HHSEARCH alignment of GI: 254780992 and SCOP domain: d1sh8a_

Alignment
>d1sh8a_ d.38.1.5 (A:) Hypothetical protein PA5026 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=98.87  E-value=5.7e-09  Score=69.51  Aligned_cols=104  Identities=14%  Similarity=0.200  Sum_probs=74.9

Q ss_pred             CCCCCEEEEEEECHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC---CCEEEEEEEEEEECCCCCCCEEEEE------
Q ss_conf             8998348999848334274784308999999999999999997389---8325575203432146757389999------
Q gi|254780992|r   28 HSSGVLTLKIQTMPTDVNLDGNVFGGWIMSQIDIACGIRASQLCKC---RVVTKAVTELLFEKPIQVSDLVHIY------   98 (152)
Q Consensus        28 ~~~~~~~l~~~~~P~~~N~~G~lfGG~ll~~~D~aa~~~A~~~~~~---~~vt~~id~i~F~~Pv~~Gd~l~~~------   98 (152)
                      -.+|...++.-.-| +.|++|++|||.+++++|.+++.++...+.+   .++|+.+ +++|++|+..+..++++      
T Consensus        30 ~~~g~~~l~~p~~~-~~N~~G~~hGG~~~tl~D~a~~~a~~~~~~~~~~~~~t~~~-~i~f~~pa~g~~~~~~~~~~~~~  107 (153)
T d1sh8a_          30 LEPGYVRLRMPGAG-NENHIGSMYAGALFTLAELPGGALFLTSFDSARFYPIVKEM-TLRFRRPAKGDIRVEARLDAERI  107 (153)
T ss_dssp             EETTEEEEEECSTT-CBCTTSSBCHHHHHHHHHTHHHHHHHHHSCTTTEEEEEEEE-EEEECSCCCSCEEEEEECCHHHH
T ss_pred             EECCEEEEEEECCH-HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE-EEEEECCCCCCEEEEEEECHHHH
T ss_conf             96999999998555-42898818999999999999999999857866523562000-12552145675799999668987


Q ss_pred             ----EEEEEECCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEE
Q ss_conf             ----999962165079999999953778886089999999999998
Q gi|254780992|r   99 ----TQIRKIGKTSVTIYCDVWTCPRNASSDVLQKTCEATVVMVAV  140 (152)
Q Consensus        99 ----a~V~~~G~tSm~V~V~V~~~~~~~~~~~~~~v~~a~fTfVav  140 (152)
                          +++.+.||+...+.++++.     .++  ++++++..+|.-.
T Consensus       108 ~~~~~~~~~~gr~~~~~~v~i~d-----~~g--~lvA~~~~~~~i~  146 (153)
T d1sh8a_         108 RQLETEAGERGKAEYSLELQLTD-----EQG--EVVAESAALYQLR  146 (153)
T ss_dssp             HHHHHHHHHHSEEEEEEEEEEEC-----TTC--CEEEEEEEEEEEE
T ss_pred             HHHHHHEEECCCEEEEEEEEEEC-----CCC--CEEEEEEEEEEEC
T ss_conf             66542024457379999999994-----999--9999999999997


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein PA5026
species: Pseudomonas aeruginosa [TaxId: 287]