HHsearch alignment for GI: 254780993 and conserved domain: TIGR00427
>TIGR00427 TIGR00427 conserved hypothetical protein TIGR00427; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. .
Probab=94.92 E-value=0.19 Score=25.33 Aligned_cols=167 Identities=15% Similarity=0.092 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-CC
Q ss_conf 99967765788752885535666545676469999977640366--3102235899999999997215787743333-23
Q gi|254780993|r 79 APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD--KSFLNKAFAIFCLLMGILMLKRDRLYCERKF-PD 155 (279)
Q Consensus 79 ~~ts~~~~~~~~k~~~i~~~~~~~l~~~~~~Ga~lGa~l~~~i~--~~~l~~~f~v~ll~~a~~~~~~~~~~~~~~~-~~ 155 (279)
T Consensus 29 iFi~LTe~y~~~~R~~i~kkA~I~~~~IL~~f~~fG~~Il~~FGIsIdafriAGGILlf~Ia~dml~gK~~~~~~~k~~E 108 (206)
T TIGR00427 29 IFISLTESYTAEEREKIAKKAVISAFVILLIFLLFGDLILKYFGISIDAFRIAGGILLFLIALDMLSGKESEKKKHKHDE 108 (206)
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHH
T ss_conf 22114888877899999899999999999999987457886608727898998899999999999840255045204134
Q ss_pred CCH---HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
Q ss_conf 401---33211567667666521126689999998489844634666788866677899999853876435745100189
Q gi|254780993|r 156 NYV---KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232 (279)
Q Consensus 156 ~~~---~~~~g~~~G~~sgl~GiGGG~l~vp~l~~~g~~~~~avgTS~~~~~~~a~~g~i~~~~~G~~~~~~~~~~~G~v 232 (279)
T Consensus 109 ~~e~~~~dsI~v~PLA~PL~aGP--GaIt~~mvl~---~~~~~I~~k~~V~l~Ial~~~~~~l~---------------- 167 (206)
T TIGR00427 109 KEESKEIDSIAVVPLALPLIAGP--GAITATMVLI---AKASDIGEKFLVVLAIALVLLITFLL---------------- 167 (206)
T ss_pred HHHHHHHHHHCCCCHHHHHCCCC--CHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHHHH----------------
T ss_conf 78644654102221245420365--1699999999---70330899999999999999999999----------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999830899999999999999999872
Q gi|254780993|r 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278 (279)
Q Consensus 233 ~~~~~~~i~~~s~~ga~iGa~l~~~l~~~~lk~~f~i~l~~v~~~m 278 (279)
T Consensus 168 ------------~~~~~~i~~~lg~~Gin~~tRimGL~L~AiaV~~ 201 (206)
T TIGR00427 168 ------------FLYAAFIIRRLGRTGINVITRIMGLLLAAIAVEF 201 (206)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ------------9876899988623018899999999999988887