HHsearch alignment for GI: 254780993 and conserved domain: COG1971
>COG1971 Predicted membrane protein [Function unknown].
Probab=91.68 E-value=0.69 Score=22.30 Aligned_cols=79 Identities=10% Similarity=0.084 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99989999999967765788752885535666545676469999977640366---310223589999999999721578
Q gi|254780993|r 70 AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD---KSFLNKAFAIFCLLMGILMLKRDR 146 (279)
Q Consensus 70 AvgTsl~~~~~ts~~~~~~~~k~~~i~~~~~~~l~~~~~~Ga~lGa~l~~~i~---~~~l~~~f~v~ll~~a~~~~~~~~ 146 (279)
T Consensus 10 A~alsmDAFav~l~~G~~~~k~~~~~~L~ia~~fG~f~~i~pliG~~~g~~~s~~i~~~~~wigf~lL~~lG~~mI~e~f 89 (190)
T COG1971 10 AIALSMDAFAVSLGKGLAKHKIRFKEALVIALIFGVFQAIMPLIGWFIGKFLSTFIAEWAHWIGFVLLIILGLKMIIEGF 89 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99972169999998315642510899999999999999999999999999999999999999999999999999999980
Q ss_pred CC
Q ss_conf 77
Q gi|254780993|r 147 LY 148 (279)
Q Consensus 147 ~~ 148 (279)
T Consensus 90 ~~ 91 (190)
T COG1971 90 KN 91 (190)
T ss_pred CH
T ss_conf 35