BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780993|ref|YP_003065406.1| hypothetical protein
CLIBASIA_04470 [Candidatus Liberibacter asiaticus str. psy62]
         (279 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780993|ref|YP_003065406.1| hypothetical protein CLIBASIA_04470 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040670|gb|ACT57466.1| hypothetical protein CLIBASIA_04470 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 279

 Score =  554 bits (1428), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 279/279 (100%), Positives = 279/279 (100%)

Query: 1   MYDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG 60
           MYDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG
Sbjct: 1   MYDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG 60

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
           IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH
Sbjct: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
           VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF
Sbjct: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
           TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII
Sbjct: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA
Sbjct: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279


>gi|315122484|ref|YP_004062973.1| hypothetical protein CKC_03680 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495886|gb|ADR52485.1| hypothetical protein CKC_03680 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 260

 Score =  353 bits (905), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 186/259 (71%), Positives = 225/259 (86%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           DYI  II+ASF+SG  SG+FGVGGGL MVP+L+K FQLMG+DDSI  +VAMGTSLGVIAP
Sbjct: 2   DYIYYIIIASFISGAFSGIFGVGGGLAMVPILNKVFQLMGVDDSISTYVAMGTSLGVIAP 61

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS MSFMEHRRH  I+MKI+KDWI V+P+T +VTS+M++H+D+SFLNK+F+IFC L+G L
Sbjct: 62  TSFMSFMEHRRHSEIDMKIVKDWIIVIPVTVIVTSIMVTHIDQSFLNKSFSIFCSLIGCL 121

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           ML +DR   ++ FPDNY+KY WG+V GFLSG+LGVGGG+F  +LMLFYG+SIYKATA S+
Sbjct: 122 MLVKDRFCYKKSFPDNYLKYFWGVVIGFLSGSLGVGGGVFCTILMLFYGSSIYKATAISS 181

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            VS LI+FP +LVRIYSGWG+ GLPP S+GFVNIGA+  ILPISIL+TP  TKLSYMIGK
Sbjct: 182 AVSVLISFPGVLVRIYSGWGVEGLPPLSIGFVNIGAIFFILPISILVTPFFTKLSYMIGK 241

Query: 261 KYLTIGFSMIMFTTSFVFA 279
           KYL+IGFSM+MFTTSF+FA
Sbjct: 242 KYLSIGFSMLMFTTSFLFA 260


>gi|163759722|ref|ZP_02166807.1| hypothetical protein HPDFL43_10222 [Hoeflea phototrophica DFL-43]
 gi|162283319|gb|EDQ33605.1| hypothetical protein HPDFL43_10222 [Hoeflea phototrophica DFL-43]
          Length = 272

 Score =  187 bits (476), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 92/238 (38%), Positives = 151/238 (63%), Gaps = 1/238 (0%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           +GGG ++VPV  + F L+G+D+++ MH+A+GTSL +I PTS+ S + H+  G++++++LK
Sbjct: 30  IGGGAILVPVFYQVFGLLGVDEAVRMHLAIGTSLAIIVPTSIRSLLSHKLRGSVDLELLK 89

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKY 160
            WI  +P+  V  SL+ + V    L   FAI  +++GI M L R+        P N ++ 
Sbjct: 90  SWIVPVPLGVVAASLIAASVSSGGLRAIFAIISVIVGIRMLLNRESWRLGADLPPNPMRA 149

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
             G+V G LS  +G+GGG+  N  M  +G  +++A ATSAGV  LI+ P L   +++G G
Sbjct: 150 AVGVVLGLLSALMGIGGGVLNNTFMTLFGRPVHQAVATSAGVGVLISIPGLFGYVWAGLG 209

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +GLPP+S G+VN  AV +I+PI++LI PL  +L++ + K+ L +GF + +   +  F
Sbjct: 210 ASGLPPFSTGYVNWIAVALIIPITLLIAPLGVRLAHSLDKRQLEVGFGIFILLVAARF 267


>gi|328544450|ref|YP_004304559.1| Membrane protein [polymorphum gilvum SL003B-26A1]
 gi|326414192|gb|ADZ71255.1| Membrane protein [Polymorphum gilvum SL003B-26A1]
          Length = 276

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 152/248 (61%), Gaps = 1/248 (0%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L+G+FG+GGG V+VPVL +   ++G+D+S+ MHV++ TSLG+I PTS+ SF+ H++
Sbjct: 23  VAGLLAGMFGIGGGAVLVPVLYQFLAVLGVDESVRMHVSVATSLGIIVPTSIRSFLAHKK 82

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-KRDRLYCE 150
            G ++M++LK W   +P   VV SL+ + V    L   FA+   ++G+ M+  R+     
Sbjct: 83  RGAVDMELLKTWAIPVPAGVVVASLVAASVSGDGLKGIFAVIAAVVGLRMIFNRESWRLG 142

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPA 210
              P   ++ + G + GF S  +G+GGG+  N  M  YG  I++A ATS+G   LI+ P 
Sbjct: 143 DDIPGFPIRPLCGALIGFFSTLMGIGGGVMNNTFMTLYGRPIHQAVATSSGTGVLISVPG 202

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           ++  I++GWG   LPP+S G+VN+  V +I+PI+ L  PL  ++++ + ++ +   F   
Sbjct: 203 VIGMIWAGWGAAALPPFSAGYVNLLGVALIIPITTLTAPLGVRIAHALKRRTMEYAFGTF 262

Query: 271 MFTTSFVF 278
           +   +  F
Sbjct: 263 LLIVAARF 270


>gi|227822290|ref|YP_002826261.1| protein of unknown function DUF81 [Sinorhizobium fredii NGR234]
 gi|227341290|gb|ACP25508.1| protein of unknown function DUF81 [Sinorhizobium fredii NGR234]
          Length = 273

 Score =  179 bits (454), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 99/248 (39%), Positives = 156/248 (62%), Gaps = 1/248 (0%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           +SG L+GLFGVGGG ++VPV  + F L+G+DD++ MH+++GTS  +I PTSV SF+ H R
Sbjct: 20  VSGVLAGLFGVGGGAILVPVFFQVFGLLGVDDAVRMHLSVGTSTAIIVPTSVRSFLLHYR 79

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-KRDRLYCE 150
            G ++  +L++WI  +P+  ++ +++ ++V    L   FA+  L + + M+  R      
Sbjct: 80  RGVVDTALLRNWILAIPLGAILATVIAAYVSSETLRLIFAMIALAVALRMIFNRATWRLG 139

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPA 210
           R  P N + ++ G+V G LSG +GVGGG+  N  M  Y   I++A ATS+GV  LI+ P 
Sbjct: 140 RDLPKNPITWLVGVVIGVLSGLMGVGGGVLNNTFMTLYNRPIHEAIATSSGVGVLISIPG 199

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           L   I++G G  GLPP S GFVN  AV +I+P+S+L+ PL  +L++ + ++ L  GF + 
Sbjct: 200 LFGYIWAGSGEPGLPPLSTGFVNWIAVALIIPVSLLVAPLGVRLAHAMDRRQLEAGFGIF 259

Query: 271 MFTTSFVF 278
           M   +  F
Sbjct: 260 MILIALRF 267


>gi|254473459|ref|ZP_05086856.1| membrane protein [Pseudovibrio sp. JE062]
 gi|211957575|gb|EEA92778.1| membrane protein [Pseudovibrio sp. JE062]
          Length = 273

 Score =  179 bits (453), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 89/255 (34%), Positives = 153/255 (60%), Gaps = 1/255 (0%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I +  L+G L+GLFG+GGG ++VP+L      +G+D    +H+++ +SLGVI PTS+ S
Sbjct: 15  LIASGALAGFLAGLFGIGGGAILVPILVTILTEVGVDPDAVVHISVASSLGVIVPTSLRS 74

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-KR 144
           F  H++ G +++ +LK WI  +PI  ++ S + + V    L   FA+   ++ + ML  R
Sbjct: 75  FFAHKKKGAVDLSLLKSWIIPVPIGVLLASYVAALVSGDTLKGIFAVIAFVVAMRMLFNR 134

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
           +        P N V+ + G++ GF S  +G+GGG+  N  M  +G  I++A ATS+GV  
Sbjct: 135 ESWKLGSDIPGNPVRALIGVMIGFFSTLMGIGGGVMNNTFMTLFGRPIHQAVATSSGVGV 194

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           LI+ PA+   + +GWG   LPP+S+G++N+ A+ +I+PI+I + PL    ++ + K+ L 
Sbjct: 195 LISIPAVFGMVAAGWGAPNLPPFSVGYINLLAIALIIPITIYVAPLGAHFAHNLPKRKLE 254

Query: 265 IGFSMIMFTTSFVFA 279
           + F + +      FA
Sbjct: 255 LAFGVFLLIACARFA 269


>gi|310816083|ref|YP_003964047.1| putative transmembrane protein [Ketogulonicigenium vulgare Y25]
 gi|308754818|gb|ADO42747.1| putative transmembrane protein [Ketogulonicigenium vulgare Y25]
          Length = 279

 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 160/268 (59%), Gaps = 3/268 (1%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           L  D ++  I  +++A  LSG ++GLFG+GGG + VPVL + F+L+G+D ++CM +A+GT
Sbjct: 6   LGLDALIPMIGALVIAGALSGLMAGLFGIGGGAISVPVLYEIFRLIGVDPAVCMPLAVGT 65

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           SL +I PTS  S   H   GT++M++++ W   + +   + +++  + + +     F I 
Sbjct: 66  SLAIIVPTSFTSARGHYLRGTLDMELIRIWAVPVILGVAIGAVIARYANAAVFQIVFVIV 125

Query: 134 CLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
             +  + +L    R       P  +   I+G++ G LS  +G+GGG  TNL++  YG  I
Sbjct: 126 ASVNALKLLSGGARWQIADSLPGRFAIRIYGLIIGLLSSLMGIGGGTITNLVLTLYGIDI 185

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +A +T+AGV  LIA P  +  + +GWG  GLPP +LG+V+  A+++ +P ++L+TP+  
Sbjct: 186 RRAISTAAGVGTLIALPGAIGYVIAGWGKPGLPPDALGYVSTLALVLTVPTTVLVTPIGV 245

Query: 253 KLSYMIGKKYLTIGFSMIMFTTS--FVF 278
            L++ + ++ L + F + + T S  F+F
Sbjct: 246 WLAHTLPRRTLEVCFGLFLLTVSGRFIF 273


>gi|299134803|ref|ZP_07027995.1| protein of unknown function DUF81 [Afipia sp. 1NLS2]
 gi|298590613|gb|EFI50816.1| protein of unknown function DUF81 [Afipia sp. 1NLS2]
          Length = 284

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 154/270 (57%), Gaps = 9/270 (3%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +++    +I    L+G L+GLFGVGGG ++VPVL + F++M +     M + +GTSL +I
Sbjct: 9   IIELAIALIAVGALAGFLAGLFGVGGGAILVPVLYELFRIMDVPLETRMPLCVGTSLAII 68

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            PT+V S++EHRRHG+++M IL+ W   + I     SL+  +  +      F        
Sbjct: 69  IPTAVRSYLEHRRHGSVDMNILRTWTIPILIGVTAGSLIARYAPEQVFKYVFVAVAWSAA 128

Query: 139 I-LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           + L+L +D       FP   +  I+G + G LS  +G+GGG+F+NLLM  YG SI+++ A
Sbjct: 129 VRLILGKDSWKIGDAFPTGPLMRIYGFIIGILSTLMGIGGGLFSNLLMTMYGRSIHQSVA 188

Query: 198 TSAGVSALIAFPALLVRIYSGW-GLNGLP-------PWSLGFVNIGAVLIILPISILITP 249
           TS+G++ LI+ P  +  IY+GW      P       P ++G++++   ++++P S+L  P
Sbjct: 189 TSSGIAVLISIPGTIGYIYAGWPAAAKFPATTILQFPLAIGYISLIGAIMVMPSSLLTAP 248

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              K ++++ K+ L I F + +F     FA
Sbjct: 249 FGAKAAHLMSKRALEIAFGLYLFIMGSRFA 278


>gi|325293298|ref|YP_004279162.1| hypothetical protein AGROH133_07076 [Agrobacterium sp. H13-3]
 gi|325061151|gb|ADY64842.1| hypothetical protein AGROH133_07076 [Agrobacterium sp. H13-3]
          Length = 273

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/233 (39%), Positives = 146/233 (62%), Gaps = 1/233 (0%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
           FG+GGG V+VPV    F L+ + +++ MH+++GTSL +I PTS+ SF+ HR+ G +++ +
Sbjct: 28  FGIGGGAVLVPVFYHVFGLLDVPEAVRMHLSLGTSLAIIVPTSIRSFLTHRQKGAVDIDL 87

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-KRDRLYCERKFPDNYV 158
           LK WI  +P+ T++ S++ +H     L   FA   L +   M+  R   +     P N V
Sbjct: 88  LKGWIVAVPLGTILASVVAAHASSVALRLIFAFIALALAFRMIFNRASWHLGSDLPKNPV 147

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           +++ G   G LSG +GVGGG+  N  M  YG +I++A ATS+GV  LI+ P LL  I++G
Sbjct: 148 RFLVGTGIGLLSGLMGVGGGVMNNTFMTLYGRTIHQAVATSSGVGVLISLPGLLGYIWAG 207

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           WG  GLPP+S GF+N  AV +++PI++++ P   +L++ + KK L   F + +
Sbjct: 208 WGDAGLPPFSTGFINWIAVALLIPITLVVAPYGARLAHALSKKQLERAFGVFL 260


>gi|15889204|ref|NP_354885.1| hypothetical protein Atu1908 [Agrobacterium tumefaciens str. C58]
 gi|15157027|gb|AAK87670.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 273

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/233 (39%), Positives = 145/233 (62%), Gaps = 1/233 (0%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
           FG+GGG V+VPV    F L+ + +++ MH+++GTSL +I PTSV SF+ HR+ G +++ +
Sbjct: 28  FGIGGGAVLVPVFYHVFGLLDVPEAVRMHLSLGTSLAIIVPTSVRSFLTHRQKGAVDIDL 87

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-KRDRLYCERKFPDNYV 158
           LK WI  +P+ T++ S++ ++     L   FA   L +   M+  R         P N  
Sbjct: 88  LKGWIVAVPLGTILASVVAAYASSVALRLIFAFIALALAFRMIVNRASWQLGSDLPKNPA 147

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           +++ G   G LSG +GVGGG+  N  M  YG +I++A ATS+GV  LI+ P LL  I++G
Sbjct: 148 RFLVGTGIGLLSGLMGVGGGVMNNTFMTLYGRTIHQAVATSSGVGVLISLPGLLGYIWAG 207

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           WG  GLPP+S GF+N  AV++++PI++L+ P   +L++ + KK L   F + +
Sbjct: 208 WGNAGLPPFSTGFINWIAVVLLIPITLLVAPYGVRLAHALSKKQLERAFGVFL 260


>gi|90418089|ref|ZP_01226001.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337761|gb|EAS51412.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 274

 Score =  158 bits (400), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 138/239 (57%), Gaps = 1/239 (0%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           +GGG + VPVL + F+ +G+   + MH+A+G+SL +I PTS+ S + H R G ++ ++LK
Sbjct: 32  IGGGAIFVPVLYQTFEELGVSHEVSMHLAIGSSLAIIVPTSIRSLVSHWRRGVVDWRLLK 91

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKY 160
           +W+  +P+  +  +++ +      L   FA   L++G+ L+  +  +   ++ P    + 
Sbjct: 92  EWVVAIPLGAIAGAMVAAAASSGELRGIFAALALVLGLKLVFGKVPMSFGKQLPGLAGRS 151

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
           + G + G LS  +G+GGG+  N  M  Y   + +A ATSAGV  LI+ P LL     GWG
Sbjct: 152 VAGFLIGLLSSLMGIGGGVLNNTFMTLYNRPMIEAVATSAGVGVLISVPGLLSYAIGGWG 211

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              LP +S+GFV++ AVL+I P SIL  PL   L++ + ++ L +GF   +   +  FA
Sbjct: 212 DPLLPAYSIGFVSLAAVLLIAPASILAVPLGAALAHRLTRRQLELGFGAFLLIVAARFA 270


>gi|27375621|ref|NP_767150.1| hypothetical protein bll0510 [Bradyrhizobium japonicum USDA 110]
 gi|27348758|dbj|BAC45775.1| bll0510 [Bradyrhizobium japonicum USDA 110]
          Length = 287

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 147/272 (54%), Gaps = 9/272 (3%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           LM  L    +V+   L+I    LSG L+G+FG+GGG ++VPV  + F++ G+   + M +
Sbjct: 2   LMAGLDIKEIVELALLLIATGALSGFLAGVFGIGGGAILVPVFYECFRIAGVPLEVRMPL 61

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
            +GTSL VI PTS+ SF  H + G ++M IL+ W   + I  V  S++  H  +      
Sbjct: 62  CVGTSLAVIIPTSIRSFQAHYKRGAVDMAILRVWWLPIVIGVVAGSVVARHAPERLFKIV 121

Query: 130 FAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F        + L+  R+        P   V  I+G   G LS  +G+GGG+F+NLLM FY
Sbjct: 122 FVCVAWSAAVRLIFARETWKLGDDLPKGPVMRIYGFCVGILSTLMGIGGGLFSNLLMTFY 181

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP--------PWSLGFVNIGAVLII 240
           G  I++A ATS+ ++ LI+ P  L  IY+GW              P++LG+V++   +++
Sbjct: 182 GRPIHQAVATSSALAVLISIPGALGYIYAGWPAAASYPAVAALQVPFALGYVSLIGAVLV 241

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           +P+S++  PL  + ++ + K+ L   F   +F
Sbjct: 242 MPMSLVTAPLGVRAAHAMSKRTLETAFGCYLF 273


>gi|77465186|ref|YP_354689.1| hypothetical protein RSP_3172 [Rhodobacter sphaeroides 2.4.1]
 gi|77389604|gb|ABA80788.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
          Length = 277

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 140/257 (54%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  LS   +   I  +  A  ++G L+GLFG+GGG + VPV  + F+L+G D  + M +A
Sbjct: 1   MELLSSGTIFALIAALAAAGAVTGFLAGLFGIGGGAISVPVFFEVFRLLGHDPEVAMPLA 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL VI PTS++S   H + GT++  +LK W   + I   + S + S          F
Sbjct: 61  VGTSLAVIVPTSLVSAYGHLQRGTVDKDLLKVWALPILIGVALGSALASVAPPRLFQGVF 120

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
               LL+   +L   +       P   +  ++G V G +S  +G+GGG  +NL++  +G 
Sbjct: 121 VCVALLIATKLLTGGKWRLSEGLPRRAILRLYGAVVGLVSALMGIGGGAVSNLILTLHGV 180

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            I++A +T+AGV  LIA P  +  + +GWG   LPP +LGFV++   L+ +P SIL T  
Sbjct: 181 PIHRAVSTAAGVGVLIAVPGTIGYMIAGWGRPDLPPDALGFVSVATFLLTIPTSILTTRF 240

Query: 251 ATKLSYMIGKKYLTIGF 267
              L++ + K++L   F
Sbjct: 241 GVALAHRLSKEWLARSF 257


>gi|221369184|ref|YP_002520280.1| hypothetical protein RSKD131_3347 [Rhodobacter sphaeroides KD131]
 gi|221162236|gb|ACM03207.1| Hypothetical Protein RSKD131_3347 [Rhodobacter sphaeroides KD131]
          Length = 277

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 140/257 (54%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  LS   +   I  +  A  ++G L+GLFG+GGG + VPV  + F+L+G D  + M +A
Sbjct: 1   MELLSSGTIFALIAALAAAGAVTGFLAGLFGIGGGAISVPVFFEVFRLLGHDPEVAMPLA 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL VI PTS++S   H + GT++  +LK W   + I   + S + S          F
Sbjct: 61  VGTSLAVIVPTSLVSAYGHLQRGTVDKDLLKVWALPILIGVALGSALASVAPPRLFQGVF 120

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
               LL+   +L   +       P   +  ++G V G +S  +G+GGG  +NL++  +G 
Sbjct: 121 VCVALLIATKLLTGGKWRLSEGLPRRAILRLYGAVVGLVSALMGIGGGAVSNLILTLHGV 180

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            I++A +T+AGV  LIA P  +  + +GWG   LPP +LGFV++   L+ +P SIL T  
Sbjct: 181 PIHRAVSTAAGVGVLIAVPGTIGYMIAGWGRPDLPPDALGFVSVATFLLTIPTSILTTRF 240

Query: 251 ATKLSYMIGKKYLTIGF 267
              L++ + K++L   F
Sbjct: 241 GVALAHRLSKEWLARSF 257


>gi|332560791|ref|ZP_08415109.1| hypothetical protein RSWS8N_17134 [Rhodobacter sphaeroides WS8N]
 gi|332274589|gb|EGJ19905.1| hypothetical protein RSWS8N_17134 [Rhodobacter sphaeroides WS8N]
          Length = 277

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 140/257 (54%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  LS   +   I  +  A  ++G L+GLFG+GGG + VPV  + F+L+G D  + M +A
Sbjct: 1   MELLSSGTIFALIAALAAAGAVTGFLAGLFGIGGGAISVPVFFEVFRLLGHDPEVAMPLA 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL VI PTS++S   H + GT++  +LK W   + +   + S + S          F
Sbjct: 61  VGTSLAVIVPTSLVSAYGHLQRGTVDKDLLKVWALPILVGVALGSALASVAPPRLFQGVF 120

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
               LL+   +L   +       P   +  ++G V G +S  +G+GGG  +NL++  +G 
Sbjct: 121 VCVALLIATKLLTGGKWRLSEGLPRRAILRLYGAVVGLVSALMGIGGGAVSNLILTLHGV 180

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            I++A +T+AGV  LIA P  +  + +GWG   LPP +LGFV++   L+ +P SIL T  
Sbjct: 181 PIHRAVSTAAGVGVLIAIPGTIGYMIAGWGRPDLPPDALGFVSVATFLLTIPTSILTTRF 240

Query: 251 ATKLSYMIGKKYLTIGF 267
              L++ + K++L   F
Sbjct: 241 GVALAHRLSKEWLARSF 257


>gi|114707272|ref|ZP_01440169.1| hypothetical protein FP2506_03600 [Fulvimarina pelagi HTCC2506]
 gi|114537153|gb|EAU40280.1| hypothetical protein FP2506_03600 [Fulvimarina pelagi HTCC2506]
          Length = 275

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 134/239 (56%), Gaps = 1/239 (0%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           +GGG + VPVL + +Q + + +++ MH+A+GTS+  I PTS+ S   H     ++ ++LK
Sbjct: 33  IGGGAIYVPVLYQLYQWLQVPEAVAMHLAVGTSIATIVPTSLRSLYAHLSREAVDRRLLK 92

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKY 160
           +W   +P  ++  + + +      L   FA    ++ + L+  R      +  P    + 
Sbjct: 93  EWCIAVPAGSIAGAFLAASASSVTLRAIFAALAFVISLKLLFGRIEWTLGKDLPGKAGRS 152

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
           + G++ GF S  +G+GGG+  N  M  YG  + ++ ATSAGV ALIA P +   I+ GWG
Sbjct: 153 LAGVIIGFSSALIGIGGGVLNNTFMTLYGRPMIQSVATSAGVGALIAVPGVATYIFGGWG 212

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              LPP+SLGFV++  ++++ P+S++  P    L++ + ++ L IGF + +   +  FA
Sbjct: 213 DPLLPPFSLGFVSLTTLVVVAPMSLIAVPFGAALAHKLSRRTLEIGFGIFLVLVALRFA 271


>gi|209883443|ref|YP_002287300.1| membrane protein [Oligotropha carboxidovorans OM5]
 gi|209871639|gb|ACI91435.1| membrane protein [Oligotropha carboxidovorans OM5]
          Length = 284

 Score =  152 bits (385), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 147/256 (57%), Gaps = 9/256 (3%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G  +GLFG+GGG V+VPVL + F++ G+     M + +GTSL +I PT++ S+  H  
Sbjct: 22  IAGFFAGLFGIGGGAVLVPVLYECFRVAGVPLEARMPLCIGTSLAIIIPTAIRSYRSHLA 81

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL-LMGILMLKRDRLYCE 150
            G+++ ++L+ W   + +  +  SL+  +  +      F +        L+  +D     
Sbjct: 82  RGSVDREVLRRWAIPILVGVIGGSLIARYAPERVFKYVFVVVAWSAAARLLFGKDTWRFG 141

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPA 210
              P N +  I+G + G LS  +G+GGG+F+NLLM FYG  I+++ ATSAG++ LI+ P 
Sbjct: 142 NDLPKNPLMAIYGFIVGLLSTLMGIGGGVFSNLLMTFYGRPIHQSIATSAGLAVLISLPG 201

Query: 211 LLVRIYSGWGLNG-LP-------PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
            +  +Y+GW ++   P       P++LG+V++   L+++P S+L+ P   ++++ + K+ 
Sbjct: 202 AIGYVYAGWPVHERFPDVLALQMPFALGYVSVIGALLVIPASLLVAPFGVRVAHAMSKRA 261

Query: 263 LTIGFSMIMFTTSFVF 278
           L I F++ + T    F
Sbjct: 262 LEISFAIYLLTMGARF 277


>gi|126464647|ref|YP_001045760.1| hypothetical protein Rsph17029_3910 [Rhodobacter sphaeroides ATCC
           17029]
 gi|126106458|gb|ABN78988.1| protein of unknown function DUF81 [Rhodobacter sphaeroides ATCC
           17029]
          Length = 277

 Score =  152 bits (384), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 140/257 (54%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  LS   +   I  +  A  ++G L+GLFG+GGG + VPV  + F+L+G D  + M +A
Sbjct: 1   MELLSSGTIFALIAALAAAGAVTGFLAGLFGIGGGAISVPVFFEVFRLLGHDPEVAMPLA 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL VI PTS++S   H + GT++  +L+ W   + I   + S + S          F
Sbjct: 61  VGTSLAVIVPTSLVSAYGHLQRGTVDKDLLRVWTLPILIGVALGSALASVAPPRLFQGVF 120

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
               L++   +L   +       P   +  ++G V G +S  +G+GGG  +NL++  +G 
Sbjct: 121 VCVALVIATKLLTGGKWRLSEGLPRRAILRLYGAVVGLVSALMGIGGGAVSNLILTLHGV 180

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            I++A +T+AGV  LIA P  +  + +GWG   LPP +LGFV++   L+ +P SIL T  
Sbjct: 181 PIHRAVSTAAGVGVLIAVPGTIGYMIAGWGRPDLPPDALGFVSVATFLLTIPTSILTTRF 240

Query: 251 ATKLSYMIGKKYLTIGF 267
              L++ + K++L   F
Sbjct: 241 GVALAHRLSKEWLARSF 257


>gi|126731432|ref|ZP_01747238.1| hypothetical protein SSE37_12561 [Sagittula stellata E-37]
 gi|126707968|gb|EBA07028.1| hypothetical protein SSE37_12561 [Sagittula stellata E-37]
          Length = 276

 Score =  149 bits (375), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 134/246 (54%), Gaps = 1/246 (0%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G L+GLFGVGGG + VPV  + F  +G    I M VA+GTSL VI PTS++S   H   G
Sbjct: 25  GFLAGLFGVGGGAISVPVFYEIFGALGYPPDIAMPVAVGTSLAVIIPTSIVSARAHNAKG 84

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK- 152
           T++M ILK W   + I  ++ S +  +         F     +  + +L+R + +  R  
Sbjct: 85  TLDMAILKTWAVPVLIGVMLGSFIARYAAPEVFQAVFVTIASVNAVKLLRRGKSWQLRDT 144

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            P  +V  + G   G +S  +G+GGG  +NL +  +G  I++A +TSAGV  LIA P  +
Sbjct: 145 LPGPWVMRLGGGGIGLVSAIMGIGGGAVSNLFLTLHGVPIHRAVSTSAGVGVLIAIPGTV 204

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             I +G G +GLPP SLGFV++ A  + +P S+L T     +++ + ++ L + F   + 
Sbjct: 205 GYILAGMGKDGLPPASLGFVSLAAFALTIPTSLLTTRFGVAMAHRMERRALELAFGTFLA 264

Query: 273 TTSFVF 278
             +  F
Sbjct: 265 LVALRF 270


>gi|298290877|ref|YP_003692816.1| hypothetical protein Snov_0873 [Starkeya novella DSM 506]
 gi|296927388|gb|ADH88197.1| protein of unknown function DUF81 [Starkeya novella DSM 506]
          Length = 278

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 143/255 (56%), Gaps = 2/255 (0%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++VA F +G L+GLFG+GGG ++VPVL + F  +GID    MH+A+GT+L +I PT++ S
Sbjct: 17  LLVAGFATGILAGLFGIGGGAIIVPVLYEVFGAVGIDHDERMHLAVGTALAIIVPTALRS 76

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKR 144
           F+ HRR   ++  +LK W   + I  V  +++ +  +   L  AF  F  LM   L+  R
Sbjct: 77  FLAHRRRTKVDNGLLKQWAAPIIIGVVAGTVLAAISNDVVLKIAFVAFAALMSAKLLFGR 136

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
           D      + P      ++G   G  +  +G+ GG    +++  Y   I+ A ATSAG+ A
Sbjct: 137 DSWVVADQLPGRVPMALYGFGIGASAPLIGISGGGIATVVLTLYRVPIHTAIATSAGLGA 196

Query: 205 LIAFPALLVRIYSGW-GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           LIA P  +  I SG   ++ LPP SLG++++  ++++  ++ L+ PL  ++++   K+ L
Sbjct: 197 LIAVPGTIGYIISGLPHMDELPPLSLGYISLPGLVLVGGVATLVAPLGARMAHAFSKRQL 256

Query: 264 TIGFSMIMFTTSFVF 278
            +GF + +      F
Sbjct: 257 EVGFGIYLLLVGLRF 271


>gi|154251506|ref|YP_001412330.1| hypothetical protein Plav_1051 [Parvibaculum lavamentivorans DS-1]
 gi|154155456|gb|ABS62673.1| protein of unknown function DUF81 [Parvibaculum lavamentivorans
           DS-1]
          Length = 277

 Score =  136 bits (342), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 125/228 (54%), Gaps = 1/228 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL + F L+GID+++ MH+A+GTSLG I  TS+ S   H + G ++  +LK+W   + +
Sbjct: 42  PVLYQVFTLLGIDEAVRMHLAVGTSLGTIILTSIRSVRAHAKKGAVDWDMLKNWALPILV 101

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
                +L+ ++V    L   FA   L++   L   ++      + P    +Y    V G 
Sbjct: 102 GVGCGTLIAAYVSGDVLTAVFATIALVVAANLAFGKESWRLGTELPGKPAQYSVAGVIGV 161

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F    M  YG +  +A ATS+G+  LIA PA++  +++GW    LPP+S
Sbjct: 162 LSALMGIGGGTFAVSFMTLYGKNPREAVATSSGLGVLIAVPAVVGFVWAGWNDPLLPPFS 221

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           LG+VN+  + +I P+S+L  P    L++ I  K L   F+  +  TS 
Sbjct: 222 LGYVNLIGMALIAPLSVLAAPWGAALAHAISPKALIRAFAFFLALTSL 269


>gi|260430556|ref|ZP_05784529.1| membrane protein [Citreicella sp. SE45]
 gi|260418585|gb|EEX11842.1| membrane protein [Citreicella sp. SE45]
          Length = 276

 Score =  135 bits (341), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 149/270 (55%), Gaps = 6/270 (2%)

Query: 13  FLSKDCVVDYICL-IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
            L+    + ++CL +IVA  L G L+GLFGVGGG + VPV  + F  M     I M +A+
Sbjct: 4   LLADPGTLTFLCLGLIVAGALIGLLAGLFGVGGGAISVPVFYETFLFMDAPADIAMPLAV 63

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITT--VVTSLMISHVDKSFLNKA 129
           GTSL +I PTS++S   H   G ++M  L+ W   LP+T   ++ S +  +         
Sbjct: 64  GTSLAMIIPTSILSARTHAEKGALDMPHLRAW--ALPVTAGVLIGSAVARYAPAEVFQIV 121

Query: 130 FAIFCLLMGILMLKRDRLYCERK-FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           FA         ML   + +  R   P   ++ ++G + G LS  +G+GGG  +NL++  +
Sbjct: 122 FAAVAGFNAFKMLFVKKPWLIRDGLPGEPLRGLYGAIVGLLSALMGIGGGAISNLILTLH 181

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
           G ++++A ATSAGV  LIA P  +  + +GWG   LPP ++GFV++ A+++ LP ++L T
Sbjct: 182 GWTMHRAVATSAGVGLLIAIPGAIGYVIAGWGKPDLPPDAVGFVSLAALVLTLPTALLTT 241

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               +L++ + ++ LT  F + +   +  F
Sbjct: 242 RRGARLAHALSRETLTRLFGLFLAIVAIRF 271


>gi|114569506|ref|YP_756186.1| hypothetical protein Mmar10_0955 [Maricaulis maris MCS10]
 gi|114339968|gb|ABI65248.1| protein of unknown function DUF81 [Maricaulis maris MCS10]
          Length = 272

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 127/238 (53%), Gaps = 2/238 (0%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G ++GLFG+GGG+VMVP +  AFQ +G DD   M VA+GTSL VI  TS  S   H + 
Sbjct: 18  AGLIAGLFGIGGGIVMVPAMYFAFQFLGYDDPRIMQVAVGTSLAVIIATSARSVAAHAKR 77

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCER 151
             ++  +L+ W   + I T+V S +   +  +FL   F +  +++       R       
Sbjct: 78  DAVDFAVLRGWAPWIVIGTLVGSRIAHLLPGNFLTGLFGVTAMILSAQFFFGRPDWRLAD 137

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
             P   +++  G + G LS  +G+GGG+F   LM   G  I+KA AT+AG    I  P  
Sbjct: 138 DLPGGPLRWGLGGLIGILSALMGIGGGVFGVTLMTLCGKPIHKAVATAAGFGVAIGLPGA 197

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           +  + +GW  + + P+SLG+VN+    ++   +  + PL  KL++ + +K L   F++
Sbjct: 198 IGFVLNGWDQDAV-PYSLGYVNLPGFALLAGSAFFVAPLGAKLAHSLPEKTLKRCFAV 254


>gi|312114497|ref|YP_004012093.1| hypothetical protein Rvan_1747 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311219626|gb|ADP70994.1| protein of unknown function DUF81 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 281

 Score =  126 bits (317), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 119/225 (52%), Gaps = 7/225 (3%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK---DW 103
           V VPVL + F+L+G+D+SI M V + TSL +I PT++ S   H +HG + M++++    W
Sbjct: 41  VSVPVLYELFRLVGVDESIIMRVCVATSLAIIIPTAINSVRSHNKHGAVVMEVIRRLGPW 100

Query: 104 IFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG-ILMLKRDRLYCERKFPDNYVKYIW 162
           +       V+   + S    SFL   FA  C+ +   L   +     +   P      + 
Sbjct: 101 VVA---GAVLGVFIASRAPSSFLKAVFAASCIFIASRLAFGKSEPNPDAALPPAPWNLVA 157

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           G   G +S  +G+GGG +    M F G  I++A  T++G   +IA PA +  I  GW + 
Sbjct: 158 GFGIGLISTLIGIGGGAYVTAYMKFLGWPIHQAVGTASGFGPIIAIPATIGYIVEGWNVA 217

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
            LPP S G+V++   +++ P+S+L  PL  K+++ + ++ L I F
Sbjct: 218 ALPPLSAGYVSLLGFIVLGPVSVLAAPLGAKVAHRLSRRTLEITF 262


>gi|254504454|ref|ZP_05116605.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11]
 gi|222440525|gb|EEE47204.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11]
          Length = 275

 Score =  121 bits (304), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 118/223 (52%), Gaps = 1/223 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   F  + ID +I MHVA+GTSL  I  T   S   H   G++++ +LK W + + I
Sbjct: 40  PVLYYMFTALKIDPAILMHVAVGTSLATILATGTSSARAHYNRGSVDIDLLKRWWWAIAI 99

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
             +  +++  ++    L   F +  LL+   ++L+++      K P + +K + G + G 
Sbjct: 100 GVISGAMIAGNMSGGALTLVFGVVALLVSANMLLRKEGSALADKLPGSPIKELLGFLIGG 159

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+GGG      +  +   I KA  T+A +  +IA P  L+ I+ GWG  GLPP S
Sbjct: 160 ISVMMGIGGGTLGVPTLTLFNYPIRKAVGTAAAIGLIIAVPGTLMSIFFGWGAEGLPPLS 219

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           LG+VN+    +I+P S    PL  K+++ I    L + F++ +
Sbjct: 220 LGYVNLIGFFLIIPASTFAAPLGAKIAHAIDPSKLKLIFALFL 262


>gi|144899983|emb|CAM76847.1| conserved hypothetical protein, membrane [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 275

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 115/231 (49%), Gaps = 1/231 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   F ++G+D+++ MHVA+GTSL  I  TS  S+  H R G ++  +L+ W   + +
Sbjct: 40  PVLYHVFTVLGLDEAVRMHVAVGTSLATIIATSTSSWRSHARKGAVDRDLLRSWGPFILV 99

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
              + SL    V    L   FA F LL+ + M   R         P    K     + G 
Sbjct: 100 GVAIGSLAAGWVKGPVLTGIFAGFALLVSLHMAFGRPEWRLGHSLPTGAAKAGLAALIGG 159

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
            S  +G+GGG F    +  +G  I++A  T++ +  +I  P  L  I +GW    LPP+S
Sbjct: 160 CSAMMGIGGGTFAVPTLTLFGTPIHRAVGTASAIGLIIGIPGTLGFILTGWNAAQLPPFS 219

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           LG+VN+  V  ILP S+   P   +L++ +  + L   F++ +F TS   A
Sbjct: 220 LGYVNLLGVAAILPTSMAAAPWGARLAHSLDTRLLRRAFAVFLFLTSLRMA 270


>gi|114798514|ref|YP_760324.1| hypothetical protein HNE_1616 [Hyphomonas neptunium ATCC 15444]
 gi|114738688|gb|ABI76813.1| putative membrane protein [Hyphomonas neptunium ATCC 15444]
          Length = 281

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 132/261 (50%), Gaps = 4/261 (1%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           VV  I +++VA  ++G ++GLFG+GGG V+VP L   F+  G+      H+A+G+SL  I
Sbjct: 11  VVQLISVLLVAGLIAGFVAGLFGIGGGFVVVPALLLVFEFFGVAPQTTTHIAIGSSLATI 70

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS  S   H RHG ++ K+L+DW   L +      L+ S +D   +   F+    LMG
Sbjct: 71  IVTSARSLQAHTRHGAVDYKVLRDWTPWLMLGAFFGILLASFMDGQAMKWIFSGGVFLMG 130

Query: 139 ---ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
              I  + + +    R  P + ++       G  S  LG+GGG    L+M   G SI++A
Sbjct: 131 LHFIWPVLQPKEAVARDMPGSMIRGGIATFLGAFSALLGIGGGTIAVLVMTSCGRSIHQA 190

Query: 196 TATSAGVSALIAFP-ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            AT+AG   +IA P AL   I      + LP  S G++N+ AV  I  +S +  P   KL
Sbjct: 191 VATAAGFGIVIALPGALGFAILGIVSHDELPFGSFGYINLLAVGAISAMSFITAPAGAKL 250

Query: 255 SYMIGKKYLTIGFSMIMFTTS 275
           ++ +    L   F + +  TS
Sbjct: 251 AHKLNGPILKKVFGIYLVATS 271


>gi|300023379|ref|YP_003755990.1| hypothetical protein Hden_1866 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299525200|gb|ADJ23669.1| protein of unknown function DUF81 [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 274

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 124/232 (53%), Gaps = 14/232 (6%)

Query: 54  KAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK---DWIFVLPIT 110
           + +  +G+ + + MHV +GT+L VIAPT + SF   R  GT+++ I++    WIFV    
Sbjct: 45  EVYGAIGVPEDVRMHVTLGTTLAVIAPTVLRSFAAFRARGTVDIDIVRRMGPWIFV---- 100

Query: 111 TVVTSLMIS-HVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMV--T 166
            V   ++I+ H     L   + +F   + I M L RD        P     ++ G     
Sbjct: 101 GVTAGILIADHASSVALRWVWVVFGTALAIKMALGRDDWRIANTLPRP--PWLEGAAFGI 158

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  +G+GG  FT  L+  +G  I +A AT+ G+  +IA P L+  + SGWG+ GLPP
Sbjct: 159 GTISTLMGIGGASFTVPLLTLFGRPILQAVATATGLGPIIAIPGLIGYVISGWGVAGLPP 218

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            SLG+VN GA L+I P+ +L  P   ++++ I K+ L + F+  +   +  F
Sbjct: 219 LSLGYVNAGA-LLIAPLGVLAAPYGVRMAHSIPKRALELAFATFLACVALRF 269


>gi|114800124|ref|YP_761412.1| hypothetical protein HNE_2732 [Hyphomonas neptunium ATCC 15444]
 gi|114740298|gb|ABI78423.1| putative membrane protein [Hyphomonas neptunium ATCC 15444]
          Length = 264

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 122/237 (51%), Gaps = 2/237 (0%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +A   +G  +GLFG+GGG+V+VPVL      +G  ++  MHVA+ TSL  I  TSV S M
Sbjct: 7   IAGLFAGLAAGLFGIGGGVVIVPVLFFLLDSLGYTET-AMHVAVSTSLATIILTSVRSVM 65

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA-IFCLLMGILMLKRDR 146
            H + G ++ +I++ W   + + +V+  L+  +  K  +   F  +  L        R  
Sbjct: 66  AHNKRGAVDWRIIRTWSPWIVLGSVIGILLAGYFSKQVMLGIFGTVLILFAAQFYFGRPG 125

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
                + P   ++   G   G LS  +G+GGG     LM   G  +++A AT+AG    I
Sbjct: 126 WKLAPEMPVGILRAAIGAFNGALSSIMGIGGGTLGVTLMTLCGMPMHRAVATAAGWGVAI 185

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            FP  +  +  GWG +GLPP+S GFVN+ A  +I   ++L+ P+   L++ +    L
Sbjct: 186 GFPGAIAAMIVGWGRDGLPPFSAGFVNLPAFALISVFTVLMAPVGAALAHKLDADRL 242


>gi|253998207|ref|YP_003050270.1| hypothetical protein Msip34_0495 [Methylovorus sp. SIP3-4]
 gi|253984886|gb|ACT49743.1| protein of unknown function DUF81 [Methylovorus sp. SIP3-4]
          Length = 263

 Score =  119 bits (298), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 125/232 (53%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + A   +G LSGLFG+GGG+V+V +L+  F  +G  +S  MH+A+GTSL  I  TS+ S 
Sbjct: 7   LAAGAATGVLSGLFGIGGGVVIVSILAYLFAGLGFPESHIMHIALGTSLASIVFTSLSSA 66

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             H R   ++  +++     + + T++ SL+++ +    L   FA+F   +   ML +  
Sbjct: 67  RAHHRKDNVDFPLVRQLAPTIVLGTLLGSLIVAQIHSHALQAIFAVFLTAVACQMLFKLS 126

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
                + P  ++  + G+V GF+S  +G+GGG  +   + ++   + +A  TSA +   I
Sbjct: 127 PNQASRVPGRWLNGVMGVVIGFISSLVGIGGGTVSVPYLHYFNVPLKRAIGTSAAIGLPI 186

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           A    +  IY+GW + GLP  SLGF+ + A+  I   SI+  P    L++ +
Sbjct: 187 ALAGTIGYIYTGWSVPGLPANSLGFIYLPALAGIALASIITAPWGAALAHRL 238


>gi|86135928|ref|ZP_01054507.1| hypothetical protein MED193_17434 [Roseobacter sp. MED193]
 gi|85826802|gb|EAQ46998.1| hypothetical protein MED193_17434 [Roseobacter sp. MED193]
          Length = 274

 Score =  119 bits (297), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 125/233 (53%), Gaps = 6/233 (2%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L  A  L G+D ++ M VA+GTSL  I  TS+ S   H R G I+M +LK W   + I
Sbjct: 38  PALYLALTLTGMDSALTMQVAVGTSLATIVFTSLSSSYGHYRKGAIDMGLLKLWSPSILI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW---GMVT 166
             V+ S++   V    L   FA    ++ + M+ R         P ++ K +W   G+V 
Sbjct: 98  GVVIGSVLGGLVSGKVLIAVFATVAAIVALDMILRKG--GGDSAPRSFAKPVWAALGVVA 155

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  +G+GGG     L+ F G  I KA  TSA +  +I  P  L+ + +G+G +GLPP
Sbjct: 156 GAISAMMGIGGGTVCVPLLNFLGYDIRKAVGTSAAIGFVIGLPGALIYMGTGFGADGLPP 215

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM-IMFTTSFVF 278
           +S G+VN+    +I+P+S     +  KL++ I ++ L + F + +MFT+  +F
Sbjct: 216 FSFGYVNLFLAAVIIPLSTSFARVGVKLAHSIPRRALRLAFGLFLMFTSLHMF 268


>gi|313200277|ref|YP_004038935.1| hypothetical protein MPQ_0517 [Methylovorus sp. MP688]
 gi|312439593|gb|ADQ83699.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 263

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 124/232 (53%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + A   +G LSGLFG+GGG+V+V +L+  F  +G  +S  MH+A+GTSL  I  TS+ S 
Sbjct: 7   LAAGAATGVLSGLFGIGGGVVIVSILAYLFAGLGFPESHIMHIALGTSLASIVFTSLSSA 66

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             H R   ++  +++     + + T++ SL+++ +    L   FA+F   +   ML +  
Sbjct: 67  RAHHRKDNVDFALVRQLAPTIVLGTLLGSLIVAQIHSHALQAIFAVFLTAVACQMLFKLS 126

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
                + P  ++  + G+V GF+S  +G+GGG  +   + +    + +A  TSA +   I
Sbjct: 127 PNQASRVPGRWLNGVMGVVIGFISSLVGIGGGTVSVPYLHYCNVPLKRAIGTSAAIGLPI 186

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           A    +  IY+GW + GLP  SLGF+ + A+  I   SI+  P    L++ +
Sbjct: 187 ALAGTIGYIYTGWSVPGLPANSLGFIYLPALAGIALASIITAPWGAALAHRL 238


>gi|110633864|ref|YP_674072.1| hypothetical protein Meso_1511 [Mesorhizobium sp. BNC1]
 gi|110284848|gb|ABG62907.1| protein of unknown function DUF81 [Chelativorans sp. BNC1]
          Length = 278

 Score =  116 bits (290), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 145/266 (54%), Gaps = 4/266 (1%)

Query: 14  LSKDCVVDYI---CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           +  D + DY      +I A  L G ++GL GVGGG+V+VPVL      + +D+SI M +A
Sbjct: 1   MPSDMMTDYALFAAAMIFAGVLGGFIAGLLGVGGGIVIVPVLYFVLGGLSVDESIRMKIA 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           + TSL  I  TS+ S   H R G+I+  +LK W   + I  V  + + ++V    L   F
Sbjct: 61  VATSLSTILFTSLSSAGAHYRKGSIDFALLKSWAVPVFIGVVAGTALAAYVSGIVLTAVF 120

Query: 131 AIFCLLMGILMLKRDRLYC-ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
           AI  LL+ + M  R +       FP+ +VK   G V G +S  +G+GGG  +  +   +G
Sbjct: 121 AIVALLVAVNMTLRAKSEALADDFPNRFVKAFCGFVVGAISAMMGIGGGTLSVPIQTAFG 180

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             I KA  T+A +  +IA P  +  + +GW  +GLP  SLGFVN+ A+  ++P+++ + P
Sbjct: 181 CDIRKAVGTAAAIGFIIAIPGAIGYMIAGWNADGLPAGSLGFVNLVALGALIPLTMGVAP 240

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTS 275
           L  K ++ I K  L+  F++ +  TS
Sbjct: 241 LGAKAAHAIPKAVLSYSFAVFLALTS 266


>gi|118593614|ref|ZP_01550991.1| hypothetical protein SIAM614_05471 [Stappia aggregata IAM 12614]
 gi|118433832|gb|EAV40492.1| hypothetical protein SIAM614_05471 [Stappia aggregata IAM 12614]
          Length = 275

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 112/223 (50%), Gaps = 1/223 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   F  + ID S+ MHVA+GTSL  I  T   S   H   G+++M +LK W + + +
Sbjct: 40  PVLYYMFTALKIDPSVLMHVAVGTSLATILATGTSSARAHYNRGSVDMDLLKRWWWAIAL 99

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
             +    +  ++    L   F I  L +   +M ++D  +   K P + +K   G + G 
Sbjct: 100 GVIAGGTLAGNISGGALTLVFGIVALAVSANMMFRKDGSHLADKLPGSPIKEALGFLIGG 159

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+GGG      +  +   I KA  T+A +  +IA P  L+ I+ G G  G PP+S
Sbjct: 160 ISVMMGIGGGTLGVPTLTLFNYPIRKAVGTAAAIGLIIAVPGTLLSIFFGRGEEGRPPFS 219

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           LG+VN+    +I+P S    P   K+++ I    L + F++ +
Sbjct: 220 LGYVNLIGFFLIIPASTFAAPWGAKIAHAIDPSKLKLVFALFL 262


>gi|307941782|ref|ZP_07657137.1| membrane protein [Roseibium sp. TrichSKD4]
 gi|307775390|gb|EFO34596.1| membrane protein [Roseibium sp. TrichSKD4]
          Length = 275

 Score =  115 bits (288), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 117/223 (52%), Gaps = 1/223 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   F  +G+D S+ MHVA+GTSL  I  T   S   H + G+++M +LK W + + +
Sbjct: 40  PVLYYMFNALGVDQSVLMHVAVGTSLATILATGTSSARAHWKRGSVDMDLLKSWWWAIAL 99

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-KRDRLYCERKFPDNYVKYIWGMVTGF 168
             V  + +  ++    L   F +  +++   ML +++      K P   ++   G++ G 
Sbjct: 100 GVVGGATLAGNISGGALTAVFGVVAVVVAANMLMRKEGAALAEKLPGPPLREALGVMIGG 159

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+GGG      +  +   I KA  T+A +  +IA P  L+ IY GWG    PP+S
Sbjct: 160 ISVMMGIGGGTLGVPTLTLFNFPIRKAVGTAAAIGLIIAVPGTLMSIYFGWGAENRPPFS 219

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +G+VN+   L+I+P S    PL  K+++ I    L + F++ +
Sbjct: 220 VGYVNLIGFLLIIPASTYTAPLGAKIAHAIDPSKLKLVFALFL 262


>gi|301166197|emb|CBW25772.1| hypothetical integral membrane protein [Bacteriovorax marinus SJ]
          Length = 262

 Score =  115 bits (287), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 133/243 (54%), Gaps = 8/243 (3%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +GTLSGLFG+GGGLV+VP L   F+ +G    I +H+A+GTSL +I  T+  S   H++ 
Sbjct: 13  AGTLSGLFGIGGGLVIVPTLLFCFKYLGFSPEIAIHMAIGTSLSIIVVTATNSVYGHQKR 72

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM---LKRDRLYC 149
             I+ ++ K   F L I T    ++ S +  SFL   F+++ +L+ I M   +K D++  
Sbjct: 73  KGIDWQVFKKIFFPLVIGTYFGGMISSKLSASFLEIVFSVYVVLVSIKMFLDVKVDKVQK 132

Query: 150 ERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
           E     + + Y + G + GF S  LG+GGG  +   + + G S+ KA   SA +   I+ 
Sbjct: 133 E----TSLILYSFVGALIGFKSAILGIGGGTISIPFLSWRGFSMKKAVGVSAALGLPISI 188

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
              +  I SG  + GLP  SLG++ + A + ++  S     +  KLS+ + ++ +  GF+
Sbjct: 189 VGSISYIVSGLKVQGLPEHSLGYIYLPAFIGVIITSSFFAHIGAKLSHRLPQQKMKKGFA 248

Query: 269 MIM 271
           + +
Sbjct: 249 IFL 251


>gi|329119353|ref|ZP_08248039.1| membrane lipoprotein [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464498|gb|EGF10797.1| membrane lipoprotein [Neisseria bacilliformis ATCC BAA-1200]
          Length = 270

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 130/252 (51%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           + + +++ A  L+G ++G+FGVGGG ++VP++    Q+ G++  +   H A+GTS  V+ 
Sbjct: 5   ETVAVMLAAGSLAGVVAGMFGVGGGTILVPLVLWVLQIQGVEGFAYAQHTAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  S +   R G ++ +ILK  I  + +     +L+  H+    L   FA+F  ++ +
Sbjct: 65  FTSFSSALSQHRKGAVDWRILKSMIPGVLLGVAAGALVSRHLPNKGLQVFFALFAAVIAV 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   +    R+ P     +  G + G LS  +G+GGG  T   + F    +++A  TS
Sbjct: 125 RSLAGIKPVPSRQLPGRGGLFSAGSLFGLLSSWIGIGGGSLTVPFLTFCNVPVHRAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A +   IA    L   Y+G G  GLP  S GFV + AV ++   ++L  PL  +LS+ + 
Sbjct: 185 AALGWPIALAGALGYWYAGIGAAGLPAGSAGFVYLPAVAVLAVATLLSAPLGVRLSHRLP 244

Query: 260 KKYLTIGFSMIM 271
              L  GF +++
Sbjct: 245 AARLKQGFGILL 256


>gi|161831015|ref|YP_001595920.1| hypothetical protein COXBURSA331_A0020 [Coxiella burnetii RSA 331]
 gi|161762882|gb|ABX78524.1| putative membrane protein [Coxiella burnetii RSA 331]
          Length = 275

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 128/253 (50%), Gaps = 6/253 (2%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L  LFGVGGG+V+VPV    F    +     MH A+GTSL ++ P +++S   H +
Sbjct: 20  IAGYLGSLFGVGGGIVLVPVFLTIFPFFHVSHEAVMHNAVGTSLALLVPNALLSARNHYK 79

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCE 150
            G  +  +LK WI  + I  +   L+I  +  ++L   FA++     + ++LK+ +    
Sbjct: 80  RGNFDFPLLKQWIPFILIGAITGILIIKFIPTAYLKILFALYLYASFLYVILKKGKGNEI 139

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPA 210
            + P  +   I G++ G  S  LG+GGG F+      Y  SI K+ A ++  +  I    
Sbjct: 140 EEQPRGWGMRIAGVLIGGFSVLLGMGGGTFSIPFCQAYNYSIKKSIALASATAIFIGLIG 199

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            +  I SGW   G  P+SL FVN+ A + ILP  I+ +P   K +  +  + L I ++  
Sbjct: 200 TIGVIISGWNAPGRAPYSLRFVNLLAFICILPTIIIFSPFGVKTAQRLSLRQLRILYAFF 259

Query: 271 MFT-----TSFVF 278
           + T     TS VF
Sbjct: 260 LLTMGLYMTSHVF 272


>gi|332141005|ref|YP_004426743.1| hypothetical protein MADE_1008025 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551027|gb|AEA97745.1| hypothetical protein MADE_1008025 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 272

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 122/244 (50%), Gaps = 4/244 (1%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G L+G+ GVGGG+V+VPVL   FQ +G+     M +A  TSL  I PTSV S   H   
Sbjct: 21  AGLLAGMLGVGGGIVIVPVLFFLFQALGVSPESAMVIATATSLATIVPTSVSSIRAHHAK 80

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCE 150
           G ++  +LK W   + I  +  S +++ V+ +FL   F I   L  I ML  K+D L+  
Sbjct: 81  GNVDFALLKAWAVFILIGVLAGSYLVTVVNPTFLTLLFGIIATLSAINMLIGKKDALF-- 138

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPA 210
              P    + +     G  S  +G+GGG  T   + F     +KA  T+A V  +I+ PA
Sbjct: 139 NGLPGRVGQSVMASCIGLFSSMVGIGGGTLTVPTLTFCNYPAHKAVGTAAAVGLIISLPA 198

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            L  ++ G      P  + G+VN+     I+P+++L  P+   ++  +    L   F+++
Sbjct: 199 ALTLLFVGATPADAPFATYGYVNLLGFACIVPLTVLFAPIGAGIANKLDAGLLKKIFAVV 258

Query: 271 MFTT 274
           +  T
Sbjct: 259 LIIT 262


>gi|212213509|ref|YP_002304445.1| hypothetical membrane spanning protein [Coxiella burnetii
           CbuG_Q212]
 gi|212011919|gb|ACJ19300.1| hypothetical membrane spanning protein [Coxiella burnetii
           CbuG_Q212]
          Length = 273

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 126/252 (50%), Gaps = 6/252 (2%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L  LFGVGG +V+VPV    F    +     MH A+GTSL ++ P +++S   H +
Sbjct: 20  IAGYLGSLFGVGGSIVLVPVFLTIFPFFHVSHEAVMHNAVGTSLALLVPNALLSARNHYK 79

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
            G  +  +LK WI  + I  +   L+I  +  ++L   FA++     + ++ +     E 
Sbjct: 80  RGNFDFPLLKQWIPFILIGAITGILIIKFIPTAYLKILFALYLYASFLYVILKKGNEIEG 139

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
           + P  +   I G++ G  S  LG+GGG F+      Y  SI K+ A ++  +  I     
Sbjct: 140 Q-PRGWGMRIAGVLIGGFSVLLGMGGGTFSIPFCQAYNYSIKKSIALASATAIFIGLIGT 198

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +  I SGW   G  P+SLGFVN+ A + ILP  I+ +P   K +  +  + L I ++  +
Sbjct: 199 IGVIISGWNAPGRAPYSLGFVNLLAFICILPTIIIFSPFGVKTAQRLSLRQLRILYAFFL 258

Query: 272 FT-----TSFVF 278
            T     TS VF
Sbjct: 259 LTMGLYMTSHVF 270


>gi|15595537|ref|NP_249031.1| hypothetical protein PA0340 [Pseudomonas aeruginosa PAO1]
 gi|107099324|ref|ZP_01363242.1| hypothetical protein PaerPA_01000336 [Pseudomonas aeruginosa PACS2]
 gi|218889081|ref|YP_002437945.1| putative permease [Pseudomonas aeruginosa LESB58]
 gi|254237424|ref|ZP_04930747.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254243439|ref|ZP_04936761.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296386836|ref|ZP_06876335.1| putative permease [Pseudomonas aeruginosa PAb1]
 gi|9946189|gb|AAG03729.1|AE004472_1 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|126169355|gb|EAZ54866.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126196817|gb|EAZ60880.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218769304|emb|CAW25064.1| putative permease [Pseudomonas aeruginosa LESB58]
          Length = 267

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 124/254 (48%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L IV    +G L+GLFGVGGGL++VP L  +F   G    +   +A+GTSL  I  TS+ 
Sbjct: 5   LYIVLGACAGVLAGLFGVGGGLIIVPALVFSFTAHGFGGDVLTQMAVGTSLATIVFTSIN 64

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S +EH R G +   +       + I + + +L  + +    L K   +F +L+ + M+  
Sbjct: 65  SILEHHRRGAVRWPVFAWMTLGILIGSALGALTAAQIKGPLLQKIIGVFAILVALQMVLD 124

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            +    R+ P      + G V G+ S   G+GGG  T   + +    + +A ATS+    
Sbjct: 125 LKPKGSREVPGKGGLTLAGAVIGWASAIFGIGGGSLTVPFLSWRSVPMQQAVATSSACGL 184

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
            IA    L  I  GW    LP WSLG+V + A++ I   S+L      +L++ +  + L 
Sbjct: 185 PIAISGALSFIAVGWHNPQLPEWSLGYVYLPALVGIAATSMLFARFGARLAHRLSPRVLK 244

Query: 265 IGFSMIMFTTSFVF 278
             F++++F+    F
Sbjct: 245 RLFALLLFSVGISF 258


>gi|49082896|gb|AAT50848.1| PA0340 [synthetic construct]
          Length = 268

 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 124/254 (48%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L IV    +G L+GLFGVGGGL++VP L  +F   G    +   +A+GTSL  I  TS+ 
Sbjct: 5   LYIVLGACAGVLAGLFGVGGGLIIVPALVFSFTAHGFGGDVLTQMAVGTSLATIVFTSIN 64

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S +EH R G +   +       + I + + +L  + +    L K   +F +L+ + M+  
Sbjct: 65  SILEHHRRGAVRWPVFAWMTLGILIGSALGALTAAQIKGPLLQKIIGVFAILVALQMVLD 124

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            +    R+ P      + G V G+ S   G+GGG  T   + +    + +A ATS+    
Sbjct: 125 LKPKGSREVPGKGGLTLAGAVIGWASAIFGIGGGSLTVPFLSWRSVPMQQAVATSSACGL 184

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
            IA    L  I  GW    LP WSLG+V + A++ I   S+L      +L++ +  + L 
Sbjct: 185 PIAISGALSFIAVGWHNPQLPEWSLGYVYLPALVGIAATSMLFARFGARLAHRLSPRVLK 244

Query: 265 IGFSMIMFTTSFVF 278
             F++++F+    F
Sbjct: 245 RLFALLLFSVGISF 258


>gi|149928010|ref|ZP_01916259.1| hypothetical protein LMED105_14710 [Limnobacter sp. MED105]
 gi|149823306|gb|EDM82540.1| hypothetical protein LMED105_14710 [Limnobacter sp. MED105]
          Length = 278

 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 117/227 (51%), Gaps = 1/227 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   F L+G+D+S+ MHVA+GTSL  I PTS +S   H+  G ++  + K  +  L I
Sbjct: 43  PVLYHLFTLLGVDESVKMHVAVGTSLATIIPTSFISAKSHKAKGNLDEPLFKSLVLPLFI 102

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY-CERKFPDNYVKYIWGMVTGF 168
             V+ S    +V    L+  FA   LL+   M  R +        P +  K I G   G 
Sbjct: 103 GVVIGSFASGYVSGDVLSIVFASIALLVAANMAFRSKAKPVAESLPRSPFKQIMGTFIGG 162

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
            S  +G+GGG  +  ++  +   +++A  T+A +  +I+ P  +  + +GW +   PP +
Sbjct: 163 FSTLMGIGGGTLSVPILNAFNVPMHRAVGTAAAIGMVISIPGAIGFLLNGWNVENTPPLT 222

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +G++N+    +I+P+++ + P+  +++       L + F+  +F T+
Sbjct: 223 IGYINLIGFALIVPMTMWMAPVGARMASATTAARLKLAFAFFLFITA 269


>gi|158423254|ref|YP_001524546.1| putative permease [Azorhizobium caulinodans ORS 571]
 gi|158330143|dbj|BAF87628.1| putative permease [Azorhizobium caulinodans ORS 571]
          Length = 283

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 2/229 (0%)

Query: 52  LSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITT 111
           L + F+++G+ D + M + +GTSL +I PTS+ SF  H+  G +   +LK       I  
Sbjct: 48  LYEVFRIIGVSDDVRMQLCIGTSLAIIVPTSIRSFHAHKARGLVVPGLLKVLGPPAVIGV 107

Query: 112 VVTSLMISHVDKSFLNKAF-AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
            + S +   V+   L   F A+  +L    +  R       + P      IWG   G  S
Sbjct: 108 ALGSAIAGMVNGKILQGVFIALSVVLAARSISGRTDWRLGDQLPGKATLRIWGFFIGMAS 167

Query: 171 GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG-LNGLPPWSL 229
             +G+ GG  + +L+  YG  I+ A ATSAGV   I  P +L    SGW  L+ LPP SL
Sbjct: 168 SMVGIAGGGLSTILLTLYGVPIHAAVATSAGVGIFIPLPGVLGYAISGWPHLSDLPPLSL 227

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V++    ++ P+S L  P+  +L++ + ++ L +GF + +   +  F
Sbjct: 228 GYVSVIGFALMAPVSTLTAPIGARLAHRLPRRGLEVGFGVFLLAVAARF 276


>gi|313112044|ref|ZP_07797828.1| putative permease [Pseudomonas aeruginosa 39016]
 gi|310884330|gb|EFQ42924.1| putative permease [Pseudomonas aeruginosa 39016]
          Length = 267

 Score =  112 bits (281), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 124/254 (48%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L IV    +G L+GLFGVGGGL++VP L  +F   G    +   +A+GTSL  I  TS+ 
Sbjct: 5   LYIVLGACAGVLAGLFGVGGGLIIVPALVFSFTAHGFGGDVLTQMAVGTSLATIVFTSIN 64

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S +EH R G +   +       + + + + +L  + +    L K   +F +L+ + M+  
Sbjct: 65  SILEHHRRGAVRWPVFAWMTLGILVGSALGALTAAQIKGPLLQKIIGVFAILVALQMVLD 124

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            +    R+ P      + G V G+ S   G+GGG  T   + +    + +A ATS+    
Sbjct: 125 LKPKGNREVPGKGGLTLAGAVIGWASAIFGIGGGSLTVPFLSWRSVPMQQAVATSSACGL 184

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
            IA    L  I  GW    LP WSLG+V + A++ I   S+L      +L++ +  + L 
Sbjct: 185 PIAISGALSFIAVGWHNPQLPEWSLGYVYLPALVGIAATSMLFARFGARLAHRLSPRVLK 244

Query: 265 IGFSMIMFTTSFVF 278
             F++++F+    F
Sbjct: 245 RLFALLLFSVGISF 258


>gi|152985930|ref|YP_001345828.1| hypothetical protein PSPA7_0433 [Pseudomonas aeruginosa PA7]
 gi|150961088|gb|ABR83113.1| domain of unknown function [Pseudomonas aeruginosa PA7]
          Length = 260

 Score =  112 bits (281), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 123/254 (48%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L IV    +G L+GLFGVGGGL++VP L  +F   G    +   +A+GTSL  I  TS+ 
Sbjct: 5   LYIVLGACAGVLAGLFGVGGGLIIVPALVFSFTAHGFGGDVLTQMAVGTSLATIVFTSIN 64

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S +EH R G +   +       + I + + +L  + +    L K   +F +L+ + M   
Sbjct: 65  SILEHHRRGAVRWPVFAWMTLGILIGSALGALTAAQIKGPLLQKIIGVFAILVALQMTLD 124

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            +     + P      + G V G+ S   G+GGG  T   + + G  + +A ATS+    
Sbjct: 125 LKPRGRHEVPGKGGLTVAGAVIGWASAIFGIGGGSLTVPFLSWRGVPMQQAVATSSACGL 184

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
            IA    L  I  GW    LP WSLG+V + A++ I   S+L      +L++ +  + L 
Sbjct: 185 PIAISGALSFIAVGWHNPQLPEWSLGYVYLPALVGIAATSMLFARFGARLAHRLSPRGLK 244

Query: 265 IGFSMIMFTTSFVF 278
             F++++F+    F
Sbjct: 245 RLFALLLFSVGVSF 258


>gi|330505461|ref|YP_004382330.1| hypothetical protein MDS_4547 [Pseudomonas mendocina NK-01]
 gi|328919747|gb|AEB60578.1| hypothetical protein MDS_4547 [Pseudomonas mendocina NK-01]
          Length = 260

 Score =  112 bits (280), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 115/229 (50%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G L+GLFGVGGGL++VPVL  +F   G+   I  H+A+GTSL  I  TS+ S +EH R 
Sbjct: 13  AGVLAGLFGVGGGLIIVPVLVLSFTSQGMATEILTHLAVGTSLATIVFTSINSLIEHHRK 72

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           G +   + +     + +   + +L  + +    L K    F +++   M    +    R 
Sbjct: 73  GAVRWPLFRWLSLGILLGAALGALTAALIQGPMLQKIIGTFAIIVAAQMALDLKPKASRG 132

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            P      + G V G+ S   G+GGG  T   +++    I +A ATSA     IA    L
Sbjct: 133 VPGKPTLTVAGGVIGWASAIFGIGGGSLTVPFLVWRSVPIQQAVATSAACGLPIAIAGAL 192

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             +++GWG   LPPWS+GFV + A+L I   S+       +L++ +  +
Sbjct: 193 SFMFTGWGNAHLPPWSVGFVYLPALLGIAVTSMFFARFGARLAHRLSPQ 241


>gi|116054068|ref|YP_788511.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115589289|gb|ABJ15304.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 267

 Score =  112 bits (279), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 124/254 (48%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L IV    +G L+GLFGVGGGL++VP L  +F   G    +   +A+GTSL  I  TS+ 
Sbjct: 5   LYIVLGACAGVLAGLFGVGGGLIIVPALVFSFTAHGFGGDVLTQMAVGTSLATIVFTSIN 64

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S +EH R G +   +       + I + + +L  + +    L K   +F +L+ + M+  
Sbjct: 65  SILEHHRRGAVRWPVFAWMTLGILIGSALGALTAAQIKGLLLQKIIGVFAILVALQMVLD 124

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            +    R+ P      + G V G+ S   G+GGG  T   + +    + +A ATS+    
Sbjct: 125 LKPKGSREVPGKGGLTLAGAVIGWASAIFGIGGGSLTVPFLSWRSVPMQQAVATSSACGL 184

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
            IA    L  I  GW    LP WSLG+V + A++ I   S+L      +L++ +  + L 
Sbjct: 185 PIAISGALSFIAVGWHNPQLPEWSLGYVYLPALVGIAATSMLFARFGARLAHRLSPRVLK 244

Query: 265 IGFSMIMFTTSFVF 278
             F++++F+    F
Sbjct: 245 RLFALLLFSVGISF 258


>gi|319781760|ref|YP_004141236.1| hypothetical protein Mesci_2033 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167648|gb|ADV11186.1| protein of unknown function DUF81 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 278

 Score =  112 bits (279), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 116/227 (51%), Gaps = 1/227 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL     L     ++  H+A+ TSL VI PTS+ S   H R G ++  +L  W   + +
Sbjct: 46  PVLFWVLSLFHFSPAVISHLAVATSLAVIIPTSISSMRSHNRRGNVDRPLLTLWGPAVFV 105

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN-YVKYIWGMVTGF 168
           + ++  +    +  + L   F +  LL+ + M     L      P + ++      V GF
Sbjct: 106 SALIGGITSKFIPGAGLRLVFGVVGLLVALNMALPKHLVISDHLPQSGWINRAIASVIGF 165

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+GGG  +   +  +   +++A  TS+ +  LIA PA+   I+SG  + G PP S
Sbjct: 166 VSSLMGIGGGTLSVPTLSSFSFPVHRAVGTSSALGLLIALPAVAGFIWSGLAIAGRPPLS 225

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           LG+V++ AV II P+S L  PL  +L++ +  +YL + F+  +  T+
Sbjct: 226 LGYVSLPAVAIIAPVSFLFAPLGARLAHALNPRYLKLAFAFFLAITA 272


>gi|153206951|ref|ZP_01945769.1| putative membrane protein [Coxiella burnetii 'MSU Goat Q177']
 gi|212219558|ref|YP_002306345.1| hypothetical membrane spanning protein [Coxiella burnetii
           CbuK_Q154]
 gi|120577024|gb|EAX33648.1| putative membrane protein [Coxiella burnetii 'MSU Goat Q177']
 gi|212013820|gb|ACJ21200.1| hypothetical membrane spanning protein [Coxiella burnetii
           CbuK_Q154]
          Length = 277

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 128/255 (50%), Gaps = 8/255 (3%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L  LFGVGGG+++VPV    F    +     MH A+GTSL ++ P +++S   H +
Sbjct: 20  IAGYLGSLFGVGGGIILVPVFLTIFPFFHVSHEAVMHNAVGTSLALLVPNALLSARNHYK 79

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCE 150
            G  +  +LK WI  + I  +   L+I  +  ++L   FA++     + ++LK+ +    
Sbjct: 80  RGNFDFPLLKQWIPFILIGAITGILIIKFIPTAYLKILFALYLYASFLYVILKKGKGNEI 139

Query: 151 RKFPDNYVKYIWG--MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
              P  +   I G  ++ G  S  LG+GGG F+      Y  SI K+ A ++  +  I  
Sbjct: 140 EGQPRGWGMRIAGVCVLIGGFSVLLGIGGGTFSIPFCQAYNYSIKKSIALASATAIFIGL 199

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
              +  I SGW   G  P+SLGFVN+ A + ILP  I+ +P   K +  +  + L I ++
Sbjct: 200 IGTIGVIISGWNAPGRAPYSLGFVNLLAFICILPTIIIFSPFGVKTAQRLSLRQLRILYA 259

Query: 269 MIMFT-----TSFVF 278
             + T     TS VF
Sbjct: 260 FFLLTMGLYMTSHVF 274


>gi|165918287|ref|ZP_02218373.1| putative membrane protein [Coxiella burnetii RSA 334]
 gi|165918147|gb|EDR36751.1| putative membrane protein [Coxiella burnetii RSA 334]
          Length = 277

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 128/255 (50%), Gaps = 8/255 (3%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L  LFGVGGG+V+VPV    F    +     MH A+GTSL ++ P +++S   H +
Sbjct: 20  IAGYLGSLFGVGGGIVLVPVFLTIFPFFHVSHEAVMHNAVGTSLALLVPNALLSARNHYK 79

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCE 150
            G  +  +LK WI  + I  +   L+I  +  ++L   FA++     + ++LK+ +    
Sbjct: 80  RGNFDFPLLKQWIPFILIGAITGILIIKFIPTAYLKILFALYLYASFLYVILKKGKGNEI 139

Query: 151 RKFPDNYVKYIWG--MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
              P  +   I G  ++ G  S  LG+GGG F+      Y  SI K+ A ++  +  I  
Sbjct: 140 EGQPRGWGMRIAGVCVLIGGFSVLLGMGGGTFSIPFCQAYNYSIKKSIALASATAIFIGL 199

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
              +  I SGW   G  P+SLGFVN+ A + ILP  I+ +P   K +  +  + L I ++
Sbjct: 200 IGTIGVIISGWNAPGRAPYSLGFVNLLAFICILPTIIIFSPFGVKTAQRLSLRQLRILYA 259

Query: 269 MIMFT-----TSFVF 278
             + T     TS VF
Sbjct: 260 FFLLTMGLYMTSHVF 274


>gi|262277020|ref|ZP_06054813.1| membrane protein [alpha proteobacterium HIMB114]
 gi|262224123|gb|EEY74582.1| membrane protein [alpha proteobacterium HIMB114]
          Length = 277

 Score =  110 bits (276), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 141/256 (55%), Gaps = 2/256 (0%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M+ L  + ++  I ++ +A+  SG ++GL GVGGG++MVP L  AF  +  D++I MH++
Sbjct: 1   MITLEINQLITLITVLAIAATASGFIAGLLGVGGGILMVPALYYAFSTLNFDENIIMHLS 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL +I PTS+MS   H +   +N  ++K +   + I   + + M +H+    L   F
Sbjct: 61  LGTSLAIIIPTSIMSAKTHYKFNAVNFDLIKSFGLPVVIGIFIGTFMATHLRTVQLLLMF 120

Query: 131 AIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
           +IF   +G+  +  R+++  + K    ++K I G   GF+S  LG+GGG      M  +G
Sbjct: 121 SIFSFCVGLFFIFIREKMGEKPKSVGTFIKSITGAFMGFMSVPLGIGGGSLGVPFMRLFG 180

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL-PPWSLGFVNIGAVLIILPISILIT 248
             I +A  TSA +  +I+        +SG   +    P S+G+VNI   L+ +P+++ + 
Sbjct: 181 YPIREAIGTSAAIGFIISLFGASSMAFSGLMFSDFAAPLSVGYVNIPGFLVFVPVTMTMA 240

Query: 249 PLATKLSYMIGKKYLT 264
           P+  +L + I K  L+
Sbjct: 241 PIGARLVHSIDKNLLS 256


>gi|163747979|ref|ZP_02155307.1| hypothetical protein OIHEL45_19316 [Oceanibulbus indolifex HEL-45]
 gi|161378749|gb|EDQ03190.1| hypothetical protein OIHEL45_19316 [Oceanibulbus indolifex HEL-45]
          Length = 280

 Score =  110 bits (276), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 120/229 (52%), Gaps = 5/229 (2%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L  A    G+D +I M VA+GTSL  I  TS+ S   H + G I+M +LK W   L +
Sbjct: 40  PALYLALSTAGMDPAITMQVAVGTSLATIVFTSLSSGYGHFKRGAIDMDLLKLWAPSLLV 99

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW---GMVT 166
             V+ +L+  +V    L   FA    L+ I M+ R     +   P  + K IW   G++T
Sbjct: 100 GVVIGALLGGYVSGLILVAVFATVAALVAIDMIFRKT--KDDPTPRGFAKPIWAVLGVIT 157

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G LS  +G+GGG     L+ F G  I +A  TSA +  +I  P  +V   +G G  GLPP
Sbjct: 158 GGLSAMMGIGGGTIGVPLLNFLGYDIRRAVGTSAAIGFIIGLPGAVVYALTGLGAEGLPP 217

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +SLG+VN+ A  II+P++     +  KL++ I ++ L   F + +  TS
Sbjct: 218 FSLGYVNLAAAAIIIPLTSSFAHVGVKLAHSIPRRALRFAFGIFLMITS 266


>gi|154248169|ref|YP_001419127.1| hypothetical protein Xaut_4249 [Xanthobacter autotrophicus Py2]
 gi|154162254|gb|ABS69470.1| protein of unknown function DUF81 [Xanthobacter autotrophicus Py2]
          Length = 307

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 144/251 (57%), Gaps = 6/251 (2%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+G ++G+ G+GGG V+VPVL + F  +G+DDS+ M + +GTSL +I PT++ S   H +
Sbjct: 52  LTGLIAGMLGIGGGGVIVPVLYEVFGALGVDDSLRMQLCVGTSLAIIIPTAISSHNAHMK 111

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA--FAIFCLLMGILMLKRDRLYC 149
            G +   ++++W  V  I  +VT   I+ V   ++ +A    +  LL    +L R+ +  
Sbjct: 112 KGAVLPGVVRNW-RVPAIAGIVTGSAIAAVVAGWVLQAVFVVVISLLGLKSLLGRNGIRI 170

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGV-GGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
               P       +G V G  S  +G+ GGGI TN+L+L YG  I+ A ATSAG+  +I  
Sbjct: 171 AEHLPGPGAMRAYGFVIGLASSLVGISGGGIATNILLL-YGVPIHAAVATSAGIGIIIPI 229

Query: 209 PALLVRIYSGWG-LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           P ++    +GW  L+ LPP SLG+V++   + I P++ L+ P   +L++ +G++ L IGF
Sbjct: 230 PGVIGYAIAGWPHLSQLPPLSLGYVSVIGFVCIAPVAALVAPFGARLAHRLGRRQLEIGF 289

Query: 268 SMIMFTTSFVF 278
            + +   +  F
Sbjct: 290 GLFLLLVASRF 300


>gi|114797241|ref|YP_761051.1| hypothetical protein HNE_2356 [Hyphomonas neptunium ATCC 15444]
 gi|114737415|gb|ABI75540.1| putative membrane protein [Hyphomonas neptunium ATCC 15444]
          Length = 314

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 127/249 (51%), Gaps = 10/249 (4%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGID-DSIC----MHVAMGTSLGVIAPTSVMSFMEHR 90
           ++GLFG+GGG V+VP L+    L+    D+I     MHVA+GTSL  I  TS+ S   H 
Sbjct: 24  VAGLFGIGGGFVVVPALASVLTLLSAGGDAIASDKIMHVAIGTSLATIIFTSLRSVQAHA 83

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISH-VDKSFLNKAFAIFCLLMG---ILMLKRDR 146
           + G ++ +ILK W   + +T VV  L ++  +D   L   F +   +M    +  +   R
Sbjct: 84  KRGAVDFEILKSWTPWV-VTGVVLGLFVAQYLDGHALKLTFGVGVFIMAWHFLFPVLTHR 142

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
                + P  +++   G V G     LG+GGG    L+M   G  +++A AT+AG   +I
Sbjct: 143 GPVANEMPKGFMRGGLGSVLGGYCTLLGIGGGTPAVLIMTLSGQPMHRAVATAAGFGTII 202

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           A P  +  I +G G +GLP  SLG+VNI A + I  +S++  P     ++ +   +L   
Sbjct: 203 AVPGTIGSIIAGLGQSGLPFGSLGYVNIIAAVAITSMSMITAPWGVAAAHSLNAVHLRRA 262

Query: 267 FSMIMFTTS 275
             + +  TS
Sbjct: 263 LGLYLLVTS 271


>gi|327479075|gb|AEA82385.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 260

 Score =  109 bits (272), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 112/229 (48%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G L+GLFGVGGGL++VPVL  +F   G    I  H+A+GTSL  I  TSV S + H R 
Sbjct: 13  AGVLAGLFGVGGGLIIVPVLVFSFSAQGFSQDILTHLAVGTSLATIVFTSVNSIITHHRL 72

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           G +   ++    F + +   + SL  + +    L K   +F L M + M    R     +
Sbjct: 73  GAVRWPMVLWMTFGILLGAALGSLTAAAIQGPMLQKIIGVFALAMAVQMGFDLRPKATGR 132

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            P      + G+V G+ S   G+GGG  +   + +    + +A ATSA     IA    L
Sbjct: 133 VPGRPELSLVGVVIGWASAIFGIGGGSLSVPYLTWRSVPMQQAVATSAACGLPIAVAGAL 192

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             +  GW    LP WSLGFV + A+L I   S+    L  +L++ +  K
Sbjct: 193 SFMAVGWHEAHLPQWSLGFVYLPALLGIAATSMFFARLGARLAHRLSAK 241


>gi|146309229|ref|YP_001189694.1| hypothetical protein Pmen_4215 [Pseudomonas mendocina ymp]
 gi|145577430|gb|ABP86962.1| protein of unknown function DUF81 [Pseudomonas mendocina ymp]
          Length = 260

 Score =  109 bits (272), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 115/229 (50%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G L+GLFGVGGGL++VPVL  +F   G+   I  H+A+GTSL  I  TS+ S +EH R 
Sbjct: 13  AGVLAGLFGVGGGLIIVPVLVLSFTSQGMPSEILTHLAVGTSLATIVFTSINSLLEHHRK 72

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           G +   + +     + +   + +L  + +    L K    F +++ + +    +    R 
Sbjct: 73  GAVRWPLFRWLSLGILLGAALGALTAALIQGPLLQKIIGTFAIVIAVQLALDLKPRASRD 132

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            P      + G V G+ S   G+GGG  T   +++    + +A ATSA     IA    L
Sbjct: 133 VPGKPALAVAGGVIGWASAIFGIGGGSLTVPFLVWRSVPMQQAVATSAACGLPIAIAGAL 192

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             +++GWG   LP WS+GF+ + A+L I   S+       +L++ +  +
Sbjct: 193 SFMFTGWGNPNLPQWSVGFIYLPALLGIALTSMFFARFGARLAHRLSPR 241


>gi|146280807|ref|YP_001170960.1| hypothetical protein PST_0412 [Pseudomonas stutzeri A1501]
 gi|145569012|gb|ABP78118.1| putative membrane protein [Pseudomonas stutzeri A1501]
          Length = 303

 Score =  109 bits (272), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 112/229 (48%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G L+GLFGVGGGL++VPVL  +F   G    I  H+A+GTSL  I  TSV S + H R 
Sbjct: 56  AGVLAGLFGVGGGLIIVPVLVFSFSAQGFSQDILTHLAVGTSLATIVFTSVNSILTHHRL 115

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           G +   ++    F + +   + SL  + +    L K   +F L M + M    R     +
Sbjct: 116 GAVRWPMVLWMTFGILLGAALGSLTAAAIQGPMLQKIIGVFALAMAVQMGFDLRPKATGR 175

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            P      + G+V G+ S   G+GGG  +   + +    + +A ATSA     IA    L
Sbjct: 176 VPGRPELSLVGVVIGWASAIFGIGGGSLSVPYLTWRSVPMQQAVATSAACGLPIAVAGAL 235

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             +  GW    LP WSLGFV + A+L I   S+    L  +L++ +  K
Sbjct: 236 SFMAVGWHEAHLPQWSLGFVYLPALLGIAATSMFFARLGARLAHRLSAK 284


>gi|254293953|ref|YP_003059976.1| hypothetical protein Hbal_1591 [Hirschia baltica ATCC 49814]
 gi|254042484|gb|ACT59279.1| protein of unknown function DUF81 [Hirschia baltica ATCC 49814]
          Length = 274

 Score =  108 bits (271), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 120/235 (51%), Gaps = 2/235 (0%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           VGGG+++VP L   F  +G  ++  MHV++GTSL  I  TS+ S + H   G ++  ILK
Sbjct: 31  VGGGIIIVPALYLTFSSLGFAET-AMHVSVGTSLATIIATSIRSVLSHNAKGAVDWNILK 89

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAF-AIFCLLMGILMLKRDRLYCERKFPDNYVKY 160
            W   + +     S + + +    L   F A+  LL   L+  R         P   + +
Sbjct: 90  LWGPFIILGAFAGSFLAAILSGRALTIFFGAVAFLLAAQLIFGRPSWKLASDIPSGPIAW 149

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
              +  G  S  +G+GGG+F    M+ YG SI++A  TSAG  ALI  PA++  + +GW 
Sbjct: 150 FISITIGLCSSLMGIGGGVFGVTTMVLYGRSIHQAIGTSAGFGALIGIPAVVGYVINGWY 209

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +  LPP S+G++N+   L+I  ++    P+   +++ +    L   F +++  T+
Sbjct: 210 VENLPPISIGYLNLPGFLLIALMTTSFAPIGAWIAHGLDAVRLRKIFGLLLICTA 264


>gi|104784146|ref|YP_610644.1| hypothetical protein PSEEN5236 [Pseudomonas entomophila L48]
 gi|95113133|emb|CAK17861.1| conserved hypothetical protein; putative membrane protein
           [Pseudomonas entomophila L48]
          Length = 260

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 124/247 (50%), Gaps = 2/247 (0%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G L+GLFGVGGG+++VPVL  +F L G D S+  H+A+GTSL  I  TS+ + +EH+R 
Sbjct: 13  AGVLAGLFGVGGGIIIVPVLVFSFTLQGFDPSVLTHLAVGTSLATIVFTSINAVLEHQRK 72

Query: 93  GTINMKILKDWIFV-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
           G +   I   W+ V + +  +V +   S +    L K   +F L++   M    +    R
Sbjct: 73  GAVQWPIFA-WMTVGILLGALVGAKTASLIQGPMLQKIIGVFALVIAAQMALDLKPKASR 131

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
             P        G V G+ S   G+GGG  T   + +    + +A ATS+     IA  + 
Sbjct: 132 GIPGKPGLTAAGGVIGWASAIFGIGGGSLTVPFLTWRSLPMQQAVATSSACGLPIALASA 191

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           L  ++ GW  + LP  S+G+V + A++ I   S+       +L++ +  + L   F+ ++
Sbjct: 192 LSFMWLGWHEDHLPAHSVGYVYLPALVGIAVTSMFFARFGARLAHKLSPRVLKRLFAALL 251

Query: 272 FTTSFVF 278
           F     F
Sbjct: 252 FCVGLSF 258


>gi|260427856|ref|ZP_05781835.1| membrane protein [Citreicella sp. SE45]
 gi|260422348|gb|EEX15599.1| membrane protein [Citreicella sp. SE45]
          Length = 274

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 9/213 (4%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
           FQ++G D    M V + TSL  I  TS+ S + H R G ++ +ILK W   + +  +V  
Sbjct: 44  FQMLGYDGPQTMQVCLATSLATIIVTSLRSVIGHNRKGAVDWEILKGWAPGIVVGAIVGV 103

Query: 116 LMISHVDKSFLNKAFAIFCLLM-GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALG 174
           L  S +  S L   F +  L++ G ++L +       + PD   ++++    GFLS  +G
Sbjct: 104 LAASALKSSTLQAIFGVLALIIGGYMLLGKTSWRIADRMPDGGKQHLYSPFVGFLSVLMG 163

Query: 175 VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPA----LLVRIYSGWGLNGLPPWSLG 230
           +GGG F   LM  +  +I++A AT+AG   LIA P+    L++ I  G      PP++LG
Sbjct: 164 IGGGSFGVPLMNLHNVAIHRAVATAAGFGVLIAVPSAVGFLMLTIEPG----SRPPYTLG 219

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            VN+   L+++ +++L  PL  K+++ +    L
Sbjct: 220 AVNLPGFLVVIAMTLLTAPLGVKIAHAMNPAPL 252


>gi|77461596|ref|YP_351103.1| hypothetical protein Pfl01_5375 [Pseudomonas fluorescens Pf0-1]
 gi|77385599|gb|ABA77112.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 260

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 122/247 (49%), Gaps = 2/247 (0%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G L+GLFGVGGG+++VPVL  +F L G D SI  H+A+GTSL  I  TSV +  EH R 
Sbjct: 13  AGVLAGLFGVGGGIIIVPVLVFSFTLQGFDPSILTHLAVGTSLATIIFTSVNAVREHHRR 72

Query: 93  GTINMKILKDWIFV-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
           G +   I + W+ V + +     +L    +    L K   +F L++   +    +    R
Sbjct: 73  GAVRWPIFR-WMTVGILLGAGFGALTAEAISGPNLQKIIGVFALVIAAQLALDVKPKASR 131

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
             P      + G V G+ S   G+GGG  T   + +    + +A ATS+     IA  + 
Sbjct: 132 TVPGKLGLTVAGSVIGWASAIFGIGGGSLTVPFLTWRSVPMQQAVATSSACGLPIAVASA 191

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +  +  GW    LP  SLGFV + A+L I   S++   L  +L++ +  K L   F+ ++
Sbjct: 192 ISFMILGWHDPLLPAHSLGFVYLPALLGIALTSMVFARLGARLAHRLSPKLLKRLFAALL 251

Query: 272 FTTSFVF 278
           F     F
Sbjct: 252 FCVGLSF 258


>gi|170719509|ref|YP_001747197.1| hypothetical protein PputW619_0322 [Pseudomonas putida W619]
 gi|169757512|gb|ACA70828.1| protein of unknown function DUF81 [Pseudomonas putida W619]
          Length = 260

 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 122/247 (49%), Gaps = 2/247 (0%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G L+GLFGVGGG+++VPVL  +F L G D S+  H+A+GTSL  I  TS+ + +EH R 
Sbjct: 13  AGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLATIVFTSINAVLEHHRR 72

Query: 93  GTINMKILKDWIFV-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
           G +   I   W+ V + +   V +   S +    L K   +F L++   M    +    R
Sbjct: 73  GAVQWPIFA-WMTVGILLGAGVGAKTASLIQGPLLQKIIGVFALIIAAQMALDLKPKASR 131

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
             P        G V G+ S   G+GGG  T   + +    + +A ATS+     IA  + 
Sbjct: 132 GIPGKPALIGAGGVIGWASAIFGIGGGSLTVPFLTWRSLPMQQAVATSSACGLPIAVASA 191

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           L  ++ GW    LP  S+GFV + A++ I   S+       +L++ +  + L   F+ ++
Sbjct: 192 LSFMWLGWHDEHLPAHSVGFVYLPALVGIAVTSMFFARFGARLAHKLSPRLLKRLFAALL 251

Query: 272 FTTSFVF 278
           F+    F
Sbjct: 252 FSVGLSF 258


>gi|325275837|ref|ZP_08141699.1| hypothetical protein G1E_20656 [Pseudomonas sp. TJI-51]
 gi|324099033|gb|EGB97017.1| hypothetical protein G1E_20656 [Pseudomonas sp. TJI-51]
          Length = 260

 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 117/246 (47%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G L+GLFGVGGG+++VPVL  +F L G D S+  H+A+GTSL  I  TS+ + +EH R 
Sbjct: 13  AGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLATIVFTSINAVLEHHRK 72

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           G +   I       + +   V +   S +    L K   +F L++   M    +      
Sbjct: 73  GAVQWPIFAWMTLGILLGAGVGAKTASLIQGPLLQKIIGVFALVIAAQMALDLKPKASHG 132

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            P   V    G V G+ S   G+GGG  T   +      + +A ATS+     IA  + L
Sbjct: 133 VPGKPVLVGAGGVIGWASAIFGIGGGSLTVPFLTSRSLPMQQAVATSSACGLPIAMASAL 192

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             +  GW    LPP SLG+V + A++ I   S+       +L++ +  + L   F+ ++F
Sbjct: 193 SFMLLGWHEQHLPPHSLGYVYLPALVGIAVTSMFFARFGARLAHKLSPRLLKRLFAAVLF 252

Query: 273 TTSFVF 278
                F
Sbjct: 253 CVGLSF 258


>gi|70733182|ref|YP_262955.1| hypothetical protein PFL_5897 [Pseudomonas fluorescens Pf-5]
 gi|68347481|gb|AAY95087.1| membrane protein, putative [Pseudomonas fluorescens Pf-5]
          Length = 260

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 123/247 (49%), Gaps = 2/247 (0%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G L+GLFGVGGG+++VPVL  +F L G D S+  H+A+GTSL  I  TSV +  EH R 
Sbjct: 13  AGVLAGLFGVGGGIIIVPVLVFSFTLQGFDVSVLTHLAVGTSLASIIFTSVNAVREHHRR 72

Query: 93  GTINMKILKDWIFV-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
           G +   I   W+ V + +     +L    +    L K   +F L++ + M    +    R
Sbjct: 73  GAVRWPIFA-WMTVGILLGAGFGALTAEAISGPHLQKIIGVFALVVALQMTLELKPKASR 131

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
           + P        G V G+ S   G+GGG  T   + +   ++ +A ATS+     IA  + 
Sbjct: 132 QVPGKLGLTAAGGVIGWASAIFGIGGGSLTVPFLTWRSVAMQQAVATSSACGLPIALASA 191

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           L  +  GW    LP  SLGFV + A+L I   S++   +  +L++ +  + L   F+ ++
Sbjct: 192 LSFMILGWHDPLLPAHSLGFVYLPALLGIALTSMVFARIGARLAHKLSPRLLKRMFAALL 251

Query: 272 FTTSFVF 278
           F     F
Sbjct: 252 FCVGLSF 258


>gi|328545124|ref|YP_004305233.1| hypothetical protein [polymorphum gilvum SL003B-26A1]
 gi|326414866|gb|ADZ71929.1| Conserved domain protein, putative [Polymorphum gilvum SL003B-26A1]
          Length = 275

 Score =  106 bits (264), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 112/223 (50%), Gaps = 1/223 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   F  +GI+ ++ MH+A+GTSL  I  T   S + H R G+++M +LK W   +  
Sbjct: 40  PVLYYMFTALGIEQAVLMHLAVGTSLATIVATGTSSALAHHRRGSVDMALLKRWWLPIAA 99

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
             +  + +  ++    L   F +  L +   ++L+R+      + P   ++   G   G 
Sbjct: 100 GVLAGATLAGNLSGGALTLVFGVVALAVAANMLLRREGSALAERLPGTPLREALGFFIGS 159

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+GGG     ++  +   I  A  T+A +  +IA P  L+ ++ G  +   PP S
Sbjct: 160 VSVMMGIGGGTLGVPILTLFSYPIRMAVGTAAAIGLIIAVPGTLMSVWYGLDVPNRPPLS 219

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           LG+VN+    +I+P S+   PL  ++++ I    L + F++ +
Sbjct: 220 LGYVNLVGFFLIIPASVYAAPLGARIAHAIPPARLRLVFALFL 262


>gi|167036183|ref|YP_001671414.1| hypothetical protein PputGB1_5196 [Pseudomonas putida GB-1]
 gi|166862671|gb|ABZ01079.1| protein of unknown function DUF81 [Pseudomonas putida GB-1]
          Length = 260

 Score =  105 bits (261), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 117/246 (47%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G L+GLFGVGGG+++VPVL  +F L G D S+  H+A+GTSL  I  TS+ + +EH R 
Sbjct: 13  AGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLATIVFTSINAVLEHHRK 72

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           G +   I       + +   V +   S +    L K   +F L++   M    +    R 
Sbjct: 73  GAVQWPIFAWMTLGILLGAGVGAKTASLIQGPLLQKIIGVFALVIAAQMALGLKPKASRG 132

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            P        G V G+ S   G+GGG  T   + +    + +A ATS+     IA  + L
Sbjct: 133 IPGKPALVGAGGVIGWASAIFGIGGGSLTVPFLTWRSLPMQQAVATSSACGLPIALASAL 192

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             +  GW    LP  SLG+V + A++ I   S+       +L++ +  + L   F+ ++F
Sbjct: 193 SFMLLGWHEEHLPAHSLGYVYLPAMIGIAVTSMFFARFGARLAHKLSPRLLKRLFAALLF 252

Query: 273 TTSFVF 278
                F
Sbjct: 253 CVGLSF 258


>gi|126736855|ref|ZP_01752590.1| hypothetical protein RSK20926_10509 [Roseobacter sp. SK209-2-6]
 gi|126721440|gb|EBA18143.1| hypothetical protein RSK20926_10509 [Roseobacter sp. SK209-2-6]
          Length = 274

 Score =  105 bits (261), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 118/229 (51%), Gaps = 5/229 (2%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L  A  L G++ ++ M VA+GTSL  I  T++ S   H R G I+M +LK W   + +
Sbjct: 38  PALYLALSLTGMEPALTMQVAVGTSLATIVFTALSSGYGHYRKGAIDMSLLKLWAPSILL 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW---GMVT 166
             V+  L+   V    L   FA    L+ + M+ R     +   P ++ K +W   G++ 
Sbjct: 98  GVVLGGLLGGVVSGKVLIAVFATVAALVALDMVLRKG--ADSPTPKSFSKPVWATLGVLA 155

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  +G+GGG     ++ F G  I KA  TSA +  +I  P  L+ + +G+G  GLP 
Sbjct: 156 GAISAMMGIGGGTVCVPMLNFLGYDIRKAVGTSAAIGFVIGVPGALIYMATGFGAEGLPA 215

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +S G+VN+    +I+P+S     +  KL++ I +  L + F + +  TS
Sbjct: 216 FSFGYVNLFCAAVIIPLSTSFARVGVKLAHSIPRPALRLAFGLFLALTS 264


>gi|78222746|ref|YP_384493.1| hypothetical protein Gmet_1534 [Geobacter metallireducens GS-15]
 gi|78194001|gb|ABB31768.1| protein of unknown function DUF81 [Geobacter metallireducens GS-15]
          Length = 263

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 131/254 (51%), Gaps = 10/254 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++  I + +F +G  +GLFGVGGGL++VP+L+  F    + +   +H+A+GTSL  I  T
Sbjct: 4   WLTYITIGTF-AGLSAGLFGVGGGLIIVPILTFMFTAQHLPEEHILHLALGTSLACIMFT 62

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H RHG ++  +++   F +   T   S + + +   FL   F +F   +   M
Sbjct: 63  SISSLRAHHRHGAVDWAVVRRISFGIIAGTYTGSWVAAQLSTRFLKGFFVLFLYYIATRM 122

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L   +    R+ P     +  G + G +S  +G+GGG  +   +++   + ++A  TSA 
Sbjct: 123 LLDIKPKPHRQLPGRTALFGVGGLIGCVSSLVGIGGGSMSVPFLVWCNVAFHRAIGTSAA 182

Query: 202 VSALIAFPALLVRIYSGWGLNG----LPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +   IA    +     G+ +NG    LPP S GFV + A+  I+  SI+  PL  KL++ 
Sbjct: 183 IGFPIALAGAV-----GYVINGLQVPLPPHSFGFVYLPALFGIVVASIVTAPLGAKLAHN 237

Query: 258 IGKKYLTIGFSMIM 271
           +    L + FS+++
Sbjct: 238 LPIYKLRLVFSLLV 251


>gi|259416485|ref|ZP_05740405.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
 gi|259347924|gb|EEW59701.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
          Length = 278

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 121/230 (52%), Gaps = 7/230 (3%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L  A  L G+D ++ M VA+GTSL  I  T++ S   H + G I+M +LK W   +  
Sbjct: 38  PALYFALGLTGMDPALTMQVAVGTSLATIVFTALSSGYGHYKKGAIDMALLKLWAPSILG 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIW---GMV 165
             V+  ++   V  + L   FA   + + + L+L++ +   E   P ++ K +W   G+ 
Sbjct: 98  GVVIGGVLGGLVSGNVLLIVFATIAMAVALDLILRKPK---ESPEPRSFSKPVWAALGVF 154

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            G +S  +G+GGG      + F G  I KA  TSA +  +I  P  ++ + +G+G  GLP
Sbjct: 155 AGAVSAMMGIGGGSVCVPTLSFLGYDIRKAVGTSAAIGFIIGLPGAIIYMATGFGAEGLP 214

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           P SLG+VN+    +I+P+S     +  KL++ I ++ L + F + +  TS
Sbjct: 215 PLSLGYVNLLLAAVIIPLSTTFARVGVKLAHSIPRRALKLSFGLFLMATS 264


>gi|152994490|ref|YP_001339325.1| hypothetical protein Mmwyl1_0453 [Marinomonas sp. MWYL1]
 gi|150835414|gb|ABR69390.1| protein of unknown function DUF81 [Marinomonas sp. MWYL1]
          Length = 272

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 4/227 (1%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   +Q MG+     M VA  TSL  I PTS+ S   H+  G ++  +LK W F +  
Sbjct: 38  PVLYFLYQGMGVSADSAMLVATATSLATIIPTSISSIRSHKAKGNVDFDLLKRWGFFIFA 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKYIWGMVTG 167
             +V S +++ VD  +L+  F +   L  + ML  K+D ++  +  P N  + +     G
Sbjct: 98  GVMVGSFVVTRVDGQWLSLLFGVIATLSALNMLLGKKDSVF--KSLPGNAGQSVMATCIG 155

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           F S  +G+GGG  T   + F     ++A  T+A V  +I+ PA L  +  G      P  
Sbjct: 156 FFSSMVGIGGGTLTVPTLTFCNYPAHRAVGTAAAVGLIISLPAALTMLIFGQSPVDAPYG 215

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           ++G VN+  V+ I+P+++L  P+   L++ +    L   F++++  T
Sbjct: 216 TVGLVNLIGVICIIPLTVLFAPVGAGLAHRLDASKLKKVFAVVLIFT 262


>gi|296271745|ref|YP_003654376.1| hypothetical protein Arnit_0204 [Arcobacter nitrofigilis DSM 7299]
 gi|296095920|gb|ADG91870.1| protein of unknown function DUF81 [Arcobacter nitrofigilis DSM
           7299]
          Length = 268

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 120/224 (53%), Gaps = 2/224 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L   F  + ID ++ + +++GTSL  I  TS+MS   H + G I+  + K WI ++ I
Sbjct: 35  PMLYHIFIYLNIDITVAIPLSIGTSLSTIVVTSIMSARSHHKKGGIDWDLTKRWIPLVII 94

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM--LKRDRLYCERKFPDNYVKYIWGMVTG 167
             ++ S    ++D S L   F I  +++ + M       +   ++ P N+ + I+G++ G
Sbjct: 95  GVLIGSFSSKYIDASTLKFMFGILLVVVSLNMIISSFKSIIIAKQLPGNFGQSIFGLLLG 154

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
             +  LG+GGG     L+  +   I+KA +T++    +I+ PA +  I  GWG   LP  
Sbjct: 155 GFASLLGIGGGTLMVPLLTLFSYPIHKAVSTASIFGLVISIPATIGYIIVGWGAPNLPVG 214

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           S G+VN    + ++P++++  PL  KL+Y +  K L + F++ +
Sbjct: 215 STGYVNWIGFIALVPMTMIFAPLGVKLAYRLNVKQLKVAFAVFL 258


>gi|229593187|ref|YP_002875306.1| hypothetical protein PFLU5817 [Pseudomonas fluorescens SBW25]
 gi|229365053|emb|CAY53235.1| conserved hypothetical membrane protein [Pseudomonas fluorescens
           SBW25]
          Length = 260

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 120/247 (48%), Gaps = 2/247 (0%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G L+GLFGVGGG+++VPVL  +F L G D  +  H+A+GTSL  I  TSV +  EH R 
Sbjct: 13  AGVLAGLFGVGGGIIIVPVLVFSFTLQGFDPQVLTHLAVGTSLATIIFTSVNAVREHHRR 72

Query: 93  GTINMKILKDWIFV-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
           G +   I   W+ V + +     +L    +    L K   +F LL+ + +    +    R
Sbjct: 73  GAVRWPIFV-WMTVGILLGAGFGALTAEAISGPHLQKIIGVFALLVAVQLALEVKPKASR 131

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
             P      + G V G+ S   G+GGG  T   + +    + +A ATS+     IA  + 
Sbjct: 132 TVPGKVGLTLAGTVIGWASAIFGIGGGSLTVPFLTWRSVPMQQAVATSSACGLPIALASA 191

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           L  +  GW    LP  SLGFV + A+L I   S++      +L++ +  + L   F+ ++
Sbjct: 192 LSFMILGWHDPLLPAHSLGFVYLPALLGIALTSMVFARFGARLAHRLSPRLLKRLFAGLL 251

Query: 272 FTTSFVF 278
           F     F
Sbjct: 252 FCVGINF 258


>gi|257454094|ref|ZP_05619368.1| hypothetical protein ENHAE0001_0956 [Enhydrobacter aerosaccus SK60]
 gi|257448572|gb|EEV23541.1| hypothetical protein ENHAE0001_0956 [Enhydrobacter aerosaccus SK60]
          Length = 270

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 120/239 (50%), Gaps = 3/239 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y+  ++  +F +GT +GLFGVGGGL++VPVL   F+  G    +  H+A+GTSL  I  T
Sbjct: 3   YLWFLLAGAF-AGTCAGLFGVGGGLIIVPVLMAIFKAYGYPSDVITHLAVGTSLATIVVT 61

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H + G +   + ++    L + + V + +   +    L    A   L MG+ M
Sbjct: 62  SISSMQSHNKRGGVRWDVWRNMSIGLVVGSFVGAYIADLLHGKVLAFLIAGMALFMGLKM 121

Query: 142 L--KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
           L  K+  +      P   V+   G + G  S   G+GGG FT   +  +G ++ +A  TS
Sbjct: 122 LLAKKSEVVATTHLPSAPVQTGVGGLIGAASAIFGIGGGSFTVPFLSRFGLTMQQAVGTS 181

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           A     IA    L  ++ G  + GLP  ++GFV+I A L I  +S L   +  KL++ +
Sbjct: 182 AACGLPIAIAGALGFMFFGKDVQGLPAEAIGFVHITAFLCISVMSYLFAKVGAKLAHQL 240


>gi|149377243|ref|ZP_01894990.1| predicted Permease [Marinobacter algicola DG893]
 gi|149358431|gb|EDM46906.1| predicted Permease [Marinobacter algicola DG893]
          Length = 264

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 121/256 (47%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L +V   L+GT++GLFG+GGGLV+VPVL  +F L G+   I  H+A+GTSL  I  TS
Sbjct: 7   VGLYLVLGALAGTMAGLFGIGGGLVIVPVLIFSFDLQGVSGDIAAHLAVGTSLATIVFTS 66

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H  HG +  +I +     + +  V+ +   S +    L     +F +L+ + ML
Sbjct: 67  ISSIRSHHLHGAVRWEIFRPMTAGIVLGAVLGAWTASMLSGEALELVIGVFVILVALKML 126

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
                   R  P +      G   G+ S   G+GGG  T   + +    + +A  TSA  
Sbjct: 127 FGANPKPGRDVPGSVGLGSAGASIGWASAIFGIGGGTLTVPFLSWCNVRMQQAVGTSAAC 186

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA    L  I +GW    LP  S+GF+ + A + I+  S+L   +   L++ +    
Sbjct: 187 GLPIAVAGALANIATGWQNPELPELSIGFIYLPAFVGIVLTSVLFARVGANLAHRLDAAL 246

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F++ +      F
Sbjct: 247 LKKIFAIFLIVVGIRF 262



 Score = 36.2 bits (82), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 20/121 (16%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G  S +FG+GGG + VP LS          ++ M  A+GTS     P +V   + +   G
Sbjct: 151 GWASAIFGIGGGTLTVPFLSWC--------NVRMQQAVGTSAACGLPIAVAGALANIATG 202

Query: 94  TINMKI--LKDWIFVLP--ITTVVTSLMISHV--------DKSFLNKAFAIFCLLMGILM 141
             N ++  L      LP  +  V+TS++ + V        D + L K FAIF +++GI  
Sbjct: 203 WQNPELPELSIGFIYLPAFVGIVLTSVLFARVGANLAHRLDAALLKKIFAIFLIVVGIRF 262

Query: 142 L 142
           L
Sbjct: 263 L 263


>gi|114764120|ref|ZP_01443359.1| membrane protein [Pelagibaca bermudensis HTCC2601]
 gi|114543478|gb|EAU46493.1| membrane protein [Roseovarius sp. HTCC2601]
          Length = 274

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 11/207 (5%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
           FQ +G D    M V + TSL  I  TS+ S + H R G ++  ILK W   + I  ++  
Sbjct: 44  FQALGYDGPQTMQVCLATSLATIIVTSLRSVVSHNRKGAVDWDILKGWAPGIVIGAIIGV 103

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKYIWGMVTGFLSGAL 173
           L  S +  + L   F +  L++G  M   KR     E   P    +YI+    GFLS  +
Sbjct: 104 LAASALKSTSLQVIFGVLALVIGAYMTFGKRSWRLAE-AMPSGGKQYIYSPAVGFLSVLM 162

Query: 174 GVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPA----LLVRIYSGWGLNGLPPWSL 229
           G+GGG F   LM  +   I++A AT+AG   LIA P+    LL+ I  G      PP+++
Sbjct: 163 GIGGGSFGVPLMSLHNVPIHRAVATAAGFGVLIAVPSAVGFLLLTIEPG----SRPPFTI 218

Query: 230 GFVNIGAVLIILPISILITPLATKLSY 256
           G VN+   L+++ +++L  PL  KL++
Sbjct: 219 GAVNLPGFLVVIAMTLLTAPLGVKLAH 245


>gi|313501118|gb|ADR62484.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 260

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 117/246 (47%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G L+GLFGVGGG+++VPVL  +F L G D S+  H+A+GTSL  I  TS+ +  EH R 
Sbjct: 13  AGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLATIVFTSINAVREHHRK 72

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
             +   I     F + +   V +   S +    L K   +F L++   M    +    R 
Sbjct: 73  RAVQWPIFVWMTFGILLGAGVGAKTASLIQGPLLQKIIGVFALVIAAQMALDLKPKASRG 132

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            P        G V G+ S   G+GGG  T   + +    + +A ATS+     IA  + L
Sbjct: 133 VPGKPGLIGAGGVIGWASAIFGIGGGSLTVPFLTWRSLPMQQAVATSSACGLPIAVASAL 192

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             +  GW    LPP SLG+V + A++ I   S+       +L++ +  + L   F+ ++F
Sbjct: 193 SFMLLGWHEAHLPPHSLGYVYLPALVGIAVTSMFFARFGARLAHKLSPRLLKRLFAALLF 252

Query: 273 TTSFVF 278
                F
Sbjct: 253 CVGLSF 258


>gi|254483115|ref|ZP_05096349.1| conserved domain protein, putative [marine gamma proteobacterium
           HTCC2148]
 gi|214036637|gb|EEB77310.1| conserved domain protein, putative [marine gamma proteobacterium
           HTCC2148]
          Length = 274

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 116/227 (51%), Gaps = 1/227 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL  A  + G+D +I MHVA+GTSL  I  TS+ S   H   G ++M ++K W   + +
Sbjct: 36  PVLDTALAIRGVDPAIRMHVAVGTSLATIIFTSMSSARAHHAQGAVDMDLVKLWGPFIFV 95

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
            +++ S+  + V  + L   F +  LL+ I M L  D     ++ P      I     G 
Sbjct: 96  GSLMGSVAAAQVQSAVLAGIFGVVALLIAIQMLLPLDNYRPWKQVPKGAGSIITPTFIGG 155

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F+   +      I++A  T++    LIA P  +  I +G G   LP  +
Sbjct: 156 LSAMMGIGGGTFSVATLTMMSQPIHRAVGTASLFGLLIAVPGTIGFIINGLGDPRLPAAN 215

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            G+VN   V +I P+++L+ P+  + ++ + K+ L++ F + +   +
Sbjct: 216 FGYVNWIGVALIAPMTMLMAPIGARAAHKLSKRALSLAFGVFLLVVA 262


>gi|330806920|ref|YP_004351382.1| hypothetical protein PSEBR_a244 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375028|gb|AEA66378.1| Conserved hypothetical protein; putative membrane protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 260

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 121/247 (48%), Gaps = 2/247 (0%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G L+GLFGVGGG+++VPVL  +F L G D  +  H+A+GTSL  I  TSV +  EH+R 
Sbjct: 13  AGVLAGLFGVGGGIIIVPVLVFSFTLQGFDPQVLTHLAVGTSLASIIFTSVNAVREHQRK 72

Query: 93  GTINMKILKDWIFV-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
           G +   I   W+ V + I     ++    +    L K   +F L++ + +    +    R
Sbjct: 73  GAVRWPIFA-WMTVGILIGAGFGAITAEAISGPHLQKIIGVFALIVAVQLALDFKPNASR 131

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
             P      + G V G+ S   G+GGG  T   + +    + +A ATS+     IA  + 
Sbjct: 132 SVPGKAGLTLAGTVIGWASAIFGIGGGSLTVPFLTWRSVPMQQAVATSSACGLPIAVVSA 191

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           L  +  GW    LP  SLGFV + A+L I   S++      +L++ +  + L   F+ ++
Sbjct: 192 LSFMILGWHDPLLPAHSLGFVYLPALLGIALTSMVFARFGARLAHRLSPRLLKRLFAALL 251

Query: 272 FTTSFVF 278
           F     F
Sbjct: 252 FCVGLSF 258


>gi|53802665|ref|YP_112564.1| hypothetical protein MCA0023 [Methylococcus capsulatus str. Bath]
 gi|53756426|gb|AAU90717.1| putative membrane protein [Methylococcus capsulatus str. Bath]
          Length = 294

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 120/243 (49%), Gaps = 3/243 (1%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+G  SGLFG+GGG ++VP L   F   G+ +SI M +A+ TSL  I  TSV S   H R
Sbjct: 14  LAGVASGLFGIGGGAIIVPFLVWLFPGQGVPESILMIMAVATSLATIVVTSVASVRAHHR 73

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYC 149
            G +   ++   +  + + TV  S++  H+      + FA+F +L+ + +   +R+    
Sbjct: 74  RGAVVWPLVWRLVPGIALGTVAGSIVADHLPTRQFERLFAVFLMLVAVQVYRGRREETAG 133

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
           E+  P   V    G++ G LS   G+GGG  T   +L    +I  A A S+     IA  
Sbjct: 134 EKPVPPG-VMTGGGIMIGLLSALFGIGGGSITVPFLLRCRQNIRHAVAVSSACGFPIAVV 192

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             L  +  GWG   LP  SLG++   A L I   S+L  P    L++ +  + L   F+ 
Sbjct: 193 GTLSYVVLGWGHPSLPAHSLGYIYWPAFLGIGAASVLTAPYGAALAHRLPMRGLKRLFAA 252

Query: 270 IMF 272
           ++F
Sbjct: 253 VLF 255


>gi|84499206|ref|ZP_00997494.1| membrane protein [Oceanicola batsensis HTCC2597]
 gi|84392350|gb|EAQ04561.1| membrane protein [Oceanicola batsensis HTCC2597]
          Length = 273

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 1/208 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AFQ +G D    M + + TSL  I  TS+ S   H R G ++  IL+ W   + I
Sbjct: 37  PAFFYAFQSLGFDGDKLMQLCLATSLATIIVTSLRSVQSHHRKGAVDWDILRGWGPGIAI 96

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V+  L  + +    L   F I  +++G+ L L R         P   V+++   + GF
Sbjct: 97  GAVIGVLAAAALRSDALQALFGILAMVIGLYLSLGRSDWRIAEAMPTGPVRWLLSPLVGF 156

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  YG  I++A AT+AG   +IA P+++  +         PP +
Sbjct: 157 LSVLMGIGGGSFGVPLMTLYGRPIHRAVATAAGFGVIIAVPSVIGFLLVSLPAETRPPLT 216

Query: 229 LGFVNIGAVLIILPISILITPLATKLSY 256
           +G VN+ A  +++ ++++  PL  +L++
Sbjct: 217 IGAVNLPAFAVVIAMTLITAPLGARLAH 244


>gi|120555345|ref|YP_959696.1| hypothetical protein Maqu_2434 [Marinobacter aquaeolei VT8]
 gi|120325194|gb|ABM19509.1| protein of unknown function DUF81 [Marinobacter aquaeolei VT8]
          Length = 265

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 119/244 (48%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT 94
           T++GLFG+GGGLV+VPVL  +F L GI   I  H+A+GTSL  I  TS+ S   H +HG 
Sbjct: 19  TMAGLFGIGGGLVIVPVLIFSFGLQGISPEIAAHLAVGTSLATIVFTSISSIRTHHQHGA 78

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
           +   + +   F + +  V+ +   + +    L     +F +L+ + M+        R  P
Sbjct: 79  VRWDLFRPMTFGIVVGAVLGAWTAAMLSGPVLETIIGVFVILVALKMILEVNPKPGRDVP 138

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
                   G + G+ S   G+GGG  T   + +    + +A ATSA     IA    L  
Sbjct: 139 GTTGLGAAGGIIGWASAIFGIGGGTLTVPYLSWCNVKMQQAVATSAACGFPIAIAGALAN 198

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +++GW    LP  SLGF+ + A++ ++  S+    +   L++ +  + L   F++++   
Sbjct: 199 VWTGWQDPDLPELSLGFIYLPALVGVVATSVFFARIGAGLAHRLDGRLLKRIFAIMLVLV 258

Query: 275 SFVF 278
              F
Sbjct: 259 GLRF 262


>gi|256828364|ref|YP_003157092.1| hypothetical protein Dbac_0552 [Desulfomicrobium baculatum DSM
           4028]
 gi|256577540|gb|ACU88676.1| protein of unknown function DUF81 [Desulfomicrobium baculatum DSM
           4028]
          Length = 265

 Score =  103 bits (256), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 117/223 (52%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L    +L  +   + MH+A+GTS+  I  TSV SFM H R G +   +++  +  + +
Sbjct: 32  PMLVFCMELQNLPQDLIMHMALGTSMASIMFTSVSSFMAHHRRGAVEWDVVRRIVAGILV 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T + + + + +    L   F +F   +   ML   +    R  P     +  G V G +
Sbjct: 92  GTFLGAWVAAQMSTGALKIFFVVFLYYVCYQMLSGKKPKPSRVMPGAAGMFGAGNVIGVV 151

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   M+++   I+KA  TSA +   IA    +  I +GWG++ LPP+SL
Sbjct: 152 SSLVGIGGGTLSVPFMVWHNIPIHKAIGTSAAIGFPIAVAGTVGYIMNGWGVDTLPPYSL 211

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           G+V++ A++ I  +S++  PL  +L++ +    L   F++I+F
Sbjct: 212 GYVSLVALVSIAVMSVITAPLGVRLAHSLPVDKLKRVFALILF 254


>gi|78485755|ref|YP_391680.1| hypothetical protein Tcr_1412 [Thiomicrospira crunogena XCL-2]
 gi|78364041|gb|ABB42006.1| Conserved hypothetical protein with DUF81 [Thiomicrospira crunogena
           XCL-2]
          Length = 268

 Score =  103 bits (256), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 116/224 (51%), Gaps = 2/224 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L   F  + ID SI M +A+GTSL  I  TS+MS   H + G I+  ++K W+  + I
Sbjct: 35  PMLYHIFIYLNIDISIAMPLAIGTSLSTIVVTSIMSARSHHKKGGIDWDLVKVWLPFVII 94

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKYIWGMVTG 167
              + +   + +D   L   F +  L++ + M+   R  L   ++ P    + I+  + G
Sbjct: 95  GVFIGAFSANFIDGVTLKVMFGVLLLVISVHMIISIRRSLVIAKQLPSFPGQPIFATLIG 154

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
             S  LG+GGG     L+  +   I+KA +T++    +I+ PA L  I+ GW +  LP  
Sbjct: 155 TFSSILGIGGGTLMVPLLTLFSYPIHKAVSTASLFGLVISIPATLGYIFIGWDVPNLPTG 214

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           S G+VN    + ++P++++  PL  KL+Y +  K L   F++ +
Sbjct: 215 STGYVNWLGFIALVPMTMVFAPLGVKLAYFLNVKQLKTAFAIFL 258


>gi|99080207|ref|YP_612361.1| hypothetical protein TM1040_0366 [Ruegeria sp. TM1040]
 gi|99036487|gb|ABF63099.1| protein of unknown function DUF81 [Ruegeria sp. TM1040]
          Length = 278

 Score =  103 bits (256), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 119/231 (51%), Gaps = 7/231 (3%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L  A  L G+D ++ M VA+GTSL  I  T++ S   H + G I+M +LK W   +  
Sbjct: 38  PALYFALGLTGMDPALTMQVAVGTSLATIVFTALSSGYGHYKKGAIDMALLKLWAPSILG 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIW---GMV 165
             V+  ++   V    L   FA   + + + LML++     E   P ++ K +W   G+ 
Sbjct: 98  GVVIGGVLGGLVSGIVLLVVFATIAMAVALDLMLRKPNDSPE---PRSFSKPVWAALGVF 154

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            G +S  +G+GGG      + F G  I KA  TSA +  +I  P  ++ + +G+G  GLP
Sbjct: 155 AGSVSAMMGIGGGTVCVPTLSFLGYDIRKAVGTSAAIGFIIGLPGAVIYMATGFGAEGLP 214

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           P SLG+VN+    +I+P+S     +  KL++ I ++ L + F + +  TS 
Sbjct: 215 PLSLGYVNLLLAAVIIPLSTTFARVGVKLAHSIPRRALKLSFGVFLMATSL 265


>gi|296536289|ref|ZP_06898403.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
 gi|296263378|gb|EFH09889.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
          Length = 276

 Score =  102 bits (254), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 137/252 (54%), Gaps = 7/252 (2%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V   LSGTL+GL GVGGG+V+VPVL   F L+GI +++ M +A+GTSL  I PTS++S  
Sbjct: 19  VTGLLSGTLAGLLGVGGGIVIVPVLFNIFPLLGIPETVQMKLAVGTSLATIIPTSIVSAR 78

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
           +H   G I+  +LK     + I   + ++    +    L+  FA   LL+ + M      
Sbjct: 79  KHYAKGAIDTGLLKAIWPSMIIGVALGTVAAIWLHGDALSAVFATIALLVAVNM---GFT 135

Query: 148 YCERKFPDNYVK--YIWGM--VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             + K  D   +   +WG+    G +S  +G+GGG     ++  +G  I  A ATS+   
Sbjct: 136 GVDFKLRDTTPRGAGLWGIGGFIGTVSAMMGIGGGTVGVPILSMFGTPIRSAVATSSVFG 195

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            +I+ PA +  +Y GWG + LPP+SLG+VN+    +I+P SIL TP    L++ I    L
Sbjct: 196 LIISIPATIGFLYGGWGAHDLPPYSLGYVNLIGFALIVPSSILATPWGVHLAHTIPPLAL 255

Query: 264 TIGFSMIMFTTS 275
              F++ +  T+
Sbjct: 256 KRAFAVFLAITA 267


>gi|126732117|ref|ZP_01747919.1| hypothetical protein SSE37_14744 [Sagittula stellata E-37]
 gi|126707406|gb|EBA06470.1| hypothetical protein SSE37_14744 [Sagittula stellata E-37]
          Length = 272

 Score =  102 bits (253), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 112/224 (50%), Gaps = 5/224 (2%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL   F+ +G+ D+I M + +GTS   I  TS+ S   H R G + + IL+ W   L 
Sbjct: 36  VPVLLFIFRGLGVSDTIVMQLCVGTSTATIVATSIRSVWAHHRRGAVEVAILRAWAPWLA 95

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD---RLYCERKFPDNYVKYIWGMV 165
              ++  L  + +    L   F     LMGI ML  +   RL  E   P  YV Y   M 
Sbjct: 96  AGAILGVLTATSLKSDTLMLIFGGLATLMGIYMLAGNPDWRLGNEHPGPRVYVPYSGTM- 154

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            GF+   +G+GGG F    +  YG  I +A ATSAG   LI+ PA +  + +      LP
Sbjct: 155 -GFVCAMIGIGGGTFGVPALTAYGTPINRAIATSAGFGLLISLPASVTYLLASPKDLTLP 213

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           P+++G V++ A + I  ++ L  P+  +L++++    L   F++
Sbjct: 214 PFTMGLVSLPAFIAITAMTFLTVPIGARLTHVLPTGRLRQVFAL 257


>gi|257092761|ref|YP_003166402.1| hypothetical protein CAP2UW1_1142 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045285|gb|ACV34473.1| protein of unknown function DUF81 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 266

 Score =  102 bits (253), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 121/240 (50%), Gaps = 1/240 (0%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMG-IDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           +G  +G+ G+GGGLVMVP L+  F        S  +H+A+GTS+  I  T++ S   H R
Sbjct: 14  TGFFAGMLGIGGGLVMVPALTMMFAAQAAFPGSEILHLALGTSMATILFTALASLRAHHR 73

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
           HG +  +++      + + T++ +L  S +    L   F  F  L+ + M+   +    R
Sbjct: 74  HGAVLWRVVGQITPGILLGTLLGTLFASSIPARPLAIFFTAFVCLVAVQMILNLKPKPSR 133

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
             P        G+  G LS  + +GGG  T   + +    +  A  TSA V   IA    
Sbjct: 134 DLPGAAGVIAVGVGIGALSALVAIGGGSLTVPFLTWCNVRVQHAIGTSAAVGFPIAIGGS 193

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           L  IY+GWG  GLP WSLG++ + A + ++P S+LI PL  +L++ +    L   F++++
Sbjct: 194 LGYIYNGWGHPGLPEWSLGYIYLPAFVWLVPSSMLIAPLGARLAHRLPVATLKRLFAVVL 253


>gi|26991819|ref|NP_747244.1| hypothetical protein PP_5143 [Pseudomonas putida KT2440]
 gi|148550250|ref|YP_001270352.1| hypothetical protein Pput_5050 [Pseudomonas putida F1]
 gi|24986933|gb|AAN70708.1|AE016714_6 conserved hypothetical protein [Pseudomonas putida KT2440]
 gi|148514308|gb|ABQ81168.1| protein of unknown function DUF81 [Pseudomonas putida F1]
          Length = 260

 Score =  102 bits (253), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 116/246 (47%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G L+GLFGVGGG+++VPVL  +F L G D S+  H+A+GTSL  I  TS+ +  EH R 
Sbjct: 13  AGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLATIVFTSINAVREHHRK 72

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
             +   I       + +   V +   S +    L K   +F L++   M    +    R 
Sbjct: 73  RAVQWPIFIWMTIGILLGAGVGAKTASLIQGPLLQKIIGVFALVIAAQMALDLKPKASRG 132

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            P        G V G+ S   G+GGG  T   + +    + +A ATS+     IA  + L
Sbjct: 133 VPGKPGLIGAGGVIGWASAIFGIGGGSLTVPFLTWRSLPMQQAVATSSACGLPIAVASAL 192

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             +  GW    LPP SLG+V + A++ I   S+       +L++ +  + L   F+ ++F
Sbjct: 193 SFMLLGWHEEHLPPHSLGYVYLPALVGIAVTSMFFARFGARLAHKLSPRLLKRLFAALLF 252

Query: 273 TTSFVF 278
                F
Sbjct: 253 CVGLSF 258


>gi|83945622|ref|ZP_00957968.1| membrane protein [Oceanicaulis alexandrii HTCC2633]
 gi|83850988|gb|EAP88847.1| membrane protein [Oceanicaulis alexandrii HTCC2633]
          Length = 272

 Score =  101 bits (252), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 2/247 (0%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++ +I  ++     +G ++GLFG+GGG++MVP L      +G +    MH A+GTSL V
Sbjct: 4   SLIPFILALLAVGAFAGLIAGLFGIGGGIIMVPALYYVLTGLGYEAH-AMHAAVGTSLMV 62

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF-AIFCLL 136
           I  TS+ S   H + G ++ K+LK W   + +  ++ S +        L   F A+  LL
Sbjct: 63  IVATSLRSVAAHAQKGAVDFKVLKTWTPFIVLGALLGSAVADLAPGRALTGLFGAVALLL 122

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
                  R         P   +K + GM  G LS  +G+GGG+F   LM  +G +I+ A 
Sbjct: 123 SAQFFFGRPDWKLADDLPGQPMKTVLGMTIGILSSLMGIGGGVFGVTLMTLHGKTIHTAV 182

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           AT+AG    I  P  +  + +G       P+S+G+VN+ A + +   ++ + P+   L++
Sbjct: 183 ATAAGFGVAIGLPGAIGFMIAGLDEPARAPFSVGYVNMAAFVTLAASAVFLAPVGANLAH 242

Query: 257 MIGKKYL 263
            +  K L
Sbjct: 243 SLNPKRL 249


>gi|109898370|ref|YP_661625.1| hypothetical protein Patl_2053 [Pseudoalteromonas atlantica T6c]
 gi|109700651|gb|ABG40571.1| protein of unknown function DUF81 [Pseudoalteromonas atlantica T6c]
          Length = 274

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 1/226 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   FQ  G+     M++A GTSL  I PTS+ S   HR+ G ++  +LK W  ++ I
Sbjct: 39  PVLFFLFQSFGVSPESAMYIATGTSLATIIPTSISSIRSHRKKGNVDADLLKQWGLLILI 98

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGF 168
             ++ S +++ VD  +L   F I   L  + ML R  +       P    + I     GF
Sbjct: 99  GVLIGSWLVTKVDGRYLTTLFGIVATLSALNMLFRTGKSALANSLPGRIGQSIIAGCIGF 158

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
            S  +G+GGG  +  ++  +    +KA  T+A +  +I+FPA L  +  G      P  +
Sbjct: 159 FSSMVGIGGGTLSVPILTAFNYPAHKAVGTAAAIGLIISFPAALYLLIFGQTPQDAPLGT 218

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            G++N+     I+P++++  P+   ++  +    L   F++++  T
Sbjct: 219 FGYINLVGFACIVPLTVICAPIGAGIASKLDANMLKKIFAVVLLIT 264


>gi|293390606|ref|ZP_06634940.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290951140|gb|EFE01259.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 265

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 113/220 (51%), Gaps = 10/220 (4%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           CL+  A  ++G L+GLFG+GGGLV+VP+L     ++G+ DS+ M  A+GTS   I  T+ 
Sbjct: 8   CLL--AGCIAGFLAGLFGIGGGLVIVPMLVYLLPIVGVPDSLLMPTALGTSFATIVITAF 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM-----G 138
            S   H + G +    LK +   L I+  V+S  IS +     +K FA  CL+M      
Sbjct: 66  SSAQRHHKLGNVVWSTLKYFAPALMISAFVSSQYISKLPHEISSKLFA--CLVMYLAAKM 123

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           +L +K+  +   +K        I G + G  +   G+GGG F    +      I KA  T
Sbjct: 124 VLSIKQKHIDPNKKI-TPLASIIGGGLIGMAASVAGIGGGGFIVPFLNSRNVDIKKAIGT 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
           SA    L+    +L  + SGW   G+PP+S+GFV + AVL
Sbjct: 183 SAFCGMLMGIAGMLSFMVSGWNAPGMPPYSIGFVYLPAVL 222


>gi|261868756|ref|YP_003256678.1| hypothetical protein D11S_2105 [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261414088|gb|ACX83459.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 265

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 112/220 (50%), Gaps = 6/220 (2%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           CL+  A  ++G L+GLFG+GGGLV+VP+L     ++G+ DS+ M  A+GTS   I  T+ 
Sbjct: 8   CLL--AGCIAGFLAGLFGIGGGLVIVPMLVYLLPIVGVPDSLLMPTALGTSFATIVITAF 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG---IL 140
            S   H + G +    LK +   L I+  V+S  IS +     +K FA   + +    +L
Sbjct: 66  SSAQRHHKLGNVVWSTLKYFAPALMISAFVSSQYISKLPHEISSKLFACLVVYLAAKMVL 125

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
            +K+  +   +K        I G + G  +   G+GGG F    +      I KA  TSA
Sbjct: 126 SIKQKHIDPNKKI-TPLASIIGGGLIGMAASVAGIGGGGFIVPFLNSRNVDIKKAIGTSA 184

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
               L+    +L  + SGW   G+PP+S+GFV + AVL I
Sbjct: 185 FCGMLMGIAGMLSFMVSGWNAPGMPPYSIGFVYLPAVLSI 224


>gi|126665227|ref|ZP_01736210.1| hypothetical protein MELB17_19204 [Marinobacter sp. ELB17]
 gi|126630597|gb|EBA01212.1| hypothetical protein MELB17_19204 [Marinobacter sp. ELB17]
          Length = 265

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 117/240 (48%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+G+L+GLFG+GGGLV+VPVL  +F   G    I  H+A+GTSL  I  TS+ S   H  
Sbjct: 16  LAGSLAGLFGIGGGLVIVPVLIFSFGAQGFSPDIAAHMAVGTSLATIVFTSLSSIRSHHV 75

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
           HG I   I +     +    ++ +   S +    L     +F +++ + ML        R
Sbjct: 76  HGAIRWDIFRAMTIGIVFGALIGAWTASLLSGPALELIIGVFVIVVAVKMLLGFDPKPSR 135

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
             P N      G+V G++S   G+GGG  T   +      +  A   SA     IA    
Sbjct: 136 SVPGNTGLRAAGVVIGWVSAIFGIGGGTLTVPYLSRCNIKMQHAIGISAACGLPIALAGA 195

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           L  +++GWG   LP +SLGF+ + A++ ++  S+L   +   L++ +    L   F++++
Sbjct: 196 LGNLWTGWGDPQLPAYSLGFIYLPALVGVILTSVLFARVGANLAHRLNAPLLRRIFAIML 255


>gi|332306576|ref|YP_004434427.1| hypothetical protein Glaag_2214 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332173905|gb|AEE23159.1| protein of unknown function DUF81 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 274

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 1/226 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   FQ  G+     M++A GTSL  I PTS+ S   HR+ G ++  +LK W  ++ +
Sbjct: 39  PVLFFLFQSFGVSPQSAMYIATGTSLATIIPTSISSIRSHRKKGNVDAALLKQWGALILV 98

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGF 168
             +V S +++ VD  +L   F I   L  + ML R  +       P    + I     GF
Sbjct: 99  GVLVGSWLVTKVDGRYLTTLFGIVATLSALNMLFRTGKSALAESLPGRVGQSIMAACIGF 158

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
            S  +G+GGG  +  ++  +    +KA  T+A +  +I+ PA L  +  G      P  +
Sbjct: 159 FSSMVGIGGGTLSVPILTAFNYPAHKAVGTAAAIGLIISLPAALYLLMFGQTPQDAPLGT 218

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            G++N+   + I+P+++L  P+   ++  +    L   F++++  T
Sbjct: 219 YGYINLVGFVCIVPLTVLCAPIGAGIASKLDANMLKKIFAVVLLIT 264


>gi|83952337|ref|ZP_00961068.1| membrane protein [Roseovarius nubinhibens ISM]
 gi|83836010|gb|EAP75308.1| membrane protein [Roseovarius nubinhibens ISM]
          Length = 274

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 113/223 (50%), Gaps = 1/223 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AFQ +G D    M + + TSL  I  TSV S + H + G ++  IL+ W   + I
Sbjct: 38  PAFYYAFQTLGYDGPQLMQMCLATSLATIIVTSVRSVLSHNKKGAVDWDILRGWAPGIVI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             ++   + S +  + L   F I  + +G+ M L R       + P    + I   + GF
Sbjct: 98  GALIGVWVASGLRSATLTGIFGILGITVGLYMGLGRAHWRLAPEMPQGVTRMILSPILGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  YG  I++A AT+AG   LIA P++L  +         PP++
Sbjct: 158 LSVLMGIGGGSFGVPLMSLYGRPIHRAVATAAGFGILIAVPSVLGFLLLEIDPAHRPPFT 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           LG VN+ A ++++ ++++  P   KL++ +  K L   F++ +
Sbjct: 218 LGAVNLVAFVVVIAMTLITAPWGVKLAHAMDPKPLKRVFAVFL 260


>gi|312963678|ref|ZP_07778159.1| protein of unknown function DUF81 [Pseudomonas fluorescens WH6]
 gi|311282187|gb|EFQ60787.1| protein of unknown function DUF81 [Pseudomonas fluorescens WH6]
          Length = 260

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 120/247 (48%), Gaps = 2/247 (0%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G L+GLFGVGGG+++VPVL  +F + G D  +  H+A+GTSL  I  TS+ +  EH R 
Sbjct: 13  AGVLAGLFGVGGGIIIVPVLVFSFTVQGFDPQVLTHLAVGTSLATIIFTSINAVREHHRR 72

Query: 93  GTINMKILKDWIFV-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
           G +   I   W+ V + I     +L    +    L K   +F L++ + +    +    R
Sbjct: 73  GAVRWPIFV-WMTVGILIGAGFGALTAEAISGPHLQKIIGVFALVVAVQLGLDFKPKASR 131

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
             P      + G V G+ S   G+GGG  T   + +    + +A ATS+     IA  + 
Sbjct: 132 TVPGKVGLTLAGTVIGWASAIFGIGGGSLTVPFLTWRSVPMQQAVATSSACGLPIALASA 191

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           L  +  GW    LP  SLGFV + A+L I   S++      +L++ +  + L   F+ ++
Sbjct: 192 LSFMILGWHDPLLPAHSLGFVYLPALLGIALTSMVFARFGARLAHRLSPRLLKRLFAGLL 251

Query: 272 FTTSFVF 278
           F     F
Sbjct: 252 FCVGINF 258


>gi|219872260|ref|YP_002476635.1| permease [Haemophilus parasuis SH0165]
 gi|219692464|gb|ACL33687.1| permease [Haemophilus parasuis SH0165]
          Length = 265

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 124/249 (49%), Gaps = 6/249 (2%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++C +I+ S ++G L+GLFG+GGG+++VP L      +G+ D + M +A+GTS   I  T
Sbjct: 6   FVCCLILGS-VAGFLAGLFGIGGGMIIVPTLVYLLPQIGVPDDLLMSIALGTSFSTIVLT 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  +   H + G +   ++K ++  L +   ++ L++S + KS + K FA+  L + + M
Sbjct: 65  TFSAAQRHHKLGNVQWSVVKFFVPALMVAVFISGLIVSDLPKSVMTKIFAVMILYLSLKM 124

Query: 142 -LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
            L       E K        I G V G LS   G+ GG F    +   G  + KA  TS+
Sbjct: 125 FLSLKPKQAEPKPLTTQSTLIAGGVIGVLSSFAGIAGGAFIVPFLNSRGIELKKAIGTSS 184

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL----ATKLSY 256
               L+     +  + SGW    LP +++G+V + A++ I   SI  + L    A KL  
Sbjct: 185 FCGGLLGLAGAISFVISGWDNPNLPQYAVGYVYLPALVGITLTSIFTSKLGATAANKLPV 244

Query: 257 MIGKKYLTI 265
            I K+   +
Sbjct: 245 PILKRAFAV 253


>gi|167854629|ref|ZP_02477410.1| hypothetical protein HPS_02594 [Haemophilus parasuis 29755]
 gi|167854384|gb|EDS25617.1| hypothetical protein HPS_02594 [Haemophilus parasuis 29755]
          Length = 264

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 124/249 (49%), Gaps = 6/249 (2%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++C +I+ S ++G L+GLFG+GGG+++VP L      +G+ D + M +A+GTS   I  T
Sbjct: 5   FVCCLILGS-VAGFLAGLFGIGGGMIIVPTLVYLLPQIGVPDDLLMSIALGTSFSTIVLT 63

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  +   H + G +   ++K ++  L +   ++ L++S + KS + K FA+  L + + M
Sbjct: 64  TFSAAQRHHKLGNVQWSVVKFFVPALMVAVFISGLIVSDLPKSVMTKIFAVMILYLSLKM 123

Query: 142 -LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
            L       E K        I G V G LS   G+ GG F    +   G  + KA  TS+
Sbjct: 124 FLSLKPKQAEPKPLTTQSTLIAGGVIGVLSSFAGIAGGAFIVPFLNSRGIELKKAIGTSS 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL----ATKLSY 256
               L+     +  + SGW    LP +++G+V + A++ I   SI  + L    A KL  
Sbjct: 184 FCGGLLGLAGAISFVISGWDNPNLPQYAVGYVYLPALVGITLTSIFTSKLGATAANKLPV 243

Query: 257 MIGKKYLTI 265
            I K+   +
Sbjct: 244 PILKRAFAV 252


>gi|260426351|ref|ZP_05780330.1| membrane protein [Citreicella sp. SE45]
 gi|260420843|gb|EEX14094.1| membrane protein [Citreicella sp. SE45]
          Length = 273

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 1/215 (0%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
           F+ +G      M V + TSL  I  TS+ S   H R G ++ +ILK W   + +  +V  
Sbjct: 44  FETLGYGSPQLMQVCLATSLATIVVTSIRSVAAHNRKGAVDWQILKRWAPGIALGALVGV 103

Query: 116 LMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALG 174
           L +S +D +FL   F    +++G+     R       + P   ++ +     GFLS  +G
Sbjct: 104 LTVSRLDSAFLQALFGCVAIVIGLYFAFGRRSWRLSDRMPGAGLRELIASGIGFLSVLMG 163

Query: 175 VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           +GGG F   LM      +++A AT+AG    IA P++L   +        PP +LG VN+
Sbjct: 164 IGGGSFAVPLMTLCSVPMHRAVATAAGFGLSIALPSVLAFFFVEIPEPVRPPLTLGAVNL 223

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           GA  + + ++++  PL  +L++ + ++ L   F++
Sbjct: 224 GAFAVAISMTLITAPLGARLAHAVEERTLRRTFAV 258



 Score = 36.6 bits (83), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 20/124 (16%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV---IAPTSVMSFM--- 87
           G LS L G+GGG   VP+++          S+ MH A+ T+ G    IA  SV++F    
Sbjct: 156 GFLSVLMGIGGGSFAVPLMTLC--------SVPMHRAVATAAGFGLSIALPSVLAFFFVE 207

Query: 88  --EHRRH----GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             E  R     G +N+      I +  IT  + + +   V++  L + FA+F L++   M
Sbjct: 208 IPEPVRPPLTLGAVNLGAFAVAISMTLITAPLGARLAHAVEERTLRRTFAVFILVVAANM 267

Query: 142 LKRD 145
           L++ 
Sbjct: 268 LRKS 271


>gi|255261618|ref|ZP_05340960.1| membrane protein [Thalassiobium sp. R2A62]
 gi|255103953|gb|EET46627.1| membrane protein [Thalassiobium sp. R2A62]
          Length = 274

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 1/219 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AF ++G +    M + + TSL  I  TS+ S M H + G ++  IL+ W   + +
Sbjct: 38  PAFFYAFSVLGYEGPFLMQMCLATSLATIIVTSIRSVMSHNKKGAVDWGILRTWAPGIVV 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK-RDRLYCERKFPDNYVKYIWGMVTGF 168
              +   + S ++   L   F I  L++G  ML  RD        P   V +      G 
Sbjct: 98  GAAIGVTIASSLESGVLQLIFGILALVIGCYMLAGRDTWRLGEAMPKGPVVWAMSGSAGL 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   +M  +G  I++A AT+AG    IA P+++  ++     +  PP+S
Sbjct: 158 LSVLMGIGGGSFGVPMMTLFGVPIHRAVATAAGFGVTIAVPSVIGFMFLDIPSDQTPPFS 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           +G VN+ A ++I+  +I+  P   KL++ +  K L   F
Sbjct: 218 IGAVNVFAFVLIVSTTIITAPYGAKLAHRMNPKPLKRAF 256


>gi|308051033|ref|YP_003914599.1| hypothetical protein Fbal_3326 [Ferrimonas balearica DSM 9799]
 gi|307633223|gb|ADN77525.1| protein of unknown function DUF81 [Ferrimonas balearica DSM 9799]
          Length = 263

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 105/209 (50%), Gaps = 8/209 (3%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+G LSGLFG+GGGLV+VPVL      MG+   + +H+A+GTSL  I  TS      H +
Sbjct: 14  LAGILSGLFGIGGGLVIVPVLLTVLPWMGVAPEVLIHLAIGTSLATIVVTSSSGIRAHNK 73

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
            G ++ + +K ++  + + +     + + +  + L + F IF LL+   M    +   +R
Sbjct: 74  RGNVDWETVKRFVPWVVLGSFAGGSVAALLPGALLERLFGIFLLLVATQMWFSLKPNPDR 133

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
             P      + G   G +S   G+GG   +   + +    I KA     GVSA +AFP  
Sbjct: 134 SLPKTPGLALAGGTIGTISSMFGIGGATISVPFLRWCSLPITKAV----GVSATLAFPIA 189

Query: 212 LVRIYS----GWGLNGLPPWSLGFVNIGA 236
           L  + S    GWG   LP WSLG+V + A
Sbjct: 190 LSGVISYLINGWGHPQLPEWSLGYVYLPA 218


>gi|149911651|ref|ZP_01900261.1| hypothetical protein PE36_07941 [Moritella sp. PE36]
 gi|149805275|gb|EDM65290.1| hypothetical protein PE36_07941 [Moritella sp. PE36]
          Length = 261

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 124/258 (48%), Gaps = 2/258 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L +V    +G ++GLFGVGGGL++VP L  +F L  +   +   VA+GTSL  I  TS
Sbjct: 3   VVLYLVLGAAAGLIAGLFGVGGGLIIVPALVFSFSLQDLSPLVLTQVAIGTSLATIIFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   HR  G I+  ++K   F + I  V+ S+   ++    L     I+ L++ + M 
Sbjct: 63  MSSIKTHRSKGAIDWSLVKRLTFGIVIGAVLGSIFADYLPGETLQMIIGIYALIVAVQMG 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +   E + P      + G V G +S   G+GGG  T   + +    +  A ATS+  
Sbjct: 123 LNLKPKAEHELPTGAGLSVAGGVIGAISALFGIGGGSLTVPYLSWCRVEMRNAVATSSAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA   +   + +GW    LP +SLG+V + A   I+  S +      KL++ +    
Sbjct: 183 GLPIAVAGMCTYVITGWNNPELPEYSLGYVYLPAFFGIIITSTVFAKQGAKLAHSLPSHI 242

Query: 263 LTIGFSMIMF--TTSFVF 278
           L   F++++    + F+F
Sbjct: 243 LKRYFALLLLGVGSKFIF 260


>gi|71909635|ref|YP_287222.1| hypothetical protein Daro_4025 [Dechloromonas aromatica RCB]
 gi|71849256|gb|AAZ48752.1| Protein of unknown function DUF81 [Dechloromonas aromatica RCB]
          Length = 266

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 111/236 (47%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
            G ++GLFGVGGGL +VP +   F          MH+A+GTS+  I  TS+ S   H  H
Sbjct: 15  GGFVAGLFGVGGGLTLVPFMYMLFVAQSFPPEHVMHLALGTSMATIVFTSLSSMRAHHAH 74

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           G +   I++     L + T   SL+   V    +   F I      + M+   +    R+
Sbjct: 75  GAVRWDIVRHLAPGLVLGTFGGSLVAGQVPTGPMTAIFVIIVYYASLQMMLDFKPKAHRQ 134

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            P     +  G   G +S  +  GGG  +   MLF   +I+ A  TS+ +   IA    +
Sbjct: 135 LPGPLGLFAAGGTIGIVSSMVAAGGGFLSIPFMLFCNVAIHAAVGTSSALGFPIALAGAI 194

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
             I +G    GLP ++LG++ + A + I+ +S+L+ PL  KL++ +  K L   F 
Sbjct: 195 GYIVAGGNDAGLPAYALGYIYLPAFVGIVTMSVLVAPLGAKLAHRLPVKQLKRAFG 250


>gi|89054668|ref|YP_510119.1| hypothetical protein Jann_2177 [Jannaschia sp. CCS1]
 gi|88864217|gb|ABD55094.1| protein of unknown function DUF81 [Jannaschia sp. CCS1]
          Length = 274

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 110/215 (51%), Gaps = 1/215 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AF+ +G      M + + TSL  I  TSV S M H + G ++  IL+ W   + I
Sbjct: 38  PAFFFAFEGLGYSTDGLMQICLATSLATIVVTSVRSVMGHHKKGAVDWDILRAWGPGIAI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
              +  ++ S +    L   F +  L +G+ M L R       + P  +       V GF
Sbjct: 98  GAALGVIVASGLRNEVLMAIFGVLGLGVGLYMALGRSEWRLGDQMPGAFGTIASSPVLGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   +M  +G +I++A AT+AG   +IA PA++  + +G  +   PP++
Sbjct: 158 LSVLMGIGGGSFGVPMMTLFGVAIHRAVATAAGFGVIIAVPAVIGFLLTGSDVANRPPYA 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           +G VNI A + ++ ++++ TP   KL++ +  K L
Sbjct: 218 VGQVNIVAFVAVIAMTLITTPWGVKLAHAMDPKPL 252


>gi|149913942|ref|ZP_01902474.1| GTP-binding protein EngA [Roseobacter sp. AzwK-3b]
 gi|149812226|gb|EDM72057.1| GTP-binding protein EngA [Roseobacter sp. AzwK-3b]
          Length = 274

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 1/210 (0%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           AFQ +G      M + + TSL  I  TS+ S + H + G ++  ILK W   + I  VV 
Sbjct: 43  AFQTLGYAGPQLMQICLATSLATIIVTSLRSVLSHHKKGAVDWDILKTWAPGIAIGAVVG 102

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGAL 173
            L+ + +  + L   F +  +++G+ L L R       + P    + +   V GFLS  +
Sbjct: 103 VLVAASLKSTTLQGVFGVLGIIVGLYLGLGRAHWRLGPQMPSGLTRALMSPVLGFLSVLM 162

Query: 174 GVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           G+GGG F   +M  YG +I++A AT+AG    IA P++   ++        PP + G VN
Sbjct: 163 GIGGGSFGVPIMSLYGVAIHRAVATAAGFGITIAVPSVAAFLFLDIAPENRPPLTFGAVN 222

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYL 263
           + A + ++ ++++ TP   +L++ +  K L
Sbjct: 223 LVAFVTVIAMTLITTPWGVRLAHAMDAKPL 252


>gi|256823626|ref|YP_003147589.1| hypothetical protein Kkor_2412 [Kangiella koreensis DSM 16069]
 gi|256797165|gb|ACV27821.1| protein of unknown function DUF81 [Kangiella koreensis DSM 16069]
          Length = 268

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 127/242 (52%), Gaps = 14/242 (5%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           +GLFG+GGGLV+VP +      + + D   MH+A+ TS+  I   +V S + H R G+++
Sbjct: 22  AGLFGIGGGLVIVPAMVWLLPQIDVPDQHIMHMALATSMATICFIAVSSALAHYRRGSVS 81

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-------KRDRLYC 149
           +++LK  +  + + +++ S +   ++  +L   F  F +LMG+ M+       K +RL+ 
Sbjct: 82  IRLLKLLVPGIMVGSLLGSYLAKLMNTEWLAWIFGFFSILMGLRMMIDKLPVAKGERLHW 141

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
           ++  P         +V G LS  +G+GGG      +LF+   +  +  T+A     +A  
Sbjct: 142 QQATPS-------AVVMGALSSLVGIGGGSLVVPYLLFHKEKLVLSIGTAAACGLPLAVM 194

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           A +  I  GW + GLP + LG+V + A++ I   SI+  P    L++ +  K +   F++
Sbjct: 195 AAVGYILLGWNVQGLPDYHLGYVYLPAMIAIAVGSIVTAPFGAYLAHRLPTKVIKRFFAL 254

Query: 270 IM 271
           ++
Sbjct: 255 LL 256


>gi|114321195|ref|YP_742878.1| hypothetical protein Mlg_2046 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227589|gb|ABI57388.1| protein of unknown function DUF81 [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 273

 Score = 99.0 bits (245), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 123/228 (53%), Gaps = 1/228 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   F L+ +D ++ MH+A+GTSL V+ PTS+ S + H R+GT+++ +L++    L +
Sbjct: 37  PVLFYVFTLLEVDPAVQMHLAVGTSLAVVVPTSLRSAISHHRNGTVDVALLRELWPTLLL 96

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK-RDRLYCERKFPDNYVKYIWGMVTGF 168
             V+  L+ + V  + L   F    LL+ + M +     +   + P  +V+   G   G 
Sbjct: 97  GVVLGILLSARVSGAVLTGVFGFVGLLVALNMARAAPPPHLAERAPGPWVRGAIGGFVGT 156

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+GGG  +  +       ++++  T+A +  +I+ P ++  +++G G+   PP+S
Sbjct: 157 VSTMMGIGGGTLSVPIFQALRFPMHRSVGTAAAIGCIISIPGVIGFLWAGMGVPERPPFS 216

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           +G+V++   L+I P ++L  P   +L+  +    L   F++ +  T+ 
Sbjct: 217 VGYVSLLGFLLIAPTTVLCAPYGVRLAMHLNTVQLRRAFALFLLITAL 264



 Score = 36.2 bits (82), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 20/124 (16%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV---IAPTSVMSFM--- 87
           GT+S + G+GGG + VP+    FQ +       MH ++GT+  +   I+   V+ F+   
Sbjct: 155 GTVSTMMGIGGGTLSVPI----FQAL----RFPMHRSVGTAAAIGCIISIPGVIGFLWAG 206

Query: 88  ---EHRRHGTINMKILKDWIFVLPITTVVTSLMIS---HVDKSFLNKAFAIFCLLMGILM 141
                R   ++    L  ++ + P T +     +    H++   L +AFA+F L+  +LM
Sbjct: 207 MGVPERPPFSVGYVSLLGFLLIAPTTVLCAPYGVRLAMHLNTVQLRRAFALFLLITALLM 266

Query: 142 LKRD 145
           L R 
Sbjct: 267 LHRT 270


>gi|52424462|ref|YP_087599.1| hypothetical protein MS0407 [Mannheimia succiniciproducens MBEL55E]
 gi|52306514|gb|AAU37014.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 266

 Score = 99.0 bits (245), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 12/253 (4%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I  +IV S + G L+G+FG+GGGLV+VP L     ++G+ D   M  A+GTS   I  T
Sbjct: 5   FIITLIVGSIV-GFLAGIFGIGGGLVIVPTLLYLLPMVGVPDEKLMATALGTSFATIIIT 63

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H + G +  + +K     L I T ++ L I  + K   +K FA   + +   M
Sbjct: 64  SLASAYRHNKLGNVVWEAVKYLAPTLVIATFISGLFIGKLPKDISSKLFACLVVYLAAKM 123

Query: 142 L-----KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           +     K+ +   +   P + +  + G++ G  S A G+GGG F    +   G  + K+ 
Sbjct: 124 VLSIRNKKSKTPAKPLTPQSTI--LGGILIGIASSAAGIGGGSFIVPFLNSRGIEMRKSV 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT----PLAT 252
            +S+   A +    +L  +  GW + G+P WSLG++ + AVL I   S   +     +A 
Sbjct: 182 GSSSFCGAFLGLAGMLSFMIGGWSVEGMPDWSLGYIYLPAVLGITLTSFFTSKFGAEMAN 241

Query: 253 KLSYMIGKKYLTI 265
           KL     K+Y  I
Sbjct: 242 KLPVASLKRYFAI 254


>gi|294085721|ref|YP_003552481.1| hypothetical protein SAR116_2154 [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292665296|gb|ADE40397.1| Protein of unknown function DUF81 [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 268

 Score = 99.0 bits (245), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 115/230 (50%), Gaps = 1/230 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++VPVL   + +M +   I MH A+GTSL  I PTS+ S + H R  +I++ IL+ W   
Sbjct: 30  ILVPVLFLIYDVMNVPADIIMHAAVGTSLATIIPTSISSALAHHRRDSIDLGILRRWSPF 89

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-NYVKYIWGMV 165
           + +       +  +++ + L   F    +L+ + M+           P    ++ +    
Sbjct: 90  IVLGAGSGGFLSQYIESATLTLIFGCLAILVAMNMMMPHTPKMGTILPKARPLEKLISSF 149

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            GF S  +G+GGG  +  +M   G  +++A  TSA    +IA P  L  I+SGW +    
Sbjct: 150 IGFFSALMGIGGGTMSIPVMTALGVPVHRAIGTSAAFGFMIALPGALGFIWSGWDVAMRL 209

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           P+S GF+N+   +++  +SI   P+ ++L++ +    L   F++ +  ++
Sbjct: 210 PYSFGFINLPIAILLFSVSIFTAPMGSRLAHALDPVRLKRAFALFLIISA 259


>gi|294669269|ref|ZP_06734348.1| putative membrane protein [Neisseria elongata subsp. glycolytica
           ATCC 29315]
 gi|291308679|gb|EFE49922.1| putative membrane protein [Neisseria elongata subsp. glycolytica
           ATCC 29315]
          Length = 270

 Score = 98.6 bits (244), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           + +  ++    ++G ++G+FGVGGG ++VP++    Q+ G ++     H+A+GTS  V+ 
Sbjct: 5   EMVAAMLAVGAVAGVIAGMFGVGGGTILVPLVLWILQMQGAENFQYAQHIAIGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  S     +   ++M +L+  +  +       +L+  ++    L   F +F  ++ +
Sbjct: 65  FTSFASARAQYKRQAVDMDVLRAMVPGVLCGVAAGALVAQYLPNKGLQVFFTLFIAILAV 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   +   ER+ P     +  G + G LS  +G+GGG  T   + F    +++A  TS
Sbjct: 125 RALLGIKPTPERQLPGRRGLFGMGGLFGLLSSWIGIGGGSLTVPYLTFCNVPVHRAVGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A +   IA    L   ++GW   GLP  S GFV + AV I+   ++L  PL  +LS+ + 
Sbjct: 185 AALGWPIAVAGTLGYAWAGWNQGGLPEGSAGFVYLPAVGILAAATLLSAPLGVRLSHKLP 244

Query: 260 KKYLTIGFSMIMF 272
              L  GF +++ 
Sbjct: 245 ADKLKKGFGILLL 257


>gi|77360412|ref|YP_339987.1| hypothetical protein PSHAa1469 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76875323|emb|CAI86544.1| conserved protein of unknown function [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 276

 Score = 98.6 bits (244), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 1/226 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   FQ  G+     M +A  TSL  I PTS+ S   H + G ++  +LK W   + I
Sbjct: 41  PVLFFLFQSFGVSPESAMLIATATSLATIVPTSISSIRSHNKKGNVDFDLLKRWAAFILI 100

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGF 168
             ++ S +++ VD   L   F    LL  + ML R  +    +K P    + + G   GF
Sbjct: 101 GVLLGSWLVTRVDGKLLTVLFGAIALLSALNMLFRTGKSALYQKLPGTVGQSVMGAFIGF 160

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG  +  L+  Y    +KA  T+A +  +I+ P  L  +  G      P  +
Sbjct: 161 LSSMVGIGGGTISVPLLTLYNYPAHKAVGTAAAIGLIISLPGALTMLILGSTPIDAPAGT 220

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            G VN+     I+P+++L  P+   L+  +    L   F+ ++  T
Sbjct: 221 FGLVNLFGFACIVPLTVLFAPVGASLAAKLDASKLKKIFACVLLIT 266


>gi|16605593|emb|CAC81936.1| hypothetical integral membrane protein [Vibrio salmonicida]
          Length = 279

 Score = 98.6 bits (244), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 1/226 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   FQ  G+     M +A  TSL  I PTS+ S   H + G ++  +LK W   + I
Sbjct: 41  PVLFFLFQSFGVSPESSMLIATATSLATIVPTSISSIRSHNKKGNVDFDLLKRWAAFILI 100

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGF 168
             ++ S +++ VD   L   F    LL  + ML R  +    +K P    + + G   GF
Sbjct: 101 GVLLGSWLVTRVDGKLLTVLFGAIALLSALNMLFRTGKSALYQKLPGKVGQSVMGAFIGF 160

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG  +  L+  Y    +KA  T+A +  +I+ P  L  +  G      P  +
Sbjct: 161 LSSMVGIGGGTISVPLLTLYNYPAHKAVGTAAAIGLIISLPGALTMLILGSTPIDAPAGT 220

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            G VN+     I+P+++L  P+   L+  +    L   F+ ++  T
Sbjct: 221 FGLVNLFGFACIVPLTVLFAPVGASLAAKLDASKLKKIFACVLLIT 266


>gi|126735874|ref|ZP_01751618.1| hypothetical protein RCCS2_01528 [Roseobacter sp. CCS2]
 gi|126714431|gb|EBA11298.1| hypothetical protein RCCS2_01528 [Roseobacter sp. CCS2]
          Length = 275

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 1/229 (0%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VPVL   F  + + + + MH+A+ TSL  I P SV S   H   G ++  + + W   +
Sbjct: 39  VVPVLFFLFGALNVPNDVAMHLAVATSLATIIPISVSSARAHYIRGALDTHLFRSWAPFI 98

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV-KYIWGMVT 166
            +   +  L   +VD + L   F    L++ + M            P + + + + G V 
Sbjct: 99  FVGAALGGLASKYVDGAQLTVIFGAIALIVALTMAAPKGPVIADSVPSSVLPRSLIGSVI 158

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G LS  +G+GGG  +  ++  +   + +A  T+A    +IA PA++  ++SG G+   PP
Sbjct: 159 GLLSALMGIGGGTLSVPILTLFSFPVKRAIGTAAAFGIVIAVPAVIGFVWSGLGVADRPP 218

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           WSLG VN+ A +I++  +I   P+  ++S+ I    L   FS  +F TS
Sbjct: 219 WSLGNVNMPAAVIVVVAAIFTAPIGARMSHAIDPTALRFVFSGFLFVTS 267


>gi|94264877|ref|ZP_01288651.1| Protein of unknown function DUF81 [delta proteobacterium MLMS-1]
 gi|93454647|gb|EAT04915.1| Protein of unknown function DUF81 [delta proteobacterium MLMS-1]
          Length = 265

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 105/210 (50%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VP+L  AF   G+ ++  MH+A+GTSL  I  TS+ SF+ H R G +   +++     
Sbjct: 29  VIVPLLVFAFSWQGLPEAHLMHLALGTSLASIIFTSISSFLAHHRRGAVYWPVVRGVAPG 88

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + + T   S + + +  +FL   FA+F   +   ML   R    R  P        G   
Sbjct: 89  VVLGTFAGSFVAAALSTTFLQVFFALFLYFVCWQMLSGRRPQPGRSLPGAAGLNAVGGGI 148

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G  S  +G+GGG  +   ML+    I++A  TSA +   IA       + +GW    LP 
Sbjct: 149 GIFSSLVGIGGGTLSVPFMLWCNIGIHQAIGTSAAIGFPIAVAGTAGYLINGWQSTALPA 208

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSY 256
           WSLG++ + A+L I+  S+L  PL  +L++
Sbjct: 209 WSLGYLYLPALLGIVAASVLTAPLGVRLAH 238


>gi|254464392|ref|ZP_05077803.1| membrane protein [Rhodobacterales bacterium Y4I]
 gi|206685300|gb|EDZ45782.1| membrane protein [Rhodobacterales bacterium Y4I]
          Length = 284

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 9/219 (4%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AFQ +G      M + + TSL  I  TS+ S M H + G ++  IL+ W   + I
Sbjct: 48  PAFFYAFQTLGYGGDQLMQICLATSLATIIVTSLRSVMSHNKKGAVDWGILRGWGIGIAI 107

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
             VV  L  S +  + L   F    L++G  L L R         P    + +     GF
Sbjct: 108 GAVVGVLAASSLRSTVLQGVFGGLALVIGCYLGLGRSEWRLAEAMPKGAKRMVLSPAVGF 167

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPA----LLVRIYSGWGLNGL 224
           LS  +G+GGG F   LM  +G ++++A AT+AG   +IA P+    LL+ +         
Sbjct: 168 LSVLMGIGGGSFGVPLMTLHGVAVHRAVATAAGFGVIIAVPSVAGFLLLEVDP----ATR 223

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           PP+++G VN+ A  I++ ++++  P   KL++ +  K L
Sbjct: 224 PPFTIGAVNLVAFFIVIAMTLITAPWGVKLAHAMDPKPL 262


>gi|119469832|ref|ZP_01612670.1| hypothetical protein ATW7_02047 [Alteromonadales bacterium TW-7]
 gi|119446815|gb|EAW28087.1| hypothetical protein ATW7_02047 [Alteromonadales bacterium TW-7]
          Length = 274

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  +I     +G L+GLFGVGGG+V+VPVL    Q  G+     M +A  TSL  I PTS
Sbjct: 11  IVALIATGIFAGILAGLFGVGGGIVIVPVLYFLLQGFGVSPESAMMIATATSLATIVPTS 70

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H   G I++ ++K W   + +  VV S +   +  + L   FA   +L+ + ML
Sbjct: 71  ISSIRSHHAKGNIDLALIKYWAPFILVMAVVGSYLAHSIRGNALVLMFACIAILVSLNML 130

Query: 143 KRDRLYC-ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
            R        K P  + + I   + G LS  +G+GGG     ++  +    + A  T+A 
Sbjct: 131 FRAGAPALVSKLPGKFGQGIMASIVGGLSVMIGIGGGTIGVPMLNAFNVRAHVAVGTAAV 190

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              LIA P ++  +  G      P  + G VN+ A L+I+P++IL  P+  K+   + +K
Sbjct: 191 FGLLIALPGVITLLSIGTTPTDAPLGTWGLVNLPAFLLIIPLTILFAPIGVKIGSKLDQK 250

Query: 262 YLTIGFSMIMFTT 274
            L   F++++  T
Sbjct: 251 QLKRAFAVVLMIT 263


>gi|254486433|ref|ZP_05099638.1| membrane protein [Roseobacter sp. GAI101]
 gi|214043302|gb|EEB83940.1| membrane protein [Roseobacter sp. GAI101]
          Length = 273

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 110/223 (49%), Gaps = 2/223 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AFQ +G D    M + + TSL  I  TS+ S   H + G ++  IL+ W   + I
Sbjct: 38  PAFFYAFQTLGYDGPQLMQMCLATSLATIIVTSLRSVHSHNKKGAVDWAILRTWAPGIVI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V+  L+++ +  + L   F    L++G+ M   R      +  P    +       GF
Sbjct: 98  GAVIGMLVVAQLRTNVLQGIFGALALIVGLYMAFGRADWRLGQAMPTGVARAALSPSVGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  +   I++A AT+AG   LIA PA++  +      N  PP++
Sbjct: 158 LSVLMGIGGGSFGVPLMSLFNVVIHRAVATAAGFGVLIAVPAVIGFLMVDAAPNS-PPYT 216

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +G VN+    I++ ++++  PL  KL++ +  K L   F++ +
Sbjct: 217 VGAVNLPTFAIVIAMTLITAPLGVKLAHAMDPKPLKRVFAVFL 259


>gi|288940500|ref|YP_003442740.1| hypothetical protein Alvin_0761 [Allochromatium vinosum DSM 180]
 gi|288895872|gb|ADC61708.1| protein of unknown function DUF81 [Allochromatium vinosum DSM 180]
          Length = 267

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 117/243 (48%), Gaps = 4/243 (1%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAF-QLMGIDDSICMHVAMGTSLGV 77
           V++ +  + + + LSG ++GLFGVGGG +MVP L   F  L G+      H+A+GTSL  
Sbjct: 3   VIELLAYLAIGA-LSGVMAGLFGVGGGAIMVPALMLLFGALGGVGGDWLAHLAVGTSLAT 61

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I  T   S + H RH  +   I+      + I  +  + +   +   +L + FA+F   +
Sbjct: 62  IIGTGAASTLAHHRHRGVRWDIVWPLAPGIVIGALAGAALAGWIPSLWLQRIFAVFLTYV 121

Query: 138 GILMLKRD--RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           GI +L      +      P        G   G LS  +G+GGG  T   +  +G  + +A
Sbjct: 122 GIRLLAAPATSITASHSLPGRVGLTTVGGGIGLLSSLVGIGGGTLTVPFLSRHGLGMRQA 181

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            ATSA     IA    L  +  GWG  GLP +S GFV   AV  +L  S+ I PL  +L+
Sbjct: 182 VATSAACGLPIAVAGALGFMLVGWGRPGLPAFSTGFVYWPAVAAMLAASMPIAPLGARLA 241

Query: 256 YMI 258
           + +
Sbjct: 242 HTL 244


>gi|224370570|ref|YP_002604734.1| hypothetical protein HRM2_34990 [Desulfobacterium autotrophicum
           HRM2]
 gi|223693287|gb|ACN16570.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 265

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 113/227 (49%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L  +     I +   MH+A+GTS+  I  TSV SFM H R G ++  +++     + 
Sbjct: 31  VPMLVASLTWQQIPEQFIMHLALGTSMATIIFTSVSSFMAHHRRGAVHWPVVRQITPGIL 90

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
             T + S + + +  SFL   F +F   + I M+   +    R  P     +  G + G 
Sbjct: 91  TGTFLGSCVAARLSGSFLRGMFVVFLYYVAIQMITSKKPKPSRHIPGKAGMFGVGNIIGG 150

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+GGG  +   M++    +++A  TSA +   IA    L  IY+G    GLP +S
Sbjct: 151 VSSLVGIGGGTLSVPFMMWCNIPVHEAIGTSAAIGFPIAIAGTLGYIYNGIHEVGLPAYS 210

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +G++ + A+  IL  S+L  PL  +L++ +    L   F++++   +
Sbjct: 211 IGYIYLPALAGILSASVLTAPLGVRLAHSLPVPKLKRVFAILLLVVA 257


>gi|315633681|ref|ZP_07888971.1| permease [Aggregatibacter segnis ATCC 33393]
 gi|315477723|gb|EFU68465.1| permease [Aggregatibacter segnis ATCC 33393]
          Length = 265

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 108/218 (49%), Gaps = 6/218 (2%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           CL+  A  ++G L+GLFG+GGG+V+VP++     ++G+ DS+ M  A+GTS   I  T+ 
Sbjct: 8   CLL--AGCVAGFLAGLFGIGGGMVIVPMMVYLLPIVGVPDSLLMSTALGTSFATIVVTAF 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG---IL 140
            S   H + G +    LK +   L I+  ++   IS +     +K FA   + +    IL
Sbjct: 66  SSAQRHHKLGNVVWSTLKYFAPALMISAFISGQYISKLPHDVSSKLFACLVVYLAAKMIL 125

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
            +K   +   +K        I G + G  S   G+GGG F    +      I KA  TSA
Sbjct: 126 SIKPKNIDPNKKI-TPLSSIIGGALIGMASSVAGIGGGGFIVPFLNSRNVDIKKAIGTSA 184

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
               L+    +L  + SGW   G+PP+S+GFV   AVL
Sbjct: 185 FCGMLMGIAGMLSFMVSGWNAQGMPPYSVGFVYFPAVL 222


>gi|114765459|ref|ZP_01444569.1| membrane protein [Pelagibaca bermudensis HTCC2601]
 gi|114542169|gb|EAU45200.1| membrane protein [Roseovarius sp. HTCC2601]
          Length = 273

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 1/215 (0%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
           F+ +G      M + + TSL  I  TS+ S + H + G +   IL+ W   + I  ++  
Sbjct: 44  FETIGYGSPQVMQICLATSLATIIVTSIRSVLSHNKKGAVEWGILRAWAPGIAIGALIGV 103

Query: 116 LMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALG 174
           L  + +   FL   F    + +G+     R         P   ++ +   V GFLS  +G
Sbjct: 104 LTAARLRSDFLQALFGCIAIFIGLYFAFGRRDWRLSGAMPGGGMRALLSPVVGFLSVLMG 163

Query: 175 VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           +GGG F   +M      +++A AT+AG   LIA P++L  ++        PP +LG VN+
Sbjct: 164 IGGGSFGVPMMTLCSVPMHRAVATAAGFGLLIALPSVLAFLFVPVPAEVRPPLTLGSVNL 223

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           GA  I + ++++  PL  KL++ + +K L   F++
Sbjct: 224 GAFFIAISMTLITAPLGAKLAHAVDEKTLRRSFAV 258



 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 20/124 (16%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG---VIAPTSVMSFM--- 87
           G LS L G+GGG   VP+++          S+ MH A+ T+ G   +IA  SV++F+   
Sbjct: 156 GFLSVLMGIGGGSFGVPMMTLC--------SVPMHRAVATAAGFGLLIALPSVLAFLFVP 207

Query: 88  ---EHRRH---GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              E R     G++N+      I +  IT  + + +   VD+  L ++FA+F L++   M
Sbjct: 208 VPAEVRPPLTLGSVNLGAFFIAISMTLITAPLGAKLAHAVDEKTLRRSFAVFILVVAANM 267

Query: 142 LKRD 145
           L++ 
Sbjct: 268 LRKS 271


>gi|84686987|ref|ZP_01014870.1| membrane protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84664961|gb|EAQ11442.1| membrane protein [Rhodobacterales bacterium HTCC2654]
          Length = 271

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 3/215 (1%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AF  +G D    M V + TSL  I  TS+ S   H + G +   IL+ W   + I
Sbjct: 37  PAFYYAFAGLGYDGPELMQVCLATSLSTIIVTSIRSVSSHNKKGAVEWPILRAWAPGIMI 96

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-KRDRLYCERKFPDNYVKYIWGMVTGF 168
             V+  L+ S +    L   F    +L+   ML  +       + P    + I   + GF
Sbjct: 97  GAVIGVLVASGLRTPTLQVIFGTIAILVAFYMLFFKSEWQIADRMPGLVGRSILSPLVGF 156

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   +M  +G +I++A AT+AG   +IA P+++  ++    + G PP++
Sbjct: 157 LSVLMGIGGGSFGVPIMSLHGVAIHRAVATAAGFGLIIAVPSVIAFLFV--DVAGAPPYT 214

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           +G VN+ A L+++ ++ L  PL  KL++ +  K L
Sbjct: 215 IGAVNLPAFLVVIAMTTLTAPLGVKLAHAMDPKPL 249


>gi|254455723|ref|ZP_05069152.1| conserved domain protein [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082725|gb|EDZ60151.1| conserved domain protein [Candidatus Pelagibacter sp. HTCC7211]
          Length = 278

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 143/256 (55%), Gaps = 2/256 (0%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  L  + +++ + ++ +A+ ++G ++GL GVGGG++MVP L  AF ++  D +  MH++
Sbjct: 1   MEILDINEIINLLVVLSIAASVAGFMAGLLGVGGGIIMVPALYYAFTVLDFDIATRMHLS 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL +I PTSV+S   H  +  ++ K++K +   + +  +  + +  ++  S     F
Sbjct: 61  VGTSLAIIIPTSVISSKTHMEYDAVDFKLVKSFGIFIVLGVIGGTFLAVNLKTSTFVLFF 120

Query: 131 AIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
           ++   ++G+  +  R+++    K   + +K I G++ GF+S  LG+GGG      M  +G
Sbjct: 121 SVMAFIVGLFFIFFREKVVENPKKIKDSIKNISGIIVGFISVLLGIGGGSLMVPFMRTFG 180

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGW-GLNGLPPWSLGFVNIGAVLIILPISILIT 248
             I K+  T++ +  LIA    +  I  G    N   P+S+G++N+   ++ +P+++L+ 
Sbjct: 181 YDIRKSIGTASAIGFLIALSGTITMITGGKIAANINTPFSIGYINLLGFIVFVPVTMLMA 240

Query: 249 PLATKLSYMIGKKYLT 264
            +  K  Y + KK L+
Sbjct: 241 RIGAKAVYKLDKKLLS 256


>gi|251791891|ref|YP_003006611.1| hypothetical protein NT05HA_0082 [Aggregatibacter aphrophilus
           NJ8700]
 gi|247533278|gb|ACS96524.1| thymidylate synthase [Aggregatibacter aphrophilus NJ8700]
          Length = 265

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 119/248 (47%), Gaps = 6/248 (2%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           CL+  A   +G L+GLFG+GGG+V+VP++     ++G+ DS+ M  A+GTS   I  T+ 
Sbjct: 8   CLL--AGCAAGFLAGLFGIGGGMVIVPMMVYLLPIVGVPDSLLMSTALGTSFATIVITAF 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG---IL 140
            S   H + G +    LK +   L I+  ++   IS +      K FA   + +    IL
Sbjct: 66  SSAQRHHKLGNVVWSTLKYFAPALMISAFISGQYISKLPPEISGKLFACLVVYLAAKMIL 125

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
            +K   +   +K        I G + G +S   G+GGG F    +      I KA  TSA
Sbjct: 126 SIKPKNIDPNKKI-TPLSSIIGGSLIGMISSVAGIGGGGFIVPFLNSRNVDIKKAIGTSA 184

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
               L+    +L  + SGWG  G+P +S+GFV + AVL I   S   + L   ++  +  
Sbjct: 185 FCGMLMGIAGMLSFMVSGWGTLGMPNYSIGFVYLPAVLGITITSFFTSKLGANMTNRLPV 244

Query: 261 KYLTIGFS 268
             L  GF+
Sbjct: 245 STLKKGFA 252


>gi|94500138|ref|ZP_01306672.1| hypothetical protein RED65_13422 [Oceanobacter sp. RED65]
 gi|94427711|gb|EAT12687.1| hypothetical protein RED65_13422 [Oceanobacter sp. RED65]
          Length = 276

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 139/267 (52%), Gaps = 3/267 (1%)

Query: 9   SLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMH 68
           ++M FLS + ++ +I LII   F +G L+GL GVGGG+V+VPVL   FQ  G+     M 
Sbjct: 2   NIMEFLSSN-LMAFIALIITGIF-AGILAGLLGVGGGIVIVPVLFFLFQGFGVSPDSAML 59

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +A  TSL  I PTS+ S   H + G ++  +LK W F + I  ++ S +++ VD ++L  
Sbjct: 60  IATATSLATIVPTSISSIRSHHQKGNVDFDLLKYWAFFILIGVLLGSWLVTRVDGTWLTA 119

Query: 129 AFAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
            F I   L  + ML R  +    ++ P    +   G   GF S  +G+GGG  +  L+  
Sbjct: 120 LFGIIATLSALNMLFRTGKSALFQQLPGTAGQTTMGTSIGFFSSMVGIGGGTLSVPLLTL 179

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           Y    +KA  T+A +  +I+ P  L  +  G      P  ++G VN+   + I+P+++L 
Sbjct: 180 YNYPAHKAVGTAAAIGLIISLPGALTMMVLGSTPIDAPSGTVGLVNLVGFICIVPLTVLF 239

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTT 274
            P+   ++  +    L   F++++  T
Sbjct: 240 APVGASIAARLDATKLKKVFAIVLLFT 266


>gi|114319194|ref|YP_740877.1| hypothetical protein Mlg_0028 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114225588|gb|ABI55387.1| protein of unknown function DUF81 [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 269

 Score = 95.9 bits (237), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 124/248 (50%), Gaps = 2/248 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I + + A  ++G LSGLFG+GGG+++VPVL   F L  +  S+ MH+A+GTSL  I  T+
Sbjct: 4   ILVYLAAGAVAGLLSGLFGIGGGVIIVPVLLALFALREVPASVIMHMAVGTSLATIVFTA 63

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM- 141
           + S   H R G + + +       + + +V+ +L+   +  + L  AF +F L +G+ + 
Sbjct: 64  ISSVRSHWRRGGVLVPVFLRLAAGMCLGSVLGALIAGQMSGALLKAAFGVFLLALGLQLA 123

Query: 142 -LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
             +  R       P   +    G   G +S  LG+ GG  T  L+   G  + +A  TSA
Sbjct: 124 FGRGPRPGPRPATPSALILAPAGSAIGAVSSLLGIAGGAMTVPLLARLGIPMRQAVGTSA 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA       + +G+G   LP  ++G+V   A L I+ +S+   PL  +L++ + +
Sbjct: 184 ACGLPIALVGAAAFMATGFGHPDLPQRAIGYVYWPAFLGIIAMSLFTAPLGARLAHRLPQ 243

Query: 261 KYLTIGFS 268
             L   F+
Sbjct: 244 HILQRAFA 251


>gi|83592684|ref|YP_426436.1| hypothetical protein Rru_A1348 [Rhodospirillum rubrum ATCC 11170]
 gi|83575598|gb|ABC22149.1| Protein of unknown function DUF81 [Rhodospirillum rubrum ATCC
           11170]
          Length = 276

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 1/227 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   F+L  +     MH+A+GTSL  I PTS+ S   H R G I+  +++ W   L  
Sbjct: 40  PVLFVIFELFDLPLETAMHIAVGTSLLTIIPTSIASMRAHNRRGAIDWSLVRLWGPFLFF 99

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-VKYIWGMVTGF 168
              +  +    +   +L   F I  L + I M    +L      P    ++     V GF
Sbjct: 100 GAALGGIASRFLGGDYLKAIFGILALAVAINMGMPRKLILADALPKRRSLQGAMSAVIGF 159

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
            S  +G+GGG      +  +   +++A  +++    +I+ PA+   I+SGW + G PP+S
Sbjct: 160 FSSLMGIGGGTLAVPTLTAFSFPVHRAVGSASAFGLIISVPAMAGFIWSGWDVAGRPPYS 219

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           LG+VN+ A  +I+P+S+++      L++ +    L   F+  +  T+
Sbjct: 220 LGYVNLVAAGLIVPMSMIMARYGASLAHSLKPDNLKRVFAAFLAITA 266


>gi|332993616|gb|AEF03671.1| hypothetical protein ambt_10745 [Alteromonas sp. SN2]
          Length = 272

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 4/227 (1%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   FQ +G+     M +A  TSL  I PTS+ S   H   G ++  +LK W   + I
Sbjct: 38  PVLFFLFQALGVSAESAMVIATATSLATIVPTSISSIRAHHSKGNVDFALLKAWAVFILI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKYIWGMVTG 167
             +  S +++ +D +FL   F +   L  I ML  K+D L+     P    + I     G
Sbjct: 98  GVLAGSYLVTVLDANFLTLMFGVIATLSAINMLVGKKDALF--NGLPGRVGQSIMAACIG 155

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           F S  +G+GGG  T   + F     ++A  T+A V  +I+ PA +  ++ G      P  
Sbjct: 156 FFSSMVGIGGGTLTVPTLTFCNYPAHRAVGTAAAVGLIISLPAAITLLFVGTTPVDAPFA 215

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           + G+VN+     I+P++++  P+   ++  +    L   F++++  T
Sbjct: 216 TYGYVNLLGFACIVPLTVIFAPIGASIANKLDAGLLKKIFAVVLIIT 262


>gi|317052314|ref|YP_004113430.1| hypothetical protein Selin_2154 [Desulfurispirillum indicum S5]
 gi|316947398|gb|ADU66874.1| protein of unknown function DUF81 [Desulfurispirillum indicum S5]
          Length = 267

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 114/226 (50%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L   F   GI     MH+A+GTSL  I  TS+ SF+ H R G ++  I++  +  + +
Sbjct: 33  PLLVWCFLRQGIQPDHIMHLALGTSLASIIFTSISSFLSHHRRGAVDWTIVRRIVPGILV 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T + +++ S +  +FL   F +F   +   ++   +    R+ P N   +  G   G +
Sbjct: 93  GTFLGTMVASQLSSNFLKGFFCLFLYTIATQIILNKKPKASRQLPGNAGMFATGSTIGAV 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   ML+   + ++A  TSA +   IA    +  I +   + GLP +S+
Sbjct: 153 SSFVGIGGGSLSVPFMLWCNVTAHRAIGTSAAIGLPIAVAGAIGYIVNNLQVTGLPAYSI 212

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           G+V + A+  I+  S+L  PL  +L++ +    L   F++ ++  +
Sbjct: 213 GYVYLPALAGIVCASVLTAPLGARLAHSLPVDRLKRFFAIFLYVVA 258


>gi|261855473|ref|YP_003262756.1| hypothetical protein Hneap_0864 [Halothiobacillus neapolitanus c2]
 gi|261835942|gb|ACX95709.1| protein of unknown function DUF81 [Halothiobacillus neapolitanus
           c2]
          Length = 272

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 115/230 (50%), Gaps = 3/230 (1%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD-WI 104
           +VMVPVL   FQ MG+     M +A GTSL  + PT++ S   H R G +++ I +  WI
Sbjct: 34  IVMVPVLFFIFQAMGVGSLDAMSMATGTSLAGMIPTAISSVRAHHRKGNVDVGIFRTWWI 93

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM 164
           F+L I  +  S++++     +    FA+  L + I M     +  +   P    + I   
Sbjct: 94  FIL-IGVITGSVLVTQFRSRWFVVLFALIALFVAIRMFLHKTVAAQ-ALPRLIWQRISAF 151

Query: 165 VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
           + GFLS   G+GGG     L+  +    ++A  ++A    +IA P  LV +  G      
Sbjct: 152 MLGFLSVMSGLGGGTIGVPLLTRFHVPAHRAVGSAAAFGLVIAIPGALVMLVLGQSPADA 211

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           P  ++G VN+ A+L ++P+SIL  P+  KL   +  + L   F++++  T
Sbjct: 212 PLGTVGLVNLPALLTMVPLSILFAPVGVKLGARLPAQQLKKVFAVVLAIT 261


>gi|83943000|ref|ZP_00955460.1| membrane protein [Sulfitobacter sp. EE-36]
 gi|83846008|gb|EAP83885.1| membrane protein [Sulfitobacter sp. EE-36]
          Length = 273

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 2/221 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AFQ +G D    M + + TSL  I  TS+ S   H + G ++  ILK W   + I
Sbjct: 38  PAFFYAFQALGYDSPQLMQMCLATSLATIIVTSLRSVHSHNKKGAVDWAILKTWAPGIVI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             ++  L+++ +  S L   F    L++G+ M   R      +  P    +       GF
Sbjct: 98  GAIIGMLVVAQLRTSVLQGIFGGLALVVGLYMAFGRAHWRLGQAMPRGAARAALSPSVGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  +   I++A AT+AG   LIA P+++  +      N  PP +
Sbjct: 158 LSVLMGIGGGSFGVPLMSLFNVPIHRAVATAAGFGVLIAVPSVIGFLLVDAAPNS-PPLT 216

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           +G VN+    I++ ++++  PL  +L++ +  K L   F++
Sbjct: 217 VGAVNLPTFAIVIAMTLITAPLGVRLAHAMDPKPLKRVFAV 257


>gi|294788638|ref|ZP_06753880.1| putative membrane protein [Simonsiella muelleri ATCC 29453]
 gi|294483515|gb|EFG31200.1| putative membrane protein [Simonsiella muelleri ATCC 29453]
          Length = 268

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 114/226 (50%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++VP++       G+      H+A+GTS  ++  T++ S     R  +IN +I+K     
Sbjct: 31  IIVPIVLWLLHKQGVVSEYTQHIALGTSFAIMIFTTLSSAWAQHRKKSINWQIVKYLSPA 90

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + I  ++ S +  ++   FL   F IF  L+ I ML + +    R+ P     +  G V 
Sbjct: 91  VIIGGLLGSALSKYLPALFLKIFFVIFLYLIAIQMLLKLKPKPTRQLPQPAGLFGIGNVI 150

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G LS  +G+GGG  +   M +    I+ AT TSA ++  I+   L+  +YSGW + GLP 
Sbjct: 151 GVLSSWVGIGGGSLSVPFMTYCNVPIHLATGTSAALAWTISVAGLMGYVYSGWHIQGLPE 210

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
            +LGFV +  V+ +   +++  PL  K+S+ +    L +   +++F
Sbjct: 211 HTLGFVYLPVVVALSVCTVIFAPLGVKVSHQLSPDKLKMAMGILLF 256


>gi|94266537|ref|ZP_01290224.1| Protein of unknown function DUF81 [delta proteobacterium MLMS-1]
 gi|93452838|gb|EAT03361.1| Protein of unknown function DUF81 [delta proteobacterium MLMS-1]
          Length = 265

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 111/225 (49%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VP+L  AF   G+  +  MH+A+GTSL  I  TS+ SF+ H R G +   +++     
Sbjct: 29  VIVPLLVFAFSWQGLPAAHLMHLALGTSLASIIFTSISSFLAHHRRGAVYWPVVRGVAPG 88

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + + T   S + + +  +FL   FA+F   +   ML   R    R  P        G   
Sbjct: 89  VVLGTFAGSFVAAALSTTFLQVFFALFLYFVCWQMLSGRRPQPGRSLPGAAGLNAAGGGI 148

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G  S  +G+GGG  +   ML+    I++A  TSA +   IA       + +GW    LP 
Sbjct: 149 GIFSSLVGIGGGTLSVPFMLWCNIGIHQAIGTSAAIGFPIAVAGTAGYLINGWQSTALPA 208

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           WSLG++ + A+L I+  S+L  PL  +L++ +    L   F++++
Sbjct: 209 WSLGYLYLPALLGIVAASVLTAPLGVRLAHSLPVASLKKIFALLL 253


>gi|332533365|ref|ZP_08409231.1| hypothetical protein PH505_ao00790 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332037247|gb|EGI73703.1| hypothetical protein PH505_ao00790 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 274

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  +I     +G L+GLFGVGGG+V+VPVL    Q  G+     M +A  TSL  I PTS
Sbjct: 11  IVALIATGVFAGILAGLFGVGGGIVIVPVLYFLLQGFGVSPESAMMIATATSLATIVPTS 70

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H   G I++ ++K W   + +  VV S +   +  + L   FA   +L+ + ML
Sbjct: 71  LSSIRSHHSKGNIDLALIKYWAPFILVMAVVGSYLAHSIRGNALVLMFACIAILVSLNML 130

Query: 143 KRDRLYC-ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
            R       ++ P  + + +   + G LS  +G+GGG     ++  +    + A  T+A 
Sbjct: 131 FRAGAPALVKQLPGKFGQGVMASIVGGLSVMIGIGGGTIGVPMLNAFNVRAHVAVGTAAV 190

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              LIA P ++  +  G      P  + G VN+ A  +I+P++IL  P+  K+   + +K
Sbjct: 191 FGLLIALPGVITLLSIGTTPTDAPLGTWGLVNLPAFFLIIPLTILFAPIGVKIGSKLDQK 250

Query: 262 YLTIGFSMIMFTT 274
            L   F++++  T
Sbjct: 251 QLKRAFAVVLMIT 263


>gi|294013133|ref|YP_003546593.1| putative permease [Sphingobium japonicum UT26S]
 gi|292676463|dbj|BAI97981.1| putative permease [Sphingobium japonicum UT26S]
          Length = 276

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 106/230 (46%), Gaps = 2/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L     L+G       HVA+GTS   I  TS+ S + H + G +  +ILK W   + +
Sbjct: 39  PALFVVLPLLGGTHEAIAHVAIGTSAATIIVTSIRSLLAHAKRGAVEFEILKTWAPWIIL 98

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGI--LMLKRDRLYCERKFPDNYVKYIWGMVTG 167
              V  L+   VD   L   FA+   LM +  L+ K          P    +       G
Sbjct: 99  GDGVGVLLAGRVDGHILTMIFAVGVFLMSLNFLLPKVGGKVISDTMPSGIARVGIAGGLG 158

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
             S  LG+GGG    ++M   G SI++A AT++G+  LIA P+ +     G    GLP  
Sbjct: 159 TFSALLGIGGGTIAIMVMTLCGRSIHRAIATASGIGTLIAIPSAIGFALIGLKEGGLPWG 218

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           SLG+VNI A L I  +S+L  PL   +++ +    L   F + +   +FV
Sbjct: 219 SLGYVNIPATLAIASMSVLTAPLGVAVAHAMPAAPLKKIFGVYLVIIAFV 268


>gi|119774002|ref|YP_926742.1| hypothetical protein Sama_0865 [Shewanella amazonensis SB2B]
 gi|119766502|gb|ABL99072.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
          Length = 255

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 101/206 (49%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP L      +G       HVA+ TSL  I  TS+ S   H   G I+ ++LK     +
Sbjct: 22  IVPALLYLLPGVGFSADYLPHVAIATSLSAIILTSISSARAHHGRGNIDFQLLKILAPAV 81

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            +  +V+  +   +    L +AFAIF +LM + M         +  P+  + +I      
Sbjct: 82  LLGALVSGFVAEQIPAEQLRQAFAIFVILMAVQMAFPFNAAAAKPMPNGGLIFIAVFFVA 141

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            L+G +G+GGG+    LM+++G ++  A   SA    LIA    +  + +GW   G+P +
Sbjct: 142 LLAGLMGIGGGVLLVPLMMYFGVAMRTAVGVSAATGLLIAVSGSVSYVLAGWNTQGMPDF 201

Query: 228 SLGFVNIGAVLIILPISILITPLATK 253
           +LG+V + A+L I+  S+L  PL  K
Sbjct: 202 TLGYVYLPALLGIVSTSMLTAPLGAK 227


>gi|307293764|ref|ZP_07573608.1| protein of unknown function DUF81 [Sphingobium chlorophenolicum
           L-1]
 gi|306879915|gb|EFN11132.1| protein of unknown function DUF81 [Sphingobium chlorophenolicum
           L-1]
          Length = 276

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 105/230 (45%), Gaps = 2/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L     L+G       HVA+GTS   I  TS+ S + H + G +  +ILK W   + +
Sbjct: 39  PALFVVLPLLGGTHEAIAHVAIGTSAATIIVTSIRSLLAHAKRGAVEFEILKTWAPWIIL 98

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGI--LMLKRDRLYCERKFPDNYVKYIWGMVTG 167
              V  L+   VD   L   FA+   LM +  L+ K          P    +       G
Sbjct: 99  GDGVGVLLAGRVDGHILTMIFAVGVFLMSLNFLLPKVGGKVISDTMPSGIARVGIAGGLG 158

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
             S  LG+GGG    ++M   G SI++A AT++G+  LIA P+ +     G    GLP  
Sbjct: 159 TFSALLGIGGGTIAIMVMTLCGRSIHRAIATASGIGTLIAIPSAIGFALIGLKETGLPWG 218

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           SLG+VNI A L I  +SIL  PL    ++ +    L   F + +   +FV
Sbjct: 219 SLGYVNIPATLAIASMSILTAPLGVAAAHSLPAAPLKKFFGVYLVIIAFV 268


>gi|145298901|ref|YP_001141742.1| hypothetical protein ASA_1920 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851673|gb|ABO89994.1| conserved hypothetical membrane protein [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 264

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL  +F+ MG +  I  H+A+GTSL  +  T   S   H+  G ++  +++     + 
Sbjct: 31  VPVLVVSFRAMGFEPDIITHLALGTSLPTMIFTGFSSLRAHQEAGAVDWVMIRRLGVGML 90

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           I   +  +  + +    LN     F   M + M    R   ER  P      I G + G+
Sbjct: 91  IGAWLGGMTANQLSAGTLNVIIGCFAWAMALQMGLNLRPKAERHLPGPVGTGIAGTLIGW 150

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S   G+GGG  T   + +    +  A A SA  S  IA    L  +Y+GWG   LP WS
Sbjct: 151 MSALFGIGGGSLTVPYLCWNSVPMRNAVAASAACSIPIALAGSLSYLYAGWGHADLPEWS 210

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +GF+ + A+L I+  S     +  +L++ +  K L   F+++M
Sbjct: 211 VGFIYLPALLGIVLTSTQFARVGARLAHRLSPKRLKQAFALLM 253


>gi|328951784|ref|YP_004369118.1| protein of unknown function DUF81 [Desulfobacca acetoxidans DSM
           11109]
 gi|328452108|gb|AEB07937.1| protein of unknown function DUF81 [Desulfobacca acetoxidans DSM
           11109]
          Length = 265

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 106/210 (50%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VP+L       G+ +   MH+A+ TS+  I  TSV SF  H R G ++  +++     
Sbjct: 29  VIVPMLVFTLTWQGVPNEYIMHLALATSMASIIFTSVSSFSAHHRRGAVHWLVVRRIALG 88

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + + T + + + S +  ++L   F +F   M   ++   +    R  P     +  G   
Sbjct: 89  IVLGTFLGACLASRLSTAYLKGVFVVFLYYMAYQLIADRKPKPSRTLPGRLGMFAVGNGI 148

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  +G+GGG  +   ML+   ++++A  TSA +   IA    +  I +GW + GLP 
Sbjct: 149 GVVSALVGIGGGTLSVPFMLWCNLTVHEAIGTSAAIGFPIAIAGTIGYIVNGWQVAGLPD 208

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSY 256
           +S G+V + A++ I+  S+L  PL  +L++
Sbjct: 209 YSWGYVYLPALVGIVAASVLTAPLGVRLAH 238


>gi|92114790|ref|YP_574718.1| hypothetical protein Csal_2672 [Chromohalobacter salexigens DSM
           3043]
 gi|91797880|gb|ABE60019.1| protein of unknown function DUF81 [Chromohalobacter salexigens DSM
           3043]
          Length = 270

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 6/232 (2%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVPVL+  F L G      +HVA+GTS+  I PTS+ S   H R G +   +++   F+
Sbjct: 32  IMVPVLTSLFALQGFPHDTLVHVALGTSMAAIVPTSLASLRAHHRRGGVAWPVVR---FI 88

Query: 107 LP---ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG 163
            P   + T + + + SHV  + L   FA F   + + ML   +    R  P  +     G
Sbjct: 89  TPGILLGTFLGTFLASHVPTTGLAVFFACFMAFVSLQMLINLKPAPTRTLPGAWGISGVG 148

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           +  G +S  + +GGG  T   + +   ++ +A  TSA V   IA    L  + +GWG   
Sbjct: 149 LGIGGISALVAIGGGSLTVPFLTWCNVALRRAIGTSAAVGLPIALAGALGYLINGWGEAA 208

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           LP  +LGF+   AV+ +  +S    PL  +L++ +    L   F+ ++   S
Sbjct: 209 LPAGTLGFIYWPAVVSMSIVSFFTAPLGARLAHRLPVAMLKRIFAFVLMALS 260


>gi|310816311|ref|YP_003964275.1| membrane protein [Ketogulonicigenium vulgare Y25]
 gi|308755046|gb|ADO42975.1| membrane protein [Ketogulonicigenium vulgare Y25]
          Length = 275

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 109/223 (48%), Gaps = 1/223 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P     F  +G D    M V + TSL  I  TS+ S M H + G ++  +LK W   + +
Sbjct: 39  PAFFYVFTALGYDGPQIMQVCLATSLATIIFTSIRSVMAHHKKGAVDWDVLKTWAPGIVV 98

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V+  L+ + +    L   F +  +++G+ M   R       + P   V+     V GF
Sbjct: 99  GAVIGVLVAAQLRSVALQAIFGVLGMVIGLYMAFGRPDWRIRDEMPKGPVRAALSSVIGF 158

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   +M  YG  I++A AT++G    IA P+++  +         PP +
Sbjct: 159 LSVLMGIGGGSFGVPVMTLYGVPIHRAVATASGFGLTIALPSVIGFLLVPIDAASRPPLT 218

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +G VN+ A ++++ +++L T    +L++ +  K L   F++ +
Sbjct: 219 VGAVNLPAFIVVIGVTMLTTGYGVRLAHAMNPKPLKRVFAIFL 261


>gi|226946825|ref|YP_002801898.1| hypothetical protein Avin_48190 [Azotobacter vinelandii DJ]
 gi|226721752|gb|ACO80923.1| Conserved hypothetical protein [Azotobacter vinelandii DJ]
          Length = 260

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 118/238 (49%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L+GLFG+GGG+++VPVL  +F   G D ++  H+A+GTSL  I  TS+ S + H R
Sbjct: 12  VAGVLAGLFGIGGGIIIVPVLVFSFTAQGFDPAVLTHLAVGTSLATIVFTSINSVIAHHR 71

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
            G +   +       + +  V+ SL  + +    L K   +F + +G+ M    +    R
Sbjct: 72  RGAVLWPLFVWLTAGILVGAVLGSLTAAAIQGPMLQKIIGVFAIAVGLQMGLDLKPRASR 131

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
             P      + G+V G+ S   G+GGG  T   + +    + +A ATSA     IA  + 
Sbjct: 132 GVPGKSALGLAGVVIGWASAIFGIGGGSLTVPFLTWRSVPMPQAVATSAACGLPIALCSA 191

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           L  +  GW    LP WSLGFV + A+L I   S+        L++ +  + L   F++
Sbjct: 192 LSFMAVGWNETHLPAWSLGFVYLPALLGIAATSMFFARFGANLAHRLPPRLLKRLFAL 249


>gi|262379146|ref|ZP_06072302.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
 gi|262298603|gb|EEY86516.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
          Length = 269

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 121/249 (48%), Gaps = 2/249 (0%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS+ S M H +
Sbjct: 12  IAGFAAGLFGVGGGLIIVPILYIVFTQLNYDPNVLMHMAVGTSLATIIVTSISSVMAHHK 71

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC-- 149
            G +   + K+    L + + + + +   +    L  A  +F + +   M +   +    
Sbjct: 72  RGAVLWAVFKNLAPGLVLGSFLGAGVADLLSGQHLQLAIGLFAIWVAYKMFRGAHVQVNP 131

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
           +R  P   V+ + G   G  S   G+GGG  T   +  +G  + KA ATSA     IA  
Sbjct: 132 DRTLPSAPVQMLAGGGIGIASAIFGIGGGSLTVPYLNRHGVIMQKAVATSAACGLPIAIA 191

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             L  I+ G   N   P ++G+V+I A + I  +S +   L  ++++M+    L   F+ 
Sbjct: 192 GALGFIWFGRQANVEVPNAIGYVHIYAFIGISTMSFITAKLGARVAHMLSPTMLKKCFAG 251

Query: 270 IMFTTSFVF 278
           ++      F
Sbjct: 252 LLSVVGLYF 260


>gi|238022797|ref|ZP_04603223.1| hypothetical protein GCWU000324_02709 [Kingella oralis ATCC 51147]
 gi|237866000|gb|EEP67136.1| hypothetical protein GCWU000324_02709 [Kingella oralis ATCC 51147]
          Length = 263

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 116/219 (52%), Gaps = 2/219 (0%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G  +GLFG+GGG ++VP+L       G+ D+  M +A+GTS   I  TS+ S  +H +
Sbjct: 12  IAGFFAGLFGIGGGTIIVPMLLLLLPQAGVPDAQLMAMALGTSFATIVFTSISSAWQHHK 71

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYC 149
            G +++++ + ++  L  +  V   ++S + K+ L K FA   LL+ I ML   + +   
Sbjct: 72  FGNVDLRVFRFFVPALMASVFVFGYLVSGLPKAKLMKMFAAMMLLLAIKMLIASKQKTAP 131

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
             K     V+ I G+V G LS   G+GGG F    +   G  + +A  TS+    L+A  
Sbjct: 132 LAKPLTARVQIIAGVVIGALSSFAGIGGGAFIVPFLNSRGFEMKRAIGTSSACGVLLAIG 191

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
           A +  + SG     +P +S+GFV + A + I+  S++ +
Sbjct: 192 ATIGFMLSGSRFADMPAYSIGFVYLPAFIGIVCASVVTS 230


>gi|255318628|ref|ZP_05359859.1| hypothetical protein ACIRA0001_0830 [Acinetobacter radioresistens
           SK82]
 gi|255304310|gb|EET83496.1| hypothetical protein ACIRA0001_0830 [Acinetobacter radioresistens
           SK82]
          Length = 270

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 121/249 (48%), Gaps = 2/249 (0%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS+ S M H +
Sbjct: 13  IAGFAAGLFGVGGGLIIVPILYIVFTQLNYDPNVLMHMAVGTSLATIIVTSISSVMAHHK 72

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC-- 149
            G +   + K+    L + + + + +   +    L  A  +F + +   M +   +    
Sbjct: 73  RGAVLWAVFKNLAPGLVLGSFLGAGVADLLSGQHLQLAIGLFAIWVAYKMFRGAHVQVNP 132

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
           +R  P   V+ + G   G  S   G+GGG  T   +  +G  + KA ATSA     IA  
Sbjct: 133 DRTLPSAPVQMLAGGGIGIASAIFGIGGGSLTVPYLNRHGVIMQKAVATSAACGLPIAIA 192

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             L  I+ G   N   P ++G+V+I A + I  +S +   L  ++++M+    L   F+ 
Sbjct: 193 GALGFIWFGRQANVEVPNAIGYVHIYAFIGISTMSFITAKLGARVAHMLSPTMLKKCFAG 252

Query: 270 IMFTTSFVF 278
           ++      F
Sbjct: 253 LLSVVGLYF 261


>gi|83954175|ref|ZP_00962895.1| membrane protein [Sulfitobacter sp. NAS-14.1]
 gi|83841212|gb|EAP80382.1| membrane protein [Sulfitobacter sp. NAS-14.1]
          Length = 273

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 2/223 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AF+ +G D    M + + TSL  I  TS+ S   H + G ++  ILK W   + I
Sbjct: 38  PAFFYAFRALGYDSPQLMQMCLATSLATIIVTSLRSVHSHNKKGAVDWAILKTWAPGIVI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             ++  L+++ +  S L   F    L++G+ M   R      +  P    +       GF
Sbjct: 98  GAIIGMLVVAQLRTSVLQGIFGGLALVVGLYMAFGRAHWRLGQAMPRGAARAALSPSVGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  +   I++A AT+AG   LIA P+++  +      N  PP +
Sbjct: 158 LSVLMGIGGGSFGVPLMSLFNVPIHRAVATAAGFGVLIAVPSVIGFLLVDAAPNS-PPLT 216

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +G VN+    I++ ++++  PL  +L++ +  K L   F++ +
Sbjct: 217 VGAVNLPTFAIVIAMTLITAPLGVRLAHAMDPKPLKRVFAVFL 259


>gi|303325752|ref|ZP_07356195.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
 gi|302863668|gb|EFL86599.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
          Length = 265

 Score = 92.8 bits (229), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 101/222 (45%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L   F   G+       +A+GTSL  I  TS+ S   H   G ++  I ++    + +
Sbjct: 32  PMLVAIFPGQGVPPEYVQQMALGTSLASIMITSISSARAHNARGAVHWDIFRNITPGILV 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T V  L+ +H+   FL   F  F  ++   ML   R    R  P        G V G +
Sbjct: 92  GTFVGGLVATHMPTMFLKIFFICFLFVVSAQMLSNYRPPASRDMPGALGTAGVGGVIGLV 151

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   M F    ++ A  TSA +   IA    L  I  GWG   LP  SL
Sbjct: 152 SSFVGIGGGTLSVPFMSFCNVPLHHAVGTSAAIGFPIAVAGTLGYIIGGWGRPDLPALSL 211

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           GFVN+ A+L +   S L  PL  KLS+ +    L  GF++ +
Sbjct: 212 GFVNLWALLGLAAASYLTAPLGAKLSHALPTAKLKRGFAVFL 253


>gi|114771778|ref|ZP_01449171.1| membrane protein [alpha proteobacterium HTCC2255]
 gi|114547594|gb|EAU50485.1| membrane protein [alpha proteobacterium HTCC2255]
          Length = 274

 Score = 92.4 bits (228), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 1/228 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AF  +G  +   M + + TSL  I  TS+ S + H +   +  +IL+ W   +  
Sbjct: 38  PAFFYAFTSLGYVNEQLMQICVATSLATIVFTSIRSVLSHNKKNMVEWQILRLWSGGIVF 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V+   + + +    L   F +  +L+G+ M   +       + P  +V+ I     GF
Sbjct: 98  GAVIGVFIAAKLHTDTLTIIFGLLGILIGLYMAFSKSDWSLGNQMPVGFVRTIISTFVGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG     LM  +   I+KA AT AG    IAFP+    ++S     GLPP +
Sbjct: 158 LSVLMGIGGGSLAVPLMTLHSIKIHKAVATGAGFGLAIAFPSTFGFLFSNPPSAGLPPMT 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           +G+VN  A +I++ +++L  P+   L++ +    L   F+  + + +F
Sbjct: 218 IGYVNFPAFIIVISMTMLTAPIGANLAHKLNVIVLKRIFAFFLISVAF 265


>gi|146276374|ref|YP_001166533.1| hypothetical protein Rsph17025_0322 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145554615|gb|ABP69228.1| protein of unknown function DUF81 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 272

 Score = 92.0 bits (227), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 3/210 (1%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           AF+ +G      M V + TSL  I  TS+ S   H   G +++ IL+ W   + +  V  
Sbjct: 43  AFEALGHGGPALMRVCLATSLATIIVTSLRSVHAHHGKGAVDLGILRQWGPWIALGAVAG 102

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGAL 173
           +L  S +    L   F    + +G+ M   +       + P    +   G+  GFLS  +
Sbjct: 103 TLAASGLRSGVLQAIFGTVGVAVGLYMAFGKASWRLGERMPRGAARGATGIGMGFLSVLM 162

Query: 174 GVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           G+GGG F   LM  +   I++A AT+AG   +IA P+ L+ + +    +  PPW++G VN
Sbjct: 163 GIGGGTFGVPLMSLFNVPIHRAVATAAGFGVIIALPSALLFLLT--PTDAAPPWTVGSVN 220

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYL 263
           + A  I + +++L  PL  +L++ +  K L
Sbjct: 221 LPAFGITIAMTLLTAPLGVRLAHAMDPKPL 250


>gi|50119044|ref|YP_048211.1| hypothetical protein ECA0083 [Pectobacterium atrosepticum SCRI1043]
 gi|49609570|emb|CAG73003.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
          Length = 247

 Score = 92.0 bits (227), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 104/208 (50%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVPVL+  F   G+D++  +H+A+GTS+  I  T++ S   H +H  +   ++      +
Sbjct: 29  MVPVLTALFAAQGVDNTHLVHLALGTSMAAIVVTAISSLRTHHQHQAVLWPVVVRITPAI 88

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            I T   + + + +    L   F+ F   + + M+   +   +R+ P        G+V G
Sbjct: 89  LIGTFAATWLATMLPTRTLAIFFSCFMAYVSLQMVLNIKPKPQRQLPGTAGVSFAGLVIG 148

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S  + +GGG  T   + +    I +A  TSA V   IA    L  + +GW  NGLP +
Sbjct: 149 SISALVAIGGGSLTVPFLTWCNVRIQQAIGTSAAVGLPIALSGALGYMINGWSANGLPDY 208

Query: 228 SLGFVNIGAVLIILPISILITPLATKLS 255
           S+G+V++ AVL+I  +S    P+  +L+
Sbjct: 209 SVGYVSLPAVLLISAVSFFTAPVGARLA 236


>gi|261823644|ref|YP_003261750.1| hypothetical protein Pecwa_4451 [Pectobacterium wasabiae WPP163]
 gi|261607657|gb|ACX90143.1| protein of unknown function DUF81 [Pectobacterium wasabiae WPP163]
          Length = 268

 Score = 92.0 bits (227), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 106/211 (50%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVPVL+  F   G+D++  +H+A+GTS+  I  T++ S   H +H  +   ++      +
Sbjct: 31  MVPVLTALFAAQGVDNTHLVHLALGTSMAAIVVTAISSLRTHHQHQAVLWPVVMKITPAI 90

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            I T   + + + +    L   F+ F   + + M+   +   +R+ P      + G+V G
Sbjct: 91  LIGTFTATWLATLLPTRTLAIFFSCFMAYVALQMVLNIKPKPQRQLPGTAGVSLAGLVIG 150

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S  + +GGG  T   + +    I +A  TSA V   IA    L  + +GW  NGLP +
Sbjct: 151 SISALVAIGGGSLTVPFLTWCNIRIQQAIGTSAAVGLPIALSGALGYMINGWSANGLPDY 210

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+G+V++ AV +I  +S    P+  +L++ +
Sbjct: 211 SVGYVSLPAVFLISAVSFFTAPVGARLAHRL 241


>gi|126461352|ref|YP_001042466.1| hypothetical protein Rsph17029_0578 [Rhodobacter sphaeroides ATCC
           17029]
 gi|126103016|gb|ABN75694.1| protein of unknown function DUF81 [Rhodobacter sphaeroides ATCC
           17029]
          Length = 272

 Score = 92.0 bits (227), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 3/215 (1%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AF+ MG      M V + TSL  I  TS+ S   H R G ++++IL+ W   + +
Sbjct: 38  PAYLYAFEAMGYGGPSLMRVCLATSLATIIVTSLRSVHAHHRKGAVDLEILRRWGPWIAL 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V  + + S +    L   F    + +G+ M   R         P    +   G   G 
Sbjct: 98  GAVAGTFLASSMKSVVLQGIFGGVGVAVGLYMAFGRTSWRLGESLPQGAARAATGTGVGL 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  +   I++A AT+AG   +IA P+  + +++    +  PP +
Sbjct: 158 LSVLMGIGGGTFGVPLMSLFNVPIHRAVATAAGFGVIIALPSAALFLFT--PTDAAPPLT 215

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           +G VN+ A  I + +++L TPL  KL++ +  K L
Sbjct: 216 VGAVNLPAFGITIAMTLLTTPLGVKLAHAMDPKPL 250


>gi|163746888|ref|ZP_02154245.1| membrane protein [Oceanibulbus indolifex HEL-45]
 gi|161380002|gb|EDQ04414.1| membrane protein [Oceanibulbus indolifex HEL-45]
          Length = 273

 Score = 92.0 bits (227), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 2/215 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    A Q +G D    M + + TSL  I  TS  S   H + G ++  IL+ W   + +
Sbjct: 38  PAFFYALQSLGYDGPQLMQICLATSLATIIVTSARSVHAHNKKGAVDWDILRSWAPGIML 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V+  L++S +    L   F    L++G+ L   R         P    + I   + GF
Sbjct: 98  GAVLGVLLVSQLRTVTLQAIFGGLALIVGLYLGFGRSEWRLGETMPRGIKRAILSPMVGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  +G  I++A AT+AG   LIA P+++  ++     N  PP++
Sbjct: 158 LSVLMGIGGGSFGVPLMTLHGRPIHRAVATAAGFGLLIAVPSVIAFLFVDIDQN-RPPFT 216

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           +G VN+ A   ++ ++++  P   +L++ +  K L
Sbjct: 217 VGAVNLVAFGTVITMTLITAPWGVRLAHAMDPKPL 251


>gi|332560359|ref|ZP_08414681.1| hypothetical protein RSWS8N_14900 [Rhodobacter sphaeroides WS8N]
 gi|332278071|gb|EGJ23386.1| hypothetical protein RSWS8N_14900 [Rhodobacter sphaeroides WS8N]
          Length = 272

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 3/215 (1%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AF+ MG      M V + TSL  I  TS+ S   H R G ++++IL+ W   + +
Sbjct: 38  PAYLYAFEAMGYGGPSLMRVCLATSLATIIVTSLRSVHAHHRKGAVDLEILRRWGLWIAL 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V  + + S +    L   F    + +G+ M   +         P    +   G   G 
Sbjct: 98  GAVAGTFLASSMKSVVLQGIFGGVGVAVGLYMAFGKTSWRLGESLPQGAARAATGTGVGL 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  +   I++A AT+AG   +IA P+  + +++    +  PP +
Sbjct: 158 LSVLMGIGGGTFGVPLMSLFNVPIHRAVATAAGFGVIIALPSAALFLFT--PTDAAPPLT 215

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           +G VN+ A  I + +++L TPL  KL++ +  K L
Sbjct: 216 VGAVNLPAFGITIAMTLLTTPLGVKLAHAMDPKPL 250


>gi|77462474|ref|YP_351978.1| hypothetical protein RSP_1927 [Rhodobacter sphaeroides 2.4.1]
 gi|77386892|gb|ABA78077.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
          Length = 272

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 3/215 (1%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AF+ MG      M V + TSL  I  TS+ S   H R G ++++IL+ W   + +
Sbjct: 38  PAYLYAFEAMGYGGPSLMRVCLATSLATIIVTSLRSVHAHHRKGAVDLEILRRWGLWIAL 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V  + + S +    L   F    + +G+ M   +         P    +   G   G 
Sbjct: 98  GAVAGTFLASSMKSVVLQGIFGGVGVAVGLYMAFGKTSWRLGESLPQGAARAATGTGVGL 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  +   I++A AT+AG   +IA P+  + +++    +  PP +
Sbjct: 158 LSVLMGIGGGTFGVPLMSLFNVPIHRAVATAAGFGVIIALPSAALFLFT--PTDAAPPLT 215

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           +G VN+ A  I + +++L TPL  KL++ +  K L
Sbjct: 216 VGAVNLPAFGITIAMTLLTTPLGVKLAHAMDPKPL 250


>gi|260575167|ref|ZP_05843168.1| protein of unknown function DUF81 [Rhodobacter sp. SW2]
 gi|259022789|gb|EEW26084.1| protein of unknown function DUF81 [Rhodobacter sp. SW2]
          Length = 272

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 3/215 (1%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
           F+ +G      M V + TSL  I  TSV S + H R G ++  IL+ W   +    V+  
Sbjct: 44  FEQLGYGSPQLMQVCLATSLATIIVTSVRSVLAHNRKGAVDWAILRAWGPWIAAGAVLGM 103

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALG 174
            + S +  + L   F +  L+ G+ M   R       + P    +   G   GF S  +G
Sbjct: 104 ALASQLRSTTLQIIFGVLALIAGLYMAFGRADWRLGPQMPGGVTRTGLGGALGFFSVLMG 163

Query: 175 VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           +GGG F   LM  Y   I++A AT+AG   +IA P++L  +     +   PP+++G VN+
Sbjct: 164 IGGGTFGVPLMSLYSLPIHRAVATAAGFGLIIALPSVLGFLLLDIAVK--PPFTVGAVNL 221

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            A  +I+ ++++ TPL  +L++ +  + L   F++
Sbjct: 222 PAFAVIIAMTLITTPLGVRLAHAMDPRPLKRAFAV 256


>gi|326793477|ref|YP_004311297.1| hypothetical protein Marme_0157 [Marinomonas mediterranea MMB-1]
 gi|326544241|gb|ADZ89461.1| protein of unknown function DUF81 [Marinomonas mediterranea MMB-1]
          Length = 272

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 4/227 (1%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   +Q +G+     M VA  TSL  I PTS+ S   H+  G ++  +LK   F + I
Sbjct: 38  PVLFFLYQGLGVSADSAMLVATATSLATIIPTSISSIRSHKAKGNVDFDLLKQLGFFVFI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKYIWGMVTG 167
             +V S +++ V+  +L   F +   L  I ML  +++ L+     P    + I G   G
Sbjct: 98  GVLVGSYVVTQVEGEWLTLLFGVIATLSAINMLVGRKEALFSS--LPGKLGRGIIGYCIG 155

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           F S  +G+GGG  T   + F     +KA  T+A V  +I+ PA +  +  G   +  P  
Sbjct: 156 FFSSMVGIGGGTLTVPTLTFCNYPAHKAVGTAAAVGLIISLPAAVTMLIFGQSPSDAPFG 215

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           ++G VN+     I+P+++L  P+   ++  +    L   F++++  T
Sbjct: 216 TVGLVNLIGFAFIVPLTVLFAPVGAGIANKLDAAKLKKVFAVVLIIT 262


>gi|146329858|ref|YP_001209006.1| hypothetical protein DNO_0075 [Dichelobacter nodosus VCS1703A]
 gi|146233328|gb|ABQ14306.1| conserved hypothetical membrane protein [Dichelobacter nodosus
           VCS1703A]
          Length = 265

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 120/248 (48%), Gaps = 1/248 (0%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIAPTSV 83
           ++I A  ++G L+GLFG+GGG+++VP +        I       H+A+G+S  V+  TS 
Sbjct: 3   MMICAGAVAGLLAGLFGIGGGMILVPAILTIMNSQNIPSHGYAQHLAIGSSFAVMMFTSF 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S     R  ++  +        L +  +V +++  +V    L   F IF   + +  L 
Sbjct: 63  SSTYAQYRKKSVAWQAFFALAPALVLGAIVGAVVAQYVPNFALQIIFVIFATTVAVRSLL 122

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
                   + P N++ +  G   G LS  +G+GGG      +++    I++A  TS+ + 
Sbjct: 123 NITPKATHQLPKNHILWAIGTFFGILSSLVGIGGGSLVVPFLVYCNIDIHRAVGTSSALG 182

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            +IA    +   +SG+ +  LPP SLGF+ +  V I+   +++  P+  +LS+ +    L
Sbjct: 183 WIIAITGAVGYAFSGFSVPDLPPHSLGFIYLPVVPILALTTVIFAPIGVRLSHRLSSPAL 242

Query: 264 TIGFSMIM 271
             GF +++
Sbjct: 243 KKGFGILL 250


>gi|332991674|gb|AEF01729.1| membrane protein [Alteromonas sp. SN2]
          Length = 273

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 114/246 (46%), Gaps = 4/246 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++  + +   ++G  +GLFG GGG V+VP L   F          + VA+GTSL  I  +
Sbjct: 8   FVVTLCITGAIAGITAGLFGNGGGFVVVPALLAVFPFFTPPSQELVKVAIGTSLASIVVS 67

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  S M H + G ++  ILK W   + +  +    + S      L   FA   LL  I  
Sbjct: 68  STRSVMAHHKKGAVDFDILKSWSIWIVLGVIGGIYIASSTSSDGLTVVFAAGVLLYSIYF 127

Query: 142 LKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           L  +   R       P+   K +   V G  S  LG+GGG    + M+    +I +A AT
Sbjct: 128 LFPEFVIRPGVALSMPEGVAKSVLAFVLGGFSALLGIGGGTPMVITMVICQRTIQQAVAT 187

Query: 199 SAGVSALIAFPALLVRIYSGWGLNG-LPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +AGV  LI  P  +  ++        LP  ++G++NI A++ I   +I+  P+  K+++ 
Sbjct: 188 AAGVGFLIGLPGAIGFLFMKHPETAILPVGTIGYINIPALVAISIGAIITAPMGAKMAHN 247

Query: 258 IGKKYL 263
             +K L
Sbjct: 248 FSEKKL 253


>gi|320354019|ref|YP_004195358.1| hypothetical protein Despr_1919 [Desulfobulbus propionicus DSM
           2032]
 gi|320122521|gb|ADW18067.1| protein of unknown function DUF81 [Desulfobulbus propionicus DSM
           2032]
          Length = 267

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 110/229 (48%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VP+L   F   G+     MH+A+GTSL  I  TS+ SFM H R G +   I++  +  
Sbjct: 30  VIVPMLVFCFAKQGVQPDQIMHLALGTSLASIIFTSISSFMSHHRRGAVEWTIVRRIVPG 89

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + I T + + + + +   FL   F +F   +   ML   +    R+ P     +  G   
Sbjct: 90  ILIGTFLGTFIAARLSTGFLKTFFCVFLYCVATQMLLNKKPKASRELPQTAGMFGVGSTI 149

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  +G+GGG  +   M++     + A  TSA +   IA       + +    +GLP 
Sbjct: 150 GVVSALVGIGGGSLSVPFMIWCNVPAHLAVGTSAAIGFPIAIAGAFGFMVNNLHGSGLPA 209

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +SLG+V + A++ I+  SI   PL  KL++ +    L   F++ ++  +
Sbjct: 210 YSLGYVYLPALIGIVCTSIFTAPLGAKLAHALPVDKLKRLFALFLYAVA 258


>gi|88803086|ref|ZP_01118612.1| hypothetical protein PI23P_10877 [Polaribacter irgensii 23-P]
 gi|88780652|gb|EAR11831.1| hypothetical protein PI23P_10877 [Polaribacter irgensii 23-P]
          Length = 281

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 9/259 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           YI   + A  +SG L+GLFG+GGG+++VPVL   F+  G+ ++   HV +GTSL  I  T
Sbjct: 4   YILYYLAAGAISGVLAGLFGIGGGMIIVPVLIYIFKAQGVPEAALTHVGIGTSLTTIIVT 63

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H R G +N  + K     L I +++ + + S +  + L     I   L+G+ M
Sbjct: 64  SISSLRAHDRKGAVNWNVWKRMAPGLVIGSLMGAGVASVIQGNSLQAIIGIGAFLVGLKM 123

Query: 142 LKRDRLYCER----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           L       E     K P    +   G   G +S   G+GGG  T  ++ +YG  I  A  
Sbjct: 124 LFMKNKSLEENNLSKLPSPMGQTSLGGFIGIVSAIFGIGGGTLTVPILSYYGLKIQHAVG 183

Query: 198 TSAGVSALIAFPALLVRIYSGWGL-----NGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           TSA     IA          G  L     + LP    GFV++ A + +   S     +  
Sbjct: 184 TSAACGLPIAASGAFGFFVFGQFLDPSVKDALPNGVFGFVHMYAFICVSFASFFTARIGA 243

Query: 253 KLSYMIGKKYLTIGFSMIM 271
           +L++ +    L   F++++
Sbjct: 244 RLAHKLPAAALKKAFAVLL 262


>gi|188583433|ref|YP_001926878.1| hypothetical protein Mpop_4234 [Methylobacterium populi BJ001]
 gi|179346931|gb|ACB82343.1| protein of unknown function DUF81 [Methylobacterium populi BJ001]
          Length = 270

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 118/235 (50%), Gaps = 1/235 (0%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D +V  I +  +   +SG LSGLFG+GG  V +P+    F  +GI+ SI MHVA  TS+ 
Sbjct: 2   DDLVLRIIIFAIVGLVSGFLSGLFGIGGSTVRLPIFIYLFPWVGIEHSILMHVASATSMA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           ++ P+++ +  E    G ++    K W+  L I     ++++ +     L   FA++ LL
Sbjct: 62  LVIPSAITASREQYALGNLDFGFYKTWVVGLFIGVAFGAILLPYSSTEILQSLFAVYILL 121

Query: 137 MGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +G+ + + R R     + P    +   G   G ++   G  GG  T  L+   G ++ KA
Sbjct: 122 VGLYIAVGRGRALSAGQPPSGIKRIGLGSFVGLVAAMTGTSGGTLTTPLLNTCGLALEKA 181

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            A ++    +    A +  I +GW    LP +SLG+V++   ++++P  ++  PL
Sbjct: 182 IAIASATGLVTGSIATIGGIITGWNARDLPSYSLGYVDVVIFIVMMPTVMISAPL 236


>gi|254786609|ref|YP_003074038.1| membrane protein [Teredinibacter turnerae T7901]
 gi|237686268|gb|ACR13532.1| membrane protein [Teredinibacter turnerae T7901]
          Length = 278

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 139/263 (52%), Gaps = 6/263 (2%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           + +++Y  +   +  ++G ++GLFGVGGG+V+VP L   F  +G++ S  + +A+ TSLG
Sbjct: 2   NELLEYSFVCACSGIVAGFVAGLFGVGGGIVIVPALYFVFGALGMEASHALAMAVATSLG 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I PTS+ S   H R G I+ ++++  +  L +     +L++S     +L+  F    L+
Sbjct: 62  TILPTSISSLRAHNRLGNIDWQVVRLAVPSLVLGACAGALLVSFFAGEWLSLVFGCTLLV 121

Query: 137 MGILMLKRDRLYCE----RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           +  L+L++ R   +     K P   ++ +       +S   GVGGG   + L++  G S+
Sbjct: 122 VAWLVLRKGRGATDAVGSAKLPPVVLR-VAVFFLAVISALAGVGGGALGSPLLVMGGYSV 180

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           ++A  T+A   A IA P++++         G PP+S+G +++ A  +I   + L+ P   
Sbjct: 181 HRAVGTAASFGAFIALPSIILIALFSVSPEGAPPYSIGLISLPAWALISVCTYLVAPFGA 240

Query: 253 KLSYMIGKKYL-TIGFSMIMFTT 274
           K    +  ++L T+  + +MF +
Sbjct: 241 KFGRQLSDRHLATVLAAFLMFIS 263


>gi|258404296|ref|YP_003197038.1| hypothetical protein Dret_0158 [Desulfohalobium retbaense DSM 5692]
 gi|257796523|gb|ACV67460.1| protein of unknown function DUF81 [Desulfohalobium retbaense DSM
           5692]
          Length = 265

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 104/207 (50%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L+  F   G+ D+  +H+A+GTSL  I  TS+ S   H +HG +   +       +  
Sbjct: 32  PMLTFMFTAQGLPDAYILHLALGTSLATILFTSISSLRAHNQHGAVKWPVFWRIAPGIIF 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T + S + + +   FL   FA F   +GI ML+  +    R+ P     +  G   G  
Sbjct: 92  GTFLGSWIAAQLSTDFLKGFFACFLFYVGIRMLRGSKPKPSRQLPGTLGIFGAGSGIGVF 151

