HHsearch alignment for GI: 254780991 and conserved domain: pfam00271
>pfam00271 Helicase_C Helicase conserved C-terminal domain. The Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase.
Probab=99.32 E-value=3.4e-12 Score=109.90 Aligned_cols=75 Identities=37% Similarity=0.569 Sum_probs=71.9
Q ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 98635966873257645789999999973189869998458753578777117999628856744460137766543127
Q gi|254780991|r 601 YLYERNIRVRYMHSEVKTLERIEIIRDLRLGKFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSKTSLIQTIGRAAR 680 (805)
Q Consensus 601 ~~~~~~i~~~~~h~~~~~~~r~~il~~~~~g~~diLvgt~~~akGlD~p~v~lV~i~dAD~~~f~~~~~~~~q~~GRagR 680 (805)
T Consensus 2 ~l~~~g~~~~~i~g~~~~~~R~~~~~~f~~~~~~ilv~t~~~~~Gid~~~~~~vi~~~-----~~~s~~~~~Q~~GR~~R 76 (78)
T pfam00271 2 LLRKPGIKVARLHGGLSQEEREEILEDFRNGKSKVLVATDVAGRGIDLPDVNVVINYD-----LPWNPASYIQRIGRAGR 76 (78)
T ss_pred CHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEC-----CCCCHHHHHHHHCCCCC
T ss_conf 4556898599986979999999999999879973999925652567787899999978-----99698999999726877