HHsearch alignment for GI: 254780992 and conserved domain: TIGR02286
>TIGR02286 PaaD phenylacetic acid degradation protein PaaD; InterPro: IPR011973 This members of this family belong to the thioesterase superfamily IPR006683 from INTERPRO, and are nearly always found adjacent to other genes of the phenylacetic acid degradation pathway . Their function is currently unknown, but a role as thioesterases is suggested..
Probab=99.11 E-value=3.1e-10 Score=79.57 Aligned_cols=87 Identities=13% Similarity=0.126 Sum_probs=75.3
Q ss_pred CCCCCEEEEEEECHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEECCC
Q ss_conf 89983489998483342747843089999999999999999973898325575203432146757389999999962165
Q gi|254780992|r 28 HSSGVLTLKIQTMPTDVNLDGNVFGGWIMSQIDIACGIRASQLCKCRVVTKAVTELLFEKPIQVSDLVHIYTQIRKIGKT 107 (152)
Q Consensus 28 ~~~~~~~l~~~~~P~~~N~~G~lfGG~ll~~~D~aa~~~A~~~~~~~~vt~~id~i~F~~Pv~~Gd~l~~~a~V~~~G~t 107 (152)
T Consensus 11 ~~pg~A~v~mtVr~dmlNgHgtaHGGflF~LAD~AFA~aC--Ns~~~~aVA~~~~idflrP~~~G~~L~A~A~ev~~~gr 88 (115)
T TIGR02286 11 LGPGEARVAMTVREDMLNGHGTAHGGFLFALADSAFAYAC--NSYGDAAVAAQCTIDFLRPARAGEVLVAEAVEVSRSGR 88 (115)
T ss_pred CCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHEEE--CCCCCCEEHHHCCEEEECCCCCCCEEEEEEEEEECCCC
T ss_conf 0899458887876400043220115588888776631011--48751100100300010468999878998788414891
Q ss_pred EEEEEEEEE
Q ss_conf 079999999
Q gi|254780992|r 108 SVTIYCDVW 116 (152)
Q Consensus 108 Sm~V~V~V~ 116 (152)
T Consensus 89 tG~YDv~v~ 97 (115)
T TIGR02286 89 TGVYDVEVR 97 (115)
T ss_pred EEEEEEEEE
T ss_conf 105888998