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   +++   +++KA  T+A +   IA    L  + +G G   LP + L
Sbjct: 152 SSLVGIGGGTLSVPFLVWCNVTMHKAIGTAAAIGFPIAVAGSLGYLVNGLGTEVLPWYCL 211

Query: 230 GFVNIGAVLIILPISILITPLATKLSY 256
           GF++I A+L I+  S+L  P+  +L++
Sbjct: 212 GFIHIPALLGIILASVLTAPVGARLAH 238


>gi|289207575|ref|YP_003459641.1| hypothetical protein TK90_0390 [Thioalkalivibrio sp. K90mix]
 gi|288943206|gb|ADC70905.1| protein of unknown function DUF81 [Thioalkalivibrio sp. K90mix]
          Length = 268

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 3/208 (1%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  +G+FG+GGGL++VPV    F L+  D +  + +A+G+SLG I PT+++S   H R 
Sbjct: 19  AGIPAGMFGIGGGLILVPVFVAIFSLLAFDAASLVQLAVGSSLGAIIPTAILSARAHHRR 78

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           G ++   ++  +  +    ++ + + + +D   L + F  F + +GI ML   +   +  
Sbjct: 79  GGVDGTAVRRLLPGIIFGALLGAWLATRIDSDHLGRIFGAFEVAIGIWMLLNVQ-PPKAP 137

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            P   V    G V G +S  +G+GGG  T   ++  G  + +A  ++A +   IA  A L
Sbjct: 138 VPRRSVWLGGGTVIGAVSSLIGIGGGTLTTPFLVSQGLELRRAIGSAAALGVPIAIGASL 197

Query: 213 VRIYSGWGLNG--LPPWSLGFVNIGAVL 238
           V     W       P W+LG++ + A+L
Sbjct: 198 VFALPQWTDPAYQAPEWALGYLYLPAIL 225


>gi|242278938|ref|YP_002991067.1| hypothetical protein Desal_1466 [Desulfovibrio salexigens DSM 2638]
 gi|242121832|gb|ACS79528.1| protein of unknown function DUF81 [Desulfovibrio salexigens DSM
           2638]
          Length = 265

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 104/210 (49%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VP+L      +GI +   MH+A+GTSL  I  TS+ S   H + G +   I K     
Sbjct: 29  VIVPILVFTLPPLGIPEVHLMHIALGTSLASIIFTSISSMRSHNKRGAVRWDIFKTITPG 88

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + + T + SL  S ++ +FL   F +F   +   ML   +    R+ P     ++ G V 
Sbjct: 89  IILGTFLGSLSTSFMNTNFLKGIFVVFLYYVASQMLFGLKPKASRQVPGFQGLFVAGNVI 148

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G  S  +G+GGG  +   +      I+ A  T+A +   IA       +++G G+ GLPP
Sbjct: 149 GIFSSLVGIGGGTLSVPFLTMCNIVIHTAIGTAAAIGLPIAIAGTAGYVWTGIGVEGLPP 208

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSY 256
           +  G+V + A++ I+  S+L  P+  +L++
Sbjct: 209 YCFGYVYLPALIGIVSASMLTAPIGVRLAH 238


>gi|317052563|ref|YP_004113679.1| hypothetical protein Selin_2408 [Desulfurispirillum indicum S5]
 gi|316947647|gb|ADU67123.1| protein of unknown function DUF81 [Desulfurispirillum indicum S5]
          Length = 268

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 114/240 (47%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G ++G  GVGGG+++VP L   F   G+D ++ + +A+ TSL  I  TS+ + +   + 
Sbjct: 16  AGIIAGTLGVGGGVIIVPSLLYLFARQGMDPALAIKLAVATSLSTIIVTSISAILAQMKR 75

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           G I  ++++ W   + +   ++  + S +    L      F    GI ML+R      R+
Sbjct: 76  GAILWQVVRRWTPYILLGAFLSGTVASLLPAFALQAFIGCFLTYAGINMLRRWTPNPRRQ 135

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            P        G   G +SG  G+ GG     L++     +  A ATS  ++  IA    +
Sbjct: 136 LPGGVGTAGAGTFVGLVSGMAGIAGGNVIIPLLVASNVPMQNAVATSITLALPIATAGTI 195

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             +Y+GW   GLP WSLG+V + A+L I   + L  P    LS+ +    L   F +++ 
Sbjct: 196 GFVYAGWHSLGLPAWSLGYVYLPALLGIATFTFLSVPFGVALSHRLPAPRLKRIFGLLVL 255


>gi|254460986|ref|ZP_05074402.1| membrane protein [Rhodobacterales bacterium HTCC2083]
 gi|206677575|gb|EDZ42062.1| membrane protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 274

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 107/223 (47%), Gaps = 1/223 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P     F  +G D    M + +GTSL  I  TSV S + H + G +   IL+ W   + I
Sbjct: 38  PAFFYVFGALGYDGPQLMQMCLGTSLATIIVTSVRSVLSHNKKGAVGWDILRTWAPGIVI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
              +  ++ + +    L   F +   ++G+ M   R         P    + I   + GF
Sbjct: 98  GAGLGVMVAASMRSGALQMIFGVLAFIVGLYMTFGRSSWRVSEDMPTGVKRMISSPILGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+GGG F    M  +G +I++A AT+AG   LIA PA++  ++        PP++
Sbjct: 158 MSVLMGIGGGSFGVPFMSLHGVAIHRAVATAAGFGVLIAVPAVIGFLFVPIDPAMRPPFT 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +G VN+ A ++++ +++L  P   KL++ +    L   F + +
Sbjct: 218 VGAVNLIAFVVVIAMTLLTAPWGVKLAHAMDAGPLKKAFGVFL 260


>gi|88704402|ref|ZP_01102116.1| membrane protein [Congregibacter litoralis KT71]
 gi|88701453|gb|EAQ98558.1| membrane protein [Congregibacter litoralis KT71]
          Length = 267

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 117/245 (47%), Gaps = 3/245 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I L+  A  ++G  +GLFGVGGG V+VP L   F  +       M VA+GTSL  I  +
Sbjct: 4   FIVLLSGAGMIAGLTAGLFGVGGGFVVVPALLAVFPFLTDQTDNLMMVAVGTSLATIVVS 63

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  +   H +   ++  +LKDW   + +  +    + S  D   L   FA+  L+  I  
Sbjct: 64  SARAVHAHNKRDAVDFALLKDWAVWVLMGVLAGLWIASMADSERLIMVFAVGVLIYSIYF 123

Query: 142 L---KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           L     DR       P    K       G  S  LG+GGG  T L M+     I++A AT
Sbjct: 124 LFPSMFDRFKGRWAMPTGAGKAALASGLGGFSALLGIGGGTITVLTMVICNRPIHQAVAT 183

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           ++GV  LI  P +L  +  G G + LP  SLG+VN+ A+  I   S+L  PL  KL++ +
Sbjct: 184 ASGVGFLIGLPGMLGFVVMGLGADNLPIGSLGYVNMPALAAIAFFSVLTAPLGAKLAHSL 243

Query: 259 GKKYL 263
               L
Sbjct: 244 DANQL 248


>gi|254436865|ref|ZP_05050359.1| conserved domain protein, putative [Octadecabacter antarcticus 307]
 gi|198252311|gb|EDY76625.1| conserved domain protein, putative [Octadecabacter antarcticus 307]
          Length = 272

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 3/215 (1%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AF  +G D    M + +GTSL  I  TS+ S   H + G +   IL+ W   + I
Sbjct: 38  PAFFYAFGALGYDSPQLMQICLGTSLATIIVTSLRSLNSHNKKGAVEWGILRGWGVGIVI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V+   + + +  S L   F    + +G+ M   R         P    + I   +TGF
Sbjct: 98  GAVIGVAVATQLRSSVLQVLFGGIGMCIGLYMTFGRSEWRLGDGMPKGLFRAIGSSLTGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +GVGGG F    M  +G  I++A AT++G   +IA PA++  +++   +   PP +
Sbjct: 158 LSVLMGVGGGSFGVPTMTLFGVPIHRAVATASGYGVIIAIPAVIGFLFTDIAVA--PPLT 215

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           +G VN  A  +++ ++++  P    L++ +  K L
Sbjct: 216 VGAVNFAAFGVVVAMTLITAPWGAALAHRMDPKPL 250


>gi|254453788|ref|ZP_05067225.1| membrane protein [Octadecabacter antarcticus 238]
 gi|198268194|gb|EDY92464.1| membrane protein [Octadecabacter antarcticus 238]
          Length = 282

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 3/215 (1%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AF  +G D    M + +GTSL  I  TS+ S   H +   +   IL+ W   + I
Sbjct: 48  PAFFYAFSALGYDSPQLMQICLGTSLATIIVTSLRSLNSHHKKNAVEWDILRGWGLGIVI 107

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             ++   + + +    L   F    + +G+ M L R         P   ++ +   +TGF
Sbjct: 108 GALIGVAVATQLRSVVLQALFGGLGMCIGLYMTLGRSDWRLGDAMPTGVLRAVLSPLTGF 167

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F    M  YG  I++A AT++G   +IA PA++  +++   +   PP +
Sbjct: 168 LSVLMGIGGGSFGVPTMTLYGVPIHRAVATASGYGVIIALPAVIGFLFADIAVA--PPLT 225

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           +G VN GA  +++ ++++  P    L++ +  K L
Sbjct: 226 VGAVNFGAFGVVVAMTLITAPWGAALAHRLDPKPL 260


>gi|221638337|ref|YP_002524599.1| hypothetical protein RSKD131_0238 [Rhodobacter sphaeroides KD131]
 gi|221159118|gb|ACM00098.1| Hypothetical Protein RSKD131_0238 [Rhodobacter sphaeroides KD131]
          Length = 272

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 3/215 (1%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AF+ MG      M V + TSL  I  TS+ S   H R G ++++IL+ W   + +
Sbjct: 38  PAYLYAFEAMGYGGPSLMRVCLATSLATIIVTSLRSVHAHHRKGAVDLEILRRWGPWIAL 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V  + + S +    L   F    + +G+ M   +         P    +   G   G 
Sbjct: 98  GAVAGTFLASSMKSVVLQGIFGGVGVAVGLYMAFGKTSWRLGESLPQGAARAATGTGVGL 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  +   I++A AT+AG   +IA P+  + +++    +  PP +
Sbjct: 158 LSVLMGIGGGTFGVPLMSLFNVPIHRAVATAAGFGVIIALPSAALFLFT--PTDAAPPLA 215

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           +G VN+ A  I + +++L TPL  KL++ +  K L
Sbjct: 216 VGAVNLPAFGITIAMTLLTTPLGVKLAHAMDPKPL 250


>gi|317154193|ref|YP_004122241.1| hypothetical protein Daes_2492 [Desulfovibrio aespoeensis Aspo-2]
 gi|316944444|gb|ADU63495.1| protein of unknown function DUF81 [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 266

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VP+L+ AF+L    +    H+A+GTS+  I  TS+ S   H R G IN          
Sbjct: 29  VIVPMLNIAFELQNFPEMHIQHIALGTSMATIIFTSLSSMYAHHRRGAINYPAFWRLAPG 88

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + I T + +++ S +   FL   F  F   + I ML   +    R+ P        G   
Sbjct: 89  IVIGTYLGAMLASALPTGFLKAFFGFFLYYVAIQMLLNIKPKPHRELPGVVGTSAAGTGI 148

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G  S  +G+GGG  T   + +   +++   AT+A V   IA       +  GW ++G+P 
Sbjct: 149 GIFSALVGIGGGTLTVPFLSWCNQTMHVCIATAAAVGLPIALAGTTGYVIGGWNVDGIPG 208

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSY 256
             +G+V I A L I+ +S+L  PL  KL++
Sbjct: 209 PHIGYVYIPAFLGIIAMSVLTAPLGAKLAH 238


>gi|254514443|ref|ZP_05126504.1| membrane protein [gamma proteobacterium NOR5-3]
 gi|219676686|gb|EED33051.1| membrane protein [gamma proteobacterium NOR5-3]
          Length = 272

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 127/258 (49%), Gaps = 5/258 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++ L+  A  ++G  +GLFGVGGG V+VP L   F  +G      M VA+GTSL  I  +
Sbjct: 9   FLALMSGAGMIAGITAGLFGVGGGFVVVPALLAVFPFLGDQSEDLMLVAVGTSLATIVVS 68

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS-FLNKAFAIFCLLMGIL 140
           S  S   H + G ++ ++L+DW   + I  V   + ++ V  S  L   FAI  L+  I 
Sbjct: 69  SARSVHAHSKRGAVDFQLLRDWALWV-ILGVGAGIWVASVSNSQRLILVFAIGVLIYSIY 127

Query: 141 ML-KR--DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            L  R  DR +     P    K +     G  S  LG+GGG    L M+     I++A A
Sbjct: 128 FLFPRIFDRYHGRFSLPTGPGKALLASGLGGFSALLGIGGGTVMVLAMVLCNRPIHQAVA 187

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T++GV  LI  P ++  +  G G   LP  S+G++NI A+L I   SI   P+  +L++ 
Sbjct: 188 TASGVGFLIGVPGMIGFMVMGLGAENLPVGSIGYINIPALLAIAVFSIFTAPIGARLAHS 247

Query: 258 IGKKYLTIGFSMIMFTTS 275
           +    L   F M +   S
Sbjct: 248 LDGARLKQIFGMYLVIVS 265


>gi|163752420|ref|ZP_02159612.1| hypothetical protein KT99_03459 [Shewanella benthica KT99]
 gi|161327679|gb|EDP98871.1| hypothetical protein KT99_03459 [Shewanella benthica KT99]
          Length = 267

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 1/226 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V VPVL      +G D ++  HVA+ TSL  I  TS+ S   H + G I   +LK  +  
Sbjct: 32  VAVPVLLYLLPSVGFDAAVLPHVAIATSLAAIILTSMSSARAHHKQGNIPWPLLKSVLPG 91

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL-YCERKFPDNYVKYIWGMV 165
           L   ++    + S +    L  +FA+F + M   M+   R+   +++ P   + +    V
Sbjct: 92  LIFGSLSAGFISSFLSAKLLQTSFAVFVICMAAQMIFPYRVSLVDKQMPSMPILFAVSAV 151

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
              ++  +G+GGG+     + + G  +  A   S+     IA    +  ++SGW ++ LP
Sbjct: 152 IAIIAALMGIGGGVLLIPFLSWCGLQMRNAIGFSSASGVFIALFGSVSYVFSGWNVSCLP 211

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            W+LG+V + A+L I+ IS+LI PL  K + +   K L   F++++
Sbjct: 212 EWTLGYVYLPALLAIVMISVLIAPLGVKAASIWPTKILRRIFALLL 257


>gi|227115348|ref|ZP_03829004.1| hypothetical protein PcarbP_20437 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 268

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 105/209 (50%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVPVL+  F   G++++  +H+A+GTS+  I  T++ S   H +H  +   ++      +
Sbjct: 31  MVPVLTALFAAQGVENTHLVHLALGTSMAAIVVTAISSLRTHHQHQAVLWPVVMRITPAI 90

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            I T   + + + +    L   F+ F   + + M+   +   +R+ P      + G+V G
Sbjct: 91  LIGTFAATWLATLLPTRALAIFFSCFMAYVSLQMVMNIKPKPQRQLPGTVGVSLAGLVIG 150

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S  + +GGG  T   + +    I +A  TSA V   IA    L  + +GW   GLP +
Sbjct: 151 SISALVAIGGGSLTVPFLTWCNVRIQQAIGTSAAVGLPIALSGALGYMINGWSTTGLPDY 210

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSY 256
           S+G+V++ AVL+I  +S    P+  +L++
Sbjct: 211 SVGYVSLPAVLLISAVSFFTAPVGARLAH 239


>gi|163739976|ref|ZP_02147381.1| membrane protein [Phaeobacter gallaeciensis BS107]
 gi|161386721|gb|EDQ11085.1| membrane protein [Phaeobacter gallaeciensis BS107]
          Length = 288

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 108/215 (50%), Gaps = 1/215 (0%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
           FQ +G      M + + TSL  I  TS+ S M H + G ++  IL+ W   + I  ++  
Sbjct: 58  FQTLGYGGDQLMQMCLATSLATIIVTSLRSVMSHNKKGAVDWDILRGWGPGIAIGAIIGV 117

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALG 174
           ++ S +  + L   F +  L++G  M   R         P    + I   + GFLS  +G
Sbjct: 118 MVASSLRSTTLQALFGVLALVIGCYMAFGRADWRLGSAMPKGARRMILSPMVGFLSVLMG 177

Query: 175 VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           +GGG F   LM  +   I++A AT+AG   +IA P+++  ++     +  PP ++G VN+
Sbjct: 178 IGGGSFGVPLMSLHATPIHRAVATAAGFGVIIAVPSVIGFLFLPVDPSVRPPLTVGAVNL 237

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            A ++++ ++++  P   KL++ +  K L   F++
Sbjct: 238 VAFVVVIAMTLITAPWGVKLAHAMDPKPLKRVFAV 272


>gi|94497682|ref|ZP_01304250.1| hypothetical protein SKA58_04856 [Sphingomonas sp. SKA58]
 gi|94422899|gb|EAT07932.1| hypothetical protein SKA58_04856 [Sphingomonas sp. SKA58]
          Length = 276

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 95/199 (47%), Gaps = 3/199 (1%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           G  D+I  HVA+GTS   I  TS+ S M H + G +  ++LK W   + +      L+ S
Sbjct: 50  GTKDAIA-HVAIGTSAATIIVTSIRSLMSHAKRGAVEFEVLKAWAPWIILGCGAGVLLAS 108

Query: 120 HVDKSFLNKAFAIFCLLMGI--LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
           HVD   L   F    +LM +  L+ K          P   V+       G  S  LG+GG
Sbjct: 109 HVDGRTLKMIFGGGVVLMSLNFLLPKVSGKVVSDTMPSGIVRVGIAGGLGTFSSLLGIGG 168

Query: 178 GIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
           G    ++M   G +I++A AT++G+  LIA P  +     G    GLP  SLG++NI   
Sbjct: 169 GTIAIMVMTLCGRTIHRAIATASGIGTLIAIPTTIGFAIIGLKETGLPWGSLGYINIPGT 228

Query: 238 LIILPISILITPLATKLSY 256
           L I  +S+L  PL    ++
Sbjct: 229 LAIASMSMLTAPLGVAAAH 247


>gi|301169621|emb|CBW29222.1| predicted permease [Haemophilus influenzae 10810]
          Length = 264

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 128/252 (50%), Gaps = 7/252 (2%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +CL++ A  L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I  T 
Sbjct: 7   LCLLVGA--LAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATIVITG 64

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG---I 139
           + S   H + G I  + ++    V+  +  +  L I  +D+    K FA   + +    +
Sbjct: 65  IGSAQRHHKLGNIVWQAVRILAPVIMFSVFICGLFIGRLDREISAKIFACLVVYLATKMV 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
           L +K+D++  +   P + V  I G++ G  S A G+GGG F    +   G +I +A  +S
Sbjct: 125 LSIKKDQVTTKSLTPLSSV--IGGILIGMTSSAAGIGGGGFIVPFLTARGINIKQAIGSS 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  + 
Sbjct: 183 AFCGMLLGISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATAKLP 242

Query: 260 KKYLTIGFSMIM 271
              L  GF++ +
Sbjct: 243 VSTLKKGFALFL 254


>gi|227326601|ref|ZP_03830625.1| hypothetical protein PcarcW_04479 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 268

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 105/209 (50%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVPVL+  F   G++++  +H+A+GTS+  I  T++ S   H +H  +   ++      +
Sbjct: 31  MVPVLTALFAAQGVENTHLVHLALGTSMAAIVVTAISSLRTHHQHQAVLWPVVMRITPAI 90

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            I T   + + + +    L   F+ F   + + M+   +   +R+ P      + G+V G
Sbjct: 91  LIGTFAATWLATLLPTRALAIFFSCFMAYVSLQMVLNIKPKPQRQLPGTAGVSLAGLVIG 150

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S  + +GGG  T   + +    I +A  TSA V   IA    L  + +GW   GLP +
Sbjct: 151 SISALVAIGGGSLTVPFLTWCNVRIQQAIGTSAAVGLPIALSGALGYMINGWSTTGLPDY 210

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSY 256
           S+G+V++ AVL+I  +S    P+  +L++
Sbjct: 211 SVGYVSLPAVLLISAVSFFTAPVGARLAH 239


>gi|254475496|ref|ZP_05088882.1| membrane protein [Ruegeria sp. R11]
 gi|214029739|gb|EEB70574.1| membrane protein [Ruegeria sp. R11]
          Length = 288

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 1/215 (0%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
           FQ +G      M + + TSL  I  TSV S + H + G ++  IL+ W   + +  ++  
Sbjct: 58  FQTLGYGGDQLMQMCLATSLATIIVTSVRSVLSHNKKGAVDWDILRGWGPGIAVGAIIGV 117

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALG 174
            + + +  + L   F +  L++G+ M   R       + P    + +   + GFLS  +G
Sbjct: 118 TVAASLRSTTLQALFGVLALVIGLYMAFGRADWRLGSEMPKGLRRIVLSPMVGFLSVLMG 177

Query: 175 VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           +GGG F   LM  +   I++A AT+AG   +IA P+++  ++        PP ++G VN+
Sbjct: 178 IGGGSFGVPLMSLHATPIHRAVATAAGFGVIIAVPSVIGFLFLPIDAAARPPLTVGAVNL 237

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            A ++++ ++++  P   KL++ +  K L   F++
Sbjct: 238 VAFVVVIAMTLITAPWGVKLAHAMDPKPLKRVFAI 272


>gi|332142711|ref|YP_004428449.1| membrane protein [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552733|gb|AEA99451.1| membrane protein [Alteromonas macleodii str. 'Deep ecotype']
          Length = 273

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 4/246 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++  + +   ++G  +GLFG GGG V+VP L   F          + VA+GTSL  I  +
Sbjct: 8   FVVTLCITGTIAGITAGLFGNGGGFVVVPALLAVFPFFTPPSEALVKVAIGTSLASIVVS 67

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  S M HR  G ++  IL+ W   L +      L+ ++   + L   FA   LL  +  
Sbjct: 68  SARSVMAHRAKGAVDFDILRSWSIWLILGVGGGLLIANNSSANGLTVVFAAGVLLYSVYF 127

Query: 142 LKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           L  +   R       P    K +   V G  S  LG+GGG  T + M+    +I +A AT
Sbjct: 128 LFPEFVVRPGLVFNMPKGIGKAVLAFVLGGFSALLGIGGGTPTVITMVMCQRTIQQAVAT 187

Query: 199 SAGVSALIAFPALLVRIY-SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +AGV  LI  P  +  ++        LP  ++G++NI A++ I   +I   P+  K+++ 
Sbjct: 188 AAGVGFLIGLPGAIGFLFMKHPDTASLPVGTIGYINIPALVAISIGAIFTAPIGAKMAHN 247

Query: 258 IGKKYL 263
             +K L
Sbjct: 248 FSEKKL 253


>gi|145589361|ref|YP_001155958.1| hypothetical protein Pnuc_1178 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047767|gb|ABP34394.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 272

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 129/238 (54%), Gaps = 2/238 (0%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +VD I  +++   LSG L+GL G+GGG+++VP++   F  +G +++I MH+A+ T +  
Sbjct: 2   SIVD-IAWLMLGGSLSGFLAGLLGIGGGVILVPLMILIFGRLGFNENILMHMAIATGMAS 60

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLL 136
           +  T+  + M H++ G IN K++      L +  VV        ++ ++L+  F+IF L 
Sbjct: 61  VLFTTSSAVMAHQKRGNINWKLVIALSPGLVLGAVVGGGKFFDVINGAWLSLGFSIFMLY 120

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
               M+     +  R  P  +  + +G++TG ++  LG GG   T   M++     + A 
Sbjct: 121 SSTQMILNRSPHAARALPGTFGLFAFGVLTGVIASLLGAGGAFITVPFMIWCNIKPHNAM 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A S+G+   IA  + L  IY GWG   LP +SLG+V + A+L I+  S+L  PL  ++
Sbjct: 181 ANSSGLGFPIAASSTLGYIYGGWGNASLPEYSLGYVYVPALLCIVITSMLAAPLGARV 238


>gi|220935590|ref|YP_002514489.1| protein of unknown function DUF81 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996900|gb|ACL73502.1| protein of unknown function DUF81 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 261

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 98/209 (46%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   +   G+D ++  H+A+GTSL  I PT++ S   H  HG +   ++      +  
Sbjct: 31  PVLVWLYVHQGVDAAVITHLAIGTSLATIVPTAIASARAHHAHGAVRWDLVWRLAPGVVF 90

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
             +  + +   +    L + F +F + + + ML   R   +R  P        G V G +
Sbjct: 91  GALAGATLAEFLSSDMLRRVFGVFEIALALYMLIGTRPAPQRPLPGVATLSAGGGVIGLV 150

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  LG+GGG  T   ++++  ++ +A  T++ V   IA       +  GW   GLP WS 
Sbjct: 151 SSLLGIGGGTLTVPYLVWFNVAVRQAIGTASAVGLPIALAGAAGFMIHGWQAQGLPAWSA 210

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMI 258
           G+++  A+  I   S L  P+  +L++ +
Sbjct: 211 GYIHGPALAGIAIASFLTAPIGARLTHRL 239


>gi|239995599|ref|ZP_04716123.1| membrane protein [Alteromonas macleodii ATCC 27126]
          Length = 273

 Score = 89.0 bits (219), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 4/246 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++  + +   ++G  +GLFG GGG V+VP L   F          + VA+GTSL  I  +
Sbjct: 8   FVVTLCITGAIAGITAGLFGNGGGFVVVPALLAVFPFFTPPSEALVKVAIGTSLASIVVS 67

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  S M HR  G ++  IL+ W   L +      L+ ++   + L   FA   LL  +  
Sbjct: 68  SARSVMAHRAKGAVDFDILRSWSIWLILGVGGGLLIANNSSANGLTVVFAAGVLLYSVYF 127

Query: 142 LKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           L  +   R       P    K +   V G  S  LG+GGG  T + M+    +I +A AT
Sbjct: 128 LFPEFVVRPGLVFDMPKGIGKAVLAFVLGGFSALLGIGGGTPTVITMVMCQRTIQQAVAT 187

Query: 199 SAGVSALIAFPALLVRIYSGWGLNG-LPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +AGV  LI  P  +  ++        LP  ++G++NI A++ I   +I   P+  K+++ 
Sbjct: 188 AAGVGFLIGLPGAIGFLFMKHPETASLPVGTIGYINIPALIAISIGAIFTAPIGAKMAHN 247

Query: 258 IGKKYL 263
             +K L
Sbjct: 248 FSEKKL 253


>gi|117925601|ref|YP_866218.1| hypothetical protein Mmc1_2312 [Magnetococcus sp. MC-1]
 gi|117609357|gb|ABK44812.1| protein of unknown function DUF81 [Magnetococcus sp. MC-1]
          Length = 265

 Score = 89.0 bits (219), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 130/253 (51%), Gaps = 7/253 (2%)

Query: 25  LIIVASF---LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           L++V++F    +G ++GLFGVGGG+V+VP L   F   G+D  + M +A+ TSL  I  T
Sbjct: 4   LVLVSAFAGLFAGVVAGLFGVGGGIVLVPTLLLLFVWYGVDTGVVMQMAVATSLATIIVT 63

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ +   H + G +   ++  +   L +     + + + +    L   FA+F + +G+ M
Sbjct: 64  NISASWHHHKKGAVLWPMVGWFAPGLLLGAWSGAWLAAWMAGEHLRILFALFEMAVGLKM 123

Query: 142 L--KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT-NLLMLFYGASIYKATAT 198
           L   RD       +P  + + + G V G +S   G+GGG  +   L L +G S+ +A AT
Sbjct: 124 LTASRDGGGAGLHWP-RWSRPLIGGVIGGISTLFGIGGGTLSVPTLSLLFGLSMQRAVAT 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+ +  ++A    +  + +G G+   P W +GFV     L I+  ++L TPL  K ++ +
Sbjct: 183 SSAMGLVLALFGTVGFMQAGQGVAQRPDWCVGFVAWPVFLGIITATLLTTPLGVKWAHAM 242

Query: 259 GKKYLTIGFSMIM 271
               L  GF + +
Sbjct: 243 DGVKLKRGFGLFL 255


>gi|71065697|ref|YP_264424.1| hypothetical protein Psyc_1139 [Psychrobacter arcticus 273-4]
 gi|71038682|gb|AAZ18990.1| probable integral membrane protein, DUF81 family [Psychrobacter
           arcticus 273-4]
          Length = 268

 Score = 89.0 bits (219), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 2/251 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y+  +I  +F +G  +GLFGVGGG+++VPVL   F        +  H+A+GTSL  I  T
Sbjct: 4   YVWFVIAGAF-AGVCAGLFGVGGGMIIVPVLVWIFTAYHFSPEVVTHLAIGTSLATIIVT 62

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H + G +   I ++    L I +++ + +   +D   L     +  LL+   M
Sbjct: 63  SISSLTAHNKRGGVRWDIWRNMALGLVIGSLIGAGVADAIDGDVLQAIIGVGALLISFRM 122

Query: 142 L-KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           L   ++    +  P   +++  G   G  S   G+GGG  T   + + G S+ ++  T+A
Sbjct: 123 LFFSNKEQPSKPLPPIGIQFGAGASIGLASSIFGIGGGSLTVPFLNWVGLSMKQSIGTAA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    +   + G  +  LP  ++GFV+I   L I   S +   +  KL++ +  
Sbjct: 183 ACGLPIALAGAVGFAWFGKDMMNLPDGTIGFVHITGFLFISAASFITAKVGAKLAHQLPA 242

Query: 261 KYLTIGFSMIM 271
             L   F +++
Sbjct: 243 LMLKRAFGILL 253


>gi|71083883|ref|YP_266603.1| hypothetical protein SAR11_1192 [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062996|gb|AAZ21999.1| Domain of unknown function DUF81 [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 254

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 3/218 (1%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L   F  +GID    MH+A+GTS  +I PTS +S + H +   ++  I+K +   + 
Sbjct: 17  VPFLFYIFNSLGIDQQYVMHLAVGTSFAIIIPTSTVSVLTHHKFKAVDFDIVKSYGIFVV 76

Query: 109 ITTVVTSLMISHVDKSFLNKAFA--IFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           +  +  ++  + +    L   FA  IF L + +L+LK        K    ++K I G + 
Sbjct: 77  LGVIFGTIFAATLKTKTLVLFFAIVIFLLSIYLLLLKEKEKNITLKI-KLHLKIILGFLV 135

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           GF+S  +G+GG +    ++ F+G SI +A  ++A +  LIA    +  + +G  L    P
Sbjct: 136 GFISAPMGIGGAVMNVPILKFFGYSINRAIGSAAAIGFLIALFGAIGFLITGSYLKTNIP 195

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
            S+GF+NI A LI +PI+  +  +  +  + I K  ++
Sbjct: 196 LSIGFLNIPAFLIFIPITTFMARIGARTVHTIDKNRIS 233


>gi|56697212|ref|YP_167577.1| membrane protein [Ruegeria pomeroyi DSS-3]
 gi|56678949|gb|AAV95615.1| membrane protein [Ruegeria pomeroyi DSS-3]
          Length = 274

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 1/215 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AFQ +G      M + + TSL  I  TS+ S + H + G ++ +IL+ W   + +
Sbjct: 38  PAFFYAFQTLGYGGPQLMQMCLATSLATIIVTSLRSVLSHNKKGAVDWQILRGWGPGIAV 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V+  ++ + +    L   F +  +++G  L L R         P    + +   + GF
Sbjct: 98  GAVLGVMVAASLRSVALQALFGVLGIVIGAYLGLGRAHWRLGEAMPGGLRRMVLSPIVGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  Y   I++A AT+AG   +IA P++L  +         PP +
Sbjct: 158 LSVLMGIGGGSFGVPLMSLYNTPIHRAVATAAGFGVIIAVPSVLGFLLLQIDPAQRPPLT 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           +G VN+ A  +++ ++++ TP   KL++ +  K L
Sbjct: 218 VGAVNLVAFGVVICMTLITTPWGVKLAHAMDPKPL 252


>gi|91763047|ref|ZP_01265011.1| hypothetical protein PU1002_00275 [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91717460|gb|EAS84111.1| hypothetical protein PU1002_00275 [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 261

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 3/218 (1%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L   F  +GID    MH+A+GTS  +I PTS +S + H +   ++  I+K +   + 
Sbjct: 24  VPFLFYIFNSLGIDQQYVMHLAVGTSFAIIIPTSTVSVLTHHKFKAVDFDIVKSYGIFVV 83

Query: 109 ITTVVTSLMISHVDKSFLNKAFA--IFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           +  +  ++  + +    L   FA  IF L + +L+LK        K    ++K I G + 
Sbjct: 84  LGVIFGTIFAATLKTKTLVLFFAIVIFLLSIYLLLLKEKEKNITLKI-KLHLKIILGFLV 142

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           GF+S  +G+GG +    ++ F+G SI +A  ++A +  LIA    +  + +G  L    P
Sbjct: 143 GFISAPMGIGGAVMNVPILKFFGYSINRAIGSAAAIGFLIALFGAIGFLITGSYLKTNIP 202

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
            S+GF+NI A LI +PI+  +  +  +  + I K  ++
Sbjct: 203 LSIGFLNIPAFLIFIPITTFMARIGARTVHTIDKNRIS 240


>gi|330829877|ref|YP_004392829.1| hypothetical protein B565_2177 [Aeromonas veronii B565]
 gi|328805013|gb|AEB50212.1| hypothetical protein B565_2177 [Aeromonas veronii B565]
          Length = 262

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 102/224 (45%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL   F+  GID  I  H+A+GTSL  +  T   S   HR  G ++  +++     + 
Sbjct: 29  VPVLVMTFRAQGIDPEIITHLALGTSLPTMIFTGFSSLRAHREAGAVDWVMIRRLGAGML 88

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           I   +  +  + +  S LN     F   M + M    +   ER  P      I G + G+
Sbjct: 89  IGGWLGGMTANLLSTSTLNIIIGCFAWSMALQMGLNLKPTAERHMPGPLGTGIAGTIIGW 148

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S   G+GGG  T   + +    +  A A SA  S  IA    L  +Y+GW    LP WS
Sbjct: 149 MSALFGIGGGSLTVPYLSWNSVPMRNAVAASAACSMPIALAGSLSYLYAGWDHADLPEWS 208

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           +G++ + A+L I+  S     +  KL++ +    L   F+++M 
Sbjct: 209 VGYIYLPALLGIVLTSTQFARIGAKLAHRLSPTRLKQAFALLML 252


>gi|330506349|ref|YP_004382777.1| hypothetical protein MCON_0034 [Methanosaeta concilii GP-6]
 gi|328927157|gb|AEB66959.1| integral membrane protein of unknown function (DUF81) [Methanosaeta
           concilii GP-6]
          Length = 281

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 124/257 (48%), Gaps = 3/257 (1%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + V +  + ++ YI ++++   + G   G+ GVGGG +MVPV   A   MG+D ++   V
Sbjct: 1   MQVAMIAESMLIYIIVLLLTGMVVGFACGMLGVGGGFIMVPVQIWALTSMGVDPTLSTRV 60

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A GTSL VI PTS+     H   G +  +          +   +   + SH     L   
Sbjct: 61  AFGTSLAVILPTSLCGCHGHNCQGVVLWRPGVTLGLSGLVGAFLGGTIASHAPGELLRMI 120

Query: 130 FAIFCLLMGILML-KRDRLYCERKFPDNYVKYI-WGMVTGFLSGALGVGGG-IFTNLLML 186
           F I  +   + M+  RD      +   + + YI WG+V G +SG  G+GGG I    +++
Sbjct: 121 FGIIIIGGALRMIYARDLRRGRPEVVSSLLPYILWGVVVGVISGLAGIGGGVILVPAMVI 180

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
             G ++Y+A  TS    A  A    +    +GWG+ GLP + +G++++   +++   S+L
Sbjct: 181 AMGFTMYQAVGTSTVAIAFNAVGGTIAYAINGWGVAGLPAYCVGYIDLFQFVLLAGASML 240

Query: 247 ITPLATKLSYMIGKKYL 263
                  +++ + ++ L
Sbjct: 241 TAHWGVNVTHKMSEEKL 257


>gi|332284782|ref|YP_004416693.1| hypothetical protein PT7_1529 [Pusillimonas sp. T7-7]
 gi|330428735|gb|AEC20069.1| hypothetical protein PT7_1529 [Pusillimonas sp. T7-7]
          Length = 269

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 1/225 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L+      G+DD + + +A+ TS+ VI  TS+ S   H + G +   I++     + 
Sbjct: 32  VPFLTYLISAQGVDDELAVKMAIATSMAVIIFTSISSVRAHHKRGAVRWDIVRKLAPGIV 91

Query: 109 ITTVVTSLMISHVDK-SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
           I +++ S+ +  + K ++L   F IF       M    +    R+ P    + + G   G
Sbjct: 92  IGSMIGSVGVFSILKGAYLAIFFGIFVAFSATQMFLGKKPPPARQMPGTGGQLLAGGFIG 151

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           FLSG +G GGG  +   M +   +I+ A ATSA +   IA   +   I SG  + GLPP 
Sbjct: 152 FLSGLVGAGGGFISVPFMTWCNVAIHTAVATSAALGFPIAVANVAGYIASGMSVTGLPPA 211

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           S G++ + A+ +I   S+   PL  + ++ +    L   F+++++
Sbjct: 212 SFGYIYLPALAVIAAASVCTAPLGARAAHSLPVNRLKRVFALMLY 256


>gi|68164577|gb|AAY87306.1| predicted permease [uncultured bacterium BAC17H8]
          Length = 284

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 10/227 (4%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   F  + +   I MH+ + TSL  I P S+ S  EH R G ++M + + W   + I
Sbjct: 42  PVLFLLFTYLEVPSGIVMHMVVATSLATIIPISLSSAREHYRRGAVDMAVFRHWAPFMLI 101

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM----- 164
              + + +   +D S+L   F    + +   M+ R +       PD       G      
Sbjct: 102 AAGIAAGLSGRLDSSYLQLLFGGIAIYVAATMI-RGKTSAADAAPDGSTITPLGRGATGG 160

Query: 165 ----VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
               + G  S  +G+GGG     ++      +++A  T+A    LIA P  +    +G G
Sbjct: 161 IISALIGAASALMGIGGGSIAVPVLSALQLPVHRAVGTAAAFGFLIAVPGAIGFAIAGLG 220

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
             G  P+SLGF+N+ A +II   S+   PL +++++ +  K L   F
Sbjct: 221 TEGRLPFSLGFINLPAAVIIFSTSLFFVPLGSRIAHALNPKRLRRAF 267


>gi|148652278|ref|YP_001279371.1| hypothetical protein PsycPRwf_0466 [Psychrobacter sp. PRwf-1]
 gi|148571362|gb|ABQ93421.1| protein of unknown function DUF81 [Psychrobacter sp. PRwf-1]
          Length = 270

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 113/246 (45%), Gaps = 1/246 (0%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A   +G  +GLFGVGGG+++VP L   F   G    I  H+A+GTSL  I  TS+ S 
Sbjct: 7   LLAGTFAGVCAGLFGVGGGMIIVPALVWMFTAYGYSPDIIAHLAVGTSLATIMVTSISSL 66

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-KRD 145
             H + G +  ++ K+    L + +++ + +   ++   L     +  LL+   ML   +
Sbjct: 67  TAHHKRGGVRWEVWKNMAIGLVVGSLLGAAVADQMNGLMLQALIGVAALLVAFKMLFLSN 126

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
           +    R  P   V+   G   G  S   G+GGG  T   + + G  + +A  TSA     
Sbjct: 127 KENLGRPLPSAPVQIGAGSGIGMASAIFGIGGGSLTVPFLTWAGLPMRQAVGTSAACGLP 186

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           IA        + G  + GLP  ++GFV++   + I   S +   L  K ++ +    L  
Sbjct: 187 IALAGAAGFAWFGQDVVGLPSGAIGFVHVTGFICISIASFITAKLGAKWAHQLPAATLKK 246

Query: 266 GFSMIM 271
           GF  ++
Sbjct: 247 GFGALL 252


>gi|163743187|ref|ZP_02150569.1| membrane protein [Phaeobacter gallaeciensis 2.10]
 gi|161383604|gb|EDQ07991.1| membrane protein [Phaeobacter gallaeciensis 2.10]
          Length = 288

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 1/217 (0%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
           FQ +G      M + + TSL  I  TS+ S M H + G ++  IL+ W   + I  ++  
Sbjct: 58  FQTLGYGGDQLMQMCLATSLATIIVTSLRSVMSHNKKGAVDWDILRGWGPGIAIGAIIGV 117

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALG 174
            + S +  + L   F +  L++G  M   R         P    + I   + GFLS  +G
Sbjct: 118 TVASSLRSTTLQALFGVLALVIGCYMAFGRADWRLGSAMPKGARRMILSPMVGFLSVLMG 177

Query: 175 VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           +GGG F   LM  +   I++A AT+AG   +IA P+++  ++        PP ++G VN+
Sbjct: 178 IGGGSFGVPLMSLHATPIHRAVATAAGFGVIIAVPSVIGFLFLPVEAAVRPPLTVGAVNL 237

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            A ++++ ++++  P   KL++ +  K L   F++ +
Sbjct: 238 VAFVVVIAMTLITAPWGVKLAHAMDPKPLKRVFAVFL 274


>gi|212702293|ref|ZP_03310421.1| hypothetical protein DESPIG_00304 [Desulfovibrio piger ATCC 29098]
 gi|212674286|gb|EEB34769.1| hypothetical protein DESPIG_00304 [Desulfovibrio piger ATCC 29098]
          Length = 265

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 8/226 (3%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P++   F   G+       +A+GTSL  I  TS+ S   H + G ++  I ++    + +
Sbjct: 32  PMMVAVFPSQGVPAEYVQQLALGTSLASIMVTSISSSRAHHKRGAVHWDIFRNITPGILL 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY----VKYIWGMV 165
            T +  L+ +H+   FL   F  F   + + ML   R    R+ P       V  I G++
Sbjct: 92  GTFLGGLVATHMPTLFLKAFFICFLGFVSLQMLSNYRPPASREMPGALGTAGVGGIIGLI 151

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           + F    +G+GGG  +   M F    ++ A  TSA +   IA    L  I  GW   GLP
Sbjct: 152 SSF----VGIGGGTLSVPFMSFCNVPLHHAVGTSAAIGFPIAVAGTLGYIVGGWNTPGLP 207

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
              LGFVN+ A   I   S +  P+  +LS+ +    L  GF++ +
Sbjct: 208 ADCLGFVNLTAFFGIAAASFMTAPIGARLSHSLPTDKLKKGFAVFL 253


>gi|220905134|ref|YP_002480446.1| hypothetical protein Ddes_1872 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869433|gb|ACL49768.1| protein of unknown function DUF81 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 265

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 99/219 (45%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P++   F  +G+       +A+GTSL  I  TS+ S   H + G ++  I ++    + +
Sbjct: 32  PMMVAIFPTVGVPAEYVQQMALGTSLASIMITSISSARAHNKRGAVHWDIFRNITPGILL 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T    L+ +H+    L   F  F +++   ML   R    R  P        G+  G L
Sbjct: 92  GTFAGGLIATHMPTLALKVIFICFLVVVAAQMLSGYRPPATRSMPGFAGTSGVGLGIGLL 151

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   M      ++ A  TSA +   IA    L  I  GWG   LP  +L
Sbjct: 152 SSFVGIGGGTISVPFMTTCNVPLHHAVGTSAAIGFPIAVAGTLGYIVGGWGRPDLPSMAL 211

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
           GFVN+ A+L I   S L  PL  KLS+ +    L  GF+
Sbjct: 212 GFVNLWALLGIASASFLTAPLGVKLSHALPADKLKRGFA 250


>gi|253690529|ref|YP_003019719.1| hypothetical protein PC1_4169 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251757107|gb|ACT15183.1| protein of unknown function DUF81 [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 268

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 105/211 (49%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVPVL+  F   G++++  +H+A+GTS+  I  T++ S   H +H  +   ++      +
Sbjct: 31  MVPVLTALFAAQGVENTHLVHLALGTSMAAIVVTAISSLRTHHQHQAVLWPVVMRITPAI 90

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            I T   + + + +    L   F+ F   + + M+   +   +R+ P      + G+V G
Sbjct: 91  LIGTFAATWLATLLPTRALAIFFSCFMAYVSLQMVLNIKPKPQRQLPGTAGISLAGLVIG 150

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S  + +GGG  T   + +    I +A  TSA V   IA    L  + +GW   GLP +
Sbjct: 151 SISALVAIGGGSLTVPFLTWCNVRIQQAIGTSAAVGLPIAVSGALGYLINGWSTTGLPDY 210

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+G+V++ AV +I  +S    P+  +L++ +
Sbjct: 211 SVGYVSLPAVFLISAVSFFTAPVGARLAHRL 241


>gi|119896927|ref|YP_932140.1| hypothetical protein azo0636 [Azoarcus sp. BH72]
 gi|119669340|emb|CAL93253.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
          Length = 268

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 102/211 (48%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVP+L+  F   G   +  +H+A+GTS+  I  TS+ S   H RHG +  ++++     +
Sbjct: 32  MVPMLTTLFIAQGFPLAQVVHLALGTSMAAIVLTSISSLRTHHRHGAVRWEVVRGITPGI 91

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            + T   + + +H D   L   FA+F   +   ML   +    R+ P        G+  G
Sbjct: 92  LLGTFGGTFIAAHADTVPLAIFFAVFMAYVSTQMLINVKPKPSRELPGTLGLGAAGLGIG 151

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S  + +GGG  +   M +    +  A  TSA +   IA    L  + +GWG  GLPP 
Sbjct: 152 GVSALVAIGGGSLSVPFMTWCNVKVQHAIGTSAAIGLPIALAGTLGYLINGWGEAGLPPL 211

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMI 258
           SLGFV + A++++  +S    P+   L++ +
Sbjct: 212 SLGFVYLPALVLVSGVSYFTAPVGAALAHRL 242


>gi|329888316|ref|ZP_08266914.1| hypothetical protein BDIM_02390 [Brevundimonas diminuta ATCC 11568]
 gi|328846872|gb|EGF96434.1| hypothetical protein BDIM_02390 [Brevundimonas diminuta ATCC 11568]
          Length = 273

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 115/232 (49%), Gaps = 1/232 (0%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V+VP L  AF ++G+     +HVA+GTSL  I  TS+ S   HR HG ++ ++LK W  
Sbjct: 35  TVLVPALFYAFSVLGVGGESNLHVAIGTSLLTIVATSLRSLATHRAHGAVDEQVLKTWTP 94

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGM 164
            +    ++ + +        L   + +  LL+   M L  +R    +  P  + +   G 
Sbjct: 95  WVAFGGLIGAAVAGFTSMEGLAIVYGVCLLLIAAQMGLLPERFTLRKDMPTGWGRRGVGT 154

Query: 165 VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
             G LS  +GVGGG F  + M   G  I++A AT++G    I   A L     GW   G 
Sbjct: 155 GIGLLSAMMGVGGGSFGGMTMTLCGRPIHQAVATASGFGLAIGAAAALGFAVFGWDAPGR 214

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           PP SLG+VN+ A +I+  ++ L  P   +L++ + +K L   F++ +  T+ 
Sbjct: 215 PPLSLGYVNVPAAVIMGLLTALTAPYGARLAHRLDRKMLRRAFAVYLLLTAL 266


>gi|126727613|ref|ZP_01743445.1| hypothetical protein RB2150_15580 [Rhodobacterales bacterium
           HTCC2150]
 gi|126703029|gb|EBA02130.1| hypothetical protein RB2150_15580 [Rhodobacterales bacterium
           HTCC2150]
          Length = 275

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 107/215 (49%), Gaps = 1/215 (0%)

Query: 58  LMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM 117
           L+ +D S+ +H A+ TSL  I PTS+ S   H + G+I++++   W   +    ++  L+
Sbjct: 48  LLQVDQSVAIHFAVATSLATIIPTSISSARAHHKKGSIDLEMFHAWAPWMVFGALLGGLL 107

Query: 118 ISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN-YVKYIWGMVTGFLSGALGVG 176
            +  D S L+  F +  +++ I M+        +  P +   K I     G  S  +G+G
Sbjct: 108 AAKFDASLLSGVFGVIAVIVVINMVNPKPFTLAKAPPKSIMAKAIIAGPIGAFSAMMGIG 167

Query: 177 GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           GG  +  ++      +++A  T++     IA P +L   ++G  +NGL P SLG++N+ A
Sbjct: 168 GGTLSVPILTLLSFPVHRAVGTASLFGLTIAVPGVLGFAFAGQNINGLLPISLGYINLPA 227

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            + I   +    PL  K+++ +    L + F++ +
Sbjct: 228 AVTISIATFFCAPLGVKIAHRLNASGLRLAFAVFL 262


>gi|242237519|ref|YP_002985700.1| hypothetical protein Dd703_0059 [Dickeya dadantii Ech703]
 gi|242129576|gb|ACS83878.1| protein of unknown function DUF81 [Dickeya dadantii Ech703]
          Length = 268

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 102/209 (48%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVPVL+  F   G+  S  +H+A+GTS+  I  T+V S   H +H  +   ++      +
Sbjct: 31  MVPVLTGLFAAQGVAPSHLVHLALGTSMAAIVMTAVSSLRTHHQHQAVLWPVVWRIAPAI 90

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            I T   + + + V    L   F+ F   + + M+   +    R+ P      + G+V G
Sbjct: 91  LIGTFAATWLATKVPTRVLAIFFSCFMAYVAVQMVLNIKPKPNRQLPGTPGLSLAGLVIG 150

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S  + +GGG  T   + +    I +A  TSA V   IA    L  + +GW   GLP +
Sbjct: 151 GISALVAIGGGSLTVPFLTWCNVRIQQAIGTSAAVGLPIALAGALGYMVNGWSTTGLPAF 210

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSY 256
           S+G+V++ AV++I  +S    P+  +L++
Sbjct: 211 SMGYVSLPAVVLISMVSFFTAPVGARLAH 239


>gi|117619625|ref|YP_856616.1| hypothetical protein AHA_2086 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561032|gb|ABK37980.1| putative membrane protein [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 262

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 102/224 (45%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL  +F   G+   I  H+A+GTSL  +  T   S   H+  G ++  +++     + 
Sbjct: 29  VPVLVLSFHAQGVAPDIITHLALGTSLPTMIFTGFSSLRAHQEAGAVDWVMIRRLGAGML 88

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           +   +  +  + +  S LN     F   M + M    +   ER  P      I G V G+
Sbjct: 89  VGAWLGGMTANLLSASTLNIIIGCFAWTMALQMGLNLKPKAERHLPGALGTGIAGTVIGW 148

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S   G+GGG  T   + +    +  A A SA  S  IA    L  +Y+GW    LP WS
Sbjct: 149 MSALFGIGGGSLTVPYLSWNSVPMRNAVAASAACSMPIALAGSLSYLYAGWNNPDLPEWS 208

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           LGF+ + A+L I+  S     +  KL++ +  + L   F+++M 
Sbjct: 209 LGFIYLPALLGIVLTSTQFARVGAKLAHRLSPQRLKQAFALLML 252


>gi|89068927|ref|ZP_01156309.1| membrane protein [Oceanicola granulosus HTCC2516]
 gi|89045508|gb|EAR51572.1| membrane protein [Oceanicola granulosus HTCC2516]
          Length = 274

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 1/208 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AF  +G D    M + + TSL  I  TSV S + H R G +   ILK W   + +
Sbjct: 38  PAFFYAFATLGYDSPELMRMCLATSLATIIVTSVRSLLAHNRRGAVEWDILKGWALGIAL 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-KRDRLYCERKFPDNYVKYIWGMVTGF 168
             V    + + +    L   F     ++G+ ML  R       + P+  V+++   + GF
Sbjct: 98  GAVAGVAVAASLRSQTLQAIFGGLASVVGLYMLFGRPHWRVAERMPEGPVRWVLSPLIGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   +M  +   I++A AT+AG   +IA P++   +      +  PP +
Sbjct: 158 LSVLMGIGGGSFGVPVMSLHNVPIHRAVATAAGFGVIIAVPSVAGFLLVPMSPDVRPPLT 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSY 256
           LG VN+ A  +++ ++++  P    L++
Sbjct: 218 LGAVNLVAFGLVIAMTLITAPWGAALAH 245


>gi|16272840|ref|NP_439063.1| hypothetical protein HI0902 [Haemophilus influenzae Rd KW20]
 gi|148828082|ref|YP_001292835.1| hypothetical protein CGSHiGG_08070 [Haemophilus influenzae PittGG]
 gi|260579993|ref|ZP_05847823.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|1175325|sp|P44070|Y902_HAEIN RecName: Full=UPF0721 transmembrane protein HI_0902
 gi|1573922|gb|AAC22562.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|148719324|gb|ABR00452.1| hypothetical protein CGSHiGG_08070 [Haemophilus influenzae PittGG]
 gi|260093277|gb|EEW77210.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
          Length = 264

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 5/254 (1%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +I L ++   L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I  
Sbjct: 3   TFILLCLLVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATIVI 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG-- 138
           T + S   H + G I  + ++    V+ ++  +  L I  +D+    K FA   + +   
Sbjct: 63  TGIGSAQRHHKLGNIVWQAVRILAPVIMLSVFICGLFIGRLDREISAKIFACLVVYLATK 122

Query: 139 -ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            +L +K+D++  +   P + V  I G++ G  S A G+GGG F    +   G +I +A  
Sbjct: 123 MVLSIKKDQVTTKSLTPLSSV--IGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATAK 240

Query: 258 IGKKYLTIGFSMIM 271
           +    L  GF++ +
Sbjct: 241 LPVSTLKKGFALFL 254


>gi|169634136|ref|YP_001707872.1| hypothetical protein ABSDF2663 [Acinetobacter baumannii SDF]
 gi|184157074|ref|YP_001845413.1| permease [Acinetobacter baumannii ACICU]
 gi|239501245|ref|ZP_04660555.1| permease [Acinetobacter baumannii AB900]
 gi|260555695|ref|ZP_05827915.1| permease [Acinetobacter baumannii ATCC 19606]
 gi|332872650|ref|ZP_08440618.1| hypothetical protein HMPREF0022_00216 [Acinetobacter baumannii
           6014059]
 gi|169152928|emb|CAP01969.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter baumannii]
 gi|183208668|gb|ACC56066.1| predicted permease [Acinetobacter baumannii ACICU]
 gi|193076574|gb|ABO11233.2| putative membrane protein [Acinetobacter baumannii ATCC 17978]
 gi|260410606|gb|EEX03904.1| permease [Acinetobacter baumannii ATCC 19606]
 gi|322506973|gb|ADX02427.1| permease [Acinetobacter baumannii 1656-2]
 gi|323516840|gb|ADX91221.1| permease [Acinetobacter baumannii TCDC-AB0715]
 gi|332739179|gb|EGJ70038.1| hypothetical protein HMPREF0022_00216 [Acinetobacter baumannii
           6014059]
          Length = 267

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 120/242 (49%), Gaps = 2/242 (0%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS  S   H +
Sbjct: 12  IAGFTAGLFGVGGGLIIVPILYVVFTQLHYDPAVIMHIAVGTSLATIIVTSFSSVSAHHK 71

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE- 150
            G +   + ++    L I + + + +   +    L     +F ++M   M K   +  + 
Sbjct: 72  KGAVLWPVFRNLAPGLVIGSFLGAGIADLLSGQHLQLLIGVFAVVMAYRMFKGAHVVVDP 131

Query: 151 -RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
            R+ P   ++++ G   G  S   G+GGG  T   +  +G  + KA ATSA     IA  
Sbjct: 132 TRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPYLNRHGVVMQKAVATSAACGLPIAIA 191

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             +  ++ G   +   P ++G+++I A + I  +S +   L  K+++ +  + L   F+ 
Sbjct: 192 GAIGFMWFGAKEHISVPNTIGYIHIYAFIGISVMSFVTAKLGAKVAHALSPQMLKKCFAC 251

Query: 270 IM 271
           ++
Sbjct: 252 LL 253


>gi|78355798|ref|YP_387247.1| hypothetical protein Dde_0751 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218203|gb|ABB37552.1| membrane protein, putative [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 265

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 101/207 (48%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L+ +F    +     +H+A+GTSL  I  TSV SF  H R G +N   +K     + +
Sbjct: 32  PMLTFSFTWQNVPHEHMLHLALGTSLATIIFTSVSSFRAHNRRGAVNWAAVKAVTPGILV 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T   + + S +  +FL   F IF   + + ML   +    R+ P        G   G L
Sbjct: 92  GTFAGAFVASALSTNFLKGFFGIFLYYVAVQMLLNIKPKPTRQLPGAPGMVAAGGGIGVL 151

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   + +    I+ A  T++ +   +A    L  + SGWG   LP +S+
Sbjct: 152 SSLVGIGGGTLSVPFLTWCNTPIHTAIGTASAIGLPLAISGSLGYVLSGWGQPTLPQYSV 211

Query: 230 GFVNIGAVLIILPISILITPLATKLSY 256
           G+V + A++ I+  S+L  P+  +L++
Sbjct: 212 GYVYLPAMIGIVSASMLTAPVGVRLAH 238


>gi|255067942|ref|ZP_05319797.1| putative membrane protein [Neisseria sicca ATCC 29256]
 gi|255047824|gb|EET43288.1| putative membrane protein [Neisseria sicca ATCC 29256]
          Length = 269

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 1/260 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           D I  ++     +G ++GLFGVGGG ++VPV+    QL GI       H+A+GTS  V+ 
Sbjct: 5   DIILSLLAVGSAAGFIAGLFGVGGGTLIVPVVLWTLQLQGISSHPYAQHLAIGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S     +   I+ + ++     +    ++ ++   ++    L   F +F  L+ +
Sbjct: 65  FTTFSSMYAQHKKSAIDWQTVRRMTPSMIFGVLIGAVTAKYIPTRALQIFFIVFLTLIAL 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   +    R  P        G + G  S  +G+GGG  +   +++     ++A  TS
Sbjct: 125 KTLTDSKPKASRHLPALPGLSAVGTLFGAASSWVGIGGGSLSVPFLMYCNFPAHRAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +GW +  LP  S GF+ + AV I+   +++  PL  K ++ + 
Sbjct: 185 SGLAWPIALAGTIGYLITGWNIPNLPHGSGGFLYLPAVAILSIATMIFAPLGVKTAHKLP 244

Query: 260 KKYLTIGFSMIMFTTSFVFA 279
            + L I F +++   +F  A
Sbjct: 245 ARQLKISFGIMLLLITFKMA 264


>gi|329122917|ref|ZP_08251488.1| permease [Haemophilus aegyptius ATCC 11116]
 gi|327471848|gb|EGF17288.1| permease [Haemophilus aegyptius ATCC 11116]
          Length = 264

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 5/254 (1%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +I L ++   L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I  
Sbjct: 3   TFILLCLLVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATIVI 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG-- 138
           T + S   H + G I  + ++    V+ ++  +  L I  +D+    K FA   + +   
Sbjct: 63  TGIGSAQRHHKLGNIVWQAVRILAPVIMLSVFICGLFIGRLDREISAKIFACLVVYLATK 122

Query: 139 -ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            +L +K+D++  +   P + V  I G++ G  S A G+GGG F    +   G +I +A  
Sbjct: 123 MVLSIKKDQVTTKSLTPLSSV--IGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGISGMFSFIVSGWGNPLIPEYSLGYIYLPAVLGITATSFFTSKLGASATAK 240

Query: 258 IGKKYLTIGFSMIM 271
           +    L  GF++ +
Sbjct: 241 LPVSTLKKGFALFL 254


>gi|171463863|ref|YP_001797976.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171193401|gb|ACB44362.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 272

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 112/232 (48%), Gaps = 2/232 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP +   F  +  D S+ +H+A+ T +  I  T+  +   H +HG+I+ K++      L 
Sbjct: 32  VPFMILVFNHLHFDQSVIVHMAIATGMATILFTTTSAIWAHHKHGSIDWKLVASLSPGLV 91

Query: 109 ITTVVT-SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
           I +++  S +   ++ S+L+  FAIF +   I ML   +    R  PD    + +G   G
Sbjct: 92  IGSLIGGSEIFEALNTSWLSLFFAIFIVYTSIQMLLNKKPKPGRDLPDTLGLFGFGSFAG 151

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            LS  +G GG   T   ML+     + A A+S+G+   IA  A +  +Y  WG   LP  
Sbjct: 152 ALSSLVGAGGAFITVPFMLWCNVKPHIAMASSSGIGFPIAAAATVGYMYGSWGHPNLPSG 211

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS-MIMFTTSFVF 278
           SLGFV + AV+ I  +SI       K++  +    L   F  M++   +F+F
Sbjct: 212 SLGFVYLPAVVCIAAVSIFTASPGAKMARKLDVAQLKRIFGVMLLMLAAFMF 263


>gi|71065408|ref|YP_264135.1| transmembrane protein [Psychrobacter arcticus 273-4]
 gi|71038393|gb|AAZ18701.1| probable transmembrane protein [Psychrobacter arcticus 273-4]
          Length = 274

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 118/261 (45%), Gaps = 11/261 (4%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + I  +I+ + L+G  +GLFGVGGG ++VP+L   F  M       MH+A+GTSL  I  
Sbjct: 2   ELIIFLIIGA-LAGFAAGLFGVGGGTIIVPLLFIVFTRMDYSPDSIMHLALGTSLATIIV 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS+ S M H + G +   + K+    L +   + + +   +   +L     +F L +G  
Sbjct: 61  TSISSLMAHNKKGAVMWPVFKNLAPGLAVGCFLGAGIAGQISGLYLQLIVGVFLLWLGYK 120

Query: 141 MLKRDRLYCERK----------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
           M    +   +             P    +   G V G  S  LG+GGG  T   +  YG 
Sbjct: 121 MFTDGKKRLDSNINSASNGNAVLPSKSKQLAAGGVIGVASAILGIGGGSLTVPYLTRYGV 180

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            + KA  TSA     IA    L  +  G       P ++GFV+I A L I  +S     L
Sbjct: 181 VMQKAVGTSAACGLPIAIAGALGFMVFGMQQEVNVPNTIGFVHIYAFLGISIMSFFTAKL 240

Query: 251 ATKLSYMIGKKYLTIGFSMIM 271
             K+++M+  + L   F++++
Sbjct: 241 GAKVAHMLSPQLLKKCFAVLL 261


>gi|262375655|ref|ZP_06068887.1| permease [Acinetobacter lwoffii SH145]
 gi|262309258|gb|EEY90389.1| permease [Acinetobacter lwoffii SH145]
          Length = 267

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 117/249 (46%), Gaps = 2/249 (0%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G  +GLFGVGGGL++VP+L   F  +  D S+ MH+A+GTSL  I  TS+ S M H +
Sbjct: 12  IAGFTAGLFGVGGGLIIVPILYIVFTQLQYDPSVIMHMAVGTSLATIIVTSISSVMAHHQ 71

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE- 150
            G +   + ++    L   + + + +  ++    L      F + +   M +   +  + 
Sbjct: 72  RGAVLWPVFRNLAPGLIFGSFLGAGIADYLSGQGLQLLIGFFAVWVAFRMFRGAHIQIDP 131

Query: 151 -RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
            +K P   V+   G   G  S   G+GGG  T   +   G  + KA ATSA     IA  
Sbjct: 132 NQKLPSTPVQIAAGGGIGVASAIFGIGGGSLTVPFLNRCGIVMQKAVATSAACGLPIAVA 191

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             L  I+ G       P ++G+++I A + I  +S     L  K+++++    L   F+ 
Sbjct: 192 GALGFIWFGKQAQVTVPNTIGYIHIYAFIGISMMSFFTAKLGAKVAHLLSPAVLKKCFAA 251

Query: 270 IMFTTSFVF 278
           ++ T    F
Sbjct: 252 LLTTVGLYF 260


>gi|148826453|ref|YP_001291206.1| hypothetical protein CGSHiEE_07500 [Haemophilus influenzae PittEE]
 gi|229845954|ref|ZP_04466066.1| thymidylate synthase [Haemophilus influenzae 7P49H1]
 gi|148716613|gb|ABQ98823.1| thymidylate synthase [Haemophilus influenzae PittEE]
 gi|229810958|gb|EEP46675.1| thymidylate synthase [Haemophilus influenzae 7P49H1]
 gi|309973600|gb|ADO96801.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
          Length = 264

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 129/254 (50%), Gaps = 5/254 (1%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +I L ++   L+G L+GLFG+GGGLV+VP+L     ++ + +S+ M  A+GTS   I  
Sbjct: 3   TFILLCLLVGALAGFLAGLFGIGGGLVIVPMLVYLLPIVDVPESLLMSTALGTSFATIVI 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG-- 138
           T + S   H + G I  + ++    V+ ++  +  L I  +D+    K FA   + +   
Sbjct: 63  TGIGSAQRHHKLGNIVWQAVRILAPVIMLSVFICGLFIGRLDREISAKIFACLVVYLATK 122

Query: 139 -ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            +L +K+D++  +   P + V  I G++ G  S A G+GGG F    +   G +I +A  
Sbjct: 123 MVLSIKKDQVTTKPLTPLSSV--IGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATSK 240

Query: 258 IGKKYLTIGFSMIM 271
           +    L  GF++ +
Sbjct: 241 LPVSTLKKGFALFL 254


>gi|260581730|ref|ZP_05849527.1| thymidylate synthase [Haemophilus influenzae NT127]
 gi|260095323|gb|EEW79214.1| thymidylate synthase [Haemophilus influenzae NT127]
          Length = 264

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 129/252 (51%), Gaps = 7/252 (2%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +CL++ A  L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I  T 
Sbjct: 7   LCLLVGA--LAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATIVITG 64

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG---I 139
           + S   H + G I  + ++    V+ ++  +  L I  +D+    K FA   + +    +
Sbjct: 65  IGSAQRHHKLGNIVWQAVRILAPVIMLSVFICGLFIGRLDREISAKIFACLVVYLATKMV 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
           L +K+D++  +   P + V  I G++ G  S A G+GGG F    +   G +I +A  +S
Sbjct: 125 LSIKKDQVTTKPLTPLSSV--IGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIGSS 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  + 
Sbjct: 183 AFCGMLLGISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATAKLP 242

Query: 260 KKYLTIGFSMIM 271
              L  GF++ +
Sbjct: 243 VSTLKKGFALFL 254


>gi|56476420|ref|YP_158009.1| hypothetical protein ebA1817 [Aromatoleum aromaticum EbN1]
 gi|56312463|emb|CAI07108.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 268

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 99/212 (46%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVPVL+  F   G      +H+A+GTS+  I  TS+ S   H RHG +   +++     
Sbjct: 31  IMVPVLTSLFIAQGFSADNVVHLALGTSMAAIVMTSLSSLRAHHRHGAVRWDVVRSITPG 90

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + + T   + + S V    L   FA F   + + ML   +    R  P        G   
Sbjct: 91  ILLGTFAATFIASRVASEPLAIFFAGFMAYVALQMLANIKPKPSRDLPGLLGMSAVGAGI 150

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  + +GGG  +   M +    ++ A  TSA +   IA    +  + +GW   G+P 
Sbjct: 151 GGVSALVAIGGGSLSVPFMTWCNVKVHNAIGTSAAIGLPIALAGTVGYLVNGWDGTGMPE 210

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMI 258
            SLGF+ + A+L++  +S+   P+  KL++ +
Sbjct: 211 HSLGFIYLPALLLVSGVSMFTAPVGAKLAHQL 242


>gi|145628168|ref|ZP_01783969.1| thymidylate synthase [Haemophilus influenzae 22.1-21]
 gi|319897610|ref|YP_004135807.1| hypothetical protein HIBPF14100 [Haemophilus influenzae F3031]
 gi|144979943|gb|EDJ89602.1| thymidylate synthase [Haemophilus influenzae 22.1-21]
 gi|317433116|emb|CBY81490.1| conserved hypothetical protein [Haemophilus influenzae F3031]
          Length = 264

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 5/254 (1%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +I L ++   L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I  
Sbjct: 3   TFILLCLLVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATIVI 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG-- 138
           T + S   H + G I  + ++    V+ ++  +  L I  +D+    K FA   + +   
Sbjct: 63  TGIGSAQRHHKLGNIVWQAVRILAPVIMLSVFICGLFIGRLDREISAKIFACLVVYLATK 122

Query: 139 -ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            +L +K+D++  +   P + V  I G++ G  S A G+GGG F    +   G +I +A  
Sbjct: 123 MVLSIKKDQVTTKPLTPLSSV--IGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATAK 240

Query: 258 IGKKYLTIGFSMIM 271
           +    L  GF++ +
Sbjct: 241 LPVSTLKKGFALFL 254


>gi|46581187|ref|YP_011995.1| hypothetical protein DVU2783 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120601579|ref|YP_965979.1| hypothetical protein Dvul_0529 [Desulfovibrio vulgaris DP4]
 gi|46450608|gb|AAS97255.1| membrane protein, putative [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120561808|gb|ABM27552.1| protein of unknown function DUF81 [Desulfovibrio vulgaris DP4]
 gi|311234858|gb|ADP87712.1| protein of unknown function DUF81 [Desulfovibrio vulgaris RCH1]
          Length = 266

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 7/214 (3%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VP+L+ AF L  I D    H+A+GTSLG I  TSV SF  H + G +   + ++ +F 
Sbjct: 29  VIVPMLNFAFALEHIPDQFIQHLALGTSLGSIMFTSVSSFRAHHKRGAV---LWREVVFR 85

Query: 107 LPITTVVTSLMISHV----DKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW 162
           +    +  +L+ S V      SFL   F  F   +   ML   +    R+ P +   +  
Sbjct: 86  ITPGIITGTLLGSWVAAGLSTSFLKGFFVCFLYWVAAQMLLNLKPKASRELPGSGGMFGM 145

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           G V G +S  +G+GGG  +   M +    ++ A  TSA +   IA    +  I +G  + 
Sbjct: 146 GNVIGVVSSLVGIGGGTLSVPFMAWCNVPMHTAIGTSAAIGFPIAVAGTVGYIVNGLAVA 205

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           GLP  + GF+++ A++ I+  S+   PL  +L++
Sbjct: 206 GLPENTFGFIHVPALIGIVGASVFTAPLGARLAH 239


>gi|145632280|ref|ZP_01788015.1| predicted permease [Haemophilus influenzae 3655]
 gi|145634070|ref|ZP_01789781.1| predicted permease [Haemophilus influenzae PittAA]
 gi|229844042|ref|ZP_04464183.1| predicted permease [Haemophilus influenzae 6P18H1]
 gi|144987187|gb|EDJ93717.1| predicted permease [Haemophilus influenzae 3655]
 gi|145268514|gb|EDK08507.1| predicted permease [Haemophilus influenzae PittAA]
 gi|229813036|gb|EEP48724.1| predicted permease [Haemophilus influenzae 6P18H1]
          Length = 264

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 5/254 (1%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +I L ++   L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I  
Sbjct: 3   TFILLCLLVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATIVI 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG-- 138
           T + S   H + G I  + ++    V+ ++  +  L I  +D+    K FA   + +   
Sbjct: 63  TGIGSAQRHHKLGNIVWQAVRILAPVIMLSVFICGLFIGRLDREISAKIFACLVVYLATK 122

Query: 139 -ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            +L +K+D++  +   P + V  I G++ G  S A G+GGG F    +   G +I +A  
Sbjct: 123 MVLSIKKDQVTTKPLTPLSSV--IGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGVSGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATSK 240

Query: 258 IGKKYLTIGFSMIM 271
           +    L  GF++ +
Sbjct: 241 LPVSTLKKGFALFL 254


>gi|145638276|ref|ZP_01793886.1| thymidylate synthase [Haemophilus influenzae PittII]
 gi|145272605|gb|EDK12512.1| thymidylate synthase [Haemophilus influenzae PittII]
 gi|309751430|gb|ADO81414.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
          Length = 264

 Score = 86.3 bits (212), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 127/254 (50%), Gaps = 5/254 (1%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +I L ++   L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I  
Sbjct: 3   TFILLCLLVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATIVI 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG-- 138
           T + S   H + G I  + ++    V+  +  +  L I  +D+    K FA   + +   
Sbjct: 63  TGIGSAQRHHKLGNIVWQAVRILAPVIMFSVFICGLFIGRLDREISAKIFACLVVYLATK 122

Query: 139 -ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            +L +K+D++  +   P + V  I G++ G  S A G+GGG F    +   G +I +A  
Sbjct: 123 MVLSIKKDQVTTKSLTPLSSV--IGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATAK 240

Query: 258 IGKKYLTIGFSMIM 271
           +    L  GF++ +
Sbjct: 241 LPVSTLKKGFALFL 254


>gi|294139695|ref|YP_003555673.1| hypothetical protein SVI_0924 [Shewanella violacea DSS12]
 gi|293326164|dbj|BAJ00895.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 262

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 1/234 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VPVL      +G D  +  HVA+ TSL  I  TS+ S   H + G I   +LK  +  
Sbjct: 27  IAVPVLLYLLPWVGFDVGVLPHVAIATSLAAIILTSLSSARAHHKQGNIPWPLLKPILPG 86

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL-YCERKFPDNYVKYIWGMV 165
           L + ++   ++ + +    L  +FA+F + M   M+   RL   +++ P   + +    V
Sbjct: 87  LILGSLSAGIISTFISADLLQTSFAVFVICMAAQMIFPFRLSEADKQMPSTPILFAVSTV 146

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
              ++  +G+GGG+     + + G  +  A   S+     IA       + SGW ++GLP
Sbjct: 147 IAIIAALMGIGGGVLLIPFLSWCGLQMRNAIGFSSVSGVFIALFGSASYVLSGWNVSGLP 206

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            W+LG+V + A+L I+  S+L+ PL  K + +   K L   F++++       A
Sbjct: 207 EWTLGYVYLPALLGIVITSVLMAPLGVKAASIWPTKILKRIFALLLIVVGLKLA 260


>gi|260550986|ref|ZP_05825191.1| permease [Acinetobacter sp. RUH2624]
 gi|260405934|gb|EEW99421.1| permease [Acinetobacter sp. RUH2624]
          Length = 267

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 120/242 (49%), Gaps = 2/242 (0%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS  S   H +
Sbjct: 12  IAGFTAGLFGVGGGLIIVPILYVVFTQLHYDPAVIMHIAVGTSLATIIVTSFSSVSAHHK 71

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE- 150
            G +   + ++    L + + + + +   +    L     +F ++M   M K   +  + 
Sbjct: 72  KGAVLWSVFRNLAPGLVLGSFLGAGIADLLSGQHLQLLIGVFAVVMAYRMFKGANVVVDP 131

Query: 151 -RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
            R+ P   ++++ G   G  S   G+GGG  T   +  +G  + KA ATSA     IA  
Sbjct: 132 TRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPYLNRHGVVMQKAVATSAACGLPIAVA 191

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             +  ++ G   +   P ++G+V+I A + I  +S +   L  K+++ +  + L   F+ 
Sbjct: 192 GAIGFMWFGAKEHISVPNTIGYVHIYAFIGISVMSFVTAKLGAKVAHALSPQMLKKCFAC 251

Query: 270 IM 271
           ++
Sbjct: 252 LL 253


>gi|226953500|ref|ZP_03823964.1| transmembrane protein [Acinetobacter sp. ATCC 27244]
 gi|226835785|gb|EEH68168.1| transmembrane protein [Acinetobacter sp. ATCC 27244]
          Length = 266

 Score = 85.9 bits (211), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 2/249 (0%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS+ S M H +
Sbjct: 12  IAGFTAGLFGVGGGLIIVPILYIVFTQLNYDPNVIMHIAVGTSLATIIVTSISSVMAHHK 71

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE- 150
            G +   + ++    L + + + + +   +    L     IF + M   M +      + 
Sbjct: 72  KGAVLWSVFRNLAPGLVLGSFLGAGIADLMSGQHLQLVIGIFAIWMAFKMFRGAHGVVDP 131

Query: 151 -RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
            R  P   ++   G   G  S   G+GGG  T   +  YG  + KA ATSA     IA  
Sbjct: 132 NRHLPSAPIQLAAGGGIGVASAIFGIGGGSLTVPFLNRYGVVMQKAVATSAACGLPIAVA 191

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             +  ++ G       P ++G+V+I A + I  +S +   +  ++++ +    L   F+ 
Sbjct: 192 GAVGFMWFGTKQQVEVPNTIGYVHIYAFIGISIMSFITAKVGARVAHRLSPAMLKKCFAG 251

Query: 270 IMFTTSFVF 278
           ++ T    F
Sbjct: 252 LLVTVGCYF 260


>gi|54307784|ref|YP_128804.1| hypothetical protein PBPRA0579 [Photobacterium profundum SS9]
 gi|46912207|emb|CAG19002.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 267

 Score = 85.9 bits (211), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 111/222 (50%), Gaps = 4/222 (1%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP L     L GID+S+ MH+A+ TSL  I  TS  S   H + G I+  I+K     +
Sbjct: 34  VVPALVWLLPLAGIDNSLVMHMALATSLASIVLTSGASARNHIKRGNIDYSIVKSMAPGI 93

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            +  +  S++   V    L K FA   LL+ + ML   R+  +R  P +      G V G
Sbjct: 94  VLGGLGGSVIAEMVPTELLPKIFATIVLLLALQMLLSMRMTSQRPIPSSIACACSGGVIG 153

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S   G+GGG  T   + ++G  + +A   ++   A+IA   ++  I+SG     LPP 
Sbjct: 154 VISSLAGIGGGSLTVPYLSWHGVEMRRAIGCASLSGAIIAVAGMVGFIFSGLNEEALPPM 213

Query: 228 SLGFVNIGAVLIILPISILIT----PLATKLSYMIGKKYLTI 265
           S+G+V + A++ I+  S++ T     LA++L  M  KK   I
Sbjct: 214 SIGYVYLPALIGIVSTSVITTRYGAALASRLPTMTLKKIFAI 255


>gi|145636967|ref|ZP_01792631.1| prolipoprotein diacylglyceryl transferase [Haemophilus influenzae
           PittHH]
 gi|145269825|gb|EDK09764.1| prolipoprotein diacylglyceryl transferase [Haemophilus influenzae
           PittHH]
          Length = 264

 Score = 85.9 bits (211), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 127/254 (50%), Gaps = 5/254 (1%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +I L +    L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I  
Sbjct: 3   TFILLCLFVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATIVI 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG-- 138
           T + S   H + G I  + ++    V+ ++  +  L I  +D+    K FA   + +   
Sbjct: 63  TGIGSAQRHHKLGNIVWQAVRILAPVIMLSVFICGLFIGRLDREISAKIFACLVVYLATK 122

Query: 139 -ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            +L +K+D++  +   P + V  I G++ G  S A G+GGG F    +   G +I +A  
Sbjct: 123 MVLSIKKDQVTTKPLTPLSSV--IGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATSK 240

Query: 258 IGKKYLTIGFSMIM 271
           +    L  GF++ +
Sbjct: 241 LPVSTLKKGFALFL 254


>gi|34495958|ref|NP_900173.1| hypothetical protein CV_0503 [Chromobacterium violaceum ATCC 12472]
 gi|34101812|gb|AAQ58180.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 269

 Score = 85.9 bits (211), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 113/225 (50%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++VPV+        +  +   H+A+GTSL V+  TS+ S   H + G ++ +I++     
Sbjct: 31  IIVPVVLAVLSAAHLGGAHAQHLAVGTSLAVMVFTSLSSVRAHHKKGAVDWRIVRGMAPA 90

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           +   T++ SL+   +    L   F ++   + + ML   +    R+ P    +   G   
Sbjct: 91  MVAGTLLGSLIAGWISGLALRWFFVVYAYAVALQMLAGRQPKGGREMPGWGGQGAAGGAI 150

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  +G+GGG  +   M +    ++ A ATSA +   IA    +  +YSGWG  GLPP
Sbjct: 151 GMISSWVGIGGGSMSVPFMSWCNVPVHTAIATSAALGWPIAVSGAVGYVYSGWGAPGLPP 210

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            ++GFV + A+L ++ +++L+ P   K ++ +    L   F+++M
Sbjct: 211 GAVGFVYLPAMLALMLMTVLLAPAGAKAAHRLPVPKLKKAFAVLM 255


>gi|330447406|ref|ZP_08311055.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491597|dbj|GAA05552.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 267

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 14/196 (7%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP-------ITTV 112
           GI   + MH+A+ TSL  I  TS+ S   H + G I+  ++K   F+ P         +V
Sbjct: 46  GIASHLVMHIALATSLASIVMTSMASARNHFKLGNIDFSVVK---FLAPGIIAGGLSGSV 102

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGA 172
           V  L+ SH    +L K FA+  L + I ML   ++  ++  P + V  + G V G +S  
Sbjct: 103 VAELIPSH----YLPKVFAVIVLCLAIQMLLSMKVVNDKPLPSSPVCAVSGGVIGLISSL 158

Query: 173 LGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
            G+GGG  T   + ++G  + +A  TS+ V  LIA   ++  IY+G G   LP +S+G+V
Sbjct: 159 AGIGGGSLTVPYLSYFGVEMRRAIGTSSLVGLLIAISGMIGFIYAGVGSESLPKYSVGYV 218

Query: 233 NIGAVLIILPISILIT 248
            + A++ I   S++ T
Sbjct: 219 YLPALIGIAATSMIAT 234


>gi|169797013|ref|YP_001714806.1| hypothetical protein ABAYE3014 [Acinetobacter baumannii AYE]
 gi|213156583|ref|YP_002318244.1| hypothetical protein AB57_0847 [Acinetobacter baumannii AB0057]
 gi|215484473|ref|YP_002326708.1| hypothetical protein ABBFA_002816 [Acinetobacter baumannii
           AB307-0294]
 gi|301347730|ref|ZP_07228471.1| hypothetical protein AbauAB0_15815 [Acinetobacter baumannii AB056]
 gi|301512478|ref|ZP_07237715.1| hypothetical protein AbauAB05_12872 [Acinetobacter baumannii AB058]
 gi|301594390|ref|ZP_07239398.1| hypothetical protein AbauAB059_01225 [Acinetobacter baumannii
           AB059]
 gi|332852101|ref|ZP_08433928.1| hypothetical protein HMPREF0021_01501 [Acinetobacter baumannii
           6013150]
 gi|332867499|ref|ZP_08437652.1| hypothetical protein HMPREF0020_01264 [Acinetobacter baumannii
           6013113]
 gi|169149940|emb|CAM87834.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter baumannii AYE]
 gi|213055743|gb|ACJ40645.1| hypothetical protein AB57_0847 [Acinetobacter baumannii AB0057]
 gi|213987788|gb|ACJ58087.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
 gi|332729473|gb|EGJ60812.1| hypothetical protein HMPREF0021_01501 [Acinetobacter baumannii
           6013150]
 gi|332733916|gb|EGJ65061.1| hypothetical protein HMPREF0020_01264 [Acinetobacter baumannii
           6013113]
          Length = 267

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 119/242 (49%), Gaps = 2/242 (0%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G  +GLFGVGGGL++VP+L   F  +  D  + MH+A+GTSL  I  TS  S   H +
Sbjct: 12  IAGFTAGLFGVGGGLIIVPILYVVFTQLHYDPVVIMHIAVGTSLATIIVTSFSSVSAHHK 71

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE- 150
            G +   + ++    L I + + + +   +    L     +F ++M   M K   +  + 
Sbjct: 72  KGAVLWPVFRNLAPGLVIGSFLGAGIADLLSGQHLQLLIGVFAVVMAYRMFKGAHVVVDP 131

Query: 151 -RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
            R+ P   ++++ G   G  S   G+GGG  T   +  +G  + KA ATSA     IA  
Sbjct: 132 TRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPYLNRHGVVMQKAVATSAACGLPIAIA 191

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             +  ++ G   +   P ++G+++I A + I  +S +   L  K+++ +  + L   F+ 
Sbjct: 192 GAIGFMWFGAKEHISVPNTIGYIHIYAFIGISVMSFVTAKLGAKVAHALSPQMLKKCFAC 251

Query: 270 IM 271
           ++
Sbjct: 252 LL 253


>gi|260771791|ref|ZP_05880709.1| hypothetical protein VIB_000229 [Vibrio metschnikovii CIP 69.14]
 gi|260613083|gb|EEX38284.1| hypothetical protein VIB_000229 [Vibrio metschnikovii CIP 69.14]
          Length = 265

 Score = 85.5 bits (210), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 11/203 (5%)

Query: 59  MGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPIT-----TVV 113
           MGI+  I MH+A+ TSL  I  TS+ S + H + G I++ ++K W+    +T     +VV
Sbjct: 42  MGINPEIVMHIALATSLATIIITSISSALNHLKLGNIDLFVVK-WLLPGVLTGGFLGSVV 100

Query: 114 TSLMISHVDKSFLNKAFAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGA 172
              + SH    +L K F +  L + + M++   +    R  P   V  + G   G +S  
Sbjct: 101 AEWIPSH----YLPKVFGVIVLALALQMVRSSMQARSTRPMPGAIVTLLSGNGIGIISTL 156

Query: 173 LGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
            G+GGG  T   +  +G  + KA  +SA    +IA   +L  I  G+ +  LP +SLG+V
Sbjct: 157 AGIGGGSLTVPFLNHHGVEMRKAVGSSAVCGLVIAISGMLGFILHGYRVENLPEYSLGYV 216

Query: 233 NIGAVLIILPISILITPLATKLS 255
            + A+L I   SIL T +  KL+
Sbjct: 217 YLPALLAIASTSILTTRIGAKLA 239


>gi|293609096|ref|ZP_06691399.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829669|gb|EFF88031.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 267

 Score = 85.5 bits (210), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 118/242 (48%), Gaps = 2/242 (0%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS  S   H +
Sbjct: 12  IAGFTAGLFGVGGGLIIVPILYVVFTQLHYDPAVIMHIAVGTSLATIIVTSFSSVSAHHK 71

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE- 150
            G +   + ++    L I + + + +   +    L     IF ++M   M K   +  + 
Sbjct: 72  KGAVLWPVFRNLAPGLVIGSFLGAGIADLMSGQHLQLLIGIFAVVMAYRMFKGAHVVVDP 131

Query: 151 -RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
            R+ P   ++++ G   G  S   G+GGG  T   +  +G  + KA ATSA     IA  
Sbjct: 132 NRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPYLNRHGVIMQKAVATSAACGLPIAVA 191

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             +  ++ G       P ++G+V+I A + I  +S +      K+++ +  + L   F+ 
Sbjct: 192 GAIGFMWFGAKEQISVPNTIGYVHIYAFIGISVMSFVTAKFGAKVAHALSPQMLKKCFAC 251

Query: 270 IM 271
           ++
Sbjct: 252 LL 253


>gi|68249489|ref|YP_248601.1| permease [Haemophilus influenzae 86-028NP]
 gi|68057688|gb|AAX87941.1| predicted permease [Haemophilus influenzae 86-028NP]
          Length = 264

 Score = 85.5 bits (210), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 127/254 (50%), Gaps = 5/254 (1%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +I L ++   L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I  
Sbjct: 3   TFILLCLLVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATIVI 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG-- 138
           T + S   H + G I  + ++    V+ ++  +  L I  +D+    K FA   + +   
Sbjct: 63  TGIGSAQRHHKLGNIVWQAVRILAPVIMLSVFICGLFIGRLDREISAKIFACLVVYLATK 122

Query: 139 -ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            +L +K+D++  +   P   V  I G++ G  S A G+GGG F    +   G +I +A  
Sbjct: 123 MVLSIKKDQVTTKPLTPLASV--IGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGVSGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATAK 240

Query: 258 IGKKYLTIGFSMIM 271
           +    L  GF++ +
Sbjct: 241 LPVSTLKKGFALFL 254


>gi|299771371|ref|YP_003733397.1| permease [Acinetobacter sp. DR1]
 gi|298701459|gb|ADI92024.1| permease [Acinetobacter sp. DR1]
          Length = 267

 Score = 85.5 bits (210), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 119/242 (49%), Gaps = 2/242 (0%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS  S   H +
Sbjct: 12  IAGFTAGLFGVGGGLIIVPILYVVFTQLHYDPAVIMHIAVGTSLATIIVTSFSSVSAHHK 71

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE- 150
            G +   + ++    L I + + + +   +    L     +F ++M   M K   +  + 
Sbjct: 72  KGAVLWPVFRNLAPGLVIGSFLGAGIADLMSGQHLQLLIGVFAVVMAYRMFKGANVVVDP 131

Query: 151 -RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
            R+ P   ++++ G   G  S   G+GGG  T   +  +G  + KA ATSA     IA  
Sbjct: 132 TRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPYLNRHGVVMQKAVATSAACGLPIAIA 191

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             +  ++ G   +   P ++G+V+I A + I  +S +      K+++ +  + L   F+ 
Sbjct: 192 GAIGFMWFGAKEHISVPNTIGYVHIYAFIGISVMSFVTAKFGAKVAHALSPQMLKKCFAC 251

Query: 270 IM 271
           ++
Sbjct: 252 LL 253


>gi|332702666|ref|ZP_08422754.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332552815|gb|EGJ49859.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 263

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 107/226 (47%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L  AF  +G      MH+A+GTSL  I  TS+ SF  H + G +   ++K     + +
Sbjct: 30  PALVFAFTGLGYPAEHIMHLALGTSLASIMFTSISSFRAHHKRGAVLWSVVKAITPGIIV 89

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T   S + S +   FL   F  F   + I ML   +   +R  P     +  G   G +
Sbjct: 90  GTYAGSYVASMLSTGFLKGFFVAFLYWVSIQMLLNIKPKPKRALPGTPGMFAAGSTIGVV 149

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   M      ++ A  TSA +   IA    +  + +G    GLPP S+
Sbjct: 150 SSLVGIGGGSLSVPFMTLCNIPMHTAVGTSAAIGFPIAVAGAVGYLVNGLSAQGLPPMSI 209

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           G++++ A++ +  +S+L  PL  KL++ +    L   F++++  T+
Sbjct: 210 GYISMPALIGVAGMSVLTAPLGAKLAHALPVDKLKKIFALLLIITA 255


>gi|319775165|ref|YP_004137653.1| hypothetical protein HICON_05000 [Haemophilus influenzae F3047]
 gi|317449756|emb|CBY85963.1| conserved hypothetical protein [Haemophilus influenzae F3047]
          Length = 264

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 5/254 (1%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +I L ++   L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I  
Sbjct: 3   TFILLCLLVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATIVI 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG-- 138
           T + S   H + G I  + ++    V+  +  +  L I  +D+    K FA   + +   
Sbjct: 63  TGIGSAQRHHKLGNIVWQAVRILAPVIMFSVFICGLFIGRLDREISAKIFACLVVYLATK 122

Query: 139 -ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            +L +K+D++  +   P   V  I G++ G  S A G+GGG F    +   G +I +A  
Sbjct: 123 MVLSIKKDQVTTKPLTPLASV--IGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATAK 240

Query: 258 IGKKYLTIGFSMIM 271
           +    L  GF++ +
Sbjct: 241 LPVSTLKKGFALFL 254


>gi|323492565|ref|ZP_08097711.1| hypothetical protein VIBR0546_00879 [Vibrio brasiliensis LMG 20546]
 gi|323313167|gb|EGA66285.1| hypothetical protein VIBR0546_00879 [Vibrio brasiliensis LMG 20546]
          Length = 254

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 107/212 (50%), Gaps = 8/212 (3%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP L       GI+ SI MH+A+ TSL  I  TS  S + H + G ++M ++K W+  +
Sbjct: 22  VVPALLFMLPAAGIEASISMHIALATSLATIIATSGSSALNHFKLGNVDMFVVK-WL--M 78

Query: 108 PITTVVTSLMISHVDK----SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG 163
           P   VV   + ++V +      L + F I  LL+ I ML   R    +  P       +G
Sbjct: 79  P-GVVVGGFLGANVAEWIPSQHLPRVFGIIVLLLAIQMLFSIRGKASKSMPGTAATMAYG 137

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
              G +S   G+GGG  +   +  +G  + KA  +S+    LIA   ++  I  G+ ++ 
Sbjct: 138 TGIGVISSLAGIGGGSLSVPFLNRHGIEMRKAVGSSSVCGCLIAVSGMIGFILHGYQVDA 197

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           LPP+S+G+V + A++ I   S+L T +  KL+
Sbjct: 198 LPPYSVGYVYLPALIAIASTSMLTTRIGAKLA 229


>gi|262372627|ref|ZP_06065906.1| transmembrane protein [Acinetobacter junii SH205]
 gi|262312652|gb|EEY93737.1| transmembrane protein [Acinetobacter junii SH205]
          Length = 280

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 3/267 (1%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
             S+  F+ +  +V+ I  + + + L+G  +GLFGVGGGL++VP+L   F  MG    + 
Sbjct: 3   QLSIHPFILRKYLVELIIFLAIGA-LAGFAAGLFGVGGGLIIVPLLYIVFTQMGYQPDVI 61

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           MH+A+GTSL  I  TS+ S + H ++  +   + K+    L + + + + +   +  + L
Sbjct: 62  MHMALGTSLATIIVTSISSLIAHNKNSAVIWPVFKNLTPGLILGSFLGAGIAGLLSGANL 121

Query: 127 NKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
                IF + +   M    ++ +   +  P    +   G   G  S   G+GGG  T   
Sbjct: 122 QLIIGIFVIWVAYKMFFGAKNVIDQGKVLPSTTRQIFAGTGIGVASAIFGIGGGSLTVPY 181

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +  YG  + KA  TSA     IA    L  I+ G   +   P ++GFV+I A L I  +S
Sbjct: 182 LNHYGVVMQKAVGTSAACGLPIAIAGALGFIFFGMKQHINVPNTIGFVHIYAFLGISIMS 241

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIM 271
            +   L  K ++++    L   F++++
Sbjct: 242 FMTAKLGAKTAHILSPIVLKKCFALML 268


>gi|93005732|ref|YP_580169.1| hypothetical protein Pcryo_0904 [Psychrobacter cryohalolentis K5]
 gi|92393410|gb|ABE74685.1| protein of unknown function DUF81 [Psychrobacter cryohalolentis K5]
          Length = 298

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 11/262 (4%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V+ I  +I+ + L+G  +GLFGVGGG ++VP+L   F  M       MH+A+GTSL  I 
Sbjct: 25  VELIIFLIIGA-LAGFAAGLFGVGGGTIIVPLLFIVFTQMDYSPDSIMHLALGTSLATII 83

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ S M H + G +   + K+    L I   + + +   +   +L     +F L +  
Sbjct: 84  VTSISSLMAHNKKGAVMWPVFKNLAPGLAIGCFLGAGIAGQISGLYLQLIVGVFLLWVAY 143

Query: 140 LML----------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            M             D      + P    +   G V G  S   G+GGG  T   +  YG
Sbjct: 144 KMFFAGKKQVVSHADDVNGANTELPSKPKQLAAGGVIGIASAIFGIGGGSLTVPYLTRYG 203

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             + KA  TSA     IA    L  ++ G       P ++GFV+I A L I  +S     
Sbjct: 204 VVMQKAVGTSAACGLPIAIAGALGFMFFGMQQQVDVPNTIGFVHIYAFLGISIMSFFTAK 263

Query: 250 LATKLSYMIGKKYLTIGFSMIM 271
           L  K+++++  + L   F++++
Sbjct: 264 LGAKVAHILSPELLKKCFAVLL 285


>gi|325121129|gb|ADY80652.1| hypothetical protein BDGL_000066 [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 267

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 118/242 (48%), Gaps = 2/242 (0%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS  S   H +
Sbjct: 12  IAGFTAGLFGVGGGLIIVPILYVVFTQLHYDPAVIMHIAVGTSLATIIVTSFSSVSAHHK 71

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE- 150
            G +   + ++    L + + + + +   +    L     IF ++M   M K   +  + 
Sbjct: 72  KGAVLWPVFRNLAPGLVLGSFLGAGIADLMSGQHLQLLIGIFAVVMAYRMFKGAHVVVDP 131

Query: 151 -RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
            R+ P   ++++ G   G  S   G+GGG  T   +  +G  + KA ATSA     IA  
Sbjct: 132 TRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPYLNRHGVVMQKAVATSAACGLPIAVA 191

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             +  ++ G       P ++G+V+I A + I  +S +      K+++ +  + L   F+ 
Sbjct: 192 GAIGFMWFGAKEQISVPNTIGYVHIYAFIGISVMSFVTAKFGAKVAHALSPQMLKKCFAC 251

Query: 270 IM 271
           ++
Sbjct: 252 LL 253


>gi|192362299|ref|YP_001984115.1| hypothetical protein CJA_3663 [Cellvibrio japonicus Ueda107]
 gi|190688464|gb|ACE86142.1| putative membrane protein [Cellvibrio japonicus Ueda107]
          Length = 269

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 16/260 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGL----VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +IV+  + G ++GLF    G+    VMVPVL+  F          +H+A+ TS+  I PT
Sbjct: 5   LIVSLLILGAVTGLFAGLFGIGGGGVMVPVLTFLFLRQQFPADHVVHLALATSMATIVPT 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPIT------TVVTSLMISHVDKSFLNKAFAIFCL 135
           ++ S   H +H  +       W  VL IT      T   + + +++   FL   F+IF  
Sbjct: 65  ALASLRAHHQHNAV------VWPVVLRITPGVLVGTFAGTFLAAYLSVQFLAVFFSIFMA 118

Query: 136 LMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            +   M++  ++   R+ P N      G+  G +S  + +GGG  T   +++   ++  A
Sbjct: 119 FVAWQMIRNLQVSPARQLPGNLPLVAVGIAIGAISALVAIGGGTLTVPFLVWCNLALPVA 178

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TSA V   IA    L    +G G+  LP ++LG++   AVL++   S +  PL  +L+
Sbjct: 179 IGTSAAVGLPIAASGALGYWINGLGVADLPDYTLGYIYWPAVLVMACASFITAPLGARLA 238

Query: 256 YMIGKKYLTIGFSMIMFTTS 275
           + +    L  GF++++   S
Sbjct: 239 HRLPIPTLKKGFALLLVALS 258


>gi|326577826|gb|EGE27694.1| hypothetical protein EA1_01342 [Moraxella catarrhalis O35E]
          Length = 265

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 122/251 (48%), Gaps = 14/251 (5%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A  ++G  +GLFGVGGG+V+VP L       G+   I  HVA+GT+L  I  TS+ S   
Sbjct: 9   AGIIAGLCAGLFGVGGGMVIVPALIWILAAYGMPTDIVPHVAVGTALATIILTSISSMTA 68

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML---KRD 145
           H + G +  +I K+    L + ++  + + + +  + L        +L+ I ML    ++
Sbjct: 69  HHKRGGVRWEIFKNMSKGLVLGSLFGAWVATLISGAALQAILGAGAILVAIKMLFFPNQE 128

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
           RL  +   P  Y +   G+V G LS   G+GGG  T   +   G  + +A  TSA     
Sbjct: 129 RL--DIPPPPAYKQGFAGVVIGILSAIFGIGGGSLTVPYLSQNGVPMRQAVGTSAACGLP 186

Query: 206 IAFPALLVRIYSGW-----GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
           IA       I+ G       ++GL    +GFV+IGA + I  +S ++  +  KL++ +  
Sbjct: 187 IALAGAFGFIWFGHQIGTANIDGL----IGFVHIGAFITISILSFIMAKVGAKLAHALPA 242

Query: 261 KYLTIGFSMIM 271
           + L   F +++
Sbjct: 243 QTLKRAFGVLL 253


>gi|269103433|ref|ZP_06156130.1| hypothetical protein VDA_002859 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163331|gb|EEZ41827.1| hypothetical protein VDA_002859 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 268

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 100/204 (49%), Gaps = 1/204 (0%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           LV+VP L       GI  ++ MH+A+GTSL  I  TS  S   H R G ++  I+K    
Sbjct: 32  LVVVPALVWLLPHAGISSNLVMHIALGTSLASIVLTSGASARNHIRLGNVDYSIVKALAP 91

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL-YCERKFPDNYVKYIWGM 164
            + +     S +   V    L K FA   L + I ML   RL   E++ P        G 
Sbjct: 92  GVVLGGFGGSFIAEIVPTELLPKIFATIVLTLAIQMLLSMRLGRKEQRLPSTVACASSGA 151

Query: 165 VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
           V G +S   G+GGG  T   + ++G  + KA   ++   A+IA   ++  I +G G   L
Sbjct: 152 VIGVISSLAGIGGGSLTVPYLSWHGVEMRKAIGCASFAGAMIAIAGMIGFITAGVGSESL 211

Query: 225 PPWSLGFVNIGAVLIILPISILIT 248
           PP+SLG+V + A+L I+  S++ T
Sbjct: 212 PPYSLGYVYLPALLGIVTTSVITT 235


>gi|296112493|ref|YP_003626431.1| hypothetical protein MCR_0266 [Moraxella catarrhalis RH4]
 gi|295920187|gb|ADG60538.1| conserved hypothetical protein [Moraxella catarrhalis RH4]
 gi|326561532|gb|EGE11875.1| hypothetical protein E9G_02835 [Moraxella catarrhalis 7169]
 gi|326563597|gb|EGE13850.1| hypothetical protein E9O_08012 [Moraxella catarrhalis 12P80B1]
 gi|326564113|gb|EGE14351.1| hypothetical protein E9M_01921 [Moraxella catarrhalis 46P47B1]
 gi|326566510|gb|EGE16657.1| hypothetical protein E9K_01606 [Moraxella catarrhalis 103P14B1]
 gi|326568002|gb|EGE18094.1| hypothetical protein E9S_09548 [Moraxella catarrhalis BC7]
 gi|326570695|gb|EGE20729.1| hypothetical protein E9Q_00735 [Moraxella catarrhalis BC1]
 gi|326571251|gb|EGE21274.1| hypothetical protein E9U_02816 [Moraxella catarrhalis BC8]
 gi|326573067|gb|EGE23040.1| hypothetical protein E9W_07231 [Moraxella catarrhalis CO72]
 gi|326577235|gb|EGE27128.1| hypothetical protein E9Y_00562 [Moraxella catarrhalis 101P30B1]
          Length = 265

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 122/251 (48%), Gaps = 14/251 (5%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A  ++G  +GLFGVGGG+V+VP L       G+   I  HVA+GT+L  I  TS+ S   
Sbjct: 9   AGIIAGLCAGLFGVGGGMVIVPALIWILAAYGMPTDIVPHVAVGTALATIILTSISSMTA 68

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML---KRD 145
           H + G +  +I K+    L + ++  + + + +  + L        +L+ I ML    ++
Sbjct: 69  HHKRGGVRWEIFKNMSKGLVLGSLFGAWVATLISGAALQAILGAGAILVAIKMLFFPNQE 128

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
           RL  +   P  Y +   G+V G LS   G+GGG  T   +   G  + +A  TSA     
Sbjct: 129 RL--DIPPPPAYKQGFAGVVIGILSAIFGIGGGSLTVPYLSQNGVPMRQAVGTSAACGLP 186

Query: 206 IAFPALLVRIYSGW-----GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
           IA       I+ G       ++GL    +GFV+IGA + I  +S ++  +  KL++ +  
Sbjct: 187 IALAGAFGFIWFGHQVGTANIDGL----IGFVHIGAFITISILSFIMAKVGAKLAHALPA 242

Query: 261 KYLTIGFSMIM 271
           + L   F +++
Sbjct: 243 QTLKRAFGVLL 253


>gi|218529985|ref|YP_002420801.1| hypothetical protein Mchl_2026 [Methylobacterium chloromethanicum
           CM4]
 gi|218522288|gb|ACK82873.1| protein of unknown function DUF81 [Methylobacterium
           chloromethanicum CM4]
          Length = 270

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 119/247 (48%), Gaps = 5/247 (2%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D +V  I +  +   +SG +SGLFG+GG  V +P+       +GI  S+ MHVA  TS+ 
Sbjct: 2   DDLVLRIIIFAIVGLVSGFISGLFGIGGSTVRLPIFIYLLPWVGIGQSVLMHVASATSMA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           ++ P+++ +  +    G +++   K W+  L I   + ++++ H     L   FA++ LL
Sbjct: 62  LVIPSAITATRKQYALGNLDVGFYKTWVIGLFIGVALGAILLPHGSTEILQTLFAVYILL 121

Query: 137 MGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +G  +   R R     K P    +       G ++   G  GG  T  ++   G ++ KA
Sbjct: 122 VGFYIAFGRGRFSSRSKPPSGGKRIGIASFVGLIAALTGTSGGTLTTPILSTCGLALEKA 181

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            A ++    +    A +  I SGW    LP +SLG+V++   ++++P  ++  P      
Sbjct: 182 IAIASATGLVTGSIATIGGILSGWHAPDLPSYSLGYVDLVIFVVMMPTVMISAPWGVS-- 239

Query: 256 YMIGKKY 262
             +G+K+
Sbjct: 240 --VGEKF 244


>gi|218665563|ref|YP_002425252.1| hypothetical protein AFE_0764 [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|218517776|gb|ACK78362.1| membrane protein, putative [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 264

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 120/256 (46%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + L + +  ++G +SG+ GVGGG+V+VP+L   F ++ I   +  H+A+GTSL  I  
Sbjct: 2   NIVWLYLFSGAVAGIISGMLGVGGGIVLVPILIFIFGVLAIPVGMAAHMAIGTSLSTIIF 61

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS+ +     R   I+  +++       + ++++  +   +    L   F +F     + 
Sbjct: 62  TSMSAIHAQHRRKAIDWNLVRKLAPATILGSLISGYLAGLIPGQALKAIFGVFLAAAAVQ 121

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           M    R    R  P        G   G LS  LG+GGG  T     +    + +A ATS 
Sbjct: 122 MFFEWRPAPYRTLPGPLALLGIGTGIGALSAMLGIGGGTLTVPFFNWCNVDLRRAIATST 181

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +   +A    +  I SG+   GLP  S G+V++ A+L I   ++L  P    LSY +  
Sbjct: 182 TLGFGLAIFGTIGFIVSGFQRPGLPSASFGYVSLPAMLGIASTAVLFAPFGVHLSYRLPV 241

Query: 261 KYLTIGFSMIMFTTSF 276
           + L   F++++   +F
Sbjct: 242 RRLKRIFALLLLCLAF 257


>gi|198283044|ref|YP_002219365.1| hypothetical protein Lferr_0909 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|198247565|gb|ACH83158.1| protein of unknown function DUF81 [Acidithiobacillus ferrooxidans
           ATCC 53993]
          Length = 268

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 120/256 (46%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + L + +  ++G +SG+ GVGGG+V+VP+L   F ++ I   +  H+A+GTSL  I  
Sbjct: 6   NIVWLYLFSGAVAGIISGMLGVGGGIVLVPILIFIFGVLAIPVGMAAHMAIGTSLSTIIF 65

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS+ +     R   I+  +++       + ++++  +   +    L   F +F     + 
Sbjct: 66  TSMSAIHAQHRRKAIDWNLVRKLAPATILGSLISGYLAGLIPGQALKAIFGVFLAAAAVQ 125

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           M    R    R  P        G   G LS  LG+GGG  T     +    + +A ATS 
Sbjct: 126 MFFEWRPAPYRTLPGPLALLGIGTGIGALSAMLGIGGGTLTVPFFNWCNVDLRRAIATST 185

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +   +A    +  I SG+   GLP  S G+V++ A+L I   ++L  P    LSY +  
Sbjct: 186 TLGFGLAIFGTIGFIVSGFQRPGLPSASFGYVSLPAMLGIASTAVLFAPFGVHLSYRLPV 245

Query: 261 KYLTIGFSMIMFTTSF 276
           + L   F++++   +F
Sbjct: 246 RRLKRIFALLLLCLAF 261


>gi|145588817|ref|YP_001155414.1| hypothetical protein Pnuc_0632 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047223|gb|ABP33850.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 272

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 14/237 (5%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP +   F  +G +  + +H+A+ T +  I  T+  +   H +HG++      DW  V+ 
Sbjct: 32  VPFMILVFGHLGFNPEVIVHMAIATGMATILFTTSSAIWAHHKHGSV------DWKLVVA 85

Query: 109 ITT-------VVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI 161
           ++        V  S +   +  S+L+  FAIF +   I ML   +    R+ P     + 
Sbjct: 86  LSPGMIFGGLVGGSELFEALKTSWLSLFFAIFIVYSSIQMLLNKKPKPGRELPGPLGLFG 145

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
           +G   G L+  +G GG   T   ML+     + A A+S+G+   IA  A L  +Y  WG 
Sbjct: 146 FGTFAGALASLVGAGGAFITVPFMLWCNVKPHNAMASSSGLGFPIAAAATLGYMYGSWGN 205

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS-MIMFTTSFV 277
             LP  SLGFV + AV  I+ +SI   P+  K++  +    L   F  M++F  +F+
Sbjct: 206 PNLPVGSLGFVYLPAVACIVAVSIFTAPIGAKMARKLNVGQLKRVFGVMLLFLAAFM 262


>gi|294649510|ref|ZP_06726931.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|292824571|gb|EFF83353.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 266

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 116/249 (46%), Gaps = 2/249 (0%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GT L  I  TS+ S M H +
Sbjct: 12  IAGFTAGLFGVGGGLIIVPILYIVFTQLNYDPNVIMHIAVGTFLATIIVTSISSVMAHHK 71

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE- 150
            G +   + ++    L + + + + +   +    L     IF + M   M +      + 
Sbjct: 72  KGAVLWSVFRNLAPGLVLGSFLGAGIADLMSGQHLQLVIGIFAIWMAFKMFRGAHGVVDP 131

Query: 151 -RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
            R  P   ++   G   G  S   G+GGG  T   +  YG  + KA ATSA     IA  
Sbjct: 132 NRHLPSGPIQLAAGGGIGVASAIFGIGGGSLTVPFLNRYGVVMQKAVATSAACGLPIAVA 191

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             +  ++ G       P ++G+V+I A + I  +S +   +  ++++ +    L   F+ 
Sbjct: 192 GAVGFMWFGTKQQVEVPNTIGYVHIYAFIGISIMSFITAKVGARVAHRLSPAMLKKSFAG 251

Query: 270 IMFTTSFVF 278
           ++ T    F
Sbjct: 252 LLVTVGCYF 260


>gi|94501824|ref|ZP_01308336.1| predicted Permease [Oceanobacter sp. RED65]
 gi|94426045|gb|EAT11041.1| predicted Permease [Oceanobacter sp. RED65]
          Length = 263

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 115/247 (46%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G ++GLFG+GGG+++VPVL   F+++    +   H+A+ TSL  I  TS+ S   H +
Sbjct: 12  VAGLMAGLFGIGGGMIIVPVLVITFEILEFSPATLTHMAVATSLASIVFTSISSVRTHHQ 71

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
              ++  I+      + +  V+  L    +  S L     +  LLM   M    +    R
Sbjct: 72  KQAVDWPIVYKLSVGILLGAVLGVLSADALSGSGLQIVIGVSALLMAAQMGLGLKPKPTR 131

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
             P        G   G+ S   G+GGG  T   + +    + ++ AT+A     IA    
Sbjct: 132 SLPATTGMVTAGTGIGWASALFGIGGGSLTVPFLTWCNHPMQRSVATAAACGFPIALVGA 191

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           L  ++ GWG   LP  ++G+V   A+L I+  SI    L  KL++ +  + L   F++++
Sbjct: 192 LTNVFVGWGNEALPQNAVGYVYWPALLGIVITSIPCARLGAKLAHRLSAEKLKRLFAILL 251

Query: 272 FTTSFVF 278
              +  F
Sbjct: 252 VLVAIKF 258


>gi|187478637|ref|YP_786661.1| membrane protein [Bordetella avium 197N]
 gi|115423223|emb|CAJ49754.1| putative membrane protein [Bordetella avium 197N]
          Length = 267

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 9/229 (3%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L+  F   G+   + +HVA+ TS+  I  TS+ S   H++ GTIN KI    +  + 
Sbjct: 27  VPFLTMLFTWQGMPGDLVVHVAIATSMTSILFTSLSSMHAHQKKGTINWKI----VMTMA 82

Query: 109 ITTVVTSLM-----ISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG 163
              +V  L+      + +  ++L+  FA+F    G  ML+  +    R+ P        G
Sbjct: 83  PGIIVGGLLSGGAVFAAISTAWLSLFFAVFVAYSGWNMLRSKKPKPSRQMPGVAGTSAVG 142

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            V GF SG +G GGG  +   M++   +++ A ATSA +   IA    +  ++SG   N 
Sbjct: 143 AVIGFASGLVGAGGGFLSVPFMVWCNVALHSAVATSAALGFPIALANSIGYVFSGLAENV 202

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             P  LGF+    +L ++  S+L  P+  +++Y +    L   F+ ++F
Sbjct: 203 DQPGMLGFIYWPGLLALICTSVLTAPMGARMAYRLPVATLKKVFAGLLF 251


>gi|88811005|ref|ZP_01126261.1| predicted Permease [Nitrococcus mobilis Nb-231]
 gi|88791544|gb|EAR22655.1| predicted Permease [Nitrococcus mobilis Nb-231]
          Length = 266

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 1/231 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L   F    I +SI MH+A+G+SL  I  TS  S   H   G++  ++ K     L 
Sbjct: 30  VPALLFVFTAHDIPESIAMHLAVGSSLASIVATSASSVSAHAFFGSVLWRVFKPIAIGLL 89

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTG 167
           I  ++ + +   +    L + FA+F L+    M   R  L   R+ P  Y     G++ G
Sbjct: 90  IGALLGAQIAGLLSGLILKRIFAVFMLITAAQMAFARQPLASSRRLPGKYGLVGAGLIIG 149

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S  +G+GGG      + + G  + +A  TSA     IA       I +GW    LP  
Sbjct: 150 SVSSLVGIGGGSLMVPYLSWCGTQMRQAVGTSAAAGFPIAIAGTTGFILAGWSEPILPSA 209

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           + GFV   AV  I+  SIL+ P+  +L++++  K L   F++ +   S  F
Sbjct: 210 TTGFVYWPAVGGIVVASILVAPIGARLAHLLPAKVLKRIFAVFLLVVSAQF 260


>gi|84515495|ref|ZP_01002857.1| membrane protein [Loktanella vestfoldensis SKA53]
 gi|84510778|gb|EAQ07233.1| membrane protein [Loktanella vestfoldensis SKA53]
          Length = 272

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 11/212 (5%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P     F ++G D    M + + TSL  I  TSV S + H R G ++  ILK W   + I
Sbjct: 38  PAFFYVFSVLGFDSPQLMQICLATSLATIIVTSVRSLLAHHRKGAVDWAILKSWAPGIAI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V+  ++ + +    L   FA     + I +   +         P   ++ +   V GF
Sbjct: 98  GAVIGVMVAASLRSGTLQVVFATLAATVAIYITFGKSHWRLGPVMPGGILRAVLSPVIGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPA----LLVRIYSGWGLNGL 224
           LS  +G+GGG F   +M  +   I++A AT+AG   +IA P+    +L+ I         
Sbjct: 158 LSVLMGIGGGSFGVPIMTLFNVPIHRAVATAAGFGVIIATPSVAAFMLIDIAVA------ 211

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           PP+++G VN+ A ++++ ++++  P    L++
Sbjct: 212 PPFTIGAVNLVAFVLVIAMTLITAPWGAALAH 243


>gi|148654076|ref|YP_001281169.1| hypothetical protein PsycPRwf_2279 [Psychrobacter sp. PRwf-1]
 gi|148573160|gb|ABQ95219.1| protein of unknown function DUF81 [Psychrobacter sp. PRwf-1]
          Length = 273

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 116/260 (44%), Gaps = 10/260 (3%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + I  +I+ + L+G  +GLFGVGGG ++VP+L   F  MG D    MH+A+GTSL  I  
Sbjct: 2   ELIIFLIIGA-LAGFAAGLFGVGGGTIIVPLLFIVFTQMGYDPDTIMHLALGTSLATIIV 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS+ S M H + G++   + K+    + +     + +   +    L     IF L +   
Sbjct: 61  TSISSLMAHNKKGSVMWPVFKNLAPGMALGCFFGAGLAGQISGLHLQIIVGIFLLWVAYR 120

Query: 141 MLKRDRLYCERKFPDNYVKYIW---------GMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
           M    +        DN    I          G V G  S   G+GGG  T   +  YG  
Sbjct: 121 MFFGGKKAAASTTDDNTAPAILPSKPRQLAAGGVIGIASAIFGIGGGSLTVPYLTRYGVV 180

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           + KA  TSA     IA    L  +  G       P ++GFV+I A L I  +S     L 
Sbjct: 181 MQKAVGTSAACGLPIAIAGALGFMLFGMQQKIDVPNTIGFVHIYAFLGISVMSFFTAKLG 240

Query: 252 TKLSYMIGKKYLTIGFSMIM 271
            K+++++    L   F++++
Sbjct: 241 AKVAHILSPAMLKKCFAILL 260


>gi|124267499|ref|YP_001021503.1| putative integral membrane protein [Methylibium petroleiphilum PM1]
 gi|124260274|gb|ABM95268.1| putative integral membrane protein [Methylibium petroleiphilum PM1]
          Length = 282

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 8/230 (3%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P ++    L G    + + VA+ TSL  I  TS+ S   H   G +   I++     L  
Sbjct: 47  PFITLLLTLKGFPSDLIVKVAIATSLATICFTSLSSVRAHHARGAVRWDIVRR----LAP 102

Query: 110 TTVVTSLMISHVDKSF----LNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
             V+ SL+ + V K+     L   FA+F       ML+  +    R+ P     +  G V
Sbjct: 103 GIVLGSLLGAQVAKALPSALLAGLFALFVGFSATQMLRGGKPTPARQLPPAPGLFGVGGV 162

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            G +S  +G GG   +   M +    I+ A ATSA +   IA       I +GW L+GLP
Sbjct: 163 IGAVSALVGAGGAFMSVPFMTWCNVPIHNAVATSAALGVPIALAGTAGYIAAGWNLHGLP 222

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           P +LGF+ + A+L++   S++  PL  + ++ +  + L   F+++++  S
Sbjct: 223 PGTLGFLYLPALLVVSTASVMTAPLGARTAHALDVQQLRRVFALLLYAIS 272


>gi|73540356|ref|YP_294876.1| hypothetical protein Reut_A0650 [Ralstonia eutropha JMP134]
 gi|72117769|gb|AAZ60032.1| Protein of unknown function DUF81 [Ralstonia eutropha JMP134]
          Length = 270

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 106/226 (46%), Gaps = 7/226 (3%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+  F  +G      +H+A+ TS+G I  TS+ S   H + G +   I+   + + P 
Sbjct: 33  PFLTLLFTSLGFSGEAIVHMAIATSMGTILFTSLSSVRAHHKRGAVRWPIV---LALAPG 89

Query: 110 TTVVTSLMISHV----DKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
             +   +    V      S+L+ AFA F     + ML+  +    R+ P        G  
Sbjct: 90  ILLGGMIGGGKVFAALKTSWLSLAFACFVGFSALQMLRSRKPAPSRQLPGVPGMVGAGSA 149

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            GFLS  +G GG   +   M +    I+ A ATSA +   IA  +++  I+SGW   GLP
Sbjct: 150 IGFLSSLVGAGGAFVSVPFMTWCNVPIHNAVATSAALGFPIAVASVVGYIWSGWQQPGLP 209

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
             SLG++ + A+L I   S+L  PL  + ++ +    L   F++++
Sbjct: 210 DGSLGYIYLPALLAIAVTSVLTAPLGARTAHRMDVGQLRKAFAVLL 255


>gi|240138287|ref|YP_002962759.1| hypothetical protein MexAM1_META1p1633 [Methylobacterium extorquens
           AM1]
 gi|240008256|gb|ACS39482.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
          Length = 270

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 119/247 (48%), Gaps = 5/247 (2%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D +V  I +  +   +SG +SGLFG+GG  V +P+       +GI+ S+ MHVA  TS+ 
Sbjct: 2   DDLVLRIIIFAIVGLVSGFISGLFGIGGSTVRLPIFIYLLPWVGIEQSVLMHVASATSMA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           ++ P+++ +  +    G +++   K W+  L I   + ++++ H     L   FA++ LL
Sbjct: 62  LVIPSAITATRKQYALGNLDVGFYKTWVIGLFIGVALGAILLPHGSTEILQTLFAVYILL 121

Query: 137 MGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +G  +   R R     K P    +       G ++   G  GG  T  ++   G ++ KA
Sbjct: 122 VGFYIAFGRGRFSSRSKPPSGGKRIGIASFVGLVAALTGTSGGTLTTPILSTCGLALEKA 181

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            A ++    +    A +  I SGW     P +SLG+V++   ++++P  ++  P      
Sbjct: 182 IAIASATGLVTGSIATIGGILSGWHAPDRPSYSLGYVDLVIFVVMMPTVMISAPWGVS-- 239

Query: 256 YMIGKKY 262
             +G+K+
Sbjct: 240 --VGEKF 244


>gi|15601946|ref|NP_245018.1| hypothetical protein PM0081 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720290|gb|AAK02165.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 264

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 128/250 (51%), Gaps = 3/250 (1%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAF-QLMGIDDSICMHVAMGTSLGVIAPT 81
           ICL + A   +G L+GLFG+GGGLV+VPVL     + +G+ +++ M  A+GTS   I  T
Sbjct: 7   ICLAVGA--FAGFLAGLFGIGGGLVIVPVLVYLMPKYVGVPEAMVMACALGTSFATIVIT 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              S   H + G +   ++K    V+ ITT ++   IS++ K    + FA   + + I M
Sbjct: 65  GFSSAQRHHKLGNVVWDVVKVLAPVIMITTFISGFFISYLPKDISARLFACLVIYLAIKM 124

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
               +     K        I G++ G  S A G+GGG F    +   G  + KA  +SA 
Sbjct: 125 FLSVKPKPVTKALTKASTIIAGILIGMASSAAGIGGGGFIVPFLNSRGIDMKKAIGSSAV 184

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             +L+A   +L  + +GW + GLP +S+G+V + A++ I   SI  + +   ++ ++   
Sbjct: 185 CGSLLAIAGMLSFMIAGWKVEGLPEYSMGYVYLPALVGITLTSIFTSKIGATVTSILPVP 244

Query: 262 YLTIGFSMIM 271
            L   F++++
Sbjct: 245 ILKKAFALML 254


>gi|113868931|ref|YP_727420.1| permease [Ralstonia eutropha H16]
 gi|113527707|emb|CAJ94052.1| predicted permease [Ralstonia eutropha H16]
          Length = 274

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 13/229 (5%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+  F  +G  D   +H+A+ TS+G I  TS+ S   H + G +       W  VL +
Sbjct: 37  PFLTLLFTSLGFADEAIVHMAIATSMGTILFTSLSSVRAHHQRGAVR------WPIVLAL 90

Query: 110 TT-VVTSLMI------SHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW 162
              +V   MI      + +  S+L+ AFA F     + ML+  R    R+ P        
Sbjct: 91  APGIVLGGMIGGGKVFAALKTSWLSLAFAAFVGFSALQMLRNRRPKPGRQLPGFAGMAGA 150

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           G V GFLS  +G GG   +   M +    I+ A ATSA +   IA  ++   ++SGW   
Sbjct: 151 GGVIGFLSSLVGAGGAFVSVPFMTWCNVPIHNAVATSAALGFPIAAASVAGYVWSGWQTP 210

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           GLP  SLG++ + A+L+I   S++  PL  + ++ +    L   F+ ++
Sbjct: 211 GLPAGSLGYLYLPALLVIAAASVMTAPLGARTAHRMDVSQLRKVFAALL 259


>gi|28897296|ref|NP_796901.1| hypothetical protein VP0522 [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363901|ref|ZP_05776649.1| conserved domain protein [Vibrio parahaemolyticus K5030]
 gi|260876261|ref|ZP_05888616.1| conserved domain protein [Vibrio parahaemolyticus AN-5034]
 gi|260897578|ref|ZP_05906074.1| conserved domain protein [Vibrio parahaemolyticus Peru-466]
 gi|260901101|ref|ZP_05909496.1| conserved domain protein [Vibrio parahaemolyticus AQ4037]
 gi|28805505|dbj|BAC58785.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308084913|gb|EFO34608.1| conserved domain protein [Vibrio parahaemolyticus Peru-466]
 gi|308092960|gb|EFO42655.1| conserved domain protein [Vibrio parahaemolyticus AN-5034]
 gi|308107461|gb|EFO45001.1| conserved domain protein [Vibrio parahaemolyticus AQ4037]
 gi|308112973|gb|EFO50513.1| conserved domain protein [Vibrio parahaemolyticus K5030]
          Length = 263

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 104/207 (50%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L       GI   + MH+A+ TSL  I  TS  S + H + G ++M ++K  +  + 
Sbjct: 32  VPALLFLLPWAGISPEMSMHMALATSLASIIVTSGSSALNHLKLGNVDMFVVKWLMPGVV 91

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           I   V + +   +   +L K F +  L + + M +  ++  E+  P + V  ++G   G 
Sbjct: 92  IGGFVGANIAEWIPTHYLPKVFGVIVLCLAVQMFRSIKVKSEKPMPSSPVTMMYGTGIGV 151

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S   G+GGG  +   +  +G  + KA  +S+    +IA   ++  I  G+ + GLP +S
Sbjct: 152 VSSLAGIGGGSLSVPFLNKHGVEMRKAVGSSSVCGCIIAISGMIGFILHGYKVEGLPAYS 211

Query: 229 LGFVNIGAVLIILPISILITPLATKLS 255
           +G+V + A+L I   S+L T +  KL+
Sbjct: 212 IGYVYLPALLAIAMTSMLTTKVGAKLA 238


>gi|119946559|ref|YP_944239.1| hypothetical protein Ping_2938 [Psychromonas ingrahamii 37]
 gi|119865163|gb|ABM04640.1| hypothetical protein DUF81 [Psychromonas ingrahamii 37]
          Length = 272

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 107/220 (48%), Gaps = 1/220 (0%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
           FQ++G+     M +A  TSL  +  TS+ S   H + G +++ +LK     + +  +  S
Sbjct: 44  FQVIGVSPETAMPIATATSLATMVFTSLSSIRAHIKRGNVDLPLLKILAPFVIMGVLAGS 103

Query: 116 LMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALG 174
           ++++ ++  +L+  F    ++  + ++L+        K P    K +     GFLS  +G
Sbjct: 104 VIVTQINGLWLSGLFGFIAIIAALNMILRAGAKPLATKLPGTPGKGVMAGTIGFLSVMVG 163

Query: 175 VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           +GGG  T   +  +   ++KA  T+A V  LIAFP  L  +  G      PP + G VN+
Sbjct: 164 IGGGTLTVPSLTAFSYPMHKAVGTAAAVGFLIAFPGALSLLIIGESAADAPPMTYGLVNL 223

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            A   ++P+++   P+  ++S  +  K L   F++ +  T
Sbjct: 224 LACFFLIPLTVFFAPIGARVSSYLDAKLLKRIFAISLIIT 263


>gi|260433273|ref|ZP_05787244.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417101|gb|EEX10360.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 274

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 108/223 (48%), Gaps = 1/223 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P     FQ +G      M + + TSL  I  TSV S + H + G ++ +IL+ W   + +
Sbjct: 38  PAFFYTFQTLGYGGPQLMQMCLATSLATIIVTSVRSVLSHNKKGAVDWEILRGWGPGIAL 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
             +   ++ S +    L   F I  + +G  L   +         P    + +   + GF
Sbjct: 98  GALAGVMVASALRTEALQALFGILGMGIGAYLGFGKSEWRLGDAMPGGLRRVLISPMVGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  Y   I++A AT+AG   +IA P+++  ++     +  PP++
Sbjct: 158 LSVLMGIGGGSFGVPLMSLYNTPIHRAVATAAGFGVIIAVPSVIGFLFLPIAPDYRPPFT 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +G VN+ A  +++ ++++  P   KL++ +  K L   F++ +
Sbjct: 218 IGAVNLVAFGVVVAMTMITAPWGVKLAHAMDPKPLKRVFAVFL 260


>gi|224823409|ref|ZP_03696518.1| protein of unknown function DUF81 [Lutiella nitroferrum 2002]
 gi|224603864|gb|EEG10038.1| protein of unknown function DUF81 [Lutiella nitroferrum 2002]
          Length = 268

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
            H+A+GTSL V+  TS  S + H R G +N +I++     +   T + SL+   +    L
Sbjct: 51  QHLAVGTSLAVMVFTSFSSVLAHHRKGAVNWRIVRGMAPAIVAGTFLGSLVAGLIPGHVL 110

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
              F ++  L G+ +    +    R  P    +   G   G +S  +G+GGG  +   M 
Sbjct: 111 RWFFVVYAYLAGLQLFFGAKPAGSRDMPGLLGQCGAGGAIGMISSWVGIGGGSMSVPFMN 170

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +    ++ A ATSA +   IA    +  + SGWG  GLP  SLGFV + A L ++ +++L
Sbjct: 171 WCNVPVHTAIATSAALGWPIAVSGAIGYLVSGWGAPGLPWGSLGFVYLPATLALMLMTVL 230

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIM 271
             PL  ++++ +    L   F+++M
Sbjct: 231 CAPLGARMAHALPVAGLKRAFAVLM 255


>gi|239906522|ref|YP_002953263.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
 gi|239796388|dbj|BAH75377.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
          Length = 267

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 97/207 (46%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L   F   G    + M +A+GTSL  I  TSV S   H R G +   I+K     + +
Sbjct: 34  PALFWFFTAQGFSQELIMQMALGTSLAAIMFTSVSSLRAHHRRGAVVWPIVKAITPGILV 93

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T + S + + +   FL   F  F   + I ML   +    R+ P     +  G+  G +
Sbjct: 94  GTFLGSCVAAKLSTGFLKGFFVAFLYYVSIQMLLNIKPKAHRQIPGKLGMFGAGLAIGAV 153

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   M++   +++ A  TSA +   IA    +  I +G+G   LP  S 
Sbjct: 154 SSLVGIGGGTMSVPFMVWCNVAMHTAVGTSAAIGFPIALAGTIGYIINGFGAPNLPSLSF 213

Query: 230 GFVNIGAVLIILPISILITPLATKLSY 256
           G++ + A++ +  +S+L  P   KL++
Sbjct: 214 GYIYLPALVGVAAVSVLTAPYGAKLAH 240


>gi|83648499|ref|YP_436934.1| permease [Hahella chejuensis KCTC 2396]
 gi|83636542|gb|ABC32509.1| predicted Permease [Hahella chejuensis KCTC 2396]
          Length = 266

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 105/224 (46%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L  +F+L G+  S+  H+A+GTSL  I  TS+ S   H +   +N ++ +     L 
Sbjct: 29  VPALIFSFELQGVAPSVATHLAVGTSLATIIFTSINSIRAHHQKQGVNWRVFRPMAVGLM 88

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           +  V+ +   S +  + L     IF + +G+ M    +    R  P + V    G   G+
Sbjct: 89  VGAVLGAQTASLMPAAQLKLVIGIFAITIGVQMALALKPKPHRSLPGSGVLVGVGGGIGW 148

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
            S   G+GGG  +   + +    + +A  TSA     IA    +  I+ GWG   LP +S
Sbjct: 149 ASAIFGIGGGSLSVPYLTWCNVRMQQAVGTSAACGLPIALMGAITNIWEGWGEAALPEYS 208

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           LGF+ + A+  I   S+    L  KL++ +    L   FS+++F
Sbjct: 209 LGFIYLPALAGIAITSMPFASLGAKLAHRLPGDVLKRIFSVLLF 252


>gi|93005178|ref|YP_579615.1| hypothetical protein Pcryo_0347 [Psychrobacter cryohalolentis K5]
 gi|92392856|gb|ABE74131.1| protein of unknown function DUF81 [Psychrobacter cryohalolentis K5]
          Length = 268

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 2/251 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y+  +I  +F +G  +GLFGVGGG+++VP L   F        +  H+A+GTSL  I  T
Sbjct: 4   YVWFVIAGAF-AGVSAGLFGVGGGMIIVPALVWIFAAYNFPPEVVTHLAIGTSLATIVVT 62

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H + G +  ++ +     L I ++V + +   +D   L     +  LL+ + M
Sbjct: 63  SISSLTAHNKRGGVRWEVWRKMALGLVIGSLVGAGIADMIDGKVLQAIIGVGALLVALKM 122

Query: 142 -LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
               ++    +  P   V++  G   G  S   G+GGG  T   + + G  + ++  TSA
Sbjct: 123 FFFSNKEQLGKPLPSVGVQFGAGTGIGMASSIFGIGGGSLTVPFLNWAGLPMKQSVGTSA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA        + G  +  +P  ++GFV+I   L I   S  +  +  KL++++  
Sbjct: 183 ACGLPIALAGAAGFAWFGQDVVNMPEGTIGFVHITGFLCISVASFAMAKVGAKLAHILPA 242

Query: 261 KYLTIGFSMIM 271
             L   F +++
Sbjct: 243 LTLKRAFGILL 253


>gi|328472060|gb|EGF42937.1| hypothetical protein VP10329_02865 [Vibrio parahaemolyticus 10329]
          Length = 263

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 104/207 (50%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L       GI   + MH+A+ TSL  I  TS  S + H + G ++M ++K  +  + 
Sbjct: 32  VPALLFLLPWAGISPEMSMHMALATSLASIIVTSGSSALNHLKLGNVDMFVVKWLMPGVV 91

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           I   V + +   +   +L K F +  L + + M +  ++  E+  P + V  ++G   G 
Sbjct: 92  IGGFVGANIAEWIPTHYLPKVFGVIVLCLAVQMFRSIKVKSEKPMPSSPVTMMYGTGIGV 151

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S   G+GGG  +   +  +G  + KA  +S+    +IA   ++  I  G+ + GLP +S
Sbjct: 152 VSSLAGIGGGSLSVPFLNKHGVEMRKAVGSSSVCGCIIAISGMVGFILHGYKVEGLPAYS 211

Query: 229 LGFVNIGAVLIILPISILITPLATKLS 255
           +G+V + A+L I   S+L T +  KL+
Sbjct: 212 VGYVYLPALLAIAMTSMLTTKVGAKLA 238


>gi|303256766|ref|ZP_07342780.1| putative membrane protein [Burkholderiales bacterium 1_1_47]
 gi|302860257|gb|EFL83334.1| putative membrane protein [Burkholderiales bacterium 1_1_47]
          Length = 271

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 2/213 (0%)

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
           I     +HVA+ TSL  IA TS+ S   H + G +   ++      + +  VV + +   
Sbjct: 44  IPHEHIVHVAIATSLATIAFTSLSSVRAHHKRGAVLWNVVASVAPGILVGAVVGAQIAGW 103

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
           +   +L+  FA F       M        +R  P    K+  G+  G LS  +G GGG  
Sbjct: 104 LPTFWLSLIFAAFVGFSAFKMFLNKSPRPDRNLPGTIGKFFMGIAIGILSALVGAGGGFI 163

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW--SLGFVNIGAVL 238
           +   M++    +  A ATSA     IA    +  I SGW ++GLPPW   LG++ I A+ 
Sbjct: 164 SVPWMIWCNVKMQNAVATSAAFGFPIALFGTIGYIISGWNVSGLPPWPIDLGYICIPALF 223

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            +   S+L  PL  K+++ I  K L   F+ ++
Sbjct: 224 SVAITSVLFAPLGAKVAHSIDTKPLKKIFACLL 256


>gi|262280099|ref|ZP_06057884.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262260450|gb|EEY79183.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 267

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 117/242 (48%), Gaps = 2/242 (0%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS  S   H +
Sbjct: 12  IAGFTAGLFGVGGGLIIVPILYVVFTQLHYDPAVIMHIAVGTSLATIIVTSFSSVSAHHK 71

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE- 150
            G +   + ++    L I + + + +   +    L     IF + M   M K   +  + 
Sbjct: 72  KGAVLWPVFRNLAPGLIIGSFLGAGIADLMSGQHLQLLIGIFAVSMAYRMFKGAHVVVDP 131

Query: 151 -RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
            R+ P   ++ + G   G  S   G+GGG  T   +  +G  + KA ATSA     IA  
Sbjct: 132 TRQLPSASMQVMAGGGIGVASAIFGIGGGSLTVPYLNRHGVVMQKAVATSAACGLPIAVA 191

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             +  ++ G   +   P ++G+V+I A + I  +S +      K+++ +  + L   F+ 
Sbjct: 192 GAIGFMWFGAKEHISVPNTIGYVHIYAFIGISVMSFITAKFGAKVAHALSPQMLKKCFAC 251

Query: 270 IM 271
           ++
Sbjct: 252 LL 253


>gi|261381166|ref|ZP_05985739.1| putative membrane protein [Neisseria subflava NJ9703]
 gi|284795980|gb|EFC51327.1| putative membrane protein [Neisseria subflava NJ9703]
          Length = 269

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 124/259 (47%), Gaps = 15/259 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I  ++     +G ++GLFGVGGG ++VPV+  A QL GI       H+A+GTS  V+ 
Sbjct: 5   DIILALLAVGSAAGFIAGLFGVGGGTLIVPVVLWALQLQGIGSHPYAQHLAIGTSFAVMV 64

Query: 80  PTSVMS-FMEHRRHGTINMKILKDWIFVLPITT-VVTSLMISHVDKSF-----LNKAFAI 132
            T+  S + +H++H         DW  V  +T  ++  +++  V   +     L   F  
Sbjct: 65  FTTFSSMYAQHKKHAI-------DWATVRRMTPGMILGVLLGAVTAKYMPTLALQVFFIA 117

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           F   + +  L+  +    R  P  +     G + G  S  +G+GGG  +   +L+     
Sbjct: 118 FLAFIAVKTLRDSKPKPSRTLPALHGLTAVGTLFGAASSWVGIGGGSLSVPFLLYCNFPA 177

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           ++A  TS+G++  IA    +    +G  +  LP  + GF+ + AV I+   +IL  PL  
Sbjct: 178 HRAIGTSSGLAWPIAIAGTIGYFANGLHVAHLPEGAAGFIYLPAVAILSVATILFAPLGV 237

Query: 253 KLSYMIGKKYLTIGFSMIM 271
           K ++ +  + L I F +++
Sbjct: 238 KTAHKLPARKLKIAFGIML 256


>gi|332975644|gb|EGK12533.1| protein of hypothetical function DUF81 [Psychrobacter sp.
           1501(2011)]
          Length = 273

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 117/260 (45%), Gaps = 10/260 (3%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + I  +I+ + L+G  +GLFGVGGG ++VP+L   F  MG D +  MH+A+GTSL  I  
Sbjct: 2   ELIIFLIIGA-LAGFAAGLFGVGGGTIIVPLLFIVFTQMGYDPNTIMHLALGTSLATIIV 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS+ S M H + G++   + K+    + +     + +   +    L     IF L +   
Sbjct: 61  TSISSLMAHNKKGSVMWPVFKNLAPGMALGCFFGAGLAGQISGLHLQIIVGIFLLWVAYR 120

Query: 141 MLKRDRLYCER---------KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
           M   ++                P    +   G V G  S   G+GGG  T   +  YG  
Sbjct: 121 MFFGNKKPATSATNTSNASVALPSTPKQLAAGGVIGIASAIFGIGGGSLTVPYLTRYGVV 180

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           + KA  TSA     IA    L  +  G       P ++GFV+I A L I  +S     L 
Sbjct: 181 MQKAVGTSAACGLPIAVAGALGFMLFGMQQKVDVPNTIGFVHIYAFLGISVMSFFTAKLG 240

Query: 252 TKLSYMIGKKYLTIGFSMIM 271
            K+++++    L   F++++
Sbjct: 241 AKVAHILSPAMLKKCFAILL 260


>gi|261365443|ref|ZP_05978326.1| putative membrane protein [Neisseria mucosa ATCC 25996]
 gi|288566111|gb|EFC87671.1| putative membrane protein [Neisseria mucosa ATCC 25996]
          Length = 269

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGID-DSICMHVAMGTSLGVIA 79
           D I  ++     +G ++GLFGVGGG ++VPV+    QL GI+      H+A+GTS  V+ 
Sbjct: 5   DIIFSLLAVGSAAGFIAGLFGVGGGTLIVPVVLWTLQLQGINGHPYAQHLAIGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S     +   I+ + ++     +    ++ ++   ++    L   F  F  L+ +
Sbjct: 65  FTTFSSMYAQHKKRAIDWQTVRRMTPSMIFGVLIGAVTAKYMPTRALQIFFIAFLTLIAL 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   +    R  P        G + G  S  +G+GGG  +   +++     ++A  TS
Sbjct: 125 KTLADSKPKASRHLPALPGLSAVGTLFGAASSWVGIGGGSLSVPFLMYCNFPAHRAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +GW +  LP  S GF+ + AV I+   +++  PL  K ++ + 
Sbjct: 185 SGLAWPIALAGTIGYLVTGWNIPNLPHGSGGFLYLPAVAILSIATMIFAPLGVKTAHKLP 244

Query: 260 KKYLTIGFSMIM 271
            + L I F +++
Sbjct: 245 ARQLKISFGIML 256


>gi|78486538|ref|YP_392463.1| hypothetical protein Tcr_2201 [Thiomicrospira crunogena XCL-2]
 gi|78364824|gb|ABB42789.1| Conserved hypothetical protein with DUF81 [Thiomicrospira crunogena
           XCL-2]
          Length = 262

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 118/244 (48%), Gaps = 5/244 (2%)

Query: 32  LSGTLSGLFGVGGGLVM----VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           L+G ++G F    G+      VPVL+  F L  I+    +H+A+GTS+  I  TS+ S  
Sbjct: 10  LTGIIAGFFAGLLGIGGGLIIVPVLTSVF-LYFIEGPHLVHLAIGTSMATILITSLASVK 68

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            H RH  +   I+K     + I  ++   +  ++    L K FA+  L + I ML   + 
Sbjct: 69  AHHRHDAVRWDIVKTLTPGIFIGGILGGWISQYISAPMLAKIFAVIELGIAIKMLLDLQP 128

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
              R+ P    + + G + G +S  +G+GGG      M+++  S+ +A ATSA  S  IA
Sbjct: 129 NPHREMPGIAGRSVAGTIIGSISALVGIGGGALNTPYMVWHNVSMRQAIATSAACSLPIA 188

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
               L  +  GW +  LP  ++G++   A L I+  S    P+   +++ +  K L   F
Sbjct: 189 AAGTLGFLIGGWNIPNLPDHAIGYIYWPAFLGIVIASFFTAPIGAAMTHKLPVKTLKRIF 248

Query: 268 SMIM 271
           ++++
Sbjct: 249 AILL 252


>gi|332977620|gb|EGK14388.1| protein of hypothetical function DUF81 [Psychrobacter sp.
           1501(2011)]
          Length = 270

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 1/250 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   +VA   +G  +GLFG+GGG+++VP L   F   G    I  H+A+GTSL  I  TS
Sbjct: 3   IVWFLVAGAFAGLCAGLFGIGGGMIIVPALVWIFTAYGYSPEIIAHMAVGTSLATIVVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H + G +   + K+    L + ++V + +   +    L        LL+   ML
Sbjct: 63  ISSLTAHNKRGGVRWDVWKNMAIGLVVGSLVGAAIADQIHGLMLQALIGGGALLVAFKML 122

Query: 143 -KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
              ++    +  P   V+   G   G  S   G+GGG  T   + + G  + +A  TSA 
Sbjct: 123 FLSNKENLGKPLPSAPVQVAAGSGIGMASSIFGIGGGSLTVPFLTWAGLPMRQAVGTSAA 182

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
               IA        + G  ++ LP  ++GFV++   + I   S +   L  K ++ +   
Sbjct: 183 CGLPIALAGAAGFAWFGQNVSELPEGAVGFVHVIGFICISIASFITAKLGAKWAHQLPAA 242

Query: 262 YLTIGFSMIM 271
            L   F +++
Sbjct: 243 TLKKAFGVLL 252


>gi|308445775|ref|XP_003087015.1| hypothetical protein CRE_13893 [Caenorhabditis remanei]
 gi|308269488|gb|EFP13441.1| hypothetical protein CRE_13893 [Caenorhabditis remanei]
          Length = 267

 Score = 82.0 bits (201), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 115/249 (46%), Gaps = 2/249 (0%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G  +GLFGVGGGL++VP+L   F  MG D S+ MH+A+GTSL  I  TS+ S   H +
Sbjct: 12  IAGFAAGLFGVGGGLIIVPILYVVFTKMGYDPSVIMHMALGTSLATIIVTSISSVTAHHK 71

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE- 150
            G +   + K+    L I + + + +   +    L      F + +   M K   +  + 
Sbjct: 72  KGAVLWNVFKNLAPGLVIGSFIGAGIADILSGQHLQLIIGAFAIWVAFKMFKGANVKVDE 131

Query: 151 -RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
            ++ P   ++ + G   G  S   G+GGG  T   +   G  + KA ATSA     IA  
Sbjct: 132 SKQLPTAPMQMLAGGGIGVASAIFGIGGGSLTVPYLNKNGVVMQKAVATSAACGLPIAIA 191

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             L  ++ G         S+G+V+I A + I  +S +      K+++ +    L   F+ 
Sbjct: 192 GALGFMFFGAQEPTEIKNSIGYVHIYAFIGISVMSFITAKFGAKVAHALSPAMLKKCFAC 251

Query: 270 IMFTTSFVF 278
           ++      F
Sbjct: 252 LLTVVGLYF 260


>gi|330999115|ref|ZP_08322836.1| hypothetical protein HMPREF9439_00458 [Parasutterella
           excrementihominis YIT 11859]
 gi|329575504|gb|EGG57043.1| hypothetical protein HMPREF9439_00458 [Parasutterella
           excrementihominis YIT 11859]
          Length = 263

 Score = 82.0 bits (201), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 2/213 (0%)

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
           I     +HVA+ TSL  IA TS+ S   H + G +   ++      + +  VV + +   
Sbjct: 36  IPHEHIVHVAIATSLATIAFTSLSSVRAHHKRGAVLWNVVASVAPGILVGAVVGAQIAGW 95

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
           +   +L+  FA F       M        +R  P    K+  G+  G L+  +G GGG  
Sbjct: 96  LPTFWLSLIFAAFVGFSAFKMFLNKSPRPDRNLPGTIGKFFMGIAIGILAALVGAGGGFI 155

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW--SLGFVNIGAVL 238
           +   M++    +  A ATSA     IA    +  I SGW ++GLPPW   LG++ I A+ 
Sbjct: 156 SVPWMIWCNVKMQNAVATSAAFGFPIALFGTIGYIISGWNVSGLPPWPIDLGYICIPALF 215

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            +   S+L  PL  K+++ I  K L   F+ ++
Sbjct: 216 SVAITSVLFAPLGAKVAHSIDTKPLKKIFACLL 248


>gi|325958271|ref|YP_004289737.1| hypothetical protein Metbo_0513 [Methanobacterium sp. AL-21]
 gi|325329703|gb|ADZ08765.1| protein of unknown function DUF81 [Methanobacterium sp. AL-21]
          Length = 268

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 24/243 (9%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G  SGL GVGGG +MVPV       +G+D +I + VA GTSL VI PT++   + H+R  
Sbjct: 18  GFASGLLGVGGGFIMVPVQFFLLTSIGVDPTIAIRVAFGTSLAVILPTAISGTIGHKRR- 76

Query: 94  TINMKILKDWIFVLPITTVVTSL----MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
             N  +++  I  + I+ V+ S     + +++   +L  AF +   L  + ML       
Sbjct: 77  --NAVLVRPTIL-MGISGVLASFAGGTLATNIPGDYLKLAFGVLVFLAAVWML------- 126

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALG---------VGGGIFTNLLMLFYGASIYKATATSA 200
             K+PDN  K   G++   L G             GG +   +L+     ++  A  TS 
Sbjct: 127 VAKYPDNDTKPKEGVIPYILIGLFAGSLSGLLGIGGGIVLVPILVFLMNFNLRTAIGTST 186

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            V    A   ++  I +G  + G+PP+S+G++N+  ++++  IS  +  L  ++S+ I +
Sbjct: 187 AVLVFTAIGGVVSYIINGINVPGIPPYSIGYINLVQLVLLACISTPVAQLGVRVSHNIPE 246

Query: 261 KYL 263
           K L
Sbjct: 247 KQL 249


>gi|269468135|gb|EEZ79842.1| predicted permease [uncultured SUP05 cluster bacterium]
          Length = 260

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 126/252 (50%), Gaps = 3/252 (1%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V+ + L+ + +F SG ++GL GVGGGL+MVP L     +  +  ++ MH A+GT+L  I 
Sbjct: 2   VEIVSLLFLGAF-SGFIAGLLGVGGGLIMVPALLY-LLVDSVSQTVLMHTAVGTALAAIV 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ S   H +HG I+ +  K     + +     +L+   +   F+   FA+F   + I
Sbjct: 60  FTSISSVRAHHQHGAIHWQYFKKLTPTILLGAFSGALLTKAMSFDFMRIFFALFEFSVAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
           +M               +V  I G V G +S  +G+GGG  T   + +   +I  A ATS
Sbjct: 120 IMYFGISSSSHVDSLSKWVWRITGYVIGLVSAIVGIGGGTMTTPFLTYNNVNIKNAIATS 179

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A V   IA    L  I +GW +       LGF++  A++ I+ +S+L  PL  K+++ + 
Sbjct: 180 AAVGMPIAVAGALGFIVAGWNVESATS-GLGFIHTEALISIVVMSVLFAPLGAKVAHSVD 238

Query: 260 KKYLTIGFSMIM 271
            K L   F++ +
Sbjct: 239 GKKLKKFFALFL 250


>gi|254560829|ref|YP_003067924.1| hypothetical protein METDI2381 [Methylobacterium extorquens DM4]
 gi|254268107|emb|CAX23983.1| hypothetical protein; putative membrane protein [Methylobacterium
           extorquens DM4]
          Length = 270

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 119/247 (48%), Gaps = 5/247 (2%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D +V  I +  +   +SG +SGLFG+GG  V +P+       +GI  S+ MHVA  TS+ 
Sbjct: 2   DDLVLRIIIFAIVGLVSGFISGLFGIGGSTVRLPIFIYLLPWVGIGQSVLMHVASATSMA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           ++ P+++ +  +    G +++   K W+  L I   + ++++ H     L   FA++ LL
Sbjct: 62  LVIPSAITATRKQYALGNLDVGFYKTWVIGLFIGVALGAILLPHGSTEILQTLFAVYILL 121

Query: 137 MGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +G  +   R R     + P +  +       G ++   G  GG  T  ++   G ++ KA
Sbjct: 122 VGFYIAFGRGRFSSRSEPPSDGKRIGIASFVGLVAALTGTSGGTLTTPILSTCGLALEKA 181

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            A ++    +    A +  I SGW     P +SLG+V++   ++++P  ++  P      
Sbjct: 182 IAIASATGLVTGSIATIGGILSGWHAPDRPSYSLGYVDLVIFVVMMPTVMISAPWGVS-- 239

Query: 256 YMIGKKY 262
             +G+K+
Sbjct: 240 --VGEKF 244


>gi|91227680|ref|ZP_01261957.1| hypothetical protein V12G01_13384 [Vibrio alginolyticus 12G01]
 gi|91188459|gb|EAS74753.1| hypothetical protein V12G01_13384 [Vibrio alginolyticus 12G01]
          Length = 263

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 100/196 (51%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           GI   + MH+A+ TSL  I  TS  S M H + G ++M ++K  +  + I   V + +  
Sbjct: 43  GISPEMSMHMALATSLASIIVTSGSSAMNHLKLGNVDMFVVKWLMPGVVIGGFVGANIAE 102

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +   +L K F +  L + + M +  ++   +  P + V  ++G   G +S   G+GGG 
Sbjct: 103 WIPTHYLPKVFGVIVLCLSVQMFRSIKVTSSKPMPSSPVTVVYGTGIGVVSSLAGIGGGS 162

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            +   +  +G  + KA  +S+    +IA   ++  I  G+ + GLP +S+G+V + A+L 
Sbjct: 163 LSVPFLNKHGIEMRKAVGSSSVCGCVIAISGMIGFILHGYKVEGLPSYSIGYVYLPALLA 222

Query: 240 ILPISILITPLATKLS 255
           I   S+L T +  KL+
Sbjct: 223 IAMASMLTTKVGAKLA 238


>gi|332289793|ref|YP_004420645.1| Sulfite exporter TauE/SafE [Gallibacterium anatis UMN179]
 gi|330432689|gb|AEC17748.1| Sulfite exporter TauE/SafE [Gallibacterium anatis UMN179]
          Length = 262

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 122/247 (49%), Gaps = 7/247 (2%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           ICL++ A  L G L+GLFG+GGG+++VPVL     + GI D++ M  A+GTS   I  T 
Sbjct: 7   ICLVVGA--LVGFLAGLFGIGGGVIIVPVLVYLLPMAGIPDNLLMSSALGTSFATIVVTG 64

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H + G I    +K    V+ +TT ++ L I  +DK+  +K FA   + + + M+
Sbjct: 65  FSSAQRHHKLGNIVWDAVKILAPVIMVTTFISGLFIGKLDKAIASKIFACLVVYLALKMV 124

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +     K        + G++ G  S A G+GGG F    +   G  + KA  +SA  
Sbjct: 125 LSIKPKQAVKTLTKTASVVGGILIGIASSAAGIGGGGFIVPFLNSRGIDMKKAIGSSAFC 184

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA----TKLSYMI 258
             L+    +L  I  GW  + +P +SLG+V + AV+ I   S   + L     TKL    
Sbjct: 185 GMLLGLSGMLSFIIGGWNAD-MPDYSLGYVYLPAVVGITVTSFFTSKLGATTTTKLPIPT 243

Query: 259 GKKYLTI 265
            K+Y  +
Sbjct: 244 LKRYFAL 250


>gi|237808701|ref|YP_002893141.1| hypothetical protein Tola_1956 [Tolumonas auensis DSM 9187]
 gi|237500962|gb|ACQ93555.1| protein of unknown function DUF81 [Tolumonas auensis DSM 9187]
          Length = 272

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 1/209 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           VMVPVL   FQ   +     + +A GTSL  + PTS+MS    ++ G ++  +LK W   
Sbjct: 35  VMVPVLYFIFQSFEVAPQHAILLATGTSLAAMIPTSIMSIRSQKKRGNVDTDLLKRWGIF 94

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC-ERKFPDNYVKYIWGMV 165
           L I  +  + + +H    +L   F    +L+ + ML R +      + P   V+    MV
Sbjct: 95  LLIGVLAGAALATHFGGVWLTAMFGSLAMLVSLNMLFRAKAKPFATELPGKAVQSFIAMV 154

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            G +S  +G+GGG  +  ++       ++A  TS+ +  LI+ P  +  + +G      P
Sbjct: 155 IGSVSVMIGIGGGTLSVPILTSCNYPPHRAVGTSSAIGLLISVPGAITMLVTGTTPADAP 214

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKL 254
             ++G VN+     I+P+S++  P+  +L
Sbjct: 215 FGTIGLVNLLGFACIVPMSVVFAPVGVRL 243


>gi|307133197|ref|YP_003885213.1| Integral membrane protein [Dickeya dadantii 3937]
 gi|306530726|gb|ADN00657.1| Integral membrane protein [Dickeya dadantii 3937]
          Length = 284

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 102/211 (48%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVPVL+  F   G++ S  +H+A+GTS+  I  T++ S   H +H  +   ++      +
Sbjct: 47  MVPVLTALFAAQGVEASHLVHLALGTSMAAIVITAISSLRTHHQHQAVLWPVVWRITPAI 106

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            + T   + + + +    L   F+ F   + + M+   +    R+ P      + G+  G
Sbjct: 107 LVGTFAATWLAALLPTRALAIFFSCFMAYVSLQMVLNIKPKPHRQLPGVPGMSLAGLTIG 166

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S  + +GGG  T   + +    I +A  TSA V   IA    L  + +GW   GLP +
Sbjct: 167 GISALVAIGGGSLTVPFLTWCNVRIQQAIGTSAAVGLPIALSGALGYMINGWSATGLPAF 226

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+G+V++ AV +I  +S    P+  +L++ +
Sbjct: 227 SVGYVSLPAVALISAVSFFTAPVGARLAHRL 257


>gi|292490792|ref|YP_003526231.1| hypothetical protein Nhal_0664 [Nitrosococcus halophilus Nc4]
 gi|291579387|gb|ADE13844.1| protein of unknown function DUF81 [Nitrosococcus halophilus Nc4]
          Length = 273

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 97/210 (46%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+V VL   F   GI D + MH+A+GTS   I  TS+ +   H R   +   I+      
Sbjct: 28  VIVAVLVHVFSAQGISDELSMHMAIGTSQATIVLTSMAAIWAHHRREGVLWLIMAAMAPG 87

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + +  ++ +++   +    L   F  F LL+   M    RL      P  ++  + G+  
Sbjct: 88  IMLGALLGAVIADALSGQVLKGLFGGFALLIAWQMGIGFRLTAAHPLPQRWILALVGVAI 147

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S   G+GGG FT   + ++G  +  A  T++     +A       ++ GW   GLP 
Sbjct: 148 GGVSALFGIGGGSFTVPYLSWHGIPMRNAVGTASACGFPLAIGGTCGFVWMGWDKLGLPA 207

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSY 256
           WS G+V   A + I+  S+L  PL  +L++
Sbjct: 208 WSSGYVYWPAAVGIVATSMLFAPLGARLAH 237


>gi|225076651|ref|ZP_03719850.1| hypothetical protein NEIFLAOT_01702 [Neisseria flavescens
           NRL30031/H210]
 gi|224952017|gb|EEG33226.1| hypothetical protein NEIFLAOT_01702 [Neisseria flavescens
           NRL30031/H210]
          Length = 269

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 123/259 (47%), Gaps = 15/259 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGID-DSICMHVAMGTSLGVIA 79
           D I  ++     +G ++GLFGVGGG ++VPV+  A QL GI       H+A+GTS  V+ 
Sbjct: 5   DIILALLAVGSAAGFIAGLFGVGGGTLIVPVVLWALQLQGIGAHPYAQHLAIGTSFAVMV 64

Query: 80  PTSVMS-FMEHRRHGTINMKILKDWIFVLPITT-VVTSLMISHVDKSF-----LNKAFAI 132
            T+  S + +H++H         DW  V  +T  ++  +++      +     L   F  
Sbjct: 65  FTTFSSMYAQHKKHAI-------DWATVRRMTPGMILGVLLGAATAKYMPTLALQVFFIA 117

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           F   + +  L+  +    R  P+       G + G  S  +G+GGG  +   +L+     
Sbjct: 118 FLAFIALKTLRDSKPKPSRTLPELPGLTAVGTLFGAASSWVGIGGGSLSVPFLLYCNFPA 177

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           ++A  TS+G++  IA    +    +G  +  LP  + GF+ + AV I+   +IL  PL  
Sbjct: 178 HRAIGTSSGLAWPIAIAGTIGYFANGLHIANLPEGTAGFIYLPAVAILSVATILFAPLGV 237

Query: 253 KLSYMIGKKYLTIGFSMIM 271
           K ++ +  + L I F +++
Sbjct: 238 KTAHKLPARKLKIAFGIML 256


>gi|71278251|ref|YP_270291.1| hypothetical protein CPS_3623 [Colwellia psychrerythraea 34H]
 gi|71143991|gb|AAZ24464.1| putative membrane protein [Colwellia psychrerythraea 34H]
          Length = 264

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 4/221 (1%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     ++G+   + M +A+GTSLG I  TS  +   H R   I  ++ K  + ++ 
Sbjct: 32  VPALVYLLPMVGVSSDVVMPMALGTSLGAIVITSTSAAYAHHRKSNIPWQLAKQLMILVA 91

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           +  +V + +   +    L + F+   +L+   ML       ER  P  YV  +   +TG 
Sbjct: 92  VGALVGAFIADSLSSEALTRFFSFVVILLAAYMLLSINASKERSLPATYVLQLLSFITGI 151

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+ GG      + F+G  +  A   +     ++A    L  I +G+ L  LP  S
Sbjct: 152 ISSLMGIAGGAILVPSLSFFGVPVRHAIGIATACGVMVALFGSLGYIITGFNLPNLPDLS 211

Query: 229 LGFVNIGAVLIILPISILITPL----ATKLSYMIGKKYLTI 265
           LG++ + A+L I+  S +  P+    A+KL     KK+  +
Sbjct: 212 LGYLYLPALLGIVISSSIFAPIGVKYASKLPVKTLKKFFAV 252


>gi|251787692|ref|YP_003002413.1| hypothetical protein Dd1591_0041 [Dickeya zeae Ech1591]
 gi|247536313|gb|ACT04934.1| protein of unknown function DUF81 [Dickeya zeae Ech1591]
          Length = 268

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 105/221 (47%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVPVL+  F   G++ +  +H+A+GTS+  I  T++ S   H +H  +   ++      +
Sbjct: 31  MVPVLTALFAAQGVETAHLVHLALGTSMAAIVITAISSLRTHHQHQAVLWTVVWRITPAI 90

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            + T   + + + +    L   F+ F   + + M+   +    R+ P      + G+  G
Sbjct: 91  LVGTFAATWLAALLPTRALAIFFSCFMAYVSLQMVLNIKPKPNRQLPGVPGMSLAGLTIG 150

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S  + +GGG  T   + +    I +A  TSA V   IA    L  + +GW   GLP +
Sbjct: 151 GISALVAIGGGSLTVPFLTWCNVRIQQAIGTSAAVGLPIALSGALGYMINGWSATGLPAF 210

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
           S+G+V++ AV +I  +S    P+  +L++ +    L   F+
Sbjct: 211 SVGYVSLPAVALISAVSFFTAPVGARLAHRLPVATLKKAFA 251


>gi|149192452|ref|ZP_01870646.1| hypothetical protein VSAK1_11133 [Vibrio shilonii AK1]
 gi|148833718|gb|EDL50761.1| hypothetical protein VSAK1_11133 [Vibrio shilonii AK1]
          Length = 263

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 113/222 (50%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           GT+SGL G+GGGL++VP L+      GI   + MH+A+ TSL  I  TS  S + H + G
Sbjct: 17  GTMSGLLGIGGGLIVVPALAFILPKFGIASDMVMHIALATSLASIIITSGSSAVNHLKLG 76

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
            +++ ++K  +  + I     S +   +   +L K FA+  LL+ I M    +    R  
Sbjct: 77  NVDLFVIKWLMPGVVIGGFAGSNVAEWIPSHYLPKVFAVIVLLLAIQMFLSIKSQVTRNL 136

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
           P  ++    G   G +S   G+GGG  +   +  +G  + KA  +S+    +IA   ++ 
Sbjct: 137 PSPFITTCCGAGIGMVSSLAGIGGGSMSVPFLSKHGVEMRKAVGSSSVCGCVIAIAGMIG 196

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            I  G  + GLP +S+G+V + A+L I   S+L T    KL+
Sbjct: 197 FIMHGAKVQGLPEYSIGYVYLPALLSIAATSMLTTKFGAKLA 238


>gi|222054260|ref|YP_002536622.1| protein of unknown function DUF81 [Geobacter sp. FRC-32]
 gi|221563549|gb|ACM19521.1| protein of unknown function DUF81 [Geobacter sp. FRC-32]
          Length = 264

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 9/213 (4%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVLS  F    +     +H+A+GTSL  I  TS+ S   H   G +N  +++     +  
Sbjct: 32  PVLSFIFAHQQLPPEHILHLALGTSLASIIFTSISSLRAHHARGAVNWNVVRQISPGIVF 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T + S + S +  +FL   F +F   + I M    +    R+ P     +  G + G +
Sbjct: 92  GTFLGSWVASRLSTAFLKGFFVVFLFYVAIQMFFNIKPQPHRQLPGKGTIFGVGGLIGGV 151

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG----LP 225
           S  +G+GGG  +   +L+   +++ A  TSA     I FP  L    +G+  NG    LP
Sbjct: 152 SSFVGIGGGSMSVPFLLWCNVAMHNAIGTSAA----IGFPIALAG-AAGYVANGLAASLP 206

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           P +LGFV++ A++ +   SI   PL  KL++++
Sbjct: 207 PHTLGFVHLPALMGVAAASIATAPLGAKLAHLL 239


>gi|271498621|ref|YP_003331646.1| hypothetical protein Dd586_0043 [Dickeya dadantii Ech586]
 gi|270342176|gb|ACZ74941.1| protein of unknown function DUF81 [Dickeya dadantii Ech586]
          Length = 268

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 104/221 (47%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVPVL+  F   G++ +  +H+A+GTS+  I  T++ S   H +H  +   ++      +
Sbjct: 31  MVPVLTALFAAQGVEKTHLVHLALGTSMAAIVITAISSLRTHHQHQAVMWPVVWRITPAI 90

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            + T   + + + +    L   F+ F   + + M+   +    R+ P      + G+  G
Sbjct: 91  LLGTFAATWLAALLPTRALAIFFSCFMAYVSLQMVLNIKPKPHRQLPGVTGMSLAGLTIG 150

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S  + +GGG  T   + +    I +A  TSA V   IA    L  + +GW   GLP  
Sbjct: 151 GISALVAIGGGSLTVPFLTWCNVRIQQAIGTSAAVGLPIALSGALGYMINGWSATGLPAL 210

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
           S+G+V++ AV +I  +S    P+  +L++ +    L   F+
Sbjct: 211 SVGYVSLPAVALISAVSFFTAPVGARLAHRLPVATLKKAFA 251


>gi|17549483|ref|NP_522823.1| integral membrane transmembrane protein [Ralstonia solanacearum
           GMI1000]
 gi|17431736|emb|CAD18415.1| putative of unknown function duf81; transmembrane protein
           [Ralstonia solanacearum GMI1000]
          Length = 273

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 124/251 (49%), Gaps = 9/251 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L ++A   +G  +G+FG+GGG +++P+L   ++  G+D +  + +A GTSL  +A T + 
Sbjct: 17  LFLLAGLTAGFFAGMFGIGGGAIVIPILVHVYRDAGMDMTEAIRLAFGTSLATMAFTGLS 76

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLK 143
           S++ HR+ G ++   L+  +    +  +V  ++ + +   +L    A+     GI L+++
Sbjct: 77  SYLSHRQRGNVDGAWLRKLMLPSGLGALVGGIIAARIPGGWLALGLALMLGYFGIKLLVQ 136

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
           R        + + Y +++ G ++G      G+GG       +   G S+  A  T+ GV 
Sbjct: 137 RSDAVVAWPWLERY-RHVAGFLSGLTYSLAGMGGASVITFYLTKAGLSLRAAIGTATGVI 195

Query: 204 ALIAFPALLVRIYSGWGLNGLPP--WSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             I+  A+L     G+GL    P  W  G++++ A+L +   SI+ + L  K +  +   
Sbjct: 196 LPISVGAIL-----GFGLTAGSPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPVA 250

Query: 262 YLTIGFSMIMF 272
            L  GF   MF
Sbjct: 251 VLRKGFGFFMF 261


>gi|300697909|ref|YP_003748570.1| hypothetical protein RCFBP_mp30101 [Ralstonia solanacearum
           CFBP2957]
 gi|299074633|emb|CBJ54189.1| conserved membrane protein of unknown function [Ralstonia
           solanacearum CFBP2957]
          Length = 283

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 124/251 (49%), Gaps = 9/251 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L ++A   +G  +G+FG+GGG +++P+L   ++  G+D +  + +A GTSL  +A T + 
Sbjct: 27  LFLLAGLTAGFFAGMFGIGGGAIVIPILVHVYRDAGMDMTEAIRLAFGTSLATMAFTGLS 86

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLK 143
           S++ HR+ G ++   L+  +    +  +V  ++ + +   +L    A+     GI L+++
Sbjct: 87  SYLSHRQRGNVDGAWLRKLMLPSGLGALVGGIIAARIPGGWLALGLALMLGYFGIKLLVQ 146

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
           R        + + Y +++ G ++G      G+GG       +   G S+  A  T+ GV 
Sbjct: 147 RSDAVVTWPWLERY-RHVAGFLSGLTYSLAGMGGASVVTFYLTKAGLSLRSAIGTATGVI 205

Query: 204 ALIAFPALLVRIYSGWGLNGLPP--WSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             I+  A+L     G+GL    P  W  G++++ A+L +   SI+ + L  K +  +   
Sbjct: 206 LPISVGAIL-----GFGLTAGAPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPVA 260

Query: 262 YLTIGFSMIMF 272
            L  GF   MF
Sbjct: 261 VLRKGFGFFMF 271


>gi|114048436|ref|YP_738986.1| hypothetical protein Shewmr7_2945 [Shewanella sp. MR-7]
 gi|113889878|gb|ABI43929.1| protein of unknown function DUF81 [Shewanella sp. MR-7]
          Length = 266

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 121/234 (51%), Gaps = 2/234 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V +ICL + A    G ++GL G+GGGL++VP L      +GI  +   H+A+ TSL  I 
Sbjct: 7   VFFICLALGA--FVGFMAGLLGIGGGLIVVPALLYILPSVGITSAQLPHIAIATSLAAII 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ S   H + G +   + +  +  + +  +++  +   +  + L + FA+F +LM I
Sbjct: 65  LTSISSARAHHKRGNVPWGLFRTMLPGIILGALMSGFIAEQIPAAALRQGFAVFVMLMAI 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M    +    R+ P++ + ++  M+   ++G +G+GGG+     + ++G  +  A   S
Sbjct: 125 QMAYPFKTESNRELPNSAILFVVAMIVAVIAGLMGIGGGVLLVPFLTYFGLQMRLAVGFS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           A    LI+    L  I +G+    LP  +LG++ + A+  ++  SIL+ P+  K
Sbjct: 185 AATGLLISLSGSLGYIIAGFNAPDLPEGTLGYIYLPALFGLIITSILMAPVGVK 238


>gi|207724941|ref|YP_002255338.1| protein of unknown function duf81 [Ralstonia solanacearum MolK2]
 gi|206590168|emb|CAQ37129.1| protein of unknown function duf81 [Ralstonia solanacearum MolK2]
          Length = 283

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 124/251 (49%), Gaps = 9/251 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L ++A   +G  +G+FG+GGG +++P+L   ++  G+D +  + +A GTSL  +A T + 
Sbjct: 27  LFLLAGLTAGFFAGMFGIGGGAIVIPILVHVYRDAGMDMTEAIRLAFGTSLATMAFTGLS 86

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLK 143
           S++ HR+ G ++   L+  +    +  +V  ++ + +   +L    A+     GI L+++
Sbjct: 87  SYLSHRQRGNVDGAWLRKLMLPSGLGALVGGIIAARIPGGWLALGLALMLGYFGIKLLVQ 146

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
           R        + + Y +++ G ++G      G+GG       +   G S+  A  T+ GV 
Sbjct: 147 RSDAVVTWPWLERY-RHVAGFLSGLTYSLAGMGGASVVTFYLTKAGLSLRSAIGTATGVI 205

Query: 204 ALIAFPALLVRIYSGWGLNGLPP--WSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             I+  A+L     G+GL    P  W  G++++ A+L +   SI+ + L  K +  +   
Sbjct: 206 LPISVGAIL-----GFGLTAGAPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPVA 260

Query: 262 YLTIGFSMIMF 272
            L  GF   MF
Sbjct: 261 VLRKGFGFFMF 271


>gi|262373321|ref|ZP_06066600.1| permease [Acinetobacter junii SH205]
 gi|262313346|gb|EEY94431.1| permease [Acinetobacter junii SH205]
          Length = 266

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 3/248 (1%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS+ S M H +
Sbjct: 12  IAGFTAGLFGVGGGLIIVPILFIVFTQLNYDPNVIMHIAVGTSLATIVVTSISSVMAHHK 71

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK--RDRLYC 149
              +   + K+    L + +   + +   +    L     IF + M   M +    ++  
Sbjct: 72  KSAVLWSVFKNLAPGLILGSFFGAGIADLMSGQHLQLVIGIFAVWMAYKMFRGAHAQIDP 131

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
            +  P   +++  G   G  S   G+GGG  T   +  +G  + +A ATSA     IA  
Sbjct: 132 NKHLPSAPLQFAAGGGIGIASAIFGIGGGSLTVPYLNRHGVVMQQAVATSAACGLPIALA 191

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS- 268
             +  ++ G       P ++G+V++ A L I  +S +   +  ++++ +    L   F+ 
Sbjct: 192 GAIGFMWFGAKEQIDVPNTIGYVHVYAFLGISVMSFITAKVGARVAHRLSAAMLKKCFAG 251

Query: 269 MIMFTTSF 276
           +++F  S+
Sbjct: 252 LLVFVGSY 259


>gi|241758532|ref|ZP_04756651.1| hypothetical protein NEIFL0001_1429 [Neisseria flavescens SK114]
 gi|241321367|gb|EER57515.1| hypothetical protein NEIFL0001_1429 [Neisseria flavescens SK114]
          Length = 269

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 121/259 (46%), Gaps = 15/259 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I  ++     +G ++GLFGVGGG ++VPV+    QL GI D     H+A+GTS  V+ 
Sbjct: 5   DIILALLAVGSAAGFIAGLFGVGGGTLIVPVVLWTLQLQGIGDHPYAQHLAIGTSFAVMV 64

Query: 80  PTSVMS-FMEHRRHGTINMKILKDWIFVLPITT-VVTSLMISHVDKSF-----LNKAFAI 132
            T+  S + +H++H         DW  V   T  ++  +++      +     L   F  
Sbjct: 65  FTTFSSMYAQHKKHAI-------DWATVRRTTPGMILGVLLGAATAKYMPTLALQVFFIA 117

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           F   + +  L+  +    R  P        G + G  S  +G+GGG  +   +L+     
Sbjct: 118 FLAFIALKTLRDSKPKPSRTLPALPGLTAVGTLFGAASSWVGIGGGSLSVPFLLYCNFPA 177

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           ++A  TS+G++  IA    +    +G  +  LP  + GF+ + AV I+   +IL  PL  
Sbjct: 178 HRAIGTSSGLAWPIAIAGTIGYFANGLHIANLPEGAAGFIYLPAVAILSVATILFAPLGV 237

Query: 253 KLSYMIGKKYLTIGFSMIM 271
           K ++ +  + L I F +++
Sbjct: 238 KTAHKLPARKLKIAFGIML 256


>gi|311693475|gb|ADP96348.1| membrane protein containing DUF81 [marine bacterium HP15]
          Length = 279

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 122/249 (48%), Gaps = 5/249 (2%)

Query: 27  IVASFL-----SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++AS+L     +GT++GLFG+GGGL++VPVL   F L GID  I  H+A+GTSL  I  T
Sbjct: 20  VIASYLALGALAGTVAGLFGIGGGLIIVPVLMFTFGLQGIDPDIIPHLAVGTSLATIVFT 79

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           SV S   H +HG +   + +     +    +V +   S +    L     IF +L+G+ M
Sbjct: 80  SVSSIRSHNKHGAVRWDLFRPMTVGIIGGALVGAWTASLMSGRALELVIGIFVILVGLKM 139

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
             +      R  P      + G   G+ S   G+GGG  T   + +    + +A  TSA 
Sbjct: 140 FFQVDPKPGRDVPGVAGLGVAGGFIGWGSAIFGIGGGTLTVPYLSWCNVRMQQAVGTSAA 199

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
               IA    L  I++GW    +P  S GF+ + A++ I+  S+    +   L++ +  +
Sbjct: 200 CGLPIAVSGALGNIWTGWHHPAVPELSAGFIYLPALIGIILTSVFFARVGANLAHRLNPQ 259

Query: 262 YLTIGFSMI 270
            L   FS++
Sbjct: 260 ILKRTFSIM 268


>gi|83749777|ref|ZP_00946752.1| Hypothetical membrane spanning protein [Ralstonia solanacearum
           UW551]
 gi|207738742|ref|YP_002257135.1| protein of unknown function duf81 [Ralstonia solanacearum IPO1609]
 gi|83723567|gb|EAP70770.1| Hypothetical membrane spanning protein [Ralstonia solanacearum
           UW551]
 gi|206592110|emb|CAQ59016.1| protein of unknown function duf81 [Ralstonia solanacearum IPO1609]
          Length = 283

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 124/251 (49%), Gaps = 9/251 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L ++A   +G  +G+FG+GGG +++P+L   ++  G+D +  + +A GTSL  +A T + 
Sbjct: 27  LFLLAGLTAGFFAGMFGIGGGAIVIPILVHVYRDAGMDMTEAIRLAFGTSLATMAFTGLS 86

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLK 143
           S++ HR+ G ++   L+  +    +  +V  ++ + +   +L    A+     GI L+++
Sbjct: 87  SYLSHRQRGNVDGAWLRKLMLPSGLGALVGGIIAARIPGGWLALGLALMLGYFGIKLLVQ 146

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
           R        + + Y +++ G ++G      G+GG       +   G S+  A  T+ GV 
Sbjct: 147 RSDAVVTWPWLERY-RHVAGFLSGLTYSLAGMGGASVVTFYLTKAGLSLRSAIGTATGVI 205

Query: 204 ALIAFPALLVRIYSGWGLNGLPP--WSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             I+  A+L     G+GL    P  W  G++++ A+L +   SI+ + L  K +  +   
Sbjct: 206 LPISVGAIL-----GFGLTAGAPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPVA 260

Query: 262 YLTIGFSMIMF 272
            L  GF   MF
Sbjct: 261 VLRKGFGFFMF 271


>gi|113971198|ref|YP_734991.1| hypothetical protein Shewmr4_2863 [Shewanella sp. MR-4]
 gi|113885882|gb|ABI39934.1| protein of unknown function DUF81 [Shewanella sp. MR-4]
          Length = 266

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 120/234 (51%), Gaps = 2/234 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V +ICL + A    G ++GL G+GGGL++VP L      +GI  +   H+A+ TSL  I 
Sbjct: 7   VFFICLALGA--FVGFMAGLLGIGGGLIVVPALLYILPSVGITSAQLPHIAIATSLAAII 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ S   H + G +   + +     + +  +++  +   +  + L + FA+F +LM I
Sbjct: 65  LTSISSARAHHKRGNVPWGLFRTMFPGIILGALMSGFIAEQIPAATLRQGFAVFVMLMAI 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M    +    R+ P++ + ++  M+   ++G +G+GGG+     + ++G  +  A   S
Sbjct: 125 QMAYPFKTESNRELPNSAILFVVAMIVAVIAGLMGIGGGVLLVPFLTYFGLQMRLAVGFS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           A    LI+    L  I +G+    LP  +LG++ + A+  ++  SIL+ P+  K
Sbjct: 185 AATGLLISLSGSLGYIIAGFNAPDLPEGTLGYIYLPALFGLIITSILMAPVGVK 238


>gi|218886301|ref|YP_002435622.1| hypothetical protein DvMF_1203 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757255|gb|ACL08154.1| protein of unknown function DUF81 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 265

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L+ AF L  I      H+A+GTS+  I  TS+ SF  H + G +   ++      +  
Sbjct: 32  PMLNFAFALQDIPGDYMQHLALGTSMASIMFTSISSFRAHHKRGAVLWNVVWRITPGIIT 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T++ + +++ +  +FL   F  F   +   ML   +    R+ P     +  G V G +
Sbjct: 92  GTLIGTWVVAQLSTNFLKGFFVCFLYWVAAQMLLNLKPKASRELPGTMGMFGMGNVIGGV 151

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   M +   +++ A  TSA +   IA    +  I +G    GLP  + 
Sbjct: 152 SSLVGIGGGTLSVPFMAWCNVAMHTAIGTSAAIGFPIAVSGTVGYIVNGLATQGLPANTF 211

Query: 230 GFVNIGAVLIILPISILITPLATKLSY 256
           GFV + A++ I+  S+L  PL  +L++
Sbjct: 212 GFVYLPALVGIVCASVLTAPLGARLAH 238


>gi|163851134|ref|YP_001639177.1| hypothetical protein Mext_1707 [Methylobacterium extorquens PA1]
 gi|163662739|gb|ABY30106.1| protein of unknown function DUF81 [Methylobacterium extorquens PA1]
          Length = 270

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 5/247 (2%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D +V  I +  +   +SG +SGLFG+GG  V +P+       +GI  S  MHVA  TS+ 
Sbjct: 2   DDLVLRIIIFAIVGLVSGFISGLFGIGGSTVRLPIFIYLLPWVGIGQSALMHVASATSMA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           ++ P+++ +  +    G +++   K W+  L I   + ++++ H     L   FA++ LL
Sbjct: 62  LVIPSAITATRKQYALGNLDVGFYKTWVIGLFIGVALGAILLPHGSTEILQTLFAVYILL 121

Query: 137 MGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +G  +   R R     + P    +       G ++   G  GG  T  ++   G ++ KA
Sbjct: 122 VGFYIAFGRGRFSSRSEPPSGSKRIGIASFVGLVAALTGTSGGTLTTPILSTCGLALEKA 181

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            A ++    +    A +  I SGW     P +SLG+V++   ++++P  ++  P      
Sbjct: 182 IAIASATGLVTGSIATIGGILSGWHAPDRPSYSLGYVDLVIFVVMMPTVMISAPWGVS-- 239

Query: 256 YMIGKKY 262
             +G+K+
Sbjct: 240 --VGEKF 244


>gi|194290538|ref|YP_002006445.1| membrane lipoprotein, cog0477/duf81 [Cupriavidus taiwanensis LMG
           19424]
 gi|193224373|emb|CAQ70384.1| putative membrane lipoprotein, COG0477/DUF81 [Cupriavidus
           taiwanensis LMG 19424]
          Length = 274

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+  F  +G      +H+A+ TS+G I  TS+ S   H + G +   I+   + + P 
Sbjct: 37  PFLTLLFTSLGFAGEAIVHMAIATSMGTILFTSLSSVRAHHKRGAVRWPIV---LALAPG 93

Query: 110 TTVVTSLMISHV----DKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
             +   +    V      S+L+ AFA F     + ML+  R    R+ P        G V
Sbjct: 94  IVIGGMVGGGKVFAALKTSWLSLAFAGFVGFSALQMLRNRRPRPGRQLPGFAGMAGAGGV 153

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            GFLS  +G GG   +   M +    I+ A ATSA +   IA  ++   I+SGW   GLP
Sbjct: 154 IGFLSSLVGAGGAFVSVPFMTWCNVPIHNAVATSAALGFPIAAASVAGYIWSGWHAPGLP 213

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
             SLG++ + A+L+I   S+L  PL  + ++ +    L   F++++
Sbjct: 214 AGSLGYLYLPALLVIAAASVLTAPLGARTAHRMDVGQLRKVFAVLL 259


>gi|88707016|ref|ZP_01104713.1| conserved hypothetical protein, membrane (DUF81) [Congregibacter
           litoralis KT71]
 gi|88698744|gb|EAQ95866.1| conserved hypothetical protein, membrane (DUF81) [Congregibacter
           litoralis KT71]
          Length = 282

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 14/228 (6%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL + F L G+  +  M +A GTSL VI PT++ S + H R G ++  IL  W   +  
Sbjct: 36  PVLFEVFLLQGVPKASAMLLATGTSLAVIVPTAMSSSLSHWRRGNVDGAILFRWFPAMLA 95

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK------RDRLYCERK-------FPDN 156
             V  + +   +    L   FA+F L +G L L         +L  E          P  
Sbjct: 96  AVVFGAWLAPSLPAEPLIGLFAVFALSLGFLKLSGGDGAGDGKLGVEGPDEENIPMLPAA 155

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           Y++       GF+   LGVG G     +M  +   +++A  T+A +  +IA P +LV + 
Sbjct: 156 YLQLGIAAAIGFVCVLLGVGAGTLGVAVMTLFHVPMHRAVGTAAVLGLVIAAPGVLVALC 215

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
                 G P +S+G V++   L I P++IL+ PL  ++   +  + L 
Sbjct: 216 HVVP-AGAPVYSIGHVSVPGFLSIAPLAILMAPLGVRIGAALSARRLQ 262


>gi|149925520|ref|ZP_01913784.1| hypothetical protein LMED105_04832 [Limnobacter sp. MED105]
 gi|149825637|gb|EDM84845.1| hypothetical protein LMED105_04832 [Limnobacter sp. MED105]
          Length = 278

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 121/256 (47%), Gaps = 4/256 (1%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
             V  YI + +VA FL+G L    G     V+VP L  AF+L  +       +A+GTS+ 
Sbjct: 16  QAVAAYIAIGVVAGFLAGLLGVGGGS----VLVPALVWAFKLAALPGQWHFRLALGTSMA 71

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I  TSV S   H  HG +   ++K++I  + + T+  + +  HV  +FL   FA+F  L
Sbjct: 72  TILFTSVSSVRSHHLHGAVRWDVVKNFIPGILLGTLFGTFLARHVSTTFLIVFFALFMGL 131

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
               M    +    R  P    +       G  S  + VGGG  T   +++   SI  A 
Sbjct: 132 ASFQMFFEYKPKPGRVLPGRNGQMGVATFIGTASSLVAVGGGALTVPFLVWCNVSIKNAI 191

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T++ +   IA    +  I++GW   GLP  SLGFV   A+L  +  S+L+ P   + ++
Sbjct: 192 GTASAMGFPIALGGTIGFIFNGWTAPGLPTGSLGFVYTPALLFTVVASVLLAPWGAQAAH 251

Query: 257 MIGKKYLTIGFSMIMF 272
           ++    L   F++++F
Sbjct: 252 ILPAPLLRKVFAVVVF 267


>gi|239815526|ref|YP_002944436.1| hypothetical protein Vapar_2544 [Variovorax paradoxus S110]
 gi|239802103|gb|ACS19170.1| protein of unknown function DUF81 [Variovorax paradoxus S110]
          Length = 273

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 1/226 (0%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVP ++      G+   + + +A+ TS+  I  TSV S   H + G +   I++     +
Sbjct: 35  MVPFITIIMGHRGVASDLAVKMAIATSMATIIFTSVSSVRAHHKRGAVRWDIVRRLAPGI 94

Query: 108 PITTVVTSLMI-SHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
            I +++ SL + + +  + L   FA+F       M    +    R+ P    +   G   
Sbjct: 95  VIGSLLGSLGVFALLKGTVLAIVFALFVGFSATQMFLDRKPKPTRQMPGTAGQLSAGGAI 154

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           GF+SG +G GGG  +   M +   SI+ A ATSA +   IA   +L  + SG  + GLP 
Sbjct: 155 GFISGLVGAGGGFVSVPFMTWCNISIHNAVATSAALGFPIAVANVLGYVVSGQSVQGLPA 214

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
            S G++ + A+++I   S+L  PL  K ++ +  K L   F+ I++
Sbjct: 215 GSFGYIWLPALVVIALCSVLTAPLGAKAAHNLPVKKLKRVFASILY 260


>gi|299069665|emb|CBJ40938.1| conserved membrane protein of unknown function [Ralstonia
           solanacearum CMR15]
          Length = 260

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 124/251 (49%), Gaps = 9/251 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L ++A   +G  +G+FG+GGG +++P+L   ++  G+D +  + +A GTSL  +A T + 
Sbjct: 4   LFLLAGLTAGFFAGMFGIGGGAIVIPILVHVYRDAGMDMTEAIRLAFGTSLATMAFTGLS 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLK 143
           S++ HR+ G ++   L+  +    +  +V  ++ + +   +L    A+     GI L+++
Sbjct: 64  SYLSHRQRGNVDGAWLRKLMLPSGLGALVGGIIAARIPGGWLALGLALMLGYFGIKLLVQ 123

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
           R        + + Y +++ G ++G      G+GG       +   G S+  A  T+ GV 
Sbjct: 124 RSDAVIAWPWLERY-RHVAGFLSGLTYSLAGMGGASVITFYLTKAGLSLRAAIGTATGVI 182

Query: 204 ALIAFPALLVRIYSGWGLNGLPP--WSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             I+  A+L     G+GL    P  W  G++++ A+L +   SI+ + L  K +  +   
Sbjct: 183 LPISVGAIL-----GFGLTAGSPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPVA 237

Query: 262 YLTIGFSMIMF 272
            L  GF   MF
Sbjct: 238 VLRKGFGFFMF 248


>gi|170728324|ref|YP_001762350.1| hypothetical protein Swoo_3998 [Shewanella woodyi ATCC 51908]
 gi|169813671|gb|ACA88255.1| protein of unknown function DUF81 [Shewanella woodyi ATCC 51908]
          Length = 268

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 118/237 (49%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D IC  ++   L G  +GLFG+GGG +MVP+L+  F   GI  +  + +A+GTS+  I 
Sbjct: 4   IDVICSFLLLGALVGFAAGLFGIGGGGIMVPMLTAIFLNQGIAMNTVVPLALGTSMAAII 63

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ +   H     I   ++ + +  + + T  ++ + S VD  +L   FA+F   + +
Sbjct: 64  VTSLSNLRAHNAKKGILWPVVTNMLPGIFLGTFASTFIASKVDAFYLALFFALFMAYVSM 123

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            ML    +  +++ P+    ++ G   G +S  + +GGG  T   +      I KA  TS
Sbjct: 124 KMLFSKTVKSDQRIPNTGNMFLAGSGIGAISALVSIGGGSLTVPYLAGRSIEIKKAIGTS 183

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +   I+    L  +  GW    L  +++G++ + AVL+I   S L  P   KL+Y
Sbjct: 184 AAIGLPISVAGTLGYLIHGWNSTSLINYAVGYIYLPAVLLISITSFLTVPYGVKLAY 240


>gi|300694277|ref|YP_003750250.1| hypothetical protein RPSI07_mp1300 [Ralstonia solanacearum PSI07]
 gi|299076314|emb|CBJ35627.1| conserved membrane protein of unknown function [Ralstonia
           solanacearum PSI07]
          Length = 260

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 124/251 (49%), Gaps = 9/251 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L ++A   +G  +G+FG+GGG +++P+L   ++  G+D +  + +A GTSL  +A T + 
Sbjct: 4   LFLLAGLTAGFFAGMFGIGGGAIVIPILVHVYRDAGMDMTEAIRLAFGTSLATMAFTGLS 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLK 143
           S++ HR+ G ++   L+  +    +  +V  ++ + +   +L    A+     GI L+++
Sbjct: 64  SYLSHRQRGNVDSAWLRKLMLPSGLGALVGGIIAARIPGGWLALGLALMLGYFGIKLLVQ 123

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
           R        + + + +++ G ++G      G+GG       +   G S+  A  T+ GV 
Sbjct: 124 RSDAVVTWPWLERF-RHVAGFLSGLTYSLAGMGGASVVTFYLTKAGLSLRSAIGTATGVI 182

Query: 204 ALIAFPALLVRIYSGWGLNGLPP--WSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             I+  A+L     G+GL    P  W  G++++ A+L +   SI+ + L  K +  +   
Sbjct: 183 LPISVGAIL-----GFGLTAGSPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPVA 237

Query: 262 YLTIGFSMIMF 272
            L  GF   MF
Sbjct: 238 VLRKGFGFFMF 248


>gi|319794038|ref|YP_004155678.1| hypothetical protein Varpa_3382 [Variovorax paradoxus EPS]
 gi|315596501|gb|ADU37567.1| protein of unknown function DUF81 [Variovorax paradoxus EPS]
          Length = 281

 Score = 79.3 bits (194), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 1/226 (0%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVP ++      G+   + + +A+ TS+  I  TSV S   H + G +   I+K     +
Sbjct: 43  MVPFITIIMGHRGVSSDLAVKMAIATSMATIIFTSVSSVRAHHKRGAVRWDIVKRLAPGI 102

Query: 108 PITTVVTSLMI-SHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
            I ++  SL + + +  + L   FA+F       M    +    R+ P    +   G V 
Sbjct: 103 VIGSLAGSLGVFALLKGTALAIFFALFVGFSATQMFLDKKPKPTRQMPGTAGQLAGGGVI 162

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           GF+SG +G GGG  +   M +   SI+ A ATSA +   IA   +L    SG  + GLP 
Sbjct: 163 GFISGLVGAGGGFISVPFMTWCNISIHNAVATSAALGFPIAVANVLGYAISGQTVQGLPT 222

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
            S G++ + A+++I   S+   PL  K ++ +  K L   F+ I++
Sbjct: 223 GSFGYIWLPALVVIAVCSVFTAPLGAKAAHTLPVKKLKRVFASILY 268


>gi|289164145|ref|YP_003454283.1| transmembrane protein [Legionella longbeachae NSW150]
 gi|288857318|emb|CBJ11145.1| putative transmembrane protein [Legionella longbeachae NSW150]
          Length = 263

 Score = 79.3 bits (194), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 112/214 (52%), Gaps = 5/214 (2%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I + + A  ++G L+ LFG GGG+V+VP+L       GI   + MH+A+GTSL ++    
Sbjct: 2   ISIYLFAGIVTGLLATLFGFGGGIVVVPLLFWLLPFDGIPQELAMHLAVGTSLMLMFINM 61

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +   H     ++M +L+  + ++ +  V  +L+ + +    L  AF I   ++ +  L
Sbjct: 62  IYAAWLHYLKQNMDMILLRKMLPLVALGAVSGALIATILSAKELKYAFLILIFVVLLRNL 121

Query: 143 KR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           K+    D+L    K P + + Y     TG ++  LG+GG +     +  YG ++ KA+A 
Sbjct: 122 KQEFFTDKL-TAHKMPTHALLYCVSYFTGTIAALLGIGGSVIIVPFLRHYGLTMTKASAL 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           + G++A       ++ I +G+ +  LPP+S G++
Sbjct: 181 ANGLAAPSGLIGSIIFIAAGFHIPHLPPYSTGYL 214


>gi|71909623|ref|YP_287210.1| hypothetical protein Daro_4013 [Dechloromonas aromatica RCB]
 gi|71849244|gb|AAZ48740.1| Protein of unknown function DUF81 [Dechloromonas aromatica RCB]
          Length = 269

 Score = 79.3 bits (194), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 97/203 (47%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
           F  +G      +H+A+GTS+  I  TS+ S   H  H  +   +++     + I T + +
Sbjct: 40  FAWLGFPGREVLHLALGTSIATILFTSLSSLRAHHAHRAVLWPVMRALTPGILIGTSLGA 99

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGV 175
            +   +    L+  F  F L + + M+   R    R  P      + G+V G ++    +
Sbjct: 100 GLAVAISSRALSIFFVGFMLFVALQMIANLRPQPSRNLPGRAGLGLAGIVIGAVASLAAM 159

Query: 176 GGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           GGG  T   ++    + ++A  TSA V   IA    L  I++GW   GLPP SLGFV + 
Sbjct: 160 GGGALTVPYLIRCNVNPHQAIGTSAAVGLPIALGGTLGYIWNGWAHPGLPPGSLGFVYLP 219

Query: 236 AVLIILPISILITPLATKLSYMI 258
           A+ IIL  S+L  PL  +L++ +
Sbjct: 220 ALGIILLASVLAAPLGARLAHRL 242


>gi|261250326|ref|ZP_05942902.1| hypothetical protein VIA_000346 [Vibrio orientalis CIP 102891]
 gi|260939442|gb|EEX95428.1| hypothetical protein VIA_000346 [Vibrio orientalis CIP 102891]
          Length = 263

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 100/207 (48%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     + G+D  I MH+A+ TSL  I  TS  S + H + G ++M ++K  +  + 
Sbjct: 32  VPALLFLLPMAGVDPDISMHIALATSLATIIATSGSSALNHFKLGNVDMFVVKWLMPGVV 91

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           +   + + +   +   +L K F +    + + ML   +    +  P N V    G   G 
Sbjct: 92  VGGFLGAKVAEWIPSQYLPKVFGVIVFCLAVQMLFSLKGKAAKTMPSNAVTMGIGTGIGM 151

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S   G+GGG  +   +  +G  + KA  +S+    +IA   +L  I  G+ +  LP +S
Sbjct: 152 ISSLAGIGGGSLSVPFLNRHGIDMRKAVGSSSVCGCMIAISGMLGFIMHGYKVESLPEYS 211

Query: 229 LGFVNIGAVLIILPISILITPLATKLS 255
           +G+V + A++ I   S+L+T    KL+
Sbjct: 212 IGYVYLPALIAIASTSMLMTRTGAKLA 238


>gi|298368414|ref|ZP_06979732.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282417|gb|EFI23904.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
          Length = 268

 Score = 79.0 bits (193), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 129/261 (49%), Gaps = 13/261 (4%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVI 78
           ++ I  ++    L+G ++GL GVGGG ++VPV+  A QL GI +     H+A+GTS  V+
Sbjct: 4   LEIIAAMLAVGSLAGFIAGLLGVGGGTIIVPVVLWALQLQGIGNHPYAQHLAVGTSFAVM 63

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKA-----FAI 132
             T++ S     +  +I      DW  V+ +T  +T+ ++I      ++  A     F  
Sbjct: 64  LFTTLSSVAAQHKKQSI------DWQTVMRMTPGMTAGVLIGAASAKYMPTAGFQVFFIA 117

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           F  ++ +  L   +    R  P        G++ G +S  +G+GGG  +   +++     
Sbjct: 118 FISIIAVRTLVGIKPKPSRTLPRLAGLNATGVLFGAVSSWVGIGGGSLSVPFLIYCNMPP 177

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           +KA  TS+G++  IA    +  + +G  ++ LP  ++GF+ + AV I+   +I+  PL  
Sbjct: 178 HKAVGTSSGLAWPIALAGTVGYLAAGRHISNLPDGAVGFLYLPAVAILSIATIVFAPLGV 237

Query: 253 KLSYMIGKKYLTIGFSMIMFT 273
           K ++ +  + L   F +++  
Sbjct: 238 KTAHKLPPETLKTAFGLLLLA 258


>gi|21228951|ref|NP_634873.1| permease [Methanosarcina mazei Go1]
 gi|20907488|gb|AAM32545.1| hypothetical permease [Methanosarcina mazei Go1]
          Length = 270

 Score = 79.0 bits (193), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 124/253 (49%), Gaps = 4/253 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           YI  + +    +G +SGL GVGGG +M PV     Q  G+   I + +A+GTSL VI   
Sbjct: 8   YIVTLFLTGAFTGVISGLLGVGGGFIMFPVQYWLLQENGLHPDIAIRIALGTSLFVILLN 67

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+   ++++R   +  +          + +   S + S++  S L+  F I  ++  +  
Sbjct: 68  SISVTLKYQRKKAVLWRQATLMGIFGSVASFGGSAVASYLPASVLSTTFGIVVIIGAVRT 127

Query: 142 LKRDRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATS 199
            K        +     + YI+ G++ GF SG LG+GGG+    +ML F    + KA  TS
Sbjct: 128 YKTPAAKETEEISTRKLSYIFAGILIGFFSGLLGIGGGVIGIPIMLIFLHFDMLKAVGTS 187

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN-IGAVLIILPISILITPLATKLSYMI 258
           A V    +F   L  I  GWG  GLPP+SLG++N +  VL+ +P           +++++
Sbjct: 188 AAVIMFTSFGGSLGYIIHGWGQPGLPPYSLGYINLLNWVLLAIP-GFFAARKGADIAHIV 246

Query: 259 GKKYLTIGFSMIM 271
             +YL   F ++M
Sbjct: 247 NPEYLKHLFVLLM 259


>gi|240118211|ref|ZP_04732273.1| hypothetical protein NgonPID_07086 [Neisseria gonorrhoeae PID1]
 gi|268603923|ref|ZP_06138090.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268588054|gb|EEZ52730.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
          Length = 268

 Score = 79.0 bits (193), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +  T++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQTVDWKTIFAMMPGMIFGVFAGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   R    R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGRQTASRPLPGLPALTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLVNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKESFGIML 256


>gi|325295604|ref|YP_004282118.1| hypothetical protein Dester_1428 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325066052|gb|ADY74059.1| protein of unknown function DUF81 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 263

 Score = 79.0 bits (193), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 117/212 (55%), Gaps = 8/212 (3%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           LSG L+GLFG+GGG+V+VP+    F  M I ++I + +++ TSL VI   ++ +   H  
Sbjct: 16  LSGFLAGLFGIGGGIVLVPLFWILFSHMKIPENIAIKLSIATSLSVITMITLFTSGFHIL 75

Query: 92  HGTINM-KILKDWIFVLPITTVVTSLMISHVDKSF-LNKAFAIFCLLMGILMLKRDRLYC 149
            G I + +++K  ++++P   V+  +  SH+  ++ L K FAI  L++GI +LK  R   
Sbjct: 76  KGKIKLEELIKLLVWIVP--GVILGVSFSHLLPAYILKKLFAIVLLIIGIKILKGTR-EL 132

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATATSAGVSALIAF 208
           + K  + ++  I   ++ FLS  LG+GGG   N +L  F    + K  A ++ +S + AF
Sbjct: 133 KAKLEEKFLIPITVALSAFLSSLLGIGGGTIVNSILFSFSKMKVDKVVALASIISFINAF 192

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
              +   Y       +  W +G+V + AV+++
Sbjct: 193 FGSIT--YMLLPATKVLDWQVGYVYLPAVILV 222


>gi|241763101|ref|ZP_04761161.1| protein of unknown function DUF81 [Acidovorax delafieldii 2AN]
 gi|241367726|gb|EER61980.1| protein of unknown function DUF81 [Acidovorax delafieldii 2AN]
          Length = 272

 Score = 79.0 bits (193), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 1/225 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L+    L  +   + + +A+ TS+  I  TS+ S   H R G +   I++     + 
Sbjct: 34  VPFLTYILGLQKVGPGLAVKMAIATSMATIMFTSISSVRAHHRRGAVRWDIVRRLAPGIV 93

Query: 109 ITTVVTSLMI-SHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
              +V SL + + +  +FL   F +F       M    +    R+ P    +   G V G
Sbjct: 94  AGGLVASLGVFALLKGAFLAIFFGLFVSFSATQMFLDKKPAPSRQMPGTAGQLTAGGVIG 153

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           FLSG +G GGG  +   M +   +I+ A ATSA +   IA   ++     G  +  LPP 
Sbjct: 154 FLSGLVGAGGGFVSVPFMTWCNVAIHNAVATSAALGFPIALANVVGYAIGGQSVADLPPA 213

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           S G++ + A+ +I   S+L  PL  + ++ +  K L   F+ ++F
Sbjct: 214 SFGYIWLPALAVIATCSVLTAPLGARAAHQLPVKQLKRIFASLLF 258


>gi|158336922|ref|YP_001518097.1| hypothetical protein AM1_3794 [Acaryochloris marina MBIC11017]
 gi|158307163|gb|ABW28780.1| conserved hypothetical membrane protein [Acaryochloris marina
           MBIC11017]
          Length = 278

 Score = 78.6 bits (192), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 110/238 (46%), Gaps = 17/238 (7%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP L   F L+ +     MH+A G+S+ ++  T+  S   H R   I   I +  I  +
Sbjct: 31  IVPGLFYLFDLIQLPQESLMHMAAGSSMCIMICTAASSTWAHHRQEHIQWSIFRTIIAGI 90

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW----- 162
            +  V  +L+ + +    L   F IF      L++   +++ E+K  D   + +      
Sbjct: 91  AVGVVSGNLLANRMPTQLLELIFGIF------LLVVSTKIFFEKKSEDAEEQTVGAPGIV 144

Query: 163 -----GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
                GMV GF SG LG+GGG  +   +L+ G  + KA+ TSA  +  IA    L  +  
Sbjct: 145 PTSAVGMVIGFKSGVLGIGGGALSVPFLLYCGLPMKKASGTSASFTLPIAIVGTLSFLLL 204

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                 + PWS G+V   AVL++ P ++L  P+  K + ++  + L   F+ ++   S
Sbjct: 205 SGNQTAI-PWSTGYVYWPAVLLVAPFTMLGAPIGAKFAGIVAPEKLRTIFAGLLLVIS 261


>gi|152999763|ref|YP_001365444.1| hypothetical protein Shew185_1230 [Shewanella baltica OS185]
 gi|151364381|gb|ABS07381.1| protein of unknown function DUF81 [Shewanella baltica OS185]
          Length = 266

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 117/234 (50%), Gaps = 2/234 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V +ICL + A    G ++GL G+GGGL++VP L      +GI  +   H+A+ TSL  I 
Sbjct: 7   VFFICLALGA--FVGFMAGLLGIGGGLIVVPALLYILPSVGISSAQLPHIAIATSLAAII 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ S   H + G I   + K  +  + +  + +  +   +  + L + FAIF +LM I
Sbjct: 65  LTSISSTRAHHKRGNIPWDLFKTMLPGIILGALTSGFIAERISAAALQQGFAIFVVLMSI 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M    +    R+ P   + ++   +   ++G +G+GGG+     + F+G  +  A   S
Sbjct: 125 QMAYPFKAESNRELPSAPILFVVAALVAMIAGLMGIGGGVLLVPFLTFFGLQMRYAVGFS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           A    LI+    L  I +G+    LP  +LGF+ + A+  ++  S+L+ P+  K
Sbjct: 185 AATGLLISLSGSLGYIIAGFNAPELPYGTLGFIYLPALFGLVITSVLMAPVGVK 238


>gi|126173424|ref|YP_001049573.1| hypothetical protein Sbal_1186 [Shewanella baltica OS155]
 gi|304409348|ref|ZP_07390968.1| protein of unknown function DUF81 [Shewanella baltica OS183]
 gi|307303706|ref|ZP_07583459.1| protein of unknown function DUF81 [Shewanella baltica BA175]
 gi|125996629|gb|ABN60704.1| protein of unknown function DUF81 [Shewanella baltica OS155]
 gi|304351866|gb|EFM16264.1| protein of unknown function DUF81 [Shewanella baltica OS183]
 gi|306912604|gb|EFN43027.1| protein of unknown function DUF81 [Shewanella baltica BA175]
          Length = 266

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 117/234 (50%), Gaps = 2/234 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V +ICL + A    G ++GL G+GGGL++VP L      +GI  +   H+A+ TSL  I 
Sbjct: 7   VFFICLALGA--FVGFMAGLLGIGGGLIVVPALLYILPSVGISSAQLPHIAIATSLAAII 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ S   H + G I   + K  +  + +  + +  +   +  + L + FAIF +LM I
Sbjct: 65  LTSISSTRAHHKRGNIPWDLFKTMLPGIILGALTSGFIAERISAAALQQGFAIFVVLMSI 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M    +    R+ P   + ++   +   ++G +G+GGG+     + F+G  +  A   S
Sbjct: 125 QMAYPFKAESNRELPSAPILFVVAALVAMIAGLMGIGGGVLLVPFLTFFGLQMRYAVGFS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           A    LI+    L  I +G+    LP  +LGF+ + A+  ++  S+L+ P+  K
Sbjct: 185 AATGLLISLSGSLGYIIAGFNAPELPYGTLGFIYLPALFGLVITSVLMAPVGVK 238


>gi|254449162|ref|ZP_05062612.1| membrane protein [gamma proteobacterium HTCC5015]
 gi|198261208|gb|EDY85503.1| membrane protein [gamma proteobacterium HTCC5015]
          Length = 269

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 101/209 (48%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P++       G+     + +A+ TSL +I PTS+ S   H R G +   +    +  +  
Sbjct: 33  PIIVAILHAQGLAVDYAIKIAVATSLAIIIPTSLSSARAHHRSGALRWPLFWQLLPGIIA 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            TV+   ++  + + +L   F++ C  +G+ ML   +    R+ P +    + G + G +
Sbjct: 93  GTVLGGFIVDAMPELWLRLFFSVGCWAVGLKMLLGAQPKPHRQLPASLGMSVAGSIIGAI 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  LG+GGG  T   + +   ++ +A ATS+     IA    +    +G  L  LP +SL
Sbjct: 153 SAMLGIGGGSLTVPFLHWCNVNMREAVATSSACGLPIAVAGAITLALTGLDLEALPQYSL 212

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMI 258
           G++ + A L I   +IL+ P+  KL++ +
Sbjct: 213 GYIYLPAFLGIATTAILMAPVGAKLAHRL 241


>gi|270157464|ref|ZP_06186121.1| putative membrane protein [Legionella longbeachae D-4968]
 gi|269989489|gb|EEZ95743.1| putative membrane protein [Legionella longbeachae D-4968]
          Length = 263

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 109/208 (52%), Gaps = 5/208 (2%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A  ++G L+ LFG GGG+V+VP+L       GI   + MH+A+GTSL ++    + +   
Sbjct: 8   AGIVTGLLATLFGFGGGIVVVPLLFWLLPFDGIPQELAMHLAVGTSLMLMFINMIYAAWL 67

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR---- 144
           H     ++M +L+  + ++ +  V  +L+ + +    L  AF I   ++ +  LK+    
Sbjct: 68  HYLKQNMDMILLRKMLPLVALGAVSGALIATILSAKELKYAFLILIFVVLLRNLKQEFFT 127

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
           D+L    K P + + Y     TG ++  LG+GG +     +  YG ++ KA+A + G++A
Sbjct: 128 DKL-TAHKMPTHALLYCVSYFTGTIAALLGIGGSVIIVPFLRHYGLTMTKASALANGLAA 186

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFV 232
                  ++ I +G+ +  LPP+S G++
Sbjct: 187 PSGLIGSIIFIAAGFHIPHLPPYSTGYL 214


>gi|323497787|ref|ZP_08102801.1| hypothetical protein VISI1226_17956 [Vibrio sinaloensis DSM 21326]
 gi|323317134|gb|EGA70131.1| hypothetical protein VISI1226_17956 [Vibrio sinaloensis DSM 21326]
          Length = 263

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 100/207 (48%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     + GI+ SI M +A+ TSL  I  TS  S   H + G ++M ++K  +  + 
Sbjct: 32  VPALMFLLPMAGIEPSIAMQIALATSLASIIVTSGSSAYNHFKLGNVDMFVVKWLMPGVV 91

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           I   + + +   +   +L K F +  L + + ML   R   +R+ P +      G   G 
Sbjct: 92  IGGFLGANVAEWIPSQYLPKVFGVIVLCLAVQMLFSIRGKSQRQMPGSGATMSIGTGIGM 151

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S   G+GGG  +   +  +G  + KA  +S+     IA   +L  I+ G+    LP +S
Sbjct: 152 ISSLAGIGGGSLSVPFLNRHGIEMRKAVGSSSVCGCFIALSGMLGFIFHGYKAEALPAYS 211

Query: 229 LGFVNIGAVLIILPISILITPLATKLS 255
           LG+V + A++ I   S+L T +  +L+
Sbjct: 212 LGYVYLPALIGITSTSMLTTRIGARLA 238


>gi|197118209|ref|YP_002138636.1| membrane protein [Geobacter bemidjiensis Bem]
 gi|197087569|gb|ACH38840.1| membrane protein DUF81, putative [Geobacter bemidjiensis Bem]
          Length = 263

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 1/210 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VPVL+  F    + ++  +H+A+GTSL  I  TSV S   H R G +   +++     
Sbjct: 28  VIVPVLTFIFTAQHLPEAHILHLALGTSLASIMFTSVSSLRAHHRRGAVEWTVVRRISAG 87

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + + T   S + S +   FL   F +F   +   ML   +   +R+ P        G + 
Sbjct: 88  ILVGTFAGSWVASQLSTRFLKGFFVVFLYYVAAQMLLNIKPKAQRQLPGLAAMSGVGGII 147

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  +G+GGG  T   +++   +I +A  TS+ V   IA       + +GW  + LP 
Sbjct: 148 GGVSSLVGIGGGTMTVPFLVWCNVAIPRAIGTSSAVGFPIALAGAAGYLVNGWSAD-LPQ 206

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSY 256
           +SLGFV + A+  I   SI+  PL  KL++
Sbjct: 207 YSLGFVYLPALAGISAASIITAPLGAKLAH 236


>gi|237654159|ref|YP_002890473.1| hypothetical protein Tmz1t_3502 [Thauera sp. MZ1T]
 gi|237625406|gb|ACR02096.1| protein of unknown function DUF81 [Thauera sp. MZ1T]
          Length = 268

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 97/210 (46%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP+L+  F   G   S  +H+A+GTS+  I  TSV S   H   G +   +++     
Sbjct: 31  IMVPMLTTFFLAQGFPQSQVVHMALGTSMAAIVLTSVSSLRAHHARGAVRWDVVRAITPG 90

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + + T   + + + V    L   FA+F   + I ML   +    R+ P        G+  
Sbjct: 91  ILVGTFAATFIAARVSTVPLAIFFAVFMAYVSIQMLLNIKPKPARELPGALGMSAAGLGI 150

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  + +GGG  +   M +    +  A  TSA +   IA    +  + +GWG   +P 
Sbjct: 151 GGVSALVAIGGGSLSVPFMTWCNVKMQNAIGTSAAIGLPIALAGTVGYLVNGWGAPDMPA 210

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSY 256
            + G+V + A++++  +S    PL  KL++
Sbjct: 211 LTFGYVYLPALVLVSVVSTFFAPLGAKLAH 240


>gi|148265534|ref|YP_001232240.1| hypothetical protein Gura_3512 [Geobacter uraniireducens Rf4]
 gi|146399034|gb|ABQ27667.1| protein of unknown function DUF81 [Geobacter uraniireducens Rf4]
          Length = 263

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 9/214 (4%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VPVL+  F    + +   +H+A+GTSL  I  TS+ S   H   G ++  +++     
Sbjct: 28  VIVPVLTFIFTAQHLPEGHILHLALGTSLASIMFTSISSLRAHHGRGAVDWPVVRRISLG 87

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + + T   S + + +   FL   F +F   +   ML   +    R+ P     +  G + 
Sbjct: 88  IMVGTFGGSWVAAQLSTRFLKVFFVVFLYYVATQMLLNIKPKPHRQLPGQTAMFGVGGLI 147

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG--- 223
           G +S  +G+GGG  +   +++   +I++A  TSA     I FP  L     G+ +NG   
Sbjct: 148 GGVSSLVGIGGGSMSVPFLVWCNVAIHRAIGTSAA----IGFPIALAGAV-GYVVNGLSA 202

Query: 224 -LPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            LPP+SLGFV + A++ I   SI   P   KL++
Sbjct: 203 PLPPYSLGFVYLPALIGIAAASIATAPFGAKLAH 236


>gi|170725591|ref|YP_001759617.1| hypothetical protein Swoo_1229 [Shewanella woodyi ATCC 51908]
 gi|169810938|gb|ACA85522.1| protein of unknown function DUF81 [Shewanella woodyi ATCC 51908]
          Length = 264

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 1/227 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L      +G    I  HVA+ TSL  I  TS+ S   H R G I   I    +  L 
Sbjct: 31  VPALLILLPSIGFSSDILPHVAIATSLAAIILTSLSSAQAHHRRGNIPWPIFTTMLPGLI 90

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK-FPDNYVKYIWGMVTG 167
           + ++ +  +   +    L + FA F +LM I M+   R+  E K  P     ++  ++  
Sbjct: 91  LGSICSGFIAKMISAEQLQQIFAFFIILMAIQMVFPFRVAAENKPLPSTLFLFLTSVIIA 150

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            ++  +G+GGGI     + + G  +  A   S+     I+    L  + +GW ++GLP  
Sbjct: 151 IIAALMGIGGGILLIPFLSWCGLQMRNAIGFSSASGLFISLFGSLGYVVAGWQVSGLPSG 210

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +LG+V + A+L I+  S+L+ PL  + +       L   F++++  T
Sbjct: 211 TLGYVYLPALLGIVITSVLMAPLGVRAATHWPTPILKRVFALLLIVT 257


>gi|50084055|ref|YP_045565.1| hypothetical protein ACIAD0842 [Acinetobacter sp. ADP1]
 gi|49530031|emb|CAG67743.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter sp. ADP1]
          Length = 267

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 112/232 (48%), Gaps = 2/232 (0%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           LFGVGGGL+++P+L   F  +  D ++ MH+A+GTSL  I  TS+ S M H + G +   
Sbjct: 19  LFGVGGGLIIIPILYVVFTQLHYDPAVIMHMAVGTSLATIIVTSMSSVMAHHKRGAVLWS 78

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE--RKFPDN 156
           + K+    L + +++ + +   +   +L      F + +   M     +  +  ++ P  
Sbjct: 79  VFKNMAPGLVLGSLLGAGIADLLSGQYLQLIIGTFAIWVAFKMFTGANVKVDQSKQLPSR 138

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
            ++ + G   G  S   G+GGG  T   +   G  + KA ATSA     IA    L  ++
Sbjct: 139 AMQVLAGGGIGIASAIFGIGGGSLTVPYLNKNGVVMQKAVATSAACGLPIAVAGALGFMW 198

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            G+  +   P ++G+++I A + I  +S +   +  K+++ +    L   FS
Sbjct: 199 FGYHQHVSVPNAIGYIHIYAFIGISLMSFVTAKVGAKVAHQLSPAMLKKCFS 250


>gi|89072545|ref|ZP_01159117.1| hypothetical protein SKA34_18509 [Photobacterium sp. SKA34]
 gi|89051649|gb|EAR57102.1| hypothetical protein SKA34_18509 [Photobacterium sp. SKA34]
          Length = 267

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 95/189 (50%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           GI   + MH+A+ TSL  I  TS+ S   H + G I+  ++K     + +  +  S++  
Sbjct: 46  GIVSHLVMHIALATSLASIVMTSMASARNHFKLGNIDFSVVKILAPGIIVGGLGGSIVAE 105

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +   +L K FA+  L + I ML   ++   +  P+       G + G +S   G+GGG 
Sbjct: 106 IIPSDYLPKIFAVIVLCLAIQMLLSMKVINSKPLPNPLACVSSGGIIGLISSLAGIGGGS 165

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            T   + +YG  + +A  TS+ V  LIA   ++  IY+G G   LP +S+G+V + A+  
Sbjct: 166 LTVPYLSYYGIEMRRAIGTSSLVGFLIAVSGMIGFIYAGAGSEALPAFSVGYVYLPALFG 225

Query: 240 ILPISILIT 248
           I   S++ T
Sbjct: 226 IAATSMIAT 234


>gi|319637918|ref|ZP_07992684.1| hypothetical protein HMPREF0604_00307 [Neisseria mucosa C102]
 gi|317401073|gb|EFV81728.1| hypothetical protein HMPREF0604_00307 [Neisseria mucosa C102]
          Length = 269

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 122/259 (47%), Gaps = 15/259 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I  ++     +G ++GLFGVGGG ++VPV+  A QL G+ +     H+A+GTS  V+ 
Sbjct: 5   DIILALLAVGSAAGFIAGLFGVGGGTLVVPVVLWALQLQGVGNHPYAQHLAIGTSFAVMV 64

Query: 80  PTSVMS-FMEHRRHGTINMKILKDWIFVLPITT------VVTSLMISHVDKSFLNKAFAI 132
            T+  S + +H+++         DW  V  +T        + +    ++    L   F  
Sbjct: 65  FTTFSSMYAQHKKYAI-------DWATVRRMTPGMILGVFLGAATAKYMPTLALQVFFIA 117

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           F  L+ +  L+  +    R  P        G + G  S  +G+GGG  +   +L+     
Sbjct: 118 FLTLIALKTLRDSKPTPSRTLPALPGLTAAGTLFGAASSWVGIGGGSLSVPFLLYCNFPA 177

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           ++A  TS+G++  IA    +    +G  +  LP  + GF+ + AV I+   +IL  PL  
Sbjct: 178 HRAIGTSSGLAWPIAVAGTIGYFANGLPIANLPEGAAGFIYLPAVAILSIATILFAPLGV 237

Query: 253 KLSYMIGKKYLTIGFSMIM 271
           K ++ +  + L I F +++
Sbjct: 238 KTAHKLPARKLKIAFGIML 256


>gi|194098894|ref|YP_002001959.1| hypothetical protein NGK_1334 [Neisseria gonorrhoeae NCCP11945]
 gi|239999178|ref|ZP_04719102.1| hypothetical protein Ngon3_06825 [Neisseria gonorrhoeae 35/02]
 gi|240013914|ref|ZP_04720827.1| hypothetical protein NgonD_04568 [Neisseria gonorrhoeae DGI18]
 gi|240016356|ref|ZP_04722896.1| hypothetical protein NgonFA_04164 [Neisseria gonorrhoeae FA6140]
 gi|240080475|ref|ZP_04725018.1| hypothetical protein NgonF_04062 [Neisseria gonorrhoeae FA19]
 gi|240115913|ref|ZP_04729975.1| hypothetical protein NgonPID1_06659 [Neisseria gonorrhoeae PID18]
 gi|240121483|ref|ZP_04734445.1| hypothetical protein NgonPI_06898 [Neisseria gonorrhoeae PID24-1]
 gi|240123759|ref|ZP_04736715.1| hypothetical protein NgonP_07449 [Neisseria gonorrhoeae PID332]
 gi|240125950|ref|ZP_04738836.1| hypothetical protein NgonSK_06987 [Neisseria gonorrhoeae SK-92-679]
 gi|240128462|ref|ZP_04741123.1| hypothetical protein NgonS_07501 [Neisseria gonorrhoeae SK-93-1035]
 gi|260440272|ref|ZP_05794088.1| hypothetical protein NgonDG_04126 [Neisseria gonorrhoeae DGI2]
 gi|268595009|ref|ZP_06129176.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268596611|ref|ZP_06130778.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268601584|ref|ZP_06135751.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268682386|ref|ZP_06149248.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268684544|ref|ZP_06151406.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268686854|ref|ZP_06153716.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291043567|ref|ZP_06569283.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|193934184|gb|ACF30008.1| Conserved hypothetical integral membrane protein [Neisseria
           gonorrhoeae NCCP11945]
 gi|268548398|gb|EEZ43816.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268550399|gb|EEZ45418.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268585715|gb|EEZ50391.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268622670|gb|EEZ55070.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268624828|gb|EEZ57228.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268627138|gb|EEZ59538.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291012030|gb|EFE04019.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|317164465|gb|ADV08006.1| hypothetical protein NGTW08_1038 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 268

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +  T++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQTVDWKTIFAMMPGMIFGVFAGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   R    R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGRQTASRPLPGLPGLTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLVNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKESFGIML 256


>gi|262369273|ref|ZP_06062601.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262315341|gb|EEY96380.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 267

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 113/249 (45%), Gaps = 2/249 (0%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G  +GLFGVGGGL+++P+L   F  +  D S+ MH+A+GTSL  I  TS+ S   H +
Sbjct: 12  IAGFAAGLFGVGGGLIIIPILYVVFTHLNYDPSVIMHMAVGTSLATIIVTSMSSVSAHHK 71

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE- 150
            G +   + ++    L +   + + +  ++    L      F + +   M     +  + 
Sbjct: 72  RGAVLWSVFRNLAPGLVMGAFLGAGIADYMSGHGLQLLIGFFAVWVAYKMFSGAHIEVDP 131

Query: 151 -RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
            R+ P    +   G   G  S   G+GGG  T   +  +G  + KA ATSA     IA  
Sbjct: 132 SRQLPSTGKQLFVGAGIGVASAIFGIGGGSLTVPYLNRHGVVMQKAVATSAACGLPIAVA 191

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             L  ++ G       P ++G++++ A   I  +S +      K+++++    L   FS 
Sbjct: 192 GALGFMWFGHQAEVNVPNTIGYIHVYAFFGIALMSFITAKFGAKVAHLLSPAMLKKCFSG 251

Query: 270 IMFTTSFVF 278
           ++      F
Sbjct: 252 LLVVVGLYF 260


>gi|283851886|ref|ZP_06369163.1| protein of unknown function DUF81 [Desulfovibrio sp. FW1012B]
 gi|283572802|gb|EFC20785.1| protein of unknown function DUF81 [Desulfovibrio sp. FW1012B]
          Length = 267

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 93/207 (44%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L   F   G      M +A+GTSL  IA TS+ S   H   G +   ++K     + I
Sbjct: 34  PALVWFFTAQGFPAETIMQMALGTSLAAIAFTSISSCRAHHCRGAVLWPVVKRITPGILI 93

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T   + + + +   FL   F  F   + + ML   R    R+ P        G   G +
Sbjct: 94  GTFAGTCLAARLSTGFLKGFFVCFLYYVSVQMLLNIRPKPTRQIPGGPGMSAMGFAIGAV 153

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   +++    I+ A  TSA +   IA    +  I +G G   LPP S 
Sbjct: 154 SSLVGIGGGTMSVPFLVWCNVPIHMAVGTSAAIGFPIAVAGSVGYIVNGLGAANLPPLSF 213

Query: 230 GFVNIGAVLIILPISILITPLATKLSY 256
           G+V++ A++ +  +SIL  P   +L++
Sbjct: 214 GYVSLPALVGVAAVSILTAPYGARLAH 240


>gi|304312465|ref|YP_003812063.1| hypothetical protein HDN1F_28370 [gamma proteobacterium HdN1]
 gi|301798198|emb|CBL46420.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 263

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 99/221 (44%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           AF   GI +++  H+A+GTSL  I  TS+ S  +H R   +   +       L I  V+ 
Sbjct: 37  AFHWQGISENVLTHMAIGTSLATILMTSLGSIRQHHRAHAVRWSVAGTLSIGLVIGAVMG 96

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALG 174
           +     +    +   FAIF L +   ML   +    R+ P        G V GF S   G
Sbjct: 97  AWFADSLKGRVIQILFAIFALFVAAKMLFGSKPQASRQLPSISGMVGAGGVIGFASAIFG 156

Query: 175 VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           +GGG  T   +++    + +A  TSA     IA       +++GW    LPP+S G++ +
Sbjct: 157 IGGGSLTVPFLVWCNLRMQEAVGTSAACGFPIALAGASAFVWTGWMAADLPPYSFGYLYL 216

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            A++ I   S+    +  ++++ +    L   F++++   S
Sbjct: 217 PALVGIAITSVPFAQVGARMAHRLPAATLKKVFAVLLVAAS 257


>gi|89093747|ref|ZP_01166693.1| hypothetical protein MED92_04594 [Oceanospirillum sp. MED92]
 gi|89081877|gb|EAR61103.1| hypothetical protein MED92_04594 [Oceanospirillum sp. MED92]
          Length = 266

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 97/230 (42%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL  +F+L G+   +  H A+ TSL  I  TS+ S + H + G +   I K     + 
Sbjct: 31  VPVLVFSFELQGMSPDVLTHAAVATSLATIVATSISSTLAHNKKGAVRWDIFKPVTLGIL 90

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           +   +       +   +L      F +L+ I M    +        +N    I G   G+
Sbjct: 91  LGAFLGVKTAGLMTGEWLQITLGCFVILVAIQMALNLKPDAGETAVNNKDLAIAGGFIGW 150

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS   G+GGG  +     +    + +A ATSA     IA    L  I+ GW    +P WS
Sbjct: 151 LSSIFGIGGGTLSVPYFTWRRVQMQQAVATSAACGLPIALMGALTNIWEGWQNPAMPEWS 210

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            GF+ + A+L I+  S +      KL++ +    L   F++ +      F
Sbjct: 211 AGFIYLPALLGIVLTSSIFAKYGAKLAHRLPAPVLKRIFAVFLLCVGLRF 260


>gi|254509419|ref|ZP_05121500.1| thymidylate synthase [Vibrio parahaemolyticus 16]
 gi|219547656|gb|EED24700.1| thymidylate synthase [Vibrio parahaemolyticus 16]
          Length = 264

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 99/207 (47%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     + GID +I M +A+ TSL  I  TS  S   H + G ++M ++K  +  + 
Sbjct: 33  VPALMFLLPMAGIDANIAMQMALATSLASIIVTSGSSAYNHFKLGNVDMFVVKWLMPGVV 92

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           I   + + +   V   +L K F +  L + I ML   R   +R  P++ V    G   G 
Sbjct: 93  IGGFLGANVAEWVPSQYLPKVFGVIVLCLSIQMLFSIRGKTQRSMPNSSVTMAIGAGIGM 152

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S   G+GGG  +   +  +G  + KA  +S+     IA   +L  I  G+    LP +S
Sbjct: 153 VSSLAGIGGGSLSVPFLNRHGIEMRKAVGSSSVCGCFIALSGMLGFILHGYKAEVLPAYS 212

