HHsearch results for GI: 254780992 and protein with PDBid: 2f41_A
>2f41_A Transcription factor FAPR; 'HOT-DOG' fold, gene regulation; 2.50A {Bacillus subtilis} SCOP: d.38.1.5
Probab=99.39 E-value=1.2e-11 Score=86.57 Aligned_cols=104 Identities=9% Similarity=0.067 Sum_probs=81.6
Q ss_pred CCCCCCCEEEEEEECHHHCCC-CCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEE
Q ss_conf 058998348999848334274-7843089999999999999999973898325575203432146757389999999962
Q gi|254780992|r 26 QMHSSGVLTLKIQTMPTDVNL-DGNVFGGWIMSQIDIACGIRASQLCKCRVVTKAVTELLFEKPIQVSDLVHIYTQIRKI 104 (152)
Q Consensus 26 ~~~~~~~~~l~~~~~P~~~N~-~G~lfGG~ll~~~D~aa~~~A~~~~~~~~vt~~id~i~F~~Pv~~Gd~l~~~a~V~~~ 104 (152)
...|....+.+..+.+++.|. .|.+|||.+++++|.+++.++ .++.+.....+++|++|++.||.|.+++++.+.
T Consensus 13 ~~~~g~~a~~~~~v~~~~~~~~~g~~hGg~i~~lad~~~~~a~----~~~~~vt~~~~i~F~~pv~~Gd~l~~~a~v~~~ 88 (121)
T 2f41_A 13 DLELDDQAISILEIKQEHVFSRNQIARGHHLFAQANSLAVAVI----DDELALTASADIRFTRQVKQGERVVAKAKVTAV 88 (121)
T ss_dssp EEETTTEEEEEEECCGGGBCSTTCBBCHHHHHHHHHHHHHHTC-------CCCEEEEEEEECSCCBTTCEEEEEEEEEEE
T ss_pred EEECCCEEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHC----CCCCEEEEEEEEEEEECCCCCCEEEEEEEEEEE
T ss_conf 9978923999971688992579981375599999999999864----986199999788996655859999999999998
Q ss_pred CCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEE
Q ss_conf 16507999999995377888608999999999999
Q gi|254780992|r 105 GKTSVTIYCDVWTCPRNASSDVLQKTCEATVVMVA 139 (152)
Q Consensus 105 G~tSm~V~V~V~~~~~~~~~~~~~~v~~a~fTfVa 139 (152)
|++...+.++++... ++ +.+.+|.|+|..
T Consensus 89 ~~~~~~~~v~v~~~~----~~--~~V~~G~f~~y~ 117 (121)
T 2f41_A 89 EKEKGRTVVEVNSYV----GE--EIVFSGRFDMYR 117 (121)
T ss_dssp CSSSSCEEEEEEEEE----TT--EEEEEEEEEEC-
T ss_pred CCEEEEEEEEEEEEE----CC--EEEEEEEEEEEE
T ss_conf 780899999999999----99--999999999999