HHsearch alignment for GI: 254780992 and conserved domain: PRK04424
>PRK04424 fatty acid biosynthesis transcriptional regulator; Provisional.
Probab=98.39 E-value=3.8e-05 Score=49.74 Aligned_cols=107 Identities=8% Similarity=0.149 Sum_probs=80.6
Q ss_pred ECCCCCCCEEEEEEECHHHC-CCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEE
Q ss_conf 30589983489998483342-74784308999999999999999997389832557520343214675738999999996
Q gi|254780992|r 25 CQMHSSGVLTLKIQTMPTDV-NLDGNVFGGWIMSQIDIACGIRASQLCKCRVVTKAVTELLFEKPIQVSDLVHIYTQIRK 103 (152)
Q Consensus 25 ~~~~~~~~~~l~~~~~P~~~-N~~G~lfGG~ll~~~D~aa~~~A~~~~~~~~vt~~id~i~F~~Pv~~Gd~l~~~a~V~~ 103 (152)
T Consensus 78 idle~~~~aiSil~it~emvf~~t~iargh~lfAQAnSLAv----Avi~~~~~lt~~A~VrF~rPV~~Gd~vvAkA~V~~ 153 (185)
T PRK04424 78 IDLELGRSAISILEITEEMVFSKTQIARGHHLFAQANSLAV----AVIDAELALTGKANIRFKRPVKLGERVVAKAEVVR 153 (185)
T ss_pred EEECCCCEEEEEEECCHHHEECCCCEEEHHEEHHHHHHHHH----HHCCCCEEEEEEEEEEECCCCCCCCEEEEEEEEEE
T ss_conf 66327960888898566674333873211100777763688----61399549999878999310566989999999999
Q ss_pred ECCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEECCC
Q ss_conf 2165079999999953778886089999999999998789
Q gi|254780992|r 104 IGKTSVTIYCDVWTCPRNASSDVLQKTCEATVVMVAVDEK 143 (152)
Q Consensus 104 ~G~tSm~V~V~V~~~~~~~~~~~~~~v~~a~fTfVavDe~ 143 (152)
T Consensus 154 ~~gnk~~V~V~s~V~-----~---e~VF~G~F~~~~~~~~ 185 (185)
T PRK04424 154 VTDNKYIVEVKSYVK-----D---ELVFKGKFIMYASSEE 185 (185)
T ss_pred ECCCEEEEEEEEEEC-----C---EEEEEEEEEEEEECCC
T ss_conf 729999999999989-----9---9999999999991789