Query: 229 LGFVNIGAVLIILPISILITPLATKLS 255
           LG+V + A++ I   S+L T    +L+
Sbjct: 213 LGYVYLPALVGITATSMLTTRFGARLA 239


>gi|254361201|ref|ZP_04977345.1| hypothetical protein MHA_0784 [Mannheimia haemolytica PHL213]
 gi|261492937|ref|ZP_05989482.1| putative permease [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261495080|ref|ZP_05991546.1| putative permease [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|153092692|gb|EDN73741.1| hypothetical protein MHA_0784 [Mannheimia haemolytica PHL213]
 gi|261309246|gb|EEY10483.1| putative permease [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261311389|gb|EEY12547.1| putative permease [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 262

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 10/194 (5%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     + G+     M  A+GTS   I  T+  S   H + G ++++  K +I  L 
Sbjct: 30  VPSLVFLLPMAGVPPEYIMSTALGTSFSTIIITAFASAQRHHKLGNVDIQTSKYFIPALM 89

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN-----YVKYIWG 163
           ++  ++ L++S +D   +++ FA+      +L L    ++  ++ P N         I G
Sbjct: 90  VSVFLSGLVVSRLDPQLMSRIFAVM-----VLYLAGKMIFSIKRAPKNKPLTVQTTIIGG 144

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            + G L+   G+ GG F    +   G  + +A  TS+   A +     +  I SGWGL G
Sbjct: 145 SIIGALASMAGIAGGAFIVPFLNDRGLEMKRAIGTSSFCGAFLGLSGTISFIVSGWGLEG 204

Query: 224 LPPWSLGFVNIGAV 237
           +P +SLG+V + A+
Sbjct: 205 MPDYSLGYVYLPAL 218


>gi|294677315|ref|YP_003577930.1| hypothetical protein RCAP_rcc01778 [Rhodobacter capsulatus SB 1003]
 gi|294476135|gb|ADE85523.1| protein of unknown function DUF81, transmembrane [Rhodobacter
           capsulatus SB 1003]
          Length = 271

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 98/209 (46%), Gaps = 3/209 (1%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
           F  +G      M V + TS+  I  TS  S   H R G ++ ++L+DW   +    ++  
Sbjct: 44  FNGLGYGSEGLMQVCVATSMATIIITSTRSVTAHARKGAVDWQLLRDWAPAVAGGALLGV 103

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALG 174
            +++ +D   L   F    + + + M   +         P    +  +G + G +S  LG
Sbjct: 104 FLVTRLDTHALTIIFGTLVMAIALYMAFGKQSWRIAEGMPGRGFRLWFGPLMGAVSVLLG 163

Query: 175 VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           +GGG  +  +   +G  I++A ATSAG  A++A P+    + +   +   PP++LG +NI
Sbjct: 164 IGGGSISTPMQTLHGIPIHRAVATSAGFGAIMAVPSTAAFLLT--PVENAPPYTLGAINI 221

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYL 263
            A+++I   +++       L++ +  K L
Sbjct: 222 PALVVIGATTVVTAAWGAALAHRLDPKPL 250


>gi|90580570|ref|ZP_01236375.1| hypothetical protein VAS14_07569 [Vibrio angustum S14]
 gi|90438228|gb|EAS63414.1| hypothetical protein VAS14_07569 [Photobacterium angustum S14]
          Length = 267

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 95/189 (50%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           GI   + MH+A+ TSL  I  TS+ S   H + G I+  ++K     +    +  S++  
Sbjct: 46  GIASHLVMHIALATSLASIVMTSMASARNHFKLGNIDFSVVKTLAPGIIAGGLGGSVVAE 105

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +   +L K FA+  L + I ML   ++   +  P++      G + G +S   G+GGG 
Sbjct: 106 IIPSHYLPKIFAVIVLCLAIQMLLSMKVINNKPLPNSLACVSSGGIIGLISSLAGIGGGS 165

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            T   + +YG  + +A  T++ V  LIA   ++  IY+G G   LP +S+G+V + A+  
Sbjct: 166 LTVPYLSYYGIEMRRAIGTASLVGFLIAVSGMIGFIYAGVGSESLPAFSVGYVYLPALFG 225

Query: 240 ILPISILIT 248
           I   S++ T
Sbjct: 226 IAATSMIAT 234


>gi|261856150|ref|YP_003263433.1| hypothetical protein Hneap_1556 [Halothiobacillus neapolitanus c2]
 gi|261836619|gb|ACX96386.1| protein of unknown function DUF81 [Halothiobacillus neapolitanus
           c2]
          Length = 263

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 9/229 (3%)

Query: 48  MVPVLSKAFQLMGIDDSICM-HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD-WIF 105
           +VPVL   F L+G+ DS  + H+A+GTSL  I  +S+ S   H +    N  +L D +I 
Sbjct: 29  VVPVLLFLFPLIGLGDSPHLVHLAIGTSLATILFSSMASIYTHHK----NKGVLWDVFIR 84

Query: 106 VLP---ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW 162
           + P   I +++ S +   +    L K F +  +L+ + M         R  P       +
Sbjct: 85  IAPGIVIGSILGSTIAHLLPGEILKKVFGVLEILIALQMAFGRNPAPTRTLPSGVPLSFF 144

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           G+  G +   +G+GGG  T    ++   +   A ATSA +    A    +  I +GWG  
Sbjct: 145 GVSVGAVGTIMGMGGGALTTPFFMWCNVAARNAMATSAAIGLPNALAGAIGYIVTGWGQP 204

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            LP WS+G++ + A+L I+  S+   P+   L++ +  K L   F++++
Sbjct: 205 DLPSWSIGYIYLPALLGIVIPSLFFAPIGATLTHRLPAKLLKRFFAIML 253


>gi|260775161|ref|ZP_05884059.1| hypothetical protein VIC_000532 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608862|gb|EEX35024.1| hypothetical protein VIC_000532 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 263

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 8/212 (3%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP L     + GID +I M +A+ TSL  I  TS  S   H + G ++M ++K W+  +
Sbjct: 31  VVPALLFLLPMAGIDPAISMQIALATSLASIIVTSGSSAFNHFKLGNVDMYVVK-WL--M 87

Query: 108 PITTVVTSLMISHVDK----SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG 163
           P   VV   + ++V +     +L K F +  L + + ML   +   ++  P N      G
Sbjct: 88  P-GVVVGGFLGANVAEWIPSQYLPKVFGVIVLCLAVQMLFSIKRKSQKIMPGNSATVAIG 146

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
              G +S   G+GGG  +   +  +G  + KA  +S+     IA   ++  I  G+    
Sbjct: 147 TGIGMVSSLAGIGGGSLSVPFLNRHGIEMRKAVGSSSVCGCFIAISGMIGFILHGYQAQS 206

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           LP +SLG+V + A++ I   S+L T +  KL+
Sbjct: 207 LPAYSLGYVYVPALIAIASTSMLTTRIGAKLA 238


>gi|257464533|ref|ZP_05628904.1| permease [Actinobacillus minor 202]
 gi|257450193|gb|EEV24236.1| permease [Actinobacillus minor 202]
          Length = 263

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 102/223 (45%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     L G+     M  A+GTS   I  T+  S   H + G ++  + K +I  + 
Sbjct: 31  VPSLVYLLPLAGVSPEHLMSAALGTSFSTIVITAFSSAQRHHKLGNVDWNVSKVFIPSIM 90

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           I+  +  L+IS +D   ++K FA+  + + + M+   +   + K        I G + G 
Sbjct: 91  ISVFLCGLIISGLDAKLMSKLFAVMVVYLALRMIFSLQKEQKIKPLTTQTTVIAGGIIGA 150

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS   G+GGG F    +   G  + +A  TS+   A +        I SGW + GLP +S
Sbjct: 151 LSSVAGIGGGAFIVPFLNGRGLEMKRAIGTSSFCGAFLGLSGTFSFIASGWNVEGLPDYS 210

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           LG+V + A+L I   S   + L    + ++    L   F++++
Sbjct: 211 LGYVYLPALLGITLTSYFTSKLGANAANVLPVATLKKAFAVML 253


>gi|297569567|ref|YP_003690911.1| protein of unknown function DUF81 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925482|gb|ADH86292.1| protein of unknown function DUF81 [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 263

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 111/231 (48%), Gaps = 10/231 (4%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L  A    G+     MH+A+GTS+  I  T+V S + H R G +  ++++  +  +  
Sbjct: 32  PMLVFALAWQGVAPEYLMHLALGTSMATIIFTAVSSALAHHRRGAVRWEVVRGIVPGILA 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T+  + + + +   FL   FA F   +   ML   +    R+ P        G   G  
Sbjct: 92  GTLGGTFIAAALSTDFLQIFFAFFLYFVAWQMLSGRKPNPARELPGPAGMLGAGGTIGVF 151

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG-----L 224
           S  +G+GGG  +   M++    +++A  TSA     I FP + V   +G+ LNG     L
Sbjct: 152 SSLVGIGGGTLSVPFMVWCNIGLHQAIGTSAA----IGFP-IAVAGTAGYLLNGLRAPAL 206

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           P ++LGF+ + A++ I+  S+L  PL  +L++ +    L   F++++   +
Sbjct: 207 PEYALGFIYLPALVGIVAASVLTAPLGVRLAHSLPVNKLKRIFALLLLAVA 257


>gi|302877552|ref|YP_003846116.1| hypothetical protein Galf_0307 [Gallionella capsiferriformans ES-2]
 gi|302580341|gb|ADL54352.1| protein of unknown function DUF81 [Gallionella capsiferriformans
           ES-2]
          Length = 263

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 95/201 (47%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
           F          +H+A+GTS+  I  T++ S  +H +H  ++  +++     + I T + S
Sbjct: 35  FDAQQFPPEHLLHLALGTSMATIIFTALASLYKHHQHRAVDWNVVRTITPGILIGTGLGS 94

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGV 175
           L+ + +   F+   FA+F       +L   R    R+ P   +  ++G+  G LS  + +
Sbjct: 95  LLATSIPTHFVGILFALFVYFAAAQILFDLRPPVSRQLPGKLIIRLFGVFAGTLSSLVSI 154

Query: 176 GGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           GGG      +L    SI  A  TSA +S  +A    +  + +G   +GLPP SLG+V + 
Sbjct: 155 GGGTVVIPFLLRSNLSIRHAIGTSAAISFPVAIGGTIGYVATGLNASGLPPLSLGYVYLP 214

Query: 236 AVLIILPISILITPLATKLSY 256
            +L     S++  PL  K ++
Sbjct: 215 CLLWTAAASVITAPLGAKAAH 235


>gi|254491996|ref|ZP_05105174.1| conserved domain protein, putative [Methylophaga thiooxidans
           DMS010]
 gi|224462811|gb|EEF79082.1| conserved domain protein, putative [Methylophaga thiooxydans
           DMS010]
          Length = 263

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 17/219 (7%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L   F    +   + +HVA+GTSL  I+ TS+ S   H R+GTI      DWI V  
Sbjct: 30  VPILLLVFSWQTMSADVAIHVAIGTSLMTISLTSLSSMRAHHRYGTI------DWILVRK 83

Query: 109 IT------TVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW 162
           +T      ++  +++ +++   +L   F  F LLM   M          K   +     +
Sbjct: 84  LTPGLVVGSISGAVIAANLSSQWLQSFFGAFALLMATRMWLPSPNTLSPKLLAHSGMSAY 143

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           G++TG +S  +G+GGG      ++  G  I +A  T+A     IA   ++  I+ G    
Sbjct: 144 GLLTGVISAMVGIGGGTLVVPYLVMAGQQIQRAVGTAAACGFPIAVSGVIGFIWMGLSQQ 203

Query: 223 -GLPPWSLGFVNIGAVLIILPISILITP----LATKLSY 256
                W  GFV+  A L I+  SI + P    +A KLS+
Sbjct: 204 TNTSSWQTGFVHWQAFLGIISTSIFMAPVGAIMAKKLSH 242


>gi|85710657|ref|ZP_01041721.1| hypothetical protein NAP1_09607 [Erythrobacter sp. NAP1]
 gi|85687835|gb|EAQ27840.1| hypothetical protein NAP1_09607 [Erythrobacter sp. NAP1]
          Length = 291

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 105/224 (46%), Gaps = 12/224 (5%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VP L     LMG+      HVA+GTSL  I  TSV S M H    +++  +LK W   
Sbjct: 54  VVVPALVFLLPLMGVSAEQTAHVAVGTSLATIIFTSVRSTMSHAARDSVDFDLLKGWALW 113

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + + T   + +   V  + L   F +     G+L      L   R     +     G+  
Sbjct: 114 VVLGTFAGAWIADFVSGAQLAMIFGV-----GVLGFAFYFLLPARAAEPMFAGMPAGIPR 168

Query: 167 GFLSGALGV-------GGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
             ++G LG        GGG  T L M   GA I++A  T+AG+ A+IA P  +     G+
Sbjct: 169 AGIAGTLGAFSALLGIGGGTLTTLTMTVCGAPIHRAIGTAAGMGAIIAIPGAIGFAIIGF 228

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           G  GLP  SLG+VN+ A L I+  SI+  PL   +++ +  + L
Sbjct: 229 GETGLPWGSLGYVNLPAALGIIVTSIIFAPLGVAVAHNLAPQVL 272


>gi|90412455|ref|ZP_01220458.1| hypothetical protein P3TCK_13823 [Photobacterium profundum 3TCK]
 gi|90326492|gb|EAS42898.1| hypothetical protein P3TCK_13823 [Photobacterium profundum 3TCK]
          Length = 267

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 4/222 (1%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP L     L  ID+S+ MH+A+ TSL  I  TS  S   H + G I+  I+K     +
Sbjct: 34  VVPALVWLLPLASIDNSLVMHMALATSLASIVLTSGASARNHIKLGNIDFSIVKSMAPGI 93

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            +  +  S++   V    L K FA   LL+ + ML   R+   R  P        G V G
Sbjct: 94  VLGGLGGSIIAEMVPTELLPKIFASIVLLLALQMLLSMRMTSHRPIPSPMACACSGGVIG 153

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S   G+GGG  T   + ++G  + +A   ++   A+IA   ++  I+SG     LPP 
Sbjct: 154 VISSLAGIGGGSLTVPYLSWHGVEMRRAIGCASLSGAIIAVAGMVGFIFSGLNEAALPPM 213

Query: 228 SLGFVNIGAVLIILPISILIT----PLATKLSYMIGKKYLTI 265
           S+G+V + A++ I+  S++ T     L ++L  M  KK   +
Sbjct: 214 SIGYVYLPALIGIVSTSVITTRYGAALVSRLPTMTLKKIFAV 255


>gi|254673120|emb|CBA07877.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
 gi|308389437|gb|ADO31757.1| hypothetical protein NMBB_1455 [Neisseria meningitidis alpha710]
          Length = 268

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFTMMPGMVFGVFAGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   R    R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGRQTASRPLPKLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKKSFGIML 256


>gi|226942130|ref|YP_002797204.1| hypothetical protein LHK_03217 [Laribacter hongkongensis HLHK9]
 gi|226717057|gb|ACO76195.1| DUF81 domain containing protein [Laribacter hongkongensis HLHK9]
          Length = 267

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 1/225 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++VP +    +  G+   +  H+A+GTSL V+  TS  S   H   G ++  I+K     
Sbjct: 31  IIVPAMVWVLEAAGVTHQV-QHLALGTSLAVMVFTSFASVRAHHARGAVDWSIVKRMAPA 89

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + +  +V S +   +    L   F ++  ++ + ML   +    R  P     +  G V 
Sbjct: 90  MIVGMLVGSQIAGWIPSHDLKWFFVVYAYVIALQMLADKKPQGGRPLPGPLGLWSSGGVI 149

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  +G+GGG  +   M +    + +A ATSA +   IA    +  + SGW    LPP
Sbjct: 150 GVISSFVGIGGGSMSVPFMSWCNVPMPRAIATSAALGWPIAVAGAVGYVISGWHAPDLPP 209

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            ++GFV +  +L +  +++L+ P   +L++ +    L   F+ +M
Sbjct: 210 GAVGFVYLPGLLALSVVTVLVAPQGARLAHRLPVSRLKKVFAGLM 254


>gi|88603192|ref|YP_503370.1| hypothetical protein Mhun_1940 [Methanospirillum hungatei JF-1]
 gi|88188654|gb|ABD41651.1| protein of unknown function DUF81 [Methanospirillum hungatei JF-1]
          Length = 269

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 111/208 (53%), Gaps = 14/208 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L+GLFG+GGG+VMVPV+      +G DD+  M +A+ TS  VI PT+V   +++  
Sbjct: 17  VAGFLAGLFGIGGGVVMVPVMFFLLNDLGYDDN-AMAIAVATSAAVILPTAVAGAIKN-- 73

Query: 92  HGTINMKILKDW-IFVLPITTVVTSLMISHVDKSFLNK----AFAIFCLLMGILML-KRD 145
               + K +  W   +L    ++ S+  S +     ++    AF+ F + M + M+ K+ 
Sbjct: 74  ---FSGKQITWWPALILGFGGILGSMAGSTLSVLIPSQVHILAFSGFLIFMAVWMIIKQC 130

Query: 146 RLYCERKFPD-NYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVS 203
           R  C     + +++  I G+  G  SG  G+GGG I T +L    G +I+K+   S    
Sbjct: 131 RYLCAYAVRETDFILLILGIGVGVASGLFGIGGGVILTPVLTSILGMNIHKSIGISLTAM 190

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGF 231
            LIA   ++  I  GWG+ GL P+S+G+
Sbjct: 191 VLIASGTVVSYIVLGWGVTGLFPFSIGY 218


>gi|51244235|ref|YP_064119.1| hypothetical protein DP0383 [Desulfotalea psychrophila LSv54]
 gi|50875272|emb|CAG35112.1| conserved hypothetical membrane protein [Desulfotalea psychrophila
           LSv54]
          Length = 262

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 101/212 (47%)

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
           +     +HVA+GTSL  I  TS+ S   H + G +   ++      + + T   + + S 
Sbjct: 40  VPPEYLLHVALGTSLASIICTSLSSLWAHHKRGAVLWPVVGRITPGILVGTFFGAWVASQ 99

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
           +  +FL   F +F L +   ML   R    R  P     +  G V G  S  +G+GGG  
Sbjct: 100 LSTTFLKVFFGVFLLYVATQMLLSIRPNASRDLPGTVGIFGAGSVIGTFSSLVGIGGGTL 159

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
           +   +++   ++++A  TSA +   IA       I +G  ++GLP  + GFV++ A+  I
Sbjct: 160 SVPFLVWNNIAMHQAIGTSAAIGLPIALAGSAGYIVNGLMVSGLPAGTFGFVHLTALAGI 219

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           +  S+   PL  +L++ +    L   FSM+++
Sbjct: 220 VLTSVCTAPLGARLAHSLPVAKLKKIFSMLLY 251


>gi|304387373|ref|ZP_07369565.1| protein of hypothetical function DUF81 [Neisseria meningitidis ATCC
           13091]
 gi|304338624|gb|EFM04742.1| protein of hypothetical function DUF81 [Neisseria meningitidis ATCC
           13091]
          Length = 268

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFAMMPGMIFGVFTGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L  D     R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTDPQTASRPLPGLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKKSFGIML 256


>gi|218768339|ref|YP_002342851.1| hypothetical protein NMA1533 [Neisseria meningitidis Z2491]
 gi|121052347|emb|CAM08679.1| conserved hypothetical integral membrane protein [Neisseria
           meningitidis Z2491]
 gi|254670718|emb|CBA06902.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
 gi|319410585|emb|CBY90954.1| conserved hypothetical integral membrane protein [Neisseria
           meningitidis WUE 2594]
 gi|325130391|gb|EGC53156.1| putative membrane protein [Neisseria meningitidis OX99.30304]
 gi|325136178|gb|EGC58786.1| putative membrane protein [Neisseria meningitidis M0579]
 gi|325201971|gb|ADY97425.1| putative membrane protein [Neisseria meningitidis M01-240149]
 gi|325205909|gb|ADZ01362.1| putative membrane protein [Neisseria meningitidis M04-240196]
 gi|325208278|gb|ADZ03730.1| putative membrane protein [Neisseria meningitidis NZ-05/33]
          Length = 268

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFTMMPGMVFGVFAGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L  D     R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTDPQTASRPLPGLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKKSFGIML 256


>gi|316984120|gb|EFV63098.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
 gi|325140457|gb|EGC62978.1| putative membrane protein [Neisseria meningitidis CU385]
 gi|325200056|gb|ADY95511.1| putative membrane protein [Neisseria meningitidis H44/76]
          Length = 268

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFTMMPGMIFGVFTGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L  D     R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTDPQTASRPLPGLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKKSFGIML 256


>gi|89901404|ref|YP_523875.1| hypothetical protein Rfer_2628 [Rhodoferax ferrireducens T118]
 gi|89346141|gb|ABD70344.1| protein of unknown function DUF81 [Rhodoferax ferrireducens T118]
          Length = 272

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 1/225 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP ++      G+  ++ + +A+ TS+  I  TSV S   H + G +   +++     + 
Sbjct: 34  VPFITIILSGRGVSPNLAVKMAIATSMATILFTSVSSVRAHHKRGAVRWDLVRGLAPGIL 93

Query: 109 ITTVVTSLMI-SHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
           +   V SL + + +  S+L   FA F       M    +    R+ P        G V G
Sbjct: 94  LGGAVASLGVFALLKGSWLALFFAAFVSFSATQMFLDKKPAPTRQVPGTAGLIGAGGVIG 153

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           FLSG +G GGG  +   M +   +I+ A ATSA +   IA   ++  +  G  +  LPP+
Sbjct: 154 FLSGLVGAGGGFVSVPFMTWCNVAIHNAVATSAALGFPIALANVVGYVIGGQDVQNLPPY 213

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           S G++ + A+ +I   S+L  PL  + ++ +  K L   F+ I++
Sbjct: 214 SFGYIWLPAMGVIASCSVLTAPLGARAAHTLPVKQLKRVFASILY 258


>gi|319941709|ref|ZP_08016031.1| hypothetical protein HMPREF9464_01250 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804642|gb|EFW01509.1| hypothetical protein HMPREF9464_01250 [Sutterella wadsworthensis
           3_1_45B]
          Length = 271

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 2/225 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+      GI     +HVA+ TS+G I  TS+ S   H + G +   ++      + +
Sbjct: 33  PFLTLLLGYAGIPIEHIVHVAIATSMGTILFTSLSSVRAHAKRGAVLWNVVFSMAPGILV 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
             VV + +   +   ++   FA+F       M    +    R  P     +  G   G +
Sbjct: 93  GAVVGAQVSGALPTFWVALIFAVFVYTSAAKMFLNAKPTPSRHLPGPAGMFGAGTAIGVI 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP--PW 227
           S  +G GGG  +   M +    ++ A  TSA     IAF   +  I SGW L GLP  P+
Sbjct: 153 SALVGAGGGFISVPFMTWCNVKMHNAVGTSAAFGFPIAFAGTIGYIISGWHLTGLPGWPY 212

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           ++G++++ A++ +   SI   P   K+++ I  K L   F+ ++F
Sbjct: 213 TIGYIHLPALVCVAATSIFFAPFGAKVAHSIDTKPLKRIFASVLF 257


>gi|121611675|ref|YP_999482.1| hypothetical protein Veis_4771 [Verminephrobacter eiseniae EF01-2]
 gi|121556315|gb|ABM60464.1| protein of unknown function DUF81 [Verminephrobacter eiseniae
           EF01-2]
          Length = 241

 Score = 75.9 bits (185), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 1/229 (0%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++MVP ++       +   + + +A+ TS+  I  TS+ S   H R G +   I++    
Sbjct: 1   MLMVPFMTYILGTQQVAPDLAVKMAIATSMATIVFTSISSVRAHHRRGAVRWDIVRRLAP 60

Query: 106 VLPITTVVTSLMISHVDK-SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM 164
            + +  +  SL +  + K +FL   FA+F       M    +    R  P    +   G 
Sbjct: 61  GIVLGGLGASLGVFALLKGAFLAIFFALFVSFSATQMFLDKKPAPTRHLPGAAGQVAAGG 120

Query: 165 VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
           V GFLSG +G GGG  +   M +    I+ A A+SA +   IA   +L  + SG  ++GL
Sbjct: 121 VIGFLSGLVGAGGGFVSVPFMTWCNVPIHNAVASSAALGFPIALANVLGYVISGQHISGL 180

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
           P  SLG++ + A+ +I   S+   PL  K ++ +  + L   F+ ++F 
Sbjct: 181 PAASLGYIWLPALAVIAACSVFTAPLGAKAAHKLPVRQLKRVFASLLFA 229


>gi|59801016|ref|YP_207728.1| hypothetical protein NGO0585 [Neisseria gonorrhoeae FA 1090]
 gi|240113157|ref|ZP_04727647.1| hypothetical protein NgonM_06221 [Neisseria gonorrhoeae MS11]
 gi|254493950|ref|ZP_05107121.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268599237|ref|ZP_06133404.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|293398879|ref|ZP_06643044.1| hypothetical protein NGNG_00062 [Neisseria gonorrhoeae F62]
 gi|59717911|gb|AAW89316.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|226512990|gb|EEH62335.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268583368|gb|EEZ48044.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|291610293|gb|EFF39403.1| hypothetical protein NGNG_00062 [Neisseria gonorrhoeae F62]
          Length = 268

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTIFAMMPGMIFGVFAGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   R    R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGRQTASRPLPGLPGLTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLVNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKESFGIML 256


>gi|160874382|ref|YP_001553698.1| hypothetical protein Sbal195_1263 [Shewanella baltica OS195]
 gi|160859904|gb|ABX48438.1| protein of unknown function DUF81 [Shewanella baltica OS195]
 gi|315266617|gb|ADT93470.1| protein of unknown function DUF81 [Shewanella baltica OS678]
          Length = 266

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 115/234 (49%), Gaps = 2/234 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V +ICL + A    G ++GL G+GGGL++VP L      +GI  +   H+A+ TSL  I 
Sbjct: 7   VFFICLALGA--FVGFMAGLLGIGGGLIVVPALLYILPSVGISSAQLPHIAIATSLAAII 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ S   H + G I   + K  +  + +  + +  +   +  + L + FAIF +LM I
Sbjct: 65  LTSISSTRAHHKRGNIPWDLFKTMLPGIILGALTSGFIAERISAAALQQGFAIFVVLMSI 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M    +    R+ P   + ++   +   ++G +G+GGG+     + F+G  +  A   S
Sbjct: 125 QMAYPFKAESNRELPSAPILFVVAALVAMIAGLMGIGGGVLLVPFLTFFGLQMRYAVGFS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           A    LI+       I +G     LP  +LGF+ + A+  ++  S+L+ P+  K
Sbjct: 185 AATGLLISLSGSFGYIIAGLNAPELPYGTLGFIFLPALFGLVITSVLMAPVGVK 238


>gi|59711065|ref|YP_203841.1| hypothetical protein VF_0458 [Vibrio fischeri ES114]
 gi|59479166|gb|AAW84953.1| hypothetical protein VF_0458 [Vibrio fischeri ES114]
          Length = 267

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 99/208 (47%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP L       GID SI M +A+GTSL  I  TS  S + H R G + + +++     +
Sbjct: 34  VVPALLWLLPQAGIDSSIVMQMALGTSLATIILTSTSSALNHLRLGNVEVALIRSLAPGV 93

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
                + S +   +   +L K F +  LL+ + ML   +L   R  P        G V G
Sbjct: 94  IAGGFLGSYVAELIPSQYLPKVFGVIVLLLALQMLLALKLTATRTLPSPLKIAASGSVIG 153

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S   G+GGG  T   + F+G  + KA  +S+    LIA   ++  I  G  +  LPP 
Sbjct: 154 IVSSLAGIGGGSLTVPYLSFHGIEMRKAIGSSSLCGTLIALAGMIGFILHGVQVTNLPPM 213

Query: 228 SLGFVNIGAVLIILPISILITPLATKLS 255
           SLG+V + A+  I   SIL T +  KL+
Sbjct: 214 SLGYVYLPALCGIGVTSILTTRIGAKLT 241


>gi|91776589|ref|YP_546345.1| hypothetical protein Mfla_2237 [Methylobacillus flagellatus KT]
 gi|91710576|gb|ABE50504.1| protein of unknown function DUF81 [Methylobacillus flagellatus KT]
          Length = 263

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 105/226 (46%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VP+L   F  +       MH+A+GTSL  I  TS+ S   H R   ++   ++     
Sbjct: 27  VIVPILVFIFTSLAFPPQHIMHIALGTSLATIIVTSISSARAHHRKQNVHWSAVRLIAPG 86

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + I T++ +++   +D   L   FA+F LL+   M+        R+ P        G + 
Sbjct: 87  IVIGTLLGAVLAGQLDTVILKVIFAVFVLLIATQMVLNFTPAPHRQLPGRAGTLSMGGII 146

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G LS  +G+GGG  +   +++   +   A  TSA +   IA    L  I +G     LP 
Sbjct: 147 GVLSSLVGIGGGSLSVPFLIYCNFNARYAIGTSAAIGLPIAVAGTLGFIITGLSQGNLPA 206

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           +SLG+V + A   I   S+L  P    L++ +  + L   F+++++
Sbjct: 207 YSLGYVYLPAFAGIALASMLTAPFGAYLAHKLPVQVLKKLFALLLY 252


>gi|261392401|emb|CAX49943.1| conserved hypothetical integral membrane protein [Neisseria
           meningitidis 8013]
 gi|325142511|gb|EGC64912.1| putative membrane protein [Neisseria meningitidis 961-5945]
 gi|325198469|gb|ADY93925.1| putative membrane protein [Neisseria meningitidis G2136]
          Length = 268

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFAMMPGMIFGVFTGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L  D     R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTDPQTASRPLPGLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKKSFGIML 256


>gi|254805118|ref|YP_003083339.1| hypothetical protein NMO_1159 [Neisseria meningitidis alpha14]
 gi|254668660|emb|CBA06336.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
          Length = 268

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFAMMPGMIFGVFTGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L  D     R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTDPQTASRPLPGLPGLTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKKSFGIML 256


>gi|121635030|ref|YP_975275.1| hypothetical protein NMC1256 [Neisseria meningitidis FAM18]
 gi|120866736|emb|CAM10489.1| conserved hypothetical integral membrane protein [Neisseria
           meningitidis FAM18]
 gi|325132482|gb|EGC55175.1| putative membrane protein [Neisseria meningitidis M6190]
 gi|325138256|gb|EGC60825.1| putative membrane protein [Neisseria meningitidis ES14902]
          Length = 268

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKRAVDWKTVFAMMPGMIFGVFTGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   R    R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGRQTASRPLPKLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKKSFGIML 256


>gi|260771143|ref|ZP_05880070.1| hypothetical protein VFA_004208 [Vibrio furnissii CIP 102972]
 gi|260613740|gb|EEX38932.1| hypothetical protein VFA_004208 [Vibrio furnissii CIP 102972]
          Length = 259

 Score = 75.5 bits (184), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 10/223 (4%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L     L GI   I M +A+ TSL  I  TS  S + H + G ++M ++K W+  LP 
Sbjct: 28  PALLFLLPLSGISPDIVMQLALATSLATIIVTSGSSALNHLKLGNVDMFVVK-WL--LPG 84

Query: 110 TTV---VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
             V   + S++   +   +L K F    L++ + M +  R+      P   +  ++G   
Sbjct: 85  VLVGGFLGSVIAEWIPNHYLPKVFGAIVLVLALQMYRSIRVTHTWPMPGAMMTALYGSGI 144

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S   G+GGG  +   +  +G  + KA  +S+    +IA   +L  I  G+   GLP 
Sbjct: 145 GVVSSLAGIGGGSLSVPFLNHHGVEMRKAVGSSSVCGFMIAISGMLGFILHGYQAEGLPQ 204

Query: 227 WSLGFVNIGAVLIILPISILIT----PLATKLSYMIGKKYLTI 265
           +S+G+V + A++ I   S+L T     LAT+L   + K++  +
Sbjct: 205 YSVGYVYLPALVAIASTSMLTTRIGAKLATQLPTTVLKRFFAV 247


>gi|307544289|ref|YP_003896768.1| hypothetical protein HELO_1699 [Halomonas elongata DSM 2581]
 gi|307216313|emb|CBV41583.1| K07090 [Halomonas elongata DSM 2581]
          Length = 264

 Score = 75.5 bits (184), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 101/230 (43%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L  AF L G+   + MH+A+GTSL  I  T   S   H R G+++       +  L 
Sbjct: 33  VPALVFAFDLQGVAPEVSMHLAVGTSLATIVVTGASSAWGHYRRGSVHWAWFLALLPGLM 92

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           +  +    +  ++    L   F IF LL+   ML   R       P      + G V G 
Sbjct: 93  LGAIAGVFVAGNLSGGLLGMLFGIFMLLVAARMLLGLRPRPGGLAPGRSAMMLAGGVIGA 152

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S   G+GGG  +   +   GA++ +A  TS+     IA       I  GW   GLPP +
Sbjct: 153 VSALFGIGGGTLSVPWLSRSGATMTQAVGTSSVCGLPIALFGTATFIVVGWQAPGLPPGA 212

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           LG+V   A L I+  S+    L   L++ +  + L + F++++      F
Sbjct: 213 LGYVMWPAFLGIVLASVPCARLGVWLAHRLPARLLRLAFAVLLTGVGLKF 262


>gi|171061009|ref|YP_001793358.1| hypothetical protein Lcho_4342 [Leptothrix cholodnii SP-6]
 gi|170778454|gb|ACB36593.1| protein of unknown function DUF81 [Leptothrix cholodnii SP-6]
          Length = 274

 Score = 75.5 bits (184), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 103/224 (45%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L+  F+L     +  +H+A+GTSL  I  TS+ S   H   G ++  I++  +  + 
Sbjct: 36  VPLLAWLFELQHFAPASMLHLALGTSLTTIIFTSISSLRAHHAKGNVDWTIVRQIVPGIA 95

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           I  ++   +   +  + L   FA+F       M    +    R  P        G++   
Sbjct: 96  IGGLIGGALAKQLPTATLALIFAVFVSYSATQMFLNAKPKPSRSLPGAAGVAGVGVLIST 155

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G GGG  +   M +   +I++A  TSA +   IA    +V    G    GLPP S
Sbjct: 156 LSQLVGAGGGFLSVPFMTWCNVTIHRAVGTSAAIGLPIAIVGTVVYFLGGQSSTGLPPGS 215

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
            G++ + A+L +L  S+L+ P+  +L+  +    L   F+  +F
Sbjct: 216 FGYIYLPALLAVLVPSVLMAPVGARLASTLPVATLKRVFAGFLF 259


>gi|269966618|ref|ZP_06180699.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269828803|gb|EEZ83056.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 263

 Score = 75.5 bits (184), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 2/197 (1%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           GI   + MH+A+ TSL  I  TS  S M H + G ++M ++K  +  + I   V + +  
Sbjct: 43  GISPEMSMHMALATSLASIIVTSGSSAMNHLKLGNVDMFVVKWLMPGVVIGGFVGANIAE 102

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +   +L K F +  L + + M +  ++   +  P + V  ++G   G +S   G+GGG 
Sbjct: 103 WIPTHYLPKVFGVIVLCLSVQMFRSIKVTSSKPMPSSPVTVVYGTGIGVVSSLAGIGGGS 162

Query: 180 FT-NLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
            +   L   +G  + KA  +S+    +IA   ++  I  G+ + GLP +S+G+V + A+L
Sbjct: 163 LSVPFLNK-HGIEMRKAVGSSSVCGCVIAISGMIGFILHGYKVEGLPSYSIGYVYLPALL 221

Query: 239 IILPISILITPLATKLS 255
            I   S+L T +  KL+
Sbjct: 222 AIAMASMLTTKVGAKLA 238


>gi|315179251|gb|ADT86165.1| predicted permease [Vibrio furnissii NCTC 11218]
          Length = 264

 Score = 75.5 bits (184), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 10/223 (4%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L     L GI   I M +A+ TSL  I  TS  S + H + G ++M ++K W+  LP 
Sbjct: 33  PALLFLLPLSGISPDIVMQLALATSLATIIVTSGSSALNHLKLGNVDMFVVK-WL--LPG 89

Query: 110 TTV---VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
             V   + S++   +   +L K F    L++ + M +  R+      P   +  ++G   
Sbjct: 90  VLVGGFLGSVIAEWIPNHYLPKVFGAIVLVLALQMYRSIRVTHTWPMPGAMMTALYGSGI 149

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S   G+GGG  +   +  +G  + KA  +S+    +IA   +L  I  G+   GLP 
Sbjct: 150 GVVSSLAGIGGGSLSVPFLNHHGVEMRKAVGSSSVCGFMIAISGMLGFILHGYQAEGLPQ 209

Query: 227 WSLGFVNIGAVLIILPISILIT----PLATKLSYMIGKKYLTI 265
           +S+G+V + A++ I   S+L T     LAT+L   + K++  +
Sbjct: 210 YSVGYVYLPALVAIASTSMLTTRIGAKLATQLPTTVLKRFFAV 252


>gi|307154644|ref|YP_003890028.1| hypothetical protein Cyan7822_4862 [Cyanothece sp. PCC 7822]
 gi|306984872|gb|ADN16753.1| protein of unknown function DUF81 [Cyanothece sp. PCC 7822]
          Length = 266

 Score = 75.1 bits (183), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 126/245 (51%), Gaps = 9/245 (3%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
           ++GL G+GGG+V+VP L   FQLM I  SI MH+AMGTS+ V+  T+  S   H+  G I
Sbjct: 20  MAGLLGIGGGMVIVPGLFFIFQLMEIPMSILMHLAMGTSMCVMICTATASTWTHQLKGDI 79

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD 155
               L   +  + +  VV +L+  H+    L   F IF L + + +L + +L  + +   
Sbjct: 80  RWDFLGKILPGIFLGLVVGALVSQHLSTRLLETIFGIFLLFVALRILLKGKLKSQPQSKP 139

Query: 156 NYVKYI--WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS---ALIAFPA 210
             + +I   GMV G  SG LG+GGG  +   +++ G  + +   TSA  S   ++I   +
Sbjct: 140 PQLSFINLVGMVIGLKSGLLGIGGGAISIPFLMYCGLPMTQVAGTSASFSLPISIIGTFS 199

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           L +   SG       P + G++   AVL+I P ++    L TKLS+ I  + + + F+  
Sbjct: 200 LGLLAASGTDF----PLTTGYIYWPAVLLIAPFTMFGATLGTKLSHTISSEKMRLIFACF 255

Query: 271 MFTTS 275
           +   S
Sbjct: 256 LMAVS 260


>gi|291615140|ref|YP_003525297.1| hypothetical protein Slit_2685 [Sideroxydans lithotrophicus ES-1]
 gi|291585252|gb|ADE12910.1| protein of unknown function DUF81 [Sideroxydans lithotrophicus
           ES-1]
          Length = 265

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 98/216 (45%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
           F          MH+A+GT++  I  TS+ S  +H +H  +N ++++     + + T + +
Sbjct: 37  FDAQHFSAEHSMHLALGTAMATIVFTSISSMRKHHQHDAVNWQVVRRITPGILLGTALGA 96

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGV 175
           L  SH+    L   F +F       +L   R +  R+ P        G +TG+LS  + +
Sbjct: 97  LSASHIPARELGIFFTLFVYFAAAQILVDKRPHASRQLPGAAGMTFTGTLTGWLSSMVSI 156

Query: 176 GGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           GGG      +++    I  A  T++ +   IA    L  I  G  ++ LP   LG+V + 
Sbjct: 157 GGGTIVVPFLIWCNVPIRNAIGTASAIGFPIAVGGTLGYIAVGSHIDALPEPHLGYVYLP 216

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           A+  I   S+L  P   K ++ +  + L   F++++
Sbjct: 217 ALFWIASASVLTAPFGAKAAHRMKVELLRKLFAVLL 252


>gi|269959598|ref|ZP_06173979.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835656|gb|EEZ89734.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 263

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 124/234 (52%), Gaps = 1/234 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I L+ + +F+ G ++GL G+GGGL++VP L     L GI   + MH+A+ TSL  I  T
Sbjct: 6   FILLLALGAFV-GVMAGLLGIGGGLIVVPALLYLLPLAGISPEMSMHMALATSLASIIVT 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  S + H + G ++M ++K  +  + I   V + +   +   +L K F +  L + I M
Sbjct: 65  SGSSALNHLKLGNVDMFVVKWLMPGVVIGGFVGANIAEWIPTHYLPKVFGVIVLCLAIQM 124

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
            +  +   E+  P + V  ++G   G +S   G+GGG  +   +  +G  + KA  +S+ 
Sbjct: 125 FRSIKTKSEKPMPSSPVTVMYGTGIGVVSSLAGIGGGSLSVPFLNKHGIEMRKAVGSSSV 184

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
              +IA   ++  I  G+ + GLP +S+G+V + A+  I   S+L T +  K++
Sbjct: 185 CGCVIAISGMIGFILHGYKVEGLPDYSVGYVYLPALAAIAMTSMLTTKVGAKMA 238


>gi|325204318|gb|ADY99771.1| putative membrane protein [Neisseria meningitidis M01-240355]
          Length = 268

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKRAVDWKTVFAMMPGMIFGVFTGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   R    R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGRQTASRPLPGLPGLTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLINGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKKSFGIML 256


>gi|323144582|ref|ZP_08079171.1| hypothetical protein HMPREF9444_01851 [Succinatimonas hippei YIT
           12066]
 gi|322415658|gb|EFY06403.1| hypothetical protein HMPREF9444_01851 [Succinatimonas hippei YIT
           12066]
          Length = 275

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 2/232 (0%)

Query: 46  LVMVPVLSKAF-QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWI 104
           ++ VP L   F  ++ +D ++ M +A GTSL  + PTS+ + +   R G  +M ++K W 
Sbjct: 36  VIFVPALYFVFISVLKVDPNLAMVLATGTSLMCMIPTSISAAISQYRRGNTDMHVIKRWS 95

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE-RKFPDNYVKYIWG 163
             +    VV S++ +     +L   F    +L  I  L R       +  P  + + I  
Sbjct: 96  LGMLCGVVVGSVISAFYGGQWLAILFGSVMILNSINTLFRANAKPAFKTLPRQFFQNIIA 155

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
                 S  LG+GGG  T  ++       +KA  TS+ VS  +  P  ++ I SG     
Sbjct: 156 FCIACFSVMLGIGGGTLTVPILNACSVEPHKAIGTSSAVSLFVCVPGAIILILSGHTPPN 215

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            P  + G VN+   + ++P+S+L  P   +    I    L   F++ +F  S
Sbjct: 216 APIGTFGLVNLLGAICVIPLSVLAAPYGVRFGKNIKPATLKRIFAIALFIVS 267


>gi|240949934|ref|ZP_04754253.1| permease [Actinobacillus minor NM305]
 gi|240295604|gb|EER46322.1| permease [Actinobacillus minor NM305]
          Length = 263

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 101/223 (45%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     L G+     M  A+GTS   I  T+  S   H + G ++  + K +I  + 
Sbjct: 31  VPSLVYLLPLAGVSPEHVMSAALGTSFSTIVITAFSSAQRHHKLGNVDWNVSKVFIPSIM 90

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           I+  +  L+IS +D   ++K FA+  + + + M+   +   + K        I G + G 
Sbjct: 91  ISVFLCGLIISGLDAKLMSKLFAVMVVYLALRMIFSLKKEQKIKPLTTQTTVIAGGIIGA 150

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS   G+GGG F    +   G  + +A  TS+   A +        I SGW +  LP +S
Sbjct: 151 LSSVAGIGGGAFIVPFLNGRGLEMKRAIGTSSFCGAFLGLSGTFSFIASGWNVEDLPDYS 210

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           LG+V + A+L I   S   + L    + ++    L   F++++
Sbjct: 211 LGYVYLPALLGITMTSYFTSKLGANAANVLPVATLKKAFAVML 253


>gi|86147414|ref|ZP_01065727.1| hypothetical protein MED222_01127 [Vibrio sp. MED222]
 gi|85834842|gb|EAQ52987.1| hypothetical protein MED222_01127 [Vibrio sp. MED222]
          Length = 263

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 4/210 (1%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           GI     M +A+ TSL  I  TS  S + H + G + + ++K  I  + I   + S +  
Sbjct: 43  GIPQEFAMQMALATSLSTIIVTSGSSAINHLKLGNVEIFVVKWLIPGVVIGGFLGSFVAD 102

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +   +L K F +  L++ + ML   R   ++  P +    + G   G +S   G+GGG 
Sbjct: 103 VIPAQYLPKVFGVIVLVLALQMLLSIRSKNQKSMPGSAKTVLCGGGIGLVSSLAGIGGGS 162

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            +   +  +G  + KA  +S+    +IA   +L  I+ G  ++ LP +SLG+V + A++ 
Sbjct: 163 LSVPFLNHHGVEMRKAVGSSSVCGCVIAISGMLGFIWHGSSVDDLPAYSLGYVYLPALIA 222

Query: 240 ILPISILIT----PLATKLSYMIGKKYLTI 265
           I   S+L T     LAT+L   + KK+  +
Sbjct: 223 ISCTSVLTTRVGAKLATQLPTSVLKKFFAV 252


>gi|255291927|dbj|BAH90416.1| hypothetical protein [uncultured bacterium]
          Length = 272

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 122/254 (48%), Gaps = 3/254 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y  LI V   ++G  +GL G+GGGL+++  L+  ++  G    I M +A+GTSL  I  T
Sbjct: 8   YYALIGV---VAGVAAGLLGIGGGLIIIAPLAALYRAQGFSGDILMQLAVGTSLTTIVFT 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H R G +   IL  +I  +     + +++   V    L      F  L G+ M
Sbjct: 65  SLSSARAHHRRGAVLWPILGRFIPGVVAGCALGAVIADRVSSRELEIVVGTFAGLAGLRM 124

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L +      R+ P   V     +  G +S  +G+GGG+ T   +++    +  A  TSA 
Sbjct: 125 LVKTNPPPHRRLPGTPVLVAVAVAIGTVSTLVGIGGGLMTVPFLVWSSVPVRHAIGTSAA 184

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           +   IA    +     GWG  GLPP + G+V     L I   ++L  PL   L++++  +
Sbjct: 185 LGFPIAVFGAVGMAAVGWGHPGLPPLATGYVYWPGALSIAAATVLFAPLGAHLAHVLPVR 244

Query: 262 YLTIGFSMIMFTTS 275
            +T+ F++++F  S
Sbjct: 245 VVTVIFALVLFVIS 258


>gi|289193174|ref|YP_003459115.1| protein of unknown function DUF81 [Methanocaldococcus sp. FS406-22]
 gi|288939624|gb|ADC70379.1| protein of unknown function DUF81 [Methanocaldococcus sp. FS406-22]
          Length = 261

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 130/255 (50%), Gaps = 9/255 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++ L+I   F+ G L  LFG+GGG ++ P+L+  F   GI D +    A+GTSL V+   
Sbjct: 6   FLPLLIFVGFIVGILGSLFGIGGGFLVAPILTFIFDYFGIPDGV--KFAVGTSLLVVFIN 63

Query: 82  SVMSFMEHRRHGTINMKI-LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           S++S   H +   IN K  +   +  L  + +   L+++ +D + L K F IF +   I 
Sbjct: 64  SIVSIFRHAKIKNINWKASIIIGVISLVFSYISGFLVVNFIDSAMLKKLFGIFLISNAIY 123

Query: 141 MLKRDRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
           M K   +       DN   +I+ G+V GFLSG  G+GGGI    ++ F    + ++ A S
Sbjct: 124 MAKSHHIDKISDREDNLAHFIFCGVVAGFLSGLFGIGGGIVIIPILTFAKYPVKRSVAIS 183

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII-LPISILITPLATKLSYMI 258
            GV  L +   L+   Y     N    +++G+V+I   LI+ +PI I  + L  K++  I
Sbjct: 184 VGVIPLTSIGGLIS--YLTANTNSY-IYNIGYVSIPIALIMAIPI-IYSSKLGIKINQKI 239

Query: 259 GKKYLTIGFSMIMFT 273
             K+L I  S I+ T
Sbjct: 240 SSKHLRIMLSAILGT 254


>gi|156973288|ref|YP_001444195.1| hypothetical protein VIBHAR_00969 [Vibrio harveyi ATCC BAA-1116]
 gi|156524882|gb|ABU69968.1| hypothetical protein VIBHAR_00969 [Vibrio harveyi ATCC BAA-1116]
          Length = 263

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 124/234 (52%), Gaps = 1/234 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I L+ + +F+ G ++GL G+GGGL++VP L     L GI   + MH+A+ TSL  I  T
Sbjct: 6   FILLLALGAFV-GVMAGLLGIGGGLIVVPALLYLLPLAGISPEMSMHMALATSLASIIVT 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  S + H + G ++M ++K  +  + I   V + +   +   +L K F +  L + + M
Sbjct: 65  SGSSALNHLKLGNVDMFVVKWLMPGVVIGGFVGANIAEWIPTHYLPKVFGVIVLCLAVQM 124

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
            +  +   E+  P + V  ++G   G +S   G+GGG  +   +  +G  + KA  +S+ 
Sbjct: 125 FRSIKTKSEKPMPSSPVTMMYGTGIGVVSSLAGIGGGSLSVPFLNKHGIEMRKAVGSSSV 184

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
              +IA   ++  I  G+ + GLP +S+G+V + A+  I   S+L T +  K++
Sbjct: 185 CGCVIAISGMIGFILHGYKVEGLPDYSVGYVYLPALAAIAMTSMLTTKIGAKMA 238


>gi|261212217|ref|ZP_05926503.1| hypothetical protein VCJ_002491 [Vibrio sp. RC341]
 gi|260838825|gb|EEX65476.1| hypothetical protein VCJ_002491 [Vibrio sp. RC341]
          Length = 264

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 6/199 (3%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV---VTSL 116
           GI   I M +A+ TSL  I  TS  S + H + G +++ ++K W+  +P   V     S+
Sbjct: 43  GISSDIVMQLALATSLATIILTSGSSALNHLKLGNVDLFVVK-WL--MPGVVVGGFFGSV 99

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
           +   +   +L K F +    + + M +  R+      P+  +  + G   G +S   G+G
Sbjct: 100 VAEWIPSQYLPKVFGVIVFFLSVQMFRSIRMQHHYPMPNALITTLCGTGIGVVSSLAGIG 159

Query: 177 GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           GG  +   +  +G  + KA  +S+     IA   ++  I  G+ ++ LP +S+G+V I A
Sbjct: 160 GGSLSVPFLNRHGIEMKKAVGSSSVCGFAIAISGMIGFILHGYQVDNLPQYSIGYVYIPA 219

Query: 237 VLIILPISILITPLATKLS 255
           +L I   SIL T +  KL+
Sbjct: 220 LLAIASTSILTTRIGAKLA 238


>gi|15677185|ref|NP_274338.1| hypothetical protein NMB1319 [Neisseria meningitidis MC58]
 gi|7226561|gb|AAF41694.1| conserved hypothetical protein [Neisseria meningitidis MC58]
          Length = 257

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 111/244 (45%), Gaps = 1/244 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFTMMPGMIFGVFTGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L  D     R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTDPQTASRPLPGLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYL 263
              L
Sbjct: 245 SAKL 248


>gi|217974284|ref|YP_002359035.1| hypothetical protein Sbal223_3127 [Shewanella baltica OS223]
 gi|217499419|gb|ACK47612.1| protein of unknown function DUF81 [Shewanella baltica OS223]
          Length = 266

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 117/234 (50%), Gaps = 2/234 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V +ICL + A    G ++GL G+GGGL++VP L      +GI  +   H+A+ TSL  I 
Sbjct: 7   VFFICLALGA--FVGFMAGLLGIGGGLIVVPALLYILPSVGISSAQLPHIAIATSLAAII 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ S   H + G I   + K  +  + +  + +  +   +  + L + FAIF +LM I
Sbjct: 65  LTSISSTRAHHKRGNIPWDLFKTMLPGIILGALTSGFIAERISAAALQQGFAIFVVLMSI 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M    +    R+ P   + ++   +   ++G +G+GGG+     + F+G  +  A   S
Sbjct: 125 QMAYPFKAESNRELPSAPILFVVAALVAMVAGLMGIGGGVLLVPFLTFFGLQMRYAVGFS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           A    LI+    L  I +G+    LP  +LGF+ + A+  ++  S+L+ P+  K
Sbjct: 185 AATGLLISLSGSLGYIIAGFNAPELPYGTLGFIYLPALFGLVITSVLMAPVGVK 238


>gi|319944545|ref|ZP_08018815.1| integral membrane protein [Lautropia mirabilis ATCC 51599]
 gi|319742181|gb|EFV94598.1| integral membrane protein [Lautropia mirabilis ATCC 51599]
          Length = 271

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 103/228 (45%), Gaps = 8/228 (3%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L   F   G D ++ +  A+ T+L  I  TS+ S   H R G +   ++  W+    I
Sbjct: 33  PFLVMIFDHAGHDPAMVVQTALATALATIMFTSLSSMRAHHRKGAVQWHLV--WLLAPGI 90

Query: 110 TT--VVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY---CERKFPDNYVKYIWGM 164
                + S +++ +    L  AFA+F   MG  ML+  R        + P      + G 
Sbjct: 91  LVGGQLGSRIVAWLPGQVLAVAFALFVGWMGSRMLRGARRVEPDVPARLPGRLGLAVVGT 150

Query: 165 VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
             G LS   G GGG  T   +   G  + KA ATSA     IAF   L  +  GW   GL
Sbjct: 151 GIGVLSAIFGAGGGFVTVPFLNSRGVPLPKAIATSAACGFPIAFSGTLGYMVMGW-WQGL 209

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           P  +L ++++ A+  I+P+S+L  P+   +++ +    L   F+ ++F
Sbjct: 210 PGGALAYLDVRALFTIVPMSMLFAPVGAYMAHRLPVPTLKRAFACLLF 257


>gi|320157359|ref|YP_004189738.1| hypothetical protein VVM_04095 [Vibrio vulnificus MO6-24/O]
 gi|319932671|gb|ADV87535.1| protein of unknown function DUF81 [Vibrio vulnificus MO6-24/O]
          Length = 263

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 121/229 (52%), Gaps = 1/229 (0%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+++ +F+ G ++GL G+GGGL++VP L       GI   + MH+A+ TSL  I  TS  
Sbjct: 9   LLVLGAFV-GVMAGLLGIGGGLIVVPALLYLLPWAGIPTELSMHMALATSLASIIVTSGS 67

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + H + G +++ ++K  +  + I   V + +   +   +L + F +  L++ + M + 
Sbjct: 68  SALNHLKLGNVDIFVVKWLMPGVVIGGFVGANIAEWIPTQYLPRVFGVIVLVLALQMFRS 127

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            R+   R  P + V  ++G   G +S   G+GGG  +   +  +G  + KA  +S+    
Sbjct: 128 IRVTTTRAMPSSPVTMLYGTGIGVVSSLAGIGGGSLSVPFLNRHGVEMRKAVGSSSVCGC 187

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +IA   +   I  G+ ++ LP +S+G+V + A+L I   S+L T +  +
Sbjct: 188 VIAIAGMTGFILHGYSVDSLPDYSVGYVYLPALLAIAGTSMLTTRIGAR 236


>gi|84393970|ref|ZP_00992710.1| hypothetical protein V12B01_08712 [Vibrio splendidus 12B01]
 gi|84375414|gb|EAP92321.1| hypothetical protein V12B01_08712 [Vibrio splendidus 12B01]
          Length = 263

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 4/210 (1%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           GI     M +A+ TSL  I  TS  S + H + G + + ++K  +  + I   + S +  
Sbjct: 43  GIPQEFAMQMALATSLSTIIVTSGSSAINHLKLGNVELFVVKWLMPGVVIGGFLGSFVAD 102

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +   +L K F +  L++ + ML   R   ++  P +    + G   G +S   G+GGG 
Sbjct: 103 VIPAQYLPKVFGVIVLVLALQMLLSIRSKSQKSMPGSAKTMLCGGGIGLVSSLAGIGGGS 162

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            +   +  +G  + KA  +S+    +IA   +L  I+ G  ++ LP +SLG+V + A++ 
Sbjct: 163 LSVPFLNHHGVEMRKAVGSSSVCGCVIAISGMLGFIWHGSSVDDLPAYSLGYVYLPALIA 222

Query: 240 ILPISILIT----PLATKLSYMIGKKYLTI 265
           I   S+L T     LAT+L   + KK+  +
Sbjct: 223 ISCTSVLTTRVGAKLATQLPTPVLKKFFAV 252


>gi|262163915|ref|ZP_06031654.1| hypothetical protein VMA_000355 [Vibrio mimicus VM223]
 gi|262027443|gb|EEY46109.1| hypothetical protein VMA_000355 [Vibrio mimicus VM223]
          Length = 264

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 95/196 (48%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           G+   I M +A+ TSL  I  TS  S + H + G +++ ++K  +  + I     S +  
Sbjct: 43  GVSAEITMQLALATSLATIILTSGSSALNHLKLGNVDLFVVKWLMPGVVIGGFFGSAVAE 102

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +   +L K F +    + + M +  R+      P+++V  + G   G +S   G+GGG 
Sbjct: 103 WIPSQYLPKVFGVIVFCLSVQMYRSIRMQQHHPMPNSFVTTLCGTGIGVVSSLAGIGGGS 162

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            +   +  +G  + KA  +S+     IA   ++  I  G+ +  LP +S+G+V + A+L 
Sbjct: 163 LSVPFLNRHGIEMKKAVGSSSVCGFAIAISGMIGFILHGYQVENLPQYSIGYVYVPALLA 222

Query: 240 ILPISILITPLATKLS 255
           I   S+L T +  KL+
Sbjct: 223 IATTSMLTTRIGAKLA 238


>gi|262172250|ref|ZP_06039928.1| hypothetical protein VII_003077 [Vibrio mimicus MB-451]
 gi|261893326|gb|EEY39312.1| hypothetical protein VII_003077 [Vibrio mimicus MB-451]
          Length = 264

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 95/196 (48%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           G+   I M +A+ TSL  I  TS  S + H + G +++ ++K  +  + I     S +  
Sbjct: 43  GVSAEITMQLALATSLATIILTSGSSALNHLKLGNVDLFVVKWLMPGVVIGGFFGSAVAE 102

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +   +L K F +    + + M +  R+      P+++V  + G   G +S   G+GGG 
Sbjct: 103 WIPSQYLPKVFGVIVFCLSVQMYRSIRMQHHHPMPNSFVTTLCGTGIGVVSSLAGIGGGS 162

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            +   +  +G  + KA  +S+     IA   ++  I  G+ +  LP +S+G+V + A+L 
Sbjct: 163 LSVPFLNRHGIEMKKAVGSSSVCGFAIAISGMIGFILHGYQVENLPQYSIGYVYVPALLA 222

Query: 240 ILPISILITPLATKLS 255
           I   S+L T +  KL+
Sbjct: 223 IATTSMLTTRIGAKLA 238


>gi|163857038|ref|YP_001631336.1| putative integral membrane protein [Bordetella petrii DSM 12804]
 gi|163260766|emb|CAP43068.1| putative integral membrane protein [Bordetella petrii]
          Length = 268

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 9/230 (3%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L+  F   G+   + +H A+ TS+  I  TS+ S   H+R GTI  KI    +F + 
Sbjct: 28  VPFLTMLFGWQGMPQDLIVHAAIATSMTSILFTSLSSVRAHQRKGTIQWKI----VFAMA 83

Query: 109 ITTVVTSL-----MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG 163
              +V  L     + + +  ++L+  F++F       ML+  +    R+ P        G
Sbjct: 84  PGIIVGGLFSGGAVFAALSTAWLSLFFSLFVGYSAWNMLRNKKPKPSRQMPGIAGTSAVG 143

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
              GFLSG +G GGG  +   M++   +++ A +TSA +   IA    +  + SG   N 
Sbjct: 144 AGIGFLSGLVGAGGGFLSVPFMVWCNVALHTAVSTSAALGFPIALANSIGYVASGLNENA 203

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
             P  LG++   A+L ++  S+L  P   ++++ +    L   F+ ++F 
Sbjct: 204 SQPGMLGYIYWPALLALVATSVLTAPAGARMAHRLPVATLKRVFAGLLFA 253


>gi|114564107|ref|YP_751621.1| hypothetical protein Sfri_2943 [Shewanella frigidimarina NCIMB 400]
 gi|114335400|gb|ABI72782.1| protein of unknown function DUF81 [Shewanella frigidimarina NCIMB
           400]
          Length = 266

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 96/205 (46%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L      +GI  +   HVA+ TSL  I  TS+ S   H + G I  ++ K     + 
Sbjct: 34  VPALLYILPSVGISSTQITHVAIATSLASIILTSMSSATAHHKRGNIPWELFKPIFPGIV 93

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           I ++ ++ +   +    L +AFAIF +LM + M    ++      P   V  +       
Sbjct: 94  IGSLASAFVSEQIASDDLQQAFAIFVVLMAVQMAFPFKVKTGGSMPSFAVLLVISTAIAL 153

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           ++G +G+GGG+     + + G  + +A   S+    LIA    +  I +G+ +  LP  S
Sbjct: 154 IAGLMGIGGGVLLVPFLSYCGLQMRQAVGFSSATGMLIAVSGTIGYIIAGFDVPNLPEGS 213

Query: 229 LGFVNIGAVLIILPISILITPLATK 253
           +GF+ + A++ I+  S+L  P   K
Sbjct: 214 VGFIYLPALIGIIISSMLCAPFGVK 238


>gi|152998147|ref|YP_001342982.1| hypothetical protein Mmwyl1_4151 [Marinomonas sp. MWYL1]
 gi|150839071|gb|ABR73047.1| protein of unknown function DUF81 [Marinomonas sp. MWYL1]
          Length = 260

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 2/190 (1%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV-L 107
           VPVL  +F L G    +  H+A+GTSL  I  TS+ S + H + G +  +++  W+   +
Sbjct: 29  VPVLIFSFTLQGFSGEVLTHLAVGTSLSAIFFTSINSVLAHHKKGAVEWRMV-IWLGAGI 87

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
              + +  +  S++  + L +   +F LLM + M    R   + +     V  + G+V G
Sbjct: 88  LFGSSLGGVTASYIPGANLQQIIGVFSLLMSLQMALNWRPKGQGQGLTKPVMSVAGVVIG 147

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           ++S   G+GGG      + + G  I KA ATSA     IA    L  I  GW    LP  
Sbjct: 148 WVSAIFGIGGGSLMVPFLSWKGVDIKKAVATSAACGLPIALSGTLSFIVIGWNHTLLPSK 207

Query: 228 SLGFVNIGAV 237
           SLGFV + A+
Sbjct: 208 SLGFVYLPAL 217


>gi|117921480|ref|YP_870672.1| hypothetical protein Shewana3_3041 [Shewanella sp. ANA-3]
 gi|117613812|gb|ABK49266.1| protein of unknown function DUF81 [Shewanella sp. ANA-3]
          Length = 266

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 120/234 (51%), Gaps = 2/234 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V +ICL + A    G ++GL G+GGGL++VP L      +GI  +   H+A+ TSL  I 
Sbjct: 7   VFFICLALGA--FVGFMAGLLGIGGGLIVVPALLYILPSVGITSAQLPHIAIATSLAAII 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ S   H + G +   + +     + +  +++  +   +  + L + FAIF +LM I
Sbjct: 65  LTSISSARAHHKRGNVPWGLFRTMFPGIILGALMSGFIAEQIPAATLRQGFAIFVMLMAI 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M    +    R+ P++ V ++  ++   ++G +G+GGG+     + ++G  +  A   S
Sbjct: 125 QMAYPFKTESNRELPNSMVLFVVAVIVAAIAGLMGIGGGVLLVPFLTYFGLQMRLAVGFS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           A    LI+    L  I +G+    LP  +LG++ + A+  ++  SIL+ P+  K
Sbjct: 185 AATGLLISLSGSLGYIIAGFNAPDLPEGTLGYIYLPALFGLIITSILMAPVGVK 238


>gi|317484207|ref|ZP_07943136.1| hypothetical protein HMPREF0179_00487 [Bilophila wadsworthia 3_1_6]
 gi|316924556|gb|EFV45713.1| hypothetical protein HMPREF0179_00487 [Bilophila wadsworthia 3_1_6]
          Length = 265

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 103/222 (46%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L  AF        + M +A+GTS+G I  TS+ S + H R+  +    +++    + I
Sbjct: 32  PMLVFAFGWQNFPPDVLMLMALGTSMGSIMFTSISSSLAHSRNKGVQWDAVRNITPGILI 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T   S + SHV   FL   F  F   +   ML   +    R  P      + G + G +
Sbjct: 92  GTFCGSFLASHVPARFLQLFFVAFLFFVITQMLSGKKPKPSRHLPGLGGMSVAGGIIGVV 151

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   +L+    + KA  TSA +   IA       I +GW    LPP+S 
Sbjct: 152 SSLVGIGGGTLSVPFLLWNNLDMRKAIGTSAAIGFPIALAGCFGYIVNGWNAANLPPYSF 211

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           G++ + ++  I+ +S+   PL  +L+  +    L   F++++
Sbjct: 212 GYIYLPSLFGIVVVSMFTAPLGARLAQTLPVPKLKKCFALLL 253


>gi|258624713|ref|ZP_05719647.1| UPF0721 transmembrane protein [Vibrio mimicus VM603]
 gi|258583000|gb|EEW07815.1| UPF0721 transmembrane protein [Vibrio mimicus VM603]
          Length = 264

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 94/196 (47%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           G+   I M +A+ TSL  I  TS  S + H + G +++ ++K  +  + I     S +  
Sbjct: 43  GVSAEITMQLALATSLATIILTSGSSALNHLKLGNVDLFVVKWLMPGVVIGGFFGSAVAE 102

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +   +L K F +    + + M +  R+      P+ +V  + G   G +S   G+GGG 
Sbjct: 103 WIPSQYLPKVFGVIVFCLSVQMYRSIRMQQHHPMPNAFVTTVCGTGIGVVSSLAGIGGGS 162

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            +   +  +G  + KA  +S+     IA   ++  I  G+ +  LP +S+G+V + A+L 
Sbjct: 163 LSVPFLNRHGIEMKKAVGSSSVCGFAIAISGMIGFILHGYQVENLPQYSIGYVYVPALLA 222

Query: 240 ILPISILITPLATKLS 255
           I   S+L T +  KL+
Sbjct: 223 IATTSMLTTRIGAKLA 238


>gi|121605270|ref|YP_982599.1| hypothetical protein Pnap_2371 [Polaromonas naphthalenivorans CJ2]
 gi|120594239|gb|ABM37678.1| protein of unknown function DUF81 [Polaromonas naphthalenivorans
           CJ2]
          Length = 271

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 1/226 (0%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVP ++      G+   + + +A+ TS+  I  TS+ S   H R G +   I+K     +
Sbjct: 33  MVPFITIILAHRGVSADLAVKMAIATSMATIIFTSLSSVRAHHRRGAVRWDIVKRLAPGI 92

Query: 108 PITTVVTSLMI-SHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
            + +++ SL + + +  S+L   F +F       M    +    R+ P    +   G   
Sbjct: 93  VMGSIIGSLGVFALLKGSYLAIFFGLFVSFSATQMFLDKKPKPTRQMPGTGGQLAAGGFI 152

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           GFLSG +G GGG  +   M +    I+ A ATSA +   IA   +L    SG  +  LP 
Sbjct: 153 GFLSGLVGAGGGFISVPFMTWCNIPIHHAVATSAALGFPIAVANVLGYAISGQTVQNLPE 212

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
            + G++ + A+L+I   S+L  PL  + ++ I    L   F+ I++
Sbjct: 213 GAFGYIWLPALLVIAICSVLTAPLGARAAHGIPVGKLKRVFASILY 258


>gi|258620341|ref|ZP_05715379.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258587220|gb|EEW11931.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 264

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 94/196 (47%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           G+   I M +A+ TSL  I  TS  S + H + G +++ ++K  +  + I     S +  
Sbjct: 43  GVSAEITMQLALATSLATIILTSGSSALNHLKLGNVDLFVVKWLMPGVVIGGFFGSAVAE 102

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +   +L K F +    + + M +  R+      P+ ++  I G   G +S   G+GGG 
Sbjct: 103 WIPSQYLPKVFGVIVFCLSVQMYRSIRMQQHHPMPNAFITTICGTGIGVVSSLAGIGGGS 162

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            +   +  +G  + KA  +S+     IA   ++  I  G+ +  LP +S+G+V + A+L 
Sbjct: 163 LSVPFLNRHGIEMKKAVGSSSVCGFAIAISGMIGFILHGYQVENLPQYSIGYVYVPALLA 222

Query: 240 ILPISILITPLATKLS 255
           I   S+L T +  KL+
Sbjct: 223 IATTSMLTTRIGAKLA 238


>gi|319789078|ref|YP_004150711.1| protein of unknown function DUF81 [Thermovibrio ammonificans HB-1]
 gi|317113580|gb|ADU96070.1| protein of unknown function DUF81 [Thermovibrio ammonificans HB-1]
          Length = 262

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 98/179 (54%), Gaps = 5/179 (2%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G ++GLFG+GGG+++VP+    FQ +G+   +   +A+ TSL VIA +++ S + H   
Sbjct: 15  AGFVAGLFGIGGGVILVPLFWFFFQKIGVPQELSFKLAVATSLSVIAVSTLFSTVSHILK 74

Query: 93  GTINMK-ILKDWIFVLPITTVVTSLMISH-VDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           G+  +K   K  IF LP   V+  ++++H +    L   F IF ++ G+ +L   R   +
Sbjct: 75  GSYPLKEAAKLLIFSLP--GVLAGVLLAHYLPVKALKNIFGIFLVITGVKLLLSGRGSRK 132

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATATSAGVSALIAF 208
            +  +  +  +  +++GFLS  LG+GGG+  N +L    G  + +  A ++  S L A 
Sbjct: 133 LRVKERVIVPLTVVLSGFLSSLLGIGGGVVVNSILFSVEGIKVERTVAIASAASFLNAL 191


>gi|254230567|ref|ZP_04923933.1| permease [Vibrio sp. Ex25]
 gi|262395198|ref|YP_003287052.1| hypothetical protein VEA_004429 [Vibrio sp. Ex25]
 gi|151936913|gb|EDN55805.1| permease [Vibrio sp. Ex25]
 gi|262338792|gb|ACY52587.1| hypothetical protein VEA_004429 [Vibrio sp. Ex25]
          Length = 263

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 2/197 (1%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           GI   + MH+A+ TSL  I  TS  S M H + G ++M ++K  +  + I   V + +  
Sbjct: 43  GISPEMSMHMALATSLASIIVTSGSSAMNHLKLGNVDMFVVKWLMPGVVIGGFVGANIAE 102

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +   +L K F +  L + + M +  ++   +  P + V   +G   G +S   G+GGG 
Sbjct: 103 WIPTHYLPKVFGVIVLCLSVQMFRSIKVTSSKPMPSSPVTVAYGTGIGVVSSLAGIGGGS 162

Query: 180 FT-NLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
            +   L   +G  + KA  +S+    +IA   ++  I  G+ + GLP +S+G+V + A+L
Sbjct: 163 LSVPFLNK-HGIEMRKAVGSSSVCGCVIAISGMIGFILHGYKVEGLPSYSIGYVYLPALL 221

Query: 239 IILPISILITPLATKLS 255
            I   S+L T +  KL+
Sbjct: 222 AIAMASMLTTKVGAKLA 238


>gi|197334961|ref|YP_002155213.1| thymidylate synthase [Vibrio fischeri MJ11]
 gi|197316451|gb|ACH65898.1| thymidylate synthase [Vibrio fischeri MJ11]
          Length = 265

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 97/208 (46%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP L       GID SI M +A+GTSL  I  TS  S + H R G + + +++     +
Sbjct: 32  VVPALLWLLPQAGIDSSIVMQMALGTSLATIILTSTSSALNHLRLGNVEVALIRSLAPGV 91

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
                + S +   +   +L K F +  LL+ + ML   +    R  P        G V G
Sbjct: 92  IAGGFLGSYVAELIPSQYLPKVFGVIVLLLALQMLLALKFTATRTMPSPLKIAASGGVIG 151

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S   G+GGG  T   + F+G  + KA  +S+    LIA   ++  I  G  +  LP  
Sbjct: 152 VVSSLAGIGGGSLTVPYLSFHGVEMRKAIGSSSLCGTLIALAGMIGFILHGVQVTNLPSM 211

Query: 228 SLGFVNIGAVLIILPISILITPLATKLS 255
           SLG+V + A+  I   SIL T +  KL+
Sbjct: 212 SLGYVYLPALCGIGVTSILTTRIGAKLT 239


>gi|218708559|ref|YP_002416180.1| hypothetical protein VS_0525 [Vibrio splendidus LGP32]
 gi|218321578|emb|CAV17530.1| hypothetical protein VS_0525 [Vibrio splendidus LGP32]
          Length = 263

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 4/210 (1%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           GI     M +A+ TSL  I  TS  S + H + G + + ++K  +  + +   + S +  
Sbjct: 43  GIPQEFAMQMALATSLSTIIVTSGSSAINHLKLGNVEIFVVKWLMPGVVVGGFLGSFVAD 102

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +   +L K F +  L++ + ML   R   ++  P +    + G   G +S   G+GGG 
Sbjct: 103 VIPAQYLPKVFGVIVLVLALQMLLSIRSKSQKSMPGSAKTVLCGGGIGLVSSLAGIGGGS 162

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            +   +  +G  + KA  +S+    +IA   +L  I+ G  ++ LP +SLG+V + A++ 
Sbjct: 163 LSVPFLNHHGVEMRKAVGSSSVCGCVIAISGMLGFIWHGSSVDDLPAYSLGYVYLPALIA 222

Query: 240 ILPISILIT----PLATKLSYMIGKKYLTI 265
           I   S+L T     LAT+L   + KK+  +
Sbjct: 223 ISCTSVLTTRVGAKLATQLPTPVLKKFFAV 252


>gi|303246521|ref|ZP_07332800.1| protein of unknown function DUF81 [Desulfovibrio fructosovorans JJ]
 gi|302492231|gb|EFL52106.1| protein of unknown function DUF81 [Desulfovibrio fructosovorans JJ]
          Length = 267

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 95/209 (45%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L   F   G+     M +A+GTSL  I  TSV SF  H + G +   I K     + I
Sbjct: 34  PALYFLFTAQGLPSEHIMQMALGTSLATIVFTSVASFRAHDKRGAVRWDIFKSITPGILI 93

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            + + + + + +   FL   F +F   + I M+   +    R  P     +  G   G +
Sbjct: 94  GSFLGAWVAAQLSTKFLKGFFVVFLYYVSIQMILNIKPKPSRHIPGTAGMFTTGGGVGLI 153

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  T   M +    I+ A  T++ +   IA   ++  I +G G   LP  S+
Sbjct: 154 SNMVGIGGGTITVPFMTWCNIPIHVAVGTASAIGFPIAAAGVIGYIANGLGKADLPGMSI 213

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMI 258
           G++ + A++ I+  S+L      KL++ +
Sbjct: 214 GYIYLPALIGIVATSMLTAKYGAKLAHAL 242


>gi|78356292|ref|YP_387741.1| hypothetical protein Dde_1245 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218697|gb|ABB38046.1| membrane protein, putative [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 266

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 107/226 (47%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VP+L+ AF+L    +    H+A+GTS+  +  TS+ S   H + GTIN          
Sbjct: 29  VIVPMLNIAFELQNFPEQHLQHIALGTSMATMIFTSLSSMRAHHKRGTINYNAFWRLAPG 88

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           +   T + + + S +   FL   F  F   +   ML   +    R+ P     +  G   
Sbjct: 89  IVCGTYLGAWVASLLSTVFLKAFFGFFLYYVAAQMLLNLKPASSRELPGAAGVFAAGGGI 148

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G  S   G+GGG  T   + +   +++ A AT+A +   IA       +++GW + G+P 
Sbjct: 149 GVFSALAGIGGGTLTVPFLSWCNQTMHTAIATAAAIGMPIALTGTAGYVFTGWNVAGIPG 208

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             LG+V + A L I+ +S+L  PL  KL++ +    L   F+ ++F
Sbjct: 209 PHLGYVYLPAFLGIICMSVLTAPLGAKLAHSLPVDKLRRIFAGLLF 254


>gi|78222315|ref|YP_384062.1| hypothetical protein Gmet_1097 [Geobacter metallireducens GS-15]
 gi|78193570|gb|ABB31337.1| protein of unknown function DUF81 [Geobacter metallireducens GS-15]
          Length = 263

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 95/207 (45%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+  F   G+      H+A+GTSL  I  TSV S   H   G +  ++++     +  
Sbjct: 30  PALTFLFTAQGLPAPYIAHLALGTSLATIIFTSVSSLRAHHGRGAVEWRVVRRISAGIVA 89

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T+  S + + +    L   F +F   + I ML   R    R+ P        G V G +
Sbjct: 90  GTLAGSWVAAQLSTRSLKVFFVVFLYYVAIQMLLNIRPKPSRQLPGTGGMLGVGGVIGAV 149

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   M++   S++ A  TSA +   IA       + +G  +  LPPWS+
Sbjct: 150 SSLVGIGGGSLSVPFMVWCNISMHNAIGTSAAIGFPIALAGAAGYMANGLVVTSLPPWSV 209

Query: 230 GFVNIGAVLIILPISILITPLATKLSY 256
           GFV + A+  I   S++  P   +L++
Sbjct: 210 GFVYLPALAGIALASVITAPFGARLAH 236


>gi|153820134|ref|ZP_01972801.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126509326|gb|EAZ71920.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
          Length = 260

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 95/196 (48%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           GI   I M +A+ TSL  I  TS  S + H + G +++ ++K  +  + +   + S++  
Sbjct: 39  GISTEIVMQLALATSLATIILTSGSSALNHLKLGNVDVFVVKWLMPGVVVGGFLGSVVAE 98

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +   +L K F +  L + + M +  R       P  ++  + G   G +S   G+GGG 
Sbjct: 99  WIPSQYLPKVFGVIVLCLSVQMYRSIRALQNHPMPSAWITTLCGTGIGVISSLAGIGGGS 158

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            +   +  +G  + KA  +S+     IA   ++  I  G+ +  LP +SLG+V + A+L 
Sbjct: 159 LSVPFLNRHGIEMKKAIGSSSVCGFAIAISGMIGFILHGYQVENLPQYSLGYVYLPALLA 218

Query: 240 ILPISILITPLATKLS 255
           I   S+L T +  KL+
Sbjct: 219 IATTSMLTTRIGAKLA 234


>gi|88798443|ref|ZP_01114028.1| hypothetical protein MED297_08291 [Reinekea sp. MED297]
 gi|88778883|gb|EAR10073.1| hypothetical protein MED297_08291 [Reinekea sp. MED297]
          Length = 274

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 1/226 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL    Q  G+  +  M +A  TSL +I PT++ S   H R G +++++LK W  ++ +
Sbjct: 38  PVLYFLMQGFGVSAASAMAIATSTSLAIIVPTAISSVRAHYRKGNVDVELLKFWGAIILL 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE-RKFPDNYVKYIWGMVTGF 168
             +  SL+ + V  +FL   F I  +L+ I ML R          P    + +     G 
Sbjct: 98  AAIFGSLIANAVSGTFLTWMFGIIAVLVSINMLFRSGAPALFPTLPGKPGQALMATSVGG 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG     L+  +  + ++A  T+A    LIA P  L  +  G      P  +
Sbjct: 158 LSVMVGIGGGTIGVPLLTSFNVAAHRAVGTAAAFGLLIALPGALTLMVVGETPMDAPVGT 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
              +N+ A+ +I+P+++L  P+   L   +  K L   F++++F T
Sbjct: 218 WRLLNLPALALIVPLTVLFAPVGAWLGAKLNAKELKKAFAVVLFFT 263


>gi|171059351|ref|YP_001791700.1| hypothetical protein Lcho_2670 [Leptothrix cholodnii SP-6]
 gi|170776796|gb|ACB34935.1| protein of unknown function DUF81 [Leptothrix cholodnii SP-6]
          Length = 270

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 5/228 (2%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN---MKILKDWI 104
           MVP ++      G+D ++ + +A+ TS+  I  TS+ S   H + G +    +++L   I
Sbjct: 33  MVPFMTLILSHRGVDSALSVKMAIATSMATILFTSISSVRAHHKRGAVRWDIVRVLAPGI 92

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM 164
               +        +  +  + L   FA+F       ML   +    R+ P        G 
Sbjct: 93  VGGGLLAGAGVFAL--LKGTTLALVFALFVAFSATQMLLNKKPPPSRQMPGTAGSLGAGG 150

Query: 165 VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
           V GF+SG +G GGG  +   M +   +++ A ATSA +   IA    +  +  GW +   
Sbjct: 151 VIGFISGLVGAGGGFISVPFMGWCNVAMHNAVATSAALGFPIALANTVGYVVGGWSMQSP 210

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
            P +LGF+ +  + +I   S+L  PL  + ++ +  + L   F+++++
Sbjct: 211 VPGALGFLWLPGLAVIATASVLTAPLGARTAHAMNVQQLKKVFALVLY 258


>gi|37678861|ref|NP_933470.1| permease [Vibrio vulnificus YJ016]
 gi|37197602|dbj|BAC93441.1| predicted permease [Vibrio vulnificus YJ016]
          Length = 263

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 120/229 (52%), Gaps = 1/229 (0%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+++ +F+ G ++GL G+GGGL++VP L       GI   + MH+A+ TSL  I  TS  
Sbjct: 9   LLVLGAFV-GVMAGLLGIGGGLIVVPALLYLLPWAGIPTELSMHMALATSLASIIVTSGS 67

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + H + G +++ ++K  +  + I   V + +   +   +L + F +  L++ + M + 
Sbjct: 68  SALNHLKLGNVDIFVVKWLMPGVVIGGFVGANIAEWIPTQYLPRVFGVIVLVLALQMFRS 127

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            R+   R  P + V  ++G   G +S   G+GGG  +   +  +G  + KA  +S+    
Sbjct: 128 IRVTTTRAMPSSPVTMLYGTGIGVVSSLAGIGGGSLSVPFLNRHGVEMRKAVGSSSVCGC 187

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +IA   +   I  G+ +  LP +S+G+V + A+L I   S+L T +  +
Sbjct: 188 VIAIAGMTGFILHGYSVASLPDYSVGYVYLPALLAIAGTSMLTTRIGAR 236


>gi|150403383|ref|YP_001330677.1| hypothetical protein MmarC7_1464 [Methanococcus maripaludis C7]
 gi|150034413|gb|ABR66526.1| protein of unknown function DUF81 [Methanococcus maripaludis C7]
          Length = 274

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 112/215 (52%), Gaps = 2/215 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++ +++V     G  +GL G+GG  +M+P+       MGID +I + VA GT+L V+ PT
Sbjct: 5   FMIILLVTGIFVGLFAGLLGIGGCFIMIPIQYWILTAMGIDPTIAIRVAFGTNLMVVLPT 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            +   ++H + G +          +  I     + + S++  + L   F +  L+  + M
Sbjct: 65  ILSGVLKHHKKGIVLWNQAITLGVIGAIGGFGGAYVASYLSGTILKTMFGLTMLIGALRM 124

Query: 142 LKRDRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATS 199
           +    +  E +   N + YI+ G++ GF++G +G+GGG+    +ML F   ++++A  TS
Sbjct: 125 ITAKPIRVEGEPNKNTLTYIFLGIIIGFVTGLIGIGGGVLVIPIMLIFLNFNMHEAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           + +    +  A L  +  G G  GLPP+S+G+ NI
Sbjct: 185 SAMIMFTSLGAGLAYMLLGLGQAGLPPYSIGYFNI 219


>gi|15640692|ref|NP_230322.1| hypothetical protein VC0673 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121591331|ref|ZP_01678620.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121730083|ref|ZP_01682488.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147675364|ref|YP_001216168.1| hypothetical protein VC0395_A0205 [Vibrio cholerae O395]
 gi|153216948|ref|ZP_01950712.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|153803569|ref|ZP_01958155.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|153823740|ref|ZP_01976407.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|153826504|ref|ZP_01979171.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|153829179|ref|ZP_01981846.1| putative membrane protein [Vibrio cholerae 623-39]
 gi|227080854|ref|YP_002809405.1| hypothetical protein VCM66_0631 [Vibrio cholerae M66-2]
 gi|229505707|ref|ZP_04395217.1| hypothetical protein VCF_000918 [Vibrio cholerae BX 330286]
 gi|229508719|ref|ZP_04398212.1| hypothetical protein VCE_000124 [Vibrio cholerae B33]
 gi|229512933|ref|ZP_04402400.1| hypothetical protein VCB_000577 [Vibrio cholerae TMA 21]
 gi|229519531|ref|ZP_04408974.1| hypothetical protein VCC_003561 [Vibrio cholerae RC9]
 gi|229520963|ref|ZP_04410385.1| hypothetical protein VIF_001487 [Vibrio cholerae TM 11079-80]
 gi|229525324|ref|ZP_04414729.1| hypothetical protein VCA_002946 [Vibrio cholerae bv. albensis
           VL426]
 gi|229530478|ref|ZP_04419866.1| hypothetical protein VCG_003598 [Vibrio cholerae 12129(1)]
 gi|229608726|ref|YP_002879374.1| hypothetical protein VCD_003648 [Vibrio cholerae MJ-1236]
 gi|254226523|ref|ZP_04920106.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|254291913|ref|ZP_04962695.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|254851005|ref|ZP_05240355.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255743868|ref|ZP_05417824.1| hypothetical protein VCH_000163 [Vibrio cholera CIRS 101]
 gi|262156087|ref|ZP_06029206.1| hypothetical protein VIG_001308 [Vibrio cholerae INDRE 91/1]
 gi|262169972|ref|ZP_06037662.1| hypothetical protein VIJ_003235 [Vibrio cholerae RC27]
 gi|297580797|ref|ZP_06942723.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|298500787|ref|ZP_07010590.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9655111|gb|AAF93838.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121546812|gb|EAX56977.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121628170|gb|EAX60697.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|124114013|gb|EAY32833.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124120893|gb|EAY39636.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|125620927|gb|EAZ49278.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|126518734|gb|EAZ75957.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146317247|gb|ABQ21786.1| putative membrane protein [Vibrio cholerae O395]
 gi|148875368|gb|EDL73503.1| putative membrane protein [Vibrio cholerae 623-39]
 gi|149739684|gb|EDM53891.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|150422199|gb|EDN14164.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|227008742|gb|ACP04954.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227012498|gb|ACP08708.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|229332251|gb|EEN97739.1| hypothetical protein VCG_003598 [Vibrio cholerae 12129(1)]
 gi|229338905|gb|EEO03922.1| hypothetical protein VCA_002946 [Vibrio cholerae bv. albensis
           VL426]
 gi|229342196|gb|EEO07192.1| hypothetical protein VIF_001487 [Vibrio cholerae TM 11079-80]
 gi|229344220|gb|EEO09195.1| hypothetical protein VCC_003561 [Vibrio cholerae RC9]
 gi|229350182|gb|EEO15135.1| hypothetical protein VCB_000577 [Vibrio cholerae TMA 21]
 gi|229354243|gb|EEO19173.1| hypothetical protein VCE_000124 [Vibrio cholerae B33]
 gi|229357930|gb|EEO22847.1| hypothetical protein VCF_000918 [Vibrio cholerae BX 330286]
 gi|229371381|gb|ACQ61804.1| hypothetical protein VCD_003648 [Vibrio cholerae MJ-1236]
 gi|254846710|gb|EET25124.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255738499|gb|EET93888.1| hypothetical protein VCH_000163 [Vibrio cholera CIRS 101]
 gi|262021706|gb|EEY40417.1| hypothetical protein VIJ_003235 [Vibrio cholerae RC27]
 gi|262030123|gb|EEY48768.1| hypothetical protein VIG_001308 [Vibrio cholerae INDRE 91/1]
 gi|297535213|gb|EFH74048.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297540568|gb|EFH76626.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|327483473|gb|AEA77880.1| Protein of unknown function DUF81 [Vibrio cholerae LMA3894-4]
          Length = 264

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 95/196 (48%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           GI   I M +A+ TSL  I  TS  S + H + G +++ ++K  +  + +   + S++  
Sbjct: 43  GISTEIVMQLALATSLATIILTSGSSALNHLKLGNVDVFVVKWLMPGVVVGGFLGSVVAE 102

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +   +L K F +  L + + M +  R       P  ++  + G   G +S   G+GGG 
Sbjct: 103 WIPSQYLPKVFGVIVLCLSVQMYRSIRALQNHPMPSAWITTLCGTGIGVISSLAGIGGGS 162

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            +   +  +G  + KA  +S+     IA   ++  I  G+ +  LP +SLG+V + A+L 
Sbjct: 163 LSVPFLNRHGIEMKKAIGSSSVCGFAIAISGMIGFILHGYQVENLPQYSLGYVYLPALLA 222

Query: 240 ILPISILITPLATKLS 255
           I   S+L T +  KL+
Sbjct: 223 IATTSMLTTRIGAKLA 238


>gi|33593832|ref|NP_881476.1| putative integral membrane protein [Bordetella pertussis Tohama I]
 gi|33597092|ref|NP_884735.1| putative integral membrane protein [Bordetella parapertussis 12822]
 gi|33600936|ref|NP_888496.1| putative integral membrane protein [Bordetella bronchiseptica RB50]
 gi|33563905|emb|CAE43164.1| putative integral membrane protein [Bordetella pertussis Tohama I]
 gi|33566543|emb|CAE37799.1| putative integral membrane protein [Bordetella parapertussis]
 gi|33575371|emb|CAE32448.1| putative integral membrane protein [Bordetella bronchiseptica RB50]
 gi|332383251|gb|AEE68098.1| putative integral membrane protein [Bordetella pertussis CS]
          Length = 272

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 9/230 (3%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L+  F   G+   + +H A+ TS+  I  TSV S   H++ GTI   I    ++ + 
Sbjct: 32  VPFLTMLFAWQGMPGDLVVHAAIATSMTSILFTSVSSVRAHQKRGTIQWSI----VWAMA 87

Query: 109 ITTVVTSLM-----ISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG 163
              ++  L+      + +  ++L+  FA+F    G  ML+  +    R+ P        G
Sbjct: 88  PGIIIGGLLSGGAVFAALSTAWLSLFFALFVGYSGWNMLRSKKPKASRQMPGIVGTSAAG 147

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
              GFLSG +G GGG  +   M++   +++ A +TSA +   IA    +  + SG   + 
Sbjct: 148 AGIGFLSGLVGAGGGFLSVPFMVWCNVALHTAVSTSAALGFPIALANSVGYVISGLNESV 207

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
             P  LG++   A+L ++  S+L  PL  ++++ +    L   F+ ++F 
Sbjct: 208 TRPGMLGYIYWPALLALVATSVLTAPLGARMAHRLPVGTLKRVFATLLFA 257


>gi|260219577|emb|CBA26422.1| hypothetical protein Csp_E35100 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 290

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 1/224 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+      G+   I + +A+ TS+  I  TS+ S   H + G +   ++K     + +
Sbjct: 54  PFLTWILTSRGVPADIAVKMAIATSMATIMFTSISSVRAHHQRGAVRWDVVKRLAPGIVL 113

Query: 110 TTVVTSLMISHVDK-SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
              + SL +  + K + L   FA+F       M    +    R+ P    ++  G V GF
Sbjct: 114 GGALASLGVFALLKGTTLALLFALFIGYSATQMFLDKKPKPNRQMPGTAGQWAAGSVIGF 173

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LSG +G GGG  +   M+ +   I  A ATSA +   IA       + +G  L GLP WS
Sbjct: 174 LSGLVGAGGGFVSVPFMVAHNILIINAVATSAALGFPIALANTSGYVLAGLTLPGLPAWS 233

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           LG+V +  + +I   S+   PL  + ++ +    L   F+ +++
Sbjct: 234 LGYVWLPGLAVIAACSVWTAPLGARTAHRLPVAKLKRVFACVLY 277


>gi|218437446|ref|YP_002375775.1| hypothetical protein PCC7424_0441 [Cyanothece sp. PCC 7424]
 gi|218170174|gb|ACK68907.1| protein of unknown function DUF81 [Cyanothece sp. PCC 7424]
          Length = 266

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 126/245 (51%), Gaps = 17/245 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           SG ++GL G+GGG+V+VP L   FQLMGI  ++ MH+AMGTS+ V+  T+  S   H+  
Sbjct: 17  SGLMAGLLGIGGGMVIVPGLFFIFQLMGIPHNLLMHLAMGTSMCVMICTATASTWTHQLK 76

Query: 93  GTINMKILKDWIFVLPITT-VVTSLMI-----SHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           G I       W F+L I   +   LMI      H+    L   F  F L + + +L + +
Sbjct: 77  GDIR------WDFLLKILPGIFLGLMIGSSASQHLSTRLLECIFGFFLLFVSVKILLKGK 130

Query: 147 LYCERKFPDNYVKYI--WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
           L  +++     + +I   G + G  SG LG+GGG  +   +++ G  + +   TSA  S 
Sbjct: 131 LTTQKQSQSPKLSFINLMGTIIGLKSGLLGIGGGAISIPFLIYCGLPMTEVAGTSASFSL 190

Query: 205 LIA-FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            I+      + I++    N   P S+G++   AVL+I P ++    + TKLS++I  + +
Sbjct: 191 PISILGTFSLGIFATTESNF--PLSIGYIYWPAVLMIAPFTMFGASIGTKLSHLIPAETM 248

Query: 264 TIGFS 268
              F+
Sbjct: 249 RFIFA 253


>gi|254786077|ref|YP_003073506.1| membrane protein [Teredinibacter turnerae T7901]
 gi|237685847|gb|ACR13111.1| membrane protein [Teredinibacter turnerae T7901]
          Length = 272

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 1/223 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   FQL+GI  +  M VA GTSL +I PTSV S   H + G I+ ++++ W   + +
Sbjct: 35  PVLYFIFQLIGISAATAMTVATGTSLLIIIPTSVSSIRAHHKRGNIDSQLVRLWWPFIVL 94

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V+  +  +          F I  +L+   +M + +        P    + +   V G 
Sbjct: 95  GVVLGVVFATEAGGQVAAIIFGIVAILVAANMMFRANAQPLFSSLPGKLWQSVIAAVIGL 154

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+GGG      +       ++A  T+A    +IA P   + +  G      P  +
Sbjct: 155 VSVVMGIGGGTLGVPTLSACNFPAHRAVGTAAVFGFIIALPGAALLLVYGSTPPDAPLGT 214

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +G VN+    +I+P+++L+ P+  KL  M+    L   F++ +
Sbjct: 215 IGVVNLLGFAVIVPLTVLMAPVGVKLGAMLNDVLLKRTFAVFL 257


>gi|27363981|ref|NP_759509.1| hypothetical protein VV1_0518 [Vibrio vulnificus CMCP6]
 gi|27360098|gb|AAO09036.1| Protein of unknown function DUF81 [Vibrio vulnificus CMCP6]
          Length = 263

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 119/229 (51%), Gaps = 1/229 (0%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+++ +F+ G ++GL G+GGGL++VP L       GI   + MH+A+ TSL  I  TS  
Sbjct: 9   LLVLGAFV-GVMAGLLGIGGGLIVVPALLYLLPWAGIPTELSMHMALATSLASIIVTSGS 67

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + H + G +++ ++K  +  + I   V + +   +   +L + F +  L + + M + 
Sbjct: 68  SALNHLKLGNVDIFVVKWLMPGVVIGGFVGANIAEWIPTQYLPRVFGVIVLFLALQMFRS 127

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            R+   R  P + V  ++G   G +S   G+GGG  +   +  +G  + KA  +S+    
Sbjct: 128 IRVTTTRAMPSSPVTMLYGTGIGVVSSLAGIGGGSLSVPFLNRHGVEMRKAVGSSSVCGC 187

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +IA   +   I  G+ +  LP +S+G+V + A+L I   S+L T +  +
Sbjct: 188 VIAIAGMTGFILHGYSVASLPDYSVGYVYLPALLAIAGTSMLTTRIGAR 236


>gi|209694163|ref|YP_002262091.1| integral membrane protein [Aliivibrio salmonicida LFI1238]
 gi|208008114|emb|CAQ78256.1| integral membrane protein [Aliivibrio salmonicida LFI1238]
          Length = 267

 Score = 72.8 bits (177), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 96/208 (46%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP L       GI   I M +A+GTSL  I  TS  S + H R G +  K++K     +
Sbjct: 34  VVPALLWLLPQAGISPDIVMQMALGTSLATIILTSASSALNHLRLGNVEFKLIKGLAPGV 93

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            +   + S     +   +L K F +  LL+ + ML   +    R  P      I G   G
Sbjct: 94  IVGGFLGSYAAELIPSQYLPKVFGVIVLLLALQMLLALKFTATRPLPSPLKVGISGGFIG 153

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S   G+GGG  T   + F+G  + KA  +S+    LIA   ++  I  G  ++ LPP 
Sbjct: 154 VISSLAGIGGGSLTVPYLNFHGVEMRKAIGSSSLCGMLIAMAGMIGFIIHGAQVSDLPPM 213

Query: 228 SLGFVNIGAVLIILPISILITPLATKLS 255
           SLG+V + A+  +   SI  T +  KL+
Sbjct: 214 SLGYVYLPALCGVGLTSIFTTRIGAKLT 241


>gi|325144541|gb|EGC66840.1| putative membrane protein [Neisseria meningitidis M01-240013]
          Length = 268

 Score = 72.8 bits (177), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  ++ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAIMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F  ++  
Sbjct: 65  FTAFSSMLGQHKKRAVDWKTVFAMMPGMIFGVFAGALSAKYIPAFGLQIFFILFLTVVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L        R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGPQTASRPLPKLPGLTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKKSFGIML 256


>gi|161870192|ref|YP_001599362.1| hypothetical protein NMCC_1232 [Neisseria meningitidis 053442]
 gi|161595745|gb|ABX73405.1| conserved hypothetical protein [Neisseria meningitidis 053442]
          Length = 268

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 114/252 (45%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFVAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFAMMPGMIFGVFAGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L        R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGPQTASRPLPKLPGLTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKKSFGIML 256


>gi|119947276|ref|YP_944956.1| hypothetical protein Ping_3677 [Psychromonas ingrahamii 37]
 gi|119865880|gb|ABM05357.1| hypothetical protein DUF81 [Psychromonas ingrahamii 37]
          Length = 267

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 106/229 (46%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP+L+  F   G+     +H+A+GTS+  +  TS  S   H  +  +   I+K     
Sbjct: 31  IMVPILTTIFLAQGLPVEKVVHLALGTSMASMIFTSFSSMRAHNSNDAVIWVIVKGISLG 90

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + + T   + + S +D  +L   F+IF   + I M    +   ++    N   +  G   
Sbjct: 91  VLLGTFFATFVASKIDSIYLAIFFSIFMAYVSIQMFLNKKPQPDKNISGNKEIFFAGTGI 150

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  + +GGG  T   +++   +I KA  TSA +   I+    L  + +GW    +  
Sbjct: 151 GAISAFVSIGGGSLTVPYLVWRNINIKKAVGTSAAIGLPISIAGTLGYLINGWSNTSVEN 210

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           ++ GF+ + AV++I   S    P   KL++ +    L   FS+++ T S
Sbjct: 211 YTFGFIYLPAVVLISITSFFSAPYGVKLAHYLPVSVLKKIFSLLLITLS 259


>gi|262401628|ref|ZP_06078194.1| hypothetical protein VOA_003178 [Vibrio sp. RC586]
 gi|262352045|gb|EEZ01175.1| hypothetical protein VOA_003178 [Vibrio sp. RC586]
          Length = 264

 Score = 72.4 bits (176), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 6/199 (3%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV---VTSL 116
           G+   I M +A+ TSL  I  TS  S + H + G +++ ++K W+  +P   V     S 
Sbjct: 43  GVSAEITMQLALATSLATIILTSGSSALNHLKLGNVDLFVVK-WL--MPGVVVGGFFGSA 99

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
           +   +   +L K F +  L + + M +  R+      P+  +  + G   G +S   G+G
Sbjct: 100 VAEWIPSQYLPKVFGVIVLCLSVQMFRSIRMQQHHPMPNALITTLCGTGIGVVSSLAGIG 159

Query: 177 GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           GG  +   +  +G  + KA  +S+     IA   ++  I  G+ +  LP +S+G+V + A
Sbjct: 160 GGSLSVPFLNRHGIEMKKAVGSSSVCGFAIAISGMIGFILHGYQVENLPQYSIGYVYVPA 219

Query: 237 VLIILPISILITPLATKLS 255
           +L I   S+L T +  KL+
Sbjct: 220 LLAIATTSMLTTRIGAKLA 238


>gi|148978523|ref|ZP_01814975.1| hypothetical protein VSWAT3_08481 [Vibrionales bacterium SWAT-3]
 gi|145962312|gb|EDK27593.1| hypothetical protein VSWAT3_08481 [Vibrionales bacterium SWAT-3]
          Length = 263

 Score = 72.4 bits (176), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 10/212 (4%)

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV---VTSLM 117
           I     M +A+ TSL  I  TS  S + H + G + + ++K W+  +P   V   + S +
Sbjct: 44  IPQEFAMQMALATSLSTIIVTSGSSAINHLKLGNVEIFVVK-WL--MPGVVVGGFLGSFV 100

Query: 118 ISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
              +   +L K F +  L++ + ML   R   ++  P +    + G   G +S   G+GG
Sbjct: 101 ADVIPSQYLPKVFGVIVLVLALQMLLSIRSKSQKAMPGSATTMLCGGGIGLVSSLAGIGG 160

Query: 178 GIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
           G  +   +  +G  + KA  +S+    +IA   +L  I+ G  + GLP +SLG+V + A+
Sbjct: 161 GSLSVPFLNHHGVEMRKAVGSSSVCGFVIAISGMLGFIWHGSSVEGLPAFSLGYVYLPAL 220

Query: 238 LIILPISILIT----PLATKLSYMIGKKYLTI 265
           + I   S+L T     LAT+L   + KK+  +
Sbjct: 221 VAISCTSVLTTRVGAKLATQLPTPVLKKFFAV 252


>gi|225024689|ref|ZP_03713881.1| hypothetical protein EIKCOROL_01571 [Eikenella corrodens ATCC
           23834]
 gi|224942578|gb|EEG23787.1| hypothetical protein EIKCOROL_01571 [Eikenella corrodens ATCC
           23834]
          Length = 270

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 108/225 (48%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V VP++  +    GI      H+A+GTS+ V+  T+  S    ++ G +  + ++     
Sbjct: 31  VTVPIVLWSLGRQGITGEHGQHLAVGTSMAVMVFTTFSSAWAQQKKGAVRWEFVRRMAPG 90

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           L   +++ SL+ + +    L   F +FC  +    L +         P   ++   G + 
Sbjct: 91  LVAGSLLGSLVSNRIPTFGLQVLFIVFCYSVAAKNLFQLNPKPAATLPSGRMQAGIGGLF 150

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G LS  +G+GGG  +   M++    +++A ATS+ ++  IA    L  ++SGW + GLP 
Sbjct: 151 GLLSSWVGIGGGSLSVPFMMYCRVPVHQAVATSSVLAWPIAVSGALGYLFSGWNVPGLPA 210

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            ++GF  +  ++++   ++L  PL  K ++ +    L   F ++M
Sbjct: 211 GAVGFWYVPCIVVLGACTVLFAPLGVKAAHRLPPAGLKRAFGVLM 255


>gi|127511973|ref|YP_001093170.1| hypothetical protein Shew_1040 [Shewanella loihica PV-4]
 gi|126637268|gb|ABO22911.1| protein of unknown function DUF81 [Shewanella loihica PV-4]
          Length = 264

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 1/227 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL     + G+      HVA+ TSL  I  T   S   H   G I   +L   +  L 
Sbjct: 31  VPVLLFLLPMAGVVPEHLTHVAIATSLAAIILTGASSARAHHARGNIPWHLLTIMLPGLI 90

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-KRDRLYCERKFPDNYVKYIWGMVTG 167
           +  +    + S      L + FA F +LM + M+        ER  P +   ++  M   
Sbjct: 91  VGALSAGFISSLFSAQLLKQVFAGFLVLMALQMVFPFKAAEGERSLPASPYLFVTAMFVA 150

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            ++  +G+GGGI     + + G  +  A   S+    +IA    L  +++GW   GLP +
Sbjct: 151 IIAALMGIGGGILFIPFLTWCGVQMRHAIGFSSVTGLMIALFGSLSYVFAGWATQGLPEY 210

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +LG++ + A+  I+  S+L  PL  K + +     L   F++++F T
Sbjct: 211 TLGYIYLPALFGIVCTSMLTAPLGAKAASVWPTARLKKIFAVMLFFT 257


>gi|262377564|ref|ZP_06070785.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
 gi|262307451|gb|EEY88593.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
          Length = 190

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 3/178 (1%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + I  +++ +F +G  +GLFGVGGG ++VP+L   F  MG D  + MH+A+GTSL  I  
Sbjct: 2   ELITFLVIGAF-AGFAAGLFGVGGGTIIVPLLFIVFTQMGYDPDVVMHLALGTSLATIVV 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS+ S M H + G +   + K+    + I     + +   +    L     +F + +   
Sbjct: 61  TSISSLMAHHKTGAVIWPVFKNLAPPMAIGCFFGAGIAGLISGLHLQIIVGLFLIWVAYT 120

Query: 141 ML--KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           M    +  +   +  P +  +   G V G  S   G+GGG  T   +  YG  + KA 
Sbjct: 121 MFTGAKKAIDPTKTLPSSGQQVAAGSVIGVASAIFGIGGGSLTVPYLNRYGVVMQKAE 178


>gi|325128385|gb|EGC51268.1| putative membrane protein [Neisseria meningitidis N1568]
          Length = 268

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 114/252 (45%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFAMMPGMIFGVFAGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L        R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGPQTASRPLPGLPGLTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKKSFGIML 256


>gi|261401261|ref|ZP_05987386.1| putative membrane protein [Neisseria lactamica ATCC 23970]
 gi|269208743|gb|EEZ75198.1| putative membrane protein [Neisseria lactamica ATCC 23970]
          Length = 268

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           + I L++     SG ++GLFGVGGG ++VPV+       G+       H+A+GTS  V+ 
Sbjct: 5   EIILLLLSVGSASGFIAGLFGVGGGALIVPVVLWVLGYQGLAQHPYAQHLAIGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   I  +     + SL   ++   +L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFMMIPGMIFGVFLGSLSAKYIPTFWLQIFFILFFTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L           P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 RTLHSGHQTASHPLPKLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIRCGFPTHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G+S  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLSWPIALAGAISYLLNGLKVGGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHHLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKKSFGIML 256


>gi|309379248|emb|CBX22205.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 268

 Score = 72.0 bits (175), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           + I L++     SG ++GLFGVGGG ++VPV+       G+       H+A+GTS  V+ 
Sbjct: 5   EIILLLLSVGSASGFIAGLFGVGGGALIVPVVLWVLGYQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   I  +     + SL   ++   +L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFMMIPGMIFGVFLGSLSAKYIPTFWLQIFFILFFTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L           P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 RTLHSGHQTASHPLPKLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIRCGFPTHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G+S  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLSWPIALAGAISYLLNGLKVGGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHHLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKKSFGIML 256


>gi|325134441|gb|EGC57086.1| putative membrane protein [Neisseria meningitidis M13399]
          Length = 268

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 114/252 (45%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKRAVDWKTVFAMMPGMIFGVFTGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L        R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGPQTASRPLPGLPGLTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLINGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKKSFGIML 256


>gi|163803534|ref|ZP_02197403.1| fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF
           domain containing protein [Vibrio sp. AND4]
 gi|159172669|gb|EDP57522.1| fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF
           domain containing protein [Vibrio sp. AND4]
          Length = 263

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 122/234 (52%), Gaps = 1/234 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I L+ + +F+ G ++GL G+GGGL++VP L     L GI   + MH+A+ TSL  I  T
Sbjct: 6   FILLLALGAFV-GVMAGLLGIGGGLIVVPALLYLLPLAGIPSEMSMHMALATSLASIIVT 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  S + H + G ++M ++K  +  + I   V + +   +   +L K F +  L +   M
Sbjct: 65  SGSSALNHLKLGNVDMFVIKWLMPGVVIGGFVGANIAEWIPTHYLPKVFGVIVLCLAAQM 124

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
            +  +   E+  P + V  ++G   G +S   G+GGG  +   +  +G  + KA  +S+ 
Sbjct: 125 FRSIKTKSEKPMPSSPVTVMYGTGIGVVSSLAGIGGGSLSVPFLNKHGIEMRKAVGSSSV 184

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
              +IA   ++  I  G+ +  LP +SLG+V + A+  I   S+L T +  K++
Sbjct: 185 CGCVIAISGMIGFIIHGYNVEELPDYSLGYVYLPALAAIAMTSMLTTKVGAKIA 238


>gi|192361859|ref|YP_001981099.1| hypothetical protein CJA_0576 [Cellvibrio japonicus Ueda107]
 gi|190688024|gb|ACE85702.1| hypothetical integral membrane protein [Cellvibrio japonicus
           Ueda107]
          Length = 275

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 6/221 (2%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL    Q +G+  +  M VA GTSL VI PTS+ S   H + G ++  ++K W   + I
Sbjct: 39  PVLYFVLQGLGVSPATAMLVATGTSLLVIVPTSISSMRAHHKRGNVDWALIKRWWPWMVI 98

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR-LYCERKFPDNYVKYIWGMVTGF 168
             +  S +        L+  F +  +L+ + ML R +     R+ P    +       GF
Sbjct: 99  GVIAGSSVALRAKGLLLSTVFGVIAILVALNMLLRAKSPPLARQLPGAVGQGSMAGGIGF 158

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
            S  +GVGGG     L+       ++A  T++    LI+ P  L  +++    +  P   
Sbjct: 159 FSVMMGVGGGTIGVPLLTACNYPSHRAVGTASFFGLLISIPGALAMLFASTPADA-PEGM 217

Query: 229 LGFVNIGAVLIILPISILITP----LATKLSYMIGKKYLTI 265
           +G VN+    +I+P+++L+ P    L  KL  ++ K+   +
Sbjct: 218 IGAVNLPGFALIVPLTVLLAPVGAWLGAKLDAVMLKRVFAV 258


>gi|293604356|ref|ZP_06686763.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292817233|gb|EFF76307.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 273

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 5/228 (2%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L+  F   G+   + +H A+ TS+  I  TS+ S   H++ GTI   I+  W     
Sbjct: 32  VPFLTMLFAWQGMPPELVVHAAIATSMTSILFTSISSVRAHQQRGTIKWNIV--WAMAPG 89

Query: 109 ITT---VVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
           I     V    + + +   +L+  FA+F    G  ML+  +    R+ P        G  
Sbjct: 90  IIIGGLVSGGAVFAALSTLWLSLFFALFVGYSGWSMLRNKKPKPARQMPGVVGTSAAGAG 149

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            GFLSG +G GGG  +   M++   +++ A +TSA +   IA    +  + SG       
Sbjct: 150 IGFLSGLVGAGGGFLSVPFMVWCNVALHNAVSTSAALGFPIALANSVGYVVSGLNEGTSR 209

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
           P  LG++   A+L ++  S+L  PL  ++++ +  + L   F+ ++F 
Sbjct: 210 PGMLGYIYWPALLALVCTSVLTAPLGARMAHRLPVQTLKRVFACLLFA 257


>gi|219850938|ref|YP_002465370.1| protein of unknown function DUF81 [Methanosphaerula palustris
           E1-9c]
 gi|219545197|gb|ACL15647.1| protein of unknown function DUF81 [Methanosphaerula palustris
           E1-9c]
          Length = 277

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 11/229 (4%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SGLFGVGGG ++VP+        G+   + + ++  TSL VI PT+V     H     I+
Sbjct: 22  SGLFGVGGGFILVPIQYWLLTASGLSADLAIRISFATSLAVILPTAVSGTYAHHCRRCIH 81

Query: 97  MKILKDWIFVLPITTVVTS----LMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
                D +  + +T  V S    L+ +H+    L   FA+  +L    M   D   CE  
Sbjct: 82  W----DAVVWMGVTAAVVSYLGALLATHLPARPLEVIFAVVLILGAFRMYFADLPSCEIA 137

Query: 153 FPDNYVK--YIWGMVTGF-LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
              N  +   +WG+  GF        GG +   ++++F    I+ A  TS  +    A  
Sbjct: 138 SVVNSRRTYLLWGIPVGFISGLLGIGGGILMVPVMVVFLRFPIHHAIGTSTPIILFTAAG 197

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
            L+  I +G G+ GLPP+SLG+VN+   LI+   +I +  +   L++ +
Sbjct: 198 GLISYIINGIGVAGLPPYSLGYVNLINALILAVATIPMAQVGAWLAHRV 246


>gi|313668456|ref|YP_004048740.1| hypothetical protein NLA_11540 [Neisseria lactamica ST-640]
 gi|313005918|emb|CBN87375.1| conserved hypothetical integral membrane protein [Neisseria
           lactamica 020-06]
          Length = 268

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           + I L++     SG ++GLFGVGGG ++VPV+     L G+        +A+GTS  V+ 
Sbjct: 5   EIILLLLSVGSASGFIAGLFGVGGGALIVPVVLWVLDLQGLAQHPYAQQLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +     + SL   ++   +L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFMMMPGMIFGVFLGSLSAKYIPTFWLQIFFILFFTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L           P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 RTLHSGHQTASHPLPKLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIRCGFPTHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G+S  IA    +  + +G  + GLP  SLGF+ + AV I+   +I   PL  K ++ + 
Sbjct: 185 SGLSWPIALAGAISYLLNGLKVGGLPEGSLGFLYLPAVAILSAATIAFAPLGVKTAHHLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKKSFGIML 256


>gi|262190227|ref|ZP_06048502.1| hypothetical protein VIH_000597 [Vibrio cholerae CT 5369-93]
 gi|262033896|gb|EEY52361.1| hypothetical protein VIH_000597 [Vibrio cholerae CT 5369-93]
          Length = 264

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 94/196 (47%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           GI   I M +A+ TSL  I  TS  S + H   G +++ ++K  +  + +   + S++  
Sbjct: 43  GISTEIVMQLALATSLATIILTSGSSALNHLMLGNVDVFVVKWLMPGVVVGGFLGSVVAE 102

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +   +L K F +  L + + M +  R       P  ++  + G   G +S   G+GGG 
Sbjct: 103 WIPSQYLPKVFGVIVLCLSVQMYRSIRALQNHPMPSAWITTLCGTGIGVISSLAGIGGGS 162

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            +   +  +G  + KA  +S+     IA   ++  I  G+ +  LP +SLG+V + A+L 
Sbjct: 163 LSVPFLNRHGIEMKKAIGSSSVCGFAIAISGMIGFILHGYQVENLPQYSLGYVYLPALLA 222

Query: 240 ILPISILITPLATKLS 255
           I   S+L T +  KL+
Sbjct: 223 IATTSMLTTRIGAKLA 238


>gi|307824887|ref|ZP_07655109.1| protein of unknown function DUF81 [Methylobacter tundripaludum
           SV96]
 gi|307733934|gb|EFO04789.1| protein of unknown function DUF81 [Methylobacter tundripaludum
           SV96]
          Length = 263

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 124/255 (48%), Gaps = 12/255 (4%)

Query: 26  IIVASFLSGTLSGLFG----VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           I +AS L GT+SGL      +GGGL++VPVL+  F   G    + M +++ TSL  I  T
Sbjct: 4   IFLASLLLGTVSGLMAGLFGIGGGLIIVPVLAVLFAGQGFPTELVMIMSVATSLATIIFT 63

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVL-P---ITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           S+ S + H R  +    +L D +  + P   I   V +++  H+    L   F I+ L +
Sbjct: 64  SISSVLAHHRLNS----VLWDKVLAMGPGIMIGAAVGAVVADHIAGDVLRFIFIIYLLSV 119

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           G+ M  + +    ++ P   + +    + G LS  LG+GGG  T   ++ +   +  A A
Sbjct: 120 GVQMALQFKPKPGQQQPSKELDFGVAGIMGLLSSLLGIGGGTLTVPFLVHFQTPMRNAVA 179

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            ++     +A    +     G   + LP WSLG++ + + L I+  S    P+  KL++ 
Sbjct: 180 IASACGLPLALVGTVGYALLGKDASQLPEWSLGYIYVPSFLGIVLTSTYTAPIGAKLAHK 239

Query: 258 IGKKYLTIGFSMIMF 272
           +  + L   FS+++F
Sbjct: 240 LPAEKLKRYFSLLLF 254


>gi|253701036|ref|YP_003022225.1| hypothetical protein GM21_2424 [Geobacter sp. M21]
 gi|251775886|gb|ACT18467.1| protein of unknown function DUF81 [Geobacter sp. M21]
          Length = 263

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 1/210 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VPVL+  F    + ++  +H+A+GTSL  I  TSV S   H R G +   +++     
Sbjct: 28  VIVPVLTFIFTAQHLPEAHILHLALGTSLASIMFTSVSSLRAHHRRGAVEWTVVRRMSAG 87

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + + T   S + S +   FL   F +F   + + ML   +    R+ P        G V 
Sbjct: 88  ILVGTFSGSWVASQLSTRFLKGFFVVFLYYVALQMLLNIKPKPHRQLPGLTAMSGVGGVI 147

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  +G+GGG  T   +++   ++ +A  TS+ V   IA       + +G   N LP 
Sbjct: 148 GGVSSLVGIGGGTMTVPFLVWCNLALPRAIGTSSAVGFPIALAGAAGYLVNGLSAN-LPQ 206

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSY 256
           +SLGFV + A+  I   S++  PL  KL++
Sbjct: 207 YSLGFVYLPALAGISAASMVTAPLGAKLAH 236


>gi|317484741|ref|ZP_07943641.1| hypothetical protein HMPREF0179_00993 [Bilophila wadsworthia 3_1_6]
 gi|316923993|gb|EFV45179.1| hypothetical protein HMPREF0179_00993 [Bilophila wadsworthia 3_1_6]
          Length = 268

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 17/220 (7%)

Query: 45  GLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWI 104
            ++++P+L+  F  +G       H+++GTSL  I  TS+ S + HRR+G++   I K   
Sbjct: 27  AVIIMPLLNVFFDRLGFSVDTTQHLSLGTSLATILFTSLSSVLAHRRYGSVRADIWKKMA 86

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-------KRDRLYCERK-FPDN 156
             +   T+  +L+  H+   FL   FA F +L+G+ +L       K  RL  ER   P +
Sbjct: 87  PGIIAGTLGGALLAPHLPGLFLRGFFAFFVMLVGVHLLFNSTPRPKTGRL--ERAMLPVS 144

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
                  ++ G +S   G+ G +   + +++       A  TSA +S  I+    L    
Sbjct: 145 -------ILIGLISSLAGIAGTMLCVIFLVWAAIDWADAVGTSAALSLPISLTGTLGYAI 197

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           +GW    LPP+S+GFV +  +  +L  S+ +  +  +L++
Sbjct: 198 AGWNFPELPPYSVGFVYLPGMFCLLVSSMSMAVVGARLAH 237


>gi|311105116|ref|YP_003977969.1| hypothetical protein AXYL_01921 [Achromobacter xylosoxidans A8]
 gi|310759805|gb|ADP15254.1| hypothetical protein AXYL_01921 [Achromobacter xylosoxidans A8]
          Length = 272

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 108/230 (46%), Gaps = 9/230 (3%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L+  F   G+   + +H A+ TS+  I  TS+ S   H++ GTI   I    ++ + 
Sbjct: 32  VPFLTMLFAWKGMPADLVVHAAIATSMTSILFTSISSVRAHQQRGTIKWNI----VWAMA 87

Query: 109 ITTVVTSLM-----ISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG 163
              +V  L+      + +   +L+  FA+F    G  ML+  +    R+ P        G
Sbjct: 88  PGIIVGGLLSGGAVFAALSTLWLSLFFALFVGYSGWSMLQNKKPKPSRQMPGVVGTSAAG 147

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
              GFLSG +G GGG  +   M++   +++ A +TSA +   IA    +  + SG     
Sbjct: 148 AGIGFLSGLVGAGGGFLSVPFMVWCNVALHNAVSTSAALGFPIALANSVGYVVSGLNSGE 207

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
             P  LG++   A++ ++  S+L  PL  ++++ +  + L   F+ ++F 
Sbjct: 208 ARPGMLGYIYWPALIALVCTSVLTAPLGARMAHRLPVQTLKRVFACLLFA 257


>gi|113461757|ref|YP_719826.1| permease [Haemophilus somnus 129PT]
 gi|170718528|ref|YP_001783738.1| hypothetical protein HSM_0389 [Haemophilus somnus 2336]
 gi|112823800|gb|ABI25889.1| conserved hypothetical protein [Haemophilus somnus 129PT]
 gi|168826657|gb|ACA32028.1| protein of unknown function DUF81 [Haemophilus somnus 2336]
          Length = 264

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 5/193 (2%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     ++G+ D++ M  A+GTS   I  TS  S   H + G +    +K  I  L 
Sbjct: 31  VPTLVYLLPMVGVPDNLLMSTALGTSFATIVITSFSSAQRHYKLGNVVWDAVKILIPTLM 90

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKF-PDNYVKYIWGMV 165
           ++T V + ++S +DKS  +K FA+    M I M+   + ++   +K  P + V  I G++
Sbjct: 91  LSTFVFTGIVSQLDKSLSSKLFAVLVAYMAIRMVISTKIQIKNTKKLTPLSSV--IGGVL 148

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            G +S   G+GGG F    +   G  I KA  +SA    L+     L  + SGWG+  +P
Sbjct: 149 IGIVSSIAGIGGGGFIVPFLNSRGVDIKKAIGSSAVCGMLLGLSGALSFMRSGWGVTEMP 208

Query: 226 PWSLGFVNIGAVL 238
            +SLG+V + AVL
Sbjct: 209 EYSLGYVYLPAVL 221


>gi|307246830|ref|ZP_07528896.1| hypothetical protein appser1_20210 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307255814|ref|ZP_07537616.1| hypothetical protein appser9_20360 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307260266|ref|ZP_07541974.1| hypothetical protein appser11_20480 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306852301|gb|EFM84540.1| hypothetical protein appser1_20210 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306861277|gb|EFM93269.1| hypothetical protein appser9_20360 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306865713|gb|EFM97593.1| hypothetical protein appser11_20480 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 258

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 108/214 (50%), Gaps = 2/214 (0%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           CL++ ++   G L+GLFG+GGGL++VP L     L G+     M  A+GTS   I  T+ 
Sbjct: 3   CLVVGSAV--GFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTIVVTAF 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S   H + G +++++ K +I  L ++  +  L +S++D   ++K FA+  L +   ML 
Sbjct: 61  SSAQRHHKLGNVDVQVSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLAARMLF 120

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             +   E K        + G V G LS   G+ GG F    +   G  + +A  TS+   
Sbjct: 121 SLKKTPEIKPLTTQSTIVAGGVIGALSSMAGIAGGAFIVPFLNSRGLEMKRAIGTSSFCG 180

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
           A +     +  I SGW +  +P +SLG+V + A+
Sbjct: 181 AFLGLSGTISFIASGWNVETMPDYSLGYVYLPAL 214


>gi|296314494|ref|ZP_06864435.1| putative membrane protein [Neisseria polysaccharea ATCC 43768]
 gi|296838796|gb|EFH22734.1| putative membrane protein [Neisseria polysaccharea ATCC 43768]
          Length = 268

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 113/252 (44%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFVAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFAMMPGMIFGVFAGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L        R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGPQTASRPLPKLPGLTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +    PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATSAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SAKLKKSFGIML 256


>gi|114331943|ref|YP_748165.1| hypothetical protein Neut_1971 [Nitrosomonas eutropha C91]
 gi|114308957|gb|ABI60200.1| protein of unknown function DUF81 [Nitrosomonas eutropha C91]
          Length = 266

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 7/216 (3%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           VMVPVL+  F  +G  D   +H+A+GT+  +I  TS+ S   H  HG +N  ++    ++
Sbjct: 28  VMVPVLASIFISLGFPDDRVLHMALGTTTAIITLTSISSLRAHHAHGAVNWWVV---CYI 84

Query: 107 LP---ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG 163
            P      +  S + SH+    L+    +F       M    +       P     +  G
Sbjct: 85  SPGIVAGALAGSTLASHLSSQILSIILVLFISFAATRMWFNLKPGKNYTLPGKIGMFAAG 144

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN- 222
            V G +SG + +GGG+ T   ++     ++ A  T+A V   +A  +      +G   N 
Sbjct: 145 GVIGAISGLVSIGGGMLTVPFLVACQIRLHHAIGTAAAVGFPVALASAAGYAANGLLQNK 204

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
            LP +SLG++ + A++I+   SI+  PL  + +Y++
Sbjct: 205 QLPDYSLGYIYLPALIIVALTSIVTAPLGARTAYIL 240


>gi|157374273|ref|YP_001472873.1| hypothetical protein Ssed_1134 [Shewanella sediminis HAW-EB3]
 gi|157316647|gb|ABV35745.1| protein of unknown function DUF81 [Shewanella sediminis HAW-EB3]
          Length = 267

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 1/208 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VPVL       G +  +  HVA+ TSL  I  TS  S   H R G I   + K  +  
Sbjct: 32  IAVPVLLYLLPSAGFELGVLPHVAIATSLSAIILTSCSSAFAHHRRGNIPWPLFKPMLPG 91

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK-FPDNYVKYIWGMV 165
           L I    +  +   +    L + FAIF +LM + M+   R+  E K  P     +I    
Sbjct: 92  LIIGASCSGFISHAISADTLQQTFAIFVILMAVQMVFPLRVAGEEKPMPAASTLFIASAA 151

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
               +  +G+GGGI     + + G  +  A   SA     IA    +  + +GW +  LP
Sbjct: 152 IASFAALMGIGGGILLVPFLSWCGLQMRNAIGFSAASGVFIALFGSVGYVLAGWNVTDLP 211

Query: 226 PWSLGFVNIGAVLIILPISILITPLATK 253
           P +LG+V + A+L I+  S+ + P+  +
Sbjct: 212 PGTLGYVYLPALLGIIITSVTMAPVGVR 239


>gi|32034236|ref|ZP_00134447.1| COG0730: Predicted permeases [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126209356|ref|YP_001054581.1| hypothetical protein APL_1896 [Actinobacillus pleuropneumoniae L20]
 gi|126098148|gb|ABN74976.1| hypothetical protein APL_1896 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 263

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 2/215 (0%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           CL++ ++   G L+GLFG+GGGL++VP L     L G+     M  A+GTS   I  T+ 
Sbjct: 8   CLVVGSAV--GFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTIVVTAF 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S   H + G +++ + K +I  L ++  +  L +S++D   ++K FA+  L +   ML 
Sbjct: 66  SSAQRHHKLGNVDVLVSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLAARMLF 125

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             +   E K        + G V G LS   G+ GG F    +   G  + +A  TS+   
Sbjct: 126 SLKKTPEIKPLTTQFTIVAGGVIGALSSMAGIAGGAFIVPFLNSRGLEMKRAIGTSSFCG 185

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
           A +     +  I SGW +  +P +SLG+V + A+L
Sbjct: 186 AFLGLSGTISFIASGWNVETMPDYSLGYVYLPALL 220


>gi|165977340|ref|YP_001652933.1| permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|307262396|ref|ZP_07544042.1| hypothetical protein appser12_19370 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|165877441|gb|ABY70489.1| predicted permease [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
 gi|306867944|gb|EFM99774.1| hypothetical protein appser12_19370 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 263

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 2/215 (0%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           CL++ ++   G L+GLFG+GGGL++VP L     L G+     M  A+GTS   I  T+ 
Sbjct: 8   CLVVGSAV--GFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTIVVTAF 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S   H + G +++ + K +I  L ++  +  L +S++D   ++K FA+  L +   ML 
Sbjct: 66  SSAQRHHKLGNVDVLVSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLAARMLF 125

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             +   E K        + G V G LS   G+ GG F    +   G  + +A  TS+   
Sbjct: 126 SLKKTPEIKPLTTQSTIVAGGVIGALSSMAGIAGGAFIVPFLNSRGLEMKRAIGTSSFCG 185

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
           A +     +  I SGW +  +P +SLG+V + A+L
Sbjct: 186 AFLGLSGTISFIASGWNVETMPDYSLGYVYLPALL 220


>gi|152978405|ref|YP_001344034.1| hypothetical protein Asuc_0727 [Actinobacillus succinogenes 130Z]
 gi|150840128|gb|ABR74099.1| protein of unknown function DUF81 [Actinobacillus succinogenes
           130Z]
          Length = 263

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 96/214 (44%), Gaps = 2/214 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL     L G+ DS+ M  A+GTS   I  T   S   H R G I    LK +   + 
Sbjct: 31  VPVLVYLLPLAGVPDSLLMTTALGTSFATIIVTGASSAYNHYRMGNIRWSSLKVFAPTIM 90

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           I T + SL +S++ +   +K FA   + +   M+   +     K        I G V G 
Sbjct: 91  IATYLASLFVSNLPRELASKIFAALVVYLATKMILSVKSKMGDKPLTAQAAIIGGSVIGI 150

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS   G+GGG F    +   G  + +A  +S+    L+A    L  I SGW    +P WS
Sbjct: 151 LSSGAGIGGGGFIVPFLNSRGYEMRQAIGSSSFCGMLLALSGTLSYITSGWNNVNMPDWS 210

Query: 229 LGFVNIGAVLIILPISILITPLA--TKLSYMIGK 260
           LG+V + A+L I+  S+  T     T  +  + K
Sbjct: 211 LGYVYLPAMLGIVATSMFTTKFGVITATNLPVAK 244


>gi|148982261|ref|ZP_01816680.1| hypothetical protein VSWAT3_23914 [Vibrionales bacterium SWAT-3]
 gi|145960573|gb|EDK25928.1| hypothetical protein VSWAT3_23914 [Vibrionales bacterium SWAT-3]
          Length = 246

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 7/220 (3%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGI--DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           + G+GGGL++VPVLS     + +   D + +  A+ TSL  I  TS  S + H ++G + 
Sbjct: 1   MLGIGGGLIIVPVLSSILLYLDVLPSDQVVV-AAIATSLASILFTSTSSALAHHKNGNVP 59

Query: 97  MKILKDWIFV-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKF 153
              L  WI + + +  +V+  M + + +  +   FA+  +L+ I M    +     ERK 
Sbjct: 60  WD-LAPWIMLGVALGALVSGFMAALLPEKVVRIVFAVSVVLIAIKMFLSSKSDAPKERKL 118

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
           P+  +  +   +TG LS  +G+GGG+    L+ F+   + KA   ++    +IA    + 
Sbjct: 119 PNKGLLTVLTTITGGLSAMIGIGGGVLLVPLLTFFSVDMKKAIGCASACGIVIALFGSIG 178

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            I SG     L     GFV + A+L I+  S    PL  K
Sbjct: 179 YITSGSSHFALTDGFAGFVYLPALLGIVCTSWFTAPLGAK 218


>gi|15668617|ref|NP_247415.1| hypothetical protein MJ_0441 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2495987|sp|Q57883|Y441_METJA RecName: Full=UPF0721 transmembrane protein MJ0441
 gi|1591145|gb|AAB98428.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 267

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 9/248 (3%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+  F+ G L  LFG+GGG ++ P+L+  F   GI D +    A+GTSL V+   S++S 
Sbjct: 17  IIVGFIVGILGSLFGIGGGFLVAPILTFIFDYFGIPDGV--KFAVGTSLFVVFINSIISI 74

Query: 87  MEHRRHGTINMKI-LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
             H +   IN K  +   I  L  +     L+++ +D + L K F IF +   I M K  
Sbjct: 75  FRHAKIKNINWKASITIGIISLVFSYFSGFLVVNFIDSAILKKLFGIFLIANAIYMAKSH 134

Query: 146 RLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            +       D    +I  G++TGFLSG  G+GGGI    ++      + +A A S GV  
Sbjct: 135 HIDKISDREDKLEPFILCGVITGFLSGLFGIGGGIVIIPILAMAKYPVKRAVAISVGVIP 194

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII-LPISILITPLATKLSYMIGKKYL 263
           L +   L+   Y      G   +++G+V+I   LI+ +PI I  + L  K++  I  K+L
Sbjct: 195 LTSIGGLIS--YLTANTEGY-IYNIGYVSIPIALIMAIPI-IYSSKLGIKINQKISPKHL 250

Query: 264 TIGFSMIM 271
            I  S I+
Sbjct: 251 RIMLSSIL 258


>gi|118579808|ref|YP_901058.1| hypothetical protein Ppro_1384 [Pelobacter propionicus DSM 2379]
 gi|118502518|gb|ABK99000.1| protein of unknown function DUF81 [Pelobacter propionicus DSM 2379]
          Length = 264

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 102/225 (45%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L  AF   G  ++  +H+A+GTSL  I  TSV S   H     ++  +++     +  
Sbjct: 31  PLLVFAFSGQGFPEAHLLHMALGTSLATIMFTSVASMRAHHSRNAVDWPVVRRISPGIVA 90

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T + S + +H+   FL   F  F   +   ML        R+ P +      G + G +
Sbjct: 91  GTFLGSWVAAHLTTGFLKIFFTCFMYFVAAQMLLNVSPPAGRRIPGSSGLIGAGSLIGMV 150

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   + +       A  TSA +   IA    +  I +G  +  LP  SL
Sbjct: 151 SSLVGIGGGTLSVPFLQWCNLPFKTAIGTSAAIGFPIALAGTVGYIVNGLFVPDLPTASL 210

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           GF+++ A++ +   S L  PL  +L++ +    L   F++++  T
Sbjct: 211 GFIHLPALVGVAAASFLTAPLGARLAHSLPVPKLKKIFALLLIAT 255


>gi|90021097|ref|YP_526924.1| hypothetical protein Sde_1450 [Saccharophagus degradans 2-40]
 gi|89950697|gb|ABD80712.1| protein of unknown function DUF81 [Saccharophagus degradans 2-40]
          Length = 286

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 128/264 (48%), Gaps = 15/264 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I +++ A  ++G L+GLFGVGGG+V+VP L   F+ M +  +  + +A+GTSL  + PT+
Sbjct: 9   ILVLLFAGLVAGFLAGLFGVGGGIVIVPALYALFRWMEVSANSAISIAVGTSLVTLLPTA 68

Query: 83  VMSFMEHRRHGTINMKILKDWI--FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             S   H + G +N  IL  WI  F+L    + +SL+++   +  L     +  L+  I 
Sbjct: 69  CSSLRAHYKLGNVNKNILL-WIAPFILMGAIIASSLVVAQFGRLLLFVFSGVLLLVACIT 127

Query: 141 MLKRDRLY-CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-----------LMLFY 188
           +++  R+      +  N    + G++   ++   G   G+ ++L           ++L  
Sbjct: 128 IVRTYRITPAVEHYTINAEPTLKGVLIRVMASIAGFLIGLSSSLAGVGGGATGVPVLLGL 187

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
           G   + A  T++    L+A P+++  +   +     P      V I  ++++   ++L+ 
Sbjct: 188 GLRTHAAIGTASSFGVLVALPSIIALLLFSYSPADAPWGCWKQVYIPGLVVLSFCTVLVA 247

Query: 249 PLATKLSYMIGKKYLTIGFSMIMF 272
           P   +L   I +K L + F+ ++F
Sbjct: 248 PYGARLGKKISEKRLKVFFASLLF 271


>gi|322515436|ref|ZP_08068426.1| permease [Actinobacillus ureae ATCC 25976]
 gi|322118527|gb|EFX90762.1| permease [Actinobacillus ureae ATCC 25976]
          Length = 263

 Score = 69.3 bits (168), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 6/192 (3%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     + G+     M  A+GTS   I  T+  S   H + G ++  + K +I  + 
Sbjct: 31  VPSLVYLLPMAGVTPENLMSAALGTSFSTIVITAFSSAQRHHKLGNVDWNVSKIFIPSIM 90

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMG---ILMLKRDRLYCERKFPDNYVKYIWGMV 165
           I+  +  L+IS +D   ++K FAI  + +    I  LK+++   + K        I G V
Sbjct: 91  ISVFLAGLVISGLDAKLMSKLFAIMVIYLAGRMIFSLKKEQ---KIKPLTTQGTIIAGGV 147

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            G LS   G+GGG F    +   G  + +A  TS+   A +     +  I SGW +  +P
Sbjct: 148 IGALSSVAGIGGGAFIVPFLNSRGLEMKRAIGTSSFCGAFLGLSGTVSFIASGWNVASMP 207

Query: 226 PWSLGFVNIGAV 237
            +SLG+V + A+
Sbjct: 208 DYSLGYVYLPAL 219


>gi|300113325|ref|YP_003759900.1| hypothetical protein Nwat_0623 [Nitrosococcus watsonii C-113]
 gi|299539262|gb|ADJ27579.1| protein of unknown function DUF81 [Nitrosococcus watsonii C-113]
          Length = 274

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 4/223 (1%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+V VL   F   GI + + MH+A+GTS   I  TS+ +   H R   +   I+      
Sbjct: 28  VIVAVLVHLFSAQGIGNGLTMHMAIGTSQATIVMTSIAAIWAHHRQRGVLWPIMAAMASG 87

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + +  ++ +++   +    L   F  F LL+   M            P  ++  + G + 
Sbjct: 88  IVLGALLGAVIAEALSGQVLKGLFGSFALLIAWRMGVDIHPAAVHSLPRRWILALMGALI 147

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S   G+GGG  T   ++++   +  A  T++     +A       ++ GW   GLP 
Sbjct: 148 GTVSALFGIGGGSLTVPYLVWHSIPMRNAVGTASACGFPLAVSGTCGFVWMGWDKLGLPA 207

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSY----MIGKKYLTI 265
           WS G+V   A + I+  S+L  PL  +L++    +  K+   I
Sbjct: 208 WSSGYVYWPAAVSIVATSMLFAPLGARLAHRLASITLKRIFAI 250


>gi|74318691|ref|YP_316431.1| hypothetical protein Tbd_2673 [Thiobacillus denitrificans ATCC
           25259]
 gi|74058186|gb|AAZ98626.1| conserved hypothetical membrane protein [Thiobacillus denitrificans
           ATCC 25259]
          Length = 268

 Score = 68.9 bits (167), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 12/220 (5%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL    Q  G+   I   VA+ TSL  I  TS+ S   H R G +      DW+ V  I
Sbjct: 36  PVLILLLQGQGLAPGIEPQVALATSLASILFTSLSSVRAHHRRGAV------DWLLVRRI 89

Query: 110 T------TVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG 163
           T      T+  +L+ + V    L   F  F       M    +    R  P      + G
Sbjct: 90  TPGILAGTLAGALLAAEVSALLLKLFFVAFLFYAAFQMWLDFKPAPHRALPARPGMTLAG 149

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            V G +S  +G+GGG  +   ML++  ++++A ATSA +   IA          G G+ G
Sbjct: 150 AVIGAVSSWVGIGGGTLSVPFMLWHNVALHRAIATSAAIGFPIALAGTAGYALGGLGVTG 209

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            PP S GFV + A+  I+  S++  PL  + ++ +  + L
Sbjct: 210 RPPASAGFVYLPALAGIVLGSVVTAPLGARTAHRMPVRTL 249


>gi|323700683|ref|ZP_08112595.1| protein of unknown function DUF81 [Desulfovibrio sp. ND132]
 gi|323460615|gb|EGB16480.1| protein of unknown function DUF81 [Desulfovibrio desulfuricans
           ND132]
          Length = 266

 Score = 68.9 bits (167), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 117/251 (46%), Gaps = 4/251 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y+CL  VA  L+G L    G+    V+VP+L+ AF+          H+A+GTS+  I  T
Sbjct: 8   YVCLGAVAGVLAGLLGIGGGL----VIVPMLNFAFEWQHFPMEHIQHIALGTSMATIIFT 63

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H + G IN          + I T + S + S +  +FL   F +F   +   M
Sbjct: 64  SISSMRAHHKRGAINYTAFWRLAPGIIIGTYLGSWIASLLSTTFLKIFFGLFLYYVATQM 123

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L   +     + P     +  G   G  S  +G+GGG  T   + +   +++ A AT+A 
Sbjct: 124 LLNIKPKAAHELPGKAGTFAAGSGIGVFSALVGIGGGTLTVPFLSWCNLTMHAAIATAAA 183

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           V   IA       I +GW + G+P   +G+V I A+L I+  S L  P   KL++ +   
Sbjct: 184 VGLPIALAGTTGYIVNGWSVQGIPGPHIGYVYIPALLGIIVTSTLTAPFGAKLAHSLPVT 243

Query: 262 YLTIGFSMIMF 272
            L   F++++F
Sbjct: 244 KLKKIFAILLF 254


>gi|77165969|ref|YP_344494.1| hypothetical protein Noc_2511 [Nitrosococcus oceani ATCC 19707]
 gi|254436359|ref|ZP_05049865.1| conserved domain protein, putative [Nitrosococcus oceani AFC27]
 gi|76884283|gb|ABA58964.1| Protein of unknown function DUF81 [Nitrosococcus oceani ATCC 19707]
 gi|207088049|gb|EDZ65322.1| conserved domain protein, putative [Nitrosococcus oceani AFC27]
          Length = 274

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 6/215 (2%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS-FMEHRRHGTI--NMKILKDW 103
           V+V VL   F   GI   + MH+A+GTS   I  TS+ + +  HRR G +   M  +   
Sbjct: 28  VIVAVLVHLFSAQGIGKGLSMHMALGTSQATIVMTSIAAIWAHHRRRGVLWPTMVAMAPG 87

Query: 104 IFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG 163
           I    +  ++ +++   +    L   F  F LL+   M            P  ++  + G
Sbjct: 88  IV---LGALLGAIIAEALSGQILKGLFGSFALLIAWRMGVGIHPAALHPLPRRWILALIG 144

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            + G +S   G+GGG  T   ++++   +  A  T++     +A       ++ GW   G
Sbjct: 145 ALIGTVSALFGIGGGSLTVPYLVWHSIPMRNAVGTASACGFPLAVSGTCGFVWMGWDKLG 204

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           LP WS G+V   A + I+  S+L  PL  +L++ +
Sbjct: 205 LPAWSSGYVYWPAAVSIVATSMLFAPLGARLAHRL 239


>gi|190151252|ref|YP_001969777.1| hypothetical protein APP7_1983 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303249676|ref|ZP_07335881.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307251168|ref|ZP_07533090.1| hypothetical protein appser4_19280 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307253586|ref|ZP_07535454.1| hypothetical protein appser6_20770 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307258002|ref|ZP_07539755.1| hypothetical protein appser10_19830 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|189916383|gb|ACE62635.1| hypothetical protein APP7_1983 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|302651488|gb|EFL81639.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306856834|gb|EFM88968.1| hypothetical protein appser4_19280 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858966|gb|EFM91011.1| hypothetical protein appser6_20770 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306863549|gb|EFM95479.1| hypothetical protein appser10_19830 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 263

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 2/214 (0%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           CL++ ++   G L+GLFG+GGGL++VP L     L G+     M  A+GTS   I  T+ 
Sbjct: 8   CLVVGSAV--GFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTIVVTAF 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S   H + G +++ + K +I  L ++  +  L +S++D   ++K FA+  L +   ML 
Sbjct: 66  SSAQRHHKLGNVDVLVSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLAARMLF 125

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             +   E K        + G V G LS   G+ GG F    +   G  + +A  TS+   
Sbjct: 126 SLKKTPEIKPLTTQSTIVAGGVIGALSSMAGIAGGAFIVPFLNSRGLEMKRAIGTSSFCG 185

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
           A +     +  I SGW +  +P +SLG+V + A+
Sbjct: 186 AFLGLSGTISFIASGWNVETMPDYSLGYVYLPAL 219


>gi|33151424|ref|NP_872777.1| hypothetical protein HD0173 [Haemophilus ducreyi 35000HP]
 gi|33147644|gb|AAP95166.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
          Length = 263

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 88/192 (45%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           L++VP L      +G+     M  A+GTS   I  T+  S   H + G ++++I +  I 
Sbjct: 28  LIIVPSLVYLLPTVGVMPENLMATALGTSFATIVITAFSSAQRHNKLGNVDVRISRYLIP 87

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
            L ++  + SL+ISH+D     K FA+  + +   M+       + K        + G+ 
Sbjct: 88  ALMVSVFLASLLISHLDPKLTTKIFAVMVIYLAARMVFSLHKTVKIKPLTTSTTLMAGVT 147

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            G +S   G+ GG F    +   G ++  A  TS+   A +     L  + SGW    LP
Sbjct: 148 IGAISSMAGIAGGAFIVPFLNNRGLNMRAAIGTSSFCGAFLGLAGALSYMLSGWNSANLP 207

Query: 226 PWSLGFVNIGAV 237
            +SLG+V + A+
Sbjct: 208 AYSLGYVYLPAL 219


>gi|307264603|ref|ZP_07546185.1| hypothetical protein appser13_19900 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|306870066|gb|EFN01828.1| hypothetical protein appser13_19900 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 258

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 2/214 (0%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           CL++ ++   G L+GLFG+GGGL++VP L     L G+     M  A+GTS   I  T+ 
Sbjct: 3   CLVVGSAV--GFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTIVVTAF 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S   H + G +++ + K +I  L ++  +  L +S++D   ++K FA+  L +   ML 
Sbjct: 61  SSAQRHHKLGNVDVLVSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLAARMLF 120

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             +   E K        + G V G LS   G+ GG F    +   G  + +A  TS+   
Sbjct: 121 SLKKTPEIKPLTTQSTIVAGGVIGALSSMAGIAGGAFIVPFLNSRGLEMKRAIGTSSFCG 180

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
           A +     +  I SGW +  +P +SLG+V + A+
Sbjct: 181 AFLGLSGTISFIASGWNVETMPDYSLGYVYLPAL 214


>gi|319425547|gb|ADV53621.1| protein of unknown function DUF81 [Shewanella putrefaciens 200]
          Length = 266

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 99/208 (47%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           L++VP L      +GI  S   H+A+ TSL  I  TS+ S   H + G I   + K  + 
Sbjct: 31  LIVVPALLYILPSVGISSSQLPHIAIATSLAAIILTSISSARAHHKRGNIPWSLFKSMLP 90

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
            L +  + +  +   +    L + FAIF +LM I M+   +    R+ P+ +V +I    
Sbjct: 91  GLVLGALASGFIAERIPADTLQRGFAIFVILMTIQMVYPFKTESNRQLPNAFVLFIASAF 150

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
              L+G  G+GGGI     + FYG  + +A   SA +  LI+       I +G     LP
Sbjct: 151 IAVLAGLTGIGGGILVVPFLTFYGLQMRQAVGFSAAMGFLISLSGSFGYIIAGMDAPELP 210

Query: 226 PWSLGFVNIGAVLIILPISILITPLATK 253
             ++GF+ + A+  ++  SI + P+  K
Sbjct: 211 YGTVGFIYLPALFGLIITSIFMAPVGVK 238


>gi|134096092|ref|YP_001101167.1| hypothetical protein HEAR2933 [Herminiimonas arsenicoxydans]
 gi|133739995|emb|CAL63046.1| Putative permease [Herminiimonas arsenicoxydans]
          Length = 287

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 98/209 (46%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
            +VP+++  F          +H+A+ T +  IA TS  S  EH +   ++  I+K     
Sbjct: 51  TLVPIIAALFAAQHFAPDHVVHMALATCMASIAFTSGSSVREHLKFDGVDFNIVKRMTPG 110

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           L I +++ + + + + +  L  +FA+        ++   +    R  P     ++ GMV 
Sbjct: 111 LVIGSLLATSVSAWIPQRHLALSFAVIVFFGATQIMLNKKPQAARPLPAAGPLFLVGMVI 170

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G ++G +  GG   T   ML+ G  + K   T A +   +A    +  I SGW +  LP 
Sbjct: 171 GIIAGLVSAGGAFLTIPFMLWCGVPMKKTIGTGALMGIPLAVVGTIGYIISGWNVPDLPS 230

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLS 255
            ++GF++I A++ I+  S++  P   +L+
Sbjct: 231 DAIGFISITALIGIVCGSVVTAPFGARLA 259


>gi|329918092|ref|ZP_08276520.1| hypothetical protein IMCC9480_2868 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327544443|gb|EGF30008.1| hypothetical protein IMCC9480_2868 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 267

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 26/238 (10%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP ++           + +HVA+ TSL  I  TSV S + H R G +   I+K     + 
Sbjct: 32  VPFITALLTYKDFPKELIIHVAIATSLATIMFTSVSSVVAHHRRGAVRWDIVKLLAPGIL 91

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           I + V   +   ++ + L   FA+F       ML   +    R  P N            
Sbjct: 92  IGSWVGPWIGQQMNSATLAMFFAVFVTFSAAQMLFDKKPSGTRGLPGN------------ 139

Query: 169 LSGALGVGGGI------------FTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            +G    GGGI            F ++  M +    I+ A ATSA +   IA    L  I
Sbjct: 140 -AGMFAAGGGIGVLAGLVGAGGGFVSVPFMTWCQVKIHNAVATSAALGFPIALAGTLSNI 198

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
           Y G  +  LP  SLG++ + A+L+I   S++  PL  K ++ +  K L   F++++F+
Sbjct: 199 YFGLSIPDLPSGSLGYIYLPALLVISMASVVTAPLGAKAAHALPVKTLKKIFAVMLFS 256


>gi|303253816|ref|ZP_07339950.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|302647339|gb|EFL77561.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
          Length = 263

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 2/215 (0%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           CL++ ++   G L+GLFG+GGGL++VP L     L  +     M  A+GTS   I  T+ 
Sbjct: 8   CLVVGSAV--GFLAGLFGIGGGLIIVPSLVYLLPLASVTPENLMAAALGTSFSTIVVTAF 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S   H + G +++ + K +I  L ++  +  L +S++D   ++K FA+  L +   ML 
Sbjct: 66  SSAQRHHKLGNVDVLVSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLAARMLF 125

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             +   E K        + G V G LS   G+ GG F    +   G  + +A  TS+   
Sbjct: 126 SLKKTPEIKPLTTQSTIVAGGVIGALSSMAGIAGGAFIVPFLNSRGLEMKRAIGTSSFCG 185

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
           A +     +  I SGW +  +P +SLG+V + A+L
Sbjct: 186 AFLGLSGTISFIASGWNVETMPDYSLGYVYLPALL 220


>gi|307248970|ref|ZP_07530979.1| hypothetical protein appser2_19320 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306854516|gb|EFM86710.1| hypothetical protein appser2_19320 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 258

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 2/215 (0%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           CL++ ++   G L+GLFG+GGGL++VP L     L  +     M  A+GTS   I  T+ 
Sbjct: 3   CLVVGSAV--GFLAGLFGIGGGLIIVPSLVYLLPLASVTPENLMAAALGTSFSTIVVTAF 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S   H + G +++ + K +I  L ++  +  L +S++D   ++K FA+  L +   ML 
Sbjct: 61  SSAQRHHKLGNVDVLVSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLAARMLF 120

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             +   E K        + G V G LS   G+ GG F    +   G  + +A  TS+   
Sbjct: 121 SLKKTPEIKPLTTQSTIVAGGVIGALSSMAGIAGGAFIVPFLNSRGLEMKRAIGTSSFCG 180

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
           A +     +  I SGW +  +P +SLG+V + A+L
Sbjct: 181 AFLGLSGTISFIASGWNVETMPDYSLGYVYLPALL 215


>gi|120599817|ref|YP_964391.1| hypothetical protein Sputw3181_3020 [Shewanella sp. W3-18-1]
 gi|146292247|ref|YP_001182671.1| hypothetical protein Sputcn32_1144 [Shewanella putrefaciens CN-32]
 gi|120559910|gb|ABM25837.1| protein of unknown function DUF81 [Shewanella sp. W3-18-1]
 gi|145563937|gb|ABP74872.1| protein of unknown function DUF81 [Shewanella putrefaciens CN-32]
          Length = 266

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 99/208 (47%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           L++VP L      +GI  S   H+A+ TSL  I  TS+ S   H + G I   + K  + 
Sbjct: 31  LIVVPALLYILPSVGISSSQLPHIAIATSLAAIILTSISSARAHHKRGNIPWSLFKSMLP 90

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
            L +  + +  +   +    L + FAIF +LM I M+   +    R+ P+ +V ++    
Sbjct: 91  GLVLGALASGFIAERIPADTLQRGFAIFVILMTIQMVYPFKTESNRQLPNAFVLFVASAF 150

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
              L+G  G+GGGI     + FYG  + +A   SA +  LI+       I +G     LP
Sbjct: 151 IAVLAGLTGIGGGILVVPFLTFYGLQMRQAVGFSAAMGFLISLSGSFGYIIAGMDAPELP 210

Query: 226 PWSLGFVNIGAVLIILPISILITPLATK 253
             ++GF+ + A+  ++  SI + P+  K
Sbjct: 211 YGTVGFIYLPALFGLIITSIFMAPVGVK 238


>gi|260913762|ref|ZP_05920238.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260632301|gb|EEX50476.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 263

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 113/216 (52%), Gaps = 2/216 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +CLI+ A  + G L+GLFG+GGGL++VP+L     ++G+ D + M  A+GTS   I  TS
Sbjct: 7   VCLILGA--IIGFLAGLFGIGGGLIIVPMLVYLLPMVGVPDPLLMSTALGTSFATIVVTS 64

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H + G I    +K  +  + ITT +  L IS +DK+  +K F+   + + I ML
Sbjct: 65  FSSAHRHHQLGNIVWSAVKVLVPTVMITTFICGLFISKLDKAIASKVFSCLVIYLAIKML 124

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +     K        I G++ G  S A G+GGG F    +   G  + KA  +SA  
Sbjct: 125 LSIKPNTITKPLTTLSSVIGGVLIGIASCAAGIGGGGFIVPFLNSRGIEMKKAIGSSAFC 184

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
             L+    +L  + SGW +  +P +S+G+V + AV+
Sbjct: 185 GTLLGLSGMLSFMLSGWNMPNMPEYSVGYVYLPAVV 220


>gi|325982313|ref|YP_004294715.1| hypothetical protein NAL212_1679 [Nitrosomonas sp. AL212]
 gi|325531832|gb|ADZ26553.1| protein of unknown function DUF81 [Nitrosomonas sp. AL212]
          Length = 265

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 107/233 (45%), Gaps = 11/233 (4%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++VPVL   F          MH+A+GT++  I  TS+ S   H +HG +N +I+++    
Sbjct: 28  ILVPVLITVFTAQNFPVDRIMHMALGTTMATIIFTSITSLRTHHQHGAVNWQIVRNITPG 87

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + + T   + +   +    L+  F IF       ML + R     + P      + G V 
Sbjct: 88  IFLGTFGGATLAGSMTGQLLSSIFVIFIFYAATQMLLQFRPSPMFQLPGRIGLLLAGGVI 147

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG--- 223
           G LS  + +GGG+ +   +      +  A  T+A +   IA    +     G+ +NG   
Sbjct: 148 GALSSLVAIGGGLLSIPFLTLCKIKLQHAIGTAAAIGFPIALAGTI-----GYVVNGLIQ 202

Query: 224 ---LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
              LP  SLG+V++ A++ ++  S+L  PL  +L++      L   F +++++
Sbjct: 203 SDPLPANSLGYVHLPALIWLVSASMLTAPLGARLTHSTQTAILRTIFVVLLYS 255


>gi|91794131|ref|YP_563782.1| hypothetical protein Sden_2780 [Shewanella denitrificans OS217]
 gi|91716133|gb|ABE56059.1| protein of unknown function DUF81 [Shewanella denitrificans OS217]
          Length = 264

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 4/207 (1%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV--MSFMEHRRHGTINMKILKDWIFV 106
           VP L      +G++     H+A+ TSL  I  TS+   S    R +  I   +    +  
Sbjct: 31  VPALLYLLPWVGVESQQLTHMAIATSLASIILTSMSAASAHHKRAN--IPWPLFNTIMPG 88

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + +  ++   +   +  + L + FAIF +LM + M    +    R  P   V +   +V 
Sbjct: 89  IILGALMAGFISEQISSAALQQVFAIFVILMALQMAFPIKPQAGRGLPSGQVLFGLSVVI 148

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
             L+G +G+GGG+    L+ ++G ++ +A   S+    LIA    L  + +G+    LP 
Sbjct: 149 ALLAGMMGIGGGVLMVPLLSYFGLAMRQAVGLSSATGFLIALSGSLGYVVAGFDATHLPD 208

Query: 227 WSLGFVNIGAVLIILPISILITPLATK 253
           +SLG++ + A+L I+  S+L  PL  K
Sbjct: 209 YSLGYIYLPALLGIVITSMLAAPLGVK 235


>gi|149926219|ref|ZP_01914481.1| hypothetical protein LMED105_01763 [Limnobacter sp. MED105]
 gi|149825037|gb|EDM84249.1| hypothetical protein LMED105_01763 [Limnobacter sp. MED105]
          Length = 289

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 6/226 (2%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L+      G+     +H ++ TSL +I  TS+ S   H + G +   I+K   F+ P
Sbjct: 52  VPFLTFLMVSQGVPVEHVVHSSIATSLAIIMFTSISSMRAHHKAGAVRWDIVK---FLTP 108

Query: 109 ---ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
              I     S ++S++    L   F  F +     M    +    R  P        G +
Sbjct: 109 GILIGGFAGSKVVSYLPTKELALVFGAFVIFSAYQMYADKKPKPTRTLPGKTGLAAVGSL 168

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            G  S  +G GGG  +   M++   ++  A ATSA +   IA  + +  + +G  L G+P
Sbjct: 169 IGAASAIVGAGGGFLSVPFMVWSNINLRNAVATSAALGFPIAVFSSVAYVINGQHLQGMP 228

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
             SLG+V + AV  +  +S+L  P   +L++ +  K +   F++++
Sbjct: 229 TGSLGYVYLPAVGCVAAMSVLFAPYGARLAHTLPVKKIKRIFALLL 274


>gi|261377741|ref|ZP_05982314.1| putative membrane protein [Neisseria cinerea ATCC 14685]
 gi|269146024|gb|EEZ72442.1| putative membrane protein [Neisseria cinerea ATCC 14685]
          Length = 268

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 1/252 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           + I L++     +G ++GLFGVGGG ++VPV+       G+       H+A+GTS  V+ 
Sbjct: 5   EIILLLLSVGSAAGFIAGLFGVGGGTLIVPVVLWVLGYQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +     + SL   ++   +L   F +F   +  
Sbjct: 65  FTTFSSMLGQHKKQAVDWKTVFIMMPGMIFGVFLGSLSAKYIPTFWLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L           P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 RTLHTGHQTASHPLPKLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIRCGFPTHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + A+ ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALAGAVSYLLNGLKVEGLPEGSLGFLYLPAIGVLSVATITFAPLGVKAAHKLS 244

Query: 260 KKYLTIGFSMIM 271
              L   F +++
Sbjct: 245 SGKLKKSFGIML 256


>gi|85713215|ref|ZP_01044243.1| Predicted permease [Idiomarina baltica OS145]
 gi|85692958|gb|EAQ30928.1| Predicted permease [Idiomarina baltica OS145]
          Length = 264

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 18/226 (7%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF- 105
           V+VP+L      +GI+ ++ M  A+ TSL  I  T+  S   H R G       + W+  
Sbjct: 30  VIVPLLVYLAPELGIEPALVMPTAIATSLATICMTTASSAFSHYRSGLQE----RFWVVR 85

Query: 106 VLP---ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYI 161
           VLP   +  +V + +++ VD  +L   F+   +++ I M L + +    R+    ++K  
Sbjct: 86  VLPGLSLGAMVGAFLVTAVDPHWLKMLFSTVLVVLAIRMSLPQSK----REVNAKHIKQR 141

Query: 162 WGMV----TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           W  V     G +SG +G+GGG  T   +   G S+ +A A S+  S +I   A+L+ I  
Sbjct: 142 WLSVGSTSIGVISGLVGIGGGALTVPFLQRCGLSVRQAIAISSLGSFIIGCSAVLIFIIK 201

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           G+  +G+   +LG +++ A L I   S++  P+  KL++ +  K L
Sbjct: 202 GYS-SGVAHGALGIIHVPAWLTISIASVICAPVGAKLAHSLPVKQL 246


>gi|221133981|ref|ZP_03560286.1| hypothetical protein GHTCC_03554 [Glaciecola sp. HTCC2999]
          Length = 269

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 2/218 (0%)

Query: 47  VMVPVLSKAFQ-LMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++VP L+      +GI     + +A+ TSL  I  T + S   H + G +  K +     
Sbjct: 33  IVVPALTYLLSYFLGITPFDAITIAIATSLSTIILTGLSSSRAHYQLGNLEFKTIFFTGL 92

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
            + +  V   L  + +D   L   FA+  +L+ + M+   +           + +I G+ 
Sbjct: 93  GIAVGAVAGGLFATSIDGQLLKGIFAVLVILVALYMIFGKKTASRFSVNRPLLSFI-GLK 151

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           TGF+S  +G+GGG      M+F+   + +A   ++    +IA       + +GW L  LP
Sbjct: 152 TGFISAMMGIGGGAILVPAMMFFQIDMRRAIGCASVSGLIIALFGTASFVIAGWSLPDLP 211

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           P+S+G+V + A + I+  S+   P+  K+   +  + L
Sbjct: 212 PYSMGYVYLPATVGIVLSSVFTAPIGAKMGQTMDTQKL 249


>gi|332994535|gb|AEF04590.1| hypothetical protein ambt_15400 [Alteromonas sp. SN2]
          Length = 268

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 10/220 (4%)

Query: 49  VPVLSKAF-QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           VPVLS       G+     M VA+ TSL  I  T + S   H R G I+   +    F +
Sbjct: 34  VPVLSYLLIHFAGMTVETVMPVAIATSLSTIIFTGMSSAFAHYRLGNIHKPTVLYTGFGI 93

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN----YVKYIWG 163
            I  ++ + + SH+  + L   FA+      ++++    ++ ++K  D+    +V    G
Sbjct: 94  AIGAILGAQIASHISGALLKDIFAVL-----VIIIAAQMIFGKQKTSDSEASPWVLSCVG 148

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
             TG +S  +GVGGG      ++++  +I  A   +A    LIA       + +GW   G
Sbjct: 149 SGTGLISALMGVGGGALLVPALVWFRINIRLAIGCAAFSGLLIAVFGTASFVAAGWQQAG 208

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           +P WSLG+V + A   I+  SI    +  KL   +  + L
Sbjct: 209 MPQWSLGYVYLPATAGIVTTSIFTAGIGAKLGQRVNTRVL 248


>gi|157960851|ref|YP_001500885.1| hypothetical protein Spea_1023 [Shewanella pealeana ATCC 700345]
 gi|157845851|gb|ABV86350.1| protein of unknown function DUF81 [Shewanella pealeana ATCC 700345]
          Length = 266

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 2/231 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           ICL++ A    G ++GL G+GGGL+ VP L      +GI      HVA+ TSL  I  TS
Sbjct: 10  ICLVLGAGI--GFMAGLLGIGGGLIAVPALLHILPQIGIASESLPHVAIATSLAAIILTS 67

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H +   I   + K  +    +  + +  +   +    L + FAIF +LM + M 
Sbjct: 68  LSSARAHHKRQNIPWPLFKSMLPGFVLGAMCSGFISEMIPAKSLQQIFAIFVILMAVQMA 127

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R  P     +        ++  +G+GGG+     + + G  +  A   SA  
Sbjct: 128 FPFKAESNRAMPGPISLFFAATGIAIIAALMGIGGGVLLVPFLTWCGLQMRYAVGFSAAT 187

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
             LIA    +    +GW  + LP W+LG++ + A++ I+  S+L+ P+  +
Sbjct: 188 GLLIASFGSIGYTLAGWNTSSLPEWTLGYIYLPALIGIVSTSMLMAPVGAR 238


>gi|307945365|ref|ZP_07660701.1| membrane protein [Roseibium sp. TrichSKD4]
 gi|307771238|gb|EFO30463.1| membrane protein [Roseibium sp. TrichSKD4]
          Length = 105

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 56/98 (57%)

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
            N  M  YG  I++A  TS+G   +I+ P  +  I++GWG + LPP+S G+VN+  VL+I
Sbjct: 2   NNTFMTLYGRPIHQAVTTSSGTGLMISIPGTIGLIWAGWGADFLPPFSAGYVNLLGVLLI 61

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +P++    P   K ++ + ++ + + F + +   +  F
Sbjct: 62  IPVTTFAAPYGVKFAHALPRRKMEVFFGVFLLVVAARF 99


>gi|319778838|ref|YP_004129751.1| Protein of unknown function DUF81 [Taylorella equigenitalis MCE9]
 gi|317108862|gb|ADU91608.1| Protein of unknown function DUF81 [Taylorella equigenitalis MCE9]
          Length = 247

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 3/214 (1%)

Query: 46  LVMVPVLSKAFQ-LMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWI 104
           +V+VP L+  F     +     +H+++ T++  I  TS+ S   H   G +   I   ++
Sbjct: 1   MVLVPFLTSLFSTFHNLPQQYIVHISIATAMATIMFTSLSSMRAHHLRGGVRWDIFIKFV 60

Query: 105 FVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMGILML-KRDRLYCERKFPDNYVKYIW 162
             + I  +++  ++   +D  +L   FAIF    G  M  K+      R  P  YV  + 
Sbjct: 61  PGILIGGLLSGGVIFKMIDIGWLALVFAIFVSYSGFNMFRKKSEEVSTRALPPAYVIALV 120

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           G+  G +SG +G GGG  T   +++    +  A  TSA     IA   ++  IY G    
Sbjct: 121 GVGIGLISGIVGAGGGFLTVPFLVWCSVPMRNAVGTSAACGFPIAVSNVIGYIYGGMSEI 180

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           G+    +GFV   A+L ++ +S++  P+  KL++
Sbjct: 181 GVQNGLVGFVYWPALLALISMSVIFAPIGAKLAH 214


>gi|254496006|ref|ZP_05108909.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
 gi|254354755|gb|EET13387.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
          Length = 268

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 105/215 (48%)

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
           I  +I MHVA GTSL V+  TS  S   H + G I   +       + I T+  ++    
Sbjct: 49  IPMAIAMHVAAGTSLAVMIITSQASLRAHYQLGDIRWSVYNRLWPGIIIGTISGAIAAQW 108

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
           V   +L   FA F L + + ML   ++    K P  ++ ++     GF SG LG+GGG+ 
Sbjct: 109 VPTYWLQIIFAFFLLGVALKMLMDAKITHSEKSPKPWINHLVSFFIGFKSGLLGIGGGLL 168

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
               +++ G  I K  A S+  +  +A    +V + +G+      P++ G+V   AVL++
Sbjct: 169 IIPYLIYCGVEIRKIAAVSSLCTLTVALIGSMVFMVTGYHETVAIPYTTGYVYWPAVLLV 228

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
              S +  P+  KL+Y++  + L  GF +I+  T+
Sbjct: 229 ATFSSVTAPIGAKLNYIVPVQQLKYGFIVILVLTA 263


>gi|82701746|ref|YP_411312.1| hypothetical protein Nmul_A0613 [Nitrosospira multiformis ATCC
           25196]
 gi|82409811|gb|ABB73920.1| Protein of unknown function DUF81 [Nitrosospira multiformis ATCC
           25196]
          Length = 265

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 17/232 (7%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP- 108
           PVL+  F          +H+A+GT++  I  +S  S   H  HG +N +++K   F+ P 
Sbjct: 31  PVLTFIFTAQDFPPDRILHLALGTTMAAIIFSSAASLRTHHVHGAVNWQVVK---FITPG 87

Query: 109 --ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
             + T+  + ++S +   FL+  F +F       ML   R    R  P        G V 
Sbjct: 88  IILGTLGGATVVSMLSSRFLSIVFVVFIYYAATQMLLNIRPKPSRTLPGRLGMLAAGSVI 147

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG--- 223
           G +S  + +GGG+ T   +      +  A  T+A V   IA    +     G+ +NG   
Sbjct: 148 GAISSFVAIGGGLLTIPFLSLCNVKLQHAIGTAAAVGFPIAVAGGI-----GYMINGMAQ 202

Query: 224 ---LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
              LP +SLG+V + A+  I+  S L  PL  K ++++    L   F ++++
Sbjct: 203 PQPLPEYSLGYVYLPALGWIVLGSTLTAPLGAKTTHVMQTATLRKIFVVLLY 254


>gi|254785410|ref|YP_003072839.1| membrane protein [Teredinibacter turnerae T7901]
 gi|237686180|gb|ACR13444.1| membrane protein [Teredinibacter turnerae T7901]
          Length = 269

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 1/223 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   FQ +G+     M +A GTSL +I  TS+ S   H   G +++ +++ W   + +
Sbjct: 34  PVLFFVFQAIGVSSDSAMLIATGTSLVIIIATSISSIRAHHTKGNVDLALVRLWWPFIVL 93

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR-DRLYCERKFPDNYVKYIWGMVTGF 168
             +   L+ +H+   F +  F    +L+   ML R        + P    + I  ++ G 
Sbjct: 94  GALSGVLLSTHIGGKFASIVFGCTAILVACNMLFRASSAPLLAQLPGKTFQAILAVIIGG 153

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+GGG     L+       ++A  T+A    +IA P   + +         P  +
Sbjct: 154 ISVIMGIGGGTLGVPLLTACNFPAHRAVGTAAAFGFIIAVPGASLLLLLASTPADAPRGT 213

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            GF+N+  V +I+P+S+++ P+  KL  +I    L   F++ +
Sbjct: 214 YGFINLIGVALIMPLSVVMAPVGVKLGSLINGTTLKRIFALFL 256


>gi|145629982|ref|ZP_01785764.1| predicted permease [Haemophilus influenzae R3021]
 gi|144984263|gb|EDJ91686.1| predicted permease [Haemophilus influenzae R3021]
          Length = 142

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 3/136 (2%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I L ++   L+G L+GLFG+GGGLV+VP+L     ++ + +S+ M  A+GTS   I  T
Sbjct: 4   FILLCLLVGALAGFLAGLFGIGGGLVIVPMLVYLLPIVDVPESLLMSTALGTSFATIVIT 63

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG--- 138
            + S   H + G I  + ++    V+  +  +  L I  +D+    K FA   + +    
Sbjct: 64  GIGSAQRHHKLGNIVWQAVRILAPVIMFSVFICGLFIGRLDREISAKIFACLVVYLATKM 123

Query: 139 ILMLKRDRLYCERKFP 154
           +L +K+D++  +   P
Sbjct: 124 VLSIKKDQVTTKPLTP 139


>gi|24372911|ref|NP_716953.1| hypothetical protein SO_1333 [Shewanella oneidensis MR-1]
 gi|24347040|gb|AAN54398.1|AE015577_8 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 255

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 100/208 (48%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           L++VP L      +GI  +   H+A+ TSL  I  TS+ S   H + G +   + K  + 
Sbjct: 20  LIVVPALLYILPSVGISSTQLPHIAIATSLAAIILTSISSARAHHKRGNVPWDLFKSMLP 79

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
            L I  + +  +   +    L K FAIF +LM I M    +    R+ P++ V ++   +
Sbjct: 80  GLIIGALASGFIAERIPADTLQKGFAIFVILMTIQMAYPVKAESNRQLPNSVVLFVVSAL 139

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
              L+G  G+GGGI     + FYG  + +A   SA +  LI+       I +G     LP
Sbjct: 140 VAVLAGLTGIGGGILIVPFLTFYGLQMRQAVGFSAAMGFLISLSGSFGYIIAGMNAPELP 199

Query: 226 PWSLGFVNIGAVLIILPISILITPLATK 253
             +LG++ + A+  ++  S+L+ P+  K
Sbjct: 200 YGTLGYIYLPALFGLVITSVLMAPVGVK 227


>gi|167948520|ref|ZP_02535594.1| hypothetical protein Epers_19116 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 287

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 12/185 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           VD I L++    + G ++GLFGVG GLV+VPVL  +  L+G+++ + +H+A+GTSL  I 
Sbjct: 10  VDSILLLLFLGAVVGIVAGLFGVGAGLVIVPVLIWSLPLLGVEEGLSVHMAVGTSLATIV 69

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV------TSLMISHVDKSFLNKAFAIF 133
            TS+ +   H R G +       W + L +T  +        ++   ++   L + FA+F
Sbjct: 70  FTSIAAVRAHHRRGAVV------WRYFLALTPGILLGAWLGGMIAGGLEGESLRRLFALF 123

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
            L++   M +   L         +     G+  G +S  +G+GGG  T   +   G  + 
Sbjct: 124 LLIVAFRMFREVPLETRYGLVSRWQNSGVGLGIGAISALVGIGGGTLTVPYLNGGGVEVR 183

Query: 194 KATAT 198
           +A AT
Sbjct: 184 RAVAT 188


>gi|296273557|ref|YP_003656188.1| hypothetical protein Arnit_2027 [Arcobacter nitrofigilis DSM 7299]
 gi|296097731|gb|ADG93681.1| protein of unknown function DUF81 [Arcobacter nitrofigilis DSM
           7299]
          Length = 266

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 2/218 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP+ +  F + G +    MH+A+GTS+  I  TS  S   H +   I   +       
Sbjct: 30  IMVPIFTILFAMQGFEHEKIMHLALGTSMATIIFTSFSSMRAHYKKDNIETSMALKIAGG 89

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW-GMV 165
           + + T   + + S++   +L   F +F   +   M  +   Y     P   V  I+ G +
Sbjct: 90  VLVGTFSATFLASYLKGVYLALFFGVFMSYVAFKMFSKPH-YESNPTPHGKVGNIFTGTL 148

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            G +S  + +GGG  T   ++     + +A  TSA V   IA    +    +G+G + L 
Sbjct: 149 IGAISALVSIGGGSLTVPYLVHQNFDMKRAIGTSAAVGFPIAISGTIGYAINGFGNSDLQ 208

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            + +G++ + AV+I+   SI   PL  K + ++  + L
Sbjct: 209 NYIIGYIYMPAVIIVAISSIFTVPLGVKYASILPTQKL 246


>gi|253996420|ref|YP_003048484.1| hypothetical protein Mmol_1048 [Methylotenera mobilis JLW8]
 gi|253983099|gb|ACT47957.1| protein of unknown function DUF81 [Methylotenera mobilis JLW8]
          Length = 278

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 5/234 (2%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           VMVP+L+  F    +     +H+A+GTS+  I  TS+ S   H  +G +   ++K  +  
Sbjct: 30  VMVPMLTAIFLSQNVPADQVVHLALGTSMACIMVTSLSSLRAHHANGAVVWPLVKLMVIG 89

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR----LYCERKFPDNYVKYIW 162
           + + T   + + S +    L   FA F   + I M    +             N ++ + 
Sbjct: 90  VVLGTFSATFIASKISSKALAIFFACFMGYVAIQMFSNSKSGQATSTATHHAINRLELML 149

Query: 163 GMV-TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
             +  G +S  + +GGG  T   + +    I KA  TSA +   ++    L  + SGW  
Sbjct: 150 ASIGIGSISAIVSIGGGSITVPYLTWRKIDIKKAIGTSAAIGFPLSIAGSLGYLLSGWSH 209

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
               P++ GF+N+ AVL+I   S    P+   L+  +    L   F++++ T S
Sbjct: 210 AASIPYTYGFINLPAVLVISITSFFTAPIGANLTQKLPVAMLKKIFALLLATLS 263


>gi|167623003|ref|YP_001673297.1| hypothetical protein Shal_1069 [Shewanella halifaxensis HAW-EB4]
 gi|167353025|gb|ABZ75638.1| protein of unknown function DUF81 [Shewanella halifaxensis HAW-EB4]
          Length = 266

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 88/205 (42%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L       GI      HVA+ TSL  I  TS+ S   H +   I   +LK  +    
Sbjct: 34  VPALLHILPQAGITSDNLPHVAIATSLAAIILTSLSSARAHHKRENIPWSLLKPMLPGFV 93

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           +  + +  +   +    L + FA+F +LM + M    +       P     +    +   
Sbjct: 94  LGALCSGFISEMIAAKSLQQIFAVFVILMAVQMAYPFKAEPNHNMPGQMSLFFAATIIAV 153

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           ++  +G+GGG+     + + G  +  A   S+    LIA    +    +GW    LP W+
Sbjct: 154 IAALMGIGGGVLLVPFLTWCGLQMRFAVGFSSATGLLIASFGSIGYTLAGWNAPSLPDWT 213

Query: 229 LGFVNIGAVLIILPISILITPLATK 253
           LG++ + A++ I+  S+L+ PL  +
Sbjct: 214 LGYIYLPALIGIVSTSMLMAPLGAR 238


>gi|317402804|gb|EFV83348.1| integral membrane protein [Achromobacter xylosoxidans C54]
          Length = 268

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 9/230 (3%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L+  F   G+   + +H A+ TS+  I  TS+ S   H++ GTI  +I    ++ + 
Sbjct: 28  VPFLTMLFAWKGMPADLVVHAAIATSMTSILFTSISSVRAHQQKGTIKWRI----VWAMA 83

Query: 109 ITTVVTSLM-----ISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG 163
              ++  L+      + +   +L+  FA+F    G  ML+  +    R+ P        G
Sbjct: 84  PGIILGGLLSGGAVFAALSTLWLSLFFALFVGYSGWNMLRNKKPKPSRQMPGVVGTSAAG 143

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
              GFLSG +G GGG  +   M++   +++ A +TSA +   IA    +  + SG     
Sbjct: 144 AGIGFLSGLVGAGGGFLSVPFMVWCNVALHNAVSTSAALGFPIALANSIGYVVSGLNEGA 203

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
             P  LG++   A+L+++ +S+L  PL  ++++ +  + L   F+ ++F 
Sbjct: 204 TRPGMLGYIYWPALLVLVCVSVLTAPLGARMAHRLPVQTLKRVFACLLFA 253


>gi|288559619|ref|YP_003423105.1| hypothetical protein mru_0361 [Methanobrevibacter ruminantium M1]
 gi|288559630|ref|YP_003423116.1| hypothetical protein mru_0372 [Methanobrevibacter ruminantium M1]
 gi|288542329|gb|ADC46213.1| hypothetical protein mru_0361 [Methanobrevibacter ruminantium M1]
 gi|288542340|gb|ADC46224.1| hypothetical protein mru_0372 [Methanobrevibacter ruminantium M1]
          Length = 275

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 115/244 (47%), Gaps = 2/244 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y+ L+++    +G ++GL G+GGG+V+ P+       +G D    + V   T L VI  T
Sbjct: 6   YVVLLLIGGCFAGFMAGLLGIGGGIVITPIQYYLLTSIGCDPKTSLTVTFATGLAVICVT 65

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-L 140
            + S  +H+++  I  + LK  +    +  ++ +++  ++D   L   F + C++  + L
Sbjct: 66  MINSTRKHKQNNLIVKQHLKPMMVFGFVGAILGAVISQYIDVEVLKILFGVICIVSTVFL 125

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATS 199
           +L +     +    D  + Y      G  SG +G  GG F   + + +    I     T+
Sbjct: 126 VLIKSPTSLDNIKTDAGLFYSIAFACGLASGLIGPAGGAFIIPIFVAYLRYPITNTIGTT 185

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           + +S       ++  I  GWG+ GLP +SLG+VN+   + +   SI+++  A  LS  I 
Sbjct: 186 SALSIATTLAGVICYIVLGWGVQGLPDFSLGYVNLLQFVFLTITSIIVSGYAANLSKKIN 245

Query: 260 KKYL 263
              L
Sbjct: 246 PTKL 249


>gi|209364180|ref|YP_001425132.2| hypothetical membrane spanning protein [Coxiella burnetii Dugway
           5J108-111]
 gi|207082113|gb|ABS77056.2| hypothetical membrane spanning protein [Coxiella burnetii Dugway
           5J108-111]
          Length = 274

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 123/269 (45%), Gaps = 12/269 (4%)

Query: 11  MVFLSKDCV-VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           M  ++++C+ ++ + L  +A  L   L G+ G+G  ++++P+L+      GI  ++ +H 
Sbjct: 1   MYSVAQECIMLNLLILCSIAGGLGALLQGMVGIGTSIILIPLLTLLLPHYGIPSNVAIHT 60

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T++  +  +S  + ++H +HG I   + K  I          +L+ S +   +L   
Sbjct: 61  ALATTMAAVVVSSTSALVKHHKHGNIQWPLFKKIIGFSVGGAFAGALIASFIPGRYLEYV 120

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNY---VKYIWGMVTGFLSGALGVGGGIFTNLLML 186
           F IF LL+   ML +     + K        +    G+  GF++  LG GG +F    M+
Sbjct: 121 FGIFMLLLAPYMLFKKPSNNQTKIESRLRLPILATGGLGIGFMASLLGAGGSVF----MI 176

Query: 187 FYGASIYKATATSAGVSALIAFP----ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            +  ++      + G S LI  P      +  I++G        +++G++N    L I  
Sbjct: 177 PFLNALKINMRYAVGTSTLIGLPVATIGTITYIFTGLAQMPHSSFTIGYLNWPIFLAISF 236

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIM 271
             IL  P   KL+ ++  K L   F++ M
Sbjct: 237 AGILCAPFGAKLTAILPTKILQRSFAIGM 265


>gi|253995635|ref|YP_003047699.1| hypothetical protein Mmol_0262 [Methylotenera mobilis JLW8]
 gi|253982314|gb|ACT47172.1| protein of unknown function DUF81 [Methylotenera mobilis JLW8]
          Length = 267

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 8/225 (3%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L   F   G+     +H+A+GTSL  +  +S  S   H   GT+  K++ + +  + +
Sbjct: 34  PILVTIFSYQGVGQESVVHLALGTSLACMIISSSSSIYAHASRGTVVWKVVYEMVLGIVL 93

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK----YIWGMV 165
              + + + + V+ +++   FA+F  L+   M     L  + K   N  K    ++ G +
Sbjct: 94  GAFLVTHLAADVNPTYIAIFFALFMALVAGQMF----LNWKPKPSTNPTKLRSLFVAGTL 149

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            G +S    VGGG      + +    I KA  TSA +   IA    +  + SGW      
Sbjct: 150 IGMVSSLAAVGGGFLAVTYLSYKNIDIKKAIGTSAAIGFPIAIAGTVGYMISGWSKTLNE 209

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           P++ GF+ + A L+I   S +  PL    S  + +  L   F+++
Sbjct: 210 PYTFGFIYLPAFLVISIASFIAAPLGASCSNNLPEARLKKIFAIV 254


>gi|268679507|ref|YP_003303938.1| hypothetical protein Sdel_0872 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268617538|gb|ACZ11903.1| protein of unknown function DUF81 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 267

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 11/236 (4%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVPVL+  F   GI     +H+A+GTS+  I  TS  S   H + G +   ++K     
Sbjct: 30  IMVPVLTSIFLAQGIPVEQVVHMALGTSMASIVITSFSSMRAHHQKGAVLWNVVKMMAGG 89

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + + T   + + + +  S L   FA+F   + I M    +    R        +  G   
Sbjct: 90  VVLGTFAATFLAASMKSSHLALFFALFMAYVSIQMALDKKPKPTRSLSTPPYLFGAGSFI 149

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  + +GGG  T   +++    + KA ATSA     I FP L +    G+ +NG+  
Sbjct: 150 GIISALVSIGGGSLTVPYLVWQNVDLKKAIATSAA----IGFP-LSIAGTVGYIVNGMFQ 204

Query: 227 WS------LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            S       GFV + AV++I  +S    PL  K+++ +    L   F++++   SF
Sbjct: 205 GSHGVEMMAGFVYLPAVILISLMSYFTAPLGAKMAHRLPVGKLKKIFALLLMILSF 260


>gi|288559974|ref|YP_003423460.1| hypothetical protein mru_0717 [Methanobrevibacter ruminantium M1]
 gi|288542684|gb|ADC46568.1| hypothetical protein mru_0717 [Methanobrevibacter ruminantium M1]
          Length = 245

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 112/232 (48%), Gaps = 14/232 (6%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWI--- 104
           MVP+    F  +G+D S+ M V++GTSL +I PT+     +H++    N  I++  I   
Sbjct: 1   MVPLQFFLFTSVGVDPSLAMMVSLGTSLAIIIPTASSGAYQHQKK---NKSIVRPGIRLA 57

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM 164
               I      L+ + V    L   FA   + + + ML   R   E+   D     + G 
Sbjct: 58  VFGIIGGFCGGLLANMVPTRILQMIFACLLIFVALDMLFGSRSDGEKALID--FNLLNGG 115

Query: 165 VTGFLSGALGVGGGIFTNL-----LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           + GF  G +    G+   +     L + +G S+ +A  TS+   A  A   L+  IY+G+
Sbjct: 116 IVGFSIGIISGLLGVGGGVFLIPSLCILFGFSLIEAIGTSSVFIAFTAIGGLISYIYTGF 175

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           G+N + P+ LG+V++   ++I+  S+ +  +  KL Y + +K L   F++I+
Sbjct: 176 GVNPM-PYCLGYVSLINFVVIVLFSVPMATIGAKLVYKLPEKRLKQIFAIIL 226


>gi|226330327|ref|ZP_03805845.1| hypothetical protein PROPEN_04241 [Proteus penneri ATCC 35198]
 gi|225201122|gb|EEG83476.1| hypothetical protein PROPEN_04241 [Proteus penneri ATCC 35198]
          Length = 271

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 13/217 (5%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP++        I   + M +A+ TS  VI  ++  S   H +H  I    L     +L 
Sbjct: 30  VPIVMYVVSQQAIPADMVMKIALSTSFSVIIFSTASSAYSHNKHKAI----LWQQFPLLS 85

Query: 109 ITTVVTSLMISHVDKSFLNKAFAI-FCLLM-----GILMLKRDRLYCERKFPDNYVK--- 159
           I T++  L+ + + +   N    I FC+ M     G+L  K++    E        K   
Sbjct: 86  IGTIIGMLVGTFLVQKLSNTLLQIIFCIFMAYTIYGLLTKKKEAERVENAQDPVISKPAL 145

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G + GF+S  +G+ GG  T  L+ ++G +  K  ATS+ +  +IA    ++ I  GW
Sbjct: 146 TTGGSLVGFISSFIGIAGGTITIPLLSYWGFNTRKCIATSSMLGVIIATIGSIMGIVYGW 205

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
               L  + LGF+ + A + I   SIL  P+  K++Y
Sbjct: 206 QQTELANYYLGFIYLPAFIGISITSILTAPIGVKVAY 242


>gi|256810933|ref|YP_003128302.1| protein of unknown function DUF81 [Methanocaldococcus fervens AG86]
 gi|256794133|gb|ACV24802.1| protein of unknown function DUF81 [Methanocaldococcus fervens AG86]
          Length = 261

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 4/165 (2%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L+  F   GI + +    A+GTSL V+   S++S   H +   I+ K       +  I
Sbjct: 34  PILTFIFDYFGIPNGV--KFAVGTSLLVVFINSIISIFRHAKIKNIDWKASIIIGIISLI 91

Query: 110 TTVVTS-LMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI-WGMVTG 167
            + ++  L+++ +D   L K F  F +L  I + K   +    +  DN  K+I  G++TG
Sbjct: 92  FSYISGFLVVNFIDSDVLKKIFGTFLILNAIYLGKSHHIDEIHETEDNLPKFIICGVITG 151

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
           FLSG  G+GGGI    ++  +   + +  A S GV  L +   L+
Sbjct: 152 FLSGLFGIGGGIVVIPILTLFKYPVKRIIAISIGVVPLTSIGGLI 196


>gi|301154749|emb|CBW14212.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 264

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 1/224 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     ++G+ + + M  A+GTS   I  T   S   H + G I  + +K    ++ 
Sbjct: 31  VPTLVYLLPMVGVPEPLLMSTALGTSFATIVITGFSSAQRHHKLGNIVWRAVKVLAPMVM 90

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP-DNYVKYIWGMVTG 167
           I+  ++ L I  +D+    K FA   + +   M+   +    +  P       I G++ G
Sbjct: 91  ISVFISGLFIGKLDRDVSAKIFACLVVYLAAKMVISIKKNTGKTKPLTTQASVIGGILIG 150

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
             S A GVGGG F    +   G  + KA  +SA   AL+    +L  + SGWG   +P +
Sbjct: 151 MASSAAGVGGGGFIVPFLNSRGIDMKKAIGSSAFCGALLGLSGMLSFMVSGWGNPSMPDY 210

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           SLG+V + AVL I   S   + L    +  +    L  GF++++
Sbjct: 211 SLGYVYLPAVLGITGTSFFTSKLGATATSKLPVPTLKKGFALLL 254


>gi|297539002|ref|YP_003674771.1| hypothetical protein M301_1819 [Methylotenera sp. 301]
 gi|297258349|gb|ADI30194.1| protein of unknown function DUF81 [Methylotenera sp. 301]
          Length = 267

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 2/252 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +++I L I      G +SGL GVGGG ++VP+ +  F   G      +H+A+GTSL  + 
Sbjct: 4   IEWIILYIALGSFVGFMSGLLGVGGGGLLVPLFASIFIYQGFSADSVVHLALGTSLACMI 63

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S  S   H   G +   ++K     + +   + + + SHV+ S++   FA+F  L+ +
Sbjct: 64  ISSASSLRAHAYRGAVMWDVVKGMTPGIILGAFIATQIASHVNSSYIAIFFALFMALVAL 123

Query: 140 LMLKRDRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
               + +     K P   +  I  G+  G +S    VGGG  T + + +    I ++  T
Sbjct: 124 QTFIKWQPKPSHK-PRTLLGLIMSGLGIGAISALAAVGGGFLTVVYLGYKNVDIKRSIGT 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           SA +   IA    +  + +GW      P++ GF+ I A L I   S +  P   + S+ +
Sbjct: 183 SAAIGFPIAITGTIGYMINGWAATMDEPYTFGFIYIPAFLAISISSAISAPYGARRSHNM 242

Query: 259 GKKYLTIGFSMI 270
            +  L   F++I
Sbjct: 243 PEANLKKIFAII 254


>gi|212633077|ref|YP_002309602.1| hypothetical protein swp_0172 [Shewanella piezotolerans WP3]
 gi|212554561|gb|ACJ27015.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 269

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 9/216 (4%)

Query: 47  VMVPVLSK---AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDW 103
           V+VPVLS     F+++  +    M  A+ TSL  I  TS  S + H ++G +    L  W
Sbjct: 32  VIVPVLSSILLHFEVLPAEQ--VMIAAIATSLASILFTSTSSAIAHHKNGNVPWN-LTPW 88

Query: 104 IFV-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC--ERKFPDNYVKY 160
           + V + +  +++  M S + +  +   FA+  +L+   ML  ++ +   ERK P   +  
Sbjct: 89  VMVGVALGALISGFMASLLPEKIVRIVFAVSVVLIAFKMLYSNKSHSSTERKMPHKGLLT 148

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
           +   +TG LS  +G+GGG     L+ F+   + KA   ++    +IA    +  I +G  
Sbjct: 149 VLTTITGSLSAMIGIGGGALLVPLLTFFSLDMKKAIGCASACGIVIALFGSIGYISAGSH 208

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           L  L     GFV + A+  I+  S    PL  K ++
Sbjct: 209 LFALADGFAGFVYLPALFGIVCTSWFTAPLGAKSTH 244


>gi|20090528|ref|NP_616603.1| integral membrane protein [Methanosarcina acetivorans C2A]
 gi|19915555|gb|AAM05083.1| integral membrane protein [Methanosarcina acetivorans C2A]
          Length = 272

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 118/231 (51%), Gaps = 12/231 (5%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M PV     Q  G+D  + +  A+GTSL VI   +++  + H+ H      +L     ++
Sbjct: 36  MSPVQYWLLQETGMDPDLALRAALGTSLFVILINAII--VTHKYHK--KQAVLWKPALIM 91

Query: 108 PITTVVTSL----MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG 163
            ++ +++S     + S++  S L+  F +  +L  +       +  + K   N V YI+G
Sbjct: 92  GVSGLISSFGGAAVASYLPASTLSTIFGVVIILGALKTYTTSAVKEKEKIRTNPVFYIFG 151

Query: 164 -MVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
            ++ GF SG LG+GGG+    +ML      + KA  TSA +    +F   +  I +GWG 
Sbjct: 152 GILIGFFSGLLGIGGGVVGIPVMLILLHFDMRKAVGTSAAIMLFTSFGGSVGYIINGWGQ 211

Query: 222 NGLPPWSLGFVN-IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            GLPP+SLG++N +  +L+++P  +L      ++ +++  +YL   F ++M
Sbjct: 212 AGLPPYSLGYINLLNWILLVVP-GLLAARTGAEIGHLVNPEYLKHFFVLLM 261


>gi|91788651|ref|YP_549603.1| hypothetical protein Bpro_2789 [Polaromonas sp. JS666]
 gi|91697876|gb|ABE44705.1| protein of unknown function DUF81 [Polaromonas sp. JS666]
          Length = 266

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 97/225 (43%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVP ++      G      + +A+ TSL  I  TS+ S   H + G +   I++     +
Sbjct: 33  MVPFITLILTSQGYPPEYTVKMAVATSLATICFTSLSSVRAHHQRGAVLWPIVRLLAPGI 92

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            + ++V + +   +    L   FAIF       M    +    R  P     +  G V G
Sbjct: 93  LLGSLVGAQVAVALPGKILGVLFAIFVAFSATQMFLNRKPKPSRTLPGRLGTFSMGWVIG 152

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            LS  +G GG   +   M +    I+ A  TSA +   IA    L  +++G  L  +P  
Sbjct: 153 MLSSLVGAGGAFVSVPFMTWCNVKIHDAVGTSAALGFPIALAGTLGYMWAGQDLPQMPAG 212

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           S+G++ +  +L+I   SI   PL  + ++ +  + L   F+ +++
Sbjct: 213 SVGYLYLPGLLVISLASISTAPLGARTAHRMDIQPLKKVFAGVLY 257


>gi|261402307|ref|YP_003246531.1| protein of unknown function DUF81 [Methanocaldococcus vulcanius M7]
 gi|261369300|gb|ACX72049.1| protein of unknown function DUF81 [Methanocaldococcus vulcanius M7]
          Length = 261

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 117/239 (48%), Gaps = 15/239 (6%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           L G+GGG ++ PVL+  F   GI D I    A+GTSL V+   S++S   H R   IN K
Sbjct: 23  LLGIGGGFLVAPVLTFIFDYFGIPDGIKF--AVGTSLLVVFINSIISIFRHSRIRNINWK 80

Query: 99  ILKDWIFVLPITTVVTS-----LMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
                  ++ +T+++ S     L++  +  + L K F +F ++  I + K   +   ++ 
Sbjct: 81  ----ASLIVGLTSLIFSYLSGMLVVHFIASNILKKIFGVFLIVNSIYLAKSQHIDKIKER 136

Query: 154 PDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            +  V +I+ G+V GFLSG  G+GGGI    L+      I +AT  S     + +   L+
Sbjct: 137 EEKIVHFIFCGVVAGFLSGLFGIGGGIVIIPLLTLIKYPIKRATLISISAVPITSLGGLI 196

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
             + +         +++G+V++   LII    +  + L  K+S +I  K+L    S I+
Sbjct: 197 SYLTAN---TNEYIYNIGYVSVPIALIIAVPILYSSKLGIKISQVIEPKHLRSVLSAIL 252


>gi|261253144|ref|ZP_05945717.1| hypothetical protein VIA_003169 [Vibrio orientalis CIP 102891]
 gi|260936535|gb|EEX92524.1| hypothetical protein VIA_003169 [Vibrio orientalis CIP 102891]
          Length = 269

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 11/233 (4%)

Query: 47  VMVPVLSKA---FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDW 103
           V+VP+LS     F+++  D  +   VA  TSL  I  TS  S + H R+G +  + L  W
Sbjct: 32  VIVPILSVILIYFEVLPSDQVVIAAVA--TSLASILFTSTSSAIAHHRNGNVPWE-LAPW 88

Query: 104 IFV-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML---KRDRLYCERKFPDNYVK 159
           I   + +  +V+  M + + +  +   FAI  +L+ + M    K D+   ERK P+  V 
Sbjct: 89  IMTGVALGALVSGFMAALLPEQVVRLVFAISVVLIALKMFYSSKSDQ-PTERKMPNKGVL 147

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            +   +TG LS  +G+GGG     L+ F+   + KA   ++    +IA    +  I SG 
Sbjct: 148 TVLTTITGGLSAMIGIGGGALLVPLLTFFSIDMKKAIGCASACGIVIALFGSIGYISSGS 207

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
               +     GFV + A+  I+  S    PL  K +  +    +   F+M++ 
Sbjct: 208 AHFSISDGFAGFVYLPALFGIVSTSWFTAPLGAKATNTLPVSTIKKIFAMLLL 260


>gi|150402116|ref|YP_001329410.1| hypothetical protein MmarC7_0189 [Methanococcus maripaludis C7]
 gi|150033146|gb|ABR65259.1| protein of unknown function DUF81 [Methanococcus maripaludis C7]
          Length = 270

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 8/233 (3%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI--NMKILKDW 103
            +MVP L   FQ +GI D   + +A+GTSL VI  TS+ S   H + G I     IL  +
Sbjct: 30  FIMVPTLMYIFQNLGISDDHVVAMAVGTSLSVIFLTSLNSAYSHSKFGNIIWRYSILLGF 89

Query: 104 IFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIW 162
             +L  T V   ++ +++        F +  +++ + M   +     E     NY+  + 
Sbjct: 90  SGILG-TFVGVRIVTNYISGDLHRMLFGVILIILSLNMAFNKTNPQVEINKNVNYLPVVL 148

Query: 163 -GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G + G LS   G+GGG I   +L LF    I ++  TS G+  +I+    L  ++S   
Sbjct: 149 CGFLIGILSSMFGIGGGTIAIPILTLFLKTPIKRSIGTSLGMMVIISLSGFLGYLFSPVE 208

Query: 221 LNGLPPW--SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +     +   +G+V+I A L I  +SI+ +    K+S  I  K L   F +I+
Sbjct: 209 IADTYKYLNFIGYVSISAALSIGAMSIIFSRYGAKISNNINSKLLKKFFGIIL 261


>gi|307945370|ref|ZP_07660706.1| membrane protein [Roseibium sp. TrichSKD4]
 gi|307771243|gb|EFO30468.1| membrane protein [Roseibium sp. TrichSKD4]
          Length = 82

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 38/54 (70%)

Query: 40 FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          FG+GGG V+VPVL +    + +D+S+ MH+++ TSL +I PTS  SF+ H++  
Sbjct: 23 FGIGGGAVLVPVLYQFLTFLQVDESVRMHISVATSLAIIIPTSTRSFLAHKKKA 76


>gi|312136691|ref|YP_004004028.1| hypothetical protein Mfer_0466 [Methanothermus fervidus DSM 2088]
 gi|311224410|gb|ADP77266.1| protein of unknown function DUF81 [Methanothermus fervidus DSM
           2088]
          Length = 269

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 118/239 (49%), Gaps = 17/239 (7%)

Query: 35  TLSGLFGVGGGLVMVPV---LSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           TL+G+ GVGGG ++VP+   L++ F  +G+++S    +A  TSL    P  V ++ EH +
Sbjct: 21  TLTGMLGVGGGFILVPIFFFLNQIF--LGVNESFAFRMATATSLSTFIPNMVSAY-EHAQ 77

Query: 92  HGTINMK--ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR---DR 146
            G++  K   L  +   +      T  +I  V   FL   FA+  + + I +++      
Sbjct: 78  RGSVLWKEGTLIAFFGFIGGIIGATINLILPVK--FLKIFFALLLVFLAIKLIRNVNPKT 135

Query: 147 LYCERKFPDNYVKYIW--GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
           L  ++    N + Y+   G++TG LSG  G+GGGI    L+   G  + K+  TS  V  
Sbjct: 136 LTFQKNVFLNNISYLIPIGILTGILSGMFGIGGGIILVPLLTIIGFDLLKSIGTSTFVVT 195

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           + +   +L+ I+S    N    +S+G+VN+   LII    +L      K++Y   KK L
Sbjct: 196 ITSLGGILIYIFSTNAQN--LSYSIGYVNLLQSLIINITGVLSVRFGVKMAYKYPKKVL 252


>gi|239994353|ref|ZP_04714877.1| hypothetical protein AmacA2_07691 [Alteromonas macleodii ATCC
           27126]
          Length = 123

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 4/114 (3%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A  TSL  I PTSV S   H   G ++  +LK W   + I  +  S  ++ V+ +FL   
Sbjct: 1   ATATSLATIVPTSVSSIRAHHSKGNVDFALLKAWAVFILIGVLAGSYAVTAVNPTFLTLL 60

Query: 130 FAIFCLLMGILML--KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
           F I   L  I ML  K+D L+  +  P    + I     G  S  +G+GGG  T
Sbjct: 61  FGIIATLSAINMLIGKKDALF--KGLPGRAGQSIMATCIGLFSSMVGIGGGTLT 112


>gi|160872382|ref|ZP_02062514.1| putative membrane protein [Rickettsiella grylli]
 gi|159121181|gb|EDP46519.1| putative membrane protein [Rickettsiella grylli]
          Length = 262

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 2/226 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L   F    I  S+ MH+A  T+L  I  T++++    +R  +IN  + +  +  + 
Sbjct: 28  VPGLLAIFSHTDIPQSLQMHMATSTALTSIIFTALIAVYHQQRSFSINWYLFRQLVPGMT 87

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKYIWGMVT 166
           +  +  +L+   +    L   F++F   +   +   +  R+  E      + K   G   
Sbjct: 88  VGIITGALLALLLSTKTLKLLFSLFLFSVAFKLYFHRSPRIKKEIIVLTPFKKGYIGFFI 147

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +SG LG+GGG     + L  G S + A ATS+    L+A    +    +GW  + LP 
Sbjct: 148 GIISGMLGLGGGAIAVPVFLRLGLSTHAAIATSSACVLLLAILGAITFTLTGWHASNLPV 207

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
            SLGFV   AV+ I   S+L  P+ TKL   +    L   F++ +F
Sbjct: 208 GSLGFVYWPAVVGISIGSVLFVPIGTKLGKRVAGNILRRFFALFLF 253


>gi|227355684|ref|ZP_03840077.1| protein of hypothetical function DUF81 [Proteus mirabilis ATCC
           29906]
 gi|227164003|gb|EEI48900.1| protein of hypothetical function DUF81 [Proteus mirabilis ATCC
           29906]
          Length = 271

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 15/218 (6%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP++        I   + M +A+ TS  VI  ++  S   H +H  I    L     +L 
Sbjct: 30  VPIVMYVVSQQAIPADMVMKIALSTSFSVIIFSTASSAYSHNKHKAI----LWSQFPLLA 85

Query: 109 ITTVVTSLMISHVDKSFLNKAFAI-FCLLM-----GILMLKRDRLYCERKFPDNYVKY-- 160
           + T++  L+ + + +   N    I FC+ M     G+L  K++    E    D  V    
Sbjct: 86  VGTLLGMLVGTFLVQKLSNTLLQIIFCIFMAYTIYGLLTKKKEAERVENA-QDPVVSKPA 144

Query: 161 --IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
               G + GF+S  +G+ GG  T  L+  +G +  K  ATS+ +  +IA    ++ I  G
Sbjct: 145 LTTGGSLVGFISSFIGIAGGTITIPLLSHWGFNTRKCIATSSMLGVIIATIGTVMGIVYG 204

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           W    L  + LGFV + A + I   SIL  P+  K++Y
Sbjct: 205 WQQTELADYYLGFVYLPAFIGISITSILTAPIGVKVAY 242


>gi|197285255|ref|YP_002151127.1| hypothetical protein PMI1396 [Proteus mirabilis HI4320]
 gi|194682742|emb|CAR42950.1| putative membrane protein [Proteus mirabilis HI4320]
          Length = 271

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 15/218 (6%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP++        I   + M +A+ TS  VI  ++  S   H +H  I    L     +L 
Sbjct: 30  VPIVMYVVSQQAIPADMVMKIALSTSFSVIIFSTASSAYSHNKHKAI----LWSQFPLLA 85

Query: 109 ITTVVTSLMISHVDKSFLNKAFAI-FCLLM-----GILMLKRDRLYCERKFPDNYVKY-- 160
           + T++  L+ + + +   N    I FC+ M     G+L  K++    E    D  V    
Sbjct: 86  VGTLLGMLVGTFLVQKLSNTLLQIIFCIFMAYTIYGLLTKKKEAERVENA-QDPVVSKPA 144

Query: 161 --IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
               G + GF+S  +G+ GG  T  L+  +G +  K  ATS+ +  +IA    ++ I  G
Sbjct: 145 LTTGGSLVGFISSFIGIAGGTITIPLLSHWGFNTRKCIATSSMLGVIIATIGTVMGIVYG 204

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           W    L  + LGFV + A + I   SIL  P+  K++Y
Sbjct: 205 WQQTELADYYLGFVYLPAFIGISITSILTAPIGVKVAY 242


>gi|88860323|ref|ZP_01134961.1| hypothetical protein PTD2_14902 [Pseudoalteromonas tunicata D2]
 gi|88817521|gb|EAR27338.1| hypothetical protein PTD2_14902 [Pseudoalteromonas tunicata D2]
          Length = 269

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 112/235 (47%), Gaps = 9/235 (3%)

Query: 47  VMVPVLSK---AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDW 103
           V+VP+LS     F+++  +  +    A+ TS+  I  TS  S + H ++G +   I   W
Sbjct: 32  VIVPILSAILLHFEVLAAEQVVV--AAIATSMASILFTSTSSAIAHHKNGNVPWGI-APW 88

Query: 104 IFV-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKY 160
           I + + +  +++  + + + +  +   FA+  +L+ + ML   ++    ERK P+  V  
Sbjct: 89  IMMGVALGALISGFLAALLPEHVVRIVFAVSVVLIALKMLLSSKNDAPVERKLPNKGVLT 148

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
           ++  +TG LS  +G+GGG     L+ F+   + KA   ++    +IA    +  I SG  
Sbjct: 149 VFTTLTGGLSAMIGIGGGALLVPLLTFFSLDMKKAIGCASACGIVIALFGSIGYISSGSA 208

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
              L     GFV + A+  I+  S    PL  K ++ +    +   F++++F  +
Sbjct: 209 YFALKDGFAGFVYLPALFGIVCTSWFTAPLGAKATHYLPVSTIKKIFAVLLFVVA 263


>gi|325577726|ref|ZP_08148001.1| permease [Haemophilus parainfluenzae ATCC 33392]
 gi|325160471|gb|EGC72597.1| permease [Haemophilus parainfluenzae ATCC 33392]
          Length = 264

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 1/224 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     ++G+ + + M  A+GTS   I  T   S   H + G I    +K    ++ 
Sbjct: 31  VPTLVYLLPMVGVPEPLLMSTALGTSFATIVITGFSSAQRHHKLGNIVWSAVKVLAPMIM 90

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP-DNYVKYIWGMVTG 167
           I+  ++ L I  +D+    K FA   + +   M+   +    +  P       I G++ G
Sbjct: 91  ISVFISGLFIGKLDRDVSAKIFACLVVYLAAKMVISIKKSTGKTKPLTTQASVIGGILIG 150

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
             S A GVGGG F    +   G  + K+  +SA   AL+    +L  + SGWG   +P +
Sbjct: 151 MASSAAGVGGGGFIVPFLNSRGIDMKKSIGSSAFCGALLGLSGMLSFMVSGWGNPSMPDY 210

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           SLG+V + AVL I   S   + L    +  +    L  GF++++
Sbjct: 211 SLGYVYLPAVLGITGTSFFTSKLGATATSKLPVPTLKKGFALLL 254


>gi|260778404|ref|ZP_05887296.1| hypothetical protein VIC_003805 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260604568|gb|EEX30863.1| hypothetical protein VIC_003805 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 269

 Score = 58.9 bits (141), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 5/214 (2%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVA-MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           V+VP+LS      G+  S  + +A + TSL  I  TS  S + H ++G +    L  WI 
Sbjct: 32  VIVPILSIILLHFGVLPSEQVVIAAIATSLASILFTSTSSAIAHHKNGNVPWN-LAPWIM 90

Query: 106 V-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKYIW 162
             + +  +++  M + + +  +   FA+  +L+ + M+   ++    +RK P      + 
Sbjct: 91  TGVALGALISGFMAALLPEQVVRAVFAVSVILIALKMIFSSKNDSENDRKMPSKPFLTVL 150

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
             +TG LS  +G+GGG     L+ F+   + KA   ++    +IA    +  I SG G  
Sbjct: 151 TTITGGLSAMIGIGGGALLVPLLTFFSVDMKKAIGCASACGIVIALFGSIGYISSGSGHY 210

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            L     GFV + A+L I+  S    PL  K ++
Sbjct: 211 ALSDGFAGFVYLPALLGIVSTSWFTAPLGAKATH 244


>gi|126640851|ref|YP_001083835.1| hypothetical protein A1S_0795 [Acinetobacter baumannii ATCC 17978]
          Length = 221

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 96/207 (46%), Gaps = 2/207 (0%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           MH+A+GTSL  I  TS  S   H + G +   + ++    L I + + + +   +    L
Sbjct: 1   MHIAVGTSLATIIVTSFSSVSAHHKKGAVLWPVFRNLAPGLVIGSFLGAGIADLLSGQHL 60

Query: 127 NKAFAIFCLLMGILMLKRDRLYCE--RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
                +F ++M   M K   +  +  R+ P   ++++ G   G  S   G+GGG  T   
Sbjct: 61  QLLIGVFAVVMAYRMFKGAHVVVDPTRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPY 120

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +  +G  + KA ATSA     IA    +  ++ G   +   P ++G+++I A + I  +S
Sbjct: 121 LNRHGVVMQKAVATSAACGLPIAIAGAIGFMWFGAKEHISVPNTIGYIHIYAFIGISVMS 180

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIM 271
            +   L  K+++ +  + L   F+ ++
Sbjct: 181 FVTAKLGAKVAHALSPQMLKKCFACLL 207


>gi|315281248|ref|ZP_07869919.1| integral membrane protein, putative [Listeria marthii FSL S4-120]
 gi|313615105|gb|EFR88579.1| integral membrane protein, putative [Listeria marthii FSL S4-120]
          Length = 246

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 124/240 (51%), Gaps = 34/240 (14%)

Query: 41  GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA-PTSVMSFMEHRRHGTINMKI 99
           G+GGG++++P+L     LMG+        A  ++L V        S    R+ G + + +
Sbjct: 21  GIGGGVILLPIL----LLMGVSQGTA---AFSSALTVFTMAIFTCSIYYKRKQGNVGLAL 73

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAF-----AIFCLLMGILMLKRDRLYCERKFP 154
                  + +T++ T+ + + V++     A+     A+  +L+G+++ K+ R   +  F 
Sbjct: 74  ------KIAVTSIPTTFLGAMVNQMLPEAAYRFLYGALIVVLLGVMIWKKKRHNEKPHFL 127

Query: 155 DNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
             Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +   A+ATS+ V+ L +  ++
Sbjct: 128 SEYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQKTASATSSYVTLLTSLASI 187

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
                  + L G   +S+G       + ++P +I+   + T+L+ ++ +K++ I F++++
Sbjct: 188 -----GSYALIGGSDFSIG-------IYMIPGAIIGALIGTRLNKLLDEKWIAILFNILL 235


>gi|172039707|ref|YP_001799421.1| hypothetical protein cur_0027 [Corynebacterium urealyticum DSM
           7109]
 gi|171851011|emb|CAQ03987.1| hypothetical protein cu0027 [Corynebacterium urealyticum DSM 7109]
          Length = 303

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 68/124 (54%), Gaps = 7/124 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I++A+   G +SGL G GGG ++VP L+    L+G      M  A+GTSL V+A  S   
Sbjct: 187 IVLAALGIGVISGLVGAGGGFLVVPALA---LLVGF----TMPAAVGTSLLVVAMQSASG 239

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           F+ H  H  ++ + L     +    T++ +L+ SH+  + L +AF +F LLM  ++L ++
Sbjct: 240 FLSHILHVDVDWQALGSLTGLAMAGTILGTLLGSHIPAAKLKRAFGVFVLLMAAVVLAQE 299

Query: 146 RLYC 149
            L  
Sbjct: 300 YLLA 303


>gi|188025747|ref|ZP_02959652.2| hypothetical protein PROSTU_01536 [Providencia stuartii ATCC 25827]
 gi|188020324|gb|EDU58364.1| hypothetical protein PROSTU_01536 [Providencia stuartii ATCC 25827]
          Length = 277

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 10/177 (5%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSLGVIAPTSVMSF 86
           F+SG  + LFG GGG + VP+L     L+   +S    + M +A+ TS  V+  ++ +S 
Sbjct: 16  FISGITTALFGFGGGFITVPLLYALITLVWGPESEASAVAMQIAVATSTCVMIFSASLSS 75

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD- 145
             H R G +N  I++ +I  + +  ++ + +   VD  ++   F  + ++  +  L R  
Sbjct: 76  RAHYRKGHLNWSIIRPFIIPISLGGILGAFIALSVDSEWIRWLFIGYLVITILDCLIRPG 135

Query: 146 --RLYCERKFPDN---YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             + + E   P     +     G+V G ++  LGVGG + T  LM   GA++ +A A
Sbjct: 136 FMKTHTEGITPSGGGVFADIPIGLVIGAVAAFLGVGGSVMTVPLMRRRGATMIQAAA 192


>gi|90417553|ref|ZP_01225474.1| hypothetical protein GB2207_07766 [marine gamma proteobacterium
           HTCC2207]
 gi|90330645|gb|EAS45935.1| hypothetical protein GB2207_07766 [marine gamma proteobacterium
           HTCC2207]
          Length = 265

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 2/227 (0%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +V+VP+L  AF+  G+   I  HVA+GTSL  I  TS+ S   H +   I   +++    
Sbjct: 26  VVIVPILILAFEFQGMAPEISTHVAIGTSLATILVTSLSSIYTHHQKAAIRWDLVRVITP 85

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
            + +  ++  L+   +  S L   F  F +++ + ML       E   P   +  + G  
Sbjct: 86  GILLGALLGGLVALSLRGSLLQLLFGAFLVIVALQMLFYKPATSEGSSPKPLLLGVAGTA 145

Query: 166 TGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            G LS   G+GGG + T  L  F G  ++ A  ++A     IA  A +V          L
Sbjct: 146 IGGLSTLFGIGGGSLTTPFLT-FSGIKVHHAVGSAAACGFPIALAATVVYASVAIPSVHL 204

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           P  +LG++ I A L I+  S     L   L++ I    L   F +++
Sbjct: 205 PAATLGYIFIPAWLGIVVTSTPCARLGALLAHRIDATLLQRLFGILL 251


>gi|212636536|ref|YP_002313061.1| hypothetical protein swp_3794 [Shewanella piezotolerans WP3]
 gi|212558020|gb|ACJ30474.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 266

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 115/235 (48%), Gaps = 2/235 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           VV  ICL + A  + G ++GL G+GGGL+ VP L      +GI      HVA+ TSL  I
Sbjct: 6   VVFSICLALGA--VIGFMAGLLGIGGGLIAVPALLHILPGVGIPAEHLPHVAIATSLAAI 63

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS+ S   H +   I  ++ +  +    +  + +  +   ++ SFL + FAIF +LM 
Sbjct: 64  ILTSLSSARAHHKRENIPWELFRSMMPGFVLGAICSGFISELIEASFLQQIFAIFVILMA 123

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           I M    R    R  P     +   ++   ++G +G+GGG+     + + G  +  A   
Sbjct: 124 IQMAFPFRPNSNRSMPSTVSLFFAAVIIAIIAGMMGIGGGVLLIPFLTWCGLQMRYAIGF 183

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           S+    LIA    +    +GW ++ LP  ++GF+ + A++ I   SILI PL  K
Sbjct: 184 SSATGLLIALFGSIGYTLAGWNVDTLPEGTIGFIYLPALVGIATTSILIAPLGAK 238


>gi|160898228|ref|YP_001563810.1| hypothetical protein Daci_2787 [Delftia acidovorans SPH-1]
 gi|160363812|gb|ABX35425.1| protein of unknown function DUF81 [Delftia acidovorans SPH-1]
          Length = 272

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 2/225 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+      G+   + + +A+ T++  I  TS+ S   H   G +   I++     +  
Sbjct: 33  PFLTYFLDKRGVGPDLSVKMAIATAMATIVFTSISSLRAHHGRGAVRWDIVRSLAPGIIT 92

Query: 110 TTVVTSLMI-SHVDKSFLNKAFAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTG 167
             ++ SL + + +   +L   F +F   M + ML+ + +    R  P     Y  G   G
Sbjct: 93  GGLLASLGVFALLRGKYLALFFGVFIGYMALRMLRSNSQPTATRALPGPLGLYGAGTGLG 152

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           F+SG +G GG   +   M+     ++ A  TSA +   IA       I++G G  G P +
Sbjct: 153 FISGLVGAGGAFISVPFMMRCSVPMHMAVGTSAALGFPIAVVNAAGLIFTGAGDAGRPEY 212

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           SLG++ + A+L +   S+L  PL  + ++ +    L   F+ ++F
Sbjct: 213 SLGYLWLPALLALACCSVLTAPLGARAAHRLPVGQLKRIFATLLF 257


>gi|148361182|ref|YP_001252389.1| permease [Legionella pneumophila str. Corby]
 gi|296108517|ref|YP_003620218.1| hypothetical protein lpa_04172 [Legionella pneumophila 2300/99
           Alcoy]
 gi|148282955|gb|ABQ57043.1| permease [Legionella pneumophila str. Corby]
 gi|295650419|gb|ADG26266.1| Hypothetical protein lpa_04172 [Legionella pneumophila 2300/99
           Alcoy]
          Length = 268

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 134/264 (50%), Gaps = 4/264 (1%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG-IDDSICMHVAMG 72
           +S + +++ +  II+ +F +G ++G  GVGGGL++VP L   FQ    I + I MHVA G
Sbjct: 2   ISGELLINGVIYIIIGAF-AGIMAGALGVGGGLIVVPGLVYIFQHSQVIPEDILMHVAAG 60

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            SL V+  TS  S   H +   I + + K     L + T++ S+M S +    L   F +
Sbjct: 61  CSLAVMIFTSYASLKAHNKMDEILLPLFKKLCPGLVLGTILGSIMASFIPTHLLKIIFGL 120

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           F L + + ML   R+    KFP  ++  +     G +SG LGVGGG+     + + G  +
Sbjct: 121 FLLGVAMKMLLDVRVSHTDKFPGYWLNTLVSSSIGSISGLLGVGGGVIIIPYLTYCGVPV 180

Query: 193 YKATATSA-GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
            K  A S  G  A+     ++  I     +  +  +S+G++   AVL +   S LI P  
Sbjct: 181 RKIAAVSNLGTFAVGLVGTIMFMITGTLDMTKI-SYSIGYIYWPAVLGVAIPSSLIAPFG 239

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTS 275
            KL+Y++   YL  GF +I+ TT+
Sbjct: 240 AKLNYLLPVNYLRYGFIVILITTA 263


>gi|86145862|ref|ZP_01064190.1| putative membrane protein [Vibrio sp. MED222]
 gi|85836317|gb|EAQ54447.1| putative membrane protein [Vibrio sp. MED222]
          Length = 269

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 9/211 (4%)

Query: 49  VPVLSK---AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           VPVLS      +++  D  +    A+ TSL  I  TS  S + H ++G +    L  WI 
Sbjct: 34  VPVLSSILLHLEVLPADQVVV--AAIATSLASILFTSTSSALAHHKNGNVPWD-LAPWIM 90

Query: 106 V-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKYIW 162
           + + +  +++  M + + +  +   FA+  +L+ I M    ++    ERK P+  V  + 
Sbjct: 91  LGVALGALISGFMAALLPEKVVRIVFAVSVVLIAIKMFLSSKNDAPKERKLPNKGVLTVL 150

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
             +TG LS  +G+GGG     L+ F+   + KA   ++    +IA    +  I SG    
Sbjct: 151 TTITGGLSAMIGIGGGALLVPLLTFFSVDMKKAIGCASACGIVIALFGSIGYITSGSSHF 210

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATK 253
            L     GFV + A+L I+  S    PL  K
Sbjct: 211 ALTEGFAGFVYLPALLGIVCTSWFTAPLGAK 241


>gi|56459616|ref|YP_154897.1| permease [Idiomarina loihiensis L2TR]
 gi|56178626|gb|AAV81348.1| Predicted permease [Idiomarina loihiensis L2TR]
          Length = 263

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 11/235 (4%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDW-IFVLP 108
           P+L     ++G+   + +  A+ TSL  I  T+  +   H +HG +     K W I VLP
Sbjct: 33  PLLIYLLPIIGVPPELVVPSAIATSLATICMTTASASRAHAKHGLME----KFWLIRVLP 88

Query: 109 ---ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
              +  +  + +++ VD  +L   F+I  + +   M+   +           +  +   +
Sbjct: 89  GLSVGAMTGAFLVTVVDPDWLKIIFSIVLIALAARMVLPQKTGEPLTSVSKRLVALGSYI 148

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            G +SG +G+GGG  T   +      + +A A S+  S +I   ++++ I +GW L+G  
Sbjct: 149 IGTISGLVGIGGGALTVPFLSRMRLPVRQAIAISSLGSFVIGCSSVVMFILNGW-LSGRE 207

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS--MIMFTTSFVF 278
             +LG +N+ A L I   S+L  PL  KL++ +  K L   F+  +I+     +F
Sbjct: 208 TGALGLINVPAWLGISVASVLFAPLGAKLAHKLPVKQLQRVFAAFLILVAIQLIF 262


>gi|312884278|ref|ZP_07743987.1| hypothetical protein VIBC2010_10911 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368051|gb|EFP95594.1| hypothetical protein VIBC2010_10911 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 269

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 10/231 (4%)

Query: 49  VPVLSK---AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           VPVLS     F ++  + +I   +A  TSL  I  TS  S + H ++G +    L  W+ 
Sbjct: 34  VPVLSAILIHFNILPSEQTIIAAIA--TSLASILFTSTSSAIAHNKNGNVPWA-LAPWVM 90

Query: 106 V-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML---KRDRLYCERKFPDNYVKYI 161
             + +  +++  + S + +  +   FA+  +L+ I ML    R+    +R  P+  +   
Sbjct: 91  TGVALGALLSGFIASLLPEQIVRSVFAVCVVLIAIKMLYSSTRNEKNTQRALPNKGLLTF 150

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
           +  +TG LS  +G+GGG     L+ F+   + KA   ++    +IA    +  I SG   
Sbjct: 151 FTTITGALSAMIGIGGGALLVPLLTFFSIDMKKAIGCASACGIVIALFGSIGYISSGIEQ 210

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             L     GFV + A+  I+  S    PL  K +  +    +   F+ ++F
Sbjct: 211 FSLKDGFAGFVYLPALFGIICTSWFTAPLGAKATQTLPVASIKKAFAGLLF 261


>gi|217965284|ref|YP_002350962.1| domain of unknown function [Listeria monocytogenes HCC23]
 gi|290892820|ref|ZP_06555811.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|217334554|gb|ACK40348.1| domain of unknown function, putative [Listeria monocytogenes HCC23]
 gi|290557632|gb|EFD91155.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|307570160|emb|CAR83339.1| conserved hypothetical protein [Listeria monocytogenes L99]
          Length = 246

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 134/261 (51%), Gaps = 37/261 (14%)

Query: 21  DYICLIIVASFLSGTLSGLF-GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           D I   ++A  LS ++ G F G+GGG++++P+L     LMG+        A  ++L V  
Sbjct: 2   DMITYFLIA--LSTSVVGSFLGIGGGVILLPIL----LLMGVSQGTA---AFSSALTVFT 52

Query: 80  -PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF-----AIF 133
                 S    R+ G + + +       + +T++ T+ + + V++      +     A+ 
Sbjct: 53  MAIFTCSIYYKRKQGNVGLAL------KIAVTSIPTTFLGAMVNQMLPEAVYRFLYGALI 106

Query: 134 CLLMGILMLKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGA 190
            +L+GI++ K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  
Sbjct: 107 VVLLGIMIWKKKRHNEKPHFLSEYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFML 166

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           +   A+ATS+ V+ L +  ++       + + G   +S+G       + ++P +I+   +
Sbjct: 167 NQKTASATSSYVTLLTSLASI-----GSYAIIGGSDFSIG-------IYMIPGAIIGALI 214

Query: 251 ATKLSYMIGKKYLTIGFSMIM 271
            T+L+ ++ +K++ I F++++
Sbjct: 215 GTRLNKLLDEKWIAILFNVLL 235


>gi|46906866|ref|YP_013255.1| hypothetical protein LMOf2365_0650 [Listeria monocytogenes serotype
           4b str. F2365]
 gi|47091582|ref|ZP_00229378.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858]
 gi|226223250|ref|YP_002757357.1| hypothetical protein Lm4b_00647 [Listeria monocytogenes Clip81459]
 gi|254824106|ref|ZP_05229107.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|254853181|ref|ZP_05242529.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|254932104|ref|ZP_05265463.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|255521133|ref|ZP_05388370.1| hypothetical protein LmonocFSL_07891 [Listeria monocytogenes FSL
           J1-175]
 gi|300764423|ref|ZP_07074416.1| hypothetical protein LMHG_10294 [Listeria monocytogenes FSL N1-017]
 gi|46880132|gb|AAT03432.1| putative membrane protein [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47019901|gb|EAL10638.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858]
 gi|225875712|emb|CAS04415.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258606534|gb|EEW19142.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|293583660|gb|EFF95692.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|293593338|gb|EFG01099.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|300514777|gb|EFK41831.1| hypothetical protein LMHG_10294 [Listeria monocytogenes FSL N1-017]
 gi|328467449|gb|EGF38525.1| hypothetical protein LM1816_10167 [Listeria monocytogenes 1816]
 gi|332311041|gb|EGJ24136.1| Membrane protein [Listeria monocytogenes str. Scott A]
          Length = 246

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 134/261 (51%), Gaps = 37/261 (14%)

Query: 21  DYICLIIVASFLSGTLSGLF-GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           D I   ++A  LS ++ G F G+GGG++++P+L     LMG+        A  ++L V  
Sbjct: 2   DIITYFLIA--LSTSVVGSFLGIGGGVILLPIL----LLMGVSQGTA---AFSSALTVFT 52

Query: 80  -PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF-----AIF 133
                 S    R+ G + + +       + +T++ T+ + + V++      +     A+ 
Sbjct: 53  MAIFTCSIYYKRKQGNVGLAL------KIAVTSIPTTFLGAMVNQMLPEAVYRFLYGALI 106

Query: 134 CLLMGILMLKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGA 190
            +L+GI++ K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  
Sbjct: 107 VVLLGIMIWKKKRHNEKPHFLSEYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFML 166

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           +   A+ATS+ V+ L +  ++       + + G   +S+G       + ++P +I+   +
Sbjct: 167 NQKTASATSSYVTLLTSLASI-----GSYAIIGGSDFSIG-------IYMIPGAIIGALI 214

Query: 251 ATKLSYMIGKKYLTIGFSMIM 271
            T+L+ ++ +K++ I F++++
Sbjct: 215 GTRLNKLLDEKWIAILFNVLL 235


>gi|313610283|gb|EFR85539.1| integral membrane protein, putative [Listeria monocytogenes FSL
           F2-208]
          Length = 244

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 134/261 (51%), Gaps = 37/261 (14%)

Query: 21  DYICLIIVASFLSGTLSGLF-GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           D I   ++A  LS ++ G F G+GGG++++P+L     LMG+        A  ++L V  
Sbjct: 2   DMITYFLIA--LSTSVVGSFLGIGGGVILLPIL----LLMGVSQGTA---AFSSALTVFT 52

