HHsearch results for GI: 254780992 and protein with PDBid: 1yoc_A
>1yoc_A Hypothetical protein PA1835; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa PAO1} SCOP: d.38.1.5
Probab=98.95 E-value=1.1e-08 Score=69.12 Aligned_cols=99 Identities=15% Similarity=0.179 Sum_probs=70.2
Q ss_pred CCCCEEEEEEECHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC--CCEEEEEEEEEEECCCCCCCEEEEEEEEEEE--
Q ss_conf 998348999848334274784308999999999999999997389--8325575203432146757389999999962--
Q gi|254780992|r 29 SSGVLTLKIQTMPTDVNLDGNVFGGWIMSQIDIACGIRASQLCKC--RVVTKAVTELLFEKPIQVSDLVHIYTQIRKI-- 104 (152)
Q Consensus 29 ~~~~~~l~~~~~P~~~N~~G~lfGG~ll~~~D~aa~~~A~~~~~~--~~vt~~id~i~F~~Pv~~Gd~l~~~a~V~~~-- 104 (152)
.+|...++....|.+.|++|.+|||.+...+|.+++.++...... .++|..+ +++|++|++ |+ +.+.+++...
T Consensus 40 ~~g~~~~~lp~~~~~~N~~g~~HGGai~~laD~a~g~a~~~~~~~~~~~vt~~l-~i~flrpa~-g~-~~~~a~~~~~~~ 116 (147)
T 1yoc_A 40 RPGYAEVTFPKRREVLNHIGTVHAIALCNAAELAAGTMTDASIPAGHRWIPRGM-TVEYLAKAT-GD-VRAVADGSQIDW 116 (147)
T ss_dssp ETTEEEEEECCCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHSCTTEEEEEEEE-EEEECSCCC-SC-EEEEEECTTSCT
T ss_pred ECCEEEEEEECCHHHCCCCCCEEHHHHHHHHHHHHHHHHHEECCCCCEEEEEEE-EEEEEECCC-CC-EEEEEEEEEEEE
T ss_conf 799999999779999099983859999999999986788607399962787888-889970257-96-899999998217
Q ss_pred CCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEE
Q ss_conf 165079999999953778886089999999999
Q gi|254780992|r 105 GKTSVTIYCDVWTCPRNASSDVLQKTCEATVVM 137 (152)
Q Consensus 105 G~tSm~V~V~V~~~~~~~~~~~~~~v~~a~fTf 137 (152)
+++. ++.+.+... + ++ +.+.++.+||
T Consensus 117 ~~~~-~~~~~v~~~--~--~d--~~Va~a~~T~ 142 (147)
T 1yoc_A 117 QATG-NLVVPVVAY--V--DD--KPVFRAEITM 142 (147)
T ss_dssp TCCE-EEEEEEEEE--E--TT--EEEEEEEEEE
T ss_pred CCCE-EEEEEEEEE--C--CC--CEEEEEEEEE
T ss_conf 4521-799999998--4--99--6899999999