HHsearch alignment for GI: 254780991 and conserved domain: TIGR03600
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=95.78 E-value=0.17 Score=29.71 Aligned_cols=63 Identities=16% Similarity=0.171 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHH----CCCCEEEEECCHHHHHHHHHHHHHHCCC
Q ss_conf 9999999988739733799863376469999999997----1997899931634689999999986789
Q gi|254780991|r 155 AAIAQLLKGIHSREKVQLLLGVTGSGKTFTMAKVIEA----MQRPAIVMAPNKILAAQLYSEFKNFFPH 219 (805)
Q Consensus 155 ~Ai~~L~~~l~~g~~~qlL~GVTGSGKTevya~lI~~----~gr~aLvLvPei~La~QL~~rfk~~Fp~ 219 (805)
T Consensus 182 ~~LD~~~~Gl~~g-~LiIiaARPsmGKTafalnia~n~A~~~g~~Vl~fSLEMs-~eql~~R~la~~s~ 248 (421)
T TIGR03600 182 PKLDRLTNGLVKG-DLIVIGARPSMGKTTLALNIAENVALREGKPVLFFSLEMS-AEQLGERLLASKSG 248 (421)
T ss_pred HHHHHHHCCCCCC-CEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCC-HHHHHHHHHHHHCC
T ss_conf 7899983699988-6899985467874599999999999866983899925799-99999999998548