Query: 80  -PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF-----AIF 133
                 S    R+ G + + +       + +T++ T+ + + V++      +     A+ 
Sbjct: 53  MAIFTCSIYYKRKQGNVGLAL------KIAVTSIPTTFLGAMVNQMLPEAVYRFLYGALI 106

Query: 134 CLLMGILMLKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGA 190
            +L+GI++ K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  
Sbjct: 107 VVLLGIMIWKKKRHNEKPHFLSEYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFML 166

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           +   A+ATS+ V+ L +  ++       + + G   +S+G       + ++P +I+   +
Sbjct: 167 NQKTASATSSYVTLLTSLASI-----GSYAIIGGSDFSIG-------IYMIPGAIIGALI 214

Query: 251 ATKLSYMIGKKYLTIGFSMIM 271
            T+L+ ++ +K++ I F++++
Sbjct: 215 GTRLNKLLDEKWIAILFNVLL 235


>gi|315122957|ref|YP_004064963.1| hypothetical protein PSM_B0014 [Pseudoalteromonas sp. SM9913]
 gi|315016717|gb|ADT70054.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
          Length = 269

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 5/214 (2%)

Query: 47  VMVPVLSKAF-QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           V+VP+LS        +     + VA+ TSL  I  TS  S + H ++G +   I   W+ 
Sbjct: 32  VIVPILSMILLHFNALPPEQVVVVAIATSLASILFTSTSSAIAHHKNGNVPWNI-APWVM 90

Query: 106 V-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKYIW 162
           V +    +++  M + + +  +   FA+  +L+ + M+   ++     R  P+  +  ++
Sbjct: 91  VGVAFGALISGFMAALLPEHVVRLVFAVSVVLIALKMIFSGKNDSAIARPLPNKGLLSVY 150

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
             +TG LS  +G+GGG     L+ F+   + KA   ++    +IA    L  I SG  L 
Sbjct: 151 TTITGGLSAMIGIGGGAVLVPLLTFFSVDMKKAIGCASASGIVIALFGSLGYISSGSQLF 210

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            L     GFV + A+L I+  S    PL  K ++
Sbjct: 211 SLKQGFAGFVYLPALLGIVCTSWFTAPLGAKATH 244


>gi|254830393|ref|ZP_05235048.1| hypothetical protein Lmon1_03492 [Listeria monocytogenes 10403S]
          Length = 246

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 133/258 (51%), Gaps = 31/258 (12%)

Query: 21  DYICLIIVASFLSGTLSGLF-GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           D I   ++A  LS ++ G F G+GGG++++P+L     LMG+        A  ++L V  
Sbjct: 2   DIITYFLIA--LSTSVVGSFLGIGGGVILLPIL----LLMGVSQGTA---AFSSALTVFT 52

Query: 80  -PTSVMSFMEHRRHGTINMKILKDWIFVLPITTV--VTSLMISHVDKSFLNKAFAIFCLL 136
                 S    R+ G + +  LK  +  +P T +  + + M+      FL  A  +  +L
Sbjct: 53  MAIFTCSIYYKRKQGNVGLA-LKIAVTSIPTTFIGAMVNQMLPEAVYRFLYGA--LIVVL 109

Query: 137 MGILMLKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIY 193
           +GI++ K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +  
Sbjct: 110 LGIMIWKKKRNNEKPHFLSEYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQK 169

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+ATS+ V+ L +  ++       + + G   +S+G       + ++P +I+   + T+
Sbjct: 170 TASATSSYVTLLTSLASI-----GSYAIIGGSDFSIG-------IYMIPGAIIGALIGTR 217

Query: 254 LSYMIGKKYLTIGFSMIM 271
           L+ ++ +K++ I F++++
Sbjct: 218 LNKLLDEKWIAILFNVLL 235


>gi|254428040|ref|ZP_05041747.1| conserved domain protein, putative [Alcanivorax sp. DG881]
 gi|196194209|gb|EDX89168.1| conserved domain protein, putative [Alcanivorax sp. DG881]
          Length = 267

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 96/231 (41%), Gaps = 4/231 (1%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +V+VP L   F  +G  D +   +A+ TSL  I  TS+ +   H + G +   +      
Sbjct: 28  VVIVPALIFLFHGLGFPDELVAKMAVATSLSTIIITSISAVRTHHKAGFVRWPVALRLGV 87

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
            + +     + +   +D   L + F +F +L+ + ML   R   +   P          +
Sbjct: 88  GIVLGAFAGAFIADAMDGELLARLFGLFAMLIALQMLLAGRKALDESLPQRVPGAPGLGL 147

Query: 166 T----GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
                G  S   G+GGG  T   + +    + +A A S+     IA    L    +GW  
Sbjct: 148 AGLLIGTGSAIFGIGGGSLTVPFLSWCRLKMQEAVAISSACGLPIAIAGTLGFAVAGWNE 207

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             LP  +LG+V + A   I+  S     L+ +LS+ +    L   F++++F
Sbjct: 208 QHLPDGALGYVFLPATAGIVLTSFPFARLSARLSHRLPSATLKKVFALVLF 258


>gi|37528316|ref|NP_931661.1| hypothetical protein plu4495 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787754|emb|CAE16867.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 264

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 120/251 (47%), Gaps = 4/251 (1%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LII+++F    LSGLFG G GL+  P +         + S  M  ++ T +  +  + ++
Sbjct: 6   LIIISAFAGSILSGLFGGGAGLIFTPTIYLFLSYANPNSSYIMQTSITTMIASLMISGLV 65

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + ++H ++  I+  +LK    ++ I +++    ++ V    +   F++  L++ I   ++
Sbjct: 66  AIVKHHKYNHIDWNVLKWSAPLIIIGSILGCFTMTVVSSRSVIYVFSLATLILAIRSTQK 125

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY---GASIYKATATSAG 201
                ++   +  + + +  +  FL G +    G   + ++ +Y   G  I K+  T+  
Sbjct: 126 LISNTQQNNTNRDLGWSFRYIGCFLLGLISTLSGA-ASFVVPYYESIGLDIKKSIGTTTV 184

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           V  L +   L+  I  G   N LPP ++GF+N   + + +  +I    L  KL+  + ++
Sbjct: 185 VVWLYSVFVLIFMISLGLNKNNLPPGNIGFLNYNYLWLFIIPTIPGALLGAKLANTLPER 244

Query: 262 YLTIGFSMIMF 272
            L I F+++++
Sbjct: 245 KLRIAFTVLLY 255


>gi|95928914|ref|ZP_01311660.1| protein of unknown function DUF81 [Desulfuromonas acetoxidans DSM
           684]
 gi|95135259|gb|EAT16912.1| protein of unknown function DUF81 [Desulfuromonas acetoxidans DSM
           684]
          Length = 271

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 106/223 (47%), Gaps = 6/223 (2%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M F +   +V +  L I A    G LSGL G+GGG+++VP+    F L+G+   + +H A
Sbjct: 1   MTFWAPQVLVGFAVLGICA----GCLSGLLGIGGGVILVPLFLWCFHLVGVHPDVLVHCA 56

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
             TSL +I PTS+ + + H   G ++   +        +  +V +   S +    L   F
Sbjct: 57  FATSLAIIIPTSISNTLGHNAQGHVDFHQVVFLAVGSALGALVGAWGASMLSGPILRVLF 116

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVK-YIWGMVTGFLSGALGVGGGIFT-NLLMLFY 188
            +  L +   ++       E+   D  +   + G ++G  S   G+GGG+    L++LF 
Sbjct: 117 GVMQLTVAAKLVFGGMSPSEKALIDRPISLLVVGGISGAFSAFFGIGGGVIAVPLMVLFL 176

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF 231
              I+ A   S+ +  + +    L  IY+GW ++ LP  ++GF
Sbjct: 177 SFPIHLAVGNSSALIVVSSLTGTLAYIYNGWQISHLPHGAVGF 219


>gi|299770082|ref|YP_003732108.1| permease [Acinetobacter sp. DR1]
 gi|298700170|gb|ADI90735.1| permease [Acinetobacter sp. DR1]
          Length = 267

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 7/173 (4%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSI---CMHVAMGTSLGVIAPTSVMSFM 87
           LSG  + LFG GGG V VP+L     Q  G + S+    M +A+ TS  V+  ++  +  
Sbjct: 11  LSGVTTWLFGFGGGFVAVPLLYTVIIQKWGNESSVGINAMQIAVATSAFVMLCSASFATF 70

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            H R G I+ + ++     +    VV ++M S  + ++L   F  +  +  +    RD  
Sbjct: 71  RHYRSGQIDWQKIRFLWSGIAFGGVVGAVMASLFNGNWLRWIFMGYVFITILDCYYRDGF 130

Query: 148 YCERKFPDNYVKY---IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
               +   NY +    I G + G+++  LGVGG + T  L+   G+S+ +A A
Sbjct: 131 MVTSRQKQNYSENSELIKGGIIGWVAALLGVGGSVMTVPLLRRRGSSMAEAAA 183


>gi|52843065|ref|YP_096864.1| hypothetical protein lpg2870 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52630176|gb|AAU28917.1| hypothetical protein lpg2870 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 268

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 131/262 (50%), Gaps = 2/262 (0%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG-IDDSICMHVAMG 72
           +S + +++ +  II+ +F +G ++G  GVGGGL++VP L   FQ    I + I MHVA G
Sbjct: 2   ISGELLINGVIYIIIGAF-AGIMAGALGVGGGLIVVPGLVYIFQHSQVIPEDILMHVAAG 60

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            SL V+  TS  S   H +   I + + K     L + T++ S+M S +    L   F +
Sbjct: 61  CSLAVMIFTSYASLKAHNKMDEILLPLFKKLCPGLVLGTILGSIMASFIPTHLLKIIFGL 120

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           F L + + ML   R+    KFP  ++  +     G +SG LGVGGG+     + + G  +
Sbjct: 121 FLLGVAMKMLLDVRVSHTDKFPGYWLNNLVSSSIGSISGLLGVGGGVIIIPYLTYCGVPV 180

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            K  A S   +  +     ++ + +G        +S G++   AVL +   S LI P   
Sbjct: 181 RKIAAVSNLGTFAVGLVGTIMFMITGTLDMAKISYSTGYIYWPAVLGVAIPSSLIAPFGA 240

Query: 253 KLSYMIGKKYLTIGFSMIMFTT 274
           KL+Y++   YL  GF +I+ TT
Sbjct: 241 KLNYLLPVNYLRYGFIVILITT 262


>gi|16802663|ref|NP_464148.1| hypothetical protein lmo0621 [Listeria monocytogenes EGD-e]
 gi|47096284|ref|ZP_00233881.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
 gi|224498700|ref|ZP_03667049.1| hypothetical protein LmonF1_02961 [Listeria monocytogenes Finland
           1988]
 gi|224502079|ref|ZP_03670386.1| hypothetical protein LmonFR_06102 [Listeria monocytogenes FSL
           R2-561]
 gi|254828312|ref|ZP_05232999.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|254900146|ref|ZP_05260070.1| hypothetical protein LmonJ_10045 [Listeria monocytogenes J0161]
 gi|254911300|ref|ZP_05261312.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254935627|ref|ZP_05267324.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|255026854|ref|ZP_05298840.1| hypothetical protein LmonocytFSL_11936 [Listeria monocytogenes FSL
           J2-003]
 gi|16410010|emb|CAC98699.1| lmo0621 [Listeria monocytogenes EGD-e]
 gi|47015329|gb|EAL06265.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
 gi|258600705|gb|EEW14030.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258608208|gb|EEW20816.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|293589231|gb|EFF97565.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 246

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 133/258 (51%), Gaps = 31/258 (12%)

Query: 21  DYICLIIVASFLSGTLSGLF-GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           D I   ++A  LS ++ G F G+GGG++++P+L     LMG+        A  ++L V  
Sbjct: 2   DIITYFLIA--LSTSVVGSFLGIGGGVILLPIL----LLMGVSQGTA---AFSSALTVFT 52

Query: 80  -PTSVMSFMEHRRHGTINMKILKDWIFVLPITTV--VTSLMISHVDKSFLNKAFAIFCLL 136
                 S    R+ G + +  LK  +  +P T +  + + M+      FL  A  +  +L
Sbjct: 53  MAIFTCSIYYKRKQGNVGLA-LKIAVTSIPTTFIGAMVNQMLPEAVYRFLYGA--LIVVL 109

Query: 137 MGILMLKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIY 193
           +GI++ K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +  
Sbjct: 110 LGIMIWKKKRNNEKPHFLSKYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQK 169

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+ATS+ V+ L +  ++       + + G   +S+G       + ++P +I+   + T+
Sbjct: 170 TASATSSYVTLLTSLASI-----GSYAIIGGSDFSIG-------IYMIPGAIIGALIGTR 217

Query: 254 LSYMIGKKYLTIGFSMIM 271
           L+ ++ +K++ I F++++
Sbjct: 218 LNKLLDEKWIAILFNVLL 235


>gi|284800901|ref|YP_003412766.1| hypothetical protein LM5578_0649 [Listeria monocytogenes 08-5578]
 gi|284994087|ref|YP_003415855.1| hypothetical protein LM5923_0648 [Listeria monocytogenes 08-5923]
 gi|284056463|gb|ADB67404.1| hypothetical protein LM5578_0649 [Listeria monocytogenes 08-5578]
 gi|284059554|gb|ADB70493.1| hypothetical protein LM5923_0648 [Listeria monocytogenes 08-5923]
          Length = 246

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 133/258 (51%), Gaps = 31/258 (12%)

Query: 21  DYICLIIVASFLSGTLSGLF-GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           D I   ++A  LS ++ G F G+GGG++++P+L     LMG+        A  ++L V  
Sbjct: 2   DMITYFLIA--LSTSVVGSFLGIGGGVILLPIL----LLMGVSQGTA---AFSSALTVFT 52

Query: 80  -PTSVMSFMEHRRHGTINMKILKDWIFVLPITTV--VTSLMISHVDKSFLNKAFAIFCLL 136
                 S    R+ G + +  LK  +  +P T +  + + M+      FL  A  +  +L
Sbjct: 53  MAIFTCSIYYKRKQGNVGLA-LKIAVTSIPTTFIGAMVNQMLPEAVYRFLYGA--LIVVL 109

Query: 137 MGILMLKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIY 193
           +GI++ K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +  
Sbjct: 110 LGIMIWKKKRNNEKPHFLSKYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQK 169

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+ATS+ V+ L +  ++       + + G   +S+G       + ++P +I+   + T+
Sbjct: 170 TASATSSYVTLLTSLASI-----GSYAIIGGSDFSIG-------IYMIPGAIIGALIGTR 217

Query: 254 LSYMIGKKYLTIGFSMIM 271
           L+ ++ +K++ I F++++
Sbjct: 218 LNKLLDEKWIAILFNVLL 235


>gi|289433897|ref|YP_003463769.1| hypothetical protein lse_0530 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289170141|emb|CBH26681.1| membrane protein, putative [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 246

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 131/258 (50%), Gaps = 31/258 (12%)

Query: 21  DYICLIIVASFLSGTLSGLF-GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           D I   ++A  LS ++ G F G+GGG++++P+L     LMGI        A  ++L V  
Sbjct: 2   DIITYFLIA--LSTSVIGSFLGIGGGVILLPIL----LLMGISQGTA---AFSSALTVFT 52

Query: 80  -PTSVMSFMEHRRHGTINMKILKDWIFVLPITTV--VTSLMISHVDKSFLNKAFAIFCLL 136
                 S    R+ G + +  LK  I  +P T +  + + M+      FL  A  +  +L
Sbjct: 53  MAIFTCSIYYKRKQGNVGLA-LKIAITSIPTTFIGAIVNQMLPEAVYRFLYGALIVVLIL 111

Query: 137 MGILMLKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIY 193
           +  ++ K  R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +  
Sbjct: 112 L--MVWKNKRNNEQPHFLSKYRIMPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQK 169

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+ATS+ V+ L +F ++       + + G   +S+G       + ++P +IL   + T+
Sbjct: 170 TASATSSYVTLLTSFASI-----GSYAIIGGSDFSIG-------IYMIPGAILGAIIGTR 217

Query: 254 LSYMIGKKYLTIGFSMIM 271
           L+ ++ +K++ I F++++
Sbjct: 218 LNKLLDEKWIAILFNILL 235


>gi|54298862|ref|YP_125231.1| hypothetical protein lpp2929 [Legionella pneumophila str. Paris]
 gi|53752647|emb|CAH14082.1| hypothetical protein lpp2929 [Legionella pneumophila str. Paris]
          Length = 268

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 133/264 (50%), Gaps = 4/264 (1%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG-IDDSICMHVAMG 72
           +S + +++ +  II+ +F +G ++G  GVGGGL++VP L   FQ    I + I MHVA G
Sbjct: 2   ISGELLINGVIYIIIGAF-AGIMAGALGVGGGLIVVPGLVYIFQHSQVIPEDILMHVAAG 60

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            SL V+  TS  S   H +   I + + K     L + T++ S+M S +    L   F +
Sbjct: 61  CSLAVMIFTSYASLKAHNKMDEILLPLFKKLCPGLVLGTILGSIMASFIPTHLLKIIFGL 120

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           F L + + ML   R+    KFP  ++  +     G +SG LGVGGG+     + + G  +
Sbjct: 121 FLLGVAMKMLLDIRVSHTDKFPGYWLNTLVSSSIGSISGLLGVGGGVIIIPYLTYCGVPV 180

Query: 193 YKATATSA-GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
            K  A S  G  A+     ++  I     +  +  +S G++   AVL +   S LI P  
Sbjct: 181 RKIAAVSNLGTFAVGLVGTIMFMITGTLDMTKI-SYSTGYIYWPAVLGVAIPSSLIAPFG 239

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTS 275
            KL+Y++   YL  GF +I+ TT+
Sbjct: 240 AKLNYLLPVNYLRYGFIVILITTA 263


>gi|307611743|emb|CBX01448.1| hypothetical protein LPW_31371 [Legionella pneumophila 130b]
          Length = 268

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 132/263 (50%), Gaps = 2/263 (0%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG-IDDSICMHVAMG 72
           +S + +++ +  II+ +F +G ++G  GVGGGL++VP L   FQ    I + I MHVA G
Sbjct: 2   ISGELLINGVIYIIIGAF-AGIMAGALGVGGGLIVVPGLVYIFQHSQVIPEDILMHVAAG 60

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            SL V+  TS  S   H +   I + + K     L + T++ S+M S +    L   F +
Sbjct: 61  CSLAVMIFTSYASLKAHNKMDEILLPLFKKLCPGLVLGTILGSIMASFIPTHLLKIIFGL 120

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           F L + + ML   R+    KFP  ++  +     G +SG LGVGGG+     + + G  +
Sbjct: 121 FLLGVAMKMLLDVRVSHTDKFPGYWLNTLVSSSIGSISGLLGVGGGVIIIPYLTYCGVPV 180

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            K  A S   +  +     ++ + +G        +S G++   AVL +   S LI P   
Sbjct: 181 RKIAAVSNLGTFAVGLVGTIMFMVTGTLDMTKISYSTGYIYWPAVLGVAIPSSLIAPFGA 240

Query: 253 KLSYMIGKKYLTIGFSMIMFTTS 275
           KL+Y++   YL  GF +I+ TT+
Sbjct: 241 KLNYLLPVNYLRYGFIVILITTA 263


>gi|54295695|ref|YP_128110.1| hypothetical protein lpl2783 [Legionella pneumophila str. Lens]
 gi|53755527|emb|CAH17026.1| hypothetical protein lpl2783 [Legionella pneumophila str. Lens]
          Length = 268

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 133/264 (50%), Gaps = 4/264 (1%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG-IDDSICMHVAMG 72
           +S + +++ +  II+ +F +G ++G  GVGGGL++VP L   FQ    I + I MHVA G
Sbjct: 2   ISGELLINGMIYIIIGAF-AGIMAGALGVGGGLIVVPGLVYIFQHSQVIPEDILMHVAAG 60

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            SL V+  TS  S   H +   I + + K     L + T++ S+M S +    L   F +
Sbjct: 61  CSLAVMIFTSYASLKAHNKMDEILLHLFKKLCPGLVLGTILGSIMASFIPTHLLKIIFGL 120

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           F L + + ML   R+    KFP  ++  +     G +SG LGVGGG+     + + G  +
Sbjct: 121 FLLGLAMKMLLDVRVSHTDKFPGYWLNTLVSSSIGSISGLLGVGGGVIIIPYLTYCGVPV 180

Query: 193 YKATATSA-GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
            K  A S  G  A+     ++  I     +  +  +S G++   AVL +   S LI P  
Sbjct: 181 RKIAAVSNLGTFAVGLVGTIMFMITGTLDMTKI-SYSTGYIYWPAVLGVAIPSSLIAPFG 239

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTS 275
            KL+Y++   YL  GF +I+ TT+
Sbjct: 240 AKLNYLLPVNYLRYGFIVILITTA 263


>gi|18977447|ref|NP_578804.1| hypothetical protein PF1075 [Pyrococcus furiosus DSM 3638]
 gi|18893142|gb|AAL81199.1| hypothetical protein PF1075 [Pyrococcus furiosus DSM 3638]
          Length = 219

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 76/140 (54%), Gaps = 6/140 (4%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK--ILKDWIFVLPITTVVTSLMISHVD 122
           + +H A+GTSL  IA +S  S   H + G +++K  ILK+ +F +P   V+ + + + ++
Sbjct: 14  LSIHEAIGTSLACIAISSFSSAYTHLKKGKVHIKVVILKE-LFSIP-AAVLGAYLTNDIN 71

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY-IWGMVTGFLSGALGVGGGIFT 181
           +  L  AF++    + + +  + R    ++   +Y +  + G+ +GFLSG LG+ GGI  
Sbjct: 72  EKILRVAFSMLLFYLAVRLTVKRRAKDSKEAKIHYERVPLVGVASGFLSGLLGISGGILN 131

Query: 182 -NLLMLFYGASIYKATATSA 200
             L  +F G  I  +  TS+
Sbjct: 132 VPLFTIFVGIPIKYSIGTSS 151


>gi|313634576|gb|EFS01059.1| integral membrane protein, putative [Listeria seeligeri FSL N1-067]
 gi|313639169|gb|EFS04118.1| integral membrane protein, putative [Listeria seeligeri FSL S4-171]
          Length = 246

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 131/258 (50%), Gaps = 31/258 (12%)

Query: 21  DYICLIIVASFLSGTLSGLF-GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           D I   ++A  LS ++ G F G+GGG++++P+L     LMGI        A  ++L V  
Sbjct: 2   DIITYFLIA--LSTSVIGSFLGIGGGVILLPIL----LLMGISQGTA---AFSSALTVFT 52

Query: 80  -PTSVMSFMEHRRHGTINMKILKDWIFVLPITTV--VTSLMISHVDKSFLNKAFAIFCLL 136
                 S    R+ G + +  LK  I  +P T +  + + M+      FL  A  +  +L
Sbjct: 53  MAIFTCSIYYKRKQGNVGLA-LKIAITSIPTTFIGAIVNQMLPEAVYRFLYGALIVVLIL 111

Query: 137 MGILMLKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIY 193
           +  ++ K  R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +  
Sbjct: 112 L--MVWKNKRNNEQPHFLSKYRIMPYLFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQK 169

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+ATS+ V+ L +F ++       + + G   +S+G       + ++P +IL   + T+
Sbjct: 170 TASATSSYVTLLTSFASI-----GSYAIIGGSDFSIG-------IYMIPGAILGAIIGTR 217

Query: 254 LSYMIGKKYLTIGFSMIM 271
           L+ ++ +K++ I F++++
Sbjct: 218 LNKLLDEKWIAILFNILL 235


>gi|187251557|ref|YP_001876039.1| putative permease [Elusimicrobium minutum Pei191]
 gi|186971717|gb|ACC98702.1| putative permease [Elusimicrobium minutum Pei191]
          Length = 275

 Score = 55.5 bits (132), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 37/195 (18%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +I L++   F+ G +  +FG+GGG+ +VP+L   F        + +H A+  SL  +  
Sbjct: 2   SHIWLLLPVGFIIGFMGSMFGIGGGIFIVPILHFGF-------GVPLHQAVACSLLTVVA 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +S+MS M   + G IN++I K       +  ++ S +I  +    +   F+I    M   
Sbjct: 55  SSMMSTMAKIQSGVINIRISKSLEIPSILGAIIGSNIIGALPIGVIKVMFSIVAAAMAFN 114

Query: 141 MLKR----------DRLYCERK---FPDNYVKYIWGMV-----------------TGFLS 170
           MLK           +  Y E K   F D+Y     G                    GFLS
Sbjct: 115 MLKNPFKVLTGKKVNEPYYESKECSFADSYRDKATGKTVFYQAKNLKWAVPLSVFAGFLS 174

Query: 171 GALGVGGGIFTNLLM 185
             LGVGGG+    LM
Sbjct: 175 STLGVGGGVINVPLM 189


>gi|261343525|ref|ZP_05971170.1| putative membrane protein [Providencia rustigianii DSM 4541]
 gi|282568674|gb|EFB74209.1| putative membrane protein [Providencia rustigianii DSM 4541]
          Length = 271

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 14/179 (7%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQL-----MGIDDSICMHVAMGTSLGVIAPTSVMS 85
           F+SG  + LFG GGG + VP+L     L     + + D I M +A+ TS  V+  +S +S
Sbjct: 10  FISGITTALFGFGGGFITVPLLYALITLVWGSQLDVRD-IAMQIAVATSTCVMIFSSSVS 68

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL--MLK 143
              H   G ++ K++K +I  + I  V+ +++   VD  ++   F I  L++ IL   ++
Sbjct: 69  SRAHYLKGNLDWKMIKPFILPISIGGVLGAMIALSVDSEWIRWIF-IGYLVVTILDCFIR 127

Query: 144 RDRLYCERKFPD-NYVKYIW----GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
              +  + K  + N   Y+     GM+ G ++  LGVGG + T  LM   GAS+ +A A
Sbjct: 128 PGFMKTQPKGINLNQGSYLAEGTIGMLIGTVAAFLGVGGSVMTVPLMRRRGASMLQAAA 186


>gi|212712467|ref|ZP_03320595.1| hypothetical protein PROVALCAL_03561 [Providencia alcalifaciens DSM
           30120]
 gi|212684924|gb|EEB44452.1| hypothetical protein PROVALCAL_03561 [Providencia alcalifaciens DSM
           30120]
          Length = 271

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 10/177 (5%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLM----GIDDSICMHVAMGTSLGVIAPTSVMSF 86
           F+SG  + LFG GGG + VP+L     L+         + M +A+ TS  V+  +S +S 
Sbjct: 10  FISGITTALFGFGGGFIAVPLLYALITLVWGPRHDTSEVAMQIAVATSTFVMIFSSSLSS 69

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             H   G +N +I++ ++  + I  ++ +L+   VD  ++   F  + ++  +    R  
Sbjct: 70  RAHYLKGNLNWQIIQPFMIPISIGGILGALIALSVDSEWIRWIFIGYLIITILDCFIRPG 129

Query: 147 LYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
               +   +  ++       + G V G ++  LGVGG + T  LM   GAS+ +A A
Sbjct: 130 FLQTQAEGNTLIRGKCVTDAVIGTVIGTVAAFLGVGGSVMTVPLMRRRGASMLQAAA 186


>gi|134045788|ref|YP_001097274.1| hypothetical protein MmarC5_0749 [Methanococcus maripaludis C5]
 gi|132663413|gb|ABO35059.1| protein of unknown function DUF81 [Methanococcus maripaludis C5]
          Length = 270

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 8/233 (3%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK--ILKDW 103
            +MVP L   FQ +GI D   + +A+GTSL VI  TS+ S   H ++G I  K  +L  +
Sbjct: 30  FIMVPTLIYIFQNLGISDDYVVAMAVGTSLSVIFLTSLNSAYSHSKYGNIIWKYSLLLGF 89

Query: 104 IFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIW 162
             +L  T     ++ +++        F I  +++ + M   +     E     NY+  + 
Sbjct: 90  SGILG-TFAGVKIVTNYISGDLHRILFGIMLIILSLNMAFNKTNPKIESNQNVNYLPVLL 148

Query: 163 -GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G + G LS   G+GGG I   +L +F    I K+  TS G+  +I+    L  + S   
Sbjct: 149 CGFLIGVLSSMFGIGGGTIAIPILTIFLKTPIKKSIGTSLGMMVIISLSGFLGYLLSSVE 208

Query: 221 LNGLPPW--SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           + G   +   +G+V++ A L I  +S++ +    K+S  I    L   F +I+
Sbjct: 209 IVGSYKYLNFIGYVSVSAALSIGVMSLIFSRYGAKISNNINSGVLKKFFGIIL 261


>gi|84489169|ref|YP_447401.1| hypothetical protein Msp_0355 [Methanosphaera stadtmanae DSM 3091]
 gi|84372488|gb|ABC56758.1| conserved hypothetical membrane-spanning protein [Methanosphaera
           stadtmanae DSM 3091]
          Length = 268

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 16/225 (7%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+     Q +G++ SI + ++  TSL VI  T +    EH R+G +  + LK  + +  I
Sbjct: 34  PIQYYLLQSIGVNPSIALPMSFATSLAVIFVTMIRGTREHYRNGNVEDRFLKQMMILGFI 93

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
             +  + + +H+D + L+  F + C++  + M+         K+PDN        +   L
Sbjct: 94  GAICGAFISTHIDVTLLSFLFGVLCIVAVLNMIL-------IKYPDNDENISKSKLGHSL 146

Query: 170 SG---------ALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G             GG I    L +      +KA  TS+          L+  I  G  
Sbjct: 147 LGFAAGLLCGLLGVGGGVIMIPALTILLKYPTHKAIGTSSASIIATTLGGLIAYIILGLN 206

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           ++ LP +S+G+VNI   + +   S  +   A  LS  I  + L I
Sbjct: 207 VSNLPQFSIGYVNILQFIFLTITSTFVVKYAADLSVRIDARILKI 251


>gi|89891731|ref|ZP_01203234.1| conserved hypothetical transmembrane protein [Flavobacteria
           bacterium BBFL7]
 gi|89516066|gb|EAS18730.1| conserved hypothetical transmembrane protein [Flavobacteria
           bacterium BBFL7]
          Length = 266

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 15  SKDCVVDY-ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
            ++ V+ Y   LIIV   + GT++G+ G GGG +++P L    +L        M  A+ T
Sbjct: 139 DEESVITYNYLLIIVEGLVVGTITGIVGAGGGFLIIPALVLLAKL-------PMKKAVAT 191

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV-VTSLMI-----SHVDKSFLN 127
           SL +IA  S++ F+   +    N++I  DW F+LP T + +  + +       +D   L 
Sbjct: 192 SLFIIAIKSLIGFLGDVK----NLEI--DWTFLLPFTALSIIGIFLGIWLNKFIDGKKLK 245

Query: 128 KAFAIFCLLMGILMLKRD 145
           KAF  F L+MGI ++ ++
Sbjct: 246 KAFGWFVLVMGIYIIYKE 263


>gi|57640988|ref|YP_183466.1| hypothetical protein TK1053 [Thermococcus kodakarensis KOD1]
 gi|57159312|dbj|BAD85242.1| hypothetical membrane protein, conserved, DUF81 family
           [Thermococcus kodakarensis KOD1]
          Length = 243

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 29/217 (13%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI-LKDWIFVLPITTVVTSLMISHVDK 123
           + +H A+GTSL  I+ +++ S   H R G +  ++ L   +F +P + ++ + + SH+ +
Sbjct: 37  VPIHKAIGTSLACISISALASAYTHLRSGRVLYRVVLLKEMFSIP-SAILGAYLSSHLPE 95

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYC--------ERKFPDNYVKYIWGMVTGFLSGALGV 175
             L   F +  L + + ML+  +  C         R  P      + G+V+G +SG LGV
Sbjct: 96  RLLRVVFGVLLLYLAVAMLRSKKGDCEMEKGKIEYRNVP------LVGLVSGLVSGLLGV 149

Query: 176 GGGIFT-NLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
            GGI    L     G  I  A  TS+         ALL    +G        W LG V  
Sbjct: 150 SGGILNVPLFHTLVGIPIKYAVGTSS--------LALLFTALAGT----FEHWRLGHVQP 197

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
             VL + P  I+   L  K    +  + L  GF+ ++
Sbjct: 198 NIVLFLAPGLIMGARLGAKTVSRVNPRSLRAGFAALL 234


>gi|71282040|ref|YP_267896.1| hypothetical protein CPS_1153 [Colwellia psychrerythraea 34H]
 gi|71147780|gb|AAZ28253.1| putative membrane protein [Colwellia psychrerythraea 34H]
          Length = 269

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 9/216 (4%)

Query: 47  VMVPVLSKA---FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDW 103
           V+VPVLS     F ++  +  +   VA+ TSL  I  TS  S + H ++G +    L  W
Sbjct: 32  VIVPVLSSLLLYFDVLPTEQVVI--VAIATSLASILFTSTSSAIAHHKNGNVPWN-LAPW 88

Query: 104 IFV-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKY 160
           I   + +  +++  + + + +  +   FA+  +L+ + M    +     +R+ P+  +  
Sbjct: 89  IMTGVALGALISGFIAALLPEQVVRIVFAVTVVLIAVKMFYSSKSDAPSKRQLPNKGLLT 148

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            +  +TG LS  +G+GGG     L+ F+   + KA   ++    +IA    +  I SG  
Sbjct: 149 FFTTITGGLSAMIGIGGGALLVPLLTFFSLDMKKAIGCASACGIVIALFGSIGYISSGSA 208

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
              L     GFV + A+L I+  S    PL  K ++
Sbjct: 209 YFALADGFAGFVYLPALLGIVCTSWFTAPLGAKATH 244


>gi|87120732|ref|ZP_01076625.1| hypothetical protein MED121_18365 [Marinomonas sp. MED121]
 gi|86163960|gb|EAQ65232.1| hypothetical protein MED121_18365 [Marinomonas sp. MED121]
          Length = 258

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 22/245 (8%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  +  I ++   +FL+G +  + G GGGLV VPVL       GI+ +    +A     G
Sbjct: 7   DFSLSTILILTFVAFLAGIIDSIAG-GGGLVTVPVL----LFSGIEPA--QALATNKLQG 59

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                S       RR   +++K L   I    I +V+ +++++++D S L KA  I  +L
Sbjct: 60  CAGTVSASYHFIKRRK--VDLKALLPAIITTAIGSVLGTILVAYLDSSLLLKAVPIILIL 117

Query: 137 MGILMLKRDRLY----CERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGAS 191
           + I  L  ++L      + +F       I G   GF  G +G G G  FT   +   G +
Sbjct: 118 VAIFFLFLNKLQPLISSKVQFSSFAFALIIGTSFGFYDGLIGPGTGAFFTTAYLCLTGMN 177

Query: 192 IYKATATSAGVSALIAFPALLVRIYSG---WGLN---GLPPWSLGFVNIGAVLIILPISI 245
           +  ATA +  ++A     +L +  ++G   WGL        W LG   IG+ L++   ++
Sbjct: 178 LISATANTKVLNATSNLASLFIFSFTGHVLWGLGLCMAAGQW-LG-AQIGSRLVVTKGNL 235

Query: 246 LITPL 250
           LI P+
Sbjct: 236 LIRPM 240


>gi|45358505|ref|NP_988062.1| hypothetical protein MMP0942 [Methanococcus maripaludis S2]
 gi|44921263|emb|CAF30498.1| conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 270

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 28/242 (11%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP+L   FQ +GI D   + +A+GTSL VI  TS+ S   H + G I       W + 
Sbjct: 31  LMVPILIYLFQNLGISDDYVVAMAVGTSLSVIFLTSLNSAYSHSKFGNI------IWKYS 84

Query: 107 LPI-------TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYV 158
           L +       T V   ++  ++        F I  +++ + M L +     E      Y+
Sbjct: 85  LLLGFSGIMGTFVGVQIVTKYLSGDLHRMLFGIMLIILSLNMALSKSDPKLENSQEIKYL 144

Query: 159 KYIW-GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
             I+ G + G LS   G+GGG I   +L +F    I K+  TS G+  +I+    L    
Sbjct: 145 PVIFCGFLIGILSSMFGIGGGTIAIPILTIFLKTPIKKSIGTSLGMMVIISLSGSL---- 200

Query: 217 SGWGLNGLP-PWS------LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            G+  N +  P +      +G+V++ +VL I  +SI+ +    KLS  I    L   F +
Sbjct: 201 -GYFTNSVAIPQAYNYLNFIGYVSLTSVLSIGVMSIIFSRYGAKLSNRINAGLLKKFFGI 259

Query: 270 IM 271
           I+
Sbjct: 260 IL 261


>gi|84387028|ref|ZP_00990051.1| putative membrane protein [Vibrio splendidus 12B01]
 gi|84378103|gb|EAP94963.1| putative membrane protein [Vibrio splendidus 12B01]
          Length = 269

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 9/166 (5%)

Query: 49  VPVLSK---AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           VPVLS      +++  D  +    A+ TSL  I  TS  S + H ++G +    L  WI 
Sbjct: 34  VPVLSSILLHLEILPADQVVV--AAIATSLASILFTSTSSALAHHKNGNVPWD-LAPWIM 90

Query: 106 V-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKYIW 162
           + + +  +V+  M + + +  +   FA+  +L+ I M    ++    ERK P+  V  + 
Sbjct: 91  LGVALGALVSGFMAALLPEKVVRIVFAVSVVLIAIKMFLSSKNDAPKERKLPNKGVLTVL 150

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
             +TG LS  +G+GGG     L+ F+   + KA   ++    +IA 
Sbjct: 151 TTITGGLSAMIGIGGGALLVPLLTFFSVDMKKAIGCASACGIVIAL 196


>gi|262274911|ref|ZP_06052722.1| hypothetical protein VHA_001894 [Grimontia hollisae CIP 101886]
 gi|262221474|gb|EEY72788.1| hypothetical protein VHA_001894 [Grimontia hollisae CIP 101886]
          Length = 268

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 13/225 (5%)

Query: 50  PVLSKAFQLMGIDDSICM--HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           P LS      G+ D + M    A+ TSL  I  TS  S   H + G +   +++  +  +
Sbjct: 36  PALSVLLPWAGVSDDLVMPM--ALATSLASIVITSASSAFTHYQLGNVQPSVIRSLLPGI 93

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            +  ++ S +   +   +L K F +  L++ + M    R+   R  P        G + G
Sbjct: 94  LVGGMLGSAIADKMPTQYLPKVFGVIVLILALQMALSLRVRPARSLPSAIGSMTSGTMIG 153

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG---L 224
            ++   G+GGG  T   + ++G  + KA   ++     +A   +   I+  +GLN    L
Sbjct: 154 MIASLAGIGGGSLTVPYLNYHGVEMRKAIGCASLCGVFLALSGVAGFIF--FGLNQPETL 211

Query: 225 PPWSLGFVNIGAVLIILPISILIT----PLATKLSYMIGKKYLTI 265
           P +S+G+V + A++ I+  S++ T     LAT+L   I K+   +
Sbjct: 212 PVYSVGYVYLPALMGIVITSVMTTRYGASLATRLPTPIIKRVFAV 256


>gi|152980923|ref|YP_001354870.1| hypothetical protein mma_3180 [Janthinobacterium sp. Marseille]
 gi|151281000|gb|ABR89410.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 264

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/226 (21%), Positives = 103/226 (45%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
            +VP+++  F          +H+A+GT +  I  TS  S  EH +   ++  I+K     
Sbjct: 28  TLVPIMAALFAAQHFAPDHIVHLALGTCMASIVFTSGSSVREHLKFDGVDFDIVKRMTPG 87

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           L + +++ + + + + +  L  +FA+        ++   +    R  P     +  G++ 
Sbjct: 88  LVVGSLLATSVSAWIPQRHLALSFAVIVFFGATQIILNKKPKPSRPLPSAGPLFFVGLII 147

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G + G +  GG   T   ML+ G  + K   T A +   +A    +  + SGW + GLP 
Sbjct: 148 GIIGGLVSAGGAFLTIPFMLWCGVPMKKTIGTGAMMGIPLAIVGTIGYVISGWSVPGLPD 207

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
            ++GF+++ A+  I+  S+   P   +L++ +    L   F+ +++
Sbjct: 208 DAVGFISVIALAGIVCGSVFTAPFGARLAHRLPVPVLKRIFACLLY 253


>gi|262276011|ref|ZP_06053820.1| hypothetical protein VHA_002994 [Grimontia hollisae CIP 101886]
 gi|262219819|gb|EEY71135.1| hypothetical protein VHA_002994 [Grimontia hollisae CIP 101886]
          Length = 268

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 2/207 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PV +  F   GI +   +H+A+GTS+  +  T+  S   H + G ++  +       + +
Sbjct: 34  PVFTFLFTKQGIGNEDVVHLALGTSMAAMIVTTFGSMRAHLKKGNVDSNMAIKMSGAVLV 93

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW-GMVTGF 168
            T + +   S++  ++L   F++F L +   M  R++ Y     P   V   + G V G 
Sbjct: 94  GTFLATFTASYLQGTYLAGFFSLFMLFVAYKMF-REKEYSFNPHPHGPVANTFAGFVIGS 152

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  + + G   T   +      I +A  TSA +   IA    L  + +GW    L    
Sbjct: 153 VSALVSISGAGLTIPYLAQQNFEIKRAIGTSAAIGFPIALSGSLGYLINGWSNTDLDSMI 212

Query: 229 LGFVNIGAVLIILPISILITPLATKLS 255
           LG++ + A++     S   T +  +L+
Sbjct: 213 LGYIYLPAMVTFSISSYFATRIGVRLA 239


>gi|300778873|ref|ZP_07088731.1| membrane protein [Chryseobacterium gleum ATCC 35910]
 gi|300504383|gb|EFK35523.1| membrane protein [Chryseobacterium gleum ATCC 35910]
          Length = 260

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 19/118 (16%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G L+GL G GGG +++P L    +       I M +A+GTSL +I+  S++ F     H 
Sbjct: 153 GVLTGLVGAGGGFMIIPALVNLLK-------IPMKIAIGTSLVIISLNSLIGFFSSVNH- 204

Query: 94  TINMKILKDWIFVLPITT------VVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              MKI  DW  ++ IT       V+ S +   +D   L  AF  F L+MGI ++ ++
Sbjct: 205 ---MKI--DWKLLISITVIAIAGIVIGSQLSKKIDGKKLKPAFGWFILIMGIYIITKE 257


>gi|30249840|ref|NP_841910.1| hypothetical protein NE1888 [Nitrosomonas europaea ATCC 19718]
 gi|30180877|emb|CAD85799.1| Domain of unknown function DUF81 [Nitrosomonas europaea ATCC 19718]
          Length = 266

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 17/221 (7%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP+L+  F  +G      +H+A+GT+  +I  T++ S   H  HG +N  I++   ++
Sbjct: 28  LMVPILASVFMSLGFPADHILHIALGTTTAIITLTAISSLRAHHAHGAVNWWIVR---YI 84

Query: 107 LP---ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG 163
            P      +  S +   +    L   F +F       M    +       P     +  G
Sbjct: 85  TPGIIAGALAGSTLAGQLSSRILGIIFVLFIYFAATQMWLNLKPGTGHVLPGKAGMFAAG 144

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            V G LS  + +GGG+ T   +      ++ A  T+A V     FP  L    +G+ +NG
Sbjct: 145 SVIGALSSLVAIGGGLLTVPFLTACQIRLHHAIGTAAAVG----FPVALASA-AGYAING 199

Query: 224 ------LPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 LP ++LG++ + A++ +   S +  PL  + ++++
Sbjct: 200 LLLTQPLPDYALGYIYLPALITVGLASTVTAPLGARAAHVL 240


>gi|255030910|ref|ZP_05302861.1| hypothetical protein LmonL_20561 [Listeria monocytogenes LO28]
          Length = 220

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 104/200 (52%), Gaps = 19/200 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLF-GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
           ++D I   ++A  LS ++ G F G+GGG++++P+L     LMG+        A  ++L V
Sbjct: 1   IMDIITYFLIA--LSTSVVGSFLGIGGGVILLPIL----LLMGVSQGTA---AFSSALTV 51

Query: 78  IA-PTSVMSFMEHRRHGTINMKILKDWIFVLPITTV--VTSLMISHVDKSFLNKAFAIFC 134
                   S    R+ G + +  LK  +  +P T +  + + M+      FL  A  +  
Sbjct: 52  FTMAIFTCSIYYKRKQGNVGLA-LKIAVTSIPTTFIGAMVNQMLPEAVYRFLYGA--LIV 108

Query: 135 LLMGILMLKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGAS 191
           +L+GI++ K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +
Sbjct: 109 VLLGIMIWKKKRNNEKPHFLSKYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLN 168

Query: 192 IYKATATSAGVSALIAFPAL 211
              A+ATS+ V+ L +  ++
Sbjct: 169 QKTASATSSYVTLLTSLASI 188


>gi|227329064|ref|ZP_03833088.1| hypothetical protein PcarcW_17710 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 230

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 13/138 (9%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           + G+GGGL+ +P+L   F   G+D     H+A GT+L +I P  ++ F+ +R+   I+ +
Sbjct: 1   MLGIGGGLIAIPILGVLF---GMDQ----HMAQGTALVMITPNVLIGFLRYRQRNRIDTR 53

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-----KRDRLYCERKF 153
           +          +  + + + S +D   L +AFA F L++    +     K+     E   
Sbjct: 54  VALTMCAFATGSAYLAAHIASSIDVHNLQRAFATFLLVLAAFYMWQWYNKKRSQTSEIVL 113

Query: 154 PDNYVKYIWGMVTGFLSG 171
              Y+  + G+ +GF+SG
Sbjct: 114 STKYLPLL-GVASGFMSG 130


>gi|297620756|ref|YP_003708893.1| hypothetical protein wcw_0516 [Waddlia chondrophila WSU 86-1044]
 gi|297376057|gb|ADI37887.1| putative membrane protein [Waddlia chondrophila WSU 86-1044]
          Length = 268

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 8/236 (3%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP     F +     +  +HVA+GTSLGV+  T++ S   H     I    L+ +   + 
Sbjct: 31  VPAFLFFFHVFEFPATYTIHVAIGTSLGVMIFTAISSSGAHFLKKGIQWDYLRYYAPGII 90

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML----KRDRLYC---ERKFPDNYVKYI 161
             TV  +L+   +    L   F+ +    GI  +    K++  Y     +K P       
Sbjct: 91  CGTVFGALIAHTLPNRKLVTLFSTYIFCFGIYFIYTAFKKENPYQFKDHKKPPRAITTGG 150

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
            G++ G +   LGVGG   T   +  +   +  A +TSA VS L+     L  +Y G G 
Sbjct: 151 VGLIGGTICSILGVGGAPITIPFLTSHHVQLKHAISTSAFVSLLVGTVGTLSYLYFGLG- 209

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   SLG++ +  +LI    S+L  P    L+YM+  + L   F + +   SFV
Sbjct: 210 SQVSNGSLGYLYLPGMLIAGLSSVLSAPFGANLAYMLPTRILRAIFGIFLVIVSFV 265


>gi|268324617|emb|CBH38205.1| conserved hypothetical membrane protein [uncultured archaeon]
          Length = 276

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 119/250 (47%), Gaps = 19/250 (7%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G   GL GVGG  +MVPV    F  MG    + + +A G++L V+ PT++     H + G
Sbjct: 18  GFAEGLLGVGGCFIMVPVTFFLFTEMGYSPDVALMLAFGSNLLVVFPTAISGAWAHTKKG 77

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF--AIFCLLMGI-----LMLKRDR 146
            +  K+      VL I   V +L+ S +    LN+A    +F +++G+     L++K  +
Sbjct: 78  AVWWKVG----IVLGICGSVGALIGSTIASQLLNEAILKPVFGVVIGLGAVSMLIMKPQK 133

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA--SIYKATATSAGVSA 204
           +  + K  DN +      +   +   +   GG    + +L  G    +++A  TS  +  
Sbjct: 134 IEEDPK--DNPLLLAACGLPIGIISGMIGIGGGIITVPVLAMGLKYKMHRAVGTSLSMMI 191

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVN--IGAVLIILPISILITPLATKLSYMIGKKY 262
             +F   +  + +G+ +  LPP+S+G+VN  + A L I  I + I  +  ++++ +  K 
Sbjct: 192 FTSFAGSIGYMINGFSVPDLPPFSIGYVNLLVWACLTISSIPVAI--IGARIAHRLPAKQ 249

Query: 263 LTIGFSMIMF 272
           L   F  +MF
Sbjct: 250 LRYIFIAVMF 259


>gi|239994619|ref|ZP_04715143.1| hypothetical protein AmacA2_09054 [Alteromonas macleodii ATCC
           27126]
          Length = 268

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 2/216 (0%)

Query: 49  VPVLSKAF-QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           VPVLS      MG+     M VA+ TSL  I  T + S   H + G I   ++      +
Sbjct: 34  VPVLSYLLIHFMGMTTETVMPVAIATSLSTIIFTGMSSAFAHYKLGNIQRHVVLYTGLGI 93

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
                  + + SH+    L   FA+  +L+ + M+   +   E       +  + G   G
Sbjct: 94  AFGAFAGAQIASHISGELLKDVFAVLVILIAMQMIFGKQKASENDASKGTLATVGGG-AG 152

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            LS  +G+GGG      ++++  ++  A   +A    +IA       I +G+    +P  
Sbjct: 153 LLSALMGIGGGALLVPALVWFRVNVRAAIGCAAFCGLIIAVFGTTSFIVAGYNAIDVPEH 212

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           SLG+V + A   I+  S+    +  KL   +  + L
Sbjct: 213 SLGYVYLPATAGIVATSMFTANIGAKLGQRVNVRVL 248


>gi|227112658|ref|ZP_03826314.1| hypothetical protein PcarbP_06839 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 230

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 13/138 (9%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           + G+GGGL+ +P+L   F   G+D     H+A GT+L +I P  ++ F+ +R+   I+ +
Sbjct: 1   MLGIGGGLIAIPILGVLF---GMDQ----HMAQGTALVMITPNVLIGFLRYRQRNRIDTR 53

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-----KRDRLYCERKF 153
           +          +  + + + S +D   L +AFA F L++    +     K+     E   
Sbjct: 54  VALTMCAFATGSAYLAAHIASSIDVHNLQRAFATFLLVLAAYYMWQWYNKKRSQTSEIVL 113

Query: 154 PDNYVKYIWGMVTGFLSG 171
              Y+  + G+ +GF+SG
Sbjct: 114 STKYLPLL-GVASGFMSG 130


>gi|319785839|ref|YP_004145314.1| hypothetical protein Psesu_0221 [Pseudoxanthomonas suwonensis 11-1]
 gi|317464351|gb|ADV26083.1| protein of unknown function DUF81 [Pseudoxanthomonas suwonensis
           11-1]
          Length = 264

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 13/225 (5%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
             L G+     MH A+ +SL  I  T + S   H + G++    +   +  L +   + S
Sbjct: 35  LPLFGVPQEAAMHAALASSLASIVLTGLSSARSHAKRGSVLWPTVAWMVPGLLLGGWLGS 94

Query: 116 LMISHVDKSFLNKAFAIFCLL----MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSG 171
            +   +D + L    A++CL+    +G    +      +   P  +     G   G LS 
Sbjct: 95  GLAVALDDTVLRWVVAVYCLVAAWQIGFGSTRAPADGSDVAPPRGWPMTAAGGGIGALSA 154

Query: 172 ALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN----GLPPW 227
            +G+GGG  T  L+++ G    +A  TS+     IA     +   +G+ ++     LP  
Sbjct: 155 VVGIGGGSMTVPLLVWRGVRPVRAVGTSSACGVAIA-----IASATGYAVHAPPGALPEH 209

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           ++G+V + A L +   S+L  PL T+L++ I    L   F++ + 
Sbjct: 210 AIGYVYLPAALGVAMASVLSAPLGTRLAHAISGHALRRVFAVFLL 254


>gi|52549977|gb|AAU83826.1| hypothetical protein permease [uncultured archaeon GZfos34A6]
          Length = 276

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 31/256 (12%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G   GL GVGG  +MVPV    F  MG    + + +A G++L V+ PT++     H + G
Sbjct: 18  GFAEGLLGVGGCFIMVPVTFFLFTEMGYSPDVALMLAFGSNLLVVFPTAISGAWAHTKKG 77

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILMLKRDRLY 148
            +  K       VL I   V +L+ S +    LN+A     F I   L  + ML R    
Sbjct: 78  AVCWKAG----IVLGICGSVGALIGSTISSQLLNEAILAPVFGIVIGLGAVGMLIRKPQE 133

Query: 149 CERKFPDNYVKYIWGMVTGFLSGALGVGGGIF------------TNLLMLFYGASIYKAT 196
            E    D          T  L  A G+  GI               +L +     +++A 
Sbjct: 134 IEEDPKD----------TPLLLAACGLPIGIICGMIGIGGGSITVPVLAMGLKYKMHRAV 183

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            TS  +    +F   +  + +G+ +  LPP+S+G+VN+     +   SI +  +  ++++
Sbjct: 184 GTSLSMMLFTSFAGSIGYMINGFSVPDLPPFSIGYVNLITWACLAISSIPVAIIGARIAH 243

Query: 257 MIGKKYLTIGFSMIMF 272
            +  K L   F  +MF
Sbjct: 244 RLPAKQLRYIFIAVMF 259


>gi|150399001|ref|YP_001322768.1| hypothetical protein Mevan_0247 [Methanococcus vannielii SB]
 gi|150011704|gb|ABR54156.1| protein of unknown function DUF81 [Methanococcus vannielii SB]
          Length = 277

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 27/185 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF- 105
           +MVP+L+  FQ +GI +   +  A+GTSL VI  TS+ S  EH +        LK+ IF 
Sbjct: 31  LMVPILTYIFQSLGISEDNSIAFAVGTSLSVIFVTSLKSAYEHHK--------LKNIIFN 82

Query: 106 ---VLPITTVVTSLMISHVDKSFLNKAFA--IFCLLMGILMLK--------RDRLYCERK 152
              +L I+ +  +++  H+  ++L+      +F +++ IL L          + L   ++
Sbjct: 83  YSLLLGISGLFGTIVGVHIVTNYLDGGLHKMLFGIILIILSLNMALNTVTPENELDITQE 142

Query: 153 FPDNYVKY----IWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIA 207
              +  KY     +G++ G LS   G+GGG I   +L L     I K+  TS G+ ++++
Sbjct: 143 LKCDTTKYPLILAFGIIMGVLSSVFGIGGGTIAVPVLTLCLKLPIKKSVGTSLGMMSIVS 202

Query: 208 FPALL 212
               L
Sbjct: 203 LGGFL 207


>gi|67923462|ref|ZP_00516939.1| Protein of unknown function DUF81 [Crocosphaera watsonii WH 8501]
 gi|67854697|gb|EAM49979.1| Protein of unknown function DUF81 [Crocosphaera watsonii WH 8501]
          Length = 258

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 23/194 (11%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + ++I++   SG L+G+ G+GGG V+VP+L  AF    +        A+ TS   I 
Sbjct: 2   LDEVVILILSGLGSGLLAGVLGIGGGTVLVPLL-LAFDYTSLQ-------AIATSSLAIF 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLP--ITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
            TS    +++ R G ++ +  +  +  +P  ITT    L+ + + +  L  AFA  C+L+
Sbjct: 54  ITSSAGSIQNWRMGYLDFQ--RVILLGIPALITTQFGVLVANRIPEFILLTAFA--CMLI 109

Query: 138 GILMLKRDRLY--------CERKFPDNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFY 188
             + L   R           E +  +     + G++ GFL+G  G+GGG I   L ML  
Sbjct: 110 FNIFLSNLRRQLVTTPHQVSEVRLSEKVACLLTGVIVGFLAGLFGIGGGVIMVPLQMLLL 169

Query: 189 GASIYKATATSAGV 202
              I  A  TS GV
Sbjct: 170 KEEIKVAIQTSLGV 183


>gi|296136522|ref|YP_003643764.1| protein of unknown function DUF81 [Thiomonas intermedia K12]
 gi|295796644|gb|ADG31434.1| protein of unknown function DUF81 [Thiomonas intermedia K12]
          Length = 268

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 16/233 (6%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           V  LS A   +GI     +HVA+ TS+  I  T + S   H R G +   +   W ++ P
Sbjct: 31  VAALSFALPALGIPADEVIHVAVATSMASIVLTFISSATAHIRRGGV---LWPSWRWLAP 87

Query: 109 ITTVVTSLMISHVDK----SFLNKAFAIFCLLMGILML---KRDRLYCERKFPDNYVKYI 161
              V+   + +H+ +      L    A FC +M + M    ++  +  +   P +     
Sbjct: 88  -GMVIGGFIGAHLAQMLSGPVLRYVIAGFCAVMAVQMAAGKRKKTVPGQEHIPRSPWLLP 146

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL---VRIYSG 218
            G+  G +S  +G+GGG  T  L++  G    KA ATS      IA  + L   + +++ 
Sbjct: 147 AGVGIGAVSSVVGIGGGSMTVPLLVALGVQPVKAVATSTVCGLAIALSSALSYMISVHA- 205

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
              + LPP + G+V + A       S+++ P   ++++ I    L   FS+ +
Sbjct: 206 -PAHPLPPGAFGYVFLPAAAATAVASMVLAPYGVRVAHRISGDALKRVFSIFL 257


>gi|159906095|ref|YP_001549757.1| hypothetical protein MmarC6_1713 [Methanococcus maripaludis C6]
 gi|159887588|gb|ABX02525.1| protein of unknown function DUF81 [Methanococcus maripaludis C6]
          Length = 270

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 109/236 (46%), Gaps = 14/236 (5%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            +MVP L   FQ +GI D   + +A+GTSL VI  TS+ S   H + G I  K    +  
Sbjct: 30  FIMVPTLIYIFQNLGISDDHVVAMAVGTSLSVIFLTSLNSAYSHSKFGNIIWK----YSL 85

Query: 106 VLPITTVVTS-----LMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVK 159
           +L  + ++ +     ++ +++        F I  +++ + M   +     E     NY+ 
Sbjct: 86  LLGFSGIIGTFAGVRIVTNYISGDIHRMLFGIMLIILSLNMAFNKTNPKIESSQNVNYLP 145

Query: 160 YIW-GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
            I  G + G LS   G+GGG I   +L LF    I K+  TS G+  +I+    L  + S
Sbjct: 146 VILCGFLIGVLSSMFGIGGGTIAIPILTLFLKTPIKKSIGTSLGMMVIISLSGFLGYLLS 205

Query: 218 GWGLNGLPPW--SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
              + G   +   +G+V++ + + I  +S++ +    K+S  I    L   F +I+
Sbjct: 206 PVEIAGSYKYLNFIGYVSVTSAVSIGVMSLIFSRYGAKISNNINSSVLKKFFGIIL 261


>gi|294340650|emb|CAZ89042.1| putative Phosphotransferase system, fructose-specific IIC component
           [Thiomonas sp. 3As]
          Length = 269

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 16/233 (6%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           V  LS A   +GI     +HVA+ TS+  I  T + S   H R G +   +   W ++ P
Sbjct: 32  VAALSFALPALGIPADEVIHVAVATSMASIVLTFISSATAHIRRGGV---LWPSWRWLAP 88

Query: 109 ITTVVTSLMISHVDK----SFLNKAFAIFCLLMGILML---KRDRLYCERKFPDNYVKYI 161
              V+   + +H+ +      L    A FC +M + M    ++  +  +   P +     
Sbjct: 89  -GMVIGGFIGAHLAQMLSGPVLRYVIAGFCAVMAVQMAAGKRKKTVPGQEHIPRSPWLLP 147

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL---VRIYSG 218
            G+  G +S  +G+GGG  T  L++  G    KA ATS      IA  + L   + +++ 
Sbjct: 148 AGVGIGAVSSVVGIGGGSMTVPLLVALGVQPVKAVATSTVCGLAIALSSALSYMISVHA- 206

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
              + LPP + G+V + A       S+++ P   ++++ I    L   FS+ +
Sbjct: 207 -PAHPLPPGAFGYVFLPAAAATAVASMVLAPYGVRVAHRISGDALKRVFSIFL 258


>gi|218709277|ref|YP_002416898.1| hypothetical protein VS_1284 [Vibrio splendidus LGP32]
 gi|218322296|emb|CAV18426.1| Conserved hypothetical protein; putative membrane protein [Vibrio
           splendidus LGP32]
          Length = 272

 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 9/166 (5%)

Query: 49  VPVLSK---AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           VPVLS      +++  D  +    A+ TSL  I  TS  S + H ++G +    L  WI 
Sbjct: 37  VPVLSSILLHLEVLPADQVVV--AAIATSLASILFTSTSSALAHHKNGNVPWD-LAPWIM 93

Query: 106 V-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKYIW 162
           + + +  +++  M + + +  +   FA+  +L+ I M    +     ERK P+  V  + 
Sbjct: 94  LGVALGALISGFMAALLPEKVVRIVFAVSVVLIAIKMFLSSKSDTPKERKLPNKGVLTVL 153

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
             +TG LS  +G+GGG     L+ F+   + KA   ++    +IA 
Sbjct: 154 TTITGGLSAMIGIGGGALLVPLLTFFSVDMKKAIGCASACGIVIAL 199


>gi|170728781|ref|YP_001762807.1| hypothetical protein Swoo_4460 [Shewanella woodyi ATCC 51908]
 gi|169814128|gb|ACA88712.1| protein of unknown function DUF81 [Shewanella woodyi ATCC 51908]
          Length = 270

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)

Query: 49  VPVLSK---AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           VPVLS     F+++  +  +    A+ TSL  I  TS  S + H ++G +  +I   WI 
Sbjct: 34  VPVLSAILLHFEVLPPEQVVV--AAIATSLASILFTSTSSAIAHHKNGNVPWEI-APWIM 90

Query: 106 V-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML---KRDRLYCERKFPDNYVKYI 161
             + +  +++  M + + +  +   FA+  LL+ + M     +      RK P+  +  +
Sbjct: 91  TGVGLGALISGFMAALLPEQIVRLVFAVCVLLIALKMFYSSTKTDTATTRKMPNKGLLTL 150

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
           +  +TG LS  +G+GGG     L+ ++   + KA   ++    +IA    +  I SG   
Sbjct: 151 FTTITGGLSAMIGIGGGALLVPLLTYFSIDMKKAIGCASACGIVIALFGSIGYISSGSAH 210

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATK 253
             L     GFV + A+L I+  S    PL  K
Sbjct: 211 FSLADGFAGFVYLPALLGIVCTSWFTAPLGAK 242


>gi|254786098|ref|YP_003073527.1| hypothetical protein TERTU_2056 [Teredinibacter turnerae T7901]
 gi|237684192|gb|ACR11456.1| conserved hypothetical protein [Teredinibacter turnerae T7901]
          Length = 270

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 100/232 (43%), Gaps = 18/232 (7%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV- 106
           +VPVLS  F   GI     +H+A+ T+   +  TS +S   H R G +  +++K W+ + 
Sbjct: 31  IVPVLSSLFNAQGIAPGAEVHLALATAFPCMLVTSAVSTFNHHRQGAVRWRVVK-WLLIG 89

Query: 107 -LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
             P T +V   +++  +  +++  FA+F LL  +      +    +         + G  
Sbjct: 90  LFPATYLVAHSVVNW-NPVYISIFFALFMLLAALQTFVGWQPTSAQPEIGKKTLVVAGAA 148

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            G +S    VGGG    L + +    +  A  +SA +        L + I   WG     
Sbjct: 149 IGGVSAVAAVGGGFLAILFLTYRKIPLKMAIGSSAAM-------GLCIAISGTWGYATAS 201

Query: 226 PWS-------LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
                     LG+V + A +++   SIL+T +  + ++ +  K L   FS++
Sbjct: 202 EQRFTDVSGVLGYVYLPAFVMVSVFSILLTTVGVRHAHKLPNKILKKIFSVV 253


>gi|109900143|ref|YP_663398.1| hypothetical protein Patl_3844 [Pseudoalteromonas atlantica T6c]
 gi|109702424|gb|ABG42344.1| protein of unknown function DUF81 [Pseudoalteromonas atlantica T6c]
          Length = 266

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 1/200 (0%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + M +A+ TSL  I  T++ S   H + G +    L      + +  ++     + +  
Sbjct: 50  KVAMPMAIATSLSTIVLTAISSSRAHYKLGNLRQFYLLWTGLGISVGAIIGPQFATVISA 109

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
             L   FA   LL+ + M+       +R      +  I G++TG +S  +G+GGG     
Sbjct: 110 QSLKTLFATLVLLIAVQMVFLGNKNAKRDVTKQLLLLI-GVITGCISSVMGIGGGAIMVP 168

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
            +L+    +  A   +A    +IA       I +GW    LP WS+GF+ + A   I+  
Sbjct: 169 ALLWCRVDVRAAIGCAAFSGLVIALFGSASFIVAGWNNEHLPQWSVGFIYLPATFGIVLT 228

Query: 244 SILITPLATKLSYMIGKKYL 263
           S+    +  KL   +  K L
Sbjct: 229 SVFTANIGAKLGRSLDTKLL 248


>gi|295395636|ref|ZP_06805828.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294971452|gb|EFG47335.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 266

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 29/189 (15%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L+++ +F +G +SGLFGVGGG ++VP+L     L+G+   +    A GTS+  I PT+
Sbjct: 12  ISLLLIGAF-TGLMSGLFGVGGGFIIVPLL----LLLGMKQKL----AAGTSVTAILPTA 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN--KAFAIFCLLMGIL 140
           ++  + +   G +      DW+  + + T    ++ + V    L       +F + +  L
Sbjct: 63  IVGAIGYMTLGQV------DWLAAILLAT--GMIVGTQVGGRLLQILPESVLFWMFLVAL 114

Query: 141 MLKRDRLYCERKFPDNYVK---------YIWGMVTGFLSGALGVGGGI-FTNLLMLFYGA 190
           +L    L+      D ++           I G++ G LS  LGVGGGI    +L+L +GA
Sbjct: 115 LLIIPSLFLVVPSRDAHIDITVVVGILLVITGVIVGILSALLGVGGGIVMVPVLVLLFGA 174

Query: 191 SIYKATATS 199
           +   A  TS
Sbjct: 175 NDLVAKGTS 183



 Score = 45.8 bits (107), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 11/92 (11%)

Query: 11  MVFLSKDCVVDYIC----LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
           +V  S+D  +D       L+++   + G LS L GVGGG+VMVPVL   F   G +D   
Sbjct: 123 LVVPSRDAHIDITVVVGILLVITGVIVGILSALLGVGGGIVMVPVLVLLF---GAND--- 176

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
             VA GTSL ++ P S+ +   + R+  +++K
Sbjct: 177 -LVAKGTSLLMMIPGSISATTVNYRNKNVDLK 207


>gi|226306945|ref|YP_002766905.1| hypothetical protein RER_34580 [Rhodococcus erythropolis PR4]
 gi|226186062|dbj|BAH34166.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
           PR4]
          Length = 284

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 6/185 (3%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSI-CMHVAMGTSLGV 77
           V+ Y  +++    L+G  + LFG GGG V VPV+  A  L    D+I  MHVA+ +S  V
Sbjct: 18  VLHYALILLAFGALTGVTTVLFGFGGGFVTVPVVYAASTLRA--DAIDPMHVAVASSAAV 75

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +   S+ + +  R+ G +  + ++  I  +     + ++   HVD   +   F ++ ++ 
Sbjct: 76  MVVNSLSATIAFRKSGRLRAEYIRPLIGPVAAGAGLGAVAAGHVDDGAVRILFVLYLVVT 135

Query: 138 GILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            +  L R         R+  D +     G+  G ++  LGVGG + T  +M   G  +  
Sbjct: 136 ILDSLLRQGFLTPPEPREHLDRHGVRAVGIGIGAVASFLGVGGSVMTVPMMRRGGVPMAD 195

Query: 195 ATATS 199
           A A++
Sbjct: 196 AAASA 200


>gi|326404086|ref|YP_004284168.1| hypothetical protein ACMV_19390 [Acidiphilium multivorum AIU301]
 gi|325050948|dbj|BAJ81286.1| hypothetical protein ACMV_19390 [Acidiphilium multivorum AIU301]
          Length = 271

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 20/181 (11%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGID-------DSICMHVAMGTSLGVIAPTSVM 84
           LSG  + LFG GGG V+VP+L   F ++ +D           MHVA+ TS  V+   S M
Sbjct: 13  LSGVTTVLFGFGGGFVIVPLL---FSILTVDLGRGTSASPAAMHVAVATSTAVMVVNSFM 69

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF-------CLL- 136
           + M H R G +    L      + I   + +++ +      +  AF  +       CLL 
Sbjct: 70  ATMRHARLGNLVAAELWPLAGYIAIGAGIGAMLATSASDDVMRWAFVAYLGVTILDCLLR 129

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
            G L    D     R  P  +   + G++ G ++  LGVGG + T  +    G  + +AT
Sbjct: 130 RGFLSRAADDGPLPR-MPAQFTA-VAGIIIGTIATFLGVGGSVMTVPMNRRRGMDMTRAT 187

Query: 197 A 197
           A
Sbjct: 188 A 188


>gi|254422238|ref|ZP_05035956.1| conserved domain protein, putative [Synechococcus sp. PCC 7335]
 gi|196189727|gb|EDX84691.1| conserved domain protein, putative [Synechococcus sp. PCC 7335]
          Length = 266

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 28/199 (14%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +A   SG L+G  G+GGG ++VPVL +    +G +     H A  TS   I 
Sbjct: 3   ISSVVLLSIAGLFSGILAGFLGIGGGTLLVPVLLQ----LGFES----HAATATSSLAIL 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV----TSLMISHVDKSFLNKAFAIFCL 135
            TS     ++ R G ++ K     I +L I   +     +L++  V + +    F +  L
Sbjct: 55  VTSTTGSAQNWRMGYLDPK----QILLLGIPAAIAGFFAALLVDGVPQYWQLFGFGLLML 110

Query: 136 LMGILMLKRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGALGVGGG-IFTNL 183
               L+  + R+  + +  ++             + I G ++GF++G  GVGGG I   L
Sbjct: 111 SNLYLVSLKKRVIQKAQSRESKAVAAPAITPGIARTITGTISGFMAGLFGVGGGVILVPL 170

Query: 184 LMLFYGASIYKATATSAGV 202
            +L  G  I  A  TS GV
Sbjct: 171 QILLLGEGIKTAVRTSLGV 189



 Score = 41.2 bits (95), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 7/66 (10%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           +SG ++GLFGVGGG+++VP+     Q++ + + I    A+ TSLGVI  TS+   + H  
Sbjct: 151 ISGFMAGLFGVGGGVILVPL-----QILLLGEGI--KTAVRTSLGVIVITSIFVCIGHAI 203

Query: 92  HGTINM 97
            G I +
Sbjct: 204 QGNIRL 209


>gi|85860407|ref|YP_462609.1| permease [Syntrophus aciditrophicus SB]
 gi|85723498|gb|ABC78441.1| permease [Syntrophus aciditrophicus SB]
          Length = 189

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 63/113 (55%), Gaps = 8/113 (7%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV-IAPTSVMSFMEH 89
           F++G  +GLFG+GGG+++VP L     L G      +H A+GTSL + + P  + + + +
Sbjct: 74  FIAGIAAGLFGIGGGVLIVPAL---VYLAGFP----LHTAVGTSLAILLPPVGLAAVLTY 126

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            R+G +N+K        L + + + +++ +H+    L  AF IF   +GI ++
Sbjct: 127 YRYGQVNLKAALIVAAALFLGSWLGAILANHLSGPHLKLAFGIFVAGLGIYLI 179


>gi|153848085|ref|ZP_01993972.1| choline dehydrogenase [Vibrio parahaemolyticus AQ3810]
 gi|149744694|gb|EDM56162.1| choline dehydrogenase [Vibrio parahaemolyticus AQ3810]
          Length = 216

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 65/131 (49%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           + MH+A+ TSL  I  TS  S + H + G ++M ++K  +  + I   V + +   +   
Sbjct: 1   MSMHMALATSLASIIVTSGSSALNHLKLGNVDMFVVKWLMPGVVIGGFVGANIAEWIPTH 60

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
           +L K F +  L + + M +  ++  E+  P + V  ++G   G +S   G+GGG  +   
Sbjct: 61  YLPKVFGVIVLCLAVQMFRSIKVKSEKPMPSSPVTMMYGTGIGVVSSLAGIGGGSLSVPF 120

Query: 185 MLFYGASIYKA 195
           +  +G  + KA
Sbjct: 121 LNKHGVEMRKA 131


>gi|152974977|ref|YP_001374494.1| hypothetical protein Bcer98_1177 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152023729|gb|ABS21499.1| protein of unknown function DUF81 [Bacillus cytotoxicus NVH 391-98]
          Length = 266

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 39/205 (19%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +YI L+ +   ++GT+  L G+GGG+++VP+      L+G+  S+   +A+GTS+  +  
Sbjct: 2   EYIMLLFIG-LIAGTIGSLVGLGGGIIVVPL------LIGL-HSLSPQIAVGTSIVTVVF 53

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA-----FAIFCL 135
           T + S + + +H  ++ K       +L I +    ++ S  +K FLN+      F IF +
Sbjct: 54  TGLSSTLAYVKHKRVDYK----SGLILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLI 108

Query: 136 LMGILMLKRDRL---------YCERKFPDN-----------YVKYIWGMVTGFLSGALGV 175
            + IL++ RD+L           +R F D            ++  +   + GF+SG  G+
Sbjct: 109 CVSILLMLRDKLKPLSLSNATVIKRSFTDTEGNTAYYQFPPFLSILIAFIVGFISGLFGI 168

Query: 176 GGG-IFTNLLMLFYGASIYKATATS 199
           GGG +    +ML +      A ATS
Sbjct: 169 GGGALLVPAMMLLFAFPAQIAVATS 193



 Score = 35.8 bits (81), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I+ +F+ G +SGLFG+GGG ++VP +   F       +    +A+ TS+ ++  ++++
Sbjct: 151 LSILIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAQIAVATSMFIVLLSAIV 203

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 204 SSFTHISLGNVS------WIYAL 220


>gi|293602274|ref|ZP_06684722.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292819353|gb|EFF78386.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 273

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 101/240 (42%), Gaps = 27/240 (11%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL+   Q   +   + + +A+ TS+ VI  TS  S   H R G ++ +I++     +  
Sbjct: 36  PVLTFFLQGQELSAGLAVKMAIATSMAVILFTSFSSVSAHHRRGAVDWQIVRGLTPGIVA 95

Query: 110 TTVVTSLMI-SHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
            ++++SL + + +  + L   F++F L   + M +  +    R  P              
Sbjct: 96  GSLISSLGVFALLKGNVLAVVFSVFMLFSAVQMFRGRQPAAARGLPGA------------ 143

Query: 169 LSGALGVGGGI------------FTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRI 215
             G LG G  I            F ++  L +    +++A ATSA +   IA   +   I
Sbjct: 144 -PGLLGAGSAIGALSGLVGVGGGFISVPFLSWCNVPVHRAVATSAALGFPIALANVGGFI 202

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G    G P  S+GFV    + ++   S+L  PL  + ++ +    L   F+ ++F  S
Sbjct: 203 LGGLDTAGRPAHSMGFVWTPGLALVAAFSVLTAPLGARAAHRLPVARLKRAFAGMLFAVS 262


>gi|261820594|ref|YP_003258700.1| hypothetical protein Pecwa_1285 [Pectobacterium wasabiae WPP163]
 gi|261604607|gb|ACX87093.1| protein of unknown function DUF81 [Pectobacterium wasabiae WPP163]
          Length = 286

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 10/127 (7%)

Query: 58  LMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM 117
           L G+D     H+A GT+L +I P  ++ F+ +R+   I+ ++          +  + + +
Sbjct: 73  LFGMDQ----HMAQGTALVMITPNVLIGFLRYRQRNRIDTRVALTMCLFATGSAYLAAHI 128

Query: 118 ISHVDKSFLNKAFAIFCLLMGILML-----KRDRLYCERKFPDNYVKYIWGMVTGFLSGA 172
            S +D + L +AFAIF L++    +     K+     E     +Y+  + G+ +GF+SG 
Sbjct: 129 ASSIDVNRLQRAFAIFLLVLAAYYMWQWYNKKRSQPPEVVLSTHYLPLL-GVASGFMSGI 187

Query: 173 LGVGGGI 179
             VGGG+
Sbjct: 188 FTVGGGL 194


>gi|332140098|ref|YP_004425836.1| hypothetical protein MADE_1003450 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|332143104|ref|YP_004428842.1| hypothetical protein MADE_1018600 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550120|gb|AEA96838.1| hypothetical protein MADE_1003450 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327553126|gb|AEA99844.1| hypothetical protein MADE_1018600 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 268

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 110/245 (44%), Gaps = 12/245 (4%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAF-QLMGIDDSICMHVAMGTSLGVIAPTS 82
           CLI+    + G L+G+ G+GGGL++VP LS      MG+     M VA+ TSL  I  T 
Sbjct: 11  CLIL--GSVVGILAGMLGIGGGLIIVPALSYLLVHFMGMTTETVMPVAIATSLSTIIFTG 68

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H + G I   I+      +    +  + + SH+    L   FA+  +L+ + M 
Sbjct: 69  TSSALAHYKLGNIQRYIVLYTGLGIAFGAIAGAQVASHMSGELLKDVFAVLVILIALQM- 127

Query: 143 KRDRLYCERKFPDNYVKY----IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
               ++ ++K  DN          G   G LS  +G+GGG      ++++  +I  A   
Sbjct: 128 ----IFGKQKASDNEASKGTLAAVGGTAGILSALMGIGGGALLVPALVWFRVNIRAAIGC 183

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +A    +IA       + +GW    +P  SLG+V + A   I+  S+    +  KL   +
Sbjct: 184 AAFCGLVIAVFGTTSFVIAGWNAIDVPEHSLGYVYLPATAGIVATSMFTANIGAKLGQRV 243

Query: 259 GKKYL 263
             + L
Sbjct: 244 NVRVL 248


>gi|311032416|ref|ZP_07710506.1| hypothetical protein Bm3-1_18063 [Bacillus sp. m3-13]
          Length = 289

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 87/191 (45%), Gaps = 21/191 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I+  F    LSG FG+GGGLV+ PVL     L+G         A+ TSL     TS+ 
Sbjct: 5   LFILLGFSISMLSGFFGIGGGLVLTPVL----LLIGYTP----IEAISTSLLYTIGTSMA 56

Query: 85  SFMEHRRHGTINMK----ILKDWIFVLPITTVVTSLMISH-VDKSFLNKAFAIFCLLMGI 139
               H +   I  K    I    +    I   V S + S+  D + +   +         
Sbjct: 57  GVYAHFKMKNIQWKAAVIIGASGVVATQIAYPVVSWLESNGYDTTVVPILYLALLTYFAY 116

Query: 140 LMLKRDR-----LYCERKFPDNYVKYIW-GMVTGFLSGALGVGGG-IFTNLLMLFYGASI 192
            MLK+D+      Y       ++ K+I+ G + GFLS  LGVGGG I   LL+ +YG S 
Sbjct: 117 KMLKKDKGDNRVDYDATSNKQSFWKFIFIGFIAGFLSTTLGVGGGFIIVPLLIAYYGFSS 176

Query: 193 YKATATS-AGV 202
            +A ATS AGV
Sbjct: 177 KQAVATSLAGV 187


>gi|332184891|gb|AEE27145.1| hypothetical membrane protein [Francisella cf. novicida 3523]
          Length = 262

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/247 (21%), Positives = 112/247 (45%), Gaps = 6/247 (2%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           SG +SG+FG G GL+ VP            +   M VA+ +++       +++  +  ++
Sbjct: 17  SGFVSGIFGGGSGLINVPGFYLLLHYFYPLNDHLMQVAIASAVSSGVLVGILATFKQHKY 76

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
             I    L+  +F + +  ++   +++ +  + L   F+I  ++M   M ++ +    + 
Sbjct: 77  KQICYDTLRWSLFSILLGGILGVFLVNVIKSNDLKIVFSILLIIMATWMWRKTK----KA 132

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGI--FTNLLMLFYGASIYKATATSAGVSALIAFPA 210
                   I   ++ F +G   +  GI  F   L++  G  I KA  TS  ++  I+   
Sbjct: 133 LKVWQAPLILKTLSAFFAGMCTMLSGISVFFIPLLIKCGLDIRKAIGTSTIITFFISLVM 192

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            +  I  GW  + LPP+ +G++N+   L  L  S++   +  K++ +   K+L   + ++
Sbjct: 193 SIFFISFGWHASNLPPFCIGYLNLIIFLAGLIPSLIGVNIGVKVTALFSHKHLQTIYILM 252

Query: 271 MFTTSFV 277
           MF  + V
Sbjct: 253 MFIIAIV 259


>gi|219127009|ref|XP_002183737.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404974|gb|EEC44919.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 2798

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 38/201 (18%)

Query: 33  SGTLSGLFGVGGGLVMVPVL-SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           +G L  L G+GGG VM+P++ S+A +L         H A GTSL  ++ T V     +  
Sbjct: 57  AGVLGSLAGMGGGFVMIPLMTSRALRLT-------QHQAHGTSLFAVSATGVAGAWSYVH 109

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHV----DKSFLNKAFAIFCLLMGILMLKR--- 144
                 ++  +    + +  +VT+ M +HV      + L KA  +  LLM   +  +   
Sbjct: 110 ------EVQWESAAAIALCGMVTARMGAHVTTRTSATTLRKALGVLMLLMAPAVPAKAYL 163

Query: 145 ---------DRLYCERKFPDNYVKYI----WGMVTGFLSGALGVGGG-IFTNLLMLFYGA 190
                     R   E    +   +++     G+ +GFL+G  GVGGG I    L L    
Sbjct: 164 TQRAEATEASRAEAETMPSEPLSRFLPPAAIGLGSGFLAGLFGVGGGTIVVPALTLATDC 223

Query: 191 SIYKATATSAGVSALIAFPAL 211
           + Y+A ATS    A +  PAL
Sbjct: 224 THYQALATSL---AAMTLPAL 241



 Score = 43.1 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 9/68 (13%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV-AMGTSLGVIAPTSVMSFMEHRR 91
           SG L+GLFGVGGG ++VP L+ A        + C H  A+ TSL  +   ++     H R
Sbjct: 198 SGFLAGLFGVGGGTIVVPALTLA--------TDCTHYQALATSLAAMTLPALSGTYTHYR 249

Query: 92  HGTINMKI 99
            G + ++I
Sbjct: 250 AGNVAVRI 257


>gi|52081735|ref|YP_080526.1| hypothetical protein BL02149 [Bacillus licheniformis ATCC 14580]
 gi|52787121|ref|YP_092950.1| hypothetical protein BLi03429 [Bacillus licheniformis ATCC 14580]
 gi|319647651|ref|ZP_08001869.1| YunE protein [Bacillus sp. BT1B_CT2]
 gi|52004946|gb|AAU24888.1| conserved protein YunE [Bacillus licheniformis ATCC 14580]
 gi|52349623|gb|AAU42257.1| YunE [Bacillus licheniformis ATCC 14580]
 gi|317389992|gb|EFV70801.1| YunE protein [Bacillus sp. BT1B_CT2]
          Length = 273

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 78/137 (56%), Gaps = 10/137 (7%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +Y+ LII+  F++GT+  L G+GGG+V+VP L     L  + D +   +A+GTSL VI  
Sbjct: 2   EYLILIILG-FIAGTIGSLVGLGGGIVIVPSLLFLAGLPTLFDHVTPQMAVGTSLVVIIF 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA----IFCLL 136
           T + S + + ++ T++ K     IF   I +   S++ +HV   F + +F+    IF +L
Sbjct: 61  TGLSSTIAYMKYKTVDYK--SGLIFF--IGSGPGSIVGAHVSTYFSSDSFSLWFGIFMIL 116

Query: 137 MGI-LMLKRDRLYCERK 152
           + + LM+K+     E+K
Sbjct: 117 ISLSLMIKKRVKPAEKK 133


>gi|261349442|ref|ZP_05974859.1| integral membrane protein [Methanobrevibacter smithii DSM 2374]
 gi|288861805|gb|EFC94103.1| integral membrane protein [Methanobrevibacter smithii DSM 2374]
          Length = 270

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 119/238 (50%), Gaps = 18/238 (7%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWI--- 104
           +VP      + +G+D S+ M +++GTSL +I PT+        RH  +   ILK  I   
Sbjct: 33  IVPFQYFLLEYLGVDPSLAMMISLGTSLAIIIPTATSG---ASRHLKVMDNILKPGIRLG 89

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY---- 160
               + +++  L+ S +    L   F   CLL+ I +  R+ +  ++K      K+    
Sbjct: 90  LFGIVGSILGGLIASMLPTQILKIIFG--CLLLFIAI--RNLMSADKKTSKARAKFNLIN 145

Query: 161 --IWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYS 217
             + G++ G  SG LGVGGG+F  L++ + +G S+ +A   S+   +L A    +  I S
Sbjct: 146 IAVVGVLVGISSGLLGVGGGVFIILILTVIFGFSMIEAIGISSVFISLTAIGGTVSYIIS 205

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           GWG+N   P+SLG+V++    +I   S+ +     K+++ + +K L   F +++   S
Sbjct: 206 GWGVNPF-PYSLGYVSLVNFAVIAMFSVPLAYYGAKIAHKVPEKRLKQIFGLVVLYIS 262


>gi|42522827|ref|NP_968207.1| putative permease [Bdellovibrio bacteriovorus HD100]
 gi|39574023|emb|CAE79200.1| putative permease [Bdellovibrio bacteriovorus HD100]
          Length = 259

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 18/120 (15%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G ++G  G GGG ++VP L +          + M VA+GTSLGVIA  S++ F      G
Sbjct: 151 GAVTGFVGAGGGFLIVPSLVRM-------SGLRMKVAVGTSLGVIAANSMLGF-----FG 198

Query: 94  TINMKILKDWIFVLPITTV------VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            +  +   D++ +L +  +      V S    H  ++ L  AF IF LL+G L++ +  L
Sbjct: 199 DLWARTPMDFVLLLKVGALAVAGIFVGSYWSQHTSEARLKPAFGIFVLLLGGLIIVQQAL 258


>gi|313675258|ref|YP_004053254.1| hypothetical protein Ftrac_1151 [Marivirga tractuosa DSM 4126]
 gi|312941956|gb|ADR21146.1| protein of unknown function DUF81 [Marivirga tractuosa DSM 4126]
          Length = 271

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 20/128 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LIIV   + G L+GL G GGG +++P L    +L        M  A+GTSL +IA  S++
Sbjct: 154 LIIVEGVVVGALTGLVGAGGGFLIIPALVVLAKL-------PMKEAVGTSLLIIAAKSLI 206

Query: 85  SFM-EHRRHGTINMKILKDWIFVLPITTV------VTSLMISHVDKSFLNKAFAIFCLLM 137
            F+ + +  G I      DW+F+   T +      + + + + +D   L K F  F L+M
Sbjct: 207 GFIGDIQSGGDI------DWMFLTIFTAIAGAGIFIGTYLSNLIDGQKLKKGFGWFVLIM 260

Query: 138 GILMLKRD 145
           G +M+ ++
Sbjct: 261 GSVMIYKE 268


>gi|91791973|ref|YP_561624.1| hypothetical protein Sden_0611 [Shewanella denitrificans OS217]
 gi|91713975|gb|ABE53901.1| protein of unknown function DUF81 [Shewanella denitrificans OS217]
          Length = 294

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 13/194 (6%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P     F   G+   + MH A+ TS+  I  TS  S   H   GT+   I+      + +
Sbjct: 31  PAFVSIFLAQGMQSHLVMHYAIATSMACILVTSFASMRAHNAKGTVQWPIVNSMAPWIIL 90

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD---RLYCERKFPDNYVKYIWGMVT 166
            T   + + + +    L   F++F L + I ML++    +++  ++   + +  + G+  
Sbjct: 91  GTFAATFIATALSTQVLAGIFSVFMLSVAIKMLRQTSSGQVHDSKRLTPSSMG-LAGLGI 149

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL-- 224
           G +S  + +GGG  T   +   G +I  A  TSA +   IA  A L     G+ +NGL  
Sbjct: 150 GAISALVSIGGGSLTVPYLSNRGINIKHAIGTSAAIGLPIAIAASL-----GYWVNGLTS 204

Query: 225 --PPWSLGFVNIGA 236
                 +G  +IGA
Sbjct: 205 AEAAQEMGIYDIGA 218


>gi|150390000|ref|YP_001320049.1| permease [Alkaliphilus metalliredigens QYMF]
 gi|149949862|gb|ABR48390.1| permease [Alkaliphilus metalliredigens QYMF]
          Length = 122

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 15/114 (13%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G ++GLFG GGG ++VP L+  F        +  H A  T++ +I P +++S   + RH
Sbjct: 18  AGIINGLFGAGGGTIIVPALTFIF-------CVKQHQAHATAISIILPFAMVSSFIYYRH 70

Query: 93  G----TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           G    TI  +I    +    I + + S +++    S+L K F +F +L  I M+
Sbjct: 71  GFAEPTITFQITSGAV----IGSYIGSKLLTRFSASYLRKTFGVFMILASIRMI 120


>gi|254507933|ref|ZP_05120062.1| thymidylate synthase [Vibrio parahaemolyticus 16]
 gi|219549169|gb|EED26165.1| thymidylate synthase [Vibrio parahaemolyticus 16]
          Length = 260

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 13/215 (6%)

Query: 47  VMVPVLSK---AFQLMGIDDS-ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           V+VP+LS     FQ++  +   IC   A+ TSL  I  TS  S + H R+G +  + L  
Sbjct: 23  VIVPILSVILLHFQVLPAEQVVIC---AIATSLASILFTSTSSALAHHRNGNVPWE-LAP 78

Query: 103 WIFV-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML---KRDRLYCERKFPDNYV 158
           WI   + +  +V+  + + + +  +   FA+  +L+ + ML   K D    ER  P+  +
Sbjct: 79  WIMTGVALGALVSGFLAALLPEQVVRIVFAVSVVLIALKMLFGGKGDN-STERAMPNKGL 137

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             +   +TG LS  +G+GGG     L+ F+   + KA   ++    +IA    +  I SG
Sbjct: 138 LTVLTTLTGGLSAMIGIGGGALLVPLLTFFSVDMKKAIGCASACGIVIALSGSVGYITSG 197

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
                L     GFV + A+  I+  S    PL  K
Sbjct: 198 SADFALSDGFAGFVYLPALFGIVCTSWFTAPLGAK 232


>gi|167626676|ref|YP_001677176.1| hypothetical protein Fphi_0457 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167596677|gb|ABZ86675.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 252

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 20/213 (9%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLM-----GIDDSICMHVAMGTSLGVIAPTS 82
           +  F++  +S L G G GL+ VP    AF  +     G+D    M +A+ T  G+    S
Sbjct: 8   IVGFVASFISTLLGGGAGLIAVP----AFYFIIVHTYGVD--FAMQIAIATCCGMSIFLS 61

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LM 141
            ++  +H R G I++  LK ++  L I  +V S++  H++   L   FAI     GI ++
Sbjct: 62  SIATYKHYRKGNIHLGELKYYLVYLSIGALVGSIVAKHINTDLLKIVFAILLFGSGIWMI 121

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L  D      K P +    I+G   G LS  +      F  +  +  G  I KA A ++ 
Sbjct: 122 LHNDNKVV--KLPRSARYSIFGF-CGILS--VLASSTTFATMFFIKIGTDIKKAIAITSV 176

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
              + +  A LV  Y G  +N   P +LG++NI
Sbjct: 177 CVLINSSIAALVLTY-GISIN--VPSTLGYLNI 206


>gi|145220309|ref|YP_001131018.1| hypothetical protein Cvib_1505 [Prosthecochloris vibrioformis DSM
           265]
 gi|145206473|gb|ABP37516.1| conserved hypothetical protein [Chlorobium phaeovibrioides DSM 265]
          Length = 126

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 19/129 (14%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIA 79
             I ++++ S L+G LSG+FG+GGG+++VP L     L+G+      H A  TSL  ++ 
Sbjct: 7   QVITMLLIGS-LAGILSGMFGIGGGVIIVPAL---VLLLGMTQ----HTANATSLVALLL 58

Query: 80  PTSVMSFMEHRRHGTINMKILKDWI-FVLPI----TTVVTSLMISHVDKSFLNKAFAIFC 134
           P  ++  +E+ R G I+M     W+  +L +         + + +H+  S L KAFA+F 
Sbjct: 59  PVGILGALEYYRAGKISMD--NVWLGLILAVGLFGGAYFGAKIATHLSGSVLRKAFAVFT 116

Query: 135 LLMGILMLK 143
              GI+ L+
Sbjct: 117 ---GIVALR 122


>gi|323494501|ref|ZP_08099606.1| hypothetical protein VIBR0546_20083 [Vibrio brasiliensis LMG 20546]
 gi|323311228|gb|EGA64387.1| hypothetical protein VIBR0546_20083 [Vibrio brasiliensis LMG 20546]
          Length = 269

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 5/230 (2%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHV-AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           V+VP+LS      GI  S  + + A+ TSL  I  TS  S + H ++G +    L  WI 
Sbjct: 32  VIVPILSIILLHFGILPSEQVVIGAIATSLASILFTSTSSAIAHHKNGNVPWN-LAPWIM 90

Query: 106 V-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKYIW 162
             + +  +++  M + + +  +   FA+  +L+ + M    +     +RK P+  V    
Sbjct: 91  TGVALGALISGFMAALLPEQVVRIVFAVSVVLIALKMFYSSKSNEPTQRKMPNRGVLTTL 150

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
             + G LS  +G+GGG     L+ F+   + KA   ++    +IA    +  I SG    
Sbjct: 151 TTIVGGLSAMIGIGGGALLVPLLTFFSIDMKKAIGCASACGIVIALFGSIGYITSGSAHF 210

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
            L     GFV + A+  I+  S    P+  K + ++    +   FS+++ 
Sbjct: 211 VLADGFAGFVYLPALFGIVSTSWFTAPMGAKATQVLPVSTIKKLFSVLLL 260


>gi|253689355|ref|YP_003018545.1| hypothetical protein PC1_2986 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251755933|gb|ACT14009.1| protein of unknown function DUF81 [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 255

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 18/180 (10%)

Query: 58  LMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM 117
           L G+D     H+A GT+L +I P  ++ F+ +R+   I+ ++          +    + +
Sbjct: 42  LFGMDQ----HLAQGTALVMITPNVLIGFLRYRQRNRIDTRMALTMCAFATGSAYFAAHL 97

Query: 118 ISHVDKSFLNKAFAIFCLLMGILML-----KRDRLYCERKFPDNYVKYIWGMVTGFLSGA 172
            S +D   L +AFA F L++    +     K+     E+     Y+  + G+ +GF+SG 
Sbjct: 98  ASSIDVHNLQRAFATFLLVLAAYYMWQWYNKKRSQTPEKVLSTKYLPLL-GVASGFMSGI 156

Query: 173 LGVGGG--IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
             VGGG  +   L+ LF       A   + G++ ++  P  L  + S +   G   WS+G
Sbjct: 157 FTVGGGLVVVPALVTLF-----AFAQTQAQGMALILVVPGALAALLS-YSQAGNVDWSIG 210



 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 22/143 (15%)

Query: 6   YNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSI 65
           YN        K     Y+ L+ VAS   G +SG+F VGGGLV+VP L   F       + 
Sbjct: 126 YNKKRSQTPEKVLSTKYLPLLGVAS---GFMSGIFTVGGGLVVVPALVTLF-------AF 175

Query: 66  CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP-----ITTVVTSLMISH 120
               A G +L ++ P ++ + + + + G +      DW   +P     I +V   + ++H
Sbjct: 176 AQTQAQGMALILVVPGALAALLSYSQAGNV------DWSIGVPLALGGIVSVSWGVAVAH 229

Query: 121 -VDKSFLNKAFAIFCLLMGILML 142
            +   +L  AF +  + +G+ ML
Sbjct: 230 KLPVVYLRGAFCLVLVGVGVTML 252


>gi|56965825|ref|YP_177559.1| hypothetical protein ABC4067 [Bacillus clausii KSM-K16]
 gi|56912071|dbj|BAD66598.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 267

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 6/210 (2%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L G LS LFG GGG V+VPVL  AF    I     MH A+GTSL V+   S  S   H +
Sbjct: 14  LIGILSSLFGFGGGFVVVPVLV-AFLPDSIPPDYLMHTAVGTSLAVMIINSFNSTFNHAK 72

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA--IFCLLMGILMLKRDRLYC 149
            G +   + K  +F + I +++  +   +++   L  AF   +  +++  L+ K    + 
Sbjct: 73  KGNVKWVVFKGMVFYIAIGSLIGGVSAVYINSDILKFAFIGLLLYVIVSNLLKKTFTNHV 132

Query: 150 ER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
           E    + P    +   G+  G +S  LGVGG + T       G  +  A A +  +   I
Sbjct: 133 EDQDFRMPSRKSRGPVGVGIGLISTMLGVGGSVMTIPYFRKQGMRMLNAVALATPLGLPI 192

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           A       + +G  +  +P  +LGF+ I A
Sbjct: 193 AIVGAFTFLVTGLQIEDMPGSTLGFIFIPA 222


>gi|184158190|ref|YP_001846529.1| permease [Acinetobacter baumannii ACICU]
 gi|183209784|gb|ACC57182.1| predicted permease [Acinetobacter baumannii ACICU]
          Length = 269

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 7/173 (4%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMH---VAMGTSLGVIAPTSVMSFM 87
           LSG  + LFG GGG V VP+L     Q    + S+ +H   +A+ TS  V+  ++  +  
Sbjct: 11  LSGITTWLFGFGGGFVAVPLLYTVIIQKWSNESSVGIHAMQIAVATSAFVMLCSASFATF 70

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            H R G I+ + ++     + +  +V ++M S  + ++L   F  +  +  I    R   
Sbjct: 71  RHYRSGHIDWQQIRFLWGGIALGGIVGAVMASLFNGNWLRWIFMSYVFITIIDCYYRPGF 130

Query: 148 YCERKFPDNY---VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
               +   +Y    + I G + G+++  LGVGG + T  L+   G+S+ +A A
Sbjct: 131 MVTSRQKQHYGQNSELIKGGIIGWVAALLGVGGSVMTVPLLRRRGSSMAEAAA 183


>gi|116872011|ref|YP_848792.1| integral membrane protein, putative [Listeria welshimeri serovar 6b
           str. SLCC5334]
 gi|116740889|emb|CAK20009.1| integral membrane protein, putative [Listeria welshimeri serovar 6b
           str. SLCC5334]
          Length = 246

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 131/261 (50%), Gaps = 37/261 (14%)

Query: 21  DYICLIIVASFLSGTLSGLF-GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           D I   ++A  LS ++ G F G+GGG++++P+L     LMGI        A  ++L V  
Sbjct: 2   DIITYFLIA--LSTSVVGSFLGIGGGVILLPIL----LLMGISQGTA---AFSSALTVFT 52

Query: 80  -PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF-----AIF 133
                 S    R+ G + + +       + +T++ T+ + + V++      +     A+ 
Sbjct: 53  MAIFTCSIYYKRKQGNVVLAL------KIAVTSIPTTFLGAMVNQMLPESVYRFMYGALI 106

Query: 134 CLLMGILMLKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGA 190
             L+ ++  K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  
Sbjct: 107 VTLLLLMFWKKKRNNEKPHFLSKYRIMPYLFGVIIGFLAGLFGIGGGPIVIPILLLIFML 166

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           +   A+ATS+ V+ L +  ++       + + G   +S+G       + ++P +IL   +
Sbjct: 167 NQKTASATSSYVTLLTSMASI-----GSYAIIGGSDFSIG-------IYMIPGAILGALI 214

Query: 251 ATKLSYMIGKKYLTIGFSMIM 271
            T+L+ ++ +K++ I F++++
Sbjct: 215 GTRLNKLLDEKWIAILFNILL 235


>gi|304315031|ref|YP_003850178.1| hypothetical protein MTBMA_c12770 [Methanothermobacter
          marburgensis str. Marburg]
 gi|302588490|gb|ADL58865.1| conserved hypothetical protein [Methanothermobacter marburgensis
          str. Marburg]
          Length = 259

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%)

Query: 22 YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
          YI  +++   ++G  +GL GVGGG ++ PVL    +  G  + I +  A  TSL VI P 
Sbjct: 6  YIAALLLTGIVAGLATGLLGVGGGFIIAPVLFFLMESSGTPEDIAIRTAFATSLAVILPA 65

Query: 82 SVMSFMEHRRHGTIN 96
          ++     H R G ++
Sbjct: 66 ALTGAYSHYRRGCVD 80


>gi|17548411|ref|NP_521751.1| hypothetical protein RS04702 [Ralstonia solanacearum GMI1000]
 gi|17430658|emb|CAD17341.1| probable permease transmembrane protein [Ralstonia solanacearum
           GMI1000]
          Length = 263

 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 21/154 (13%)

Query: 58  LMGIDDSICMHVAMGTSLGVIAPTSVMSFME-HRRHGTINMKILKDWIFVLPITTVVTSL 116
           L G+D     H+A GT+L +IAP  ++ F+  H+RH  ++++ +     V   +T V + 
Sbjct: 41  LYGMDQ----HLAQGTALVMIAPNVLIGFLRYHQRH-PVHLRSVATLCAVAMASTYVAAR 95

Query: 117 MISHVDKSFLNKAFAIFCLLMGI--LMLKRDRLYCE-----------RKFPDNYVKYIWG 163
             + +D   L  AFA F +++ +   +  RDR + E           R  P   +  + G
Sbjct: 96  FAAGLDADHLRTAFAWFLIVLAVYFALQLRDRPHAEPAAAHPEPGAPRAMPPAAIALL-G 154

Query: 164 MVTGFLSGALGVGGG-IFTNLLMLFYGASIYKAT 196
           + +G +SG   VGGG +    L+  +G S  +A 
Sbjct: 155 IASGGMSGIFTVGGGLVVVPALVTLFGMSQTRAQ 188


>gi|332875490|ref|ZP_08443311.1| hypothetical protein HMPREF0022_02947 [Acinetobacter baumannii
           6014059]
 gi|322508511|gb|ADX03965.1| permease [Acinetobacter baumannii 1656-2]
 gi|323518127|gb|ADX92508.1| permease [Acinetobacter baumannii TCDC-AB0715]
 gi|332736307|gb|EGJ67313.1| hypothetical protein HMPREF0022_02947 [Acinetobacter baumannii
           6014059]
          Length = 271

 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 7/173 (4%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMH---VAMGTSLGVIAPTSVMSFM 87
           LSG  + LFG GGG V VP+L     Q    + S+ +H   +A+ TS  V+  ++  +  
Sbjct: 13  LSGITTWLFGFGGGFVAVPLLYTVIIQKWSNESSVGIHAMQIAVATSAFVMLCSASFATF 72

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            H R G I+ + ++     + +  +V ++M S  + ++L   F  +  +  I    R   
Sbjct: 73  RHYRSGHIDWQQIRFLWGGIALGGIVGAVMASLFNGNWLRWIFMSYVFITIIDCYYRPGF 132

Query: 148 YCERKFPDNY---VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
               +   +Y    + I G + G+++  LGVGG + T  L+   G+S+ +A A
Sbjct: 133 MVTSRQKQHYGQNSELIKGGIIGWVAALLGVGGSVMTVPLLRRRGSSMAEAAA 185


>gi|118594433|ref|ZP_01551780.1| Predicted permease [Methylophilales bacterium HTCC2181]
 gi|118440211|gb|EAV46838.1| Predicted permease [Methylophilales bacterium HTCC2181]
          Length = 263

 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 13/224 (5%)

Query: 48  MVPVLSKA---FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWI 104
           +VPVL+ +   F  + ++ +I   +A+ T+L  +  T  ++   H+++  I++ I+K ++
Sbjct: 28  IVPVLTYSLIFFSKIPLEQAIL--IAISTALASMVMTGAVAVYAHKKNNNISLTIIKRFL 85

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM 164
             L + +++    I  +   +L   F I+       M    RL      P      I G 
Sbjct: 86  VGLILGSLIVGFSIDLIPGDYLRSGFIIYVFFTAYRMFVDRRLTNRPSLPSFMKANIIGF 145

Query: 165 VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA-FPALLVRIYS-GWGLN 222
               +SG LG+GGG      ++        A  TS+     I  F ++ V I S  + LN
Sbjct: 146 FFALISGVLGIGGGTLFTPYLIKRDVPSKLAIGTSSAFGFFIGLFTSITVFINSTSFELN 205

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLAT----KLSYMIGKKY 262
            LP   +G+V + A+L +   S+L   ++     KLS    KK+
Sbjct: 206 SLP--LIGYVYVPAILFLTLPSLLFVKISAGWLIKLSDDCAKKW 247


>gi|147677574|ref|YP_001211789.1| permease [Pelotomaculum thermopropionicum SI]
 gi|146273671|dbj|BAF59420.1| predicted permease [Pelotomaculum thermopropionicum SI]
          Length = 254

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 58/134 (43%), Gaps = 9/134 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++V    +G LSG+ GVGGG +MVP        M +      H A G+SL  + P  
Sbjct: 129 IAALLVTGVFTGFLSGMMGVGGGTIMVPS-------MVLLTGFTQHTAQGSSLLAMIPAG 181

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               + H R G +N  IL   I  + I T + S +   + +  L   FA   +  GI  L
Sbjct: 182 GAGALTHWRLGNVNAAILPGLISGILIGTFLGSNLAHFISEGNLRVIFAAVLVWTGIKYL 241

Query: 143 KRDRLYCERKFPDN 156
           K       R  P+N
Sbjct: 242 KTPAPKLLR--PEN 253



 Score = 42.0 bits (97), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 26/235 (11%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++MVP++    +          H A GTSL  +  T +     +   G++++        
Sbjct: 22  IIMVPLMVALLK-------TGQHKAHGTSLIALVFTGIAGAATYALRGSVDILAAALLAS 74

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK----YI 161
               T    +   + + +  L K+F  F +L+ +L+L +  L         ++K     +
Sbjct: 75  TAVFTARAGARYANALPEWKLKKSFGAFMILVTVLLLLKPSLSQIANPFTGWLKIAALLV 134

Query: 162 WGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G+ TGFLSG +GVGGG I    ++L  G + + A  +S           LL  I +G G
Sbjct: 135 TGVFTGFLSGMMGVGGGTIMVPSMVLLTGFTQHTAQGSS-----------LLAMIPAG-G 182

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILI-TPLATKLSYMIGKKYLTIGFSMIMFTT 274
              L  W LG VN  A+L  L   ILI T L + L++ I +  L + F+ ++  T
Sbjct: 183 AGALTHWRLGNVN-AAILPGLISGILIGTFLGSNLAHFISEGNLRVIFAAVLVWT 236


>gi|229491052|ref|ZP_04384883.1| integral membrane protein [Rhodococcus erythropolis SK121]
 gi|229322033|gb|EEN87823.1| integral membrane protein [Rhodococcus erythropolis SK121]
          Length = 284

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 6/185 (3%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSI-CMHVAMGTSLGV 77
           V+ Y  +++    L+G  + LFG GGG V VPV+  A  L    D I  MHVA+ +S  V
Sbjct: 18  VLHYSLILLAFGALTGVATVLFGFGGGFVTVPVVYAASTLR--PDVIDPMHVAVASSAAV 75

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +   S+ + +  R+ G +  + ++  I  + +   + ++   HVD   +   F ++ L+ 
Sbjct: 76  MVVNSLGATVAFRKSGRLRTEYIRPLIGPVALGAGLGAVAAGHVDDGVVRILFVLYLLVT 135

Query: 138 GILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            +  L R         R+  D +     G+  G ++  LGVGG + T  +M   G  +  
Sbjct: 136 ILDSLLRQGFLTPPEPREHLDRHGVRAVGIGIGAVASFLGVGGSVMTVPMMRRGGVPMAD 195

Query: 195 ATATS 199
           A A++
Sbjct: 196 AAASA 200


>gi|52550366|gb|AAU84215.1| permease [uncultured archaeon GZfos3D4]
          Length = 275

 Score = 48.9 bits (115), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 6/192 (3%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M PV    +  MG+   + + V +GTS+ V+ PT++     H + G +  K        
Sbjct: 31  IMTPVQYWVYIAMGVPLDVAIKVVLGTSMFVLLPTAISGAYGHLKKGAVWWKAGIVLGVA 90

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKY-IWG 163
                ++ + + +H+  + L   F +  L  G+ ML  K   +  E K  D+ + + IWG
Sbjct: 91  EAFGALIGATIAAHLPGNVLCVTFGLAILAGGVQMLIAKPPAIMNEPK--DSPLLWVIWG 148

Query: 164 MVTGFLSGALGVGGGI-FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
              G ++G +G GGG+    +++L     +++A  T   +    +    +  + +G G+ 
Sbjct: 149 FPIGIVAGIVGTGGGVMMIPVMVLVLKFRMHQAVGTMTALMIFASIGGTIGYLINGLGVI 208

Query: 223 GLPPWSLGFVNI 234
           GLP  S+G+VN+
Sbjct: 209 GLPVHSIGYVNL 220


>gi|332308166|ref|YP_004436017.1| hypothetical protein Glaag_3822 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332175495|gb|AEE24749.1| protein of unknown function DUF81 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 266

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 1/200 (0%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           ++ M +A+ TSL  I  T++ S   H + G +    L      + I  ++     + +  
Sbjct: 50  TVAMPMAIATSLSTIVLTAISSSRAHYKLGNLRTFYLLWTGIGISIGAIIGPQFATLISA 109

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
             L   FA+  +++   M+       +R    + +  I G++TG +S  +G+GGG     
Sbjct: 110 QSLKTLFAVLVMVIAAQMVFLGNKNAKRDVTQSLLLVI-GVITGCISSIMGIGGGAIMVP 168

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
            +L+    +  A   +A    +IA       I +GW    LP W+LG++ + A L I+  
Sbjct: 169 ALLWCRVDMRAAIGCAAFSGLVIALFGSASFIVAGWNNTHLPEWALGYIYLPATLGIVMT 228

Query: 244 SILITPLATKLSYMIGKKYL 263
           S+    +  KLS  +  + L
Sbjct: 229 SVFTASIGAKLSRTLNTQLL 248


>gi|222446019|ref|ZP_03608534.1| hypothetical protein METSMIALI_01668 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435584|gb|EEE42749.1| hypothetical protein METSMIALI_01668 [Methanobrevibacter smithii
           DSM 2375]
          Length = 270

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 119/239 (49%), Gaps = 20/239 (8%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP      + +G+D S+ M +++GTSL +I PT+        RH  +   ILK  I  L
Sbjct: 33  IVPFQYFLLEYLGVDPSLAMMISLGTSLAIIIPTATSG---ASRHLKVMDNILKPGI-RL 88

Query: 108 PITTVVTS----LMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY--- 160
            +  +V S    L+ S +    L   F   CLL+ I +  R+ +  ++K      K+   
Sbjct: 89  GLFGIVGSMLGGLIASMLPTQILKIIFG--CLLLFIAI--RNLMSADKKTSKARAKFNLI 144

Query: 161 ---IWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIY 216
              + G++ G  SG LGVGGG+F  L++   +G S+ +A   S+   +L A    +  I 
Sbjct: 145 NIAVVGVLVGISSGLLGVGGGVFIILILTAIFGFSMIEAIGISSVFISLTAIGGTVSYII 204

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           SGWG+N   P+SLG+V++    +I   S+ +     K+++ + +K L   F +++   S
Sbjct: 205 SGWGVNPF-PYSLGYVSLVNFAVIAMFSVPLAYYGAKIAHKVPEKRLKQIFGLVVLYIS 262


>gi|89075631|ref|ZP_01162032.1| putative membrane protein [Photobacterium sp. SKA34]
 gi|89048638|gb|EAR54211.1| putative membrane protein [Photobacterium sp. SKA34]
          Length = 269

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 10/214 (4%)

Query: 47  VMVPVLSK---AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDW 103
           V+VP+LS     F ++  +  +   VA+ TSL  I  TS  S + H ++G +    L  W
Sbjct: 31  VIVPILSVILLHFAILPPEQVVI--VAIATSLASILFTSTSSAIAHHKNGNVPWN-LAPW 87

Query: 104 IFV-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML---KRDRLYCERKFPDNYVK 159
           I   + +   ++  + + +  + +   FA+   L+   M     +      R  P+N+V 
Sbjct: 88  IMTGVALGAFISGFLAALLPGNVVRIIFAVSVALIAFKMFYSSTKKETATTRNMPNNFVL 147

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
                +TG LS  +G+GGG+    L+ F+   + KA   ++    +IA    +  + SG 
Sbjct: 148 TFLTTITGGLSAMIGIGGGVLLVPLLTFFSLDMKKAIGCASACGIVIALFGSIGYVSSGI 207

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
               +     GFV + A++ I+  S    PL  K
Sbjct: 208 SYLSITDGFAGFVYLPALVGIVCTSWFTAPLGAK 241


>gi|332969423|gb|EGK08447.1| protein of hypothetical function DUF81 [Desmospora sp. 8437]
          Length = 273

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 37/205 (18%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L +V   +SGT+  + G+GGG++ VP L      +   + I   +A+GTSL ++  T+
Sbjct: 5   LILFLVIGLVSGTVGTIVGLGGGIITVPALLFLASHLSEAEHITPQMAVGTSLVLVIITA 64

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA--IFCLLMGIL 140
           + S + + R   ++      W       ++        +  ++L + FA  +F ++ G+L
Sbjct: 65  LSSTLSYARQQRVDFS--SGW-------SLFWGSGPGAILGAWLTRYFAGSLFFIVFGVL 115

Query: 141 ML--------------KRDRLYCERKFPD---NYVKYIW--------GMVTGFLSGALGV 175
           M+              +R +   +R+F D   N  +Y +        G V G LSG  G+
Sbjct: 116 MIGIALLLTLGDRLKVRRVKWSVQREFKDAEGNIYRYGYHRTIALTCGFVVGLLSGLFGI 175

Query: 176 GGG-IFTNLLMLFYGASIYKATATS 199
           GGG +   L++L +    + ATATS
Sbjct: 176 GGGALLVPLMVLLFRFPPHVATATS 200



 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 13/80 (16%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F+ G LSGLFG+GGG ++VP++   F+          HVA  TS+ VI  +S+   + H 
Sbjct: 164 FVVGLLSGLFGIGGGALLVPLMVLLFRF-------PPHVATATSMFVIFLSSISGSITHL 216

Query: 91  RHGTINMKILKDWIFVLPIT 110
             G I      +W+ VL I 
Sbjct: 217 FQGNI------EWMAVLLIA 230


>gi|197285670|ref|YP_002151542.1| hypothetical protein PMI1813 [Proteus mirabilis HI4320]
 gi|194683157|emb|CAR43769.1| putative membrane protein [Proteus mirabilis HI4320]
          Length = 267

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 7/200 (3%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSI----CMHVAMGTSLGVI 78
           I  +I    +SG  + LFG GGG V VP+L      +   DS+     M +A+ TS  ++
Sbjct: 2   ILWLISFGLISGITTWLFGFGGGFVTVPLLYTLILTLWAGDSLAGEHAMQIAVATSALIM 61

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             +++++ ++H +   I+ K++    + +    +  +L+ S V   ++   F  +  L  
Sbjct: 62  LFSAIITTLKHHKAKKIDWKLIMILFWGIAFGGIFGALLASSVQGEWIRWIFIGYLFLTI 121

Query: 139 ILMLKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +    R      RK      N  + + G + G ++  LGVGG + T  L+   G S+ ++
Sbjct: 122 LDCYFRPGFMAPRKEIQKVTNKKEALTGTIIGIIAAFLGVGGSVMTVPLLRRRGMSMTQS 181

Query: 196 TATSAGVSALIAFPALLVRI 215
            A +  ++  +A  A L  I
Sbjct: 182 AAMANTLTFPLALTATLTYI 201


>gi|284041003|ref|YP_003390933.1| hypothetical protein Slin_6175 [Spirosoma linguale DSM 74]
 gi|283820296|gb|ADB42134.1| protein of unknown function DUF81 [Spirosoma linguale DSM 74]
          Length = 277

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 19/132 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + LI +   L G L+GL G GGG +++P L    +L        M +A+GTSL +IA  +
Sbjct: 159 LPLIALDGVLVGILTGLVGAGGGFLIIPALVLMVRL-------PMKMAVGTSLLIIAANT 211

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVT------SLMISHVDKSFLNKAFAIFCLL 136
           ++ F       T N+ I  +W F++  TT+        S +   +    L K F  F L+
Sbjct: 212 LIGFWG----STANLNI--NWPFLIKFTTLSVIGIMAGSFLTRFIPSQSLKKGFGYFVLV 265

Query: 137 MGILMLKRDRLY 148
           MGI ++ R+ ++
Sbjct: 266 MGIYIIARETVF 277


>gi|158320809|ref|YP_001513316.1| permease [Alkaliphilus oremlandii OhILAs]
 gi|158141008|gb|ABW19320.1| permease [Alkaliphilus oremlandii OhILAs]
          Length = 120

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 7/123 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V +   II+  F SG ++GLFG GGG + V  L+  F       S+  H A  T++ +I 
Sbjct: 4   VSHFTFIILIGFTSGIVNGLFGAGGGTIAVLALTLIF-------SVSQHKAQATAISIIL 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           P S++S   + R G   M+          I + + S +++ + +++L K F  F ++  +
Sbjct: 57  PLSLISGFIYYRSGFTTMETTVKVAIGGVIGSYIGSNLLNKIPENYLRKIFGAFIIVSAL 116

Query: 140 LML 142
            M+
Sbjct: 117 RMV 119


>gi|327404988|ref|YP_004345826.1| hypothetical protein Fluta_3009 [Fluviicola taffensis DSM 16823]
 gi|327320496|gb|AEA44988.1| protein of unknown function DUF81 [Fluviicola taffensis DSM 16823]
          Length = 268

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 20/138 (14%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +Y  +++   F+ GT++GL G GGG +++P L    +L        +  A+GTSL +I+ 
Sbjct: 145 NYFQILLQGVFI-GTITGLIGAGGGFLIIPALVNLLKL-------PIRTAVGTSLVIISI 196

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTV------VTSLMISHVDKSFLNKAFAIFC 134
            S+M F+    H ++       W F+L I  +      + S + + +  + L   F  F 
Sbjct: 197 NSLMGFLFSLSHTSV------QWGFLLSIAAIAIVGILIGSYLSTLIKATKLKPIFGWFV 250

Query: 135 LLMGILMLKRDRLYCERK 152
           L+MG+ +L ++ L+  + 
Sbjct: 251 LIMGLYILLKETLFTLKS 268


>gi|188587473|ref|YP_001919018.1| permease [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179352160|gb|ACB86430.1| permease [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 117

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 62/114 (54%), Gaps = 7/114 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++V   ++G+++GL GVGGG  ++P L+   +L         H+A GT++ VI PT++ S
Sbjct: 6   LVVIGLITGSINGLLGVGGGTFLIPALTHVKKLK-------QHIAHGTTISVILPTALAS 58

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              +  H  ++  +    I    + + + + +++ ++  FL + FA F ++ GI
Sbjct: 59  AAIYGFHDRVDYLLALKVIASGALGSFLGAKLMNFLNPDFLKRIFATFIIITGI 112


>gi|228922380|ref|ZP_04085686.1| hypothetical protein bthur0011_33690 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228837255|gb|EEM82590.1| hypothetical protein bthur0011_33690 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 245

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 106/225 (47%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV----TSLMISH 120
           I +HVA+ TSL  +A T++   + H R G + + I         I + +     SL+ +H
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 88

Query: 121 VDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKFPDNY-VKYI-WGMVTGFLSGAL 173
           +   F        AIF  +  I+   +++  LY  ++FP NY +K I  G+VTG ++G+ 
Sbjct: 89  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKEFPVNYLLKCICLGLVTGMMAGSF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I +    S G + L+  P     I  G G        LG+ 
Sbjct: 149 GIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----IAIGGG--------LGYS 191

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           + G +  IL + +LI    T L   IG K+      + + FSMIM
Sbjct: 192 SEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRMLLRFSMIM 233


>gi|330448520|ref|ZP_08312168.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328492711|dbj|GAA06665.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 269

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 12/218 (5%)

Query: 47  VMVPVLS---KAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDW 103
           V+VP+LS     F ++  D  +   VA+ TSL  I  TS  S + H ++G +  + L  W
Sbjct: 31  VIVPILSIILLHFTILPPDQVVI--VAIATSLASILFTSTSSAIAHHKNGNVPWE-LAPW 87

Query: 104 IFV-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML----KRDRLYCERKFPDNYV 158
           I   + +  +++  + + +  + +   FA+   L+ + M     ++D     R  P+N V
Sbjct: 88  IMTGVALGALISGFLAALLPANVVRMVFAVSVALIALKMFYSSTQKDNAK-TRNMPNNVV 146

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
                 + G LS  +G+GGG     L+ F+   + KA   ++    +IA    +  I SG
Sbjct: 147 LTFLTTIMGGLSAMIGIGGGALLVPLLTFFSLDMKKAIGCASACGIVIALFGSIGYITSG 206

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
                +     GFV + A+  I+  S    PL  K ++
Sbjct: 207 SSYLSISDGFAGFVYLPALFGIVCTSWFTAPLGAKATH 244


>gi|227356176|ref|ZP_03840565.1| integral membrane protein [Proteus mirabilis ATCC 29906]
 gi|227163640|gb|EEI48556.1| integral membrane protein [Proteus mirabilis ATCC 29906]
          Length = 267

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 7/200 (3%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSI----CMHVAMGTSLGVI 78
           I  +I    +SG  + LFG GGG V VP+L      +   DS+     M +A+ TS  ++
Sbjct: 2   ILWLISFGLISGITTWLFGFGGGFVTVPLLYTLILTLWAGDSLAGEHAMQIAVATSALIM 61

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             +++++ ++H +   I+ K++    + +    +  +L+ S V   ++   F  +  L  
Sbjct: 62  LFSAIITTLKHHKAKKIDWKLIMILFWGIAFGGIFGALLASTVQGEWIRWIFIGYLFLTI 121

Query: 139 ILMLKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +    R      RK      N  + + G + G ++  LGVGG + T  L+   G S+ ++
Sbjct: 122 LDCYFRPGFMAPRKEIQKVTNKKEALTGTIIGIIAAFLGVGGSVMTVPLLRRRGMSMTQS 181

Query: 196 TATSAGVSALIAFPALLVRI 215
            A +  ++  +A  A L  I
Sbjct: 182 AAMANTLTFPLALTATLTYI 201


>gi|325122306|gb|ADY81829.1| hypothetical protein BDGL_001243 [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 267

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 85/175 (48%), Gaps = 7/175 (4%)

Query: 32  LSGTLSGLFGVGGGLVMVPVL-SKAFQLMGIDDSICMH---VAMGTSLGVIAPTSVMSFM 87
           LSG  + LFG GGG V VP+L +   Q    + ++ +H   +A+ TS  V+  ++  +  
Sbjct: 11  LSGITTWLFGFGGGFVAVPLLYTVIIQKWSNESNVGIHAMQIAVATSAFVMLCSASFATF 70

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            H + G I+ + ++     + +  +V +LM S  + ++L   F  +  +  I    R   
Sbjct: 71  RHHQSGHIDWQKIRFLGGGIALGGIVGALMASLFNGNWLRWIFMGYVFITIIDCYYRPGF 130

Query: 148 Y---CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
                +R+      + I G V G+++  LGVGG + T  L+   G+S+ +A A +
Sbjct: 131 MVTSVQRQHDGQNSELIKGGVIGWVAALLGVGGSVMTVPLLRRRGSSMAEAAAIA 185


>gi|297566927|ref|YP_003685899.1| hypothetical protein Mesil_2541 [Meiothermus silvanus DSM 9946]
 gi|296851376|gb|ADH64391.1| protein of unknown function DUF81 [Meiothermus silvanus DSM 9946]
          Length = 258

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 7/103 (6%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A  L+G  SGL GVGGG ++VP+L     L G++     HVA GTSL  + P++++    
Sbjct: 138 AGVLAGFASGLLGVGGGTIIVPIL---VLLAGLEQ----HVAQGTSLLAMIPSALVGSYT 190

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
           H +HG +  +++   +  +        L+ + + + +L   FA
Sbjct: 191 HYKHGNLAQEVVAGLVIGIIGGAFAGGLVANQLPEFWLRVIFA 233


>gi|110597797|ref|ZP_01386080.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
 gi|110340522|gb|EAT59005.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
          Length = 121

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 19/129 (14%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIA 79
             + L+ + +F +G LSG+FGVGGG+++VP +   F        +    A+GTSL  ++ 
Sbjct: 2   QLVALLAIGTF-AGLLSGMFGVGGGVIIVPAMVLLF-------GMTQQSAVGTSLIALLL 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT-----SLMISHVDKSFLNKAFAIFC 134
           P  V+  +E+ R G I+ +    WI ++    +       + + + +    L KAFAIF 
Sbjct: 54  PVGVLGVIEYYRAGKISAE--NIWIGLIVAAGLFAGAFFGAKIAAQMPGDILRKAFAIF- 110

Query: 135 LLMGILMLK 143
             MGI+ L+
Sbjct: 111 --MGIVALQ 117


>gi|242398129|ref|YP_002993553.1| Predicted permease [Thermococcus sibiricus MM 739]
 gi|242264522|gb|ACS89204.1| Predicted permease [Thermococcus sibiricus MM 739]
          Length = 254

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 27/244 (11%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G L+ LFG+GGG ++VP L+    L+G++    +H A+GTS   +  TS+ S + + R  
Sbjct: 15  GILAALFGLGGGFLVVPTLN----LLGVE----IHHAVGTSSAAVVFTSLSSAIAYHRQR 66

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
            I+ K          I   + + M S++  S L   F +   L+ I  + R +     + 
Sbjct: 67  RIHYKAGLLLASTAVIGAYIGAWMTSYISASQLKVIFGVVLFLVAI-RIYRKKSREPHEV 125

Query: 154 PDNYVKYIWGMVT--GFLSG---ALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIA 207
             N VK  + +V   GF++G    L   GG   N+  L Y G  I+ A ATS   S  I 
Sbjct: 126 DLNQVKLDYKIVPIGGFIAGIASGLLGIGGGAINVPFLTYMGLPIHYAVATS---SFAIV 182

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F A+     SG     L  + LG V +  +++++P  I+   L  K++       LT  F
Sbjct: 183 FTAI-----SG----ALKHYMLGNVEVEWLILLVPGLIVGAQLGAKIAKRTKASNLTKAF 233

Query: 268 SMIM 271
           ++IM
Sbjct: 234 AVIM 237


>gi|121999111|ref|YP_001003898.1| hypothetical protein Hhal_2333 [Halorhodospira halophila SL1]
 gi|121590516|gb|ABM63096.1| protein of unknown function DUF81 [Halorhodospira halophila SL1]
          Length = 288

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 81/177 (45%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
           F  +  D ++  H+A+GTSL  +  TS+ S   H +   +++ +       +    V+ +
Sbjct: 63  FAALDFDAAVATHLAIGTSLATVVVTSLGSARSHYQLSAVDVPLFLRLAAGMVGGAVLGT 122

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGV 175
           ++  ++D + L + F  F LL+ + ML   +           V    G   G LS  +GV
Sbjct: 123 VLAGYLDGAALQRLFGSFLLLVSLYMLSGWQPPRRGGGGGTGVLAGVGGGIGTLSAMVGV 182

Query: 176 GGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
            GG  T   +++ G ++++A  TS+  +  +     L  +  GWG   LP  + G++
Sbjct: 183 SGGTVTVPYLVWRGVAMHRAVGTSSATALPLGLTGALGYLMVGWGHPQLPSGATGYI 239


>gi|239502524|ref|ZP_04661834.1| hypothetical protein AbauAB_09447 [Acinetobacter baumannii AB900]
          Length = 269

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMH---VAMGTSLGVIAPTSVMSFM 87
           LSG  + LFG GGG V VP+L     Q    + +I +H   +A+ TS  V+  ++  +  
Sbjct: 11  LSGITTWLFGFGGGFVAVPLLYTVIIQKWSNESNIGIHAMQIAVATSAFVMLCSASFAIF 70

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            H R G I+ + ++     + +  +V ++M S  + ++L   F  +  +  +    R   
Sbjct: 71  RHYRSGHIDWQKIRFLWGGIALGGIVGAVMASLFNGNWLRWIFMGYVFITILDCYYRPGF 130

Query: 148 YCERKFPDNYVK---YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
               +   +Y +    I G + G+++  LGVGG + T  L+   G+S+ +A A +
Sbjct: 131 IVTSRQKQHYSQNSELIKGGIIGWVAALLGVGGSVMTVPLLRRRGSSMAEAAAIA 185


>gi|332521553|ref|ZP_08398007.1| protein of unknown function DUF81 [Lacinutrix algicola 5H-3-7-4]
 gi|332042952|gb|EGI79151.1| protein of unknown function DUF81 [Lacinutrix algicola 5H-3-7-4]
          Length = 268

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 19/138 (13%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           ++K    +Y  LI++     G L+GL G GGG +++P L        I   + M VA+ T
Sbjct: 139 VNKKVKYNY-PLILIEGLFVGALTGLIGAGGGFLIIPALV-------ILAKVKMKVAIAT 190

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV------VTSLMISHVDKSFLN 127
           SL +IA  S++ F        I M +  +W F++  TT+      + S + + VD   L 
Sbjct: 191 SLIIIAAKSLLGFF---LGDAITMNV--NWSFLILFTTISLIGIFLGSYLSNFVDGKKLK 245

Query: 128 KAFAIFCLLMGILMLKRD 145
           K F  F  LM I +   +
Sbjct: 246 KGFGYFIFLMAIFIFYME 263


>gi|21281783|ref|NP_644869.1| hypothetical protein MW0054 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49484959|ref|YP_042180.1| hypothetical protein SAS0054 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297209419|ref|ZP_06925817.1| hypothetical membrane Spanning protein [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300911418|ref|ZP_07128867.1| hypothetical membrane Spanning protein [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|21203218|dbj|BAB93919.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49243402|emb|CAG41822.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|296885880|gb|EFH24815.1| hypothetical membrane Spanning protein [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300887597|gb|EFK82793.1| hypothetical membrane Spanning protein [Staphylococcus aureus
           subsp. aureus TCH70]
          Length = 251

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/238 (21%), Positives = 115/238 (48%), Gaps = 15/238 (6%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +V+ + ++++  F  G +SGL GVGG +++ P +     L G   +   ++A G +   +
Sbjct: 3   IVNIVIMLLIGVF-GGFISGLVGVGGAIIIYPAILLLPPLFG-APAYSAYIASGLTSSQV 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             +++   ++ R+    + +++      + I +++ + + +  D +F+N  + I  LL  
Sbjct: 61  FFSTLSGSLKARKKTEFSPQLVLYMGGGMIIGSMLGAFLANLFDATFVNTVYIIIALLAL 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATA 197
            LM  + +   E+   + Y+  I G+  G +SG +G GG  I   +L++ +   +    A
Sbjct: 121 TLMFIKVKPSSEKSSFNKYLLVIIGLFIGIISGIVGAGGAFIIIPILLVLFKLPMNTVVA 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            S  ++ + +  A ++++  G+    +P +   F+ IG        SI+  P+  KLS
Sbjct: 181 NSIVIAFISSIGAFVIKLIQGY----IPLYDALFLIIG--------SIIFAPIGLKLS 226


>gi|218236098|ref|YP_002368485.1| permease [Bacillus cereus B4264]
 gi|218164055|gb|ACK64047.1| permease [Bacillus cereus B4264]
          Length = 251

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 106/225 (47%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV----TSLMISH 120
           I +HVA+ TSL  +A T++   + H R G + + I         I + +     SL+ +H
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 94

Query: 121 VDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKFPDNY-VKYIW-GMVTGFLSGAL 173
           +   F        AIF  +  I+   +++  LY  +KF  NY +K I+ G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKKFSMNYLLKCIYLGLVTGMMAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I +    S G + L+  P     I  G G        LG+ 
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----IAIGGG--------LGYS 197

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           + G +  IL + +LI    T L   IG K+      + + FSMIM
Sbjct: 198 SEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRMLLRFSMIM 239


>gi|323706508|ref|ZP_08118067.1| protein of unknown function DUF81 [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323534138|gb|EGB23930.1| protein of unknown function DUF81 [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 119

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 20/110 (18%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            Y+ LI++  F++G L+GLFG GGG ++VP +     L+GI+D    H A  T++ +I P
Sbjct: 3   RYVKLILIG-FMTGVLNGLFGAGGGTIIVPFM---VFLLGIED----HKAHATAISIILP 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT--SLMISHVDKSFLNK 128
            ++ S + +          +K  IF LPIT  VT  S++   +  S LNK
Sbjct: 55  LTIFSSIIY----------IKSGIFNLPITLNVTLGSVVGGLLGASILNK 94


>gi|307720983|ref|YP_003892123.1| hypothetical protein Saut_1062 [Sulfurimonas autotrophica DSM
           16294]
 gi|306979076|gb|ADN09111.1| protein of unknown function DUF81 [Sulfurimonas autotrophica DSM
           16294]
          Length = 243

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 23/172 (13%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G LSGLFG+GGG ++VP+L     ++G +  I    A+G S+  +  +S+     + + G
Sbjct: 12  GLLSGLFGIGGGTILVPLL----LILGYETKI----AIGISVVQMVFSSIYGSYLNNKKG 63

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK-------AFAIFCLLMGILMLKRDR 146
           T+++ +    + ++ +     +L+   +  SF +K        FA F LL  + M   D 
Sbjct: 64  TLDVVM----VVIIGLGGFCGALLSGSITSSFSDKTLEMVFFTFATFALLR-LFMKTHD- 117

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATA 197
            Y   K  +  V ++ G VTG +S A+GVGG  I   +L+ F    + KAT+
Sbjct: 118 -YKHEKKINKAVLFVIGFVTGAISMAIGVGGSLILVPILVGFLHVPLKKATS 168


>gi|325959155|ref|YP_004290621.1| hypothetical protein Metbo_1410 [Methanobacterium sp. AL-21]
 gi|325330587|gb|ADZ09649.1| protein of unknown function DUF81 [Methanobacterium sp. AL-21]
          Length = 263

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 14/127 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +   VA+ TSL  + PTSV+S + H R G ++++          + T+V +++ + +   
Sbjct: 41  VTPQVAIATSLASVLPTSVVSSISHFREGNVDIRTGLILGIGGVVGTLVGAVIANLIPPV 100

Query: 125 FLNKAFAIFCLLMGILMLK--------------RDRLYCERKFPDNYVKYIWGMVTGFLS 170
            L K   IF L+M I ML+               ++     K P   V  ++G+ +G L+
Sbjct: 101 LLEKIMGIFTLIMLIPMLRSLVQRQQKMKELNGENQEKTTLKGPKRAVASLFGVASGLLA 160

Query: 171 GALGVGG 177
           G  G+ G
Sbjct: 161 GVFGISG 167


>gi|15923074|ref|NP_370608.1| hypothetical protein SAV0084 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15925788|ref|NP_373321.1| hypothetical protein SA0080 [Staphylococcus aureus subsp. aureus
           N315]
 gi|57652425|ref|YP_184966.1| hypothetical protein SACOL0061 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87160645|ref|YP_492801.1| hypothetical protein SAUSA300_0083 [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88193854|ref|YP_498639.1| hypothetical protein SAOUHSC_00033 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148266513|ref|YP_001245456.1| hypothetical protein SaurJH9_0071 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150392549|ref|YP_001315224.1| hypothetical protein SaurJH1_0073 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|151220238|ref|YP_001331061.1| hypothetical protein NWMN_0026 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156978414|ref|YP_001440673.1| hypothetical protein SAHV_0083 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161508349|ref|YP_001574008.1| hypothetical protein USA300HOU_0090 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253315723|ref|ZP_04838936.1| hypothetical protein SauraC_06186 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|254664012|ref|ZP_05143484.1| hypothetical protein SauraM_00400 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257794436|ref|ZP_05643415.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|258407602|ref|ZP_05680738.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|258419878|ref|ZP_05682840.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|258438607|ref|ZP_05689830.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|258443937|ref|ZP_05692275.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|258445136|ref|ZP_05693373.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|258447741|ref|ZP_05695880.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|258452228|ref|ZP_05700242.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|258455636|ref|ZP_05703591.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|262049455|ref|ZP_06022327.1| hypothetical protein SAD30_1382 [Staphylococcus aureus D30]
 gi|262051900|ref|ZP_06024115.1| hypothetical protein SA930_0854 [Staphylococcus aureus 930918-3]
 gi|269201718|ref|YP_003280987.1| hypothetical protein SAAV_0032 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282894306|ref|ZP_06302536.1| conserved hypothetical protein [Staphylococcus aureus A8117]
 gi|282927920|ref|ZP_06335530.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|282928336|ref|ZP_06335939.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|284023091|ref|ZP_06377489.1| hypothetical protein Saura13_00749 [Staphylococcus aureus subsp.
           aureus 132]
 gi|294850436|ref|ZP_06791167.1| hypothetical protein SKAG_02526 [Staphylococcus aureus A9754]
 gi|295405356|ref|ZP_06815166.1| hypothetical protein SMAG_00507 [Staphylococcus aureus A8819]
 gi|296277103|ref|ZP_06859610.1| hypothetical protein SauraMR_12181 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297244692|ref|ZP_06928572.1| hypothetical protein SLAG_00780 [Staphylococcus aureus A8796]
 gi|5360802|dbj|BAA82172.1| unnamed protein product [Staphylococcus aureus]
 gi|6332751|dbj|BAA86633.1| hypothetical protein [Staphylococcus aureus]
 gi|13700000|dbj|BAB41299.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14245851|dbj|BAB56246.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|57286611|gb|AAW38705.1| conserved domain protein [Staphylococcus aureus subsp. aureus COL]
 gi|87126619|gb|ABD21133.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201412|gb|ABD29222.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147739582|gb|ABQ47880.1| protein of unknown function DUF81 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149945001|gb|ABR50937.1| protein of unknown function DUF81 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|150373038|dbj|BAF66298.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156720549|dbj|BAF76966.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160367158|gb|ABX28129.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257788408|gb|EEV26748.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|257840827|gb|EEV65284.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|257844160|gb|EEV68547.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|257848166|gb|EEV72158.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|257850821|gb|EEV74765.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|257856044|gb|EEV78963.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|257859023|gb|EEV81887.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|257860065|gb|EEV82899.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|257861848|gb|EEV84621.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|259160227|gb|EEW45256.1| hypothetical protein SA930_0854 [Staphylococcus aureus 930918-3]
 gi|259162452|gb|EEW47022.1| hypothetical protein SAD30_1382 [Staphylococcus aureus D30]
 gi|262074008|gb|ACY09981.1| hypothetical protein SAAV_0032 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282589920|gb|EFB95003.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|282592010|gb|EFB97040.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|282763351|gb|EFC03481.1| conserved hypothetical protein [Staphylococcus aureus A8117]
 gi|285815809|gb|ADC36296.1| Protein of unknown function DUF81 [Staphylococcus aureus 04-02981]
 gi|294822706|gb|EFG39144.1| hypothetical protein SKAG_02526 [Staphylococcus aureus A9754]
 gi|294969431|gb|EFG45450.1| hypothetical protein SMAG_00507 [Staphylococcus aureus A8819]
 gi|297178209|gb|EFH37456.1| hypothetical protein SLAG_00780 [Staphylococcus aureus A8796]
 gi|312828603|emb|CBX33445.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315129063|gb|EFT85059.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315196071|gb|EFU26430.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320139484|gb|EFW31355.1| conserved domain protein [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320142114|gb|EFW33934.1| conserved domain protein [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329731849|gb|EGG68209.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           21189]
          Length = 251

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/238 (21%), Positives = 115/238 (48%), Gaps = 15/238 (6%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +V+ + ++++  F  G +SGL GVGG +++ P +     L G   +   ++A G +   +
Sbjct: 3   IVNIVIMLLIGVF-GGFISGLVGVGGAIIIYPAILLLPPLFG-APAYSAYIASGLTSSQV 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             +++   ++ R+    + +++      + I +++ + + +  D +F+N  + I  LL  
Sbjct: 61  FFSTLSGSLKARKKTEFSPQLVLYMGGGMIIGSMLGAFLANLFDATFVNTVYIIIALLAL 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATA 197
            LM  + +   E+   + Y+  I G+  G +SG +G GG  I   +L++ +   +    A
Sbjct: 121 TLMFIKVKPSSEKSSFNKYLLVIIGLFIGIISGIVGAGGAFIIIPILLVLFKLPMNTVVA 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            S  ++ + +  A ++++  G+    +P +   F+ IG        SI+  P+  KLS
Sbjct: 181 NSIVIAFISSIGAFVIKLIQGY----IPLYDALFLIIG--------SIIFAPIGLKLS 226


>gi|82749805|ref|YP_415546.1| hypothetical protein SAB0028c [Staphylococcus aureus RF122]
 gi|82655336|emb|CAI79716.1| conserved hypothetical protein [Staphylococcus aureus RF122]
          Length = 251

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/238 (21%), Positives = 115/238 (48%), Gaps = 15/238 (6%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +V+ + ++++  F  G +SGL GVGG +++ P +     L G   +   ++A G +   +
Sbjct: 3   IVNIVIMLLIGVF-GGFISGLVGVGGAIIIYPAILLLPPLFG-APAYSAYIASGLTSSQV 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             +++   ++ R+    + +++      + I +++ + + +  D +F+N  + I  LL  
Sbjct: 61  FFSTLSGSLKARKKTEFSPQLVIYMGGGMIIGSMLGAFLANLFDATFVNTVYIIIALLAL 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATA 197
            LM  + +   E+   + Y+  I G+  G +SG +G GG  I   +L++ +   +    A
Sbjct: 121 TLMFIKVKPSSEKSSFNKYLLVIIGLFIGIISGIVGAGGAFIIIPILLVLFKLPMNTVVA 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            S  ++ + +  A ++++  G+    +P +   F+ IG        SI+  P+  KLS
Sbjct: 181 NSIVIAFISSIGAFVIKLIQGY----IPLYDALFLIIG--------SIIFAPIGLKLS 226


>gi|328475699|gb|EGF46445.1| hypothetical protein LM220_02535 [Listeria monocytogenes 220]
          Length = 176

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 94/171 (54%), Gaps = 20/171 (11%)

Query: 109 ITTVVTSLMISHVDKSFLNKAF-----AIFCLLMGILMLKRDRLYCERKFPDNY--VKYI 161
           +T++ T+ + + V++      +     A+  +L+GI++ K+ R   +  F   Y  + Y+
Sbjct: 7   VTSIPTTFLGAMVNQMLPEAVYRFLYGALIVVLLGIMIWKKKRHNEKPHFLSEYRIIPYV 66

Query: 162 WGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
           +G++ GFL+G  G+GGG I   +L+L +  +   A+ATS+ V+ L +  ++       + 
Sbjct: 67  FGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQKTASATSSYVTLLTSLASI-----GSYA 121

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           + G   +S+G       + ++P +I+   + T+L+ ++ +K++ I F++++
Sbjct: 122 IIGGSDFSIG-------IYMIPGAIIGALIGTRLNKLLDEKWIAILFNVLL 165


>gi|260554946|ref|ZP_05827167.1| permease [Acinetobacter baumannii ATCC 19606]
 gi|260411488|gb|EEX04785.1| permease [Acinetobacter baumannii ATCC 19606]
          Length = 272

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 19/181 (10%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMH---VAMGTSLGVIAPTSVMSFM 87
           LSG  + LFG GGG V VP+L     Q    + +I +H   +A+ TS  V+  ++  +  
Sbjct: 16  LSGITTWLFGFGGGFVAVPLLYTVIIQKWSNESNIGIHAMQIAVATSAFVMLCSASFAVF 75

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA--IFCLLMG------- 138
            H R G I+ + ++     + +  +V ++M S  + ++L   F   +F  ++        
Sbjct: 76  RHYRSGHIDWQKIRFLWGGIALGGIVGAVMASLFNGNWLRWIFMGYVFITILDCYYRPGF 135

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           I+ L++ + Y +        + I G + G+++  LGVGG + T  L+   G+S+ +A A 
Sbjct: 136 IVTLRQKQHYGQNS------ELIKGGIIGWVAALLGVGGSVMTVPLLRRRGSSMAEAAAI 189

Query: 199 S 199
           +
Sbjct: 190 A 190


>gi|169633567|ref|YP_001707303.1| hypothetical protein ABSDF1960 [Acinetobacter baumannii SDF]
 gi|169152359|emb|CAP01295.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter baumannii]
          Length = 274

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMH---VAMGTSLGVIAPTSVMSFM 87
           LSG  + LFG GGG V VP+L     Q    + +I +H   +A+ TS  V+  ++  +  
Sbjct: 16  LSGITTWLFGFGGGFVAVPLLYTVIIQKWSNESNIGIHAMQIAVATSAFVMLCSASFAVF 75

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            H R G I+ + ++     + +  +V ++M S  + ++L   F  +  +  +    R   
Sbjct: 76  RHYRSGHIDWQKIRFLWGGIALGGIVGAVMASLFNGNWLRWIFMGYVFITILDCYYRPGF 135

Query: 148 YCERKFPDNY---VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
               +   +Y    + I G + G+++  LGVGG + T  L+   G+S+ +A A +
Sbjct: 136 IVTSRQKQHYGQNSELIKGGIIGWVAALLGVGGSVMTVPLLRRRGSSMAEAAAIA 190


>gi|313624760|gb|EFR94706.1| integral membrane protein, putative [Listeria innocua FSL J1-023]
          Length = 246

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 133/261 (50%), Gaps = 37/261 (14%)

Query: 21  DYICLIIVASFLSGTLSGLF-GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           D I   ++A  LS ++ G F G+GGG++++P+L     LMG+        A  ++L V  
Sbjct: 2   DMITYFLIA--LSTSVVGSFLGIGGGVILLPIL----LLMGVSQGTA---AFSSALTVFT 52

Query: 80  -PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF-----AIF 133
                 S    R+ G + + +       + IT++ T+ + + V++      +     A+ 
Sbjct: 53  MAIFTCSIYYKRKQGNVGLAL------KIAITSIPTTFLGAIVNQMLPESVYRFMYGALI 106

Query: 134 CLLMGILMLKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGA 190
            +L+ +++ K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  
Sbjct: 107 VILLLLMVWKKKRNNEKPHFLSKYRIMPYLFGVIIGFLAGLFGIGGGPIVIPILLLIFML 166

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           S   A+ATS+ V+ L +  ++       + + G   +S+G       + ++P +IL   +
Sbjct: 167 SQKTASATSSYVTLLTSLASI-----GSYAIVGGSDFSIG-------IYMIPGAILGALI 214

Query: 251 ATKLSYMIGKKYLTIGFSMIM 271
            T+L+ ++ +K++ I F++++
Sbjct: 215 GTRLNKLLDEKWIAILFNILL 235


>gi|312129723|ref|YP_003997063.1| hypothetical protein Lbys_0975 [Leadbetterella byssophila DSM
           17132]
 gi|311906269|gb|ADQ16710.1| protein of unknown function DUF81 [Leadbetterella byssophila DSM
           17132]
          Length = 281

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 19/129 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI++   + G L+GL G GGG +++P L        I   + M  A+GTSL +IA  S++
Sbjct: 165 LILIEGTVVGVLTGLVGAGGGFLIIPALV-------ILSKLPMKEAVGTSLVIIAAKSLI 217

Query: 85  SFMEHRRHGTINMKILKDWIFV-----LPITTVVTSLMIS-HVDKSFLNKAFAIFCLLMG 138
            F        I      DW+F+       I  +   + +S  +D S L  AF  F L++G
Sbjct: 218 GFFGESGETVI------DWLFLSKVIAFAIVGIFIGMALSKKIDGSKLKPAFGWFVLVIG 271

Query: 139 ILMLKRDRL 147
           I ++ ++ L
Sbjct: 272 IYIIIKETL 280


>gi|332526721|ref|ZP_08402823.1| hypothetical protein RBXJA2T_12547 [Rubrivivax benzoatilyticus JA2]
 gi|332111124|gb|EGJ11156.1| hypothetical protein RBXJA2T_12547 [Rubrivivax benzoatilyticus JA2]
          Length = 270

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 99/248 (39%), Gaps = 39/248 (15%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           + MVP L+      G++  + + +A+ TS+  I  TS+ S   H RHG +       W +
Sbjct: 31  MTMVPFLTAILSHRGVEAGLAVKMAIATSMATIVFTSLSSMRAHHRHGAVR------WDY 84

Query: 106 VLPITT-VVTSLMISHVDKSFLNKA------FAIFCLLMGILMLKRDRLYCERKFPDNYV 158
           V  I   +V   ++S      L K       FA+F     + ML+  +    R  P    
Sbjct: 85  VRGIAPGIVLGGLVSGAGVFALAKGRGLALFFAVFIGFSALQMLRGKQPRPTRTMPGA-- 142

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNL-------------LMLFYGASIYKATATSAGVSAL 205
                      +G   VG GI                  M +    + +A ATSA +   
Sbjct: 143 -----------AGQAAVGSGIGLVSGLLGAGGGFLSVPFMSWCNVPLRQAIATSAALGFP 191

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           IA   +   + +G  L    P + G++ + A+ I+   S+ + PL  + +  + ++ L  
Sbjct: 192 IALANVAGYLIAGRDLPPALPGAFGYLYLPALAIVSVASVTLAPLGARAAQRMDQRRLRR 251

Query: 266 GFSMIMFT 273
            F++++F 
Sbjct: 252 IFALMLFA 259


>gi|315301830|ref|ZP_07872863.1| integral membrane protein, putative [Listeria ivanovii FSL F6-596]
 gi|313629801|gb|EFR97901.1| integral membrane protein, putative [Listeria ivanovii FSL F6-596]
          Length = 246

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 132/261 (50%), Gaps = 37/261 (14%)

Query: 21  DYICLIIVASFLSGTLSGLF-GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           D I   ++A  LS ++ G F G+GGG++++P+L     LMG+        A  ++L V  
Sbjct: 2   DIITYFLIA--LSTSVIGSFLGIGGGVILLPIL----LLMGVSQGTA---AFSSALTVFT 52

Query: 80  -PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                 S    R+ G + + +       + IT++ T+ + + V++      +     ++ 
Sbjct: 53  MAIFTCSIYYKRKQGDVGLAL------KIAITSIPTTFLGAMVNQMLPETVYRFLYGVLI 106

Query: 139 ILML-----KRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGA 190
           +++L     K+ R   +  F   Y  + +I+G++ GFL+G  G+GGG I   +L+L +  
Sbjct: 107 VVLLLLMVWKKKRHSEQPHFLSKYRIMPFIFGIIIGFLAGLFGIGGGPIVIPILLLIFML 166

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           +   A+ATS+ V+ L +F ++       + + G   +S+G       + ++P +IL   +
Sbjct: 167 NQKTASATSSYVTLLTSFASI-----GSYAIIGGSDFSIG-------IYMIPGAILGALI 214

Query: 251 ATKLSYMIGKKYLTIGFSMIM 271
            T+L+ ++ +K++ I F++++
Sbjct: 215 GTRLNKLLDEKWIAILFNILL 235


>gi|317125404|ref|YP_004099516.1| hypothetical protein Intca_2280 [Intrasporangium calvum DSM 43043]
 gi|315589492|gb|ADU48789.1| protein of unknown function DUF81 [Intrasporangium calvum DSM
           43043]
          Length = 344

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 20/133 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I++  F  G ++GL G GGG ++VP L+    L+G    + M  A+ TSL VI+  S   
Sbjct: 137 ILLDGFAVGLVTGLVGAGGGFLVVPALA----LLG---GLPMGAAVATSLLVISMKSFAG 189

Query: 86  FMEHRRHGTINMKILK-------DWIFVLPIT------TVVTSLMISHVDKSFLNKAFAI 132
           F  +     +N  +++       DW   L +T       +  SL++  +    L KAF  
Sbjct: 190 FAGYALQFGVNGHVVQANPETQIDWAVTLLVTGFAILGALTGSLVVGRIHPDKLRKAFGY 249

Query: 133 FCLLMGILMLKRD 145
           F L+M I ML ++
Sbjct: 250 FVLVMAIFMLSQE 262


>gi|160931518|ref|ZP_02078913.1| hypothetical protein CLOLEP_00350 [Clostridium leptum DSM 753]
 gi|156869389|gb|EDO62761.1| hypothetical protein CLOLEP_00350 [Clostridium leptum DSM 753]
          Length = 118

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 8/117 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V  FLSG ++GL G GGG++ VP+L+K+         +    +  TS+ VI P  V S +
Sbjct: 10  VGGFLSGAVNGLLGAGGGMIAVPMLAKS--------GLEAKKSHATSVAVILPICVFSSI 61

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +   G + +     ++    + +++ S +++ +   +L++ F +  L   + ML R
Sbjct: 62  LYLTDGRVTLGDAAPYLLWGALGSIIGSWLLTKIKDVWLHRIFGVLMLWAAVRMLFR 118


>gi|307324943|ref|ZP_07604148.1| protein of unknown function DUF81 [Streptomyces violaceusniger Tu
           4113]
 gi|306889441|gb|EFN20422.1| protein of unknown function DUF81 [Streptomyces violaceusniger Tu
           4113]
          Length = 270

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 11/218 (5%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGID--DSICMHVAMGTSLGVIAPTSVMSFMEH 89
           L+G  + LFG GGG + VPV+     +      D+  MH+A+ TS  V+   +  + +  
Sbjct: 14  LTGITTVLFGFGGGFITVPVVYGVLTVTASPGRDADAMHIAVATSAAVMVVNAAAAALAQ 73

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL-MGILMLKRDRL- 147
            R G +    +      + +  VV S   + +  + L   FA + L+ +   +L++  L 
Sbjct: 74  WRQGRLRRAYVWPLAAFIAVGAVVGSFAATFIGGTALRLLFAAYLLVTIADSLLRKGFLS 133

Query: 148 --YCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
             +  R  P       + G+  G ++  LGVGG + T  L+   G  + +ATA +  +S 
Sbjct: 134 VAHQTRPEPLGRRTTTLGGIGIGLVAAGLGVGGSVMTVPLLRRRGLPMAEATAMANPLSV 193

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNI--GAVLII 240
            +A    LV  Y+        P  LG+V++  GA L+I
Sbjct: 194 PVALAGTLV--YALAPATSAGPGQLGYVDLTAGAALLI 229


>gi|264679263|ref|YP_003279170.1| permease [Comamonas testosteroni CNB-2]
 gi|262209776|gb|ACY33874.1| putative permease [Comamonas testosteroni CNB-2]
          Length = 302

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 25/191 (13%)

Query: 66  CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI------TTVVTSLMIS 119
            M +A+ TS  V+   ++++   H+R GT+      DW  V P+        V+ +L  +
Sbjct: 82  AMQIAVATSTCVMVFGALLATWRHQRAGTV------DWTNVRPLLGPIGAGAVLGALAAT 135

Query: 120 HVDKSFLNKAFAIF-------CLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGA 172
            V   +L  AFA +       C L    + +  R+   +  P      + G+V G+++  
Sbjct: 136 VVQSEWLRWAFAAYLVLTILDCWLRPGFLAQPSRM---QHRPGPLANALSGLVIGWVAAL 192

Query: 173 LGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP--PWSLG 230
           LGVGG + T  LM   G  + +ATA +  +S  +A       I      + LP   W LG
Sbjct: 193 LGVGGSVMTVPLMRRRGIEMTRATAMANPLSLPVALAGTGTYIVLS-AQSPLPLGEWHLG 251

Query: 231 FVNIGAVLIIL 241
           +++I A  +++
Sbjct: 252 YIDIRAAAVLV 262


>gi|255530512|ref|YP_003090884.1| hypothetical protein Phep_0600 [Pedobacter heparinus DSM 2366]
 gi|255343496|gb|ACU02822.1| protein of unknown function DUF81 [Pedobacter heparinus DSM 2366]
          Length = 278

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 87/182 (47%), Gaps = 32/182 (17%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  +++  +FL+G +  L G+GGG++++P+L+    ++G+D    +H A+G S+  +  T
Sbjct: 6   FTIIVLAGAFLAGLVGSLTGLGGGVIIIPLLT---LVLGVD----IHYAIGASIISVIAT 58

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  S   + + G  N++I         I+ ++ +++   ++ S++   F +  L   ++M
Sbjct: 59  SSGSAAAYVKEGITNIRIGMFLEIATTISAIIGAVVTVFINPSYIAVIFGLILLFSAVMM 118

Query: 142 LKRDRLYCERK--------------FP-DNYVK----------YIWGMVTGFLSGALGVG 176
           +++   + +                +P D  VK          ++   V G +SG LG+G
Sbjct: 119 VRKKVDHSDNDTSGKLAVFLKLNGTYPVDGTVKKYAVHNVLGGFLMMFVAGIISGLLGIG 178

Query: 177 GG 178
            G
Sbjct: 179 SG 180


>gi|254167965|ref|ZP_04874813.1| conserved domain protein, putative [Aciduliprofundum boonei T469]
 gi|289595963|ref|YP_003482659.1| protein of unknown function DUF81 [Aciduliprofundum boonei T469]
 gi|197623008|gb|EDY35575.1| conserved domain protein, putative [Aciduliprofundum boonei T469]
 gi|289533750|gb|ADD08097.1| protein of unknown function DUF81 [Aciduliprofundum boonei T469]
          Length = 254

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 5/153 (3%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           + A+ + L +   +S ++F  +     ++ KI++  + VL   + + +    ++    L 
Sbjct: 49  YFALASPLPMTLISSSIAFKRYHSEKLVDWKIVEKMLVVLIPGSFIGAYATKYISGKILM 108

Query: 128 KAFAIFCLLMGI-LMLKRDRLYCERKFPDN-YVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
              A+F + + I L++  ++   ERK     +V  + G V G LSG L  GGGI    ++
Sbjct: 109 MLTAVFLVYIAIRLIISGNK---ERKMEKRMWVILLVGFVIGLLSGLLANGGGILIVPIL 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           +  G SI KA  +S  +    A P++LV  Y G
Sbjct: 166 VLLGMSIKKAIGSSVAMVLFAAIPSILVHWYLG 198


>gi|254171854|ref|ZP_04878530.1| conserved domain protein, putative [Thermococcus sp. AM4]
 gi|214033750|gb|EEB74576.1| conserved domain protein, putative [Thermococcus sp. AM4]
          Length = 254

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            Y+    V  F+ G L+ LFG+GGG ++VP L     L+G++    MH A+GTS   +  
Sbjct: 3   KYLGYFAVGVFI-GILAALFGLGGGFLIVPTL----NLLGVE----MHHAVGTSSAAVVF 53

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS+ S + + R   I+ K+         I   + + + S +  S L   F +  +++ + 
Sbjct: 54  TSLSSAIAYSRQRRIHYKVGLLLASTAVIGAYIGAWLTSFISASGLKVIFGLALIVVAVR 113

Query: 141 MLKRDRLY-CERKFPDNYVKYIWGMVTGFLSG 171
           + ++      E K  D  V Y    V GF +G
Sbjct: 114 IYRKKTAEPSEVKLEDVRVNYKLVPVGGFFAG 145


>gi|86132622|ref|ZP_01051215.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
 gi|85816864|gb|EAQ38049.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
          Length = 270

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 20/124 (16%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI++   L G ++G+ G GGG +++P L        I  +I M VA+GTSL +IA  S+M
Sbjct: 151 LILIEGLLVGAITGMIGAGGGFLIIPALV-------ILANIKMKVAVGTSLIIIAFKSLM 203

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVT-------SLMISHVDKSFLNKAFAIFCLLM 137
            F        + M +  DW+F L I T+++       S + + +D   L K F  F   M
Sbjct: 204 GFF---LGDALTMNV--DWVF-LSIFTLISLIGIFIGSYLSNFIDGQKLKKGFGYFIFAM 257

Query: 138 GILM 141
            I +
Sbjct: 258 AIFI 261


>gi|296141695|ref|YP_003648938.1| hypothetical protein Tpau_4028 [Tsukamurella paurometabola DSM
           20162]
 gi|296029829|gb|ADG80599.1| protein of unknown function DUF81 [Tsukamurella paurometabola DSM
           20162]
          Length = 285

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 67/127 (52%), Gaps = 13/127 (10%)

Query: 4   LLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLF----GVGGGLVMVPVLSKAFQLM 59
           LL  F + V  S   + +   LI+  + ++G + G +    G+GGGL++VPV++  F   
Sbjct: 135 LLQAFGIQVG-SSSGLFEGTALIVAVATVTGLIVGAYSAAMGLGGGLLVVPVMAVLF--- 190

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD-WIFVLPITTVVTSLMI 118
                  +H A GTSL V+ P +++  + H RHG+ ++++ K   +  LP + V  SL +
Sbjct: 191 ----GANLHTAAGTSLLVMLPNAIVGAVTHIRHGSADLRVGKPLALAALPGSLVGVSLAL 246

Query: 119 SHVDKSF 125
           +  ++  
Sbjct: 247 ALPERGL 253


>gi|113474376|ref|YP_720437.1| hypothetical protein Tery_0509 [Trichodesmium erythraeum IMS101]
 gi|110165424|gb|ABG49964.1| protein of unknown function DUF81 [Trichodesmium erythraeum IMS101]
          Length = 260

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 7/62 (11%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G L+GLFGVGGG++MVP      Q++ +D+ I   VA+ TSLGVI  TS+ + + H  +G
Sbjct: 153 GLLAGLFGVGGGVIMVP-----LQIILLDEPI--KVAVQTSLGVIVITSISASLGHYFNG 205

Query: 94  TI 95
            +
Sbjct: 206 NV 207


>gi|254384455|ref|ZP_04999796.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194343341|gb|EDX24307.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 292

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 19/126 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +IV   + G ++GL G GGG ++VP L+    L+G    + M VA+GTSL VIA  S   
Sbjct: 129 VIVEGLVVGAVTGLVGSGGGFLVVPALA----LLG---GLPMSVAVGTSLLVIAMKSFSG 181

Query: 86  FMEHRRHGTINMKILKDWIFVLPIT------TVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              H     +N  +  DW   L +T      +++ S     + +  L KAF  F ++MG+
Sbjct: 182 LAGH-----LN-GVQIDWNLALMVTPAAIVGSLIGSRFAGRIPQDTLRKAFGWFVVVMGV 235

Query: 140 LMLKRD 145
            +L + 
Sbjct: 236 FVLSQQ 241


>gi|224824049|ref|ZP_03697157.1| protein of unknown function DUF81 [Lutiella nitroferrum 2002]
 gi|224603468|gb|EEG09643.1| protein of unknown function DUF81 [Lutiella nitroferrum 2002]
          Length = 254

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 11/180 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G+   +  H+A GT+L +I P  ++ F+ +R+   I+ + +        +++ + 
Sbjct: 34  AIPVLGLLYGMNQHLAQGTTLVMITPNVLIGFLRYRQRNDIDTRAVLTMGLTATVSSYIA 93

Query: 115 SLMISHVDKSFLNKAFAIFCLLMG--ILMLKRDRLYCERK---FPDNYVKYIWGMVTGFL 169
           +   + ++   L  AFA+F +L+      L R   +  R     P  +   + G+V+G +
Sbjct: 94  ARFAASLNAHSLQHAFALFLVLLASYFAWLSRSDRHDRRPAVMLPAGF-HPLLGVVSGAM 152

Query: 170 SGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG---WGLNGLP 225
           SG   VGGG +    L+  +G +  +A   +  +    A  ALL    +G   WG+ G+P
Sbjct: 153 SGIFTVGGGLVVVPALVTLFGFTQTQAQGMALALVVPGALAALLSYTQAGNVDWGV-GIP 211



 Score = 36.6 bits (83), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 13/79 (16%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           +SG +SG+F VGGGLV+VP L   F             A G +L ++ P ++ + + + +
Sbjct: 148 VSGAMSGIFTVGGGLVVVPALVTLFGFTQTQ-------AQGMALALVVPGALAALLSYTQ 200

Query: 92  HGTINMKILKDWIFVLPIT 110
            G +      DW   +P+ 
Sbjct: 201 AGNV------DWGVGIPLA 213


>gi|16799705|ref|NP_469973.1| hypothetical protein lin0630 [Listeria innocua Clip11262]
 gi|16413070|emb|CAC95862.1| lin0630 [Listeria innocua Clip11262]
          Length = 246

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 130/258 (50%), Gaps = 31/258 (12%)

Query: 21  DYICLIIVASFLSGTLSGLF-GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           D I   ++A  LS ++ G F G+GGG++++P+L     LMG+        A  ++L V  
Sbjct: 2   DMITYFLIA--LSTSVVGSFLGIGGGVILLPIL----LLMGVSQGTA---AFSSALTVFT 52

Query: 80  -PTSVMSFMEHRRHGTINMKILKDWIFVLPIT--TVVTSLMISHVDKSFLNKAFAIFCLL 136
                 S    R+ G + +  LK  I  +P T    + + M+      F+  A  +  LL
Sbjct: 53  MAIFTCSIYYKRKQGNVGLA-LKIAITSIPTTFLGAIVNQMLPEAVYRFMYGALIVILLL 111

Query: 137 MGILMLKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIY 193
           +  ++ K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +  
Sbjct: 112 L--MVWKKKRNNEKPHFLSKYRIMPYLFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQK 169

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+ATS+ V+ L +  ++       + + G   +S+G       + ++P +IL   + T+
Sbjct: 170 TASATSSYVTLLTSLASI-----GSYAIVGGSDFSIG-------IYMIPGAILGALIGTR 217

Query: 254 LSYMIGKKYLTIGFSMIM 271
           L+ ++ +K++ I F++++
Sbjct: 218 LNKLLDEKWIAILFNILL 235


>gi|228966574|ref|ZP_04127625.1| hypothetical protein bthur0004_33830 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228793096|gb|EEM40648.1| hypothetical protein bthur0004_33830 [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 245

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 112/242 (46%), Gaps = 45/242 (18%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           ++ +L+  FQ       I +HVA+ TSL  +A T++   + H R G + + I        
Sbjct: 19  IIAILTLVFQ-------IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFG 71

Query: 108 PITTVV----TSLMISHVDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKFPDNY- 157
            I + +     SL+ +H+   F        AIF  +  I+  K+++  LY  ++F  NY 
Sbjct: 72  AIGSYIGSKFGSLIPAHLLHWFTAGMLFLSAIFMFIKLIMFQKKEQSSLYKHKEFSVNYL 131

Query: 158 VKYI-WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
           +K +  G+VTG ++G+ G+G   F  L LM+  G +I +    S G + L+  P     I
Sbjct: 132 LKCVCLGLVTGMMAGSFGIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----I 182

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT------IGFSM 269
             G G        LG+ + G +  IL + +LI    T L   IG K+        + FSM
Sbjct: 183 AIGGG--------LGYSSEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRTLLRFSM 231

Query: 270 IM 271
           IM
Sbjct: 232 IM 233


>gi|332982251|ref|YP_004463692.1| hypothetical protein Mahau_1689 [Mahella australiensis 50-1 BON]
 gi|332699929|gb|AEE96870.1| protein of unknown function DUF81 [Mahella australiensis 50-1 BON]
          Length = 125

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 70/138 (50%), Gaps = 17/138 (12%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
           NF   VF  +   +  I       F++G  +GLFG GGG+++VP +S    ++GI++   
Sbjct: 2   NFYKRVFFMRALKITAI------GFVTGLFNGLFGSGGGMIVVPAMS---MILGIEE--- 49

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITT--VVTSLMISHVDKS 124
            H A  T+L +I P +++S   + + G ++ ++   W   L   +   + + ++  V   
Sbjct: 50  -HDAHATALSIILPLTIVSIFIYAKSGIVDWQL--TWKVALGGVSGGYIGARLLHVVPAD 106

Query: 125 FLNKAFAIFCLLMGILML 142
            L K FA+F ++  + M+
Sbjct: 107 TLRKIFAVFMIIAAVRMI 124


>gi|325955348|ref|YP_004239008.1| hypothetical protein Weevi_1738 [Weeksella virosa DSM 16922]
 gi|323437966|gb|ADX68430.1| protein of unknown function DUF81 [Weeksella virosa DSM 16922]
          Length = 265

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 8/122 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L++   F  G L+GL G GGG ++VP L    QL        +  A  TSL +I+  S++
Sbjct: 148 LLLSEGFFIGCLTGLVGAGGGFLIVPALMVIAQL-------DIKHASATSLFIISINSLI 200

Query: 85  S-FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
             F+    H TI+   L +++F+  I  ++ +   + +    L K+FAIF +LM I +  
Sbjct: 201 GFFIGDVHHLTIDWGFLLEFVFLSMIGILLGTFFSTKISTETLKKSFAIFIILMAIFIFL 260

Query: 144 RD 145
            +
Sbjct: 261 EE 262



 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 38/200 (19%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G + GL G GG ++ VP+L+  F     D+     VA   SL ++  TS++  ++     
Sbjct: 16  GIVLGLMGGGGSILAVPILAYLFHF---DEK----VATAYSLFIVGSTSLVGGIKQ---- 64

Query: 94  TINMKILKDW----IFVLPI--------TTVVTSL--MISHVDKSFLNKAFAIFCLLMGI 139
              +K + DW    IF LP         T VV +L   + HV +  + +  A+F L   +
Sbjct: 65  --ALKKMVDWRAVLIFGLPAVIGISIIRTFVVPNLPENLFHVGQYIVTRRMAMFGLFSIL 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIW-------GMVTGFLSGALGVGGG-IFTNLLMLFYGAS 191
           ++     L  + K P    K  +       G   G L+G +G GGG +    LM+     
Sbjct: 123 MLFAAFSLLSDNKGPRRKQKSKFHPLLLSEGFFIGCLTGLVGAGGGFLIVPALMVIAQLD 182

Query: 192 IYKATATS---AGVSALIAF 208
           I  A+ATS     +++LI F
Sbjct: 183 IKHASATSLFIISINSLIGF 202


>gi|311747495|ref|ZP_07721280.1| membrane protein [Algoriphagus sp. PR1]
 gi|126574855|gb|EAZ79226.1| membrane protein [Algoriphagus sp. PR1]
          Length = 268

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 62/115 (53%), Gaps = 7/115 (6%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G ++G+ G GGG +++P L    +L        M  A+GTSL +IA  S++ F+    + 
Sbjct: 160 GLVTGIVGAGGGFLIIPALVLLAKL-------PMKKAVGTSLLIIAAKSLIGFLGDVSNQ 212

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
           TI+ K+L  +  +  +   + S +   ++++ L K F  F L MG+ ++ ++ ++
Sbjct: 213 TIDWKMLLIFTGLSIVGIFIGSALSKKINENALKKGFGWFVLAMGVYIISKELIF 267


>gi|51035327|emb|CAF32676.1| hypothetical protein [Oenococcus phage fOg30]
          Length = 252

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 14/185 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +IV   + GT   LFG GG  + + +L+    ++G++ S     A  TSL  + P+ 
Sbjct: 3   VVFLIVIGLIVGTFVILFGGGGAAIYLGILTG---VVGLNAS----TAASTSLVTVLPSL 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++    + R GTI  ++    +       ++ SL+ S++  +       I  +L+GI ML
Sbjct: 56  ILGVWTYYRQGTIKTRLGNQMLITAIPAVIIGSLISSYIPDNLYKWIVGIILILLGINML 115

Query: 143 KRDR-------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +       +  +    D +   I+G++ G + G  G+ GG      +   G S   A
Sbjct: 116 FQKQKSQVDPVMSKQINRKDRFKAGIFGIIGGLMVGVAGMNGGAPIIAGLFLIGLSTVNA 175

Query: 196 TATSA 200
            ATSA
Sbjct: 176 VATSA 180


>gi|313620197|gb|EFR91666.1| integral membrane protein, putative [Listeria innocua FSL S4-378]
          Length = 246

 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 130/258 (50%), Gaps = 31/258 (12%)

Query: 21  DYICLIIVASFLSGTLSGLF-GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           D I   ++A  LS ++ G F G+GGG++++P+L     LMG+        A  ++L V  
Sbjct: 2   DMITYFLIA--LSTSVVGSFLGIGGGVILLPIL----LLMGVSQGTA---AFSSALTVFT 52

Query: 80  -PTSVMSFMEHRRHGTINMKILKDWIFVLPIT--TVVTSLMISHVDKSFLNKAFAIFCLL 136
                 S    R+ G + +  LK  I  +P T    + + M+      F+  A  +  LL
Sbjct: 53  MAIFTCSIYYKRKQGNVGLA-LKIAITSIPTTFLGAIVNQMLPEAVYRFMYGALIVILLL 111

Query: 137 MGILMLKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIY 193
           +  ++ K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +  
Sbjct: 112 L--MVWKKKRNNEKPHFLSKYRIMPYLFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQK 169

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+ATS+ V+ L +  ++       + + G   +S+G       + ++P +IL   + T+
Sbjct: 170 TASATSSYVTLLTSLASI-----GSYAIVGGSDFSIG-------IYMIPGAILGALIGTR 217

Query: 254 LSYMIGKKYLTIGFSMIM 271
           L+ ++ +K++ I F++++
Sbjct: 218 LNKLLDEKWIAILFNILL 235


>gi|50057025|emb|CAF32664.1| hypothetical protein [Oenoccocus phage fOgPSU1]
          Length = 252

 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 14/185 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +IV   + GT   LFG GG  + + +L+    ++G++ S     A  TSL  + P+ 
Sbjct: 3   VVFLIVIGLIVGTFVILFGGGGAAIYLGILTG---VVGLNAS----TAASTSLVTVLPSL 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++    + R GTI  ++    +       ++ SL+ S++  +       I  +L+GI ML
Sbjct: 56  ILGVWTYYRQGTIKTRLGNQMLITAIPAVIIGSLISSYIPDNLYKWIVGIILILLGINML 115

Query: 143 KRDR-------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +       +  +    D +   I+G++ G + G  G+ GG      +   G S   A
Sbjct: 116 FQKQKSQVDPVMSKQINRKDRFKAGIFGIIGGLMVGVAGMSGGAPIIAGLFLIGLSTVNA 175

Query: 196 TATSA 200
            ATSA
Sbjct: 176 VATSA 180


>gi|242239218|ref|YP_002987399.1| hypothetical protein Dd703_1781 [Dickeya dadantii Ech703]
 gi|242131275|gb|ACS85577.1| protein of unknown function DUF81 [Dickeya dadantii Ech703]
          Length = 254

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 13/134 (9%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G+   +  H+A GT+L +I P  ++ F+ +R+   I+ ++      +L     V+
Sbjct: 34  AIPVLGMLFGMNQHIAQGTALIMITPNVLIGFLRYRQRNRIDTRM----TLILCGFATVS 89

Query: 115 SLMISHVDK----SFLNKAFAIFCLLMGILMLK---RDRLYCERKFPDNYVKY--IWGMV 165
           S + +HV        L KAFA+F L++ +  +    + R +          +Y  + G+ 
Sbjct: 90  SYLAAHVASLIPVDNLQKAFAVFLLVLAVYYIGQWFKSRHHHRAATALLSPRYLPVLGVA 149

Query: 166 TGFLSGALGVGGGI 179
           +GF+SG   VGGG+
Sbjct: 150 SGFMSGIFTVGGGL 163



 Score = 39.3 bits (90), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 19/118 (16%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           SG +SG+F VGGGLV+VP L   F             A G +L ++ P ++ +   + + 
Sbjct: 150 SGFMSGIFTVGGGLVVVPALVTLFGFTQTQ-------AQGIALALVVPGALAALASYAQA 202

Query: 93  GTINMKILKDWIFVLP-----ITTVVTSLMISH-VDKSFLNKAFAIFCLLMGILMLKR 144
           G +      DW   LP     I +V   + ++H +  SFL  AF +  L + + ML +
Sbjct: 203 GNV------DWATGLPLALGGILSVSWGVALAHRLPVSFLRLAFCLVLLGVALTMLWK 254


>gi|296109841|ref|YP_003616790.1| protein of unknown function DUF81 [Methanocaldococcus infernus ME]
 gi|295434655|gb|ADG13826.1| protein of unknown function DUF81 [Methanocaldococcus infernus ME]
          Length = 259

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 15/225 (6%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++VP+L   F  +G+  +  + +A+GTSL  I   S+ S +   RH       L   IF 
Sbjct: 25  LLVPILYHYFISLGVPSTTAIKMAIGTSLFTIFLNSLFS-LYFSRHQLDLRSSLHIGIFG 83

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY---IWG 163
           +  + +   L I    +  + K F  F +++ I ++ +     E  F  N       + G
Sbjct: 84  IFGSFIGAYLTIKVFPEYVIKKIFGFFLIILSIYLIFKKHKDIEN-FQGNICNKKLSLLG 142

Query: 164 MVTGFLSGALGVGGGIFT----NLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            +TG LS  LG+GGGI      N+L+      I +A   S G+ ++I FP +++ ++S  
Sbjct: 143 FITGILSSMLGIGGGIIVIPSLNILL---SVPIKRAITISIGMISIITFPGVIIYMFSSI 199

Query: 220 G-LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           G  + L  +++G+V++   L +LP  I  + +  ++   I  KYL
Sbjct: 200 GEFDSL--YNIGYVSLSTSLTLLPFCITFSKVGAQIKDKINTKYL 242


>gi|228959862|ref|ZP_04121535.1| hypothetical protein bthur0005_33360 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229047356|ref|ZP_04192954.1| hypothetical protein bcere0027_33430 [Bacillus cereus AH676]
 gi|228723981|gb|EEL75328.1| hypothetical protein bcere0027_33430 [Bacillus cereus AH676]
 gi|228799800|gb|EEM46744.1| hypothetical protein bthur0005_33360 [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 251

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV----TSLMISH 120
           I +HVA+ TSL  +A T++   + H R G + + I         I + +     SL+ +H
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 94

Query: 121 VDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKFPDNY-VKYI-WGMVTGFLSGAL 173
           +   F        AIF  +  I+   +++  LY  +KF  NY +K I  G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKKFSMNYLLKCICLGLVTGMMAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I +    S G + L+  P     I  G G        LG+ 
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----IAIGGG--------LGYS 197

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           + G +  IL + +LI    T L   IG K+      + + FSMIM
Sbjct: 198 SEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRMLLRFSMIM 239


>gi|189345900|ref|YP_001942429.1| hypothetical protein Clim_0357 [Chlorobium limicola DSM 245]
 gi|189340047|gb|ACD89450.1| conserved hypothetical protein [Chlorobium limicola DSM 245]
          Length = 121

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 20/118 (16%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPTSVMSFMEHRR 91
           +G LSG+FGVGGG+++VP L   F        +  H A  TSL  ++ P  ++  ME+ R
Sbjct: 13  AGLLSGMFGVGGGIIIVPALVLLF-------GMSQHSANATSLVALLLPVGILGVMEYYR 65

Query: 92  HGTINMK------ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            G I  +      IL   +F         + + S +    L KAFA+F    GI+ L+
Sbjct: 66  SGKITTENIWLGLILAAGLFA---GAFFGARIASSLSSDLLRKAFALFT---GIVALR 117


>gi|229061244|ref|ZP_04198594.1| hypothetical protein bcere0026_33350 [Bacillus cereus AH603]
 gi|228718115|gb|EEL69755.1| hypothetical protein bcere0026_33350 [Bacillus cereus AH603]
          Length = 245

 Score = 45.8 bits (107), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS----LMISH 120
           I +HVA+ TSL  +A T++   + H R G +   I         I + + S    L+ +H
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVVSHYREGNVVFVIGGIVGGFGAIGSFIGSKFGSLIPAH 88

Query: 121 VDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKF-PDNYVKYIW-GMVTGFLSGAL 173
           +   F        AIF  +  I+   R+R  L  E++   DN ++ I+ G+VTG L+GA 
Sbjct: 89  LLHWFTAGMLFLSAIFMFIRLIMFQNRERSSLKEEKELSKDNVIECIFLGLVTGILAGAF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I +    S G + L+  P   + I  G+G +     S G++
Sbjct: 149 GIGSAPFIQLGLMVLLGLTIRQ----SVGTTMLVILP---IAIGGGFGYS-----SEGYL 196

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           +      +L + +LI    T L   IG K+      + + FSMIM
Sbjct: 197 D-----YVLLVQVLI---GTMLGAYIGAKFTNYAPRMLLRFSMIM 233


>gi|312884383|ref|ZP_07744089.1| membrane protein [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367966|gb|EFP95512.1| membrane protein [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 260

 Score = 45.8 bits (107), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 18/186 (9%)

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG---ILMLKRDRL 147
           R G +N+K ++  IF   + +   + ++ ++D + L     I  +++    +LM K  + 
Sbjct: 67  RKGIVNLKEMRLAIFCTFLGSAAGAEVVQYIDANLLTSLIPILLVVISLYFLLMPKTRQH 126

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALI 206
             + +  +    ++ G   GF  G  G G G IFT   ++F   S+ +ATA +  ++   
Sbjct: 127 EGKARLSETLFAFLVGGGVGFYDGFFGPGTGSIFTVCFVVFANLSLVEATAKTKVLNFTS 186

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILPISILITPLATKLSYM 257
              ALL  I     + GLP W LG V          +GA +++      I PL   +S +
Sbjct: 187 NIGALLFFI-----IAGLPIWELGLVMALGGVIGARLGARVVVTKGQKWIRPLVIVMSML 241

Query: 258 IGKKYL 263
           +  K L
Sbjct: 242 MASKLL 247


>gi|262279143|ref|ZP_06056928.1| permease [Acinetobacter calcoaceticus RUH2202]
 gi|262259494|gb|EEY78227.1| permease [Acinetobacter calcoaceticus RUH2202]
          Length = 271

 Score = 45.8 bits (107), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 7/173 (4%)

Query: 32  LSGTLSGLFGVGGGLVMVPVL-SKAFQLMGIDDSICMH---VAMGTSLGVIAPTSVMSFM 87
           LSG  + LFG GGG V VP+L +      G + S+ +H   +++ TS  V+  ++  +  
Sbjct: 13  LSGVTTWLFGFGGGFVAVPLLYTVIIHKWGNESSVGIHSMQISVATSAFVMLCSASFATF 72

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            H   G I+ + ++     + +  VV ++M S    ++L   F  +  +  I    R   
Sbjct: 73  RHYLSGHIDWQKIRFLWGGIALGGVVGAVMASLFSGNWLRWIFMSYVFVTIIDCYYRPGF 132

Query: 148 YCERKFPDNY---VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
               +   NY    + I G + G+++  LGVGG + T  L+   G+S+ +A A
Sbjct: 133 MVTSRQRQNYGQNSELIKGGIIGWVAALLGVGGSVMTVPLLRRRGSSMAEAVA 185


>gi|295133829|ref|YP_003584505.1| hypothetical protein ZPR_1984 [Zunongwangia profunda SM-A87]
 gi|294981844|gb|ADF52309.1| membrane protein, putative [Zunongwangia profunda SM-A87]
          Length = 271

 Score = 45.8 bits (107), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 19/127 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+I+   L+G ++GL G GGG ++VP+L     L G++    M  A+GTSL +IA  S++
Sbjct: 152 LMILLGALTGLVTGLVGAGGGFIIVPIL---VFLAGLN----MKEAVGTSLFIIAINSII 204

Query: 85  SFMEHRRHGTINMKILKDWIFVL-----PITTVVTSLMISH-VDKSFLNKAFAIFCLLMG 138
            F+    H  +      DW F+L      I  +   + +S  ++   L KAF    L+MG
Sbjct: 205 GFLGDLGHLNV------DWFFLLLFTIISIVGIFFGIYLSRFINSQKLKKAFGWMVLIMG 258

Query: 139 ILMLKRD 145
           I +L  +
Sbjct: 259 IYILYME 265


>gi|15616016|ref|NP_244321.1| hypothetical protein BH3454 [Bacillus halodurans C-125]
 gi|10176077|dbj|BAB07173.1| BH3454 [Bacillus halodurans C-125]
          Length = 273

 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 26/198 (13%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    L+GT+  L G+GGG+++VP L        + +++   VA+GTSL ++  T + 
Sbjct: 5   ILVCVGLLAGTIGSLMGLGGGIIVVPALLWLGGTALLSEAVTPQVAVGTSLLIMIFTGLS 64

Query: 85  SFMEHRRHGTINMKILKDWIFVL---PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S   + + GT++ K     IF +   P   V   L      + F    F +F +LM  L+
Sbjct: 65  STFAYMKKGTVDYK--SGLIFFIGSGPGALVGVWLNQGLQVQQF-QIYFGLFVILMSFLL 121

Query: 142 LKRDRLY--------CERKFPD------NYVKYIW-----GMVTGFLSGALGVGGG-IFT 181
           + R RL           R + D      +Y    W         G LSG  G+GGG +  
Sbjct: 122 MIRHRLKPMEIKKKGIRRVYVDPEGQRYDYGFQAWLGILIAFFVGLLSGLFGIGGGTLLV 181

Query: 182 NLLMLFYGASIYKATATS 199
             ++L +    + A ATS
Sbjct: 182 PAMILLFAFPPHVAVATS 199


>gi|315127382|ref|YP_004069385.1| hypothetical protein PSM_A2320 [Pseudoalteromonas sp. SM9913]
 gi|315015896|gb|ADT69234.1| hypothetical protein PSM_A2320 [Pseudoalteromonas sp. SM9913]
          Length = 269

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 23/236 (9%)

Query: 49  VPVLSKAFQLMGIDDSICMHV---AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           VPVL+    L+G + +   HV   A+ TSL  I  TS  S + H ++  +  KI   W+ 
Sbjct: 34  VPVLTS--LLLGFNVAAADHVLVIAIATSLASILFTSTSSALAHHKNDNVPWKI-APWVM 90

Query: 106 V-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKYIW 162
             + I  +++    S + +  L   FA+  + + + M+   R+++      P        
Sbjct: 91  SGVAIGALISGFAASFIPEKMLRTVFAVSVVFIAMRMVLSARNKVSVGHPMPA------- 143

Query: 163 GMVTGFLSGALGVGGGIFTNL-------LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
           G V G +S  +G   G+           ++ ++   I KA   +A    +IAF   +  +
Sbjct: 144 GPVLGSISAIMGALSGLIGIGGGALLVPMLHYFSVDIKKAIGCAAACGIVIAFFGSIGYV 203

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            +GW +  L    +GFV + A+L I+  S  I P+  K ++ +    +   F+M++
Sbjct: 204 SAGWQVTDLAHGFMGFVYLPALLGIVVTSWFIAPIGAKATHYLPVNTIKKVFAMLL 259


>gi|320104497|ref|YP_004180088.1| hypothetical protein Isop_2974 [Isosphaera pallida ATCC 43644]
 gi|319751779|gb|ADV63539.1| protein of unknown function DUF81 [Isosphaera pallida ATCC 43644]
          Length = 123

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 10/116 (8%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPTSVMSFMEHRR 91
           +G LSG+FG+GGGLV+VPVL+  F       ++    A+GTSL  ++ P  ++  +E+ R
Sbjct: 14  AGILSGMFGIGGGLVIVPVLALVF-------AVDQKTAVGTSLFALMFPVGILGVLEYAR 66

Query: 92  HGTINMKILKDWIFV-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
              I +     WI + L     + +L++  +    + + + +F +++G+  L   R
Sbjct: 67  RKEI-LYASGLWIALGLLAGAYLGALLVGKLSPLTMKRLYGVFLIVVGVYYLYSTR 121


>gi|15893538|ref|NP_346887.1| permease [Clostridium acetobutylicum ATCC 824]
 gi|15023081|gb|AAK78227.1|AE007537_12 Conserved membrane protein, predicted permease [Clostridium
           acetobutylicum ATCC 824]
 gi|325507657|gb|ADZ19293.1| Conserved membrane protein, predicted permease [Clostridium
           acetobutylicum EA 2018]
          Length = 120

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 8/113 (7%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPTSVMSF 86
           V   ++G LSGLFG+GGG+V++P L        I        A GTSL  ++ P  + +F
Sbjct: 9   VIGIVAGVLSGLFGIGGGVVIIPALVMFAGFSQIK-------AQGTSLIAMLPPVGIFAF 61

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           M++ + G  ++         + I       + + +  S L KAF +F +L+GI
Sbjct: 62  MQYYKKGNTDIYAGIVICIAMVIAARFGGQLANILPVSVLKKAFGVFIILVGI 114


>gi|330813862|ref|YP_004358101.1| protein of unknown function DUF81 [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486957|gb|AEA81362.1| protein of unknown function DUF81 [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 123

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 1/102 (0%)

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           M  GF +  LG+GGG      M  +G  I  A  TSA +  LI+        +SG+  + 
Sbjct: 1   MGLGFFAVPLGIGGGSLGVPAMRLFGYPIKIAIGTSAAIGFLISIFGASSMSFSGYFFDV 60

Query: 224 L-PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           +  P SLG+VN+   L+ +P+++ + P+  +L++ I K  L+
Sbjct: 61  VNTPLSLGYVNLPGFLVFVPVTMFMAPIGARLAHRIEKTLLS 102


>gi|257062790|ref|YP_003142462.1| predicted permease [Slackia heliotrinireducens DSM 20476]
 gi|256790443|gb|ACV21113.1| predicted permease [Slackia heliotrinireducens DSM 20476]
          Length = 277

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 7/68 (10%)

Query: 27 IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
          ++A  L G LSGLFG+GGG +MVP+   AF L  I        A  TSL  + PTS+   
Sbjct: 8  VLAGLLVGVLSGLFGIGGGTIMVPLFRLAFGLPPIG-------ATATSLFTVIPTSLSGL 60

Query: 87 MEHRRHGT 94
          ++H ++ T
Sbjct: 61 VKHVKNKT 68


>gi|268590380|ref|ZP_06124601.1| putative membrane protein [Providencia rettgeri DSM 1131]
 gi|291314292|gb|EFE54745.1| putative membrane protein [Providencia rettgeri DSM 1131]
          Length = 271

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 12/178 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQL----MGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           F+SG  + LFG GGG + VP+L     L         S+ M +A+ TS  V+  +S +S 
Sbjct: 10  FISGITTALFGFGGGFITVPLLYALITLVWGPQSDAGSVAMQIAVATSTCVMIFSSTLSS 69

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL------ 140
             H   G ++  I++ +I  + I  ++ +++   VD + +   F I  L++ IL      
Sbjct: 70  RAHYLKGNLSWPIIRPFIIPISIGGILGAIVALSVDSALIRWIF-IGYLIITILDCFIRP 128

Query: 141 -MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             +K + +  +      +     G+V G ++  LGVGG + T  LM   GAS+ +A A
Sbjct: 129 GFMKTESIGIQASRGGIFADTPIGVVIGAVAAFLGVGGSVMTVPLMRRRGASMIQAAA 186


>gi|304317021|ref|YP_003852166.1| hypothetical protein Tthe_1572 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778523|gb|ADL69082.1| protein of unknown function DUF81 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 119

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 8/111 (7%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + I L+I+  F++G L+GLFG GGG ++VP +     L+GI+D    H A  T++ +I P
Sbjct: 3   NRIKLLIIG-FVTGILNGLFGAGGGTIIVPFM---VFLLGIED----HKAHATAISIILP 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
            +V+S + + ++G  N     +      I  ++ + +++ V   +L K F 
Sbjct: 55  LTVLSSIIYIKNGIFNFPTTLNVTLGSVIGGLLGAFLLNKVPIKYLRKLFG 105


>gi|229191760|ref|ZP_04318736.1| hypothetical protein bcere0002_34190 [Bacillus cereus ATCC 10876]
 gi|228591699|gb|EEK49542.1| hypothetical protein bcere0002_34190 [Bacillus cereus ATCC 10876]
          Length = 251

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV----TSLMISH 120
           I +HVA+ TSL  +A T++   + H R G +   I         I + +     SL+ +H
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVVSHYREGNVAFIIGGIVGGFGAIGSYIGSKFGSLIPAH 94

Query: 121 VDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKFPDNY-VKYI-WGMVTGFLSGAL 173
           +   F        AIF  +  I+   +++  LY  ++F  NY +K I  G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKEFSMNYLLKCICLGLVTGMMAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+ +G +I +    S G + L+  P     I  G G        LG+ 
Sbjct: 155 GIGSAPFIQLGLMVLFGLTIQQ----SVGTTMLVILP-----IAIGGG--------LGYS 197

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           + G +  IL + +LI    T L   IG K+      + + FSMIM
Sbjct: 198 SEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRMLLRFSMIM 239


>gi|307720419|ref|YP_003891559.1| hypothetical protein Saut_0498 [Sulfurimonas autotrophica DSM
           16294]
 gi|306978512|gb|ADN08547.1| protein of unknown function DUF81 [Sulfurimonas autotrophica DSM
           16294]
          Length = 246

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 26/216 (12%)

Query: 31  FLSGTLSGLF---GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           FL+  LS LF   GVG  + +VP+    F +MG+  ++   + +  +       S+M+F 
Sbjct: 9   FLTLALSTLFSMGGVGSAIGLVPI----FSMMGMPLNLAKAIGLFINSASTITASIMNFF 64

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
                G +++      I  + I T V + M  +V K  +      F ++  +L++  +R 
Sbjct: 65  R----GVLDVGFAIPLIVSIMIATPVGAWMSQYVQKEIVEWVLVAFLVVSALLLIFSNR- 119

Query: 148 YCERK--FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV--- 202
             E+K  +   ++ Y+ G   G +SG +GVGGG     L++  G    KA    + V   
Sbjct: 120 --EQKVVYDKAWILYVIGGTVGLISGTIGVGGGSLIMPLLILLGFDAKKAAYAISFVIPF 177

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
           S L AF   L  ++  W L       LG V + A++
Sbjct: 178 STLGAFATYLSFVHMDWIL-------LGVVTVAAII 206


>gi|240102618|ref|YP_002958927.1| putative permease [Thermococcus gammatolerans EJ3]
 gi|239910172|gb|ACS33063.1| Predicted permease [Thermococcus gammatolerans EJ3]
          Length = 254

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 26/258 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + Y+    V  F+ G L+ LFG+GGG ++VP L+    L+G++    MH A+GTS   + 
Sbjct: 2   LKYLSYFAVGVFI-GILAALFGLGGGFLVVPTLN----LLGVE----MHHAVGTSSAAVV 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ S + + R   I+ ++         I   + + + S +  S L   F +  +++ I
Sbjct: 53  FTSLSSTIAYSRQKRIHYRVGLLLASTAVIGAYIGAWLTSFISASQLKVIFGLALVVVAI 112

Query: 140 LMLKRDRLY-CERKFPDNYVKYIWGMVTGFLSG---ALGVGGGIFTNLLMLFY-GASIYK 194
            + ++      E +  D  V Y    + GF +G    L   GG   N+  L Y G  I+ 
Sbjct: 113 RIYRKKTAEPQEVRLEDVRVNYWLVPIGGFFAGIASGLLGVGGGIINVPFLTYLGLPIHY 172

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A ATS   S  I F AL            L  +++G V    +++++P  I+   L   +
Sbjct: 173 AVATS---SFAIVFTAL---------AGALKHYAMGNVETQWLVLLVPGLIIGAQLGAGI 220

Query: 255 SYMIGKKYLTIGFSMIMF 272
           +       L   F+++MF
Sbjct: 221 ARRTKASSLKKAFAIVMF 238


>gi|25026873|ref|NP_736927.1| hypothetical protein CE0317 [Corynebacterium efficiens YS-314]
 gi|259506064|ref|ZP_05748966.1| integral membrane protein [Corynebacterium efficiens YS-314]
 gi|23492153|dbj|BAC17127.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259166352|gb|EEW50906.1| integral membrane protein [Corynebacterium efficiens YS-314]
          Length = 284

 Score = 45.4 bits (106), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 19/118 (16%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G ++GL G GGG ++VP L+    L+G    + M VA+GTSL VI   S+ SF     + 
Sbjct: 145 GLVTGLVGAGGGFLVVPALA----LLG---GLPMPVAVGTSLLVI---SMKSFAGLAGYM 194

Query: 94  TINMKILKDWIFVLPIT------TVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           T    +  DW  VL +T       ++ + + S V +  L K F +F L+MG+ +L ++
Sbjct: 195 T---SVSLDWPLVLAVTGAALVGALIGARLTSVVPEQALRKGFGVFVLVMGVFILYQE 249


>gi|313682521|ref|YP_004060259.1| hypothetical protein Sulku_1397 [Sulfuricurvum kujiense DSM 16994]
 gi|313155381|gb|ADR34059.1| protein of unknown function DUF81 [Sulfuricurvum kujiense DSM
           16994]
          Length = 245

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 17/169 (10%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           GTLSG FG+GGG V VP+L   +   GI ++I + V       ++A + + +++ H++  
Sbjct: 13  GTLSGFFGIGGGTVSVPIL--LYLGFGIKEAIGISVTQ-----MVAGSLLAAWIHHKKQ- 64

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF-AIFCLLMGILMLKRDRLYCERK 152
           T  +  +K + +   +  +   +++  +  S L   F +I    +G L L       E  
Sbjct: 65  TYAIGDIKYFGYGGILGAIAGGILVKALHSSILEWLFLSIVAFTLGRLALSNP----EPT 120

Query: 153 FPDNYVKYIW---GMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATA 197
            P+   + ++   G V G  SG LGVGG I  T +L+ F G  + KA+A
Sbjct: 121 RPEVVNRPLYTFVGSVIGVFSGMLGVGGSILMTPVLVSFMGFPLKKASA 169


>gi|312129044|ref|YP_003996384.1| hypothetical protein Lbys_0238 [Leadbetterella byssophila DSM
           17132]
 gi|311905590|gb|ADQ16031.1| protein of unknown function DUF81 [Leadbetterella byssophila DSM
           17132]
          Length = 271

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 18/134 (13%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           SK   V     I++   + G L+GL G GGG +++P    A  L G    + M +A+GTS
Sbjct: 140 SKSAEVKT-TRIMLEGVMVGILTGLVGAGGGFLIIP----ALILFG---KLPMKIAVGTS 191

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV-VTSLMISHV-----DKSFLNK 128
           L +IA  S + F+    H    +    DW F+L +T + +  + + H      D   L K
Sbjct: 192 LIIIAANSSIGFLSGLSHHAEEI----DWKFLLTLTALAIIGIFLGHRISKKWDGERLKK 247

Query: 129 AFAIFCLLMGILML 142
            F    L++GI +L
Sbjct: 248 NFGRLILVLGITIL 261


>gi|114331231|ref|YP_747453.1| hypothetical protein Neut_1235 [Nitrosomonas eutropha C91]
 gi|114308245|gb|ABI59488.1| protein of unknown function DUF81 [Nitrosomonas eutropha C91]
          Length = 259

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 24/175 (13%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A   +G + GL GVGGG +M P+L   F   GI  +     A+ T L   A T +     
Sbjct: 9   AGTFTGFIIGLTGVGGGALMTPILLLFF---GISPT----TAVATDLWFAAITKIAGARI 61

Query: 89  HRRHGTINMKILKD-WIFVLPITTVVTSL--MISHVDK-SFLNKAFAIFCLLMGILMLKR 144
           H  +G ++ +++K  W   LP+ +++  L  M +H+ K  +L K   I  L+  I +L  
Sbjct: 62  HHTNGNVDWQVVKRLWAGSLPMASLIVLLISMGTHIVKVDWLTKGIGIVVLVTAIGLLVA 121

Query: 145 DRL--YCERK---FPDNYVKYIWGMVTGFLSGALG-------VGGGIFTNLLMLF 187
            RL  + +RK    P+ + K +  ++T F    LG       VG G+  ++++L+
Sbjct: 122 PRLIAFAKRKQIGQPERF-KTMQAVLTIFAGAILGVCVALTSVGAGVLGSVMLLY 175


>gi|325954102|ref|YP_004237762.1| hypothetical protein Weevi_0465 [Weeksella virosa DSM 16922]
 gi|323436720|gb|ADX67184.1| protein of unknown function DUF81 [Weeksella virosa DSM 16922]
          Length = 268

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 18/137 (13%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           +KD +     +I++   L G L+GL G GGG +++P L    ++        M +A+GTS
Sbjct: 141 NKDEIQYNYPMILLEGGLVGVLTGLVGAGGGFLIIPALVLLARM-------PMKLAVGTS 193

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDW----IF-VLPITTVVTSLMIS-HVDKSFLNK 128
           L +IA  S++ F+     G IN   + DW    IF VL +  +   + +S  +    L  
Sbjct: 194 LFIIAIKSLLGFL-----GDINNGEIIDWQLLSIFTVLAVVGIFIGIFLSKKIAGDKLKT 248

Query: 129 AFAIFCLLMGILMLKRD 145
           AF  F L+MG+ +L ++
Sbjct: 249 AFGYFVLVMGVYILVKE 265


>gi|241667251|ref|ZP_04754829.1| hypothetical protein FphipA2_00685 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254875802|ref|ZP_05248512.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254841823|gb|EET20237.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 252

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 16/211 (7%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD---SICMHVAMGTSLGVIAPTSVM 84
           +  F++  +S L G G GL+ VP    AF  + +        M +A+ T  G+    S +
Sbjct: 8   IVGFVASFISTLLGGGAGLIAVP----AFYFIIVHTYGADFAMQIAITTCCGMSIFLSSI 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLK 143
           +  +H R G I++  LK ++  L I  +V S++  H++   L   FAI     GI ++L 
Sbjct: 64  ATYKHYRKGNIHLGELKYYLVYLSIGALVGSIVAKHINTDLLKIVFAILLFGSGIWMILH 123

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
            D    +      Y  + +  V   L+ +       F  +  +  G  I KA A ++   
Sbjct: 124 NDNKVVKLPRSARYSIFSFCGVLSVLASST-----TFATMFFIKIGTDIKKAIAITSICV 178

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
            + +  A  V  Y   G++   P +LG++NI
Sbjct: 179 LINSSIAAFVLTY---GISVNVPSTLGYLNI 206


>gi|90577864|ref|ZP_01233675.1| hypothetical protein VAS14_12474 [Vibrio angustum S14]
 gi|90440950|gb|EAS66130.1| hypothetical protein VAS14_12474 [Vibrio angustum S14]
          Length = 269

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 10/214 (4%)

Query: 47  VMVPVLS---KAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDW 103
           V+VP+LS     F ++  +  +   VA+ TSL  I  TS  S + H ++G +    L  W
Sbjct: 31  VIVPILSIILLHFAILPPEQVVI--VAIATSLASILFTSTSSAIAHHKNGNVPWN-LAPW 87

Query: 104 IFV-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML---KRDRLYCERKFPDNYVK 159
           I   + +  +++  + + +  + +   FA+   L+   M     +      R  P+NYV 
Sbjct: 88  IMTGVALGALISGFLAALLPGNVVRIIFAVSVALIAFKMFYSSTKKETTTTRNMPNNYVL 147

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
                +TG LS  +G+GGG     L+ F+   + KA   ++    +IA    +  + SG 
Sbjct: 148 TFLTTITGGLSAMIGIGGGALLVPLLTFFSLDMKKAIGCASACGIVIALFGSIGYVSSGI 207

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
               +     GFV + A+  I+  S    PL  K
Sbjct: 208 SYLSITDGFAGFVYLPALFGIVCTSWFTAPLGAK 241


>gi|145294114|ref|YP_001136935.1| hypothetical protein cgR_0072 [Corynebacterium glutamicum R]
 gi|140844034|dbj|BAF53033.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 248

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 19/128 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++V   + G ++GL G GGG ++VP    A  L+G    + M VA+GTSL VI   S   
Sbjct: 134 VLVDGLVVGAVTGLVGAGGGFLVVP----ALALLG---GLSMPVAVGTSLVVITMKSFAG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPIT------TVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              +         +  DW  VL +T      ++  S +   V ++ L K F +F L+MG+
Sbjct: 187 LAGYLTS------VQLDWGLVLMVTAAAIVGSLAGSRLAGRVPETLLRKGFGVFVLVMGV 240

Query: 140 LMLKRDRL 147
            +L  + L
Sbjct: 241 FVLGLELL 248


>gi|19551303|ref|NP_599305.1| hypothetical protein NCgl0052 [Corynebacterium glutamicum ATCC
           13032]
 gi|62388948|ref|YP_224350.1| hypothetical protein cg0072 [Corynebacterium glutamicum ATCC 13032]
 gi|41324281|emb|CAF18621.1| conserved hypothetical membrane protein [Corynebacterium glutamicum
           ATCC 13032]
          Length = 248

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 19/128 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++V   + G ++GL G GGG ++VP    A  L+G    + M VA+GTSL VI   S   
Sbjct: 134 VLVDGLVVGAVTGLVGAGGGFLVVP----ALALLG---GLSMPVAVGTSLVVITMKSFAG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPIT------TVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              +         +  DW  VL +T      ++  S +   V ++ L K F +F L+MG+
Sbjct: 187 LAGYLTS------VQLDWGLVLMVTAAAIVGSLAGSRLAGRVPETLLRKGFGVFVLVMGV 240

Query: 140 LMLKRDRL 147
            +L  + L
Sbjct: 241 FVLGLELL 248


>gi|90579351|ref|ZP_01235161.1| predicted permease [Vibrio angustum S14]
 gi|90440184|gb|EAS65365.1| predicted permease [Vibrio angustum S14]
          Length = 254

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 14/176 (7%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + S +S TL+ L G G GL+  P+L   F  +    ++  H     +LGV A       +
Sbjct: 11  IGSLISNTLASLSGGGAGLIQFPLL--IFLGLPFGIALATHKVASVALGVGAA------I 62

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
           +H R GT+++K     I    I  ++ + +I    ++    A  I  L +GI  L +  L
Sbjct: 63  KHLRQGTLSLKFTLYVILAGAIGVIIGANLILSFPENIAEAALGILILCLGIYSLMKKEL 122

Query: 148 YCERKFPDNYVK--YIWGM---VTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
                     +K  +I G+   + G L+G+L  G G+F  L L+ ++G +  +A A
Sbjct: 123 GQNENAIHRDIKGMFIGGLGLAIIGILNGSLTAGTGLFVTLFLIRWFGFNYKQAVA 178


>gi|193077401|gb|ABO12209.2| hypothetical protein A1S_1782 [Acinetobacter baumannii ATCC 17978]
          Length = 267

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 7/173 (4%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMH---VAMGTSLGVIAPTSVMSFM 87
           LSG  + LFG GGG V VP+L     Q    + +I +H   +A+ TS  V+  ++  +  
Sbjct: 11  LSGITTWLFGFGGGFVAVPLLYTVIIQKWSNESNIGIHAMQIAVATSAFVMLCSASFAVF 70

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            H R G I+ + ++     + +  +V ++  S  + ++L   F  +  +  +    R   
Sbjct: 71  RHYRSGHIDWQKIRFLWGGIALGGIVGAVTASLFNGNWLRWIFMGYVFITILDCYYRPGF 130

Query: 148 YCERKFPDNY---VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
               +   +Y    + I G + G+++  LGVGG + T  L+   G+S+ +A A
Sbjct: 131 IVTSRQKQHYGQNSELIKGGIIGWVAALLGVGGSVMTVPLLRRRGSSMAEAAA 183


>gi|297567502|ref|YP_003686474.1| hypothetical protein Mesil_3139 [Meiothermus silvanus DSM 9946]
 gi|296851951|gb|ADH64966.1| protein of unknown function DUF81 [Meiothermus silvanus DSM 9946]
          Length = 280

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 101/232 (43%), Gaps = 46/232 (19%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +++  LI + S L+G +  L G+GGG+++VP+L   F+       + +H A+G SL  + 
Sbjct: 4   LEFSLLIFLGSLLAGGVGALTGLGGGVILVPLLVLGFK-------VDLHYALGASLISVI 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH----VDKSFLNKAFAIFCL 135
            TS  +   + R G  N++I    +F L + T + +L+ +H    + KS++   F +  L
Sbjct: 57  ATSSGAASAYVREGYSNLRI---GMF-LEVATTLGALLGAHLVGILPKSWVATVFGVALL 112

Query: 136 LMGILMLK---RD-------------RLYCERKFPDNY------VKYIWG-----MVTGF 168
                  +   +D             RL  E  +P         V  + G      V G 
Sbjct: 113 YSAFQSFQDRYKDGQPSTVPSDPLAVRLRMESTYPTPQGLQPYTVHRVLGGFSLMGVAGM 172

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSA----GVSALIAFPALLVRIY 216
           LSG LG+G G    L M       YK + T++    GV+A  +    L R Y
Sbjct: 173 LSGLLGIGSGAVKVLAMERVMGLPYKVSTTTSNFMIGVTAAASAGVYLSRGY 224


>gi|53804555|ref|YP_113574.1| hypothetical protein MCA1104 [Methylococcus capsulatus str. Bath]
 gi|53758316|gb|AAU92607.1| putative membrane protein [Methylococcus capsulatus str. Bath]
          Length = 301

 Score = 45.1 bits (105), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 8/118 (6%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G L+GL G GGG ++VP    A  L+G    + MH A+ TSL V+A  S+ + + +  H 
Sbjct: 146 GALTGLVGAGGGFMVVP----ALNLLG---RLPMHAAVATSLMVVAMNSLAALLGYGGHV 198

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
            +   +           +VV   + +HV  + L + F  F  L+ + +L R+ L  ER
Sbjct: 199 QVRYDLAGPIAGAAVGGSVVGGWLAAHVGGTTLRRMFGGFVALIAVFLLYRE-LTPER 255


>gi|260553946|ref|ZP_05826212.1| permease [Acinetobacter sp. RUH2624]
 gi|260404900|gb|EEW98404.1| permease [Acinetobacter sp. RUH2624]
          Length = 274

 Score = 45.1 bits (105), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 7/173 (4%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMH---VAMGTSLGVIAPTSVMSFM 87
           LSG  + LFG GGG V VP+L     Q    + S+ +H   +A+ TS  V+  ++  +  
Sbjct: 16  LSGVTTWLFGFGGGFVAVPLLYAVIIQKWSSESSVGIHAMQIAVATSAFVMLCSASFATF 75

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            H R G I+ + +      +    +V ++M S  + ++L   F  +  +  +    R   
Sbjct: 76  RHYRSGHIDWQKINFLWGGIAFGGIVGAVMASLFNGNWLRWIFMGYVFITILDCYYRPGF 135

Query: 148 YCERKFPDNY---VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
               K   ++    + I G + G+++  LGVGG + T  ++   G+S+ +A A
Sbjct: 136 MVASKQKQDHGQNSELIKGGIIGWVAALLGVGGSVMTVPMLRRRGSSMAEAAA 188


>gi|303243462|ref|ZP_07329804.1| protein of unknown function DUF81 [Methanothermococcus okinawensis
           IH1]
 gi|302486023|gb|EFL48945.1| protein of unknown function DUF81 [Methanothermococcus okinawensis
           IH1]
          Length = 275

 Score = 45.1 bits (105), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 119/245 (48%), Gaps = 28/245 (11%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++VPVL   F  +GI   I + +A+GTSL VI  TS+    +H    ++N  ++  +  +
Sbjct: 30  IIVPVLIYLFDFIGIPTDISVKMAVGTSLFVIFLTSLAGAHKH----SLNKNVIWKYSLI 85

Query: 107 LPI-----TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD-------RLYCERKFP 154
           L +     + V  ++++ ++  +     F IF + + + +L  +        +   R   
Sbjct: 86  LGLFGIFGSIVGVNIVVGYLSGNLHKMLFGIFLIFVSLHILYSNFKNKNNLSIIENRNIS 145

Query: 155 DNYVKY----IWGMVTGFLSGALGVGGGI----FTNLLMLFYGASIYKATATSAGVSALI 206
           D   K     + G +TGFLS   G+GGGI    F N+ + F    I  A  TS G+  ++
Sbjct: 146 DIKCKCKDIGVVGFLTGFLSSVFGIGGGIIIVPFLNIFLKF---PIKSAIGTSLGMMIIV 202

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           +F  LL  ++S    N    +++G+V++   LII P +++ +    K++Y    + L I 
Sbjct: 203 SFVGLLGYMFSSCPFNQ-NIYNIGYVSLLTGLIISPTAMIFSKYGAKIAYKTKSESLRIV 261

Query: 267 FSMIM 271
            S+I+
Sbjct: 262 LSIIL 266


>gi|16082023|ref|NP_394445.1| hypothetical protein Ta0985 [Thermoplasma acidophilum DSM 1728]
 gi|10640300|emb|CAC12114.1| conserved hypothetical membrane protein [Thermoplasma acidophilum]
          Length = 255

 Score = 45.1 bits (105), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 26/179 (14%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGI--DDSICMHVAMGTSL--GVIAPTSVM-SFME 88
           G L+G+ G  G L++VP LS    +MG+   DS+      GTSL   VI  ++V+  +++
Sbjct: 15  GALTGITGSSGVLIVVPALS----IMGLSFQDSV------GTSLLVDVITTSTVIYVYLK 64

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
           ++    I   I+   I  L  T +   + IS V +  L  AFAI  +++ I M +R R +
Sbjct: 65  NKNIDIIPAVIM--GIGALVGTQIGIRIAIS-VSERPLEIAFAILTIILAIQMFRRSRGH 121

Query: 149 CER-KFPDNYVKYIW------GMVTGFLSGALGVGGGI-FTNLLMLFYGASIYKATATS 199
                    Y +  W       +  G L+G LG  GGI F  +LMLF+  S  K   T+
Sbjct: 122 KTSINGKKEYRRAAWVFAFLLSIPVGILTGTLGTSGGIMFIGILMLFFSLSAQKMVGTA 180


>gi|255534255|ref|YP_003094626.1| hypothetical protein FIC_00088 [Flavobacteriaceae bacterium
           3519-10]
 gi|255340451|gb|ACU06564.1| conserved hypothetical transmembrane protein [Flavobacteriaceae
           bacterium 3519-10]
          Length = 266

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 22/139 (15%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           L K   V+Y  +++    L G ++GL G GGG ++VP L     L+G++    M  A+ T
Sbjct: 136 LRKYDEVNY-TILVSQGLLVGIVTGLIGAGGGFLIVPAL---VMLLGLN----MKKAVAT 187

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILK-DWIFVLPITTV-VTSLMI-----SHVDKSFL 126
           SL +IA  S++ F+         MKI+K DW+F+L  T++ V  + I       +D   L
Sbjct: 188 SLFIIAMNSLIGFLS-------TMKIVKHDWVFLLSFTSLSVIGIFIGLALSKRMDGRKL 240

Query: 127 NKAFAIFCLLMGILMLKRD 145
              F    L MG+ ++ ++
Sbjct: 241 KPLFGWIVLAMGLFIIVKE 259


>gi|196038521|ref|ZP_03105830.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|196030929|gb|EDX69527.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
          Length = 251

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 119/269 (44%), Gaps = 55/269 (20%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II+   + G L G  G GG   ++ +L+  F        I +HVA+ TSL  +A T++  
Sbjct: 3   IIITMLVMGILLGFVGDGGAGFIIAILTLVFH-------IPIHVALATSLTAMAFTTLSG 55

Query: 86  FMEHRRHGTINMKI---------LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            + H R G + + I         L  +     I + + SL+  H+   F      +  + 
Sbjct: 56  VISHYREGNVVLTIGGIVGGCGALGSY-----IGSKIGSLIPGHLLHWFTAGMLFLSAIF 110

Query: 137 MGILMLK----RDRLYCERK--FPDNYVKYI-WGMVTGFLSGALGVGGGIFTNL-LMLFY 188
           M I ++K     + L  E K    +N +K I  G+VTG ++G+ G+G   F  L LM+  
Sbjct: 111 MFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL 170

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
           G +I +    S G + L+  P     I  G G        LG+ + G +  IL + +LI 
Sbjct: 171 GLTIQQ----SVGTTMLVILP-----IAIGGG--------LGYSSEGYLDHILLLQVLI- 212

Query: 249 PLATKLSYMIGKKY------LTIGFSMIM 271
              T L   IG K+      + + FSMIM
Sbjct: 213 --GTMLGAYIGAKFTNYAPRMLLKFSMIM 239


>gi|163787704|ref|ZP_02182151.1| hypothetical protein FBALC1_04157 [Flavobacteriales bacterium
           ALC-1]
 gi|159877592|gb|EDP71649.1| hypothetical protein FBALC1_04157 [Flavobacteriales bacterium
           ALC-1]
          Length = 265

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 20/137 (14%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
            +D   +Y  LI +   + G L+G+ G GGG +++P L    +L        M  A+GTS
Sbjct: 141 EQDIHYNY-PLIAIEGVVVGILTGIVGAGGGFLIIPALVLLAKL-------PMKKAVGTS 192

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI------SHVDKSFLNK 128
           L +IA  S++ F+        N++I  DW F+L  TT+    +I        +    L K
Sbjct: 193 LLIIAAKSLIGFLGDLS----NIEI--DWSFLLIFTTISIFGIILGVYASKFISGKKLKK 246

Query: 129 AFAIFCLLMGILMLKRD 145
            F  F LLM I +L ++
Sbjct: 247 GFGYFTLLMAIYILYKE 263


>gi|260907021|ref|ZP_05915343.1| integral membrane protein [Brevibacterium linens BL2]
          Length = 265

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 14/188 (7%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
           FG GGG V VP+++     +G D +    VA  TS  V+   +V+S +  +R    ++K 
Sbjct: 20  FGFGGGFVTVPIITLVHADLGSDTA---RVAAATSALVMLVNAVVSTLSTKRETLAHLK- 75

Query: 100 LKDWIFVL-PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE--RKFPDN 156
            + W+F+L        +       +  L   F I+  +  I +L R   +     K  D 
Sbjct: 76  GEWWLFILLAAGGAFGAFCAKFAPEPLLKWGFVIYIAVTAIDLLARPGFFRRGGAKVRDE 135

Query: 157 Y-------VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
                   +  ++G   G L+  LGVGG + T  +M   G+++  AT  +  ++ +I  P
Sbjct: 136 NLSDGGRGIAALFGFPIGGLASFLGVGGSVMTVPMMRRSGSTMTVATTLANPLTLVIMLP 195

Query: 210 ALLVRIYS 217
           A+LV I +
Sbjct: 196 AVLVTITT 203


>gi|254168110|ref|ZP_04874957.1| conserved domain protein, putative [Aciduliprofundum boonei T469]
 gi|197622876|gb|EDY35444.1| conserved domain protein, putative [Aciduliprofundum boonei T469]
          Length = 254

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 3/152 (1%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           + A+ + L +   +S ++   ++    ++ KI++  + VL   + + +    ++    L 
Sbjct: 49  YFALASPLPMTLISSSIALKRYQSEKLVDWKIVEKMLVVLIPGSFIGAYATKYISGKILM 108

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDN-YVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
              A+F + + I ++       ERK     +V  + G V G LSG L  GGGI    +++
Sbjct: 109 MLTAVFLVYIAIRLIISGS--KERKMEKRMWVILLAGFVIGLLSGLLANGGGILIVPILV 166

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             G SI KA  +S  +    A P++LV  Y G
Sbjct: 167 LLGMSIKKAIGSSVAMVLFAAIPSILVHWYLG 198


>gi|167772382|ref|ZP_02444435.1| hypothetical protein ANACOL_03759 [Anaerotruncus colihominis DSM
           17241]
 gi|167665485|gb|EDS09615.1| hypothetical protein ANACOL_03759 [Anaerotruncus colihominis DSM
           17241]
          Length = 116

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 8/116 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IV    +G L+GLFG GGG+V+VP+L +        D +    A  TS+ VI P S+ S 
Sbjct: 7   IVTGAAAGLLNGLFGAGGGMVVVPMLQR--------DGLSAQRAHATSIAVILPLSIASS 58

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +   G I++     +I        + +L++  +   +L++ F    L   + +L
Sbjct: 59  LLYLTRGYIDLAAAARFIPFGLFGAWLGTLLLPRIKTVWLHRIFGAIVLYSAVRLL 114


>gi|152997953|ref|YP_001342788.1| hypothetical protein Mmwyl1_3956 [Marinomonas sp. MWYL1]
 gi|150838877|gb|ABR72853.1| protein of unknown function DUF81 [Marinomonas sp. MWYL1]
          Length = 256

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 21/232 (9%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ VPVL  A    G+  +     A+ T+       +V +     + G + +  +  
Sbjct: 32  GGGLITVPVLLAA----GLSPA----EALATNKLQGCAGTVSASYHFIKKGQVKLSDMWL 83

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI--LMLKRDRLYCERKFPDNYVKY 160
            I +  I  +  +L++S++D S L KA  I  + + I    L + + Y   KF   ++++
Sbjct: 84  PILMTAIGAICGTLLVSYLDSSLLLKAVPIILIAVAIFFFFLPKVQPYIASKFSLTHIQF 143

Query: 161 --IWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
             I G   GF  G +G G G  F+   +   G ++  ATA +  ++A     +L +  +S
Sbjct: 144 AVIIGTSIGFYDGLIGPGTGAFFSTAYLCLMGLTVVSATAHTKVLNATSNLASLAMFAFS 203

Query: 218 G---WGLN---GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           G   W L    G+  W  G   IG+ L+I   + LI P+   +   I  K L
Sbjct: 204 GHLIWALGIVMGIGQW-FG-AQIGSRLVITKGAKLIRPMVIIMCLAISVKLL 253


>gi|30248483|ref|NP_840553.1| hypothetical protein NE0467 [Nitrosomonas europaea ATCC 19718]
 gi|30138369|emb|CAD84378.1| Domain of unknown function DUF81 [Nitrosomonas europaea ATCC 19718]
          Length = 259

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 22/174 (12%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A  L+G + GL GVGGG +M P+L   F +  +        A+ T L   A T +     
Sbjct: 9   AGALTGFVIGLTGVGGGALMTPILLLVFGVQPVT-------AVATDLWFAAITKIAGARV 61

Query: 89  HRRHGTINMKILKD-WIFVLPITTVVTSL--MISHVDK-SFLNKAFAIFCLLMGILMLKR 144
           H  +G ++ +++K  W   LP+  +V  L  M +H+ K  +L K   I  L+  I +L  
Sbjct: 62  HHTNGNVDWQVVKRLWSGSLPMALLVVLLVSMGTHITKVDWLTKGIGIVVLITAIGLLTA 121

Query: 145 DRLYC-ERK----FPDNY------VKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
            R+    RK     P+ +      +  I G + G       VG G+  ++++L+
Sbjct: 122 PRMVALARKKRTGQPERFETMQSILTVIAGAILGVCVALTSVGAGVLGSVMLLY 175


>gi|229128946|ref|ZP_04257921.1| hypothetical protein bcere0015_33900 [Bacillus cereus BDRD-Cer4]
 gi|229146239|ref|ZP_04274614.1| hypothetical protein bcere0012_33840 [Bacillus cereus BDRD-ST24]
 gi|228637298|gb|EEK93753.1| hypothetical protein bcere0012_33840 [Bacillus cereus BDRD-ST24]
 gi|228654491|gb|EEL10354.1| hypothetical protein bcere0015_33900 [Bacillus cereus BDRD-Cer4]
          Length = 245

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV----TSLMISH 120
           I +HVA+ TSL  +A T++   + H R G + + I         I + +     SL+ +H
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 88

Query: 121 VDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKFPDNY-VKYI-WGMVTGFLSGAL 173
           +   F        AIF  +  I+   +++  LY  ++F  NY +K I  G+VTG ++G+ 
Sbjct: 89  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKEFSMNYLLKCICLGLVTGMMAGSF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I +    S G + L+  P     I  G G        LG+ 
Sbjct: 149 GIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----IAIGGG--------LGYS 191

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           + G +  IL + +LI    T L   IG K+      + + FSMIM
Sbjct: 192 SEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRMLLRFSMIM 233


>gi|258424390|ref|ZP_05687270.1| conserved hypothetical protein [Staphylococcus aureus A9635]
 gi|257845403|gb|EEV69437.1| conserved hypothetical protein [Staphylococcus aureus A9635]
          Length = 275

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V +FL G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 VTTFLIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSI 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIAQGHV 223



 Score = 36.2 bits (82), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 20/147 (13%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           G+  +I   VA+GTS  ++  T + S + + +   +++K    ++F L   +++ S +  
Sbjct: 42  GLLHNITTQVAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLLGSFISR 101

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRD-----RLYCERKFPDNYVK--------------- 159
           ++     N  F IF + + IL++ R+     +++ + K+   YV                
Sbjct: 102 YLTFESFNLYFGIFLIFVAILLMIRNKIKPFKIFDKPKYEKTYVDAKGKTYHYSVPPLFA 161

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLML 186
           ++   + G L+G  G+GGG     LML
Sbjct: 162 FVTTFLIGILTGLFGIGGGALMTPLML 188


>gi|21322817|dbj|BAB97446.1| Hypothetical membrane protein [Corynebacterium glutamicum ATCC
           13032]
          Length = 263

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 19/123 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++V   + G ++GL G GGG ++VP    A  L+G    + M VA+GTSL VI   S   
Sbjct: 149 VLVDGLVVGAVTGLVGAGGGFLVVP----ALALLG---GLSMPVAVGTSLVVITMKSFAG 201

Query: 86  FMEHRRHGTINMKILKDWIFVLPIT------TVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              +         +  DW  VL +T      ++  S +   V ++ L K F +F L+MG+
Sbjct: 202 LAGYL------TSVQLDWGLVLMVTAAAIVGSLAGSRLAGRVPETLLRKGFGVFVLVMGV 255

Query: 140 LML 142
            +L
Sbjct: 256 FVL 258


>gi|77359698|ref|YP_339273.1| hypothetical protein PSHAa0747 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76874609|emb|CAI85830.1| conserved protein of unknown function ; putative membrane protein
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 269

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 23/221 (10%)

Query: 49  VPVLSK---AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           VPVLS    AF +  +++ +   +A+ TSL  I  TS  S + H ++  +   ++  W+ 
Sbjct: 34  VPVLSALLLAFNVTAVENVLV--IAIATSLASILFTSTSSALAHHKNDNVPW-VIAPWVM 90

Query: 106 V-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKYIW 162
             + I  +++    S + +  L   FA+  + + + M+   R++   E+  P        
Sbjct: 91  SGVAIGALISGFAASLIPEQILRTVFAVSVVFIALRMVLSARNKPLSEKPLPS------- 143

Query: 163 GMVTGFLSGALGVGGGIFTNL-------LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
           G + G L   +G   G+           L+ ++   I KA   +A    +IAF   +  I
Sbjct: 144 GPILGSLCAIMGALSGLIGIGGGALIVPLLHYFSVDIKKAIGCAAACGIVIAFFGSIGYI 203

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            +GW +  L     GFV + A+  I+  S  I P+  K ++
Sbjct: 204 SAGWQVTDLEHGFAGFVYLPALFGIVITSWFIAPIGAKATH 244


>gi|228938664|ref|ZP_04101269.1| hypothetical protein bthur0008_13280 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228971545|ref|ZP_04132169.1| hypothetical protein bthur0003_13230 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978156|ref|ZP_04138534.1| hypothetical protein bthur0002_13590 [Bacillus thuringiensis Bt407]
 gi|229069104|ref|ZP_04202396.1| hypothetical protein bcere0025_13110 [Bacillus cereus F65185]
 gi|229078735|ref|ZP_04211289.1| hypothetical protein bcere0023_13980 [Bacillus cereus Rock4-2]
 gi|229149750|ref|ZP_04277980.1| hypothetical protein bcere0011_13080 [Bacillus cereus m1550]
 gi|228633781|gb|EEK90380.1| hypothetical protein bcere0011_13080 [Bacillus cereus m1550]
 gi|228704608|gb|EEL57040.1| hypothetical protein bcere0023_13980 [Bacillus cereus Rock4-2]
 gi|228714049|gb|EEL65932.1| hypothetical protein bcere0025_13110 [Bacillus cereus F65185]
 gi|228781628|gb|EEM29828.1| hypothetical protein bthur0002_13590 [Bacillus thuringiensis Bt407]
 gi|228788204|gb|EEM36159.1| hypothetical protein bthur0003_13230 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228821040|gb|EEM67060.1| hypothetical protein bthur0008_13280 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 281

