HHSEARCH alignment of GI: 254780992 and SCOP domain: d2f41a1

Alignment
>d2f41a1 d.38.1.5 (A:73-183) Transcription factor FapR, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=99.40  E-value=3.3e-12  Score=88.47  Aligned_cols=102  Identities=9%  Similarity=0.059  Sum_probs=79.0

Q ss_pred             CCCCCCCEEEEEEECHHHCCC-CCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEE
Q ss_conf             058998348999848334274-7843089999999999999999973898325575203432146757389999999962
Q gi|254780992|r   26 QMHSSGVLTLKIQTMPTDVNL-DGNVFGGWIMSQIDIACGIRASQLCKCRVVTKAVTELLFEKPIQVSDLVHIYTQIRKI  104 (152)
Q Consensus        26 ~~~~~~~~~l~~~~~P~~~N~-~G~lfGG~ll~~~D~aa~~~A~~~~~~~~vt~~id~i~F~~Pv~~Gd~l~~~a~V~~~  104 (152)
                      ..+|....+.+..+.|++.|. .|.+|||.+++++|.+++.++   .....+|+ ..+++|++|++.||.|.++|++.+.
T Consensus         8 ~~~~g~~a~~~~~v~~~~~~~~~g~~hGg~i~slad~~~~~~~---~~~~~vt~-~~~i~f~~pv~~Gd~l~a~a~v~~~   83 (111)
T d2f41a1           8 DLELDDQAISILEIKQEHVFSRNQIARGHHLFAQANSLAVAVI---DDELALTA-SADIRFTRQVKQGERVVAKAKVTAV   83 (111)
T ss_dssp             EEETTTEEEEEEECCGGGBCSTTCBBCHHHHHHHHHHHHHHTC------CCCEE-EEEEEECSCCBTTCEEEEEEEEEEE
T ss_pred             EEECCCEEEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHC---CCCCEEEE-EEEEEEEECCCCCCEEEEEEEEEEE
T ss_conf             9828955999998678990244488644151999999998642---88738999-9878998721557349999999998


Q ss_pred             CCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEE
Q ss_conf             165079999999953778886089999999999
Q gi|254780992|r  105 GKTSVTIYCDVWTCPRNASSDVLQKTCEATVVM  137 (152)
Q Consensus       105 G~tSm~V~V~V~~~~~~~~~~~~~~v~~a~fTf  137 (152)
                      |++...+.++++...    ++  +.+.+|.|++
T Consensus        84 ~~~~~~~~v~v~~~~----~~--~~V~~G~f~~  110 (111)
T d2f41a1          84 EKEKGRTVVEVNSYV----GE--EIVFSGRFDM  110 (111)
T ss_dssp             CSSSSCEEEEEEEEE----TT--EEEEEEEEEE
T ss_pred             CCCEEEEEEEEEEEE----CC--EEEEEEEEEE
T ss_conf             783799999999998----99--9999999997


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Transcription factor FapR, C-terminal domain
species: Bacillus subtilis [TaxId: 1423]