RPSBLAST alignment for GI: 254780991 and conserved domain: PRK05298

>gnl|CDD|180000 PRK05298, PRK05298, excinuclease ABC subunit B; Provisional. Length = 652
 Score = 1234 bits (3196), Expect = 0.0
 Identities = 418/654 (63%), Positives = 510/654 (77%), Gaps = 13/654 (1%)

Query: 141 FQMQTDYHPSGDQPAAIAQLLKGIHSREKVQLLLGVTGSGKTFTMAKVIEAMQRPAIVMA 200
           F++ + Y P+GDQP AI +L++GI + EK Q LLGVTGSGKTFTMA VI  +QRP +V+A
Sbjct: 5   FKLVSPYKPAGDQPQAIEELVEGIEAGEKHQTLLGVTGSGKTFTMANVIARLQRPTLVLA 64

Query: 201 PNKILAAQLYSEFKNFFPHNAVEYFVSYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRH 260
            NK LAAQLYSEFK FFP NAVEYFVSYYDYYQPEAYVP +DTYIEK+SSINE+I+R+RH
Sbjct: 65  HNKTLAAQLYSEFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSINEEIERLRH 124

Query: 261 SATRSLLERNDCIVVSSVSCIYGIGSVESYSQMIVQLKIGDSVEQKELLSSLVKQQYKRQ 320
           SAT+SLLER D IVV+SVSCIYG+GS E Y +M++ L++G  ++++ELL  LV  QY+R 
Sbjct: 125 SATKSLLERRDVIVVASVSCIYGLGSPEEYLKMVLSLRVGQEIDRRELLRRLVDLQYERN 184

Query: 321 DIGIIRGTFRVCGDSIEIFPSHLEDVAWRVSMFGNDIEEISEFYPLTGQKIRNVETIKIY 380
           DI   RGTFRV GD IEIFP++ E+ A R+  FG++IE ISEF PLTG+ +  ++ + IY
Sbjct: 185 DIDFQRGTFRVRGDVIEIFPAYYEERAIRIEFFGDEIERISEFDPLTGEVLGELDRVTIY 244

Query: 381 ANSHYVTPRPTLNTAMKYIKEELKMRLIELEKEGRLLEAQRLEQRITYDLEMLETTGSCQ 440
             SHYVTPR  L  A++ IKEEL+ RL ELEKEG+LLEAQRLEQR  YDLEML   G C 
Sbjct: 245 PASHYVTPRERLERAIESIKEELEERLKELEKEGKLLEAQRLEQRTRYDLEMLRELGYCS 304

Query: 441 SIENYSRYLTGRNPGEPPPTLFEYIPEDSLLFVDESHVTIPQISGMYRGDFHRKATLAEY 500
            IENYSR+L GR PGEPP TL +Y P+D LLF+DESHVT+PQI GMY GD  RK TL EY
Sbjct: 305 GIENYSRHLDGRKPGEPPYTLLDYFPDDFLLFIDESHVTVPQIGGMYNGDRSRKETLVEY 364

Query: 501 GFRLPSCMDNRPLRFEEWNCLRPTTIVVSATPGSWELEQCQGIIVEQIIRPTGLVDPPVE 560
           GFRLPS +DNRPL+FEE+    P TI VSATPG +ELE+  G++VEQIIRPTGL+DP +E
Sbjct: 365 GFRLPSALDNRPLKFEEFEAKVPQTIYVSATPGDYELEKSGGVVVEQIIRPTGLLDPEIE 424

Query: 561 IRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLE 620
           +R  + QV+D+  EI     +G R+L+T LTKRMAEDLT+YL E  I+VRY+HS++ TLE
Sbjct: 425 VRPTKGQVDDLLSEIRKRVAKGERVLVTTLTKRMAEDLTDYLKELGIKVRYLHSDIDTLE 484

Query: 621 RIEIIRDLRLGKFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSKTSLIQTIGRAAR 680
           R+EIIRDLRLG+FDVLVGINLLREGLDIPE  LVAILDADKEGFLRS+ SLIQTIGRAAR
Sbjct: 485 RVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 544

Query: 681 NVNSKVILYADTITKSIQLAIDETTRRREKQLEHNKKHNINPQSVKEKIMEVIDPILLED 740
           NVN KVILYAD IT S+Q AIDET RRRE Q+ +N++H I P+++K+KI +++D +    
Sbjct: 545 NVNGKVILYADKITDSMQKAIDETERRREIQIAYNEEHGITPKTIKKKIRDILDSV---- 600

Query: 741 AATTNISIDAQQLSLSKKKGKAHLKSLRKQMHLAADNLNFEEAARIRDEIKRLK 794
                     ++  LSKK+ +  +K L KQM  AA NL FEEAAR+RDEIK LK
Sbjct: 601 ---------YKKDKLSKKELEKLIKELEKQMKEAAKNLEFEEAARLRDEIKELK 645