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 110/221 (49%), Gaps = 39/221 (17%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           +YN   + +L +  +++YI L+ +   ++GT+  L G+GGG+++VP+      L+G+  S
Sbjct: 1   MYNNWWISYLEELAILEYIMLLFIG-LIAGTVGSLVGLGGGIIIVPL------LIGL-HS 52

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +   +A+GTS+  +  T + S + + +H  ++ K       +L I +    ++ S  +K 
Sbjct: 53  LSPQLAVGTSMVTVVFTGLSSTLTYMKHKRVDYKSG----LILFIGSGPGGIIGSWANK- 107

Query: 125 FLNKA-----FAIFCLLMGILMLKRDRL---------YCERKFPDN-----------YVK 159
           FLN+      F IF + + IL++ RD+L           +R F DN           ++ 
Sbjct: 108 FLNQDTFSLYFGIFLIFVSILLMLRDKLKPLSLSNTSVIKRSFTDNDGNTVHYQFPPFLA 167

Query: 160 YIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
                + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 168 IFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 208



 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 166 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 218

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 219 SSATHISLGNVS------WIYAL 235


>gi|330968149|gb|EGH68409.1| hypothetical protein PSYAC_26631 [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 248

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 16/134 (11%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           GTL GLFG+ GGLV +P L   F   G+D      +A GT+L ++ P  +++   + +  
Sbjct: 15  GTLGGLFGIDGGLVAIPALGVLF---GLDQ----QLAQGTALLMVLPNVLLALWRYNQRN 67

Query: 94  TINMKILKDWIFVLP--ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
            I ++     + ++P  I   +TS++   +D   +   F  F +++ +  +   ++Y   
Sbjct: 68  RILLR--NALMLIIPSFIFAWLTSMLAVRIDPQSMRLGFVAFLVILTVFNVA--QMYWRN 123

Query: 152 KFPD---NYVKYIW 162
                   + KY+W
Sbjct: 124 TLASGGLRHEKYLW 137


>gi|253732723|ref|ZP_04866888.1| hypothetical membrane Spanning protein [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|253729334|gb|EES98063.1| hypothetical membrane Spanning protein [Staphylococcus aureus
           subsp. aureus TCH130]
          Length = 275

 Score = 44.7 bits (104), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V +FL G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 VTTFLIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSI 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIAQGHV 223



 Score = 36.2 bits (82), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 20/147 (13%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           G+  +I   VA+GTS  ++  T + S + + +   +++K    ++F L   +++ S +  
Sbjct: 42  GLLHNITTQVAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLLGSFISR 101

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRD-----RLYCERKFPDNYVK--------------- 159
           ++     N  F IF + + IL++ R+     +++ + K+   YV                
Sbjct: 102 YLTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKTYHYSVPPLFA 161

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLML 186
           ++   + G L+G  G+GGG     LML
Sbjct: 162 FVTTFLIGILTGLFGIGGGALMTPLML 188


>gi|30021770|ref|NP_833401.1| hypothetical protein BC3673 [Bacillus cereus ATCC 14579]
 gi|296504173|ref|YP_003665873.1| hypothetical protein BMB171_C3343 [Bacillus thuringiensis BMB171]
 gi|29897326|gb|AAP10602.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579]
 gi|296325225|gb|ADH08153.1| hypothetical protein BMB171_C3343 [Bacillus thuringiensis BMB171]
          Length = 251

 Score = 44.7 bits (104), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV----TSLMISH 120
           I +HVA+ TSL  +A T++   + H R G + + I         I + +     SL+ +H
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 94

Query: 121 VDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKFPDNY-VKYI-WGMVTGFLSGAL 173
           +   F        AIF  +  I+   +++  LY  ++F  NY +K I  G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKEFSMNYLLKCICLGLVTGMMAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I +    S G + L+  P     I  G G        LG+ 
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----IAIGGG--------LGYS 197

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           + G +  IL + +LI    T L   IG K+      + + FSMIM
Sbjct: 198 SEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRMLLRFSMIM 239


>gi|323465443|gb|ADX77596.1| conserved membrane protein, putative [Staphylococcus
           pseudintermedius ED99]
          Length = 249

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 38/190 (20%), Positives = 95/190 (50%), Gaps = 3/190 (1%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           + G LSG+ G+GG +++ P L     ++G+  S   ++A G +   +  +++ S +  R+
Sbjct: 12  IGGILSGMVGIGGAIIIYPALLIIPPMLGL-PSYNAYIASGLTSAQVFFSTLSSSIRARQ 70

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
               ++K++      + I + + + +   + + F+N  + +  +L  +L++ + +   E 
Sbjct: 71  TPDFSLKLILWMGSSMLIGSALGATIAEVLTERFVNSVYVVIAILALVLIMIKIKPQTEA 130

Query: 152 KFP-DNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFP 209
                  V  + G+V G +SG +G GG  I   +L++F+   ++   A S  ++ + +  
Sbjct: 131 NLKFSKVVLLLTGLVIGAISGVIGAGGAFIIIPVLLVFFKIPMHTVVANSVVIAFISSIG 190

Query: 210 ALLVRIYSGW 219
           A + +++ G+
Sbjct: 191 AFMFKLFQGY 200


>gi|300693177|ref|YP_003749150.1| hypothetical protein RPSI07_mp0142 [Ralstonia solanacearum PSI07]
 gi|299075214|emb|CBJ34501.1| conserved membrane protein of unknown function, DUF81 [Ralstonia
           solanacearum PSI07]
          Length = 262

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 21/154 (13%)

Query: 58  LMGIDDSICMHVAMGTSLGVIAPTSVMSFME-HRRHGTINMKILKDWIFVLPITTVVTSL 116
           L G+D     H+A GT+L +IAP  ++ F+  H+RH      +     F + ++T V + 
Sbjct: 41  LYGMDQ----HLAQGTALVMIAPNVLIGFLRYHQRHPVPLRSVATLCAFAM-VSTYVAAR 95

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLK--RDRLYCE-----------RKFPDNYVKYIWG 163
             + +D   L+ AFA F +++ +      RD+ + +           R  P   +  + G
Sbjct: 96  FAAGLDADHLHTAFAWFLIVLAVYFASQLRDKAHPDPAAGHPAPEAPRAVPPAALPLL-G 154

Query: 164 MVTGFLSGALGVGGG-IFTNLLMLFYGASIYKAT 196
           + +G +SG   VGGG +    L+  +G S  +A 
Sbjct: 155 IASGGMSGIFTVGGGLVVVPALVTLFGMSQTRAQ 188


>gi|315230493|ref|YP_004070929.1| hypothetical protein TERMP_00729 [Thermococcus barophilus MP]
 gi|315183521|gb|ADT83706.1| hypothetical protein TERMP_00729 [Thermococcus barophilus MP]
          Length = 254

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 9/139 (6%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G L+ LFG+GGG ++VP L+    L+G++    +H A+GTS   +  TS+ S + + R  
Sbjct: 15  GILAALFGLGGGFLIVPTLN----LLGVE----IHHAVGTSSAAVVFTSLSSALAYSRQK 66

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY-CERK 152
            ++ K+         I   + + M S ++ + L   F    +L+ I + ++      E K
Sbjct: 67  RVHYKVGLLLASTAIIGAYIGAWMTSLLNPAQLKVIFGATLILVAIRIYRKKTAEPSEVK 126

Query: 153 FPDNYVKYIWGMVTGFLSG 171
             D  + Y    V GF +G
Sbjct: 127 LEDVKINYKLVPVGGFFAG 145


>gi|229016806|ref|ZP_04173736.1| hypothetical protein bcere0030_13740 [Bacillus cereus AH1273]
 gi|228744542|gb|EEL94614.1| hypothetical protein bcere0030_13740 [Bacillus cereus AH1273]
          Length = 281

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 126/264 (47%), Gaps = 51/264 (19%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           +YN   + ++ +  +++YI L+ +   ++GT+  L G+GGG+++VP+      L+G+  S
Sbjct: 1   MYNDWWISYIEELAILEYIMLLFIG-LIAGTVGSLVGLGGGIIIVPL------LIGL-HS 52

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +   +A+GTS+  +  T + S + + +H  ++ K       +L I +    ++ S  +K 
Sbjct: 53  LSPQLAVGTSMVTVVFTGLASTLTYMKHKRVDYKSG----LILFIGSGPGGIIGSWANK- 107

Query: 125 FLNKA-----FAIFCLLMGILMLKRDRL---------YCERKFPDN-----------YVK 159
           FLN+      F IF + + IL++ RD+L           +R F DN           ++ 
Sbjct: 108 FLNQDTFSLYFGIFLIFVSILLILRDKLKPLSLSNMTVIKRSFTDNEGNTVDYQFPPFLA 167

Query: 160 YIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
                + GF+SG  G+GGG +    +ML +    + A ATS  +  L A  + L  I   
Sbjct: 168 IFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATSMFIVFLSAIVSSLTHI--- 224

Query: 219 WGLNGLPPWSLGFVNIGAVLIILP 242
                    SLG V+    LI++P
Sbjct: 225 ---------SLGNVSWAYALILIP 239


>gi|307130257|ref|YP_003882273.1| hypothetical protein Dda3937_00781 [Dickeya dadantii 3937]
 gi|306527786|gb|ADM97716.1| putative membrane protein [Dickeya dadantii 3937]
          Length = 254

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 16/135 (11%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G+   +  H+A GT+L +I P  ++ F+ +R+   I+ ++         ++    
Sbjct: 34  AIPVLGMLFGMNQHLAQGTALIMITPNVLIGFLRYRQRNKIDTRMTLMLCAFATVSAYFA 93

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILML------KRDR----LYCERKFPDNYVKYIWGM 164
           + + S +    L +AFAIF L++    +      +R R    +  +R  P        G+
Sbjct: 94  AHIASAIQVDNLQQAFAIFLLVLATYYIWQWINSRRSRTPTSVLSKRYLPA------LGV 147

Query: 165 VTGFLSGALGVGGGI 179
            +GF+SG   VGGG+
Sbjct: 148 ASGFMSGIFTVGGGL 162


>gi|254420418|ref|ZP_05034142.1| conserved domain protein, putative [Brevundimonas sp. BAL3]
 gi|196186595|gb|EDX81571.1| conserved domain protein, putative [Brevundimonas sp. BAL3]
          Length = 264

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 7/117 (5%)

Query: 58  LMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM 117
           L+G+ D    H+A+GTS   +A  +  + + H RHGT+  KI   +     +  V+ S +
Sbjct: 40  LVGVKDP---HLAIGTSAFAVAANAFANLLNHARHGTVKWKIAGLFALAGVLGAVLGSTL 96

Query: 118 ISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF---PDNYVKYIW-GMVTGFLS 170
              VD   L   FA+  L++G LML+      +      P N  K I  G++TG +S
Sbjct: 97  GKAVDGQKLLALFAVLMLIVGALMLRGRSAAGDPDVVLTPGNAPKLIGTGVLTGVMS 153


>gi|319891377|ref|YP_004148252.1| hypothetical protein SPSINT_0087 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161073|gb|ADV04616.1| hypothetical protein SPSINT_0087 [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 249

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 38/190 (20%), Positives = 95/190 (50%), Gaps = 3/190 (1%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           + G LSG+ G+GG +++ P L     ++G+  S   ++A G +   +  +++ S +  R+
Sbjct: 12  IGGILSGMVGIGGAIIIYPALLIIPPMLGL-PSYNAYIASGLTSAQVFFSTLSSSIRARQ 70

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
               ++K++      + I + + + +   + + F+N  + +  +L  +L++ + +   E 
Sbjct: 71  TPDFSLKLILWMGSSMLIGSALGATIAEVLTERFVNSVYVVIAILALVLIMIKIKPQTEA 130

Query: 152 KFP-DNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFP 209
                  V  + G+V G +SG +G GG  I   +L++F+   ++   A S  ++ + +  
Sbjct: 131 NLKFSKVVLLLTGLVIGAISGVIGAGGAFIIIPVLLVFFKIPMHTVVANSVVIAFISSIG 190

Query: 210 ALLVRIYSGW 219
           A + +++ G+
Sbjct: 191 AFMFKLFQGY 200


>gi|163754008|ref|ZP_02161131.1| hypothetical protein KAOT1_20337 [Kordia algicida OT-1]
 gi|161326222|gb|EDP97548.1| hypothetical protein KAOT1_20337 [Kordia algicida OT-1]
          Length = 265

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 18/127 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI++   + G ++G+ G GGG +++P L        +  ++ M VA+GTSL +IA  S++
Sbjct: 146 LILIEGLVVGAITGMIGAGGGFLIIPALV-------LLANVEMKVAVGTSLIIIAFKSLL 198

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTV------VTSLMISHVDKSFLNKAFAIFCLLMG 138
            F+       + M+I  DW F+   T +      + S + + VD   L K F  F  +M 
Sbjct: 199 GFL---LGDALTMEI--DWEFLTIFTAISLVGIFIGSYLGNFVDGKKLKKGFGYFIFVMA 253

Query: 139 ILMLKRD 145
           I +   +
Sbjct: 254 IFIFYME 260


>gi|163941277|ref|YP_001646161.1| hypothetical protein BcerKBAB4_3359 [Bacillus weihenstephanensis
           KBAB4]
 gi|163863474|gb|ABY44533.1| protein of unknown function DUF81 [Bacillus weihenstephanensis
           KBAB4]
          Length = 251

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 12/147 (8%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G +   I         + + + S   S +  +
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVVSHYREGNVVFVIGGIVGGFGAMGSFIGSKFGSLIPAN 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKF----------PDNYVKYIW-GMVTGFLSGAL 173
            L+   A    L  I M  R  ++ +R             DN +K I+ G+VTG L+GA 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIRLIMFQKRSQSSLKGHKELSKDNLIKCIFLGLVTGILAGAF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATS 199
           G+G   F  L LM+  G +I ++  T+
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIRQSVGTT 181


>gi|291279735|ref|YP_003496570.1| hypothetical protein DEFDS_1353 [Deferribacter desulfuricans SSM1]
 gi|290754437|dbj|BAI80814.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 273

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 45/227 (19%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           S   G+GGG ++VPVL+  F+       + +HVA+ TSL  +   S  +  E+ + G  N
Sbjct: 17  SSFLGIGGGSIIVPVLTLVFK-------VPIHVAIATSLISVIFASSNASAEYIKKGLTN 69

Query: 97  MKILKDWIFVLPITT---VVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR------DRL 147
           +KI    +F+  +TT   V+  L+   +++ +L   F +  L+     +K       D +
Sbjct: 70  IKI---GLFLETVTTFFAVLGGLLSVSINEKYLFIMFGVVLLITAYFYIKNIVGKNSDLM 126

Query: 148 YCERK----FPDNY--------VKY---------IWGMVTGFLSGALGVGGGIFTNLLM- 185
              +     F  NY        + Y         +     G LSG LG+GGG+F    M 
Sbjct: 127 SSNKNSKSFFSGNYYDENLNKKITYTPQRLISTTVVSSTAGLLSGMLGIGGGVFKVPAMN 186

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           L     I  +T TS  + ++ A  A LV + +    N + P   GFV
Sbjct: 187 LISKIPIKVSTTTSNFMMSITAAAASLVYLKT----NLINPLIAGFV 229


>gi|253730433|ref|ZP_04864598.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253725817|gb|EES94546.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 251

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 50/238 (21%), Positives = 114/238 (47%), Gaps = 15/238 (6%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +V+ + ++++  F  G +SGL GVGG +++ P +     L G   +   ++A G +   +
Sbjct: 3   IVNIVIMLLIGVF-GGFISGLVGVGGAIIIYPAILLLPPLFG-APAYSAYIASGLTSSQV 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             +++   ++ R+    + +++      + I +++ + + +    +F+N  + I  LL  
Sbjct: 61  FFSTLSGSLKARKKTEFSPQLVLYMGGGMIIGSMLGAFLANLFHATFVNTVYIIIALLAL 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATA 197
            LM  + +   E+   + Y+  I G+  G +SG +G GG  I   +L++ +   +    A
Sbjct: 121 TLMFIKVKPSSEKSSFNKYLLVIIGLFIGIISGIVGAGGAFIIIPILLVLFKLPMNTVVA 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            S  ++ + +  A ++++  G+    +P +   F+ IG        SI+  P+  KLS
Sbjct: 181 NSIVIAFISSIGAFVIKLIQGY----IPLYDALFLIIG--------SIIFAPIGLKLS 226


>gi|228909494|ref|ZP_04073319.1| hypothetical protein bthur0013_36460 [Bacillus thuringiensis IBL
           200]
 gi|228850271|gb|EEM95100.1| hypothetical protein bthur0013_36460 [Bacillus thuringiensis IBL
           200]
          Length = 245

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 45/242 (18%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           ++ +L+  FQ       I +HVA+ TSL  +A T++   + H R G + + I        
Sbjct: 19  IIAILTLVFQ-------IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFG 71

Query: 108 PITTVV----TSLMISHVDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKFPDNY- 157
            I + +     SL+ +H+   F        AIF  +  I+   +++  LY  ++F  NY 
Sbjct: 72  AIGSYIGSKFGSLIPAHLLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKEFSVNYL 131

Query: 158 VKYI-WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
           +K +  G+VTG ++G+ G+G   F  L LM+  G +I +    S G + L+  P     I
Sbjct: 132 LKCVCLGLVTGMMAGSFGIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----I 182

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT------IGFSM 269
             G G        LG+ + G +  IL + +LI    T L   IG K+        + FSM
Sbjct: 183 AIGGG--------LGYSSEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRTLLRFSM 231

Query: 270 IM 271
           IM
Sbjct: 232 IM 233


>gi|297184080|gb|ADI20199.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
          Length = 263

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 19/128 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +II+   + G L+G+ G GGG +++P L    +L        M  A+GTSL +IA  S++
Sbjct: 147 VIIIEGAVVGVLTGIVGAGGGFLIIPALVLFAKL-------PMKKAVGTSLLIIAAKSLI 199

Query: 85  SFM-EHRRHGTINMKILKDWIFVLPITTV------VTSLMISHVDKSFLNKAFAIFCLLM 137
            F+ + +R+G        DW  +L +T +      +   + + +D   L K F  F LLM
Sbjct: 200 GFIGDVQRYGD-----QLDWTRLLTVTAIAVFGIFIGIYLNTFIDGKKLKKGFGWFVLLM 254

Query: 138 GILMLKRD 145
            + ++ + 
Sbjct: 255 AVYIIGKQ 262



 Score = 35.4 bits (80), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 37/196 (18%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +AS   G   GL G GG ++ VPVL   F        I + ++   SL ++  T+++  +
Sbjct: 7   IASIFIGISLGLIGSGGSILTVPVLVYLF-------GIGVEMSTAYSLFIVGSTALVGGV 59

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSL----------MISHVDKSFLNKAFAI---FC 134
            +   G +N K     +F +P    V +           +I  +    L K  AI   F 
Sbjct: 60  RNAFLGNVNYK--TAVVFTIPAFIAVYTTRAYLVPAIPSVIMTLGTYVLTKDIAIMVFFA 117

Query: 135 LLM---GILMLKRDRLYCERKFPDNYVKY-------IWGMVTGFLSGALGVGGG-IFTNL 183
           L+M    + M++  R    +K  +N V         I G V G L+G +G GGG +    
Sbjct: 118 LVMLAASVSMIRNKR----KKEEENAVPQLNLPVIIIEGAVVGVLTGIVGAGGGFLIIPA 173

Query: 184 LMLFYGASIYKATATS 199
           L+LF    + KA  TS
Sbjct: 174 LVLFAKLPMKKAVGTS 189


>gi|206968864|ref|ZP_03229819.1| permease [Bacillus cereus AH1134]
 gi|206735905|gb|EDZ53063.1| permease [Bacillus cereus AH1134]
 gi|326941388|gb|AEA17284.1| hypothetical protein CT43_CH3618 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 251

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           ++ +L+  FQ       I +HVA+ TSL  +A T++   + H R G + + I        
Sbjct: 25  IIAILTLVFQ-------IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFG 77

Query: 108 PITTVV----TSLMISHVDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKFPDNY- 157
            I + +     SL+ +H+   F        AIF  +  I+   +++  LY  ++F  NY 
Sbjct: 78  AIGSYIGSKFGSLIPAHLLHWFTAGMLFLSAIFMFIKLIMFQNKEKSSLYKHKEFSVNYL 137

Query: 158 VKYI-WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATS 199
           +K +  G+VTG ++G+ G+G   F  L LM+  G +I ++  T+
Sbjct: 138 LKCVCLGLVTGMMAGSFGIGSAPFIQLGLMVLLGLTIQQSVGTT 181


>gi|55980754|ref|YP_144051.1| hypothetical protein TTHA0785 [Thermus thermophilus HB8]
 gi|55772167|dbj|BAD70608.1| conserved hypothetical protein [Thermus thermophilus HB8]
          Length = 245

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 111/242 (45%), Gaps = 32/242 (13%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           VM+P++    +L         H A GTSL  +  T ++  + +   G+++ K        
Sbjct: 23  VMIPLMVGLLKL-------PQHRAHGTSLVAVFFTGLVGALTYGLQGSLDPKA----ALF 71

Query: 107 LPITTVVTS---LMISH-VDKSFLNKAFAIFCLLMGILMLKRDRL----YCERKFPDNYV 158
           L +T ++T+      +H + +  L ++F  F + +  L+L R  L        + P +  
Sbjct: 72  LALTAILTARFGARFAHGLSERNLKRSFGWFLIAVSFLLLLRPYLAPLGLVRGELPQDLA 131

Query: 159 KYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
             + G  TGFLSG +GVGGG I    ++L  G   +    T+ G S L   PA LV  ++
Sbjct: 132 LLLAGAFTGFLSGMMGVGGGTIMVPAMVLLLGMPQH----TAQGTSLLAMVPASLVGAHT 187

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                      LG V+    L ++P  ++ T L  +L++++ +  L + F+ ++  T + 
Sbjct: 188 --------HLRLGNVDQDLALGLVPGVLVGTFLGGELAHVLPEGALRLVFAAVLVWTGWR 239

Query: 278 FA 279
           +A
Sbjct: 240 YA 241



 Score = 42.7 bits (99), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 8/86 (9%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           L +  +   + L++  +F +G LSG+ GVGGG +MVP +     L+G+      H A GT
Sbjct: 121 LVRGELPQDLALLLAGAF-TGFLSGMMGVGGGTIMVPAM---VLLLGMPQ----HTAQGT 172

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKI 99
           SL  + P S++    H R G ++  +
Sbjct: 173 SLLAMVPASLVGAHTHLRLGNVDQDL 198


>gi|304406370|ref|ZP_07388026.1| protein of unknown function DUF81 [Paenibacillus curdlanolyticus
           YK9]
 gi|304344428|gb|EFM10266.1| protein of unknown function DUF81 [Paenibacillus curdlanolyticus
           YK9]
          Length = 273

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 28/200 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG---IDDSICMHVAMGTSLGVIAPT 81
           L IV   L G +S +FG   GL    ++  A  L+G   +   I    A+GTSL V+  T
Sbjct: 2   LEIVLLALLGLISAIFGSIVGLGGGIIIVPALTLLGPQLVGSEIDHATAVGTSLAVLIVT 61

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLP--ITTVVTSLMISHVDKSFLNKAFAIFCLLM-G 138
           ++ S M + +   ++ +    W+  +      ++ S +  H+       +F IF LLM G
Sbjct: 62  ALASTMAYSKKKRVDWR--SGWLLFMTSGPAAMIGSALTGHMSNGPFQLSFGIFMLLMAG 119

Query: 139 ILMLKRD------------RLYCERKFPDNYVKY------IWGMVTGFLSGALGVGGG-I 179
            L++ RD            R Y + K   ++  Y      + G   G +SG  G+GGG +
Sbjct: 120 -LLVARDYMKPISRQWPVVRTYTDDKGEQHHYGYAVLPALLVGFAVGLISGLFGIGGGSL 178

Query: 180 FTNLLMLFYGASIYKATATS 199
           F  +++L +    + ATATS
Sbjct: 179 FVPVMVLLFRFPPHVATATS 198


>gi|91225707|ref|ZP_01260736.1| hypothetical protein V12G01_06943 [Vibrio alginolyticus 12G01]
 gi|91189596|gb|EAS75871.1| hypothetical protein V12G01_06943 [Vibrio alginolyticus 12G01]
          Length = 268

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 4/216 (1%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+ +  F L GI D+  +H+A+GTS+  +  T++ S   H +   ++  ++   +  + +
Sbjct: 34  PIFAFLFSLQGIADTEVVHLALGTSMASMIVTTLGSMRAHYKKENVDSTMVVKMLSGVLV 93

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIW-GMVTG 167
            T   + + S++   +L   F++F L +   M L  +  Y     P   +  I  G V G
Sbjct: 94  GTFCATFVASYLQGVYLAGFFSVFMLYVAYKMFLNTENEYNPN--PHGAIGNITVGSVIG 151

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S  + + G       ++     + +A  TSA +   IA    L  + +GW        
Sbjct: 152 SVSALVSISGAGLIIPYLVQQNFEVKRAIGTSAAIGFPIALSGSLGYMLNGWENTDWNNL 211

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            LG++ + A++     S L T L  + +     K L
Sbjct: 212 VLGYIYLPAMISFSISSYLTTSLGVRCAEYFPNKVL 247


>gi|298694162|gb|ADI97384.1| probable membrane protein [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 275

 Score = 44.3 bits (103), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +FL G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 ITTFLIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSI 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIAQGHV 223



 Score = 36.6 bits (83), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 20/147 (13%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           G+  +I   +A+GTS  ++  T + S + + +   +++K    ++F L   +++ S +  
Sbjct: 42  GLLHNITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLLGSFISR 101

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRD-----RLYCERKFPDNYVK--------------- 159
           ++     N  F IF + + IL++ R+     +++ + K+   YV                
Sbjct: 102 YLTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKTYHYSVPPLFA 161

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLML 186
           +I   + G L+G  G+GGG     LML
Sbjct: 162 FITTFLIGILTGLFGIGGGALMTPLML 188


>gi|110835207|ref|YP_694066.1| hypothetical protein ABO_2346 [Alcanivorax borkumensis SK2]
 gi|110648318|emb|CAL17794.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 269

 Score = 44.3 bits (103), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 4/231 (1%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +V+VP L   F+ +G  D +   +A+ TSL  I  TS+ +   H + G +   +      
Sbjct: 30  VVIVPALIFLFRGLGFPDDLVAKMAVATSLSTIIVTSISAVRAHHKAGFVRWPVAVRLGV 89

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK----YI 161
            + +     + +   +    L + F +F +L+ + ML   R   +   P          +
Sbjct: 90  GIVLGAFAGAFIADAMKGELLTRLFGLFAMLIAVQMLLVGRKALDESLPQRVPGTPGLAL 149

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
            G++ G  S   G+GGG  T   + +    + +A A S+     IA    L    +GW  
Sbjct: 150 AGVLIGTGSSIFGIGGGSLTVPFLSWCRLKMQEAVAISSACGLPIAVAGTLGFAVAGWNE 209

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             LP  +LG+V + A + I+  S     L+ +LS+ +    L   F++++F
Sbjct: 210 QHLPEGALGYVFLPASVGIVLTSFPFARLSARLSHRLPSATLKKVFALVLF 260


>gi|82750538|ref|YP_416279.1| hypothetical protein SAB0789 [Staphylococcus aureus RF122]
 gi|82656069|emb|CAI80477.1| probable membrane protein [Staphylococcus aureus RF122]
          Length = 275

 Score = 44.3 bits (103), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +FL G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 ITTFLIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSI 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIAQGHV 223



 Score = 36.2 bits (82), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 20/147 (13%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           G+  +I   +A+GTS  ++  T + S + + +   +++K    ++F L   +++ S +  
Sbjct: 42  GLLRNITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLLGSFISR 101

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRD-----RLYCERKFPDNYVK--------------- 159
           ++     N  F IF + + IL++ R+     +++ + K+   YV                
Sbjct: 102 YLTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKTYHYSVPPLFA 161

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLML 186
           +I   + G L+G  G+GGG     LML
Sbjct: 162 FITTFLIGILTGLFGIGGGALMTPLML 188


>gi|323443784|gb|EGB01396.1| hypothetical protein SAO46_0207 [Staphylococcus aureus O46]
          Length = 275

 Score = 44.3 bits (103), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +FL G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 ITTFLIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSI 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIAQGHV 223



 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 20/147 (13%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           G+  +I   +A+GTS  ++  T + S + + +   +++K    ++F L   +++ S +  
Sbjct: 42  GLLHNITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLLGSFISR 101

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRD-----RLYCERKFPDNYVK--------------- 159
           ++     N  F IF + + IL++ R+     +++ + K+   YV                
Sbjct: 102 YLTFELFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKTYHYSVPPLFA 161

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLML 186
           +I   + G L+G  G+GGG     LML
Sbjct: 162 FITTFLIGILTGLFGIGGGALMTPLML 188


>gi|228990560|ref|ZP_04150525.1| hypothetical protein bpmyx0001_13220 [Bacillus pseudomycoides DSM
           12442]
 gi|228769086|gb|EEM17684.1| hypothetical protein bpmyx0001_13220 [Bacillus pseudomycoides DSM
           12442]
          Length = 281

 Score = 44.3 bits (103), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 39/221 (17%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           +YN   + +  +  +++YI L+ +   ++GT+  L G+GGG+++VP+      L+G+  S
Sbjct: 1   MYNECWISYTEELAILEYIMLLFIG-LIAGTVGSLVGLGGGIIIVPL------LIGL-HS 52

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +   +A+GTS+  +  T + S + + +H  ++ K       +L I +    ++ S  +K 
Sbjct: 53  LSPQLAVGTSIVTVVFTGLSSTLTYMKHKRVDYKSG----LILFIGSGPGGIIGSWANK- 107

Query: 125 FLNKA-----FAIFCLLMGILMLKRDRL---------YCERKFPDNYVKYIW-------- 162
           FLN+      F IF + + IL+L RD+L           +R F D+  K ++        
Sbjct: 108 FLNQDSFSLYFGIFLIFVSILLLLRDKLKPLSLSNATVIKRSFTDSEGKTVYYQFPPFLS 167

Query: 163 ---GMVTGFLSGALGVGGGI-FTNLLMLFYGASIYKATATS 199
                V GF+SG  G+GGG+     +ML +      A ATS
Sbjct: 168 IIIAFVVGFISGLFGIGGGVLLVPAMMLLFAFPAQIAVATS 208



 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 13/81 (16%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+ +F+ G +SGLFG+GGG+++VP +   F       +    +A+ TS+ ++  ++++S 
Sbjct: 168 IIIAFVVGFISGLFGIGGGVLLVPAMMLLF-------AFPAQIAVATSMFIVFLSAIVSS 220

Query: 87  MEHRRHGTINMKILKDWIFVL 107
           + H   G ++      WI+ L
Sbjct: 221 LTHISLGNVS------WIYAL 235


>gi|323440925|gb|EGA98633.1| hypothetical protein SAO11_0356 [Staphylococcus aureus O11]
          Length = 275

 Score = 44.3 bits (103), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +FL G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 ITTFLIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSI 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIAQGHV 223



 Score = 36.6 bits (83), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 20/147 (13%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           G+  +I   +A+GTS  ++  T + S + + +   +++K    ++F L   +++ S +  
Sbjct: 42  GLLHNITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLLGSFISR 101

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRD-----RLYCERKFPDNYVK--------------- 159
           ++     N  F IF + + IL++ R+     +++ + K+   YV                
Sbjct: 102 YLTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKTYHYSVPPLFA 161

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLML 186
           +I   + G L+G  G+GGG     LML
Sbjct: 162 FITTFLIGILTGLFGIGGGALMTPLML 188


>gi|302332536|gb|ADL22729.1| sulfite exporter TauE/SafE-like protein [Staphylococcus aureus
           subsp. aureus JKD6159]
          Length = 275

 Score = 44.3 bits (103), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +FL G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 ITTFLIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSI 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIAQGHV 223



 Score = 36.6 bits (83), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 20/147 (13%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           G+  +I   +A+GTS  ++  T + S + + +   +++K    ++F L   +++ S +  
Sbjct: 42  GLLHNITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLLGSFISR 101

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRD-----RLYCERKFPDNYVK--------------- 159
           ++     N  F IF + + IL++ R+     +++ + K+   YV                
Sbjct: 102 YLTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKTYHYSVPPLFA 161

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLML 186
           +I   + G L+G  G+GGG     LML
Sbjct: 162 FITTFLIGILTGLFGIGGGALMTPLML 188


>gi|282916172|ref|ZP_06323935.1| hypothetical protein SATG_01696 [Staphylococcus aureus subsp.
           aureus D139]
 gi|283769988|ref|ZP_06342880.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           H19]
 gi|282320120|gb|EFB50467.1| hypothetical protein SATG_01696 [Staphylococcus aureus subsp.
           aureus D139]
 gi|283460135|gb|EFC07225.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           H19]
          Length = 275

 Score = 44.3 bits (103), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +FL G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 ITTFLIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSI 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIAQGHV 223



 Score = 36.6 bits (83), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 20/147 (13%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           G+  +I   +A+GTS  ++  T + S + + +   +++K    ++F L   +++ S +  
Sbjct: 42  GLLHNITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLLGSFISR 101

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRD-----RLYCERKFPDNYVK--------------- 159
           ++     N  F IF + + IL++ R+     +++ + K+   YV                
Sbjct: 102 YLTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKTYHYSVPPLFA 161

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLML 186
           +I   + G L+G  G+GGG     LML
Sbjct: 162 FITTFLIGILTGLFGIGGGALMTPLML 188


>gi|124028506|ref|YP_001013826.1| hypothetical protein Hbut_1668 [Hyperthermus butylicus DSM 5456]
 gi|123979200|gb|ABM81481.1| universally conserved protein [Hyperthermus butylicus DSM 5456]
          Length = 255

 Score = 44.3 bits (103), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 18/190 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  V  + L+ V +   GTL    G+GGG +MVP    A  L+G+     + VA   SL 
Sbjct: 2   DVAVLAVPLVGVVAGFVGTL---LGIGGGAIMVP----ALVLLGVP----VKVAAPASLV 50

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I  TS+       R G +++ +         +  +V  + +  + + FL     I  ++
Sbjct: 51  AILGTSLGGIRRLFRRGLVDVMLAVFLETASGLGALVGVIAVGRLTEGFLRGLLGIVLIV 110

Query: 137 MGILMLKRDRLYC------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YG 189
            G L+L   R          R        +I  ++ GF S  LG+GGG+F   +++F  G
Sbjct: 111 SGFLLLTTRRKLSSTIEAYRRSIVRLIASWIVALMAGFASATLGIGGGVFKVPVLVFILG 170

Query: 190 ASIYKATATS 199
             +  A ATS
Sbjct: 171 LGLKHAVATS 180


>gi|228940756|ref|ZP_04103318.1| hypothetical protein bthur0008_33980 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228973675|ref|ZP_04134256.1| hypothetical protein bthur0003_34310 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228980232|ref|ZP_04140545.1| hypothetical protein bthur0002_34020 [Bacillus thuringiensis Bt407]
 gi|228779501|gb|EEM27755.1| hypothetical protein bthur0002_34020 [Bacillus thuringiensis Bt407]
 gi|228786034|gb|EEM34032.1| hypothetical protein bthur0003_34310 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228818907|gb|EEM64970.1| hypothetical protein bthur0008_33980 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 245

 Score = 44.3 bits (103), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           ++ +L+  FQ       I +HVA+ TSL  +A T++   + H R G + + I        
Sbjct: 19  IIAILTLVFQ-------IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFG 71

Query: 108 PITTVV----TSLMISHVDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKFPDNY- 157
            I + +     SL+ +H+   F        AIF  +  I+   +++  LY  ++F  NY 
Sbjct: 72  AIGSYIGSKFGSLIPAHLLHWFTAGMLFLSAIFMFIKLIMFQNKEKSSLYKHKEFSVNYL 131

Query: 158 VKYI-WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATS 199
           +K +  G+VTG ++G+ G+G   F  L LM+  G +I ++  T+
Sbjct: 132 LKCVCLGLVTGMMAGSFGIGSAPFIQLGLMVLLGLTIQQSVGTT 175


>gi|15923912|ref|NP_371446.1| hypothetical protein SAV0922 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926511|ref|NP_374044.1| hypothetical protein SA0783 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21282534|ref|NP_645622.1| hypothetical protein MW0805 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49485699|ref|YP_042920.1| hypothetical protein SAS0793 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57651614|ref|YP_185795.1| hypothetical protein SACOL0925 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87159978|ref|YP_493527.1| hypothetical protein SAUSA300_0827 [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88194616|ref|YP_499412.1| hypothetical protein SAOUHSC_00859 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148267355|ref|YP_001246298.1| hypothetical protein SaurJH9_0921 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150393408|ref|YP_001316083.1| hypothetical protein SaurJH1_0940 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|151221006|ref|YP_001331828.1| hypothetical protein NWMN_0794 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156979248|ref|YP_001441507.1| hypothetical protein SAHV_0917 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161509124|ref|YP_001574783.1| hypothetical protein USA300HOU_0883 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221141914|ref|ZP_03566407.1| hypothetical protein SauraJ_09825 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253316401|ref|ZP_04839614.1| hypothetical protein SauraC_09706 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|255005712|ref|ZP_05144313.2| hypothetical protein SauraM_04565 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257795388|ref|ZP_05644367.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|258418099|ref|ZP_05682364.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|258422102|ref|ZP_05685016.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|258431488|ref|ZP_05688573.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|258443518|ref|ZP_05691859.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|258445709|ref|ZP_05693886.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|258450099|ref|ZP_05698195.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|258452125|ref|ZP_05700141.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|258453855|ref|ZP_05701827.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|262049617|ref|ZP_06022485.1| hypothetical protein SAD30_1200 [Staphylococcus aureus D30]
 gi|269202537|ref|YP_003281806.1| hypothetical protein SAAV_0883 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282894729|ref|ZP_06302956.1| hypothetical protein SGAG_02076 [Staphylococcus aureus A8117]
 gi|282922202|ref|ZP_06329897.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|282929120|ref|ZP_06336701.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|284023850|ref|ZP_06378248.1| hypothetical protein Saura13_04644 [Staphylococcus aureus subsp.
           aureus 132]
 gi|294850197|ref|ZP_06790933.1| hypothetical protein SKAG_02288 [Staphylococcus aureus A9754]
 gi|295407687|ref|ZP_06817475.1| hypothetical protein SMAG_02857 [Staphylococcus aureus A8819]
 gi|296277145|ref|ZP_06859652.1| hypothetical protein SauraMR_12391 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297208442|ref|ZP_06924872.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|297246707|ref|ZP_06930528.1| hypothetical protein SLAG_02763 [Staphylococcus aureus A8796]
 gi|300912518|ref|ZP_07129961.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304381524|ref|ZP_07364174.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|13700725|dbj|BAB42022.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246691|dbj|BAB57084.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|21203971|dbj|BAB94670.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49244142|emb|CAG42568.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57285800|gb|AAW37894.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           COL]
 gi|87125952|gb|ABD20466.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202174|gb|ABD29984.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147740424|gb|ABQ48722.1| protein of unknown function DUF81 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149945860|gb|ABR51796.1| protein of unknown function DUF81 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|150373806|dbj|BAF67066.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156721383|dbj|BAF77800.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160367933|gb|ABX28904.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257789360|gb|EEV27700.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|257838892|gb|EEV63371.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|257841915|gb|EEV66350.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|257849387|gb|EEV73359.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|257851302|gb|EEV75243.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|257855285|gb|EEV78223.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|257856639|gb|EEV79544.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|257860340|gb|EEV83172.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|257863720|gb|EEV86476.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|259162259|gb|EEW46833.1| hypothetical protein SAD30_1200 [Staphylococcus aureus D30]
 gi|262074827|gb|ACY10800.1| hypothetical protein SAAV_0883 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269940425|emb|CBI48802.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282589312|gb|EFB94406.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|282593492|gb|EFB98486.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|282763006|gb|EFC03139.1| hypothetical protein SGAG_02076 [Staphylococcus aureus A8117]
 gi|283470122|emb|CAQ49333.1| conserved protein YunE [Staphylococcus aureus subsp. aureus ST398]
 gi|285816601|gb|ADC37088.1| hypothetical protein SA2981_0877 [Staphylococcus aureus 04-02981]
 gi|294822971|gb|EFG39404.1| hypothetical protein SKAG_02288 [Staphylococcus aureus A9754]
 gi|294967456|gb|EFG43497.1| hypothetical protein SMAG_02857 [Staphylococcus aureus A8819]
 gi|296887181|gb|EFH26084.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|297176423|gb|EFH35693.1| hypothetical protein SLAG_02763 [Staphylococcus aureus A8796]
 gi|300886764|gb|EFK81966.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302750751|gb|ADL64928.1| sulfite exporter TauE/SafE-like protein [Staphylococcus aureus
           subsp. aureus str. JKD6008]
 gi|304339887|gb|EFM05831.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|312829319|emb|CBX34161.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315128396|gb|EFT84406.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315197275|gb|EFU27613.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320141260|gb|EFW33107.1| hypothetical protein HMPREF9528_00880 [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320143032|gb|EFW34823.1| hypothetical protein HMPREF9529_01552 [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|329313590|gb|AEB88003.1| Sulfite exporter TauE/SafE-like protein [Staphylococcus aureus
           subsp. aureus T0131]
 gi|329724617|gb|EGG61124.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           21172]
 gi|329726221|gb|EGG62691.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           21189]
 gi|329733911|gb|EGG70233.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           21193]
          Length = 275

 Score = 44.3 bits (103), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +FL G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 ITTFLIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSI 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIAQGHV 223



 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 20/147 (13%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           G+  +I   VA+GTS  ++  T + S + + +   +++K    ++F L   +++ S +  
Sbjct: 42  GLLHNITTQVAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLLGSFISR 101

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRD-----RLYCERKFPDNYVK--------------- 159
           ++     N  F IF + + IL++ R+     +++ + K+   YV                
Sbjct: 102 YLTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKTYHYSVPPLFA 161

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLML 186
           +I   + G L+G  G+GGG     LML
Sbjct: 162 FITTFLIGILTGLFGIGGGALMTPLML 188


>gi|124485177|ref|YP_001029793.1| hypothetical protein Mlab_0350 [Methanocorpusculum labreanum Z]
 gi|124362718|gb|ABN06526.1| protein of unknown function DUF81 [Methanocorpusculum labreanum Z]
          Length = 268

 Score = 44.3 bits (103), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 9/172 (5%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +IC++I    L+G +SGL GVGGG +  PV+    +  G+ D + + VA GTSL    PT
Sbjct: 5   FICILIGTGLLAGFMSGLLGVGGGFLYAPVMYFVLRHSGVPDDMAILVAFGTSLAAAFPT 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM----ISHVDKSFLNKAFAIFCLLM 137
            +   + H + G +   + +D  F++ +   VT  +     +++    L   F++  +L 
Sbjct: 65  VLTGAVGHTKKGNV---VWRD-AFIMGLCGTVTGFIGGTVATYLPVQILTILFSVMLILG 120

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            I ++         + P      I G   GF+SG LGVGGG     LM+  G
Sbjct: 121 AIRLVTCLPSGTGERMPAPLAGGIGG-TAGFMSGLLGVGGGTILVPLMVLLG 171


>gi|49483083|ref|YP_040307.1| hypothetical protein SAR0885 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257424971|ref|ZP_05601398.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427638|ref|ZP_05604037.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430273|ref|ZP_05606656.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432970|ref|ZP_05609330.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435874|ref|ZP_05611922.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903460|ref|ZP_06311351.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           C160]
 gi|282905238|ref|ZP_06313095.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908218|ref|ZP_06316049.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910499|ref|ZP_06318303.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913695|ref|ZP_06321484.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           M899]
 gi|282918621|ref|ZP_06326358.1| hypothetical protein SASG_02176 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282923611|ref|ZP_06331291.1| hypothetical protein SARG_00931 [Staphylococcus aureus subsp.
           aureus C101]
 gi|283957661|ref|ZP_06375114.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500737|ref|ZP_06666588.1| hypothetical protein SCAG_01267 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293509688|ref|ZP_06668399.1| hypothetical protein SAZG_00836 [Staphylococcus aureus subsp.
           aureus M809]
 gi|293524275|ref|ZP_06670962.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           M1015]
 gi|295427406|ref|ZP_06820041.1| hypothetical protein SIAG_01944 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297590234|ref|ZP_06948873.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|49241212|emb|CAG39891.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257272541|gb|EEV04664.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275831|gb|EEV07304.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279050|gb|EEV09661.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282385|gb|EEV12520.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285065|gb|EEV15184.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|282314479|gb|EFB44869.1| hypothetical protein SARG_00931 [Staphylococcus aureus subsp.
           aureus C101]
 gi|282317755|gb|EFB48127.1| hypothetical protein SASG_02176 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282322727|gb|EFB53049.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           M899]
 gi|282325891|gb|EFB56199.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327883|gb|EFB58165.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331645|gb|EFB61157.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282596415|gb|EFC01376.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           C160]
 gi|283791112|gb|EFC29927.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290921238|gb|EFD98299.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291095742|gb|EFE26003.1| hypothetical protein SCAG_01267 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291467785|gb|EFF10300.1| hypothetical protein SAZG_00836 [Staphylococcus aureus subsp.
           aureus M809]
 gi|295128794|gb|EFG58425.1| hypothetical protein SIAG_01944 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297576533|gb|EFH95248.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|312438715|gb|ADQ77786.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|315194454|gb|EFU24846.1| hypothetical protein CGSSa00_12045 [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 275

 Score = 43.9 bits (102), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +FL G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 ITTFLIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSI 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIAQGHV 223



 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 20/147 (13%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           G+  +I   +A+GTS  ++  T + S + + +   +++K    ++F L   +++ S +  
Sbjct: 42  GLLHNITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLLGSFISR 101

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRL-----YCERKFPDNYVK--------------- 159
           ++     N  F IF + + IL++ R+++     + + K+   YV                
Sbjct: 102 YLTFESFNLYFGIFLIFVAILLMVRNKIKPFKTFDKPKYEKTYVDAKGKTYHYSVPPLFA 161

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLML 186
           +I   + G L+G  G+GGG     LML
Sbjct: 162 FITTFLIGILTGLFGIGGGALMTPLML 188


>gi|228996661|ref|ZP_04156299.1| hypothetical protein bmyco0003_12470 [Bacillus mycoides Rock3-17]
 gi|229004310|ref|ZP_04162110.1| hypothetical protein bmyco0002_12740 [Bacillus mycoides Rock1-4]
 gi|228756944|gb|EEM06189.1| hypothetical protein bmyco0002_12740 [Bacillus mycoides Rock1-4]
 gi|228763090|gb|EEM11999.1| hypothetical protein bmyco0003_12470 [Bacillus mycoides Rock3-17]
          Length = 281

 Score = 43.9 bits (102), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 39/221 (17%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           +YN   + +  +  +++YI L+ +   ++GT+  L G+GGG+++VP+      L+G+  S
Sbjct: 1   MYNECWISYTEELAILEYIMLLFIG-LIAGTVGSLVGLGGGIIIVPL------LIGL-HS 52

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +   +A+GTS+  +  T + S + + +H  ++ K       +L I +    ++ S  +K 
Sbjct: 53  LSPQLAVGTSIVTVVFTGLSSTLTYMKHKRVDYKSG----LILFIGSGPGGIIGSWANK- 107

Query: 125 FLNKA-----FAIFCLLMGILMLKRDRL---------YCERKFPDNYVKYIW-------- 162
           FLN+      F IF + + IL+L RD+L           +R F D+  K ++        
Sbjct: 108 FLNQDSFSLYFGIFLIFVSILLLLRDKLKPLSLSNATVIKRSFTDSEGKTVYYQFPPFLS 167

Query: 163 ---GMVTGFLSGALGVGGGI-FTNLLMLFYGASIYKATATS 199
                V GF+SG  G+GGG+     +ML +      A ATS
Sbjct: 168 IIIAFVVGFISGLFGIGGGVLLVPAMMLLFAFPAQIAVATS 208



 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 13/81 (16%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+ +F+ G +SGLFG+GGG+++VP +   F       +    +A+ TS+ ++  ++++S 
Sbjct: 168 IIIAFVVGFISGLFGIGGGVLLVPAMMLLF-------AFPAQIAVATSMFIVFLSAIVSS 220

Query: 87  MEHRRHGTINMKILKDWIFVL 107
           + H   G ++      WI+ L
Sbjct: 221 LTHISLGNVS------WIYAL 235


>gi|299068584|emb|CBJ39813.1| conserved membrane protein of unknown function, DUF81 [Ralstonia
           solanacearum CMR15]
          Length = 263

 Score = 43.9 bits (102), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 21/154 (13%)

Query: 58  LMGIDDSICMHVAMGTSLGVIAPTSVMSFME-HRRHGTINMKILKDWIFVLPITTVVTSL 116
           L G+D     H+A GT+L +IAP  ++ F+  H+RH  ++++ +        ++T V + 
Sbjct: 41  LYGMDQ----HLAQGTALVMIAPNVLIGFLRYHQRH-PVHLRSVATLCAFAMVSTYVAAR 95

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLK--RDRLY-----------CERKFPDNYVKYIWG 163
             + +D   L  AFA F + + +      RDR +             R  P   +  + G
Sbjct: 96  FAAGLDADHLRTAFAWFLIALAVYFASQLRDRPHPAPAAAHPESGAPRAMPPAAIALL-G 154

Query: 164 MVTGFLSGALGVGGG-IFTNLLMLFYGASIYKAT 196
           + +G +SG   VGGG +    L+  +G S  +A 
Sbjct: 155 IASGGMSGIFTVGGGLVVVPALVTLFGMSQTRAQ 188


>gi|298208928|ref|YP_003717107.1| hypothetical protein CA2559_11828 [Croceibacter atlanticus
           HTCC2559]
 gi|83848855|gb|EAP86724.1| membrane protein, putative [Croceibacter atlanticus HTCC2559]
          Length = 266

 Score = 43.9 bits (102), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 19/127 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LII    + G ++G+ G GGG +++P L    +L        M  A+ TSL +IA  S++
Sbjct: 150 LIIAEGIIVGAITGIVGAGGGFLIIPALVLLAKL-------PMKKAVATSLFIIAIKSLI 202

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTV-VTSLMI-----SHVDKSFLNKAFAIFCLLMG 138
            F+   ++  I      DW F+L  T + +  + I       +D   L KAF  F L+MG
Sbjct: 203 GFLGDVQNLDI------DWPFLLIFTGLSIIGIFIGIWLNKFIDGKKLKKAFGWFVLIMG 256

Query: 139 ILMLKRD 145
           I ++ ++
Sbjct: 257 IYIIYKE 263


>gi|108757215|ref|YP_628460.1| membrane protein [Myxococcus xanthus DK 1622]
 gi|108461095|gb|ABF86280.1| membrane protein [Myxococcus xanthus DK 1622]
          Length = 293

 Score = 43.9 bits (102), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 15/124 (12%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G LSGL G GGG ++VP LS A         + M VA  TSL VIA       + H  H 
Sbjct: 143 GALSGLVGAGGGFLIVPALSLA--------GLPMPVATATSLVVIALQCAAGLVGHLGHL 194

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK-------RDR 146
            +   +  + +      ++V   +   V  + L K FA+F L     +L        R+R
Sbjct: 195 DLPWVLTGEVLLAAMTGSLVGGRLAGRVSPAMLRKGFAVFVLTTAAFLLGAQSPAPLRER 254

Query: 147 LYCE 150
           ++ E
Sbjct: 255 VWTE 258


>gi|229134474|ref|ZP_04263287.1| hypothetical protein bcere0014_33850 [Bacillus cereus BDRD-ST196]
 gi|228649095|gb|EEL05117.1| hypothetical protein bcere0014_33850 [Bacillus cereus BDRD-ST196]
          Length = 256

 Score = 43.9 bits (102), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G +   I         I + + S   S +  +
Sbjct: 40  IPIHVALATSLTAMAFTTLSGVVSHYREGNVVFVIGGIVGGFGAIGSFIGSKFGSLIPAN 99

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKF----------PDNYVKYIW-GMVTGFLSGAL 173
            L+   A    L  I M  R  ++ +R             DN +K I+ G+VTG L+GA 
Sbjct: 100 LLHWFTAGMLFLSAIFMFIRLIIFQKRSQSSLKGHKELSKDNVIKCIFLGLVTGILAGAF 159

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I +    S G + L+  P   + I  G+G +     S G++
Sbjct: 160 GIGSAPFIQLGLMVLLGLTIRQ----SVGTTMLVILP---IAIGGGFGYS-----SEGYL 207

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           +      +L + +LI    T L   IG K+      + + FSMIM
Sbjct: 208 D-----YVLLVQVLI---GTMLGAYIGAKFTNYAPRMLLRFSMIM 244


>gi|212223719|ref|YP_002306955.1| hypothetical membrane protein, conserved [Thermococcus onnurineus
           NA1]
 gi|212008676|gb|ACJ16058.1| hypothetical membrane protein, conserved [Thermococcus onnurineus
           NA1]
          Length = 254

 Score = 43.9 bits (102), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 10/153 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + Y+    V  F+ G L+ LFG+GGG ++VP L+    L+G++    +H A+GTS   + 
Sbjct: 2   LKYLGYFTVGVFI-GILAALFGLGGGFLIVPTLN----LLGVE----IHHAVGTSSAAVV 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ S + + R   I+ KI         I   + + M S +    L   F    +++ I
Sbjct: 53  FTSLSSALAYSRQKRIHYKIGLLLASTAVIGAYIGAWMTSFISAGMLKVIFGATLIIVAI 112

Query: 140 LMLKRDRLY-CERKFPDNYVKYIWGMVTGFLSG 171
            + ++      E +  D  V Y    + GF +G
Sbjct: 113 RIYRKKTAEPTEVRLEDVKVDYRLVPIGGFFAG 145


>gi|187926093|ref|YP_001892438.1| protein of unknown function DUF81 [Ralstonia pickettii 12J]
 gi|241665581|ref|YP_002983940.1| hypothetical protein Rpic12D_4018 [Ralstonia pickettii 12D]
 gi|187727847|gb|ACD29011.1| protein of unknown function DUF81 [Ralstonia pickettii 12J]
 gi|240867608|gb|ACS65268.1| protein of unknown function DUF81 [Ralstonia pickettii 12D]
          Length = 260

 Score = 43.9 bits (102), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 19/190 (10%)

Query: 58  LMGIDDSICMHVAMGTSLGVIAPTSVMSFME-HRRHGTINMKILKDWIFVLPITTVVTSL 116
           L G+D     H+A GT+L +IAP  ++ F   H+RH      +    +F +   T V + 
Sbjct: 41  LYGMDQ----HLAQGTALVMIAPNVLIGFWRYHQRHPVHVRSVALICVFSMG-ATYVAAR 95

Query: 117 MISHVDKSFLNKAFAIFCLLMGI-----LMLKRDRLYCERKFPDNYVKY---IWGMVTGF 168
             + +D + L+ AFA+F +++ +     L  K +        P         + G+ +G 
Sbjct: 96  FAAGLDANLLHTAFAVFLIVLAVYFASQLKEKPNAAGAAHAVPHTMPAAALPLMGIASGA 155

Query: 169 LSGALGVGGG-IFTNLLMLFYGASIYKATATSAGV---SALIAFPALLVRIYSGWGLNGL 224
           +SG   VGGG +  + L+ F+G    +A   +  +    +LIA  A     +  WG  G+
Sbjct: 156 MSGIFTVGGGLVVVSALVTFFGMPQTRAQGMALALVVPGSLIALAAYAHAGHVDWG-TGI 214

Query: 225 PPWSLGFVNI 234
           P  + G V++
Sbjct: 215 PLAAGGVVSV 224


>gi|34541225|ref|NP_905704.1| hypothetical protein PG1572 [Porphyromonas gingivalis W83]
 gi|34397541|gb|AAQ66603.1| membrane protein, putative [Porphyromonas gingivalis W83]
          Length = 268

 Score = 43.9 bits (102), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 19/128 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            LI++   + GTL+GL G GGG +++P    A   +G    + M  A+GTSL +I+  S+
Sbjct: 150 ALILLEGIVVGTLTGLVGAGGGFLIIP----ALVFLG---GLPMKQAIGTSLVIISAKSL 202

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITT-VVTSLMI-----SHVDKSFLNKAFAIFCLLM 137
           + F+       +      DW  +L +T   +  + I      ++D   L  AF  F  +M
Sbjct: 203 LGFLGENNPAGL------DWGLLLSVTAFAIIGIFIGMKLSQYIDGDKLKPAFGWFVFVM 256

Query: 138 GILMLKRD 145
           G+ ++ ++
Sbjct: 257 GLYIILKE 264


>gi|254371990|ref|ZP_04987483.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569721|gb|EDN35375.1| conserved hypothetical protein [Francisella novicida GA99-3549]
          Length = 262

 Score = 43.9 bits (102), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 46/212 (21%), Positives = 99/212 (46%), Gaps = 3/212 (1%)

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
           I+D + M VA+ +++       +++ ++  ++  I    L+  +  + +  ++   +++ 
Sbjct: 46  INDHL-MQVAIASAVSSGISVGLLATLKQHKYKQICYDTLRWAVISILLGGILGVFLVTI 104

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
           +  S L   F+I  ++MG  M ++ +   +       +K I   + G  +   G+   +F
Sbjct: 105 IKSSDLKIVFSILLIIMGTWMWRKTKTTLKVWQAPLVLKSIGAFLAGMFTMLSGIS--VF 162

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
              L+   G  I KA  TS  ++  I+    +  I  GW  + LPP+S+G++N+   L  
Sbjct: 163 FVPLLTKCGLDIRKAIGTSTIITFFISLVMSIFFISFGWHASNLPPYSIGYLNLIIFLAG 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           L  S++   +  K +     KYL I + ++MF
Sbjct: 223 LIPSLIGVSIGVKATASFPHKYLQIIYILMMF 254


>gi|229111095|ref|ZP_04240653.1| hypothetical protein bcere0018_33420 [Bacillus cereus Rock1-15]
 gi|228672343|gb|EEL27629.1| hypothetical protein bcere0018_33420 [Bacillus cereus Rock1-15]
          Length = 245

 Score = 43.9 bits (102), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 12/147 (8%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV----TSLMISH 120
           I +HVA+ TSL  +A T++   + H R G + + I         I + +     SL+ +H
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 88

Query: 121 VDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKFPDNY-VKYI-WGMVTGFLSGAL 173
           +   F        AIF  +  I+   +++  LY  ++F  NY +K I  G+VTG ++G+ 
Sbjct: 89  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKEFSMNYLLKCICLGLVTGMMAGSF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATS 199
           G+G   F  L LM+  G +I ++  T+
Sbjct: 149 GIGSAPFIQLGLMVLLGLTIQQSVGTT 175


>gi|218898767|ref|YP_002447178.1| permease [Bacillus cereus G9842]
 gi|218545096|gb|ACK97490.1| permease [Bacillus cereus G9842]
          Length = 251

 Score = 43.9 bits (102), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 45/242 (18%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           ++ +L+  FQ       I +HVA+ TSL  +A T++   + H R G + + I        
Sbjct: 25  IIAILTLVFQ-------IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFG 77

Query: 108 PITTVVTS----LMISHVDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKFPDNY- 157
            I + + S    L+ +H+   F        AIF  +  I+  K+++  LY  ++F   Y 
Sbjct: 78  AIGSYIGSKFGLLIPAHLLHWFTAGMLFLSAIFMFIKLIMFQKKEQSSLYKHKEFSVKYL 137

Query: 158 VKYI-WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
           +K +  G+VTG ++G+ G+G   F  L LM+  G +I +    S G + L+  P     I
Sbjct: 138 LKCVCLGLVTGMMAGSFGIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----I 188

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT------IGFSM 269
             G G        LG+ + G +  IL + +LI    T L   IG K+        + FSM
Sbjct: 189 AIGGG--------LGYSSEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRTLLRFSM 237

Query: 270 IM 271
           IM
Sbjct: 238 IM 239


>gi|296110128|ref|YP_003617077.1| protein of unknown function DUF81 [Methanocaldococcus infernus ME]
 gi|295434942|gb|ADG14113.1| protein of unknown function DUF81 [Methanocaldococcus infernus ME]
          Length = 249

 Score = 43.9 bits (102), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 14/158 (8%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+  FL GT+ GL G+GGG++M P+L      +G++  I    A+GT L     T  +S 
Sbjct: 7   IILGFLVGTIVGLTGIGGGVLMTPLL----IFLGVEPLI----AVGTDLLYATATKGLSS 58

Query: 87  MEHRRHGTINMKI-LKDWIFVLPITTVVTSLMISHVDK----SFLNKAFAIFCLLMGILM 141
             H + G ++ KI LK +    P   ++  L++  +++    +FL    A+  +L  ++ 
Sbjct: 59  YLHNKKGNVDKKIALKLFFGTFP-AVLLGGLILRMINRDIINNFLTAMLAVILILTSLIN 117

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
           LK++    ++K   +Y+   +G V G +     VG G+
Sbjct: 118 LKKEFFIFKKKVNSSYILVFFGFVVGLVVQFTSVGSGV 155


>gi|326800974|ref|YP_004318793.1| hypothetical protein Sph21_3586 [Sphingobacterium sp. 21]
 gi|326551738|gb|ADZ80123.1| protein of unknown function DUF81 [Sphingobacterium sp. 21]
          Length = 265

 Score = 43.9 bits (102), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 67/132 (50%), Gaps = 8/132 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           +   ++Y  +++   F+ G ++GL G GGG +++P L    +L        M  A+GTSL
Sbjct: 140 QKQSLNYFQILLQGIFI-GVITGLIGAGGGFLIIPALVNLLKL-------PMKTAVGTSL 191

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            +I+  S+M F+    H ++    L     +  I  ++ S + + +  + L  AF  F L
Sbjct: 192 VIISINSLMGFLFSLSHTSVQWGFLLSIAAIAIIGILIGSYLSTKIRANRLKPAFGWFVL 251

Query: 136 LMGILMLKRDRL 147
           +MGI ++ ++ L
Sbjct: 252 VMGIYIIIKETL 263


>gi|254228861|ref|ZP_04922283.1| domain of unknown function, putative [Vibrio sp. Ex25]
 gi|262396789|ref|YP_003288642.1| hypothetical protein VEA_001494 [Vibrio sp. Ex25]
 gi|151938538|gb|EDN57374.1| domain of unknown function, putative [Vibrio sp. Ex25]
 gi|262340383|gb|ACY54177.1| hypothetical protein VEA_001494 [Vibrio sp. Ex25]
          Length = 268

 Score = 43.9 bits (102), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 4/216 (1%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+ +  F L GI D+  +H+A+GTS+  +  T++ S   H +   ++  ++   +  + +
Sbjct: 34  PIFAFLFSLQGIADTEVVHLALGTSMASMIITTLGSMRAHYKKENVDSTMVVKMLSGVLV 93

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIW-GMVTG 167
            T   + + S++   +L   F++F L +   M L  +  Y     P   +  I  G V G
Sbjct: 94  GTFCATFVASYLQGIYLAGFFSVFMLYVAYKMFLNTENEYNPN--PHGAIGNITVGSVIG 151

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S  + + G       ++     + +A  TSA +   IA    L  + +GW        
Sbjct: 152 SVSALVSISGAGLIIPYLVQQNFEVKRAIGTSAAIGFPIALSGSLGYMLNGWENTDWNNL 211

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            LG++ + A++     S L T L  + +     K L
Sbjct: 212 VLGYIYLPAMISFSISSYLTTSLGVRCAEYFPNKVL 247


>gi|291296623|ref|YP_003508021.1| hypothetical protein Mrub_2248 [Meiothermus ruber DSM 1279]
 gi|290471582|gb|ADD29001.1| protein of unknown function DUF81 [Meiothermus ruber DSM 1279]
          Length = 255

 Score = 43.5 bits (101), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 7/76 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  +I    ++G  SGL GVGGG + VP++     L+G++     H A GTSL  + P++
Sbjct: 132 IIPLIFTGAVAGFASGLLGVGGGTITVPIM---VLLVGLEQ----HTAQGTSLLAMIPSA 184

Query: 83  VMSFMEHRRHGTINMK 98
           ++    H RHG +  +
Sbjct: 185 LVGSYTHYRHGNLAQE 200



 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 30/184 (16%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +V VP++S   +L         H A+ TSL ++  T ++  + +  HGT+      DW+ 
Sbjct: 25  IVAVPLMSAFLKL-------SQHKAVATSLVMVVFTGLVGALTYATHGTV------DWLA 71

Query: 106 VLPI------TTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYV 158
            L I      T    +   + + +  L + F  + +++ + L+LK    + E      ++
Sbjct: 72  ALLIFPSAMLTANWGARFANRLPEWKLKRVFGWYLVVVALSLILKPYIPHVEEPL-QGWL 130

Query: 159 KYI----WGMVTGFLSGALGVGGGIFT-NLLMLFYGASIYKATATSAGVSALIAFPALLV 213
           + I     G V GF SG LGVGGG  T  +++L  G   +    T+ G S L   P+ LV
Sbjct: 131 RIIPLIFTGAVAGFASGLLGVGGGTITVPIMVLLVGLEQH----TAQGTSLLAMIPSALV 186

Query: 214 RIYS 217
             Y+
Sbjct: 187 GSYT 190


>gi|228902172|ref|ZP_04066335.1| hypothetical protein bthur0014_33510 [Bacillus thuringiensis IBL
           4222]
 gi|228857452|gb|EEN01949.1| hypothetical protein bthur0014_33510 [Bacillus thuringiensis IBL
           4222]
          Length = 245

 Score = 43.5 bits (101), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 38/226 (16%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV----TSLMIS 119
            I +HVA+ TSL  +A T++   + H R G + + I         I + +     SL+ +
Sbjct: 28  QIPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPA 87

Query: 120 HVDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKFPDNY-VKYI-WGMVTGFLSGA 172
           H+   F        AIF  +  I+  K+++  LY  ++F   Y +K +  G+VTG ++G+
Sbjct: 88  HLLHWFTAGMLFLSAIFMFIKLIMFQKKEQSSLYKHKEFSVKYLLKCVCLGLVTGMMAGS 147

Query: 173 LGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF 231
            G+G   F  L LM+  G +I +    S G + L+  P     I  G G        LG+
Sbjct: 148 FGIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----IAIGGG--------LGY 190

Query: 232 VNIGAVLIILPISILITPLATKLSYMIGKKYLT------IGFSMIM 271
            + G +  IL + +LI    T L   IG K+        + FSMIM
Sbjct: 191 SSEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRTLLRFSMIM 233


>gi|332292374|ref|YP_004430983.1| protein of unknown function DUF81 [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332170460|gb|AEE19715.1| protein of unknown function DUF81 [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 270

 Score = 43.5 bits (101), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 18/123 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI++   + G ++G+ G GGG +++P L        I  ++ M VA+GTSL +IA  S+M
Sbjct: 151 LILIEGLIVGGITGMIGAGGGFLIIPALV-------ILANVEMKVAVGTSLIIIAFKSLM 203

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTV------VTSLMISHVDKSFLNKAFAIFCLLMG 138
            F        + M I  DW+F+   T +      + S + + +D   L + F  F  +M 
Sbjct: 204 GFF---LGDALTMDI--DWLFLSIFTGISFVGIFIGSYLSNFIDGDKLKRGFGYFIFVMA 258

Query: 139 ILM 141
           I +
Sbjct: 259 IFI 261


>gi|229144150|ref|ZP_04272565.1| hypothetical protein bcere0012_13140 [Bacillus cereus BDRD-ST24]
 gi|228639369|gb|EEK95784.1| hypothetical protein bcere0012_13140 [Bacillus cereus BDRD-ST24]
          Length = 281

 Score = 43.5 bits (101), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 104/216 (48%), Gaps = 29/216 (13%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           +YN   + +L +  +++YI L+ +   ++GT+  L G+GGG+++VP+      L+G+  S
Sbjct: 1   MYNNWWISYLEELAILEYIMLLFIG-LIAGTVGSLVGLGGGIIIVPL------LIGL-HS 52

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +   +A+GTS+  +  T + S + + +H  ++ K             ++ S     +++ 
Sbjct: 53  LSPQLAVGTSMVTVVFTGLSSTLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKLLNQD 112

Query: 125 FLNKAFAIFCLLMGILMLKRDRL---------YCERKFPDN-----------YVKYIWGM 164
             +  F IF + + IL++ RD+L           +R F DN           ++      
Sbjct: 113 TFSLYFGIFLIFVSILLMLRDKLKPLSLSNTSVIKRSFTDNDGNTVHYQFPPFLAIFIAF 172

Query: 165 VTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
           + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 173 IVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 208



 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 166 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 218

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 219 SSATHISLGNVS------WIYAL 235


>gi|75762059|ref|ZP_00741968.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74490449|gb|EAO53756.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 258

 Score = 43.5 bits (101), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 45/242 (18%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           ++ +L+  FQ       I +HVA+ TSL  +A T++   + H R G + + I        
Sbjct: 32  IIAILTLVFQ-------IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFG 84

Query: 108 PITTVV----TSLMISHVDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKFPDNY- 157
            I + +     SL+ +H+   F        AIF  +  I+  K+++  LY  ++F   Y 
Sbjct: 85  AIGSYIGSKFGSLIPAHLLHWFTAGMLFLSAIFMFIKLIMFQKKEQSSLYKHKEFSVKYL 144

Query: 158 VKYI-WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
           +K +  G+VTG ++G+ G+G   F  L LM+  G +I +    S G + L+  P     I
Sbjct: 145 LKCVCLGLVTGMMAGSFGIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----I 195

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT------IGFSM 269
             G G        LG+ + G +  IL + +LI    T L   IG K+        + FSM
Sbjct: 196 AIGGG--------LGYSSEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRTLLRFSM 244

Query: 270 IM 271
           IM
Sbjct: 245 IM 246


>gi|327399592|ref|YP_004340461.1| hypothetical protein Hipma_1446 [Hippea maritima DSM 10411]
 gi|327182221|gb|AEA34402.1| protein of unknown function DUF81 [Hippea maritima DSM 10411]
          Length = 267

 Score = 43.5 bits (101), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 29/202 (14%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++++ + I+ SFL+ ++  L G+GGG+VMVP+     +L        +  A+  SL  I 
Sbjct: 2   IEFLSVSII-SFLASSVGALLGIGGGVVMVPLFVMFCKL-------TIQQAVAISLFTII 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS +   +  + G +N+K+           ++V  L+   ++   L+  F +F + +  
Sbjct: 54  GTSALVSSKFIKSGALNLKLGISLELFTTGGSIVGGLVALRLNHRLLSALFGLFLIGVAF 113

Query: 140 LMLKRDRLYCER--------KFPDNYVKYIW------------GMVTGFLSGALGVGGGI 179
           LM  ++R   E+         F D   K ++                G  SG  G+GGG+
Sbjct: 114 LMSIKNRKNMEKLAENGSFSYFDDKLNKNVFYTPKNLTAAYPISFAAGLTSGMFGIGGGV 173

Query: 180 FT-NLLMLFYGASIYKATATSA 200
               LL       I  ATATS+
Sbjct: 174 LKVPLLFKICKLPIKVATATSS 195


>gi|253731529|ref|ZP_04865694.1| protein of hypothetical function DUF81 [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|253724772|gb|EES93501.1| protein of hypothetical function DUF81 [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
          Length = 275

 Score = 43.5 bits (101), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +FL G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +S+MS +
Sbjct: 163 ITTFLIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSIMSSI 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIAQGHV 223



 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 20/147 (13%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           G+  +I   VA+GTS  ++  T + S + + +   +++K    ++F L   +++ S +  
Sbjct: 42  GLLHNITTQVAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLLGSFISR 101

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRD-----RLYCERKFPDNYVK--------------- 159
           ++     N  F IF + + IL++ R+     +++ + K+   YV                
Sbjct: 102 YLTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKTYHYSVPPLFA 161

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLML 186
           +I   + G L+G  G+GGG     LML
Sbjct: 162 FITTFLIGILTGLFGIGGGALMTPLML 188


>gi|229179958|ref|ZP_04307303.1| hypothetical protein bcere0005_33040 [Bacillus cereus 172560W]
 gi|228603492|gb|EEK60968.1| hypothetical protein bcere0005_33040 [Bacillus cereus 172560W]
          Length = 245

 Score = 43.5 bits (101), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 12/147 (8%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV----TSLMISH 120
           I +HVA+ TSL  +A T++   + H R G + + I         I + +     SL+ +H
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 88

Query: 121 VDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKFPDNY-VKYI-WGMVTGFLSGAL 173
           +   F        AIF  +  I+   +++  LY  ++F  NY +K +  G+VTG ++G+ 
Sbjct: 89  LLHWFTAGMLFLSAIFMFIKLIMFQNKEKSSLYKHKEFSVNYLLKCVCLGLVTGMMAGSF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATS 199
           G+G   F  L LM+  G +I ++  T+
Sbjct: 149 GIGSAPFIQLGLMVLLGLTIQQSVGTT 175


>gi|120435621|ref|YP_861307.1| membrane protein [Gramella forsetii KT0803]
 gi|117577771|emb|CAL66240.1| membrane protein [Gramella forsetii KT0803]
          Length = 271

 Score = 43.5 bits (101), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 18/119 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI+    + G ++G+ G GGG +++P L        I  +I M  A+GTSL +IA  S++
Sbjct: 152 LILAEGLIVGGITGMIGAGGGFLIIPALV-------ILANIEMKTAVGTSLIIIAFKSLL 204

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTV------VTSLMISHVDKSFLNKAFAIFCLLM 137
            F        I M+I  DW F+  IT +      + S + ++++   L K F  F  LM
Sbjct: 205 GFF---LGDAITMEI--DWTFLGIITGLSFLGIFIGSYLSNYINGERLKKGFGYFIFLM 258


>gi|206890358|ref|YP_002249182.1| putative permease [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206742296|gb|ACI21353.1| putative permease [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 255

 Score = 43.5 bits (101), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 8/121 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L+++  F +G L+G+ G+GGG VMVP L        +  +   H+A GTSL  + P  
Sbjct: 137 ITLLVIGIF-AGFLAGMMGIGGGTVMVPALV-------LILNYGQHIAQGTSLLCMVPAG 188

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +    H + G +  ++L   I  + + T + S +   +  ++L   FA   +  GI  L
Sbjct: 189 AVGAYTHLKLGNVIKELLPGLIVGIILGTYIGSNIAHALADAYLRVIFAFIIIWTGIRFL 248

Query: 143 K 143
           K
Sbjct: 249 K 249


>gi|313206800|ref|YP_004045977.1| hypothetical protein Riean_1314 [Riemerella anatipestifer DSM
           15868]
 gi|312446116|gb|ADQ82471.1| protein of unknown function DUF81 [Riemerella anatipestifer DSM
           15868]
 gi|315023873|gb|EFT36875.1| hypothetical protein RAYM_00625 [Riemerella anatipestifer RA-YM]
 gi|325335760|gb|ADZ12034.1| Protein of unknown function DUF81 [Riemerella anatipestifer RA-GD]
          Length = 264

 Score = 43.5 bits (101), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 19/127 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+I    L G ++GL G GGG +++P L     ++G+     M  A+GTSL +I  +S +
Sbjct: 147 LLISQGLLVGIITGLVGAGGGFLIIPAL---VMILGLK----MKEAIGTSLFIITLSSTI 199

Query: 85  SFMEHRRHGTINMKILKDWIFVLPIT-----TVVTSLMIS-HVDKSFLNKAFAIFCLLMG 138
            F+          K+  DW F+L  T      V+  L +S  VD   L  AF  F L MG
Sbjct: 200 GFVSSLD------KVAIDWYFLLSFTGLSILGVLLGLALSKRVDGKKLKPAFGWFVLGMG 253

Query: 139 ILMLKRD 145
           + +L ++
Sbjct: 254 VYILIKE 260


>gi|118477008|ref|YP_894159.1| hypothetical protein BALH_1307 [Bacillus thuringiensis str. Al
           Hakam]
 gi|118416233|gb|ABK84652.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 281

 Score = 43.5 bits (101), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 111/221 (50%), Gaps = 39/221 (17%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           +YN   + ++ +  +++YI L+ +   ++GT+  L G+GGG+++VP+      L+G+  S
Sbjct: 1   MYNNWWISYIEELSILEYIMLLFIG-LIAGTVGSLVGLGGGIIIVPL------LIGL-HS 52

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +   +A+GTS+  +  T + S + + +H  ++ K       +L I +    ++ S  +K 
Sbjct: 53  LSPQLAVGTSMVTVVFTGLSSTLTYMKHKRVDYKSG----LILFIGSGPGGIIGSWANK- 107

Query: 125 FLNKA-----FAIFCLLMGILMLKRDRL---------YCERKFPDNY---VKYIW----- 162
           FLN+      F IF + + IL++ RD+L           +R F DN    V Y +     
Sbjct: 108 FLNQDTFSLYFGIFLIFVSILLMLRDKLKPLSLSNMTVIKRSFTDNEGNTVHYQFPPLLA 167

Query: 163 ---GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
                + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 168 IFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 208



 Score = 38.1 bits (87), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 166 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 218

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 219 SSATHISLGNVS------WIYAL 235


>gi|94312761|ref|YP_585970.1| hypothetical protein Rmet_3831 [Cupriavidus metallidurans CH34]
 gi|93356613|gb|ABF10701.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
          Length = 277

 Score = 43.5 bits (101), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 11/135 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           +P L     L G+D      +A GTSL +IAP  ++ F ++R+   I +K          
Sbjct: 58  IPALG---LLYGMDQ----QLAQGTSLVMIAPNVLIGFWQYRKRADIELKTAIVLGLSAV 110

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW----GM 164
           + T  ++   + +D + L + FA+F + + +  L R         P   +   W    G+
Sbjct: 111 LATYASAKFATSIDAALLRRIFAVFMIGLALYFLWRLLPGRATTQPQARLSPSWIPAVGV 170

Query: 165 VTGFLSGALGVGGGI 179
           V G  SG   VGGG+
Sbjct: 171 VGGAFSGFFSVGGGV 185


>gi|295706028|ref|YP_003599103.1| hypothetical protein BMD_3921 [Bacillus megaterium DSM 319]
 gi|294803687|gb|ADF40753.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 254

 Score = 43.5 bits (101), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 23/169 (13%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           GTL GL GVGG  ++ P+L     ++GI+ SI    A+GT L   + T +    +H +  
Sbjct: 13  GTLVGLTGVGGAALLTPLLI----VLGINPSI----AVGTDLVYNSITKLFGVAQHYKQR 64

Query: 94  TINMKILKDWIF------VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR--- 144
           TIN K+ K   F      VL I T+          ++ +  A      L+ I ++ R   
Sbjct: 65  TINFKLAKYLAFGSIPSAVLAIVTLHAFPSFHEHQETIIKHALGYVMTLVAISIIFRVFF 124

Query: 145 DRLYCERKFPD---NYVKYIW---GMVTGFLSGALGVGGGIFTNLLMLF 187
           D+L    +F +   N  K +    G+V GF+ G   +G G    + ML+
Sbjct: 125 DKLIRPNRFQEMDLNQKKGLTIGIGVVFGFIVGLTSIGSGSLFAIAMLY 173


>gi|57640914|ref|YP_183392.1| hypothetical protein TK0979 [Thermococcus kodakarensis KOD1]
 gi|57159238|dbj|BAD85168.1| hypothetical membrane protein, conserved, DUF81 family
           [Thermococcus kodakarensis KOD1]
          Length = 254

 Score = 43.5 bits (101), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 25/243 (10%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G L+ +FG+GGG ++VP L+     +G++    +H A+GTS   +  TS+ S + + R  
Sbjct: 15  GILAAMFGLGGGFLIVPTLN----FLGVE----IHHAVGTSSAAVVFTSLSSAIAYHRQR 66

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERK 152
            I+ K          I   + +   S++  + L   F +   L+ I L  K+ R   E  
Sbjct: 67  RIHYKAGLLLASTAVIGAYIGAWATSYISAAQLKVIFGVVLFLVAIRLYRKKSREPHEVD 126

Query: 153 FPDNYVKYIWGMVTGFLSG---ALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAF 208
             +  + Y    + GF++G    L   GG   N+  L Y G  I+ A ATS   S  I F
Sbjct: 127 LKEVKLNYKVVPIGGFIAGVASGLLGIGGGAINVPFLTYMGLPIHYAVATS---SFAIVF 183

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            A      SG     +  ++LG V +  +++++P  I+   L  K++       LT  F+
Sbjct: 184 TAT-----SG----AIKHYTLGNVEVEWLVLLVPGLIIGAQLGAKIAKRTKASQLTKAFA 234

Query: 269 MIM 271
           ++M
Sbjct: 235 VVM 237


>gi|119485715|ref|ZP_01619990.1| hypothetical protein L8106_25070 [Lyngbya sp. PCC 8106]
 gi|119457040|gb|EAW38167.1| hypothetical protein L8106_25070 [Lyngbya sp. PCC 8106]
          Length = 297

 Score = 43.5 bits (101), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 7/64 (10%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+G L+GLFG+GGG++MVP+     Q++ ++++I    A+ TSLGVI  T+  + + H  
Sbjct: 189 LAGLLAGLFGIGGGVIMVPL-----QILLLNETI--KTAIQTSLGVIVITAFSACLGHAL 241

Query: 92  HGTI 95
            G +
Sbjct: 242 QGNV 245


>gi|241895908|ref|ZP_04783204.1| permease [Weissella paramesenteroides ATCC 33313]
 gi|241870951|gb|EER74702.1| permease [Weissella paramesenteroides ATCC 33313]
          Length = 257

 Score = 43.1 bits (100), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 20/203 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++A  + G  + + G G G + V +L+  F +  +       VA  TSL  + P + +S
Sbjct: 6   LVIAGVIMGGFTVITGGGAGALYVSILTLGFNVSPV-------VATATSLATMFPVAAIS 58

Query: 86  FMEHRRHGTINMKILKDWIFV--LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              H + G IN KI   WI +    I  ++ S   + +  +  N+      +L+ +LM+ 
Sbjct: 59  SGLHAKSGNINFKI--GWIMIGWGTIGALIGSYFSNDIPTNHYNRLIGSIIILLTVLMII 116

Query: 144 RDR--------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           + R        +Y   K+      + +G+++G LSG +G  G       +   G + ++ 
Sbjct: 117 KKRQPVKLVKSVYHSNKYTFCQTSF-FGIISGLLSGLVGTSGTTTIIAGLTLLGCTTFQT 175

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             TS  V + I+    + R  SG
Sbjct: 176 VGTSVFVLSGISLVGFIARATSG 198


>gi|56707958|ref|YP_169854.1| hypothetical protein FTT_0851 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670429|ref|YP_666986.1| hypothetical protein FTF0851 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|56604450|emb|CAG45484.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110320762|emb|CAL08867.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. tularensis FSC198]
 gi|282159144|gb|ADA78535.1| hypothetical protein NE061598_04880 [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 252

 Score = 43.1 bits (100), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 15/128 (11%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD---SICMHVAMGTSLGVIAPTSVM 84
           VASF+S  L G    G GL+ VP    AF  + +     +  M +A+ T  G+      +
Sbjct: 12  VASFMSTLLGG----GAGLIAVP----AFYFIIVHTYGPNFAMQIALATCCGMSIFLGSI 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  +H + G I++  LK ++  L I  ++ S+++ +++   L   FAI     GI M+  
Sbjct: 64  ATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIVKYINTELLKMVFAILLFGSGIWMI-- 121

Query: 145 DRLYCERK 152
             LY + K
Sbjct: 122 --LYNDNK 127


>gi|296119361|ref|ZP_06837928.1| putative integral membrane protein [Corynebacterium ammoniagenes
           DSM 20306]
 gi|295967646|gb|EFG80904.1| putative integral membrane protein [Corynebacterium ammoniagenes
           DSM 20306]
          Length = 216

 Score = 43.1 bits (100), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 19/126 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I+   + G ++GL G GGG ++VP    A  L+G    + M VA+GTSL VI   S   
Sbjct: 66  VILDGLVVGVITGLVGAGGGFLVVP----ALALLG---GLSMPVAVGTSLVVITMKSFAG 118

Query: 86  FMEHRRHGTINMKILKDWIFVLPIT------TVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              +         +  DW  V  +T      +++ S +   + ++ L K F +F L+MG+
Sbjct: 119 LAGYL------TSVELDWALVGAVTVAAILGSLLGSRLAGRIPEALLRKGFGVFVLVMGV 172

Query: 140 LMLKRD 145
            +L ++
Sbjct: 173 FVLIQE 178


>gi|330684914|gb|EGG96596.1| putative membrane protein [Staphylococcus epidermidis VCU121]
          Length = 275

 Score = 43.1 bits (100), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA+ L G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 VATLLIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSI 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIIQGHV 223



 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 24/152 (15%)

Query: 59  MGIDDSI----CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           +G+D SI       +A+GTS  ++  T + S + + +   +++K    ++F L   +++ 
Sbjct: 37  LGVDHSILHGITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLIG 96

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRD-----RLYCERKFPDNY------------ 157
           S +  ++     N  F IF + + IL++ R      +++ + K+   Y            
Sbjct: 97  SFLSQYLTLKSFNLYFGIFMIFVAILLMVRHKIKPFKIFNKPKYEKTYIDAEGKTYHYSV 156

Query: 158 ---VKYIWGMVTGFLSGALGVGGGIFTNLLML 186
              V ++  ++ G L+G  G+GGG     LML
Sbjct: 157 PPLVAFVATLLIGILTGLFGIGGGALMTPLML 188


>gi|239636555|ref|ZP_04677557.1| conserved hypothetical protein [Staphylococcus warneri L37603]
 gi|239597910|gb|EEQ80405.1| conserved hypothetical protein [Staphylococcus warneri L37603]
          Length = 275

 Score = 43.1 bits (100), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA+ L G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 VATLLIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSI 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIIQGHV 223



 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 24/152 (15%)

Query: 59  MGIDDSI----CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           +G+D SI       +A+GTS  ++  T + S + + +   +++K    ++F L   +++ 
Sbjct: 37  LGVDHSILHGITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLIG 96

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL---------YCERKFPDN--------- 156
           S +  ++     N  F IF + + IL++ R ++           E+ + D          
Sbjct: 97  SFLSQYLTLKSFNLYFGIFMIFVAILLMVRHKIKPFKIFNKPQYEKTYIDAEGKTYHYSV 156

Query: 157 --YVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
             +V ++  ++ G L+G  G+GGG     LML
Sbjct: 157 PPFVAFVATLLIGILTGLFGIGGGALMTPLML 188


>gi|94311333|ref|YP_584543.1| hypothetical protein Rmet_2397 [Cupriavidus metallidurans CH34]
 gi|254241482|ref|ZP_04934804.1| hypothetical protein PA2G_02178 [Pseudomonas aeruginosa 2192]
 gi|24461528|gb|AAN62099.1|AF440523_6 conserved hypothetical membrane protein [Pseudomonas aeruginosa]
 gi|93355185|gb|ABF09274.1| putative membrane protein [Cupriavidus metallidurans CH34]
 gi|126194860|gb|EAZ58923.1| hypothetical protein PA2G_02178 [Pseudomonas aeruginosa 2192]
          Length = 268

 Score = 43.1 bits (100), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 11/116 (9%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           +SG  +G+ GVGGG ++VP L+   +L        MH  + TSL VIA  S ++      
Sbjct: 160 VSGLATGMLGVGGGFIIVPALAHFSELR-------MHSIVATSLMVIALLSAVTVFIAWS 212

Query: 92  HGTINMKILKDWIFVLP--ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           HG         W FVL   +   +  ++   +    L + F+I C+ +  LML R+
Sbjct: 213 HGMTLTA--PAWTFVLTALVGMSLGRVLARRIPSKMLQRVFSITCVAVAALMLMRN 266


>gi|251794851|ref|YP_003009582.1| hypothetical protein Pjdr2_0816 [Paenibacillus sp. JDR-2]
 gi|247542477|gb|ACS99495.1| protein of unknown function DUF81 [Paenibacillus sp. JDR-2]
          Length = 272

 Score = 43.1 bits (100), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 25/164 (15%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI--TTVVT 114
           QL G    I    A+GTSL ++  T++ S + + +   ++ K    W+F +      ++ 
Sbjct: 38  QLTG--GEISHATAVGTSLTMLIITALASTLSYAKKKLVDFK--SGWMFFITSGPAAMIG 93

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY-CERKFPDNYV---------KYIW-- 162
           S + S    +  + +F IF LLM  L++ RD L    R++P              Y +  
Sbjct: 94  SALTSRFQGAAFSLSFGIFMLLMAGLLVARDYLKPINREWPIQRTIVDAKGQGHTYGYAI 153

Query: 163 ------GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
                 G   G +SG  G+GGG +F  L++L +    + ATATS
Sbjct: 154 VPALAIGFAVGLISGLFGIGGGSLFVPLMVLLFRFPPHTATATS 197


>gi|154149849|ref|YP_001403467.1| hypothetical protein Mboo_0302 [Candidatus Methanoregula boonei
           6A8]
 gi|153998401|gb|ABS54824.1| protein of unknown function DUF81 [Methanoregula boonei 6A8]
          Length = 269

 Score = 43.1 bits (100), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 37/191 (19%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G ++ + G+GGG + VP L+  F   G D  I    A+GTSL V+  +S  + + +RR G
Sbjct: 15  GVIAAVIGLGGGFLYVPTLTLIF---GFDPRI----AVGTSLAVMVFSSFAATVVYRRQG 67

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI-----------FCLLMGILML 142
               ++L     V+ I ++  S M++ V  S+++    I           F +L+  L L
Sbjct: 68  ----RVLYKAAAVIAIPSIAFS-MLASVISSYIDTRLIIALFALALLAMSFEMLIPALHL 122

Query: 143 KRD-------RLYC------ERKFPDNYVK-YIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
            R         L C      E+     Y    +WG   GF+SG  G  GG +    ++  
Sbjct: 123 IRKIGIGPLMALSCRDLDGTEKIIQIPYAHLVVWGAFGGFVSGVTGTSGGAYFVPALVAL 182

Query: 189 GASIYKATATS 199
           G  ++ A ATS
Sbjct: 183 GVPVHWAVATS 193


>gi|62258425|gb|AAX77790.1| unknown protein [synthetic construct]
          Length = 287

 Score = 43.1 bits (100), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 11/128 (8%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD---SICMHVAMGTSLGVIAPTSVM 84
           +  F++  +S L G G GL+ VP    AF  + +     +  M +A+ T  G+      +
Sbjct: 34  IVGFVASFMSTLLGGGAGLIAVP----AFYFIIVHTYGPNFAMQIALATCCGMSIFLGSI 89

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  +H + G I++  LK ++  L I  ++ S+++ +++   L   FAI     GI M+  
Sbjct: 90  ATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIVKYINTELLKMVFAILLFGSGIWMI-- 147

Query: 145 DRLYCERK 152
             LY + K
Sbjct: 148 --LYNDNK 153


>gi|161830359|ref|YP_001597179.1| hypothetical protein COXBURSA331_A1485 [Coxiella burnetii RSA 331]
 gi|161762226|gb|ABX77868.1| putative membrane protein [Coxiella burnetii RSA 331]
          Length = 263

 Score = 43.1 bits (100), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 9/240 (3%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G + G+FG G GLVM P      +   +     M +A+ T+  V A   + +     ++
Sbjct: 17  AGLVYGIFGGGSGLVMTPGFYYVLRHFELAQGYQMQIAIATTAAVSALLGISATRVQWQN 76

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM--LKRDRLYCE 150
             I++ I K     L + T++  ++++ V  ++L + F +  +L+ + +    +DR   +
Sbjct: 77  NLIDLSIFKKIFPGLLVGTLLAIILLNIVPSAYLKRLFGLVVILVAVWLGFYHQDR---D 133

Query: 151 RKFPD--NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
            K     ++   I   + G L   LG+   +FT   +   G  + +A   +   S + + 
Sbjct: 134 TKTWSLFSFCNRIMTTIIGLLWFLLGIA--VFTVPYLHKCGVDLRRAIGCATLTSTVFSA 191

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            A  + I +G    G+    +GFVNI   +I L  S L     +KLS  + K +L I ++
Sbjct: 192 IAASLLIVTGLFKVGISGNHIGFVNIPLSIIALIPSALAAHWGSKLSVKLPKFHLKIVYA 251


>gi|134302790|ref|YP_001122758.1| hypothetical protein FTW_2011 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134050567|gb|ABO47638.1| hypothetical membrane protein [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 264

 Score = 43.1 bits (100), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 45/212 (21%), Positives = 100/212 (47%), Gaps = 3/212 (1%)

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
           I+D + M VA+ +++       +++ ++  ++  I    L+  +  + +  ++   +++ 
Sbjct: 48  INDHL-MQVAIASAVSSGISVGLLATLKQHKYKQICYDTLRWSLISILLGGILGVFLVNI 106

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
           +  S L   F+I  ++M   M ++ +   +       +K I   + G  +   G+   +F
Sbjct: 107 IKSSDLKIVFSILLIIMATWMWRKTKTTLKVWQAPLALKSIGAFLAGMFTMLSGIS--VF 164

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
              L+   G  I KA  TS  ++  I+    +  I  GW  + LPP+S+G++N+   L+ 
Sbjct: 165 FVPLLTKCGLDIRKAIGTSTIITFFISLVMSIFFISFGWHASNLPPYSIGYLNLIIFLVG 224

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           L  S++   +  K +    +KYL I + ++MF
Sbjct: 225 LIPSLIGVNIGVKATASFPQKYLQIIYILMMF 256


>gi|56708779|ref|YP_170675.1| hypothetical protein FTT_1789 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110671251|ref|YP_667808.1| hypothetical protein FTF1789 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224457990|ref|ZP_03666463.1| hypothetical protein FtultM_10476 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254371389|ref|ZP_04987390.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254875646|ref|ZP_05248356.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56605271|emb|CAG46422.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110321584|emb|CAL09805.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. tularensis FSC198]
 gi|151569628|gb|EDN35282.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254841645|gb|EET20081.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282160105|gb|ADA79496.1| hypothetical membrane protein [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 264

 Score = 43.1 bits (100), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 45/212 (21%), Positives = 100/212 (47%), Gaps = 3/212 (1%)

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
           I+D + M VA+ +++       +++ ++  ++  I    L+  +  + +  ++   +++ 
Sbjct: 48  INDHL-MQVAIASAVSSGISVGLLATLKQHKYKQICYDTLRWSLISILLGGILGVFLVNI 106

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
           +  S L   F+I  ++M   M ++ +   +       +K I   + G  +   G+   +F
Sbjct: 107 IKSSDLKIVFSILLIIMATWMWRKTKTTLKVWQAPLALKSIGAFLAGMFTMLSGIS--VF 164

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
              L+   G  I KA  TS  ++  I+    +  I  GW  + LPP+S+G++N+   L+ 
Sbjct: 165 FVPLLTKCGLDIRKAIGTSTIITFFISLVMSIFFISFGWHASNLPPYSIGYLNLIIFLVG 224

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           L  S++   +  K +    +KYL I + ++MF
Sbjct: 225 LIPSLIGVNIGVKATASFPQKYLQIIYILMMF 256


>gi|15678902|ref|NP_276019.1| hypothetical protein MTH882 [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2621976|gb|AAB85380.1| conserved protein [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 261

 Score = 43.1 bits (100), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 15/227 (6%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           VGGG ++ PVL    +  G    I +  A GTSL +I PT++     H R   ++ +I  
Sbjct: 28  VGGGFIIAPVLFFLMEAGGTPPDIAIRTAFGTSLAIILPTALSGAHSHYRRKCVDSRI-G 86

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI 161
             + VL     V  +  +    +++ +AF  F +L+  +++    L   R  P  + +  
Sbjct: 87  ITMGVLGACGSVAGVFTASASPAYVLRAF--FGVLL--ILVSAQLLLSSRISPSGFGRN- 141

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFY-----GASIYKATATSAGVSALIAFPALLVRIY 216
                GFL+G L    GI   ++++       G  + +A  TS+ V A  A    +  I+
Sbjct: 142 AAFPLGFLAGFLSGLLGIGGGVVLVPLLVMVAGFDVLEAVGTSSLVIAFTAASGTISYIF 201

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           +G G     P+++G+VN+   L+++ +S+  + L   +++ +  +Y+
Sbjct: 202 TGPG----GPFTVGYVNLLQFLLVIVMSVPSSRLGALIAHRVDVRYI 244


>gi|89072716|ref|ZP_01159281.1| predicted permease [Photobacterium sp. SKA34]
 gi|89051536|gb|EAR56990.1| predicted permease [Photobacterium sp. SKA34]
          Length = 254

 Score = 43.1 bits (100), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 18/178 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM--HVAMGTSLGVIAPTSVMS 85
           + S +S TL+ L G G GL+  P+L      +G+  SI +  H     +LGV A      
Sbjct: 11  IGSLISNTLASLSGGGAGLIQFPLLI----FLGLPFSIALATHKVASVALGVGAA----- 61

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            ++H R GT+++K     I    I  ++ + +I    ++    A  +  L +GI  L + 
Sbjct: 62  -IKHLRQGTLSLKFTVYVILTGAIGVIIGANLILSFPENIAEAALGMLILCLGIYSLTKK 120

Query: 146 RLYCERKFPDNYVK--YIWGM---VTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
            L          +K   I G+   + G L+G+L  G G+F  L L+ ++G +  +A A
Sbjct: 121 ELGQTETTQHRDMKGMVIGGLGLAIIGVLNGSLTAGTGLFVTLFLIRWFGFNYKQAVA 178


>gi|227535827|ref|ZP_03965876.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227244315|gb|EEI94330.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 108

 Score = 43.1 bits (100), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
           ++GL G GGG +++P L    +L        M  A+GTSL +I+  S+M F+    H ++
Sbjct: 2   ITGLIGAGGGFLIIPALVNLLKL-------PMKTAVGTSLVIISINSLMGFLFSLPHTSV 54

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
               L     +  I  ++ S + + +  S L  AF  F L+MGI ++ ++ L
Sbjct: 55  QWGFLLSIASIAIIGILIGSYLSTKIKASKLKPAFGWFVLVMGIYIIVKETL 106


>gi|120435315|ref|YP_861001.1| hypothetical protein GFO_0960 [Gramella forsetii KT0803]
 gi|117577465|emb|CAL65934.1| membrane protein containing DUF81 [Gramella forsetii KT0803]
          Length = 266

 Score = 42.7 bits (99), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 19/137 (13%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
            +D V     LII+   + G L+G+ G GGG +++P L        I   + M  A+ TS
Sbjct: 141 EEDKVSYNYPLIIIEGLVVGLLTGIVGAGGGFLIIPALV-------ILAKLPMKKAVATS 193

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV------VTSLMISHVDKSFLNK 128
           L +IA  S++ F+        N++I  DW F+L  T +      +   + + ++   L K
Sbjct: 194 LMIIAVKSLIGFIGDVE----NIEI--DWKFLLIFTGISIGGIWLGVYLNNFINGKKLKK 247

Query: 129 AFAIFCLLMGILMLKRD 145
            F  F LLMGI ++  +
Sbjct: 248 GFGWFVLLMGIYIIWSE 264


>gi|300696738|ref|YP_003747399.1| hypothetical protein RCFBP_mp10188 [Ralstonia solanacearum
           CFBP2957]
 gi|299073462|emb|CBJ52978.1| conserved membrane protein of unknown function, DUF81 [Ralstonia
           solanacearum CFBP2957]
          Length = 264

 Score = 42.7 bits (99), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 24/182 (13%)

Query: 58  LMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM 117
           L G+D     H+A GT+L +IAP  ++ F  + +H  + ++ +        ++T V +  
Sbjct: 41  LYGMDQ----HLAQGTALVMIAPNVLIGFWRYHQHHPVPLRSVATLCAFAMVSTYVAARF 96

Query: 118 ISHVDKSFLNKAFAIFCLLMGILMLK--RDRLYCE-------------RKFPDNYVKYIW 162
            + +D + L  AFA F + + +      RD+   +             R  P   +  + 
Sbjct: 97  AAGLDAAHLRTAFAWFLIALAVYFASQLRDKARPDAASVHPDPAPGAARAMPPAVLPLL- 155

Query: 163 GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVS---ALIAFPALLVRIYSG 218
           G+ +G +SG   VGGG +    L+  +G S  +A   +  ++   +LIA  A     +  
Sbjct: 156 GIASGGMSGIFTVGGGLVVVPALVTLFGMSQTRAQGMALALAVPGSLIALAAYAHAGHVN 215

Query: 219 WG 220
           WG
Sbjct: 216 WG 217


>gi|194292877|ref|YP_002008784.1| hypothetical protein RALTA_B2155 [Cupriavidus taiwanensis LMG
           19424]
 gi|193226781|emb|CAQ72732.1| conserved hypothetical protein; putative membrane protein
           [Cupriavidus taiwanensis LMG 19424]
          Length = 254

 Score = 42.7 bits (99), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 11/135 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           +P L   F   G+D      +A GT+L +IAP  ++ F ++R+   I ++          
Sbjct: 35  IPALGLLF---GMDQ----QLAQGTALVMIAPNVLIGFWQYRKRADIALRTAVVLGLSAV 87

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW----GM 164
           + T +++   + +D   L + FA+F + M +  L R         P   V   W    G+
Sbjct: 88  LATWLSARTATAMDAQLLRRIFALFMIGMALYFLWRLLPGRAVTAPQARVSARWIPMVGV 147

Query: 165 VTGFLSGALGVGGGI 179
           V G  SG   VGGG+
Sbjct: 148 VGGLFSGFFSVGGGV 162


>gi|251790354|ref|YP_003005075.1| hypothetical protein Dd1591_2772 [Dickeya zeae Ech1591]
 gi|247538975|gb|ACT07596.1| protein of unknown function DUF81 [Dickeya zeae Ech1591]
          Length = 254

 Score = 42.7 bits (99), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 4/129 (3%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G+   +  H+A GT+L +I P  ++ F+ +R+   I+ ++         ++  V 
Sbjct: 34  AIPVLGMLFGMNQHLAQGTALIMITPNVLIGFLRYRQRNKIDTRMTLMLCAFATVSAYVA 93

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW----GMVTGFLS 170
           + M + +    L +AFAIF L++    + +       + P + + + +    G+ +GF+S
Sbjct: 94  AHMAAAIQVDNLQQAFAIFLLVLATYYIWQWINSRRSRTPTSVLSHRYLPALGVASGFMS 153

Query: 171 GALGVGGGI 179
           G   VGGG+
Sbjct: 154 GIFTVGGGL 162


>gi|119952309|ref|YP_950104.1| putative integral membrane protein [Arthrobacter aurescens TC1]
 gi|42558685|gb|AAS20025.1| hypothetical membrane permease protein [Arthrobacter aurescens]
 gi|119951439|gb|ABM10349.1| putative integral membrane protein [Arthrobacter aurescens TC1]
          Length = 300

 Score = 42.7 bits (99), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 19/118 (16%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G ++GL G GGG ++VP L+    L+G    + M VA+GTSL VIA  S      +    
Sbjct: 148 GLITGLVGAGGGFLVVPALA----LLG---GLPMSVAVGTSLVVIAMKSFAGLAGYLT-- 198

Query: 94  TINMKILKDWIFVLPIT------TVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           T+ +    DW   L +T      +++ S +   + ++ L KAF +F L MG  +L + 
Sbjct: 199 TVQL----DWGITLGVTAAAIAGSLIGSKLAGRIPEAALRKAFGLFVLAMGTFVLIQQ 252


>gi|223995275|ref|XP_002287321.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220976437|gb|EED94764.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 298

 Score = 42.7 bits (99), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 11/123 (8%)

Query: 26  IIVASFL---SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           ++ ASF+   SG LSG+FGVGGG ++VP L        +   +  H A+GTSL  +   +
Sbjct: 182 LLPASFIGMFSGFLSGMFGVGGGAIVVPSLV-------LSTDMSHHTALGTSLCAMVLPA 234

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS-HVDKSFLNKAFAIFCLLMGILM 141
           ++    H + G +N ++         +   V    +  H+++  L   F+   L++G+  
Sbjct: 235 MVGTYTHAKRGNVNWRVGPLLALGSAVGAYVGGKEVGIHMEEGVLQAGFSCLMLVLGVKT 294

Query: 142 LKR 144
            ++
Sbjct: 295 WRK 297


>gi|327403119|ref|YP_004343957.1| hypothetical protein Fluta_1123 [Fluviicola taffensis DSM 16823]
 gi|327318627|gb|AEA43119.1| protein of unknown function DUF81 [Fluviicola taffensis DSM 16823]
          Length = 266

 Score = 42.7 bits (99), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 29/186 (15%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L   FQ+   D ++        SL ++  TS+   ++H +   IN+K     +F +P
Sbjct: 30  VPILVLFFQMEPKDATVY-------SLFIVGVTSLFGAIQHFKSKLINLK--NTLLFAIP 80

Query: 109 --ITTVVTSLM-------ISHVD-------KSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
             I+  +T L        I HV         +F+   F +  +L  I M+K  +     K
Sbjct: 81  AVISVSLTRLFVIPKLPPIIHVGDFIVFDLNTFIMGLFGLLMILAAIPMIKGQKELPSAK 140

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS---AGVSALIAF 208
                +  I+G + GF+SG +G GGG +    L +F    I  A ATS     +++L  F
Sbjct: 141 KNRPTILVIFGAIIGFISGLVGAGGGFMIIPSLSIFMKVPIKNAIATSIVIIAINSLSGF 200

Query: 209 PALLVR 214
            A L R
Sbjct: 201 TAELFR 206


>gi|329123459|ref|ZP_08252023.1| membrane protein [Haemophilus aegyptius ATCC 11116]
 gi|327471041|gb|EGF16496.1| membrane protein [Haemophilus aegyptius ATCC 11116]
          Length = 266

 Score = 42.7 bits (99), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 102/206 (49%), Gaps = 35/206 (16%)

Query: 12  VFLSKDCVVDY----ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
           +F+    + +Y    ICL+++ASF++G +  + G G GL+++P    AF ++G+   + +
Sbjct: 4   LFIDNSIIANYFILGICLLVIASFVAGYIDSIAG-GAGLILIP----AFLIVGLPPQLAL 58

Query: 68  -HVAMGTSLGVIAPTSVMSFMEHRR-----------HGTINMKILKDWIFVLPITTVVTS 115
               + +++G IA  ++ +FM+ +               +   I  + I +LP      +
Sbjct: 59  GQEKLVSTIGTIA--AIKNFMQSKSIVWKIIPIGIVSALLGAYIGAEVILMLP------T 110

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK-YIWGMVTGFLSGALG 174
            +I+++  +FL    A   L  G L+ + ++   E++  ++ +  +I  ++ GF  G  G
Sbjct: 111 HVINYIIFAFLPLGLAT-TLFKGKLLKQENQ---EQEIKNSALSVFITCLIVGFYDGFFG 166

Query: 175 VG-GGIFTNLLMLFYGASIYKATATS 199
            G G IF   L L    S+ +A+ATS
Sbjct: 167 PGTGSIFIIALFLINKLSLLRASATS 192


>gi|209527086|ref|ZP_03275601.1| protein of unknown function DUF81 [Arthrospira maxima CS-328]
 gi|209492514|gb|EDZ92854.1| protein of unknown function DUF81 [Arthrospira maxima CS-328]
          Length = 270

 Score = 42.7 bits (99), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 8/80 (10%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           +  +  Y+  +I  S L+G L+GLFGVGGG+++VP      Q++ + ++I   V++ TSL
Sbjct: 147 EKTINPYLAFMITGS-LAGLLAGLFGVGGGVIIVP-----LQILLLGETI--KVSIQTSL 198

Query: 76  GVIAPTSVMSFMEHRRHGTI 95
           GVI  T+  + + H   G +
Sbjct: 199 GVIIITAASACIGHAIQGNV 218



 Score = 35.4 bits (80), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 29/208 (13%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
            G+GGG V+VP+L        +      + A+ TS+  +  T++   +++ R G + +K 
Sbjct: 30  LGIGGGTVLVPIL--------VTLGYVSNQAVATSIFSVLITAISGSIQNWRMGFLRVKR 81

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN--- 156
           +    F   IT ++ S +   +  S+L   F    LL   L+  R  +  +++  +    
Sbjct: 82  VISIGFSAVITAILGSYIADLLPSSWLLFGFGCLLLLNIYLVKVRQDIIAKKQLDEQLNP 141

Query: 157 -----------YVKY-IWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVS 203
                      Y+ + I G + G L+G  GVGGG I   L +L  G +I  +  TS GV 
Sbjct: 142 GSTQPEKTINPYLAFMITGSLAGLLAGLFGVGGGVIIVPLQILLLGETIKVSIQTSLGVI 201

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGF 231
            + A  A +     G  + G   W  GF
Sbjct: 202 IITAASACI-----GHAIQGNVLWGQGF 224


>gi|328675526|gb|AEB28201.1| hypothetical protein FN3523_0344 [Francisella cf. novicida 3523]
          Length = 252

 Score = 42.7 bits (99), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 7/121 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD---SICMHVAMGTSLGVIAPTSVM 84
           +  F++  +S L G G GL+ VP    AF  + +        M +A+ T  G+    S +
Sbjct: 8   IVGFVASFISTLLGGGAGLIAVP----AFYFIIVHTYGADFAMQIAIATCCGMSIFLSSI 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  +H R G I++  LK ++  L I  +V S++  +++   L   FAI     GI M+  
Sbjct: 64  ATYKHYRKGNIHLGELKYYLVYLSIGALVGSIVAKYINTDLLKIVFAILLFGSGIWMILH 123

Query: 145 D 145
           +
Sbjct: 124 N 124


>gi|218295674|ref|ZP_03496470.1| protein of unknown function DUF81 [Thermus aquaticus Y51MC23]
 gi|218243833|gb|EED10360.1| protein of unknown function DUF81 [Thermus aquaticus Y51MC23]
          Length = 246

 Score = 42.7 bits (99), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 8/124 (6%)

Query: 12  VFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
           V L +  V   + L++  +F +G LSG+ GVGGG +MVP +     L+G    +  H A 
Sbjct: 119 VGLVRGEVAQGLTLLLAGAF-TGFLSGMMGVGGGTIMVPAM---VLLLG----MAQHTAQ 170

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
           GTSL  + P S +    H R G +   ++   +  + + T +   +   + +  L   FA
Sbjct: 171 GTSLLAMVPASFVGAYTHFRLGNVERDLVPGLVPGVLLGTFLGGELAHFLPEGGLRGVFA 230

Query: 132 IFCL 135
              L
Sbjct: 231 AVLL 234


>gi|152976051|ref|YP_001375568.1| hypothetical protein Bcer98_2327 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152024803|gb|ABS22573.1| protein of unknown function DUF81 [Bacillus cytotoxicus NVH 391-98]
          Length = 249

 Score = 42.4 bits (98), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 46/221 (20%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + +H+A+ TSL  +A T++   + H R G +++KI         I + V S   + +  
Sbjct: 34  QVPVHIALATSLTAMAFTTLSGVVSHYREGNVSLKIGGVVGIFGAIGSYVGSQFGAVIPA 93

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK----------YIWGMVTGFLSGAL 173
             L+   A    L  I M  R  LY   +   N+ K           + G+VTG L+GA 
Sbjct: 94  QLLHWFTASMLFLSAICMCIR-LLYFHNQSKMNHEKGLSITILVKSMLLGLVTGSLAGAF 152

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I +    S G + LI  P   + I  G G +     S G++
Sbjct: 153 GIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLIILP---IAIGGGIGYS-----SAGYL 200

Query: 233 N--------IGAVL--------------IILPISILITPLA 251
           N        IG +L              I+L +S++ITP+A
Sbjct: 201 NYVLLVQVLIGTMLGAYLGAKFTNFAPRIVLKLSMIITPIA 241


>gi|212212286|ref|YP_002303222.1| hypothetical membrane spanning protein [Coxiella burnetii
           CbuG_Q212]
 gi|212010696|gb|ACJ18077.1| hypothetical membrane spanning protein [Coxiella burnetii
           CbuG_Q212]
          Length = 263

 Score = 42.4 bits (98), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 109/240 (45%), Gaps = 9/240 (3%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G + G+FG G GLVM P      +   +  +  M +A+ T+  V A   + +     ++
Sbjct: 17  AGLVYGIFGGGSGLVMTPGFYYVLRHFELAQAYQMQIAIATTAAVSALLGISATRVQWQN 76

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM--LKRDRLYCE 150
             I++ I K     L + T++  ++++ V  ++L + F +  +L+ + +    +DR   +
Sbjct: 77  NLIDLSIFKKIFPGLLVGTLLAIILLNIVPSAYLKRLFGLVVILVAVWLGFYHQDR---D 133

Query: 151 RKFPD--NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
            K     ++   I   + G L   LG+   +FT   +   G  + +A   +   S + + 
Sbjct: 134 TKTWSLFSFCNRIMTTIIGLLWFLLGI--AVFTVPYLHKCGVDLRRAIGCATLTSTVFSA 191

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            A  + + +G    G+    +GFVNI   +I L  S L     +KLS  + K +L I ++
Sbjct: 192 IAASLLMVTGLFKVGISGNHIGFVNIPLSIIALIPSALAAHWGSKLSVKLPKFHLKIVYA 251


>gi|255659129|ref|ZP_05404538.1| putative membrane protein [Mitsuokella multacida DSM 20544]
 gi|260848575|gb|EEX68582.1| putative membrane protein [Mitsuokella multacida DSM 20544]
          Length = 263

 Score = 42.4 bits (98), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 24/183 (13%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           GT   L G+GGGL+ VP+    F L   D  +  +         IA TS++  M +   G
Sbjct: 14  GTFGTLVGIGGGLICVPI----FILFLSDGGVYPYFHTAAQ---IAGTSLVVVMANAMSG 66

Query: 94  TINMKILKDWIFVLPITTVVTSL--------MISHVDKSFLNKAFAIFCLLMGILML--- 142
           T+     K  +F   I   + +L        +++      L+  F IF LLM I+M    
Sbjct: 67  TLAYIRQKRVLFSAAIPFAIATLPGAVLGSWIVNKFSTPMLDLYFGIFLLLMSIIMYWNS 126

Query: 143 KRDRLYCERKFPDNY-----VKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKAT 196
               +    + P ++     +  +  +  GFLS   G+GGG+    LM++  G  ++ AT
Sbjct: 127 THKPVSNIMELPKDFQYNRTLGIVASLGVGFLSSIFGIGGGVIHVPLMIYLLGFPVHVAT 186

Query: 197 ATS 199
           ATS
Sbjct: 187 ATS 189


>gi|300770023|ref|ZP_07079902.1| conserved hypothetical transmembrane protein [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300762499|gb|EFK59316.1| conserved hypothetical transmembrane protein [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 265

 Score = 42.4 bits (98), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 24/142 (16%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
           F+++    D   +I+  +FL G ++G+ G GGG +++P L        +   + M  A+G
Sbjct: 135 FVAEKQRYDNKSIILKGAFL-GVITGMVGAGGGFLIIPTLV-------LFAGMQMKKAIG 186

Query: 73  TSLGVIAPTSVMSFM---EHRRHGTINMKILKDW--IFVLPITTV----VTSLMISHVDK 123
           TSL +IA  S++ F+   E   H         DW  +F+  I  +    + +L+   +  
Sbjct: 187 TSLMIIAFNSLIGFIGFVEIDGHEV-------DWRLLFLFSIAAIMGILIGTLLSRKISG 239

Query: 124 SFLNKAFAIFCLLMGILMLKRD 145
           S L  +F  F L+MGI++L R+
Sbjct: 240 SNLKISFGWFVLIMGIMILVRE 261


>gi|284053233|ref|ZP_06383443.1| hypothetical protein AplaP_17354 [Arthrospira platensis str.
           Paraca]
 gi|291565874|dbj|BAI88146.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 270

 Score = 42.4 bits (98), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 8/80 (10%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           +  +  Y+  +I  S L+G L+GLFGVGGG+++VP      Q++ + ++I   V++ TSL
Sbjct: 147 QKTMNPYLAFMITGS-LAGLLAGLFGVGGGVIIVP-----LQILLLGETI--KVSIQTSL 198

Query: 76  GVIAPTSVMSFMEHRRHGTI 95
           GVI  T+  + + H   G +
Sbjct: 199 GVIIITAASACIGHAIQGNV 218



 Score = 42.0 bits (97), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 24/191 (12%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +A   +G L+G  G+GGG V+VP+L        +      + A+ TS+  +  T++   +
Sbjct: 18  IAGLFAGILAGFLGIGGGTVLVPIL--------VTLGYVSNQAVATSIFSVLITAISGSI 69

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
           ++ R G + +K +    F   IT ++ S + + +  S+L   F    LL   L+  R  +
Sbjct: 70  QNWRMGFLRVKRVILIGFPAVITAIIGSYLANLLPSSWLLFGFGCLLLLNIYLIKVRQDI 129

Query: 148 YCERKFPDN--------------YVKY-IWGMVTGFLSGALGVGGG-IFTNLLMLFYGAS 191
             +++  +               Y+ + I G + G L+G  GVGGG I   L +L  G +
Sbjct: 130 IAKKQLDEQLNSTSPQPQKTMNPYLAFMITGSLAGLLAGLFGVGGGVIIVPLQILLLGET 189

Query: 192 IYKATATSAGV 202
           I  +  TS GV
Sbjct: 190 IKVSIQTSLGV 200


>gi|126465319|ref|YP_001040428.1| hypothetical protein Smar_0408 [Staphylothermus marinus F1]
 gi|126014142|gb|ABN69520.1| protein of unknown function DUF81 [Staphylothermus marinus F1]
          Length = 250

 Score = 42.4 bits (98), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 29/215 (13%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G +S + G+GGG +M+P     F ++ ++  +    A+ TSL  I  TS  +   + R  
Sbjct: 15  GFVSAIVGIGGGTLMIP-----FMVLILNYDV--KEAIATSLVSIIVTSSSASSIYLRRR 67

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSF----LNKAFAIFCLLMGILMLKRDRLYC 149
            +++K      F+L  +T   +++ +++  S     +  AF++  L + I ML RD L  
Sbjct: 68  DVDLK----TAFLLEPSTAAGAIVGAYLTISLPTRIVETAFSLLLLYVSISML-RDALRR 122

Query: 150 ERKFPDNY--------VKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA 200
           +     NY        V  +   + G  SG LG+GGG+    LM +  G  I  A ATS+
Sbjct: 123 KEIETGNYKVSRQRRGVGVLIAFLAGLTSGMLGIGGGVLKVPLMTMVLGLPIRTAIATSS 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
            +  L A    LV +  G+    + P+++  + +G
Sbjct: 183 FMVGLTASAGSLVYLLKGY----VNPYAVASLALG 213


>gi|225618982|ref|YP_002720208.1| transporter/membrane [Brachyspira hyodysenteriae WA1]
 gi|225213801|gb|ACN82535.1| transporter/membrane [Brachyspira hyodysenteriae WA1]
          Length = 255

 Score = 42.4 bits (98), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 23/155 (14%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +P    A+ + GI      H A+ T+       +++S     ++G +  K++K 
Sbjct: 26  GGGLISLP----AYLIAGIPP----HTALATNKFTSTSGAIVSAFTFFKNGKLTSKLIK- 76

Query: 103 WIFVLPIT---TVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK 159
             F++P+T   ++V   +I  +D   L     I  L +GI  L       E KF +N +K
Sbjct: 77  --FLIPMTILGSIVGVQVIVLIDAKILQPLIMILILAVGIYTLFSKTFGTENKFDENNLK 134

Query: 160 ---YIWGM----VTGFLSGALGVGGGIFTNLLMLF 187
              YI GM    + GF     G G G F  L+M F
Sbjct: 135 TKNYIIGMFFAFLLGFYDAVFGPGTGSF--LIMFF 167


>gi|89255772|ref|YP_513134.1| hypothetical protein FTL_0347 [Francisella tularensis subsp.
           holarctica LVS]
 gi|167009703|ref|ZP_02274634.1| hypothetical protein Ftulh_03024 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|89143603|emb|CAJ78787.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. holarctica LVS]
          Length = 192

 Score = 42.4 bits (98), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 11/128 (8%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD---SICMHVAMGTSLGVIAPTSVM 84
           +  F++  +S L G G GL+ VP    AF  + +     +  M +A+ T  G+      +
Sbjct: 8   IVGFVASFMSTLLGGGAGLIAVP----AFYFIIVHTYGPNFAMQIALATCCGMSIFLGSI 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  +H + G I++  LK ++  L I  ++ S++  +++   L   FAI     GI M+  
Sbjct: 64  ATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKYINTELLKMVFAILLFGSGIWMI-- 121

Query: 145 DRLYCERK 152
             LY + K
Sbjct: 122 --LYNDNK 127


>gi|134302250|ref|YP_001122219.1| hypothetical protein FTW_1334 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134050027|gb|ABO47098.1| hypothetical membrane protein [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 252

 Score = 42.4 bits (98), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 15/128 (11%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD---SICMHVAMGTSLGVIAPTSVM 84
           VASF+S  L G    G GL+ VP    AF  + +     +  M +A+ T  G+      +
Sbjct: 12  VASFMSTLLGG----GAGLIAVP----AFYFIIVHTYGPNFAMQIALATCCGMSIFLGSI 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  +H + G I++  LK ++  L I  ++ S++  +++   L   FAI     GI M+  
Sbjct: 64  ATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKYINTELLKMVFAILLFGSGIWMI-- 121

Query: 145 DRLYCERK 152
             LY + K
Sbjct: 122 --LYNDNK 127


>gi|126458964|ref|YP_001055242.1| hypothetical protein Pcal_0341 [Pyrobaculum calidifontis JCM 11548]
 gi|126248685|gb|ABO07776.1| protein of unknown function DUF81 [Pyrobaculum calidifontis JCM
           11548]
          Length = 244

 Score = 42.4 bits (98), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 16/123 (13%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F  G  S LFGVGGG V VP L  A   MG D       A  +S+G+I PT+V S + + 
Sbjct: 128 FAGGLASALFGVGGGTVFVPALVLA---MGFDA----KAAAASSMGIILPTAVASTLMYA 180

Query: 91  RHGTINMKI-----LKDWIFVLPITT-VVTSLMISHVDKSFLNKAFAI---FCLLMGILM 141
             G +++ +     L  +I     +  ++  L   HV K F+   FA+   +    G L+
Sbjct: 181 SLGVLDVVLGVAVALGSFIGAFVASRYIMPRLKSQHVRKMFVGYVFAVGAYYLFSTGALL 240

Query: 142 LKR 144
             R
Sbjct: 241 FSR 243


>gi|269216459|ref|ZP_06160313.1| hypothetical membrane protein, conserved, DUF81 family [Slackia
          exigua ATCC 700122]
 gi|269129988|gb|EEZ61070.1| hypothetical membrane protein, conserved, DUF81 family [Slackia
          exigua ATCC 700122]
          Length = 297

 Score = 42.4 bits (98), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 7/66 (10%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+ G+GGG VMVP+   AF   G+D       A  TSL  I PTS+    +H R+G
Sbjct: 15 GILSGMLGIGGGTVMVPLFRLAF---GLDP----LAATATSLFSIIPTSLAGLSKHLRNG 67

Query: 94 TINMKI 99
          T   +I
Sbjct: 68 TCIPRI 73


>gi|254367217|ref|ZP_04983247.1| hypothetical protein FTHG_00420 [Francisella tularensis subsp.
           holarctica 257]
 gi|134253037|gb|EBA52131.1| hypothetical protein FTHG_00420 [Francisella tularensis subsp.
           holarctica 257]
          Length = 193

 Score = 42.4 bits (98), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 11/128 (8%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD---SICMHVAMGTSLGVIAPTSVM 84
           +  F++  +S L G G GL+ VP    AF  + +     +  M +A+ T  G+      +
Sbjct: 13  IVGFVASFMSTLLGGGAGLIAVP----AFYFIIVHTYGPNFAMQIALATCCGMSIFLGSI 68

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  +H + G I++  LK ++  L I  ++ S++  +++   L   FAI     GI M+  
Sbjct: 69  ATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKYINTELLKMVFAILLFGSGIWMI-- 126

Query: 145 DRLYCERK 152
             LY + K
Sbjct: 127 --LYNDNK 132


>gi|254369043|ref|ZP_04985056.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157121964|gb|EDO66134.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 252

 Score = 42.0 bits (97), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 15/128 (11%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD---SICMHVAMGTSLGVIAPTSVM 84
           VASF+S  L G    G GL+ VP    AF  + +     +  M +A+ T  G+      +
Sbjct: 12  VASFMSTLLGG----GAGLIAVP----AFYFIIVHTYGPNFAMQIALATCCGMSIFLGSI 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  +H + G I++  LK ++  L I  ++ S++  +++   L   FAI     GI M+  
Sbjct: 64  ATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKYINTELLKMVFAILLFGSGIWMI-- 121

Query: 145 DRLYCERK 152
             LY + K
Sbjct: 122 --LYNDNK 127


>gi|261346198|ref|ZP_05973842.1| inner membrane protein YfcA [Providencia rustigianii DSM 4541]
 gi|282565854|gb|EFB71389.1| inner membrane protein YfcA [Providencia rustigianii DSM 4541]
          Length = 267

 Score = 42.0 bits (97), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 26/191 (13%)

Query: 91  RHGTINMKILKDWIFVLPITTV---VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
           R   IN   L++ IF   +T +   + +++I  +D +FL +   +  + +G+  L    +
Sbjct: 71  RRKAIN---LREQIFPFVMTMIGAMLGAILIQSIDTAFLKQLLPVMVICVGVYFLLTPSI 127

Query: 148 YCERKFPDNYVKYIWG----MVTGFLSGALGVGGGIFTNLL-MLFYGASIYKATATSAGV 202
             + + P      I+G    M  GF  GA G G G F  L  +L  G ++ KATA +  +
Sbjct: 128 GVKDR-PQRVSMPIFGVAAGMTMGFYDGAFGPGTGSFLALAYVLLLGYNLAKATAHAKLL 186

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILPISILITPLATK 253
           +    F +L+  I  G  L     WSLGFV          +GA L++     LI P+   
Sbjct: 187 NFASNFGSLIFFIIGGHVL-----WSLGFVMLAGQMLGARLGARLVLTKGQKLIRPMIVV 241

Query: 254 LSYMIGKKYLT 264
           +S ++  K L 
Sbjct: 242 ISLLMSIKLLN 252


>gi|307544236|ref|YP_003896715.1| hypothetical protein HELO_1646 [Halomonas elongata DSM 2581]
 gi|307216260|emb|CBV41530.1| K07090 [Halomonas elongata DSM 2581]
          Length = 269

 Score = 42.0 bits (97), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 13/198 (6%)

Query: 48  MVPVLSKAF-QLMGIDDSI---CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDW 103
           MVP+L        G D ++    MH+A+ TS  V+   + ++   H R GT++ + ++  
Sbjct: 27  MVPLLYAVLLATHGADSAVGQVAMHIAVATSTSVMIVGAGLATRRHHRAGTLDWRWIRPL 86

Query: 104 IFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD----RLYCERKFPDNYVK 159
           +  + I  +  +     +   ++  AF  +  +  +  L R           + P N   
Sbjct: 87  VGYIAIGAIAGAATAMAMRGDWVRWAFIAYLAITILDALLRPGFLAHTAAPPRTPSNGAM 146

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS---ALIAFPALLVRIY 216
            ++G+  G ++  LGVGG + T  LM   G  + +ATA +  +S   AL    A ++   
Sbjct: 147 AVFGLGIGMVAALLGVGGSVMTVPLMRRRGLPMARATAMATPLSLPMALAGTAAYMLLAR 206

Query: 217 SGWGLNGLPPWSLGFVNI 234
               + G  PW  G+V++
Sbjct: 207 GELAVQG--PWQAGYVDL 222


>gi|269120337|ref|YP_003308514.1| hypothetical protein Sterm_1725 [Sebaldella termitidis ATCC 33386]
 gi|268614215|gb|ACZ08583.1| protein of unknown function DUF81 [Sebaldella termitidis ATCC
           33386]
          Length = 242

 Score = 42.0 bits (97), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 64/121 (52%), Gaps = 7/121 (5%)

Query: 82  SVMSFMEHRRHGTINMKI-LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +V+S  ++ +   I+ +  +K  + ++P  + + +  I++V +SF+N  +     ++  L
Sbjct: 51  AVISVYKYNKSKKIDFRTGIKAGLLIVP-GSYIGTFAIAYVAESFINFTYLFVLFILICL 109

Query: 141 MLKRDRLYCERKFPDNYV-KYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATAT 198
           M  +++++   K   NY  K I  +V GF +G LG+GGG F   LLM  +   I K   T
Sbjct: 110 MFFKEKIH---KIEINYFFKLIISLVIGFCAGILGIGGGPFLIPLLMFVFHTEIKKIPGT 166

Query: 199 S 199
           S
Sbjct: 167 S 167


>gi|86141473|ref|ZP_01060019.1| membrane protein, putative [Leeuwenhoekiella blandensis MED217]
 gi|295133642|ref|YP_003584318.1| hypothetical protein ZPR_1792 [Zunongwangia profunda SM-A87]
 gi|85832032|gb|EAQ50487.1| membrane protein, putative [Leeuwenhoekiella blandensis MED217]
 gi|294981657|gb|ADF52122.1| membrane protein, putative [Zunongwangia profunda SM-A87]
          Length = 267

 Score = 42.0 bits (97), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 20/131 (15%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +Y+ L +   F+ G ++G+ G GGG +++P L    +L        M  A+ TSL +IA 
Sbjct: 148 NYLLLSVQGLFI-GVVTGMVGAGGGFLIIPALVLLAKL-------PMKKAVATSLFIIAI 199

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTV-VTSLMI-----SHVDKSFLNKAFAIFC 134
            S++ F+   ++  I      DW F+L  T + +  + I       +D   L KAF  F 
Sbjct: 200 NSLIGFLGDVQNLDI------DWPFLLIFTGISIVGIFIGIWLNKFIDGKKLKKAFGWFV 253

Query: 135 LLMGILMLKRD 145
           L+MG+ ++ ++
Sbjct: 254 LIMGVYIIYKE 264


>gi|20093583|ref|NP_613430.1| permease [Methanopyrus kandleri AV19]
 gi|19886439|gb|AAM01360.1| Predicted permease [Methanopyrus kandleri AV19]
          Length = 252

 Score = 42.0 bits (97), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 100/241 (41%), Gaps = 20/241 (8%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L G +SG+FGVGGG ++VP+L+           + MH+A+GT+L  I+         H +
Sbjct: 16  LVGLVSGMFGVGGGFLLVPLLN--------STGMPMHLALGTTLLAISLGGFTGAYRHLQ 67

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
            G +++     +     +   V S +     +  L  A  + C  M + M          
Sbjct: 68  EGNVHVDAAPIFGLSAIVGAQVGSYLACLTPEHVLKVALGVACSAMALRMAFDGETEEGN 127

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK-ATATSAGVSALIAFPA 210
           +  DN        +TGF  GA     G    +L +   AS+    T  + G S++I   +
Sbjct: 128 EIRDNIAV---ASLTGFGVGAFSGFTGSGGGVLFVPVMASVLNFPTMLAIGTSSVIVPVS 184

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            L              W  G+VN  A L ++   ++ + +  +LS  IG + +   FS++
Sbjct: 185 ALA--------GAAQYWMEGYVNFWAALAVVTGMLISSYVGAELSNKIGGERVKRAFSVV 236

Query: 271 M 271
           +
Sbjct: 237 L 237


>gi|90021311|ref|YP_527138.1| hypothetical protein Sde_1666 [Saccharophagus degradans 2-40]
 gi|89950911|gb|ABD80926.1| protein of unknown function DUF81 [Saccharophagus degradans 2-40]
          Length = 261

 Score = 42.0 bits (97), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 29/166 (17%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           GL GVGGG +M P+L     L G+ + I    A+GT L   A T   +   H R GTI  
Sbjct: 18  GLTGVGGGSLMTPLL----ILSGVPEKI----AIGTDLLYAAATKTGAMHAHHRQGTIRW 69

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSF-------LNKAFAIFCLLMGILMLKRDRLYCE 150
           +I    + +L   ++  SL+ S++  ++       L+    +  +L G+++  + RL  E
Sbjct: 70  QI----VLMLAAGSLPASLITSYILNTWDFDYGPRLSNILGVMLILTGVVVFLKQRLQGE 125

Query: 151 RKFPDNYVKYIWGM---VTGFLSGALG-------VGGGIFTNLLML 186
               +  V ++      +T F   ALG       VG G F   L+L
Sbjct: 126 TSATELSVGWVHKHSKSITFFAGIALGVFVTLSSVGAGAFCAALLL 171


>gi|50122123|ref|YP_051290.1| hypothetical protein ECA3201 [Pectobacterium atrosepticum SCRI1043]
 gi|49612649|emb|CAG76099.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
          Length = 245

 Score = 42.0 bits (97), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 10/119 (8%)

Query: 58  LMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM 117
           L G+D     H+A GT+L +I P  ++ F+ +R+   I+ ++          +  + + +
Sbjct: 32  LFGMDQ----HMAQGTALVMITPNVLIGFLRYRQRNRIDTRVALTMCAFATGSAYLAAHI 87

Query: 118 ISHVDKSFLNKAFAIFCLLMGILML-----KRDRLYCERKFPDNYVKYIWGMVTGFLSG 171
            S +D   L +AFA F L++    +     K+     E      Y+  + G+ +GF+SG
Sbjct: 88  ASSIDVHHLQRAFATFLLVLAAYYMWQWYNKKRSQRSEIVLSTKYLPLL-GVASGFMSG 145


>gi|227826493|ref|YP_002828272.1| hypothetical protein M1425_0082 [Sulfolobus islandicus M.14.25]
 gi|229583655|ref|YP_002842156.1| hypothetical protein M1627_0082 [Sulfolobus islandicus M.16.27]
 gi|238618561|ref|YP_002913386.1| protein of unknown function DUF81 [Sulfolobus islandicus M.16.4]
 gi|227458288|gb|ACP36974.1| protein of unknown function DUF81 [Sulfolobus islandicus M.14.25]
 gi|228018704|gb|ACP54111.1| protein of unknown function DUF81 [Sulfolobus islandicus M.16.27]
 gi|238379630|gb|ACR40718.1| protein of unknown function DUF81 [Sulfolobus islandicus M.16.4]
          Length = 293

 Score = 42.0 bits (97), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 10/145 (6%)

Query: 3   DLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGID 62
            +L N S  + L +   +D +   I A FL G  SG FG+GGG ++VP L  +    G+D
Sbjct: 150 SILSNNSHKLTLRERIKIDKV---IPAGFLVGFASGYFGIGGGFLVVPGLLFS---TGLD 203

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
               M  A+GTSL  +    V + + +  +G +++ I   ++          S + S + 
Sbjct: 204 ----MLRAVGTSLIAVGTFGVAAAITYAVYGYVDIVISLLYLVGGVAGGYAGSAIASRMP 259

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRL 147
           +  L K FAI  +L+ I  +  +R+
Sbjct: 260 RQTLRKLFAIIIILVAIYTMYVNRV 284


>gi|156936864|ref|YP_001434660.1| hypothetical protein Igni_0069 [Ignicoccus hospitalis KIN4/I]
 gi|156565848|gb|ABU81253.1| protein of unknown function DUF81 [Ignicoccus hospitalis KIN4/I]
          Length = 240

 Score = 42.0 bits (97), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 19/196 (9%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           S L+G ++ LFGVGGG++ +PV+     L+G+        A+ T+  +I  ++++S   H
Sbjct: 9   SVLTGIVASLFGVGGGVLAIPVM---VLLLGLSPP----EAVATNSVIIIVSTLLSAFFH 61

Query: 90  RRHGTINMKILKDWIFVLPIT-TVVTSLMISHVDK-SFLNKAFAIFCLLMGILML----K 143
            R GT+  +    WI V  +  T++ + +  ++ K   +     I  +L+GILM+    K
Sbjct: 62  WRQGTLRKE--GVWIGVGGVLGTLLGNALFLYISKVGAMKTVLGISFILIGILMMLDITK 119

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
           R +    + F    +  I G   G  +  +G+ GG+  N +++  G  I  A   S    
Sbjct: 120 RSQ---TKSFTAKSLAVI-GFFGGTFAALVGMSGGVLLNPILVLLGVDIKYAIGMSVTAL 175

Query: 204 ALIAFPALLVRIYSGW 219
            LI   + + ++ +G+
Sbjct: 176 PLITVASAIPKVLAGY 191



 Score = 40.8 bits (94), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V  F  GT + L G+ GG+++ P+L     L+G+D    +  A+G S+  +   +V S +
Sbjct: 133 VIGFFGGTFAALVGMSGGVLLNPIL----VLLGVD----IKYAIGMSVTALPLITVASAI 184

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                G   + +   WI  L I T + + ++  +    L +AF IF +L+GI +L
Sbjct: 185 PKVLAGYAKLDVAAVWIPGLIIGTKIGARLMKTMKSKTLKRAFGIFMILIGIKLL 239


>gi|91217130|ref|ZP_01254092.1| hypothetical protein P700755_04018 [Psychroflexus torquis ATCC
           700755]
 gi|91184730|gb|EAS71111.1| hypothetical protein P700755_04018 [Psychroflexus torquis ATCC
           700755]
          Length = 269

 Score = 42.0 bits (97), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 19/127 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LII+   + G L+G+ G GGG +++P L    +L        M  A+ TSL +IA  S++
Sbjct: 153 LIIIEGVVVGALTGIVGAGGGFLIIPALVLLAKL-------PMKKAVATSLLIIAVKSLI 205

Query: 85  SFMEHRRHGTINMKILKDWIFV-----LPITTVVTSLMISH-VDKSFLNKAFAIFCLLMG 138
            F+   +    N++I  DW F+     L +  +   + ++  +D   L K F  F  LMG
Sbjct: 206 GFLGDVQ----NIEI--DWSFLGLFTGLSVAGIFIGIWLNKFIDGKKLKKGFGWFVFLMG 259

Query: 139 ILMLKRD 145
           + ++ ++
Sbjct: 260 VYIVYKE 266


>gi|294500683|ref|YP_003564383.1| hypothetical protein BMQ_3937 [Bacillus megaterium QM B1551]
 gi|294350620|gb|ADE70949.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
          Length = 254

 Score = 42.0 bits (97), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 23/169 (13%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           GTL GL GVGG  ++ P+L     ++GI+ SI    A+GT L   + T +    +H +  
Sbjct: 13  GTLVGLTGVGGAALLTPLLI----VLGINPSI----AVGTDLVYNSITKLFGVAQHYKQR 64

Query: 94  TINMKILKDWIF------VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR--- 144
           TIN K+ K   F      VL I T+          ++ +  A      L+ I ++ R   
Sbjct: 65  TINFKLAKYLAFGSIPSAVLAIVTLHAFPSFHEHQETIIKHALGYVMTLVAISIIFRVFF 124

Query: 145 DRLYCERKFPD---NYVKYIW---GMVTGFLSGALGVGGGIFTNLLMLF 187
           D+     +F +   N  K +    G+V GF+ G   +G G    + ML+
Sbjct: 125 DKFIRPNRFQEMDLNQKKGLTIGIGVVFGFIVGLTSIGSGSLFAIAMLY 173


>gi|29654630|ref|NP_820322.1| hypothetical membrane spanning protein [Coxiella burnetii RSA 493]
 gi|153208945|ref|ZP_01947158.1| putative membrane protein [Coxiella burnetii 'MSU Goat Q177']
 gi|154706451|ref|YP_001424768.1| hypothetical membrane spanning protein [Coxiella burnetii Dugway
           5J108-111]
 gi|165924104|ref|ZP_02219936.1| putative membrane protein [Coxiella burnetii RSA 334]
 gi|212218744|ref|YP_002305531.1| hypothetical membrane spanning protein [Coxiella burnetii
           CbuK_Q154]
 gi|29541898|gb|AAO90836.1| hypothetical membrane spanning protein [Coxiella burnetii RSA 493]
 gi|120575603|gb|EAX32227.1| putative membrane protein [Coxiella burnetii 'MSU Goat Q177']
 gi|154355737|gb|ABS77199.1| hypothetical membrane spanning protein [Coxiella burnetii Dugway
           5J108-111]
 gi|165916460|gb|EDR35064.1| putative membrane protein [Coxiella burnetii RSA 334]
 gi|212013006|gb|ACJ20386.1| hypothetical membrane spanning protein [Coxiella burnetii
           CbuK_Q154]
          Length = 263

 Score = 42.0 bits (97), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 108/240 (45%), Gaps = 9/240 (3%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G + G+FG G GLVM P      +   +     M +A+ T+  V A   + +     ++
Sbjct: 17  AGLVYGIFGGGSGLVMTPGFYYVLRHFELAQGYQMQIAIATTAAVSALLGISATRVQWQN 76

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM--LKRDRLYCE 150
             I++ I K     L + T++  ++++ V  ++L + F +  +L+ + +    +DR   +
Sbjct: 77  NLIDLSIFKKIFPGLLVGTLLAIILLNIVPSAYLKRLFGLVVILVAVWLGFYHQDR---D 133

Query: 151 RKFPD--NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
            K     ++   I   + G L   LG+   +FT   +   G  + +A   +   S + + 
Sbjct: 134 TKTWSLFSFCNRIMTTIIGLLWFLLGIA--VFTVPYLHKCGVDLRRAIGCATLTSTVFSA 191

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            A  + + +G    G+    +GFVNI   +I L  S L     +KLS  + K +L I ++
Sbjct: 192 IAASLLMVTGLFKVGISGNHIGFVNIPLSIIALIPSALAAHWGSKLSVKLPKFHLKIVYA 251


>gi|328676450|gb|AEB27320.1| hypothetical protein FNFX1_0372 [Francisella cf. novicida Fx1]
          Length = 252

 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 11/121 (9%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGID---DSICMHVAMGTSLGVIAPTSVM 84
           VASF+S  L G    G GL+ VP    AF  + +     +  M +A+ T  G+      +
Sbjct: 12  VASFMSTLLGG----GAGLIAVP----AFYFIIVHTYGSNFAMQIALATCCGMSIFLGSI 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  +H + G I++  LK ++  L I  ++ S++  +++   L   FAI     GI M+  
Sbjct: 64  ATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKYINTELLKMVFAILLFGSGIWMILH 123

Query: 145 D 145
           +
Sbjct: 124 N 124


>gi|70727031|ref|YP_253945.1| hypothetical protein SH2030 [Staphylococcus haemolyticus JCSC1435]
 gi|68447755|dbj|BAE05339.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 275

 Score = 42.0 bits (97), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA+   G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 VATLFIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSI 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHILQGHV 223


>gi|254373818|ref|ZP_04989301.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|151571539|gb|EDN37193.1| conserved hypothetical protein [Francisella novicida GA99-3548]
          Length = 252

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 11/121 (9%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGID---DSICMHVAMGTSLGVIAPTSVM 84
           VASF+S  L G    G GL+ VP    AF  + +     +  M +A+ T  G+      +
Sbjct: 12  VASFMSTLLGG----GAGLIAVP----AFYFIIVHTYGSNFAMQIALATCCGMSIFLGSI 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  +H + G I++  LK ++  L I  ++ S++  +++   L   FAI     GI M+  
Sbjct: 64  ATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKYINTELLKMVFAILLFGSGIWMILH 123

Query: 145 D 145
           +
Sbjct: 124 N 124


>gi|226942384|ref|YP_002797457.1| hypothetical protein Avin_02210 [Azotobacter vinelandii DJ]
 gi|226717311|gb|ACO76482.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
          Length = 267

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 9/160 (5%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           L+ VP+L  A  + G D      VA+ TS+ V++  SV S   H + G ++  I++    
Sbjct: 30  LITVPLLIMALPMFGFDPEHAPLVALATSMAVVSVGSVSSVFSHNKLGNVDWSIVR---I 86

Query: 106 VLPITTV---VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW 162
           V+P + +   + SL I     + L   F IF  ++ + ML   +        D    +++
Sbjct: 87  VVPASLIGVGLGSLSIDLFSGTLLKWLFCIFLSIIAVRMLLPTKKKTANDAIDTTAPWVY 146

Query: 163 ---GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
              G + G     +G GGG+F    +   G ++ +A ATS
Sbjct: 147 RSAGGLIGIAGSLIGAGGGVFMVPFLNRIGHAMPRAVATS 186


>gi|197123917|ref|YP_002135868.1| hypothetical protein AnaeK_3526 [Anaeromyxobacter sp. K]
 gi|196173766|gb|ACG74739.1| protein of unknown function DUF81 [Anaeromyxobacter sp. K]
          Length = 255

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 21/156 (13%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +GTL  L G+GGG+++VP+L+  F L           A+  SL VI  +S  +   +   
Sbjct: 13  AGTLGALMGIGGGIIVVPILTAGFGL-------PFRHAVAVSLVVIIASSSSAAASYVDR 65

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDK----SFLNKAFAIFCLLMGILMLKRDRLY 148
              +M++      VL + TV  +++ S V        L   FA   +   ++M +R    
Sbjct: 66  KLSDMRV----GVVLELATVTGAMLGSAVAGLAPVGLLKALFAAVAVYSALVMWRRRPAG 121

Query: 149 CERKFPDNYVKYIWG------MVTGFLSGALGVGGG 178
            +    + YV   WG       V G +SG +GVGGG
Sbjct: 122 PQAAEGEPYVVRRWGTGLGASAVAGAISGLIGVGGG 157


>gi|134299433|ref|YP_001112929.1| hypothetical protein Dred_1576 [Desulfotomaculum reducens MI-1]
 gi|134052133|gb|ABO50104.1| protein of unknown function DUF81 [Desulfotomaculum reducens MI-1]
          Length = 251

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 7/124 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++++A   +G LSG+ GVGGG +MVP +     L+G       + A G SL  + P  
Sbjct: 129 ILILLLAGGFTGFLSGMMGVGGGTIMVPSM---VLLIGFTQ----YTAQGCSLLAMVPVG 181

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++    H R G ++  IL   I  + I T +   +   + +  L   FAI  +  G+  L
Sbjct: 182 IVGAYTHWRLGNVSTSILPGLIPGILIGTFLGGSLAHILSEGALRIIFAIVMIRTGVKYL 241

Query: 143 KRDR 146
           K  +
Sbjct: 242 KTPK 245


>gi|4204415|gb|AAD10707.1| putative permease [Oenococcus phage fOg44]
 gi|57281911|emb|CAD19152.1| hypothetical protein [Oenococcus phage fOg44]
          Length = 252

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 14/185 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +IV   + GT   LFG GG  + + +L+    ++G++ S     A  TSL  + P+ 
Sbjct: 3   VVFLIVIGLIVGTFVILFGGGGAAIYLGILTG---VVGLNAS----TAASTSLVTVLPSL 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++    + R GTI  ++    +       ++ SL+ S++  +       I  +L+GI ML
Sbjct: 56  ILGVWTYYRQGTIKTRLGNQMLITAIPAVIIGSLISSYIPDNLYKWIVGIILILLGINML 115

Query: 143 KRDR-------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +       +  +      +   I G++ G + G  G+ GG      +   G S   A
Sbjct: 116 FQKQKSQVDPVMSKQINRKGRFKAGICGIIGGLMVGVAGMSGGAPIIAGLFLIGLSTVNA 175

Query: 196 TATSA 200
            ATSA
Sbjct: 176 VATSA 180


>gi|332520864|ref|ZP_08397324.1| protein of unknown function DUF81 [Lacinutrix algicola 5H-3-7-4]
 gi|332043394|gb|EGI79590.1| protein of unknown function DUF81 [Lacinutrix algicola 5H-3-7-4]
          Length = 128

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 16/115 (13%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA-PTSVMSFMEHRR 91
           +G  SG+FGVGGG++MVP++  A            H A GTSL V+A P + ++   +  
Sbjct: 20  AGVFSGMFGVGGGVIMVPLMVFAL-------GYTQHQAQGTSLAVLAVPVTFLA--AYTY 70

Query: 92  HGTINMKILKDWIFVLPITTVV-----TSLMISHVDKSFLNKAFAIFCLLMGILM 141
           H T +  I   +  ++ +  V+     T + IS ++++ L K F++  +++ + M
Sbjct: 71  HTTGDNPINFKYALIIAVCFVLGGYFGTKIAIS-INETLLKKIFSVLLVIVAVKM 124


>gi|332289004|ref|YP_004419856.1| Sulfite exporter TauE/SafE [Gallibacterium anatis UMN179]
 gi|330431900|gb|AEC16959.1| Sulfite exporter TauE/SafE [Gallibacterium anatis UMN179]
          Length = 265

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)

Query: 23 ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGID--DSICMHVAMGTSL 75
          I  ++V  FLS  +S LFG+GGG++MVPVL   F  M +    +  + + MGTS+
Sbjct: 6  IITLVVCGFLSNLMSALFGIGGGVLMVPVLHTMFPEMPLQMVAATSLTIVMGTSV 60


>gi|289522500|ref|ZP_06439354.1| conserved hypothetical membrane protein, DUF81 family
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289504336|gb|EFD25500.1| conserved hypothetical membrane protein, DUF81 family
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 264

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 32/216 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI V SF++G+++GL G  G +V+VP L     ++G         A+G SL   A  S++
Sbjct: 5   LITVISFIAGSITGLIGASGVMVIVPGL----VMLGCST----FDAIGCSLFADALASLV 56

Query: 85  SFMEHRRHGTINMKILKDWIFVLP--ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               + R+G +N++  + W   L   +   + S +  H+ +  +  +F +  L+   +  
Sbjct: 57  VAWTYSRYGNLNLR--QGWPIALGSILGAQLGSFISPHLPEMGVGGSFGVLLLVSAAMFW 114

Query: 143 ----KRDRLYCERKFPDN-YVK--------------YIWGMVTGFLSGALGVGGGIFTNL 183
               K+  +  E K   N  VK               I G++ G +SG LG GGG+   L
Sbjct: 115 RKGSKKAAIKPEGKTTSNDEVKGFLKVLRDNPKTSGTILGVLVGIISGILGAGGGVMILL 174

Query: 184 LMLFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
           +++F  G  +++   TS  + A  A    L   ++G
Sbjct: 175 ILVFVMGYKVHEGVGTSTLIMAFTAASGALGHAFTG 210


>gi|315446689|ref|YP_004079568.1| permease [Mycobacterium sp. Spyr1]
 gi|315264992|gb|ADU01734.1| predicted permease [Mycobacterium sp. Spyr1]
          Length = 292

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 7/120 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II    + G ++GL G GGG ++VP L+    L+G    + M VA+GTSL VIA  S   
Sbjct: 134 IIAEGLVVGLVTGLVGAGGGFLVVPALA----LLG---GLPMPVAVGTSLIVIAMKSFAG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +     IN  +         +  ++ + + S +D   L KAF  F L M  ++L ++
Sbjct: 187 LGGYLTSVQINWSLALAVTAAAVVGALIGARLTSKIDPDALRKAFGWFVLAMSSVILAQE 246


>gi|325184964|emb|CCA19456.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 313

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 54/194 (27%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+A   +G LS L G+GGG +++PVL+K         ++   +  GTS+G I  ++ +  
Sbjct: 41  IIAGSCAGILSALTGLGGGTILIPVLAKW-------TTLSQQIVNGTSIGAITVSTAVGS 93

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             + R G  N  I     FV  +  ++ S     V  +  +K  +   L+ G++M+    
Sbjct: 94  WNYFRQGACNYPI----AFVTTLPAILCSRYGVRVAHNLSSKRLS---LVGGVIMIAASP 146

Query: 147 LYCERK------------------FPDN--YVKYIW--------------------GMVT 166
           L   ++                  FP     +K  W                    G V 
Sbjct: 147 LILLKQSGHLPKFSKITHPLDLQLFPSEPGSIKSFWANASDDLLGFLGINCKYLVAGAVA 206

Query: 167 GFLSGALGVGGGIF 180
           GF+SG  G GGGI 
Sbjct: 207 GFISGLCGTGGGIL 220


>gi|315658763|ref|ZP_07911632.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590]
 gi|315496218|gb|EFU84544.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590]
          Length = 275

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA+   G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 VATLFIGVLTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSI 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIFQGHV 223


>gi|223042876|ref|ZP_03612924.1| putative membrane protein [Staphylococcus capitis SK14]
 gi|222443730|gb|EEE49827.1| putative membrane protein [Staphylococcus capitis SK14]
          Length = 275

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA+   G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 VATLFIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSI 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIVQGHV 223


>gi|271499890|ref|YP_003332915.1| hypothetical protein Dd586_1331 [Dickeya dadantii Ech586]
 gi|270343445|gb|ACZ76210.1| protein of unknown function DUF81 [Dickeya dadantii Ech586]
          Length = 254

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 69/137 (50%), Gaps = 11/137 (8%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + +PVL   F   G++     H+A GT+L +I P  ++ F+ +R+   I+ ++       
Sbjct: 33  IAIPVLGMLF---GMNQ----HLAQGTALIMITPNVLIGFLRYRQRNKIDTRMTLMLCAF 85

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV--KY--IW 162
             ++  + + M + +    L +AFAIF L++    + +       + P + +  +Y  + 
Sbjct: 86  ATVSAYIAAHMAAAIQVDNLQQAFAIFLLVLAAYYIWQWVNSQRSRTPTSVLSARYLPVL 145

Query: 163 GMVTGFLSGALGVGGGI 179
           G+ +GF+SG   VGGG+
Sbjct: 146 GVASGFMSGIFTVGGGL 162


>gi|208780427|ref|ZP_03247768.1| hypothetical membrane protein [Francisella novicida FTG]
 gi|208743795|gb|EDZ90098.1| hypothetical membrane protein [Francisella novicida FTG]
          Length = 252

 Score = 41.6 bits (96), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 11/121 (9%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD---SICMHVAMGTSLGVIAPTSVM 84
           VASF+S  L G    G GL+ VP    AF  + +     +  M +A+ T  G+      +
Sbjct: 12  VASFMSTLLGG----GAGLIAVP----AFYFIIVHTYGPNFAMQIALATCCGMSIFLGSI 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  +H + G I++  LK ++  L I  ++ S++  +++   L   FAI     GI M+  
Sbjct: 64  ATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKYINTELLKMVFAILLFGSGIWMILH 123

Query: 145 D 145
           +
Sbjct: 124 N 124


>gi|254372344|ref|ZP_04987835.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151570073|gb|EDN35727.1| conserved hypothetical protein [Francisella novicida GA99-3549]
          Length = 252

 Score = 41.6 bits (96), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 11/121 (9%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD---SICMHVAMGTSLGVIAPTSVM 84
           VASF+S  L G    G GL+ VP    AF  + +     +  M +A+ T  G+      +
Sbjct: 12  VASFMSTLLGG----GAGLIAVP----AFYFIIVHTYGPNFAMQIALATCCGMSIFLGSI 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  +H + G I++  LK ++  L I  ++ S++  +++   L   FAI     GI M+  
Sbjct: 64  ATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKYINTELLKMVFAILLFGSGIWMILH 123

Query: 145 D 145
           +
Sbjct: 124 N 124


>gi|242373089|ref|ZP_04818663.1| hypothetical membrane Spanning protein [Staphylococcus epidermidis
           M23864:W1]
 gi|242349243|gb|EES40844.1| hypothetical membrane Spanning protein [Staphylococcus epidermidis
           M23864:W1]
          Length = 275

 Score = 41.6 bits (96), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA+   G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 VATLFIGVLTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSV 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIVQGHV 223


>gi|188994402|ref|YP_001928654.1| hypothetical protein PGN_0538 [Porphyromonas gingivalis ATCC 33277]
 gi|188594082|dbj|BAG33057.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 268

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 19/128 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            LI++   + GTL+GL G GG  +++P    A   +G    + M  A+GTSL +I+  S+
Sbjct: 150 ALILLEGIVVGTLTGLVGAGGSFLIIP----ALVFLG---GLPMKQAIGTSLVIISAKSL 202

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITT-VVTSLMI-----SHVDKSFLNKAFAIFCLLM 137
           + F+       +      DW  +L +T   +  + I      ++D   L  AF  F  +M
Sbjct: 203 LGFLGENNPAGL------DWGLLLSVTAFAIIGIFIGMKLSQYIDGDKLKPAFGWFVFVM 256

Query: 138 GILMLKRD 145
           G+ ++ ++
Sbjct: 257 GLYIILKE 264


>gi|119356263|ref|YP_910907.1| hypothetical protein Cpha266_0425 [Chlorobium phaeobacteroides DSM
           266]
 gi|119353612|gb|ABL64483.1| conserved hypothetical protein [Chlorobium phaeobacteroides DSM
           266]
          Length = 121

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 11/105 (10%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPTSVMSFMEHRRH 92
           G L+G+FGVGGG+++VPVL     L+G+      H A  TSL  ++ P  ++  ME+ R 
Sbjct: 14  GILAGMFGVGGGIIIVPVL---VLLVGMTQ----HSASATSLVALLLPVGILGVMEYYRS 66

Query: 93  GTINMKILKDWIFV---LPITTVVTSLMISHVDKSFLNKAFAIFC 134
           G I  + L   + +   L I     + +   +    L KAFA+F 
Sbjct: 67  GRITTEHLWFGLIIALGLFIGAYFGAKIAISLSSDTLRKAFAVFT 111


>gi|187931262|ref|YP_001891246.1| domain of unknown function, putative [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187712171|gb|ACD30468.1| domain of unknown function, putative [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 252

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 15/128 (11%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD---SICMHVAMGTSLGVIAPTSVM 84
           VASF+S  L G    G GL+ VP    AF  + +     +  M +A+ T  G+      +
Sbjct: 12  VASFMSTLLGG----GAGLIAVP----AFYFIIVHTYGPNFAMQIALATCCGMSIFLGSI 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  +H + G I++  LK ++  L I  ++ S++  +++   L   FAI     GI M+  
Sbjct: 64  ATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKYINIELLKMVFAILLFGSGIWMI-- 121

Query: 145 DRLYCERK 152
             LY + K
Sbjct: 122 --LYNDNK 127


>gi|314933135|ref|ZP_07840500.1| putative membrane protein [Staphylococcus caprae C87]
 gi|313653285|gb|EFS17042.1| putative membrane protein [Staphylococcus caprae C87]
          Length = 275

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA+   G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 VATLFIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSV 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIVQGHV 223


>gi|171915322|ref|ZP_02930792.1| hypothetical protein VspiD_29145 [Verrucomicrobium spinosum DSM
           4136]
          Length = 264

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 26/125 (20%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G LSGLFGVGGG ++VPVL            + +H A+ TSL VI   SV   + H  H
Sbjct: 154 AGLLSGLFGVGGGFIIVPVLL-------FVTGMSIHRAVATSLLVIFLISVSGVIAHMLH 206

Query: 93  GTINMKILKDWIFVLPIT----------TVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           G          +F +P++           ++ S + S V  + L + FA    L+ + ML
Sbjct: 207 GQ---------LFPMPLSLLFIGGGFAGMLLGSTLRSRVHGNTLQRLFAAAMWLVALWML 257

Query: 143 KRDRL 147
            R+ L
Sbjct: 258 VRNLL 262



 Score = 40.0 bits (92), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 18/152 (11%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP--ITTVVTSLMISHV 121
           S+ +  AMG SL  +  T+    +   RHG +        IF +   +T  + + +  H+
Sbjct: 39  SVPVGTAMGLSLATVGLTAGFGALLRLRHGEVEWP--AGLIFAVAGMLTAPLGTTLGRHL 96

Query: 122 DKSFLNKAFAIFCLLMGILMLK----RDRLYCERKF--------PDNYVKY-IWGMVTGF 168
             + L   FA+    +G  M +     D     R          P+ Y++    G   G 
Sbjct: 97  PAALLLSTFALLMAYIGARMWRGRGAEDDAPPSRCVARGPGAFGPECYLRLGSGGAAAGL 156

Query: 169 LSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
           LSG  GVGGG I   +L+   G SI++A ATS
Sbjct: 157 LSGLFGVGGGFIIVPVLLFVTGMSIHRAVATS 188


>gi|152989835|ref|YP_001355557.1| hypothetical protein NIS_0083 [Nitratiruptor sp. SB155-2]
 gi|151421696|dbj|BAF69200.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 250

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 15/184 (8%)

Query: 31  FLSGTLSGLF---GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           FL+  LS LF   GVG  + +VP+    F +MG+  ++   + +  +       SVM+F 
Sbjct: 13  FLTLVLSTLFAMGGVGSAIALVPL----FSMMGMPINLAKAIGLFINSASTITASVMNFF 68

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
                G +++K     I  + + T + +    +V K  +      F L+   L+L  ++ 
Sbjct: 69  R----GVLDIKFALPLIISIMVATPIGAWSSQYVQKEIIEWMLVAFLLISSTLLLFSNK- 123

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
             +  +   +V Y+ G   G +SG +GVGGG     L++  G   + A   +  +S +I 
Sbjct: 124 KPKVVYDKVWVLYVIGGSVGIVSGMIGVGGGSLIMPLLILLG---FDAKKAAYAISFVIP 180

Query: 208 FPAL 211
           F  L
Sbjct: 181 FSTL 184


>gi|254370446|ref|ZP_04986451.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|151568689|gb|EDN34343.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
          Length = 237

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 11/120 (9%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDD---SICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +S L G G GL+ VP    AF  + +     +  M +A+ T  G+      ++  +H + 
Sbjct: 1   MSTLLGGGAGLIAVP----AFYFIIVHTYGPNFAMQIALATCCGMSIFLGSIATFKHYKK 56

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           G I++  LK ++  L I  ++ S+++ +++   L   FAI     GI M+    LY + K
Sbjct: 57  GNIDLGELKYYLLYLSIGALIGSIIVKYINTELLKMVFAILLFGSGIWMI----LYNDNK 112


>gi|296132842|ref|YP_003640089.1| protein of unknown function DUF81 [Thermincola sp. JR]
 gi|296031420|gb|ADG82188.1| protein of unknown function DUF81 [Thermincola potens JR]
          Length = 118

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 9/87 (10%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV----TSLMISHVD 122
            H+A G SL    PTS+++ + H RHG ++ ++     F L +T+V+     S +  ++ 
Sbjct: 36  QHMAQGISLASFLPTSLVAVITHYRHGNVDTRL----AFSLAVTSVIGAVGGSYLAHYIS 91

Query: 123 KSFLNKAFAIFCLLMGIL-MLKRDRLY 148
              L + F  F ++MG+  +  R +++
Sbjct: 92  AQHLRQVFGFFLIIMGLYEIFNRKKVH 118


>gi|224476019|ref|YP_002633625.1| hypothetical protein Sca_0526 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222420626|emb|CAL27440.1| putative membrane protein [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 274

 Score = 41.2 bits (95), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 7/67 (10%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A+F  G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS + 
Sbjct: 163 ATFGIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSIG 215

Query: 89  HRRHGTI 95
           H   G +
Sbjct: 216 HIFQGHV 222


>gi|159041329|ref|YP_001540581.1| hypothetical protein Cmaq_0755 [Caldivirga maquilingensis IC-167]
 gi|157920164|gb|ABW01591.1| protein of unknown function DUF81 [Caldivirga maquilingensis
           IC-167]
          Length = 276

 Score = 41.2 bits (95), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 7/116 (6%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A F  G +SG FG+GGG ++VP L            +C+  A+GTSL  +    V S  E
Sbjct: 164 AGFAVGLVSGYFGIGGGFLIVPALM-------FSTGLCITRAIGTSLISVGTFGVASGAE 216

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  +G + + I   ++          + +     K+ L  A+ +  +L+GI ML R
Sbjct: 217 YWAYGEVLVLIAALYVLGGIAGGYAGTSIAVKAPKNTLRVAYGVIIVLVGIYMLYR 272


>gi|315639084|ref|ZP_07894252.1| conserved hypothetical integral membrane protein [Campylobacter
           upsaliensis JV21]
 gi|315480860|gb|EFU71496.1| conserved hypothetical integral membrane protein [Campylobacter
           upsaliensis JV21]
          Length = 263

 Score = 41.2 bits (95), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 24/158 (15%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM-SFMEHR 90
           +SG  SGLFG+GGG+++VP +      +GI      H A+  S+  +   ++  S++ H+
Sbjct: 14  ISGIASGLFGIGGGMIIVPTM----LFLGISS----HQAVAISVVQMIFAAIFGSYINHK 65

Query: 91  RHGTINMKILKDWIFV-----LPIT---TVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +    N+   KD I++     L  +   T+V+ L    +   FL  +FA F  L     +
Sbjct: 66  KK---NLN-FKDGIYIGLGGLLGASFSGTLVSLLSDIALTAIFLCVSFAFF--LKYAFGV 119

Query: 143 KRDRLYCER-KFPDNYVKYIWGMVTGFLSGALGVGGGI 179
           K    + +R KF  N + +  G+ TG  + +LG+GGG+
Sbjct: 120 KNTTNHTQRSKFAKNAILFGAGVFTGVFAISLGIGGGL 157


>gi|296330693|ref|ZP_06873170.1| putative integral inner membrane protein [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305673949|ref|YP_003865621.1| putative integral inner membrane protein [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296152157|gb|EFG93029.1| putative integral inner membrane protein [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412193|gb|ADM37312.1| putative integral inner membrane protein [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 254

 Score = 41.2 bits (95), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 25/178 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II+     G L GL GVGG  ++ P+L     ++GI+ SI    A+GT L   + T +  
Sbjct: 5   IILMGLFVGALVGLTGVGGAALLTPLLI----VLGINPSI----AVGTDLVYNSITKLFG 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H R  TIN K++K ++ +  I +   ++ I H+  +F      I    +G ++    
Sbjct: 57  VASHWRQKTINFKLVK-YLAIGSIPSASLAIGILHLFPAFHQHQEEIIKHALGYVLTLVA 115

Query: 146 -----RLYCERKFPDNY-----------VKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
                RL+ +RK   N            +  + G+V GF+ G   +G G    + M++
Sbjct: 116 ISIIVRLFLDRKLRPNRWQLMPLENKRALTILIGIVFGFIVGLTSIGSGSLFAIAMIY 173


>gi|329765600|ref|ZP_08257176.1| Putative permease [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138038|gb|EGG42298.1| Putative permease [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 264

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 26/157 (16%)

Query: 58  LMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPIT--TVVTS 115
           ++G+ D+   HVA+GTS   I   +V +    R+  T+++K  K   F LP    T++ S
Sbjct: 45  VVGVKDT---HVAIGTSALAIGIIAVFNIFYRRKTSTLHIK--KGLTFALPGIGGTLLGS 99

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE------------RKFPDNYVKYIWG 163
            +        L   FA+F +++GI+M+K    + E            +  P      + G
Sbjct: 100 QLGLWTPPENLLILFAVFMVVIGIIMIKYKITHIEITSEKHGLISLKKNLP------LSG 153

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGA-SIYKATATS 199
              G LSG  G+GGG      M++ G  +I +A  TS
Sbjct: 154 FSVGILSGYFGIGGGFLIVPTMMYSGGLNILQAIGTS 190


>gi|307594454|ref|YP_003900771.1| hypothetical protein Vdis_0313 [Vulcanisaeta distributa DSM 14429]
 gi|307549655|gb|ADN49720.1| protein of unknown function DUF81 [Vulcanisaeta distributa DSM
           14429]
          Length = 279

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 7/125 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I  + V  F+ G +SG FG+GGG ++VP L            +C+  A+GTSL  + 
Sbjct: 156 ISTILKVAVFGFIVGLVSGYFGIGGGFLIVPSLM-------FSAGLCITRAIGTSLISVG 208

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              V S  E+  +G + + I   ++          + +     K  L  A+ I  +L+GI
Sbjct: 209 TFGVASGAEYWFYGDVLILIALLYVAGGIAGGYAGTSIAVKAPKRTLRIAYGIIIVLVGI 268

Query: 140 LMLKR 144
            ML R
Sbjct: 269 YMLMR 273


>gi|289551261|ref|YP_003472165.1| hypothetical protein SLGD_01950 [Staphylococcus lugdunensis
           HKU09-01]
 gi|289180793|gb|ADC88038.1| hypothetical protein SLGD_01950 [Staphylococcus lugdunensis
           HKU09-01]
          Length = 275

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA+   G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 VATLFIGVLTGLFGIGGGALMTPLMLIIFRF-------PPHVAVGTSMMMIFFSSVMSSI 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIFQGHV 223


>gi|254410195|ref|ZP_05023975.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC
           7420]
 gi|196183231|gb|EDX78215.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC
           7420]
          Length = 267

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 83/199 (41%), Gaps = 25/199 (12%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A   +G L+G  G+GGG V+VP+L      +G D       A+ TS   I  T++   ++
Sbjct: 12  AGLFAGILAGFLGIGGGTVLVPLLVT----LGYD----YQQAVATSTLSIVITAISGTVQ 63

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
           + R G I+ K +    F   IT  + + +       +L  AF +  L+   L+  R RL 
Sbjct: 64  NWRLGNIDFKRIIAIGFPAIITAPIGAYLTELFADYWLKAAFGLLLLINIYLVRLRKRLK 123

Query: 149 CE-----------RKFPDNYVKYIWGMV-TGFLSGALG-----VGGGIFTNLLMLFYGAS 191
                        R+ P +  +     + TG  +G L       GG I   L +L  G S
Sbjct: 124 AREKQDSLETVTPRQIPHSKSQAALARISTGSTAGLLAGVFGVGGGVILVPLQILLLGES 183

Query: 192 IYKATATSAGVSALIAFPA 210
           I  A  TS GV  + A  A
Sbjct: 184 IKTAIQTSLGVIVITAISA 202


>gi|16078305|ref|NP_389122.1| integral inner membrane protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221309089|ref|ZP_03590936.1| hypothetical protein Bsubs1_06851 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313416|ref|ZP_03595221.1| hypothetical protein BsubsN3_06787 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318339|ref|ZP_03599633.1| hypothetical protein BsubsJ_06726 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221322612|ref|ZP_03603906.1| hypothetical protein BsubsS_06832 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81342352|sp|O34578|YJNA_BACSU RecName: Full=UPF0721 transmembrane protein yjnA
 gi|2612912|gb|AAC46336.1| unknown [Bacillus subtilis subsp. subtilis str. 168]
 gi|2633594|emb|CAB13097.1| putative integral inner membrane protein [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 254

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 25/178 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II+     G L GL GVGG  ++ P+L     ++GI+ SI    A+GT L   + T +  
Sbjct: 5   IILMGLFVGALVGLTGVGGAALLTPLLI----VLGINPSI----AVGTDLVYNSITKLFG 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H R  TIN K++K ++ +  I +   ++ I H+  +F      I    +G ++    
Sbjct: 57  VASHWRQKTINFKLVK-YLAIGSIPSASLAIGILHLFPAFHQHQEEIIKHALGYVLTLVA 115

Query: 146 -----RLYCERKFPDNY-----------VKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
                RL+ +RK   N            +  + G+V GF+ G   +G G    + M++
Sbjct: 116 ISIIVRLFLDRKLRPNRWQLMPLENKRALTILIGVVFGFIVGLTSIGSGSLFAIAMIY 173


>gi|321314982|ref|YP_004207269.1| putative integral inner membrane protein [Bacillus subtilis BSn5]
 gi|291483754|dbj|BAI84829.1| hypothetical protein BSNT_02100 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320021256|gb|ADV96242.1| putative integral inner membrane protein [Bacillus subtilis BSn5]
          Length = 254

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 25/178 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II+     G L GL GVGG  ++ P+L     ++GI+ SI    A+GT L   + T +  
Sbjct: 5   IILMGLFVGALVGLTGVGGAALLTPLLI----VLGINPSI----AVGTDLVYNSITKLFG 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H R  TIN K++K ++ +  I +   ++ I H+  +F      I    +G ++    
Sbjct: 57  VASHWRQKTINFKLVK-YLAIGSIPSASLAIGILHLFPAFHQHQEEIIKHALGYVLTLVA 115

Query: 146 -----RLYCERKFPDNY-----------VKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
                RL+ +RK   N            +  + G+V GF+ G   +G G    + M++
Sbjct: 116 ISIIVRLFLDRKLRPNRWQLMPLENKRALTILIGVVFGFIVGLTSIGSGSLFAIAMIY 173


>gi|86608140|ref|YP_476902.1| hypothetical protein CYB_0652 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556682|gb|ABD01639.1| putative membrane protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 285

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 15/73 (20%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G L+GLFG+GGG+++VP      Q++ + ++I   VA+ TSLG I  T+V +   H   
Sbjct: 157 AGLLAGLFGIGGGVILVP-----MQILLLKETI--KVAIQTSLGAIVITAVAATASHAG- 208

Query: 93  GTINMKILKDWIF 105
                  L DWI+
Sbjct: 209 -------LSDWIW 214


>gi|57242515|ref|ZP_00370453.1| conserved hypothetical integral membrane protein [Campylobacter
           upsaliensis RM3195]
 gi|57016800|gb|EAL53583.1| conserved hypothetical integral membrane protein [Campylobacter
           upsaliensis RM3195]
          Length = 258

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 24/158 (15%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM-SFMEHR 90
           +SG  SGLFG+GGG+++VP +      +GI      H A+  S+  +   ++  S++ H+
Sbjct: 9   ISGIASGLFGIGGGMIIVPTM----LFLGISS----HQAVAISVVQMIFAAIFGSYINHK 60

Query: 91  RHGTINMKILKDWIFV-------LPITTVVTSLMISHVDKS-FLNKAFAIFCLLMGILML 142
           +    N+   KD I++          +  + SL+   V  + FL  +FA F  L     +
Sbjct: 61  KK---NLN-FKDGIYIGLGGLLGASFSGTLVSLLSDIVLTAIFLCVSFAFF--LKYAFGV 114

Query: 143 KRDRLYCER-KFPDNYVKYIWGMVTGFLSGALGVGGGI 179
           K    + +R KF  N + +  G+ TG  + +LG+GGG+
Sbjct: 115 KNTTNHTQRSKFVKNAILFGAGVFTGVFAISLGIGGGL 152


>gi|322419874|ref|YP_004199097.1| hypothetical protein GM18_2363 [Geobacter sp. M18]
 gi|320126261|gb|ADW13821.1| protein of unknown function DUF81 [Geobacter sp. M18]
          Length = 253

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 21/177 (11%)

Query: 31  FLSGTLSGLFGV---GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           FL+G ++GL      GGGL+ +PV      L+GI   +    A+GT+  + A     S M
Sbjct: 13  FLTGGVAGLIDAIAGGGGLITIPV------LLGI--GLPPQTALGTNK-LQATFGSCSAM 63

Query: 88  EH-RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILM 141
            H  + GT+N++  +  +    +  V+ S  +  +D  FL K       AI C    I  
Sbjct: 64  THFVKAGTVNLRDARPGVLWTAVGAVLGSYTVQQMDPGFLKKCIPFLLLAILCYT--IFT 121

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
            K        + P      + G+  GF  G LG G G F  + +ML  G  + K T 
Sbjct: 122 PKLGAQEVHPRLPRRTFYLLAGLGLGFYDGFLGPGTGSFWVIAIMLGLGFDMRKGTG 178


>gi|224419033|ref|ZP_03657039.1| integral membrane protein- permeases [Helicobacter canadensis MIT
           98-5491]
 gi|253827976|ref|ZP_04870861.1| integral membrane protein [Helicobacter canadensis MIT 98-5491]
 gi|253511382|gb|EES90041.1| integral membrane protein [Helicobacter canadensis MIT 98-5491]
          Length = 258

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 86/165 (52%), Gaps = 20/165 (12%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM-SFMEHR 90
           L+G L+GLFG+GGG ++VP++     L+G D    + +A+G S+  +  +SV  S++ ++
Sbjct: 20  LAGILAGLFGIGGGAIIVPMM----ILLGND----IKIAIGISIMQMIFSSVYGSYVNYK 71

Query: 91  RHGTINMKILKDWIFVLP---ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
           +    N+   +D ++V     I    + +++S +  S L   F++F +   +     +  
Sbjct: 72  KK---NLD-FRDGVYVGIGGLIGASFSGVVVSSMPSSILEIIFSLFIVYSIMRFFFTNAY 127

Query: 148 YCERKFPDNYVKYIW----GMVTGFLSGALGVGGGIFTNLLMLFY 188
             ERK  + +   ++    G V G  + +LG+GGG+    L+ +Y
Sbjct: 128 GGERKVGEGWKSILFLIGCGCVVGVFAISLGIGGGMMLAPLLAYY 172


>gi|227829102|ref|YP_002830881.1| protein of unknown function DUF81 [Sulfolobus islandicus L.S.2.15]
 gi|229577902|ref|YP_002836300.1| protein of unknown function DUF81 [Sulfolobus islandicus Y.G.57.14]
 gi|229580803|ref|YP_002839202.1| protein of unknown function DUF81 [Sulfolobus islandicus Y.N.15.51]
 gi|284996488|ref|YP_003418255.1| protein of unknown function DUF81 [Sulfolobus islandicus L.D.8.5]
 gi|227455549|gb|ACP34236.1| protein of unknown function DUF81 [Sulfolobus islandicus L.S.2.15]
 gi|228008616|gb|ACP44378.1| protein of unknown function DUF81 [Sulfolobus islandicus Y.G.57.14]
 gi|228011519|gb|ACP47280.1| protein of unknown function DUF81 [Sulfolobus islandicus Y.N.15.51]
 gi|284444383|gb|ADB85885.1| protein of unknown function DUF81 [Sulfolobus islandicus L.D.8.5]
          Length = 293

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 10/145 (6%)

Query: 3   DLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGID 62
            +L N S  + L +   +D +   + A FL G  SG FG+GGG ++VP L  +    G+D
Sbjct: 150 SILSNNSHKLTLRERIKIDKV---LPAGFLVGFASGYFGIGGGFLVVPGLLFS---TGLD 203

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
               M  A+GTSL  +    V + + +  +G +++ I   ++          S + S + 
Sbjct: 204 ----MLRAVGTSLIAVGTFGVAAAITYAVYGYVDIVISLLYLVGGVAGGYAGSAIASRMP 259

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRL 147
           +  L K FAI  +L+ I  +  +R+
Sbjct: 260 RQTLRKLFAIIIILVAIYTMYVNRV 284


>gi|226943649|ref|YP_002798722.1| hypothetical protein Avin_15320 [Azotobacter vinelandii DJ]
 gi|226718576|gb|ACO77747.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
          Length = 249

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 30/193 (15%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           +PVL   F   G+D     H+A G++L ++ P  +++   + +   I+ +       V+ 
Sbjct: 32  IPVLGLLF---GLDQ----HLAQGSALVMVVPNVLLALRRYHQRNRIDPRH----ALVMA 80

Query: 109 ITTVVTSLMISH----VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW-- 162
            + + T+ + +     +D   + +AF  F  L+ +      RL+  R  P   +   W  
Sbjct: 81  GSGLCTAWLGAQAANLLDAGHMRQAFCGF--LLALATWSGLRLFL-RPAPGGELCRPWPW 137

Query: 163 ----GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
               GM +G L G  GVGG  + T LL+  +GAS       + G+S  +A P+ LV + +
Sbjct: 138 LVPLGMGSGTLGGLFGVGGALVATPLLIALFGAS----QVVAQGLSLALAVPSTLVSLAT 193

Query: 218 GWGLNGLPPWSLG 230
            + L+G   W LG
Sbjct: 194 -YALHGRVDWMLG 205



 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 7/64 (10%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           SGTL GLFGVGG LV  P+L   F    +       VA G SL +  P++++S   +  H
Sbjct: 145 SGTLGGLFGVGGALVATPLLIALFGASQV-------VAQGLSLALAVPSTLVSLATYALH 197

Query: 93  GTIN 96
           G ++
Sbjct: 198 GRVD 201


>gi|323473570|gb|ADX84176.1| conserved hypothetical protein [Sulfolobus islandicus REY15A]
 gi|323476217|gb|ADX81455.1| conserved hypothetical protein [Sulfolobus islandicus HVE10/4]
          Length = 293

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 10/145 (6%)

Query: 3   DLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGID 62
            +L N S  + L +   +D +   + A FL G  SG FG+GGG ++VP L  +    G+D
Sbjct: 150 SILSNNSHKLTLRERIKIDKV---LPAGFLVGFASGYFGIGGGFLVVPGLLFS---TGLD 203

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
               M  A+GTSL  +    V + + +  +G +++ I   ++          S + S + 
Sbjct: 204 ----MLRAVGTSLIAVGTFGVAAAITYAVYGYVDIVISLLYLVGGVAGGYAGSAIASRMP 259

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRL 147
           +  L K FAI  +L+ I  +  +R+
Sbjct: 260 RQTLRKLFAIIIILVAIYTMYVNRV 284


>gi|313142542|ref|ZP_07804735.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313131573|gb|EFR49190.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
          Length = 242

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 86/165 (52%), Gaps = 20/165 (12%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM-SFMEHR 90
           L+G L+GLFG+GGG ++VP++     L+G D    + +A+G S+  +  +SV  S++ ++
Sbjct: 4   LAGILAGLFGIGGGAIIVPMM----ILLGND----IKIAIGISIMQMIFSSVYGSYVNYK 55

Query: 91  RHGTINMKILKDWIFVLP---ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
           +    N+   +D ++V     I    + +++S +  S L   F++F +   +     +  
Sbjct: 56  KK---NLD-FRDGVYVGIGGLIGASFSGVVVSSMPSSILEIIFSLFIVYSIMRFFFTNAY 111

Query: 148 YCERKFPDNYVKYIW----GMVTGFLSGALGVGGGIFTNLLMLFY 188
             ERK  + +   ++    G V G  + +LG+GGG+    L+ +Y
Sbjct: 112 GGERKVGEGWKSILFLIGCGCVVGVFAISLGIGGGMMLAPLLAYY 156


>gi|149279667|ref|ZP_01885796.1| hypothetical protein PBAL39_08440 [Pedobacter sp. BAL39]
 gi|149229703|gb|EDM35093.1| hypothetical protein PBAL39_08440 [Pedobacter sp. BAL39]
          Length = 117

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 47/78 (60%), Gaps = 7/78 (8%)

Query: 22 YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
          +  +++  +FL+G +  L G+GGG+V++P+L+ A   +G+D    +H A+G S+  +  T
Sbjct: 15 FTVIVLAGAFLAGLVGSLTGLGGGVVIIPLLTLA---LGVD----IHYAIGASIVSVIAT 67

Query: 82 SVMSFMEHRRHGTINMKI 99
          S  S   + + G  N++I
Sbjct: 68 SSGSAAAYVKEGITNIRI 85


>gi|283834923|ref|ZP_06354664.1| conserved hypothetical protein [Citrobacter youngae ATCC 29220]
 gi|291069189|gb|EFE07298.1| conserved hypothetical protein [Citrobacter youngae ATCC 29220]
          Length = 266

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 61/268 (22%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-T 94
           LS LFGVGG +++VPVL   F          + V   TSL V+  +++++     R G  
Sbjct: 19  LSALFGVGGSILLVPVLHLLF------PQCAVQVLAATSLTVVMLSALINVCAFWRQGIR 72

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFL--NKAFAI-FCLLMGILMLK---RDRLY 148
           +N ++L  W      +  + + M + V  SFL  +K   I F L++  L L+     +  
Sbjct: 73  LNSRLLVLW------SLGMATGMQAGVYASFLLSDKMLLILFALVLVGLALRCGFSHQTT 126

Query: 149 CERKFPDNYVKYIWGMVT----GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            E   PDN  +   GM+     G ++G  G+GGG     LM                 S 
Sbjct: 127 SENVQPDNRTRSA-GMLLCTAGGAVAGLTGLGGGSVLAPLM-----------------SQ 168

Query: 205 LIAFPALLVRIYSGWGL-------------------NGLPP-WSLGFVNIGAVLIILPIS 244
           L   P   + +Y  W +                     LPP    G+VN+  V +I   +
Sbjct: 169 LSGIPRQHIAVYCNWMMLFGSAGTVVSYLYRTAPDTGALPPAMQFGYVNMAIVAVIFLCT 228

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMF 272
           +   P++ +L  ++ + +L   FS ++ 
Sbjct: 229 LAFQPISMRLRTLLPECWLQRVFSGVLL 256


>gi|73538931|ref|YP_299298.1| hypothetical protein Reut_B5106 [Ralstonia eutropha JMP134]
 gi|72122268|gb|AAZ64454.1| Protein of unknown function DUF81 [Ralstonia eutropha JMP134]
          Length = 255

 Score = 40.8 bits (94), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 14/137 (10%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           +P L   F   G+DD     +A GT+L +IAP  ++ F ++R+   I +++         
Sbjct: 35  IPALGLLF---GMDDQ---QLAQGTALVMIAPNVLIGFWQYRKRADIALRMALMLGLSAV 88

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY--IW---- 162
           + T +++ + + +D   L + FA F + + +  L   RL   R     + +    W    
Sbjct: 89  LATYLSARLATSMDAQLLRRIFAGFMIGLALYFLW--RLLPGRAITAQHARVSPRWIPLV 146

Query: 163 GMVTGFLSGALGVGGGI 179
           G+V G  SG   VGGG+
Sbjct: 147 GVVGGAFSGFFSVGGGV 163


>gi|298209087|ref|YP_003717266.1| hypothetical protein CA2559_12623 [Croceibacter atlanticus
           HTCC2559]
 gi|83849014|gb|EAP86883.1| membrane protein, putative [Croceibacter atlanticus HTCC2559]
          Length = 267

 Score = 40.8 bits (94), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 19/130 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI++   + G L+G+ G GGG +++P L    +L        M  A+ TSL +IA  S++
Sbjct: 150 LILIEGAVVGVLTGIVGAGGGFLIIPALVLFAKL-------PMKKAVATSLLIIAIKSLI 202

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTV-VTSLMI-----SHVDKSFLNKAFAIFCLLMG 138
            F+   ++  I      +W F++  +++ V  + I     + +D   L K F  F L+MG
Sbjct: 203 GFIGDIQNLDI------EWSFLIIFSSLSVAGIFIGIWLNNFIDGKKLKKGFGWFVLVMG 256

Query: 139 ILMLKRDRLY 148
           I ++ ++ ++
Sbjct: 257 IYIILKESIF 266


>gi|325964992|ref|YP_004242898.1| permease [Arthrobacter phenanthrenivorans Sphe3]
 gi|323471079|gb|ADX74764.1| putative permease [Arthrobacter phenanthrenivorans Sphe3]
          Length = 299

 Score = 40.8 bits (94), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 19/118 (16%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G ++GL G GGG ++VP L+    L+G    + M VA+GTSL VIA  S      +    
Sbjct: 148 GLVTGLVGAGGGFLVVPALA----LLG---GLPMSVAVGTSLVVIAMKSFAGLAGYLT-- 198

Query: 94  TINMKILKDWIFVLPIT--TVVTSL----MISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           T+ +    DW   L +T   VV SL    +   + ++ L KAF  F L MG  +L + 
Sbjct: 199 TVQL----DWGVTLGVTAAAVVGSLIGAKLAGRIPEAVLRKAFGWFVLAMGTFVLVQQ 252


>gi|229071178|ref|ZP_04204403.1| hypothetical protein bcere0025_33520 [Bacillus cereus F65185]
 gi|228711919|gb|EEL63869.1| hypothetical protein bcere0025_33520 [Bacillus cereus F65185]
          Length = 251

 Score = 40.8 bits (94), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV----TSLMISH 120
           I +HVA+ TSL  +A T++   + H R G +   I         I + +     SL+ +H
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVVSHYREGNVAFIIGGIVGGFGAIGSYIGSKFGSLIPAH 94

Query: 121 VDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKFPDNY-VKYI-WGMVTGFLSGAL 173
           +   F        AIF  +  I+   +++  LY  ++F  NY +K I  G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKEFSMNYFLKCICLGLVTGMMAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+    +I +    S G + L+  P     I  G G        LG+ 
Sbjct: 155 GIGSAPFIQLGLMVLLRLTIQQ----SVGTTMLVILP-----IAIGGG--------LGYS 197

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           + G +  IL + +LI    T L   IG K+      + + FSMIM
Sbjct: 198 SEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRMLLRFSMIM 239


>gi|320450895|ref|YP_004202991.1| hypothetical protein TSC_c18280 [Thermus scotoductus SA-01]
 gi|320151064|gb|ADW22442.1| putative domain of unknown function [Thermus scotoductus SA-01]
          Length = 248

 Score = 40.8 bits (94), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 7/60 (11%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+ GVGGG +MVP +     ++G+D     H A GTSL  + P S++    H R G ++
Sbjct: 143 SGMMGVGGGTIMVPAM---VLVLGMDQ----HTAQGTSLLAMVPASLVGAYTHHRLGNVD 195


>gi|299531782|ref|ZP_07045184.1| putative permease [Comamonas testosteroni S44]
 gi|298720223|gb|EFI61178.1| putative permease [Comamonas testosteroni S44]
          Length = 302

 Score = 40.8 bits (94), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 25/191 (13%)

Query: 66  CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI------TTVVTSLMIS 119
            M +A+ TS  V+   ++++   H+R GT+      DW  V P+        V+ +L  +
Sbjct: 82  AMQIAVATSTCVMVFGALLATWRHQRAGTV------DWTNVRPLLGPIGAGAVLGALAAT 135

Query: 120 HVDKSFLNKAFAIFCLLMGIL-------MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGA 172
            V   +L  AFA + L++ IL        L +      R  P      + G+V G+++  
Sbjct: 136 VVQSEWLRWAFAAY-LVLTILDCWLRPGFLAQPVAKQHRHGP--LANALSGLVIGWVAAL 192

Query: 173 LGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP--PWSLG 230
           LGVGG + T  LM   G  + +ATA +  +S  +A       I      + LP   W LG
Sbjct: 193 LGVGGSVMTVPLMRRRGIEMTRATAMANPLSLPVALAGTGTYIVLS-TQSPLPLGEWHLG 251

Query: 231 FVNIGAVLIIL 241
           +++I A  +++
Sbjct: 252 YIDIRAAAVLV 262


>gi|222150632|ref|YP_002559785.1| hypothetical protein MCCL_0382 [Macrococcus caseolyticus JCSC5402]
 gi|222119754|dbj|BAH17089.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 253

 Score = 40.8 bits (94), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 3/165 (1%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
           +SGL G+GG +V+ P+L     + G    I   +A G +   +  +++   M  R +  +
Sbjct: 19  ISGLVGIGGAIVIYPMLLFIPPIFGYK--ITPELASGLTAAQVFFSTMSGSMSQRHNPDV 76

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD 155
           N KI+    F + I +++ +   S  D   +N  +    ++   LM  + +   E    +
Sbjct: 77  NKKIIVPMGFGILIGSLMGAYSTSIFDGLLINTVYTFLAIVAVFLMFVKVKTENECTHFN 136

Query: 156 NYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
               +I  +V G LSG +G GG  I   +L+  + A      A+S
Sbjct: 137 KISLFITALVIGILSGIVGAGGAFIIVPVLLAIFKAPFRSVVASS 181


>gi|229012853|ref|ZP_04170020.1| hypothetical protein bmyco0001_32920 [Bacillus mycoides DSM 2048]
 gi|228748397|gb|EEL98255.1| hypothetical protein bmyco0001_32920 [Bacillus mycoides DSM 2048]
          Length = 251

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV----TSLMISH 120
           I +HVA+ TSL  +A T++   + H R G + + I         I + +     SL+ +H
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVVSHYREGNVVLVIGGVVGGFGAIGSFIGSKFGSLIPAH 94

Query: 121 VDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKF-PDNYVKYIW-GMVTGFLSGAL 173
           +   F        AIF  +  I+  KR +  L   ++   DN +K I+ G+VTG L+GA 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIRLIMFQKRSQSSLKGHKELSKDNVIKCIFLGLVTGILAGAF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I +    S G + L+  P   + I  G+G +     S G++
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIRQ----SVGTTMLVILP---IAIGGGFGYS-----SEGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           +      +L + +LI    T L   IG K+      + + FSMIM
Sbjct: 203 D-----YVLLVQVLI---GTMLGAYIGAKFTNYAPRMLLRFSMIM 239


>gi|220918686|ref|YP_002493990.1| protein of unknown function DUF81 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956540|gb|ACL66924.1| protein of unknown function DUF81 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 255

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 21/156 (13%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +GTL  L G+GGG+++VP+L+  F L           A+  SL VI  +S  +   +   
Sbjct: 13  AGTLGALMGIGGGIIVVPILTAGFGL-------PFRHAVAVSLVVIIASSSSAAASYVDR 65

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDK----SFLNKAFAIFCLLMGILMLKRDRLY 148
              +M++      VL + TV  +++ S V        L   FA   +   ++M +R    
Sbjct: 66  KLSDMRV----GVVLELATVAGAMLGSAVAGLAPVGLLKALFAAVAVYSALVMWRRRPAG 121

Query: 149 CERKFPDNYVKYIWG------MVTGFLSGALGVGGG 178
                 + YV   WG       V G +SG +GVGGG
Sbjct: 122 PPAAEGEPYVVRRWGTGLGASAVAGAISGLIGVGGG 157


>gi|30019601|ref|NP_831232.1| hypothetical protein BC1452 [Bacillus cereus ATCC 14579]
 gi|29895145|gb|AAP08433.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579]
          Length = 269

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 39/208 (18%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +++YI L+ +   ++GT+  L G+GGG+++VP+      L+G+  S+   +A+GTS+  
Sbjct: 2   AILEYIMLLFIG-LIAGTVGSLVGLGGGIIIVPL------LIGL-HSLSPQLAVGTSMVT 53

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA-----FAI 132
           +  T + S + + +H  ++ K       +L I +    ++ S  +K FLN+      F I
Sbjct: 54  VVFTGLSSTLTYMKHKRVDYK----SGLILFIGSGPGGIIGSWANK-FLNQDTFSLYFGI 108

Query: 133 FCLLMGILMLKRDRL---------YCERKFPDN-----------YVKYIWGMVTGFLSGA 172
           F + + IL++ RD+L           +R F DN           ++      + GF+SG 
Sbjct: 109 FLIFVSILLMLRDKLKPLSLSNTSVIKRSFTDNDGNTVHYQFPPFLAIFIAFIVGFISGL 168

Query: 173 LGVGGG-IFTNLLMLFYGASIYKATATS 199
            G+GGG +    +ML +    + A ATS
Sbjct: 169 FGIGGGALLVPAMMLLFAFPAHIAVATS 196



 Score = 38.1 bits (87), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 154 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 206

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 207 SSATHISLGNVS------WIYAL 223


>gi|328552216|gb|AEB22708.1| permease [Bacillus amyloliquefaciens TA208]
          Length = 247

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 13/146 (8%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI-LKDWIFV-------LPITTVVTSL 116
           + +H A+GTSL  +A TS+     H R G I MKI L   +F          +T+++ + 
Sbjct: 35  VPIHTALGTSLAGMAFTSLSGAFSHYREGNIQMKIGLIVGVFAAFGSFFGARLTSLIPAD 94

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN-YVK-YIWGMVTGFLSGALG 174
           ++ ++    L    +   +L+ + +LK  +    R+   N +VK  + G++ G LSG  G
Sbjct: 95  LLHYLTAGMLF--LSALLILVRLFILKETQEDSGRQSNLNIWVKAVVLGIIAGILSGTFG 152

Query: 175 VGGGIFTNL-LMLFYGASIYKATATS 199
           +G   F  + LM+    SI ++  T+
Sbjct: 153 IGSAPFIQIGLMILLRLSIRQSVGTT 178


>gi|308172393|ref|YP_003919098.1| integral inner membrane protein [Bacillus amyloliquefaciens DSM 7]
 gi|307605257|emb|CBI41628.1| putative integral inner membrane protein [Bacillus
           amyloliquefaciens DSM 7]
 gi|328910487|gb|AEB62083.1| putative integral inner membrane protein [Bacillus
           amyloliquefaciens LL3]
          Length = 252

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 13/146 (8%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI-LKDWIFV-------LPITTVVTSL 116
           + +H A+GTSL  +A TS+     H R G I MKI L   +F          +T+++ + 
Sbjct: 40  VPIHTALGTSLAGMAFTSLSGAFSHYREGNIQMKIGLIVGVFAAFGSFFGARLTSLIPAD 99

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN-YVK-YIWGMVTGFLSGALG 174
           ++ ++    L    +   +L+ + +LK  +    R+   N +VK  + G++ G LSG  G
Sbjct: 100 LLHYLTAGMLF--LSALLILVRLFILKETQEDSGRQSNLNIWVKAVVLGIIAGILSGTFG 157

Query: 175 VGGGIFTNL-LMLFYGASIYKATATS 199
           +G   F  + LM+    SI ++  T+
Sbjct: 158 IGSAPFIQIGLMILLRLSIRQSVGTT 183


>gi|315230494|ref|YP_004070930.1| hypothetical protein TERMP_00730 [Thermococcus barophilus MP]
 gi|315183522|gb|ADT83707.1| hypothetical protein TERMP_00730 [Thermococcus barophilus MP]
          Length = 251

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 36/232 (15%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH-RRHGTINMKILKDWIFVL 107
           VPVL+    L+G+     +H A+GTSL  I+ +++ S   H RR   +   ++    F +
Sbjct: 30  VPVLT----LLGLP----IHEAIGTSLACISMSALASAYGHLRRKNVLFRVVVIKEAFSI 81

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK--------RDRLYCERKFPDNYVK 159
           P + ++ + + + ++   L+  F    + +   ++K        R+     RK P     
Sbjct: 82  P-SALLGAYITAFLNTRQLSAIFGFALIYVAYKLIKKPETPSVKRNVKVDYRKVP----- 135

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            + G+V+GF SG LG+ GGI    L    G  I+ A  TS   S  + F AL        
Sbjct: 136 -VIGVVSGFSSGLLGISGGILNVPLFYSLGLPIHYAIGTS---SVALFFTAL-------A 184

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           G  G   + LG V+    +++ P  IL      +L++ I  + L +GFS+I+
Sbjct: 185 GTVG--HYILGQVHFDKAILLAPGLILGGFSGARLAHEIHPERLKMGFSLIL 234


>gi|124266697|ref|YP_001020701.1| hypothetical protein Mpe_A1504 [Methylibium petroleiphilum PM1]
 gi|124259472|gb|ABM94466.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 255

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 20/163 (12%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D+I ++I   F  G + G+ GVGGG +M P++   F L          VA+GT L     
Sbjct: 2   DFIAVLI--GFGVGAIVGMTGVGGGSLMTPLMLGVFGL-------PPAVAIGTDLWFAGL 52

Query: 81  TSVMSFMEHRRHGTINMKILKDWIF-VLPITTVVTSLM----ISHVDKSFLNKAFAIFCL 135
           T +   + H R   I+  ILK  +   +P      +LM    ++    S L  A  I  L
Sbjct: 53  TKISGSIAHWRQQHIDHDILKQLLMGSIPAALATIALMHATGVTKAWASALTLALGIALL 112

Query: 136 LMGILMLKRDRLYC-----ERKFPDNYVKYIWGMVTGFLSGAL 173
           +  + +  R   +      ER  P    K  W + +G + G L
Sbjct: 113 ITAVTVAYRQAWHAVGLKLERWLPQER-KAAWTVASGVVLGVL 154


>gi|188587474|ref|YP_001919019.1| permease, putative [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179352161|gb|ACB86431.1| permease, putative [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 120

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 16/118 (13%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI V  F++G ++GL  +GGG V++P L    Q       I  HVA G +L    P S++
Sbjct: 7   LIYVIGFITGIVTGL-ALGGGAVLIPFLVLLVQ-------IEQHVAQGVTLIAFLPMSII 58

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF----LNKAFAIFCLLMG 138
           + + H + G +N    K  I  L   +++ ++  + +  SF    L K +  F ++MG
Sbjct: 59  AIITHYKQGNVN----KSLIIPLASGSIIGAIGGAILAMSFSPEVLTKIYGGFLIVMG 112


>gi|296188121|ref|ZP_06856513.1| membrane protein, putative [Clostridium carboxidivorans P7]
 gi|296047247|gb|EFG86689.1| membrane protein, putative [Clostridium carboxidivorans P7]
          Length = 256

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 20/161 (12%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA F +  +  + G GGG++ VP    AF L G+      H+ +GT+       S  S +
Sbjct: 15  VAGFFAAFVDSIAG-GGGIISVP----AFLLAGVPP----HITLGTNKFSSTCASFTSSL 65

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHV---DKSFLNKAFAIFCLLMGILMLKR 144
           +  + G +++KILK   F+LP T +   L ++ V   D  +LN       L +GI  L  
Sbjct: 66  KFMQSGKVDLKILK---FLLPFTVIGAVLGVNTVLIIDAKYLNMIVLTLLLFVGIYSLFS 122

Query: 145 DRLYCERKFPDNYVK-YIWGMV----TGFLSGALGVGGGIF 180
             +  E KF     K  I G++     GF  G  G G G F
Sbjct: 123 KSIGKEDKFKGLCKKSLILGILLAFSLGFYDGFFGPGTGSF 163


>gi|146303869|ref|YP_001191185.1| hypothetical protein Msed_1097 [Metallosphaera sedula DSM 5348]
 gi|145702119|gb|ABP95261.1| protein of unknown function DUF81 [Metallosphaera sedula DSM 5348]
          Length = 262

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 35/209 (16%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D I ++++     G L+G+ G  G L++VP LS  +  +   DS+      G+SL V   
Sbjct: 13  DSIIILLLVGIAVGALTGITGSSGVLIVVPALS--YLGLSFVDSV------GSSLWVDII 64

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-----DKSFLNKAFAIFCL 135
           T++     + RHG +++K       ++ +  V+ + + S +     DK  L  AF +F  
Sbjct: 65  TTLSVIFVYFRHGNVDLKTS----LIMGVGAVLGAQLGSRLAFITPDK-LLEGAFTVFTT 119

Query: 136 LMGILMLKRDRLYCERKFPDNYVKY------IWGMVTGFLSGALGVGGGI-FTNLLMLFY 188
           +M  +  +R R    +    N   +      I  +V G ++G LG  GGI F  ++M+ +
Sbjct: 120 VMAYVSFRRSRNPSLKIRTRNLGTWSYVLAPILSVVIGIVTGTLGASGGIMFIAVMMMLF 179

Query: 189 GASIYKA----------TATSAGVSALIA 207
              + +           +A S GVS  IA
Sbjct: 180 SMDVRRMIGTATLAMLLSAVSGGVSYAIA 208


>gi|14521729|ref|NP_127205.1| hypothetical protein PAB1010 [Pyrococcus abyssi GE5]
 gi|5458948|emb|CAB50435.1| Predicted permease [Pyrococcus abyssi GE5]
          Length = 253

 Score = 40.4 bits (93), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 21/180 (11%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V   ++GTL+ +FG+GGG ++VP+L     LMG++    +H A+GTS   I  T++ S  
Sbjct: 12  VTGVVTGTLAAMFGLGGGFLLVPIL----NLMGVE----IHHAVGTSSASIIFTALSSSY 63

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSL----MISHVDKSFLNKAFAIFCLLMGILMLK 143
            + R      +IL     +L  T VV +     M S +    L   F +  + +   M +
Sbjct: 64  AYHR----QKRILYRVGILLASTAVVGAYLGAWMTSFISPGKLKVIFGVTLIFVAYRMFR 119

Query: 144 RDRLYCERKFP---DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
             R   ER+     +  +  I G  +G  SG LGVGGGI    L+ + G  I+ A ATS+
Sbjct: 120 GKR--GERREEISVNEKLVPIGGFFSGIASGLLGVGGGIINVPLLTWLGVPIHYAVATSS 177


>gi|331660876|ref|ZP_08361808.1| conserved hypothetical protein [Escherichia coli TA206]
 gi|315298927|gb|EFU58181.1| conserved hypothetical protein [Escherichia coli MS 16-3]
 gi|331051918|gb|EGI23957.1| conserved hypothetical protein [Escherichia coli TA206]
          Length = 266

 Score = 40.4 bits (93), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 109/268 (40%), Gaps = 61/268 (22%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-T 94
           LS LFGVGG +++VPVL   F          + V   TSL V+  +++++     R G  
Sbjct: 19  LSALFGVGGSILLVPVLHLLF------PQCAVQVLAATSLTVVILSALINVCAFWRQGIR 72

Query: 95  INMKILKDWIFVLPI---TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK---RDRLY 148
           +N ++L  W   +       V  S ++S  DK  L     +F L++  L L+     +  
Sbjct: 73  LNTRLLVLWSLGMATGMQAGVYASFLLS--DKVLL----MLFALVLVGLALRCGYSRQTT 126

Query: 149 CERKFPDNYVKYIWGMVT----GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            E   PDN  +   GM+     G ++G  G+GGG     LM                 S 
Sbjct: 127 QENVQPDNRTRST-GMLLCTAGGAVAGLTGLGGGSVLAPLM-----------------SQ 168

Query: 205 LIAFPALLVRIYSGWGL-------------------NGLPP-WSLGFVNIGAVLIILPIS 244
           L   P   + +Y  W +                     LPP    G+VN+  V +I   +
Sbjct: 169 LSGIPRQHIAVYCNWMMVFGSAGTVVSYLYRTAPDTGALPPSMQFGYVNMAIVAVIFFCT 228

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMF 272
           ++  P++ +L  ++ + +L   FS ++ 
Sbjct: 229 LVFQPVSMRLRTLLPECWLQRVFSGVLL 256


>gi|229151869|ref|ZP_04280067.1| hypothetical protein bcere0011_34100 [Bacillus cereus m1550]
 gi|228631574|gb|EEK88205.1| hypothetical protein bcere0011_34100 [Bacillus cereus m1550]
          Length = 245

 Score = 40.4 bits (93), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV----TSLMISH 120
           I +HVA+ TSL  +A T++   + H R G +   I         I + +     SL+ +H
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVVSHYREGNVAFIIGGIVGGFGAIGSYIGSKFGSLIPAH 88

Query: 121 VDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKFPDNY-VKYI-WGMVTGFLSGAL 173
           +   F        AIF  +  I+   +++  LY  ++F  NY +K I  G+VTG ++G+ 
Sbjct: 89  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKEFSMNYLLKCICLGLVTGMMAGSF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+    +I +    S G + L+  P     I  G G        LG+ 
Sbjct: 149 GIGSAPFIQLGLMVLLRLTIQQ----SVGTTMLVILP-----IAIGGG--------LGYS 191

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           + G +  IL + +LI    T L   IG K+      + + FSMIM
Sbjct: 192 SEGYLDNILLLQVLI---GTMLGAYIGAKFTNYAPRMLLRFSMIM 233


>gi|229168389|ref|ZP_04296113.1| hypothetical protein bcere0007_33460 [Bacillus cereus AH621]
 gi|228615033|gb|EEK72134.1| hypothetical protein bcere0007_33460 [Bacillus cereus AH621]
          Length = 245

 Score = 40.4 bits (93), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         + + + S   S +   
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVVSHYREGNVVLVIGGVVGGFGALGSYIGSKFGSLIPAH 88

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKF----------PDNYVKYIW-GMVTGFLSGAL 173
            L+   A    L  I M  R  ++ +R             DN +K I+ G+VTG L+GA 
Sbjct: 89  LLHWFTAGMLFLSAIFMFIRLIMFQKRSQSSLNGHKELSKDNVIKCIFLGLVTGILAGAF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I +    S G + L+  P   + I  G+G +     S G++
Sbjct: 149 GIGSAPFIQLGLMVLLGLTIRQ----SVGTTMLVILP---IAIGGGFGYS-----SEGYL 196

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           +      +L + +LI    T L   IG K+      + + FSMIM
Sbjct: 197 D-----YVLLVQVLI---GTMLGAYIGAKFTNYAPRMLLRFSMIM 233


>gi|228474294|ref|ZP_04059029.1| putative membrane protein [Staphylococcus hominis SK119]
 gi|314936856|ref|ZP_07844203.1| putative membrane protein [Staphylococcus hominis subsp. hominis
           C80]
 gi|228271653|gb|EEK13000.1| putative membrane protein [Staphylococcus hominis SK119]
 gi|313655475|gb|EFS19220.1| putative membrane protein [Staphylococcus hominis subsp. hominis
           C80]
          Length = 275

 Score = 40.4 bits (93), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 7/67 (10%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A+   G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS + 
Sbjct: 164 ATLFIGVLTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSIG 216

Query: 89  HRRHGTI 95
           H   G +
Sbjct: 217 HIIQGHV 223


>gi|229080934|ref|ZP_04213448.1| hypothetical protein bcere0023_35750 [Bacillus cereus Rock4-2]
 gi|228702351|gb|EEL54823.1| hypothetical protein bcere0023_35750 [Bacillus cereus Rock4-2]
          Length = 258

 Score = 40.4 bits (93), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV----TSLMISH 120
           I +HVA+ TSL  +A T++   + H R G +   I         I + +     SL+ +H
Sbjct: 42  IPIHVALATSLTAMAFTTLSGVVSHYREGNVAFIIGGIVGGFGAIGSYIGSKFGSLIPAH 101

Query: 121 VDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKFPDNY-VKYI-WGMVTGFLSGAL 173
           +   F        AIF  +  I+   +++  LY  ++F  NY +K I  G+VTG ++G+ 
Sbjct: 102 LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKEFSMNYLLKCICLGLVTGMMAGSF 161

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+    +I +    S G + L+  P     I  G G        LG+ 
Sbjct: 162 GIGSAPFIQLGLMVLLRLTIQQ----SVGTTMLVILP-----IAIGGG--------LGYS 204

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLT------IGFSMIM 271
           + G +  IL + +LI    T L   IG K+        + FSMIM
Sbjct: 205 SEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRTLLRFSMIM 246


>gi|284040012|ref|YP_003389942.1| hypothetical protein Slin_5171 [Spirosoma linguale DSM 74]
 gi|283819305|gb|ADB41143.1| protein of unknown function DUF81 [Spirosoma linguale DSM 74]
          Length = 265

 Score = 40.4 bits (93), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 19/118 (16%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G L+G  G GGG ++VP+L     LM     + M  A+ TS+ +IA  S + F+   +H 
Sbjct: 159 GLLTGTIGAGGGFLIVPMLV----LMA---GLPMPRAVATSVLIIAVNSFVGFIGDIQHT 211

Query: 94  TINMKILKDWIFVLPITTV-VTSLMISHVDKSF-----LNKAFAIFCLLMGILMLKRD 145
                   DW F+LP T + +  + I      F     L K F  F L++ + M+ R+
Sbjct: 212 Q------PDWNFLLPFTGLSIIGIFIGMYSAQFVPPDKLKKGFGWFVLVVALYMISRE 263



 Score = 38.1 bits (87), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 48/222 (21%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +S+  +  Y   I+V     G + GL G GG ++ VP+    F       +I   +A   
Sbjct: 1   MSEQELFGYASAIVV-----GLVIGLAGGGGSILTVPIFVYVF-------NIPTVLATTY 48

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA---- 129
           SL V+  TS++  + +  H  ++++      F LP      S +  ++ + FL  A    
Sbjct: 49  SLFVVGSTSLVGSLNYIWHRKVDLR--ATVAFALP------SFISVYLSRRFLVPALPDP 100

Query: 130 ------------------FAIFCLLMGILMLKRDRLYCERKFPDNYVKY----IWGMVTG 167
                             FAI  ++    M+K DR   + +  D   +Y    + G+  G
Sbjct: 101 LFQFERFVLSKSEAILYFFAIVMIIAARAMIKSDR-PEQGEAADGRPRYGNLALDGLAVG 159

Query: 168 FLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAF 208
            L+G +G GGG +   +L+L  G  + +A ATS  + A+ +F
Sbjct: 160 LLTGTIGAGGGFLIVPMLVLMAGLPMPRAVATSVLIIAVNSF 201


>gi|297567165|ref|YP_003686137.1| hypothetical protein Mesil_2784 [Meiothermus silvanus DSM 9946]
 gi|296851614|gb|ADH64629.1| protein of unknown function DUF81 [Meiothermus silvanus DSM 9946]
          Length = 119

 Score = 40.4 bits (93), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 8/68 (11%)

Query: 33 SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPTSVMSFMEHRR 91
          +G LSGLFG+GGG+++VP L     L+G+D       A GTSL  ++ P  ++  + + R
Sbjct: 13 AGLLSGLFGIGGGVIVVPAL---IFLLGLDQ----RTATGTSLAALLLPVGILGVLAYAR 65

Query: 92 HGTINMKI 99
           G +   +
Sbjct: 66 EGAVRWPV 73


>gi|158929996|gb|ABW82977.1| permease [uncultured bacterium pEAF66]
          Length = 257

 Score = 40.4 bits (93), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 7/75 (9%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IV+ F  G L G+ GVGGG +M P+L+  F   G+  S    VA+GT L   + T     
Sbjct: 6   IVSGFAVGLLVGMTGVGGGSLMTPLLTLIF---GVPPS----VAVGTDLAFASITKSAGA 58

Query: 87  MEHRRHGTINMKILK 101
             HR  GT+   I+K
Sbjct: 59  FTHRLRGTVRWDIVK 73


>gi|256619334|ref|ZP_05476180.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|256598861|gb|EEU18037.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|323480997|gb|ADX80436.1| conserved hypothetical protein [Enterococcus faecalis 62]
          Length = 258

 Score = 40.4 bits (93), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 34/254 (13%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+ T+  + G+GGG+++ P+           D I  H     S         MS +   R
Sbjct: 12  LANTVGAVSGMGGGVLIKPIF----------DFIGAHSVAAISFYSTVAVFTMSLVSTAR 61

Query: 92  HGTINMKILKDWIFVLPITT------VVTSLMISHVDKSFLNK-AFAIFCLLMGILMLKR 144
                 KI  +W  VL ++       ++ ++   H+   F N+    +  + + ++ L  
Sbjct: 62  QLASGRKI--NWQIVLWVSGGAVLGGILGNVAFDHLLLLFQNEDEVQMIQIFLTVVTLLF 119

Query: 145 DRLYCERKFPD-NYVKYIW----GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATAT 198
              Y +  +P     K  W    G+V GFL+  LG+GGG I  +LLML +   I +AT  
Sbjct: 120 AFFYTKYDWPGFQLKKNFWYCFCGLVLGFLASLLGIGGGPINVSLLMLMFALPIKEATV- 178

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
               S    F + L +I +  G  G      G  ++  +  ++P +I+   L  K+S ++
Sbjct: 179 ---YSICTIFFSQLAKIVTIAGTTG-----FGLYDLKILWFVIPAAIVGGLLGAKVSTVL 230

Query: 259 GKKYLTIGFSMIMF 272
             + +T+ F  ++F
Sbjct: 231 SPQKVTLVFQTVIF 244


>gi|330508724|ref|YP_004385152.1| hypothetical protein MCON_2999 [Methanosaeta concilii GP-6]
 gi|328929532|gb|AEB69334.1| protein of unknown function (DUF81) [Methanosaeta concilii GP-6]
          Length = 289

 Score = 40.4 bits (93), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 40/225 (17%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           + D     + +++V  F++G L GL G GG  +M+P +      MG    +    A+GT+
Sbjct: 26  APDLTPLRVIMLVVVGFIAGVLGGLIGTGGCSIMLPAIHF---WMGYSAPL----AIGTT 78

Query: 75  LGVIAPTSVMSFMEHRRHGTINMK-------------ILKDWIFVLPITTVVTSLMISHV 121
           +  +  T++     H     ++ K             IL  W+F         ++++ H+
Sbjct: 79  IFAVIFTAISGGYGHLVRRNLDRKAVLWIGGAGILGVILGSWLF---------TMLVDHI 129

Query: 122 DKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV---KYIW---GMVTGFLSGALGV 175
           D   L     +  LL  I M+       + +   N +   K  W   G + G L+G +G+
Sbjct: 130 D--LLQLILGLAFLLPAIRMIWEGAGRAKPRQEGNEIPGRKSHWAVFGFLIGILTGIVGL 187

Query: 176 GGG--IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           GGG  +   L+ LF GA +Y    +S  V   +A  A  +++Y G
Sbjct: 188 GGGYALVPGLIYLF-GAPVYITMGSSLAVMIPLAAVAGSIKLYQG 231


>gi|229098111|ref|ZP_04229059.1| hypothetical protein bcere0020_33450 [Bacillus cereus Rock3-29]
 gi|229117129|ref|ZP_04246508.1| hypothetical protein bcere0017_34090 [Bacillus cereus Rock1-3]
 gi|228666297|gb|EEL21760.1| hypothetical protein bcere0017_34090 [Bacillus cereus Rock1-3]
 gi|228685302|gb|EEL39232.1| hypothetical protein bcere0020_33450 [Bacillus cereus Rock3-29]
          Length = 251

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 22/152 (14%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI---------LKDWIFVLPITTVVTS 115
           I +HVA+ TSL  +A T++   + H R G + + I         L  +     I +   S
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLMIGGIVGGFGALGSY-----IGSKFGS 89

Query: 116 LMISHVDKSFLNKAF---AIFCLLMGILMLKRDR--LYCERKF-PDNYVKYI-WGMVTGF 168
           L+ +H+   F        AIF  +  I+ L + +  L  ++K   +N +K I  G+VTG 
Sbjct: 90  LIPAHLLHWFTAGMLFLSAIFMFIKLIMSLNKQQPPLCGQKKLSKNNLMKCICLGLVTGM 149

Query: 169 LSGALGVGGGIFTNL-LMLFYGASIYKATATS 199
           L+G+ G+G   F  L LM+  G +I ++  T+
Sbjct: 150 LAGSFGIGSAPFIQLGLMVLLGLTIQQSVGTT 181


>gi|329888276|ref|ZP_08266874.1| hypothetical protein BDIM_01990 [Brevundimonas diminuta ATCC 11568]
 gi|328846832|gb|EGF96394.1| hypothetical protein BDIM_01990 [Brevundimonas diminuta ATCC 11568]
          Length = 259

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 6/106 (5%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           GL G GG ++ VP++     L+G+ D    H+A+GTS   +A  +  + + H R G +  
Sbjct: 18  GLVGGGGSILAVPLI---VYLVGVKDP---HLAIGTSAFAVAANAFANLLNHARRGAVKW 71

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           KI   +     +   + S +   VD   L   FA+  L++G LML+
Sbjct: 72  KIALLFAAAGVVGAALGSSLGKAVDGQKLLALFAVLMLVVGALMLR 117


>gi|317130121|ref|YP_004096403.1| hypothetical protein Bcell_3430 [Bacillus cellulosilyticus DSM
           2522]
 gi|315475069|gb|ADU31672.1| protein of unknown function DUF81 [Bacillus cellulosilyticus DSM
           2522]
          Length = 274

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 13/81 (16%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+  F+ G  SGLFG+GGG +MVP +   F           H+A+ TS+ +I  ++++S 
Sbjct: 159 ILIGFVVGMCSGLFGIGGGSLMVPAMILLF-------GFPPHIAVATSMLMIFLSAILSS 211

Query: 87  MEHRRHGTINMKILKDWIFVL 107
           + H   G I      DW++VL
Sbjct: 212 VSHMALGNI------DWLYVL 226


>gi|78047860|ref|YP_364035.1| hypothetical protein XCV2304 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|121593750|ref|YP_985646.1| hypothetical protein Ajs_1353 [Acidovorax sp. JS42]
 gi|78036290|emb|CAJ23981.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|120605830|gb|ABM41570.1| protein of unknown function DUF81 [Acidovorax sp. JS42]
          Length = 268

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 11/116 (9%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           +SG  +G+ GVGGG ++VP L+   +L        MH  + TSL VIA  S ++      
Sbjct: 160 VSGLATGMLGVGGGFIIVPALAHFSELR-------MHSIVATSLMVIALLSAVTVFIAWS 212

Query: 92  HGTINMKILKDWIFVLP--ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           HG +       W FVL   +       +   +    L + F+I C+ +  LML R+
Sbjct: 213 HGLLLTA--PTWAFVLTALVGMAGGRAVALRIPSKMLQRVFSITCVSVAALMLMRN 266


>gi|288959672|ref|YP_003450013.1| hypothetical protein AZL_028310 [Azospirillum sp. B510]
 gi|288911980|dbj|BAI73469.1| hypothetical protein AZL_028310 [Azospirillum sp. B510]
          Length = 305

 Score = 40.0 bits (92), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 8/75 (10%)

Query: 25 LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
          L++   +L G LSG+FGVGGG +M P+L      +G+  +I    A+GT    +   SV 
Sbjct: 16 LVLGMGWLVGFLSGMFGVGGGFLMTPLLI----FIGVPPAI----AVGTQANQLVAASVS 67

Query: 85 SFMEHRRHGTINMKI 99
            + H R G +++K+
Sbjct: 68 GVLAHWRRGNVDVKL 82


>gi|46198738|ref|YP_004405.1| putative permease [Thermus thermophilus HB27]
 gi|46196361|gb|AAS80778.1| putative permease [Thermus thermophilus HB27]
          Length = 245

 Score = 40.0 bits (92), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G LSG+ GVGGG +MVP +     L+G+      H A GTSL  + P S++    H R 
Sbjct: 139 TGFLSGMMGVGGGTIMVPAM---VLLLGMPQ----HTAQGTSLLAMVPASLVGAHTHLRL 191

Query: 93  GTINMKI 99
           G ++  +
Sbjct: 192 GNVDRDL 198



 Score = 36.6 bits (83), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 112/242 (46%), Gaps = 32/242 (13%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           VM+P++    +L         H A GTSL  +  T ++  + +   G++++K        
Sbjct: 23  VMIPLMVGLLKL-------PQHRAHGTSLVTVFFTGLVGALTYGLQGSLDLKA----ALF 71

Query: 107 LPITTVVTS---LMISH-VDKSFLNKAFAIFCLLMGILMLKRDRL----YCERKFPDNYV 158
           L +T ++T+      +H + +  L ++F  F + +  L+L R  L      + +   +  
Sbjct: 72  LALTAILTARFGARFAHGLSERNLKRSFGWFLIAVSFLLLLRPYLAPLGLVQGELLQDLA 131

Query: 159 KYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
             + G  TGFLSG +GVGGG I    ++L  G   +    T+ G S L   PA LV  ++
Sbjct: 132 LLLAGAFTGFLSGMMGVGGGTIMVPAMVLLLGMPQH----TAQGTSLLAMVPASLVGAHT 187

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                      LG V+    L ++P  ++ T L  +L++++ +  L + F+ ++  T + 
Sbjct: 188 --------HLRLGNVDRDLALGLVPGVLVGTFLGGELAHVLPEGALRLVFAAVLVWTGWR 239

Query: 278 FA 279
           +A
Sbjct: 240 YA 241


>gi|69247395|ref|ZP_00604339.1| Protein of unknown function DUF81 [Enterococcus faecium DO]
 gi|258617140|ref|ZP_05714910.1| hypothetical protein EfaeD_15731 [Enterococcus faecium DO]
 gi|68194867|gb|EAN09340.1| Protein of unknown function DUF81 [Enterococcus faecium DO]
          Length = 258

 Score = 40.0 bits (92), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 109/254 (42%), Gaps = 34/254 (13%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+ T+  + G+GGG+++ P+           D I  H     S         MS +   R
Sbjct: 12  LANTVGAVSGMGGGVLIKPIF----------DFIGAHSVAAISFYSTVAVFTMSLVSTAR 61

Query: 92  HGTINMKILKDWIFVLPITT------VVTSLMISHVDKSFLNK-AFAIFCLLMGILMLKR 144
                 KI   W  VL ++       ++ ++   H+   F N+    +  + + ++ L  
Sbjct: 62  QLASGRKI--HWQIVLWVSGGAVLGGILGNVAFDHLLLLFQNEDEVQMIQIFLTVVTLLF 119

Query: 145 DRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATAT 198
              Y +  +P     +N+     G+V GFL+  LG+GGG I  +LLML +   I +AT  
Sbjct: 120 AFFYTKYDWPGFQLKNNFWYCFCGLVLGFLASLLGIGGGPINVSLLMLMFALPIKEATV- 178

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
               S    F + L +I +  G  G      G  ++  +  ++P +I+   L  K+S ++
Sbjct: 179 ---YSICTIFFSQLAKIVTIAGTTG-----FGLYDLKILWFVIPAAIVGGLLGAKVSTVL 230

Query: 259 GKKYLTIGFSMIMF 272
             + +T+ F  ++F
Sbjct: 231 SPQKVTLVFQTVIF 244


>gi|161505006|ref|YP_001572118.1| hypothetical protein SARI_03136 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160866353|gb|ABX22976.1| hypothetical protein SARI_03136 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 266

 Score = 40.0 bits (92), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 109/268 (40%), Gaps = 61/268 (22%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-T 94
           LS LFGVGG +++VPVL   F          + V   TSL V+  +++++     R G  
Sbjct: 19  LSALFGVGGSILLVPVLHLLF------PQCAVQVLAATSLTVVMLSALINVCAFWRQGIR 72

Query: 95  INMKILKDWIFVLPI---TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK---RDRLY 148
           +N ++L  W   +       V  S ++S  DK  L     +F L++  L L+     +  
Sbjct: 73  LNSRLLVLWSLGMATGMQAGVYASFLLS--DKVLL----MLFALVLVGLALRCGYSRQTT 126

Query: 149 CERKFPDNYVKYIWGMVT----GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            E   PDN  +   GM+     G ++G  G+GGG     LM                 S 
Sbjct: 127 QENVQPDNRTRST-GMLLCTAGGAVAGLTGLGGGSVLAPLM-----------------SQ 168

Query: 205 LIAFPALLVRIYSGWGL-------------------NGLPP-WSLGFVNIGAVLIILPIS 244
           L   P   + +Y  W +                     LPP    G+VN+  V +I   +
Sbjct: 169 LSGIPRQHIAVYCNWMMVFGSAGTVVSYLYRTAPDTGALPPSMQFGYVNMAIVAVIFLCT 228

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMF 272
           ++  P++ +L  ++ + +L   FS ++ 
Sbjct: 229 LVFQPVSMRLRTLLPECWLHRVFSGVLL 256


>gi|88857895|ref|ZP_01132537.1| hypothetical protein PTD2_10934 [Pseudoalteromonas tunicata D2]
 gi|88819512|gb|EAR29325.1| hypothetical protein PTD2_10934 [Pseudoalteromonas tunicata D2]
          Length = 258

 Score = 40.0 bits (92), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 15/162 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ + +F +G +  + G GGGL+ VP L  A         +  H+ +GT+    +  S+ 
Sbjct: 13  ILCIVAFAAGFIDAIAG-GGGLLTVPALLTA--------GLPPHLVLGTNKLAASFGSLT 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-- 142
           + + + +    N    K  I    +  ++ +L++ H+   FLNK   I  + + I  L  
Sbjct: 64  ASVTYYKKKLFNPSFWKKSIAATALGALIGTLIVDHLSTDFLNKLLPIVIISVAIYSLFG 123

Query: 143 ---KRDRLYCERKFPDNYVKYI-WGMVTGFLSGALGVGGGIF 180
                + +   +  P+   K I  G+  GF  G  G G G F
Sbjct: 124 SLNHSESVEMPKDIPNLAPKQISQGLALGFFDGVAGPGTGAF 165


>gi|222150801|ref|YP_002559954.1| hypothetical protein MCCL_0551 [Macrococcus caseolyticus JCSC5402]
 gi|222119923|dbj|BAH17258.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 238

 Score = 40.0 bits (92), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 61/116 (52%), Gaps = 13/116 (11%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A+F  G L+GLFG+GGG +M P++   F+          H+A+GTS+ +I  +S+   
Sbjct: 124 VIATFFVGCLTGLFGIGGGALMTPLMIIIFRF-------PPHIAVGTSMIMIFVSSITGA 176

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + H         I+  + F+L   + V + +   ++K+   K+  +  +L  ILML
Sbjct: 177 VSHIAQD----NIIWSYAFILIAASYVGARIGVRINKTM--KSSTVVMMLRVILML 226


>gi|309390296|gb|ADO78176.1| protein of unknown function DUF81 [Halanaerobium praevalens DSM
           2228]
          Length = 255

 Score = 40.0 bits (92), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 19/186 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II A + +G ++GL G    +++ P+L      +G       + A+G SL      S +S
Sbjct: 7   IIFAGWGAGIVTGLVGASAVVIVTPIL---VNFLGYSP----YTAIGISLATDVIASSIS 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              + +HG  ++K          I  +V S +   +  S L  +  I  L +GI  L++ 
Sbjct: 60  AYTYHKHGNTDIKNGIYMTIAAVIAALVGSKLSGQMSDSILGGSTNIVILFLGISFLRKP 119

