RPSBLAST alignment for GI: 254780991 and conserved domain: COG1197

>gnl|CDD|31390 COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]. Length = 1139

 Score = 40.6 bits (95), Expect = 0.002
 Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 10/123 (8%)

Query: 593 RMAEDLTEYLYERNIRVRYMHSEVKTLERIEIIRDLRLGKFDVLVGINLLREGLDIPECG 652
           + AE L E + E   R+   H +++  E  E++ D   G++DVLV   ++  G+DIP   
Sbjct: 818 KKAERLRELVPE--ARIAVAHGQMRERELEEVMLDFYNGEYDVLVCTTIIETGIDIPNAN 875

Query: 653 LVAILDADKEGFLRSKTSLIQTIGRAARNVNSKVILYADTITKSIQLAIDETTRRREKQL 712
            + I  ADK G       L Q  GR  R   S    YA  +    Q A+ E   +R + +
Sbjct: 876 TIIIERADKFGL----AQLYQLRGRVGR---SNKQAYAYFLYPP-QKALTEDAEKRLEAI 927

Query: 713 EHN 715
              
Sbjct: 928 ASF 930