RPSBLAST alignment for GI: 254780991 and conserved domain: KOG0340

>gnl|CDD|35561 KOG0340, KOG0340, KOG0340, ATP-dependent RNA helicase [RNA processing and modification]. Length = 442

 Score = 41.9 bits (98), Expect = 8e-04
 Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 10/145 (6%)

Query: 585 ILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLERIEIIRDLRLGKFDVLVGINLLRE 644
           I++ V T R  + L+  L    +RV  +HS++   ER+  +   R     +L+  ++   
Sbjct: 257 IMIFVNTTRECQLLSMTLKNLEVRVVSLHSQMPQKERLAALSRFRSNAARILIATDVASR 316

Query: 645 GLDIPECGLVAILDADKEGFLRSKTSLIQTIGRAAR--NVNSKVILYADTITKSIQLAID 702
           GLDIP   LV   D       R     I  +GR AR       + +      + +Q AI+
Sbjct: 317 GLDIPTVELVVNHDIP-----RDPKDYIHRVGRTARAGRKGMAISIVTQRDVELLQ-AIE 370

Query: 703 ETTRRREKQLEHNKKHNINPQSVKE 727
           E     +K  E+NK        V +
Sbjct: 371 E--EIGKKLTEYNKVQRTVELYVTQ 393