Query: 146 RLYCERKFPDNYVKYIW-----------GMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
                  F + +    W           G + G + G +G GGG+   L++ F  G S++
Sbjct: 120 IHQRIEDFKEKFDLSFWKKRKLFSSLFFGSLIGLMCGIVGAGGGMIILLILTFVLGYSVH 179

Query: 194 KATATS 199
            A  TS
Sbjct: 180 IAIGTS 185


>gi|206895253|ref|YP_002246813.1| hypothetical protein COPRO5265_0449 [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206737870|gb|ACI16948.1| conserved hypothetical membrane protein [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 262

 Score = 40.0 bits (92), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 30/215 (13%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI++   ++G ++GL G  G +V+VP L       G  D+I      G SL      S++
Sbjct: 5   LIVLVGLIAGVVTGLIGASGVMVIVPGL--VMLGYGAADAI------GASLFADTVASLV 56

Query: 85  SFMEHRRHGTINMKILKDWIFVLPI-TTVVTSLMISHVDKSFLNKAFAIFCLL------- 136
               + + G +N++    WI V  +    V S +  H+ +S L  +F IF ++       
Sbjct: 57  VSWTYYQAGNVNLR-QGWWIAVGSVLGAQVGSYISPHIAESSLGGSFGIFLIITAVIFAL 115

Query: 137 --MGILMLKRDRLYCERKFPDNYVK----------YIWGMVTGFLSGALGVGGGIFTNLL 184
             MG ++    +    ++ P+  +K           I G + G +SG LG GGG+   L+
Sbjct: 116 RGMGTVIGVNGQQVEAKREPNKLLKILRKNVVLSSLILGFLVGIISGLLGAGGGVMILLI 175

Query: 185 MLFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
           ++F    S+++   TS  + A  A    +   ++G
Sbjct: 176 LVFVLEYSMHEGVGTSTFIMAFTAASGAIGHAFTG 210


>gi|284005856|ref|YP_003391675.1| protein of unknown function DUF81 [Spirosoma linguale DSM 74]
 gi|283821040|gb|ADB42876.1| protein of unknown function DUF81 [Spirosoma linguale DSM 74]
          Length = 268

 Score = 40.0 bits (92), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 19/123 (15%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L G ++G+ G GGG +++P L        +   + M  A+G+SL +IA  S++ F     
Sbjct: 158 LVGLVTGIVGAGGGFLIIPTLV-------LFARLPMKTAIGSSLLIIAFNSLVGFTSSPA 210

Query: 92  HGTINMKILKDWIFVLPITTV------VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              I      DW F+   T +      + S +  ++    L KAF  F L MG+ +L ++
Sbjct: 211 DQVI------DWGFLSVFTALSVGGIFLGSQLARYIAGQHLRKAFGWFVLGMGVFILAKE 264

Query: 146 RLY 148
            L+
Sbjct: 265 LLF 267


>gi|150017843|ref|YP_001310097.1| hypothetical protein Cbei_3002 [Clostridium beijerinckii NCIMB
           8052]
 gi|149904308|gb|ABR35141.1| protein of unknown function DUF81 [Clostridium beijerinckii NCIMB
           8052]
          Length = 272

 Score = 40.0 bits (92), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 34/214 (15%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           FL G    L G GGG ++VP+L   +     D    +      SL V+   ++     + 
Sbjct: 12  FLVGAFGTLIGAGGGFILVPILLLLYPDKSPDTITSI------SLAVVFFNALSGSFAYS 65

Query: 91  RHGTINMKILKDWIFVLPIT--TVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR---- 144
           R   I+ K     IF +     +++ S++ S+V +   N  F +  +++ + ++ R    
Sbjct: 66  RMKRIDYK--SGIIFAIATLPGSILGSVITSYVPRQLFNGIFGVLLVIISVFLILRTKDE 123

Query: 145 ---DRLYCERKFPDNYVKYIWG----------------MVTGFLSGALGVGGGIF-TNLL 184
              +RL  +  +    V  I G                +  GF+S  LG+GGGI    +L
Sbjct: 124 KAENRLVVKNGYITRTVVDIEGIEHTFSYNPVTGIVVSIFVGFMSSFLGIGGGIIHVPVL 183

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           +      ++ ATATS  V A+++    +V I +G
Sbjct: 184 VNILNYPVHIATATSHFVLAVMSLSGTMVHIVNG 217


>gi|253583632|ref|ZP_04860830.1| membrane protein [Fusobacterium varium ATCC 27725]
 gi|251834204|gb|EES62767.1| membrane protein [Fusobacterium varium ATCC 27725]
          Length = 276

 Score = 39.7 bits (91), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 18/184 (9%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA F +  +  + G GGGL+ +P    AF   G+      HVA+GT+      +++ S  
Sbjct: 18  VACFFAAFIDAIAG-GGGLISLP----AFLASGLPA----HVALGTNKVAACCSTIASSA 68

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
           +  + G IN +++K       I  V+    +  +D  +L     +  +++ +  L+   L
Sbjct: 69  KFAQSGKINWQLMKKLAIFSFIGAVLGVKTVVMIDSKYLYPIAIVLLIMVLLYTLRNKNL 128

Query: 148 YCERKFPD-NYVKYIWGMVT----GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
             E +F   N     WG+V     GF  G  G G G F    ++F    I+K   T+A  
Sbjct: 129 GEENRFEGLNGTNVKWGIVMAFALGFYDGFFGPGTGSF----LIFAMIRIFKIDFTNASG 184

Query: 203 SALI 206
           +A I
Sbjct: 185 NAKI 188


>gi|254420823|ref|ZP_05034547.1| conserved domain protein, putative [Brevundimonas sp. BAL3]
 gi|196187000|gb|EDX81976.1| conserved domain protein, putative [Brevundimonas sp. BAL3]
          Length = 264

 Score = 39.7 bits (91), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 10/137 (7%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           GL G GG ++ VP++     L+G+ D    H+A+GTS   +A  +  + + H RHGT+  
Sbjct: 23  GLVGGGGSILAVPLI---VYLVGVKDP---HLAIGTSAFAVAANAFANLLNHARHGTVKW 76

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF---P 154
           KI   +         + S +   VD   L   FA   L++G+LML+      +      P
Sbjct: 77  KIAGLFALAGVFGAFLGSSLGKAVDGQKLLALFAALMLVVGVLMLRGRSASGDPDVVLTP 136

Query: 155 DNYVKYIW-GMVTGFLS 170
            N  K +  G +TG +S
Sbjct: 137 GNAPKLVGAGALTGIMS 153


>gi|254507862|ref|ZP_05119992.1| permease with 5 transmembrane domains [Vibrio parahaemolyticus 16]
 gi|219549235|gb|EED26230.1| permease with 5 transmembrane domains [Vibrio parahaemolyticus 16]
          Length = 259

 Score = 39.7 bits (91), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 18/186 (9%)

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI---LMLKRDRL 147
           R+G +++K ++  I    I + V +  + ++D   L     I  + + +   LM K  + 
Sbjct: 67  RNGIVSIKEMRLAIACTFIGSAVGAEAVQYIDAGVLTSLIPILLVAISLYFLLMPKTKQH 126

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALI 206
             E K  +    +  G   GF  G  G G G IFT   + F   S+  ATA +  ++   
Sbjct: 127 SGEAKVSEAMFAFSVGGGVGFYDGFFGPGTGSIFTVCFVAFGHFSLVDATARTKVLNFTS 186

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILPISILITPLATKLSYM 257
              ALL  I     L GLP W LG V          +GA +++      I PL   +S +
Sbjct: 187 NIAALLFFI-----LAGLPVWELGLVMAIGGFMGAQLGAKVVVTKGQKWIRPLVITMSML 241

Query: 258 IGKKYL 263
           +  K L
Sbjct: 242 MALKLL 247


>gi|332158788|ref|YP_004424067.1| hypothetical protein PNA2_1147 [Pyrococcus sp. NA2]
 gi|331034251|gb|AEC52063.1| hypothetical protein PNA2_1147 [Pyrococcus sp. NA2]
          Length = 249

 Score = 39.7 bits (91), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 22/185 (11%)

Query: 25  LIIVASFLS----GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           LI + SF+     GTL+ +FG+GGG ++VP+L+    +MG++    +H A+GTS   I  
Sbjct: 2   LIFLKSFIVGIVTGTLAAMFGLGGGFLLVPILN----MMGVE----IHHAIGTSSASIIF 53

Query: 81  TSV-MSFMEHRRHGTINMKILKDWIFVLPITTVVTSL----MISHVDKSFLNKAFAIFCL 135
           T++  S+  HR+      +I  D   +L  T +V +     + S +    L   F I  +
Sbjct: 54  TALSSSYAYHRQR-----RIYYDVGILLASTAIVGAYIGAWLTSIISPGKLKVIFGISLI 108

Query: 136 LMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            +   M+++     E+   +  V  + G  +G +SG LGVGGGI     + + G  I+ A
Sbjct: 109 FVAYRMIRKRGEGKEKAEINKKVVPVGGFFSGVISGLLGVGGGIINVPFLTWLGVPIHYA 168

Query: 196 TATSA 200
            ATS+
Sbjct: 169 VATSS 173


>gi|217961088|ref|YP_002339656.1| hypothetical protein BCAH187_A3714 [Bacillus cereus AH187]
 gi|217067331|gb|ACJ81581.1| conserved hypothetical protein [Bacillus cereus AH187]
          Length = 251

 Score = 39.7 bits (91), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 48/230 (20%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI---------LKDWIFVLPITTVVTS 115
           I +HVA+ TSL  +A T++   + H R G + + I         L  +     I + + S
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGALGSY-----IGSKIGS 89

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILMLK----RDRLYCERK--FPDNYVKYI-WGMVTGF 168
           L+  H+   F      +  + M I ++K     + L  E K    +N +K I  G+VTG 
Sbjct: 90  LIPGHLLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGM 149

Query: 169 LSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           ++G+ G+G   F  L LM+  G +I +    S G + L+  P     I  G G       
Sbjct: 150 MAGSFGIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----IAIGGG------- 193

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
            LG+ + G +  IL + +LI    T L   IG K+      + + FSMIM
Sbjct: 194 -LGYSSEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRMLLKFSMIM 239


>gi|325968834|ref|YP_004245026.1| permease [Vulcanisaeta moutnovskia 768-28]
 gi|323708037|gb|ADY01524.1| putative permease [Vulcanisaeta moutnovskia 768-28]
          Length = 279

 Score = 39.7 bits (91), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F+ G +SG FG+GGG ++VP L            +C+  A+GTSL  +    V S  E+ 
Sbjct: 167 FIVGLVSGYFGIGGGFLIVPSLM-------FSAGLCITRAIGTSLLSVGTFGVASGAEYW 219

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +G + + I   ++          + +     K  L  A+    +L+GI ML R
Sbjct: 220 YYGDVLILIALLYVAGGAAGGYAGTSLAVKAPKRALRIAYGAIIVLVGIYMLMR 273


>gi|47567968|ref|ZP_00238675.1| hypothetical protein membrane Spanning protein [Bacillus cereus
           G9241]
 gi|47555446|gb|EAL13790.1| hypothetical protein membrane Spanning protein [Bacillus cereus
           G9241]
          Length = 242

 Score = 39.7 bits (91), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 101/225 (44%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHG----TINMKILKDWIFVLPITTVVTSLMISH 120
           I +HVA+ TSL  +A T++   + H R G    TI   +     F   I + + SL+ S+
Sbjct: 26  IPIHVALATSLTAMAFTTLSGVISHHREGNVVLTIGGIVGGCGAFGSYIGSKMGSLIPSY 85

Query: 121 VDKSFLNKAFAIFCLLMGILMLK--RDRLYCERKFPD----NYVKYIW-GMVTGFLSGAL 173
           +   F      +  + M I ++K       C  K  D    N +K I  G+VTG ++G+ 
Sbjct: 86  LLHWFTAGMLFLSAIFMCIKLIKFQNKEEVCLVKIKDISKENIMKCICLGLVTGMMAGSF 145

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I +    S G + L+  P     I  G G        LG+ 
Sbjct: 146 GIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----IAIGGG--------LGYS 188

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           + G +  IL + +LI    T L   IG K+      + + FSMIM
Sbjct: 189 SEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRMLLKFSMIM 230


>gi|308175949|ref|YP_003915355.1| hypothetical protein AARI_01450 [Arthrobacter arilaitensis Re117]
 gi|307743412|emb|CBT74384.1| conserved hypothetical membrane protein [Arthrobacter arilaitensis
           Re117]
          Length = 288

 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 25/163 (15%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++MVP+LS    + G +       A+ TSL V+  TS  S + H R G  +++  +  +F
Sbjct: 30  ILMVPLLSYVAGMPGKE-------AIATSLLVVGSTSAASLIPHARKG--HVRWAQGLVF 80

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG--ILMLKRDR-LYCERKFPDNYVKYIW 162
                   T+ M+       L ++     L++G  ++ML   R +   RK P      +W
Sbjct: 81  -------ATTSMLGAFGGGLLAESIPAQLLMLGFALIMLASARGMIRGRKNPGGASLPVW 133

Query: 163 -----GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
                G+  G ++G +G GGG +    L L  G S+ +A  TS
Sbjct: 134 LFAPVGLGIGAVTGLVGAGGGFLIVPALALLAGLSMAQAVGTS 176



 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 19/118 (16%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G ++GL G GGG ++VP L+       +   + M  A+GTSL VI   S  +       G
Sbjct: 143 GAVTGLVGAGGGFLIVPALA-------LLAGLSMAQAVGTSLLVITLNSAAALA-----G 190

Query: 94  TINMKILKDWIFV--LPITTVVTSLM---ISH-VDKSFLNKAFAIFCLLMGILMLKRD 145
            +N  +   W     L +T ++ SL+   +SH + +  L K F  F L MG+ +L ++
Sbjct: 191 QLN-SVALHWPLAMSLAVTAILGSLLGARLSHRIAEHRLRKGFGYFVLAMGVFVLSQE 247


>gi|269120710|ref|YP_003308887.1| hypothetical protein Sterm_2102 [Sebaldella termitidis ATCC 33386]
 gi|268614588|gb|ACZ08956.1| protein of unknown function DUF81 [Sebaldella termitidis ATCC
           33386]
          Length = 246

 Score = 39.7 bits (91), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 7/124 (5%)

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
           ++ HV+++F++ A+ IF LL+ +  +   +   E    +   +   G++TG LSG  G+G
Sbjct: 87  LLKHVNENFIDIAY-IFMLLLVLFSVVFRKKIPEINIKNPLAEITIGVLTGGLSGLFGIG 145

Query: 177 GGIFT-NLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           GG F    L++F+G    +A   S  ++ L    +L     + + +NG   +SL    I 
Sbjct: 146 GGPFQVTALIVFFGMDPREAAVDSIFITFLTTLSSL-----TKYTINGYMDFSLALYMIP 200

Query: 236 AVLI 239
           A +I
Sbjct: 201 AAVI 204


>gi|227534217|ref|ZP_03964266.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302]
 gi|227188151|gb|EEI68218.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302]
          Length = 245

 Score = 39.7 bits (91), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 5/134 (3%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A  TSL    P   +    H R G +      + +      T++ SL   H+ +   + A
Sbjct: 42  AAATSLFTAIPALAVGCYSHYRTGNMRFHAGNEILMTAVPATIIGSLAAPHIPEVVYSWA 101

Query: 130 FAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG--IFTNLLML 186
            A+  +++G+ ML++      ++     +  Y+ G ++G + G  G+ GG  I   L+++
Sbjct: 102 IAVIFVVLGVQMLRQSFARKVKKSTQPAWFAYVLGAISGLMVGVAGLSGGGPIMAGLMLM 161

Query: 187 FYGASIYKATATSA 200
             G  +  A ATS+
Sbjct: 162 --GLDMPHAAATSS 173


>gi|116750841|ref|YP_847528.1| hypothetical protein Sfum_3420 [Syntrophobacter fumaroxidans MPOB]
 gi|116699905|gb|ABK19093.1| protein of unknown function DUF81 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 269

 Score = 39.7 bits (91), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 13/159 (8%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M+P++    ++         H A GTSL  +  T +   + + ++G++++         
Sbjct: 23  IMIPLMVDFLKM-------TQHRAHGTSLVAVVFTGLAGAVTYFQNGSVDLTAAGILATA 75

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL-YCERKFPDNYVKYI---- 161
              TT + +     + +  L ++F  F L +  +ML +  L + E  FP    + +    
Sbjct: 76  AIFTTRIGARFAHALPEWKLKRSFGAFLLFVSAMMLAKPYLPHLESFFPSQEARAVILPA 135

Query: 162 WGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            G + GF SG +GVGGG I    ++L  G + + A  TS
Sbjct: 136 SGTLAGFASGMMGVGGGTIMVPAMVLCLGFTQHAANGTS 174


>gi|205375197|ref|ZP_03227988.1| hypothetical protein Bcoam_19517 [Bacillus coahuilensis m4-4]
          Length = 273

 Score = 39.7 bits (91), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 13/81 (16%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I ++F+ G  SGLFG+GGG +MVP +   F           HVA+ TS+ +I  ++++S 
Sbjct: 159 IASAFIVGLTSGLFGIGGGSLMVPAMILLFLF-------PPHVAVATSMFMIFLSAIVSS 211

Query: 87  MEHRRHGTINMKILKDWIFVL 107
           + H   G +      DW++ L
Sbjct: 212 VTHIAFGNV------DWLYAL 226


>gi|291615894|ref|YP_003518636.1| Hypothetical Protein PANA_0341 [Pantoea ananatis LMG 20103]
 gi|291150924|gb|ADD75508.1| Hypothetical Protein PANA_0341 [Pantoea ananatis LMG 20103]
          Length = 265

 Score = 39.7 bits (91), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 11/182 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+IV     G    L G GG ++ VP+L     L+ + D+   H  +GTS   +A ++
Sbjct: 16  VSLLIVTGIAVGFFLALTGGGGSVMCVPLL---LYLVKVPDT---HRVIGTSAIAVAVSA 69

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++   H R G +          V     ++ + +   V   +L   F++    + ++ML
Sbjct: 70  LINLFAHSRKGNVRWATGARISLVAVCGALLGAELGKIVSGQYLLLPFSLLMFSVALMML 129

Query: 143 KRDRLYCERKFPDNYV--KYIWGMV--TGFLSGALGVGGG-IFTNLLMLFYGASIYKATA 197
            +         PD +     +WG V   G L+G +G+GGG +    L+  +   + +A A
Sbjct: 130 GKQSPLPGASAPDRHFAPAIVWGSVLLLGILAGFMGIGGGFLVVPALVWLFRLPMVEAIA 189

Query: 198 TS 199
           TS
Sbjct: 190 TS 191


>gi|114048512|ref|YP_739062.1| hypothetical protein Shewmr7_3021 [Shewanella sp. MR-7]
 gi|113889954|gb|ABI44005.1| protein of unknown function DUF81 [Shewanella sp. MR-7]
          Length = 302

 Score = 39.7 bits (91), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 23/191 (12%)

Query: 41  GVGGGLVMVPVLSK-AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
           G GGG++ +PV S   F  +    +  M    G + G I+ +S   +  H  H       
Sbjct: 67  GAGGGVIFIPVFSSLNFSEVQSVSTSFMIQCFGMTAGAISWSSY--YRRHHHHD------ 118

Query: 100 LKDWIFVLP-----ITTVVTSLMISHV----DKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
            K W   +P      T  V  L  S +      S L+ +F++F +L+GI ++   +    
Sbjct: 119 -KTWSGFIPSILLAATCSVLGLWSSQLWQLNSPSSLHTSFSLFSILLGIAIIISSQRRTL 177

Query: 151 RKFPDNYVKYIWGMVTGFLSGA----LGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
           +    N + Y W  V G+L G     L VG G    + ++  G     A A    VSA+ 
Sbjct: 178 QSHRLNALDYCWLAVIGYLGGIITAWLSVGVGELLVIYLMLRGVCAKMAVAIGVVVSAIT 237

Query: 207 AFPALLVRIYS 217
            + A  + +++
Sbjct: 238 VWSASPIHVFA 248


>gi|218708499|ref|YP_002416120.1| hypothetical protein VS_0463 [Vibrio splendidus LGP32]
 gi|218321518|emb|CAV17470.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 259

 Score = 39.7 bits (91), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 18/186 (9%)

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC- 149
           R+G +++K ++  IF   I + + + ++ H+D S L     +  + + +  L   +    
Sbjct: 67  RNGIVSIKEMRLAIFCTFIGSAIGAELVQHIDASLLTSVIPLLLIAISLYFLLAPQTRAS 126

Query: 150 --ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALI 206
             ++K  +       G   GF  G  G G G IFT   +     S+  ATA +  ++   
Sbjct: 127 EGKQKISEAMFALCIGGGVGFYDGFFGPGTGSIFTVCFVAIGHFSLVDATARTKVLNFTS 186

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILPISILITPLATKLSYM 257
              AL+  I     L GLP W LG V          +GA +++      I PL   +S +
Sbjct: 187 NIAALIFFI-----LAGLPIWELGLVMAVGGFMGAQLGAKVVVTKGQKWIRPLVIVMSML 241

Query: 258 IGKKYL 263
           +  K L
Sbjct: 242 MASKLL 247


>gi|118496975|ref|YP_898025.1| hypothetical protein FTN_0365 [Francisella tularensis subsp.
           novicida U112]
 gi|194324204|ref|ZP_03057978.1| domain protein of unknown function, putative [Francisella
           tularensis subsp. novicida FTE]
 gi|118422881|gb|ABK89271.1| conserved hypothetical membrane protein [Francisella novicida U112]
 gi|194321651|gb|EDX19135.1| domain protein of unknown function, putative [Francisella
           tularensis subsp. novicida FTE]
          Length = 252

 Score = 39.7 bits (91), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 11/121 (9%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD---SICMHVAMGTSLGVIAPTSVM 84
           VASF+S  L G    G GL+ VP    AF  + +     +  M +A+ T  G+      +
Sbjct: 12  VASFMSTLLGG----GAGLIAVP----AFYFIIVHTYGPNFAMQIALATCCGMSIFLGSI 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  +H + G I++  LK ++  L I  ++ S++   ++   L   FAI     GI M+  
Sbjct: 64  ATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKCINTELLKMVFAILLFGSGIWMILH 123

Query: 145 D 145
           +
Sbjct: 124 N 124


>gi|108758495|ref|YP_633117.1| hypothetical protein MXAN_4961 [Myxococcus xanthus DK 1622]
 gi|108462375|gb|ABF87560.1| putative membrane protein [Myxococcus xanthus DK 1622]
          Length = 260

 Score = 39.7 bits (91), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 14/184 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+I    L+GTL  + G+GGG+V+VP L     ++G D  +   +       V +  S
Sbjct: 3   VLLLIAVGALAGTLGAMLGIGGGIVLVPAL-----VLGFDIPVEQAIPASLMCVVASSCS 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   H+    I + +  +   V+    +   ++ + V  + +   F +F L + + ML
Sbjct: 58  AAAGYVHKHLSDIRLGLSLELATVM--GAIAGGMVAAMVAPAMVAVVFGLFTLYVALQML 115

Query: 143 -----KRDRLYCERKFPDNYVKYIWG-MVTGFLSGALGVGGGIFTNLLMLFYGASIYK-A 195
                +++    +   P NY   I G  V G LS  LGVGGG     LM +     +K A
Sbjct: 116 LLRSPRQEPAAMDDYAPANYPLGISGSFVAGGLSSLLGVGGGPLKVPLMAYGMHVPFKVA 175

Query: 196 TATS 199
           +ATS
Sbjct: 176 SATS 179


>gi|325106350|ref|YP_004276004.1| protein of unknown function DUF81 [Pedobacter saltans DSM 12145]
 gi|324975198|gb|ADY54182.1| protein of unknown function DUF81 [Pedobacter saltans DSM 12145]
          Length = 265

 Score = 39.7 bits (91), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 8/117 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G LSGL G GGG ++VP ++     MG+     +H+A+GTSL +IA  S++ F
Sbjct: 151 VIGGIIVGVLSGLIGAGGGFLIVPAIT---LFMGVP----VHLAVGTSLLIIALNSLVGF 203

Query: 87  MEHRRH-GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                H   IN   L ++     +  +V   +   ++   L   FA F + + ++++
Sbjct: 204 TGDFSHLSEINWSYLLEFSLFSSVGVLVGVYLGKKLNPKRLKSVFAWFVMAVAVVIM 260


>gi|229018872|ref|ZP_04175718.1| hypothetical protein bcere0030_33880 [Bacillus cereus AH1273]
 gi|229025113|ref|ZP_04181540.1| hypothetical protein bcere0029_34170 [Bacillus cereus AH1272]
 gi|228736223|gb|EEL86791.1| hypothetical protein bcere0029_34170 [Bacillus cereus AH1272]
 gi|228742426|gb|EEL92580.1| hypothetical protein bcere0030_33880 [Bacillus cereus AH1273]
          Length = 256

 Score = 39.7 bits (91), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G +   I         I + + S   S +  +
Sbjct: 40  IPIHVALATSLTAMAFTTLSGVVSHYREGNVVFVIGGIVGGFGAIGSFIGSKFGSLIPAN 99

Query: 125 FLN-------KAFAIFCLLMGILMLKRDR--LYCERKF-PDNYVKYI-WGMVTGFLSGAL 173
            L+          AIF  +  I+  K++R  L    +   DN +K I  G+VTG L+G+ 
Sbjct: 100 LLHWFTAGMLFLSAIFMFIRLIIFQKKERSSLKGHNELSKDNLIKCICLGLVTGMLAGSF 159

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L L++  G +I +    S G + L+  P     I  G G        LG+ 
Sbjct: 160 GIGSAPFIQLGLIVLLGLTIQQ----SIGTTMLVILP-----IAIGGG--------LGYS 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           + G +  +L + +LI    T L   IG K+      + + FSMIM
Sbjct: 203 SEGYLDYVLLVQVLI---GTMLGAYIGAKFTNYAPRMLLRFSMIM 244


>gi|163939366|ref|YP_001644250.1| hypothetical protein BcerKBAB4_1375 [Bacillus weihenstephanensis
           KBAB4]
 gi|163861563|gb|ABY42622.1| protein of unknown function DUF81 [Bacillus weihenstephanensis
           KBAB4]
          Length = 266

 Score = 39.7 bits (91), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 117/248 (47%), Gaps = 51/248 (20%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +YI L+ +   ++GT+  L G+GGG+++VP+      L+G+  S+   +A+GTS+  +  
Sbjct: 2   EYIMLLFIG-LIAGTVGSLVGLGGGIIIVPL------LIGL-HSLSPQLAVGTSMVTVVF 53

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA-----FAIFCL 135
           T + S + + +H  ++ K       +L I +    ++ S  +K FLN+      F IF +
Sbjct: 54  TGLASTLTYMKHKRVDYK----SGLILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLI 108

Query: 136 LMGILMLKRDRL---------YCERKFPDN-----------YVKYIWGMVTGFLSGALGV 175
            + IL++ RD+L           +R F DN           ++      + GF+SG  G+
Sbjct: 109 FVSILLILRDKLKPLSLSNMTVIKRSFTDNEGNTVDYQFPPFLAIFIAFIVGFISGLFGI 168

Query: 176 GGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           GGG +    +ML +    + A ATS  +  L A  + L  I            SLG V+ 
Sbjct: 169 GGGALLVPAMMLLFAFPAHIAVATSMFIVFLSAIVSSLTHI------------SLGNVSW 216

Query: 235 GAVLIILP 242
              LI++P
Sbjct: 217 AYALILIP 224



 Score = 38.9 bits (89), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 10/85 (11%)

Query: 15  SKDCVVDYIC---LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
           ++   VDY     L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+
Sbjct: 138 NEGNTVDYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAV 190

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTIN 96
            TS+ ++  ++++S + H   G ++
Sbjct: 191 ATSMFIVFLSAIVSSLTHISLGNVS 215


>gi|116495344|ref|YP_807078.1| permease [Lactobacillus casei ATCC 334]
 gi|239629797|ref|ZP_04672828.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301066916|ref|YP_003788939.1| putative permease [Lactobacillus casei str. Zhang]
 gi|116105494|gb|ABJ70636.1| Predicted permease [Lactobacillus casei ATCC 334]
 gi|239527409|gb|EEQ66410.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300439323|gb|ADK19089.1| Predicted permease [Lactobacillus casei str. Zhang]
          Length = 245

 Score = 39.7 bits (91), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 5/134 (3%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A  TSL    P   +    H R G +      + +      T++ SL   H+ +   + A
Sbjct: 42  AAATSLFTAIPALAVGCYSHYRTGNMRFHAGNEILMTAVPATIIGSLAAPHIPEVVYSWA 101

Query: 130 FAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG--IFTNLLML 186
            A+  +++G+ ML++      ++     +  Y+ G ++G + G  G+ GG  I   L+++
Sbjct: 102 IAVIFVVLGVQMLRQSFARKVKKATQPAWFAYVLGAISGLMVGVAGLSGGGPIMAGLMLM 161

Query: 187 FYGASIYKATATSA 200
             G  +  A ATS+
Sbjct: 162 --GLDMPHAAATSS 173


>gi|191638860|ref|YP_001988026.1| Predicted permease [Lactobacillus casei BL23]
 gi|190713162|emb|CAQ67168.1| Predicted permease [Lactobacillus casei BL23]
 gi|327382908|gb|AEA54384.1| Hypothetical membrane protein, conserved, DUF81 family
           [Lactobacillus casei LC2W]
 gi|327386092|gb|AEA57566.1| Hypothetical membrane protein, conserved, DUF81 family
           [Lactobacillus casei BD-II]
          Length = 245

 Score = 39.7 bits (91), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 5/134 (3%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A  TSL    P   +    H R G +      + +      T++ SL   H+ +   + A
Sbjct: 42  AAATSLFTAIPALAVGCYSHYRTGNMRFHAGNEILMTAVPATIIGSLAAPHIPEVVYSWA 101

Query: 130 FAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG--IFTNLLML 186
            A+  +++G+ ML++      ++     +  Y+ G ++G + G  G+ GG  I   L+++
Sbjct: 102 IAVIFVVLGVQMLRQSFARKVKKATQPAWFAYVLGAISGLMVGVAGLSGGGPIMAGLMLM 161

Query: 187 FYGASIYKATATSA 200
             G  +  A ATS+
Sbjct: 162 --GLDMPHAAATSS 173


>gi|77460521|ref|YP_350028.1| hypothetical protein Pfl01_4300 [Pseudomonas fluorescens Pf0-1]
 gi|77384524|gb|ABA76037.1| consevred hypothetical membrane protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 271

 Score = 39.3 bits (90), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 21/209 (10%)

Query: 60  GIDDSI---CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL----PITTV 112
           G DD I    MH+A+ TS  V+   ++++  +HRR G     +++D+++ L     +  V
Sbjct: 41  GADDPISQSAMHIAVATSTCVMIVNALVATGKHRRAG----NLIRDYLWPLGGFIGMGAV 96

Query: 113 VTSLMISHVDKSFLNKAFAIF-------CLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
           V ++    V    +  AF  +       CLL    + + +     R           G+ 
Sbjct: 97  VGAIAAVWVSGEVIRYAFIAYLGVTIVDCLLRRGFLTQSEGAIPRRL--GTLETSGGGVG 154

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY-SGWGLNGL 224
            G ++  LGVGG + T  L+   G S+ +AT+ +  +S  +A    L  +  +G      
Sbjct: 155 IGTIATFLGVGGSVMTVPLLRRCGLSMSQATSMANPLSVPVALAGTLTYMAMAGLSETKF 214

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATK 253
            PW +G+V++ A  ++   S+L   LAT+
Sbjct: 215 GPWFIGYVDLLAFAVLTLGSMLGIRLATR 243


>gi|162149595|ref|YP_001604056.1| hypothetical protein GDI_3834 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209544826|ref|YP_002277055.1| hypothetical protein Gdia_2702 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161788172|emb|CAP57777.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209532503|gb|ACI52440.1| protein of unknown function DUF81 [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 271

 Score = 39.3 bits (90), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 24/144 (16%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           GL G GG ++ VP++     L+G+ D+   HVA+GTS   +A  ++     H R  T+  
Sbjct: 21  GLVGGGGSILAVPLM---VYLVGLRDA---HVAIGTSAAAVAVNALAGLASHARAHTVRW 74

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNK----AFAIFCLLMGILMLK-RD-----RL 147
           +       V     V+ +L+ +H  K    +    AFA+  + +G+LML+ RD       
Sbjct: 75  RCAA----VFAAAGVLGALLGAHAGKIVGGQRLLLAFAVLMVGVGVLMLRGRDGAGDPDA 130

Query: 148 YCERKFPDNYVKYIW-GMVTGFLS 170
            C R   DN  +    G+ TG LS
Sbjct: 131 TCTR---DNAGRIAGTGLATGLLS 151


>gi|83747354|ref|ZP_00944394.1| Putative permease [Ralstonia solanacearum UW551]
 gi|207739634|ref|YP_002258027.1| permease protein [Ralstonia solanacearum IPO1609]
 gi|83725941|gb|EAP73079.1| Putative permease [Ralstonia solanacearum UW551]
 gi|206593014|emb|CAQ59920.1| permease protein [Ralstonia solanacearum IPO1609]
          Length = 264

 Score = 39.3 bits (90), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 23/186 (12%)

Query: 58  LMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM 117
           L G+D     H+A GT+L +IAP  ++ F  + +H  + ++ +        ++T V +  
Sbjct: 41  LYGMDQ----HLAQGTALVMIAPNVLIGFWRYHQHHPVPLRSVATLCACAMVSTYVAARF 96

Query: 118 ISHVDKSFLNKAFAIFCLLMGILMLK--RDR------------LYCERKFPDNYVKYIWG 163
            + +D + L  AFA F + + +      RD+                 +     V  + G
Sbjct: 97  AAGLDAAHLRTAFAWFLIALAVYFASQLRDKAHPDPAAAHPAPAPGAARAMPPAVLLLLG 156

Query: 164 MVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGV---SALIAFPALLVRIYSGW 219
           + +G +SG   VGGG +    L+  +G S  +A   +  +    +LIA  A     +  W
Sbjct: 157 IASGGMSGIFTVGGGLVVVPALVTLFGMSQTRAQGMALALVVPGSLIALAAYAHAGHVSW 216

Query: 220 GLNGLP 225
           G  G+P
Sbjct: 217 G-TGIP 221


>gi|332797239|ref|YP_004458739.1| sulfite exporter TauE/SafE [Acidianus hospitalis W1]
 gi|332694974|gb|AEE94441.1| sulphite exporter TauE/SafE [Acidianus hospitalis W1]
          Length = 251

 Score = 39.3 bits (90), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 25/189 (13%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L+I+     G L+G+ G  G L++VP LS           +    A+G+SL V   T+
Sbjct: 4   IWLLIIIGIAVGALTGITGSSGVLIVVPALSYL--------GLSFQDAIGSSLLVDVITT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-----DKSFLNKAFAIFCLLM 137
           +     + RHG +++KI      +L +  V+ + + S +     D++ L   F +F   M
Sbjct: 56  LSVIFVYFRHGNVDLKIS----LILGLGAVMGAQVGSAIAFVVPDRA-LESVFVVFTAYM 110

Query: 138 GILMLKRDR---LYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGI-FTNLLMLFYGA 190
             +  KR R   L  +R   +     +      + G ++G LG  GGI F  ++ML +  
Sbjct: 111 AYVSFKRSRNPKLNIKRLNLRTASYVIAPTLAFLIGTVTGTLGASGGIMFIAVMMLLFSI 170

Query: 191 SIYKATATS 199
            + +   T+
Sbjct: 171 DVKRMIGTA 179


>gi|309385844|gb|ADO66771.1| protein of unknown function DUF81 [Enterococcus faecium]
          Length = 247

 Score = 39.3 bits (90), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 109/254 (42%), Gaps = 34/254 (13%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++ T+  + G+GGG+++ P+           D I  H     S         MS +   R
Sbjct: 1   MANTVGAVSGMGGGVLIKPIF----------DFIGAHSVAAISFYSTVAVFTMSLVSTAR 50

Query: 92  HGTINMKILKDWIFVLPITT------VVTSLMISHVDKSFLNK-AFAIFCLLMGILMLKR 144
                 KI   W  VL ++       ++ ++   H+   F N+    +  + + ++ L  
Sbjct: 51  QLASGRKI--HWQIVLWVSGGAVLGGILGNVAFDHLLLLFQNEDEVQMIQIFLTVVTLLF 108

Query: 145 DRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATAT 198
              Y +  +P     +N+     G+V GFL+  LG+GGG I  +LLML +   I +AT  
Sbjct: 109 AFFYTKYDWPGFQLKNNFWYCFCGLVLGFLASLLGIGGGPINVSLLMLMFALPIKEATV- 167

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
               S    F + L +I +  G  G      G  ++  +  ++P +I+   L  K+S ++
Sbjct: 168 ---YSICTIFFSQLAKIVTIAGTTG-----FGLYDLKILWFVIPAAIVGGLLGAKVSTVL 219

Query: 259 GKKYLTIGFSMIMF 272
             + +T+ F  ++F
Sbjct: 220 SPQKVTLVFQTVIF 233


>gi|229140306|ref|ZP_04268861.1| hypothetical protein bcere0013_34050 [Bacillus cereus BDRD-ST26]
 gi|229197787|ref|ZP_04324506.1| hypothetical protein bcere0001_33250 [Bacillus cereus m1293]
 gi|228585732|gb|EEK43831.1| hypothetical protein bcere0001_33250 [Bacillus cereus m1293]
 gi|228642867|gb|EEK99143.1| hypothetical protein bcere0013_34050 [Bacillus cereus BDRD-ST26]
          Length = 272

 Score = 39.3 bits (90), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 48/230 (20%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI---------LKDWIFVLPITTVVTS 115
           I +HVA+ TSL  +A T++   + H R G + + I         L  +     I + + S
Sbjct: 56  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGALGSY-----IGSKIGS 110

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILMLK----RDRLYCERK--FPDNYVKYI-WGMVTGF 168
           L+  H+   F      +  + M I ++K     + L  E K    +N +K I  G+VTG 
Sbjct: 111 LIPGHLLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGM 170

Query: 169 LSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           ++G+ G+G   F  L LM+  G +I +    S G + L+  P     I  G G       
Sbjct: 171 MAGSFGIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----IAIGGG------- 214

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
            LG+ + G +  IL + +LI    T L   IG K+      + + FSMIM
Sbjct: 215 -LGYSSEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRMLLKFSMIM 260


>gi|242242213|ref|ZP_04796658.1| hypothetical membrane protein [Staphylococcus epidermidis W23144]
 gi|242234332|gb|EES36644.1| hypothetical membrane protein [Staphylococcus epidermidis W23144]
 gi|319401800|gb|EFV90008.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
          Length = 275

 Score = 39.3 bits (90), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 7/62 (11%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS + H   G
Sbjct: 169 GILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSIGHILQG 221

Query: 94  TI 95
            +
Sbjct: 222 HV 223


>gi|73663161|ref|YP_301942.1| permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
 gi|72495676|dbj|BAE18997.1| putative permease [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 274

 Score = 39.3 bits (90), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA+   G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SV+S  
Sbjct: 162 VATLFIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVVSSA 214

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 215 GHIVQGHV 222



 Score = 38.9 bits (89), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 40/190 (21%), Positives = 92/190 (48%), Gaps = 28/190 (14%)

Query: 59  MGIDDS----ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           +G+D+     I   +A+GTS  ++  T + S + + +   +++K    ++F L   +++ 
Sbjct: 36  LGVDNDLLHGITPQIAIGTSSVILIVTGLSSTLGYLKTKQVDVKNGSIFLFGLLPGSLIG 95

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL---------YCERKFPDNY-------- 157
           S++  ++     N  F IF +L+ IL++ R+++           E+ + D +        
Sbjct: 96  SIISRYLTLESFNLYFGIFLILVAILLMVRNKIKPLKVFAKPQYEKTYVDGHGETYHYHV 155

Query: 158 ---VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGV---SALIAFPA 210
              V ++  +  G L+G  G+GGG + T L+++ +    + A  TS  +   S++++   
Sbjct: 156 PPLVAFVATLFIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSVVSSAG 215

Query: 211 LLVRIYSGWG 220
            +V+ +  WG
Sbjct: 216 HIVQGHVAWG 225


>gi|226314422|ref|YP_002774318.1| hypothetical protein BBR47_48370 [Brevibacillus brevis NBRC 100599]
 gi|226097372|dbj|BAH45814.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
           100599]
          Length = 274

 Score = 39.3 bits (90), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 26/197 (13%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L ++   ++G +  + G+GGG+  VP L   F       S+   VA  TSL VIA T++ 
Sbjct: 8   LFVIIGVVAGVIGSIAGLGGGIFFVPALLY-FANWYTPGSMNPQVAAATSLIVIAVTALS 66

Query: 85  SFMEHRRHGTINMK-ILKDWIFVLP--ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S + + +   ++ +  L  +I   P  I  V  + +++    S L   F +F L M +++
Sbjct: 67  SSLSYLKQKKVDKQSALLFFIGSAPGAIVGVYLNTLLAVEGFSLL---FGLFQLCMFVVL 123

Query: 142 LKRDRL-------YCERKFPDN------YVKYIWGMVT-----GFLSGALGVGGGIF-TN 182
           + +D++         +R F DN      Y    W ++T     G  S   GVGGGI    
Sbjct: 124 MVKDKIKPRSIKWEVQRHFVDNEGNEYVYGYSKWSVITIAFFVGITSSLFGVGGGILMVP 183

Query: 183 LLMLFYGASIYKATATS 199
            +M+ +    + ATATS
Sbjct: 184 AMMILFRFPPHIATATS 200


>gi|327311959|ref|YP_004338856.1| hypothetical protein TUZN_2087 [Thermoproteus uzoniensis 768-20]
 gi|326948438|gb|AEA13544.1| hypothetical protein TUZN_2087 [Thermoproteus uzoniensis 768-20]
          Length = 274

 Score = 39.3 bits (90), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F+ G LSG FG+GGG ++VP L            +C+  A+GTSL  +    V +  E+ 
Sbjct: 165 FVVGLLSGYFGIGGGFLIVPSLM-------FSAGLCITRAIGTSLLSVGTFGVAAGAEYW 217

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +G +   +   ++        + + +     K  L KA+    + +GI ML R
Sbjct: 218 YYGNVIPLVALLYVLGGIGGGYLGTSLAVKAPKDALRKAYGAIIVAVGIYMLYR 271


>gi|329765383|ref|ZP_08256963.1| hypothetical protein Nlim_0726 [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329138289|gb|EGG42545.1| hypothetical protein Nlim_0726 [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 258

 Score = 39.3 bits (90), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 13/185 (7%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++D + LI +  F +G L  + G+GGG+V+VPVL+      G   ++    A   SL   
Sbjct: 2   IIDQLWLIPLG-FAAGVLGSMIGLGGGIVVVPVLT----FFGFPPTL----AASNSLFAA 52

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              ++ S   + R   I   +      +    T++ +L+ S V        F +  +   
Sbjct: 53  FSNAIGSTFSYSRQKRIEYSLGLKLGLLSIPGTILGALLSSDVTPGIFKILFGLVLISSA 112

Query: 139 ILMLKRDRLYC-ERKFPDNYVKYIWG--MVTGFLSGALGVGGG-IFTNLLMLFYGASIYK 194
           I +  R ++   E+K     + +  G     G +S   G+GGG IF  L+++  G ++ K
Sbjct: 113 IYIFLRKKIETREKKLTKQMIIFAIGASFFAGIVSSFFGIGGGTIFVPLMVVGIGMTMKK 172

Query: 195 ATATS 199
           A  TS
Sbjct: 173 AAPTS 177


>gi|319775932|ref|YP_004138420.1| inner membrane protein [Haemophilus influenzae F3047]
 gi|329123793|ref|ZP_08252351.1| inner membrane protein YfcA [Haemophilus aegyptius ATCC 11116]
 gi|317450523|emb|CBY86740.1| conserved inner membrane protein [Haemophilus influenzae F3047]
 gi|327469280|gb|EGF14751.1| inner membrane protein YfcA [Haemophilus aegyptius ATCC 11116]
          Length = 255

 Score = 39.3 bits (90), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 45/267 (16%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV----AMG 72
           D  +D + ++    F++  +  + G GGGL+ +P    A  + G+  ++ +      AMG
Sbjct: 2   DIGIDLLAILFCVGFVASFIDAIAG-GGGLITIP----ALLMTGMPPAMALGTNKLQAMG 56

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            +L     ++ + F+  R     ++  +  W+F   + + + +L+I  +D +   K    
Sbjct: 57  GAL-----SASLYFLRKRAVNLRDIWFILIWVF---LGSALGTLLIQSIDVAIFKKMLPF 108

Query: 133 FCLLMGILMLKRDRLYCE-RKFPDNYVKYIWGMVT----GFLSGALGVG-GGIFTNLLML 186
             L +G+  L   +L  E RK   +Y+  ++G++     GF  G  G G G I +   + 
Sbjct: 109 LILAIGLYFLFTPKLGDEDRKQRLSYM--LFGLLVSPFLGFYDGFFGPGTGSIMSLACVT 166

Query: 187 FYGASIYKATATSAGV---SALIAFPALLVRIYSGWGLNGLPPWSLGFV---------NI 234
             G ++ KATA +  +   S L +F   L        L G   W +GFV         N+
Sbjct: 167 LLGFNLPKATAHAKVMNFTSNLASFALFL--------LGGQILWKVGFVMMAGSILGANL 218

Query: 235 GAVLIILPISILITPLATKLSYMIGKK 261
           GA +++     LI P+   +S+M+  K
Sbjct: 219 GAKMVMTKGKTLIRPMVVIMSFMMTAK 245


>gi|304394044|ref|ZP_07375967.1| permease [Ahrensia sp. R2A130]
 gi|303293484|gb|EFL87861.1| permease [Ahrensia sp. R2A130]
          Length = 329

 Score = 39.3 bits (90), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 8/66 (12%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G LSG+FGVGGG +M P+L        I  +I   VA+ T    I  +S    + H R G
Sbjct: 48  GFLSGMFGVGGGFLMTPLL--------IFYNIPPAVAVATEANQIVASSFSGALAHFRRG 99

Query: 94  TINMKI 99
           T+++K+
Sbjct: 100 TVDIKL 105


>gi|288554026|ref|YP_003425961.1| hypothetical protein BpOF4_05025 [Bacillus pseudofirmus OF4]
 gi|288545186|gb|ADC49069.1| hypothetical protein BpOF4_05025 [Bacillus pseudofirmus OF4]
          Length = 274

 Score = 39.3 bits (90), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 13/78 (16%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           +F+ G LSGLFG+GGG +MVP +   F           H+A+ TS+ +I  +++ S + H
Sbjct: 162 AFVVGMLSGLFGIGGGSLMVPAMIMLFHF-------PPHMAVATSMFMILLSAITSSVSH 214

Query: 90  RRHGTINMKILKDWIFVL 107
              G +N      W++ L
Sbjct: 215 IVLGNVN------WLYAL 226


>gi|68248803|ref|YP_247915.1| hypothetical protein NTHI0295 [Haemophilus influenzae 86-028NP]
 gi|145628505|ref|ZP_01784305.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           22.1-21]
 gi|145639743|ref|ZP_01795345.1| lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase
           [Haemophilus influenzae PittII]
 gi|68057002|gb|AAX87255.1| concerved hypothetical protein [Haemophilus influenzae 86-028NP]
 gi|144978975|gb|EDJ88661.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           22.1-21]
 gi|145271111|gb|EDK11026.1| lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase
           [Haemophilus influenzae PittII]
 gi|309750385|gb|ADO80369.1| Putative permease YcfA [Haemophilus influenzae R2866]
          Length = 255

 Score = 39.3 bits (90), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 45/267 (16%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV----AMG 72
           D  +D + ++    F++  +  + G GGGL+ +P    A  + G+  ++ +      AMG
Sbjct: 2   DIGIDLLAILFCVGFVASFIDAIAG-GGGLITIP----ALLMTGMPPAMALGTNKLQAMG 56

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            +L     ++ + F+  R     ++  +  W+F   + + + +L+I  +D +   K    
Sbjct: 57  GAL-----SASLYFLRKRAVNLRDIWFILIWVF---LGSALGTLLIQSIDVAIFKKMLPF 108

Query: 133 FCLLMGILMLKRDRLYCE-RKFPDNYVKYIWGMVT----GFLSGALGVG-GGIFTNLLML 186
             L +G+  L   +L  E RK   +Y+  ++G++     GF  G  G G G I +   + 
Sbjct: 109 LILAIGLYFLFTPKLGDEDRKQRLSYM--LFGLLVSPFLGFYDGFFGPGTGSIMSLACVT 166

Query: 187 FYGASIYKATATSAGV---SALIAFPALLVRIYSGWGLNGLPPWSLGFV---------NI 234
             G ++ KATA +  +   S L +F   L        L G   W +GFV         N+
Sbjct: 167 LLGFNLPKATAHAKVMNFTSNLASFALFL--------LGGQILWKVGFVMMAGSILGANL 218

Query: 235 GAVLIILPISILITPLATKLSYMIGKK 261
           GA +++     LI P+   +S+M+  K
Sbjct: 219 GAKMVMTKGKTLIRPMVVIMSFMMTAK 245


>gi|301168001|emb|CBW27587.1| putative integral membrane protein [Bacteriovorax marinus SJ]
          Length = 273

 Score = 39.3 bits (90), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 14/161 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +IV     G LS  FGVGGG+++VP L   F  +         V + TSL +I   S  +
Sbjct: 6   LIVTGIFVGLLSTFFGVGGGILIVPTLYTFFSFL------PAQVVIATSLTLIFFNSTRN 59

Query: 86  FMEHRRHGTI-NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-MLK 143
                + G   N K +      + I  +V   +   +D   +   F+IF  ++ I  +  
Sbjct: 60  TYNFTKAGVKPNFKFVAPIALAMLIGVIVGGRLALILDAKTIKLIFSIFVFIIAIRNIFN 119

Query: 144 RDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVGGG 178
           ++++     +   +      +  + G+V G +SG  G+GGG
Sbjct: 120 KNKVADHNNWSPKFTFKTISLGTLTGLVGGLISGLTGLGGG 160


>gi|148557278|ref|YP_001264860.1| hypothetical protein Swit_4384 [Sphingomonas wittichii RW1]
 gi|148502468|gb|ABQ70722.1| protein of unknown function DUF81 [Sphingomonas wittichii RW1]
          Length = 264

 Score = 39.3 bits (90), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 14/137 (10%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A  L GT+ G+ GVGGG +M P+L   F        +    A+GT L   A T  +  + 
Sbjct: 11  AGLLVGTIVGMTGVGGGSLMSPILILLF-------GVAPATAVGTDLWFAAATKTVGSIV 63

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK----- 143
           H R  + + +I+  W+ +  I   V +L++         K+  I  LL G+L++      
Sbjct: 64  HHRQNSADHRIV-GWLCLGSIPAAVLTLVLLFEFGGHQEKSGFIVTLLGGMLIITSFATL 122

Query: 144 -RDRLYCERKFPDNYVK 159
            R RL       D+ VK
Sbjct: 123 FRRRLVHAMIDTDDEVK 139


>gi|304407220|ref|ZP_07388873.1| protein of unknown function DUF81 [Paenibacillus curdlanolyticus
           YK9]
 gi|304343661|gb|EFM09502.1| protein of unknown function DUF81 [Paenibacillus curdlanolyticus
           YK9]
          Length = 261

 Score = 39.3 bits (90), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 15/160 (9%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
           +SG+ G+GG ++  P+L      +G        V+  +++ V   T +     +R+ G I
Sbjct: 21  ISGMVGIGGSIIKYPMLLYIPPALGFVAFTAQEVSAVSAVQVFFAT-IAGVFAYRKSGLI 79

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDK----SFLNKAFAIFCLLMGILML-----KRDR 146
           N K+    +  + I  V+ S +  +  K    S +N  +A+  L+  I+M        + 
Sbjct: 80  NRKL----VLYMGIPIVIGSFIGGYGSKFLPDSAINLTYAVLALIAAIMMFMPKKGAENG 135

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
            Y E KF +  +  +   + G LSG +G  G   T  +ML
Sbjct: 136 EYAELKF-NRLIASLTAAIVGILSGVVGAAGAFITVPIML 174


>gi|218896481|ref|YP_002444892.1| hypothetical protein BCG9842_B3838 [Bacillus cereus G9842]
 gi|218541679|gb|ACK94073.1| putative membrane protein [Bacillus cereus G9842]
          Length = 266

 Score = 39.3 bits (90), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 39/205 (19%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +YI L+ +   ++GT+  L G+GGG+++VP+      L+G+  S+   +A+GTS+  +  
Sbjct: 2   EYIMLLFIG-LIAGTVGSLVGLGGGIIIVPL------LIGL-HSLSPQLAVGTSMVTVVF 53

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA-----FAIFCL 135
           T + S + + +H  ++ K       +L I +    ++ S  +K FLN+      F IF +
Sbjct: 54  TGLSSTLTYMKHKRVDYK----SGLILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLI 108

Query: 136 LMGILMLKRDRL---------YCERKFPDN-----------YVKYIWGMVTGFLSGALGV 175
            + IL++ RD+L           +R F DN           ++      + GF+SG  G+
Sbjct: 109 FVSILLMLRDKLKPLSLSNTSVIKRSFTDNDGNAVHYQFPPFLAIFIAFIVGFISGLFGI 168

Query: 176 GGG-IFTNLLMLFYGASIYKATATS 199
           GGG +    +ML +    + A ATS
Sbjct: 169 GGGALLVPAMMLLFAFPAHIAVATS 193



 Score = 38.1 bits (87), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 151 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 203

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 204 SSATHISLGNVS------WIYAL 220


>gi|145635634|ref|ZP_01791331.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           PittAA]
 gi|145267107|gb|EDK07114.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           PittAA]
          Length = 255

 Score = 39.3 bits (90), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 120/267 (44%), Gaps = 45/267 (16%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV----AMG 72
           D  +D + ++    F++  +  + G GGGL+ +P    A  + G+  ++ +      AMG
Sbjct: 2   DIGIDLLAILFCVGFVASFIDAIAG-GGGLITIP----ALLMTGMPPAMALGTNKLQAMG 56

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            +L     ++ + F+  R     ++  +  W+F   + + + +L+I  +D +   K    
Sbjct: 57  GAL-----SASLYFLRKRAVNLRDIWFILIWVF---LGSALGTLLIQSIDVAIFRKILPF 108

Query: 133 FCLLMGILMLKRDRL-YCERKFPDNYVKYIWGMVT----GFLSGALGVG-GGIFTNLLML 186
             L++G+  L   +L   +RK   +Y+  ++G++     GF  G  G G G I +   + 
Sbjct: 109 LILVIGLYFLFTPKLGDKDRKQRLSYL--LFGLLVSPFLGFYDGFFGPGTGSIMSLACVT 166

Query: 187 FYGASIYKATATSAGV---SALIAFPALLVRIYSGWGLNGLPPWSLGFV---------NI 234
             G ++ KATA +  +   S L +F   L        L G   W +GFV         N+
Sbjct: 167 LLGFNLPKATAHAKVMNFTSNLASFALFL--------LGGQILWEVGFVMMAGSILGANL 218

Query: 235 GAVLIILPISILITPLATKLSYMIGKK 261
           GA +++     LI P+   +S+M+  K
Sbjct: 219 GAKMVMTKGKTLIRPMVVIMSFMMTAK 245


>gi|229075562|ref|ZP_04208549.1| hypothetical protein bcere0024_33720 [Bacillus cereus Rock4-18]
 gi|229104207|ref|ZP_04234879.1| hypothetical protein bcere0019_33550 [Bacillus cereus Rock3-28]
 gi|228679224|gb|EEL33429.1| hypothetical protein bcere0019_33550 [Bacillus cereus Rock3-28]
 gi|228707541|gb|EEL59727.1| hypothetical protein bcere0024_33720 [Bacillus cereus Rock4-18]
          Length = 251

 Score = 39.3 bits (90), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 22/152 (14%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI---------LKDWIFVLPITTVVTS 115
           I +HVA+ TSL  +A T++   + H R G + + I         L  +     I +   S
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLMIGGIVGGFGALGSY-----IGSKFGS 89

Query: 116 LMISHVDKSFLNKAFAIFCLLMGI-LMLKRDR----LYCERKF-PDNYVKYI-WGMVTGF 168
           L+ +H+   F      +  + M I L++ R++    L  ++K   +N +K I  G+VTG 
Sbjct: 90  LIPAHLLHWFTAGMLFLSAIFMFIKLIMSRNKQKPPLCGQKKLSKNNLMKCICLGLVTGM 149

Query: 169 LSGALGVGGGIFTNL-LMLFYGASIYKATATS 199
           L+G+ G+G   F  L LM+  G +I ++  T+
Sbjct: 150 LAGSFGIGSAPFIQLGLMVLLGLTIQQSVGTT 181


>gi|300119626|ref|ZP_07057169.1| permease [Bacillus cereus SJ1]
 gi|298722995|gb|EFI63894.1| permease [Bacillus cereus SJ1]
          Length = 251

 Score = 39.3 bits (90), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 48/230 (20%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI---------LKDWIFVLPITTVVTS 115
           I +HVA+ TSL  +A T++   + H R G + + I         L  +     I + + S
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGALGSY-----IGSKIGS 89

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILMLK----RDRLYCERK--FPDNYVKYI-WGMVTGF 168
           L+  H+   F      +  + M I ++K     + L  E K    +N +K I  G+VTG 
Sbjct: 90  LIPGHLLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGM 149

Query: 169 LSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           ++G+ G+G   F  L LM+  G +I +    S G + L+  P     I  G G       
Sbjct: 150 MAGSFGIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----IAIGGG------- 193

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
            LG+ + G +  IL + +LI    T L   IG K+      + + FSMIM
Sbjct: 194 -LGYSSEGYLDHILLLQVLI---GTMLGAYIGAKFTNYAPRMLLKFSMIM 239


>gi|86147369|ref|ZP_01065682.1| hypothetical protein MED222_00902 [Vibrio sp. MED222]
 gi|85834797|gb|EAQ52942.1| hypothetical protein MED222_00902 [Vibrio sp. MED222]
          Length = 259

 Score = 39.3 bits (90), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 18/186 (9%)

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC- 149
           R+G +++K ++  IF   I + + + ++ H+D S L     +  + + +  L   +    
Sbjct: 67  RNGIVSIKEMRLAIFCTFIGSAIGAELVQHIDASLLTSVIPLLLIAISLYFLLAPQTRAS 126

Query: 150 --ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALI 206
             ++K  +       G   GF  G  G G G IFT   +     S+  ATA +  ++   
Sbjct: 127 EGKQKISEAMFALCIGGGVGFYDGFFGPGTGSIFTVCFVAIGHFSLVDATARTKILNFTS 186

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILPISILITPLATKLSYM 257
              AL+  I     L GLP W LG V          +GA +++      I PL   +S +
Sbjct: 187 NIAALIFFI-----LAGLPIWELGLVMAVGGFMGAQLGAKVVVTKGQKWIRPLVIVMSML 241

Query: 258 IGKKYL 263
           +  K L
Sbjct: 242 MASKLL 247


>gi|229114996|ref|ZP_04244408.1| hypothetical protein bcere0017_12920 [Bacillus cereus Rock1-3]
 gi|228668508|gb|EEL23938.1| hypothetical protein bcere0017_12920 [Bacillus cereus Rock1-3]
          Length = 262

 Score = 39.3 bits (90), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 38/180 (21%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+      L+G+  S+   +A+GTS+  +  T + S + + +H  ++ K       
Sbjct: 22  IIIVPL------LIGL-HSLSPQLAVGTSMVTVVFTGLASTLTYMKHKRVDYK----SGL 70

Query: 106 VLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILMLKRDRL---------YCER 151
           +L I +    ++ S  +K FLN+      F IF +L+ IL++ RD+L           +R
Sbjct: 71  ILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLILVSILLMLRDKLKPLSLSNMSVIKR 129

Query: 152 KFPDN-----------YVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            F DN           ++      + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 130 SFTDNKGNTVHYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 189



 Score = 36.6 bits (83), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 7/72 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 147 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 199

Query: 85  SFMEHRRHGTIN 96
           S   H   G ++
Sbjct: 200 SSATHISLGNVS 211


>gi|206968267|ref|ZP_03229223.1| putative membrane protein [Bacillus cereus AH1134]
 gi|218234248|ref|YP_002366233.1| hypothetical protein BCB4264_A1507 [Bacillus cereus B4264]
 gi|296502121|ref|YP_003663821.1| hypothetical protein BMB171_C1285 [Bacillus thuringiensis BMB171]
 gi|206737187|gb|EDZ54334.1| putative membrane protein [Bacillus cereus AH1134]
 gi|218162205|gb|ACK62197.1| putative membrane protein [Bacillus cereus B4264]
 gi|296323173|gb|ADH06101.1| hypothetical protein BMB171_C1285 [Bacillus thuringiensis BMB171]
 gi|326939171|gb|AEA15067.1| hypothetical protein CT43_CH1380 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 266

 Score = 39.3 bits (90), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 39/205 (19%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +YI L+ +   ++GT+  L G+GGG+++VP+      L+G+  S+   +A+GTS+  +  
Sbjct: 2   EYIMLLFIG-LIAGTVGSLVGLGGGIIIVPL------LIGL-HSLSPQLAVGTSMVTVVF 53

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA-----FAIFCL 135
           T + S + + +H  ++ K       +L I +    ++ S  +K FLN+      F IF +
Sbjct: 54  TGLSSTLTYMKHKRVDYK----SGLILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLI 108

Query: 136 LMGILMLKRDRL---------YCERKFPDN-----------YVKYIWGMVTGFLSGALGV 175
            + IL++ RD+L           +R F DN           ++      + GF+SG  G+
Sbjct: 109 FVSILLMLRDKLKPLSLSNTSVIKRSFTDNDGNTVHYQFPPFLAIFIAFIVGFISGLFGI 168

Query: 176 GGG-IFTNLLMLFYGASIYKATATS 199
           GGG +    +ML +    + A ATS
Sbjct: 169 GGGALLVPAMMLLFAFPAHIAVATS 193



 Score = 38.1 bits (87), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 151 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 203

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 204 SSATHISLGNVS------WIYAL 220


>gi|323136515|ref|ZP_08071597.1| protein of unknown function DUF81 [Methylocystis sp. ATCC 49242]
 gi|322398589|gb|EFY01109.1| protein of unknown function DUF81 [Methylocystis sp. ATCC 49242]
          Length = 267

 Score = 39.3 bits (90), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 8/149 (5%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D +  +  L  ++ F+ G L G  GVGGG +M P+L   F        I    A+GT L 
Sbjct: 6   DALHTFNPLYSLSGFVVGALVGFTGVGGGALMTPILMLFF-------GIAPATAVGTDLL 58

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             A T     + H  +GT++ +I +   +     T+VT L ++ + KS  + A  +    
Sbjct: 59  YAAITKSNGTLVHALNGTVDWRITRRLAYGSIPATIVTLLTLAWMGKSAGHAANGLITSA 118

Query: 137 MGI-LMLKRDRLYCERKFPDNYVKYIWGM 164
           +G  L+L    +   R   D+  ++  G+
Sbjct: 119 LGFALLLTAVAILFRRWILDHIARHTDGL 147


>gi|253997285|ref|YP_003049349.1| hypothetical protein Mmol_1919 [Methylotenera mobilis JLW8]
 gi|253983964|gb|ACT48822.1| protein of unknown function DUF81 [Methylotenera mobilis JLW8]
          Length = 343

 Score = 39.3 bits (90), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 93/193 (48%), Gaps = 16/193 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I +A+ L+ ++S + G G GL+++P+L  A     I  ++    ++GTS+  +   S+  
Sbjct: 6   IFIAALLAFSISVICGGGAGLLLIPILGYALPASQIPAAL----SIGTSVNSVTKLSLF- 60

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
                 +  IN  I++ ++        + + ++S++D +++    AIF L+  +  L R 
Sbjct: 61  ------YSKINWHIVRLFLPAALPGVALGAWLLSYLDPTYVELCMAIF-LVSNLPYLFRK 113

Query: 146 RLYCERK--FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
                 K  + + +++ I G++ GF+SG  G  G +F N + L YG    +  AT A   
Sbjct: 114 ETVANAKPNYSNQFLRAI-GLLAGFISGLTGAVGVLF-NGVYLRYGLVKTEIVATRAANE 171

Query: 204 ALIAFPALLVRIY 216
            L+    L +  Y
Sbjct: 172 ILLHIIKLFLYAY 184


>gi|42782758|ref|NP_980005.1| hypothetical protein BCE_3708 [Bacillus cereus ATCC 10987]
 gi|42738684|gb|AAS42613.1| membrane protein, putative [Bacillus cereus ATCC 10987]
          Length = 251

 Score = 39.3 bits (90), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 48/230 (20%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI---------LKDWIFVLPITTVVTS 115
           I +HVA+ TSL  +A T++   + H R G + + I         L  +     I + + S
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGALGSY-----IGSKIGS 89

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILMLK----RDRLYCERK--FPDNYVKYI-WGMVTGF 168
           L+  H+   F      +  + M I ++K     + L  E K    +N +K I  G+VTG 
Sbjct: 90  LIPGHLLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGM 149

Query: 169 LSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           ++G+ G+G   F  L LM   G +I +    S G + L+  P     I  G G       
Sbjct: 150 MAGSFGIGSAPFIQLGLMFLLGLTIQQ----SVGTTMLVILP-----IAIGGG------- 193

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
            LG+ + G +  IL + +LI    T L   IG K+      + + FSMIM
Sbjct: 194 -LGYSSEGYLDHILLLQVLI---GTMLGAYIGAKFTNYAPSMLLKFSMIM 239


>gi|145589661|ref|YP_001156258.1| hypothetical protein Pnuc_1480 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048067|gb|ABP34694.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 264

 Score = 39.3 bits (90), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 16/136 (11%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I++  L G L G+ GVGGG +M P+L+  F        +    A+GT L   A T     
Sbjct: 12  IISGALVGLLVGMTGVGGGSLMTPLLTIIF-------GVAPTTAVGTDLAFAAITKGFGT 64

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLM----ISHVDKSF---LNKAFAIFCLLMGI 139
           + HR HG +   I++  + +  +TT V S++    +  V KSF   ++ +  +  LL   
Sbjct: 65  VAHRLHGNVRWDIVR-LLCIGSLTTAVLSILVLKFVGPVSKSFNHLISLSIGVSVLLTAF 123

Query: 140 LMLKRDR-LYCERKFP 154
            +L R + L+  ++ P
Sbjct: 124 SLLFRGKILHWVQQNP 139


>gi|27467533|ref|NP_764170.1| hypothetical protein SE0615 [Staphylococcus epidermidis ATCC 12228]
 gi|293368299|ref|ZP_06614927.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|27315077|gb|AAO04212.1|AE016746_2 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|291317546|gb|EFE57964.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329726803|gb|EGG63263.1| putative membrane protein [Staphylococcus epidermidis VCU144]
 gi|329737583|gb|EGG73829.1| putative membrane protein [Staphylococcus epidermidis VCU045]
          Length = 275

 Score = 38.9 bits (89), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 7/62 (11%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS + H   G
Sbjct: 169 GLLTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSIGHIFQG 221

Query: 94  TI 95
            +
Sbjct: 222 HV 223


>gi|84393223|ref|ZP_00991985.1| hypothetical protein V12B01_08487 [Vibrio splendidus 12B01]
 gi|84376129|gb|EAP93015.1| hypothetical protein V12B01_08487 [Vibrio splendidus 12B01]
          Length = 259

 Score = 38.9 bits (89), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 18/186 (9%)

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC- 149
           R+G +++K ++  IF   I + + + ++ H+D S L     +  + + +  L   +    
Sbjct: 67  RNGIVSIKEMRLAIFCTFIGSAIGAELVQHIDASLLTSMIPLLLIAISLYFLLAPQTRAS 126

Query: 150 --ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALI 206
             ++K  +       G   GF  G  G G G IFT   +     S+  ATA +  ++   
Sbjct: 127 EGKQKMSEAVFALCIGGGVGFYDGFFGPGTGSIFTVCFVAIGHFSLVDATARTKVLNFTS 186

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILPISILITPLATKLSYM 257
              AL+  I     L GLP W LG V          +GA +++      I PL   +S +
Sbjct: 187 NIAALIFFI-----LAGLPIWELGLVMAVGGFMGAQLGAKVVVTKGQKWIRPLVIVMSML 241

Query: 258 IGKKYL 263
           +  K L
Sbjct: 242 MASKLL 247


>gi|251810296|ref|ZP_04824769.1| hypothetical membrane protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|251806178|gb|EES58835.1| hypothetical membrane protein [Staphylococcus epidermidis
           BCM-HMP0060]
          Length = 275

 Score = 38.9 bits (89), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 7/68 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +   G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS +
Sbjct: 163 ITTLFIGLLTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSI 215

Query: 88  EHRRHGTI 95
            H   G +
Sbjct: 216 GHIFQGHV 223


>gi|241668519|ref|ZP_04756097.1| hypothetical protein FphipA2_07121 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254877053|ref|ZP_05249763.1| predicted protein [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254843074|gb|EET21488.1| predicted protein [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 270

 Score = 38.9 bits (89), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 11/205 (5%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
            S  MHVA+ TSL V+  TS ++   H +   I  ++     F + I  ++ ++  S + 
Sbjct: 46  SSNAMHVAIATSLFVMIFTSSITTYSHHKSNNIIWEVAIPLKFGVIIGAILGAIFASFLP 105

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRLYCERK---------FPDNYVKYIWGMVTGFLSGAL 173
            + L   F IF  L+  ++    + + ++           P   +  I+G  TG ++  L
Sbjct: 106 GNILKIFFIIF--LIYTIVKWAIKSFAKKSTNNNNANRLNPKKIISVIYGGFTGAIAVLL 163

Query: 174 GVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           G+G  +     +     ++ +A A +A V+  IA       I +G   + LP + LG+V 
Sbjct: 164 GIGASVMIVPFLKHKNFTMGQAAAIAAAVTPFIALLGASTYIITGLSESALPKFCLGYVY 223

Query: 234 IGAVLIILPISILITPLATKLSYMI 258
           I A + ++  S+L  P+ T+LS +I
Sbjct: 224 IPAAIGMIFGSLLGAPIGTRLSSVI 248


>gi|325576677|ref|ZP_08147364.1| membrane protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325161124|gb|EGC73240.1| membrane protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 264

 Score = 38.9 bits (89), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 9/162 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I ++I+   ++  +S +FG+GGG++MVP+L   F          + +   TSL ++ 
Sbjct: 3   LQLIFILILCGVMTNIMSAIFGIGGGVLMVPILYTLF------PQFPLQMIAATSLTIVM 56

Query: 80  PTSVMSFME-HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            +S ++ +  +++  +IN K +  W   + I   +      +V    +   F I   L+ 
Sbjct: 57  GSSFINLIYFYKQKVSINYKAMLIWSVGMIIGVQLGFESSFYVPDIAIISVFVITLSLLA 116

Query: 139 I-LMLKRDRLYCERKFPDNYVKYI-WGMVTGFLSGALGVGGG 178
           I  +  ++    ++   D  +K I    + GF++G  G+GGG
Sbjct: 117 IRTIFSKETAIIQQSTADETIKGIGLSTIGGFIAGMTGIGGG 158


>gi|57866438|ref|YP_188101.1| hypothetical protein SERP0509 [Staphylococcus epidermidis RP62A]
 gi|282875582|ref|ZP_06284453.1| putative membrane protein [Staphylococcus epidermidis SK135]
 gi|57637096|gb|AAW53884.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
 gi|281295609|gb|EFA88132.1| putative membrane protein [Staphylococcus epidermidis SK135]
 gi|329736846|gb|EGG73111.1| putative membrane protein [Staphylococcus epidermidis VCU028]
          Length = 275

 Score = 38.9 bits (89), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 7/62 (11%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS + H   G
Sbjct: 169 GLLTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSSIGHIFQG 221

Query: 94  TI 95
            +
Sbjct: 222 HV 223


>gi|309779111|ref|ZP_07673878.1| membrane protein [Ralstonia sp. 5_7_47FAA]
 gi|308922176|gb|EFP67806.1| membrane protein [Ralstonia sp. 5_7_47FAA]
          Length = 260

 Score = 38.9 bits (89), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 22/192 (11%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME-HRRHGTINMKILKDWIF 105
           + +PVL     L G+D     H+A GT+L +IAP  ++ F   H+RH      +    +F
Sbjct: 33  IAIPVLGY---LYGMDQ----HLAQGTALVMIAPNVLIGFWRYHQRHPVHLRSVALICVF 85

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR--------DRLYCERKFPDNY 157
            +   T V +   + +D   L+ AFA+F +++ +    +        D  +   +     
Sbjct: 86  SMA-ATYVAARFAAGLDAHLLHTAFAVFLIVLALYFASQLKEKPHAGDTAHAAPRAMPAA 144

Query: 158 VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
              + G+ +G +SG   VGGG +    L+ F+G    +A   +  +    +  AL    +
Sbjct: 145 ALPLMGVASGAMSGIFTVGGGLVVVPALVTFFGMPQTRAQGMALALVVPGSLIALATYAH 204

Query: 217 SG---WGLNGLP 225
           +G   WG  G+P
Sbjct: 205 AGHVDWG-TGIP 215


>gi|199598453|ref|ZP_03211871.1| Predicted permease [Lactobacillus rhamnosus HN001]
 gi|258508929|ref|YP_003171680.1| permease [Lactobacillus rhamnosus GG]
 gi|199590637|gb|EDY98725.1| Predicted permease [Lactobacillus rhamnosus HN001]
 gi|257148856|emb|CAR87829.1| Conserved permease [Lactobacillus rhamnosus GG]
 gi|259650222|dbj|BAI42384.1| putative transporter protein [Lactobacillus rhamnosus GG]
          Length = 245

 Score = 38.9 bits (89), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 5/134 (3%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A  TSL    P   +    H R G +        +      TVV SL   ++ +   + A
Sbjct: 42  AAATSLFTAIPALAVGCYSHYRTGNMRFHAGNRILLTAVPATVVGSLAAPYIPELVYSWA 101

Query: 130 FAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG--IFTNLLML 186
            AI  +++G+ ML++      ++     +  Y+ GM++G + G  G+ GG  I   L+++
Sbjct: 102 IAIIFMVLGVQMLRQSFGRKAKKTTQPAWFAYVLGMISGLMVGVAGLSGGGPIMAGLMLM 161

Query: 187 FYGASIYKATATSA 200
             G  +  A ATS+
Sbjct: 162 --GLDMPHAAATSS 173


>gi|268590457|ref|ZP_06124678.1| inner membrane protein YfcA [Providencia rettgeri DSM 1131]
 gi|291314137|gb|EFE54590.1| inner membrane protein YfcA [Providencia rettgeri DSM 1131]
          Length = 267

 Score = 38.9 bits (89), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 34/258 (13%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y  L  VA F +G +  + G GGGL+ +P L        +   I    A+ T+       
Sbjct: 12  YALLFFVALF-AGFIDSIAG-GGGLLTIPAL--------LSVGITPVEALATNKLQAVGG 61

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  S +   R   I+++       +  I  ++ +++I  +D +FL +   I  + +G+  
Sbjct: 62  SFSSTLYFVRRKAIDLRAQLFPFIMTMIGAMLGAIVIQMIDTAFLKQLLPILVICVGLYF 121

Query: 142 L------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYK 194
           L       +DR   +++    +     GM  GF  GA G G G F  L  +L  G ++ K
Sbjct: 122 LLTPSIGVQDR---QQRISMPFFGVAIGMTLGFYDGAFGPGTGSFLALGYVLLLGYNLAK 178

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILPISI 245
           ATA +  ++    F +L+  I  G  L     W+LGFV          +GA L++     
Sbjct: 179 ATAHAKLLNFASNFGSLVFFIIGGHVL-----WALGFVMLIGQMVGARLGARLVLTKGQK 233

Query: 246 LITPLATKLSYMIGKKYL 263
           LI P+   +S ++  K L
Sbjct: 234 LIRPMIVVISLLMSIKLL 251


>gi|207722331|ref|YP_002252767.1| permease protein [Ralstonia solanacearum MolK2]
 gi|206587508|emb|CAQ18090.1| permease protein [Ralstonia solanacearum MolK2]
          Length = 264

 Score = 38.9 bits (89), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 23/186 (12%)

Query: 58  LMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM 117
           L G+D     H+A GT+L +IAP  ++ F  + +H  + ++ +        ++T V +  
Sbjct: 41  LYGMDQ----HLAQGTALVMIAPNVLIGFWRYHQHHPVPLRSVATLCAFAMVSTYVAARF 96

Query: 118 ISHVDKSFLNKAFAIFCLLMGILMLK--RDR------------LYCERKFPDNYVKYIWG 163
            + +D + L  AFA F + + +      RD+                 +     V  + G
Sbjct: 97  AAGLDAAHLRTAFAWFLIALAVYFASQLRDKAHPDPAAAHPAPAPGAARAMPPAVLLLLG 156

Query: 164 MVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGV---SALIAFPALLVRIYSGW 219
           + +G +SG   VGGG +    L+  +G S  +A   +  +    +LIA  A     +  W
Sbjct: 157 IASGGMSGIFTVGGGLVVVPALVTLFGMSQTRAQGMALALVVPGSLIALAAYAHAGHVSW 216

Query: 220 GLNGLP 225
           G  G+P
Sbjct: 217 G-TGIP 221


>gi|158424560|ref|YP_001525852.1| hypothetical protein AZC_2936 [Azorhizobium caulinodans ORS 571]
 gi|158331449|dbj|BAF88934.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 275

 Score = 38.9 bits (89), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 103/246 (41%), Gaps = 12/246 (4%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
           FG  GGLV+VPVL      +G+ +S+ +HVA G SL ++A T +  +   R   +     
Sbjct: 30  FGAYGGLVIVPVLHPLLTTLGMHNSLVVHVATGISLALVAVTGLRLWRGRRAARSGRGLA 89

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE---RKFPDN 156
              W++ +    V  S+++S +    +   F I  L   + ML    +      R     
Sbjct: 90  PGGWLWAVSAAAVAASVVVSALPSGEMELVFTIAVLAGAVKMLFLGHISAPSGARLVAAG 149

Query: 157 YVKYIWGMVTGF--LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
                     GF  L  +L   GG F  L   + GA   +  A    V A++A P L   
Sbjct: 150 GGGAATLSDDGFSDLESSL---GGAFHKLRDAWAGAG--RMMADPLAVCAVLAVPGLFGL 204

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL--TIGFSMIMF 272
             + +G    P  S  F+ +  V +IL  ++ + PL   LS    K+ L  ++G  ++M 
Sbjct: 205 AAAVFGDPQFPAASADFMQVFGVAVILVTAVGLAPLGAALSGQFPKRVLEVSLGVFLLML 264

Query: 273 TTSFVF 278
              F +
Sbjct: 265 AGEFAY 270


>gi|222097136|ref|YP_002531193.1| hypothetical protein BCQ_3476 [Bacillus cereus Q1]
 gi|221241194|gb|ACM13904.1| membrane protein, putative [Bacillus cereus Q1]
          Length = 241

 Score = 38.9 bits (89), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 22/152 (14%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI---------LKDWIFVLPITTVVTS 115
           I +HVA+ TSL  +A T++   + H R G + + I         L  +     I + + S
Sbjct: 26  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGALGSY-----IGSKIGS 80

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILMLK----RDRLYCERK--FPDNYVKYI-WGMVTGF 168
           L+  H+   F      +  + M I ++K     + L  E K    +N +K I  G+VTG 
Sbjct: 81  LIPGHLLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGM 140

Query: 169 LSGALGVGGGIFTNL-LMLFYGASIYKATATS 199
           ++G+ G+G   F  L LM+  G +I ++  T+
Sbjct: 141 MAGSFGIGSAPFIQLGLMVLLGLTIQQSVGTT 172


>gi|170290371|ref|YP_001737187.1| permease [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174451|gb|ACB07504.1| Predicted permease [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 285

 Score = 38.9 bits (89), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 63/121 (52%), Gaps = 13/121 (10%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS---LGVIAPTSV 83
           ++AS+L+G +S + G+GGG++ VP+++   QLM    ++ M  A+ TS   +GV A T  
Sbjct: 170 LIASYLAGIISAMLGLGGGIIKVPIMN---QLM----NVPMKAAVATSKFMIGVTASTGA 222

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + ++    +G +N + +      + I     + +++ +  SF+   F +  L     M+ 
Sbjct: 223 LLYLA---YGLVNGEAVAPVAVGVMIGATAGTYVMNRMKASFIKLTFGLLLLYFAYNMIL 279

Query: 144 R 144
           R
Sbjct: 280 R 280


>gi|42780649|ref|NP_977896.1| hypothetical protein BCE_1575 [Bacillus cereus ATCC 10987]
 gi|206978393|ref|ZP_03239264.1| putative membrane protein [Bacillus cereus H3081.97]
 gi|42736569|gb|AAS40504.1| membrane protein, putative [Bacillus cereus ATCC 10987]
 gi|206743398|gb|EDZ54834.1| putative membrane protein [Bacillus cereus H3081.97]
 gi|324325567|gb|ADY20827.1| hypothetical protein YBT020_07905 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 266

 Score = 38.9 bits (89), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 39/205 (19%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +YI L+ +   ++GT+  L G+GGG+++VP+      L+G+  S+   +A+GTS+  +  
Sbjct: 2   EYIMLLFIG-LIAGTVGSLVGLGGGIIIVPL------LIGL-HSLSPQLAVGTSMVTVVF 53

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA-----FAIFCL 135
           T + S + + +H  ++ K       +L I +    ++ S  +K FLN+      F IF +
Sbjct: 54  TGLSSTLTYMKHKRVDYK----SGLILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLI 108

Query: 136 LMGILMLKRDRL---------YCERKFPDNY---VKYIW--------GMVTGFLSGALGV 175
            + IL++ RD+L           +R F DN    V Y +          + GF+SG  G+
Sbjct: 109 FVSILLMLRDKLKPLSLSNMTVIKRSFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGI 168

Query: 176 GGG-IFTNLLMLFYGASIYKATATS 199
           GGG +    +ML +    + A ATS
Sbjct: 169 GGGALLVPAMMLLFAFPAHIAVATS 193



 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 151 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 203

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 204 SSATHISLGNVS------WIYAL 220


>gi|302348364|ref|YP_003816002.1| predicted permease [Acidilobus saccharovorans 345-15]
 gi|302328776|gb|ADL18971.1| predicted permease [Acidilobus saccharovorans 345-15]
          Length = 273

 Score = 38.9 bits (89), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 25/127 (19%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+ +  F+ G +SG FG+GGG ++VP L            +C+  A+GTSL  +    + 
Sbjct: 155 LVAIFGFVVGLISGYFGIGGGFLIVPALM-------FSSGLCITRAIGTSLLSVGTFGMA 207

Query: 85  SFMEHRRHGTINMKILKDWIFVLP---------ITTVVTSLMISHVDKSFLNKAFAIFCL 135
             +E+  +G        D +F++             + TSL +    K+ L +A+ I  +
Sbjct: 208 GGLEYAVYG--------DTLFIISLLYVLGGVGGGFLGTSLAVKAPKKT-LQRAYGIIIV 258

Query: 136 LMGILML 142
           L+GI M+
Sbjct: 259 LVGIYMI 265


>gi|49184377|ref|YP_027629.1| hypothetical protein BAS1360 [Bacillus anthracis str. Sterne]
 gi|165872665|ref|ZP_02217295.1| putative membrane protein [Bacillus anthracis str. A0488]
 gi|167641636|ref|ZP_02399882.1| putative membrane protein [Bacillus anthracis str. A0193]
 gi|170706175|ref|ZP_02896636.1| putative membrane protein [Bacillus anthracis str. A0389]
 gi|177651404|ref|ZP_02934193.1| putative membrane protein [Bacillus anthracis str. A0174]
 gi|190568100|ref|ZP_03021010.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I]
 gi|227815702|ref|YP_002815711.1| hypothetical protein BAMEG_3122 [Bacillus anthracis str. CDC 684]
 gi|229602723|ref|YP_002865959.1| hypothetical protein BAA_1539 [Bacillus anthracis str. A0248]
 gi|254733802|ref|ZP_05191516.1| hypothetical protein BantWNA_01346 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254753897|ref|ZP_05205932.1| hypothetical protein BantV_15578 [Bacillus anthracis str. Vollum]
 gi|254758992|ref|ZP_05211019.1| hypothetical protein BantA9_11849 [Bacillus anthracis str.
           Australia 94]
 gi|270000574|ref|NP_843925.2| hypothetical protein BA_1470 [Bacillus anthracis str. Ames]
 gi|49178304|gb|AAT53680.1| membrane protein, putative [Bacillus anthracis str. Sterne]
 gi|164711609|gb|EDR17156.1| putative membrane protein [Bacillus anthracis str. A0488]
 gi|167510429|gb|EDR85829.1| putative membrane protein [Bacillus anthracis str. A0193]
 gi|170128709|gb|EDS97575.1| putative membrane protein [Bacillus anthracis str. A0389]
 gi|172082682|gb|EDT67745.1| putative membrane protein [Bacillus anthracis str. A0174]
 gi|190560834|gb|EDV14809.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I]
 gi|227006159|gb|ACP15902.1| putative membrane protein [Bacillus anthracis str. CDC 684]
 gi|229267131|gb|ACQ48768.1| putative membrane protein [Bacillus anthracis str. A0248]
 gi|269850270|gb|AAP25411.2| putative membrane protein [Bacillus anthracis str. Ames]
          Length = 266

 Score = 38.9 bits (89), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 39/205 (19%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +YI L+ +   ++GT+  L G+GGG+++VP+      L+G+  S+   +A+GTS+  +  
Sbjct: 2   EYIMLLFIG-LIAGTVGSLVGLGGGIIIVPL------LIGL-HSLSPQLAVGTSMVTVVF 53

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA-----FAIFCL 135
           T + S + + +H  ++ K       +L I +    ++ S  +K FLN+      F IF +
Sbjct: 54  TGLSSTLTYMKHKRVDYK----SGLILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLI 108

Query: 136 LMGILMLKRDRL---------YCERKFPDNY---VKYIW--------GMVTGFLSGALGV 175
            + IL++ RD+L           +R F DN    V Y +          + GF+SG  G+
Sbjct: 109 FVSILLILRDKLKPLSLSNMTVIKRSFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGI 168

Query: 176 GGG-IFTNLLMLFYGASIYKATATS 199
           GGG +    +ML +    + A ATS
Sbjct: 169 GGGALLVPAMMLLFAFPAHIAVATS 193



 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 151 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 203

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 204 SSATHISLGNVS------WIYAL 220


>gi|152984238|ref|YP_001347054.1| hypothetical protein PSPA7_1670 [Pseudomonas aeruginosa PA7]
 gi|150959396|gb|ABR81421.1| membrane protein, putative [Pseudomonas aeruginosa PA7]
          Length = 250

 Score = 38.9 bits (89), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 12/145 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMK-ILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           A+G SLG +A ++++  +   R G +  + +L   +  LP +  V   +   V +  L  
Sbjct: 44  AIGVSLGAVALSALIGAIPRARQGQVAWRPVLILALAGLP-SNAVGQWLGRFVPEGVLIV 102

Query: 129 AFAIFCLLMGILM-----LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG-IFTN 182
           AF +  L     M     +KR+     R  P   +    G+  G LSG +GVGGG +   
Sbjct: 103 AFCLLVLWSAWRMWRGAGMKREASDQARNLPLLGI----GLAVGLLSGLMGVGGGFLVVP 158

Query: 183 LLMLFYGASIYKATATSAGVSALIA 207
            L+ F   S+  ATATS  V AL++
Sbjct: 159 GLLWFTPLSMMAATATSMAVIALVS 183


>gi|49477238|ref|YP_035668.1| hypothetical protein BT9727_1334 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|167634352|ref|ZP_02392673.1| putative membrane protein [Bacillus anthracis str. A0442]
 gi|170689264|ref|ZP_02880460.1| putative membrane protein [Bacillus anthracis str. A0465]
 gi|196039064|ref|ZP_03106371.1| putative membrane protein [Bacillus cereus NVH0597-99]
 gi|196047709|ref|ZP_03114912.1| putative membrane protein [Bacillus cereus 03BB108]
 gi|225863414|ref|YP_002748792.1| hypothetical protein BCA_1509 [Bacillus cereus 03BB102]
 gi|254682386|ref|ZP_05146247.1| hypothetical protein BantC_00853 [Bacillus anthracis str.
           CNEVA-9066]
 gi|254721229|ref|ZP_05183019.1| hypothetical protein BantA1_02075 [Bacillus anthracis str. A1055]
 gi|254740506|ref|ZP_05198197.1| hypothetical protein BantKB_05718 [Bacillus anthracis str. Kruger
           B]
 gi|300118501|ref|ZP_07056240.1| hypothetical protein BCSJ1_14390 [Bacillus cereus SJ1]
 gi|301053090|ref|YP_003791301.1| membrane protein [Bacillus anthracis CI]
 gi|49328794|gb|AAT59440.1| conserved hypothetical protein, possible membrane protein [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|167530240|gb|EDR92966.1| putative membrane protein [Bacillus anthracis str. A0442]
 gi|170666819|gb|EDT17586.1| putative membrane protein [Bacillus anthracis str. A0465]
 gi|196021459|gb|EDX60163.1| putative membrane protein [Bacillus cereus 03BB108]
 gi|196030209|gb|EDX68809.1| putative membrane protein [Bacillus cereus NVH0597-99]
 gi|225787896|gb|ACO28113.1| putative membrane protein [Bacillus cereus 03BB102]
 gi|298724025|gb|EFI64728.1| hypothetical protein BCSJ1_14390 [Bacillus cereus SJ1]
 gi|300375259|gb|ADK04163.1| conserved hypothetical membrane protein [Bacillus cereus biovar
           anthracis str. CI]
          Length = 266

 Score = 38.9 bits (89), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 39/205 (19%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +YI L+ +   ++GT+  L G+GGG+++VP+      L+G+  S+   +A+GTS+  +  
Sbjct: 2   EYIMLLFIG-LIAGTVGSLVGLGGGIIIVPL------LIGL-HSLSPQLAVGTSMVTVVF 53

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA-----FAIFCL 135
           T + S + + +H  ++ K       +L I +    ++ S  +K FLN+      F IF +
Sbjct: 54  TGLSSTLTYMKHKRVDYK----SGLILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLI 108

Query: 136 LMGILMLKRDRL---------YCERKFPDNY---VKYIW--------GMVTGFLSGALGV 175
            + IL++ RD+L           +R F DN    V Y +          + GF+SG  G+
Sbjct: 109 FVSILLMLRDKLKPLSLSNMTVIKRSFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGI 168

Query: 176 GGG-IFTNLLMLFYGASIYKATATS 199
           GGG +    +ML +    + A ATS
Sbjct: 169 GGGALLVPAMMLLFAFPAHIAVATS 193



 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 151 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 203

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 204 SSATHISLGNVS------WIYAL 220


>gi|332139492|ref|YP_004425230.1| hypothetical protein MADE_1000415 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327549514|gb|AEA96232.1| hypothetical protein MADE_1000415 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 266

 Score = 38.9 bits (89), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 8/126 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I LI++   + G ++G+ G GGG +++P L     ++G+     M  A+G SL +IA  S
Sbjct: 148 IGLIVIEGAVVGVVTGILGAGGGFLIIPAL---VLILGMP----MKNAVGASLFIIALKS 200

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLP-ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ F+   + G      L   + V   I   V++ +   +D + L K FA F L++ + +
Sbjct: 201 LLGFVGDLQTGIQLEMPLLPLMLVATFIGMAVSTKVAGKLDGAALQKFFAFFTLVIAVFI 260

Query: 142 LKRDRL 147
           + ++ L
Sbjct: 261 MTKELL 266


>gi|192361530|ref|YP_001981013.1| hypothetical protein CJA_0490 [Cellvibrio japonicus Ueda107]
 gi|190687695|gb|ACE85373.1| putative membrane protein [Cellvibrio japonicus Ueda107]
          Length = 288

 Score = 38.9 bits (89), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 14/129 (10%)

Query: 4   LLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD 63
           LL N  L VF  + C +D+    IVA  + G + G+ GVGGG +M P+L       G+  
Sbjct: 13  LLKNQHLPVFSPESCFMDFHIGYIVAGLVVGFIVGMTGVGGGSLMTPIL----LYFGVSP 68

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF-VLPITTVVTSLMISH-- 120
           +     A+GT L   A T       H +   I+ +I  +     LP   +  +L++ H  
Sbjct: 69  A----NAVGTDLLYAAITKAGGIHVHHKKKNIDWRITGELALGSLPAAAL--TLLVLHSI 122

Query: 121 -VDKSFLNK 128
            +D   LNK
Sbjct: 123 SIDTDTLNK 131


>gi|15598653|ref|NP_252147.1| hypothetical protein PA3457 [Pseudomonas aeruginosa PAO1]
 gi|9949599|gb|AAG06845.1|AE004766_6 hypothetical protein PA3457 [Pseudomonas aeruginosa PAO1]
          Length = 250

 Score = 38.9 bits (89), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 12/145 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMK-ILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           A+G SLG +A ++++  +   R G +  + +L   +  LP +  V   +   V +  L  
Sbjct: 44  AIGVSLGAVALSALIGAIPRARQGQVAWRPVLVLALAGLP-SNAVGQWLGRFVPEGVLIV 102

Query: 129 AFAIFCLLMGILM-----LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG-IFTN 182
           AF +  L     M     +KR+     R  P   +    G+  G LSG +GVGGG +   
Sbjct: 103 AFCLLVLWSAWRMWRGAGMKREASDQARSLPLLGI----GLAVGLLSGLMGVGGGFLVVP 158

Query: 183 LLMLFYGASIYKATATSAGVSALIA 207
            L+ F   S+  ATATS  V AL++
Sbjct: 159 GLLWFTPLSMMAATATSMAVIALVS 183


>gi|116051477|ref|YP_789690.1| hypothetical protein PA14_19390 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218890343|ref|YP_002439207.1| putative transmembrane protein [Pseudomonas aeruginosa LESB58]
 gi|254242143|ref|ZP_04935465.1| hypothetical protein PA2G_02872 [Pseudomonas aeruginosa 2192]
 gi|296388026|ref|ZP_06877501.1| putative transmembrane protein [Pseudomonas aeruginosa PAb1]
 gi|115586698|gb|ABJ12713.1| putative transmembrane protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126195521|gb|EAZ59584.1| hypothetical protein PA2G_02872 [Pseudomonas aeruginosa 2192]
 gi|218770566|emb|CAW26331.1| putative transmembrane protein [Pseudomonas aeruginosa LESB58]
          Length = 250

 Score = 38.9 bits (89), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 12/145 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMK-ILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           A+G SLG +A ++++  +   R G +  + +L   +  LP +  V   +   V +  L  
Sbjct: 44  AIGVSLGAVALSALIGAIPRARQGQVAWRPVLVLALAGLP-SNAVGQWLGRFVPEGVLIV 102

Query: 129 AFAIFCLLMGILM-----LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG-IFTN 182
           AF +  L     M     +KR+     R  P   +    G+  G LSG +GVGGG +   
Sbjct: 103 AFCLLVLWSAWRMWRGAGMKREASDQARSLPLLGI----GLAVGLLSGLMGVGGGFLVVP 158

Query: 183 LLMLFYGASIYKATATSAGVSALIA 207
            L+ F   S+  ATATS  V AL++
Sbjct: 159 GLLWFTPLSMMAATATSMAVIALVS 183


>gi|154500403|ref|ZP_02038441.1| hypothetical protein BACCAP_04070 [Bacteroides capillosus ATCC
           29799]
 gi|150270908|gb|EDM98191.1| hypothetical protein BACCAP_04070 [Bacteroides capillosus ATCC
           29799]
          Length = 130

 Score = 38.9 bits (89), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 59/122 (48%), Gaps = 8/122 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L + A  L+G LSG FG+GGG +++ +   +F        +  ++A G +L    PT+  
Sbjct: 6   LPVAAGALTGILSG-FGIGGGTLLL-IYMTSFA------GVPQNLAQGVNLLYFLPTAAT 57

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +   H ++G ++       I    + T +++   + +D   L + F ++ L +G+  L R
Sbjct: 58  ALPAHIKNGYVDRTAAWPAILAGLLGTALSAWAATGLDVHLLRRCFGVYLLYVGVTELFR 117

Query: 145 DR 146
            +
Sbjct: 118 KK 119


>gi|327396155|dbj|BAK13577.1| predicted permeasa hypothetical protein [Pantoea ananatis AJ13355]
          Length = 265

 Score = 38.9 bits (89), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 10/160 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+IV     G    L G GG ++ VP+L     L+ + D+   H  +GTS   +A ++
Sbjct: 16  VSLLIVTGIAVGFFLALTGGGGSVMCVPLL---LYLVKVPDT---HRVIGTSAIAVAVSA 69

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++   H   G +          V     ++ + +   V   +L   F++    + ++ML
Sbjct: 70  LINLFAHSHKGNVRWATGARISLVAVCGALLGAELGKIVSGQYLLLPFSLLMFSVALMML 129

Query: 143 KRDRLYCERKFPDNYV--KYIWGMV--TGFLSGALGVGGG 178
           ++         PD +     +WG V   G L+G +G+GGG
Sbjct: 130 RKQSPLPGASAPDRHFAPAIVWGSVLLLGILAGFMGIGGG 169


>gi|284929082|ref|YP_003421604.1| putative permease [cyanobacterium UCYN-A]
 gi|284809541|gb|ADB95246.1| predicted permease [cyanobacterium UCYN-A]
          Length = 262

 Score = 38.9 bits (89), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 12/97 (12%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++DYI ++ ++   SG L+G+ G+GGG ++V +      L+   ++    VA  +   VI
Sbjct: 1   MLDYILILSISGLFSGLLAGVLGIGGGAILVSL------LLAFKNTPLQAVATSSMAIVI 54

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
             +S    +++RR G +N++     +F+L I  +VT+
Sbjct: 55  IASS--GSLQNRRMGNLNLQK----VFLLGIPAMVTA 85


>gi|229058186|ref|ZP_04196575.1| hypothetical protein bcere0026_13010 [Bacillus cereus AH603]
 gi|229132358|ref|ZP_04261212.1| hypothetical protein bcere0014_12940 [Bacillus cereus BDRD-ST196]
 gi|228651064|gb|EEL07045.1| hypothetical protein bcere0014_12940 [Bacillus cereus BDRD-ST196]
 gi|228720151|gb|EEL71733.1| hypothetical protein bcere0026_13010 [Bacillus cereus AH603]
          Length = 262

 Score = 38.9 bits (89), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 10/85 (11%)

Query: 15  SKDCVVDYIC---LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
           ++   VDY     L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+
Sbjct: 134 NEGNTVDYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAV 186

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTIN 96
            TS+ ++  ++++S + H   G ++
Sbjct: 187 ATSMFIVFLSAIVSSLTHISLGNVS 211



 Score = 38.1 bits (87), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 50/223 (22%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+      L+G+  S+   +A+GTS+  +  T + S + + +H  ++ K       
Sbjct: 22  IIIVPL------LIGL-HSLSPQLAVGTSMVTVVFTGLASTLTYMKHKRVDYK----SGL 70

Query: 106 VLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILMLKRDRL---------YCER 151
           +L I +    ++ S  +K FLN+      F IF + + IL++ RD+L           +R
Sbjct: 71  ILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLIFVSILLILRDKLKPLSLSNMTVIKR 129

Query: 152 KFPDN-----------YVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            F DN           ++      + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 130 SFTDNEGNTVDYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 189

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
             +  L A  + L  I            SLG V+    LI++P
Sbjct: 190 MFIVFLSAIVSSLTHI------------SLGNVSWAYALILIP 220


>gi|229166393|ref|ZP_04294150.1| hypothetical protein bcere0007_13660 [Bacillus cereus AH621]
 gi|228617135|gb|EEK74203.1| hypothetical protein bcere0007_13660 [Bacillus cereus AH621]
          Length = 262

 Score = 38.9 bits (89), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 10/85 (11%)

Query: 15  SKDCVVDYIC---LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
           ++   VDY     L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+
Sbjct: 134 NEGNTVDYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAV 186

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTIN 96
            TS+ ++  ++++S + H   G ++
Sbjct: 187 ATSMFIVFLSAIVSSLTHISLGNVS 211



 Score = 37.4 bits (85), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 50/223 (22%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+      L+G+ + +   +A+GTS+  +  T + S + + +H  ++ K       
Sbjct: 22  IIIVPL------LIGLHN-LSPQLAVGTSMVTVVFTGLASTLTYMKHKRVDYK----SGL 70

Query: 106 VLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILMLKRDRL---------YCER 151
           +L I +    ++ S  +K FLN+      F IF + + IL++ RD+L           +R
Sbjct: 71  ILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLIFVSILLILRDKLKPLSLSNMTVIKR 129

Query: 152 KFPDN-----------YVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            F DN           ++      + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 130 SFTDNEGNTVDYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 189

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
             +  L A  + L  I            SLG V+    LI++P
Sbjct: 190 MFIVFLSAIVSSLTHI------------SLGNVSWAYALILIP 220


>gi|229010855|ref|ZP_04168052.1| hypothetical protein bmyco0001_13100 [Bacillus mycoides DSM 2048]
 gi|228750529|gb|EEM00358.1| hypothetical protein bmyco0001_13100 [Bacillus mycoides DSM 2048]
          Length = 262

 Score = 38.5 bits (88), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 10/85 (11%)

Query: 15  SKDCVVDYIC---LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
           ++   VDY     L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+
Sbjct: 134 NEGNTVDYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAV 186

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTIN 96
            TS+ ++  ++++S + H   G ++
Sbjct: 187 ATSMFIVFLSAIVSSLTHISLGNVS 211



 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 38/180 (21%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+      L+G+  S+   +A+GTS+  +  T + S + + +H  ++ K       
Sbjct: 22  IIIVPL------LIGL-HSLSPQLAVGTSMVTVVFTGLASTLTYMKHKRVDYK----SGL 70

Query: 106 VLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILMLKRDRL---------YCER 151
           +L I +    ++ S  +K FLN+      F IF + + IL++ RD+L           +R
Sbjct: 71  ILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLIFVSILLILRDKLKPLSLSNMTVIKR 129

Query: 152 KFPDN-----------YVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            F DN           ++      + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 130 SFTDNEGNTVDYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 189


>gi|89099982|ref|ZP_01172853.1| hypothetical Membrane Spanning Protein [Bacillus sp. NRRL B-14911]
 gi|89085374|gb|EAR64504.1| hypothetical Membrane Spanning Protein [Bacillus sp. NRRL B-14911]
          Length = 240

 Score = 38.5 bits (88), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 15/174 (8%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G L G  G GG   ++ +L+  F        + +H A+GTSL  +  T++     H R G
Sbjct: 5   GILLGFIGAGGSGFIIALLTVVF-------GVPIHTALGTSLAAMVFTTLSGAYSHYRQG 57

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR----DRLYC 149
            I++K+         +T+ + S +   +    L+   A    L  +++L R     R+  
Sbjct: 58  NIDVKMGLAVGCFGAVTSFLGSGIAVWIPVDSLHWLTAGMLFLSAVMLLVRLFIVSRMED 117

Query: 150 ERKFPDN--YVKYIW-GMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATS 199
           +   P    ++K  + G+V G LSG  G+G   F  L L+   G S+ K+  T+
Sbjct: 118 KGAEPQRRLFMKAAFVGIVCGLLSGTFGIGSAPFIQLGLLAVLGLSVQKSVGTT 171


>gi|84500291|ref|ZP_00998557.1| membrane protein [Oceanicola batsensis HTCC2597]
 gi|84392225|gb|EAQ04493.1| membrane protein [Oceanicola batsensis HTCC2597]
          Length = 306

 Score = 38.5 bits (88), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG ++ P+L      +GI  +    VA+ TS   I  +SV + + H R  
Sbjct: 25 GVLSGMFGVGGGFLITPLLF----FVGIPPA----VAVATSANQIVASSVSAVLAHLRRR 76

Query: 94 TINMKI 99
          T+++++
Sbjct: 77 TVDLRM 82


>gi|86360493|ref|YP_472381.1| hypothetical protein RHE_PE00219 [Rhizobium etli CFN 42]
 gi|86284595|gb|ABC93654.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 259

 Score = 38.5 bits (88), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 54/266 (20%)

Query: 32  LSGTLSG----LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           LSG L G    L G GG ++ VP+L  A   +G+ D+   H A+ TS   +A  +++S +
Sbjct: 13  LSGALVGFTLALLGGGGSILAVPLLVHA---VGLTDA---HTAIATSAVAVASNALISLV 66

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA----FAIFCLLMGILMLK 143
            H R GT+  +    +  +   T +V +L+ + + K    K     F+   + + ILML+
Sbjct: 67  MHARRGTVIWR----YAGLYCATGIVGALLGASIGKMLDGKHLLLYFSGLMIAIAILMLR 122

Query: 144 R------DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM----------LF 187
           R      +    ER+   N  K +          A+G G G+ +              L 
Sbjct: 123 RISAGSENSCVFERR---NTTKVL----------AIGGGCGVVSGFFGIGGGFLIVPGLV 169

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG--FVNIGAVLIILPISI 245
           +   +    A S  + A++AF +     YS   ++GL  W L   F+  GA   +L  ++
Sbjct: 170 FSTGMPTINAVSTSLVAIVAFGSTTAATYS---ISGLVDWPLAAVFIAGGAFGAVLGCNL 226

Query: 246 L--ITPLATKLSYMIGKKYLTIGFSM 269
           +  + P  + L+ +     LT G +M
Sbjct: 227 VHHLRPYQSALNSVFAGAILTFGIAM 252


>gi|229023011|ref|ZP_04179528.1| hypothetical protein bcere0029_13560 [Bacillus cereus AH1272]
 gi|228738317|gb|EEL88796.1| hypothetical protein bcere0029_13560 [Bacillus cereus AH1272]
          Length = 262

 Score = 38.5 bits (88), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 10/85 (11%)

Query: 15  SKDCVVDYIC---LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
           ++   VDY     L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+
Sbjct: 134 NEGNTVDYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAV 186

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTIN 96
            TS+ ++  ++++S + H   G ++
Sbjct: 187 ATSMFIVFLSAIVSSLTHISLGNVS 211



 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 50/223 (22%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+      L+G+  S+   +A+GTS+  +  T + S + + +H  ++ K       
Sbjct: 22  IIIVPL------LIGL-HSLSPQLAVGTSMVTVVFTGLASTLTYMKHKRVDYK----SGL 70

Query: 106 VLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILMLKRDRL---------YCER 151
           +L I +    ++ S  +K FLN+      F IF + + IL++ RD+L           +R
Sbjct: 71  ILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLIFVSILLILRDKLKPLSLSNMTVIKR 129

Query: 152 KFPDN-----------YVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            F DN           ++      + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 130 SFTDNEGNTVDYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 189

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
             +  L A  + L  I            SLG V+    LI++P
Sbjct: 190 MFIVFLSAIVSSLTHI------------SLGNVSWAYALILIP 220


>gi|319891901|ref|YP_004148776.1| hypothetical protein SPSINT_0611 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161597|gb|ADV05140.1| hypothetical protein SPSINT_0611 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323465008|gb|ADX77161.1| conserved membrane protein, putative [Staphylococcus
           pseudintermedius ED99]
          Length = 274

 Score = 38.5 bits (88), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 7/63 (11%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+ASF+ G  +GLFG+GGG +M P++   F+          H+A+GTS+ +I  +SV   
Sbjct: 160 IIASFIIGLTAGLFGIGGGALMTPLMLLVFRF-------PPHIAVGTSMMMIFFSSVTGS 212

Query: 87  MEH 89
           + H
Sbjct: 213 IGH 215


>gi|148253368|ref|YP_001237953.1| hypothetical protein BBta_1844 [Bradyrhizobium sp. BTAi1]
 gi|146405541|gb|ABQ34047.1| putative membrane protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 260

 Score = 38.5 bits (88), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 91/205 (44%), Gaps = 27/205 (13%)

Query: 37  SGLFGV--GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPTSVMSFMEHRRHG 93
           SGL GV  GGGLV+  VL     L+G +     HVA G SL   I PTS+     +R  G
Sbjct: 21  SGLLGVSPGGGLVVFAVL-----LLGAEQ----HVAQGLSLVAQIPPTSLAGIKRYRDEG 71

Query: 94  TINMKILKDWI---FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
                 +  W+   F+L    V+ +++ +    + L  A+ I+ LL+ +L+L+R      
Sbjct: 72  GRVSPSMVVWLGSGFLL--GGVIGAVIANGTAATVLQWAYVIYLLLLDVLLLRRSSHREP 129

Query: 151 RKFPDNYVKYIW------GMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVS 203
            +  D  +          G   G  SG LG+GGG+ T + L    G + ++A   S    
Sbjct: 130 AQTMDAELDPGALALLGVGCAAGVSSGFLGIGGGLATVVGLSAVLGMAQHRAQMISL--- 186

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWS 228
            L   P  +   +  W    LPPWS
Sbjct: 187 VLTLVPTTIPSAWIYWRHGALPPWS 211


>gi|254294281|ref|YP_003060304.1| hypothetical protein Hbal_1922 [Hirschia baltica ATCC 49814]
 gi|254042812|gb|ACT59607.1| protein of unknown function DUF81 [Hirschia baltica ATCC 49814]
          Length = 264

 Score = 38.5 bits (88), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 10/81 (12%)

Query: 20 VDYICLIIVASFLSGTLSGL----FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
          ++ I  IIV + LSG + G+    FG GG ++  P+L     L+GI+D    H+A+GTS 
Sbjct: 2  IELIPSIIVLTLLSGIIVGIFLGTFGGGGSVLAAPLL---IYLVGIEDP---HIAIGTSA 55

Query: 76 GVIAPTSVMSFMEHRRHGTIN 96
            +A  ++ S + H R G + 
Sbjct: 56 AGVAAIALFSLIGHWRGGRVK 76


>gi|312142636|ref|YP_003994082.1| protein of unknown function DUF81 [Halanaerobium sp. 'sapolanicus']
 gi|311903287|gb|ADQ13728.1| protein of unknown function DUF81 [Halanaerobium sp. 'sapolanicus']
          Length = 256

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 26/180 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I +I++A F +G ++GL G    +++ P L      +G D     + A+G SL      S
Sbjct: 4   IFIILIAGFGAGVVTGLVGASAVVIVTPFL---VTFLGYDP----YSAIGISLATDVVAS 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS----HVDKSFLNKAFAIFCLLMG 138
            +S   ++ HG IN+K       ++ I+ V  +++ S     ++ + L     +  LL G
Sbjct: 57  SVSAYTYKSHGNINIK----GGLLIAISAVTAAIIGSWFSGGMNSTTLGGMTGVIILLTG 112

Query: 139 ILMLKR---DRLYC-ERKFPDNYVKY-------IWGMVTGFLSGALGVGGGIFTNLLMLF 187
           I   ++    R+   + KF  N+ +        ++G + G ++G  G GGG+   +++ F
Sbjct: 113 ISFTRKPINQRVEEFKNKFDLNFFRERTRFSSILFGTLIGLMTGVFGAGGGVMILIVLTF 172


>gi|108802274|ref|YP_642471.1| hypothetical protein Mmcs_5314 [Mycobacterium sp. MCS]
 gi|119871427|ref|YP_941379.1| hypothetical protein Mkms_5403 [Mycobacterium sp. KMS]
 gi|108772693|gb|ABG11415.1| protein of unknown function DUF81 [Mycobacterium sp. MCS]
 gi|119697516|gb|ABL94589.1| protein of unknown function DUF81 [Mycobacterium sp. KMS]
          Length = 291

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 19/126 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II    + G ++GL G GGG ++VP L+    L+G    + M +A+GTSL VIA  S   
Sbjct: 134 IIAEGLVVGLVTGLVGAGGGFLVVPALA----LLG---GLPMPIAVGTSLIVIAMKSFAG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPIT------TVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                  G     +  DW   L +T       +V + + + V+   L KAF  F L M  
Sbjct: 187 L------GGYLSSVQIDWSVALAVTGAAVVGALVGARLTAMVNPDSLRKAFGWFVLAMSW 240

Query: 140 LMLKRD 145
           ++L ++
Sbjct: 241 VILGQE 246


>gi|18313308|ref|NP_559975.1| hypothetical protein PAE2388 [Pyrobaculum aerophilum str. IM2]
 gi|18160832|gb|AAL64157.1| hypothetical protein PAE2388 [Pyrobaculum aerophilum str. IM2]
          Length = 243

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 7/69 (10%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F+ G +S LFGVGGG + VP L     L G+D      +A   S+G+I PT++ S   + 
Sbjct: 129 FIGGFVSSLFGVGGGTIFVPAL---ILLAGLDA----KLAAAMSMGIIFPTALASTATYA 181

Query: 91  RHGTINMKI 99
             G +++ +
Sbjct: 182 WLGALDLSL 190


>gi|126438256|ref|YP_001073947.1| hypothetical protein Mjls_5693 [Mycobacterium sp. JLS]
 gi|126238056|gb|ABO01457.1| protein of unknown function DUF81 [Mycobacterium sp. JLS]
          Length = 291

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 19/126 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II    + G ++GL G GGG ++VP L+    L+G    + M +A+GTSL VIA  S   
Sbjct: 134 IIAEGLVVGLVTGLVGAGGGFLVVPALA----LLG---GLPMPIAVGTSLIVIAMKSFAG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPIT------TVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                  G     +  DW   L +T       +V + + + V+   L KAF  F L M  
Sbjct: 187 L------GGYLSSVQIDWSVALAVTGAAVVGALVGARLTAMVNPDSLRKAFGWFVLAMSS 240

Query: 140 LMLKRD 145
           ++L ++
Sbjct: 241 VILGQE 246


>gi|116748207|ref|YP_844894.1| hypothetical protein Sfum_0761 [Syntrophobacter fumaroxidans MPOB]
 gi|116697271|gb|ABK16459.1| protein of unknown function DUF81 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 260

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 39/172 (22%)

Query: 47  VMVPVLS---KAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDW 103
           +M+P++    KA Q          H A GTSL  I    +   + ++ HG++      DW
Sbjct: 23  IMIPIMVDFLKAGQ----------HEAHGTSLVAIIFAGLAGALTYQLHGSV------DW 66

Query: 104 IFVLPITTVVTSLMISHVDKSF--------LNKAFAIFCLLMGILMLKRDRLYCERKFPD 155
                +    T+++ +     F        L K+F  F L +  LML +   Y     PD
Sbjct: 67  --AASVLLAATAMITAQYGARFAGVLPEWKLKKSFGAFLLFVSALMLVKP--YLPHFAPD 122

Query: 156 NYVKYIW-------GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            + ++         G  TGFLSG +G+GGG +    ++L  G S   A  +S
Sbjct: 123 AFSRWSQVLILLSTGTFTGFLSGMMGIGGGTVMVPAMVLLLGFSQQTAQGSS 174



 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 7/123 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + +++     +G LSG+ G+GGG VMVP +     L+G         A G+SL  + P
Sbjct: 128 SQVLILLSTGTFTGFLSGMMGIGGGTVMVPAM---VLLLGFSQ----QTAQGSSLLAMVP 180

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                   H+R G +   +L   +  + + T V   + + + +  L   FA   +  G+ 
Sbjct: 181 AGAAGAFTHQRLGNVRAALLTGLVPGILVGTYVGGSIANMLPEMQLRLIFAAVIVFTGVR 240

Query: 141 MLK 143
            L+
Sbjct: 241 YLR 243


>gi|164687572|ref|ZP_02211600.1| hypothetical protein CLOBAR_01213 [Clostridium bartlettii DSM
           16795]
 gi|164603346|gb|EDQ96811.1| hypothetical protein CLOBAR_01213 [Clostridium bartlettii DSM
           16795]
          Length = 120

 Score = 38.5 bits (88), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 63/116 (54%), Gaps = 8/116 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+ +F +G ++GLFG GGG ++VP+L+    ++ +++    H +  T+L +I   +V S 
Sbjct: 11  IIGAF-TGFVNGLFGSGGGTLLVPILN---NILKVEE----HKSHATALAIIIFLTVTSS 62

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +   GT ++K+         I  ++ + ++S V   FL  +F I  ++  I M+
Sbjct: 63  VIYVSRGTYDIKLTIQAAIGSIIGGIIGAKLLSKVTGKFLRISFGIVMIISAIRMI 118


>gi|294635841|ref|ZP_06714296.1| putative membrane protein [Edwardsiella tarda ATCC 23685]
 gi|291090813|gb|EFE23374.1| putative membrane protein [Edwardsiella tarda ATCC 23685]
          Length = 266

 Score = 38.5 bits (88), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 116/279 (41%), Gaps = 59/279 (21%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L+ +   L+  LS LFG+GGG+V+VPVL   F       +  + +   TSL V+  T+
Sbjct: 6   IALLCLCGALTSLLSALFGLGGGIVLVPVLHVLF------PACEVQLLAATSLSVVMLTA 59

Query: 83  VMSFMEH-RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL--NKAFAIFCLLMGI 139
           +++ +   R+    + ++L  W         V++ M   V  SFL   +A  +    + +
Sbjct: 60  LINVLAFWRQQLRPDPRLLIGWAL------AVSAGMQLGVHISFLLPGRAILLIFAAILL 113

Query: 140 LMLKRDRLYCERK------FPDNYVKYIWG--MVTGFLSGALGVGGG------------- 178
           LM  R+ L C          P     Y  G  +  G ++G  G+GGG             
Sbjct: 114 LMAWRN-LRCAASSTTTVMSPPRTRNYGIGLCLAGGTVAGITGLGGGSVLAPLLALLPSI 172

Query: 179 ------IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
                 ++ N L+L   A     T T    S L+  P L      G  L G   W  G+V
Sbjct: 173 PRQRIALYCNWLLLLGSA----VTVT----SYLLRTPPL------GAVLPG--AWQFGYV 216

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           N+  VL +   ++L  PLA +L   +   +    FS ++
Sbjct: 217 NLSVVLPVFACALLTQPLAMQLRRRVSDSHQRQAFSGVL 255


>gi|154685065|ref|YP_001420226.1| YdhB [Bacillus amyloliquefaciens FZB42]
 gi|154350916|gb|ABS72995.1| YdhB [Bacillus amyloliquefaciens FZB42]
          Length = 252

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 15/147 (10%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI-LKDWIFVLPITTVVTSLMISHVDK 123
           + +H A+GTSL  +A TS+     H R G I MKI L   +F     +   + + S +  
Sbjct: 40  VPIHTALGTSLAGMAFTSLSGAFSHYREGNIQMKIGLIVGVFA-AFGSFFGARLTSLIPA 98

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY----IW------GMVTGFLSGAL 173
             L+   A    L  +L+L   RL+  ++  ++  +     IW      G++ G LSG  
Sbjct: 99  DLLHYLTAGMLFLSALLILV--RLFIVKETQEDSGQQSNLNIWVKAVVLGVIAGILSGTF 156

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATS 199
           G+G   F  + LM+    SI ++  T+
Sbjct: 157 GIGSAPFIQIGLMILLRLSIRQSVGTT 183


>gi|229157253|ref|ZP_04285333.1| hypothetical protein bcere0010_34370 [Bacillus cereus ATCC 4342]
 gi|228626317|gb|EEK83064.1| hypothetical protein bcere0010_34370 [Bacillus cereus ATCC 4342]
          Length = 272

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 12/147 (8%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHG----TINMKILKDWIFVLPITTVVTSLMISH 120
           I +HVA+ TSL  +A T++   + H R G    TI   +     F   I + + SL+  H
Sbjct: 56  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSLIPRH 115

Query: 121 VDKSFLNKAFAIFCLLMGILMLK----RDRLYCERK--FPDNYVKYI-WGMVTGFLSGAL 173
           +   F      +  + M I ++K     + L  E K    +N +K I  G+VTG ++G+ 
Sbjct: 116 LLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGMMAGSF 175

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATS 199
           G+G   F  L LM+  G +I ++  T+
Sbjct: 176 GIGSAPFIQLGLMVLLGLTIQQSVGTT 202


>gi|229174337|ref|ZP_04301870.1| hypothetical protein bcere0006_34300 [Bacillus cereus MM3]
 gi|228609194|gb|EEK66483.1| hypothetical protein bcere0006_34300 [Bacillus cereus MM3]
          Length = 251

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 22/152 (14%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI---------LKDWIFVLPITTVVTS 115
           I +HVA+ TSL  +A T++   + H R G + + I         L  +     I   + S
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVISHYREGNVVVTIGGIVGGCGALGSY-----IGAKLGS 89

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILMLK----RDRLYCERK--FPDNYVKYI-WGMVTGF 168
           L+  H+   F      +  + M + ++K     + L  E K    DN +K I  G+VTG 
Sbjct: 90  LIPPHLLHWFTAGMLFLSAIFMFVKLIKFQNREELLLAEIKDFSKDNIMKCICLGLVTGM 149

Query: 169 LSGALGVGGGIFTNL-LMLFYGASIYKATATS 199
           ++G+ G+G   F  L LM+  G +I ++  T+
Sbjct: 150 MAGSFGIGSAPFIQLGLMVLLGLTIQQSVGTT 181


>gi|171463247|ref|YP_001797360.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192785|gb|ACB43746.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 119

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 12/103 (11%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I++  L G L G+ GVGGG +M P+L+  F        +    A+GT L   A T     
Sbjct: 12  IISGALVGLLVGITGVGGGSLMTPLLTIIF-------GVAPTTAVGTDLAFAAITKGFGT 64

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLM----ISHVDKSF 125
             HR HG ++  I++  + +  +TT + S++    +  V K F
Sbjct: 65  AAHRLHGNVHWDIVR-LLCIGSLTTAIASILALKYVGPVSKDF 106


>gi|86159865|ref|YP_466650.1| hypothetical protein Adeh_3446 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776376|gb|ABC83213.1| protein of unknown function DUF81 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 255

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 21/156 (13%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +GTL  L G+GGG+++VP+L+  F L           A+  SL VI  +S  +   +   
Sbjct: 13  AGTLGALMGIGGGIIVVPILTAGFGL-------PFRHAVAVSLVVIIASSSSAAASYVDR 65

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDK----SFLNKAFAIFCLLMGILMLKRDRLY 148
              +M++      VL + TV  +++ S V        L   FA   +   ++M +R    
Sbjct: 66  KLSDMRV----GVVLELATVTGAMLGSAVAGLAPVGVLKALFAAVAVYSALVMWRRRPAS 121

Query: 149 CERKFPDNYVKYIWG------MVTGFLSGALGVGGG 178
            +    + Y    WG         G +SG +GVGGG
Sbjct: 122 PQASEGEPYTVRRWGTGLGASAFAGAISGLIGVGGG 157


>gi|167043268|gb|ABZ07974.1| putative domain of unknown function DUF81 [uncultured marine
           crenarchaeote HF4000_ANIW141M12]
          Length = 251

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 19/71 (26%)

Query: 16  KDCVVDYICLIIV----ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
           ++  +D   L++V    ASF +G +S LFG+GGGL+ VP+               M VA+
Sbjct: 121 EEKPIDVSRLLLVFSAGASFFAGIISSLFGIGGGLIFVPL---------------MVVAL 165

Query: 72  GTSLGVIAPTS 82
           G S+   APTS
Sbjct: 166 GISMKRAAPTS 176


>gi|167045656|gb|ABZ10304.1| putative domain of unknown function DUF81 [uncultured marine
           crenarchaeote HF4000_APKG10L15]
          Length = 251

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 19/71 (26%)

Query: 16  KDCVVDYICLIIV----ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
           ++  +D   L++V    ASF +G +S LFG+GGGL+ VP+               M VA+
Sbjct: 121 EEKPIDTSRLLLVFSAGASFFAGIISSLFGIGGGLIFVPL---------------MVVAL 165

Query: 72  GTSLGVIAPTS 82
           G S+   APTS
Sbjct: 166 GISMKRAAPTS 176


>gi|113971274|ref|YP_735067.1| hypothetical protein Shewmr4_2939 [Shewanella sp. MR-4]
 gi|113885958|gb|ABI40010.1| protein of unknown function DUF81 [Shewanella sp. MR-4]
          Length = 300

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 100/251 (39%), Gaps = 33/251 (13%)

Query: 41  GVGGGLVMVPVLSK-AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
           G GGG++ +PV S   F  +    +  M    G + G I+ +    +  H  H       
Sbjct: 67  GAGGGVIFIPVFSSLNFSEVQSVSTSFMIQCFGMTAGAISWSDY--YRRHHHHD------ 118

Query: 100 LKDWIFVLP-----ITTVVTSLMISHV----DKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
            K W   +P      T  V  L  S +      S L+ +F++F +++GI ++   +    
Sbjct: 119 -KTWSGFIPSILLAATCSVLGLWSSQLWQLNSPSSLHTSFSLFSIVLGIAIIISSQRRTL 177

Query: 151 RKFPDNYVKYIWGMVTGFLSGA----LGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
           +    N + Y W  V G+L G     L VG G    + ++  G     A A    VSA+ 
Sbjct: 178 QSHRLNALDYCWLAVIGYLGGIITAWLSVGVGELLVIYLMLRGVCAKMAVAIGVVVSAIT 237

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
            + A  + +++          S        VL   P +I+   LA KL+  +  K L + 
Sbjct: 238 VWSASPIHVFA----------SSSHALFELVLFAGPGAIIGGLLARKLALFLPVKTLKLF 287

Query: 267 FSMIMFTTSFV 277
           FS  +  T FV
Sbjct: 288 FSSWIILTGFV 298


>gi|288932751|ref|YP_003436811.1| hypothetical protein Ferp_2428 [Ferroglobus placidus DSM 10642]
 gi|288894999|gb|ADC66536.1| protein of unknown function DUF81 [Ferroglobus placidus DSM 10642]
          Length = 247

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 23/179 (12%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V  F  G L GL G+GGG +M P    A   +GI       VA+GT L   + T   + +
Sbjct: 5   VLGFFVGFLVGLTGMGGGALMTP----ALIFLGIPPV----VAVGTDLLYNSITRFFATV 56

Query: 88  EHRRHGTINMKILKDWIFVL----PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            H + G +N+K     +F+L    P   + T LM+  V+   +N    +   ++ ++++ 
Sbjct: 57  FHFKRGNVNVK---ASVFLLSGAIPGLALSTFLMLFVVENYGVNYLDILLTRVLALVLII 113

Query: 144 RDRLYCERKF--------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
                  + F        P N +  + G V GFL     VG G+   L +L +   I K
Sbjct: 114 SSTATIYKTFFGKKSDEIPKNSLLILIGFVVGFLVQLTSVGSGVLVTLFLLIFTGMISK 172


>gi|81300222|ref|YP_400430.1| hypothetical protein Synpcc7942_1413 [Synechococcus elongatus PCC
           7942]
 gi|81169103|gb|ABB57443.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 251

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 9/115 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++   L G L+GLFG+GGG +MVP+      LMG+     +  A+ TSLGVI  T+  +
Sbjct: 136 VLITGALGGVLAGLFGIGGGTLMVPL---QVLLMGVP----IKTAVQTSLGVIIVTACSA 188

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTV-VTSLMISHVDKSFLNKAFAIFCLLMGI 139
              +   G + + +   W+ +  +  V VT+ ++  +    + + F +  L  GI
Sbjct: 189 LSGYAVAGDV-LWVQGFWLGLGGLLGVQVTTRLLPKLPAVLVQRCFQLLLLSFGI 242


>gi|323491017|ref|ZP_08096209.1| hypothetical protein VIBR0546_20705 [Vibrio brasiliensis LMG 20546]
 gi|323314681|gb|EGA67753.1| hypothetical protein VIBR0546_20705 [Vibrio brasiliensis LMG 20546]
          Length = 259

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 18/186 (9%)

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI---LMLKRDRL 147
           R+G +++K ++  I    I + V +  + ++D   L     I  + + +   LM K  + 
Sbjct: 67  RNGIVSIKEMRLAIVCTFIGSAVGAEAVQYIDAGVLTSLIPILLVAISLYFLLMPKTRQH 126

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALI 206
             E K  +    +  G   GF  G  G G G IFT   +     S+  ATA +  ++   
Sbjct: 127 SGEAKISEAMFAFSVGSGVGFYDGFFGPGTGSIFTVCFVALGHFSLVDATARTKVLNFTS 186

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILPISILITPLATKLSYM 257
              ALL  I     L GLP W LG V          +GA +++      I PL   +S +
Sbjct: 187 NIAALLFFI-----LAGLPVWELGLVMAIGGFIGAQLGAKVVVTKGQKWIRPLVITMSML 241

Query: 258 IGKKYL 263
           +  K L
Sbjct: 242 MALKLL 247


>gi|294650946|ref|ZP_06728289.1| hypothetical protein HMP0015_2498 [Acinetobacter haemolyticus ATCC
           19194]
 gi|292823163|gb|EFF82023.1| hypothetical protein HMP0015_2498 [Acinetobacter haemolyticus ATCC
           19194]
          Length = 254

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 24/206 (11%)

Query: 20  VDYICLIIVA--SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
           +D   LII+   +F  G +    G GGGLV +P L  A     I         +GT+   
Sbjct: 2   IDETTLIILGLFAFCGGLIDAAVG-GGGLVQIPALLHALPQHSIAT------VLGTNKLA 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +   +  SF  +        K+L   +    +   + ++ I+H+ K F+  +     ++M
Sbjct: 55  VWAGTASSFFRYVNKVKFVWKLLIPTMLSAFVFAFIGAMSIAHIPKQFMTYSVLFLLIIM 114

Query: 138 GIL-MLKRD------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF--- 187
            +   LK+D       + C  K  + ++  ++G V GF  G  G G G F  LL LF   
Sbjct: 115 AVYTFLKKDLGAYSTNIKCGHK--EIFLGIVFGGVIGFYDGIFGPGSGSF--LLFLFVKV 170

Query: 188 YGASIYKATATSAGVSALIAFPALLV 213
           +G     A+A SA V  L  F A L+
Sbjct: 171 FGFDFLSASA-SAKVVNLGTFSAALL 195


>gi|193084351|gb|ACF10008.1| hypothetical protein [uncultured marine crenarchaeote
           SAT1000-49-D2]
          Length = 252

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 19/71 (26%)

Query: 16  KDCVVDYICLIIV----ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
           ++  +D   L++V    ASF +G +S LFG+GGGL+ VP+               M VA+
Sbjct: 121 EEKPIDVSHLLLVFSAGASFFAGIISSLFGIGGGLIFVPL---------------MVVAL 165

Query: 72  GTSLGVIAPTS 82
           G S+   APTS
Sbjct: 166 GISMKRAAPTS 176


>gi|148825537|ref|YP_001290290.1| hypothetical protein CGSHiEE_02260 [Haemophilus influenzae PittEE]
 gi|229847373|ref|ZP_04467474.1| hypothetical protein CGSHi7P49H1_00745 [Haemophilus influenzae
           7P49H1]
 gi|148715697|gb|ABQ97907.1| hypothetical protein CGSHiEE_02260 [Haemophilus influenzae PittEE]
 gi|229809699|gb|EEP45424.1| hypothetical protein CGSHi7P49H1_00745 [Haemophilus influenzae
           7P49H1]
 gi|309972680|gb|ADO95881.1| Putative permease YcfA [Haemophilus influenzae R2846]
          Length = 255

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 45/267 (16%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV----AMG 72
           D  +D + ++    F++  +  + G GGGL+ +P    A  + G+  ++ +      AMG
Sbjct: 2   DIGIDLLAILFCVGFVASFIDAIAG-GGGLITIP----ALLMTGMPPAMALGTNKLQAMG 56

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            +L     ++ + F+  R     ++  +  W+F   + + + +L+I  +D +   K    
Sbjct: 57  GAL-----SASLYFLRKRAVNLRDIWFILIWVF---LGSALGTLLIQSIDMAIFKKILPF 108

Query: 133 FCLLMGILMLKRDRL-YCERKFPDNYVKYIWGMVT----GFLSGALGVG-GGIFTNLLML 186
             L +G+  L   +L   +RK   +Y+  ++G++     GF  G  G G G I +   + 
Sbjct: 109 LILAIGLYFLFTPKLGDKDRKQRLSYM--LFGLLVSPFLGFYDGFFGPGTGSIMSLACVT 166

Query: 187 FYGASIYKATATSAGV---SALIAFPALLVRIYSGWGLNGLPPWSLGFV---------NI 234
             G ++ KATA +  +   S L +F   L        L G   W +GFV         N+
Sbjct: 167 LLGFNLPKATAHAKVMNFTSNLASFALFL--------LGGQILWKVGFVMMAGSILGANL 218

Query: 235 GAVLIILPISILITPLATKLSYMIGKK 261
           GA +++     LI P+   +S+M+  K
Sbjct: 219 GAKMVMTKGKTLIRPMVVIMSFMMTAK 245


>gi|225010824|ref|ZP_03701292.1| protein of unknown function DUF81 [Flavobacteria bacterium
           MS024-3C]
 gi|225005032|gb|EEG42986.1| protein of unknown function DUF81 [Flavobacteria bacterium
           MS024-3C]
          Length = 266

 Score = 38.1 bits (87), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 19/127 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +I++   + G L+G+ G GGG +++P L        +   + M  A+ TSL +IA  S+ 
Sbjct: 151 MIVLEGGVVGVLTGIVGAGGGFLIIPALV-------LFAKLPMKKAVATSLLIIAIKSLF 203

Query: 85  SFMEHRRHGTINMKILKDWIF-----VLPITTVVTSLMISH-VDKSFLNKAFAIFCLLMG 138
            F+   +       I+ DW+F     +L I  +   + +S  +    L K+F  F LLMG
Sbjct: 204 GFIGDVQ------TIVIDWMFLGSFTLLSIAGIFLGIYLSKFIPGHKLKKSFGWFVLLMG 257

Query: 139 ILMLKRD 145
           + ++ ++
Sbjct: 258 VYIMYKE 264


>gi|297617398|ref|YP_003702557.1| hypothetical protein Slip_1219 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145235|gb|ADI01992.1| protein of unknown function DUF81 [Syntrophothermus lipocalidus DSM
           12680]
          Length = 119

 Score = 38.1 bits (87), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 12/125 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV- 77
           ++ Y+ L +VA    G LSGL G+ GG+V++P L   F             A GT+L + 
Sbjct: 3   IIMYVALGLVA----GVLSGLLGIAGGIVIIPSLVFLF-------GFSQQQAQGTTLALM 51

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           + P  +++   + + G +++K        + +  +  + + + +  S L K F +  LL+
Sbjct: 52  VPPIGILAAWTYYQKGFVDLKAAGLICLGVFVGGLFGARIATALPASALQKVFGVLVLLV 111

Query: 138 GILML 142
           GI M+
Sbjct: 112 GIKMI 116


>gi|89257191|ref|YP_514553.1| hypothetical protein FTL_1954 [Francisella tularensis subsp.
           holarctica LVS]
 gi|89145022|emb|CAJ80393.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. holarctica LVS]
          Length = 108

 Score = 38.1 bits (87), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 45/84 (53%)

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
           G  I KA  TS  ++  I+    +  I  GW  + LPP+S+G++N+   L+ L  S++  
Sbjct: 17  GLDIRKAIVTSTIITFFISLVMSIFFISFGWHASNLPPYSIGYLNLIIFLVGLIPSLIGV 76

Query: 249 PLATKLSYMIGKKYLTIGFSMIMF 272
            +  K +    +KYL I + ++MF
Sbjct: 77  NIGVKATASFPQKYLQIIYILMMF 100


>gi|54309521|ref|YP_130541.1| hypothetical protein PBPRA2354 [Photobacterium profundum SS9]
 gi|46913957|emb|CAG20739.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 256

 Score = 38.1 bits (87), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 112/261 (42%), Gaps = 29/261 (11%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV-AMGTSL 75
           D   + + L+ + + L+G +  + G GGG++ VP L      +G+  +  +    +  S 
Sbjct: 2   DLSFEILGLLFLVAGLAGFIDAIAG-GGGMITVPALLA----VGVPPAQALATNKLQGSF 56

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
           G     S  + +   R+G +N+K +++ I    I + + ++++  +D   L     +  +
Sbjct: 57  G-----SFSASLYFVRNGFVNLKDMRNAIVFTFIGSAIGAVLVQRIDAGVLTSLIPVLLV 111

Query: 136 LMGILML---KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGAS 191
            + +  L   +  +     K  +N   +  G   GF  G  G G G +FT   +      
Sbjct: 112 CISLYFLFAPQTGKGGGTPKLSENAFAFSVGTSIGFYDGFFGPGAGSLFTVCFVAIAQFG 171

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILP 242
           + +ATA +  ++    F ALL  I     + GLP W +G +          +GA ++I  
Sbjct: 172 LVEATARTKILNFTSNFAALLFFI-----MAGLPIWEIGLLMAVGGFIGARMGAKVVISK 226

Query: 243 ISILITPLATKLSYMIGKKYL 263
              LI P+   +S ++  K L
Sbjct: 227 GQKLIRPMVVIISMVMAIKLL 247


>gi|75762473|ref|ZP_00742337.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74490046|gb|EAO53398.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 195

 Score = 38.1 bits (87), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 80  LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 132

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 133 SSATHISLGNVS------WIYAL 149



 Score = 35.8 bits (81), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 26/103 (25%)

Query: 123 KSFLNKA-----FAIFCLLMGILMLKRDRL---------YCERKFPDN-----------Y 157
             FLN+      F IF + + IL++ RD+L           +R F DN           +
Sbjct: 20  NKFLNQDTFSLYFGIFLIFVSILLMLRDKLKPLSLSNTSVIKRSFTDNDGNAVHYQFPPF 79

Query: 158 VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
           +      + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 80  LAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 122


>gi|291521836|emb|CBK80129.1| Predicted permeases [Coprococcus catus GD/7]
          Length = 239

 Score = 38.1 bits (87), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 24/158 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +IVA+  +  + G+ G    LV   +LS +F  + I     M + +G       P +V+ 
Sbjct: 4   LIVATLAASFIKGVCGFANTLVFTTILSFSFNNIQITP---MDLIIGY------PANVII 54

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVT------SLMISHVDKSFLNKAFAIFCLLMGI 139
             + RR          +W   LP+  ++         M+ +VD   +   F  F + MGI
Sbjct: 55  AWKERRQ--------INWRISLPVAALIIFGNIPGIFMLKNVDTRTIKVIFGFFIIAMGI 106

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
            ML R+R   ++K     +  I G+++G   G  GVG 
Sbjct: 107 EMLMRERAGKKQKQSKIILGLI-GVLSGLCCGLYGVGA 143


>gi|116624708|ref|YP_826864.1| hypothetical protein Acid_5632 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227870|gb|ABJ86579.1| protein of unknown function DUF81 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 281

 Score = 38.1 bits (87), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 13/144 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++  L+ + S ++G +  L G+GGG ++VP+L+  F   G+D    +  A+G SL  +  
Sbjct: 7   EFSALLGLGSLVTGIIGALTGLGGGFIVVPLLTLCF---GVD----IRYAIGASLICVIA 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITT---VVTSLMISHVDKSFLNKAFAIFCLLM 137
           TS  +   + R G  N+++    +F+   TT   V+ + +   V    +     +  L  
Sbjct: 60  TSTGAAARYVRGGYPNIRL---GMFLELATTGGAVLGAFLAPKVPTPVIGALCGVVLLYA 116

Query: 138 GILMLKRDRLYCERKFPDNYVKYI 161
            +L L+R         PD    ++
Sbjct: 117 SLLTLRRTSEQVSTAVPDRVAAWL 140


>gi|271501312|ref|YP_003334337.1| hypothetical protein Dd586_2792 [Dickeya dadantii Ech586]
 gi|270344867|gb|ACZ77632.1| protein of unknown function DUF81 [Dickeya dadantii Ech586]
          Length = 266

 Score = 38.1 bits (87), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 110/257 (42%), Gaps = 33/257 (12%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D + L+ +AS ++G +  + G GGGL+ +PVL  A    G+  +    V     L  +  
Sbjct: 9   DILALLFLASVIAGFVDSIAG-GGGLLSIPVLLAA----GLSPA---QVLATNKLQAVGG 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPIT---TVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +   S    RR   ++MKIL+     +P+T    V  + +I  +   FL K   +  + +
Sbjct: 61  SFSASLYFMRRK-AVDMKILR---LTVPLTFLGAVFGAWLIQQIHADFLRKLLPVLVIGI 116

Query: 138 GILMLKRDRLYCERKFPDNYV---KYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIY 193
           G+  L   ++  E +     +     + G   GF  G  G G G F  L  +   G ++ 
Sbjct: 117 GLYFLLMPKVGGEDRHARLSLLPFSLLGGACVGFYDGFFGPGAGSFYALAYVTLLGFNLA 176

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILPIS 244
           KATA +  ++    F +LL  +     L G   W +G V          +GA +++    
Sbjct: 177 KATAHAKVLNFTSNFGSLLFFM-----LGGQVVWGVGLVMLVGQIIGARLGARMVLTKGQ 231

Query: 245 ILITPLATKLSYMIGKK 261
            LI P+   +S ++  K
Sbjct: 232 KLIRPMLVVMSALMSIK 248


>gi|283832241|ref|ZP_06351982.1| inner membrane protein YfcA [Citrobacter youngae ATCC 29220]
 gi|291071882|gb|EFE09991.1| inner membrane protein YfcA [Citrobacter youngae ATCC 29220]
          Length = 269

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 19/182 (10%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           + L+G +  L G GGGL+ +P L  A    G+  +   H A+ T+       S+ S +  
Sbjct: 22  AMLAGFIDSLAG-GGGLLTIPALMAA----GMPPA---H-ALATNKLQACGGSISSSLYF 72

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML------K 143
            R G +N+   K  IF+  I ++  +L++ HV    L +   +  + +G+  L      +
Sbjct: 73  IRQGVVNLADQKLNIFMTFIGSMSGALLVQHVQSDILRQILPVLVICIGLYFLLMPKVGE 132

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGV 202
            DR   +R+        + G   GF  G  G   G F  L  ++  G ++ K+TA +  +
Sbjct: 133 EDR---QRRLHGLPFALVAGGCVGFYDGFFGPAAGSFYALCFVMLCGYNLAKSTAHAKVL 189

Query: 203 SA 204
           +A
Sbjct: 190 NA 191


>gi|307131866|ref|YP_003883882.1| hypothetical protein Dda3937_00495 [Dickeya dadantii 3937]
 gi|306529395|gb|ADM99325.1| conserved inner membrane protein [Dickeya dadantii 3937]
          Length = 266

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 27/254 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D + L+ +AS ++G +  + G GGGL+ +PVL  A    G+  +  +      ++G    
Sbjct: 9   DVLALLFLASVIAGFVDSIAG-GGGLLSIPVLLAA----GLSPAQVLATNKLQAVG---- 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S+ + +   R   ++MKILK  + +  +  +  + +I  +   FL K   +  + +G+ 
Sbjct: 60  GSLSASLYFIRRKAVDMKILKLAVPLTFVGAMFGAWLIQQIHADFLRKLLPVLVIGIGLY 119

Query: 141 MLKRDRLYCERKFPDNYV---KYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
            L   ++  E +     +     + G   GF  G  G G G F  L  +   G ++ KAT
Sbjct: 120 FLLMPKVGDEDRHARMSLLPFSLLGGASVGFYDGFFGPGAGSFYALAYVTLLGFNLAKAT 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILPISILI 247
           A +  ++    F +LL  +     L G   W +G V          +GA +++     LI
Sbjct: 180 AHAKVLNFTSNFGSLLFFM-----LGGQVVWGVGLVMLVGQIIGARLGARMVLTKGQKLI 234

Query: 248 TPLATKLSYMIGKK 261
            P+   +S ++  K
Sbjct: 235 RPMLVIMSALMSIK 248


>gi|221133534|ref|ZP_03559839.1| hypothetical protein GHTCC_01274 [Glaciecola sp. HTCC2999]
          Length = 289

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 8/126 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I LI V     G ++G+ G GGG +++P L     LMG+     M  A+G SL +IA  S
Sbjct: 171 ILLIAVEGAFVGVITGVLGAGGGFLIIPAL---VLLMGMP----MKKAVGASLFIIALKS 223

Query: 83  VMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ F    + G  +++ +L   +    I   ++  +  +++   L K FA F L + + +
Sbjct: 224 LIGFTGDLQSGIDLDIPLLGMMLLATFIGMTISKKIAGNLEGQTLQKFFAYFTLAIAVFI 283

Query: 142 LKRDRL 147
           + ++ L
Sbjct: 284 IVKEIL 289


>gi|317132465|ref|YP_004091779.1| protein of unknown function DUF81 [Ethanoligenens harbinense
           YUAN-3]
 gi|315470444|gb|ADU27048.1| protein of unknown function DUF81 [Ethanoligenens harbinense
           YUAN-3]
          Length = 257

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 17/171 (9%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +A  TSL    PT+ +    H + G +  +     +    I  +  SL  S + ++  N+
Sbjct: 43  IAASTSLATTIPTTAVGTFSHWKAGNVRFRFGLTMLAGGVIGAIAGSLCSSLLPQNLYNR 102

Query: 129 AFAIFCLLMGILML--------KRDRLYCER-KFPDNYVKYI-WGMVTGFLSGALGVGGG 178
              I  +L+ + ML        K+  +  ER +   N VK I +G++ G +SG +G+ GG
Sbjct: 103 LTGIILVLLAVQMLIAFLRKRHKKAEVEKERQRNTSNMVKAIGFGLLGGVMSGMVGLSGG 162

Query: 179 --IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG---WGLNGL 224
             I   L++L  G    +   TS  V   IA       +  G   WGL GL
Sbjct: 163 GPIVAGLMLL--GCQALETVGTSVLVLLGIAVTGFAAHLSMGNIDWGLVGL 211


>gi|13541475|ref|NP_111163.1| permease [Thermoplasma volcanium GSS1]
 gi|14324859|dbj|BAB59785.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 278

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 7/110 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+G  SG FG+GGG ++VP L     L   D  I M++A+GTSL  +    +++ + +  
Sbjct: 167 LAGFASGYFGIGGGFLIVPAL-----LYSAD--ITMNIAVGTSLLSVGTFGLVTALRYGI 219

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            G + + I   ++          + + + + +S L + F+I  +++GI M
Sbjct: 220 AGEVLVPIALLYVLGGIFGGFAGARVSTSMKRSTLRRFFSIIIVVVGIYM 269


>gi|326202549|ref|ZP_08192417.1| protein of unknown function DUF81 [Clostridium papyrosolvens DSM
           2782]
 gi|325987133|gb|EGD47961.1| protein of unknown function DUF81 [Clostridium papyrosolvens DSM
           2782]
          Length = 123

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 7/110 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  +GLFG GGG + VP +    +    +D    H A  T+L +I P +++S   +  H
Sbjct: 20  AGVANGLFGSGGGTIAVPAMVFLLE----EDE---HKAHATALLIILPLTLVSTYFYLSH 72

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +N  I    +    +   + + +++      L K F IF +L  I M+
Sbjct: 73  NYVNWNITWKAMTGGVMGGAIGAFLLNKCPSKILRKIFGIFMILAAIRMI 122


>gi|217959028|ref|YP_002337576.1| hypothetical protein BCAH187_A1613 [Bacillus cereus AH187]
 gi|217067391|gb|ACJ81641.1| putative membrane protein [Bacillus cereus AH187]
          Length = 266

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 151 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 203

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 204 SSATHISLGNVS------WIYAL 220



 Score = 37.7 bits (86), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 29/200 (14%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +YI L+ +   ++GT+  L G+GGG+++VP+      L+G+  S+   +A+GTS+  +  
Sbjct: 2   EYIMLLFIG-LIAGTVGSLVGLGGGIIIVPL------LIGL-HSLSPQLAVGTSMVTVVF 53

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T + S + + +H  ++ K             ++ S     + +   +  F IF + + IL
Sbjct: 54  TGLSSTLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLKQDTFSLYFGIFLIFVSIL 113

Query: 141 MLKRDRL---------YCERKFPDNY---VKYIW--------GMVTGFLSGALGVGGG-I 179
           ++ RD+L           +R F DN    V Y +          + GF+SG  G+GGG +
Sbjct: 114 LMLRDKLKPLSLSNMTVIKRSFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGIGGGAL 173

Query: 180 FTNLLMLFYGASIYKATATS 199
               +ML +    + A ATS
Sbjct: 174 LVPAMMLLFAFPAHIAVATS 193


>gi|156973621|ref|YP_001444528.1| hypothetical protein VIBHAR_01324 [Vibrio harveyi ATCC BAA-1116]
 gi|156525215|gb|ABU70301.1| hypothetical protein VIBHAR_01324 [Vibrio harveyi ATCC BAA-1116]
          Length = 263

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 17/173 (9%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM--HVAMGTSLGVIAPTSVMSF 86
            S ++ TL+ L G G GL+  P+L      +G+  S+ +  H     +LG+ A ++    
Sbjct: 24  GSLVANTLASLSGGGAGLLQFPLLI----FLGLPFSVALGTHKVASVALGLGAAST---- 75

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-MLKRD 145
             H + GTI  KI    I V  I  V+ + +I  +      K      L +GI    K++
Sbjct: 76  --HLKAGTIKPKIALYLILVGSIGVVIGANLIVQISDDIAEKMLGAMILALGIYSRFKKE 133

Query: 146 RLYCERKFPDNYVKYIWG----MVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
               E     + + +I G    M+ G ++G+L  G G+   L ++ +    YK
Sbjct: 134 LGQVELAIHRDTLGWIIGGLGLMLIGVVNGSLTAGSGLLVTLFLVRWFGYDYK 186


>gi|56421519|ref|YP_148837.1| hypothetical protein GK2984 [Geobacillus kaustophilus HTA426]
 gi|56381361|dbj|BAD77269.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 300

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 4/70 (5%)

Query: 24 CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI---AP 80
           L+++  F++GT+  L G+GGG+++VP L   F  +G   ++   VA+GTSL VI     
Sbjct: 4  ALLVLIGFIAGTVGSLAGLGGGVIIVPSL-LFFGALGWLSAVTPQVAVGTSLVVIIFNGL 62

Query: 81 TSVMSFMEHR 90
          +S +S+M+ +
Sbjct: 63 SSTLSYMKDK 72


>gi|228900131|ref|ZP_04064364.1| hypothetical protein bthur0014_13380 [Bacillus thuringiensis IBL
           4222]
 gi|228907182|ref|ZP_04071044.1| hypothetical protein bthur0013_13530 [Bacillus thuringiensis IBL
           200]
 gi|228964521|ref|ZP_04125633.1| hypothetical protein bthur0004_13680 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228795223|gb|EEM42717.1| hypothetical protein bthur0004_13680 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228852514|gb|EEM97306.1| hypothetical protein bthur0013_13530 [Bacillus thuringiensis IBL
           200]
 gi|228859537|gb|EEN03964.1| hypothetical protein bthur0014_13380 [Bacillus thuringiensis IBL
           4222]
          Length = 262

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 147 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 199

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 200 SSATHISLGNVS------WIYAL 216



 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 38/180 (21%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+      L+G+  S+   +A+GTS+  +  T + S + + +H  ++ K       
Sbjct: 22  IIIVPL------LIGL-HSLSPQLAVGTSMVTVVFTGLSSTLTYMKHKRVDYK----SGL 70

Query: 106 VLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILMLKRDRL---------YCER 151
           +L I +    ++ S  +K FLN+      F IF + + IL++ RD+L           +R
Sbjct: 71  ILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLIFVSILLMLRDKLKPLSLSNTSVIKR 129

Query: 152 KFPDN-----------YVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            F DN           ++      + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 130 SFTDNDGNAVHYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 189


>gi|229845190|ref|ZP_04465324.1| hypothetical protein CGSHi6P18H1_03036 [Haemophilus influenzae
           6P18H1]
 gi|229811901|gb|EEP47596.1| hypothetical protein CGSHi6P18H1_03036 [Haemophilus influenzae
           6P18H1]
          Length = 255

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 45/267 (16%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV----AMG 72
           D  +D + ++    F++  +  + G GGGL+ +P    A  + G+  ++ +      AMG
Sbjct: 2   DIGIDLLAILFCVGFVASFIDAIAG-GGGLITIP----ALLMTGMPPAMALGTNKLQAMG 56

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            +L     ++ + F+  R     ++  +  W+F   + + + +L+I  +D +   K    
Sbjct: 57  GAL-----SASLYFLRKRAVNLRDIWFILIWVF---LGSALGTLLIQSIDVAIFRKILPF 108

Query: 133 FCLLMGILMLKRDRL-YCERKFPDNYVKYIWGMVT----GFLSGALGVG-GGIFTNLLML 186
             L++G+  L   +L   +RK   +Y+  ++G++     GF  G  G G G I +   + 
Sbjct: 109 LILVIGLYFLFTPKLGDKDRKQRLSYL--LFGLLVSPFLGFYDGFFGPGTGSIMSLACVT 166

Query: 187 FYGASIYKATATSAGV---SALIAFPALLVRIYSGWGLNGLPPWSLGFV---------NI 234
             G ++ KAT+ +  +   S L +F   L        L+G   W +GFV         N+
Sbjct: 167 LLGFNLPKATSHAKVMNFTSNLASFTLFL--------LSGQILWKVGFVMMAGSILGANL 218

Query: 235 GAVLIILPISILITPLATKLSYMIGKK 261
           GA +++     LI P+   +S+M+  K
Sbjct: 219 GAKMVMTKGKTLIRPMVVIMSFMMTAK 245


>gi|226951426|ref|ZP_03821890.1| transmembrane protein [Acinetobacter sp. ATCC 27244]
 gi|226837848|gb|EEH70231.1| transmembrane protein [Acinetobacter sp. ATCC 27244]
          Length = 254

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 24/206 (11%)

Query: 20  VDYICLIIVA--SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
           +D   LII+   +F  G +    G GGGLV +P L  A     I         +GT+   
Sbjct: 2   IDETTLIILGLFAFCGGLIDAAVG-GGGLVQIPALLHALPQHSIA------TVLGTNKLA 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +   +  SF  +        K+L   +    +   + ++ I+H+ K F+  +     ++M
Sbjct: 55  VWAGTASSFFRYVHKVKFVWKLLIPTMLSAFVFAFIGAMSIAHIPKQFMTYSVLFLLIIM 114

Query: 138 GIL-MLKRD------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF--- 187
            +   LK+D       + C  K  + ++  ++G V GF  G  G G G F  LL LF   
Sbjct: 115 AVYTFLKKDLGAYSTDIKCGHK--EIFLGIVFGGVIGFYDGIFGPGSGSF--LLFLFVKV 170

Query: 188 YGASIYKATATSAGVSALIAFPALLV 213
           +G     A+A SA V  L  F A L+
Sbjct: 171 FGFDFLSASA-SAKVVNLGTFSAALL 195


>gi|223939838|ref|ZP_03631708.1| protein of unknown function DUF81 [bacterium Ellin514]
 gi|223891526|gb|EEF58017.1| protein of unknown function DUF81 [bacterium Ellin514]
          Length = 268

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 16/161 (9%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +PV         +   +    A+GT+       S  +   + R G ++++    
Sbjct: 36  GGGLITLPVW--------LSVGMPPQYALGTNKLQATFGSGSAAWHYTRAGIVSLRECSL 87

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL--MLKRDRLYCERKFP--DNYV 158
            +F   I     ++++  +D SFL +   +  LL+GI+  ++ + R+  +   P   N  
Sbjct: 88  GVFFTLIGAAAGTVLVQKLDPSFLKRFIPV--LLLGIVAYIIFKPRIGDKDVHPRISNKP 145

Query: 159 KYI-WGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATA 197
            YI +G+V GF  G  G G G ++T  LML  G ++ KATA
Sbjct: 146 FYIIFGLVLGFYDGFFGPGAGSLWTMALMLGLGFNLTKATA 186


>gi|229029228|ref|ZP_04185321.1| hypothetical protein bcere0028_13250 [Bacillus cereus AH1271]
 gi|228732136|gb|EEL83025.1| hypothetical protein bcere0028_13250 [Bacillus cereus AH1271]
          Length = 262

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 147 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 199

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 200 SSATHISLGNVS------WIYAL 216



 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 38/180 (21%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+      L+G+  S+   +A+GTS+  +  T + S + + +H  ++ K       
Sbjct: 22  IIIVPL------LIGL-HSLSPQLAVGTSMVTVVFTGLSSTLTYMKHKRVDYK----SGL 70

Query: 106 VLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILMLKRDRL---------YCER 151
           +L I +    ++ S  +K FLN+      F IF + + IL++ RD+L           +R
Sbjct: 71  ILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLIFVSILLMLRDKLNPLSLSNMTVIKR 129

Query: 152 KFPDNY---VKYIW--------GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            F DN    V Y +          + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 130 SFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 189


>gi|228920261|ref|ZP_04083609.1| hypothetical protein bthur0011_12770 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228951928|ref|ZP_04114026.1| hypothetical protein bthur0006_13420 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|229043292|ref|ZP_04191013.1| hypothetical protein bcere0027_13440 [Bacillus cereus AH676]
 gi|229109007|ref|ZP_04238608.1| hypothetical protein bcere0018_12800 [Bacillus cereus Rock1-15]
 gi|229126866|ref|ZP_04255878.1| hypothetical protein bcere0015_13230 [Bacillus cereus BDRD-Cer4]
 gi|229177959|ref|ZP_04305331.1| hypothetical protein bcere0005_13220 [Bacillus cereus 172560W]
 gi|229189632|ref|ZP_04316647.1| hypothetical protein bcere0002_13100 [Bacillus cereus ATCC 10876]
 gi|228593896|gb|EEK51700.1| hypothetical protein bcere0002_13100 [Bacillus cereus ATCC 10876]
 gi|228605447|gb|EEK62896.1| hypothetical protein bcere0005_13220 [Bacillus cereus 172560W]
 gi|228656806|gb|EEL12632.1| hypothetical protein bcere0015_13230 [Bacillus cereus BDRD-Cer4]
 gi|228674476|gb|EEL29719.1| hypothetical protein bcere0018_12800 [Bacillus cereus Rock1-15]
 gi|228726049|gb|EEL77285.1| hypothetical protein bcere0027_13440 [Bacillus cereus AH676]
 gi|228807851|gb|EEM54372.1| hypothetical protein bthur0006_13420 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228839460|gb|EEM84753.1| hypothetical protein bthur0011_12770 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 262

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 147 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 199

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 200 SSATHISLGNVS------WIYAL 216



 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 38/180 (21%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+      L+G+  S+   +A+GTS+  +  T + S + + +H  ++ K       
Sbjct: 22  IIIVPL------LIGL-HSLSPQLAVGTSMVTVVFTGLSSTLTYMKHKRVDYK----SGL 70

Query: 106 VLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILMLKRDRL---------YCER 151
           +L I +    ++ S  +K FLN+      F IF + + IL++ RD+L           +R
Sbjct: 71  ILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLIFVSILLMLRDKLKPLSLSNTSVIKR 129

Query: 152 KFPDN-----------YVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            F DN           ++      + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 130 SFTDNDGNTVHYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 189


>gi|222095183|ref|YP_002529243.1| hypothetical protein BCQ_1523 [Bacillus cereus Q1]
 gi|229195750|ref|ZP_04322512.1| hypothetical protein bcere0001_13150 [Bacillus cereus m1293]
 gi|221239241|gb|ACM11951.1| membrane protein, putative [Bacillus cereus Q1]
 gi|228587756|gb|EEK45812.1| hypothetical protein bcere0001_13150 [Bacillus cereus m1293]
          Length = 262

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 147 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 199

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 200 SSATHISLGNVS------WIYAL 216



 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 38/180 (21%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+      L+G+  S+   +A+GTS+  +  T + S + + +H  ++ K       
Sbjct: 22  IIIVPL------LIGL-HSLSPQLAVGTSMVTVVFTGLSSTLTYMKHKRVDYK----SGL 70

Query: 106 VLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILMLKRDRL---------YCER 151
           +L I +    ++ S  +K FLN+      F IF + + IL++ RD+L           +R
Sbjct: 71  ILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLIFVSILLMLRDKLKPLSLSNMTVIKR 129

Query: 152 KFPDNY---VKYIW--------GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            F DN    V Y +          + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 130 SFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 189


>gi|157374704|ref|YP_001473304.1| hypothetical protein Ssed_1565 [Shewanella sediminis HAW-EB3]
 gi|157317078|gb|ABV36176.1| protein of unknown function DUF81 [Shewanella sediminis HAW-EB3]
          Length = 257

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 29/186 (15%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS-LGVIAPTSVMSFMEHRRHGTINMKILK 101
           GGGL+ +P L        +   I  H+A+GT+ L     +S+ +F  +R+    N+    
Sbjct: 29  GGGLLSIPAL--------LTVGIPPHLALGTNKLAACFGSSMAAFTYYRK----NLFTPN 76

Query: 102 DWIFVLPIT---TVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCE-----RK 152
            W      T    V  + ++  +DKS+L K   +  +++ I  +LK + + C      RK
Sbjct: 77  LWYHTFIATFIGAVSGTFIVYLIDKSWLEKWLPVIIIVIAIYTLLKPNAMGCTSFTPLRK 136

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-------LMLFYGASIYKATATSAGVSAL 205
                 +++ G++ GF  G  G G G F  +       L L +   + +A   ++ +++L
Sbjct: 137 PATAVKQWLQGVILGFYDGFAGPGTGAFWTISSTTYHRLPLLHSCGLARAMTFTSNLTSL 196

Query: 206 IAFPAL 211
           + F AL
Sbjct: 197 LIFFAL 202


>gi|47526743|ref|YP_018092.1| hypothetical protein GBAA_1470 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|47501891|gb|AAT30567.1| putative membrane protein [Bacillus anthracis str. 'Ames Ancestor']
          Length = 262

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 147 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 199

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 200 SSATHISLGNVS------WIYAL 216



 Score = 37.4 bits (85), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 38/180 (21%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+      L+G+  S+   +A+GTS+  +  T + S + + +H  ++ K       
Sbjct: 22  IIIVPL------LIGL-HSLSPQLAVGTSMVTVVFTGLSSTLTYMKHKRVDYK----SGL 70

Query: 106 VLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILMLKRDRL---------YCER 151
           +L I +    ++ S  +K FLN+      F IF + + IL++ RD+L           +R
Sbjct: 71  ILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLIFVSILLILRDKLKPLSLSNMTVIKR 129

Query: 152 KFPDNY---VKYIW--------GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            F DN    V Y +          + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 130 SFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 189


>gi|229138241|ref|ZP_04266837.1| hypothetical protein bcere0013_13630 [Bacillus cereus BDRD-ST26]
 gi|228645273|gb|EEL01509.1| hypothetical protein bcere0013_13630 [Bacillus cereus BDRD-ST26]
          Length = 262

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 147 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 199

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 200 SSATHISLGNVS------WIYAL 216



 Score = 36.2 bits (82), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 28/175 (16%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+      L+G+  S+   +A+GTS+  +  T + S + + +H  ++ K       
Sbjct: 22  IIIVPL------LIGL-HSLSPQLAVGTSMVTVVFTGLSSTLTYMKHKRVDYKSGLILFI 74

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL---------YCERKFPDN 156
                 ++ S     + +   +  F IF + + IL++ RD+L           +R F DN
Sbjct: 75  GSGPGGIIGSWANKFLKQDTFSLYFGIFLIFVSILLMLRDKLKPLSLSNMTVIKRSFTDN 134

Query: 157 Y---VKYIW--------GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
               V Y +          + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 135 EGNTVHYQFPPLLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 189


>gi|47569119|ref|ZP_00239807.1| hypothetical protein membrane Spanning protein [Bacillus cereus
           G9241]
 gi|52143897|ref|YP_082932.1| hypothetical protein BCZK1333 [Bacillus cereus E33L]
 gi|228914123|ref|ZP_04077743.1| hypothetical protein bthur0012_13580 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228926580|ref|ZP_04089651.1| hypothetical protein bthur0010_12980 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228932833|ref|ZP_04095703.1| hypothetical protein bthur0009_13070 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228945147|ref|ZP_04107506.1| hypothetical protein bthur0007_13120 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228984629|ref|ZP_04144804.1| hypothetical protein bthur0001_13320 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|229090506|ref|ZP_04221744.1| hypothetical protein bcere0021_13320 [Bacillus cereus Rock3-42]
 gi|229121090|ref|ZP_04250330.1| hypothetical protein bcere0016_13970 [Bacillus cereus 95/8201]
 gi|229155119|ref|ZP_04283232.1| hypothetical protein bcere0010_13120 [Bacillus cereus ATCC 4342]
 gi|229183744|ref|ZP_04310963.1| hypothetical protein bcere0004_13130 [Bacillus cereus BGSC 6E1]
 gi|47554190|gb|EAL12553.1| hypothetical protein membrane Spanning protein [Bacillus cereus
           G9241]
 gi|51977366|gb|AAU18916.1| conserved hypothetical protein; possible membrane protein [Bacillus
           cereus E33L]
 gi|228599727|gb|EEK57328.1| hypothetical protein bcere0004_13130 [Bacillus cereus BGSC 6E1]
 gi|228628404|gb|EEK85118.1| hypothetical protein bcere0010_13120 [Bacillus cereus ATCC 4342]
 gi|228662419|gb|EEL18019.1| hypothetical protein bcere0016_13970 [Bacillus cereus 95/8201]
 gi|228692856|gb|EEL46577.1| hypothetical protein bcere0021_13320 [Bacillus cereus Rock3-42]
 gi|228775156|gb|EEM23547.1| hypothetical protein bthur0001_13320 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228814523|gb|EEM60785.1| hypothetical protein bthur0007_13120 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228826883|gb|EEM72647.1| hypothetical protein bthur0009_13070 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228833168|gb|EEM78734.1| hypothetical protein bthur0010_12980 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228845576|gb|EEM90607.1| hypothetical protein bthur0012_13580 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 262

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 147 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 199

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 200 SSATHISLGNVS------WIYAL 216



 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 38/180 (21%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+      L+G+  S+   +A+GTS+  +  T + S + + +H  ++ K       
Sbjct: 22  IIIVPL------LIGL-HSLSPQLAVGTSMVTVVFTGLSSTLTYMKHKRVDYK----SGL 70

Query: 106 VLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILMLKRDRL---------YCER 151
           +L I +    ++ S  +K FLN+      F IF + + IL++ RD+L           +R
Sbjct: 71  ILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLIFVSILLMLRDKLKPLSLSNMTVIKR 129

Query: 152 KFPDNY---VKYIW--------GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            F DN    V Y +          + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 130 SFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 189


>gi|154174372|ref|YP_001408365.1| inner membrane protein YfcA [Campylobacter curvus 525.92]
 gi|153793085|gb|EAT99958.2| inner membrane protein YfcA [Campylobacter curvus 525.92]
          Length = 253

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 15/185 (8%)

Query: 21  DYICLII--VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           D++  ++  VA+FL G +  + G GGGL+ +P    A   MG+      H+A+GT+    
Sbjct: 4   DFLSYLVFFVAAFLGGFIDSIAG-GGGLITLP----AIMAMGVPP----HLALGTNKLQG 54

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA--FAIFCLL 136
           +  S  + +   + G IN K     I    I   V +++I  ++  FL     F +  + 
Sbjct: 55  SFGSFTATLNFAKKGMINFKEAGLGIVFTFIGACVGAVLILFLNPDFLRLVIPFLLIAIF 114

Query: 137 MGILMLKRDRLYCERKFPDNYVKYI-WGMVTGFLSGALGVGGGIFTNLLML-FYGASIYK 194
           +  + + +      R   D  + Y+ +GM+ GF  G  G G G F    M+   G ++ K
Sbjct: 115 VYTIFMPKVGESDRRARMDKRIFYVVFGMILGFYDGFFGPGAGSFWTFAMIALIGVNMKK 174

Query: 195 ATATS 199
           A A +
Sbjct: 175 AVAHT 179


>gi|301168850|emb|CBW28441.1| conserved inner membrane protein [Haemophilus influenzae 10810]
          Length = 255

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 45/267 (16%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV----AMG 72
           D  +D + ++    F++  +  + G GGGL+ +P    A  + G+  ++ +      AMG
Sbjct: 2   DIGIDLLAILFCVGFVASFIDAIAG-GGGLITIP----ALLMTGMPPAMALGTNKLQAMG 56

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            +L     ++ + F+  R     ++  +  W+F   + + + +L+I  +D +   K    
Sbjct: 57  GAL-----SASLYFLRKRAVNLRDIWFILIWVF---LGSALGTLLIQSIDVAIFKKMLPF 108

Query: 133 FCLLMGILMLKRDRLYCE-RKFPDNYVKYIWGMVT----GFLSGALGVG-GGIFTNLLML 186
             L +G+  L   +L  E RK   +Y+  ++G++     GF  G  G G G I +   + 
Sbjct: 109 LILAIGLYFLFTPKLGGEDRKQRLSYL--LFGLLVSPFLGFYDGFFGPGTGSIMSLACVT 166

Query: 187 FYGASIYKATATSAGV---SALIAFPALLVRIYSGWGLNGLPPWSLGFV---------NI 234
             G ++ KA A +  +   S L +F   L        L G   W +GFV         N+
Sbjct: 167 LLGFNLPKAAAHAKVMNFTSNLASFALFL--------LGGQILWKVGFVMMAGSILGANL 218

Query: 235 GAVLIILPISILITPLATKLSYMIGKK 261
           GA +++     LI P+   +S+M+  K
Sbjct: 219 GAKMVMTKGKTLIRPMVVIMSFMMTAK 245


>gi|229102153|ref|ZP_04232864.1| hypothetical protein bcere0019_13160 [Bacillus cereus Rock3-28]
 gi|228681353|gb|EEL35519.1| hypothetical protein bcere0019_13160 [Bacillus cereus Rock3-28]
          Length = 262

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 38/180 (21%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+      L+G+  S+   +A+GTS+  +  T + S + + +H  ++ K       
Sbjct: 22  IIIVPL------LIGL-HSLSPQLAVGTSMVTVVFTGLASTLTYMKHKRVDYK----SGL 70

Query: 106 VLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILMLKRDRL---------YCER 151
           +L I +    ++ S  +K FLN+      F IF + + IL++ RD+L           +R
Sbjct: 71  ILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLIFVSILLMLRDKLKPLSLSNMSVIKR 129

Query: 152 KFPDN-----------YVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            F DN           ++      + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 130 SFTDNKGNTIHYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 189



 Score = 36.6 bits (83), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 7/72 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 147 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 199

Query: 85  SFMEHRRHGTIN 96
           S   H   G ++
Sbjct: 200 SSATHISLGNVS 211


>gi|229084550|ref|ZP_04216821.1| hypothetical protein bcere0022_11850 [Bacillus cereus Rock3-44]
 gi|228698753|gb|EEL51467.1| hypothetical protein bcere0022_11850 [Bacillus cereus Rock3-44]
          Length = 262

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 38/180 (21%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+      L+G+  S+   +A+GTS+  +  T + S + + +H  ++ K       
Sbjct: 22  IIIVPL------LIGL-HSLSPQLAVGTSIVTVVFTGLSSTLTYMKHKRVDYK----SGL 70

Query: 106 VLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILMLKRDRL---------YCER 151
           +L I +    ++ S  +K FLN+      F IF + + IL++ RD+L           +R
Sbjct: 71  ILFIGSGPGGIIGSWANK-FLNQDSFSLYFGIFLIFVSILLMLRDKLKPLSLSNATVIKR 129

Query: 152 KFPD---NYVKY--------IWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            F D   N V Y        I   V GF+SG  G+GGG +    +ML +      A ATS
Sbjct: 130 SFTDAEGNTVHYQFPPFLSIIIAFVVGFISGLFGIGGGALLVPAMMLLFAFPAQIAVATS 189



 Score = 36.2 bits (82), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I+ +F+ G +SGLFG+GGG ++VP +   F       +    +A+ TS+ ++  ++++
Sbjct: 147 LSIIIAFVVGFISGLFGIGGGALLVPAMMLLF-------AFPAQIAVATSMFIVFLSAIV 199

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S + H   G ++      W++ L
Sbjct: 200 SSLTHISLGNVS------WVYAL 216


>gi|229553275|ref|ZP_04442000.1| protein of hypothetical function DUF81 [Lactobacillus rhamnosus
           LMS2-1]
 gi|258540113|ref|YP_003174612.1| permease [Lactobacillus rhamnosus Lc 705]
 gi|229313361|gb|EEN79334.1| protein of hypothetical function DUF81 [Lactobacillus rhamnosus
           LMS2-1]
 gi|257151789|emb|CAR90761.1| Conserved permease [Lactobacillus rhamnosus Lc 705]
          Length = 245

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 5/134 (3%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A  TSL    P   +    H R G +        +      TVV SL   ++ +   + +
Sbjct: 42  AAATSLFTAIPALAVGCYSHYRTGNMRFHAGNRILLTAVPATVVGSLAAPYIPELVYSWS 101

Query: 130 FAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG--IFTNLLML 186
            AI  +++G+ ML++      ++     +  Y+ GM++G + G  G+ GG  I   L+++
Sbjct: 102 IAIIFMVLGVQMLRQSFGRKAKKTTQPAWFAYVLGMISGLMVGVAGLSGGGPIMAGLMLM 161

Query: 187 FYGASIYKATATSA 200
             G  +  A ATS+
Sbjct: 162 --GLDMPHAAATSS 173


>gi|229160501|ref|ZP_04288496.1| hypothetical protein bcere0009_12930 [Bacillus cereus R309803]
 gi|228622911|gb|EEK79742.1| hypothetical protein bcere0009_12930 [Bacillus cereus R309803]
          Length = 262

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 147 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 199

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 200 SSATHISLGNVS------WIYAL 216



 Score = 37.0 bits (84), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 38/180 (21%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+      L+G+  S+   +A+GTS+  +  T + S + + +H  ++ K       
Sbjct: 22  IIIVPL------LIGL-HSLSPQLAVGTSMVTVVFTGLSSTLTYMKHKRVDYK----SGL 70

Query: 106 VLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILMLKRDRL---------YCER 151
           +L I +    ++ S  +K FLN+      F +F + + IL++ RD+L           +R
Sbjct: 71  ILFIGSGPGGIIGSWANK-FLNQDTFSLYFGVFLIFVSILLMLRDKLKPLSLSNMTVIKR 129

Query: 152 KFPDNY---VKYIW--------GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            F DN    V Y +          + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 130 SFTDNEGNTVNYQFPPLLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 189


>gi|229074741|ref|ZP_04207761.1| hypothetical protein bcere0024_12970 [Bacillus cereus Rock4-18]
 gi|229096041|ref|ZP_04227016.1| hypothetical protein bcere0020_12900 [Bacillus cereus Rock3-29]
 gi|228687426|gb|EEL41329.1| hypothetical protein bcere0020_12900 [Bacillus cereus Rock3-29]
 gi|228708381|gb|EEL60534.1| hypothetical protein bcere0024_12970 [Bacillus cereus Rock4-18]
          Length = 262

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 38/180 (21%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+      L+G+  S+   +A+GTS+  +  T + S + + +H  ++ K       
Sbjct: 22  IIIVPL------LIGL-HSLSPQLAVGTSMVTVVFTGLASTLTYMKHKRVDYK----SGL 70

Query: 106 VLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILMLKRDRL---------YCER 151
           +L I +    ++ S  +K FLN+      F IF + + IL++ RD+L           +R
Sbjct: 71  ILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLIFVSILLMLRDKLKPLSLSNMSVIKR 129

Query: 152 KFPDN-----------YVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            F DN           ++      + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 130 SFTDNKGNTVHYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 189



 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 7/72 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 147 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 199

Query: 85  SFMEHRRHGTIN 96
           S   H   G ++
Sbjct: 200 SSATHISLGNVS 211


>gi|83816202|ref|YP_444473.1| domain of unknown function, putative [Salinibacter ruber DSM 13855]
 gi|294506221|ref|YP_003570279.1| permease [Salinibacter ruber M8]
 gi|83757596|gb|ABC45709.1| Domain of unknown function, putative [Salinibacter ruber DSM 13855]
 gi|294342549|emb|CBH23327.1| Predicted permease [Salinibacter ruber M8]
          Length = 254

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 12/103 (11%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR-HGTINMKILKDWIFV 106
           +VP L        +   + MH+A+GTSL +IA  SV  F+++        + I  D + V
Sbjct: 153 IVPALV-------VLGGLSMHLAVGTSLAIIALKSVSGFVKYLDVMEAAGLSIHWDLVLV 205

Query: 107 LPITTVVTSL----MISHVDKSFLNKAFAIFCLLMGILMLKRD 145
                +V S     + ++V ++ L + FAIF +LMGI++L ++
Sbjct: 206 FSGIGIVGSFVGGRLGAYVPQARLKRGFAIFLVLMGIVILGQN 248


>gi|228992361|ref|ZP_04152292.1| hypothetical protein bpmyx0001_31030 [Bacillus pseudomycoides DSM
           12442]
 gi|228767386|gb|EEM16018.1| hypothetical protein bpmyx0001_31030 [Bacillus pseudomycoides DSM
           12442]
          Length = 251

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 19/186 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II+  FL G L G  G GG   ++ VL+  F        + +H+A+ TSL  +A T++  
Sbjct: 3   IIITMFLMGILLGFVGAGGAGFIIAVLTLVFH-------VPIHIALATSLTAMAFTTLSG 55

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR- 144
            + H R   + MKI         + + V S + + +    L+   A    L  I ML R 
Sbjct: 56  VISHYRERNVVMKIGCVVGGFGALGSYVGSKIGAGIPAQLLHWFTAGMLFLSAICMLVRL 115

Query: 145 ----DRLYCERKFPDNYVKYI------WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIY 193
               ++        D    Y+       G+ TG L+GA G+G   F  L LM+  G SI+
Sbjct: 116 FFVQNQKELSASLSDQLSPYVLGKGAMLGIATGILAGAFGIGSAPFIQLGLMVLLGLSIH 175

Query: 194 KATATS 199
           ++  T+
Sbjct: 176 QSVGTT 181


>gi|295098040|emb|CBK87130.1| Predicted permeases [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 269

 Score = 37.7 bits (86), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 101/247 (40%), Gaps = 27/247 (10%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           + L+G +  L G GGGL+ VP L  A         +    A+ T+       S+ S +  
Sbjct: 22  AMLAGFIDALAG-GGGLLTVPALLAA--------GMSPAQALATNKLQACGGSLSSSLYF 72

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG---ILMLKRDR 146
            R   +N+   K  I +  I +   +L++ HV    L +   +  + +G   +LM K   
Sbjct: 73  IRRKVVNLADQKLNILMTFIGSTAGALLVQHVQSDILRQILPLLVICIGLYFLLMPKLGE 132

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSAL 205
              +R+        I G   GF  G  G G G F  L  +   G ++ K+TA +  ++A 
Sbjct: 133 EDRQRRLHGLPFALIAGGCVGFYDGFFGPGAGSFYALAFVTLAGFNLAKSTAHAKVLNAT 192

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILPISILITPLATKLSY 256
                LL+ I  G  +     W+ GFV           G+ L++     LI P+   +S 
Sbjct: 193 SNVGGLLLFIIGGKVI-----WATGFVMMAGQFLGARAGSRLVLSKGQKLIRPMIVVVSA 247

Query: 257 MIGKKYL 263
           ++  K L
Sbjct: 248 VMSAKLL 254


>gi|317062510|ref|ZP_07926995.1| membrane protein [Fusobacterium ulcerans ATCC 49185]
 gi|313688186|gb|EFS25021.1| membrane protein [Fusobacterium ulcerans ATCC 49185]
          Length = 269

 Score = 37.7 bits (86), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 28/189 (14%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +A F +  +  + G GGGL+ +P    AF   G+      HVA+GT+      +++ S  
Sbjct: 11  IACFFAAFIDAIAG-GGGLISLP----AFLASGLPA----HVALGTNKVAACCSTIASSA 61

Query: 88  EHRRHGTIN---MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  + G IN   MK L  + F+  +  V T +MI   D  +L     +  +++ I  L+ 
Sbjct: 62  KFAQSGKINWQLMKKLAAFSFIGAVLGVKTVVMI---DSKYLYPIAIVLLVMVLIYTLRN 118

Query: 145 DRLYCERKFP---DNYVKYIWGMVT----GFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             L  E +F       VK  WG++     GF  G  G G G F    ++F    I+K   
Sbjct: 119 KNLGEENRFEGLTGQNVK--WGIIMAFALGFYDGFFGPGTGSF----LIFAMIRIFKIDF 172

Query: 198 TSAGVSALI 206
           T+A  +A I
Sbjct: 173 TNASGNAKI 181


>gi|228998421|ref|ZP_04158012.1| hypothetical protein bmyco0003_29830 [Bacillus mycoides Rock3-17]
 gi|229005908|ref|ZP_04163602.1| hypothetical protein bmyco0002_28320 [Bacillus mycoides Rock1-4]
 gi|228755372|gb|EEM04723.1| hypothetical protein bmyco0002_28320 [Bacillus mycoides Rock1-4]
 gi|228761342|gb|EEM10297.1| hypothetical protein bmyco0003_29830 [Bacillus mycoides Rock3-17]
          Length = 251

 Score = 37.7 bits (86), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 19/186 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II+  FL G+L G  G GG   ++ VL+  F        + +H+A+ TSL  +A T++  
Sbjct: 3   IIITMFLMGSLLGFVGAGGAGFIIAVLTLVFY-------VPIHIALATSLTAMAFTTLSG 55

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR- 144
            + H R   + MKI         + + V S + + +    L+   A    L  I ML R 
Sbjct: 56  VISHYRERNVVMKIGCVVGGFGALGSYVGSKIGAGIPAQLLHWFTAGMLFLSAICMLVRL 115

Query: 145 ----DRLYCERKFPDNYVKYI------WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIY 193
               ++        D    Y+       G+ TG L+GA G+G   F  L LM+  G SI+
Sbjct: 116 FFVQNQKELSASLSDQLSPYVLGKGAMLGIATGILAGAFGIGSAPFIQLGLMVLLGLSIH 175

Query: 194 KATATS 199
           ++  T+
Sbjct: 176 QSVGTT 181


>gi|222084814|ref|YP_002543343.1| permease protein [Agrobacterium radiobacter K84]
 gi|221722262|gb|ACM25418.1| permease protein [Agrobacterium radiobacter K84]
          Length = 308

 Score = 37.7 bits (86), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG ++ P+L        I  +I   VA+ T    +  +S+   + H R G
Sbjct: 25 GFLSGMFGVGGGFLITPLL--------IFYNIPPVVAVATGANQVVASSISGAITHFRRG 76

Query: 94 TINMKI 99
          T++MK+
Sbjct: 77 TLDMKL 82


>gi|16272162|ref|NP_438367.1| hypothetical protein HI0198 [Haemophilus influenzae Rd KW20]
 gi|145637362|ref|ZP_01793022.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           PittHH]
 gi|260580920|ref|ZP_05848744.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           RdAW]
 gi|260582414|ref|ZP_05850206.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           NT127]
 gi|2506697|sp|P46490|Y198_HAEIN RecName: Full=UPF0721 transmembrane protein HI_0198
 gi|1573158|gb|AAC21867.1| conserved hypothetical transmembrane protein [Haemophilus
           influenzae Rd KW20]
 gi|145269454|gb|EDK09397.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           PittHH]
 gi|260092409|gb|EEW76348.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           RdAW]
 gi|260094565|gb|EEW78461.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           NT127]
          Length = 255

 Score = 37.7 bits (86), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 45/267 (16%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV----AMG 72
           D  +D + ++    F++  +  + G GGGL+ +P    A  + G+  ++ +      AMG
Sbjct: 2   DIGIDLLAILFCVGFVASFIDAIAG-GGGLITIP----ALLMTGMPPAMALGTNKLQAMG 56

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            +L     ++ + F+  R     ++  +  W+F   + + + +L+I  +D +   K    
Sbjct: 57  GAL-----SASLYFLRKRAVNLRDIWFILIWVF---LGSALGTLLIQSIDVAIFKKMLPF 108

Query: 133 FCLLMGILMLKRDRLYCE-RKFPDNYVKYIWGMVT----GFLSGALGVG-GGIFTNLLML 186
             L +G+  L   +L  E RK   +Y+  ++G++     GF  G  G G G I +   + 
Sbjct: 109 LILAIGLYFLFTPKLGDEDRKQRLSYL--LFGLLVSPFLGFYDGFFGPGTGSIMSLACVT 166

Query: 187 FYGASIYKATATSAGV---SALIAFPALLVRIYSGWGLNGLPPWSLGFV---------NI 234
             G ++ KA A +  +   S L +F   L        L G   W +GFV         N+
Sbjct: 167 LLGFNLPKAAAHAKVMNFTSNLASFALFL--------LGGQILWKVGFVMMAGSILGANL 218

Query: 235 GAVLIILPISILITPLATKLSYMIGKK 261
           GA +++     LI P+   +S+M+  K
Sbjct: 219 GAKMVMTKGKTLIRPMVVIMSFMMTAK 245


>gi|228957826|ref|ZP_04119567.1| hypothetical protein bthur0005_13390 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228801908|gb|EEM48784.1| hypothetical protein bthur0005_13390 [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 262

 Score = 37.7 bits (86), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 38/180 (21%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+      L+G+  S+   +A+GTS+  +  T + S + + +H  ++ K       
Sbjct: 22  IIIVPL------LIGL-HSLSPQLAVGTSMVTVVFTGLSSTLTYMKHKRVDYK----SGL 70

Query: 106 VLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILMLKRDRL---------YCER 151
           +L I +    ++ S  +K FLN+      F IF + + IL++ RD+L           +R
Sbjct: 71  ILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLIFVSILLMLRDKLKPLSLSNTSVIKR 129

Query: 152 KFPDN-----------YVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            F DN           ++      + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 130 SFTDNDGNTVHYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 189



 Score = 37.4 bits (85), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 147 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 199

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      WI+ L
Sbjct: 200 SSATHILLGNVS------WIYAL 216


>gi|239994488|ref|ZP_04715012.1| hypothetical protein AmacA2_08374 [Alteromonas macleodii ATCC
          27126]
          Length = 61

 Score = 37.7 bits (86), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 27/41 (65%)

Query: 33 SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
          +G L+G+ GVGGG+V+VPVL   FQ +G+     M +A  T
Sbjct: 21 AGILAGMLGVGGGIVIVPVLFFLFQALGVSPESAMVIATAT 61


>gi|269839386|ref|YP_003324078.1| hypothetical protein Tter_2357 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269791116|gb|ACZ43256.1| protein of unknown function DUF81 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 255

 Score = 37.7 bits (86), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 16/200 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++  F  G L  L G GGG ++VP+L     LM   +S     A+  SL V+   +   
Sbjct: 10  LVIIGFCVGALGTLIGAGGGFLLVPIL----LLMYPHESAKTITAI--SLAVVWLNATAG 63

Query: 86  FMEHRRHGTINMKILKDWIFVLPIT--TVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + R   I+    +  IF +      V+ +L+  ++ +S  +  F +  L +   +  
Sbjct: 64  SVAYARMRRIDYH--RGTIFAVASAPGAVLGALVTRYIPRSVFDPLFGLVLLALSTYIFV 121

Query: 144 RDRLYCERKFPDNYVKYIWGMV----TGFLSGALGVGGG-IFTNLLMLFYGASIYKATAT 198
           R +       P  +V    G V     GFLS  LG+GGG I   LL+       + ATAT
Sbjct: 122 RGKAPEGSSRPA-HVNVPLGAVLSFGVGFLSSLLGIGGGIIHVPLLVQLLDYPTHIATAT 180

Query: 199 SAGVSALIAFPALLVRIYSG 218
           S  + A+++F   +  I +G
Sbjct: 181 SHFILAIMSFVGTVTHIVTG 200


>gi|67078356|ref|YP_245974.1| permease [Bacillus cereus E33L]
 gi|66970662|gb|AAY60636.1| possible permeases [Bacillus cereus E33L]
          Length = 257

 Score = 37.7 bits (86), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 25/178 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II+   + G L G+ G+GG  ++ P L      +GI  SI    A+GT L   + T +  
Sbjct: 5   IIIMGMVVGVLVGMTGIGGAALLTPFLLT----VGITPSI----AVGTDLLYNSITKMFG 56

Query: 86  FMEHRRHGTINMKILKDWIF------VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +H +  TIN K+++          ++ ITT +  L I H ++  L K    + L++  
Sbjct: 57  ITQHWKQKTINFKLVRYLALGSIPSAIIAITT-IHFLPILHQNREELLKYIIGYVLIVAA 115

Query: 140 LMLKRDRLYCERKFPDNYVKY----------IWGMVTGFLSGALGVGGGIFTNLLMLF 187
           + +    L+  +  P+ + K             G + GF+ G   VG G    ++M++
Sbjct: 116 ISIFIKILFYNQSVPNYFQKQSLEQKKNVTIFIGAILGFVVGLTSVGSGSLFAIVMIY 173


>gi|70731611|ref|YP_261352.1| hypothetical protein PFL_4260 [Pseudomonas fluorescens Pf-5]
 gi|68345910|gb|AAY93516.1| membrane protein, putative [Pseudomonas fluorescens Pf-5]
          Length = 249

 Score = 37.7 bits (86), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)

Query: 2   YDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI 61
           Y+LL  F      S +    +  L ++ +  SG + GLFGVGG +V  PVL+  F    +
Sbjct: 114 YNLLRMFMASAPASSEMRYPWPWLGVLGA-ASGAMGGLFGVGGAVVATPVLTSVFGTTQV 172

Query: 62  DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITT 111
                  VA G SL +  P++ ++ + +  H  +      DW   LP+  
Sbjct: 173 -------VAQGLSLALALPSTGVTLVTYGFHHQV------DWAIGLPLAA 209


>gi|118472709|ref|YP_889628.1| hypothetical protein MSMEG_5387 [Mycobacterium smegmatis str. MC2
           155]
 gi|118173996|gb|ABK74892.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 290

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 7/112 (6%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G L+G+ G GGG ++VP L+    L+G    + M  A+GTSL VIA  S      H    
Sbjct: 141 GGLTGMIGAGGGFLVVPALT----LLG---GLPMPAAVGTSLIVIALNSFSGLAGHLTGL 193

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            I+  +            ++ + +I+ ++   L KAF  F L M  ++L ++
Sbjct: 194 QIDWALAAAVTGAAVAGCLIGTRLITKINADALRKAFGWFVLAMSSVILAQE 245


>gi|304317022|ref|YP_003852167.1| hypothetical protein Tthe_1573 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778524|gb|ADL69083.1| protein of unknown function DUF81 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 137

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 8/93 (8%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-- 121
           S+  H+A   +L    PT+ ++ + H +   I    + + IF + I+ ++ S + S++  
Sbjct: 33  SVEQHLAQSINLLSFIPTASIALLYHLKQKNI----MTNIIFYIIISGLIGSFIGSYISI 88

Query: 122 --DKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
             D  FL K FAIF  LMGI  +   +   E K
Sbjct: 89  YIDSYFLKKMFAIFLFLMGIYEIISKQKIGESK 121


>gi|297242679|ref|ZP_06926617.1| permease [Gardnerella vaginalis AMD]
 gi|296888890|gb|EFH27624.1| permease [Gardnerella vaginalis AMD]
          Length = 267

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 7/76 (9%)

Query: 21 DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            I LI+    L+G LSGLFGVGGG+V+VP L+     M  D     H A  TSL  I  
Sbjct: 13 QNIVLIVFIGLLAGFLSGLFGVGGGMVIVPALT---VFMKFDQR---H-ATATSLVAIII 65

Query: 81 TSVMSFMEHRRHGTIN 96
          TS+   + +  +G ++
Sbjct: 66 TSLCGSIVYGLNGKVS 81


>gi|299770278|ref|YP_003732304.1| permease [Acinetobacter sp. DR1]
 gi|298700366|gb|ADI90931.1| permease [Acinetobacter sp. DR1]
          Length = 263

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L+G+ GVGGG V+VP L K   L        MH  + TSL +I   S MS + H  
Sbjct: 150 IAGLLTGMLGVGGGFVIVPALRKVTNL-------DMHSIVATSLMIIFLISGMSILMHIA 202

Query: 92  HG 93
            G
Sbjct: 203 EG 204


>gi|297560669|ref|YP_003679643.1| hypothetical protein Ndas_1708 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296845117|gb|ADH67137.1| protein of unknown function DUF81 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 291

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 19/134 (14%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
             D V   +  +++   + G ++GL G GGG ++VP    A  L+G    + M  A+GTS
Sbjct: 127 GSDAVAPPLGRVVLDGVVIGAVTGLVGAGGGFLVVP----ALVLLG---GLAMPAAVGTS 179

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPIT------TVVTSLMISHVDKSFLNK 128
           L VI   S      +         +  DW  +  ++      ++V   + S V ++ L K
Sbjct: 180 LLVIGMKSFAGLTGYL------TAVSPDWALLGAVSALAVAGSLVGVRLSSRVPEAALRK 233

Query: 129 AFAIFCLLMGILML 142
            F  F LL G+ +L
Sbjct: 234 GFGGFVLLTGVFVL 247


>gi|229172189|ref|ZP_04299754.1| hypothetical protein bcere0006_13030 [Bacillus cereus MM3]
 gi|228611532|gb|EEK68789.1| hypothetical protein bcere0006_13030 [Bacillus cereus MM3]
          Length = 262

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 38/180 (21%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+      L+G+  S+   +A+GTS+  +  T + S + + +H  ++ K       
Sbjct: 22  IIIVPL------LIGL-HSLSPQLAVGTSMVTVVFTGLSSTLTYMKHKRVDYK----SGL 70

Query: 106 VLPITTVVTSLMISHVDKSFLNKA-----FAIFCLLMGILMLKRDRL---------YCER 151
           +L I +    ++ S  +K FLN+      F IF + + IL++ RD+L           +R
Sbjct: 71  ILFIGSGPGGIIGSWANK-FLNQDTFSLYFGIFLIFVSILLMLRDKLNPLSLSNMTVIKR 129

Query: 152 KFPDNY---VKYIW--------GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            F DN    V Y +          + GF+SG  G+GGG +    +ML +    + A ATS
Sbjct: 130 SFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATS 189



 Score = 37.4 bits (85), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 147 LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 199

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G ++      W++ L
Sbjct: 200 SSATHISLGNVS------WVYAL 216


>gi|296139145|ref|YP_003646388.1| hypothetical protein Tpau_1421 [Tsukamurella paurometabola DSM
           20162]
 gi|296027279|gb|ADG78049.1| protein of unknown function DUF81 [Tsukamurella paurometabola DSM
           20162]
          Length = 260

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 3/175 (1%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++++    SG  + LFG GGG V VPVL  A   +G DD+  + VA  + L V+   +
Sbjct: 2   IVILVLVGVASGVTTALFGFGGGFVAVPVLVWAEVGLG-DDAARVAVATSSVLMVVG--A 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++ +    H    ++     + +L +   V +L    V    ++  F ++ L+  + + 
Sbjct: 59  LVATVSTPTHVLAGLRGSTCLLVLLGMGGAVGALAARGVPGGAISWGFLVYLLVTIVSVT 118

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            R         P   ++   G+  G ++  LGVGG + T  +M   G  +  ATA
Sbjct: 119 MRKGFLEVVDGPVRPLRPAVGLPIGTIAAFLGVGGSVLTVPVMRRSGHRMAVATA 173


>gi|296445368|ref|ZP_06887326.1| protein of unknown function DUF81 [Methylosinus trichosporium OB3b]
 gi|296257129|gb|EFH04198.1| protein of unknown function DUF81 [Methylosinus trichosporium OB3b]
          Length = 261

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           GL G GG ++ VP+L     ++G+ D    HVA+GTS   +A  +  S + H R G++  
Sbjct: 23  GLIGGGGSVLAVPLL---VYVVGVTDP---HVAIGTSAFAVAVNAAFSLVNHARAGSVKW 76

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +    +     I   V S +    D   L   F+   +L G+LML+
Sbjct: 77  RCGGMYAAAGTIGAAVGSTLGKSFDGQKLLFLFSFVMILTGVLMLR 122


>gi|319947833|ref|ZP_08022022.1| hypothetical protein ES5_00862 [Dietzia cinnamea P4]
 gi|319438503|gb|EFV93434.1| hypothetical protein ES5_00862 [Dietzia cinnamea P4]
          Length = 296

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 56/126 (44%), Gaps = 19/126 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I++   + G  +GL G GGG ++VP L     L G+     M  A+GTSL VIA  S   
Sbjct: 137 ILLDGLVVGAATGLVGAGGGFLVVPAL---VLLAGLP----MTAAVGTSLLVIAMKSFAG 189

Query: 86  FMEHRRHGTINMKILKDWIFVLPIT------TVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                  G     +  DW  V  +T      + V   + S V +  L K F  F LLMG 
Sbjct: 190 L------GGYLTSVSLDWPLVAAVTLAAIAGSFVGIRLTSVVPERALRKGFGAFVLLMGA 243

Query: 140 LMLKRD 145
            +L ++
Sbjct: 244 FVLSQE 249


>gi|14590420|ref|NP_142486.1| hypothetical protein PH0518 [Pyrococcus horikoshii OT3]
 gi|3256923|dbj|BAA29606.1| 252aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 252

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 70/145 (48%), Gaps = 23/145 (15%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D +   ++   ++GTL+ +FG+GGG ++VP L+    ++G++    +H A+GTS   I 
Sbjct: 2   LDLLLKSLITGLITGTLAAMFGLGGGFLLVPTLN----ILGVE----IHHAIGTSSASII 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL----MISHVDKSFLNKAFAIFCL 135
            T++ S   + +      KI  D    L  T V+ +     + S +  S L   F I  +
Sbjct: 54  FTALSSSYAYYKQ----KKIYYDIGIALASTAVIGAYIGAWLTSIISPSKLKVIFGITLI 109

Query: 136 LMGILMLK-------RDRLYCERKF 153
            +   M+K       ++++   RK+
Sbjct: 110 FVAYRMIKKKPAEEVKEKVRERRKW 134


>gi|308235758|ref|ZP_07666495.1| hypothetical protein GvagA14_05992 [Gardnerella vaginalis ATCC
          14018]
          Length = 272

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 7/74 (9%)

Query: 23 ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
          I LI+    L+G LSGLFGVGGG+V+VP L+     M  D     H A  TSL  I  TS
Sbjct: 20 IVLIVFIGLLAGFLSGLFGVGGGMVIVPALT---VFMKFDQR---H-ATATSLVAIIITS 72

Query: 83 VMSFMEHRRHGTIN 96
          +   + +  +G ++
Sbjct: 73 LCGSIVYGLNGKVS 86


>gi|239813891|ref|YP_002942801.1| hypothetical protein Vapar_0883 [Variovorax paradoxus S110]
 gi|239800468|gb|ACS17535.1| protein of unknown function DUF81 [Variovorax paradoxus S110]
          Length = 270

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 15/192 (7%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAM 71
           FL+ D  +  +C++   +F++G    + G GGGLV VP L  A    G+D  S      +
Sbjct: 6   FLAGDHSLSILCILAGVAFIAGAFDAIAG-GGGLVTVPALVIA----GLDPVSAIATSKL 60

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
             +LG ++ T+  SF    R G I  + +     +  + +V+ +L +S V +  +     
Sbjct: 61  QATLGAVSATT--SF---GRAGLIEWRRIWPAALLACVGSVLGALAVSSVPQQVVKTGLP 115

Query: 132 IFCLLMGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLF 187
              + M +      ++  E   ++           +V GF  GA G G G  F    +L 
Sbjct: 116 FLLIAMALYFALSPKMTDEDAGQRISMAAFCATAAVVIGFYDGAFGPGTGSFFMIAFVLL 175

Query: 188 YGASIYKATATS 199
            G  + +ATA +
Sbjct: 176 LGWGVVRATAHT 187


>gi|282897511|ref|ZP_06305512.1| Protein of unknown function DUF81 [Raphidiopsis brookii D9]
 gi|281197606|gb|EFA72501.1| Protein of unknown function DUF81 [Raphidiopsis brookii D9]
          Length = 298

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           GTL+GL GVGGG  +VP L        I     M  A+GTSL ++   ++  F+ +    
Sbjct: 185 GTLTGLIGVGGGFAIVPALV-------ILGKTPMKEAIGTSLLILVANAMAGFLGYLGRV 237

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
            ++  ++  +I    + +     +   +D   L K F  F + +   +L +++     K
Sbjct: 238 NLDWNLIGSFIVAASLGSFFGGYLSGFIDGRKLQKYFGYFLIAVAAFVLFQNQTAAAGK 296


>gi|319898164|ref|YP_004136361.1| inner membrane protein [Haemophilus influenzae F3031]
 gi|317433670|emb|CBY82056.1| conserved inner membrane protein [Haemophilus influenzae F3031]
          Length = 255

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 49/260 (18%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV----AMGTSLGVIA 79
           C+  VASF+   ++G    GGGL+ +P    A  + G+  ++ +      AMG +L    
Sbjct: 13  CVGFVASFID-AIAG----GGGLITIP----ALLMTGMPPAMALGTNKLQAMGGAL---- 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            ++ + F+  R     ++  +  W+F   + + + +L+I  +D +   K      L +G+
Sbjct: 60  -SASLYFLRKRAVNLRDIWFILIWVF---LGSALGTLLIQSIDVAIFKKMLPFLILAIGL 115

Query: 140 LMLKRDRLYCE-RKFPDNYVKYIWGMVT----GFLSGALGVG-GGIFTNLLMLFYGASIY 193
             L   +L  E RK   +Y+  ++G++     GF  G LG G G I +   +   G ++ 
Sbjct: 116 YFLFTPKLGDEDRKQRLSYL--LFGLLVSPFLGFYDGFLGPGTGSIMSLACVTLLGFNLP 173

Query: 194 KATATSAGV---SALIAFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIIL 241
           KA A +  +   S L +F   L        L G   W +GFV         N+GA +++ 
Sbjct: 174 KAAAHAKVMNFTSNLASFALFL--------LGGQILWKVGFVMMAGSILGANLGAKMVMT 225

Query: 242 PISILITPLATKLSYMIGKK 261
               LI P+   +S+M+  K
Sbjct: 226 KGKTLIRPMVVIMSFMMTAK 245


>gi|83589239|ref|YP_429248.1| hypothetical protein Moth_0371 [Moorella thermoacetica ATCC
          39073]
 gi|83572153|gb|ABC18705.1| Protein of unknown function DUF81 [Moorella thermoacetica ATCC
          39073]
          Length = 271

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 10/68 (14%)

Query: 26 IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIA--PTS 82
          I++  FL+G L  + G+GGG+++VP L+  F        + +H A+G S+  VIA   TS
Sbjct: 3  ILIMGFLTGILGAMVGIGGGVLLVPFLTLVFH-------VPIHTAIGASIVAVIATSSTS 55

Query: 83 VMSFMEHR 90
            +++E R
Sbjct: 56 ASTYLESR 63


>gi|255535723|ref|YP_003096094.1| hypothetical protein FIC_01585 [Flavobacteriaceae bacterium
           3519-10]
 gi|255341919|gb|ACU08032.1| hypothetical protein FIC_01585 [Flavobacteriaceae bacterium
           3519-10]
          Length = 265

 Score = 37.4 bits (85), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 8/133 (6%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
           F S+D  V    +I+  + L G ++GL G GGG +++P L     L+ +D    +  A+G
Sbjct: 137 FPSEDQKVKNTAVILHGA-LVGFVTGLIGAGGGFLIIPAL---VGLLKLD----IKKAIG 188

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           TSL +I+  S+  F        I   ++   + +      + S + + ++   L  AF  
Sbjct: 189 TSLFIISLNSIFGFSVSVSQFVIEWNLILKILGLAAAGVFIGSWLSTKIEGKKLKPAFGW 248

Query: 133 FCLLMGILMLKRD 145
           F L+MG+ ++ ++
Sbjct: 249 FVLVMGVYIIIKE 261


>gi|311114666|ref|YP_003985887.1| hypothetical protein HMPREF0421_20782 [Gardnerella vaginalis ATCC
          14019]
 gi|310946160|gb|ADP38864.1| conserved hypothetical protein [Gardnerella vaginalis ATCC 14019]
          Length = 267

 Score = 37.4 bits (85), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 7/74 (9%)

Query: 23 ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
          I LI+    L+G LSGLFGVGGG+V+VP L+     M  D     H A  TSL  I  TS
Sbjct: 15 IVLIVFIGLLAGFLSGLFGVGGGMVIVPALT---VFMKFDQR---H-ATATSLVAIIITS 67

Query: 83 VMSFMEHRRHGTIN 96
          +   + +  +G ++
Sbjct: 68 LCGSIVYGLNGKVS 81


>gi|227534549|ref|ZP_03964598.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302]
 gi|227187798|gb|EEI67865.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302]
          Length = 280

 Score = 37.4 bits (85), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 31/139 (22%), Positives = 66/139 (47%), Gaps = 10/139 (7%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + +++V   L G L  + G+GGG+++ P+L+    LMG+     +  A+G S+  +  
Sbjct: 2   EQMIMLMVTGLLGGILGAVLGIGGGMIITPILT---MLMGLP----IQYAIGASIVSVIA 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS  + + + +   +N+++         +  V+ +++   VD   L   F    +     
Sbjct: 55  TSSGATIAYLKDEMLNLRVAMFLEIATTVGAVIGAVVTGLVDGKVLYVLFGALLIFSAFN 114

Query: 141 MLKRDRLY--CERKF-PDN 156
           M+++ RL    ER+  PD 
Sbjct: 115 MIRKMRLKEPEERQSKPDE 133


>gi|183599360|ref|ZP_02960853.1| hypothetical protein PROSTU_02829 [Providencia stuartii ATCC 25827]
 gi|188021598|gb|EDU59638.1| hypothetical protein PROSTU_02829 [Providencia stuartii ATCC 25827]
          Length = 281

 Score = 37.4 bits (85), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 80/189 (42%), Gaps = 48/189 (25%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPT--S 82
           +++A+F +  L G+ G+  G+ +VP+L   F   GID    +H+A+G SL  VIA +  S
Sbjct: 6   LVLAAFSASALGGVLGMASGIFIVPILIFIF---GID----IHIAIGASLISVIACSCVS 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL----MISHVDKSFLNKAFAIFCLLMG 138
              F++ RR   + + I      VL   T + +L    +I  +    L   FAI   L  
Sbjct: 59  AAPFLK-RRLANVRLAI------VLETATTIGALTGVFLIGIISTPVLYGLFAIILGLSA 111

Query: 139 ILMLKR---------------DRLYCERKFPDNYVKYI--------WGMV----TGFLSG 171
             ML R                RL     +PD   K +         GM+     G LS 
Sbjct: 112 KQMLTRRHQTHHVTSPPTSWASRLQLHASYPDRVGKEVSYQIGHLPLGMLLMYGAGLLSA 171

Query: 172 ALGVGGGIF 180
            LG+G G+ 
Sbjct: 172 LLGIGSGVL 180


>gi|303229785|ref|ZP_07316565.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a]
 gi|302515545|gb|EFL57507.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a]
          Length = 265

 Score = 37.4 bits (85), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 9/88 (10%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           L+KD V     + I  S + G +S +FG+GGGLV VP L     +MG       H+A  T
Sbjct: 137 LTKDQVTYNKPIGIAISVIVGFISSIFGIGGGLVHVPAL---IYIMGFPT----HLATAT 189

Query: 74  SLGVIAPTSVMSFMEH--RRHGTINMKI 99
           S  ++A ++ +  + H    H   N+ I
Sbjct: 190 SHAILAVSTAVGVITHLIENHIVFNIAI 217


>gi|329770346|ref|ZP_08261729.1| hypothetical protein HMPREF0433_01493 [Gemella sanguinis M325]
 gi|328836704|gb|EGF86360.1| hypothetical protein HMPREF0433_01493 [Gemella sanguinis M325]
          Length = 282

 Score = 37.4 bits (85), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 7/137 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   IV + L+G L  L G+GGG+++ P L+  F   GID    +  A+G S+  +  TS
Sbjct: 4   ILQFIVIAILAGFLGSLVGIGGGMIITPALTILF---GID----IKYAIGASIVAVIATS 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S +   R    NM++            +V +LM        L   F++  L     ML
Sbjct: 57  SGSAIAFVRDHVSNMRVGMLLEIFTTAGGIVGALMAGVFSSKVLYIFFSLILLNSFYGML 116

Query: 143 KRDRLYCERKFPDNYVK 159
           K+  L  ++K  +  VK
Sbjct: 117 KKTGLITKKKIREEVVK 133


>gi|65318816|ref|ZP_00391775.1| COG0730: Predicted permeases [Bacillus anthracis str. A2012]
 gi|218902660|ref|YP_002450494.1| hypothetical protein BCAH820_1543 [Bacillus cereus AH820]
 gi|218534885|gb|ACK87283.1| putative membrane protein [Bacillus cereus AH820]
          Length = 139

 Score = 37.4 bits (85), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 13/83 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 24  LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 76

Query: 85  SFMEHRRHGTINMKILKDWIFVL 107
           S   H   G +       WI+ L
Sbjct: 77  SSATHISLGNV------SWIYAL 93


>gi|237732360|ref|ZP_04562841.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226907899|gb|EEH93817.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 269

 Score = 37.4 bits (85), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 19/182 (10%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           + L+G +  L G GGGL+ +P L  A    G+  +     A+ T+       S+ S +  
Sbjct: 22  AMLAGFIDSLAG-GGGLLTIPALMAA----GMPPA----QALATNKLQACGGSISSSLYF 72

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML------K 143
            R G +N+   K  IF+  I ++  +L++ HV    L +   +  + +G+  L      +
Sbjct: 73  IRRGVVNLADQKLNIFMTFIGSMSGALLVQHVQSDVLRQILPVLVICIGLYFLLMPKIGE 132

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGV 202
            DR   +R+        + G   GF  G  G   G F  L  ++  G ++ K+TA +  +
Sbjct: 133 EDR---QRRLHGLPFALVAGGCVGFYDGFFGPAAGSFYALAFVMLCGYNLAKSTAHAKVL 189

Query: 203 SA 204
           +A
Sbjct: 190 NA 191


>gi|77459951|ref|YP_349458.1| hypothetical protein Pfl01_3729 [Pseudomonas fluorescens Pf0-1]
 gi|77383954|gb|ABA75467.1| putative membrane protein [Pseudomonas fluorescens Pf0-1]
          Length = 261

 Score = 37.4 bits (85), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 18/141 (12%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++A  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   LVIAGLVVGFIVGMTGVGGGSLMTPIL----LWFGINPA----TAVGTDLLYAAITKSSG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLM---ISHVDKSFLNK------AFAIFCLL 136
            + HR++  I+  I   W+ +  +  V  +L      H     +N        F +F   
Sbjct: 60  VLVHRKNKNIDWAI-TGWLTLGSVPAVAMTLWFLSTLHTAPDAMNAIIKQALGFVLFATA 118

Query: 137 MGILMLKRDRLYCERKFPDNY 157
           + IL  KR   +  ++   NY
Sbjct: 119 LAILFKKRLLEFAHKRAGGNY 139


>gi|260555064|ref|ZP_05827285.1| permease [Acinetobacter baumannii ATCC 19606]
 gi|260411606|gb|EEX04903.1| permease [Acinetobacter baumannii ATCC 19606]
          Length = 263

 Score = 37.4 bits (85), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L+G+ GVGGG V+VP L K   L        MH  + TSL +I   S MS + H  
Sbjct: 150 IAGLLTGMLGVGGGFVIVPALRKVTNL-------DMHSIVATSLMIIFLISGMSIVMHIA 202

Query: 92  HG 93
            G
Sbjct: 203 EG 204


>gi|257468228|ref|ZP_05632324.1| transporter [Fusobacterium ulcerans ATCC 49185]
          Length = 276

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 24/187 (12%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +A F +  +  + G GGGL+ +P    AF   G+      HVA+GT+      +++ S  
Sbjct: 18  IACFFAAFIDAIAG-GGGLISLP----AFLASGLPA----HVALGTNKVAACCSTIASSA 68

Query: 88  EHRRHGTIN---MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  + G IN   MK L  + F+  +  V T +MI   D  +L     +  +++ I  L+ 
Sbjct: 69  KFAQSGKINWQLMKKLAAFSFIGAVLGVKTVVMI---DSKYLYPIAIVLLVMVLIYTLRN 125

Query: 145 DRLYCERKFPDNYVKYI-WGMVT----GFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L  E +F     + + WG++     GF  G  G G G F    ++F    I+K   T+
Sbjct: 126 KNLGEENRFEGLTGQNVKWGIIMAFALGFYDGFFGPGTGSF----LIFAMIRIFKIDFTN 181

Query: 200 AGVSALI 206
           A  +A I
Sbjct: 182 ASGNAKI 188


>gi|169796015|ref|YP_001713808.1| hypothetical protein ABAYE1938 [Acinetobacter baumannii AYE]
 gi|213157251|ref|YP_002319296.1| hypothetical protein AB57_1938 [Acinetobacter baumannii AB0057]
 gi|215483472|ref|YP_002325689.1| hypothetical protein ABBFA_001786 [Acinetobacter baumannii
           AB307-0294]
 gi|301344725|ref|ZP_07225466.1| hypothetical protein AbauAB0_00750 [Acinetobacter baumannii AB056]
 gi|301510298|ref|ZP_07235535.1| hypothetical protein AbauAB05_01944 [Acinetobacter baumannii AB058]
 gi|301596399|ref|ZP_07241407.1| hypothetical protein AbauAB059_11310 [Acinetobacter baumannii
           AB059]
 gi|169148942|emb|CAM86817.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter baumannii AYE]
 gi|213056411|gb|ACJ41313.1| hypothetical protein AB57_1938 [Acinetobacter baumannii AB0057]
 gi|213988273|gb|ACJ58572.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
          Length = 263

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L+G+ GVGGG V+VP L K   L        MH  + TSL +I   S MS + H  
Sbjct: 150 IAGLLTGMLGVGGGFVIVPALRKVTNL-------DMHSIVATSLMIIFLISGMSIVMHIA 202

Query: 92  HG 93
            G
Sbjct: 203 EG 204


>gi|261208762|ref|ZP_05923199.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289565554|ref|ZP_06446001.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|294614418|ref|ZP_06694334.1| hypothetical protein EfmE1636_0524 [Enterococcus faecium E1636]
 gi|260077264|gb|EEW64984.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289162636|gb|EFD10489.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|291592726|gb|EFF24319.1| hypothetical protein EfmE1636_0524 [Enterococcus faecium E1636]
          Length = 262

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 23/180 (12%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+ T+  + G+GGG+++ P+L          D I  H   G S         MS +   R
Sbjct: 12  LANTVGAISGMGGGVLIKPIL----------DLIGAHSIAGISFYSTVAVFTMSIVSTVR 61

Query: 92  H----GTINMKILKDWIFVLPITTVVTSLMISHVD-KSFLN-KAFAIFCLLMGILMLKRD 145
                 ++N +I+  W+    +   +   ++  V  + F N K   +  + + +L L   
Sbjct: 62  QVSSGKSLNWQIV-GWVSGGAVVGGIAGNIVFEVFLQLFENEKHVQLIQIFLTVLTLVFA 120

Query: 146 RLYCERKFPD-NYVKYIW----GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
             Y +   P  +   +IW    G++ GFL+  LG+GGG I  +LLML +   I +AT  S
Sbjct: 121 FFYAKHHQPKFHLTSWIWYLICGVILGFLASFLGIGGGPINVSLLMLMFALPIKEATLYS 180


>gi|193077338|gb|ABO12137.2| putative membrane protein [Acinetobacter baumannii ATCC 17978]
          Length = 263

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L+G+ GVGGG V+VP L K   L        MH  + TSL +I   S MS + H  
Sbjct: 150 IAGLLTGMLGVGGGFVIVPALRKVTNL-------DMHSIVATSLMIIFLISGMSIVMHIA 202

Query: 92  HG 93
            G
Sbjct: 203 EG 204


>gi|150395375|ref|YP_001325842.1| hypothetical protein Smed_0148 [Sinorhizobium medicae WSM419]
 gi|150026890|gb|ABR59007.1| protein of unknown function DUF81 [Sinorhizobium medicae WSM419]
          Length = 308

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG ++ P+L        I  +I   VA+ T    +  +S+   + H R G
Sbjct: 25 GFLSGMFGVGGGFLITPLL--------IFYNIPPVVAVATGANQVVASSISGAIAHFRRG 76

Query: 94 TINMKI 99
          TI++K+
Sbjct: 77 TIDIKL 82


>gi|169633557|ref|YP_001707293.1| hypothetical protein ABSDF1939 [Acinetobacter baumannii SDF]
 gi|184158065|ref|YP_001846404.1| permease [Acinetobacter baumannii ACICU]
 gi|332874525|ref|ZP_08442428.1| hypothetical protein HMPREF0022_02047 [Acinetobacter baumannii
           6014059]
 gi|169152349|emb|CAP01274.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter baumannii]
 gi|183209659|gb|ACC57057.1| predicted permease [Acinetobacter baumannii ACICU]
 gi|322508384|gb|ADX03838.1| permease [Acinetobacter baumannii 1656-2]
 gi|323518006|gb|ADX92387.1| permease [Acinetobacter baumannii TCDC-AB0715]
 gi|332737369|gb|EGJ68293.1| hypothetical protein HMPREF0022_02047 [Acinetobacter baumannii
           6014059]
          Length = 263

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L+G+ GVGGG V+VP L K   L        MH  + TSL +I   S MS + H  
Sbjct: 150 IAGLLTGMLGVGGGFVIVPALRKVTNL-------DMHSIVATSLMIIFLISGMSIVMHIA 202

Query: 92  HG 93
            G
Sbjct: 203 EG 204


>gi|15964290|ref|NP_384643.1| hypothetical protein SMc02232 [Sinorhizobium meliloti 1021]
 gi|307307026|ref|ZP_07586765.1| protein of unknown function DUF81 [Sinorhizobium meliloti BL225C]
 gi|307320680|ref|ZP_07600093.1| protein of unknown function DUF81 [Sinorhizobium meliloti AK83]
 gi|15073467|emb|CAC45109.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
 gi|306893715|gb|EFN24488.1| protein of unknown function DUF81 [Sinorhizobium meliloti AK83]
 gi|306901966|gb|EFN32565.1| protein of unknown function DUF81 [Sinorhizobium meliloti BL225C]
          Length = 308

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG ++ P+L        I  +I   VA+ T    +  +S+   + H R G
Sbjct: 25 GFLSGMFGVGGGFLITPLL--------IFYNIPPVVAVATGANQVVASSISGAIAHFRRG 76

Query: 94 TINMKI 99
          TI++K+
Sbjct: 77 TIDIKL 82


>gi|239501816|ref|ZP_04661126.1| permease [Acinetobacter baumannii AB900]
          Length = 263

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L+G+ GVGGG V+VP L K   L        MH  + TSL +I   S MS + H  
Sbjct: 150 IAGLLTGMLGVGGGFVIVPALRKVTNL-------DMHSIVATSLMIIFLISGMSIVMHIA 202

Query: 92  HG 93
            G
Sbjct: 203 EG 204


>gi|138896571|ref|YP_001127024.1| hypothetical protein GTNG_2934 [Geobacillus thermodenitrificans
          NG80-2]
 gi|196249274|ref|ZP_03147972.1| protein of unknown function DUF81 [Geobacillus sp. G11MC16]
 gi|134268084|gb|ABO68279.1| Hypothetical membrane spanning protein [Geobacillus
          thermodenitrificans NG80-2]
 gi|196211031|gb|EDY05792.1| protein of unknown function DUF81 [Geobacillus sp. G11MC16]
          Length = 300

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 4/70 (5%)

Query: 24 CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI---AP 80
           L+++  F++GT+  L G+GGG+++VP L   F  +G   ++   VA+GTSL VI     
Sbjct: 4  ALLLLIGFVAGTVGSLAGLGGGVIIVPAL-LFFGSLGWLSAVTPQVAVGTSLVVIIFNGL 62

Query: 81 TSVMSFMEHR 90
          +S +S+M+ +
Sbjct: 63 SSTLSYMKDK 72


>gi|119873364|ref|YP_931371.1| hypothetical protein Pisl_1881 [Pyrobaculum islandicum DSM 4184]
 gi|119674772|gb|ABL89028.1| protein of unknown function DUF81 [Pyrobaculum islandicum DSM 4184]
          Length = 243

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 24/121 (19%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F+ G  S LFGVGGG + VP L     + G D       A   S+G+I PT+V S   + 
Sbjct: 129 FIGGFASSLFGVGGGTIFVPAL---ILISGFDP----KSAAAMSMGIIFPTAVSSTTIYA 181

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL---------NKAFAIFCLLMGILM 141
             G +N+         L +   V S + S+    ++          + F I+  ++GI  
Sbjct: 182 ALGVLNLP--------LAVAIAVGSFIGSYTSSRYIMPKLKSGTVRRLFVIYVFVIGIYY 233

Query: 142 L 142
           L
Sbjct: 234 L 234


>gi|330503506|ref|YP_004380375.1| hypothetical protein MDS_2591 [Pseudomonas mendocina NK-01]
 gi|328917791|gb|AEB58622.1| hypothetical protein MDS_2591 [Pseudomonas mendocina NK-01]
          Length = 255

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 7/65 (10%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           +SG + GLFGVGG +V  PVL+  F    +       VA G SL +  P++ ++ + +  
Sbjct: 145 VSGAMGGLFGVGGAVVATPVLTSVFGATQV-------VAQGLSLSLALPSTGVTLLTYAM 197

Query: 92  HGTIN 96
           H  +N
Sbjct: 198 HQHVN 202


>gi|254361076|ref|ZP_04977221.1| possible membrane protein [Mannheimia haemolytica PHL213]
 gi|261493597|ref|ZP_05990117.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495435|ref|ZP_05991883.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|153092562|gb|EDN73617.1| possible membrane protein [Mannheimia haemolytica PHL213]
 gi|261308940|gb|EEY10195.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310779|gb|EEY11962.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 254

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 115/259 (44%), Gaps = 31/259 (11%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + ++   + L+G +  + G GGGL+ +P L  A    G+  ++    A+GT+     
Sbjct: 5   IDVLAILFAVATLAGFIDAIAG-GGGLLTIPALMAA----GLPPAM----ALGTNKLQAC 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLP--ITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
             S+ S +   R   +N+K  + W+ +L   + +   ++ +  ++  FL        L++
Sbjct: 56  GGSLSSSLYFIRKKAVNLK--QIWLLILCTFLGSAAGTIFVQMINVDFLKTLLPFLILII 113

Query: 138 GILMLKRDRLYCE-RKFPDNYVKYIW--GMVTGFLSGALGVGGGIFTNL-LMLFYGASIY 193
           GI  L   ++  E RK   ++  + +   +  GF  G  G   G F  L  +L  G ++ 
Sbjct: 114 GIYFLVSPKIGDEDRKQRISFTLFAFTAAVALGFYDGMFGPATGSFMTLAFILLLGFNLS 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILPIS 244
           KA A +  ++    F +L+      + L G   W +G +          +GA +++    
Sbjct: 174 KAVAHAKVINFTSNFASLIF-----FTLGGAVMWKIGLIMMVGQFIGGTLGAKMVMTKGK 228

Query: 245 ILITPLATKLSYMIGKKYL 263
            LI P+   +S+M+  K L
Sbjct: 229 KLIRPMLVTMSFMMVGKML 247


>gi|99078076|ref|YP_611334.1| hypothetical protein TM1040_3098 [Ruegeria sp. TM1040]
 gi|99035214|gb|ABF62072.1| protein of unknown function DUF81 [Ruegeria sp. TM1040]
          Length = 330

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G LSG+FGVGGG ++ P+L      +GI  +    VA+ T    I  +SV   + H R  
Sbjct: 50  GVLSGMFGVGGGFLLTPLLF----FIGIPPA----VAVATGANQIVASSVSGVLAHLRRR 101

Query: 94  TINMKI 99
           T+++K+
Sbjct: 102 TVDLKM 107


>gi|120402827|ref|YP_952656.1| hypothetical protein Mvan_1828 [Mycobacterium vanbaalenii PYR-1]
 gi|119955645|gb|ABM12650.1| protein of unknown function DUF81 [Mycobacterium vanbaalenii PYR-1]
          Length = 291

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 7/120 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I+    + G ++GL G GGG ++VP L+    L+G    + M +A+GTSL VIA  S   
Sbjct: 134 IVAEGLIVGLVTGLVGAGGGFLVVPALA----LLG---GLPMPIAVGTSLIVIAMKSFAG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +     IN  +         I  ++ + + + ++   L K F  F L+M  ++L ++
Sbjct: 187 LAGYLTSVHINWTLALAVTAAAVIGALIGARLTAMINPDSLRKTFGWFVLVMSSVILAQE 246


>gi|325122135|gb|ADY81658.1| hypothetical protein BDGL_001072 [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 263

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L+G+ GVGGG V+VP L K   L        MH  + TSL +I   S MS + H  
Sbjct: 150 IAGLLTGMLGVGGGFVIVPALRKVTNL-------DMHSIVATSLMIIFLISGMSIVMHIA 202

Query: 92  HG 93
            G
Sbjct: 203 EG 204


>gi|313122602|ref|YP_004044529.1| permease [Halogeometricum borinquense DSM 11551]
 gi|312296084|gb|ADQ69173.1| predicted permease [Halogeometricum borinquense DSM 11551]
          Length = 261

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++ A   +G ++GL G    +V+ PVL     ++G +     + A+G SL      S +
Sbjct: 7   VVLFAGIGAGAVTGLIGASAVVVVTPVL---ITVLGYNP----YTAIGISLVTDVFASSV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S   + R+G I ++      F   +  VV S +   VD + L     +  LLMG+   ++
Sbjct: 60  SAATYWRNGNIRIRGGLTIAFTAVLAAVVGSWLSGDVDPTTLGGLSGVVILLMGVSFTRK 119

Query: 145 ---DRLYCERKFPD--------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
              +RL   R+  D             + G   G ++G  G GGG+   +++ F
Sbjct: 120 SLNERLESFRETADLSAVREHKTVASALAGGFIGTMTGVFGAGGGVMILIILTF 173


>gi|227512813|ref|ZP_03942862.1| possible permease [Lactobacillus buchneri ATCC 11577]
 gi|227084013|gb|EEI19325.1| possible permease [Lactobacillus buchneri ATCC 11577]
          Length = 245

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 15/139 (10%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKIL---KDWIFVLPITTVVTSLMISHVDKSFL 126
           A  TSL    P  V+    H R G  NMK     K  I  LP  TV+ SL+   +  +  
Sbjct: 42  AAATSLFTALPALVVGTYSHYRTG--NMKFSYGSKLLITALP-ATVIGSLVSGVIPVTLY 98

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFPDN---YVKYIWGMVTGFLSGALGVGGG--IFT 181
             A AI   ++G+  L+R   +  +    N   +  Y++G ++G + G  G+ GG  +  
Sbjct: 99  TWAIAIILFVLGVQTLRRS--FKGKPSSSNLKPWTVYLFGALSGLMVGIAGLSGGGPVMA 156

Query: 182 NLLMLFYGASIYKATATSA 200
            LL+L  G ++ +A ATS+
Sbjct: 157 GLLLL--GLNMPQAAATSS 173


>gi|328950601|ref|YP_004367936.1| protein of unknown function DUF81 [Marinithermus hydrothermalis DSM
           14884]
 gi|328450925|gb|AEB11826.1| protein of unknown function DUF81 [Marinithermus hydrothermalis DSM
           14884]
          Length = 227

