HHsearch results for GI: 254780992 and protein with PDBid: 1s5u_A

>1s5u_A Protein YBGC; structural genomics, hypothetical protein, thioesterase fold, PSI, protein structure initiative; 1.70A {Escherichia coli} SCOP: d.38.1.1
Probab=99.03  E-value=1.7e-08  Score=68.16  Aligned_cols=112  Identities=19%  Similarity=0.247  Sum_probs=89.5

Q ss_pred             EEEEEEECHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHC--------CC-CCEEEEEEEEEEECCCCCCCEEEEEEEEEE
Q ss_conf             489998483342747843089999999999999999973--------89-832557520343214675738999999996
Q gi|254780992|r   33 LTLKIQTMPTDVNLDGNVFGGWIMSQIDIACGIRASQLC--------KC-RVVTKAVTELLFEKPIQVSDLVHIYTQIRK  103 (152)
Q Consensus        33 ~~l~~~~~P~~~N~~G~lfGG~ll~~~D~aa~~~A~~~~--------~~-~~vt~~id~i~F~~Pv~~Gd~l~~~a~V~~  103 (152)
                      -..+..+.+.|++.+|.++=+..+.|+++|.........        .+ ..++.. -.+.|++|+..||.+.+..++..
T Consensus         8 f~~~~~V~~~d~D~~ghv~~~~y~~~~e~ar~~~~~~~g~~~~~~~~~g~~~vv~~-~~~~y~~~~~~~d~i~v~~~v~~   86 (138)
T 1s5u_A            8 FRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQQALMAERVAFVVRK-MTVEYYAPARLDDMLEIQTEITS   86 (138)
T ss_dssp             EEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHTTCCHHHHHHTTCEEEEEE-EEEEECSCCCTTCEEEEEEEEEE
T ss_pred             EEEEEEECHHHCCCCCCCCHHHHHHHHHHHEECHHHCCCCHHHHHHHCCCEEEEEE-EEEEEEHHHCCCCEEEEEEEEEE
T ss_conf             89889989999389985378999888886570011204640445754780599986-40012033126842788999987


Q ss_pred             ECCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEECC-CCCCCCCCCC
Q ss_conf             216507999999995377888608999999999999878-9880227999
Q gi|254780992|r  104 IGKTSVTIYCDVWTCPRNASSDVLQKTCEATVVMVAVDE-KGNPKSIRTE  152 (152)
Q Consensus       104 ~G~tSm~V~V~V~~~~~~~~~~~~~~v~~a~fTfVavDe-~g~P~pip~e  152 (152)
                      .|++|+.+..+++  +  . ++  +.++.+..+.|.+|. .++|.|+|.|
T Consensus        87 ~~~~~~~~~~~i~--~--~-~g--~~~a~~~~~~v~~d~~~~k~~~iP~~  129 (138)
T 1s5u_A           87 MRGTSLVFTQRIV--N--A-EN--TLLNEAEVLVVCVDPLKMKPRALPKS  129 (138)
T ss_dssp             ECSSEEEEEEEEE--C--T-TC--CEEEEEEEEEEEEETTTTEECCCCHH
T ss_pred             CCCEEEEEEEEEE--E--C-CC--EEEEEEEEEEEEEECCCCCCCCCCHH
T ss_conf             5975999999999--2--5-83--79999999999999999908569999