HHsearch results for GI: 254780992 and protein with PDBid: 3bnv_A
>3bnv_A CJ0977; virulence factor, hot-DOG fold, flagella, unknown function; HET: MSE; 2.60A {Campylobacter jejuni}
Probab=99.50 E-value=1.1e-12 Score=92.76 Aligned_cols=102 Identities=16% Similarity=0.176 Sum_probs=82.8
Q ss_pred CCCEEEEEEECHHHC-CCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEE-EECCC
Q ss_conf 983489998483342-7478430899999999999999999738983255752034321467573899999999-62165
Q gi|254780992|r 30 SGVLTLKIQTMPTDV-NLDGNVFGGWIMSQIDIACGIRASQLCKCRVVTKAVTELLFEKPIQVSDLVHIYTQIR-KIGKT 107 (152)
Q Consensus 30 ~~~~~l~~~~~P~~~-N~~G~lfGG~ll~~~D~aa~~~A~~~~~~~~vt~~id~i~F~~Pv~~Gd~l~~~a~V~-~~G~t 107 (152)
.|...++..+.|++. |.+|.+|||.+++++|.+++.++ ....++|+.+ +++|++|++.||.|.++|++. +.|++
T Consensus 44 ~G~a~~~l~~~~~~~~n~~G~vHGG~~~alaD~a~~~a~---~~~~~vT~~~-~i~fl~p~~~G~~l~a~a~vi~~~~~~ 119 (152)
T 3bnv_A 44 KNYAKSILITTSEMVADDQGLIFDAFIFAAANYVAQASI---NKEFSVIIGS-KCFFYAPLKLGDVLELEAHALFDETSK 119 (152)
T ss_dssp TTEEEEEEECCGGGBSSTTCBBCHHHHHHHHHHHHHHHH---CCSSEEEEEE-EEEECSCCBTTCEEEEEEEECCCSSCS
T ss_pred CCEEEEEEECCHHHHCCCCCEECHHHHHHHHHHHHHHHC---CCCCCCHHHE-EEEECCCCCCCCEEEEEEEEEEECCCE
T ss_conf 998999998489992489980715686789999977542---6887051110-015603678999999999999989974
Q ss_pred EEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEECCC
Q ss_conf 079999999953778886089999999999998789
Q gi|254780992|r 108 SVTIYCDVWTCPRNASSDVLQKTCEATVVMVAVDEK 143 (152)
Q Consensus 108 Sm~V~V~V~~~~~~~~~~~~~~v~~a~fTfVavDe~ 143 (152)
...+.++++.+ + ..+.+|.|+++.+|+.
T Consensus 120 ~~~v~v~~~~~------~--~~V~~gtf~~~v~~k~ 147 (152)
T 3bnv_A 120 KRDVKVVGHVK------E--IKMFEGTIQVVSTDEH 147 (152)
T ss_dssp EEEEEEEEEET------T--EEEEEEEEEEEECSSC
T ss_pred EEEEEEEEEEC------C--EEEEEEEEEEEEECCC
T ss_conf 99999999889------9--9999999999997660