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 10/129 (7%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++ A  L+G  SGL G+GGG VMVP L        +       +A GTSL  +   + +
Sbjct: 108 ILLFAGALAGFASGLLGIGGGTVMVPALV-------LGAGFPQQLAQGTSLAAMILPAWV 160

Query: 85  SFMEHRRHGTINMKILKDWIFV-LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
             + H R G +  +I   W+   + +       +   + +  L   FA+  L  G   + 
Sbjct: 161 GALTHYRLGHVRGEI-APWLLAGIAVGAYAGGSLALGLPEGILRGVFALVLLWTGTRYV- 218

Query: 144 RDRLYCERK 152
           R R   E++
Sbjct: 219 RSRTRGEQR 227


>gi|296332930|ref|ZP_06875390.1| permease [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305673276|ref|YP_003864948.1| putative permease [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296150210|gb|EFG91099.1| permease [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305411520|gb|ADM36639.1| putative permease [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 245

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 13/143 (9%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI--------LKDWIFVLPITTVVTSLMI 118
           +H A+GTSL  +A TS+     H R G I MKI             F   +T+ + + ++
Sbjct: 37  IHTALGTSLAGMAFTSLSGAYSHYREGNIQMKIGLTVGCFAAVGSFFGAKLTSFIPADLL 96

Query: 119 SHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK-YIWGMVTGFLSGALGVGG 177
            ++    L   F    L++  L L +++    +     Y +  I G+V G LSG  G+G 
Sbjct: 97  HYLTAGML---FLSAILILIRLFLLKEKAQVNQSSLSTYTRAVILGIVAGVLSGTFGIGS 153

Query: 178 GIFTNL-LMLFYGASIYKATATS 199
             F  + LM+    SI  +  T+
Sbjct: 154 APFIQIGLMIMLNLSIRHSVGTT 176


>gi|212716541|ref|ZP_03324669.1| hypothetical protein BIFCAT_01468 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660528|gb|EEB21103.1| hypothetical protein BIFCAT_01468 [Bifidobacterium catenulatum DSM
           16992]
          Length = 103

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 14/80 (17%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++++   + G LSG+FG+GGG V+VP    A   +G+      H A  TS+  I PTS+ 
Sbjct: 3   VLVIVGMIVGLLSGMFGIGGGTVIVP----ALVWLGLSQR---HAA-ATSMLAIVPTSIS 54

Query: 85  SFMEHRRHGTINMKILKDWI 104
             + +  +G +      DW+
Sbjct: 55  GVISYAHNGNV------DWV 68


>gi|227820754|ref|YP_002824724.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
 gi|227339753|gb|ACP23971.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
          Length = 308

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG ++ P+L        I  +I   VA+ T    +  +S+   + H R G
Sbjct: 25 GFLSGMFGVGGGFLITPLL--------IFYNIPPVVAVATGANQVVASSISGAITHFRRG 76

Query: 94 TINMKI 99
          TI++K+
Sbjct: 77 TIDIKL 82


>gi|298674473|ref|YP_003726223.1| hypothetical protein Metev_0515 [Methanohalobium evestigatum
           Z-7303]
 gi|298287461|gb|ADI73427.1| protein of unknown function DUF81 [Methanohalobium evestigatum
           Z-7303]
          Length = 252

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 30/189 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL--GVIAPTS 82
           LI +  F    L  + G GG  + VP+L      +GID    +H+ + T L     A  S
Sbjct: 5   LIAIIVFFLAILFSIIGTGGSTIYVPLL----YWIGID----LHIVIPTVLLINTFATGS 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPI--TTVVTSLMISHVDKS----FLNKAFAIFCLL 136
              F   ++        + D+   +P+  T+V  + + ++  KS     L   FA+  LL
Sbjct: 57  ATIFYTKKK--------MVDFKTAIPLILTSVAGAPIGAYFSKSTPQDLLILIFAVLLLL 108

Query: 137 MGILML----KRDRLYCE-RKFPDNYV-KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
           +GI M+    +   L C  R    N +   I G + G ++G LG+ GG+F   L+++ G 
Sbjct: 109 IGIHMVFTSSRIGHLKCTGRGTRKNVIISLISGFMIGIVAGLLGLSGGVFIVPLLVYLGY 168

Query: 191 SIYKATATS 199
           +I  A+ATS
Sbjct: 169 NIKTASATS 177


>gi|301155041|emb|CBW14504.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 264

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 11/151 (7%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME-HR 90
           ++  +S +FG+GGG++MVP+L   F          + +   TSL ++  +S ++ +  ++
Sbjct: 15  MTNIMSAIFGIGGGVLMVPILYTLF------PQFPLQMIAATSLTIVMGSSFINLIYFYK 68

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYC 149
           +  +IN K +  W   + I   +   +  +V    +   F I   L+ I  +  ++    
Sbjct: 69  QKVSINYKAMLIWSVGMIIGVQLGFELSFYVPDIAIISVFVITLSLLAIRTIFSKESATS 128

Query: 150 ERKFPDNYVKYIWGMVT--GFLSGALGVGGG 178
           ++   D  +K + G+ T  GF++G  G+GGG
Sbjct: 129 QQTTTDETIKGM-GLSTFGGFIAGMTGIGGG 158


>gi|262279029|ref|ZP_06056814.1| permease [Acinetobacter calcoaceticus RUH2202]
 gi|262259380|gb|EEY78113.1| permease [Acinetobacter calcoaceticus RUH2202]
          Length = 263

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L+G+ GVGGG V+VP L K   L        MH  + TSL +I   S MS + H  
Sbjct: 150 IAGLLTGMLGVGGGFVIVPALRKVTNL-------DMHSIVATSLMIIFLISGMSIVMHIA 202

Query: 92  HG 93
            G
Sbjct: 203 EG 204


>gi|67924775|ref|ZP_00518176.1| Protein of unknown function DUF81 [Crocosphaera watsonii WH 8501]
 gi|67853370|gb|EAM48728.1| Protein of unknown function DUF81 [Crocosphaera watsonii WH 8501]
          Length = 265

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 7/63 (11%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G ++GLFG+GGG++MVP+     Q++ + ++I    A+ TSLGVI  T++ +   H   
Sbjct: 153 AGFIAGLFGLGGGVIMVPL-----QVILLGENI--KAAIQTSLGVIVITAIFACGSHAMS 205

Query: 93  GTI 95
           G +
Sbjct: 206 GNV 208


>gi|149190316|ref|ZP_01868589.1| hypothetical protein VSAK1_13922 [Vibrio shilonii AK1]
 gi|148835805|gb|EDL52769.1| hypothetical protein VSAK1_13922 [Vibrio shilonii AK1]
          Length = 259

 Score = 37.0 bits (84), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 111/263 (42%), Gaps = 33/263 (12%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV-AMGTSL 75
           +  ++ + L+ + + L+G +  + G GGGL+ +P L      +G+  +  +    + +S 
Sbjct: 2   EVTIEILGLLFLVAGLAGFIDAMAG-GGGLLTLPALLS----VGVPPTQALATNKLQSSF 56

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
           G  + T         R+G +++K ++  I    I + V + ++ H+D   L     +  L
Sbjct: 57  GSFSAT-----WYFVRNGIVDLKEMRLAILCTFIGSAVGAELVQHIDAGVLTSLIPV--L 109

Query: 136 LMGI-----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
           L+GI     L  +      + K  +    +  G   GF  G  G G G IFT   +    
Sbjct: 110 LLGISLYFLLAPQAGEGGGKPKMSETLFAFSVGTGVGFYDGFFGPGTGSIFTICFVAIAQ 169

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLII 240
            SI  ATA +  ++      AL+  I     + GLP W +G V          +GA +++
Sbjct: 170 LSIVHATAKTKVLNFTSNLAALIFFI-----IAGLPVWEIGLVMAVGGFLGARMGAKVVV 224

Query: 241 LPISILITPLATKLSYMIGKKYL 263
                 I PL   +S ++  K L
Sbjct: 225 SKGKKFIRPLVVIMSMVMALKLL 247


>gi|303242597|ref|ZP_07329073.1| protein of unknown function DUF81 [Acetivibrio cellulolyticus CD2]
 gi|302589854|gb|EFL59626.1| protein of unknown function DUF81 [Acetivibrio cellulolyticus CD2]
          Length = 117

 Score = 37.0 bits (84), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 7/110 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  +GLFG GGG + VP +     L+  ++    H A  T++ +I P +V+S + +  +
Sbjct: 14  TGLANGLFGSGGGTIAVPAM---VLLLNEEE----HKAHATAISIILPLTVVSAILYMSN 66

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             IN  +    +    I   + + +++    + L K FA+F +   I M+
Sbjct: 67  NFINWNLTAKVMIGGIIGGYIGAKLLNICPSNILRKIFAVFMIAAAIRMI 116


>gi|220905401|ref|YP_002480713.1| hypothetical protein Ddes_2139 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869700|gb|ACL50035.1| protein of unknown function DUF81 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 245

 Score = 37.0 bits (84), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 20/179 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++     L G L G+ GVGG  +++P    A  L    ++   H+AMGT+L    P  
Sbjct: 3   IAVLYATCLLVGFLVGITGVGG--ILIP---PALILFSGQET---HMAMGTALASFLPVG 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLP-----ITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           ++  + +RR G +      DW   LP     +     +L+ + +    L    A   +  
Sbjct: 55  LVGTIMYRRLGHV------DWHMALPYMLGSLAAWPGALLNAWLPAGPLVALLAGIIIFA 108

Query: 138 GILMLKRDRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           G+  L+  R      F  +   +   G VTG ++G  G GG + +   M+  G S   A
Sbjct: 109 GLCALRPPRPGSGSAFWQSRRGFFCIGAVTGLMAGLTGAGGPVLSIPWMIMAGVSPMTA 167


>gi|126641755|ref|YP_001084739.1| hypothetical protein A1S_1710 [Acinetobacter baumannii ATCC 17978]
          Length = 233

 Score = 37.0 bits (84), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L+G+ GVGGG V+VP L K   L        MH  + TSL +I   S MS + H  
Sbjct: 120 IAGLLTGMLGVGGGFVIVPALRKVTNL-------DMHSIVATSLMIIFLISGMSIVMHIA 172

Query: 92  HG 93
            G
Sbjct: 173 EG 174


>gi|269138797|ref|YP_003295498.1| hypothetical protein ETAE_1446 [Edwardsiella tarda EIB202]
 gi|267984458|gb|ACY84287.1| hypothetical protein ETAE_1446 [Edwardsiella tarda EIB202]
          Length = 266

 Score = 37.0 bits (84), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 108/264 (40%), Gaps = 29/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+ V    +  LS LFG+GGG+V+VPVL   F          + +   TSL V+  T+
Sbjct: 6   LALLCVCGAATSLLSALFGLGGGIVLVPVLHVLF------PHCEVQLLAATSLSVVMLTA 59

Query: 83  VMSFMEH-RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL------NKAFAIFCL 135
            ++ +   R+    + ++L  W         V++ M   V  SFL         FA   L
Sbjct: 60  FINVLAFWRQQARPDTRLLIWWAL------GVSAGMQLGVHISFLLPGKAILLIFAAILL 113

Query: 136 LMGILMLKRDRLYCERKF-PDNYVKYIWGM--VTGFLSGALGVGGGIFTNLLMLFYGASI 192
           LM +  L+R R        P        G+    G ++G  G+GGG     L+    A  
Sbjct: 114 LMALRNLRRPRQVAATAMSPRCTRNRGLGLCFAGGTVAGITGLGGGSVLAPLLSLLPAIP 173

Query: 193 YKATATSAGV-----SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
            +  A          SA+     LL    +G  L G   W  G+VN+  VL +   ++L 
Sbjct: 174 RRQVAVYCNWLLLLGSAVTVTTYLLRTPPTGAVLPG--DWQFGYVNLSVVLPVFSCALLT 231

Query: 248 TPLATKLSYMIGKKYLTIGFSMIM 271
            PLA +L   + +      FS ++
Sbjct: 232 QPLAMRLRRQMSEARQRQAFSAVL 255


>gi|332186720|ref|ZP_08388463.1| hypothetical protein SUS17_1721 [Sphingomonas sp. S17]
 gi|332013372|gb|EGI55434.1| hypothetical protein SUS17_1721 [Sphingomonas sp. S17]
          Length = 260

 Score = 37.0 bits (84), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 14/135 (10%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           GL G GG ++ VP++     L+G+  +   HVA+GTS   +A  +    + H R GT+  
Sbjct: 23  GLVGGGGSILAVPLM---VYLVGVPSA---HVAIGTSALAVAVNAATGLIGHARAGTVKW 76

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR------LYCER 151
           +    +           S      D + L   FA+  + +GI+ML+  +        C R
Sbjct: 77  RCGGMYAAAGIAGAFAGSTAGKAFDGTHLLFLFALVMVAVGIVMLRGRKAEGVPGAQCNR 136

Query: 152 KFPDNYVKYIWGMVT 166
           +     + +  G+VT
Sbjct: 137 ENAPKVLGF--GLVT 149


>gi|259415120|ref|ZP_05739042.1| membrane protein [Silicibacter sp. TrichCH4B]
 gi|259349030|gb|EEW60784.1| membrane protein [Silicibacter sp. TrichCH4B]
          Length = 305

 Score = 37.0 bits (84), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG ++ P+L      +GI  +    VA+ T    I  +SV   + H R  
Sbjct: 25 GVLSGMFGVGGGFLLTPLLF----FIGIPPA----VAVATGANQIVASSVSGVLAHLRRR 76

Query: 94 TINMKI 99
          T+++K+
Sbjct: 77 TVDLKM 82


>gi|153834107|ref|ZP_01986774.1| adenylosuccinate synthetase [Vibrio harveyi HY01]
 gi|148869572|gb|EDL68567.1| adenylosuccinate synthetase [Vibrio harveyi HY01]
          Length = 251

 Score = 37.0 bits (84), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 17/172 (9%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM--HVAMGTSLGVIAPTSVMSFM 87
           S ++ TL+ L G G GL+  P+L      +G+  S+ +  H     +LG+ A ++     
Sbjct: 13  SLVANTLASLSGGGAGLLQFPLLI----FLGLPFSVALGTHKVASVALGLGAAST----- 63

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-MLKRDR 146
            H + GTI  KI    I V  I  V+ + +I  +      K      L +GI    K++ 
Sbjct: 64  -HLKAGTIKPKIALYLILVGSIGVVIGANLIVQIPDDIAEKMLGAMILALGIYSRFKKEL 122

Query: 147 LYCERKFPDNYVKYIWG----MVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
              E     + + +I G    M+ G ++G+L  G G+   L ++ +    YK
Sbjct: 123 GQVELATHRDTLGWITGGLVLMLIGVVNGSLTAGSGLLVTLFLVRWFGYDYK 174


>gi|293608137|ref|ZP_06690440.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828710|gb|EFF87072.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 263

 Score = 37.0 bits (84), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L+G+ GVGGG V+VP L K   L        MH  + TSL +I   S MS + H  
Sbjct: 150 IAGLLTGMLGVGGGFVIVPALRKVTNL-------DMHSIVATSLMIIFLISGMSIVMHIA 202

Query: 92  HG 93
            G
Sbjct: 203 EG 204


>gi|75909989|ref|YP_324285.1| hypothetical protein Ava_3785 [Anabaena variabilis ATCC 29413]
 gi|75703714|gb|ABA23390.1| Protein of unknown function DUF81 [Anabaena variabilis ATCC
          29413]
          Length = 278

 Score = 37.0 bits (84), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 48/81 (59%), Gaps = 7/81 (8%)

Query: 19 VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
          ++++  L+ + SF +G +  L G+GGG+V+VP+L+  F   G+D    +  A+G SL  +
Sbjct: 3  ILEFSLLVWLGSFSAGFIGALTGLGGGVVIVPLLTSVF---GVD----IRYAVGASLVSV 55

Query: 79 APTSVMSFMEHRRHGTINMKI 99
            TS+ +   + + G  N+++
Sbjct: 56 IATSLGAASTYIKKGYTNLRL 76


>gi|330446657|ref|ZP_08310309.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490848|dbj|GAA04806.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 254

 Score = 37.0 bits (84), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 20/179 (11%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + S +S TL+ L G G GL+  P+L   F  +    ++  H     +LGV A       +
Sbjct: 11  IGSLISNTLASLSGGGAGLIQFPLL--IFLGLPFGIALATHKVASVALGVGAA------L 62

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
           +H R GT++       I    I  ++ + +I    +     A  I  + +GI  L +  L
Sbjct: 63  KHLRQGTLSWGFTLYVILTGAIGVILGAHLILSFPEHIAEAALGILIISLGIYSLMKKEL 122

Query: 148 YCERKFPDNYVKYIWGMV--------TGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
                  +   K   GMV         G L+G+L  G G+F  L L+ ++G +  +A A
Sbjct: 123 GQNENSINRDTK---GMVIGGLGLATIGVLNGSLTAGTGLFVTLFLVRWFGFNYKQAVA 178


>gi|37521834|ref|NP_925211.1| hypothetical protein gll2265 [Gloeobacter violaceus PCC 7421]
 gi|35212833|dbj|BAC90206.1| gll2265 [Gloeobacter violaceus PCC 7421]
          Length = 119

 Score = 37.0 bits (84), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 13/76 (17%)

Query: 28 VASFLS-----GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPT 81
          +AS LS     G L+G+FG+GGG +MVP +     L+G    +    A GTSL  ++ P 
Sbjct: 3  IASLLSLGLVAGVLAGMFGIGGGAIMVPAM---MFLIGFSTKL----ATGTSLAALLLPF 55

Query: 82 SVMSFMEHRRHGTINM 97
           +   +E+ ++G +N+
Sbjct: 56 GLFGVLEYYKNGQVNI 71


>gi|293553139|ref|ZP_06673777.1| hypothetical protein EfmE1039_0519 [Enterococcus faecium E1039]
 gi|291602730|gb|EFF32944.1| hypothetical protein EfmE1039_0519 [Enterococcus faecium E1039]
          Length = 278

 Score = 37.0 bits (84), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 21/179 (11%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+ T+  + G+GGG+++ P+L          D I  H   G S         MS +   R
Sbjct: 12  LANTVGAISGIGGGVLIKPIL----------DLIGAHSVAGISFYSTVAVFTMSIVSTVR 61

Query: 92  H----GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN-KAFAIFCLLMGILMLKRDR 146
                 ++N +I+        +  VV +++     + F N K   +  + + +L L    
Sbjct: 62  QVSSGKSLNWQIVGWVSSGAVVGGVVGNIVFEVFLQLFENEKHVQLIQIFLTVLTLVFAF 121

Query: 147 LYCERKFPD-NYVKYIW----GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            Y +   P  +   + W    G+V GFL+  LG+GGG +  +LLML +   I +AT  S
Sbjct: 122 FYTKHHQPKFHLTSWTWYLICGVVLGFLASFLGIGGGPVNVSLLMLMFALPIKEATLYS 180


>gi|300853972|ref|YP_003778956.1| hypothetical protein CLJU_c07860 [Clostridium ljungdahlii DSM
           13528]
 gi|300434087|gb|ADK13854.1| putative membrane protein [Clostridium ljungdahlii DSM 13528]
          Length = 252

 Score = 36.6 bits (83), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 19/186 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II+  F+ G   G  G GG   ++ +L+  F          +HV++GT+L  +  +S+  
Sbjct: 5   IILVMFIVGIALGFVGAGGSGFIISILTVIFGF-------TIHVSLGTALAAMIFSSISG 57

Query: 86  FMEHRRHGTINMKI-LKDWIF--VLPITTVVTSLMISHVDKSFLNKAF----AIFCLLMG 138
              H R G   +K+ L   IF  +   T+   S +I   +  ++        A+   +  
Sbjct: 58  AFSHYREGDAVLKVGLAVGIFGAIGSWTSSNFSAIIPASELKWMTSGMLYLSALILWIRM 117

Query: 139 ILMLKRDRLYCERKFPDNYVKYIW----GMVTGFLSGALGVGGGIFTNL-LMLFYGASIY 193
            ++ KR     +   P+    +I     G+VTG +SG  G+G   F  + LM   G S+ 
Sbjct: 118 FIIEKRHSSQDKNSLPNGMSFWIRACGIGLVTGTISGLFGIGSACFIQIGLMFILGMSVR 177

Query: 194 KATATS 199
           ++  T+
Sbjct: 178 QSVGTT 183


>gi|282899001|ref|ZP_06306983.1| protein of unknown function DUF81 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281196141|gb|EFA71056.1| protein of unknown function DUF81 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 275

 Score = 36.6 bits (83), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 32/187 (17%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ + SF +G +  L G+GGG+V+VP+L+  F   G+D    +  A+G SL  +  TS+
Sbjct: 5   VLVWMGSFSAGLVGSLTGLGGGVVIVPLLTSVF---GVD----IRYAIGASLVSVIATSL 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S   + + G  N+++         I  VV + + + V   FL    A   +    L   
Sbjct: 58  GSASTYIKKGFTNIRLGMFLEVASTIGAVVGASIATLVSVKFLTIILAFVLIYSAYLSQI 117

Query: 144 RDRLYCERKFPDNYVKYIW-------------------------GMVTGFLSGALGVGGG 178
                 E   PD   +Y+                           ++ G +SG LG+G G
Sbjct: 118 PKTESVEVVKPDPLAEYLQLNGTYPINDGVMSYNVNFLPAGFSIMLLAGIVSGLLGIGSG 177

Query: 179 IFTNLLM 185
            F  L M
Sbjct: 178 AFKVLAM 184


>gi|269960680|ref|ZP_06175052.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269834757|gb|EEZ88844.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 258

 Score = 36.6 bits (83), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 19/174 (10%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM--HVAMGTSLGVIAPTSVMSF 86
            S ++ TL+ L G G GL+  P+L      +G+  S+ +  H     +LG+ A ++    
Sbjct: 19  GSLIANTLASLSGGGAGLLQFPLLI----FLGLPFSVALGTHKVASVALGLGAAST---- 70

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             H + GTI  K+    I V  I  V+ + +I  +  +   K      L +GI    + +
Sbjct: 71  --HLKAGTIKPKVALYLILVGSIGVVIGANLIVQIPDNIAEKMLGAMILALGIYSRFKKQ 128

Query: 147 LYCERKFPDNYVKYIW------GMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
           L  + + P +   + W       M  G ++G+L  G G+   L ++ +    YK
Sbjct: 129 L-GQTEIPTHRDTFGWIVGGLGLMFIGVVNGSLTAGSGLLVTLFLVRWFGYDYK 181


>gi|294500703|ref|YP_003564403.1| hypothetical protein BMQ_3957 [Bacillus megaterium QM B1551]
 gi|294350640|gb|ADE70969.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
          Length = 249

 Score = 36.6 bits (83), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 38/194 (19%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G + G  G GG   ++ +L+  +        + +HVA+ T+L  +  +S+   + H R G
Sbjct: 13  GLILGFVGAGGSGFIISILTLLY-------GVSVHVALATALTAMIFSSLSGAVSHYREG 65

Query: 94  TINMK---------ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +++K          L  WI          S + S + +  L    A   LL G+L+  R
Sbjct: 66  NVSLKSGISVGILGALGAWI---------GSNLSSFIPEGELKWLTAGMLLLSGVLLWLR 116

Query: 145 ----DRLYCERKFPD--NYVKY--IWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
                R   ER  P    +V Y  + G++TG LSG  G+G   F  L LM+  G SI + 
Sbjct: 117 MFLFSRQQKERTIPTGAKFVVYSLLIGLITGALSGMFGIGSTPFIQLGLMMVLGLSIRQ- 175

Query: 196 TATSAGVSALIAFP 209
              SAG + L+  P
Sbjct: 176 ---SAGTTMLVIIP 186


>gi|323488645|ref|ZP_08093887.1| hypothetical protein GPDM_04854 [Planococcus donghaensis MPA1U2]
 gi|323397663|gb|EGA90467.1| hypothetical protein GPDM_04854 [Planococcus donghaensis MPA1U2]
          Length = 275

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)

Query: 15  SKDCVVDY-ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +K+ V  Y I   ++ +F  G  SGLFG+GGG ++VP +   F           HVA+GT
Sbjct: 147 NKEYVYGYPIWFALLLTFFVGVASGLFGIGGGSIIVPAMILLFLF-------PPHVAVGT 199

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           S+ ++  +++++ + H   G +       WI+ L +
Sbjct: 200 SMLMVFLSALVNSVTHISLGNV------PWIYTLAV 229


>gi|284046974|ref|YP_003397314.1| hypothetical protein Cwoe_5534 [Conexibacter woesei DSM 14684]
 gi|283951195|gb|ADB53939.1| protein of unknown function DUF81 [Conexibacter woesei DSM 14684]
          Length = 309

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 9/105 (8%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G L G+ G+GGG +M P+L     ++G   +     A+GT L   A T  +    H R G
Sbjct: 14  GLLVGMTGIGGGSLMTPLL---ILVLGTAPT----TAIGTDLAYAAVTKTVGGWRHWRRG 66

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHV-DKSFLNKAFAIFCLLM 137
           +++M I   W+ V  I   +  + + HV +K+    +F  F L +
Sbjct: 67  SVDMTIAL-WLAVGSIPGALGGVQVLHVLEKALGGDSFDTFLLTL 110


>gi|146307159|ref|YP_001187624.1| hypothetical protein Pmen_2132 [Pseudomonas mendocina ymp]
 gi|145575360|gb|ABP84892.1| protein of unknown function DUF81 [Pseudomonas mendocina ymp]
          Length = 254

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 7/65 (10%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           +SG + GLFGVGG +V  PVL+  F    +       VA G SL +  P++ ++ + +  
Sbjct: 145 VSGAMGGLFGVGGAVVATPVLTSVFGTTQV-------VAQGLSLSLALPSTGVTLLTYAL 197

Query: 92  HGTIN 96
           H  +N
Sbjct: 198 HHHVN 202


>gi|23099829|ref|NP_693295.1| hypothetical protein OB2374 [Oceanobacillus iheyensis HTE831]
 gi|22778060|dbj|BAC14330.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 285

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 8/76 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +I  I +A F+ G LSGLFG+GGG +MVPV+   F           H+A  TS+ +I 
Sbjct: 166 LSFISAISIALFV-GMLSGLFGIGGGAIMVPVMMLLF-------GFPAHLAAATSMFMII 217

Query: 80  PTSVMSFMEHRRHGTI 95
             S M  + H   G +
Sbjct: 218 FVSFMGSITHIYLGNV 233


>gi|209694679|ref|YP_002262607.1| membrane protein [Aliivibrio salmonicida LFI1238]
 gi|208008630|emb|CAQ78813.1| membrane protein [Aliivibrio salmonicida LFI1238]
          Length = 256

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 90/206 (43%), Gaps = 23/206 (11%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           +F++G +  + G GGG++ VP L        +   +  H+A+GT+       S  + + +
Sbjct: 16  AFVAGFIDAVAG-GGGMLTVPAL--------LSIGLPPHIALGTNKLAATFASSTAAITY 66

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
            +    + +  K       +     +L+++++   +L K   +  L   I  +  +RL  
Sbjct: 67  FKKKLFDPQFWKASFIATLLGATCGTLLVNYISTEWLEKGLPLIILGAAIYTIWPNRLIS 126

Query: 150 ER-KFPDNYVKY-----IWGMVTGFLSGALGVGGGIFTNL-------LMLFYGASIYKAT 196
           E+ + P+   K+     I G+  GF  G  G G G F  +       L +   + + KA 
Sbjct: 127 EQNQLPEKTPKFKKQQIIQGLSLGFYDGVAGPGTGAFWTVSSMALYRLNILLASGLAKAM 186

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLN 222
             ++ +++L+ F A+L +I    GL 
Sbjct: 187 NFTSNITSLVTF-AILGQINWALGLT 211


>gi|189218632|ref|YP_001939273.1| permease [Methylacidiphilum infernorum V4]
 gi|189185490|gb|ACD82675.1| Predicted permease [Methylacidiphilum infernorum V4]
          Length = 267

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 3/81 (3%)

Query: 141 MLKRDRL--YCERKFPDNYVK-YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           ML R +L      ++    +K Y+ G V  FL G  GVGGG  T  L++  G     A  
Sbjct: 1   MLCRGKLIINIRYRYSRELMKFYLIGFVIAFLIGLTGVGGGTITVPLLIILGIEPSIAVG 60

Query: 198 TSAGVSALIAFPALLVRIYSG 218
            S G SALI  P+ +V  + G
Sbjct: 61  ISLGFSALIKIPSSIVYFFKG 81


>gi|196044637|ref|ZP_03111872.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|225865656|ref|YP_002751034.1| hypothetical protein BCA_3772 [Bacillus cereus 03BB102]
 gi|196024672|gb|EDX63344.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|225790833|gb|ACO31050.1| putative membrane protein [Bacillus cereus 03BB102]
          Length = 267

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHG----TINMKILKDWIFVLPITTVVTSLMISH 120
           I +HVA+ TSL  +A T++   + H R G    TI   +     F   I + + S +  +
Sbjct: 51  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSFIPPY 110

Query: 121 VDKSFLNKAFAIFCLLMGILMLK--RDRLYCERKFPD----NYVKYI-WGMVTGFLSGAL 173
           +   F      +  + M I ++K   +   C  K  D    N +K I  G+VTG ++G+ 
Sbjct: 111 LLHWFTAGMLFLSAIFMCIKLIKFQNEEEVCLVKIKDISKENIMKCICLGLVTGMMAGSF 170

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I +    S G + L+  P     I  G G        LG+ 
Sbjct: 171 GIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----IAIGGG--------LGYS 213

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           + G +  IL + +LI    T L   IG K+      + + FSMIM
Sbjct: 214 SEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRMLLKFSMIM 255


>gi|183599679|ref|ZP_02961172.1| hypothetical protein PROSTU_03168 [Providencia stuartii ATCC 25827]
 gi|188021933|gb|EDU59973.1| hypothetical protein PROSTU_03168 [Providencia stuartii ATCC 25827]
          Length = 276

 Score = 36.6 bits (83), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 40/261 (15%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y+ L  VA F +G +  + G GGGL+ +P L        +   I    A+ T+       
Sbjct: 21  YLLLFCVALF-AGFIDSIAG-GGGLLTIPAL--------LSVGITPVEALATNKLQAVGG 70

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTV---VTSLMISHVDKSFLNKAFAIFCLLMG 138
           S  S +   R   IN   L++ +F   +T +   + +++I  ++  FL +   I  + +G
Sbjct: 71  SFSSSLYFVRRKAIN---LREQMFPFIMTIIGAMLGAILIQMINTDFLKQLLPIMVICVG 127

Query: 139 ILML------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGAS 191
           +  L       +DR   +++          GM  GF  GA G G G F  L  +L  G +
Sbjct: 128 LYFLLTPSIGAQDR---KQRISMPVFGVAVGMTMGFYDGAFGPGTGSFLALGYVLLLGYN 184

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILP 242
           + KATA +  ++    F +L+  I  G  L     W LGFV          +GA L++  
Sbjct: 185 LAKATAHAKLLNFASNFGSLIFFIIGGHVL-----WVLGFVMLIGQMVGARLGARLVLTK 239

Query: 243 ISILITPLATKLSYMIGKKYL 263
              LI P+   +S ++  K L
Sbjct: 240 GQKLIRPMIVIISLLMSIKLL 260


>gi|18976740|ref|NP_578097.1| hypothetical protein PF0368 [Pyrococcus furiosus DSM 3638]
 gi|18892327|gb|AAL80492.1| hypothetical protein PF0368 [Pyrococcus furiosus DSM 3638]
          Length = 251

 Score = 36.6 bits (83), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 8/65 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G L+ +FG+GGG ++VP L+    ++G++    +H A+GTS   I  TS+ S + + R  
Sbjct: 12 GILAAMFGLGGGFLIVPTLN----ILGVE----IHSAIGTSSASIVFTSLSSSIAYSRQR 63

Query: 94 TINMK 98
           I+ +
Sbjct: 64 RIHYR 68


>gi|229817013|ref|ZP_04447295.1| hypothetical protein BIFANG_02268 [Bifidobacterium angulatum DSM
           20098]
 gi|229785758|gb|EEP21872.1| hypothetical protein BIFANG_02268 [Bifidobacterium angulatum DSM
           20098]
          Length = 280

 Score = 36.6 bits (83), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 20/117 (17%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +C+++    ++G  SG+FG+GGG V+VP L        +   +    A  TS+  I  TS
Sbjct: 16  LCILLAVGLIAGLFSGMFGIGGGTVIVPAL--------VWIGLTQRQAAATSICAIIITS 67

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPIT------TVVTSLMISHVDKSFLNKAFAIF 133
           +   + +   G +      DWI  L +       + + S ++S + + FL   + +F
Sbjct: 68  ISGVISYAHGGDV------DWIAALLLAVGMMVGSQIGSWLLSRLSEVFLRWFYVVF 118


>gi|225017187|ref|ZP_03706379.1| hypothetical protein CLOSTMETH_01113 [Clostridium methylpentosum
           DSM 5476]
 gi|224950106|gb|EEG31315.1| hypothetical protein CLOSTMETH_01113 [Clostridium methylpentosum
           DSM 5476]
          Length = 117

 Score = 36.6 bits (83), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 20/124 (16%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IV   ++G L+GLFG GGG+ +VP+L  A         I    +  TS+ +IA  SV+S 
Sbjct: 8   IVTGAVAGLLNGLFGAGGGVAVVPLLEHA--------GIEARKSHATSIAIIAALSVVSA 59

Query: 87  MEHRRHGTINMKILKDWIFVLP------ITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +  +G        D+   LP      +  VV + ++  +    L + F    +L  I 
Sbjct: 60  AFYLFNGKF------DFWQALPYLPFGLVGAVVGAKLLPKIPNKLLKRIFGGVMILSAIR 113

Query: 141 MLKR 144
           +L R
Sbjct: 114 LLLR 117


>gi|229590192|ref|YP_002872311.1| hypothetical protein PFLU2728 [Pseudomonas fluorescens SBW25]
 gi|229362058|emb|CAY48959.1| putative membrane protein [Pseudomonas fluorescens SBW25]
          Length = 261

 Score = 36.6 bits (83), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 18/140 (12%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +VA  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T     
Sbjct: 9   VVAGLIVGFIVGMTGVGGGSLMTPIL----LWFGINPA----TAVGTDLLYAAITKSGGV 60

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMI---SHVDKSFLN----KAFAIFCLLMGI 139
           + H ++  I+  I   W+ +  +  V+ +L      H D S +N    +A  +  LL  +
Sbjct: 61  LVHGKNKNIDWTI-TGWLTLGSVPAVLLTLWFLASLHTDPSAMNAVIKQALGVVLLLTAL 119

Query: 140 LMLKRDRL--YCERKFPDNY 157
            +L +  L  + +R   D+Y
Sbjct: 120 AILFKKSLLAFAQRHAGDDY 139


>gi|319785588|ref|YP_004145064.1| hypothetical protein Mesci_6007 [Mesorhizobium ciceri biovar
          biserrulae WSM1271]
 gi|317171476|gb|ADV15014.1| protein of unknown function DUF81 [Mesorhizobium ciceri biovar
          biserrulae WSM1271]
          Length = 307

 Score = 36.6 bits (83), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG ++ P+L        I  +I   +A+ T    +  +SV   + H + G
Sbjct: 25 GFLSGMFGVGGGFLITPLL--------IFYNIPPAIAVATGANQVIASSVSGVLSHMKRG 76

Query: 94 TINMKI 99
          T+++K+
Sbjct: 77 TLDLKL 82


>gi|238025213|ref|YP_002909445.1| putative permease [Burkholderia glumae BGR1]
 gi|237879878|gb|ACR32210.1| Predicted permease [Burkholderia glumae BGR1]
          Length = 268

 Score = 36.6 bits (83), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 8/101 (7%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G ++GL GVGGG ++VP+L K         ++ MH  + TSL VIA   V        
Sbjct: 157 VTGFMTGLLGVGGGFIIVPMLRK-------LTNVSMHGVVATSLMVIALVGVGGIASTIA 209

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISH-VDKSFLNKAFA 131
           HGT     +  W  V     ++   + SH +   ++   FA
Sbjct: 210 HGTPVPAQVAIWFSVTTAVGMLAGRLASHRLADRYVQAGFA 250


>gi|295706047|ref|YP_003599122.1| hypothetical protein BMD_3941 [Bacillus megaterium DSM 319]
 gi|294803706|gb|ADF40772.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 249

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 38/194 (19%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G + G  G GG   ++ +L+  +        + +H+A+ T+L  +  +S+   + H R G
Sbjct: 13  GLILGFVGAGGSGFIISILTLLY-------GVSVHIALATALTAMIFSSLSGAVSHYREG 65

Query: 94  TINMK---------ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +++K          L  WI          S + S + +  L    A   LL G+L+  R
Sbjct: 66  NVSLKSGISVGILGALGAWI---------GSNLSSFIPEGELKWLTAGMLLLSGVLLWLR 116

Query: 145 ----DRLYCERKFPD--NYVKY--IWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
                R   ER  P    +V Y  + G++TG LSG  G+G   F  L LM+  G SI + 
Sbjct: 117 MFLFSRQQKERTVPTGAKFVAYSLLIGLITGALSGMFGIGSTPFIQLGLMMVLGLSIRQ- 175

Query: 196 TATSAGVSALIAFP 209
              SAG + L+  P
Sbjct: 176 ---SAGTTMLVIIP 186


>gi|306824100|ref|ZP_07457472.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
 gi|309801835|ref|ZP_07695953.1| putative membrane protein [Bifidobacterium dentium JCVIHMP022]
 gi|304552636|gb|EFM40551.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
 gi|308221589|gb|EFO77883.1| putative membrane protein [Bifidobacterium dentium JCVIHMP022]
          Length = 304

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 14/80 (17%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++++   + G LSG+FG+GGG V+VP L        +   +    A  TS+  I PTS+ 
Sbjct: 51  VLVIVGMIVGLLSGMFGIGGGTVIVPAL--------VWLGLSQRHAAATSMLAIVPTSIS 102

Query: 85  SFMEHRRHGTINMKILKDWI 104
             + +  +G +      DW+
Sbjct: 103 GVISYAHNGNV------DWV 116


>gi|167855976|ref|ZP_02478723.1| DNA-binding transcriptional regulator OxyR [Haemophilus parasuis
           29755]
 gi|219871886|ref|YP_002476261.1| permease [Haemophilus parasuis SH0165]
 gi|167852913|gb|EDS24180.1| DNA-binding transcriptional regulator OxyR [Haemophilus parasuis
           29755]
 gi|219692090|gb|ACL33313.1| permease [Haemophilus parasuis SH0165]
          Length = 268

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I ++I    L+  +S LFG+GGG++MVP+L   F          + +   TSL  + 
Sbjct: 3   ITTILILIACGILTNLMSALFGIGGGVLMVPILHTLF------PEFSLQMVAATSLMTVM 56

Query: 80  PTSVMSFME-HRRHGTINMKILKDW 103
            T+ ++ +  +++   + MK L  W
Sbjct: 57  GTAAINLVYFYKQRVPVKMKSLLLW 81


>gi|154685676|ref|YP_001420837.1| YjnA [Bacillus amyloliquefaciens FZB42]
 gi|154351527|gb|ABS73606.1| YjnA [Bacillus amyloliquefaciens FZB42]
          Length = 254

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 29/180 (16%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I+   F  GTL GL GVGG  ++ P+L     ++GI+ SI    A+GT L   + T +  
Sbjct: 5   IVFMGFFVGTLVGLTGVGGAALLTPLLI----VLGINPSI----AVGTDLLYNSITKLFG 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-------DKSFLNKAFAIFCLLMG 138
            + H +  T+  K++  ++ +  I +   ++ + H+        +  + +A      L+ 
Sbjct: 57  VVSHWKQRTVQFKLV-GYLALGSIPSATAAIGVLHLFPAFHQHQEQIIKQALGYVLTLVA 115

Query: 139 ILMLKRDRLYCERKFPDNYVKY-----------IWGMVTGFLSGALGVGGGIFTNLLMLF 187
           I ++   RL+ ++K   N  +            + G++ GF+ G   +G G    + ML+
Sbjct: 116 ISIIA--RLFFDKKLRPNRWQQKTLEEKRTLMILIGVIFGFIVGLTSIGSGSLFAIAMLY 173


>gi|220929939|ref|YP_002506848.1| permease [Clostridium cellulolyticum H10]
 gi|220000267|gb|ACL76868.1| permease [Clostridium cellulolyticum H10]
          Length = 123

 Score = 36.6 bits (83), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 7/116 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+    +G  +GLFG GGG + VP +     L+  D+    H A  T+L +I P +++S 
Sbjct: 14  ILTGLAAGVANGLFGSGGGTIAVPAM---VFLLDADE----HKAHATALLIILPLTLVST 66

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +  +  ++  I    +    +   + + +++    + L K F IF +L  I M+
Sbjct: 67  YFYLSNNYVDWNITWKAMAGGVVGGAIGAFLLNKCPSNVLRKIFGIFMILAAIRMI 122


>gi|326943512|gb|AEA19405.1| Permease [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 257

 Score = 36.6 bits (83), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 25/169 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II+  F+ G L G+ G+GG  ++ P L      +GI  S    VA+GT L   + T +  
Sbjct: 5   IIMMGFIIGGLVGVTGIGGAALLTPFLLT----LGISPS----VAVGTDLVYNSITKMFG 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG-ILMLKR 144
             +H +  TIN K++K ++ +  + + + +++I H    F +    I   ++G +L+L  
Sbjct: 57  ISQHWKQKTINFKLVK-YLAIGSLPSAIIAVIIIHFLPIFHDNREGIIKYILGYVLILAA 115

Query: 145 DRLYCERKFPDNYVKYIW---------------GMVTGFLSGALGVGGG 178
             ++ +  F +   +  +               G + GF+ G   VG G
Sbjct: 116 ISIFIKTFFYNESTQSFFQKQTMVQKKNLTILIGAILGFIVGLTSVGSG 164


>gi|312892141|ref|ZP_07751639.1| protein of unknown function DUF81 [Mucilaginibacter paludis DSM
          18603]
 gi|311295392|gb|EFQ72563.1| protein of unknown function DUF81 [Mucilaginibacter paludis DSM
          18603]
          Length = 277

 Score = 36.6 bits (83), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 45/76 (59%), Gaps = 7/76 (9%)

Query: 24 CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           +I++ ++ +G +  L G+GGG+V++P+L+    L+ +D    +H A+G SL  +  TS 
Sbjct: 8  TIILIGAYAAGLVGSLTGLGGGVVIIPLLT---VLLHVD----IHYAIGASLVSVIATSS 60

Query: 84 MSFMEHRRHGTINMKI 99
           S   + + G  NM++
Sbjct: 61 GSASAYVKEGITNMRL 76


>gi|317052523|ref|YP_004113639.1| hypothetical protein Selin_2367 [Desulfurispirillum indicum S5]
 gi|316947607|gb|ADU67083.1| protein of unknown function DUF81 [Desulfurispirillum indicum S5]
          Length = 264

 Score = 36.6 bits (83), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 17/169 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L +    ++G L+ L G+GGG++ VPVL+     +  +    + VA+ TSL V+  +S
Sbjct: 8   IPLFLALGAITGFLAALLGIGGGIIYVPVLTFMLPWLTGNGDDFIRVAIATSLLVVLLSS 67

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S + + R   +++ +L+  +    I   + S   + +  + L  +FA+    +G  ++
Sbjct: 68  ISSSLANLRAHNVHLPLLRRALVSGLIGAFIGSQFGTLLPAALLKISFALLLFYVGYRLM 127

Query: 143 K----------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
                       D L   R FP +         TG ++   GVGGG F+
Sbjct: 128 ASAGKPEYVDGEDILDWRRVFPIS-------AFTGLITSTFGVGGGFFS 169


>gi|219853959|ref|YP_002471081.1| hypothetical protein CKR_0616 [Clostridium kluyveri NBRC 12016]
 gi|219567683|dbj|BAH05667.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 283

 Score = 36.6 bits (83), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 39/233 (16%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  D +   I  I + S ++G +  + G+GGG V+ P L+  F   GID    +  A+G 
Sbjct: 1   MGDDLLSLLILQIFIISIVAGIVGSILGLGGGTVITPALTILF---GID----IKYAIGA 53

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           SL  +  TS  S + + R    N++I         +  +  + +   ++  +L   F I 
Sbjct: 54  SLISVIATSSGSAVAYIRDKLTNIRIGMFLEIATTLGAITGAFLGGIINPYYLYFLFGIL 113

Query: 134 CLLMGILMLKRDRLYCER-------------------KFPDNYVKY-IWGMVTGF----- 168
            L     M K+ R+                       KF +  + Y + G+ +GF     
Sbjct: 114 LLYSAFAMFKKGRMESTEIIETHPLAEKLKLNGQYHDKFLNEDISYKVSGVPSGFGVMYG 173

Query: 169 ---LSGALGVGGGIFTNLLM-LFYGASIYKATATSA---GVSALIAFPALLVR 214
              +SG LG+G G F  + M LF    +  ++ATS    GV+A  +    L+R
Sbjct: 174 AGIISGLLGIGSGSFKVMAMDLFMKLPLKVSSATSNFMMGVTATASAGIYLLR 226


>gi|254467781|ref|ZP_05081187.1| hypothetical protein KB13_5 [beta proteobacterium KB13]
 gi|207086591|gb|EDZ63874.1| hypothetical protein KB13_5 [beta proteobacterium KB13]
          Length = 258

 Score = 36.6 bits (83), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L  ++ F+ G L GL GVGGG +M P+L   F+       +   +A+GT L   + T  +
Sbjct: 2   LFTLSGFIIGLLIGLTGVGGGSLMTPLLMLFFK-------VPAAIAVGTDLLYASITKSV 54

Query: 85  SFMEHRRHGTINMKILKD 102
              +H++ G I   I+KD
Sbjct: 55  GIFKHQKLGHIEWPIVKD 72


>gi|313204527|ref|YP_004043184.1| hypothetical protein Palpr_2062 [Paludibacter propionicigenes WB4]
 gi|312443843|gb|ADQ80199.1| protein of unknown function DUF81 [Paludibacter propionicigenes
           WB4]
          Length = 259

 Score = 36.6 bits (83), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 28/44 (63%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQ 57
           +S + +     + IV    +G ++GLFG GGGLV+VPVL K F+
Sbjct: 133 ISGEKIQRSFWIYIVVGIFAGIIAGLFGKGGGLVIVPVLIKFFR 176


>gi|120404979|ref|YP_954808.1| hypothetical protein Mvan_4025 [Mycobacterium vanbaalenii PYR-1]
 gi|119957797|gb|ABM14802.1| protein of unknown function DUF81 [Mycobacterium vanbaalenii PYR-1]
          Length = 291

 Score = 36.6 bits (83), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 7/120 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I+    + G ++GL G GGG ++VP L+    L+G    + M +A+GTSL VIA  S   
Sbjct: 134 ILAEGLIVGLVTGLVGAGGGFLVVPALA----LLG---GLPMPIAVGTSLIVIAMKSFAG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +     IN  +         I  ++ + + + ++   L K F  F L+M  ++L ++
Sbjct: 187 LAGYLTSVHINWTLALAVTAAAVIGALIGARLTAMINPDSLRKTFGWFVLVMSSVILAQE 246


>gi|145221576|ref|YP_001132254.1| hypothetical protein Mflv_0983 [Mycobacterium gilvum PYR-GCK]
 gi|145214062|gb|ABP43466.1| protein of unknown function DUF81 [Mycobacterium gilvum PYR-GCK]
          Length = 291

 Score = 36.6 bits (83), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 7/120 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I+    L G ++GL G GGG ++VP L+    L+G    + M VA+GTSL VIA  S   
Sbjct: 134 ILAEGLLVGLVTGLVGAGGGFLVVPALA----LLG---GLPMPVAVGTSLIVIAMKSFAG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +     I+  +         +  ++ + + S V+   L KAF  F L M  ++L ++
Sbjct: 187 LGGYLSSVQIDWSLALAVTAAAVVGALLGARLTSMVNPDSLRKAFGWFVLAMSSVILAQE 246


>gi|193213378|ref|YP_001999331.1| hypothetical protein Cpar_1739 [Chlorobaculum parvum NCIB 8327]
 gi|193086855|gb|ACF12131.1| conserved hypothetical protein [Chlorobaculum parvum NCIB 8327]
          Length = 120

 Score = 36.6 bits (83), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 15/113 (13%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPTSVMSFMEHRR 91
           +G LSG+FGVGGG+++VP L   F   G++       A GTSL  ++ P  ++  +E+ R
Sbjct: 13  AGLLSGMFGVGGGVIIVPALVFFF---GMNQ----QAANGTSLIALLLPVGLLGVLEYYR 65

Query: 92  HGTINMKILKDWI-----FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            G I M+    W      F L       + +   V    L + FA+F + + I
Sbjct: 66  SGNIAMQ--NIWFGLTIAFGLFAGAFFGAHLAIEVSSELLRRMFAVFLVFVAI 116


>gi|171185687|ref|YP_001794606.1| hypothetical protein Tneu_1233 [Thermoproteus neutrophilus V24Sta]
 gi|170934899|gb|ACB40160.1| protein of unknown function DUF81 [Thermoproteus neutrophilus
           V24Sta]
          Length = 242

 Score = 36.2 bits (82), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 62/143 (43%), Gaps = 31/143 (21%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F+ G  S LFGVGGG V VP L       G+D       A   S+G+I PT+V S   + 
Sbjct: 128 FIGGFASSLFGVGGGTVFVPTL---MLTSGLD----AKRAAAMSMGIIFPTAVSSVATYA 180

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD---RL 147
             G +++         L   TV  S + S++   +          +MG   L+RD   RL
Sbjct: 181 ALGVLDVS--------LAAATVAGSFVGSYISSRY----------IMG--KLRRDAVRRL 220

Query: 148 YCERKFPDNYVKYIWGMVTGFLS 170
           +    +    V Y+W  +  FL+
Sbjct: 221 FVGYVYAVG-VYYLWSYLALFLT 242


>gi|295694878|ref|YP_003588116.1| protein of unknown function DUF81 [Bacillus tusciae DSM 2912]
 gi|295410480|gb|ADG04972.1| protein of unknown function DUF81 [Bacillus tusciae DSM 2912]
          Length = 253

 Score = 36.2 bits (82), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 7/76 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I +  F  G L G  G+GGG +M P+L     L G+  S    VA+GT L   + T  + 
Sbjct: 5   ISLGGFAVGLLIGFTGMGGGFLMTPML---ILLFGVHPS----VAVGTDLVYASITKFVG 57

Query: 86  FMEHRRHGTINMKILK 101
             +H R GT++++++K
Sbjct: 58  AWQHWRQGTVDLRVVK 73


>gi|116493760|ref|YP_805494.1| permease [Lactobacillus casei ATCC 334]
 gi|191637002|ref|YP_001986168.1| Permease [Lactobacillus casei BL23]
 gi|239631015|ref|ZP_04674046.1| transport protein [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|116103910|gb|ABJ69052.1| Predicted permease [Lactobacillus casei ATCC 334]
 gi|190711304|emb|CAQ65310.1| Permease [Lactobacillus casei BL23]
 gi|239527298|gb|EEQ66299.1| transport protein [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|327381029|gb|AEA52505.1| hypothetical protein LC2W_0169 [Lactobacillus casei LC2W]
 gi|327384204|gb|AEA55678.1| hypothetical protein LCBD_0178 [Lactobacillus casei BD-II]
          Length = 280

 Score = 36.2 bits (82), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 30/139 (21%), Positives = 66/139 (47%), Gaps = 10/139 (7%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + +++V   L G L  + G+GGG+++ P+L+    LMG+     +  A+G S+  +  
Sbjct: 2   EQMIMLMVTGLLGGILGAVLGIGGGMIITPILT---MLMGLP----IQYAIGASIVSVIA 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS  + + + +   +N+++         +  V+ +++   VD   L   F    +     
Sbjct: 55  TSSGATIAYLKDEMLNLRVAMFLEIATTVGAVIGAVVTGLVDGKVLYVLFGALLIFSAFN 114

Query: 141 MLKRDRLY--CERKF-PDN 156
           M+++ R+    ER+  PD 
Sbjct: 115 MIRKMRMKEPEERQSKPDE 133


>gi|254413848|ref|ZP_05027617.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC
           7420]
 gi|196179445|gb|EDX74440.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC
           7420]
          Length = 280

 Score = 36.2 bits (82), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 41/80 (51%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           M  A+GTSL +IA  SV  F+ +     ++  ++  +I V  +  +V + +  +V    L
Sbjct: 178 MKEAVGTSLLIIACNSVAGFLGYLGQVPLDWGLMGSFIVVASVGIIVGAYLAQYVKAQQL 237

Query: 127 NKAFAIFCLLMGILMLKRDR 146
            KAF  F + +   +L ++R
Sbjct: 238 QKAFGYFLIAVAAFILVQNR 257


>gi|218245793|ref|YP_002371164.1| hypothetical protein PCC8801_0931 [Cyanothece sp. PCC 8801]
 gi|257058839|ref|YP_003136727.1| hypothetical protein Cyan8802_0958 [Cyanothece sp. PCC 8802]
 gi|218166271|gb|ACK65008.1| protein of unknown function DUF81 [Cyanothece sp. PCC 8801]
 gi|256589005|gb|ACU99891.1| protein of unknown function DUF81 [Cyanothece sp. PCC 8802]
          Length = 259

 Score = 36.2 bits (82), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 17/176 (9%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
           FG+GGG+V+VP+L        I  +     A+ TS   I  TS+    ++ R G +++  
Sbjct: 22  FGIGGGMVLVPLL--------ITLNYTPVQAVATSSLAIIITSISGSWQNWRMGYLDLNR 73

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK 159
           +    F   IT  +   + + +    L   F I  L++ I +   +     +K  +N + 
Sbjct: 74  VILLGFPALITAQIGVYIATLLPDYLLLTYFGIL-LIINIFLGNFNHQLLGKKTSNNSLN 132

Query: 160 Y-------IWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIA 207
           +         G   GFL+G  G+GGG I   L ML     I  A  TS GV  + A
Sbjct: 133 FSVTIARLATGGTAGFLAGLFGIGGGAIMVPLQMLLLNEPIKIAIQTSLGVIVITA 188


>gi|261340720|ref|ZP_05968578.1| inner membrane protein YfcA [Enterobacter cancerogenus ATCC 35316]
 gi|288317137|gb|EFC56075.1| inner membrane protein YfcA [Enterobacter cancerogenus ATCC 35316]
          Length = 269

 Score = 36.2 bits (82), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 101/247 (40%), Gaps = 27/247 (10%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           + L+G +  L G GGGL+ VP L  A         +    A+ T+       S+ + +  
Sbjct: 22  AMLAGFIDALAG-GGGLLTVPALLAA--------GMSPAQALATNKLQACGGSLSASLYF 72

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG---ILMLKRDR 146
            R   +N+   K  I +  I +   +L++ HV    L +   I  + +G   +LM K   
Sbjct: 73  IRRKVVNLADQKLNIAMTFIGSTAGALLVQHVQSDILRQILPILVICIGLYFLLMPKLGE 132

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSAL 205
              +R+        I G   GF  G  G G G F  L  +   G ++ K+TA +  ++A 
Sbjct: 133 EDRQRRLHGLPFALIAGGCVGFYDGFFGPGAGSFYALAFVTLAGFNLAKSTAHAKVLNAT 192

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILPISILITPLATKLSY 256
                LL+ I  G  +     W+ GFV           G+ L++     LI P+   +S 
Sbjct: 193 SNVGGLLLFIIGGKVI-----WATGFVMMVGQFLGARAGSRLVLSKGQKLIRPMIVIVSA 247

Query: 257 MIGKKYL 263
           ++  K L
Sbjct: 248 VMSAKLL 254


>gi|237753187|ref|ZP_04583667.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375454|gb|EEO25545.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 255

 Score = 36.2 bits (82), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 115/276 (41%), Gaps = 38/276 (13%)

Query: 1   MYDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG 60
           M +L+ NF   + L          L+ VA+F++G +  + G GGG++ +P L     L G
Sbjct: 1   MQELIANFDFYMLL----------LLFVAAFVAGFIDSIAG-GGGMITIPAL----LLAG 45

Query: 61  IDDSICMHV-AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           I     +    + +S G  + T     ++  + G IN+K    +  +  + + V ++ + 
Sbjct: 46  ISPLQALATNKLQSSFGSFSAT-----LQFYKKGYINLKSGLPFAVIAFVFSAVGTISVQ 100

Query: 120 HVDKSFLNKAFAIFCLLMGILML---KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
           +++  FL+K      L+ G+  L       +   +K    Y+      V GF  G  G G
Sbjct: 101 YIEVEFLSKVLPFLILIFGLYFLFSPSIKEVEQTKKLNRAYLSLAIAAV-GFYDGFFGPG 159

Query: 177 GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV---- 232
            G F  L ++  G         S G + L  F   L  +   + L G   WS+G +    
Sbjct: 160 TGSFFMLALIVIGGF---NVIQSLGQAKLYNFSTNLASLIF-FALGGHMLWSIGLLMALG 215

Query: 233 -----NIGAVLIILPISILITPLATKLSYMIGKKYL 263
                N+G+ + +     ++ PL   +S+++  K L
Sbjct: 216 QFIGANLGSKMAMRYGIRIVKPLVVGISFLMAAKLL 251


>gi|254510226|ref|ZP_05122293.1| membrane protein [Rhodobacteraceae bacterium KLH11]
 gi|221533937|gb|EEE36925.1| membrane protein [Rhodobacteraceae bacterium KLH11]
          Length = 321

 Score = 36.2 bits (82), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG +M P+L      +GI  +    VA+ T    I  +S    + H R  
Sbjct: 40 GILSGMFGVGGGFLMTPLLF----FIGIPPA----VAVATEANQIVASSFSGVLAHFRRR 91

Query: 94 TINMKI 99
          T+++K+
Sbjct: 92 TVDLKM 97


>gi|332701882|ref|ZP_08421970.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
          Walvis Bay]
 gi|332552031|gb|EGJ49075.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
          Walvis Bay]
          Length = 342

 Score = 36.2 bits (82), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 8/74 (10%)

Query: 26 IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
          +++  F  GT+ G FG+GG  ++ P L+    ++G      M  A+GT +  IA  S++S
Sbjct: 20 LVLIGFSVGTIGGFFGMGGAWMVTPGLN----ILGFP----MAFAIGTDMAHIAGKSMIS 71

Query: 86 FMEHRRHGTINMKI 99
           M H + G ++ K+
Sbjct: 72 TMRHSKFGNVDYKL 85


>gi|269925162|ref|YP_003321785.1| protein of unknown function DUF81 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269788822|gb|ACZ40963.1| protein of unknown function DUF81 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 309

 Score = 36.2 bits (82), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 26/181 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I +A  L G L G+ G+G G +M P+L     ++ +  S+    A+G+ L     T V  
Sbjct: 56  IALAGLLVGILVGMTGMGSGALMAPLL---ILILKVKPSL----AIGSDLVYATITKVFG 108

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVV---TSLMISHVD-----KSFLNKAFAIFCLLM 137
             +H +HG+++++ L  W+ +  +   +    S+ + H       + F+ K  AI  +L+
Sbjct: 109 AFQHYKHGSVHVR-LTAWLAIGSVPGALLGAESVELIHRSYGDDAEHFITKVLAITFMLV 167

Query: 138 GILMLKRDRLYCERKFPDNYVKY---------IWGMVTGFLSGALGVG-GGIFTNLLMLF 187
              ++ R  L  +     N   +         I G   GFL G   VG G +   +L++F
Sbjct: 168 STSIILRTFLPIKSYSKANMENFSLTRKILTPILGFFVGFLVGLTSVGSGSLLMPILIMF 227

Query: 188 Y 188
           Y
Sbjct: 228 Y 228


>gi|221321922|ref|ZP_03603216.1| hypothetical protein BsubsS_03204 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|255767147|ref|NP_388450.2| integral inner membrane protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|321314224|ref|YP_004206511.1| permease [Bacillus subtilis BSn5]
 gi|239938763|sp|O05493|YDHB_BACSU RecName: Full=UPF0721 transmembrane protein ydhB
 gi|225184774|emb|CAB12388.2| putative integral inner membrane protein [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|291483005|dbj|BAI84080.1| hypothetical protein BSNT_00982 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320020498|gb|ADV95484.1| permease [Bacillus subtilis BSn5]
          Length = 245

 Score = 36.2 bits (82), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 13/145 (8%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI--------LKDWIFVLPITTVVTSL 116
           I +H A+GTSL  +A TS+     H R G I MKI             F   +T+ + + 
Sbjct: 35  IPIHTALGTSLAGMAFTSLSGAYSHYREGNIQMKIGLIVGGFAAVGSFFGAKLTSFIPAD 94

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK-YIWGMVTGFLSGALGV 175
           ++ ++    L   F    L++  L + +++    +     Y +  I G+  G LSG  G+
Sbjct: 95  LLHYLTAGML---FLSAILILIRLFILKEKAQVNQSTLSTYTRAVILGIAAGVLSGTFGI 151

Query: 176 GGGIFTNL-LMLFYGASIYKATATS 199
           G   F  + LM+    SI  +  T+
Sbjct: 152 GSAPFIQIGLMIMLNLSIRHSVGTT 176


>gi|301055163|ref|YP_003793374.1| membrane protein [Bacillus anthracis CI]
 gi|300377332|gb|ADK06236.1| conserved hypothetical membrane protein [Bacillus cereus biovar
           anthracis str. CI]
          Length = 267

 Score = 36.2 bits (82), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHG----TINMKILKDWIFVLPITTVVTSLMISH 120
           I +HVA+ TSL  +A T++   + H R G    TI   +     F   I + + SL+  +
Sbjct: 51  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSLIPPY 110

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCER--KFPD----NYVKYI-WGMVTGFLSGAL 173
           +   F      +  + M I ++K       R  K  D    N +K I  G+VTG ++G+ 
Sbjct: 111 LLHWFTAGMLFLSAIFMCIKLIKFQNEEEVRLVKIKDISKENIMKCICLGLVTGMMAGSF 170

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I +    S G + L+  P     I  G G        LG+ 
Sbjct: 171 GIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----IAIGGG--------LGYS 213

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           + G +  IL + +LI    T L   IG KY      + + FSMIM
Sbjct: 214 SEGYLDYILLLQVLI---GTMLGAYIGAKYTNYAPRMLLKFSMIM 255


>gi|171741794|ref|ZP_02917601.1| hypothetical protein BIFDEN_00889 [Bifidobacterium dentium ATCC
           27678]
 gi|283457004|ref|YP_003361568.1| hypothetical protein BDP_2187 [Bifidobacterium dentium Bd1]
 gi|171277408|gb|EDT45069.1| hypothetical protein BIFDEN_00889 [Bifidobacterium dentium ATCC
           27678]
 gi|283103638|gb|ADB10744.1| Conserved hypothetical membrane spanning protein with DUF81 domain
           [Bifidobacterium dentium Bd1]
          Length = 304

 Score = 36.2 bits (82), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 14/80 (17%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++++   + G LSG+FG+GGG V+VP L        +   +    A  TS+  I PTS+ 
Sbjct: 51  VLVIVGMIVGLLSGMFGIGGGTVIVPAL--------VWLGLSQRHAAATSMLAIVPTSIS 102

Query: 85  SFMEHRRHGTINMKILKDWI 104
             + +  +G +      DW+
Sbjct: 103 GVISYAHNGNV------DWV 116


>gi|300717706|ref|YP_003742509.1| permease [Erwinia billingiae Eb661]
 gi|299063542|emb|CAX60662.1| Putative permease [Erwinia billingiae Eb661]
          Length = 267

 Score = 36.2 bits (82), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 57/258 (22%), Positives = 108/258 (41%), Gaps = 33/258 (12%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++ L+   + L+G +  + G GGGL+ VP L      +G+  +  +      S+G     
Sbjct: 10  FVGLLFFVAMLAGFIDSIAG-GGGLLTVPALMS----VGLSPAQAIATNKLQSVG----G 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + +   R G +N++  +  I +  +  V  +++I H+    L +   I  + +G+  
Sbjct: 61  SFSASLYFVRRGAVNLREQRLNIGMTFLGAVTGAILIQHLQAELLRQVLPILLIAIGLYF 120

Query: 142 L------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYK 194
           L      + DR   +R+        + G   GF  G  G G G F  L  +   G ++ K
Sbjct: 121 LLLPKIGEEDR---QRRLHGLPFALVAGGCVGFYDGFFGPGAGSFYALAFVTLCGYNLAK 177

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILPISI 245
           +TA +  ++    F  LL  ++ G  +     W  G V          +GA +++     
Sbjct: 178 STAHAKVLNFTSNFGGLLFFMFGGKVV-----WGTGLVMLVGAICGARLGARMVLSRGQT 232

Query: 246 LITPLATKLSYMIGKKYL 263
           LI P+   +S ++  K L
Sbjct: 233 LIRPMVVIVSAVMSAKLL 250


>gi|107102990|ref|ZP_01366908.1| hypothetical protein PaerPA_01004059 [Pseudomonas aeruginosa PACS2]
          Length = 250

 Score = 36.2 bits (82), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 4/141 (2%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMK-ILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           A+G SLG +A ++++  +   R G +  + +L   +  LP +  V   +   V +  L  
Sbjct: 44  AIGVSLGAVALSALIGAIPRARQGQVAWRPVLVLALAGLP-SNAVGQWLGRFVPEGVLIV 102

Query: 129 AFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGG-IFTNLLML 186
           AF +  L     M +   +  E       +  +  G+  G LSG +GVGGG +    L+ 
Sbjct: 103 AFCLLVLWSAWRMWRGAGMKHEASDQARSLPLLGIGLAVGLLSGLMGVGGGFLVVPGLLW 162

Query: 187 FYGASIYKATATSAGVSALIA 207
           F   S+  ATATS  V AL++
Sbjct: 163 FTPLSMMAATATSMAVIALVS 183


>gi|304558789|gb|ADM41453.1| hypothetical protein ETAF_1341 [Edwardsiella tarda FL6-60]
          Length = 249

 Score = 36.2 bits (82), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 103/251 (41%), Gaps = 29/251 (11%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH-RRHGT 94
           LS LFG+GGG+V+VPVL   F          + +   TSL V+  T+ ++ +   R+   
Sbjct: 2   LSALFGLGGGIVLVPVLHVLF------PHCEVQLLAATSLSVVMLTAFINVLAFWRQQAR 55

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFL------NKAFAIFCLLMGILMLKRDRLY 148
            + ++L  W         V++ M   V  SFL         FA   LLM +  L+R R  
Sbjct: 56  PDTRLLIWWAL------GVSAGMQLGVHISFLLPGKAILLIFAAILLLMALRNLRRPRQV 109

Query: 149 CERKF-PDNYVKYIWGM--VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV--- 202
                 P        G+    G ++G  G+GGG     L+    A   +  A        
Sbjct: 110 AATAMSPRCTRNRGLGLCFAGGTVAGITGLGGGSVLAPLLSLLPAIPRRQVAVYCNWLLL 169

Query: 203 --SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
             SA+     LL    +G  L G   W  G+VN+  VL +   ++L  PLA +L   + +
Sbjct: 170 LGSAVTVTTYLLRTPPTGAVLPG--DWQFGYVNLSVVLPVFSCALLTQPLAMRLRRQMSE 227

Query: 261 KYLTIGFSMIM 271
                 FS ++
Sbjct: 228 ARQRQAFSAVL 238


>gi|227522939|ref|ZP_03952988.1| possible permease [Lactobacillus hilgardii ATCC 8290]
 gi|227089968|gb|EEI25280.1| possible permease [Lactobacillus hilgardii ATCC 8290]
          Length = 244

 Score = 36.2 bits (82), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 10/136 (7%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKIL---KDWIFVLPITTVVTSLMISHVDKSFL 126
           A  TSL    P  V+    H R G  NMK     K  I  LP  TV+ SL+   +  +  
Sbjct: 42  AAATSLFTALPALVVGTYSHYRTG--NMKFSYGNKLLITALP-ATVIGSLVSGVIPVTLY 98

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG--IFTNLL 184
             A AI   ++G+  L++            +  Y++G ++G + G  G+ GG  +   LL
Sbjct: 99  TWAIAIILFVLGVQTLRKSFKGKPSSNLKPWTVYLFGALSGLMVGIAGLSGGGPVMAGLL 158

Query: 185 MLFYGASIYKATATSA 200
           +L  G ++ +A ATS+
Sbjct: 159 LL--GLNMPQAAATSS 172


>gi|110637730|ref|YP_677937.1| hypothetical protein CHU_1325 [Cytophaga hutchinsonii ATCC 33406]
 gi|110280411|gb|ABG58597.1| conserved hypothetical protein (possible transporter) [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 246

 Score = 36.2 bits (82), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 6/84 (7%)

Query: 125 FLNKAFA-IFCLLMGILMLKRDRLYCERKFPDN--YVKYIWGMVTGFLSGALGVGGGIFT 181
           F  K FA +F L+  + ++ R++   + +  +   Y   I G V G  SG +GVGGGIF 
Sbjct: 96  FWFKWFAGVFLLVSAVALIIRNKQIEQNEIKEVNLYTALIVGAVIGLFSGLIGVGGGIFL 155

Query: 182 NLLMLFYGASIYKATATSAGVSAL 205
           + L++  G +  K T   +GV+AL
Sbjct: 156 SPLIIVMGWTSLKKT---SGVAAL 176


>gi|145641910|ref|ZP_01797484.1| thymidylate synthase [Haemophilus influenzae R3021]
 gi|145273389|gb|EDK13261.1| thymidylate synthase [Haemophilus influenzae 22.4-21]
          Length = 112

 Score = 36.2 bits (82), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 3/108 (2%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L     ++ + +S+ M  A+GTS   I  T + S   H + G I  + ++    V+ +
Sbjct: 2   PTLVYLLPIVDVPESLLMSTALGTSFATIVITGIGSAQRHHKLGNIVWQAVRILAPVIML 61

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMG---ILMLKRDRLYCERKFP 154
           +  +  L I  +D+    K FA   + +    +L +K+D++  +   P
Sbjct: 62  SVFICGLFIGRLDREISAKIFACLVVYLATKMVLSIKKDQVTTKPLTP 109


>gi|227509879|ref|ZP_03939928.1| possible permease [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227190803|gb|EEI70870.1| possible permease [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 244

 Score = 36.2 bits (82), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 10/136 (7%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKIL---KDWIFVLPITTVVTSLMISHVDKSFL 126
           A  TSL    P  V+    H R G  NMK     K  I  LP  TV+ SL+   +  +  
Sbjct: 42  AAATSLFTALPALVVGTYSHYRTG--NMKFSYGNKLLITALP-ATVIGSLVSGVIPVTLY 98

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG--IFTNLL 184
             A AI   ++G+  L++            +  Y++G ++G + G  G+ GG  +   LL
Sbjct: 99  TWAIAIILFVLGVQTLRKSFKGKPSSNLKPWTVYLFGALSGLMVGIAGLSGGGPVMAGLL 158

Query: 185 MLFYGASIYKATATSA 200
           +L  G ++ +A ATS+
Sbjct: 159 LL--GLNMPQAAATSS 172


>gi|163738959|ref|ZP_02146372.1| membrane protein [Phaeobacter gallaeciensis BS107]
 gi|161387764|gb|EDQ12120.1| membrane protein [Phaeobacter gallaeciensis BS107]
          Length = 307

 Score = 36.2 bits (82), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG +M P+L      +GI  +    VA+ T    I  +S    + H R  
Sbjct: 25 GILSGMFGVGGGFLMTPLLF----FIGIPPA----VAVATEANQIVASSFSGVLAHFRRR 76

Query: 94 TINMKI 99
          T+++K+
Sbjct: 77 TVDIKM 82


>gi|153953330|ref|YP_001394095.1| hypothetical protein CKL_0694 [Clostridium kluyveri DSM 555]
 gi|146346211|gb|EDK32747.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
          Length = 278

 Score = 36.2 bits (82), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 39/224 (17%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  I + S ++G +  + G+GGG V+ P L+  F   GID    +  A+G SL  +  TS
Sbjct: 5   ILQIFIISIVAGIVGSILGLGGGTVITPALTILF---GID----IKYAIGASLISVIATS 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + + R    N++I         +  +  + +   ++  +L   F I  L     M 
Sbjct: 58  SGSAVAYIRDKLTNIRIGMFLEIATTLGAITGAFLGGIINPYYLYFLFGILLLYSAFAMF 117

Query: 143 KRDRLYCER-------------------KFPDNYVKY-IWGMVTGF--------LSGALG 174
           K+ R+                       KF +  + Y + G+ +GF        +SG LG
Sbjct: 118 KKGRMESTEIIETHPLAEKLKLNGQYHDKFLNEDISYKVSGVPSGFGVMYGAGIISGLLG 177

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSA---GVSALIAFPALLVR 214
           +G G F  + M LF    +  ++ATS    GV+A  +    L+R
Sbjct: 178 IGSGSFKVMAMDLFMKLPLKVSSATSNFMMGVTATASAGIYLLR 221


>gi|159184343|ref|NP_353526.2| hypothetical protein Atu0498 [Agrobacterium tumefaciens str. C58]
 gi|159139659|gb|AAK86311.2| conserved hypothetical protein [Agrobacterium tumefaciens str.
          C58]
          Length = 308

 Score = 36.2 bits (82), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG ++ P+L        I  +I   VA+ T    +  +SV   + H R G
Sbjct: 25 GFLSGMFGVGGGFLITPLL--------IFYNIPPVVAVATGANQVVASSVSGSITHFRRG 76

Query: 94 TINMKI 99
          T+++K+
Sbjct: 77 TLDIKL 82


>gi|163741796|ref|ZP_02149186.1| membrane protein [Phaeobacter gallaeciensis 2.10]
 gi|161384969|gb|EDQ09348.1| membrane protein [Phaeobacter gallaeciensis 2.10]
          Length = 307

 Score = 36.2 bits (82), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG +M P+L      +GI  +    VA+ T    I  +S    + H R  
Sbjct: 25 GILSGMFGVGGGFLMTPLLF----FIGIPPA----VAVATEANQIVASSFSGVLAHFRRR 76

Query: 94 TINMKI 99
          T+++K+
Sbjct: 77 TVDIKM 82


>gi|222148591|ref|YP_002549548.1| permease [Agrobacterium vitis S4]
 gi|221735577|gb|ACM36540.1| permease [Agrobacterium vitis S4]
          Length = 256

 Score = 36.2 bits (82), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 16/137 (11%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           + F+ G L G+ GVGG  +M P++     L G+  +     A+GT L   A T +     
Sbjct: 4   SGFVVGCLVGITGVGGASLMTPLM---VLLFGVHPA----TAVGTDLLYAAVTKMAGAAV 56

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGILML 142
           H RHG I  +++          T +T  ++S VD+        L  +  I  ++  +++L
Sbjct: 57  HHRHGHIRWRLVGLLALGSVPATGLTLWLMSGVDRKSAHSVDLLTTSLGIMLMMTAMILL 116

Query: 143 KRDRLYCERKFPDNYVK 159
            RD L    ++  N++K
Sbjct: 117 FRDLLV---RYEMNWLK 130


>gi|198284012|ref|YP_002220333.1| hypothetical protein Lferr_1905 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|198248533|gb|ACH84126.1| protein of unknown function DUF81 [Acidithiobacillus ferrooxidans
           ATCC 53993]
          Length = 305

 Score = 36.2 bits (82), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 97/245 (39%), Gaps = 61/245 (24%)

Query: 12  VFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
           +FL    +   I LII    + G LSGL GVGGG ++ P+L        I   +   VA+
Sbjct: 3   LFLPVAHMAVNIWLIIGFGLIVGFLSGLTGVGGGFLITPLL--------IFVGVPPLVAV 54

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF------ 125
           GT    I   S +    H R G ++M++     F+L   + +  L+  HV +        
Sbjct: 55  GTGAAQIVGASAVGSYAHWRMGNVDMRM----AFILLAGSWMGGLLGVHVARILDASGYF 110

Query: 126 -LNKAFAIFCLL--MGILMLKR-------------------------DRLYCERKFPDNY 157
            L   F    LL  +GI ML                           DRL    +FP + 
Sbjct: 111 GLVVTFLYVGLLGFIGISMLVESTLAMRWGHHPGKNKKKARAGIPWLDRLPWRMEFPVSG 170

Query: 158 VKY------IWGMVTGFLSGALGVGGGIFTNLLMLFY---------GASIYKATATSAGV 202
           ++       + G V G ++  +GVGGG     +ML+          G S+++   TSA V
Sbjct: 171 LRLSILAPVLLGFVVGIMAALMGVGGGFVMVPIMLYLLKMPTRVVVGTSLFQLLFTSAEV 230

Query: 203 SALIA 207
             L A
Sbjct: 231 GILQA 235


>gi|15920362|ref|NP_376031.1| hypothetical protein ST0183 [Sulfolobus tokodaii str. 7]
 gi|15621144|dbj|BAB65140.1| 262aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 262

 Score = 36.2 bits (82), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 23/177 (12%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G L+G+ G  G L++VP LS  +  +   DSI      G+SL V   T++     + ++G
Sbjct: 23  GILTGITGSSGVLIVVPALS--YLGLSYYDSI------GSSLLVDVITTLSVIFVYFKNG 74

Query: 94  TINMKILKDWIFVLPITTVVTSLMISH----VDKSFLNKAFAIFCLLMGILMLKRDR--- 146
            ++ ++      +L +  VV + + S     V +  L  +F IF   M  +  KR R   
Sbjct: 75  NVDYRVS----LLLGLGAVVGAQLGSRIAFAVPEKGLEASFTIFTSYMAYMSFKRSRNPK 130

Query: 147 ---LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI-FTNLLMLFYGASIYKATATS 199
                 E     + +     M+ G ++G LG  GGI F  ++ML +   I +   T+
Sbjct: 131 LNIKRIEIGKTKSLIAIFLAMIIGIVTGTLGASGGIMFIAVMMLLFSIDIKRMIGTA 187


>gi|308173216|ref|YP_003919921.1| integral inner membrane protein [Bacillus amyloliquefaciens DSM 7]
 gi|307606080|emb|CBI42451.1| putative integral inner membrane protein [Bacillus
           amyloliquefaciens DSM 7]
 gi|328911279|gb|AEB62875.1| putative integral inner membrane protein [Bacillus
           amyloliquefaciens LL3]
          Length = 254

 Score = 36.2 bits (82), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 25/178 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I+   F+ GTL GL GVGG  ++ P+L     ++GI+ SI    A+GT L   + T +  
Sbjct: 5   IVFMGFIVGTLVGLTGVGGAALLTPLLI----VLGINPSI----AVGTDLLYNSITKLFG 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG-ILMLKR 144
            + H +  T++ K++  ++ +  I +   ++ + H+  +F      I    +G +L L  
Sbjct: 57  VVSHWKQRTVHFKLV-GYLALGSIPSASAAIGVLHLFPAFHQHQEQIIKHALGYVLTLVA 115

Query: 145 ----DRLYCERKFPDNYVKY-----------IWGMVTGFLSGALGVGGGIFTNLLMLF 187
                RL+ ++K   N  +            + G++ GF+ G   +G G    + ML+
Sbjct: 116 ISIIARLFFDKKLRPNRWQQKTLEEKRGLMILIGVIFGFIVGLTSIGSGSLFAIAMLY 173


>gi|288555852|ref|YP_003427787.1| putative permease with tauE sulfite export domain [Bacillus
           pseudofirmus OF4]
 gi|288547012|gb|ADC50895.1| putative permease with tauE sulfite export domain [Bacillus
           pseudofirmus OF4]
          Length = 289

 Score = 36.2 bits (82), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 21/144 (14%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI-------TTVVTSLMISHVDK 123
           +GTSL +   TS+   + H R   IN      W +V+         T +   LMI     
Sbjct: 43  IGTSLMLSLGTSISGAISHFRLKNIN------WYYVIIFNCTGIIGTQIAHPLMIRLDSM 96

Query: 124 SFLNKAFAIFCLLMG-------ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
            F     ++F + +        +   K++    ++K P   V  + G+  GF+S ALGV 
Sbjct: 97  GFAETVISVFYIALLSYFAFSLLFPAKKEIQSTKKKLPPAIVAGLIGLGAGFISSALGVS 156

Query: 177 GGIF-TNLLMLFYGASIYKATATS 199
           GG F   LL+   G    +A  TS
Sbjct: 157 GGFFIVPLLISLLGFKASQAVGTS 180


>gi|195952382|ref|YP_002120672.1| protein of unknown function DUF81 [Hydrogenobaculum sp. Y04AAS1]
 gi|195931994|gb|ACG56694.1| protein of unknown function DUF81 [Hydrogenobaculum sp. Y04AAS1]
          Length = 267

 Score = 36.2 bits (82), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 13/83 (15%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGID--------DSICMHVAMGTSLGVIAPTSVMS 85
           G +  L G GG ++ VP+L      +G+D        D+I  H+A+G++   +   + ++
Sbjct: 20  GLILSLIGGGGSILAVPLL---LYFVGLDNGNLSKEQDNIVKHLAIGSTALAVGINAFIN 76

Query: 86  FMEHRRHGTINMKILKDWIFVLP 108
            M H +HG +++K  + +IF +P
Sbjct: 77  SMFHFKHGNVSIK--EGFIFAIP 97


>gi|193215172|ref|YP_001996371.1| hypothetical protein Ctha_1465 [Chloroherpeton thalassium ATCC
           35110]
 gi|193088649|gb|ACF13924.1| conserved hypothetical protein [Chloroherpeton thalassium ATCC
           35110]
          Length = 124

 Score = 35.8 bits (81), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 12/104 (11%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS-LGVIAPTSVMSFMEHRR 91
           +G  SGLFG+GGGLV+VP L        I   +  H A GTS + ++ P  ++  +E+ R
Sbjct: 15  AGIFSGLFGIGGGLVIVPAL--------IWVGLSQHEASGTSLVALLLPVGLLGVIEYYR 66

Query: 92  HGTINMKILKDWIFV---LPITTVVTSLMISHVDKSFLNKAFAI 132
            G ++ + +K  + +   L     + S +   +  S L K+FA+
Sbjct: 67  AGALSTEHIKYGLLIALGLFFGAFLGSKISVSISDSLLRKSFAL 110


>gi|104780986|ref|YP_607484.1| hypothetical protein PSEEN1839 [Pseudomonas entomophila L48]
 gi|95109973|emb|CAK14678.1| conserved hypothetical protein; putative membrane protein
           [Pseudomonas entomophila L48]
          Length = 261

 Score = 35.8 bits (81), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 18/139 (12%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +A  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T      
Sbjct: 10  IAGLVVGFIVGMTGVGGGSLMTPIL----LWFGINPA----TAVGTDLLYAAITKASGVW 61

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLM---ISHVDKSFLN----KAFAIFCLLMGIL 140
            H R+  I+ KI   W+ +  +     +L      H D + LN    +  A+  +L  + 
Sbjct: 62  VHGRNKNIDWKI-TGWLSLGSVPAAALTLWFLSTLHTDTTALNAIIKQGLAVVLILTALA 120

Query: 141 MLKRDRL--YCERKFPDNY 157
           +L + RL  +  +   D+Y
Sbjct: 121 ILFKSRLQAFASKHTGDHY 139


>gi|49478322|ref|YP_037749.1| permease [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|49329878|gb|AAT60524.1| conserved hypothetical protein, possible permease [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 251

 Score = 35.8 bits (81), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHG----TINMKILKDWIFVLPITTVVTSLMISH 120
           I +HVA+ TSL  +A T++   + H R G    TI   +     F   I + + SL+  +
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSLIPPY 94

Query: 121 VDKSFLNKAFAIFCLLMGILMLK----RDRLYCERK--FPDNYVKYI-WGMVTGFLSGAL 173
           +   F      +  + M I ++K     + L  E K    +N +K I  G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGMMAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I +    S G + L+  P     I  G G        LG+ 
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----IAIGGG--------LGYS 197

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           + G +  IL + +LI    T L   IG K+      + + FSMIM
Sbjct: 198 SEGYLDHILLLQVLI---GTMLGAYIGAKFTNYAPRMLLKFSMIM 239


>gi|184155467|ref|YP_001843807.1| putative transport protein [Lactobacillus fermentum IFO 3956]
 gi|227515056|ref|ZP_03945105.1| domain of hypothetical function DUF81 [Lactobacillus fermentum ATCC
           14931]
 gi|183226811|dbj|BAG27327.1| putative transport protein [Lactobacillus fermentum IFO 3956]
 gi|227086578|gb|EEI21890.1| domain of hypothetical function DUF81 [Lactobacillus fermentum ATCC
           14931]
          Length = 246

 Score = 35.8 bits (81), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 6/103 (5%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWI-FVLPITTVVTSLMISHVDKSFLNK 128
           A+ TSL    P      +   RHG +N+K+ + ++ F LP T +V SL+  ++ +     
Sbjct: 44  AVDTSLLTAIPALCFGALSFYRHGNVNVKLARQFLYFALP-TVIVASLLARYIPEKIYAP 102

Query: 129 AFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSG 171
              +  +++G+ M  R      R+  D +V  +       LSG
Sbjct: 103 LIGLVLVVLGVQMYFRK----VRQTEDIHVDRVKAAYYAILSG 141


>gi|328553864|gb|AEB24356.1| integral inner membrane protein [Bacillus amyloliquefaciens TA208]
          Length = 254

 Score = 35.8 bits (81), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 25/178 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I+   F+ GTL GL GVGG  ++ P+L     ++GI+ SI    A+GT L   + T +  
Sbjct: 5   IVFMGFIVGTLVGLTGVGGAALLTPLLI----VLGINPSI----AVGTDLLYNSITKLFG 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG-----IL 140
            + H +  T++ K++  ++ +  I +   ++ + H+  +F      I    +G     ++
Sbjct: 57  VVSHWKQRTVHFKLV-GYLALGSIPSASAAIGVLHLFPAFHQHQEQIIKHALGYVLTLVV 115

Query: 141 MLKRDRLYCERKFPDNYVKY-----------IWGMVTGFLSGALGVGGGIFTNLLMLF 187
           +    RL+ ++K   N  +            + G++ GF+ G   +G G    + ML+
Sbjct: 116 ISIIARLFFDKKLRPNRWQQKTLEEKRGLMILIGVIFGFIVGLTSIGSGSLFAIAMLY 173


>gi|325291889|ref|YP_004277753.1| hypothetical protein AGROH133_03791 [Agrobacterium sp. H13-3]
 gi|325059742|gb|ADY63433.1| hypothetical protein AGROH133_03791 [Agrobacterium sp. H13-3]
          Length = 308

 Score = 35.8 bits (81), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG ++ P+L        I  +I   VA+ T    +  +SV   + H R G
Sbjct: 25 GFLSGMFGVGGGFLITPLL--------IFYNIPPVVAVATGANQVVASSVSGSITHFRRG 76

Query: 94 TINMKI 99
          T+++K+
Sbjct: 77 TLDVKL 82


>gi|308270980|emb|CBX27590.1| hypothetical protein N47_H24120 [uncultured Desulfobacterium sp.]
          Length = 275

 Score = 35.8 bits (81), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 95/226 (42%), Gaps = 39/226 (17%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAF--QLMGIDDSICMHVAMGTSLGV 77
           +++ICL +      G    L G GGG V++PVL   +  Q   +  SI + +    +L  
Sbjct: 7   LEFICLGVAV----GCYGTLIGAGGGFVLMPVLLLLYPNQNANLLTSISLAIVFFNALSG 62

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
               S+M  +++R     ++  +           V+ +L  ++V +   +  FAI  L+ 
Sbjct: 63  TEAYSLMKRIDYRSGLMFSLATIPG--------AVLGALNTAYVPRRLFDFIFAILLLVG 114

Query: 138 GILMLKRDRLYCERKFP-------------DNYVK-----YIW--GM----VTGFLSGAL 173
            + +  R R     +               D++ K     + W  GM    + G++S  L
Sbjct: 115 AVFLALRPREVENNRISISKGRNRSMRILVDSHGKKYEYNFNWPLGMMISVIVGYVSSFL 174

Query: 174 GVGGGIF-TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           G+GGGI     L       I+ ATATS  V A++A    +V I +G
Sbjct: 175 GIGGGIIHVPALCYLLNFPIHIATATSHFVLAIMALTGTIVHIITG 220


>gi|260431503|ref|ZP_05785474.1| putative membrane protein [Silicibacter lacuscaerulensis
          ITI-1157]
 gi|260415331|gb|EEX08590.1| putative membrane protein [Silicibacter lacuscaerulensis
          ITI-1157]
          Length = 306

 Score = 35.8 bits (81), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG +M P+L      +GI  +    VA+ T    I  +S    + H R  
Sbjct: 25 GILSGMFGVGGGFLMTPLLF----FIGIPPA----VAVATEANQIVASSFSGVLAHFRRK 76

Query: 94 TINMKI 99
          T+++K+
Sbjct: 77 TVDLKM 82


>gi|254475159|ref|ZP_05088545.1| membrane protein [Ruegeria sp. R11]
 gi|214029402|gb|EEB70237.1| membrane protein [Ruegeria sp. R11]
          Length = 307

 Score = 35.8 bits (81), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG +M P+L      +GI  +    VA+ T    I  +S    + H R  
Sbjct: 25 GILSGMFGVGGGFLMTPLLF----FIGIPPA----VAVATEANQIVASSFSGVLAHFRRR 76

Query: 94 TINMKI 99
          T+++K+
Sbjct: 77 TVDIKM 82


>gi|228934951|ref|ZP_04097782.1| hypothetical protein bthur0009_34050 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228824851|gb|EEM70652.1| hypothetical protein bthur0009_34050 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 267

 Score = 35.8 bits (81), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHG----TINMKILKDWIFVLPITTVVTSLMISH 120
           I +HVA+ TSL  +A T++   + H R G    TI   +     F   I + ++SL+  +
Sbjct: 51  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKISSLIPPY 110

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCER--KFPD----NYVKYI-WGMVTGFLSGAL 173
           +   F      +  + M I ++K       R  K  D    N +K I  G+VTG ++G+ 
Sbjct: 111 LLHWFTAGMLFLSAIFMCIKLIKFQNEEEVRLVKIKDISKENIMKCICLGLVTGMMAGSF 170

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I +    S G + L+  P     I  G G        LG+ 
Sbjct: 171 GIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----IAIGGG--------LGYS 213

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           + G +  IL + +LI    T L   IG K+      + + FSMIM
Sbjct: 214 SEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRMLLKFSMIM 255


>gi|167032883|ref|YP_001668114.1| hypothetical protein PputGB1_1875 [Pseudomonas putida GB-1]
 gi|166859371|gb|ABY97778.1| protein of unknown function DUF81 [Pseudomonas putida GB-1]
          Length = 261

 Score = 35.8 bits (81), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 24/142 (16%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +A  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T      
Sbjct: 10  IAGLVVGFIVGMTGVGGGSLMTPIL----LWFGINPA----TAVGTDLLYAAITKASGVW 61

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTS------LMISHVDKSFLN----KAFAIFCLLM 137
            H R   I+ KI      +L + +V  +      L   H D S LN    +  A+  +L 
Sbjct: 62  VHARQKNIDWKITG----LLSLGSVPAAALTLWFLSTLHTDTSALNAIIKQGLAVVLILT 117

Query: 138 GILMLKRDRL--YCERKFPDNY 157
            + +L + RL  +  R   D+Y
Sbjct: 118 ALAILFKSRLQAFASRHAGDHY 139


>gi|296104013|ref|YP_003614159.1| hypothetical protein ECL_03676 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295058472|gb|ADF63210.1| hypothetical protein ECL_03676 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 270

 Score = 35.8 bits (81), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 101/247 (40%), Gaps = 27/247 (10%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           + L+G +  L G GGGL+ VP L  A         +    A+ T+       S+ + +  
Sbjct: 22  AMLAGFIDALAG-GGGLLTVPALLAA--------GMSPAQALATNKLQACGGSLSASLYF 72

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG---ILMLKRDR 146
            R   +N+   K  I +  I +   +L++ HV    L +   +  + +G   +LM K   
Sbjct: 73  IRRKVVNLADQKLNILMTFIGSTSGALLVQHVQSDILRQILPVLVICIGLYFLLMPKLGE 132

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSAL 205
              +R+        I G   GF  G  G G G F  L  +   G ++ K+TA +  ++A 
Sbjct: 133 EDRQRRLHGLPFALIAGGCVGFYDGFFGPGAGSFYALAFVTLAGFNLAKSTAHAKVLNAT 192

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILPISILITPLATKLSY 256
                LL+ I  G  +     W+ GFV           G+ L++     LI P+   +S 
Sbjct: 193 SNVGGLLLFIIGGKVI-----WATGFVMMAGQFLGARAGSRLVLSKGQKLIRPMIVIVSA 247

Query: 257 MIGKKYL 263
           ++  K L
Sbjct: 248 VMSAKLL 254


>gi|293378153|ref|ZP_06624322.1| putative membrane protein [Enterococcus faecium PC4.1]
 gi|292643017|gb|EFF61158.1| putative membrane protein [Enterococcus faecium PC4.1]
          Length = 278

 Score = 35.8 bits (81), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 21/179 (11%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+ T+  + G+GGG+++ P+L          D I  H   G S         MS +   R
Sbjct: 12  LANTVGAISGMGGGVLIKPIL----------DLIGAHSVAGISFYSTVAVFTMSIVSTVR 61

Query: 92  H----GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN-KAFAIFCLLMGILMLKRDR 146
                 ++N +I+        +  VV +++     + F N K   +  + + +L L    
Sbjct: 62  QVSSGKSLNWQIVGWVSSGAVVGGVVGNIVFEVFLQLFENEKHVQLIQIFLTVLTLVFAF 121

Query: 147 LYCERKFPD-NYVKYIW----GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            Y +   P  +   + W    G+V GFL+  LG+GGG +  +LLML +   I +AT  S
Sbjct: 122 FYTKHHQPKFHLTSWTWYLICGVVLGFLASFLGIGGGPVNVSLLMLMFALPIKEATLYS 180


>gi|260662012|ref|ZP_05862908.1| permease [Lactobacillus fermentum 28-3-CHN]
 gi|260553395|gb|EEX26287.1| permease [Lactobacillus fermentum 28-3-CHN]
          Length = 246

 Score = 35.8 bits (81), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 6/103 (5%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWI-FVLPITTVVTSLMISHVDKSFLNK 128
           A+ TSL    P      +   RHG +N+K+ + ++ F LP T +V SL+  ++ +     
Sbjct: 44  AVDTSLLTAIPALCFGALSFYRHGNVNVKLARQFLYFALP-TVIVASLLARYIPEKIYAP 102

Query: 129 AFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSG 171
              +  +++G+ M  R      R+  D +V  +       LSG
Sbjct: 103 LIGLVLVVLGVQMYFRK----VRQTEDIHVDRVKAAYYAILSG 141


>gi|118478909|ref|YP_896060.1| permease [Bacillus thuringiensis str. Al Hakam]
 gi|118418134|gb|ABK86553.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 272

 Score = 35.8 bits (81), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHG----TINMKILKDWIFVLPITTVVTSLMISH 120
           I +HVA  TSL  +A T++   + H R G    TI   +     F   I + + S +  +
Sbjct: 56  IPIHVAFATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSFIPPY 115

Query: 121 VDKSFLNKAFAIFCLLMGILMLK--RDRLYCERKFPD----NYVKYIW-GMVTGFLSGAL 173
           +   F      +  + M I ++K   +   C  K  D    N +K I  G+VTG ++G+ 
Sbjct: 116 LLHWFTAGMLFLSAIFMCIKLIKFQNEEEVCLVKIKDISKENIMKCICLGLVTGMMAGSF 175

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I +    S G + L+  P     I  G G        LG+ 
Sbjct: 176 GIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----IAIGGG--------LGYS 218

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           + G +  IL + +LI    T L   IG K+      + + FSMIM
Sbjct: 219 SEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRMLLKFSMIM 260


>gi|301065336|ref|YP_003787359.1| putative permease [Lactobacillus casei str. Zhang]
 gi|300437743|gb|ADK17509.1| Predicted permease [Lactobacillus casei str. Zhang]
          Length = 280

 Score = 35.8 bits (81), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 30/139 (21%), Positives = 66/139 (47%), Gaps = 10/139 (7%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + +++V   L G L  + G+GGG+++ P+L+    LMG+     +  A+G S+  +  
Sbjct: 2   EQMIMLMVTGLLGGILGAVLGIGGGMIITPILT---MLMGLP----IQYAIGASIVSVIA 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS  + + + +   +N+++         +  V+ +++   VD   L   F    +     
Sbjct: 55  TSSGATIGYLKDEMLNLRVAMFLEIATTVGAVIGAVVTGLVDGKVLYVLFGALLIFSAFN 114

Query: 141 MLKRDRLY--CERKF-PDN 156
           M+++ R+    ER+  PD 
Sbjct: 115 MIRKMRMKEPEERQSKPDE 133


>gi|217969230|ref|YP_002354464.1| hypothetical protein Tmz1t_0799 [Thauera sp. MZ1T]
 gi|217506557|gb|ACK53568.1| protein of unknown function DUF81 [Thauera sp. MZ1T]
          Length = 260

 Score = 35.8 bits (81), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 7/74 (9%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +A F  G + GL GVGGG +M P+L   F   GI  S    VA+GT L   A T     +
Sbjct: 7   IAGFAVGAIVGLTGVGGGSLMTPLLVLMF---GIHPS----VAVGTDLLYAAITKAGGTL 59

Query: 88  EHRRHGTINMKILK 101
            H   GT++ KI +
Sbjct: 60  AHGLKGTVDWKITR 73


>gi|257892915|ref|ZP_05672568.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|257897897|ref|ZP_05677550.1| conserved hypothetical protein [Enterococcus faecium Com15]
 gi|257829294|gb|EEV55901.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|257835809|gb|EEV60883.1| conserved hypothetical protein [Enterococcus faecium Com15]
          Length = 275

 Score = 35.8 bits (81), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 21/179 (11%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+ T+  + G+GGG+++ P+L          D I  H   G S         MS +   R
Sbjct: 9   LANTVGAISGMGGGVLIKPIL----------DLIGAHSVAGISFYSTVAVFTMSIVSTVR 58

Query: 92  H----GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN-KAFAIFCLLMGILMLKRDR 146
                 ++N +I+        +  VV +++     + F N K   +  + + +L L    
Sbjct: 59  QVSSGKSLNWQIVGWVSSGAVVGGVVGNIVFEVFLQLFENEKHVQLIQIFLTVLTLVFAF 118

Query: 147 LYCERKFPD-NYVKYIW----GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            Y +   P  +   + W    G+V GFL+  LG+GGG +  +LLML +   I +AT  S
Sbjct: 119 FYTKHHQPKFHLTSWTWYLICGVVLGFLASFLGIGGGPVNVSLLMLMFALPIKEATLYS 177


>gi|227552121|ref|ZP_03982170.1| protein of hypothetical function DUF81 [Enterococcus faecium
           TX1330]
 gi|257895283|ref|ZP_05674936.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|227178761|gb|EEI59733.1| protein of hypothetical function DUF81 [Enterococcus faecium
           TX1330]
 gi|257831848|gb|EEV58269.1| conserved hypothetical protein [Enterococcus faecium Com12]
          Length = 278

 Score = 35.8 bits (81), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 21/179 (11%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+ T+  + G+GGG+++ P+L          D I  H   G S         MS +   R
Sbjct: 12  LANTVGAISGMGGGVLIKPIL----------DLIGAHSVAGISFYSTVAVFTMSIVSTVR 61

Query: 92  H----GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN-KAFAIFCLLMGILMLKRDR 146
                 ++N +I+        +  VV +++     + F N K   +  + + +L L    
Sbjct: 62  QVSSGKSLNWQIVGWVSSGAVVGGVVGNIVFEVFLQLFENEKHVQLIQIFLTVLTLVFAF 121

Query: 147 LYCERKFPD-NYVKYIW----GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
            Y +   P  +   + W    G+V GFL+  LG+GGG +  +LLML +   I +AT  S
Sbjct: 122 FYTKHHQPKFHLTSWTWYLICGVVLGFLASFLGIGGGPVNVSLLMLMFALPIKEATLYS 180


>gi|49477668|ref|YP_036512.1| hypothetical protein BT9727_2185 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49329224|gb|AAT59870.1| conserved hypothetical protein, possible membrane protein [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 257

 Score = 35.8 bits (81), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 25/170 (14%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G L G+ G+GG  ++ P L      +GI  SI    A+GT L   + T +    +H +  
Sbjct: 13  GVLVGMTGIGGAALLTPFLLT----VGIPPSI----AVGTDLLYNSITKMFGITQHWKQK 64

Query: 94  TINMKILKDWIF------VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
           TIN K+++          ++ ITT +  L I H D+  + K    + L++  + +    +
Sbjct: 65  TINFKLVRYLALGSIPSAIIAITT-IHFLPILHQDREEVLKYIIGYVLIVAAISIFIKII 123

Query: 148 YCERKFPDNYVKY----------IWGMVTGFLSGALGVGGGIFTNLLMLF 187
           +  +  P+ + K             G + GF+ G   VG G    ++M++
Sbjct: 124 FYNQSVPNYFQKQSLEQKKNVTIFIGAILGFVVGLTSVGSGSLFAIVMIY 173


>gi|13474679|ref|NP_106248.1| hypothetical protein mll5620 [Mesorhizobium loti MAFF303099]
 gi|14025434|dbj|BAB52034.1| mll5620 [Mesorhizobium loti MAFF303099]
          Length = 307

 Score = 35.8 bits (81), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG ++ P+L        I  +I   +A+ T    +  +SV   + H + G
Sbjct: 25 GFLSGMFGVGGGFLITPLL--------IFYNIPPAIAVATGANQVIASSVSGVLSHMKRG 76

Query: 94 TINMKI 99
          T++ K+
Sbjct: 77 TLDFKL 82


>gi|254467336|ref|ZP_05080747.1| permease [Rhodobacterales bacterium Y4I]
 gi|206688244|gb|EDZ48726.1| permease [Rhodobacterales bacterium Y4I]
          Length = 285

 Score = 35.8 bits (81), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG +M P+L      +GI  +    VA+ T    I  +S    + H R  
Sbjct: 3  GVLSGMFGVGGGFLMTPLLF----FIGIPPA----VAVATEANQIVASSFSGVLAHFRRR 54

Query: 94 TINMKI 99
          T+++K+
Sbjct: 55 TVDIKM 60


>gi|221308401|ref|ZP_03590248.1| hypothetical protein Bsubs1_03198 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312722|ref|ZP_03594527.1| hypothetical protein BsubsN3_03169 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317646|ref|ZP_03598940.1| hypothetical protein BsubsJ_03133 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|1945085|dbj|BAA19693.1| ydhB [Bacillus subtilis]
          Length = 259

 Score = 35.8 bits (81), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 13/145 (8%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI--------LKDWIFVLPITTVVTSL 116
           I +H A+GTSL  +A TS+     H R G I MKI             F   +T+ + + 
Sbjct: 35  IPIHTALGTSLAGMAFTSLSGAYSHYREGNIQMKIGLIVGGFAAVGSFFGAKLTSFIPAD 94

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK-YIWGMVTGFLSGALGV 175
           ++ ++    L   F    L++  L + +++    +     Y +  I G+  G LSG  G+
Sbjct: 95  LLHYLTAGML---FLSAILILIRLFILKEKAQVNQSTLSTYTRAVILGIAAGVLSGTFGI 151

Query: 176 GGGIFTNL-LMLFYGASIYKATATS 199
           G   F  + LM+    SI  +  T+
Sbjct: 152 GSAPFIQIGLMIMLNLSIRHSVGTT 176


>gi|326801252|ref|YP_004319071.1| hypothetical protein Sph21_3867 [Sphingobacterium sp. 21]
 gi|326552016|gb|ADZ80401.1| protein of unknown function DUF81 [Sphingobacterium sp. 21]
          Length = 277

 Score = 35.8 bits (81), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 82/191 (42%), Gaps = 31/191 (16%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           V+ +  +++  +  +G +  L G+GGG+V++P+L+    ++G+D    +H A+G +L  +
Sbjct: 3   VLTFTLILLFGACCAGFIGSLTGLGGGVVIIPLLT---VVLGVD----IHYAIGAALVSV 55

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS  S   + + G  NM++            V  +L+ S    S +   F    +   
Sbjct: 56  IATSSGSAAAYVKEGITNMRLGMFLEIATTAGAVGGALLASIAPTSLIAILFGCTLIFSA 115

Query: 139 ILMLKRDRLYCER---------KFPDNY----------VKYIWG-----MVTGFLSGALG 174
           +  L++   +  +         K P +Y           K + G      + G LSG LG
Sbjct: 116 LNSLRKKEEHNVKSSSSLALALKLPSSYPSTSGIISYETKNVIGGFSMMGLAGMLSGLLG 175

Query: 175 VGGGIFTNLLM 185
           +G G F  + M
Sbjct: 176 IGSGAFKVIAM 186


>gi|254172062|ref|ZP_04878738.1| conserved domain protein, putative [Thermococcus sp. AM4]
 gi|214033958|gb|EEB74784.1| conserved domain protein, putative [Thermococcus sp. AM4]
          Length = 243

 Score = 35.8 bits (81), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 7/111 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           LSG +SGL G+ GG++ VP+       +GI     M  A+GTS   +  T++    EH R
Sbjct: 139 LSGLVSGLLGISGGVLNVPLFH---TFVGIP----MRYAVGTSSFALFFTALAGAFEHYR 191

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            G +++ +       L I   + +L    V    L KAFA   +L+ + ML
Sbjct: 192 LGQVDLHMALLLAPGLIIGGRLGALAAHRVRPEVLRKAFAGVLILVALKML 242


>gi|190890252|ref|YP_001976794.1| permease [Rhizobium etli CIAT 652]
 gi|190695531|gb|ACE89616.1| putative permease protein [Rhizobium etli CIAT 652]
          Length = 307

 Score = 35.8 bits (81), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG ++ P+L        I  +I   VA+ T    +  +S+   + H R G
Sbjct: 25 GFLSGMFGVGGGFLITPLL--------IFYNIPPVVAVATGANQVVASSISGAITHFRRG 76

Query: 94 TINMKI 99
          T+++K+
Sbjct: 77 TLDVKL 82


>gi|163755485|ref|ZP_02162604.1| hypothetical protein KAOT1_04972 [Kordia algicida OT-1]
 gi|161324398|gb|EDP95728.1| hypothetical protein KAOT1_04972 [Kordia algicida OT-1]
          Length = 249

 Score = 35.8 bits (81), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 8/69 (11%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV-IAPTSVMSFMEHRR 91
           +G L G+FG+G G++MVP+L   F+L           A   SL + I P S  +F+++  
Sbjct: 145 TGILGGMFGIGAGVLMVPILIGGFKLKK-------EYARALSLAILIPPVSYGAFIKYNL 197

Query: 92  HGTINMKIL 100
              I+ +++
Sbjct: 198 ENPIDWQLV 206


>gi|119026567|ref|YP_910412.1| hypothetical protein BAD_1549 [Bifidobacterium adolescentis ATCC
           15703]
 gi|118766151|dbj|BAF40330.1| widely conserved hypothetical transmembrane protein with dub81
           [Bifidobacterium adolescentis ATCC 15703]
          Length = 292

 Score = 35.8 bits (81), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 8/80 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D     I ++IV   L G LSG FG+GGG V+VP    A   +G+        A  TS  
Sbjct: 31  DGSARSIIVLIVVGMLVGVLSGTFGIGGGTVIVP----ALVWLGLSQ----RNAAATSTL 82

Query: 77  VIAPTSVMSFMEHRRHGTIN 96
            I PTS+   + +   G ++
Sbjct: 83  AIVPTSISGVVSYATGGHVD 102


>gi|90416698|ref|ZP_01224628.1| hypothetical protein GB2207_03584 [marine gamma proteobacterium
           HTCC2207]
 gi|90331451|gb|EAS46687.1| hypothetical protein GB2207_03584 [marine gamma proteobacterium
           HTCC2207]
          Length = 252

 Score = 35.8 bits (81), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATA 197
           I ML   +   + + P  ++    G + GF +G  G+GGG+F + ++L +G  SI ++TA
Sbjct: 118 IRMLMSHKANQQIQLPALWLVLTVGALLGFSAGLTGIGGGVFLSPILLIFGWCSIRQSTA 177

Query: 198 TSAG 201
            +AG
Sbjct: 178 VAAG 181


>gi|15602461|ref|NP_245533.1| hypothetical protein PM0596 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720866|gb|AAK02680.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 266

 Score = 35.8 bits (81), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 7/85 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I ++IV   L+  +S +FG+GGG++MVP+L   F          + +   TSL ++ 
Sbjct: 3   LQLILILIVCGVLTNFMSAIFGIGGGVLMVPILYTLF------PDFPLQMVAATSLTIVI 56

Query: 80  PTSVMSFME-HRRHGTINMKILKDW 103
            +S+++ +  +++   IN K +  W
Sbjct: 57  GSSLINLIYFYKQKIQINFKAMLLW 81


>gi|257868810|ref|ZP_05648463.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
 gi|257802974|gb|EEV31796.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
          Length = 258

 Score = 35.8 bits (81), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 34/253 (13%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+ T+  + G+GGG+++ P+           D I  H     S         MS +   R
Sbjct: 12  LANTVGAVSGMGGGVLIKPIF----------DFIGAHSVAAISFYSAVAVFTMSLVSTAR 61

Query: 92  HGTINMKILKDWIFVLPITT------VVTSLMISHVDKSFLNKAF-AIFCLLMGILMLKR 144
                 KI  +W  VL ++       V+ ++    +   F N+    +  + + ++ L  
Sbjct: 62  QLASGHKI--NWQIVLWVSGGAILGGVLGNVAFDQLLLFFQNEDHVQMVQIFLTVVTLLF 119

Query: 145 DRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATAT 198
              Y +  +P     +N+     G+V GFL+  LG+GGG I  +LLML +   I +AT  
Sbjct: 120 AFFYTKYDWPGFQLKNNFWYCFCGLVLGFLASLLGIGGGPINVSLLMLMFALPIKEATV- 178

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
               S    F + L +I +  G  G      G  ++  +  ++P +I+   L  K+S ++
Sbjct: 179 ---YSICTIFFSQLAKIVTIAGTTG-----FGLYDLKILWFVIPAAIVGGLLGAKVSTVL 230

Query: 259 GKKYLTIGFSMIM 271
             + +T+ F  ++
Sbjct: 231 SPQKVTLVFQTVI 243


>gi|282163341|ref|YP_003355726.1| hypothetical protein MCP_0671 [Methanocella paludicola SANAE]
 gi|282155655|dbj|BAI60743.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 263

 Score = 35.8 bits (81), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 7/78 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L  +   +SG   G+ G+GG  ++VP L+  F L        +++A+G SL      S
Sbjct: 7   LALFFITGIISGLFGGMLGIGGATILVPALTLIFGL-------PVYLAIGVSLLNNVAVS 59

Query: 83  VMSFMEHRRHGTINMKIL 100
             + M +++ G +N +++
Sbjct: 60  TSATMRYKKRGLLNRRVI 77


>gi|86356207|ref|YP_468099.1| putative permease protein [Rhizobium etli CFN 42]
 gi|86280309|gb|ABC89372.1| putative permease protein [Rhizobium etli CFN 42]
          Length = 307

 Score = 35.8 bits (81), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG ++ P+L        I  +I   VA+ T    +  +S+   + H R G
Sbjct: 25 GFLSGMFGVGGGFLITPLL--------IFYNIPPVVAVATGANQVVASSISGAITHFRRG 76

Query: 94 TINMKI 99
          T+++K+
Sbjct: 77 TLDIKL 82


>gi|127513412|ref|YP_001094609.1| hypothetical protein Shew_2484 [Shewanella loihica PV-4]
 gi|126638707|gb|ABO24350.1| protein of unknown function DUF81 [Shewanella loihica PV-4]
          Length = 257

 Score = 35.8 bits (81), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 17/172 (9%)

Query: 17  DCVVDYICLIIVAS--FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           D ++D     I+A+  F++G +  + G GGGL+ +P L        +   I  H A+GT+
Sbjct: 2   DLLLDPGSWAILAATGFIAGFIDAIAG-GGGLLSIPAL--------LTIGIPPHTALGTN 52

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
               +  S M+   + R      +          I  V+ + ++  +D  +L K   +F 
Sbjct: 53  KLAASFGSSMAAFTYYRKQFFTPRFWYHASIATFIGAVIGTFVVYLIDNQWLEKWLPLFI 112

Query: 135 LLMGI-LMLKRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
           + + +  +LK + + C       K P  + ++  G+  GF  G  G   G F
Sbjct: 113 IAVALYTLLKPNAMGCPTYEPPVKAPSKFKQWRQGIPLGFYDGFAGPATGAF 164


>gi|294792491|ref|ZP_06757638.1| putative membrane protein [Veillonella sp. 6_1_27]
 gi|294456390|gb|EFG24753.1| putative membrane protein [Veillonella sp. 6_1_27]
          Length = 264

 Score = 35.8 bits (81), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 7/60 (11%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           SF  G +S +FG+GGGL+ VP L     LMG       H+A  TS  ++A ++ +  + H
Sbjct: 152 SFFVGFISSIFGIGGGLIHVPAL---IYLMGFPT----HMATATSQSILAVSTTVGVITH 204


>gi|255307001|ref|ZP_05351172.1| hypothetical protein CdifA_10462 [Clostridium difficile ATCC 43255]
          Length = 250

 Score = 35.8 bits (81), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 18/186 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V ++C   +  FL+  +  + G GGGL+ +PVL      M I   + +H+A+GT+    +
Sbjct: 4   VIFLC---IGGFLAAFVDSIAG-GGGLISMPVL------MAI--GVPVHLAIGTNKFAAS 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              + S   + + G IN  +LK  +    I +V+    +  + +  LN       L++ I
Sbjct: 52  AGCISSAYRYAKSGKINNNLLKKLVPFTIIGSVLGVRCVLSISEEILNVLVVAMILIVAI 111

Query: 140 LMLKRDRLYCERKFPDNYVKY-----IWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIY 193
                  L  E  F     K      +  ++ GF  G  G G G F     +  YG    
Sbjct: 112 YTFISKNLGQEDNFEAVNKKNLRLGMLMALIMGFYDGFFGPGTGTFLTFGFIKIYGYDFL 171

Query: 194 KATATS 199
            A+A +
Sbjct: 172 HASANT 177


>gi|294794285|ref|ZP_06759421.1| putative membrane protein [Veillonella sp. 3_1_44]
 gi|294454615|gb|EFG22988.1| putative membrane protein [Veillonella sp. 3_1_44]
          Length = 286

 Score = 35.8 bits (81), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 7/60 (11%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           SF  G +S +FG+GGGL+ VP L     LMG       H+A  TS  ++A ++ +  + H
Sbjct: 174 SFFVGFISSIFGIGGGLIHVPAL---IYLMGFPT----HMATATSQSILAVSTTVGVITH 226


>gi|282849556|ref|ZP_06258940.1| putative membrane protein [Veillonella parvula ATCC 17745]
 gi|282580493|gb|EFB85892.1| putative membrane protein [Veillonella parvula ATCC 17745]
          Length = 264

 Score = 35.8 bits (81), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 7/60 (11%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           SF  G +S +FG+GGGL+ VP L     LMG       H+A  TS  ++A ++ +  + H
Sbjct: 152 SFFVGFISSIFGIGGGLIHVPAL---IYLMGFPT----HMATATSQSILAVSTTVGVITH 204


>gi|555047|gb|AAA73343.1| unnamed protein product [Human T-lymphotropic virus 1]
          Length = 173

 Score = 35.8 bits (81), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 3/41 (7%)

Query: 198 TSAGVSALIAFPALLVRIYSGWGLN---GLPPWSLGFVNIG 235
           T++ VS L   P L  R+ +GWGLN   GLP W+ G +  G
Sbjct: 117 TNSHVSILQERPPLENRVLTGWGLNWDLGLPQWARGALQTG 157


>gi|323253867|gb|EGA37692.1| hypothetical protein SEEM8282_06879 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
          Length = 265

 Score = 35.4 bits (80), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 34/256 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           CL  VA  L+G +  + G GGGL+ +P L  A    G+  +     A+ T+       S+
Sbjct: 13  CLFFVA-VLAGFIDSIAG-GGGLLTIPALMAA----GMSPA----NALATNKLQACGGSL 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML- 142
            S +   R   +N+   K  I +  I ++  +L++ HV    L +   I  + +G+  L 
Sbjct: 63  SSSLYFIRRKVVNLAEQKLNILMTFIGSMSGALLVQHVQADILRQILPILVIFIGLYFLL 122

Query: 143 -----KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
                + DR   +R+        I G   GF  G  G   G F  L  +   G ++ K+T
Sbjct: 123 MPKLGEEDR---QRRLYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGYNLAKST 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILPISILI 247
           A +  ++A      LL+ I     + G   W+ GFV          +G+ L++     LI
Sbjct: 180 AHAKVLNATSNVGGLLLFI-----IGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLI 234

Query: 248 TPLATKLSYMIGKKYL 263
            P+   +S ++  + L
Sbjct: 235 RPMIVIVSAVMSARLL 250


>gi|163761304|ref|ZP_02168379.1| hypothetical protein HPDFL43_21639 [Hoeflea phototrophica DFL-43]
 gi|162281461|gb|EDQ31757.1| hypothetical protein HPDFL43_21639 [Hoeflea phototrophica DFL-43]
          Length = 308

 Score = 35.4 bits (80), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 8/65 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG ++ P+L        I  +I   VA+ T    +  +S+   + H R G
Sbjct: 25 GFLSGMFGVGGGFLITPLL--------IFYNIPPAVAVATGANQVVASSISGALAHFRRG 76

Query: 94 TINMK 98
          ++++K
Sbjct: 77 SLDIK 81


>gi|327192631|gb|EGE59572.1| putative permease protein [Rhizobium etli CNPAF512]
          Length = 288

 Score = 35.4 bits (80), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG ++ P+L        I  +I   VA+ T    +  +S+   + H R G
Sbjct: 6  GFLSGMFGVGGGFLITPLL--------IFYNIPPVVAVATGANQVVASSISGAITHFRRG 57

Query: 94 TINMKI 99
          T+++K+
Sbjct: 58 TLDVKL 63


>gi|320354125|ref|YP_004195464.1| hypothetical protein Despr_2025 [Desulfobulbus propionicus DSM
          2032]
 gi|320122627|gb|ADW18173.1| protein of unknown function DUF81 [Desulfobulbus propionicus DSM
          2032]
          Length = 129

 Score = 35.4 bits (80), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 7/70 (10%)

Query: 28 VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
          +  FL   +S +FG GGG  MVP+++ A +L        M++ +G+SL  I   + +S M
Sbjct: 19 IGGFLIAIMSSMFGFGGGPFMVPLMTVALRL-------PMYLVVGSSLLAIFFNTTVSTM 71

Query: 88 EHRRHGTINM 97
           H + G  ++
Sbjct: 72 RHYQFGNFDL 81


>gi|218681756|ref|ZP_03529531.1| hypothetical protein RetlC8_23708 [Rhizobium etli CIAT 894]
          Length = 191

 Score = 35.4 bits (80), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG ++ P+L        I  +I   VA+ T    +  +S+   + H R G
Sbjct: 25 GFLSGMFGVGGGFLITPLL--------IFYNIPPVVAVATGANQVVASSISGAITHFRRG 76

Query: 94 TINMKI 99
          T+++K+
Sbjct: 77 TLDVKL 82


>gi|56750151|ref|YP_170852.1| hypothetical protein syc0142_c [Synechococcus elongatus PCC 6301]
 gi|56685110|dbj|BAD78332.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 251

 Score = 35.4 bits (80), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 9/115 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++   L G L+GLFG+GGG +MVP       L  +   + +  A+ TSLGVI  T+  +
Sbjct: 136 VLITGALGGVLAGLFGIGGGTLMVP-------LQVLLMRVPIKTAVQTSLGVIIVTACSA 188

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTV-VTSLMISHVDKSFLNKAFAIFCLLMGI 139
              +   G + + +   W+ +  +  V VT+ ++  +    + + F +  L  GI
Sbjct: 189 LSGYAVAGDV-LWVQGFWLGLGGLLGVQVTTRLLPKLPAVLVQRCFQLLLLSFGI 242


>gi|209547817|ref|YP_002279734.1| hypothetical protein Rleg2_0208 [Rhizobium leguminosarum bv.
          trifolii WSM2304]
 gi|209533573|gb|ACI53508.1| protein of unknown function DUF81 [Rhizobium leguminosarum bv.
          trifolii WSM2304]
          Length = 307

 Score = 35.4 bits (80), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG ++ P+L        I  +I   VA+ T    +  +S+   + H R G
Sbjct: 25 GFLSGMFGVGGGFLITPLL--------IFYNIPPVVAVATGANQVVASSISGAITHFRRG 76

Query: 94 TINMKI 99
          T+++K+
Sbjct: 77 TLDVKL 82


>gi|313894189|ref|ZP_07827754.1| putative membrane protein [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441013|gb|EFR59440.1| putative membrane protein [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 264

 Score = 35.4 bits (80), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 83/207 (40%), Gaps = 32/207 (15%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D +V +     +  FL+  L  + G GGGL+ VP+               M+     S  
Sbjct: 3   DNIVLFYIFFTIVGFLAAMLGTIIGAGGGLIFVPLF--------------MYWFPEWSPS 48

Query: 77  VIAPTSVMSFMEHRRHGTI----NMKILKDWIFVLPITTVVTSLMISHVDKSFLNK---- 128
           +I  TS+ S M +   G+I      K+      V  + T   +++ + +   F  K    
Sbjct: 49  MIVGTSLFSVMCNAISGSIAYLKQKKVYISAALVFSVATFPGAILGAQMSGWFSGKGFMF 108

Query: 129 AFAIFCLLMGILMLKRDRLYCERKFPD------NYVKYIW---GMVTGFLSGALGVGGG- 178
           AF  F L    L+  ++    ERK          Y K +     +V GF+S   G+GGG 
Sbjct: 109 AFGCFMLCASFLIGFKNFRKGERKEESLTLDQLTYSKPVGISISIVVGFISSIFGIGGGL 168

Query: 179 IFTNLLMLFYGASIYKATATSAGVSAL 205
           I    L+   G   + ATATS  + A+
Sbjct: 169 IHVPALIYLMGFPTHMATATSQSILAV 195


>gi|218673769|ref|ZP_03523438.1| putative permease protein [Rhizobium etli GR56]
          Length = 306

 Score = 35.4 bits (80), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 34 GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
          G LSG+FGVGGG ++ P+L        I  +I   VA+ T    +  +S+   + H R G
Sbjct: 25 GFLSGMFGVGGGFLITPLL--------IFYNIPPVVAVATGANQVVASSISGAITHFRRG 76

Query: 94 TINMKI 99
          T+++K+
Sbjct: 77 TLDVKL 82


>gi|330808365|ref|YP_004352827.1| membrane protein [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327376473|gb|AEA67823.1| Conserved hypothetical protein, membrane protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 249

 Score = 35.4 bits (80), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 32/177 (18%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + +PVL   F   G+D  +    A GT+L ++ P  +++   + +   I ++       V
Sbjct: 28  IAIPVLGVWF---GLDQQL----AQGTALVMVVPNVMLALWRYHQRNRIELR------HV 74

Query: 107 LPITTV------VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY 160
           LP+ ++      + S+    +D + +   F  F  L+ + +    R++         ++Y
Sbjct: 75  LPLASMGFCFAWLGSIWAVGIDANSMRIGFVAF--LIALTLYNLARMFAANAPASAQMRY 132

Query: 161 IW------GMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATSAGVSALIAFPA 210
            W      G  +G + G  GVGG +  T +L   +G S       + G+S  +A P+
Sbjct: 133 GWPWLAVLGAASGTMGGLFGVGGAVVATPILTSIFGTS----QVVAQGLSLALALPS 185


>gi|21225763|ref|NP_631542.1| integral membrane protein [Streptomyces coelicolor A3(2)]
 gi|15021231|emb|CAC44674.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
          Length = 283

 Score = 35.4 bits (80), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 85/205 (41%), Gaps = 20/205 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           VD + L+ +   L+G  + LFG GGG V VPV+      +G D    + VA  TS  V+ 
Sbjct: 19  VDVVALLGI-GLLTGVTTVLFGFGGGFVAVPVVVWTDSALGAD---AIRVATATSALVMV 74

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  +     R     ++     + +L +     +L   H     +  AF  +  L  +
Sbjct: 75  VNAAFATAVTPRRVLAALRGGGPLLVLLGVGAAAGALAARHAPAGLIRWAFVAYVALTVV 134

Query: 140 -LMLK----RDRLYCE------RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
            L+L+    R R   E      R  P        G   G ++  LGVGG + T   M   
Sbjct: 135 DLLLRPGFLRPRAPAEAAPGTPRPLPAAV-----GAPVGAVAAFLGVGGSVMTVPAMRRA 189

Query: 189 GASIYKATATSAGVSALIAFPALLV 213
           G +++ ATA +  ++  IA PA  V
Sbjct: 190 GHTMHVATALANPLTLAIALPAAAV 214


>gi|269968534|ref|ZP_06182540.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269826869|gb|EEZ81197.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 226

 Score = 35.4 bits (80), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 24/107 (22%), Positives = 52/107 (48%), Gaps = 4/107 (3%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+ +  F L GI D+  +H+A+GTS+  +  T++ S   H +   ++  ++   +  + +
Sbjct: 34  PIFAFLFSLQGIADTEVVHLALGTSMASMIVTTLGSMRAHYKKENVDSTMVVKMLSGVLV 93

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN 156
            T   + + S++   +L   F++F L +   M     L  E ++  N
Sbjct: 94  GTFCATFVASYLQGVYLAGFFSVFMLYVAYKMF----LNTENEYNPN 136


>gi|154489152|ref|ZP_02030001.1| hypothetical protein BIFADO_02467 [Bifidobacterium adolescentis
           L2-32]
 gi|154083289|gb|EDN82334.1| hypothetical protein BIFADO_02467 [Bifidobacterium adolescentis
           L2-32]
          Length = 292

 Score = 35.4 bits (80), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 8/80 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D     I ++IV   L G LSG FG+GGG ++VP    A   +G+        A  TS+ 
Sbjct: 31  DGSARSIIVLIVVGMLVGVLSGTFGIGGGTMIVP----ALVWLGLSQ----RNAAATSML 82

Query: 77  VIAPTSVMSFMEHRRHGTIN 96
            I PTS+   + +   G ++
Sbjct: 83  AIVPTSISGVISYATGGHVD 102


>gi|90414495|ref|ZP_01222470.1| hypothetical protein P3TCK_00875 [Photobacterium profundum 3TCK]
 gi|90324403|gb|EAS40965.1| hypothetical protein P3TCK_00875 [Photobacterium profundum 3TCK]
          Length = 256

 Score = 35.4 bits (80), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 79/186 (42%), Gaps = 18/186 (9%)

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML---KRDRL 147
           R+G +++K +++ I    I + + +L++  +D   L        + + +  L   +  + 
Sbjct: 67  RNGFVSLKEMRNAIVFTFIGSAIGALLVQRIDAGVLTSLIPALLVCISLYFLFAPQTGKG 126

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALI 206
               K  +N   +  G   GF  G  G G G +FT   +      + +ATA +  ++   
Sbjct: 127 GGTPKLSENAFAFTVGTSIGFYDGFFGPGAGSLFTVCFVALAQFGLVEATARTKILNFTS 186

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFV---------NIGAVLIILPISILITPLATKLSYM 257
            F ALL  I     + GLP W +G +          +GA ++I     LI P+   +S +
Sbjct: 187 NFAALLFFI-----MAGLPIWEIGLLMAAGGFIGARMGAKVVISKGQKLIRPMVVIISMV 241

Query: 258 IGKKYL 263
           +  K L
Sbjct: 242 MAIKLL 247


>gi|302130179|ref|ZP_07256169.1| hypothetical protein PsyrptN_02225 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
          Length = 259

 Score = 35.4 bits (80), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 31/216 (14%)

Query: 17  DCVVDYICLIIVA--SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           +  VD   L I+A  +FL+G +  + G GGGL+  P L  A         +  H+ +GT+
Sbjct: 4   ELSVDLTTLAILAVVAFLAGFIDAIAG-GGGLLTTPALMTA--------GLPPHLVLGTN 54

Query: 75  -LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL--MISH-VDKSFLNKAF 130
            L     ++  SF  +RR     +   + W+  +  T V  +L  +I+H +   +LN+  
Sbjct: 55  KLSSTFGSATASFTFYRR----KLFHPRQWLHAIVGTAVGAALGAIIAHYLPAEWLNQML 110

Query: 131 AIFCLLMGILMLKRDRLYCERKFP---DNYVKYIW----GMVTGFLSGALGVGGGIF-TN 182
            +     G+ +L         K P   D  +K  W    G+  GF  G  G G G F T 
Sbjct: 111 PVIVFGCGLYLL----FGGTPKAPLDSDAPIKKKWQLPQGLGLGFYDGVAGPGTGAFWTV 166

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             +L Y   + KA+  +  ++ +    AL V I+SG
Sbjct: 167 STLLMYPVDLVKASGVARSMNFVSNIVALSVFIFSG 202


>gi|149184043|ref|ZP_01862401.1| hypothetical Membrane Spanning Protein [Bacillus sp. SG-1]
 gi|148848249|gb|EDL62541.1| hypothetical Membrane Spanning Protein [Bacillus sp. SG-1]
          Length = 176

 Score = 35.4 bits (80), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 13/80 (16%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           +F+ G  SGLFG+GGG +MVP +   F           HVA+ TS+ ++  ++++S   H
Sbjct: 65  AFIVGFSSGLFGIGGGSLMVPAMILIFLF-------PPHVAVATSMFMVFLSALVSSATH 117

Query: 90  RRHGTINMKILKDWIFVLPI 109
              G IN      W++ L +
Sbjct: 118 IYLGNIN------WLYALAV 131


>gi|58039041|ref|YP_191005.1| hypothetical protein GOX0571 [Gluconobacter oxydans 621H]
 gi|58001455|gb|AAW60349.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H]
          Length = 255

 Score = 35.4 bits (80), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 47/106 (44%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           HVA+GTS   +A  ++   + H R GT+  K    +     +  ++ +     V+   L 
Sbjct: 42  HVAIGTSAMAVAVNALTGLVSHARAGTVKWKCAAIFAPCGVVGALIGAAFGKAVNGQKLL 101

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGAL 173
             FA+  +++G+LML+  R   E     N       M+ G  +G L
Sbjct: 102 LCFALLMVVVGVLMLRGRRNKGEAGAACNRQNMPRVMMAGAGTGVL 147


>gi|189500913|ref|YP_001960383.1| hypothetical protein Cphamn1_1991 [Chlorobium phaeobacteroides BS1]
 gi|189496354|gb|ACE04902.1| conserved hypothetical protein [Chlorobium phaeobacteroides BS1]
          Length = 121

 Score = 35.4 bits (80), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 11/113 (9%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPTSVMSFMEHRR 91
           +G LSG+FG+GGGL++VP L     ++G       H A  TSL  ++ P  ++  +E+ R
Sbjct: 13  AGVLSGMFGIGGGLIIVPAL---VLILGFSQ----HTANATSLIALLLPVGLLGVLEYYR 65

Query: 92  HGTINMKILKDWIFV---LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            G I  + L   +F+   L       + + + + +  L K FA+F  ++ + M
Sbjct: 66  AGKITSEHLWYGVFIAIGLFAGAFFGAKIATSLSQDMLRKIFAVFIGIVAVRM 118


>gi|260554127|ref|ZP_05826388.1| permease [Acinetobacter sp. RUH2624]
 gi|260404755|gb|EEW98264.1| permease [Acinetobacter sp. RUH2624]
          Length = 263

 Score = 35.4 bits (80), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L+G+ GVGGG V+VP L K   L        MH  + TSL +I   S +S + H  
Sbjct: 150 IAGLLTGMLGVGGGFVIVPALRKVTNL-------DMHSIVATSLMIIFLISGISIVMHIA 202

Query: 92  HG 93
            G
Sbjct: 203 EG 204


>gi|228986764|ref|ZP_04146893.1| hypothetical protein bthur0001_34400 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228772936|gb|EEM21373.1| hypothetical protein bthur0001_34400 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 267

 Score = 35.4 bits (80), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 38/225 (16%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHG----TINMKILKDWIFVLPITTVVTSLMISH 120
           I +HVA+ TSL  +A T++   + H R G    TI   +     F   I + + SL+  +
Sbjct: 51  IPIHVALATSLTAMAFTTLSGVISHHREGNVVLTIGGIVGGCGAFGSYIGSKIGSLIPPY 110

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCER--KFPD----NYVKYI-WGMVTGFLSGAL 173
           +   F      +  + M I ++K       R  K  D    N +K I  G+VTG ++G+ 
Sbjct: 111 LLHWFTAGMLFLSAIFMCIKLIKFQNKEEVRLVKIKDISKENIMKCICLGLVTGMMAGSF 170

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I +    S G + L+  P     I  G G        LG+ 
Sbjct: 171 GIGSAPFIQLGLMVLLGLTIQQ----SVGTTMLVILP-----IAIGGG--------LGYS 213

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKY------LTIGFSMIM 271
           + G +  IL + +LI    T L   IG K+      + + FSMIM
Sbjct: 214 SEGYLDYILLLQVLI---GTMLGAYIGAKFTNYAPRMLLKFSMIM 255


>gi|269798825|ref|YP_003312725.1| hypothetical protein Vpar_1769 [Veillonella parvula DSM 2008]
 gi|269095454|gb|ACZ25445.1| protein of unknown function DUF81 [Veillonella parvula DSM 2008]
          Length = 269

 Score = 35.4 bits (80), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 7/60 (11%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           SF  G +S +FG+GGGL+ VP L     LMG       H+A  TS  ++A ++ +  + H
Sbjct: 157 SFFVGFISSIFGIGGGLIHVPAL---IYLMGFPT----HMATATSQSILAVSTTVGVITH 209


>gi|239918630|ref|YP_002958188.1| predicted permease [Micrococcus luteus NCTC 2665]
 gi|281415152|ref|ZP_06246894.1| predicted permease [Micrococcus luteus NCTC 2665]
 gi|239839837|gb|ACS31634.1| predicted permease [Micrococcus luteus NCTC 2665]
          Length = 256

 Score = 35.4 bits (80), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 19/109 (17%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGG ++VP L        +   + M  AMGTSL VI   ++  F+           +  D
Sbjct: 155 GGGFLIVPALV-------LLAGLPMAAAMGTSLLVITVQTLAGFVGKLP------AVEPD 201

Query: 103 WIFVLPITTVVTS------LMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           W F+L +T V  +       ++  V  + L +AF  F L+MG+ +L  +
Sbjct: 202 WPFLLALTGVSVAGALAGVALMQRVPAATLRQAFGWFVLVMGVAVLTVE 250


>gi|332187656|ref|ZP_08389391.1| hypothetical protein SUS17_2851 [Sphingomonas sp. S17]
 gi|332012222|gb|EGI54292.1| hypothetical protein SUS17_2851 [Sphingomonas sp. S17]
          Length = 262

 Score = 35.4 bits (80), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 12/129 (9%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           GL G GG ++ VP++     L+G+      HVA+GTS   +A  +  + + H R  TI  
Sbjct: 23  GLVGGGGSILAVPLM---VYLVGVASP---HVAIGTSALAVAANAGANLVPHARQRTIKW 76

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD------RLYCER 151
           +    +           S +    D   L   FA+  +L+G LMLK+        + C R
Sbjct: 77  RCAGMFAAAGVAGAYAGSTLGKAFDGQKLLFLFALLMILVGALMLKKRGDPGNPDVQCRR 136

Query: 152 KFPDNYVKY 160
           +     + Y
Sbjct: 137 ENAPKVIGY 145


>gi|218667447|ref|YP_002426656.1| hypothetical protein AFE_2258 [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|218519660|gb|ACK80246.1| membrane protein, putative [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 296

 Score = 35.4 bits (80), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 94/236 (39%), Gaps = 65/236 (27%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I LII    + G LSGL GVGGG ++ P+L        I   +   VA+GT    I   S
Sbjct: 5   IWLIIGFGLIVGFLSGLTGVGGGFLITPLL--------IFVGVPPLVAVGTGAAQIVGAS 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL------ 136
            +    H R G ++M++     F+L   + +  L+  HV +  +  A   F L+      
Sbjct: 57  AVGSYAHWRMGNVDMRM----AFILLAGSWMGGLLGVHVAR--ILDASGYFGLVVTFLYV 110

Query: 137 -----MGILMLKR-------------------------DRLYCERKFPDNYVKY------ 160
                +GI ML                           DRL    +FP + ++       
Sbjct: 111 GLLGFIGISMLVESTLAMRWGHHPGKNKKKARAGIPWLDRLPWRMEFPVSGLRLSILAPV 170

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFY---------GASIYKATATSAGVSALIA 207
           + G V G ++  +GVGGG     +ML+          G S+++   TSA V  L A
Sbjct: 171 LLGFVVGIMAALMGVGGGFVMVPIMLYLLKMPTRVVVGTSLFQLLFTSAEVGILQA 226


>gi|148556646|ref|YP_001264228.1| hypothetical protein Swit_3745 [Sphingomonas wittichii RW1]
 gi|148501836|gb|ABQ70090.1| protein of unknown function DUF81 [Sphingomonas wittichii RW1]
          Length = 262

 Score = 35.4 bits (80), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 12/129 (9%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           GL G GG ++ VP++     L+G+      HVA+GTS   +A  +  + + H R  TI  
Sbjct: 23  GLVGGGGSILAVPLM---VYLVGVASP---HVAIGTSALAVAANAGANLVPHARQRTIKW 76

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD------RLYCER 151
           +    +           S +    D   L   FA+  +L+G LMLK+        + C R
Sbjct: 77  RCAGMFAAAGVAGAYAGSTLGKAFDGQKLLFLFALLMILVGALMLKKRGDPGNPDVQCRR 136

Query: 152 KFPDNYVKY 160
           +     + Y
Sbjct: 137 ENAPKVIGY 145


>gi|219851806|ref|YP_002466238.1| protein of unknown function DUF81 [Methanosphaerula palustris
           E1-9c]
 gi|219546065|gb|ACL16515.1| protein of unknown function DUF81 [Methanosphaerula palustris
           E1-9c]
          Length = 267

 Score = 35.4 bits (80), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 9/133 (6%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           SK   V  I L+I  + + G +SG+ G  GG + VP    A  ++G+     +H+A+ TS
Sbjct: 143 SKPIRVPCIHLVIWGA-MGGLVSGITGTSGGALFVP----ALVVLGVP----IHLAVATS 193

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           L  I PTS+     H   G I++  +  +     +     + +   +    + + F I  
Sbjct: 194 LLTIIPTSITGAATHIALGNISLPYVVVYGAGAVLGAFAGASLAPRIQADHIKRVFGILL 253

Query: 135 LLMGILMLKRDRL 147
           + + +LM+++  L
Sbjct: 254 ISIALLMIQQKIL 266


>gi|305666470|ref|YP_003862757.1| putative transmembrane protein [Maribacter sp. HTCC2170]
 gi|88708737|gb|EAR00972.1| possible transmembrane protein [Maribacter sp. HTCC2170]
          Length = 257

 Score = 35.4 bits (80), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 23/122 (18%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +A+  +L V++ ++++ F    +HG      LKD++   P   ++TS+ ++ +  SF  K
Sbjct: 50  IALVCNLIVVSGSTILYF----KHGHAR---LKDFV---PF--IITSIPMAFLGASFRLK 97

Query: 129 AFAIFCLLMGILMLKRDRLYCE----------RKFPDNYVKYIWGMVTGFLSGALGVGGG 178
               F +L   L++    L  +          +++P  Y+ Y+ G   GFLSG +G+GGG
Sbjct: 98  EEVFFIVLGASLIISSLFLVWQTSGAKWSEPTKEYP-RYLSYVIGASIGFLSGLVGIGGG 156

Query: 179 IF 180
           IF
Sbjct: 157 IF 158


>gi|161528556|ref|YP_001582382.1| hypothetical protein Nmar_1048 [Nitrosopumilus maritimus SCM1]
 gi|160339857|gb|ABX12944.1| protein of unknown function DUF81 [Nitrosopumilus maritimus SCM1]
          Length = 257

 Score = 35.4 bits (80), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 15/74 (20%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I ASF +G +S  FG+GGG+V VP+               M V MG ++   APTS M  
Sbjct: 136 IGASFFAGIISSFFGIGGGIVFVPL---------------MVVGMGMTMKKAAPTSQMIL 180

Query: 87  MEHRRHGTINMKIL 100
           +     G I   +L
Sbjct: 181 LFASSSGVIVHSLL 194


>gi|121536019|ref|ZP_01667809.1| conserved hypothetical protein [Thermosinus carboxydivorans Nor1]
 gi|121305409|gb|EAX46361.1| conserved hypothetical protein [Thermosinus carboxydivorans Nor1]
          Length = 118

 Score = 35.4 bits (80), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 20/79 (25%), Positives = 42/79 (53%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           +I  H A GTSL V+ PT+++S + +  HG  ++ +  + I    I   + + ++  +  
Sbjct: 38  AIAQHTAHGTSLAVVIPTAIVSAIIYGFHGNADLGVSLNLIVGSVIGASIGARIMKKIPA 97

Query: 124 SFLNKAFAIFCLLMGILML 142
           + L + F I  + +G+ M+
Sbjct: 98  AQLKRLFGILLVFVGLRMV 116


>gi|257465039|ref|ZP_05629410.1| permease [Actinobacillus minor 202]
 gi|257450699|gb|EEV24742.1| permease [Actinobacillus minor 202]
          Length = 266

 Score = 35.4 bits (80), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 7/73 (9%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME-HR 90
           L+  +S LFG+GGG++MVP+L   F          + +   TSL  +  T++++ +  ++
Sbjct: 15  LTNIMSALFGIGGGVLMVPILHTLF------PEFPLQMVAATSLTTVMGTALINLISFYK 68

Query: 91  RHGTINMKILKDW 103
           +  ++ +K L  W
Sbjct: 69  QKISVELKPLLLW 81


>gi|319956493|ref|YP_004167756.1| hypothetical protein Nitsa_0740 [Nitratifractor salsuginis DSM
           16511]
 gi|319418897|gb|ADV46007.1| protein of unknown function DUF81 [Nitratifractor salsuginis DSM
           16511]
          Length = 248

 Score = 35.4 bits (80), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 12/149 (8%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           GTLSG FG+GGG V+VPVL     LMG         A+G S+  +  +SV     + + G
Sbjct: 13  GTLSGFFGIGGGTVLVPVL----LLMGFG----FKHAVGISIMQMVFSSVYGSYLNIKKG 64

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE--- 150
           ++ +       F   +   ++  +  +V    L   F  F L   I M+       E   
Sbjct: 65  SLQLGEGLFVGFGGFLGGYLSGYITPYVPDRVLQTVFIGFVLFALIRMMTSKAHSDEEES 124

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
           R  P   + ++ G+  G ++ ++GVGG I
Sbjct: 125 RSLPKALL-FVIGVGIGVIAISIGVGGAI 152


>gi|332853863|ref|ZP_08435022.1| hypothetical protein HMPREF0021_02605 [Acinetobacter baumannii
           6013150]
 gi|332865973|ref|ZP_08436741.1| hypothetical protein HMPREF0020_00347 [Acinetobacter baumannii
           6013113]
 gi|332728344|gb|EGJ59723.1| hypothetical protein HMPREF0021_02605 [Acinetobacter baumannii
           6013150]
 gi|332734903|gb|EGJ65990.1| hypothetical protein HMPREF0020_00347 [Acinetobacter baumannii
           6013113]
          Length = 263

 Score = 35.4 bits (80), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G L+G+ GVGGG V+VP L K   L        MH  + TSL +I   S +S + H  
Sbjct: 150 IAGLLTGMLGVGGGFVIVPALRKVTNL-------DMHSIVATSLMIIFLISGISIVMHIA 202

Query: 92  HG 93
            G
Sbjct: 203 EG 204


Searching..................................................done


Results from round 2




>gi|254780993|ref|YP_003065406.1| hypothetical protein CLIBASIA_04470 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040670|gb|ACT57466.1| hypothetical protein CLIBASIA_04470 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 279

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 279/279 (100%), Positives = 279/279 (100%)

Query: 1   MYDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG 60
           MYDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG
Sbjct: 1   MYDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG 60

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
           IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH
Sbjct: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
           VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF
Sbjct: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
           TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII
Sbjct: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA
Sbjct: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279


>gi|313112044|ref|ZP_07797828.1| putative permease [Pseudomonas aeruginosa 39016]
 gi|310884330|gb|EFQ42924.1| putative permease [Pseudomonas aeruginosa 39016]
          Length = 267

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 124/256 (48%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L IV    +G L+GLFGVGGGL++VP L  +F   G    +   +A+GTSL  I  TS
Sbjct: 3   FLLYIVLGACAGVLAGLFGVGGGLIIVPALVFSFTAHGFGGDVLTQMAVGTSLATIVFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S +EH R G +   +       + + + + +L  + +    L K   +F +L+ + M+
Sbjct: 63  INSILEHHRRGAVRWPVFAWMTLGILVGSALGALTAAQIKGPLLQKIIGVFAILVALQMV 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R+ P      + G V G+ S   G+GGG  T   + +    + +A ATS+  
Sbjct: 123 LDLKPKGNREVPGKGGLTLAGAVIGWASAIFGIGGGSLTVPFLSWRSVPMQQAVATSSAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA    L  I  GW    LP WSLG+V + A++ I   S+L      +L++ +  + 
Sbjct: 183 GLPIAISGALSFIAVGWHNPQLPEWSLGYVYLPALVGIAATSMLFARFGARLAHRLSPRV 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F++++F+    F
Sbjct: 243 LKRLFALLLFSVGISF 258



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 20/132 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +A  + G  S +FG+GGG + VP LS          S+ M  A+ TS     P ++  
Sbjct: 139 LTLAGAVIGWASAIFGIGGGSLTVPFLSW--------RSVPMQQAVATSSACGLPIAISG 190

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G + +  L        +     + +   +    L + FA+ 
Sbjct: 191 ALSFIAVGWHNPQLPEWSLGYVYLPALVGIAATSMLFARFGARLAHRLSPRVLKRLFALL 250

Query: 134 CLLMGILMLKRD 145
              +GI  L  D
Sbjct: 251 LFSVGISFLTPD 262


>gi|15595537|ref|NP_249031.1| hypothetical protein PA0340 [Pseudomonas aeruginosa PAO1]
 gi|107099324|ref|ZP_01363242.1| hypothetical protein PaerPA_01000336 [Pseudomonas aeruginosa PACS2]
 gi|218889081|ref|YP_002437945.1| putative permease [Pseudomonas aeruginosa LESB58]
 gi|254237424|ref|ZP_04930747.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254243439|ref|ZP_04936761.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296386836|ref|ZP_06876335.1| putative permease [Pseudomonas aeruginosa PAb1]
 gi|9946189|gb|AAG03729.1|AE004472_1 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|126169355|gb|EAZ54866.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126196817|gb|EAZ60880.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218769304|emb|CAW25064.1| putative permease [Pseudomonas aeruginosa LESB58]
          Length = 267

 Score =  246 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/256 (29%), Positives = 124/256 (48%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L IV    +G L+GLFGVGGGL++VP L  +F   G    +   +A+GTSL  I  TS
Sbjct: 3   FLLYIVLGACAGVLAGLFGVGGGLIIVPALVFSFTAHGFGGDVLTQMAVGTSLATIVFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S +EH R G +   +       + I + + +L  + +    L K   +F +L+ + M+
Sbjct: 63  INSILEHHRRGAVRWPVFAWMTLGILIGSALGALTAAQIKGPLLQKIIGVFAILVALQMV 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R+ P      + G V G+ S   G+GGG  T   + +    + +A ATS+  
Sbjct: 123 LDLKPKGSREVPGKGGLTLAGAVIGWASAIFGIGGGSLTVPFLSWRSVPMQQAVATSSAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA    L  I  GW    LP WSLG+V + A++ I   S+L      +L++ +  + 
Sbjct: 183 GLPIAISGALSFIAVGWHNPQLPEWSLGYVYLPALVGIAATSMLFARFGARLAHRLSPRV 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F++++F+    F
Sbjct: 243 LKRLFALLLFSVGISF 258



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 20/132 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +A  + G  S +FG+GGG + VP LS          S+ M  A+ TS     P ++  
Sbjct: 139 LTLAGAVIGWASAIFGIGGGSLTVPFLSW--------RSVPMQQAVATSSACGLPIAISG 190

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G + +  L        +     + +   +    L + FA+ 
Sbjct: 191 ALSFIAVGWHNPQLPEWSLGYVYLPALVGIAATSMLFARFGARLAHRLSPRVLKRLFALL 250

Query: 134 CLLMGILMLKRD 145
              +GI  L  D
Sbjct: 251 LFSVGISFLTPD 262


>gi|49082896|gb|AAT50848.1| PA0340 [synthetic construct]
          Length = 268

 Score =  246 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/256 (29%), Positives = 124/256 (48%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L IV    +G L+GLFGVGGGL++VP L  +F   G    +   +A+GTSL  I  TS
Sbjct: 3   FLLYIVLGACAGVLAGLFGVGGGLIIVPALVFSFTAHGFGGDVLTQMAVGTSLATIVFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S +EH R G +   +       + I + + +L  + +    L K   +F +L+ + M+
Sbjct: 63  INSILEHHRRGAVRWPVFAWMTLGILIGSALGALTAAQIKGPLLQKIIGVFAILVALQMV 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R+ P      + G V G+ S   G+GGG  T   + +    + +A ATS+  
Sbjct: 123 LDLKPKGSREVPGKGGLTLAGAVIGWASAIFGIGGGSLTVPFLSWRSVPMQQAVATSSAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA    L  I  GW    LP WSLG+V + A++ I   S+L      +L++ +  + 
Sbjct: 183 GLPIAISGALSFIAVGWHNPQLPEWSLGYVYLPALVGIAATSMLFARFGARLAHRLSPRV 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F++++F+    F
Sbjct: 243 LKRLFALLLFSVGISF 258



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 20/132 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +A  + G  S +FG+GGG + VP LS          S+ M  A+ TS     P ++  
Sbjct: 139 LTLAGAVIGWASAIFGIGGGSLTVPFLSW--------RSVPMQQAVATSSACGLPIAISG 190

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G + +  L        +     + +   +    L + FA+ 
Sbjct: 191 ALSFIAVGWHNPQLPEWSLGYVYLPALVGIAATSMLFARFGARLAHRLSPRVLKRLFALL 250

Query: 134 CLLMGILMLKRD 145
              +GI  L  D
Sbjct: 251 LFSVGISFLTPD 262


>gi|104784146|ref|YP_610644.1| hypothetical protein PSEEN5236 [Pseudomonas entomophila L48]
 gi|95113133|emb|CAK17861.1| conserved hypothetical protein; putative membrane protein
           [Pseudomonas entomophila L48]
          Length = 260

 Score =  245 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 74/256 (28%), Positives = 124/256 (48%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L ++    +G L+GLFGVGGG+++VPVL  +F L G D S+  H+A+GTSL  I  TS
Sbjct: 3   FALYLLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDPSVLTHLAVGTSLATIVFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + +EH+R G +   I       + +  +V +   S +    L K   +F L++   M 
Sbjct: 63  INAVLEHQRKGAVQWPIFAWMTVGILLGALVGAKTASLIQGPMLQKIIGVFALVIAAQMA 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R  P        G V G+ S   G+GGG  T   + +    + +A ATS+  
Sbjct: 123 LDLKPKASRGIPGKPGLTAAGGVIGWASAIFGIGGGSLTVPFLTWRSLPMQQAVATSSAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA  + L  ++ GW  + LP  S+G+V + A++ I   S+       +L++ +  + 
Sbjct: 183 GLPIALASALSFMWLGWHEDHLPAHSVGYVYLPALVGIAVTSMFFARFGARLAHKLSPRV 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F+ ++F     F
Sbjct: 243 LKRLFAALLFCVGLSF 258



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 39/131 (29%), Gaps = 20/131 (15%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY--------GASIYKATATSAGVSALIAF 208
            +  + G   G L+G  GVGGGI    +++F             + A  TS       + 
Sbjct: 4   ALYLLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDPSVLTHLAVGTSLATIVFTSI 63

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            A+            L     G V       +    +L   +  K + +I    L     
Sbjct: 64  NAV------------LEHQRKGAVQWPIFAWMTVGILLGALVGAKTASLIQGPMLQKIIG 111

Query: 269 MIMFTTSFVFA 279
           +     +   A
Sbjct: 112 VFALVIAAQMA 122



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 44/129 (34%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +  A  + G  S +FG+GGG + VP L+          S+ M  A+ TS     P ++ S
Sbjct: 139 LTAAGGVIGWASAIFGIGGGSLTVPFLTW--------RSLPMQQAVATSSACGLPIALAS 190

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G + +  L              + +   +    L + FA  
Sbjct: 191 ALSFMWLGWHEDHLPAHSVGYVYLPALVGIAVTSMFFARFGARLAHKLSPRVLKRLFAAL 250

Query: 134 CLLMGILML 142
              +G+  L
Sbjct: 251 LFCVGLSFL 259


>gi|116054068|ref|YP_788511.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115589289|gb|ABJ15304.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 267

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 76/256 (29%), Positives = 124/256 (48%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L IV    +G L+GLFGVGGGL++VP L  +F   G    +   +A+GTSL  I  TS
Sbjct: 3   FLLYIVLGACAGVLAGLFGVGGGLIIVPALVFSFTAHGFGGDVLTQMAVGTSLATIVFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S +EH R G +   +       + I + + +L  + +    L K   +F +L+ + M+
Sbjct: 63  INSILEHHRRGAVRWPVFAWMTLGILIGSALGALTAAQIKGLLLQKIIGVFAILVALQMV 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R+ P      + G V G+ S   G+GGG  T   + +    + +A ATS+  
Sbjct: 123 LDLKPKGSREVPGKGGLTLAGAVIGWASAIFGIGGGSLTVPFLSWRSVPMQQAVATSSAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA    L  I  GW    LP WSLG+V + A++ I   S+L      +L++ +  + 
Sbjct: 183 GLPIAISGALSFIAVGWHNPQLPEWSLGYVYLPALVGIAATSMLFARFGARLAHRLSPRV 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F++++F+    F
Sbjct: 243 LKRLFALLLFSVGISF 258



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 20/132 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +A  + G  S +FG+GGG + VP LS          S+ M  A+ TS     P ++  
Sbjct: 139 LTLAGAVIGWASAIFGIGGGSLTVPFLSW--------RSVPMQQAVATSSACGLPIAISG 190

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G + +  L        +     + +   +    L + FA+ 
Sbjct: 191 ALSFIAVGWHNPQLPEWSLGYVYLPALVGIAATSMLFARFGARLAHRLSPRVLKRLFALL 250

Query: 134 CLLMGILMLKRD 145
              +GI  L  D
Sbjct: 251 LFSVGISFLTPD 262


>gi|152985930|ref|YP_001345828.1| hypothetical protein PSPA7_0433 [Pseudomonas aeruginosa PA7]
 gi|150961088|gb|ABR83113.1| domain of unknown function [Pseudomonas aeruginosa PA7]
          Length = 260

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 76/256 (29%), Positives = 123/256 (48%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L IV    +G L+GLFGVGGGL++VP L  +F   G    +   +A+GTSL  I  TS
Sbjct: 3   FLLYIVLGACAGVLAGLFGVGGGLIIVPALVFSFTAHGFGGDVLTQMAVGTSLATIVFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S +EH R G +   +       + I + + +L  + +    L K   +F +L+ + M 
Sbjct: 63  INSILEHHRRGAVRWPVFAWMTLGILIGSALGALTAAQIKGPLLQKIIGVFAILVALQMT 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +     + P      + G V G+ S   G+GGG  T   + + G  + +A ATS+  
Sbjct: 123 LDLKPRGRHEVPGKGGLTVAGAVIGWASAIFGIGGGSLTVPFLSWRGVPMQQAVATSSAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA    L  I  GW    LP WSLG+V + A++ I   S+L      +L++ +  + 
Sbjct: 183 GLPIAISGALSFIAVGWHNPQLPEWSLGYVYLPALVGIAATSMLFARFGARLAHRLSPRG 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F++++F+    F
Sbjct: 243 LKRLFALLLFSVGVSF 258



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + VA  + G  S +FG+GGG + VP LS           + M  A+ TS     P ++  
Sbjct: 139 LTVAGAVIGWASAIFGIGGGSLTVPFLSW--------RGVPMQQAVATSSACGLPIAISG 190

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G + +  L        +     + +   +    L + FA+ 
Sbjct: 191 ALSFIAVGWHNPQLPEWSLGYVYLPALVGIAATSMLFARFGARLAHRLSPRGLKRLFALL 250

Query: 134 CLLMGILML 142
              +G+  L
Sbjct: 251 LFSVGVSFL 259


>gi|26991819|ref|NP_747244.1| hypothetical protein PP_5143 [Pseudomonas putida KT2440]
 gi|148550250|ref|YP_001270352.1| hypothetical protein Pput_5050 [Pseudomonas putida F1]
 gi|24986933|gb|AAN70708.1|AE016714_6 conserved hypothetical protein [Pseudomonas putida KT2440]
 gi|148514308|gb|ABQ81168.1| protein of unknown function DUF81 [Pseudomonas putida F1]
          Length = 260

 Score =  244 bits (625), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 119/256 (46%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L ++    +G L+GLFGVGGG+++VPVL  +F L G D S+  H+A+GTSL  I  TS
Sbjct: 3   FVLYLLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLATIVFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +  EH R   +   I       + +   V +   S +    L K   +F L++   M 
Sbjct: 63  INAVREHHRKRAVQWPIFIWMTIGILLGAGVGAKTASLIQGPLLQKIIGVFALVIAAQMA 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R  P        G V G+ S   G+GGG  T   + +    + +A ATS+  
Sbjct: 123 LDLKPKASRGVPGKPGLIGAGGVIGWASAIFGIGGGSLTVPFLTWRSLPMQQAVATSSAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA  + L  +  GW    LPP SLG+V + A++ I   S+       +L++ +  + 
Sbjct: 183 GLPIAVASALSFMLLGWHEEHLPPHSLGYVYLPALVGIAVTSMFFARFGARLAHKLSPRL 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F+ ++F     F
Sbjct: 243 LKRLFAALLFCVGLSF 258



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 45/129 (34%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I A  + G  S +FG+GGG + VP L+          S+ M  A+ TS     P +V S
Sbjct: 139 LIGAGGVIGWASAIFGIGGGSLTVPFLTW--------RSLPMQQAVATSSACGLPIAVAS 190

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G + +  L              + +   +    L + FA  
Sbjct: 191 ALSFMLLGWHEEHLPPHSLGYVYLPALVGIAVTSMFFARFGARLAHKLSPRLLKRLFAAL 250

Query: 134 CLLMGILML 142
              +G+  L
Sbjct: 251 LFCVGLSFL 259



 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 37/128 (28%), Gaps = 20/128 (15%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY--------GASIYKATATSAGVSALIAFPAL 211
            + G   G L+G  GVGGGI    +++F             + A  TS       +  A+
Sbjct: 7   LLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLATIVFTSINAV 66

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
                               V     + +    +L   +  K + +I    L     +  
Sbjct: 67  ------------REHHRKRAVQWPIFIWMTIGILLGAGVGAKTASLIQGPLLQKIIGVFA 114

Query: 272 FTTSFVFA 279
              +   A
Sbjct: 115 LVIAAQMA 122


>gi|77461596|ref|YP_351103.1| hypothetical protein Pfl01_5375 [Pseudomonas fluorescens Pf0-1]
 gi|77385599|gb|ABA77112.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 260

 Score =  244 bits (624), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 78/256 (30%), Positives = 121/256 (47%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L +     +G L+GLFGVGGG+++VPVL  +F L G D SI  H+A+GTSL  I  TS
Sbjct: 3   FLLYLALGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDPSILTHLAVGTSLATIIFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V +  EH R G +   I +     + +     +L    +    L K   +F L++   + 
Sbjct: 63  VNAVREHHRRGAVRWPIFRWMTVGILLGAGFGALTAEAISGPNLQKIIGVFALVIAAQLA 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R  P      + G V G+ S   G+GGG  T   + +    + +A ATS+  
Sbjct: 123 LDVKPKASRTVPGKLGLTVAGSVIGWASAIFGIGGGSLTVPFLTWRSVPMQQAVATSSAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA  + +  +  GW    LP  SLGFV + A+L I   S++   L  +L++ +  K 
Sbjct: 183 GLPIAVASAISFMILGWHDPLLPAHSLGFVYLPALLGIALTSMVFARLGARLAHRLSPKL 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F+ ++F     F
Sbjct: 243 LKRLFAALLFCVGLSF 258



 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 47/130 (36%), Gaps = 20/130 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + VA  + G  S +FG+GGG + VP L+          S+ M  A+ TS     P +V S
Sbjct: 139 LTVAGSVIGWASAIFGIGGGSLTVPFLTW--------RSVPMQQAVATSSACGLPIAVAS 190

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G + +  L        +   + + +   +    L + FA  
Sbjct: 191 AISFMILGWHDPLLPAHSLGFVYLPALLGIALTSMVFARLGARLAHRLSPKLLKRLFAAL 250

Query: 134 CLLMGILMLK 143
              +G+  L 
Sbjct: 251 LFCVGLSFLF 260



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 33/128 (25%), Gaps = 20/128 (15%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY--------GASIYKATATSAGVSALIAFPAL 211
              G   G L+G  GVGGGI    +++F             + A  TS       +  A+
Sbjct: 7   LALGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDPSILTHLAVGTSLATIIFTSVNAV 66

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
                             G V       +    +L        +  I    L     +  
Sbjct: 67  ------------REHHRRGAVRWPIFRWMTVGILLGAGFGALTAEAISGPNLQKIIGVFA 114

Query: 272 FTTSFVFA 279
              +   A
Sbjct: 115 LVIAAQLA 122


>gi|313501118|gb|ADR62484.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 260

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 76/256 (29%), Positives = 120/256 (46%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L ++    +G L+GLFGVGGG+++VPVL  +F L G D S+  H+A+GTSL  I  TS
Sbjct: 3   FVLYLLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLATIVFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +  EH R   +   I     F + +   V +   S +    L K   +F L++   M 
Sbjct: 63  INAVREHHRKRAVQWPIFVWMTFGILLGAGVGAKTASLIQGPLLQKIIGVFALVIAAQMA 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R  P        G V G+ S   G+GGG  T   + +    + +A ATS+  
Sbjct: 123 LDLKPKASRGVPGKPGLIGAGGVIGWASAIFGIGGGSLTVPFLTWRSLPMQQAVATSSAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA  + L  +  GW    LPP SLG+V + A++ I   S+       +L++ +  + 
Sbjct: 183 GLPIAVASALSFMLLGWHEAHLPPHSLGYVYLPALVGIAVTSMFFARFGARLAHKLSPRL 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F+ ++F     F
Sbjct: 243 LKRLFAALLFCVGLSF 258



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 45/129 (34%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I A  + G  S +FG+GGG + VP L+          S+ M  A+ TS     P +V S
Sbjct: 139 LIGAGGVIGWASAIFGIGGGSLTVPFLTW--------RSLPMQQAVATSSACGLPIAVAS 190

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G + +  L              + +   +    L + FA  
Sbjct: 191 ALSFMLLGWHEAHLPPHSLGYVYLPALVGIAVTSMFFARFGARLAHKLSPRLLKRLFAAL 250

Query: 134 CLLMGILML 142
              +G+  L
Sbjct: 251 LFCVGLSFL 259



 Score = 43.5 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 37/128 (28%), Gaps = 20/128 (15%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY--------GASIYKATATSAGVSALIAFPAL 211
            + G   G L+G  GVGGGI    +++F             + A  TS       +  A+
Sbjct: 7   LLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLATIVFTSINAV 66

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
                               V     + +    +L   +  K + +I    L     +  
Sbjct: 67  ------------REHHRKRAVQWPIFVWMTFGILLGAGVGAKTASLIQGPLLQKIIGVFA 114

Query: 272 FTTSFVFA 279
              +   A
Sbjct: 115 LVIAAQMA 122


>gi|229593187|ref|YP_002875306.1| hypothetical protein PFLU5817 [Pseudomonas fluorescens SBW25]
 gi|229365053|emb|CAY53235.1| conserved hypothetical membrane protein [Pseudomonas fluorescens
           SBW25]
          Length = 260

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 76/256 (29%), Positives = 120/256 (46%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L ++    +G L+GLFGVGGG+++VPVL  +F L G D  +  H+A+GTSL  I  TS
Sbjct: 3   FLLYLLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDPQVLTHLAVGTSLATIIFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V +  EH R G +   I       + +     +L    +    L K   +F LL+ + + 
Sbjct: 63  VNAVREHHRRGAVRWPIFVWMTVGILLGAGFGALTAEAISGPHLQKIIGVFALLVAVQLA 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R  P      + G V G+ S   G+GGG  T   + +    + +A ATS+  
Sbjct: 123 LEVKPKASRTVPGKVGLTLAGTVIGWASAIFGIGGGSLTVPFLTWRSVPMQQAVATSSAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA  + L  +  GW    LP  SLGFV + A+L I   S++      +L++ +  + 
Sbjct: 183 GLPIALASALSFMILGWHDPLLPAHSLGFVYLPALLGIALTSMVFARFGARLAHRLSPRL 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F+ ++F     F
Sbjct: 243 LKRLFAGLLFCVGINF 258



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 20/130 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +A  + G  S +FG+GGG + VP L+          S+ M  A+ TS     P ++ S
Sbjct: 139 LTLAGTVIGWASAIFGIGGGSLTVPFLTW--------RSVPMQQAVATSSACGLPIALAS 190

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G + +  L        +     + +   +    L + FA  
Sbjct: 191 ALSFMILGWHDPLLPAHSLGFVYLPALLGIALTSMVFARFGARLAHRLSPRLLKRLFAGL 250

Query: 134 CLLMGILMLK 143
              +GI  L 
Sbjct: 251 LFCVGINFLL 260



 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 36/128 (28%), Gaps = 20/128 (15%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY--------GASIYKATATSAGVSALIAFPAL 211
            + G   G L+G  GVGGGI    +++F             + A  TS       +  A+
Sbjct: 7   LLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDPQVLTHLAVGTSLATIIFTSVNAV 66

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
                             G V     + +    +L        +  I   +L     +  
Sbjct: 67  ------------REHHRRGAVRWPIFVWMTVGILLGAGFGALTAEAISGPHLQKIIGVFA 114

Query: 272 FTTSFVFA 279
              +   A
Sbjct: 115 LLVAVQLA 122


>gi|312963678|ref|ZP_07778159.1| protein of unknown function DUF81 [Pseudomonas fluorescens WH6]
 gi|311282187|gb|EFQ60787.1| protein of unknown function DUF81 [Pseudomonas fluorescens WH6]
          Length = 260

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 74/256 (28%), Positives = 120/256 (46%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L ++    +G L+GLFGVGGG+++VPVL  +F + G D  +  H+A+GTSL  I  TS
Sbjct: 3   FLLYLLLGACAGVLAGLFGVGGGIIIVPVLVFSFTVQGFDPQVLTHLAVGTSLATIIFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +  EH R G +   I       + I     +L    +    L K   +F L++ + + 
Sbjct: 63  INAVREHHRRGAVRWPIFVWMTVGILIGAGFGALTAEAISGPHLQKIIGVFALVVAVQLG 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R  P      + G V G+ S   G+GGG  T   + +    + +A ATS+  
Sbjct: 123 LDFKPKASRTVPGKVGLTLAGTVIGWASAIFGIGGGSLTVPFLTWRSVPMQQAVATSSAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA  + L  +  GW    LP  SLGFV + A+L I   S++      +L++ +  + 
Sbjct: 183 GLPIALASALSFMILGWHDPLLPAHSLGFVYLPALLGIALTSMVFARFGARLAHRLSPRL 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F+ ++F     F
Sbjct: 243 LKRLFAGLLFCVGINF 258



 Score = 49.3 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +A  + G  S +FG+GGG + VP L+          S+ M  A+ TS     P ++ S
Sbjct: 139 LTLAGTVIGWASAIFGIGGGSLTVPFLTW--------RSVPMQQAVATSSACGLPIALAS 190

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G + +  L        +     + +   +    L + FA  
Sbjct: 191 ALSFMILGWHDPLLPAHSLGFVYLPALLGIALTSMVFARFGARLAHRLSPRLLKRLFAGL 250

Query: 134 CLLMGILML 142
              +GI  L
Sbjct: 251 LFCVGINFL 259


>gi|149911651|ref|ZP_01900261.1| hypothetical protein PE36_07941 [Moritella sp. PE36]
 gi|149805275|gb|EDM65290.1| hypothetical protein PE36_07941 [Moritella sp. PE36]
          Length = 261

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 73/257 (28%), Positives = 121/257 (47%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + L +V    +G ++GLFGVGGGL++VP L  +F L  +   +   VA+GTSL  I  T
Sbjct: 2   IVVLYLVLGAAAGLIAGLFGVGGGLIIVPALVFSFSLQDLSPLVLTQVAIGTSLATIIFT 61

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   HR  G I+  ++K   F + I  V+ S+   ++    L     I+ L++ + M
Sbjct: 62  SMSSIKTHRSKGAIDWSLVKRLTFGIVIGAVLGSIFADYLPGETLQMIIGIYALIVAVQM 121

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
               +   E + P      + G V G +S   G+GGG  T   + +    +  A ATS+ 
Sbjct: 122 GLNLKPKAEHELPTGAGLSVAGGVIGAISALFGIGGGSLTVPYLSWCRVEMRNAVATSSA 181

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
               IA   +   + +GW    LP +SLG+V + A   I+  S +      KL++ +   
Sbjct: 182 CGLPIAVAGMCTYVITGWNNPELPEYSLGYVYLPAFFGIIITSTVFAKQGAKLAHSLPSH 241

Query: 262 YLTIGFSMIMFTTSFVF 278
            L   F++++      F
Sbjct: 242 ILKRYFALLLLGVGSKF 258



 Score = 43.1 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 20/130 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + VA  + G +S LFG+GGG + VP LS           + M  A+ TS     P +V  
Sbjct: 139 LSVAGGVIGAISALFGIGGGSLTVPYLSWC--------RVEMRNAVATSSACGLPIAVAG 190

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
              +               G + +      I    +     + +   +    L + FA+ 
Sbjct: 191 MCTYVITGWNNPELPEYSLGYVYLPAFFGIIITSTVFAKQGAKLAHSLPSHILKRYFALL 250

Query: 134 CLLMGILMLK 143
            L +G   + 
Sbjct: 251 LLGVGSKFIF 260


>gi|330806920|ref|YP_004351382.1| hypothetical protein PSEBR_a244 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375028|gb|AEA66378.1| Conserved hypothetical protein; putative membrane protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 260

 Score =  241 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 121/256 (47%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L ++    +G L+GLFGVGGG+++VPVL  +F L G D  +  H+A+GTSL  I  TS
Sbjct: 3   FVLYLLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDPQVLTHLAVGTSLASIIFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V +  EH+R G +   I       + I     ++    +    L K   +F L++ + + 
Sbjct: 63  VNAVREHQRKGAVRWPIFAWMTVGILIGAGFGAITAEAISGPHLQKIIGVFALIVAVQLA 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R  P      + G V G+ S   G+GGG  T   + +    + +A ATS+  
Sbjct: 123 LDFKPNASRSVPGKAGLTLAGTVIGWASAIFGIGGGSLTVPFLTWRSVPMQQAVATSSAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA  + L  +  GW    LP  SLGFV + A+L I   S++      +L++ +  + 
Sbjct: 183 GLPIAVVSALSFMILGWHDPLLPAHSLGFVYLPALLGIALTSMVFARFGARLAHRLSPRL 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F+ ++F     F
Sbjct: 243 LKRLFAALLFCVGLSF 258



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 20/130 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +A  + G  S +FG+GGG + VP L+          S+ M  A+ TS     P +V+S
Sbjct: 139 LTLAGTVIGWASAIFGIGGGSLTVPFLTW--------RSVPMQQAVATSSACGLPIAVVS 190

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G + +  L        +     + +   +    L + FA  
Sbjct: 191 ALSFMILGWHDPLLPAHSLGFVYLPALLGIALTSMVFARFGARLAHRLSPRLLKRLFAAL 250

Query: 134 CLLMGILMLK 143
              +G+  L 
Sbjct: 251 LFCVGLSFLF 260



 Score = 42.0 bits (98), Expect = 0.087,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 35/128 (27%), Gaps = 20/128 (15%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY--------GASIYKATATSAGVSALIAFPAL 211
            + G   G L+G  GVGGGI    +++F             + A  TS       +  A+
Sbjct: 7   LLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDPQVLTHLAVGTSLASIIFTSVNAV 66

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
                             G V       +    ++        +  I   +L     +  
Sbjct: 67  ------------REHQRKGAVRWPIFAWMTVGILIGAGFGAITAEAISGPHLQKIIGVFA 114

Query: 272 FTTSFVFA 279
              +   A
Sbjct: 115 LIVAVQLA 122


>gi|70733182|ref|YP_262955.1| hypothetical protein PFL_5897 [Pseudomonas fluorescens Pf-5]
 gi|68347481|gb|AAY95087.1| membrane protein, putative [Pseudomonas fluorescens Pf-5]
          Length = 260

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 77/256 (30%), Positives = 123/256 (48%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L ++    +G L+GLFGVGGG+++VPVL  +F L G D S+  H+A+GTSL  I  TS
Sbjct: 3   FLLYLLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDVSVLTHLAVGTSLASIIFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V +  EH R G +   I       + +     +L    +    L K   +F L++ + M 
Sbjct: 63  VNAVREHHRRGAVRWPIFAWMTVGILLGAGFGALTAEAISGPHLQKIIGVFALVVALQMT 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R+ P        G V G+ S   G+GGG  T   + +   ++ +A ATS+  
Sbjct: 123 LELKPKASRQVPGKLGLTAAGGVIGWASAIFGIGGGSLTVPFLTWRSVAMQQAVATSSAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA  + L  +  GW    LP  SLGFV + A+L I   S++   +  +L++ +  + 
Sbjct: 183 GLPIALASALSFMILGWHDPLLPAHSLGFVYLPALLGIALTSMVFARIGARLAHKLSPRL 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F+ ++F     F
Sbjct: 243 LKRMFAALLFCVGLSF 258



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 20/130 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +  A  + G  S +FG+GGG + VP L+          S+ M  A+ TS     P ++ S
Sbjct: 139 LTAAGGVIGWASAIFGIGGGSLTVPFLTW--------RSVAMQQAVATSSACGLPIALAS 190

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G + +  L        +   + + +   +    L + FA  
Sbjct: 191 ALSFMILGWHDPLLPAHSLGFVYLPALLGIALTSMVFARIGARLAHKLSPRLLKRMFAAL 250

Query: 134 CLLMGILMLK 143
              +G+  L 
Sbjct: 251 LFCVGLSFLF 260


>gi|325275837|ref|ZP_08141699.1| hypothetical protein G1E_20656 [Pseudomonas sp. TJI-51]
 gi|324099033|gb|EGB97017.1| hypothetical protein G1E_20656 [Pseudomonas sp. TJI-51]
          Length = 260

 Score =  238 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 76/256 (29%), Positives = 120/256 (46%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L ++    +G L+GLFGVGGG+++VPVL  +F L G D S+  H+A+GTSL  I  TS
Sbjct: 3   FVLYLLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLATIVFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + +EH R G +   I       + +   V +   S +    L K   +F L++   M 
Sbjct: 63  INAVLEHHRKGAVQWPIFAWMTLGILLGAGVGAKTASLIQGPLLQKIIGVFALVIAAQMA 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +       P   V    G V G+ S   G+GGG  T   +      + +A ATS+  
Sbjct: 123 LDLKPKASHGVPGKPVLVGAGGVIGWASAIFGIGGGSLTVPFLTSRSLPMQQAVATSSAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA  + L  +  GW    LPP SLG+V + A++ I   S+       +L++ +  + 
Sbjct: 183 GLPIAMASALSFMLLGWHEQHLPPHSLGYVYLPALVGIAVTSMFFARFGARLAHKLSPRL 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F+ ++F     F
Sbjct: 243 LKRLFAAVLFCVGLSF 258



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 38/128 (29%), Gaps = 20/128 (15%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY--------GASIYKATATSAGVSALIAFPAL 211
            + G   G L+G  GVGGGI    +++F             + A  TS       +  A+
Sbjct: 7   LLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLATIVFTSINAV 66

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
                       L     G V       +    +L   +  K + +I    L     +  
Sbjct: 67  ------------LEHHRKGAVQWPIFAWMTLGILLGAGVGAKTASLIQGPLLQKIIGVFA 114

Query: 272 FTTSFVFA 279
              +   A
Sbjct: 115 LVIAAQMA 122



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 20/130 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++ A  + G  S +FG+GGG + VP L+          S+ M  A+ TS     P ++ 
Sbjct: 138 VLVGAGGVIGWASAIFGIGGGSLTVPFLT--------SRSLPMQQAVATSSACGLPIAMA 189

Query: 85  SFMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           S +                 G + +  L              + +   +    L + FA 
Sbjct: 190 SALSFMLLGWHEQHLPPHSLGYVYLPALVGIAVTSMFFARFGARLAHKLSPRLLKRLFAA 249

Query: 133 FCLLMGILML 142
               +G+  L
Sbjct: 250 VLFCVGLSFL 259


>gi|53802665|ref|YP_112564.1| hypothetical protein MCA0023 [Methylococcus capsulatus str. Bath]
 gi|53756426|gb|AAU90717.1| putative membrane protein [Methylococcus capsulatus str. Bath]
          Length = 294

 Score =  238 bits (608), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 1/261 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +   +   +    L+G  SGLFG+GGG ++VP L   F   G+ +SI M +A+ TSL  I
Sbjct: 1   MYTTLTFYLAFGALAGVASGLFGIGGGAIIVPFLVWLFPGQGVPESILMIMAVATSLATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TSV S   H R G +   ++   +  + + TV  S++  H+      + FA+F +L+ 
Sbjct: 61  VVTSVASVRAHHRRGAVVWPLVWRLVPGIALGTVAGSIVADHLPTRQFERLFAVFLMLVA 120

Query: 139 ILMLKRDRLYCERKFPDNYV-KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           + + +  R     + P         G++ G LS   G+GGG  T   +L    +I  A A
Sbjct: 121 VQVYRGRREETAGEKPVPPGVMTGGGIMIGLLSALFGIGGGSITVPFLLRCRQNIRHAVA 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            S+     IA    L  +  GWG   LP  SLG++   A L I   S+L  P    L++ 
Sbjct: 181 VSSACGFPIAVVGTLSYVVLGWGHPSLPAHSLGYIYWPAFLGIGAASVLTAPYGAALAHR 240

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +  + L   F+ ++F      
Sbjct: 241 LPMRGLKRLFAAVLFLLGARM 261



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 4/125 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++     + G LS LFG+GGG + VP L +        + +  +    +A+  +L  +  
Sbjct: 141 VMTGGGIMIGLLSALFGIGGGSITVPFLLRCRQNIRHAVAVSSACGFPIAVVGTLSYVVL 200

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                 +     G I             +T    + +   +    L + FA    L+G  
Sbjct: 201 GWGHPSLPAHSLGYIYWPAFLGIGAASVLTAPYGAALAHRLPMRGLKRLFAAVLFLLGAR 260

Query: 141 MLKRD 145
           ML R 
Sbjct: 261 MLARS 265


>gi|313200277|ref|YP_004038935.1| hypothetical protein MPQ_0517 [Methylovorus sp. MP688]
 gi|312439593|gb|ADQ83699.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 263

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 74/247 (29%), Positives = 127/247 (51%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
               + A   +G LSGLFG+GGG+V+V +L+  F  +G  +S  MH+A+GTSL  I  TS
Sbjct: 3   FLYYLAAGAATGVLSGLFGIGGGVVIVSILAYLFAGLGFPESHIMHIALGTSLASIVFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H R   ++  +++     + + T++ SL+++ +    L   FA+F   +   ML
Sbjct: 63  LSSARAHHRKDNVDFALVRQLAPTIVLGTLLGSLIVAQIHSHALQAIFAVFLTAVACQML 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            +       + P  ++  + G+V GF+S  +G+GGG  +   + +    + +A  TSA +
Sbjct: 123 FKLSPNQASRVPGRWLNGVMGVVIGFISSLVGIGGGTVSVPYLHYCNVPLKRAIGTSAAI 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA    +  IY+GW + GLP  SLGF+ + A+  I   SI+  P    L++ +    
Sbjct: 183 GLPIALAGTIGYIYTGWSVPGLPANSLGFIYLPALAGIALASIITAPWGAALAHRLPTPI 242

Query: 263 LTIGFSM 269
           L   F+ 
Sbjct: 243 LRRLFAC 249


>gi|317052314|ref|YP_004113430.1| hypothetical protein Selin_2154 [Desulfurispirillum indicum S5]
 gi|316947398|gb|ADU66874.1| protein of unknown function DUF81 [Desulfurispirillum indicum S5]
          Length = 267

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 115/230 (50%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L   F   GI     MH+A+GTSL  I  TS+ SF+ H R G ++  I++  +  + +
Sbjct: 33  PLLVWCFLRQGIQPDHIMHLALGTSLASIIFTSISSFLSHHRRGAVDWTIVRRIVPGILV 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T + +++ S +  +FL   F +F   +   ++   +    R+ P N   +  G   G +
Sbjct: 93  GTFLGTMVASQLSSNFLKGFFCLFLYTIATQIILNKKPKASRQLPGNAGMFATGSTIGAV 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   ML+   + ++A  TSA +   IA    +  I +   + GLP +S+
Sbjct: 153 SSFVGIGGGSLSVPFMLWCNVTAHRAIGTSAAIGLPIAVAGAIGYIVNNLQVTGLPAYSI 212

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           G+V + A+  I+  S+L  PL  +L++ +    L   F++ ++  +   A
Sbjct: 213 GYVYLPALAGIVCASVLTAPLGARLAHSLPVDRLKRFFAIFLYVVATRMA 262


>gi|167036183|ref|YP_001671414.1| hypothetical protein PputGB1_5196 [Pseudomonas putida GB-1]
 gi|166862671|gb|ABZ01079.1| protein of unknown function DUF81 [Pseudomonas putida GB-1]
          Length = 260

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 120/256 (46%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L ++    +G L+GLFGVGGG+++VPVL  +F L G D S+  H+A+GTSL  I  TS
Sbjct: 3   FVLYLLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLATIVFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + +EH R G +   I       + +   V +   S +    L K   +F L++   M 
Sbjct: 63  INAVLEHHRKGAVQWPIFAWMTLGILLGAGVGAKTASLIQGPLLQKIIGVFALVIAAQMA 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R  P        G V G+ S   G+GGG  T   + +    + +A ATS+  
Sbjct: 123 LGLKPKASRGIPGKPALVGAGGVIGWASAIFGIGGGSLTVPFLTWRSLPMQQAVATSSAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA  + L  +  GW    LP  SLG+V + A++ I   S+       +L++ +  + 
Sbjct: 183 GLPIALASALSFMLLGWHEEHLPAHSLGYVYLPAMIGIAVTSMFFARFGARLAHKLSPRL 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F+ ++F     F
Sbjct: 243 LKRLFAALLFCVGLSF 258



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 4/120 (3%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            + G   G L+G  GVGGGI    +++ +  ++       A V   +A    L  I    
Sbjct: 7   LLLGACAGVLAGLFGVGGGIIIVPVLV-FSFTLQ---GFDASVLTHLAVGTSLATIVFTS 62

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
               L     G V       +    +L   +  K + +I    L     +     +   A
Sbjct: 63  INAVLEHHRKGAVQWPIFAWMTLGILLGAGVGAKTASLIQGPLLQKIIGVFALVIAAQMA 122



 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++ A  + G  S +FG+GGG + VP L+          S+ M  A+ TS     P ++ S
Sbjct: 139 LVGAGGVIGWASAIFGIGGGSLTVPFLTW--------RSLPMQQAVATSSACGLPIALAS 190

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G + +  +              + +   +    L + FA  
Sbjct: 191 ALSFMLLGWHEEHLPAHSLGYVYLPAMIGIAVTSMFFARFGARLAHKLSPRLLKRLFAAL 250

Query: 134 CLLMGILML 142
              +G+  L
Sbjct: 251 LFCVGLSFL 259


>gi|170719509|ref|YP_001747197.1| hypothetical protein PputW619_0322 [Pseudomonas putida W619]
 gi|169757512|gb|ACA70828.1| protein of unknown function DUF81 [Pseudomonas putida W619]
          Length = 260

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 122/256 (47%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L ++    +G L+GLFGVGGG+++VPVL  +F L G D S+  H+A+GTSL  I  TS
Sbjct: 3   FALYLLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLATIVFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + +EH R G +   I       + +   V +   S +    L K   +F L++   M 
Sbjct: 63  INAVLEHHRRGAVQWPIFAWMTVGILLGAGVGAKTASLIQGPLLQKIIGVFALIIAAQMA 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R  P        G V G+ S   G+GGG  T   + +    + +A ATS+  
Sbjct: 123 LDLKPKASRGIPGKPALIGAGGVIGWASAIFGIGGGSLTVPFLTWRSLPMQQAVATSSAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA  + L  ++ GW    LP  S+GFV + A++ I   S+       +L++ +  + 
Sbjct: 183 GLPIAVASALSFMWLGWHDEHLPAHSVGFVYLPALVGIAVTSMFFARFGARLAHKLSPRL 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F+ ++F+    F
Sbjct: 243 LKRLFAALLFSVGLSF 258



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 39/131 (29%), Gaps = 20/131 (15%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY--------GASIYKATATSAGVSALIAF 208
            +  + G   G L+G  GVGGGI    +++F             + A  TS       + 
Sbjct: 4   ALYLLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLATIVFTSI 63

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            A+            L     G V       +    +L   +  K + +I    L     
Sbjct: 64  NAV------------LEHHRRGAVQWPIFAWMTVGILLGAGVGAKTASLIQGPLLQKIIG 111

Query: 269 MIMFTTSFVFA 279
           +     +   A
Sbjct: 112 VFALIIAAQMA 122



 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 45/129 (34%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I A  + G  S +FG+GGG + VP L+          S+ M  A+ TS     P +V S
Sbjct: 139 LIGAGGVIGWASAIFGIGGGSLTVPFLTW--------RSLPMQQAVATSSACGLPIAVAS 190

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G + +  L              + +   +    L + FA  
Sbjct: 191 ALSFMWLGWHDEHLPAHSVGFVYLPALVGIAVTSMFFARFGARLAHKLSPRLLKRLFAAL 250

Query: 134 CLLMGILML 142
              +G+  L
Sbjct: 251 LFSVGLSFL 259


>gi|253998207|ref|YP_003050270.1| hypothetical protein Msip34_0495 [Methylovorus sp. SIP3-4]
 gi|253984886|gb|ACT49743.1| protein of unknown function DUF81 [Methylovorus sp. SIP3-4]
          Length = 263

 Score =  237 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 74/247 (29%), Positives = 128/247 (51%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
               + A   +G LSGLFG+GGG+V+V +L+  F  +G  +S  MH+A+GTSL  I  TS
Sbjct: 3   FLYYLAAGAATGVLSGLFGIGGGVVIVSILAYLFAGLGFPESHIMHIALGTSLASIVFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H R   ++  +++     + + T++ SL+++ +    L   FA+F   +   ML
Sbjct: 63  LSSARAHHRKDNVDFPLVRQLAPTIVLGTLLGSLIVAQIHSHALQAIFAVFLTAVACQML 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            +       + P  ++  + G+V GF+S  +G+GGG  +   + ++   + +A  TSA +
Sbjct: 123 FKLSPNQASRVPGRWLNGVMGVVIGFISSLVGIGGGTVSVPYLHYFNVPLKRAIGTSAAI 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA    +  IY+GW + GLP  SLGF+ + A+  I   SI+  P    L++ +    
Sbjct: 183 GLPIALAGTIGYIYTGWSVPGLPANSLGFIYLPALAGIALASIITAPWGAALAHRLPTPI 242

Query: 263 LTIGFSM 269
           L   F+ 
Sbjct: 243 LRRLFAC 249


>gi|78222746|ref|YP_384493.1| hypothetical protein Gmet_1534 [Geobacter metallireducens GS-15]
 gi|78194001|gb|ABB31768.1| protein of unknown function DUF81 [Geobacter metallireducens GS-15]
          Length = 263

 Score =  237 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 125/255 (49%), Gaps = 1/255 (0%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              I     +G  +GLFGVGGGL++VP+L+  F    + +   +H+A+GTSL  I  TS+
Sbjct: 5   LTYITIGTFAGLSAGLFGVGGGLIIVPILTFMFTAQHLPEEHILHLALGTSLACIMFTSI 64

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S   H RHG ++  +++   F +   T   S + + +   FL   F +F   +   ML 
Sbjct: 65  SSLRAHHRHGAVDWAVVRRISFGIIAGTYTGSWVAAQLSTRFLKGFFVLFLYYIATRMLL 124

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             +    R+ P     +  G + G +S  +G+GGG  +   +++   + ++A  TSA + 
Sbjct: 125 DIKPKPHRQLPGRTALFGVGGLIGCVSSLVGIGGGSMSVPFLVWCNVAFHRAIGTSAAIG 184

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
             IA    +  + +G  +  LPP S GFV + A+  I+  SI+  PL  KL++ +    L
Sbjct: 185 FPIALAGAVGYVINGLQVP-LPPHSFGFVYLPALFGIVVASIVTAPLGAKLAHNLPIYKL 243

Query: 264 TIGFSMIMFTTSFVF 278
            + FS+++       
Sbjct: 244 RLVFSLLVIVMGTKM 258



 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 19/132 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +     L G +S L G+GGG + VP L           ++  H A+GTS  +  P ++
Sbjct: 138 TALFGVGGLIGCVSSLVGIGGGSMSVPFLVWC--------NVAFHRAIGTSAAIGFPIAL 189

Query: 84  MSFMEH-----------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
              + +              G + +  L   +    +T  + + +  ++    L   F++
Sbjct: 190 AGAVGYVINGLQVPLPPHSFGFVYLPALFGIVVASIVTAPLGAKLAHNLPIYKLRLVFSL 249

Query: 133 FCLLMGILMLKR 144
             ++MG  ML  
Sbjct: 250 LVIVMGTKMLLS 261



 Score = 40.8 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 42/134 (31%), Gaps = 20/134 (14%)

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS--------IYKATATSAGVSA 204
            P        G   G  +G  GVGGG+    ++ F   +        ++ A  TS     
Sbjct: 1   MPMWLTYITIGTFAGLSAGLFGVGGGLIIVPILTFMFTAQHLPEEHILHLALGTSLACIM 60

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
             +  +L                  G V+   V  I    I  T   + ++  +  ++L 
Sbjct: 61  FTSISSL------------RAHHRHGAVDWAVVRRISFGIIAGTYTGSWVAAQLSTRFLK 108

Query: 265 IGFSMIMFTTSFVF 278
             F + ++  +   
Sbjct: 109 GFFVLFLYYIATRM 122


>gi|149377243|ref|ZP_01894990.1| predicted Permease [Marinobacter algicola DG893]
 gi|149358431|gb|EDM46906.1| predicted Permease [Marinobacter algicola DG893]
          Length = 264

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 122/261 (46%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +   + L +V   L+GT++GLFG+GGGLV+VPVL  +F L G+   I  H+A+GTSL  
Sbjct: 2   TLFAVVGLYLVLGALAGTMAGLFGIGGGLVIVPVLIFSFDLQGVSGDIAAHLAVGTSLAT 61

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I  TS+ S   H  HG +  +I +     + +  V+ +   S +    L     +F +L+
Sbjct: 62  IVFTSISSIRSHHLHGAVRWEIFRPMTAGIVLGAVLGAWTASMLSGEALELVIGVFVILV 121

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            + ML        R  P +      G   G+ S   G+GGG  T   + +    + +A  
Sbjct: 122 ALKMLFGANPKPGRDVPGSVGLGSAGASIGWASAIFGIGGGTLTVPFLSWCNVRMQQAVG 181

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TSA     IA    L  I +GW    LP  S+GF+ + A + I+  S+L   +   L++ 
Sbjct: 182 TSAACGLPIAVAGALANIATGWQNPELPELSIGFIYLPAFVGIVLTSVLFARVGANLAHR 241

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +    L   F++ +      F
Sbjct: 242 LDAALLKKIFAIFLIVVGIRF 262



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 20/127 (15%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A    G  S +FG+GGG + VP LS          ++ M  A+GTS     P +V   + 
Sbjct: 146 AGASIGWASAIFGIGGGTLTVPFLSWC--------NVRMQQAVGTSAACGLPIAVAGALA 197

Query: 89  HRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           +   G             I +      +    +   V + +   +D + L K FAIF ++
Sbjct: 198 NIATGWQNPELPELSIGFIYLPAFVGIVLTSVLFARVGANLAHRLDAALLKKIFAIFLIV 257

Query: 137 MGILMLK 143
           +GI  L 
Sbjct: 258 VGIRFLL 264


>gi|94501824|ref|ZP_01308336.1| predicted Permease [Oceanobacter sp. RED65]
 gi|94426045|gb|EAT11041.1| predicted Permease [Oceanobacter sp. RED65]
          Length = 263

 Score =  235 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 66/257 (25%), Positives = 117/257 (45%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +   +    ++G ++GLFG+GGG+++VPVL   F+++    +   H+A+ TSL  I  T
Sbjct: 2   LLVTYLAVGAVAGLMAGLFGIGGGMIIVPVLVITFEILEFSPATLTHMAVATSLASIVFT 61

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H +   ++  I+      + +  V+  L    +  S L     +  LLM   M
Sbjct: 62  SISSVRTHHQKQAVDWPIVYKLSVGILLGAVLGVLSADALSGSGLQIVIGVSALLMAAQM 121

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
               +    R  P        G   G+ S   G+GGG  T   + +    + ++ AT+A 
Sbjct: 122 GLGLKPKPTRSLPATTGMVTAGTGIGWASALFGIGGGSLTVPFLTWCNHPMQRSVATAAA 181

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
               IA    L  ++ GWG   LP  ++G+V   A+L I+  SI    L  KL++ +  +
Sbjct: 182 CGFPIALVGALTNVFVGWGNEALPQNAVGYVYWPALLGIVITSIPCARLGAKLAHRLSAE 241

Query: 262 YLTIGFSMIMFTTSFVF 278
            L   F++++   +  F
Sbjct: 242 KLKRLFAILLVLVAIKF 258



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++ A    G  S LFG+GGG + VP L+          +  M  ++ T+     P +++ 
Sbjct: 139 MVTAGTGIGWASALFGIGGGSLTVPFLTWC--------NHPMQRSVATAAACGFPIALVG 190

Query: 86  FME------------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G +    L   +        + + +   +    L + FAI 
Sbjct: 191 ALTNVFVGWGNEALPQNAVGYVYWPALLGIVITSIPCARLGAKLAHRLSAEKLKRLFAIL 250

Query: 134 CLLMGILML 142
            +L+ I  L
Sbjct: 251 LVLVAIKFL 259


>gi|320354019|ref|YP_004195358.1| hypothetical protein Despr_1919 [Desulfobulbus propionicus DSM
           2032]
 gi|320122521|gb|ADW18067.1| protein of unknown function DUF81 [Desulfobulbus propionicus DSM
           2032]
          Length = 267

 Score =  235 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 74/259 (28%), Positives = 129/259 (49%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + + +V   ++G L+GL GVGGG+V+VP+L   F   G+     MH+A+GTSL  I 
Sbjct: 3   IEIVLMYLVVGLIAGVLAGLLGVGGGVVIVPMLVFCFAKQGVQPDQIMHLALGTSLASII 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ SFM H R G +   I++  +  + I T + + + + +   FL   F +F   +  
Sbjct: 63  FTSISSFMSHHRRGAVEWTIVRRIVPGILIGTFLGTFIAARLSTGFLKTFFCVFLYCVAT 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            ML   +    R+ P     +  G   G +S  +G+GGG  +   M++     + A  TS
Sbjct: 123 QMLLNKKPKASRELPQTAGMFGVGSTIGVVSALVGIGGGSLSVPFMIWCNVPAHLAVGTS 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A +   IA       + +    +GLP +SLG+V + A++ I+  SI   PL  KL++ + 
Sbjct: 183 AAIGFPIAIAGAFGFMVNNLHGSGLPAYSLGYVYLPALIGIVCTSIFTAPLGAKLAHALP 242

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              L   F++ ++  +   
Sbjct: 243 VDKLKRLFALFLYAVATRM 261


>gi|255067942|ref|ZP_05319797.1| putative membrane protein [Neisseria sicca ATCC 29256]
 gi|255047824|gb|EET43288.1| putative membrane protein [Neisseria sicca ATCC 29256]
          Length = 269

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 1/260 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGID-DSICMHVAMGTSLGVIA 79
           D I  ++     +G ++GLFGVGGG ++VPV+    QL GI       H+A+GTS  V+ 
Sbjct: 5   DIILSLLAVGSAAGFIAGLFGVGGGTLIVPVVLWTLQLQGISSHPYAQHLAIGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S     +   I+ + ++     +    ++ ++   ++    L   F +F  L+ +
Sbjct: 65  FTTFSSMYAQHKKSAIDWQTVRRMTPSMIFGVLIGAVTAKYIPTRALQIFFIVFLTLIAL 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   +    R  P        G + G  S  +G+GGG  +   +++     ++A  TS
Sbjct: 125 KTLTDSKPKASRHLPALPGLSAVGTLFGAASSWVGIGGGSLSVPFLMYCNFPAHRAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +GW +  LP  S GF+ + AV I+   +++  PL  K ++ + 
Sbjct: 185 SGLAWPIALAGTIGYLITGWNIPNLPHGSGGFLYLPAVAILSIATMIFAPLGVKTAHKLP 244

Query: 260 KKYLTIGFSMIMFTTSFVFA 279
            + L I F +++   +F  A
Sbjct: 245 ARQLKISFGIMLLLITFKMA 264


>gi|261365443|ref|ZP_05978326.1| putative membrane protein [Neisseria mucosa ATCC 25996]
 gi|288566111|gb|EFC87671.1| putative membrane protein [Neisseria mucosa ATCC 25996]
          Length = 269

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 64/260 (24%), Positives = 122/260 (46%), Gaps = 1/260 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGID-DSICMHVAMGTSLGVIA 79
           D I  ++     +G ++GLFGVGGG ++VPV+    QL GI+      H+A+GTS  V+ 
Sbjct: 5   DIIFSLLAVGSAAGFIAGLFGVGGGTLIVPVVLWTLQLQGINGHPYAQHLAIGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S     +   I+ + ++     +    ++ ++   ++    L   F  F  L+ +
Sbjct: 65  FTTFSSMYAQHKKRAIDWQTVRRMTPSMIFGVLIGAVTAKYMPTRALQIFFIAFLTLIAL 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   +    R  P        G + G  S  +G+GGG  +   +++     ++A  TS
Sbjct: 125 KTLADSKPKASRHLPALPGLSAVGTLFGAASSWVGIGGGSLSVPFLMYCNFPAHRAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +GW +  LP  S GF+ + AV I+   +++  PL  K ++ + 
Sbjct: 185 SGLAWPIALAGTIGYLVTGWNIPNLPHGSGGFLYLPAVAILSIATMIFAPLGVKTAHKLP 244

Query: 260 KKYLTIGFSMIMFTTSFVFA 279
            + L I F +++   +   A
Sbjct: 245 ARQLKISFGIMLLLIAIKMA 264


>gi|93005732|ref|YP_580169.1| hypothetical protein Pcryo_0904 [Psychrobacter cryohalolentis K5]
 gi|92393410|gb|ABE74685.1| protein of unknown function DUF81 [Psychrobacter cryohalolentis K5]
          Length = 298

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 10/266 (3%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   L+G  +GLFGVGGG ++VP+L   F  M       MH+A+GTSL  I  TS
Sbjct: 27  LIIFLIIGALAGFAAGLFGVGGGTIIVPLLFIVFTQMDYSPDSIMHLALGTSLATIIVTS 86

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S M H + G +   + K+    L I   + + +   +   +L     +F L +   M 
Sbjct: 87  ISSLMAHNKKGAVMWPVFKNLAPGLAIGCFLGAGIAGQISGLYLQLIVGVFLLWVAYKMF 146

Query: 143 KRDRLY----------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
              +               + P    +   G V G  S   G+GGG  T   +  YG  +
Sbjct: 147 FAGKKQVVSHADDVNGANTELPSKPKQLAAGGVIGIASAIFGIGGGSLTVPYLTRYGVVM 206

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            KA  TSA     IA    L  ++ G       P ++GFV+I A L I  +S     L  
Sbjct: 207 QKAVGTSAACGLPIAIAGALGFMFFGMQQQVDVPNTIGFVHIYAFLGISIMSFFTAKLGA 266

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVF 278
           K+++++  + L   F++++      F
Sbjct: 267 KVAHILSPELLKKCFAVLLTVVGCYF 292



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + A  + G  S +FG+GGG + VP L++          + M  A+GTS     P ++   
Sbjct: 174 LAAGGVIGIASAIFGIGGGSLTVPYLTRY--------GVVMQKAVGTSAACGLPIAIAGA 225

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G +++        +   T  + + +   +    L K FA+  
Sbjct: 226 LGFMFFGMQQQVDVPNTIGFVHIYAFLGISIMSFFTAKLGAKVAHILSPELLKKCFAVLL 285

Query: 135 LLMGILMLKR 144
            ++G   L +
Sbjct: 286 TVVGCYFLFK 295


>gi|78355798|ref|YP_387247.1| hypothetical protein Dde_0751 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218203|gb|ABB37552.1| membrane protein, putative [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 265

 Score =  232 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 130/260 (50%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +++ + L I    ++G L+GL G+GGGLV+VP+L+ +F    +     +H+A+GTSL  I
Sbjct: 1   MIESLALYIALGSVAGVLAGLLGIGGGLVIVPMLTFSFTWQNVPHEHMLHLALGTSLATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TSV SF  H R G +N   +K     + + T   + + S +  +FL   F IF   + 
Sbjct: 61  IFTSVSSFRAHNRRGAVNWAAVKAVTPGILVGTFAGAFVASALSTNFLKGFFGIFLYYVA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           + ML   +    R+ P        G   G LS  +G+GGG  +   + +    I+ A  T
Sbjct: 121 VQMLLNIKPKPTRQLPGAPGMVAAGGGIGVLSSLVGIGGGTLSVPFLTWCNTPIHTAIGT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           ++ +   +A    L  + SGWG   LP +S+G+V + A++ I+  S+L  P+  +L++ +
Sbjct: 181 ASAIGLPLAISGSLGYVLSGWGQPTLPQYSVGYVYLPAMIGIVSASMLTAPVGVRLAHSL 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++++       
Sbjct: 241 PVPRLKRIFAVLLLAVGTKM 260



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++ A    G LS L G+GGG + VP L+          +  +H A+GT+  +  P ++  
Sbjct: 141 MVAAGGGIGVLSSLVGIGGGTLSVPFLTWC--------NTPIHTAIGTASAIGLPLAISG 192

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G + +  +   +    +T  V   +   +    L + FA+ 
Sbjct: 193 SLGYVLSGWGQPTLPQYSVGYVYLPAMIGIVSASMLTAPVGVRLAHSLPVPRLKRIFAVL 252

Query: 134 CLLMGILMLKR 144
            L +G  ML  
Sbjct: 253 LLAVGTKMLLS 263


>gi|126665227|ref|ZP_01736210.1| hypothetical protein MELB17_19204 [Marinobacter sp. ELB17]
 gi|126630597|gb|EBA01212.1| hypothetical protein MELB17_19204 [Marinobacter sp. ELB17]
          Length = 265

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 74/257 (28%), Positives = 120/257 (46%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              L +    L+G+L+GLFG+GGGLV+VPVL  +F   G    I  H+A+GTSL  I  T
Sbjct: 6   LFSLYLALGALAGSLAGLFGIGGGLVIVPVLIFSFGAQGFSPDIAAHMAVGTSLATIVFT 65

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H  HG I   I +     +    ++ +   S +    L     +F +++ + M
Sbjct: 66  SLSSIRSHHVHGAIRWDIFRAMTIGIVFGALIGAWTASLLSGPALELIIGVFVIVVAVKM 125

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L        R  P N      G+V G++S   G+GGG  T   +      +  A   SA 
Sbjct: 126 LLGFDPKPSRSVPGNTGLRAAGVVIGWVSAIFGIGGGTLTVPYLSRCNIKMQHAIGISAA 185

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
               IA    L  +++GWG   LP +SLGF+ + A++ ++  S+L   +   L++ +   
Sbjct: 186 CGLPIALAGALGNLWTGWGDPQLPAYSLGFIYLPALVGVILTSVLFARVGANLAHRLNAP 245

Query: 262 YLTIGFSMIMFTTSFVF 278
            L   F++++      F
Sbjct: 246 LLRRIFAIMLVLIGLRF 262



 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +  A  + G +S +FG+GGG + VP LS+         +I M  A+G S     P ++  
Sbjct: 143 LRAAGVVIGWVSAIFGIGGGTLTVPYLSRC--------NIKMQHAIGISAACGLPIALAG 194

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G I +  L   I    +   V + +   ++   L + FAI 
Sbjct: 195 ALGNLWTGWGDPQLPAYSLGFIYLPALVGVILTSVLFARVGANLAHRLNAPLLRRIFAIM 254

Query: 134 CLLMGILMLKR 144
            +L+G+  L  
Sbjct: 255 LVLIGLRFLLS 265


>gi|146280807|ref|YP_001170960.1| hypothetical protein PST_0412 [Pseudomonas stutzeri A1501]
 gi|145569012|gb|ABP78118.1| putative membrane protein [Pseudomonas stutzeri A1501]
          Length = 303

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 76/233 (32%), Positives = 112/233 (48%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
              +G L+GLFGVGGGL++VPVL  +F   G    I  H+A+GTSL  I  TSV S + H
Sbjct: 53  GGFAGVLAGLFGVGGGLIIVPVLVFSFSAQGFSQDILTHLAVGTSLATIVFTSVNSILTH 112

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
            R G +   ++    F + +   + SL  + +    L K   +F L M + M    R   
Sbjct: 113 HRLGAVRWPMVLWMTFGILLGAALGSLTAAAIQGPMLQKIIGVFALAMAVQMGFDLRPKA 172

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
             + P      + G+V G+ S   G+GGG  +   + +    + +A ATSA     IA  
Sbjct: 173 TGRVPGRPELSLVGVVIGWASAIFGIGGGSLSVPYLTWRSVPMQQAVATSAACGLPIAVA 232

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
             L  +  GW    LP WSLGFV + A+L I   S+    L  +L++ +  K 
Sbjct: 233 GALSFMAVGWHEAHLPQWSLGFVYLPALLGIAATSMFFARLGARLAHRLSAKV 285



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +   + G  S +FG+GGG + VP L+          S+ M  A+ TS     P +V  
Sbjct: 182 LSLVGVVIGWASAIFGIGGGSLSVPYLTW--------RSVPMQQAVATSAACGLPIAVAG 233

Query: 86  FME------------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G + +  L            + + +   +    L + FA+ 
Sbjct: 234 ALSFMAVGWHEAHLPQWSLGFVYLPALLGIAATSMFFARLGARLAHRLSAKVLKRLFALL 293

Query: 134 CLLMGILML 142
            L +GI  L
Sbjct: 294 LLSVGINFL 302


>gi|328951784|ref|YP_004369118.1| protein of unknown function DUF81 [Desulfobacca acetoxidans DSM
           11109]
 gi|328452108|gb|AEB07937.1| protein of unknown function DUF81 [Desulfobacca acetoxidans DSM
           11109]
          Length = 265

 Score =  231 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 61/233 (26%), Positives = 114/233 (48%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           LV+VP+L       G+ +   MH+A+ TS+  I  TSV SF  H R G ++  +++    
Sbjct: 28  LVIVPMLVFTLTWQGVPNEYIMHLALATSMASIIFTSVSSFSAHHRRGAVHWLVVRRIAL 87

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
            + + T + + + S +  ++L   F +F   M   ++   +    R  P     +  G  
Sbjct: 88  GIVLGTFLGACLASRLSTAYLKGVFVVFLYYMAYQLIADRKPKPSRTLPGRLGMFAVGNG 147

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            G +S  +G+GGG  +   ML+   ++++A  TSA +   IA    +  I +GW + GLP
Sbjct: 148 IGVVSALVGIGGGTLSVPFMLWCNLTVHEAIGTSAAIGFPIAIAGTIGYIVNGWQVAGLP 207

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +S G+V + A++ I+  S+L  PL  +L++ +    L   F++++       
Sbjct: 208 DYSWGYVYLPALVGIVAASVLTAPLGVRLAHSLPVDKLKRVFAILLALVGTRM 260



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +       G +S L G+GGG + VP +           ++ +H A+GTS  +  P ++  
Sbjct: 141 MFAVGNGIGVVSALVGIGGGTLSVPFMLWC--------NLTVHEAIGTSAAIGFPIAIAG 192

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G + +  L   +    +T  +   +   +    L + FAI 
Sbjct: 193 TIGYIVNGWQVAGLPDYSWGYVYLPALVGIVAASVLTAPLGVRLAHSLPVDKLKRVFAIL 252

Query: 134 CLLMGILML 142
             L+G  ML
Sbjct: 253 LALVGTRML 261


>gi|120555345|ref|YP_959696.1| hypothetical protein Maqu_2434 [Marinobacter aquaeolei VT8]
 gi|120325194|gb|ABM19509.1| protein of unknown function DUF81 [Marinobacter aquaeolei VT8]
          Length = 265

 Score =  231 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 74/261 (28%), Positives = 128/261 (49%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++  I L ++   L+GT++GLFG+GGGLV+VPVL  +F L GI   I  H+A+GTSL  
Sbjct: 2   SMIGIIVLYLLLGALAGTMAGLFGIGGGLVIVPVLIFSFGLQGISPEIAAHLAVGTSLAT 61

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I  TS+ S   H +HG +   + +   F + +  V+ +   + +    L     +F +L+
Sbjct: 62  IVFTSISSIRTHHQHGAVRWDLFRPMTFGIVVGAVLGAWTAAMLSGPVLETIIGVFVILV 121

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            + M+        R  P        G + G+ S   G+GGG  T   + +    + +A A
Sbjct: 122 ALKMILEVNPKPGRDVPGTTGLGAAGGIIGWASAIFGIGGGTLTVPYLSWCNVKMQQAVA 181

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TSA     IA    L  +++GW    LP  SLGF+ + A++ ++  S+    +   L++ 
Sbjct: 182 TSAACGFPIAIAGALANVWTGWQDPDLPELSLGFIYLPALVGVVATSVFFARIGAGLAHR 241

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +  + L   F++++      F
Sbjct: 242 LDGRLLKRIFAIMLVLVGLRF 262



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 46/121 (38%), Gaps = 20/121 (16%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH------ 89
            S +FG+GGG + VP LS          ++ M  A+ TS     P ++   + +      
Sbjct: 153 ASAIFGIGGGTLTVPYLSWC--------NVKMQQAVATSAACGFPIAIAGALANVWTGWQ 204

Query: 90  ------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G I +  L   +        + + +   +D   L + FAI  +L+G+  L 
Sbjct: 205 DPDLPELSLGFIYLPALVGVVATSVFFARIGAGLAHRLDGRLLKRIFAIMLVLVGLRFLL 264

Query: 144 R 144
            
Sbjct: 265 S 265


>gi|226953500|ref|ZP_03823964.1| transmembrane protein [Acinetobacter sp. ATCC 27244]
 gi|226835785|gb|EEH68168.1| transmembrane protein [Acinetobacter sp. ATCC 27244]
          Length = 266

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 2/258 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS
Sbjct: 3   LIIYLLIGAIAGFTAGLFGVGGGLIIVPILYIVFTQLNYDPNVIMHIAVGTSLATIIVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S M H + G +   + ++    L + + + + +   +    L     IF + M   M 
Sbjct: 63  ISSVMAHHKKGAVLWSVFRNLAPGLVLGSFLGAGIADLMSGQHLQLVIGIFAIWMAFKMF 122

Query: 143 KRDR--LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           +     +   R  P   ++   G   G  S   G+GGG  T   +  YG  + KA ATSA
Sbjct: 123 RGAHGVVDPNRHLPSAPIQLAAGGGIGVASAIFGIGGGSLTVPFLNRYGVVMQKAVATSA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    +  ++ G       P ++G+V+I A + I  +S +   +  ++++ +  
Sbjct: 183 ACGLPIAVAGAVGFMWFGTKQQVEVPNTIGYVHIYAFIGISIMSFITAKVGARVAHRLSP 242

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F+ ++ T    F
Sbjct: 243 AMLKKCFAGLLVTVGCYF 260



 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 20/143 (13%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  +  +    + + A    G  S +FG+GGG + VP L++          + M  A+ T
Sbjct: 129 VDPNRHLPSAPIQLAAGGGIGVASAIFGIGGGSLTVPFLNRY--------GVVMQKAVAT 180

Query: 74  SLGVIAPTSVMSFMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHV 121
           S     P +V   +                 G +++        +  IT  V + +   +
Sbjct: 181 SAACGLPIAVAGAVGFMWFGTKQQVEVPNTIGYVHIYAFIGISIMSFITAKVGARVAHRL 240

Query: 122 DKSFLNKAFAIFCLLMGILMLKR 144
             + L K FA   + +G   + +
Sbjct: 241 SPAMLKKCFAGLLVTVGCYFVYK 263


>gi|308051033|ref|YP_003914599.1| hypothetical protein Fbal_3326 [Ferrimonas balearica DSM 9799]
 gi|307633223|gb|ADN77525.1| protein of unknown function DUF81 [Ferrimonas balearica DSM 9799]
          Length = 263

 Score =  230 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 70/248 (28%), Positives = 115/248 (46%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             L+G LSGLFG+GGGLV+VPVL      MG+   + +H+A+GTSL  I  TS      H
Sbjct: 12  GVLAGILSGLFGIGGGLVIVPVLLTVLPWMGVAPEVLIHLAIGTSLATIVVTSSSGIRAH 71

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
            + G ++ + +K ++  + + +     + + +  + L + F IF LL+   M    +   
Sbjct: 72  NKRGNVDWETVKRFVPWVVLGSFAGGSVAALLPGALLERLFGIFLLLVATQMWFSLKPNP 131

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
           +R  P      + G   G +S   G+GG   +   + +    I KA   SA ++  IA  
Sbjct: 132 DRSLPKTPGLALAGGTIGTISSMFGIGGATISVPFLRWCSLPITKAVGVSATLAFPIALS 191

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            ++  + +GWG   LP WSLG+V + A   I+  S     +   L+  +    L   F+ 
Sbjct: 192 GVISYLINGWGHPQLPEWSLGYVYLPAFFGIVVASTQFVRVGATLAVKLPGHVLQRAFAA 251

Query: 270 IMFTTSFV 277
            M      
Sbjct: 252 FMAILGVR 259



 Score = 42.0 bits (98), Expect = 0.098,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +A    GT+S +FG+GG  + VP L           S+ +  A+G S  +  P ++  
Sbjct: 141 LALAGGTIGTISSMFGIGGATISVPFLRWC--------SLPITKAVGVSATLAFPIALSG 192

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G + +      +        V + +   +    L +AFA F
Sbjct: 193 VISYLINGWGHPQLPEWSLGYVYLPAFFGIVVASTQFVRVGATLAVKLPGHVLQRAFAAF 252

Query: 134 CLLMGILML 142
             ++G+ +L
Sbjct: 253 MAILGVRLL 261


>gi|224370570|ref|YP_002604734.1| hypothetical protein HRM2_34990 [Desulfobacterium autotrophicum
           HRM2]
 gi|223693287|gb|ACN16570.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 265

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 133/260 (51%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  I + ++    +G LSGL G+GGGL++VP+L  +     I +   MH+A+GTS+  I
Sbjct: 1   MLSVIVVYLILGTCAGILSGLLGIGGGLIIVPMLVASLTWQQIPEQFIMHLALGTSMATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TSV SFM H R G ++  +++     +   T + S + + +  SFL   F +F   + 
Sbjct: 61  IFTSVSSFMAHHRRGAVHWPVVRQITPGILTGTFLGSCVAARLSGSFLRGMFVVFLYYVA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           I M+   +    R  P     +  G + G +S  +G+GGG  +   M++    +++A  T
Sbjct: 121 IQMITSKKPKPSRHIPGKAGMFGVGNIIGGVSSLVGIGGGTLSVPFMMWCNIPVHEAIGT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           SA +   IA    L  IY+G    GLP +S+G++ + A+  IL  S+L  PL  +L++ +
Sbjct: 181 SAAIGFPIAIAGTLGYIYNGIHEVGLPAYSIGYIYLPALAGILSASVLTAPLGVRLAHSL 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++++   +   
Sbjct: 241 PVPKLKRVFAILLLVVATRM 260



 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 50/131 (38%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +     + G +S L G+GGG + VP +           +I +H A+GTS  +  P ++  
Sbjct: 141 MFGVGNIIGGVSSLVGIGGGTLSVPFMMWC--------NIPVHEAIGTSAAIGFPIAIAG 192

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G I +  L   +    +T  +   +   +    L + FAI 
Sbjct: 193 TLGYIYNGIHEVGLPAYSIGYIYLPALAGILSASVLTAPLGVRLAHSLPVPKLKRVFAIL 252

Query: 134 CLLMGILMLKR 144
            L++   ML  
Sbjct: 253 LLVVATRMLIS 263


>gi|293609096|ref|ZP_06691399.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829669|gb|EFF88031.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 267

 Score =  228 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 2/258 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS
Sbjct: 3   LIIYLLIGAIAGFTAGLFGVGGGLIIVPILYVVFTQLHYDPAVIMHIAVGTSLATIIVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H + G +   + ++    L I + + + +   +    L     IF ++M   M 
Sbjct: 63  FSSVSAHHKKGAVLWPVFRNLAPGLVIGSFLGAGIADLMSGQHLQLLIGIFAVVMAYRMF 122

Query: 143 KRDRL--YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           K   +     R+ P   ++++ G   G  S   G+GGG  T   +  +G  + KA ATSA
Sbjct: 123 KGAHVVVDPNRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPYLNRHGVIMQKAVATSA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    +  ++ G       P ++G+V+I A + I  +S +      K+++ +  
Sbjct: 183 ACGLPIAVAGAIGFMWFGAKEQISVPNTIGYVHIYAFIGISVMSFVTAKFGAKVAHALSP 242

Query: 261 KYLTIGFSMIMFTTSFVF 278
           + L   F+ ++      F
Sbjct: 243 QMLKKCFACLLVVVGSYF 260



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 20/146 (13%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
            V +  +  +    +  +A    G  S +FG+GGG + VP L++          + M  A
Sbjct: 126 HVVVDPNRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPYLNR--------HGVIMQKA 177

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGT------------INMKILKDWIFVLPITTVVTSLMI 118
           + TS     P +V   +     G             +++        +  +T    + + 
Sbjct: 178 VATSAACGLPIAVAGAIGFMWFGAKEQISVPNTIGYVHIYAFIGISVMSFVTAKFGAKVA 237

Query: 119 SHVDKSFLNKAFAIFCLLMGILMLKR 144
             +    L K FA   +++G   + +
Sbjct: 238 HALSPQMLKKCFACLLVVVGSYFIYK 263


>gi|260550986|ref|ZP_05825191.1| permease [Acinetobacter sp. RUH2624]
 gi|260405934|gb|EEW99421.1| permease [Acinetobacter sp. RUH2624]
          Length = 267

 Score =  228 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 124/258 (48%), Gaps = 2/258 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS
Sbjct: 3   LIIYLLIGAIAGFTAGLFGVGGGLIIVPILYVVFTQLHYDPAVIMHIAVGTSLATIIVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H + G +   + ++    L + + + + +   +    L     +F ++M   M 
Sbjct: 63  FSSVSAHHKKGAVLWSVFRNLAPGLVLGSFLGAGIADLLSGQHLQLLIGVFAVVMAYRMF 122

Query: 143 KRDRL--YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           K   +     R+ P   ++++ G   G  S   G+GGG  T   +  +G  + KA ATSA
Sbjct: 123 KGANVVVDPTRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPYLNRHGVVMQKAVATSA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    +  ++ G   +   P ++G+V+I A + I  +S +   L  K+++ +  
Sbjct: 183 ACGLPIAVAGAIGFMWFGAKEHISVPNTIGYVHIYAFIGISVMSFVTAKLGAKVAHALSP 242

Query: 261 KYLTIGFSMIMFTTSFVF 278
           + L   F+ ++      F
Sbjct: 243 QMLKKCFACLLVVVGSYF 260



 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +A    G  S +FG+GGG + VP L++          + M  A+ TS     P +V   
Sbjct: 142 FMAGGGIGIASAIFGIGGGSLTVPYLNR--------HGVVMQKAVATSAACGLPIAVAGA 193

Query: 87  MEHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +     G             +++        +  +T  + + +   +    L K FA   
Sbjct: 194 IGFMWFGAKEHISVPNTIGYVHIYAFIGISVMSFVTAKLGAKVAHALSPQMLKKCFACLL 253

Query: 135 LLMGILMLKR 144
           +++G   + +
Sbjct: 254 VVVGSYFIYK 263


>gi|325121129|gb|ADY80652.1| hypothetical protein BDGL_000066 [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 267

 Score =  228 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 122/258 (47%), Gaps = 2/258 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS
Sbjct: 3   LIIYLLIGAIAGFTAGLFGVGGGLIIVPILYVVFTQLHYDPAVIMHIAVGTSLATIIVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H + G +   + ++    L + + + + +   +    L     IF ++M   M 
Sbjct: 63  FSSVSAHHKKGAVLWPVFRNLAPGLVLGSFLGAGIADLMSGQHLQLLIGIFAVVMAYRMF 122

Query: 143 KRDRL--YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           K   +     R+ P   ++++ G   G  S   G+GGG  T   +  +G  + KA ATSA
Sbjct: 123 KGAHVVVDPTRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPYLNRHGVVMQKAVATSA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    +  ++ G       P ++G+V+I A + I  +S +      K+++ +  
Sbjct: 183 ACGLPIAVAGAIGFMWFGAKEQISVPNTIGYVHIYAFIGISVMSFVTAKFGAKVAHALSP 242

Query: 261 KYLTIGFSMIMFTTSFVF 278
           + L   F+ ++      F
Sbjct: 243 QMLKKCFACLLVVVGSYF 260



 Score = 40.4 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 20/146 (13%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
            V +     +    +  +A    G  S +FG+GGG + VP L++          + M  A
Sbjct: 126 HVVVDPTRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPYLNR--------HGVVMQKA 177

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGT------------INMKILKDWIFVLPITTVVTSLMI 118
           + TS     P +V   +     G             +++        +  +T    + + 
Sbjct: 178 VATSAACGLPIAVAGAIGFMWFGAKEQISVPNTIGYVHIYAFIGISVMSFVTAKFGAKVA 237

Query: 119 SHVDKSFLNKAFAIFCLLMGILMLKR 144
             +    L K FA   +++G   + +
Sbjct: 238 HALSPQMLKKCFACLLVVVGSYFIYK 263


>gi|169634136|ref|YP_001707872.1| hypothetical protein ABSDF2663 [Acinetobacter baumannii SDF]
 gi|184157074|ref|YP_001845413.1| permease [Acinetobacter baumannii ACICU]
 gi|239501245|ref|ZP_04660555.1| permease [Acinetobacter baumannii AB900]
 gi|260555695|ref|ZP_05827915.1| permease [Acinetobacter baumannii ATCC 19606]
 gi|332872650|ref|ZP_08440618.1| hypothetical protein HMPREF0022_00216 [Acinetobacter baumannii
           6014059]
 gi|169152928|emb|CAP01969.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter baumannii]
 gi|183208668|gb|ACC56066.1| predicted permease [Acinetobacter baumannii ACICU]
 gi|193076574|gb|ABO11233.2| putative membrane protein [Acinetobacter baumannii ATCC 17978]
 gi|260410606|gb|EEX03904.1| permease [Acinetobacter baumannii ATCC 19606]
 gi|322506973|gb|ADX02427.1| permease [Acinetobacter baumannii 1656-2]
 gi|323516840|gb|ADX91221.1| permease [Acinetobacter baumannii TCDC-AB0715]
 gi|332739179|gb|EGJ70038.1| hypothetical protein HMPREF0022_00216 [Acinetobacter baumannii
           6014059]
          Length = 267

 Score =  228 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 124/258 (48%), Gaps = 2/258 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS
Sbjct: 3   LIIYLLIGAIAGFTAGLFGVGGGLIIVPILYVVFTQLHYDPAVIMHIAVGTSLATIIVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H + G +   + ++    L I + + + +   +    L     +F ++M   M 
Sbjct: 63  FSSVSAHHKKGAVLWPVFRNLAPGLVIGSFLGAGIADLLSGQHLQLLIGVFAVVMAYRMF 122

Query: 143 KRDRL--YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           K   +     R+ P   ++++ G   G  S   G+GGG  T   +  +G  + KA ATSA
Sbjct: 123 KGAHVVVDPTRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPYLNRHGVVMQKAVATSA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    +  ++ G   +   P ++G+++I A + I  +S +   L  K+++ +  
Sbjct: 183 ACGLPIAIAGAIGFMWFGAKEHISVPNTIGYIHIYAFIGISVMSFVTAKLGAKVAHALSP 242

Query: 261 KYLTIGFSMIMFTTSFVF 278
           + L   F+ ++      F
Sbjct: 243 QMLKKCFACLLVVVGSYF 260



 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 20/146 (13%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
            V +     +    +  +A    G  S +FG+GGG + VP L++          + M  A
Sbjct: 126 HVVVDPTRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPYLNR--------HGVVMQKA 177

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGT------------INMKILKDWIFVLPITTVVTSLMI 118
           + TS     P ++   +     G             I++        +  +T  + + + 
Sbjct: 178 VATSAACGLPIAIAGAIGFMWFGAKEHISVPNTIGYIHIYAFIGISVMSFVTAKLGAKVA 237

Query: 119 SHVDKSFLNKAFAIFCLLMGILMLKR 144
             +    L K FA   +++G   + +
Sbjct: 238 HALSPQMLKKCFACLLVVVGSYFIYK 263


>gi|299771371|ref|YP_003733397.1| permease [Acinetobacter sp. DR1]
 gi|298701459|gb|ADI92024.1| permease [Acinetobacter sp. DR1]
          Length = 267

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 123/258 (47%), Gaps = 2/258 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS
Sbjct: 3   LIIYLLIGAIAGFTAGLFGVGGGLIIVPILYVVFTQLHYDPAVIMHIAVGTSLATIIVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H + G +   + ++    L I + + + +   +    L     +F ++M   M 
Sbjct: 63  FSSVSAHHKKGAVLWPVFRNLAPGLVIGSFLGAGIADLMSGQHLQLLIGVFAVVMAYRMF 122

Query: 143 KRDRL--YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           K   +     R+ P   ++++ G   G  S   G+GGG  T   +  +G  + KA ATSA
Sbjct: 123 KGANVVVDPTRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPYLNRHGVVMQKAVATSA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    +  ++ G   +   P ++G+V+I A + I  +S +      K+++ +  
Sbjct: 183 ACGLPIAIAGAIGFMWFGAKEHISVPNTIGYVHIYAFIGISVMSFVTAKFGAKVAHALSP 242

Query: 261 KYLTIGFSMIMFTTSFVF 278
           + L   F+ ++      F
Sbjct: 243 QMLKKCFACLLVVVGSYF 260



 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +A    G  S +FG+GGG + VP L++          + M  A+ TS     P ++   
Sbjct: 142 FMAGGGIGIASAIFGIGGGSLTVPYLNR--------HGVVMQKAVATSAACGLPIAIAGA 193

