HHsearch alignment for GI: 254780991 and conserved domain: pfam00308

Probab=95.16  E-value=0.28  Score=28.14  Aligned_cols=96  Identities=19%  Similarity=0.189  Sum_probs=52.2

Q ss_pred             CCEEEEEEECCCCHHHHHHHHHHHC-----CCCEEEEECCHH-------HHHHHHHHHHHHCCCCEEEEEEECCCCCCCC
Q ss_conf             7337998633764699999999971-----997899931634-------6899999999867898389986213444421
Q gi|254780991|r  168 EKVQLLLGVTGSGKTFTMAKVIEAM-----QRPAIVMAPNKI-------LAAQLYSEFKNFFPHNAVEYFVSYYDYYQPE  235 (805)
Q Consensus       168 ~~~qlL~GVTGSGKTevya~lI~~~-----gr~aLvLvPei~-------La~QL~~rfk~~Fp~n~V~~f~S~~~~yqpE  235 (805)
T Consensus        34 ~npl~i~G~~G~GKTHLLqA~~~~~~~~~~~~~v~yl~~~~~~~~~~~~l~~~~~~~f~~~l~~~d~l~i----D-----  104 (219)
T pfam00308        34 YNPLFIYGGVGLGKTHLLHAIGNYALRNFPNLRVVYLTSEEFLNDFVDALRDNKIEAFKKSYRNVDLLLI----D-----  104 (219)
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHH----C-----
T ss_conf             7826998899998889999999999984999828884399999988999981888899999763233652----2-----


Q ss_pred             CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHH
Q ss_conf             0155543210221035889999999999998549984998277896
Q gi|254780991|r  236 AYVPRTDTYIEKESSINEQIDRMRHSATRSLLERNDCIVVSSVSCI  281 (805)
Q Consensus       236 ay~p~~d~~i~k~~s~n~~i~~~R~~a~~~l~~~~~~IVVgsrSAI  281 (805)
T Consensus       105 ------D--i~-~l~~~~~~ee~lf~l~N~~~~~~~~lllts~~~p  141 (219)
T pfam00308       105 ------D--IQ-FLAGKEKTQEEFFHTFNALHENNKQIVLTSDRPP  141 (219)
T ss_pred             ------C--HH-HHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf             ------3--67-6568647899999999999972986999779981