HHsearch alignment for GI: 254780991 and conserved domain: pfam04851
>pfam04851 ResIII Type III restriction enzyme, res subunit.
Probab=98.65 E-value=1.8e-07 Score=74.58 Aligned_cols=58 Identities=40% Similarity=0.517 Sum_probs=50.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHHHH
Q ss_conf 843899999999887397337998633764699999999971---997899931634689999999
Q gi|254780991|r 151 GDQPAAIAQLLKGIHSREKVQLLLGVTGSGKTFTMAKVIEAM---QRPAIVMAPNKILAAQLYSEF 213 (805)
Q Consensus 151 gdQ~~Ai~~L~~~l~~g~~~qlL~GVTGSGKTevya~lI~~~---gr~aLvLvPei~La~QL~~rf 213 (805)
T Consensus 6 ~yQ~~a~~~~~~---~--~~~~i~~pTGsGKT~~~~~~i~~~~~~~~~~lvlvp~~~L~~Q~~~~~ 66 (103)
T pfam04851 6 PYQIEAIRNLLE---K--KRGLIVMATGSGKTLTAAKLIARLLKGKKKVLFLVPRKDLLEQALEEF 66 (103)
T ss_pred HHHHHHHHHHHH---C--CCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
T ss_conf 999999999996---3--986999589998799999999999846992999908299999999965