Query: 87  MEHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +     G             +++        +  +T    + +   +    L K FA   
Sbjct: 194 IGFMWFGAKEHISVPNTIGYVHIYAFIGISVMSFVTAKFGAKVAHALSPQMLKKCFACLL 253

Query: 135 LLMGILMLKR 144
           +++G   + +
Sbjct: 254 VVVGSYFIYK 263


>gi|71909635|ref|YP_287222.1| hypothetical protein Daro_4025 [Dechloromonas aromatica RCB]
 gi|71849256|gb|AAZ48752.1| Protein of unknown function DUF81 [Dechloromonas aromatica RCB]
          Length = 266

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 70/251 (27%), Positives = 114/251 (45%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +     G ++GLFGVGGGL +VP +   F          MH+A+GTS+  I  TS+ S  
Sbjct: 10  LLGIFGGFVAGLFGVGGGLTLVPFMYMLFVAQSFPPEHVMHLALGTSMATIVFTSLSSMR 69

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            H  HG +   I++     L + T   SL+   V    +   F I      + M+   + 
Sbjct: 70  AHHAHGAVRWDIVRHLAPGLVLGTFGGSLVAGQVPTGPMTAIFVIIVYYASLQMMLDFKP 129

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
              R+ P     +  G   G +S  +  GGG  +   MLF   +I+ A  TS+ +   IA
Sbjct: 130 KAHRQLPGPLGLFAAGGTIGIVSSMVAAGGGFLSIPFMLFCNVAIHAAVGTSSALGFPIA 189

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
               +  I +G    GLP ++LG++ + A + I+ +S+L+ PL  KL++ +  K L   F
Sbjct: 190 LAGAIGYIVAGGNDAGLPAYALGYIYLPAFVGIVTMSVLVAPLGAKLAHRLPVKQLKRAF 249

Query: 268 SMIMFTTSFVF 278
              +   +   
Sbjct: 250 GGFLALLATRM 260



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +  A    G +S +   GGG + +P +           ++ +H A+GTS  +  P ++  
Sbjct: 141 LFAAGGTIGIVSSMVAAGGGFLSIPFMLFC--------NVAIHAAVGTSSALGFPIALAG 192

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G I +      + +  +   + + +   +    L +AF  F
Sbjct: 193 AIGYIVAGGNDAGLPAYALGYIYLPAFVGIVTMSVLVAPLGAKLAHRLPVKQLKRAFGGF 252

Query: 134 CLLMGILMLKR 144
             L+   ML  
Sbjct: 253 LALLATRMLFN 263


>gi|256828364|ref|YP_003157092.1| hypothetical protein Dbac_0552 [Desulfomicrobium baculatum DSM
           4028]
 gi|256577540|gb|ACU88676.1| protein of unknown function DUF81 [Desulfomicrobium baculatum DSM
           4028]
          Length = 265

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 138/260 (53%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           + + + L +    ++G L+GL G+GGGLV+VP+L    +L  +   + MH+A+GTS+  I
Sbjct: 1   MFEVVALYLAVGAVAGVLAGLLGIGGGLVIVPMLVFCMELQNLPQDLIMHMALGTSMASI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TSV SFM H R G +   +++  +  + + T + + + + +    L   F +F   + 
Sbjct: 61  MFTSVSSFMAHHRRGAVEWDVVRRIVAGILVGTFLGAWVAAQMSTGALKIFFVVFLYYVC 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             ML   +    R  P     +  G V G +S  +G+GGG  +   M+++   I+KA  T
Sbjct: 121 YQMLSGKKPKPSRVMPGAAGMFGAGNVIGVVSSLVGIGGGTLSVPFMVWHNIPIHKAIGT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           SA +   IA    +  I +GWG++ LPP+SLG+V++ A++ I  +S++  PL  +L++ +
Sbjct: 181 SAAIGFPIAVAGTVGYIMNGWGVDTLPPYSLGYVSLVALVSIAVMSVITAPLGVRLAHSL 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++I+F      
Sbjct: 241 PVDKLKRVFALILFLVGTKM 260



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +  A  + G +S L G+GGG + VP +           +I +H A+GTS  +  P +V  
Sbjct: 141 MFGAGNVIGVVSSLVGIGGGTLSVPFMVW--------HNIPIHKAIGTSAAIGFPIAVAG 192

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G +++  L     +  IT  +   +   +    L + FA+ 
Sbjct: 193 TVGYIMNGWGVDTLPPYSLGYVSLVALVSIAVMSVITAPLGVRLAHSLPVDKLKRVFALI 252

Query: 134 CLLMGILMLKR 144
             L+G  ML  
Sbjct: 253 LFLVGTKMLIS 263


>gi|169797013|ref|YP_001714806.1| hypothetical protein ABAYE3014 [Acinetobacter baumannii AYE]
 gi|213156583|ref|YP_002318244.1| hypothetical protein AB57_0847 [Acinetobacter baumannii AB0057]
 gi|215484473|ref|YP_002326708.1| hypothetical protein ABBFA_002816 [Acinetobacter baumannii
           AB307-0294]
 gi|301347730|ref|ZP_07228471.1| hypothetical protein AbauAB0_15815 [Acinetobacter baumannii AB056]
 gi|301512478|ref|ZP_07237715.1| hypothetical protein AbauAB05_12872 [Acinetobacter baumannii AB058]
 gi|301594390|ref|ZP_07239398.1| hypothetical protein AbauAB059_01225 [Acinetobacter baumannii
           AB059]
 gi|332852101|ref|ZP_08433928.1| hypothetical protein HMPREF0021_01501 [Acinetobacter baumannii
           6013150]
 gi|332867499|ref|ZP_08437652.1| hypothetical protein HMPREF0020_01264 [Acinetobacter baumannii
           6013113]
 gi|169149940|emb|CAM87834.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter baumannii AYE]
 gi|213055743|gb|ACJ40645.1| hypothetical protein AB57_0847 [Acinetobacter baumannii AB0057]
 gi|213987788|gb|ACJ58087.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
 gi|332729473|gb|EGJ60812.1| hypothetical protein HMPREF0021_01501 [Acinetobacter baumannii
           6013150]
 gi|332733916|gb|EGJ65061.1| hypothetical protein HMPREF0020_01264 [Acinetobacter baumannii
           6013113]
          Length = 267

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 123/258 (47%), Gaps = 2/258 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   ++G  +GLFGVGGGL++VP+L   F  +  D  + MH+A+GTSL  I  TS
Sbjct: 3   LIIYLLIGAIAGFTAGLFGVGGGLIIVPILYVVFTQLHYDPVVIMHIAVGTSLATIIVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H + G +   + ++    L I + + + +   +    L     +F ++M   M 
Sbjct: 63  FSSVSAHHKKGAVLWPVFRNLAPGLVIGSFLGAGIADLLSGQHLQLLIGVFAVVMAYRMF 122

Query: 143 KRDRL--YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           K   +     R+ P   ++++ G   G  S   G+GGG  T   +  +G  + KA ATSA
Sbjct: 123 KGAHVVVDPTRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPYLNRHGVVMQKAVATSA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    +  ++ G   +   P ++G+++I A + I  +S +   L  K+++ +  
Sbjct: 183 ACGLPIAIAGAIGFMWFGAKEHISVPNTIGYIHIYAFIGISVMSFVTAKLGAKVAHALSP 242

Query: 261 KYLTIGFSMIMFTTSFVF 278
           + L   F+ ++      F
Sbjct: 243 QMLKKCFACLLVVVGSYF 260



 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 20/146 (13%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
            V +     +    +  +A    G  S +FG+GGG + VP L++          + M  A
Sbjct: 126 HVVVDPTRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPYLNR--------HGVVMQKA 177

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGT------------INMKILKDWIFVLPITTVVTSLMI 118
           + TS     P ++   +     G             I++        +  +T  + + + 
Sbjct: 178 VATSAACGLPIAIAGAIGFMWFGAKEHISVPNTIGYIHIYAFIGISVMSFVTAKLGAKVA 237

Query: 119 SHVDKSFLNKAFAIFCLLMGILMLKR 144
             +    L K FA   +++G   + +
Sbjct: 238 HALSPQMLKKCFACLLVVVGSYFIYK 263


>gi|308445775|ref|XP_003087015.1| hypothetical protein CRE_13893 [Caenorhabditis remanei]
 gi|308269488|gb|EFP13441.1| hypothetical protein CRE_13893 [Caenorhabditis remanei]
          Length = 267

 Score =  227 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 69/258 (26%), Positives = 118/258 (45%), Gaps = 2/258 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +    ++G  +GLFGVGGGL++VP+L   F  MG D S+ MH+A+GTSL  I  TS
Sbjct: 3   LIIYLGIGAIAGFAAGLFGVGGGLIIVPILYVVFTKMGYDPSVIMHMALGTSLATIIVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H + G +   + K+    L I + + + +   +    L      F + +   M 
Sbjct: 63  ISSVTAHHKKGAVLWNVFKNLAPGLVIGSFIGAGIADILSGQHLQLIIGAFAIWVAFKMF 122

Query: 143 K--RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           K    ++   ++ P   ++ + G   G  S   G+GGG  T   +   G  + KA ATSA
Sbjct: 123 KGANVKVDESKQLPTAPMQMLAGGGIGVASAIFGIGGGSLTVPYLNKNGVVMQKAVATSA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    L  ++ G         S+G+V+I A + I  +S +      K+++ +  
Sbjct: 183 ACGLPIAIAGALGFMFFGAQEPTEIKNSIGYVHIYAFIGISVMSFITAKFGAKVAHALSP 242

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F+ ++      F
Sbjct: 243 AMLKKCFACLLTVVGLYF 260



 Score = 42.0 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 49/130 (37%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A    G  S +FG+GGG + VP L+         + + M  A+ TS     P ++   
Sbjct: 142 MLAGGGIGVASAIFGIGGGSLTVPYLN--------KNGVVMQKAVATSAACGLPIAIAGA 193

Query: 87  ME------------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G +++        +  IT    + +   +  + L K FA   
Sbjct: 194 LGFMFFGAQEPTEIKNSIGYVHIYAFIGISVMSFITAKFGAKVAHALSPAMLKKCFACLL 253

Query: 135 LLMGILMLKR 144
            ++G+  + +
Sbjct: 254 TVVGLYFIYQ 263


>gi|225076651|ref|ZP_03719850.1| hypothetical protein NEIFLAOT_01702 [Neisseria flavescens
           NRL30031/H210]
 gi|224952017|gb|EEG33226.1| hypothetical protein NEIFLAOT_01702 [Neisseria flavescens
           NRL30031/H210]
          Length = 269

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 1/260 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I  ++     +G ++GLFGVGGG ++VPV+  A QL GI       H+A+GTS  V+ 
Sbjct: 5   DIILALLAVGSAAGFIAGLFGVGGGTLIVPVVLWALQLQGIGAHPYAQHLAIGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S     +   I+   ++     + +  ++ +    ++    L   F  F   + +
Sbjct: 65  FTTFSSMYAQHKKHAIDWATVRRMTPGMILGVLLGAATAKYMPTLALQVFFIAFLAFIAL 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L+  +    R  P+       G + G  S  +G+GGG  +   +L+     ++A  TS
Sbjct: 125 KTLRDSKPKPSRTLPELPGLTAVGTLFGAASSWVGIGGGSLSVPFLLYCNFPAHRAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +    +G  +  LP  + GF+ + AV I+   +IL  PL  K ++ + 
Sbjct: 185 SGLAWPIAIAGTIGYFANGLHIANLPEGTAGFIYLPAVAILSVATILFAPLGVKTAHKLP 244

Query: 260 KKYLTIGFSMIMFTTSFVFA 279
            + L I F +++   +   A
Sbjct: 245 ARKLKIAFGIMLLLIAAKMA 264


>gi|294669269|ref|ZP_06734348.1| putative membrane protein [Neisseria elongata subsp. glycolytica
           ATCC 29315]
 gi|291308679|gb|EFE49922.1| putative membrane protein [Neisseria elongata subsp. glycolytica
           ATCC 29315]
          Length = 270

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 127/260 (48%), Gaps = 1/260 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           + +  ++    ++G ++G+FGVGGG ++VP++    Q+ G ++     H+A+GTS  V+ 
Sbjct: 5   EMVAAMLAVGAVAGVIAGMFGVGGGTILVPLVLWILQMQGAENFQYAQHIAIGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  S     +   ++M +L+  +  +       +L+  ++    L   F +F  ++ +
Sbjct: 65  FTSFASARAQYKRQAVDMDVLRAMVPGVLCGVAAGALVAQYLPNKGLQVFFTLFIAILAV 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   +   ER+ P     +  G + G LS  +G+GGG  T   + F    +++A  TS
Sbjct: 125 RALLGIKPTPERQLPGRRGLFGMGGLFGLLSSWIGIGGGSLTVPYLTFCNVPVHRAVGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A +   IA    L   ++GW   GLP  S GFV + AV I+   ++L  PL  +LS+ + 
Sbjct: 185 AALGWPIAVAGTLGYAWAGWNQGGLPEGSAGFVYLPAVGILAAATLLSAPLGVRLSHKLP 244

Query: 260 KKYLTIGFSMIMFTTSFVFA 279
              L  GF +++   +   A
Sbjct: 245 ADKLKKGFGILLLLIALRMA 264


>gi|89093747|ref|ZP_01166693.1| hypothetical protein MED92_04594 [Oceanospirillum sp. MED92]
 gi|89081877|gb|EAR61103.1| hypothetical protein MED92_04594 [Oceanospirillum sp. MED92]
          Length = 266

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 117/260 (45%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  I   ++    +G ++GLFG+GGGL++VPVL  +F+L G+   +  H A+ TSL  I
Sbjct: 1   MLFTILTYLILGAAAGVVAGLFGIGGGLLIVPVLVFSFELQGMSPDVLTHAAVATSLATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS+ S + H + G +   I K     + +   +       +   +L      F +L+ 
Sbjct: 61  VATSISSTLAHNKKGAVRWDIFKPVTLGILLGAFLGVKTAGLMTGEWLQITLGCFVILVA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           I M    +        +N    I G   G+LS   G+GGG  +     +    + +A AT
Sbjct: 121 IQMALNLKPDAGETAVNNKDLAIAGGFIGWLSSIFGIGGGTLSVPYFTWRRVQMQQAVAT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           SA     IA    L  I+ GW    +P WS GF+ + A+L I+  S +      KL++ +
Sbjct: 181 SAACGLPIALMGALTNIWEGWQNPAMPEWSAGFIYLPALLGIVLTSSIFAKYGAKLAHRL 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++ +      F
Sbjct: 241 PAPVLKRIFAVFLLCVGLRF 260



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +A    G LS +FG+GGG + VP  +           + M  A+ TS     P ++M 
Sbjct: 141 LAIAGGFIGWLSSIFGIGGGTLSVPYFTW--------RRVQMQQAVATSAACGLPIALMG 192

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G I +  L   +    I     + +   +    L + FA+F
Sbjct: 193 ALTNIWEGWQNPAMPEWSAGFIYLPALLGIVLTSSIFAKYGAKLAHRLPAPVLKRIFAVF 252

Query: 134 CLLMGILML 142
            L +G+  L
Sbjct: 253 LLCVGLRFL 261


>gi|262379146|ref|ZP_06072302.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
 gi|262298603|gb|EEY86516.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
          Length = 269

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 2/258 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS
Sbjct: 3   LIIYLLIGAIAGFAAGLFGVGGGLIIVPILYIVFTQLNYDPNVLMHMAVGTSLATIIVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S M H + G +   + K+    L + + + + +   +    L  A  +F + +   M 
Sbjct: 63  ISSVMAHHKRGAVLWAVFKNLAPGLVLGSFLGAGVADLLSGQHLQLAIGLFAIWVAYKMF 122

Query: 143 KRDRL--YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           +   +    +R  P   V+ + G   G  S   G+GGG  T   +  +G  + KA ATSA
Sbjct: 123 RGAHVQVNPDRTLPSAPVQMLAGGGIGIASAIFGIGGGSLTVPYLNRHGVIMQKAVATSA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    L  I+ G   N   P ++G+V+I A + I  +S +   L  ++++M+  
Sbjct: 183 ACGLPIAIAGALGFIWFGRQANVEVPNAIGYVHIYAFIGISTMSFITAKLGARVAHMLSP 242

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F+ ++      F
Sbjct: 243 TMLKKCFAGLLSVVGLYF 260



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 56/146 (38%), Gaps = 20/146 (13%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
            V ++ D  +    + ++A    G  S +FG+GGG + VP L++          + M  A
Sbjct: 126 HVQVNPDRTLPSAPVQMLAGGGIGIASAIFGIGGGSLTVPYLNR--------HGVIMQKA 177

Query: 71  MGTSLGVIAPTSVMSFMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMI 118
           + TS     P ++   +                 G +++        +  IT  + + + 
Sbjct: 178 VATSAACGLPIAIAGALGFIWFGRQANVEVPNAIGYVHIYAFIGISTMSFITAKLGARVA 237

Query: 119 SHVDKSFLNKAFAIFCLLMGILMLKR 144
             +  + L K FA    ++G+  + +
Sbjct: 238 HMLSPTMLKKCFAGLLSVVGLYFIYQ 263


>gi|255318628|ref|ZP_05359859.1| hypothetical protein ACIRA0001_0830 [Acinetobacter radioresistens
           SK82]
 gi|255304310|gb|EET83496.1| hypothetical protein ACIRA0001_0830 [Acinetobacter radioresistens
           SK82]
          Length = 270

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 2/258 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS
Sbjct: 4   LIIYLLIGAIAGFAAGLFGVGGGLIIVPILYIVFTQLNYDPNVLMHMAVGTSLATIIVTS 63

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S M H + G +   + K+    L + + + + +   +    L  A  +F + +   M 
Sbjct: 64  ISSVMAHHKRGAVLWAVFKNLAPGLVLGSFLGAGVADLLSGQHLQLAIGLFAIWVAYKMF 123

Query: 143 KRDRL--YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           +   +    +R  P   V+ + G   G  S   G+GGG  T   +  +G  + KA ATSA
Sbjct: 124 RGAHVQVNPDRTLPSAPVQMLAGGGIGIASAIFGIGGGSLTVPYLNRHGVIMQKAVATSA 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    L  I+ G   N   P ++G+V+I A + I  +S +   L  ++++M+  
Sbjct: 184 ACGLPIAIAGALGFIWFGRQANVEVPNAIGYVHIYAFIGISTMSFITAKLGARVAHMLSP 243

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F+ ++      F
Sbjct: 244 TMLKKCFAGLLSVVGLYF 261



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 56/146 (38%), Gaps = 20/146 (13%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
            V ++ D  +    + ++A    G  S +FG+GGG + VP L++          + M  A
Sbjct: 127 HVQVNPDRTLPSAPVQMLAGGGIGIASAIFGIGGGSLTVPYLNR--------HGVIMQKA 178

Query: 71  MGTSLGVIAPTSVMSFMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMI 118
           + TS     P ++   +                 G +++        +  IT  + + + 
Sbjct: 179 VATSAACGLPIAIAGALGFIWFGRQANVEVPNAIGYVHIYAFIGISTMSFITAKLGARVA 238

Query: 119 SHVDKSFLNKAFAIFCLLMGILMLKR 144
             +  + L K FA    ++G+  + +
Sbjct: 239 HMLSPTMLKKCFAGLLSVVGLYFIYQ 264


>gi|294649510|ref|ZP_06726931.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|292824571|gb|EFF83353.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 266

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 2/258 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GT L  I  TS
Sbjct: 3   LIIYLLIGAIAGFTAGLFGVGGGLIIVPILYIVFTQLNYDPNVIMHIAVGTFLATIIVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S M H + G +   + ++    L + + + + +   +    L     IF + M   M 
Sbjct: 63  ISSVMAHHKKGAVLWSVFRNLAPGLVLGSFLGAGIADLMSGQHLQLVIGIFAIWMAFKMF 122

Query: 143 KRDR--LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           +     +   R  P   ++   G   G  S   G+GGG  T   +  YG  + KA ATSA
Sbjct: 123 RGAHGVVDPNRHLPSGPIQLAAGGGIGVASAIFGIGGGSLTVPFLNRYGVVMQKAVATSA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    +  ++ G       P ++G+V+I A + I  +S +   +  ++++ +  
Sbjct: 183 ACGLPIAVAGAVGFMWFGTKQQVEVPNTIGYVHIYAFIGISIMSFITAKVGARVAHRLSP 242

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F+ ++ T    F
Sbjct: 243 AMLKKSFAGLLVTVGCYF 260



 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + A    G  S +FG+GGG + VP L++          + M  A+ TS     P +V   
Sbjct: 142 LAAGGGIGVASAIFGIGGGSLTVPFLNRY--------GVVMQKAVATSAACGLPIAVAGA 193

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G +++        +  IT  V + +   +  + L K+FA   
Sbjct: 194 VGFMWFGTKQQVEVPNTIGYVHIYAFIGISIMSFITAKVGARVAHRLSPAMLKKSFAGLL 253

Query: 135 LLMGILMLKR 144
           + +G   + +
Sbjct: 254 VTVGCYFVYK 263


>gi|303246521|ref|ZP_07332800.1| protein of unknown function DUF81 [Desulfovibrio fructosovorans JJ]
 gi|302492231|gb|EFL52106.1| protein of unknown function DUF81 [Desulfovibrio fructosovorans JJ]
          Length = 267

 Score =  225 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 68/259 (26%), Positives = 119/259 (45%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +    +     +G ++GL GVGGG+V+VP L   F   G+     M +A+GTSL  I 
Sbjct: 4   LSFWLAYLAFGCAAGIIAGLLGVGGGIVVVPALYFLFTAQGLPSEHIMQMALGTSLATIV 63

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TSV SF  H + G +   I K     + I + + + + + +   FL   F +F   + I
Sbjct: 64  FTSVASFRAHDKRGAVRWDIFKSITPGILIGSFLGAWVAAQLSTKFLKGFFVVFLYYVSI 123

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M+   +    R  P     +  G   G +S  +G+GGG  T   M +    I+ A  T+
Sbjct: 124 QMILNIKPKPSRHIPGTAGMFTTGGGVGLISNMVGIGGGTITVPFMTWCNIPIHVAVGTA 183

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           + +   IA   ++  I +G G   LP  S+G++ + A++ I+  S+L      KL++ + 
Sbjct: 184 SAIGFPIAAAGVIGYIANGLGKADLPGMSIGYIYLPALIGIVATSMLTAKYGAKLAHALP 243

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              L   F++ +   +   
Sbjct: 244 VGTLKRVFALFLLAMATRM 262



 Score = 49.3 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +       G +S + G+GGG + VP ++          +I +HVA+GT+  +  P +   
Sbjct: 143 MFTTGGGVGLISNMVGIGGGTITVPFMTWC--------NIPIHVAVGTASAIGFPIAAAG 194

Query: 86  FMEHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +  +G             I +  L   +    +T    + +   +    L + FA+F
Sbjct: 195 VIGYIANGLGKADLPGMSIGYIYLPALIGIVATSMLTAKYGAKLAHALPVGTLKRVFALF 254

Query: 134 CLLMGILML 142
            L M   ML
Sbjct: 255 LLAMATRML 263


>gi|241758532|ref|ZP_04756651.1| hypothetical protein NEIFL0001_1429 [Neisseria flavescens SK114]
 gi|241321367|gb|EER57515.1| hypothetical protein NEIFL0001_1429 [Neisseria flavescens SK114]
          Length = 269

 Score =  225 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 1/260 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I  ++     +G ++GLFGVGGG ++VPV+    QL GI D     H+A+GTS  V+ 
Sbjct: 5   DIILALLAVGSAAGFIAGLFGVGGGTLIVPVVLWTLQLQGIGDHPYAQHLAIGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S     +   I+   ++     + +  ++ +    ++    L   F  F   + +
Sbjct: 65  FTTFSSMYAQHKKHAIDWATVRRTTPGMILGVLLGAATAKYMPTLALQVFFIAFLAFIAL 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L+  +    R  P        G + G  S  +G+GGG  +   +L+     ++A  TS
Sbjct: 125 KTLRDSKPKPSRTLPALPGLTAVGTLFGAASSWVGIGGGSLSVPFLLYCNFPAHRAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +    +G  +  LP  + GF+ + AV I+   +IL  PL  K ++ + 
Sbjct: 185 SGLAWPIAIAGTIGYFANGLHIANLPEGAAGFIYLPAVAILSVATILFAPLGVKTAHKLP 244

Query: 260 KKYLTIGFSMIMFTTSFVFA 279
            + L I F +++   +   A
Sbjct: 245 ARKLKIAFGIMLLLIAAKMA 264


>gi|262280099|ref|ZP_06057884.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262260450|gb|EEY79183.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 267

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 2/258 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS
Sbjct: 3   LIIYLLIGAIAGFTAGLFGVGGGLIIVPILYVVFTQLHYDPAVIMHIAVGTSLATIIVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H + G +   + ++    L I + + + +   +    L     IF + M   M 
Sbjct: 63  FSSVSAHHKKGAVLWPVFRNLAPGLIIGSFLGAGIADLMSGQHLQLLIGIFAVSMAYRMF 122

Query: 143 KRDRL--YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           K   +     R+ P   ++ + G   G  S   G+GGG  T   +  +G  + KA ATSA
Sbjct: 123 KGAHVVVDPTRQLPSASMQVMAGGGIGVASAIFGIGGGSLTVPYLNRHGVVMQKAVATSA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    +  ++ G   +   P ++G+V+I A + I  +S +      K+++ +  
Sbjct: 183 ACGLPIAVAGAIGFMWFGAKEHISVPNTIGYVHIYAFIGISVMSFITAKFGAKVAHALSP 242

Query: 261 KYLTIGFSMIMFTTSFVF 278
           + L   F+ ++      F
Sbjct: 243 QMLKKCFACLLVVVGSYF 260



 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 20/146 (13%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
            V +     +    + ++A    G  S +FG+GGG + VP L++          + M  A
Sbjct: 126 HVVVDPTRQLPSASMQVMAGGGIGVASAIFGIGGGSLTVPYLNR--------HGVVMQKA 177

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGT------------INMKILKDWIFVLPITTVVTSLMI 118
           + TS     P +V   +     G             +++        +  IT    + + 
Sbjct: 178 VATSAACGLPIAVAGAIGFMWFGAKEHISVPNTIGYVHIYAFIGISVMSFITAKFGAKVA 237

Query: 119 SHVDKSFLNKAFAIFCLLMGILMLKR 144
             +    L K FA   +++G   + +
Sbjct: 238 HALSPQMLKKCFACLLVVVGSYFIYK 263


>gi|307133197|ref|YP_003885213.1| Integral membrane protein [Dickeya dadantii 3937]
 gi|306530726|gb|ADN00657.1| Integral membrane protein [Dickeya dadantii 3937]
          Length = 284

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 122/249 (48%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +++I   +    + G ++GL G+GGG +MVPVL+  F   G++ S  +H+A+GTS+  I 
Sbjct: 19  IEWILAYLALGAVVGFMAGLLGIGGGGIMVPVLTALFAAQGVEASHLVHLALGTSMAAIV 78

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T++ S   H +H  +   ++      + + T   + + + +    L   F+ F   + +
Sbjct: 79  ITAISSLRTHHQHQAVLWPVVWRITPAILVGTFAATWLAALLPTRALAIFFSCFMAYVSL 138

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M+   +    R+ P      + G+  G +S  + +GGG  T   + +    I +A  TS
Sbjct: 139 QMVLNIKPKPHRQLPGVPGMSLAGLTIGGISALVAIGGGSLTVPFLTWCNVRIQQAIGTS 198

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A V   IA    L  + +GW   GLP +S+G+V++ AV +I  +S    P+  +L++ + 
Sbjct: 199 AAVGLPIALSGALGYMINGWSATGLPAFSVGYVSLPAVALISAVSFFTAPVGARLAHRLP 258

Query: 260 KKYLTIGFS 268
              L   F+
Sbjct: 259 VVTLKKAFA 267


>gi|283851886|ref|ZP_06369163.1| protein of unknown function DUF81 [Desulfovibrio sp. FW1012B]
 gi|283572802|gb|EFC20785.1| protein of unknown function DUF81 [Desulfovibrio sp. FW1012B]
          Length = 267

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 119/259 (45%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + Y    +    ++G ++GL GVGGG+V+VP L   F   G      M +A+GTSL  IA
Sbjct: 4   LTYWLAYLAFGGVAGIIAGLLGVGGGIVVVPALVWFFTAQGFPAETIMQMALGTSLAAIA 63

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ S   H   G +   ++K     + I T   + + + +   FL   F  F   + +
Sbjct: 64  FTSISSCRAHHCRGAVLWPVVKRITPGILIGTFAGTCLAARLSTGFLKGFFVCFLYYVSV 123

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            ML   R    R+ P        G   G +S  +G+GGG  +   +++    I+ A  TS
Sbjct: 124 QMLLNIRPKPTRQIPGGPGMSAMGFAIGAVSSLVGIGGGTMSVPFLVWCNVPIHMAVGTS 183

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A +   IA    +  I +G G   LPP S G+V++ A++ +  +SIL  P   +L++ + 
Sbjct: 184 AAIGFPIAVAGSVGYIVNGLGAANLPPLSFGYVSLPALVGVAAVSILTAPYGARLAHKLP 243

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              L   F++ +   +   
Sbjct: 244 VAALKRFFAVFLLAMATRM 262



 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 20/125 (16%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
            F  G +S L G+GGG + VP L           ++ +H+A+GTS  +  P +V   + +
Sbjct: 147 GFAIGAVSSLVGIGGGTMSVPFLVWC--------NVPIHMAVGTSAAIGFPIAVAGSVGY 198

Query: 90  R------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G +++  L     V  +T    + +   +  + L + FA+F L M
Sbjct: 199 IVNGLGAANLPPLSFGYVSLPALVGVAAVSILTAPYGARLAHKLPVAALKRFFAVFLLAM 258

Query: 138 GILML 142
              ML
Sbjct: 259 ATRML 263


>gi|261381166|ref|ZP_05985739.1| putative membrane protein [Neisseria subflava NJ9703]
 gi|284795980|gb|EFC51327.1| putative membrane protein [Neisseria subflava NJ9703]
          Length = 269

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 1/260 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I  ++     +G ++GLFGVGGG ++VPV+  A QL GI       H+A+GTS  V+ 
Sbjct: 5   DIILALLAVGSAAGFIAGLFGVGGGTLIVPVVLWALQLQGIGSHPYAQHLAIGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S     +   I+   ++     + +  ++ ++   ++    L   F  F   + +
Sbjct: 65  FTTFSSMYAQHKKHAIDWATVRRMTPGMILGVLLGAVTAKYMPTLALQVFFIAFLAFIAV 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L+  +    R  P  +     G + G  S  +G+GGG  +   +L+     ++A  TS
Sbjct: 125 KTLRDSKPKPSRTLPALHGLTAVGTLFGAASSWVGIGGGSLSVPFLLYCNFPAHRAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +    +G  +  LP  + GF+ + AV I+   +IL  PL  K ++ + 
Sbjct: 185 SGLAWPIAIAGTIGYFANGLHVAHLPEGAAGFIYLPAVAILSVATILFAPLGVKTAHKLP 244

Query: 260 KKYLTIGFSMIMFTTSFVFA 279
            + L I F +++   +   A
Sbjct: 245 ARKLKIAFGIMLLLIAAKMA 264


>gi|317154193|ref|YP_004122241.1| hypothetical protein Daes_2492 [Desulfovibrio aespoeensis Aspo-2]
 gi|316944444|gb|ADU63495.1| protein of unknown function DUF81 [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 266

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 125/260 (48%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++    L IV   ++G L+GL G+GGGLV+VP+L+ AF+L    +    H+A+GTS+  I
Sbjct: 1   MLTTYILYIVLGAVAGILAGLLGIGGGLVIVPMLNIAFELQNFPEMHIQHIALGTSMATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS+ S   H R G IN          + I T + +++ S +   FL   F  F   + 
Sbjct: 61  IFTSLSSMYAHHRRGAINYPAFWRLAPGIVIGTYLGAMLASALPTGFLKAFFGFFLYYVA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           I ML   +    R+ P        G   G  S  +G+GGG  T   + +   +++   AT
Sbjct: 121 IQMLLNIKPKPHRELPGVVGTSAAGTGIGIFSALVGIGGGTLTVPFLSWCNQTMHVCIAT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +A V   IA       +  GW ++G+P   +G+V I A L I+ +S+L  PL  KL++ +
Sbjct: 181 AAAVGLPIALAGTTGYVIGGWNVDGIPGPHIGYVYIPAFLGIIAMSVLTAPLGAKLAHSL 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++++       
Sbjct: 241 PVDKLKRIFAVLLILVGSRM 260



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 48/127 (37%), Gaps = 20/127 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
            A    G  S L G+GGG + VP LS          +  MHV + T+  V  P ++    
Sbjct: 143 AAGTGIGIFSALVGIGGGTLTVPFLSWC--------NQTMHVCIATAAAVGLPIALAGTT 194

Query: 88  EHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            +               G + +      I +  +T  + + +   +    L + FA+  +
Sbjct: 195 GYVIGGWNVDGIPGPHIGYVYIPAFLGIIAMSVLTAPLGAKLAHSLPVDKLKRIFAVLLI 254

Query: 136 LMGILML 142
           L+G  ML
Sbjct: 255 LVGSRML 261


>gi|262373321|ref|ZP_06066600.1| permease [Acinetobacter junii SH205]
 gi|262313346|gb|EEY94431.1| permease [Acinetobacter junii SH205]
          Length = 266

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 2/258 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   ++G  +GLFGVGGGL++VP+L   F  +  D ++ MH+A+GTSL  I  TS
Sbjct: 3   LIIYLLIGAIAGFTAGLFGVGGGLIIVPILFIVFTQLNYDPNVIMHIAVGTSLATIVVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S M H +   +   + K+    L + +   + +   +    L     IF + M   M 
Sbjct: 63  ISSVMAHHKKSAVLWSVFKNLAPGLILGSFFGAGIADLMSGQHLQLVIGIFAVWMAYKMF 122

Query: 143 KRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           +         +  P   +++  G   G  S   G+GGG  T   +  +G  + +A ATSA
Sbjct: 123 RGAHAQIDPNKHLPSAPLQFAAGGGIGIASAIFGIGGGSLTVPYLNRHGVVMQQAVATSA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    +  ++ G       P ++G+V++ A L I  +S +   +  ++++ +  
Sbjct: 183 ACGLPIALAGAIGFMWFGAKEQIDVPNTIGYVHVYAFLGISVMSFITAKVGARVAHRLSA 242

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F+ ++      F
Sbjct: 243 AMLKKCFAGLLVFVGSYF 260



 Score = 42.4 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 20/146 (13%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
              +  +  +    L   A    G  S +FG+GGG + VP L++          + M  A
Sbjct: 126 HAQIDPNKHLPSAPLQFAAGGGIGIASAIFGIGGGSLTVPYLNR--------HGVVMQQA 177

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGT------------INMKILKDWIFVLPITTVVTSLMI 118
           + TS     P ++   +     G             +++        +  IT  V + + 
Sbjct: 178 VATSAACGLPIALAGAIGFMWFGAKEQIDVPNTIGYVHVYAFLGISVMSFITAKVGARVA 237

Query: 119 SHVDKSFLNKAFAIFCLLMGILMLKR 144
             +  + L K FA   + +G   + +
Sbjct: 238 HRLSAAMLKKCFAGLLVFVGSYFIYK 263


>gi|212702293|ref|ZP_03310421.1| hypothetical protein DESPIG_00304 [Desulfovibrio piger ATCC 29098]
 gi|212674286|gb|EEB34769.1| hypothetical protein DESPIG_00304 [Desulfovibrio piger ATCC 29098]
          Length = 265

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 63/229 (27%), Positives = 101/229 (44%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P++   F   G+       +A+GTSL  I  TS+ S   H + G ++  I ++    + +
Sbjct: 32  PMMVAVFPSQGVPAEYVQQLALGTSLASIMVTSISSSRAHHKRGAVHWDIFRNITPGILL 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T +  L+ +H+   FL   F  F   + + ML   R    R+ P        G + G +
Sbjct: 92  GTFLGGLVATHMPTLFLKAFFICFLGFVSLQMLSNYRPPASREMPGALGTAGVGGIIGLI 151

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   M F    ++ A  TSA +   IA    L  I  GW   GLP   L
Sbjct: 152 SSFVGIGGGTLSVPFMSFCNVPLHHAVGTSAAIGFPIAVAGTLGYIVGGWNTPGLPADCL 211

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           GFVN+ A   I   S +  P+  +LS+ +    L  GF++ +   +   
Sbjct: 212 GFVNLTAFFGIAAASFMTAPIGARLSHSLPTDKLKKGFAVFLIIVALRM 260



 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 20/128 (15%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
              + G +S   G+GGG + VP +S          ++ +H A+GTS  +  P +V   + 
Sbjct: 144 VGGIIGLISSFVGIGGGTLSVPFMSFC--------NVPLHHAVGTSAAIGFPIAVAGTLG 195

Query: 89  HR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           +               G +N+           +T  + + +   +    L K FA+F ++
Sbjct: 196 YIVGGWNTPGLPADCLGFVNLTAFFGIAAASFMTAPIGARLSHSLPTDKLKKGFAVFLII 255

Query: 137 MGILMLKR 144
           + + ML  
Sbjct: 256 VALRMLLG 263


>gi|262375655|ref|ZP_06068887.1| permease [Acinetobacter lwoffii SH145]
 gi|262309258|gb|EEY90389.1| permease [Acinetobacter lwoffii SH145]
          Length = 267

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 69/258 (26%), Positives = 120/258 (46%), Gaps = 2/258 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   ++G  +GLFGVGGGL++VP+L   F  +  D S+ MH+A+GTSL  I  TS
Sbjct: 3   LIIYLLIGAIAGFTAGLFGVGGGLIIVPILYIVFTQLQYDPSVIMHMAVGTSLATIIVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S M H + G +   + ++    L   + + + +  ++    L      F + +   M 
Sbjct: 63  ISSVMAHHQRGAVLWPVFRNLAPGLIFGSFLGAGIADYLSGQGLQLLIGFFAVWVAFRMF 122

Query: 143 KRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           +   +     +K P   V+   G   G  S   G+GGG  T   +   G  + KA ATSA
Sbjct: 123 RGAHIQIDPNQKLPSTPVQIAAGGGIGVASAIFGIGGGSLTVPFLNRCGIVMQKAVATSA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    L  I+ G       P ++G+++I A + I  +S     L  K+++++  
Sbjct: 183 ACGLPIAVAGALGFIWFGKQAQVTVPNTIGYIHIYAFIGISMMSFFTAKLGAKVAHLLSP 242

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F+ ++ T    F
Sbjct: 243 AVLKKCFAALLTTVGLYF 260



 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 52/146 (35%), Gaps = 20/146 (13%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
            + +  +  +    + I A    G  S +FG+GGG + VP L++          I M  A
Sbjct: 126 HIQIDPNQKLPSTPVQIAAGGGIGVASAIFGIGGGSLTVPFLNRC--------GIVMQKA 177

Query: 71  MGTSLGVIAPTSVMSFMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMI 118
           + TS     P +V   +                 G I++        +   T  + + + 
Sbjct: 178 VATSAACGLPIAVAGALGFIWFGKQAQVTVPNTIGYIHIYAFIGISMMSFFTAKLGAKVA 237

Query: 119 SHVDKSFLNKAFAIFCLLMGILMLKR 144
             +  + L K FA     +G+  + +
Sbjct: 238 HLLSPAVLKKCFAALLTTVGLYFIYQ 263


>gi|239906522|ref|YP_002953263.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
 gi|239796388|dbj|BAH75377.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
          Length = 267

 Score =  223 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 124/259 (47%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + ++   +V    +G ++GL GVGGG+V+VP L   F   G    + M +A+GTSL  I 
Sbjct: 4   LSFLLAYLVFGAFAGIIAGLLGVGGGIVVVPALFWFFTAQGFSQELIMQMALGTSLAAIM 63

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TSV S   H R G +   I+K     + + T + S + + +   FL   F  F   + I
Sbjct: 64  FTSVSSLRAHHRRGAVVWPIVKAITPGILVGTFLGSCVAAKLSTGFLKGFFVAFLYYVSI 123

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            ML   +    R+ P     +  G+  G +S  +G+GGG  +   M++   +++ A  TS
Sbjct: 124 QMLLNIKPKAHRQIPGKLGMFGAGLAIGAVSSLVGIGGGTMSVPFMVWCNVAMHTAVGTS 183

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A +   IA    +  I +G+G   LP  S G++ + A++ +  +S+L  P   KL++ + 
Sbjct: 184 AAIGFPIALAGTIGYIINGFGAPNLPSLSFGYIYLPALVGVAAVSVLTAPYGAKLAHKLP 243

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              L   F++ +   +   
Sbjct: 244 VSTLKRFFAVFLLAMATRM 262



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +  A    G +S L G+GGG + VP +           ++ MH A+GTS  +  P ++  
Sbjct: 143 MFGAGLAIGAVSSLVGIGGGTMSVPFMVWC--------NVAMHTAVGTSAAIGFPIALAG 194

Query: 86  FMEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G I +  L     V  +T    + +   +  S L + FA+F
Sbjct: 195 TIGYIINGFGAPNLPSLSFGYIYLPALVGVAAVSVLTAPYGAKLAHKLPVSTLKRFFAVF 254

Query: 134 CLLMGILML 142
            L M   ML
Sbjct: 255 LLAMATRML 263


>gi|114569506|ref|YP_756186.1| hypothetical protein Mmar10_0955 [Maricaulis maris MCS10]
 gi|114339968|gb|ABI65248.1| protein of unknown function DUF81 [Maricaulis maris MCS10]
          Length = 272

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 78/257 (30%), Positives = 131/257 (50%), Gaps = 2/257 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +  +      +G ++GLFG+GGG+VMVP +  AFQ +G DD   M VA+GTSL VI  T
Sbjct: 7   LVVAMAATGAFAGLIAGLFGIGGGIVMVPAMYFAFQFLGYDDPRIMQVAVGTSLAVIIAT 66

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  S   H +   ++  +L+ W   + I T+V S +   +  +FL   F +  +++    
Sbjct: 67  SARSVAAHAKRDAVDFAVLRGWAPWIVIGTLVGSRIAHLLPGNFLTGLFGVTAMILSAQF 126

Query: 142 LK-RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
              R         P   +++  G + G LS  +G+GGG+F   LM   G  I+KA AT+A
Sbjct: 127 FFGRPDWRLADDLPGGPLRWGLGGLIGILSALMGIGGGVFGVTLMTLCGKPIHKAVATAA 186

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
           G    I  P  +  + +GW  + +P +SLG+VN+    ++   +  + PL  KL++ + +
Sbjct: 187 GFGVAIGLPGAIGFVLNGWDQDAVP-YSLGYVNLPGFALLAGSAFFVAPLGAKLAHSLPE 245

Query: 261 KYLTIGFSMIMFTTSFV 277
           K L   F++ +     +
Sbjct: 246 KTLKRCFAVGLVIVGVM 262



 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 20/129 (15%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLM----LFYGAS----IYKATATSAGVSALIAFP 209
                G   G ++G  G+GGGI     M     F G      +  A  TS  V       
Sbjct: 10  AMAATGAFAGLIAGLFGIGGGIVMVPAMYFAFQFLGYDDPRIMQVAVGTSLAV-----II 64

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           A   R  +         +++       +    P  ++ T + +++++++   +LT  F +
Sbjct: 65  ATSARSVAAHAKRDAVDFAV-------LRGWAPWIVIGTLVGSRIAHLLPGNFLTGLFGV 117

Query: 270 IMFTTSFVF 278
                S  F
Sbjct: 118 TAMILSAQF 126


>gi|319637918|ref|ZP_07992684.1| hypothetical protein HMPREF0604_00307 [Neisseria mucosa C102]
 gi|317401073|gb|EFV81728.1| hypothetical protein HMPREF0604_00307 [Neisseria mucosa C102]
          Length = 269

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 1/259 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIA 79
           D I  ++     +G ++GLFGVGGG ++VPV+  A QL G+ +     H+A+GTS  V+ 
Sbjct: 5   DIILALLAVGSAAGFIAGLFGVGGGTLVVPVVLWALQLQGVGNHPYAQHLAIGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S     +   I+   ++     + +   + +    ++    L   F  F  L+ +
Sbjct: 65  FTTFSSMYAQHKKYAIDWATVRRMTPGMILGVFLGAATAKYMPTLALQVFFIAFLTLIAL 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L+  +    R  P        G + G  S  +G+GGG  +   +L+     ++A  TS
Sbjct: 125 KTLRDSKPTPSRTLPALPGLTAAGTLFGAASSWVGIGGGSLSVPFLLYCNFPAHRAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +    +G  +  LP  + GF+ + AV I+   +IL  PL  K ++ + 
Sbjct: 185 SGLAWPIAVAGTIGYFANGLPIANLPEGAAGFIYLPAVAILSIATILFAPLGVKTAHKLP 244

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            + L I F +++   +   
Sbjct: 245 ARKLKIAFGIMLLLIAAKM 263


>gi|258404296|ref|YP_003197038.1| hypothetical protein Dret_0158 [Desulfohalobium retbaense DSM 5692]
 gi|257796523|gb|ACV67460.1| protein of unknown function DUF81 [Desulfohalobium retbaense DSM
           5692]
          Length = 265

 Score =  222 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 62/229 (27%), Positives = 111/229 (48%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L+  F   G+ D+  +H+A+GTSL  I  TS+ S   H +HG +   +       +  
Sbjct: 32  PMLTFMFTAQGLPDAYILHLALGTSLATILFTSISSLRAHNQHGAVKWPVFWRIAPGIIF 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T + S + + +   FL   FA F   +GI ML+  +    R+ P     +  G   G  
Sbjct: 92  GTFLGSWIAAQLSTDFLKGFFACFLFYVGIRMLRGSKPKPSRQLPGTLGIFGAGSGIGVF 151

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   +++   +++KA  T+A +   IA    L  + +G G   LP + L
Sbjct: 152 SSLVGIGGGTLSVPFLVWCNVTMHKAIGTAAAIGFPIAVAGSLGYLVNGLGTEVLPWYCL 211

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           GF++I A+L I+  S+L  P+  +L++ +    L   F++++       
Sbjct: 212 GFIHIPALLGIILASVLTAPVGARLAHKLPVARLKKIFAVLLLFVGLRM 260



 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I  A    G  S L G+GGG + VP L           ++ MH A+GT+  +  P +V  
Sbjct: 141 IFGAGSGIGVFSSLVGIGGGTLSVPFLVWC--------NVTMHKAIGTAAAIGFPIAVAG 192

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G I++  L   I    +T  V + +   +  + L K FA+ 
Sbjct: 193 SLGYLVNGLGTEVLPWYCLGFIHIPALLGIILASVLTAPVGARLAHKLPVARLKKIFAVL 252

Query: 134 CLLMGILML 142
            L +G+ ML
Sbjct: 253 LLFVGLRML 261


>gi|94264877|ref|ZP_01288651.1| Protein of unknown function DUF81 [delta proteobacterium MLMS-1]
 gi|93454647|gb|EAT04915.1| Protein of unknown function DUF81 [delta proteobacterium MLMS-1]
          Length = 265

 Score =  222 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 79/260 (30%), Positives = 131/260 (50%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  I L +    ++G L+GL G+GGGLV+VP+L  AF   G+ ++  MH+A+GTSL  I
Sbjct: 1   MLTVIALYLGLGAVAGILAGLLGIGGGLVIVPLLVFAFSWQGLPEAHLMHLALGTSLASI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS+ SF+ H R G +   +++     + + T   S + + +  +FL   FA+F   + 
Sbjct: 61  IFTSISSFLAHHRRGAVYWPVVRGVAPGVVLGTFAGSFVAAALSTTFLQVFFALFLYFVC 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             ML   R    R  P        G   G  S  +G+GGG  +   ML+    I++A  T
Sbjct: 121 WQMLSGRRPQPGRSLPGAAGLNAVGGGIGIFSSLVGIGGGTLSVPFMLWCNIGIHQAIGT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           SA +   IA       + +GW    LP WSLG++ + A+L I+  S+L  PL  +L++ +
Sbjct: 181 SAAIGFPIAVAGTAGYLINGWQSTALPAWSLGYLYLPALLGIVAASVLTAPLGVRLAHSL 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++++   +   
Sbjct: 241 PVASLKKIFALLLLLVATRM 260



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +       G  S L G+GGG + VP +           +I +H A+GTS  +  P +V  
Sbjct: 141 LNAVGGGIGIFSSLVGIGGGTLSVPFMLWC--------NIGIHQAIGTSAAIGFPIAVAG 192

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
              +               G + +  L   +    +T  +   +   +  + L K FA+ 
Sbjct: 193 TAGYLINGWQSTALPAWSLGYLYLPALLGIVAASVLTAPLGVRLAHSLPVASLKKIFALL 252

Query: 134 CLLMGILML 142
            LL+   ML
Sbjct: 253 LLLVATRML 261


>gi|327479075|gb|AEA82385.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 260

 Score =  221 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 76/233 (32%), Positives = 112/233 (48%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
              +G L+GLFGVGGGL++VPVL  +F   G    I  H+A+GTSL  I  TSV S + H
Sbjct: 10  GGFAGVLAGLFGVGGGLIIVPVLVFSFSAQGFSQDILTHLAVGTSLATIVFTSVNSIITH 69

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
            R G +   ++    F + +   + SL  + +    L K   +F L M + M    R   
Sbjct: 70  HRLGAVRWPMVLWMTFGILLGAALGSLTAAAIQGPMLQKIIGVFALAMAVQMGFDLRPKA 129

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
             + P      + G+V G+ S   G+GGG  +   + +    + +A ATSA     IA  
Sbjct: 130 TGRVPGRPELSLVGVVIGWASAIFGIGGGSLSVPYLTWRSVPMQQAVATSAACGLPIAVA 189

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
             L  +  GW    LP WSLGFV + A+L I   S+    L  +L++ +  K 
Sbjct: 190 GALSFMAVGWHEAHLPQWSLGFVYLPALLGIAATSMFFARLGARLAHRLSAKV 242


>gi|329119353|ref|ZP_08248039.1| membrane lipoprotein [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464498|gb|EGF10797.1| membrane lipoprotein [Neisseria bacilliformis ATCC BAA-1200]
          Length = 270

 Score =  221 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 76/260 (29%), Positives = 132/260 (50%), Gaps = 1/260 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           + + +++ A  L+G ++G+FGVGGG ++VP++    Q+ G++  +   H A+GTS  V+ 
Sbjct: 5   ETVAVMLAAGSLAGVVAGMFGVGGGTILVPLVLWVLQIQGVEGFAYAQHTAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  S +   R G ++ +ILK  I  + +     +L+  H+    L   FA+F  ++ +
Sbjct: 65  FTSFSSALSQHRKGAVDWRILKSMIPGVLLGVAAGALVSRHLPNKGLQVFFALFAAVIAV 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   +    R+ P     +  G + G LS  +G+GGG  T   + F    +++A  TS
Sbjct: 125 RSLAGIKPVPSRQLPGRGGLFSAGSLFGLLSSWIGIGGGSLTVPFLTFCNVPVHRAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A +   IA    L   Y+G G  GLP  S GFV + AV ++   ++L  PL  +LS+ + 
Sbjct: 185 AALGWPIALAGALGYWYAGIGAAGLPAGSAGFVYLPAVAVLAVATLLSAPLGVRLSHRLP 244

Query: 260 KKYLTIGFSMIMFTTSFVFA 279
              L  GF +++   +   A
Sbjct: 245 AARLKQGFGILLLLIALRMA 264


>gi|332975644|gb|EGK12533.1| protein of hypothetical function DUF81 [Psychrobacter sp.
           1501(2011)]
          Length = 273

 Score =  221 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 9/265 (3%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   L+G  +GLFGVGGG ++VP+L   F  MG D +  MH+A+GTSL  I  TS
Sbjct: 3   LIIFLIIGALAGFAAGLFGVGGGTIIVPLLFIVFTQMGYDPNTIMHLALGTSLATIIVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S M H + G++   + K+    + +     + +   +    L     IF L +   M 
Sbjct: 63  ISSLMAHNKKGSVMWPVFKNLAPGMALGCFFGAGLAGQISGLHLQIIVGIFLLWVAYRMF 122

Query: 143 KRDRL---------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
             ++                P    +   G V G  S   G+GGG  T   +  YG  + 
Sbjct: 123 FGNKKPATSATNTSNASVALPSTPKQLAAGGVIGIASAIFGIGGGSLTVPYLTRYGVVMQ 182

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           KA  TSA     IA    L  +  G       P ++GFV+I A L I  +S     L  K
Sbjct: 183 KAVGTSAACGLPIAVAGALGFMLFGMQQKVDVPNTIGFVHIYAFLGISVMSFFTAKLGAK 242

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVF 278
           +++++    L   F++++      F
Sbjct: 243 VAHILSPAMLKKCFAILLTVVGCYF 267



 Score = 42.4 bits (99), Expect = 0.075,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + A  + G  S +FG+GGG + VP L++          + M  A+GTS     P +V   
Sbjct: 149 LAAGGVIGIASAIFGIGGGSLTVPYLTRY--------GVVMQKAVGTSAACGLPIAVAGA 200

Query: 87  MEHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +     G             +++        +   T  + + +   +  + L K FAI  
Sbjct: 201 LGFMLFGMQQKVDVPNTIGFVHIYAFLGISVMSFFTAKLGAKVAHILSPAMLKKCFAILL 260

Query: 135 LLMGILMLKR 144
            ++G   L +
Sbjct: 261 TVVGCYFLYK 270


>gi|328544450|ref|YP_004304559.1| Membrane protein [polymorphum gilvum SL003B-26A1]
 gi|326414192|gb|ADZ71255.1| Membrane protein [Polymorphum gilvum SL003B-26A1]
          Length = 276

 Score =  221 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 157/262 (59%), Gaps = 1/262 (0%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++     ++ +  ++G L+G+FG+GGG V+VPVL +   ++G+D+S+ MHV++ TSLG+
Sbjct: 9   EMIGLALALLASGAVAGLLAGMFGIGGGAVLVPVLYQFLAVLGVDESVRMHVSVATSLGI 68

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I PTS+ SF+ H++ G ++M++LK W   +P   VV SL+ + V    L   FA+   ++
Sbjct: 69  IVPTSIRSFLAHKKRGAVDMELLKTWAIPVPAGVVVASLVAASVSGDGLKGIFAVIAAVV 128

Query: 138 GILMLK-RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           G+ M+  R+        P   ++ + G + GF S  +G+GGG+  N  M  YG  I++A 
Sbjct: 129 GLRMIFNRESWRLGDDIPGFPIRPLCGALIGFFSTLMGIGGGVMNNTFMTLYGRPIHQAV 188

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           ATS+G   LI+ P ++  I++GWG   LPP+S G+VN+  V +I+PI+ L  PL  ++++
Sbjct: 189 ATSSGTGVLISVPGVIGMIWAGWGAAALPPFSAGYVNLLGVALIIPITTLTAPLGVRIAH 248

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            + ++ +   F   +   +  F
Sbjct: 249 ALKRRTMEYAFGTFLLIVAARF 270


>gi|262369273|ref|ZP_06062601.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262315341|gb|EEY96380.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 267

 Score =  221 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 2/258 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   ++G  +GLFGVGGGL+++P+L   F  +  D S+ MH+A+GTSL  I  TS
Sbjct: 3   LIIYLLIGAIAGFAAGLFGVGGGLIIIPILYVVFTHLNYDPSVIMHMAVGTSLATIIVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H + G +   + ++    L +   + + +  ++    L      F + +   M 
Sbjct: 63  MSSVSAHHKRGAVLWSVFRNLAPGLVMGAFLGAGIADYMSGHGLQLLIGFFAVWVAYKMF 122

Query: 143 KRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
               +     R+ P    +   G   G  S   G+GGG  T   +  +G  + KA ATSA
Sbjct: 123 SGAHIEVDPSRQLPSTGKQLFVGAGIGVASAIFGIGGGSLTVPYLNRHGVVMQKAVATSA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    L  ++ G       P ++G++++ A   I  +S +      K+++++  
Sbjct: 183 ACGLPIAVAGALGFMWFGHQAEVNVPNTIGYIHVYAFFGIALMSFITAKFGAKVAHLLSP 242

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   FS ++      F
Sbjct: 243 AMLKKCFSGLLVVVGLYF 260



 Score = 40.4 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +      G  S +FG+GGG + VP L++          + M  A+ TS     P +V   
Sbjct: 142 LFVGAGIGVASAIFGIGGGSLTVPYLNR--------HGVVMQKAVATSAACGLPIAVAGA 193

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G I++        +  IT    + +   +  + L K F+   
Sbjct: 194 LGFMWFGHQAEVNVPNTIGYIHVYAFFGIALMSFITAKFGAKVAHLLSPAMLKKCFSGLL 253

Query: 135 LLMGILMLKR 144
           +++G+  + +
Sbjct: 254 VVVGLYFIYQ 263


>gi|71065408|ref|YP_264135.1| transmembrane protein [Psychrobacter arcticus 273-4]
 gi|71038393|gb|AAZ18701.1| probable transmembrane protein [Psychrobacter arcticus 273-4]
          Length = 274

 Score =  221 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 10/266 (3%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   L+G  +GLFGVGGG ++VP+L   F  M       MH+A+GTSL  I  TS
Sbjct: 3   LIIFLIIGALAGFAAGLFGVGGGTIIVPLLFIVFTRMDYSPDSIMHLALGTSLATIIVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S M H + G +   + K+    L +   + + +   +   +L     +F L +G  M 
Sbjct: 63  ISSLMAHNKKGAVMWPVFKNLAPGLAVGCFLGAGIAGQISGLYLQLIVGVFLLWLGYKMF 122

Query: 143 KRDRLYCERK----------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
              +   +             P    +   G V G  S  LG+GGG  T   +  YG  +
Sbjct: 123 TDGKKRLDSNINSASNGNAVLPSKSKQLAAGGVIGVASAILGIGGGSLTVPYLTRYGVVM 182

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            KA  TSA     IA    L  +  G       P ++GFV+I A L I  +S     L  
Sbjct: 183 QKAVGTSAACGLPIAIAGALGFMVFGMQQEVNVPNTIGFVHIYAFLGISIMSFFTAKLGA 242

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVF 278
           K+++M+  + L   F++++      F
Sbjct: 243 KVAHMLSPQLLKKCFAVLLTVVGCYF 268



 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + A  + G  S + G+GGG + VP L++          + M  A+GTS     P ++   
Sbjct: 150 LAAGGVIGVASAILGIGGGSLTVPYLTRY--------GVVMQKAVGTSAACGLPIAIAGA 201

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G +++        +   T  + + +   +    L K FA+  
Sbjct: 202 LGFMVFGMQQEVNVPNTIGFVHIYAFLGISIMSFFTAKLGAKVAHMLSPQLLKKCFAVLL 261

Query: 135 LLMGILMLKR 144
            ++G   L +
Sbjct: 262 TVVGCYFLFK 271


>gi|148654076|ref|YP_001281169.1| hypothetical protein PsycPRwf_2279 [Psychrobacter sp. PRwf-1]
 gi|148573160|gb|ABQ95219.1| protein of unknown function DUF81 [Psychrobacter sp. PRwf-1]
          Length = 273

 Score =  221 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 114/265 (43%), Gaps = 9/265 (3%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   L+G  +GLFGVGGG ++VP+L   F  MG D    MH+A+GTSL  I  TS
Sbjct: 3   LIIFLIIGALAGFAAGLFGVGGGTIIVPLLFIVFTQMGYDPDTIMHLALGTSLATIIVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S M H + G++   + K+    + +     + +   +    L     IF L +   M 
Sbjct: 63  ISSLMAHNKKGSVMWPVFKNLAPGMALGCFFGAGLAGQISGLHLQIIVGIFLLWVAYRMF 122

Query: 143 KRDRLYCERK---------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
              +                P    +   G V G  S   G+GGG  T   +  YG  + 
Sbjct: 123 FGGKKAAASTTDDNTAPAILPSKPRQLAAGGVIGIASAIFGIGGGSLTVPYLTRYGVVMQ 182

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           KA  TSA     IA    L  +  G       P ++GFV+I A L I  +S     L  K
Sbjct: 183 KAVGTSAACGLPIAIAGALGFMLFGMQQKIDVPNTIGFVHIYAFLGISVMSFFTAKLGAK 242

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVF 278
           +++++    L   F++++      F
Sbjct: 243 VAHILSPAMLKKCFAILLTVVGCYF 267



 Score = 42.8 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + A  + G  S +FG+GGG + VP L++          + M  A+GTS     P ++   
Sbjct: 149 LAAGGVIGIASAIFGIGGGSLTVPYLTRY--------GVVMQKAVGTSAACGLPIAIAGA 200

Query: 87  MEHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +     G             +++        +   T  + + +   +  + L K FAI  
Sbjct: 201 LGFMLFGMQQKIDVPNTIGFVHIYAFLGISVMSFFTAKLGAKVAHILSPAMLKKCFAILL 260

Query: 135 LLMGILMLKR 144
            ++G   L +
Sbjct: 261 TVVGCYFLYK 270


>gi|218886301|ref|YP_002435622.1| hypothetical protein DvMF_1203 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757255|gb|ACL08154.1| protein of unknown function DUF81 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 265

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 73/260 (28%), Positives = 130/260 (50%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  + L +V   ++G L+GL GVGGGLV+VP+L+ AF L  I      H+A+GTS+  I
Sbjct: 1   MILTLALYLVVGAIAGILAGLLGVGGGLVIVPMLNFAFALQDIPGDYMQHLALGTSMASI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS+ SF  H + G +   ++      +   T++ + +++ +  +FL   F  F   + 
Sbjct: 61  MFTSISSFRAHHKRGAVLWNVVWRITPGIITGTLIGTWVVAQLSTNFLKGFFVCFLYWVA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             ML   +    R+ P     +  G V G +S  +G+GGG  +   M +   +++ A  T
Sbjct: 121 AQMLLNLKPKASRELPGTMGMFGMGNVIGGVSSLVGIGGGTLSVPFMAWCNVAMHTAIGT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           SA +   IA    +  I +G    GLP  + GFV + A++ I+  S+L  PL  +L++ +
Sbjct: 181 SAAIGFPIAVSGTVGYIVNGLATQGLPANTFGFVYLPALVGIVCASVLTAPLGARLAHSL 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++++   +   
Sbjct: 241 PVTKLKRIFAVLLIVMATKM 260



 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 20/127 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             + G +S L G+GGG + VP ++          ++ MH A+GTS  +  P +V   + +
Sbjct: 145 GNVIGGVSSLVGIGGGTLSVPFMAWC--------NVAMHTAIGTSAAIGFPIAVSGTVGY 196

Query: 90  ------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G + +  L   +    +T  + + +   +  + L + FA+  ++M
Sbjct: 197 IVNGLATQGLPANTFGFVYLPALVGIVCASVLTAPLGARLAHSLPVTKLKRIFAVLLIVM 256

Query: 138 GILMLKR 144
              ML  
Sbjct: 257 ATKMLIG 263


>gi|242237519|ref|YP_002985700.1| hypothetical protein Dd703_0059 [Dickeya dadantii Ech703]
 gi|242129576|gb|ACS83878.1| protein of unknown function DUF81 [Dickeya dadantii Ech703]
          Length = 268

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 70/249 (28%), Positives = 123/249 (49%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V++I   +    + G ++GL G+GGG +MVPVL+  F   G+  S  +H+A+GTS+  I 
Sbjct: 3   VEWILAYLALGAVVGFMAGLLGIGGGGIMVPVLTGLFAAQGVAPSHLVHLALGTSMAAIV 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+V S   H +H  +   ++      + I T   + + + V    L   F+ F   + +
Sbjct: 63  MTAVSSLRTHHQHQAVLWPVVWRIAPAILIGTFAATWLATKVPTRVLAIFFSCFMAYVAV 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M+   +    R+ P      + G+V G +S  + +GGG  T   + +    I +A  TS
Sbjct: 123 QMVLNIKPKPNRQLPGTPGLSLAGLVIGGISALVAIGGGSLTVPFLTWCNVRIQQAIGTS 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A V   IA    L  + +GW   GLP +S+G+V++ AV++I  +S    P+  +L++ + 
Sbjct: 183 AAVGLPIALAGALGYMVNGWSTTGLPAFSMGYVSLPAVVLISMVSFFTAPVGARLAHRLP 242

Query: 260 KKYLTIGFS 268
              L   F+
Sbjct: 243 VVTLKKCFA 251


>gi|226946825|ref|YP_002801898.1| hypothetical protein Avin_48190 [Azotobacter vinelandii DJ]
 gi|226721752|gb|ACO80923.1| Conserved hypothetical protein [Azotobacter vinelandii DJ]
          Length = 260

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 122/256 (47%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L +    ++G L+GLFG+GGG+++VPVL  +F   G D ++  H+A+GTSL  I  TS
Sbjct: 3   FLLYLPLGAVAGVLAGLFGIGGGIIIVPVLVFSFTAQGFDPAVLTHLAVGTSLATIVFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S + H R G +   +       + +  V+ SL  + +    L K   +F + +G+ M 
Sbjct: 63  INSVIAHHRRGAVLWPLFVWLTAGILVGAVLGSLTAAAIQGPMLQKIIGVFAIAVGLQMG 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R  P      + G+V G+ S   G+GGG  T   + +    + +A ATSA  
Sbjct: 123 LDLKPRASRGVPGKSALGLAGVVIGWASAIFGIGGGSLTVPFLTWRSVPMPQAVATSAAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA  + L  +  GW    LP WSLGFV + A+L I   S+        L++ +  + 
Sbjct: 183 GLPIALCSALSFMAVGWNETHLPAWSLGFVYLPALLGIAATSMFFARFGANLAHRLPPRL 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F++ +      F
Sbjct: 243 LKRLFALQLSAVGLYF 258



 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 20/130 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +A  + G  S +FG+GGG + VP L+          S+ M  A+ TS     P ++ S
Sbjct: 139 LGLAGVVIGWASAIFGIGGGSLTVPFLTW--------RSVPMPQAVATSAACGLPIALCS 190

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G + +  L              + +   +    L + FA+ 
Sbjct: 191 ALSFMAVGWNETHLPAWSLGFVYLPALLGIAATSMFFARFGANLAHRLPPRLLKRLFALQ 250

Query: 134 CLLMGILMLK 143
              +G+  L 
Sbjct: 251 LSAVGLYFLF 260


>gi|91788651|ref|YP_549603.1| hypothetical protein Bpro_2789 [Polaromonas sp. JS666]
 gi|91697876|gb|ABE44705.1| protein of unknown function DUF81 [Polaromonas sp. JS666]
          Length = 266

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 99/231 (42%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVP ++      G      + +A+ TSL  I  TS+ S   H + G +   I++     +
Sbjct: 33  MVPFITLILTSQGYPPEYTVKMAVATSLATICFTSLSSVRAHHQRGAVLWPIVRLLAPGI 92

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            + ++V + +   +    L   FAIF       M    +    R  P     +  G V G
Sbjct: 93  LLGSLVGAQVAVALPGKILGVLFAIFVAFSATQMFLNRKPKPSRTLPGRLGTFSMGWVIG 152

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            LS  +G GG   +   M +    I+ A  TSA +   IA    L  +++G  L  +P  
Sbjct: 153 MLSSLVGAGGAFVSVPFMTWCNVKIHDAVGTSAALGFPIALAGTLGYMWAGQDLPQMPAG 212

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           S+G++ +  +L+I   SI   PL  + ++ +  + L   F+ +++  +  F
Sbjct: 213 SVGYLYLPGLLVISLASISTAPLGARTAHRMDIQPLKKVFAGVLYVLAGYF 263



 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 20/127 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
            ++ G LS L G GG  V VP ++          ++ +H A+GTS  +  P ++   + +
Sbjct: 148 GWVIGMLSSLVGAGGAFVSVPFMTWC--------NVKIHDAVGTSAALGFPIALAGTLGY 199

Query: 90  R------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G + +  L         T  + +     +D   L K FA    ++
Sbjct: 200 MWAGQDLPQMPAGSVGYLYLPGLLVISLASISTAPLGARTAHRMDIQPLKKVFAGVLYVL 259

Query: 138 GILMLKR 144
               L R
Sbjct: 260 AGYFLLR 266


>gi|226942130|ref|YP_002797204.1| hypothetical protein LHK_03217 [Laribacter hongkongensis HLHK9]
 gi|226717057|gb|ACO76195.1| DUF81 domain containing protein [Laribacter hongkongensis HLHK9]
          Length = 267

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 1/229 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++VP +    +  G+   +  H+A+GTSL V+  TS  S   H   G ++  I+K     
Sbjct: 31  IIVPAMVWVLEAAGVTHQV-QHLALGTSLAVMVFTSFASVRAHHARGAVDWSIVKRMAPA 89

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + +  +V S +   +    L   F ++  ++ + ML   +    R  P     +  G V 
Sbjct: 90  MIVGMLVGSQIAGWIPSHDLKWFFVVYAYVIALQMLADKKPQGGRPLPGPLGLWSSGGVI 149

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  +G+GGG  +   M +    + +A ATSA +   IA    +  + SGW    LPP
Sbjct: 150 GVISSFVGIGGGSMSVPFMSWCNVPMPRAIATSAALGWPIAVAGAVGYVISGWHAPDLPP 209

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            ++GFV +  +L +  +++L+ P   +L++ +    L   F+ +M   +
Sbjct: 210 GAVGFVYLPGLLALSVVTVLVAPQGARLAHRLPVSRLKKVFAGLMAVMA 258



 Score = 42.4 bits (99), Expect = 0.077,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 20/126 (15%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           +  + G +S   G+GGG + VP +S          ++ M  A+ TS  +  P +V   + 
Sbjct: 145 SGGVIGVISSFVGIGGGSMSVPFMSWC--------NVPMPRAIATSAALGWPIAVAGAVG 196

Query: 89  HR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           +               G + +  L     V  +     + +   +  S L K FA    +
Sbjct: 197 YVISGWHAPDLPPGAVGFVYLPGLLALSVVTVLVAPQGARLAHRLPVSRLKKVFAGLMAV 256

Query: 137 MGILML 142
           M   ML
Sbjct: 257 MATQML 262


>gi|27375621|ref|NP_767150.1| hypothetical protein bll0510 [Bradyrhizobium japonicum USDA 110]
 gi|27348758|dbj|BAC45775.1| bll0510 [Bradyrhizobium japonicum USDA 110]
          Length = 287

 Score =  219 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 90/278 (32%), Positives = 148/278 (53%), Gaps = 9/278 (3%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           LM  L    +V+   L+I    LSG L+G+FG+GGG ++VPV  + F++ G+   + M +
Sbjct: 2   LMAGLDIKEIVELALLLIATGALSGFLAGVFGIGGGAILVPVFYECFRIAGVPLEVRMPL 61

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
            +GTSL VI PTS+ SF  H + G ++M IL+ W   + I  V  S++  H  +      
Sbjct: 62  CVGTSLAVIIPTSIRSFQAHYKRGAVDMAILRVWWLPIVIGVVAGSVVARHAPERLFKIV 121

Query: 130 FAIFCLLMGILMLK-RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F        + ++  R+        P   V  I+G   G LS  +G+GGG+F+NLLM FY
Sbjct: 122 FVCVAWSAAVRLIFARETWKLGDDLPKGPVMRIYGFCVGILSTLMGIGGGLFSNLLMTFY 181

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL--------PPWSLGFVNIGAVLII 240
           G  I++A ATS+ ++ LI+ P  L  IY+GW              P++LG+V++   +++
Sbjct: 182 GRPIHQAVATSSALAVLISIPGALGYIYAGWPAAASYPAVAALQVPFALGYVSLIGAVLV 241

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +P+S++  PL  + ++ + K+ L   F   +F     F
Sbjct: 242 MPMSLVTAPLGVRAAHAMSKRTLETAFGCYLFIVGSRF 279


>gi|332702666|ref|ZP_08422754.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332552815|gb|EGJ49859.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 263

 Score =  219 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 63/229 (27%), Positives = 107/229 (46%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L  AF  +G      MH+A+GTSL  I  TS+ SF  H + G +   ++K     + +
Sbjct: 30  PALVFAFTGLGYPAEHIMHLALGTSLASIMFTSISSFRAHHKRGAVLWSVVKAITPGIIV 89

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T   S + S +   FL   F  F   + I ML   +   +R  P     +  G   G +
Sbjct: 90  GTYAGSYVASMLSTGFLKGFFVAFLYWVSIQMLLNIKPKPKRALPGTPGMFAAGSTIGVV 149

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   M      ++ A  TSA +   IA    +  + +G    GLPP S+
Sbjct: 150 SSLVGIGGGSLSVPFMTLCNIPMHTAVGTSAAIGFPIAVAGAVGYLVNGLSAQGLPPMSI 209

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G++++ A++ +  +S+L  PL  KL++ +    L   F++++  T+   
Sbjct: 210 GYISMPALIGVAGMSVLTAPLGAKLAHALPVDKLKKIFALLLIITATRM 258



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +  A    G +S L G+GGG + VP ++          +I MH A+GTS  +  P +V  
Sbjct: 139 MFAAGSTIGVVSSLVGIGGGSLSVPFMTLC--------NIPMHTAVGTSAAIGFPIAVAG 190

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G I+M  L     +  +T  + + +   +    L K FA+ 
Sbjct: 191 AVGYLVNGLSAQGLPPMSIGYISMPALIGVAGMSVLTAPLGAKLAHALPVDKLKKIFALL 250

Query: 134 CLLMGILML 142
            ++    ML
Sbjct: 251 LIITATRML 259


>gi|146309229|ref|YP_001189694.1| hypothetical protein Pmen_4215 [Pseudomonas mendocina ymp]
 gi|145577430|gb|ABP86962.1| protein of unknown function DUF81 [Pseudomonas mendocina ymp]
          Length = 260

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 74/256 (28%), Positives = 127/256 (49%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L +V    +G L+GLFGVGGGL++VPVL  +F   G+   I  H+A+GTSL  I  TS
Sbjct: 3   LLLYLVLGAAAGVLAGLFGVGGGLIIVPVLVLSFTSQGMPSEILTHLAVGTSLATIVFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S +EH R G +   + +     + +   + +L  + +    L K    F +++ + + 
Sbjct: 63  INSLLEHHRKGAVRWPLFRWLSLGILLGAALGALTAALIQGPLLQKIIGTFAIVIAVQLA 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R  P      + G V G+ S   G+GGG  T   +++    + +A ATSA  
Sbjct: 123 LDLKPRASRDVPGKPALAVAGGVIGWASAIFGIGGGSLTVPFLVWRSVPMQQAVATSAAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA    L  +++GWG   LP WS+GF+ + A+L I   S+       +L++ +  + 
Sbjct: 183 GLPIAIAGALSFMFTGWGNPNLPQWSVGFIYLPALLGIALTSMFFARFGARLAHRLSPRL 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F++++ +    F
Sbjct: 243 LKRLFALLLLSVGLSF 258


>gi|257092761|ref|YP_003166402.1| hypothetical protein CAP2UW1_1142 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045285|gb|ACV34473.1| protein of unknown function DUF81 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 266

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG-IDDSICMHVAMGTSLGVIAPTS 82
              I     +G  +G+ G+GGGLVMVP L+  F        S  +H+A+GTS+  I  T+
Sbjct: 5   LAYITLGLFTGFFAGMLGIGGGLVMVPALTMMFAAQAAFPGSEILHLALGTSMATILFTA 64

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H RHG +  +++      + + T++ +L  S +    L   F  F  L+ + M+
Sbjct: 65  LASLRAHHRHGAVLWRVVGQITPGILLGTLLGTLFASSIPARPLAIFFTAFVCLVAVQMI 124

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R  P        G+  G LS  + +GGG  T   + +    +  A  TSA V
Sbjct: 125 LNLKPKPSRDLPGAAGVIAVGVGIGALSALVAIGGGSLTVPFLTWCNVRVQHAIGTSAAV 184

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA    L  IY+GWG  GLP WSLG++ + A + ++P S+LI PL  +L++ +    
Sbjct: 185 GFPIAIGGSLGYIYNGWGHPGLPEWSLGYIYLPAFVWLVPSSMLIAPLGARLAHRLPVAT 244

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F++++   +   
Sbjct: 245 LKRLFAVVLIALAAKM 260



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I      G LS L  +GGG + VP L+          ++ +  A+GTS  V  P ++  
Sbjct: 141 VIAVGVGIGALSALVAIGGGSLTVPFLTWC--------NVRVQHAIGTSAAVGFPIAIGG 192

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G I +      +    +   + + +   +  + L + FA+ 
Sbjct: 193 SLGYIYNGWGHPGLPEWSLGYIYLPAFVWLVPSSMLIAPLGARLAHRLPVATLKRLFAVV 252

Query: 134 CLLMGILML 142
            + +   ML
Sbjct: 253 LIALAAKML 261


>gi|148265534|ref|YP_001232240.1| hypothetical protein Gura_3512 [Geobacter uraniireducens Rf4]
 gi|146399034|gb|ABQ27667.1| protein of unknown function DUF81 [Geobacter uraniireducens Rf4]
          Length = 263

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 109/232 (46%), Gaps = 1/232 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VPVL+  F    + +   +H+A+GTSL  I  TS+ S   H   G ++  +++     
Sbjct: 28  VIVPVLTFIFTAQHLPEGHILHLALGTSLASIMFTSISSLRAHHGRGAVDWPVVRRISLG 87

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + + T   S + + +   FL   F +F   +   ML   +    R+ P     +  G + 
Sbjct: 88  IMVGTFGGSWVAAQLSTRFLKVFFVVFLYYVATQMLLNIKPKPHRQLPGQTAMFGVGGLI 147

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  +G+GGG  +   +++   +I++A  TSA +   IA    +  + +G     LPP
Sbjct: 148 GGVSSLVGIGGGSMSVPFLVWCNVAIHRAIGTSAAIGFPIALAGAVGYVVNGLSAP-LPP 206

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +SLGFV + A++ I   SI   P   KL++ +    L   F++++       
Sbjct: 207 YSLGFVYLPALIGIAAASIATAPFGAKLAHSLPIDKLKKIFALLLIVMGTKM 258



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 19/132 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +     L G +S L G+GGG + VP L           ++ +H A+GTS  +  P ++
Sbjct: 138 TAMFGVGGLIGGVSSLVGIGGGSMSVPFLVWC--------NVAIHRAIGTSAAIGFPIAL 189

Query: 84  MSFMEH-----------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
              + +              G + +  L         T    + +   +    L K FA+
Sbjct: 190 AGAVGYVVNGLSAPLPPYSLGFVYLPALIGIAAASIATAPFGAKLAHSLPIDKLKKIFAL 249

Query: 133 FCLLMGILMLKR 144
             ++MG  ML  
Sbjct: 250 LLIVMGTKMLLS 261


>gi|56476420|ref|YP_158009.1| hypothetical protein ebA1817 [Aromatoleum aromaticum EbN1]
 gi|56312463|emb|CAI07108.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 268

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 69/253 (27%), Positives = 115/253 (45%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +V     G  +GL GVGGG +MVPVL+  F   G      +H+A+GTS+  I  TS+ S
Sbjct: 10  YLVLGAFVGFFAGLLGVGGGGIMVPVLTSLFIAQGFSADNVVHLALGTSMAAIVMTSLSS 69

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H RHG +   +++     + + T   + + S V    L   FA F   + + ML   
Sbjct: 70  LRAHHRHGAVRWDVVRSITPGILLGTFAATFIASRVASEPLAIFFAGFMAYVALQMLANI 129

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
           +    R  P        G   G +S  + +GGG  +   M +    ++ A  TSA +   
Sbjct: 130 KPKPSRDLPGLLGMSAVGAGIGGVSALVAIGGGSLSVPFMTWCNVKVHNAIGTSAAIGLP 189

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           IA    +  + +GW   G+P  SLGF+ + A+L++  +S+   P+  KL++ +    L  
Sbjct: 190 IALAGTVGYLVNGWDGTGMPEHSLGFIYLPALLLVSGVSMFTAPVGAKLAHQLPVATLKK 249

Query: 266 GFSMIMFTTSFVF 278
            F+ ++       
Sbjct: 250 VFAGVLILLCAKM 262



 Score = 43.9 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 49/129 (37%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +       G +S L  +GGG + VP ++          ++ +H A+GTS  +  P ++  
Sbjct: 143 MSAVGAGIGGVSALVAIGGGSLSVPFMTWC--------NVKVHNAIGTSAAIGLPIALAG 194

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G I +  L     V   T  V + +   +  + L K FA  
Sbjct: 195 TVGYLVNGWDGTGMPEHSLGFIYLPALLLVSGVSMFTAPVGAKLAHQLPVATLKKVFAGV 254

Query: 134 CLLMGILML 142
            +L+   ML
Sbjct: 255 LILLCAKML 263


>gi|332977620|gb|EGK14388.1| protein of hypothetical function DUF81 [Psychrobacter sp.
           1501(2011)]
          Length = 270

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 1/255 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I   +VA   +G  +GLFG+GGG+++VP L   F   G    I  H+A+GTSL  I  T
Sbjct: 2   MIVWFLVAGAFAGLCAGLFGIGGGMIIVPALVWIFTAYGYSPEIIAHMAVGTSLATIVVT 61

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H + G +   + K+    L + ++V + +   +    L        LL+   M
Sbjct: 62  SISSLTAHNKRGGVRWDVWKNMAIGLVVGSLVGAAIADQIHGLMLQALIGGGALLVAFKM 121

Query: 142 LK-RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           L   ++    +  P   V+   G   G  S   G+GGG  T   + + G  + +A  TSA
Sbjct: 122 LFLSNKENLGKPLPSAPVQVAAGSGIGMASSIFGIGGGSLTVPFLTWAGLPMRQAVGTSA 181

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA        + G  ++ LP  ++GFV++   + I   S +   L  K ++ +  
Sbjct: 182 ACGLPIALAGAAGFAWFGQNVSELPEGAVGFVHVIGFICISIASFITAKLGAKWAHQLPA 241

Query: 261 KYLTIGFSMIMFTTS 275
             L   F +++    
Sbjct: 242 ATLKKAFGVLLVIAG 256



 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 20/128 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + A    G  S +FG+GGG + VP L+ A         + M  A+GTS     P ++   
Sbjct: 141 VAAGSGIGMASSIFGIGGGSLTVPFLTWA--------GLPMRQAVGTSAACGLPIALAGA 192

Query: 87  MEHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
                 G             +++           IT  + +     +  + L KAF +  
Sbjct: 193 AGFAWFGQNVSELPEGAVGFVHVIGFICISIASFITAKLGAKWAHQLPAATLKKAFGVLL 252

Query: 135 LLMGILML 142
           ++ G  +L
Sbjct: 253 VIAGSQLL 260


>gi|254473459|ref|ZP_05086856.1| membrane protein [Pseudovibrio sp. JE062]
 gi|211957575|gb|EEA92778.1| membrane protein [Pseudovibrio sp. JE062]
          Length = 273

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 89/267 (33%), Positives = 157/267 (58%), Gaps = 1/267 (0%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +    ++ +   +I +  L+G L+GLFG+GGG ++VP+L      +G+D    +H+++ +
Sbjct: 3   MISASMLGFGAALIASGALAGFLAGLFGIGGGAILVPILVTILTEVGVDPDAVVHISVAS 62

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           SLGVI PTS+ SF  H++ G +++ +LK WI  +PI  ++ S + + V    L   FA+ 
Sbjct: 63  SLGVIVPTSLRSFFAHKKKGAVDLSLLKSWIIPVPIGVLLASYVAALVSGDTLKGIFAVI 122

Query: 134 CLLMGILMLK-RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
             ++ + ML  R+        P N V+ + G++ GF S  +G+GGG+  N  M  +G  I
Sbjct: 123 AFVVAMRMLFNRESWKLGSDIPGNPVRALIGVMIGFFSTLMGIGGGVMNNTFMTLFGRPI 182

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           ++A ATS+GV  LI+ PA+   + +GWG   LPP+S+G++N+ A+ +I+PI+I + PL  
Sbjct: 183 HQAVATSSGVGVLISIPAVFGMVAAGWGAPNLPPFSVGYINLLAIALIIPITIYVAPLGA 242

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             ++ + K+ L + F + +      FA
Sbjct: 243 HFAHNLPKRKLELAFGVFLLIACARFA 269


>gi|330829877|ref|YP_004392829.1| hypothetical protein B565_2177 [Aeromonas veronii B565]
 gi|328805013|gb|AEB50212.1| hypothetical protein B565_2177 [Aeromonas veronii B565]
          Length = 262

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 75/253 (29%), Positives = 120/253 (47%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            ++    +G L+GLFG+GGGL++VPVL   F+  GID  I  H+A+GTSL  +  T   S
Sbjct: 6   YLLLGAFAGMLAGLFGIGGGLIIVPVLVMTFRAQGIDPEIITHLALGTSLPTMIFTGFSS 65

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              HR  G ++  +++     + I   +  +  + +  S LN     F   M + M    
Sbjct: 66  LRAHREAGAVDWVMIRRLGAGMLIGGWLGGMTANLLSTSTLNIIIGCFAWSMALQMGLNL 125

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
           +   ER  P      I G + G++S   G+GGG  T   + +    +  A A SA  S  
Sbjct: 126 KPTAERHMPGPLGTGIAGTIIGWMSALFGIGGGSLTVPYLSWNSVPMRNAVAASAACSMP 185

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           IA    L  +Y+GW    LP WS+G++ + A+L I+  S     +  KL++ +    L  
Sbjct: 186 IALAGSLSYLYAGWDHADLPEWSVGYIYLPALLGIVLTSTQFARIGAKLAHRLSPTRLKQ 245

Query: 266 GFSMIMFTTSFVF 278
            F+++M      F
Sbjct: 246 AFALLMLLVGAKF 258



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 54/128 (42%), Gaps = 20/128 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +A  + G +S LFG+GGG + VP LS         +S+ M  A+  S     P ++   +
Sbjct: 141 IAGTIIGWMSALFGIGGGSLTVPYLSW--------NSVPMRNAVAASAACSMPIALAGSL 192

Query: 88  EHRRHGTINMKILKDWIFVLPITTV------------VTSLMISHVDKSFLNKAFAIFCL 135
            +   G  +  + +  +  + +  +            + + +   +  + L +AFA+  L
Sbjct: 193 SYLYAGWDHADLPEWSVGYIYLPALLGIVLTSTQFARIGAKLAHRLSPTRLKQAFALLML 252

Query: 136 LMGILMLK 143
           L+G   + 
Sbjct: 253 LVGAKFML 260


>gi|297569567|ref|YP_003690911.1| protein of unknown function DUF81 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925482|gb|ADH86292.1| protein of unknown function DUF81 [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 263

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 106/229 (46%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L  A    G+     MH+A+GTS+  I  T+V S + H R G +  ++++  +  +  
Sbjct: 32  PMLVFALAWQGVAPEYLMHLALGTSMATIIFTAVSSALAHHRRGAVRWEVVRGIVPGILA 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T+  + + + +   FL   FA F   +   ML   +    R+ P        G   G  
Sbjct: 92  GTLGGTFIAAALSTDFLQIFFAFFLYFVAWQMLSGRKPNPARELPGPAGMLGAGGTIGVF 151

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   M++    +++A  TSA +   IA       + +G     LP ++L
Sbjct: 152 SSLVGIGGGTLSVPFMVWCNIGLHQAIGTSAAIGFPIAVAGTAGYLLNGLRAPALPEYAL 211

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           GF+ + A++ I+  S+L  PL  +L++ +    L   F++++   +   
Sbjct: 212 GFIYLPALVGIVAASVLTAPLGVRLAHSLPVNKLKRIFALLLLAVATRM 260



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 20/130 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++ A    G  S L G+GGG + VP +           +I +H A+GTS  +  P +V  
Sbjct: 141 MLGAGGTIGVFSSLVGIGGGTLSVPFMVWC--------NIGLHQAIGTSAAIGFPIAVAG 192

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
              +               G I +  L   +    +T  +   +   +  + L + FA+ 
Sbjct: 193 TAGYLLNGLRAPALPEYALGFIYLPALVGIVAASVLTAPLGVRLAHSLPVNKLKRIFALL 252

Query: 134 CLLMGILMLK 143
            L +   ML 
Sbjct: 253 LLAVATRMLF 262


>gi|311693475|gb|ADP96348.1| membrane protein containing DUF81 [marine bacterium HP15]
          Length = 279

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 75/248 (30%), Positives = 119/248 (47%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   +    L+GT++GLFG+GGGL++VPVL   F L GID  I  H+A+GTSL  I  TS
Sbjct: 21  IASYLALGALAGTVAGLFGIGGGLIIVPVLMFTFGLQGIDPDIIPHLAVGTSLATIVFTS 80

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V S   H +HG +   + +     +    +V +   S +    L     IF +L+G+ M 
Sbjct: 81  VSSIRSHNKHGAVRWDLFRPMTVGIIGGALVGAWTASLMSGRALELVIGIFVILVGLKMF 140

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            +      R  P      + G   G+ S   G+GGG  T   + +    + +A  TSA  
Sbjct: 141 FQVDPKPGRDVPGVAGLGVAGGFIGWGSAIFGIGGGTLTVPYLSWCNVRMQQAVGTSAAC 200

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA    L  I++GW    +P  S GF+ + A++ I+  S+    +   L++ +  + 
Sbjct: 201 GLPIAVSGALGNIWTGWHHPAVPELSAGFIYLPALIGIILTSVFFARVGANLAHRLNPQI 260

Query: 263 LTIGFSMI 270
           L   FS++
Sbjct: 261 LKRTFSIM 268



 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 43/116 (37%), Gaps = 20/116 (17%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME--- 88
             G  S +FG+GGG + VP LS          ++ M  A+GTS     P +V   +    
Sbjct: 163 FIGWGSAIFGIGGGTLTVPYLSWC--------NVRMQQAVGTSAACGLPIAVSGALGNIW 214

Query: 89  ---HR------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
              H         G I +  L   I        V + +   ++   L + F+I  L
Sbjct: 215 TGWHHPAVPELSAGFIYLPALIGIILTSVFFARVGANLAHRLNPQILKRTFSIMLL 270


>gi|301166197|emb|CBW25772.1| hypothetical integral membrane protein [Bacteriovorax marinus SJ]
          Length = 262

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 76/255 (29%), Positives = 131/255 (51%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            + +     +GTLSGLFG+GGGLV+VP L   F+ +G    I +H+A+GTSL +I  T+ 
Sbjct: 4   LIYLFLGVFAGTLSGLFGIGGGLVIVPTLLFCFKYLGFSPEIAIHMAIGTSLSIIVVTAT 63

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S   H++   I+ ++ K   F L I T    ++ S +  SFL   F+++ +L+ I M  
Sbjct: 64  NSVYGHQKRKGIDWQVFKKIFFPLVIGTYFGGMISSKLSASFLEIVFSVYVVLVSIKMFL 123

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             ++   +K     +    G + GF S  LG+GGG  +   + + G S+ KA   SA + 
Sbjct: 124 DVKVDKVQKETSLILYSFVGALIGFKSAILGIGGGTISIPFLSWRGFSMKKAVGVSAALG 183

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
             I+    +  I SG  + GLP  SLG++ + A + ++  S     +  KLS+ + ++ +
Sbjct: 184 LPISIVGSISYIVSGLKVQGLPEHSLGYIYLPAFIGVIITSSFFAHIGAKLSHRLPQQKM 243

Query: 264 TIGFSMIMFTTSFVF 278
             GF++ +   +   
Sbjct: 244 KKGFAIFLSIVAIKM 258



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 20/133 (15%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L      L G  S + G+GGG + +P LS             M  A+G S  +  P S
Sbjct: 136 LILYSFVGALIGFKSAILGIGGGTISIPFLSW--------RGFSMKKAVGVSAALGLPIS 187

Query: 83  VMSFMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           ++  + +               G I +      I        + + +   + +  + K F
Sbjct: 188 IVGSISYIVSGLKVQGLPEHSLGYIYLPAFIGVIITSSFFAHIGAKLSHRLPQQKMKKGF 247

Query: 131 AIFCLLMGILMLK 143
           AIF  ++ I M+ 
Sbjct: 248 AIFLSIVAIKMIF 260


>gi|262372627|ref|ZP_06065906.1| transmembrane protein [Acinetobacter junii SH205]
 gi|262312652|gb|EEY93737.1| transmembrane protein [Acinetobacter junii SH205]
          Length = 280

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 3/276 (1%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           +   S+  F+ +  +V+ I  + +   L+G  +GLFGVGGGL++VP+L   F  MG    
Sbjct: 1   MSQLSIHPFILRKYLVELIIFLAI-GALAGFAAGLFGVGGGLIIVPLLYIVFTQMGYQPD 59

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           + MH+A+GTSL  I  TS+ S + H ++  +   + K+    L + + + + +   +  +
Sbjct: 60  VIMHMALGTSLATIIVTSISSLIAHNKNSAVIWPVFKNLTPGLILGSFLGAGIAGLLSGA 119

Query: 125 FLNKAFAIFCLLMGILMLKRDR--LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            L     IF + +   M    +  +   +  P    +   G   G  S   G+GGG  T 
Sbjct: 120 NLQLIIGIFVIWVAYKMFFGAKNVIDQGKVLPSTTRQIFAGTGIGVASAIFGIGGGSLTV 179

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
             +  YG  + KA  TSA     IA    L  I+ G   +   P ++GFV+I A L I  
Sbjct: 180 PYLNHYGVVMQKAVGTSAACGLPIAIAGALGFIFFGMKQHINVPNTIGFVHIYAFLGISI 239

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +S +   L  K ++++    L   F++++      F
Sbjct: 240 MSFMTAKLGAKTAHILSPIVLKKCFALMLLIVGCFF 275



 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I A    G  S +FG+GGG + VP L+           + M  A+GTS     P ++   
Sbjct: 157 IFAGTGIGVASAIFGIGGGSLTVPYLNHY--------GVVMQKAVGTSAACGLPIAIAGA 208

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G +++        +  +T  + +     +    L K FA+  
Sbjct: 209 LGFIFFGMKQHINVPNTIGFVHIYAFLGISIMSFMTAKLGAKTAHILSPIVLKKCFALML 268

Query: 135 LLMGILMLKR 144
           L++G   L +
Sbjct: 269 LIVGCFFLYK 278


>gi|323700683|ref|ZP_08112595.1| protein of unknown function DUF81 [Desulfovibrio sp. ND132]
 gi|323460615|gb|EGB16480.1| protein of unknown function DUF81 [Desulfovibrio desulfuricans
           ND132]
          Length = 266

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 62/229 (27%), Positives = 102/229 (44%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L+ AF+          H+A+GTS+  I  TS+ S   H + G IN          + I
Sbjct: 32  PMLNFAFEWQHFPMEHIQHIALGTSMATIIFTSISSMRAHHKRGAINYTAFWRLAPGIII 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T + S + S +  +FL   F +F   +   ML   +     + P     +  G   G  
Sbjct: 92  GTYLGSWIASLLSTTFLKIFFGLFLYYVATQMLLNIKPKAAHELPGKAGTFAAGSGIGVF 151

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  T   + +   +++ A AT+A V   IA       I +GW + G+P   +
Sbjct: 152 SALVGIGGGTLTVPFLSWCNLTMHAAIATAAAVGLPIALAGTTGYIVNGWSVQGIPGPHI 211

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V I A+L I+  S L  P   KL++ +    L   F++++F      
Sbjct: 212 GYVYIPALLGIIVTSTLTAPFGAKLAHSLPVTKLKKIFAILLFLVGTRM 260



 Score = 43.9 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSLGVIAPTS 82
             A    G  S L G+GGG + VP LS     M    +    + + +A+  + G I    
Sbjct: 142 FAAGSGIGVFSALVGIGGGTLTVPFLSWCNLTMHAAIATAAAVGLPIALAGTTGYIVNGW 201

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +     G + +  L   I    +T    + +   +  + L K FAI   L+G  ML
Sbjct: 202 SVQGIPGPHIGYVYIPALLGIIVTSTLTAPFGAKLAHSLPVTKLKKIFAILLFLVGTRML 261

Query: 143 KR 144
            +
Sbjct: 262 YK 263


>gi|220905134|ref|YP_002480446.1| hypothetical protein Ddes_1872 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869433|gb|ACL49768.1| protein of unknown function DUF81 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 265

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 67/230 (29%), Positives = 102/230 (44%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P++   F  +G+       +A+GTSL  I  TS+ S   H + G ++  I ++    + +
Sbjct: 32  PMMVAIFPTVGVPAEYVQQMALGTSLASIMITSISSARAHNKRGAVHWDIFRNITPGILL 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T    L+ +H+    L   F  F +++   ML   R    R  P        G+  G L
Sbjct: 92  GTFAGGLIATHMPTLALKVIFICFLVVVAAQMLSGYRPPATRSMPGFAGTSGVGLGIGLL 151

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   M      ++ A  TSA +   IA    L  I  GWG   LP  +L
Sbjct: 152 SSFVGIGGGTISVPFMTTCNVPLHHAVGTSAAIGFPIAVAGTLGYIVGGWGRPDLPSMAL 211

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           GFVN+ A+L I   S L  PL  KLS+ +    L  GF+  +   +   A
Sbjct: 212 GFVNLWALLGIASASFLTAPLGVKLSHALPADKLKRGFACFLIIVAARMA 261


>gi|221369184|ref|YP_002520280.1| hypothetical protein RSKD131_3347 [Rhodobacter sphaeroides KD131]
 gi|221162236|gb|ACM03207.1| Hypothetical Protein RSKD131_3347 [Rhodobacter sphaeroides KD131]
          Length = 277

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 89/268 (33%), Positives = 142/268 (52%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  LS   +   I  +  A  ++G L+GLFG+GGG + VPV  + F+L+G D  + M +A
Sbjct: 1   MELLSSGTIFALIAALAAAGAVTGFLAGLFGIGGGAISVPVFFEVFRLLGHDPEVAMPLA 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL VI PTS++S   H + GT++  +LK W   + I   + S + S          F
Sbjct: 61  VGTSLAVIVPTSLVSAYGHLQRGTVDKDLLKVWALPILIGVALGSALASVAPPRLFQGVF 120

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
               LL+   +L   +       P   +  ++G V G +S  +G+GGG  +NL++  +G 
Sbjct: 121 VCVALLIATKLLTGGKWRLSEGLPRRAILRLYGAVVGLVSALMGIGGGAVSNLILTLHGV 180

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            I++A +T+AGV  LIA P  +  + +GWG   LPP +LGFV++   L+ +P SIL T  
Sbjct: 181 PIHRAVSTAAGVGVLIAVPGTIGYMIAGWGRPDLPPDALGFVSVATFLLTIPTSILTTRF 240

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              L++ + K++L   F   +      F
Sbjct: 241 GVALAHRLSKEWLARSFGCFLLIVCARF 268



 Score = 38.5 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 12/127 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +   + G +S L G+GGG V     +    L G+     +  A G  + +  P ++
Sbjct: 147 AILRLYGAVVGLVSALMGIGGGAVS----NLILTLHGVPIHRAVSTAAGVGVLIAVPGTI 202

Query: 84  MSFMEHRRH--------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
              +             G +++      I    +TT     +   + K +L ++F  F L
Sbjct: 203 GYMIAGWGRPDLPPDALGFVSVATFLLTIPTSILTTRFGVALAHRLSKEWLARSFGCFLL 262

Query: 136 LMGILML 142
           ++    L
Sbjct: 263 IVCARFL 269


>gi|262163915|ref|ZP_06031654.1| hypothetical protein VMA_000355 [Vibrio mimicus VM223]
 gi|262027443|gb|EEY46109.1| hypothetical protein VMA_000355 [Vibrio mimicus VM223]
          Length = 264

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 104/229 (45%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       G+   I M +A+ TSL  I  TS  S + H + G +++ ++K  +  + I
Sbjct: 33  PALLFLLPYAGVSAEITMQLALATSLATIILTSGSSALNHLKLGNVDLFVVKWLMPGVVI 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
                S +   +   +L K F +    + + M +  R+      P+++V  + G   G +
Sbjct: 93  GGFFGSAVAEWIPSQYLPKVFGVIVFCLSVQMYRSIRMQQHHPMPNSFVTTLCGTGIGVV 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S   G+GGG  +   +  +G  + KA  +S+     IA   ++  I  G+ +  LP +S+
Sbjct: 153 SSLAGIGGGSLSVPFLNRHGIEMKKAVGSSSVCGFAIAISGMIGFILHGYQVENLPQYSI 212

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V + A+L I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 213 GYVYVPALLAIATTSMLTTRIGAKLATQMPTARLKKFFAIFLMCVAATM 261



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 20/127 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME- 88
               G +S L G+GGG + VP L++          I M  A+G+S       ++   +  
Sbjct: 146 GTGIGVVSSLAGIGGGSLSVPFLNR--------HGIEMKKAVGSSSVCGFAIAISGMIGF 197

Query: 89  -----------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G + +  L        +TT + + + + +  + L K FAIF + +
Sbjct: 198 ILHGYQVENLPQYSIGYVYVPALLAIATTSMLTTRIGAKLATQMPTARLKKFFAIFLMCV 257

Query: 138 GILMLKR 144
              ML +
Sbjct: 258 AATMLFQ 264


>gi|91776589|ref|YP_546345.1| hypothetical protein Mfla_2237 [Methylobacillus flagellatus KT]
 gi|91710576|gb|ABE50504.1| protein of unknown function DUF81 [Methylobacillus flagellatus KT]
          Length = 263

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 73/256 (28%), Positives = 121/256 (47%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L ++A   +G LSGL GVGGG V+VP+L   F  +       MH+A+GTSL  I  TS
Sbjct: 3   LILYLIAGAGAGILSGLLGVGGGTVIVPILVFIFTSLAFPPQHIMHIALGTSLATIIVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H R   ++   ++     + I T++ +++   +D   L   FA+F LL+   M+
Sbjct: 63  ISSARAHHRKQNVHWSAVRLIAPGIVIGTLLGAVLAGQLDTVILKVIFAVFVLLIATQMV 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
                   R+ P        G + G LS  +G+GGG  +   +++   +   A  TSA +
Sbjct: 123 LNFTPAPHRQLPGRAGTLSMGGIIGVLSSLVGIGGGSLSVPFLIYCNFNARYAIGTSAAI 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA    L  I +G     LP +SLG+V + A   I   S+L  P    L++ +  + 
Sbjct: 183 GLPIAVAGTLGFIITGLSQGNLPAYSLGYVYLPAFAGIALASMLTAPFGAYLAHKLPVQV 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F+++++      
Sbjct: 243 LKKLFALLLYIVGIKM 258



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 4/120 (3%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +    + G LS L G+GGG + VP L      A   +G   +I + +A+  +LG I    
Sbjct: 140 LSMGGIIGVLSSLVGIGGGSLSVPFLIYCNFNARYAIGTSAAIGLPIAVAGTLGFIITGL 199

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               +     G + +           +T    + +   +    L K FA+   ++GI ML
Sbjct: 200 SQGNLPAYSLGYVYLPAFAGIALASMLTAPFGAYLAHKLPVQVLKKLFALLLYIVGIKML 259


>gi|77465186|ref|YP_354689.1| hypothetical protein RSP_3172 [Rhodobacter sphaeroides 2.4.1]
 gi|77389604|gb|ABA80788.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
          Length = 277

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 89/268 (33%), Positives = 142/268 (52%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  LS   +   I  +  A  ++G L+GLFG+GGG + VPV  + F+L+G D  + M +A
Sbjct: 1   MELLSSGTIFALIAALAAAGAVTGFLAGLFGIGGGAISVPVFFEVFRLLGHDPEVAMPLA 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL VI PTS++S   H + GT++  +LK W   + I   + S + S          F
Sbjct: 61  VGTSLAVIVPTSLVSAYGHLQRGTVDKDLLKVWALPILIGVALGSALASVAPPRLFQGVF 120

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
               LL+   +L   +       P   +  ++G V G +S  +G+GGG  +NL++  +G 
Sbjct: 121 VCVALLIATKLLTGGKWRLSEGLPRRAILRLYGAVVGLVSALMGIGGGAVSNLILTLHGV 180

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            I++A +T+AGV  LIA P  +  + +GWG   LPP +LGFV++   L+ +P SIL T  
Sbjct: 181 PIHRAVSTAAGVGVLIAVPGTIGYMIAGWGRPDLPPDALGFVSVATFLLTIPTSILTTRF 240

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              L++ + K++L   F   +      F
Sbjct: 241 GVALAHRLSKEWLARSFGCFLLLVCARF 268



 Score = 38.5 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 48/127 (37%), Gaps = 12/127 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +   + G +S L G+GGG V     +    L G+     +  A G  + +  P ++
Sbjct: 147 AILRLYGAVVGLVSALMGIGGGAVS----NLILTLHGVPIHRAVSTAAGVGVLIAVPGTI 202

Query: 84  MSFMEHRRH--------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
              +             G +++      I    +TT     +   + K +L ++F  F L
Sbjct: 203 GYMIAGWGRPDLPPDALGFVSVATFLLTIPTSILTTRFGVALAHRLSKEWLARSFGCFLL 262

Query: 136 LMGILML 142
           L+    L
Sbjct: 263 LVCARFL 269


>gi|303325752|ref|ZP_07356195.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
 gi|302863668|gb|EFL86599.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
          Length = 265

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 70/229 (30%), Positives = 102/229 (44%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L   F   G+       +A+GTSL  I  TS+ S   H   G ++  I ++    + +
Sbjct: 32  PMLVAIFPGQGVPPEYVQQMALGTSLASIMITSISSARAHNARGAVHWDIFRNITPGILV 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T V  L+ +H+   FL   F  F  ++   ML   R    R  P        G V G +
Sbjct: 92  GTFVGGLVATHMPTMFLKIFFICFLFVVSAQMLSNYRPPASRDMPGALGTAGVGGVIGLV 151

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   M F    ++ A  TSA +   IA    L  I  GWG   LP  SL
Sbjct: 152 SSFVGIGGGTLSVPFMSFCNVPLHHAVGTSAAIGFPIAVAGTLGYIIGGWGRPDLPALSL 211

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           GFVN+ A+L +   S L  PL  KLS+ +    L  GF++ +   +   
Sbjct: 212 GFVNLWALLGLAAASYLTAPLGAKLSHALPTAKLKRGFAVFLILVALKM 260



 Score = 48.9 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 20/126 (15%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
              + G +S   G+GGG + VP +S          ++ +H A+GTS  +  P +V   + 
Sbjct: 144 VGGVIGLVSSFVGIGGGTLSVPFMSFC--------NVPLHHAVGTSAAIGFPIAVAGTLG 195

Query: 89  HR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           +               G +N+  L        +T  + + +   +  + L + FA+F +L
Sbjct: 196 YIIGGWGRPDLPALSLGFVNLWALLGLAAASYLTAPLGAKLSHALPTAKLKRGFAVFLIL 255

Query: 137 MGILML 142
           + + ML
Sbjct: 256 VALKML 261


>gi|126464647|ref|YP_001045760.1| hypothetical protein Rsph17029_3910 [Rhodobacter sphaeroides ATCC
           17029]
 gi|126106458|gb|ABN78988.1| protein of unknown function DUF81 [Rhodobacter sphaeroides ATCC
           17029]
          Length = 277

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 87/268 (32%), Positives = 142/268 (52%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  LS   +   I  +  A  ++G L+GLFG+GGG + VPV  + F+L+G D  + M +A
Sbjct: 1   MELLSSGTIFALIAALAAAGAVTGFLAGLFGIGGGAISVPVFFEVFRLLGHDPEVAMPLA 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL VI PTS++S   H + GT++  +L+ W   + I   + S + S          F
Sbjct: 61  VGTSLAVIVPTSLVSAYGHLQRGTVDKDLLRVWTLPILIGVALGSALASVAPPRLFQGVF 120

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
               L++   +L   +       P   +  ++G V G +S  +G+GGG  +NL++  +G 
Sbjct: 121 VCVALVIATKLLTGGKWRLSEGLPRRAILRLYGAVVGLVSALMGIGGGAVSNLILTLHGV 180

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            I++A +T+AGV  LIA P  +  + +GWG   LPP +LGFV++   L+ +P SIL T  
Sbjct: 181 PIHRAVSTAAGVGVLIAVPGTIGYMIAGWGRPDLPPDALGFVSVATFLLTIPTSILTTRF 240

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              L++ + K++L   F   +      F
Sbjct: 241 GVALAHRLSKEWLARSFGCFLLLVCARF 268



 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 48/127 (37%), Gaps = 12/127 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +   + G +S L G+GGG V     +    L G+     +  A G  + +  P ++
Sbjct: 147 AILRLYGAVVGLVSALMGIGGGAVS----NLILTLHGVPIHRAVSTAAGVGVLIAVPGTI 202

Query: 84  MSFMEHRRH--------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
              +             G +++      I    +TT     +   + K +L ++F  F L
Sbjct: 203 GYMIAGWGRPDLPPDALGFVSVATFLLTIPTSILTTRFGVALAHRLSKEWLARSFGCFLL 262

Query: 136 LMGILML 142
           L+    L
Sbjct: 263 LVCARFL 269


>gi|262172250|ref|ZP_06039928.1| hypothetical protein VII_003077 [Vibrio mimicus MB-451]
 gi|261893326|gb|EEY39312.1| hypothetical protein VII_003077 [Vibrio mimicus MB-451]
          Length = 264

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 104/229 (45%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       G+   I M +A+ TSL  I  TS  S + H + G +++ ++K  +  + I
Sbjct: 33  PALLFLLPYAGVSAEITMQLALATSLATIILTSGSSALNHLKLGNVDLFVVKWLMPGVVI 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
                S +   +   +L K F +    + + M +  R+      P+++V  + G   G +
Sbjct: 93  GGFFGSAVAEWIPSQYLPKVFGVIVFCLSVQMYRSIRMQHHHPMPNSFVTTLCGTGIGVV 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S   G+GGG  +   +  +G  + KA  +S+     IA   ++  I  G+ +  LP +S+
Sbjct: 153 SSLAGIGGGSLSVPFLNRHGIEMKKAVGSSSVCGFAIAISGMIGFILHGYQVENLPQYSI 212

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V + A+L I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 213 GYVYVPALLAIATTSMLTTRIGAKLATQMPTARLKKFFAIFLMCVAATM 261



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 20/127 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME- 88
               G +S L G+GGG + VP L++          I M  A+G+S       ++   +  
Sbjct: 146 GTGIGVVSSLAGIGGGSLSVPFLNR--------HGIEMKKAVGSSSVCGFAIAISGMIGF 197

Query: 89  -----------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G + +  L        +TT + + + + +  + L K FAIF + +
Sbjct: 198 ILHGYQVENLPQYSIGYVYVPALLAIATTSMLTTRIGAKLATQMPTARLKKFFAIFLMCV 257

Query: 138 GILMLKR 144
              ML +
Sbjct: 258 AATMLFQ 264


>gi|46581187|ref|YP_011995.1| hypothetical protein DVU2783 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120601579|ref|YP_965979.1| hypothetical protein Dvul_0529 [Desulfovibrio vulgaris DP4]
 gi|46450608|gb|AAS97255.1| membrane protein, putative [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120561808|gb|ABM27552.1| protein of unknown function DUF81 [Desulfovibrio vulgaris DP4]
 gi|311234858|gb|ADP87712.1| protein of unknown function DUF81 [Desulfovibrio vulgaris RCH1]
          Length = 266

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 1/232 (0%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK-ILKDWIFV 106
           +VP+L+ AF L  I D    H+A+GTSLG I  TSV SF  H + G +  + ++      
Sbjct: 30  IVPMLNFAFALEHIPDQFIQHLALGTSLGSIMFTSVSSFRAHHKRGAVLWREVVFRITPG 89

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           +   T++ S + + +  SFL   F  F   +   ML   +    R+ P +   +  G V 
Sbjct: 90  IITGTLLGSWVAAGLSTSFLKGFFVCFLYWVAAQMLLNLKPKASRELPGSGGMFGMGNVI 149

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  +G+GGG  +   M +    ++ A  TSA +   IA    +  I +G  + GLP 
Sbjct: 150 GVVSSLVGIGGGTLSVPFMAWCNVPMHTAIGTSAAIGFPIAVAGTVGYIVNGLAVAGLPE 209

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            + GF+++ A++ I+  S+   PL  +L++ +    L   F++++       
Sbjct: 210 NTFGFIHVPALIGIVGASVFTAPLGARLAHSLPVARLKRIFAVLLLVMGTRM 261



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 20/125 (16%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             + G +S L G+GGG + VP ++          ++ MH A+GTS  +  P +V   + +
Sbjct: 146 GNVIGVVSSLVGIGGGTLSVPFMAWC--------NVPMHTAIGTSAAIGFPIAVAGTVGY 197

Query: 90  ------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G I++  L   +     T  + + +   +  + L + FA+  L+M
Sbjct: 198 IVNGLAVAGLPENTFGFIHVPALIGIVGASVFTAPLGARLAHSLPVARLKRIFAVLLLVM 257

Query: 138 GILML 142
           G  ML
Sbjct: 258 GTRML 262


>gi|237654159|ref|YP_002890473.1| hypothetical protein Tmz1t_3502 [Thauera sp. MZ1T]
 gi|237625406|gb|ACR02096.1| protein of unknown function DUF81 [Thauera sp. MZ1T]
          Length = 268

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 66/251 (26%), Positives = 113/251 (45%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V     G  +GL GVGGG +MVP+L+  F   G   S  +H+A+GTS+  I  TSV S  
Sbjct: 12  VLGAAVGFFAGLLGVGGGGIMVPMLTTFFLAQGFPQSQVVHMALGTSMAAIVLTSVSSLR 71

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            H   G +   +++     + + T   + + + V    L   FA+F   + I ML   + 
Sbjct: 72  AHHARGAVRWDVVRAITPGILVGTFAATFIAARVSTVPLAIFFAVFMAYVSIQMLLNIKP 131

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
              R+ P        G+  G +S  + +GGG  +   M +    +  A  TSA +   IA
Sbjct: 132 KPARELPGALGMSAAGLGIGGVSALVAIGGGSLSVPFMTWCNVKMQNAIGTSAAIGLPIA 191

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
               +  + +GWG   +P  + G+V + A++++  +S    PL  KL++ +    L   F
Sbjct: 192 LAGTVGYLVNGWGAPDMPALTFGYVYLPALVLVSVVSTFFAPLGAKLAHRLPVATLKKVF 251

Query: 268 SMIMFTTSFVF 278
           + ++       
Sbjct: 252 AGMLVLLCAKM 262



 Score = 39.3 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 48/129 (37%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +  A    G +S L  +GGG + VP ++          ++ M  A+GTS  +  P ++  
Sbjct: 143 MSAAGLGIGGVSALVAIGGGSLSVPFMTWC--------NVKMQNAIGTSAAIGLPIALAG 194

Query: 86  FMEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G + +  L     V      + + +   +  + L K FA  
Sbjct: 195 TVGYLVNGWGAPDMPALTFGYVYLPALVLVSVVSTFFAPLGAKLAHRLPVATLKKVFAGM 254

Query: 134 CLLMGILML 142
            +L+   ML
Sbjct: 255 LVLLCAKML 263


>gi|293604356|ref|ZP_06686763.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292817233|gb|EFF76307.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 273

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 126/260 (48%), Gaps = 1/260 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  +  ++V   + G  +GL G+GGG+++VP L+  F   G+   + +H A+ TS+  I 
Sbjct: 3   VSMVICLLVLGAVVGFAAGLLGIGGGMLLVPFLTMLFAWQGMPPELVVHAAIATSMTSIL 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV-TSLMISHVDKSFLNKAFAIFCLLMG 138
            TS+ S   H++ GTI   I+      + I  +V    + + +   +L+  FA+F    G
Sbjct: 63  FTSISSVRAHQQRGTIKWNIVWAMAPGIIIGGLVSGGAVFAALSTLWLSLFFALFVGYSG 122

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             ML+  +    R+ P        G   GFLSG +G GGG  +   M++   +++ A +T
Sbjct: 123 WSMLRNKKPKPARQMPGVVGTSAAGAGIGFLSGLVGAGGGFLSVPFMVWCNVALHNAVST 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           SA +   IA    +  + SG       P  LG++   A+L ++  S+L  PL  ++++ +
Sbjct: 183 SAALGFPIALANSVGYVVSGLNEGTSRPGMLGYIYWPALLALVCTSVLTAPLGARMAHRL 242

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
             + L   F+ ++F  +   
Sbjct: 243 PVQTLKRVFACLLFALAAYM 262



 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
            A    G LSGL G GGG + VP +           ++ +H A+ TS  +  P ++ + +
Sbjct: 145 AAGAGIGFLSGLVGAGGGFLSVPFMVWC--------NVALHNAVSTSAALGFPIALANSV 196

Query: 88  EHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            +               G I    L   +    +T  + + M   +    L + FA    
Sbjct: 197 GYVVSGLNEGTSRPGMLGYIYWPALLALVCTSVLTAPLGARMAHRLPVQTLKRVFACLLF 256

Query: 136 LMGILMLKR 144
            +   ML +
Sbjct: 257 ALAAYMLFK 265


>gi|258624713|ref|ZP_05719647.1| UPF0721 transmembrane protein [Vibrio mimicus VM603]
 gi|258583000|gb|EEW07815.1| UPF0721 transmembrane protein [Vibrio mimicus VM603]
          Length = 264

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 103/229 (44%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       G+   I M +A+ TSL  I  TS  S + H + G +++ ++K  +  + I
Sbjct: 33  PALLFLLPYAGVSAEITMQLALATSLATIILTSGSSALNHLKLGNVDLFVVKWLMPGVVI 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
                S +   +   +L K F +    + + M +  R+      P+ +V  + G   G +
Sbjct: 93  GGFFGSAVAEWIPSQYLPKVFGVIVFCLSVQMYRSIRMQQHHPMPNAFVTTVCGTGIGVV 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S   G+GGG  +   +  +G  + KA  +S+     IA   ++  I  G+ +  LP +S+
Sbjct: 153 SSLAGIGGGSLSVPFLNRHGIEMKKAVGSSSVCGFAIAISGMIGFILHGYQVENLPQYSI 212

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V + A+L I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 213 GYVYVPALLAIATTSMLTTRIGAKLATQMPTARLKKFFAIFLMCVAATM 261



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V     G +S L G+GGG + VP L++          I M  A+G+S       ++   +
Sbjct: 144 VCGTGIGVVSSLAGIGGGSLSVPFLNR--------HGIEMKKAVGSSSVCGFAIAISGMI 195

Query: 88  E------------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                            G + +  L        +TT + + + + +  + L K FAIF +
Sbjct: 196 GFILHGYQVENLPQYSIGYVYVPALLAIATTSMLTTRIGAKLATQMPTARLKKFFAIFLM 255

Query: 136 LMGILMLKR 144
            +   ML +
Sbjct: 256 CVAATMLFQ 264


>gi|148652278|ref|YP_001279371.1| hypothetical protein PsycPRwf_0466 [Psychrobacter sp. PRwf-1]
 gi|148571362|gb|ABQ93421.1| protein of unknown function DUF81 [Psychrobacter sp. PRwf-1]
          Length = 270

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 68/255 (26%), Positives = 114/255 (44%), Gaps = 1/255 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I   ++A   +G  +GLFGVGGG+++VP L   F   G    I  H+A+GTSL  I  T
Sbjct: 2   MILWFLLAGTFAGVCAGLFGVGGGMIIVPALVWMFTAYGYSPDIIAHLAVGTSLATIMVT 61

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H + G +  ++ K+    L + +++ + +   ++   L     +  LL+   M
Sbjct: 62  SISSLTAHHKRGGVRWEVWKNMAIGLVVGSLLGAAVADQMNGLMLQALIGVAALLVAFKM 121

Query: 142 LK-RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           L   ++    R  P   V+   G   G  S   G+GGG  T   + + G  + +A  TSA
Sbjct: 122 LFLSNKENLGRPLPSAPVQIGAGSGIGMASAIFGIGGGSLTVPFLTWAGLPMRQAVGTSA 181

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA        + G  + GLP  ++GFV++   + I   S +   L  K ++ +  
Sbjct: 182 ACGLPIALAGAAGFAWFGQDVVGLPSGAIGFVHVTGFICISIASFITAKLGAKWAHQLPA 241

Query: 261 KYLTIGFSMIMFTTS 275
             L  GF  ++    
Sbjct: 242 ATLKKGFGALLVIAG 256



 Score = 40.4 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 20/128 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I A    G  S +FG+GGG + VP L+ A         + M  A+GTS     P ++   
Sbjct: 141 IGAGSGIGMASAIFGIGGGSLTVPFLTWA--------GLPMRQAVGTSAACGLPIALAGA 192

Query: 87  MEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
                             G +++           IT  + +     +  + L K F    
Sbjct: 193 AGFAWFGQDVVGLPSGAIGFVHVTGFICISIASFITAKLGAKWAHQLPAATLKKGFGALL 252

Query: 135 LLMGILML 142
           ++ G  +L
Sbjct: 253 VIAGSQLL 260


>gi|83648499|ref|YP_436934.1| permease [Hahella chejuensis KCTC 2396]
 gi|83636542|gb|ABC32509.1| predicted Permease [Hahella chejuensis KCTC 2396]
          Length = 266

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 106/230 (46%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L  +F+L G+  S+  H+A+GTSL  I  TS+ S   H +   +N ++ +     L 
Sbjct: 29  VPALIFSFELQGVAPSVATHLAVGTSLATIIFTSINSIRAHHQKQGVNWRVFRPMAVGLM 88

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           +  V+ +   S +  + L     IF + +G+ M    +    R  P + V    G   G+
Sbjct: 89  VGAVLGAQTASLMPAAQLKLVIGIFAITIGVQMALALKPKPHRSLPGSGVLVGVGGGIGW 148

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
            S   G+GGG  +   + +    + +A  TSA     IA    +  I+ GWG   LP +S
Sbjct: 149 ASAIFGIGGGSLSVPYLTWCNVRMQQAVGTSAACGLPIALMGAITNIWEGWGEAALPEYS 208

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           LGF+ + A+  I   S+    L  KL++ +    L   FS+++F     F
Sbjct: 209 LGFIYLPALAGIAITSMPFASLGAKLAHRLPGDVLKRIFSVLLFIVGGRF 258



 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 20/121 (16%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH------ 89
            S +FG+GGG + VP L+          ++ M  A+GTS     P ++M  + +      
Sbjct: 149 ASAIFGIGGGSLSVPYLTWC--------NVRMQQAVGTSAACGLPIALMGAITNIWEGWG 200

Query: 90  ------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G I +  L            + + +   +    L + F++   ++G   L 
Sbjct: 201 EAALPEYSLGFIYLPALAGIAITSMPFASLGAKLAHRLPGDVLKRIFSVLLFIVGGRFLY 260

Query: 144 R 144
           +
Sbjct: 261 Q 261


>gi|117619625|ref|YP_856616.1| hypothetical protein AHA_2086 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561032|gb|ABK37980.1| putative membrane protein [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 262

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 74/253 (29%), Positives = 120/253 (47%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            ++    +G L+GLFG+GGGL++VPVL  +F   G+   I  H+A+GTSL  +  T   S
Sbjct: 6   YLLLGAFAGMLAGLFGIGGGLIIVPVLVLSFHAQGVAPDIITHLALGTSLPTMIFTGFSS 65

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H+  G ++  +++     + +   +  +  + +  S LN     F   M + M    
Sbjct: 66  LRAHQEAGAVDWVMIRRLGAGMLVGAWLGGMTANLLSASTLNIIIGCFAWTMALQMGLNL 125

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
           +   ER  P      I G V G++S   G+GGG  T   + +    +  A A SA  S  
Sbjct: 126 KPKAERHLPGALGTGIAGTVIGWMSALFGIGGGSLTVPYLSWNSVPMRNAVAASAACSMP 185

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           IA    L  +Y+GW    LP WSLGF+ + A+L I+  S     +  KL++ +  + L  
Sbjct: 186 IALAGSLSYLYAGWNNPDLPEWSLGFIYLPALLGIVLTSTQFARVGAKLAHRLSPQRLKQ 245

Query: 266 GFSMIMFTTSFVF 278
            F+++M      F
Sbjct: 246 AFALLMLLVGAKF 258



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 53/128 (41%), Gaps = 20/128 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +A  + G +S LFG+GGG + VP LS         +S+ M  A+  S     P ++   +
Sbjct: 141 IAGTVIGWMSALFGIGGGSLTVPYLSW--------NSVPMRNAVAASAACSMPIALAGSL 192

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVT------------SLMISHVDKSFLNKAFAIFCL 135
            +   G  N  + +  +  + +  ++             + +   +    L +AFA+  L
Sbjct: 193 SYLYAGWNNPDLPEWSLGFIYLPALLGIVLTSTQFARVGAKLAHRLSPQRLKQAFALLML 252

Query: 136 LMGILMLK 143
           L+G   + 
Sbjct: 253 LVGAKFML 260


>gi|332560791|ref|ZP_08415109.1| hypothetical protein RSWS8N_17134 [Rhodobacter sphaeroides WS8N]
 gi|332274589|gb|EGJ19905.1| hypothetical protein RSWS8N_17134 [Rhodobacter sphaeroides WS8N]
          Length = 277

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 88/268 (32%), Positives = 142/268 (52%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  LS   +   I  +  A  ++G L+GLFG+GGG + VPV  + F+L+G D  + M +A
Sbjct: 1   MELLSSGTIFALIAALAAAGAVTGFLAGLFGIGGGAISVPVFFEVFRLLGHDPEVAMPLA 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL VI PTS++S   H + GT++  +LK W   + +   + S + S          F
Sbjct: 61  VGTSLAVIVPTSLVSAYGHLQRGTVDKDLLKVWALPILVGVALGSALASVAPPRLFQGVF 120

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
               LL+   +L   +       P   +  ++G V G +S  +G+GGG  +NL++  +G 
Sbjct: 121 VCVALLIATKLLTGGKWRLSEGLPRRAILRLYGAVVGLVSALMGIGGGAVSNLILTLHGV 180

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            I++A +T+AGV  LIA P  +  + +GWG   LPP +LGFV++   L+ +P SIL T  
Sbjct: 181 PIHRAVSTAAGVGVLIAIPGTIGYMIAGWGRPDLPPDALGFVSVATFLLTIPTSILTTRF 240

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              L++ + K++L   F   +      F
Sbjct: 241 GVALAHRLSKEWLARSFGCFLLLVCARF 268



 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 48/127 (37%), Gaps = 12/127 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +   + G +S L G+GGG V     +    L G+     +  A G  + +  P ++
Sbjct: 147 AILRLYGAVVGLVSALMGIGGGAVS----NLILTLHGVPIHRAVSTAAGVGVLIAIPGTI 202

Query: 84  MSFMEHRRH--------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
              +             G +++      I    +TT     +   + K +L ++F  F L
Sbjct: 203 GYMIAGWGRPDLPPDALGFVSVATFLLTIPTSILTTRFGVALAHRLSKEWLARSFGCFLL 262

Query: 136 LMGILML 142
           L+    L
Sbjct: 263 LVCARFL 269


>gi|319794038|ref|YP_004155678.1| hypothetical protein Varpa_3382 [Variovorax paradoxus EPS]
 gi|315596501|gb|ADU37567.1| protein of unknown function DUF81 [Variovorax paradoxus EPS]
          Length = 281

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 1/232 (0%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVP ++      G+   + + +A+ TS+  I  TSV S   H + G +   I+K     +
Sbjct: 43  MVPFITIIMGHRGVSSDLAVKMAIATSMATIIFTSVSSVRAHHKRGAVRWDIVKRLAPGI 102

Query: 108 PITTVVTSL-MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
            I ++  SL + + +  + L   FA+F       M    +    R+ P    +   G V 
Sbjct: 103 VIGSLAGSLGVFALLKGTALAIFFALFVGFSATQMFLDKKPKPTRQMPGTAGQLAGGGVI 162

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           GF+SG +G GGG  +   M +   SI+ A ATSA +   IA   +L    SG  + GLP 
Sbjct: 163 GFISGLVGAGGGFISVPFMTWCNISIHNAVATSAALGFPIAVANVLGYAISGQTVQGLPT 222

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            S G++ + A+++I   S+   PL  K ++ +  K L   F+ I++  +   
Sbjct: 223 GSFGYIWLPALVVIAVCSVFTAPLGAKAAHTLPVKKLKRVFASILYLLAAYM 274



 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +    + G +SGL G GGG + VP ++          +I +H A+ TS  +  P +V + 
Sbjct: 156 LAGGGVIGFISGLVGAGGGFISVPFMTWC--------NISIHNAVATSAALGFPIAVANV 207

Query: 87  MEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           + +               G I +  L         T  + +     +    L + FA   
Sbjct: 208 LGYAISGQTVQGLPTGSFGYIWLPALVVIAVCSVFTAPLGAKAAHTLPVKKLKRVFASIL 267

Query: 135 LLMGILMLKR 144
            L+   ML +
Sbjct: 268 YLLAAYMLWK 277


>gi|124267499|ref|YP_001021503.1| putative integral membrane protein [Methylibium petroleiphilum PM1]
 gi|124260274|gb|ABM95268.1| putative integral membrane protein [Methylibium petroleiphilum PM1]
          Length = 282

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 107/226 (47%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P ++    L G    + + VA+ TSL  I  TS+ S   H   G +   I++     + +
Sbjct: 47  PFITLLLTLKGFPSDLIVKVAIATSLATICFTSLSSVRAHHARGAVRWDIVRRLAPGIVL 106

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            +++ + +   +  + L   FA+F       ML+  +    R+ P     +  G V G +
Sbjct: 107 GSLLGAQVAKALPSALLAGLFALFVGFSATQMLRGGKPTPARQLPPAPGLFGVGGVIGAV 166

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G GG   +   M +    I+ A ATSA +   IA       I +GW L+GLPP +L
Sbjct: 167 SALVGAGGAFMSVPFMTWCNVPIHNAVATSAALGVPIALAGTAGYIAAGWNLHGLPPGTL 226

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           GF+ + A+L++   S++  PL  + ++ +  + L   F+++++  S
Sbjct: 227 GFLYLPALLVVSTASVMTAPLGARTAHALDVQQLRRVFALLLYAIS 272



 Score = 40.1 bits (93), Expect = 0.38,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 45/131 (34%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +     + G +S L G GG  + VP ++          ++ +H A+ TS  +  P ++  
Sbjct: 156 LFGVGGVIGAVSALVGAGGAFMSVPFMTWC--------NVPIHNAVATSAALGVPIALAG 207

Query: 86  FMEHRR------------HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
              +               G + +  L        +T  + +     +D   L + FA+ 
Sbjct: 208 TAGYIAAGWNLHGLPPGTLGFLYLPALLVVSTASVMTAPLGARTAHALDVQQLRRVFALL 267

Query: 134 CLLMGILMLKR 144
              +   M  R
Sbjct: 268 LYAISGYMFWR 278


>gi|258620341|ref|ZP_05715379.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258587220|gb|EEW11931.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 264

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 103/229 (44%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       G+   I M +A+ TSL  I  TS  S + H + G +++ ++K  +  + I
Sbjct: 33  PALLFLLPYAGVSAEITMQLALATSLATIILTSGSSALNHLKLGNVDLFVVKWLMPGVVI 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
                S +   +   +L K F +    + + M +  R+      P+ ++  I G   G +
Sbjct: 93  GGFFGSAVAEWIPSQYLPKVFGVIVFCLSVQMYRSIRMQQHHPMPNAFITTICGTGIGVV 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S   G+GGG  +   +  +G  + KA  +S+     IA   ++  I  G+ +  LP +S+
Sbjct: 153 SSLAGIGGGSLSVPFLNRHGIEMKKAVGSSSVCGFAIAISGMIGFILHGYQVENLPQYSI 212

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V + A+L I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 213 GYVYVPALLAIATTSMLTTRIGAKLATQMPTARLKKFFAIFLMCVAATM 261



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +     G +S L G+GGG + VP L++          I M  A+G+S       ++   +
Sbjct: 144 ICGTGIGVVSSLAGIGGGSLSVPFLNR--------HGIEMKKAVGSSSVCGFAIAISGMI 195

Query: 88  E------------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                            G + +  L        +TT + + + + +  + L K FAIF +
Sbjct: 196 GFILHGYQVENLPQYSIGYVYVPALLAIATTSMLTTRIGAKLATQMPTARLKKFFAIFLM 255

Query: 136 LMGILMLKR 144
            +   ML +
Sbjct: 256 CVAATMLFQ 264


>gi|330505461|ref|YP_004382330.1| hypothetical protein MDS_4547 [Pseudomonas mendocina NK-01]
 gi|328919747|gb|AEB60578.1| hypothetical protein MDS_4547 [Pseudomonas mendocina NK-01]
          Length = 260

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 79/256 (30%), Positives = 128/256 (50%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L +V    +G L+GLFGVGGGL++VPVL  +F   G+   I  H+A+GTSL  I  TS
Sbjct: 3   LLLYLVLGSAAGVLAGLFGVGGGLIIVPVLVLSFTSQGMATEILTHLAVGTSLATIVFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S +EH R G +   + +     + +   + +L  + +    L K    F +++   M 
Sbjct: 63  INSLIEHHRKGAVRWPLFRWLSLGILLGAALGALTAALIQGPMLQKIIGTFAIIVAAQMA 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +    R  P      + G V G+ S   G+GGG  T   +++    I +A ATSA  
Sbjct: 123 LDLKPKASRGVPGKPTLTVAGGVIGWASAIFGIGGGSLTVPFLVWRSVPIQQAVATSAAC 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA    L  +++GWG   LPPWS+GFV + A+L I   S+       +L++ +  + 
Sbjct: 183 GLPIAIAGALSFMFTGWGNAHLPPWSVGFVYLPALLGIAVTSMFFARFGARLAHRLSPQL 242

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F++++F+    F
Sbjct: 243 LKRLFALLLFSVGVSF 258


>gi|145298901|ref|YP_001141742.1| hypothetical protein ASA_1920 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851673|gb|ABO89994.1| conserved hypothetical membrane protein [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 264

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 75/253 (29%), Positives = 122/253 (48%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            ++    +G L+GLFG+GGGL++VPVL  +F+ MG +  I  H+A+GTSL  +  T   S
Sbjct: 8   YLLLGAFAGMLAGLFGIGGGLIIVPVLVVSFRAMGFEPDIITHLALGTSLPTMIFTGFSS 67

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H+  G ++  +++     + I   +  +  + +    LN     F   M + M    
Sbjct: 68  LRAHQEAGAVDWVMIRRLGVGMLIGAWLGGMTANQLSAGTLNVIIGCFAWAMALQMGLNL 127

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
           R   ER  P      I G + G++S   G+GGG  T   + +    +  A A SA  S  
Sbjct: 128 RPKAERHLPGPVGTGIAGTLIGWMSALFGIGGGSLTVPYLCWNSVPMRNAVAASAACSIP 187

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           IA    L  +Y+GWG   LP WS+GF+ + A+L I+  S     +  +L++ +  K L  
Sbjct: 188 IALAGSLSYLYAGWGHADLPEWSVGFIYLPALLGIVLTSTQFARVGARLAHRLSPKRLKQ 247

Query: 266 GFSMIMFTTSFVF 278
            F+++M      F
Sbjct: 248 AFALLMLLVGAKF 260



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 52/128 (40%), Gaps = 20/128 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +A  L G +S LFG+GGG + VP L          +S+ M  A+  S     P ++   +
Sbjct: 143 IAGTLIGWMSALFGIGGGSLTVPYLCW--------NSVPMRNAVAASAACSIPIALAGSL 194

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVT------------SLMISHVDKSFLNKAFAIFCL 135
            +   G  +  + +  +  + +  ++             + +   +    L +AFA+  L
Sbjct: 195 SYLYAGWGHADLPEWSVGFIYLPALLGIVLTSTQFARVGARLAHRLSPKRLKQAFALLML 254

Query: 136 LMGILMLK 143
           L+G   + 
Sbjct: 255 LVGAKFML 262


>gi|298368414|ref|ZP_06979732.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282417|gb|EFI23904.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
          Length = 268

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 60/260 (23%), Positives = 125/260 (48%), Gaps = 1/260 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVI 78
           ++ I  ++    L+G ++GL GVGGG ++VPV+  A QL GI +     H+A+GTS  V+
Sbjct: 4   LEIIAAMLAVGSLAGFIAGLLGVGGGTIIVPVVLWALQLQGIGNHPYAQHLAVGTSFAVM 63

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T++ S     +  +I+ + +      +    ++ +    ++  +     F  F  ++ 
Sbjct: 64  LFTTLSSVAAQHKKQSIDWQTVMRMTPGMTAGVLIGAASAKYMPTAGFQVFFIAFISIIA 123

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           +  L   +    R  P        G++ G +S  +G+GGG  +   +++     +KA  T
Sbjct: 124 VRTLVGIKPKPSRTLPRLAGLNATGVLFGAVSSWVGIGGGSLSVPFLIYCNMPPHKAVGT 183

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+G++  IA    +  + +G  ++ LP  ++GF+ + AV I+   +I+  PL  K ++ +
Sbjct: 184 SSGLAWPIALAGTVGYLAAGRHISNLPDGAVGFLYLPAVAILSIATIVFAPLGVKTAHKL 243

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
             + L   F +++   +   
Sbjct: 244 PPETLKTAFGLLLLAIAARM 263



 Score = 40.8 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 45/131 (34%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +     L G +S   G+GGG + VP L           ++  H A+GTS G+  P ++  
Sbjct: 144 LNATGVLFGAVSSWVGIGGGSLSVPFLIYC--------NMPPHKAVGTSSGLAWPIALAG 195

Query: 86  FMEHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +   G             + +  +        +   +       +    L  AF + 
Sbjct: 196 TVGYLAAGRHISNLPDGAVGFLYLPAVAILSIATIVFAPLGVKTAHKLPPETLKTAFGLL 255

Query: 134 CLLMGILMLKR 144
            L +   ML +
Sbjct: 256 LLAIAARMLWK 266


>gi|149926219|ref|ZP_01914481.1| hypothetical protein LMED105_01763 [Limnobacter sp. MED105]
 gi|149825037|gb|EDM84249.1| hypothetical protein LMED105_01763 [Limnobacter sp. MED105]
          Length = 289

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 67/257 (26%), Positives = 121/257 (47%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I  ++V   +SG L+GL G+GGG+++VP L+      G+     +H ++ TSL +I  T
Sbjct: 25  FIVSLLVLGVVSGVLAGLLGIGGGMLLVPFLTFLMVSQGVPVEHVVHSSIATSLAIIMFT 84

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H + G +   I+K     + I     S ++S++    L   F  F +     M
Sbjct: 85  SISSMRAHHKAGAVRWDIVKFLTPGILIGGFAGSKVVSYLPTKELALVFGAFVIFSAYQM 144

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
               +    R  P        G + G  S  +G GGG  +   M++   ++  A ATSA 
Sbjct: 145 YADKKPKPTRTLPGKTGLAAVGSLIGAASAIVGAGGGFLSVPFMVWSNINLRNAVATSAA 204

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           +   IA  + +  + +G  L G+P  SLG+V + AV  +  +S+L  P   +L++ +  K
Sbjct: 205 LGFPIAVFSSVAYVINGQHLQGMPTGSLGYVYLPAVGCVAAMSVLFAPYGARLAHTLPVK 264

Query: 262 YLTIGFSMIMFTTSFVF 278
            +   F++++   +   
Sbjct: 265 KIKRIFALLLSFIALSM 281



 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 46/131 (35%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +     L G  S + G GGG + VP +           +I +  A+ TS  +  P +V S
Sbjct: 162 LAAVGSLIGAASAIVGAGGGFLSVPFMVW--------SNINLRNAVATSAALGFPIAVFS 213

Query: 86  FMEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G + +  +     +  +     + +   +    + + FA+ 
Sbjct: 214 SVAYVINGQHLQGMPTGSLGYVYLPAVGCVAAMSVLFAPYGARLAHTLPVKKIKRIFALL 273

Query: 134 CLLMGILMLKR 144
              + + M+ +
Sbjct: 274 LSFIALSMIYK 284


>gi|262401628|ref|ZP_06078194.1| hypothetical protein VOA_003178 [Vibrio sp. RC586]
 gi|262352045|gb|EEZ01175.1| hypothetical protein VOA_003178 [Vibrio sp. RC586]
          Length = 264

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 103/229 (44%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       G+   I M +A+ TSL  I  TS  S + H + G +++ ++K  +  + +
Sbjct: 33  PALLFLLPYAGVSAEITMQLALATSLATIILTSGSSALNHLKLGNVDLFVVKWLMPGVVV 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
                S +   +   +L K F +  L + + M +  R+      P+  +  + G   G +
Sbjct: 93  GGFFGSAVAEWIPSQYLPKVFGVIVLCLSVQMFRSIRMQQHHPMPNALITTLCGTGIGVV 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S   G+GGG  +   +  +G  + KA  +S+     IA   ++  I  G+ +  LP +S+
Sbjct: 153 SSLAGIGGGSLSVPFLNRHGIEMKKAVGSSSVCGFAIAISGMIGFILHGYQVENLPQYSI 212

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V + A+L I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 213 GYVYVPALLAIATTSMLTTRIGAKLATQMPTARLKKFFAIFLMCVAATM 261



 Score = 49.3 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 20/127 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME- 88
               G +S L G+GGG + VP L++          I M  A+G+S       ++   +  
Sbjct: 146 GTGIGVVSSLAGIGGGSLSVPFLNR--------HGIEMKKAVGSSSVCGFAIAISGMIGF 197

Query: 89  -----------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G + +  L        +TT + + + + +  + L K FAIF + +
Sbjct: 198 ILHGYQVENLPQYSIGYVYVPALLAIATTSMLTTRIGAKLATQMPTARLKKFFAIFLMCV 257

Query: 138 GILMLKR 144
              ML +
Sbjct: 258 AATMLFQ 264


>gi|88803086|ref|ZP_01118612.1| hypothetical protein PI23P_10877 [Polaribacter irgensii 23-P]
 gi|88780652|gb|EAR11831.1| hypothetical protein PI23P_10877 [Polaribacter irgensii 23-P]
          Length = 281

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 76/267 (28%), Positives = 120/267 (44%), Gaps = 9/267 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           YI   + A  +SG L+GLFG+GGG+++VPVL   F+  G+ ++   HV +GTSL  I  T
Sbjct: 4   YILYYLAAGAISGVLAGLFGIGGGMIIVPVLIYIFKAQGVPEAALTHVGIGTSLTTIIVT 63

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H R G +N  + K     L I +++ + + S +  + L     I   L+G+ M
Sbjct: 64  SISSLRAHDRKGAVNWNVWKRMAPGLVIGSLMGAGVASVIQGNSLQAIIGIGAFLVGLKM 123

Query: 142 LKRDRLYCER----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           L       E     K P    +   G   G +S   G+GGG  T  ++ +YG  I  A  
Sbjct: 124 LFMKNKSLEENNLSKLPSPMGQTSLGGFIGIVSAIFGIGGGTLTVPILSYYGLKIQHAVG 183

Query: 198 TSAGVSALIAFPALLVRIYSGWGL-----NGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           TSA     IA          G  L     + LP    GFV++ A + +   S     +  
Sbjct: 184 TSAACGLPIAASGAFGFFVFGQFLDPSVKDALPNGVFGFVHMYAFICVSFASFFTARIGA 243

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           +L++ +    L   F++++       A
Sbjct: 244 RLAHKLPAAALKKAFAVLLLIVGIKLA 270



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 48/133 (36%), Gaps = 25/133 (18%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G +S +FG+GGG + VP+LS           + +  A+GTS     P +       
Sbjct: 149 GGFIGIVSAIFGIGGGTLTVPILSYY--------GLKIQHAVGTSAACGLPIAASGAFGF 200

Query: 90  RRHGTINMKILKDWIFVLPITTV-----------------VTSLMISHVDKSFLNKAFAI 132
              G      +KD +       V                 + + +   +  + L KAFA+
Sbjct: 201 FVFGQFLDPSVKDALPNGVFGFVHMYAFICVSFASFFTARIGARLAHKLPAAALKKAFAV 260

Query: 133 FCLLMGILMLKRD 145
             L++GI +    
Sbjct: 261 LLLIVGIKLALSS 273


>gi|257454094|ref|ZP_05619368.1| hypothetical protein ENHAE0001_0956 [Enhydrobacter aerosaccus SK60]
 gi|257448572|gb|EEV23541.1| hypothetical protein ENHAE0001_0956 [Enhydrobacter aerosaccus SK60]
          Length = 270

 Score =  214 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 2/259 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
                ++A   +GT +GLFGVGGGL++VPVL   F+  G    +  H+A+GTSL  I  T
Sbjct: 2   MYLWFLLAGAFAGTCAGLFGVGGGLIIVPVLMAIFKAYGYPSDVITHLAVGTSLATIVVT 61

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H + G +   + ++    L + + V + +   +    L    A   L MG+ M
Sbjct: 62  SISSMQSHNKRGGVRWDVWRNMSIGLVVGSFVGAYIADLLHGKVLAFLIAGMALFMGLKM 121

Query: 142 LKRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
           L   +         P   V+   G + G  S   G+GGG FT   +  +G ++ +A  TS
Sbjct: 122 LLAKKSEVVATTHLPSAPVQTGVGGLIGAASAIFGIGGGSFTVPFLSRFGLTMQQAVGTS 181

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A     IA    L  ++ G  + GLP  ++GFV+I A L I  +S L   +  KL++ + 
Sbjct: 182 AACGLPIAIAGALGFMFFGKDVQGLPAEAIGFVHITAFLCISVMSYLFAKVGAKLAHQLP 241

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              L   F  ++       
Sbjct: 242 ANTLKRMFGGLLLIVGAKM 260



 Score = 43.5 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 20/128 (15%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
              L G  S +FG+GGG   VP LS+          + M  A+GTS     P ++   + 
Sbjct: 144 VGGLIGAASAIFGIGGGSFTVPFLSRF--------GLTMQQAVGTSAACGLPIAIAGALG 195

Query: 89  HRRHGTINMKILKDWIFVLPITTVV------------TSLMISHVDKSFLNKAFAIFCLL 136
               G     +  + I  + IT  +             + +   +  + L + F    L+
Sbjct: 196 FMFFGKDVQGLPAEAIGFVHITAFLCISVMSYLFAKVGAKLAHQLPANTLKRMFGGLLLI 255

Query: 137 MGILMLKR 144
           +G  M+  
Sbjct: 256 VGAKMMLG 263


>gi|242278938|ref|YP_002991067.1| hypothetical protein Desal_1466 [Desulfovibrio salexigens DSM 2638]
 gi|242121832|gb|ACS79528.1| protein of unknown function DUF81 [Desulfovibrio salexigens DSM
           2638]
          Length = 265

 Score =  214 bits (546), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 112/232 (48%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VP+L      +GI +   MH+A+GTSL  I  TS+ S   H + G +   I K     
Sbjct: 29  VIVPILVFTLPPLGIPEVHLMHIALGTSLASIIFTSISSMRSHNKRGAVRWDIFKTITPG 88

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + + T + SL  S ++ +FL   F +F   +   ML   +    R+ P     ++ G V 
Sbjct: 89  IILGTFLGSLSTSFMNTNFLKGIFVVFLYYVASQMLFGLKPKASRQVPGFQGLFVAGNVI 148

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G  S  +G+GGG  +   +      I+ A  T+A +   IA       +++G G+ GLPP
Sbjct: 149 GIFSSLVGIGGGTLSVPFLTMCNIVIHTAIGTAAAIGLPIAIAGTAGYVWTGIGVEGLPP 208

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +  G+V + A++ I+  S+L  P+  +L++ +    L   F++++   +   
Sbjct: 209 YCFGYVYLPALIGIVSASMLTAPIGVRLAHSLPVDRLKKIFAILLIVVATRM 260



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + VA  + G  S L G+GGG + VP L+          +I +H A+GT+  +  P ++  
Sbjct: 141 LFVAGNVIGIFSSLVGIGGGTLSVPFLTMC--------NIVIHTAIGTAAAIGLPIAIAG 192

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
              +               G + +  L   +    +T  +   +   +    L K FAI 
Sbjct: 193 TAGYVWTGIGVEGLPPYCFGYVYLPALIGIVSASMLTAPIGVRLAHSLPVDRLKKIFAIL 252

Query: 134 CLLMGILMLKR 144
            +++   ML  
Sbjct: 253 LIVVATRMLIS 263


>gi|50084055|ref|YP_045565.1| hypothetical protein ACIAD0842 [Acinetobacter sp. ADP1]
 gi|49530031|emb|CAG67743.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter sp. ADP1]
          Length = 267

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 123/258 (47%), Gaps = 2/258 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +    ++G  +GLFGVGGGL+++P+L   F  +  D ++ MH+A+GTSL  I  TS
Sbjct: 3   LIIYLAIGAIAGFAAGLFGVGGGLIIIPILYVVFTQLHYDPAVIMHMAVGTSLATIIVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S M H + G +   + K+    L + +++ + +   +   +L      F + +   M 
Sbjct: 63  MSSVMAHHKRGAVLWSVFKNMAPGLVLGSLLGAGIADLLSGQYLQLIIGTFAIWVAFKMF 122

Query: 143 --KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
                ++   ++ P   ++ + G   G  S   G+GGG  T   +   G  + KA ATSA
Sbjct: 123 TGANVKVDQSKQLPSRAMQVLAGGGIGIASAIFGIGGGSLTVPYLNKNGVVMQKAVATSA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    L  ++ G+  +   P ++G+++I A + I  +S +   +  K+++ +  
Sbjct: 183 ACGLPIAVAGALGFMWFGYHQHVSVPNAIGYIHIYAFIGISLMSFVTAKVGAKVAHQLSP 242

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   FS ++      F
Sbjct: 243 AMLKKCFSGLLTVVGIYF 260



 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A    G  S +FG+GGG + VP L+         + + M  A+ TS     P +V   
Sbjct: 142 VLAGGGIGIASAIFGIGGGSLTVPYLN--------KNGVVMQKAVATSAACGLPIAVAGA 193

Query: 87  -----MEHRRH-------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
                  + +H       G I++        +  +T  V + +   +  + L K F+   
Sbjct: 194 LGFMWFGYHQHVSVPNAIGYIHIYAFIGISLMSFVTAKVGAKVAHQLSPAMLKKCFSGLL 253

Query: 135 LLMGILMLKR 144
            ++GI  + +
Sbjct: 254 TVVGIYFIYQ 263


>gi|222054260|ref|YP_002536622.1| protein of unknown function DUF81 [Geobacter sp. FRC-32]
 gi|221563549|gb|ACM19521.1| protein of unknown function DUF81 [Geobacter sp. FRC-32]
          Length = 264

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 1/260 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +V    L +V    +G ++GL GVGGGLV+VPVLS  F    +     +H+A+GTSL  I
Sbjct: 1   MVTVWLLYLVLGAFAGVMAGLLGVGGGLVIVPVLSFIFAHQQLPPEHILHLALGTSLASI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS+ S   H   G +N  +++     +   T + S + S +  +FL   F +F   + 
Sbjct: 61  IFTSISSLRAHHARGAVNWNVVRQISPGIVFGTFLGSWVASRLSTAFLKGFFVVFLFYVA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           I M    +    R+ P     +  G + G +S  +G+GGG  +   +L+   +++ A  T
Sbjct: 121 IQMFFNIKPQPHRQLPGKGTIFGVGGLIGGVSSFVGIGGGSMSVPFLLWCNVAMHNAIGT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           SA +   IA       + +G     LPP +LGFV++ A++ +   SI   PL  KL++++
Sbjct: 181 SAAIGFPIALAGAAGYVANGL-AASLPPHTLGFVHLPALMGVAAASIATAPLGAKLAHLL 239

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++++       
Sbjct: 240 PVAGLKKIFALLLVVIGTKM 259



 Score = 49.3 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 19/130 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I     L G +S   G+GGG + VP L           ++ MH A+GTS  +  P ++  
Sbjct: 141 IFGVGGLIGGVSSFVGIGGGSMSVPFLLWC--------NVAMHNAIGTSAAIGFPIALAG 192

Query: 86  FMEH-----------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
              +              G +++  L         T  + + +   +  + L K FA+  
Sbjct: 193 AAGYVANGLAASLPPHTLGFVHLPALMGVAAASIATAPLGAKLAHLLPVAGLKKIFALLL 252

Query: 135 LLMGILMLKR 144
           +++G  M+  
Sbjct: 253 VVIGTKMVLD 262


>gi|167854629|ref|ZP_02477410.1| hypothetical protein HPS_02594 [Haemophilus parasuis 29755]
 gi|167854384|gb|EDS25617.1| hypothetical protein HPS_02594 [Haemophilus parasuis 29755]
          Length = 264

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 122/258 (47%), Gaps = 1/258 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +V+     ++   ++G L+GLFG+GGG+++VP L      +G+ D + M +A+GTS   I
Sbjct: 1   MVEMFVCCLILGSVAGFLAGLFGIGGGMIIVPTLVYLLPQIGVPDDLLMSIALGTSFSTI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  +   H + G +   ++K ++  L +   ++ L++S + KS + K FA+  L + 
Sbjct: 61  VLTTFSAAQRHHKLGNVQWSVVKFFVPALMVAVFISGLIVSDLPKSVMTKIFAVMILYLS 120

Query: 139 ILMLKRDRLYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           + M    +       P       I G V G LS   G+ GG F    +   G  + KA  
Sbjct: 121 LKMFLSLKPKQAEPKPLTTQSTLIAGGVIGVLSSFAGIAGGAFIVPFLNSRGIELKKAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS+    L+     +  + SGW    LP +++G+V + A++ I   SI  + L    +  
Sbjct: 181 TSSFCGGLLGLAGAISFVISGWDNPNLPQYAVGYVYLPALVGITLTSIFTSKLGATAANK 240

Query: 258 IGKKYLTIGFSMIMFTTS 275
           +    L   F++ +   +
Sbjct: 241 LPVPILKRAFAVFLMCVA 258



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 47/130 (36%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A  + G LS   G+ GG  +VP L+           I +  A+GTS        +   
Sbjct: 143 LIAGGVIGVLSSFAGIAGGAFIVPFLN--------SRGIELKKAIGTSSFCGGLLGLAGA 194

Query: 87  ME------------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G + +  L         T+ + +   + +    L +AFA+F 
Sbjct: 195 ISFVISGWDNPNLPQYAVGYVYLPALVGITLTSIFTSKLGATAANKLPVPILKRAFAVFL 254

Query: 135 LLMGILMLKR 144
           + + + M  +
Sbjct: 255 MCVAVNMFLK 264


>gi|28897296|ref|NP_796901.1| hypothetical protein VP0522 [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363901|ref|ZP_05776649.1| conserved domain protein [Vibrio parahaemolyticus K5030]
 gi|260876261|ref|ZP_05888616.1| conserved domain protein [Vibrio parahaemolyticus AN-5034]
 gi|260897578|ref|ZP_05906074.1| conserved domain protein [Vibrio parahaemolyticus Peru-466]
 gi|260901101|ref|ZP_05909496.1| conserved domain protein [Vibrio parahaemolyticus AQ4037]
 gi|28805505|dbj|BAC58785.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308084913|gb|EFO34608.1| conserved domain protein [Vibrio parahaemolyticus Peru-466]
 gi|308092960|gb|EFO42655.1| conserved domain protein [Vibrio parahaemolyticus AN-5034]
 gi|308107461|gb|EFO45001.1| conserved domain protein [Vibrio parahaemolyticus AQ4037]
 gi|308112973|gb|EFO50513.1| conserved domain protein [Vibrio parahaemolyticus K5030]
          Length = 263

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 112/231 (48%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP L       GI   + MH+A+ TSL  I  TS  S + H + G ++M ++K  +  +
Sbjct: 31  VVPALLFLLPWAGISPEMSMHMALATSLASIIVTSGSSALNHLKLGNVDMFVVKWLMPGV 90

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            I   V + +   +   +L K F +  L + + M +  ++  E+  P + V  ++G   G
Sbjct: 91  VIGGFVGANIAEWIPTHYLPKVFGVIVLCLAVQMFRSIKVKSEKPMPSSPVTMMYGTGIG 150

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S   G+GGG  +   +  +G  + KA  +S+    +IA   ++  I  G+ + GLP +
Sbjct: 151 VVSSLAGIGGGSLSVPFLNKHGVEMRKAVGSSSVCGCIIAISGMIGFILHGYKVEGLPAY 210

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           S+G+V + A+L I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 211 SIGYVYLPALLAIAMTSMLTTKVGAKLATNLPTAVLKKIFAIFLMFVAATM 261



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 20/126 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G +S L G+GGG + VP L+           + M  A+G+S       ++   +  
Sbjct: 146 GTGIGVVSSLAGIGGGSLSVPFLN--------KHGVEMRKAVGSSSVCGCIIAISGMIGF 197

Query: 90  RRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
             HG             + +  L        +TT V + + +++  + L K FAIF + +
Sbjct: 198 ILHGYKVEGLPAYSIGYVYLPALLAIAMTSMLTTKVGAKLATNLPTAVLKKIFAIFLMFV 257

Query: 138 GILMLK 143
              ML 
Sbjct: 258 AATMLL 263


>gi|261823644|ref|YP_003261750.1| hypothetical protein Pecwa_4451 [Pectobacterium wasabiae WPP163]
 gi|261607657|gb|ACX90143.1| protein of unknown function DUF81 [Pectobacterium wasabiae WPP163]
          Length = 268

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 66/243 (27%), Positives = 123/243 (50%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V+++   +    + G ++GL G+GGG +MVPVL+  F   G+D++  +H+A+GTS+  I 
Sbjct: 3   VEWVAAYLALGAVVGFMAGLLGIGGGGIMVPVLTALFAAQGVDNTHLVHLALGTSMAAIV 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T++ S   H +H  +   ++      + I T   + + + +    L   F+ F   + +
Sbjct: 63  VTAISSLRTHHQHQAVLWPVVMKITPAILIGTFTATWLATLLPTRTLAIFFSCFMAYVAL 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M+   +   +R+ P      + G+V G +S  + +GGG  T   + +    I +A  TS
Sbjct: 123 QMVLNIKPKPQRQLPGTAGVSLAGLVIGSISALVAIGGGSLTVPFLTWCNIRIQQAIGTS 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A V   IA    L  + +GW  NGLP +S+G+V++ AV +I  +S    P+  +L++ + 
Sbjct: 183 AAVGLPIALSGALGYMINGWSANGLPDYSVGYVSLPAVFLISAVSFFTAPVGARLAHRLP 242

Query: 260 KKY 262
              
Sbjct: 243 VAT 245


>gi|73540356|ref|YP_294876.1| hypothetical protein Reut_A0650 [Ralstonia eutropha JMP134]
 gi|72117769|gb|AAZ60032.1| Protein of unknown function DUF81 [Ralstonia eutropha JMP134]
          Length = 270

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+  F  +G      +H+A+ TS+G I  TS+ S   H + G +   I+      + +
Sbjct: 33  PFLTLLFTSLGFSGEAIVHMAIATSMGTILFTSLSSVRAHHKRGAVRWPIVLALAPGILL 92

Query: 110 TTVVTSL-MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
             ++    + + +  S+L+ AFA F     + ML+  +    R+ P        G   GF
Sbjct: 93  GGMIGGGKVFAALKTSWLSLAFACFVGFSALQMLRSRKPAPSRQLPGVPGMVGAGSAIGF 152

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G GG   +   M +    I+ A ATSA +   IA  +++  I+SGW   GLP  S
Sbjct: 153 LSSLVGAGGAFVSVPFMTWCNVPIHNAVATSAALGFPIAVASVVGYIWSGWQQPGLPDGS 212

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           LG++ + A+L I   S+L  PL  + ++ +    L   F++++   +   
Sbjct: 213 LGYIYLPALLAIAVTSVLTAPLGARTAHRMDVGQLRKAFAVLLLCLATYM 262



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++ A    G LS L G GG  V VP ++          ++ +H A+ TS  +  P +V S
Sbjct: 143 MVGAGSAIGFLSSLVGAGGAFVSVPFMTWC--------NVPIHNAVATSAALGFPIAVAS 194

Query: 86  FMEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G I +  L        +T  + +     +D   L KAFA+ 
Sbjct: 195 VVGYIWSGWQQPGLPDGSLGYIYLPALLAIAVTSVLTAPLGARTAHRMDVGQLRKAFAVL 254

Query: 134 CLLMGILMLKR 144
            L +   ML +
Sbjct: 255 LLCLATYMLWK 265


>gi|219872260|ref|YP_002476635.1| permease [Haemophilus parasuis SH0165]
 gi|219692464|gb|ACL33687.1| permease [Haemophilus parasuis SH0165]
          Length = 265

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 1/259 (0%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +V+     ++   ++G L+GLFG+GGG+++VP L      +G+ D + M +A+GTS   
Sbjct: 1   MMVEMFVCCLILGSVAGFLAGLFGIGGGMIIVPTLVYLLPQIGVPDDLLMSIALGTSFST 60

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I  T+  +   H + G +   ++K ++  L +   ++ L++S + KS + K FA+  L +
Sbjct: 61  IVLTTFSAAQRHHKLGNVQWSVVKFFVPALMVAVFISGLIVSDLPKSVMTKIFAVMILYL 120

Query: 138 GILMLKRDRLYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
            + M    +       P       I G V G LS   G+ GG F    +   G  + KA 
Sbjct: 121 SLKMFLSLKPKQAEPKPLTTQSTLIAGGVIGVLSSFAGIAGGAFIVPFLNSRGIELKKAI 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            TS+    L+     +  + SGW    LP +++G+V + A++ I   SI  + L    + 
Sbjct: 181 GTSSFCGGLLGLAGAISFVISGWDNPNLPQYAVGYVYLPALVGITLTSIFTSKLGATAAN 240

Query: 257 MIGKKYLTIGFSMIMFTTS 275
            +    L   F++ +   +
Sbjct: 241 KLPVPILKRAFAVFLMCVA 259



 Score = 45.8 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 47/130 (36%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A  + G LS   G+ GG  +VP L+           I +  A+GTS        +   
Sbjct: 144 LIAGGVIGVLSSFAGIAGGAFIVPFLN--------SRGIELKKAIGTSSFCGGLLGLAGA 195

Query: 87  ME------------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G + +  L         T+ + +   + +    L +AFA+F 
Sbjct: 196 ISFVISGWDNPNLPQYAVGYVYLPALVGITLTSIFTSKLGATAANKLPVPILKRAFAVFL 255

Query: 135 LLMGILMLKR 144
           + + + M  +
Sbjct: 256 MCVAVNMFLK 265


>gi|320157359|ref|YP_004189738.1| hypothetical protein VVM_04095 [Vibrio vulnificus MO6-24/O]
 gi|319932671|gb|ADV87535.1| protein of unknown function DUF81 [Vibrio vulnificus MO6-24/O]
          Length = 263

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 128/258 (49%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + +++V     G ++GL G+GGGL++VP L       GI   + MH+A+ TSL  I  
Sbjct: 4   ELLSVLLVLGAFVGVMAGLLGIGGGLIVVPALLYLLPWAGIPTELSMHMALATSLASIIV 63

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS  S + H + G +++ ++K  +  + I   V + +   +   +L + F +  L++ + 
Sbjct: 64  TSGSSALNHLKLGNVDIFVVKWLMPGVVIGGFVGANIAEWIPTQYLPRVFGVIVLVLALQ 123

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           M +  R+   R  P + V  ++G   G +S   G+GGG  +   +  +G  + KA  +S+
Sbjct: 124 MFRSIRVTTTRAMPSSPVTMLYGTGIGVVSSLAGIGGGSLSVPFLNRHGVEMRKAVGSSS 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
               +IA   +   I  G+ ++ LP +S+G+V + A+L I   S+L T +  + +  +  
Sbjct: 184 VCGCVIAIAGMTGFILHGYSVDSLPDYSVGYVYLPALLAIAGTSMLTTRIGARWATTLPT 243

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F++ +   +   
Sbjct: 244 AKLKKIFALFLMFVALSM 261



 Score = 43.1 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 20/125 (16%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL---GVIAPTSVMSF 86
               G +S L G+GGG + VP L++          + M  A+G+S     VIA   +  F
Sbjct: 146 GTGIGVVSSLAGIGGGSLSVPFLNR--------HGVEMRKAVGSSSVCGCVIAIAGMTGF 197

Query: 87  MEH---------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           + H            G + +  L        +TT + +   + +  + L K FA+F + +
Sbjct: 198 ILHGYSVDSLPDYSVGYVYLPALLAIAGTSMLTTRIGARWATTLPTAKLKKIFALFLMFV 257

Query: 138 GILML 142
            + ML
Sbjct: 258 ALSML 262


>gi|291615140|ref|YP_003525297.1| hypothetical protein Slit_2685 [Sideroxydans lithotrophicus ES-1]
 gi|291585252|gb|ADE12910.1| protein of unknown function DUF81 [Sideroxydans lithotrophicus
           ES-1]
          Length = 265

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 124/256 (48%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +++    + +  ++G L+GLFGVGGGLV+VPVL   F          MH+A+GT++  I 
Sbjct: 1   MEWYAAYLASGVVAGFLAGLFGVGGGLVLVPVLLLMFDAQHFSAEHSMHLALGTAMATIV 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ S  +H +H  +N ++++     + + T + +L  SH+    L   F +F      
Sbjct: 61  FTSISSMRKHHQHDAVNWQVVRRITPGILLGTALGALSASHIPARELGIFFTLFVYFAAA 120

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            +L   R +  R+ P        G +TG+LS  + +GGG      +++    I  A  T+
Sbjct: 121 QILVDKRPHASRQLPGAAGMTFTGTLTGWLSSMVSIGGGTIVVPFLIWCNVPIRNAIGTA 180

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           + +   IA    L  I  G  ++ LP   LG+V + A+  I   S+L  P   K ++ + 
Sbjct: 181 SAIGFPIAVGGTLGYIAVGSHIDALPEPHLGYVYLPALFWIASASVLTAPFGAKAAHRMK 240

Query: 260 KKYLTIGFSMIMFTTS 275
            + L   F++++   +
Sbjct: 241 VELLRKLFAVLLIVLA 256



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 4/123 (3%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +     L+G LS +  +GGG ++VP L          +G   +I   +A+G +LG IA  
Sbjct: 140 MTFTGTLTGWLSSMVSIGGGTIVVPFLIWCNVPIRNAIGTASAIGFPIAVGGTLGYIAVG 199

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S +  +     G + +  L        +T    +     +    L K FA+  +++   +
Sbjct: 200 SHIDALPEPHLGYVYLPALFWIASASVLTAPFGAKAAHRMKVELLRKLFAVLLIVLATKL 259

Query: 142 LKR 144
           L +
Sbjct: 260 LWK 262


>gi|261377741|ref|ZP_05982314.1| putative membrane protein [Neisseria cinerea ATCC 14685]
 gi|269146024|gb|EEZ72442.1| putative membrane protein [Neisseria cinerea ATCC 14685]
          Length = 268

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 115/256 (44%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           + I L++     +G ++GLFGVGGG ++VPV+       G+       H+A+GTS  V+ 
Sbjct: 5   EIILLLLSVGSAAGFIAGLFGVGGGTLIVPVVLWVLGYQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +     + SL   ++   +L   F +F   +  
Sbjct: 65  FTTFSSMLGQHKKQAVDWKTVFIMMPGMIFGVFLGSLSAKYIPTFWLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L           P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 RTLHTGHQTASHPLPKLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIRCGFPTHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + A+ ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALAGAVSYLLNGLKVEGLPEGSLGFLYLPAIGVLSVATITFAPLGVKAAHKLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SGKLKKSFGIMLLLIA 260



 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G   GF++G  GVGGG     ++L+         +  + + A  TS  V     
Sbjct: 8   LLLLSVGSAAGFIAGLFGVGGGTLIVPVVLWVLGYQGLAQHPYAQHLAVGTSFAVMVFTT 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L     G        W   F+ +  ++  + +  L           I   +L I F
Sbjct: 68  FSSML-----GQHKKQAVDWKTVFIMMPGMIFGVFLGSLSAKY-------IPTFWLQIFF 115

Query: 268 SMIMFTTSFV 277
            + +   +F 
Sbjct: 116 ILFLTAVAFR 125



 Score = 37.4 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L GT+S   G+GGG + VP L +             H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGTMSSWVGIGGGSLSVPFLIRC--------GFPTHKAIGTSSGLAWPIALAG 195

Query: 86  FMEHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +  +G             + +  +            +       +    L K+F I 
Sbjct: 196 AVSYLLNGLKVEGLPEGSLGFLYLPAIGVLSVATITFAPLGVKAAHKLSSGKLKKSFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|271498621|ref|YP_003331646.1| hypothetical protein Dd586_0043 [Dickeya dadantii Ech586]
 gi|270342176|gb|ACZ74941.1| protein of unknown function DUF81 [Dickeya dadantii Ech586]
          Length = 268

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 63/249 (25%), Positives = 121/249 (48%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++++   +    + G ++GL G+GGG +MVPVL+  F   G++ +  +H+A+GTS+  I 
Sbjct: 3   IEWMLAYLALGAVVGFMAGLLGIGGGGIMVPVLTALFAAQGVEKTHLVHLALGTSMAAIV 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T++ S   H +H  +   ++      + + T   + + + +    L   F+ F   + +
Sbjct: 63  ITAISSLRTHHQHQAVMWPVVWRITPAILLGTFAATWLAALLPTRALAIFFSCFMAYVSL 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M+   +    R+ P      + G+  G +S  + +GGG  T   + +    I +A  TS
Sbjct: 123 QMVLNIKPKPHRQLPGVTGMSLAGLTIGGISALVAIGGGSLTVPFLTWCNVRIQQAIGTS 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A V   IA    L  + +GW   GLP  S+G+V++ AV +I  +S    P+  +L++ + 
Sbjct: 183 AAVGLPIALSGALGYMINGWSATGLPALSVGYVSLPAVALISAVSFFTAPVGARLAHRLP 242

Query: 260 KKYLTIGFS 268
              L   F+
Sbjct: 243 VATLKKAFA 251


>gi|323497787|ref|ZP_08102801.1| hypothetical protein VISI1226_17956 [Vibrio sinaloensis DSM 21326]
 gi|323317134|gb|EGA70131.1| hypothetical protein VISI1226_17956 [Vibrio sinaloensis DSM 21326]
          Length = 263

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 129/256 (50%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++++ L+++   + G ++GL G+GGGL++VP L     + GI+ SI M +A+ TSL  I 
Sbjct: 3   IEFLLLLLLLGSVVGIMAGLLGIGGGLIVVPALMFLLPMAGIEPSIAMQIALATSLASII 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  S   H + G ++M ++K  +  + I   + + +   +   +L K F +  L + +
Sbjct: 63  VTSGSSAYNHFKLGNVDMFVVKWLMPGVVIGGFLGANVAEWIPSQYLPKVFGVIVLCLAV 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            ML   R   +R+ P +      G   G +S   G+GGG  +   +  +G  + KA  +S
Sbjct: 123 QMLFSIRGKSQRQMPGSGATMSIGTGIGMISSLAGIGGGSLSVPFLNRHGIEMRKAVGSS 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +     IA   +L  I+ G+    LP +SLG+V + A++ I   S+L T +  +L+  + 
Sbjct: 183 SVCGCFIALSGMLGFIFHGYKAEALPAYSLGYVYLPALIGITSTSMLTTRIGARLASTMP 242

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F++ +   +
Sbjct: 243 TATLKKIFALFLMFVA 258



 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 20/126 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G +S L G+GGG + VP L++          I M  A+G+S       ++   +  
Sbjct: 146 GTGIGMISSLAGIGGGSLSVPFLNR--------HGIEMRKAVGSSSVCGCFIALSGMLGF 197

Query: 90  ------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G + +  L        +TT + + + S +  + L K FA+F + +
Sbjct: 198 IFHGYKAEALPAYSLGYVYLPALIGITSTSMLTTRIGARLASTMPTATLKKIFALFLMFV 257

Query: 138 GILMLK 143
              ML 
Sbjct: 258 AGTMLL 263


>gi|328472060|gb|EGF42937.1| hypothetical protein VP10329_02865 [Vibrio parahaemolyticus 10329]
          Length = 263

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 113/232 (48%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++VP L       GI   + MH+A+ TSL  I  TS  S + H + G ++M ++K  +  
Sbjct: 30  IVVPALLFLLPWAGISPEMSMHMALATSLASIIVTSGSSALNHLKLGNVDMFVVKWLMPG 89

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + I   V + +   +   +L K F +  L + + M +  ++  E+  P + V  ++G   
Sbjct: 90  VVIGGFVGANIAEWIPTHYLPKVFGVIVLCLAVQMFRSIKVKSEKPMPSSPVTMMYGTGI 149

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S   G+GGG  +   +  +G  + KA  +S+    +IA   ++  I  G+ + GLP 
Sbjct: 150 GVVSSLAGIGGGSLSVPFLNKHGVEMRKAVGSSSVCGCIIAISGMVGFILHGYKVEGLPA 209

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +S+G+V + A+L I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 210 YSVGYVYLPALLAIAMTSMLTTKVGAKLATNLPTAVLKKIFAIFLMFVAATM 261



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 20/126 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G +S L G+GGG + VP L+           + M  A+G+S       ++   +  
Sbjct: 146 GTGIGVVSSLAGIGGGSLSVPFLN--------KHGVEMRKAVGSSSVCGCIIAISGMVGF 197

Query: 90  RRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
             HG             + +  L        +TT V + + +++  + L K FAIF + +
Sbjct: 198 ILHGYKVEGLPAYSVGYVYLPALLAIAMTSMLTTKVGAKLATNLPTAVLKKIFAIFLMFV 257

Query: 138 GILMLK 143
              ML 
Sbjct: 258 AATMLL 263


>gi|261250326|ref|ZP_05942902.1| hypothetical protein VIA_000346 [Vibrio orientalis CIP 102891]
 gi|260939442|gb|EEX95428.1| hypothetical protein VIA_000346 [Vibrio orientalis CIP 102891]
          Length = 263

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 127/258 (49%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +++ +   ++   + G ++GL G+GGGL++VP L     + G+D  I MH+A+ TSL  
Sbjct: 1   MLIELLLAFMLLGAIVGVMAGLLGIGGGLIVVPALLFLLPMAGVDPDISMHIALATSLAT 60

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I  TS  S + H + G ++M ++K  +  + +   + + +   +   +L K F +    +
Sbjct: 61  IIATSGSSALNHFKLGNVDMFVVKWLMPGVVVGGFLGAKVAEWIPSQYLPKVFGVIVFCL 120

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            + ML   +    +  P N V    G   G +S   G+GGG  +   +  +G  + KA  
Sbjct: 121 AVQMLFSLKGKAAKTMPSNAVTMGIGTGIGMISSLAGIGGGSLSVPFLNRHGIDMRKAVG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +S+    +IA   +L  I  G+ +  LP +S+G+V + A++ I   S+L+T    KL+  
Sbjct: 181 SSSVCGCMIAISGMLGFIMHGYKVESLPEYSIGYVYLPALIAIASTSMLMTRTGAKLATS 240

Query: 258 IGKKYLTIGFSMIMFTTS 275
           +    L   F++ +   +
Sbjct: 241 LPTPTLKKIFALFLMCVA 258



 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 20/126 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G +S L G+GGG + VP L++          I M  A+G+S       ++   +  
Sbjct: 146 GTGIGMISSLAGIGGGSLSVPFLNR--------HGIDMRKAVGSSSVCGCMIAISGMLGF 197

Query: 90  ------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G + +  L        + T   + + + +    L K FA+F + +
Sbjct: 198 IMHGYKVESLPEYSIGYVYLPALIAIASTSMLMTRTGAKLATSLPTPTLKKIFALFLMCV 257

Query: 138 GILMLK 143
              ML 
Sbjct: 258 AGTMLL 263


>gi|15640692|ref|NP_230322.1| hypothetical protein VC0673 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121591331|ref|ZP_01678620.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121730083|ref|ZP_01682488.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147675364|ref|YP_001216168.1| hypothetical protein VC0395_A0205 [Vibrio cholerae O395]
 gi|153216948|ref|ZP_01950712.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|153803569|ref|ZP_01958155.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|153823740|ref|ZP_01976407.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|153826504|ref|ZP_01979171.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|153829179|ref|ZP_01981846.1| putative membrane protein [Vibrio cholerae 623-39]
 gi|227080854|ref|YP_002809405.1| hypothetical protein VCM66_0631 [Vibrio cholerae M66-2]
 gi|229505707|ref|ZP_04395217.1| hypothetical protein VCF_000918 [Vibrio cholerae BX 330286]
 gi|229508719|ref|ZP_04398212.1| hypothetical protein VCE_000124 [Vibrio cholerae B33]
 gi|229512933|ref|ZP_04402400.1| hypothetical protein VCB_000577 [Vibrio cholerae TMA 21]
 gi|229519531|ref|ZP_04408974.1| hypothetical protein VCC_003561 [Vibrio cholerae RC9]
 gi|229520963|ref|ZP_04410385.1| hypothetical protein VIF_001487 [Vibrio cholerae TM 11079-80]
 gi|229525324|ref|ZP_04414729.1| hypothetical protein VCA_002946 [Vibrio cholerae bv. albensis
           VL426]
 gi|229530478|ref|ZP_04419866.1| hypothetical protein VCG_003598 [Vibrio cholerae 12129(1)]
 gi|229608726|ref|YP_002879374.1| hypothetical protein VCD_003648 [Vibrio cholerae MJ-1236]
 gi|254226523|ref|ZP_04920106.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|254291913|ref|ZP_04962695.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|254851005|ref|ZP_05240355.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255743868|ref|ZP_05417824.1| hypothetical protein VCH_000163 [Vibrio cholera CIRS 101]
 gi|262156087|ref|ZP_06029206.1| hypothetical protein VIG_001308 [Vibrio cholerae INDRE 91/1]
 gi|262169972|ref|ZP_06037662.1| hypothetical protein VIJ_003235 [Vibrio cholerae RC27]
 gi|297580797|ref|ZP_06942723.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|298500787|ref|ZP_07010590.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9655111|gb|AAF93838.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121546812|gb|EAX56977.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121628170|gb|EAX60697.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|124114013|gb|EAY32833.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124120893|gb|EAY39636.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|125620927|gb|EAZ49278.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|126518734|gb|EAZ75957.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146317247|gb|ABQ21786.1| putative membrane protein [Vibrio cholerae O395]
 gi|148875368|gb|EDL73503.1| putative membrane protein [Vibrio cholerae 623-39]
 gi|149739684|gb|EDM53891.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|150422199|gb|EDN14164.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|227008742|gb|ACP04954.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227012498|gb|ACP08708.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|229332251|gb|EEN97739.1| hypothetical protein VCG_003598 [Vibrio cholerae 12129(1)]
 gi|229338905|gb|EEO03922.1| hypothetical protein VCA_002946 [Vibrio cholerae bv. albensis
           VL426]
 gi|229342196|gb|EEO07192.1| hypothetical protein VIF_001487 [Vibrio cholerae TM 11079-80]
 gi|229344220|gb|EEO09195.1| hypothetical protein VCC_003561 [Vibrio cholerae RC9]
 gi|229350182|gb|EEO15135.1| hypothetical protein VCB_000577 [Vibrio cholerae TMA 21]
 gi|229354243|gb|EEO19173.1| hypothetical protein VCE_000124 [Vibrio cholerae B33]
 gi|229357930|gb|EEO22847.1| hypothetical protein VCF_000918 [Vibrio cholerae BX 330286]
 gi|229371381|gb|ACQ61804.1| hypothetical protein VCD_003648 [Vibrio cholerae MJ-1236]
 gi|254846710|gb|EET25124.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255738499|gb|EET93888.1| hypothetical protein VCH_000163 [Vibrio cholera CIRS 101]
 gi|262021706|gb|EEY40417.1| hypothetical protein VIJ_003235 [Vibrio cholerae RC27]
 gi|262030123|gb|EEY48768.1| hypothetical protein VIG_001308 [Vibrio cholerae INDRE 91/1]
 gi|297535213|gb|EFH74048.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297540568|gb|EFH76626.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|327483473|gb|AEA77880.1| Protein of unknown function DUF81 [Vibrio cholerae LMA3894-4]
          Length = 264

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 104/229 (45%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       GI   I M +A+ TSL  I  TS  S + H + G +++ ++K  +  + +
Sbjct: 33  PALLFLLPYAGISTEIVMQLALATSLATIILTSGSSALNHLKLGNVDVFVVKWLMPGVVV 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
              + S++   +   +L K F +  L + + M +  R       P  ++  + G   G +
Sbjct: 93  GGFLGSVVAEWIPSQYLPKVFGVIVLCLSVQMYRSIRALQNHPMPSAWITTLCGTGIGVI 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S   G+GGG  +   +  +G  + KA  +S+     IA   ++  I  G+ +  LP +SL
Sbjct: 153 SSLAGIGGGSLSVPFLNRHGIEMKKAIGSSSVCGFAIAISGMIGFILHGYQVENLPQYSL 212

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V + A+L I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 213 GYVYLPALLAIATTSMLTTRIGAKLATQMPTARLKRFFAIFLMCVAVTM 261



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 20/133 (15%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  +     G +S L G+GGG + VP L++          I M  A+G+S       ++
Sbjct: 140 WITTLCGTGIGVISSLAGIGGGSLSVPFLNR--------HGIEMKKAIGSSSVCGFAIAI 191

Query: 84  MSFME------------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
              +                 G + +  L        +TT + + + + +  + L + FA
Sbjct: 192 SGMIGFILHGYQVENLPQYSLGYVYLPALLAIATTSMLTTRIGAKLATQMPTARLKRFFA 251

Query: 132 IFCLLMGILMLKR 144
           IF + + + ML +
Sbjct: 252 IFLMCVAVTMLFQ 264


>gi|261212217|ref|ZP_05926503.1| hypothetical protein VCJ_002491 [Vibrio sp. RC341]
 gi|260838825|gb|EEX65476.1| hypothetical protein VCJ_002491 [Vibrio sp. RC341]
          Length = 264

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 104/229 (45%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       GI   I M +A+ TSL  I  TS  S + H + G +++ ++K  +  + +
Sbjct: 33  PALLFLLPYAGISSDIVMQLALATSLATIILTSGSSALNHLKLGNVDLFVVKWLMPGVVV 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
                S++   +   +L K F +    + + M +  R+      P+  +  + G   G +
Sbjct: 93  GGFFGSVVAEWIPSQYLPKVFGVIVFFLSVQMFRSIRMQHHYPMPNALITTLCGTGIGVV 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S   G+GGG  +   +  +G  + KA  +S+     IA   ++  I  G+ ++ LP +S+
Sbjct: 153 SSLAGIGGGSLSVPFLNRHGIEMKKAVGSSSVCGFAIAISGMIGFILHGYQVDNLPQYSI 212

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V I A+L I   SIL T +  KL+  +    L   F++ +   +   
Sbjct: 213 GYVYIPALLAIASTSILTTRIGAKLATQMPTARLKRFFAVFLMCVAATM 261



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 20/127 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME- 88
               G +S L G+GGG + VP L++          I M  A+G+S       ++   +  
Sbjct: 146 GTGIGVVSSLAGIGGGSLSVPFLNR--------HGIEMKKAVGSSSVCGFAIAISGMIGF 197

Query: 89  -----------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G + +  L        +TT + + + + +  + L + FA+F + +
Sbjct: 198 ILHGYQVDNLPQYSIGYVYIPALLAIASTSILTTRIGAKLATQMPTARLKRFFAVFLMCV 257

Query: 138 GILMLKR 144
              ML +
Sbjct: 258 AATMLFQ 264


>gi|92114790|ref|YP_574718.1| hypothetical protein Csal_2672 [Chromohalobacter salexigens DSM
           3043]
 gi|91797880|gb|ABE60019.1| protein of unknown function DUF81 [Chromohalobacter salexigens DSM
           3043]
          Length = 270

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 119/255 (46%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              +      G  +GL GVGGG +MVPVL+  F L G      +HVA+GTS+  I PTS+
Sbjct: 9   LAYLALGGAVGIFAGLLGVGGGGIMVPVLTSLFALQGFPHDTLVHVALGTSMAAIVPTSL 68

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S   H R G +   +++     + + T + + + SHV  + L   FA F   + + ML 
Sbjct: 69  ASLRAHHRRGGVAWPVVRFITPGILLGTFLGTFLASHVPTTGLAVFFACFMAFVSLQMLI 128

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             +    R  P  +     G+  G +S  + +GGG  T   + +   ++ +A  TSA V 
Sbjct: 129 NLKPAPTRTLPGAWGISGVGLGIGGISALVAIGGGSLTVPFLTWCNVALRRAIGTSAAVG 188

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
             IA    L  + +GWG   LP  +LGF+   AV+ +  +S    PL  +L++ +    L
Sbjct: 189 LPIALAGALGYLINGWGEAALPAGTLGFIYWPAVVSMSIVSFFTAPLGARLAHRLPVAML 248

Query: 264 TIGFSMIMFTTSFVF 278
              F+ ++   S   
Sbjct: 249 KRIFAFVLMALSVKM 263



 Score = 44.3 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 20/130 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I       G +S L  +GGG + VP L+          ++ +  A+GTS  V  P ++  
Sbjct: 144 ISGVGLGIGGISALVAIGGGSLTVPFLTWC--------NVALRRAIGTSAAVGLPIALAG 195

Query: 86  FMEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G I    +     V   T  + + +   +  + L + FA  
Sbjct: 196 ALGYLINGWGEAALPAGTLGFIYWPAVVSMSIVSFFTAPLGARLAHRLPVAMLKRIFAFV 255

Query: 134 CLLMGILMLK 143
            + + + ML 
Sbjct: 256 LMALSVKMLF 265


>gi|251787692|ref|YP_003002413.1| hypothetical protein Dd1591_0041 [Dickeya zeae Ech1591]
 gi|247536313|gb|ACT04934.1| protein of unknown function DUF81 [Dickeya zeae Ech1591]
          Length = 268

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 63/249 (25%), Positives = 122/249 (48%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++++   +    + G ++GL G+GGG +MVPVL+  F   G++ +  +H+A+GTS+  I 
Sbjct: 3   IEWMLAYLALGAVVGFMAGLLGIGGGGIMVPVLTALFAAQGVETAHLVHLALGTSMAAIV 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T++ S   H +H  +   ++      + + T   + + + +    L   F+ F   + +
Sbjct: 63  ITAISSLRTHHQHQAVLWTVVWRITPAILVGTFAATWLAALLPTRALAIFFSCFMAYVSL 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M+   +    R+ P      + G+  G +S  + +GGG  T   + +    I +A  TS
Sbjct: 123 QMVLNIKPKPNRQLPGVPGMSLAGLTIGGISALVAIGGGSLTVPFLTWCNVRIQQAIGTS 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A V   IA    L  + +GW   GLP +S+G+V++ AV +I  +S    P+  +L++ + 
Sbjct: 183 AAVGLPIALSGALGYMINGWSATGLPAFSVGYVSLPAVALISAVSFFTAPVGARLAHRLP 242

Query: 260 KKYLTIGFS 268
              L   F+
Sbjct: 243 VATLKKAFA 251


>gi|198283044|ref|YP_002219365.1| hypothetical protein Lferr_0909 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|198247565|gb|ACH83158.1| protein of unknown function DUF81 [Acidithiobacillus ferrooxidans
           ATCC 53993]
          Length = 268

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 68/257 (26%), Positives = 121/257 (47%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + L + +  ++G +SG+ GVGGG+V+VP+L   F ++ I   +  H+A+GTSL  I 
Sbjct: 5   MNIVWLYLFSGAVAGIISGMLGVGGGIVLVPILIFIFGVLAIPVGMAAHMAIGTSLSTII 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ +     R   I+  +++       + ++++  +   +    L   F +F     +
Sbjct: 65  FTSMSAIHAQHRRKAIDWNLVRKLAPATILGSLISGYLAGLIPGQALKAIFGVFLAAAAV 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M    R    R  P        G   G LS  LG+GGG  T     +    + +A ATS
Sbjct: 125 QMFFEWRPAPYRTLPGPLALLGIGTGIGALSAMLGIGGGTLTVPFFNWCNVDLRRAIATS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +   +A    +  I SG+   GLP  S G+V++ A+L I   ++L  P    LSY + 
Sbjct: 185 TTLGFGLAIFGTIGFIVSGFQRPGLPSASFGYVSLPAMLGIASTAVLFAPFGVHLSYRLP 244

Query: 260 KKYLTIGFSMIMFTTSF 276
            + L   F++++   +F
Sbjct: 245 VRRLKRIFALLLLCLAF 261



 Score = 40.4 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           ++    G V G +SG LGVGGGI    +++F    +      +A ++   +   ++    
Sbjct: 9   WLYLFSGAVAGIISGMLGVGGGIVLVPILIFIFGVLAIPVGMAAHMAIGTSLSTIIFTSM 68

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           S              ++   V  + P +IL + ++  L+ +I  + L   F + +   + 
Sbjct: 69  SAIHAQHRRK----AIDWNLVRKLAPATILGSLISGYLAGLIPGQALKAIFGVFLAAAAV 124

Query: 277 VF 278
             
Sbjct: 125 QM 126


>gi|294788638|ref|ZP_06753880.1| putative membrane protein [Simonsiella muelleri ATCC 29453]
 gi|294483515|gb|EFG31200.1| putative membrane protein [Simonsiella muelleri ATCC 29453]
          Length = 268

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 133/255 (52%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +  +I++  L+G L+GL GVGGG ++VP++       G+      H+A+GTS  ++  
Sbjct: 5   EIMIALILSGALAGFLAGLLGVGGGTIIVPIVLWLLHKQGVVSEYTQHIALGTSFAIMIF 64

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T++ S     R  +IN +I+K     + I  ++ S +  ++   FL   F IF  L+ I 
Sbjct: 65  TTLSSAWAQHRKKSINWQIVKYLSPAVIIGGLLGSALSKYLPALFLKIFFVIFLYLIAIQ 124

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           ML + +    R+ P     +  G V G LS  +G+GGG  +   M +    I+ AT TSA
Sbjct: 125 MLLKLKPKPTRQLPQPAGLFGIGNVIGVLSSWVGIGGGSLSVPFMTYCNVPIHLATGTSA 184

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            ++  I+   L+  +YSGW + GLP  +LGFV +  V+ +   +++  PL  K+S+ +  
Sbjct: 185 ALAWTISVAGLMGYVYSGWHIQGLPEHTLGFVYLPVVVALSVCTVIFAPLGVKVSHQLSP 244

Query: 261 KYLTIGFSMIMFTTS 275
             L +   +++F  +
Sbjct: 245 DKLKMAMGILLFLIA 259


>gi|218665563|ref|YP_002425252.1| hypothetical protein AFE_0764 [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|218517776|gb|ACK78362.1| membrane protein, putative [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 264

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 68/257 (26%), Positives = 121/257 (47%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + L + +  ++G +SG+ GVGGG+V+VP+L   F ++ I   +  H+A+GTSL  I 
Sbjct: 1   MNIVWLYLFSGAVAGIISGMLGVGGGIVLVPILIFIFGVLAIPVGMAAHMAIGTSLSTII 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ +     R   I+  +++       + ++++  +   +    L   F +F     +
Sbjct: 61  FTSMSAIHAQHRRKAIDWNLVRKLAPATILGSLISGYLAGLIPGQALKAIFGVFLAAAAV 120

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M    R    R  P        G   G LS  LG+GGG  T     +    + +A ATS
Sbjct: 121 QMFFEWRPAPYRTLPGPLALLGIGTGIGALSAMLGIGGGTLTVPFFNWCNVDLRRAIATS 180

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +   +A    +  I SG+   GLP  S G+V++ A+L I   ++L  P    LSY + 
Sbjct: 181 TTLGFGLAIFGTIGFIVSGFQRPGLPSASFGYVSLPAMLGIASTAVLFAPFGVHLSYRLP 240

Query: 260 KKYLTIGFSMIMFTTSF 276
            + L   F++++   +F
Sbjct: 241 VRRLKRIFALLLLCLAF 257



 Score = 40.4 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           ++    G V G +SG LGVGGGI    +++F    +      +A ++   +   ++    
Sbjct: 5   WLYLFSGAVAGIISGMLGVGGGIVLVPILIFIFGVLAIPVGMAAHMAIGTSLSTIIFTSM 64

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           S              ++   V  + P +IL + ++  L+ +I  + L   F + +   + 
Sbjct: 65  SAIHAQHRRK----AIDWNLVRKLAPATILGSLISGYLAGLIPGQALKAIFGVFLAAAAV 120

Query: 277 VF 278
             
Sbjct: 121 QM 122


>gi|303256766|ref|ZP_07342780.1| putative membrane protein [Burkholderiales bacterium 1_1_47]
 gi|302860257|gb|EFL83334.1| putative membrane protein [Burkholderiales bacterium 1_1_47]
          Length = 271

 Score =  212 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 2/261 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L+ +    +G ++GL G+GGG+++ P L        I     +HVA+ TSL  IA
Sbjct: 3   LTTIGLMALLGCFTGFMAGLLGIGGGMIITPFLIMLIPSSLIPHEHIVHVAIATSLATIA 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ S   H + G +   ++      + +  VV + +   +   +L+  FA F      
Sbjct: 63  FTSLSSVRAHHKRGAVLWNVVASVAPGILVGAVVGAQIAGWLPTFWLSLIFAAFVGFSAF 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M        +R  P    K+  G+  G LS  +G GGG  +   M++    +  A ATS
Sbjct: 123 KMFLNKSPRPDRNLPGTIGKFFMGIAIGILSALVGAGGGFISVPWMIWCNVKMQNAVATS 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPW--SLGFVNIGAVLIILPISILITPLATKLSYM 257
           A     IA    +  I SGW ++GLPPW   LG++ I A+  +   S+L  PL  K+++ 
Sbjct: 183 AAFGFPIALFGTIGYIISGWNVSGLPPWPIDLGYICIPALFSVAITSVLFAPLGAKVAHS 242

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           I  K L   F+ ++       
Sbjct: 243 IDTKPLKKIFACLLCFVCLYM 263



 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 44/129 (34%), Gaps = 22/129 (17%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G LS L G GGG + VP +           ++ M  A+ TS     P ++   + +
Sbjct: 146 GIAIGILSALVGAGGGFISVPWMIWC--------NVKMQNAVATSAAFGFPIALFGTIGY 197

Query: 90  R--------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                            G I +  L        +   + + +   +D   L K FA    
Sbjct: 198 IISGWNVSGLPPWPIDLGYICIPALFSVAITSVLFAPLGAKVAHSIDTKPLKKIFACLLC 257

Query: 136 LMGILMLKR 144
            + + M+++
Sbjct: 258 FVCLYMIRQ 266


>gi|227326601|ref|ZP_03830625.1| hypothetical protein PcarcW_04479 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 268

 Score =  212 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 66/243 (27%), Positives = 123/243 (50%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V++I   +    + G ++GL G+GGG +MVPVL+  F   G++++  +H+A+GTS+  I 
Sbjct: 3   VEWIAAYLALGAVVGFMAGLLGIGGGGIMVPVLTALFAAQGVENTHLVHLALGTSMAAIV 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T++ S   H +H  +   ++      + I T   + + + +    L   F+ F   + +
Sbjct: 63  VTAISSLRTHHQHQAVLWPVVMRITPAILIGTFAATWLATLLPTRALAIFFSCFMAYVSL 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M+   +   +R+ P      + G+V G +S  + +GGG  T   + +    I +A  TS
Sbjct: 123 QMVLNIKPKPQRQLPGTAGVSLAGLVIGSISALVAIGGGSLTVPFLTWCNVRIQQAIGTS 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A V   IA    L  + +GW   GLP +S+G+V++ AVL+I  +S    P+  +L++ + 
Sbjct: 183 AAVGLPIALSGALGYMINGWSTTGLPDYSVGYVSLPAVLLISAVSFFTAPVGARLAHRLP 242

Query: 260 KKY 262
              
Sbjct: 243 VAT 245


>gi|27363981|ref|NP_759509.1| hypothetical protein VV1_0518 [Vibrio vulnificus CMCP6]
 gi|27360098|gb|AAO09036.1| Protein of unknown function DUF81 [Vibrio vulnificus CMCP6]
          Length = 263

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 126/258 (48%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + +++V     G ++GL G+GGGL++VP L       GI   + MH+A+ TSL  I  
Sbjct: 4   ELLSVLLVLGAFVGVMAGLLGIGGGLIVVPALLYLLPWAGIPTELSMHMALATSLASIIV 63

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS  S + H + G +++ ++K  +  + I   V + +   +   +L + F +  L + + 
Sbjct: 64  TSGSSALNHLKLGNVDIFVVKWLMPGVVIGGFVGANIAEWIPTQYLPRVFGVIVLFLALQ 123

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           M +  R+   R  P + V  ++G   G +S   G+GGG  +   +  +G  + KA  +S+
Sbjct: 124 MFRSIRVTTTRAMPSSPVTMLYGTGIGVVSSLAGIGGGSLSVPFLNRHGVEMRKAVGSSS 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
               +IA   +   I  G+ +  LP +S+G+V + A+L I   S+L T +  + +  +  
Sbjct: 184 VCGCVIAIAGMTGFILHGYSVASLPDYSVGYVYLPALLAIAGTSMLTTRIGARWATTLPT 243

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F++ +   +   
Sbjct: 244 AKLKKIFALFLMFVALSM 261



 Score = 42.8 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 4/117 (3%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVL----SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
               G +S L G+GGG + VP L     +  + +G        +A+    G I     ++
Sbjct: 146 GTGIGVVSSLAGIGGGSLSVPFLNRHGVEMRKAVGSSSVCGCVIAIAGMTGFILHGYSVA 205

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +     G + +  L        +TT + +   + +  + L K FA+F + + + ML
Sbjct: 206 SLPDYSVGYVYLPALLAIAGTSMLTTRIGARWATTLPTAKLKKIFALFLMFVALSML 262


>gi|37678861|ref|NP_933470.1| permease [Vibrio vulnificus YJ016]
 gi|37197602|dbj|BAC93441.1| predicted permease [Vibrio vulnificus YJ016]
          Length = 263

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 127/258 (49%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + +++V     G ++GL G+GGGL++VP L       GI   + MH+A+ TSL  I  
Sbjct: 4   ELLSVLLVLGAFVGVMAGLLGIGGGLIVVPALLYLLPWAGIPTELSMHMALATSLASIIV 63

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS  S + H + G +++ ++K  +  + I   V + +   +   +L + F +  L++ + 
Sbjct: 64  TSGSSALNHLKLGNVDIFVVKWLMPGVVIGGFVGANIAEWIPTQYLPRVFGVIVLVLALQ 123

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           M +  R+   R  P + V  ++G   G +S   G+GGG  +   +  +G  + KA  +S+
Sbjct: 124 MFRSIRVTTTRAMPSSPVTMLYGTGIGVVSSLAGIGGGSLSVPFLNRHGVEMRKAVGSSS 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
               +IA   +   I  G+ +  LP +S+G+V + A+L I   S+L T +  + +  +  
Sbjct: 184 VCGCVIAIAGMTGFILHGYSVASLPDYSVGYVYLPALLAIAGTSMLTTRIGARWATTLPT 243

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F++ +   +   
Sbjct: 244 AKLKKIFALFLMFVALSM 261



 Score = 42.8 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 4/117 (3%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVL----SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
               G +S L G+GGG + VP L     +  + +G        +A+    G I     ++
Sbjct: 146 GTGIGVVSSLAGIGGGSLSVPFLNRHGVEMRKAVGSSSVCGCVIAIAGMTGFILHGYSVA 205

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +     G + +  L        +TT + +   + +  + L K FA+F + + + ML
Sbjct: 206 SLPDYSVGYVYLPALLAIAGTSMLTTRIGARWATTLPTAKLKKIFALFLMFVALSML 262


>gi|239815526|ref|YP_002944436.1| hypothetical protein Vapar_2544 [Variovorax paradoxus S110]
 gi|239802103|gb|ACS19170.1| protein of unknown function DUF81 [Variovorax paradoxus S110]
          Length = 273

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 1/232 (0%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVP ++      G+   + + +A+ TS+  I  TSV S   H + G +   I++     +
Sbjct: 35  MVPFITIIMGHRGVASDLAVKMAIATSMATIIFTSVSSVRAHHKRGAVRWDIVRRLAPGI 94

Query: 108 PITTVVTSL-MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
            I +++ SL + + +  + L   FA+F       M    +    R+ P    +   G   
Sbjct: 95  VIGSLLGSLGVFALLKGTVLAIVFALFVGFSATQMFLDRKPKPTRQMPGTAGQLSAGGAI 154

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           GF+SG +G GGG  +   M +   SI+ A ATSA +   IA   +L  + SG  + GLP 
Sbjct: 155 GFISGLVGAGGGFVSVPFMTWCNISIHNAVATSAALGFPIAVANVLGYVVSGQSVQGLPA 214

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            S G++ + A+++I   S+L  PL  K ++ +  K L   F+ I++  +   
Sbjct: 215 GSFGYIWLPALVVIALCSVLTAPLGAKAAHNLPVKKLKRVFASILYLLAAYM 266



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + A    G +SGL G GGG V VP ++          +I +H A+ TS  +  P +V + 
Sbjct: 148 LSAGGAIGFISGLVGAGGGFVSVPFMTWC--------NISIHNAVATSAALGFPIAVANV 199

Query: 87  MEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           + +               G I +  L        +T  + +    ++    L + FA   
Sbjct: 200 LGYVVSGQSVQGLPAGSFGYIWLPALVVIALCSVLTAPLGAKAAHNLPVKKLKRVFASIL 259

Query: 135 LLMGILMLKR 144
            L+   ML +
Sbjct: 260 YLLAAYMLWK 269


>gi|254673120|emb|CBA07877.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
 gi|308389437|gb|ADO31757.1| hypothetical protein NMBB_1455 [Neisseria meningitidis alpha710]
          Length = 268

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFTMMPGMVFGVFAGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   R    R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGRQTASRPLPKLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKKSFGIMLLLIA 260



 Score = 43.5 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G   GF++G  GVGGG     ++L+         +  + + A  TS  V    A
Sbjct: 8   LILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   V  ++P  +         +  I    L I F
Sbjct: 68  FSSMLG------------QHKKQAVDWKTVFTMMPGMVFGVFAGALSAKYIPAFGLQIFF 115

Query: 268 SMIMFTTSFV 277
            + +   +F 
Sbjct: 116 ILFLTAVAFK 125



 Score = 38.9 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L GT+S   G+GGG + VP L               H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGTMSSWVGIGGGSLSVPFLIHC--------GFPAHKAIGTSSGLAWPIALSG 195

Query: 86  FMEHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +  +G             + +  +            +       +  + L K+F I 
Sbjct: 196 AISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|218768339|ref|YP_002342851.1| hypothetical protein NMA1533 [Neisseria meningitidis Z2491]
 gi|121052347|emb|CAM08679.1| conserved hypothetical integral membrane protein [Neisseria
           meningitidis Z2491]
 gi|254670718|emb|CBA06902.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
 gi|319410585|emb|CBY90954.1| conserved hypothetical integral membrane protein [Neisseria
           meningitidis WUE 2594]
 gi|325130391|gb|EGC53156.1| putative membrane protein [Neisseria meningitidis OX99.30304]
 gi|325136178|gb|EGC58786.1| putative membrane protein [Neisseria meningitidis M0579]
 gi|325201971|gb|ADY97425.1| putative membrane protein [Neisseria meningitidis M01-240149]
 gi|325205909|gb|ADZ01362.1| putative membrane protein [Neisseria meningitidis M04-240196]
 gi|325208278|gb|ADZ03730.1| putative membrane protein [Neisseria meningitidis NZ-05/33]
          Length = 268

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFTMMPGMVFGVFAGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L  D     R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTDPQTASRPLPGLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKKSFGIMLLLIA 260



 Score = 43.5 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G   GF++G  GVGGG     ++L+         +  + + A  TS  V    A
Sbjct: 8   LILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   V  ++P  +         +  I    L I F
Sbjct: 68  FSSMLG------------QHKKQAVDWKTVFTMMPGMVFGVFAGALSAKYIPAFGLQIFF 115

Query: 268 SMIMFTTSFV 277
            + +   +F 
Sbjct: 116 ILFLTAVAFK 125



 Score = 39.3 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L GT+S   G+GGG + VP L               H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGTMSSWVGIGGGSLSVPFLIHC--------GFPAHKAIGTSSGLAWPIALSG 195

Query: 86  FMEHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +  +G             + +  +            +       +  + L K+F I 
Sbjct: 196 AISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|227115348|ref|ZP_03829004.1| hypothetical protein PcarbP_20437 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 268

 Score =  211 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 123/243 (50%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V+++   +    + G ++GL G+GGG +MVPVL+  F   G++++  +H+A+GTS+  I 
Sbjct: 3   VEWVAAYLALGAVVGFMAGLLGIGGGGIMVPVLTALFAAQGVENTHLVHLALGTSMAAIV 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T++ S   H +H  +   ++      + I T   + + + +    L   F+ F   + +
Sbjct: 63  VTAISSLRTHHQHQAVLWPVVMRITPAILIGTFAATWLATLLPTRALAIFFSCFMAYVSL 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M+   +   +R+ P      + G+V G +S  + +GGG  T   + +    I +A  TS
Sbjct: 123 QMVMNIKPKPQRQLPGTVGVSLAGLVIGSISALVAIGGGSLTVPFLTWCNVRIQQAIGTS 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A V   IA    L  + +GW   GLP +S+G+V++ AVL+I  +S    P+  +L++ + 
Sbjct: 183 AAVGLPIALSGALGYMINGWSTTGLPDYSVGYVSLPAVLLISAVSFFTAPVGARLAHRLP 242

Query: 260 KKY 262
              
Sbjct: 243 VAT 245


>gi|153820134|ref|ZP_01972801.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126509326|gb|EAZ71920.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
          Length = 260

 Score =  211 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 104/229 (45%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       GI   I M +A+ TSL  I  TS  S + H + G +++ ++K  +  + +
Sbjct: 29  PALLFLLPYAGISTEIVMQLALATSLATIILTSGSSALNHLKLGNVDVFVVKWLMPGVVV 88

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
              + S++   +   +L K F +  L + + M +  R       P  ++  + G   G +
Sbjct: 89  GGFLGSVVAEWIPSQYLPKVFGVIVLCLSVQMYRSIRALQNHPMPSAWITTLCGTGIGVI 148

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S   G+GGG  +   +  +G  + KA  +S+     IA   ++  I  G+ +  LP +SL
Sbjct: 149 SSLAGIGGGSLSVPFLNRHGIEMKKAIGSSSVCGFAIAISGMIGFILHGYQVENLPQYSL 208

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V + A+L I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 209 GYVYLPALLAIATTSMLTTRIGAKLATQMPTARLKRFFAIFLMCVAVTM 257



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 20/133 (15%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  +     G +S L G+GGG + VP L++          I M  A+G+S       ++
Sbjct: 136 WITTLCGTGIGVISSLAGIGGGSLSVPFLNR--------HGIEMKKAIGSSSVCGFAIAI 187

Query: 84  MSFME------------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
              +                 G + +  L        +TT + + + + +  + L + FA
Sbjct: 188 SGMIGFILHGYQVENLPQYSLGYVYLPALLAIATTSMLTTRIGAKLATQMPTARLKRFFA 247

Query: 132 IFCLLMGILMLKR 144
           IF + + + ML +
Sbjct: 248 IFLMCVAVTMLFQ 260


>gi|311105116|ref|YP_003977969.1| hypothetical protein AXYL_01921 [Achromobacter xylosoxidans A8]
 gi|310759805|gb|ADP15254.1| hypothetical protein AXYL_01921 [Achromobacter xylosoxidans A8]
          Length = 272

 Score =  211 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 66/260 (25%), Positives = 126/260 (48%), Gaps = 1/260 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  +  ++V   + G  +GL G+GGG+++VP L+  F   G+   + +H A+ TS+  I 
Sbjct: 3   VTMVICLLVLGGVVGFAAGLLGIGGGMLLVPFLTMLFAWKGMPADLVVHAAIATSMTSIL 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV-TSLMISHVDKSFLNKAFAIFCLLMG 138
            TS+ S   H++ GTI   I+      + +  ++    + + +   +L+  FA+F    G
Sbjct: 63  FTSISSVRAHQQRGTIKWNIVWAMAPGIIVGGLLSGGAVFAALSTLWLSLFFALFVGYSG 122

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             ML+  +    R+ P        G   GFLSG +G GGG  +   M++   +++ A +T
Sbjct: 123 WSMLQNKKPKPSRQMPGVVGTSAAGAGIGFLSGLVGAGGGFLSVPFMVWCNVALHNAVST 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           SA +   IA    +  + SG       P  LG++   A++ ++  S+L  PL  ++++ +
Sbjct: 183 SAALGFPIALANSVGYVVSGLNSGEARPGMLGYIYWPALIALVCTSVLTAPLGARMAHRL 242

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
             + L   F+ ++F  +   
Sbjct: 243 PVQTLKRVFACLLFALAAYM 262



 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
            A    G LSGL G GGG + VP +           ++ +H A+ TS  +  P ++ + +
Sbjct: 145 AAGAGIGFLSGLVGAGGGFLSVPFMVWC--------NVALHNAVSTSAALGFPIALANSV 196

Query: 88  EHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            +               G I    L   +    +T  + + M   +    L + FA    
Sbjct: 197 GYVVSGLNSGEARPGMLGYIYWPALIALVCTSVLTAPLGARMAHRLPVQTLKRVFACLLF 256

Query: 136 LMGILMLKR 144
            +   ML +
Sbjct: 257 ALAAYMLFK 265


>gi|316984120|gb|EFV63098.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
 gi|325140457|gb|EGC62978.1| putative membrane protein [Neisseria meningitidis CU385]
 gi|325200056|gb|ADY95511.1| putative membrane protein [Neisseria meningitidis H44/76]
          Length = 268

 Score =  211 bits (538), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFTMMPGMIFGVFTGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L  D     R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTDPQTASRPLPGLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKKSFGIMLLLIA 260



 Score = 43.5 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G   GF++G  GVGGG     ++L+         +  + + A  TS  V    A
Sbjct: 8   LILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   V  ++P  I         +  I    L I F
Sbjct: 68  FSSMLG------------QHKKQAVDWKTVFTMMPGMIFGVFTGALSAKYIPAFGLQIFF 115

Query: 268 SMIMFTTSFV 277
            + +   +F 
Sbjct: 116 ILFLTAVAFK 125



 Score = 39.3 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L GT+S   G+GGG + VP L               H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGTMSSWVGIGGGSLSVPFLIHC--------GFPAHKAIGTSSGLAWPIALSG 195

Query: 86  FMEHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +  +G             + +  +            +       +  + L K+F I 
Sbjct: 196 AISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|94266537|ref|ZP_01290224.1| Protein of unknown function DUF81 [delta proteobacterium MLMS-1]
 gi|93452838|gb|EAT03361.1| Protein of unknown function DUF81 [delta proteobacterium MLMS-1]
          Length = 265

 Score =  211 bits (538), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 79/260 (30%), Positives = 130/260 (50%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  I L +    ++G L+GL G+GGGLV+VP+L  AF   G+  +  MH+A+GTSL  I
Sbjct: 1   MLTVIALYLGLGAVAGILAGLLGIGGGLVIVPLLVFAFSWQGLPAAHLMHLALGTSLASI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS+ SF+ H R G +   +++     + + T   S + + +  +FL   FA+F   + 
Sbjct: 61  IFTSISSFLAHHRRGAVYWPVVRGVAPGVVLGTFAGSFVAAALSTTFLQVFFALFLYFVC 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             ML   R    R  P        G   G  S  +G+GGG  +   ML+    I++A  T
Sbjct: 121 WQMLSGRRPQPGRSLPGAAGLNAAGGGIGIFSSLVGIGGGTLSVPFMLWCNIGIHQAIGT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           SA +   IA       + +GW    LP WSLG++ + A+L I+  S+L  PL  +L++ +
Sbjct: 181 SAAIGFPIAVAGTAGYLINGWQSTALPAWSLGYLYLPALLGIVAASVLTAPLGVRLAHSL 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++++   +   
Sbjct: 241 PVASLKKIFALLLLLVATRM 260



 Score = 43.1 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 20/120 (16%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH----- 89
             S L G+GGG + VP +           +I +H A+GTS  +  P +V     +     
Sbjct: 150 IFSSLVGIGGGTLSVPFMLWC--------NIGIHQAIGTSAAIGFPIAVAGTAGYLINGW 201

Query: 90  -------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                     G + +  L   +    +T  +   +   +  + L K FA+  LL+   ML
Sbjct: 202 QSTALPAWSLGYLYLPALLGIVAASVLTAPLGVRLAHSLPVASLKKIFALLLLLVATRML 261


>gi|309379248|emb|CBX22205.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 268

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 64/256 (25%), Positives = 115/256 (44%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           + I L++     SG ++GLFGVGGG ++VPV+       G+       H+A+GTS  V+ 
Sbjct: 5   EIILLLLSVGSASGFIAGLFGVGGGALIVPVVLWVLGYQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   I  +     + SL   ++   +L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFMMIPGMIFGVFLGSLSAKYIPTFWLQIFFILFFTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L           P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 RTLHSGHQTASHPLPKLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIRCGFPTHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G+S  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLSWPIALAGAISYLLNGLKVGGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHHLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKKSFGIMLLLIA 260



 Score = 43.1 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G  +GF++G  GVGGG     ++L+         +  + + A  TS  V    A
Sbjct: 8   LLLLSVGSASGFIAGLFGVGGGALIVPVVLWVLGYQGLAQHPYAQHLAVGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   V +++P  I    L +  +  I   +L I F
Sbjct: 68  FSSMLG------------QHKKQAVDWKTVFMMIPGMIFGVFLGSLSAKYIPTFWLQIFF 115

Query: 268 SMIMFTTSFV 277
            +     +F 
Sbjct: 116 ILFFTAVAFR 125



 Score = 38.9 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 49/131 (37%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L GT+S   G+GGG + VP L +             H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGTMSSWVGIGGGSLSVPFLIRC--------GFPTHKAIGTSSGLSWPIALAG 195

Query: 86  FMEHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +  +G             + +  +            +      H+  + L K+F I 
Sbjct: 196 AISYLLNGLKVGGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHHLSSAKLKKSFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|144899983|emb|CAM76847.1| conserved hypothetical protein, membrane [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 275

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 87/270 (32%), Positives = 136/270 (50%), Gaps = 1/270 (0%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M     D V+     + +    +G ++GL GVGGG+V+VPVL   F ++G+D+++ MHVA
Sbjct: 1   MPSWPLDQVLPLAIALPLVGIAAGLIAGLLGVGGGIVIVPVLYHVFTVLGLDEAVRMHVA 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL  I  TS  S+  H R G ++  +L+ W   + +   + SL    V    L   F
Sbjct: 61  VGTSLATIIATSTSSWRSHARKGAVDRDLLRSWGPFILVGVAIGSLAAGWVKGPVLTGIF 120

Query: 131 AIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
           A F LL+ + M   R         P    K     + G  S  +G+GGG F    +  +G
Sbjct: 121 AGFALLVSLHMAFGRPEWRLGHSLPTGAAKAGLAALIGGCSAMMGIGGGTFAVPTLTLFG 180

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             I++A  T++ +  +I  P  L  I +GW    LPP+SLG+VN+  V  ILP S+   P
Sbjct: 181 TPIHRAVGTASAIGLIIGIPGTLGFILTGWNAAQLPPFSLGYVNLLGVAAILPTSMAAAP 240

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              +L++ +  + L   F++ +F TS   A
Sbjct: 241 WGARLAHSLDTRLLRRAFAVFLFLTSLRMA 270


>gi|71065697|ref|YP_264424.1| hypothetical protein Psyc_1139 [Psychrobacter arcticus 273-4]
 gi|71038682|gb|AAZ18990.1| probable integral membrane protein, DUF81 family [Psychrobacter
           arcticus 273-4]
          Length = 268

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 1/255 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
                ++A   +G  +GLFGVGGG+++VPVL   F        +  H+A+GTSL  I  T
Sbjct: 3   LYVWFVIAGAFAGVCAGLFGVGGGMIIVPVLVWIFTAYHFSPEVVTHLAIGTSLATIIVT 62

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H + G +   I ++    L I +++ + +   +D   L     +  LL+   M
Sbjct: 63  SISSLTAHNKRGGVRWDIWRNMALGLVIGSLIGAGVADAIDGDVLQAIIGVGALLISFRM 122

Query: 142 LK-RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           L   ++    +  P   +++  G   G  S   G+GGG  T   + + G S+ ++  T+A
Sbjct: 123 LFFSNKEQPSKPLPPIGIQFGAGASIGLASSIFGIGGGSLTVPFLNWVGLSMKQSIGTAA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    +   + G  +  LP  ++GFV+I   L I   S +   +  KL++ +  
Sbjct: 183 ACGLPIALAGAVGFAWFGKDMMNLPDGTIGFVHITGFLFISAASFITAKVGAKLAHQLPA 242

Query: 261 KYLTIGFSMIMFTTS 275
             L   F +++    
Sbjct: 243 LMLKRAFGILLLFAG 257



 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 47/134 (35%), Gaps = 20/134 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I +   A    G  S +FG+GGG + VP L+           + M  ++GT+     P +
Sbjct: 138 IGIQFGAGASIGLASSIFGIGGGSLTVPFLNWV--------GLSMKQSIGTAAACGLPIA 189

Query: 83  VMSFMEHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +   +     G             +++           IT  V + +   +    L +AF
Sbjct: 190 LAGAVGFAWFGKDMMNLPDGTIGFVHITGFLFISAASFITAKVGAKLAHQLPALMLKRAF 249

Query: 131 AIFCLLMGILMLKR 144
            I  L  G  +L  
Sbjct: 250 GILLLFAGGQLLLS 263


>gi|93005178|ref|YP_579615.1| hypothetical protein Pcryo_0347 [Psychrobacter cryohalolentis K5]
 gi|92392856|gb|ABE74131.1| protein of unknown function DUF81 [Psychrobacter cryohalolentis K5]
          Length = 268

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 1/255 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
                ++A   +G  +GLFGVGGG+++VP L   F        +  H+A+GTSL  I  T
Sbjct: 3   LYVWFVIAGAFAGVSAGLFGVGGGMIIVPALVWIFAAYNFPPEVVTHLAIGTSLATIVVT 62

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H + G +  ++ +     L I ++V + +   +D   L     +  LL+ + M
Sbjct: 63  SISSLTAHNKRGGVRWEVWRKMALGLVIGSLVGAGIADMIDGKVLQAIIGVGALLVALKM 122

Query: 142 LK-RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
               ++    +  P   V++  G   G  S   G+GGG  T   + + G  + ++  TSA
Sbjct: 123 FFFSNKEQLGKPLPSVGVQFGAGTGIGMASSIFGIGGGSLTVPFLNWAGLPMKQSVGTSA 182

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA        + G  +  +P  ++GFV+I   L I   S  +  +  KL++++  
Sbjct: 183 ACGLPIALAGAAGFAWFGQDVVNMPEGTIGFVHITGFLCISVASFAMAKVGAKLAHILPA 242

Query: 261 KYLTIGFSMIMFTTS 275
             L   F +++    
Sbjct: 243 LTLKRAFGILLLFAG 257



 Score = 38.5 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 47/128 (36%), Gaps = 20/128 (15%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A    G  S +FG+GGG + VP L+ A         + M  ++GTS     P ++     
Sbjct: 144 AGTGIGMASSIFGIGGGSLTVPFLNWA--------GLPMKQSVGTSAACGLPIALAGAAG 195

Query: 89  HRRHGTINMKILKDWIFVLPITTVV------------TSLMISHVDKSFLNKAFAIFCLL 136
               G   + + +  I  + IT  +             + +   +    L +AF I  L 
Sbjct: 196 FAWFGQDVVNMPEGTIGFVHITGFLCISVASFAMAKVGAKLAHILPALTLKRAFGILLLF 255

Query: 137 MGILMLKR 144
            G  +L  
Sbjct: 256 AGGQLLLS 263


>gi|118579808|ref|YP_901058.1| hypothetical protein Ppro_1384 [Pelobacter propionicus DSM 2379]
 gi|118502518|gb|ABK99000.1| protein of unknown function DUF81 [Pelobacter propionicus DSM 2379]
          Length = 264

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 102/229 (44%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L  AF   G  ++  +H+A+GTSL  I  TSV S   H     ++  +++     +  
Sbjct: 31  PLLVFAFSGQGFPEAHLLHMALGTSLATIMFTSVASMRAHHSRNAVDWPVVRRISPGIVA 90

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T + S + +H+   FL   F  F   +   ML        R+ P +      G + G +
Sbjct: 91  GTFLGSWVAAHLTTGFLKIFFTCFMYFVAAQMLLNVSPPAGRRIPGSSGLIGAGSLIGMV 150

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   + +       A  TSA +   IA    +  I +G  +  LP  SL
Sbjct: 151 SSLVGIGGGTLSVPFLQWCNLPFKTAIGTSAAIGFPIALAGTVGYIVNGLFVPDLPTASL 210

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           GF+++ A++ +   S L  PL  +L++ +    L   F++++  T    
Sbjct: 211 GFIHLPALVGVAAASFLTAPLGARLAHSLPVPKLKKIFALLLIATGTKM 259



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 50/131 (38%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I A  L G +S L G+GGG + VP L           ++    A+GTS  +  P ++  
Sbjct: 140 LIGAGSLIGMVSSLVGIGGGTLSVPFLQWC--------NLPFKTAIGTSAAIGFPIALAG 191

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G I++  L        +T  + + +   +    L K FA+ 
Sbjct: 192 TVGYIVNGLFVPDLPTASLGFIHLPALVGVAAASFLTAPLGARLAHSLPVPKLKKIFALL 251

Query: 134 CLLMGILMLKR 144
            +  G  ML  
Sbjct: 252 LIATGTKMLFS 262


>gi|261401261|ref|ZP_05987386.1| putative membrane protein [Neisseria lactamica ATCC 23970]
 gi|269208743|gb|EEZ75198.1| putative membrane protein [Neisseria lactamica ATCC 23970]
          Length = 268

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 64/256 (25%), Positives = 115/256 (44%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           + I L++     SG ++GLFGVGGG ++VPV+       G+       H+A+GTS  V+ 
Sbjct: 5   EIILLLLSVGSASGFIAGLFGVGGGALIVPVVLWVLGYQGLAQHPYAQHLAIGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   I  +     + SL   ++   +L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFMMIPGMIFGVFLGSLSAKYIPTFWLQIFFILFFTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L           P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 RTLHSGHQTASHPLPKLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIRCGFPTHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G+S  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLSWPIALAGAISYLLNGLKVGGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHHLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKKSFGIMLLLIA 260



 Score = 42.8 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G  +GF++G  GVGGG     ++L+         +  + + A  TS  V    A
Sbjct: 8   LLLLSVGSASGFIAGLFGVGGGALIVPVVLWVLGYQGLAQHPYAQHLAIGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   V +++P  I    L +  +  I   +L I F
Sbjct: 68  FSSMLG------------QHKKQAVDWKTVFMMIPGMIFGVFLGSLSAKYIPTFWLQIFF 115

Query: 268 SMIMFTTSFV 277
            +     +F 
Sbjct: 116 ILFFTAVAFR 125



 Score = 38.9 bits (90), Expect = 0.84,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 49/131 (37%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L GT+S   G+GGG + VP L +             H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGTMSSWVGIGGGSLSVPFLIRC--------GFPTHKAIGTSSGLSWPIALAG 195

Query: 86  FMEHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +  +G             + +  +            +      H+  + L K+F I 
Sbjct: 196 AISYLLNGLKVGGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHHLSSAKLKKSFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|253690529|ref|YP_003019719.1| hypothetical protein PC1_4169 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251757107|gb|ACT15183.1| protein of unknown function DUF81 [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 268

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 122/243 (50%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V++I   +    + G ++GL G+GGG +MVPVL+  F   G++++  +H+A+GTS+  I 
Sbjct: 3   VEWIAAYLALGAVVGFMAGLLGIGGGGIMVPVLTALFAAQGVENTHLVHLALGTSMAAIV 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T++ S   H +H  +   ++      + I T   + + + +    L   F+ F   + +
Sbjct: 63  VTAISSLRTHHQHQAVLWPVVMRITPAILIGTFAATWLATLLPTRALAIFFSCFMAYVSL 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M+   +   +R+ P      + G+V G +S  + +GGG  T   + +    I +A  TS
Sbjct: 123 QMVLNIKPKPQRQLPGTAGISLAGLVIGSISALVAIGGGSLTVPFLTWCNVRIQQAIGTS 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A V   IA    L  + +GW   GLP +S+G+V++ AV +I  +S    P+  +L++ + 
Sbjct: 183 AAVGLPIAVSGALGYLINGWSTTGLPDYSVGYVSLPAVFLISAVSFFTAPVGARLAHRLP 242

Query: 260 KKY 262
              
Sbjct: 243 VAT 245


>gi|304387373|ref|ZP_07369565.1| protein of hypothetical function DUF81 [Neisseria meningitidis ATCC
           13091]
 gi|304338624|gb|EFM04742.1| protein of hypothetical function DUF81 [Neisseria meningitidis ATCC
           13091]
          Length = 268

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFAMMPGMIFGVFTGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L  D     R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTDPQTASRPLPGLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKKSFGIMLLLIA 260



 Score = 43.9 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G   GF++G  GVGGG     ++L+         +  + + A  TS  V    A
Sbjct: 8   LILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   V  ++P  I         +  I    L I F
Sbjct: 68  FSSMLG------------QHKKQAVDWKTVFAMMPGMIFGVFTGALSAKYIPAFGLQIFF 115

Query: 268 SMIMFTTSFV 277
            + +   +F 
Sbjct: 116 ILFLTAVAFK 125



 Score = 38.9 bits (90), Expect = 0.76,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L GT+S   G+GGG + VP L               H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGTMSSWVGIGGGSLSVPFLIHC--------GFPAHKAIGTSSGLAWPIALSG 195

Query: 86  FMEHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +  +G             + +  +            +       +  + L K+F I 
Sbjct: 196 AISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|330999115|ref|ZP_08322836.1| hypothetical protein HMPREF9439_00458 [Parasutterella
           excrementihominis YIT 11859]
 gi|329575504|gb|EGG57043.1| hypothetical protein HMPREF9439_00458 [Parasutterella
           excrementihominis YIT 11859]
          Length = 263

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 116/255 (45%), Gaps = 2/255 (0%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +    +G ++GL G+GGG+++ P L        I     +HVA+ TSL  IA TS+ S
Sbjct: 1   MALLGCFTGFMAGLLGIGGGMIITPFLIMLIPSSLIPHEHIVHVAIATSLATIAFTSLSS 60

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H + G +   ++      + +  VV + +   +   +L+  FA F       M    
Sbjct: 61  VRAHHKRGAVLWNVVASVAPGILVGAVVGAQIAGWLPTFWLSLIFAAFVGFSAFKMFLNK 120

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
               +R  P    K+  G+  G L+  +G GGG  +   M++    +  A ATSA     
Sbjct: 121 SPRPDRNLPGTIGKFFMGIAIGILAALVGAGGGFISVPWMIWCNVKMQNAVATSAAFGFP 180

Query: 206 IAFPALLVRIYSGWGLNGLPPW--SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           IA    +  I SGW ++GLPPW   LG++ I A+  +   S+L  PL  K+++ I  K L
Sbjct: 181 IALFGTIGYIISGWNVSGLPPWPIDLGYICIPALFSVAITSVLFAPLGAKVAHSIDTKPL 240

Query: 264 TIGFSMIMFTTSFVF 278
              F+ ++       
Sbjct: 241 KKIFACLLCFVCLYM 255



 Score = 45.1 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 22/129 (17%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G L+ L G GGG + VP +           ++ M  A+ TS     P ++   + +
Sbjct: 138 GIAIGILAALVGAGGGFISVPWMIWC--------NVKMQNAVATSAAFGFPIALFGTIGY 189

Query: 90  R--------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                            G I +  L        +   + + +   +D   L K FA    
Sbjct: 190 IISGWNVSGLPPWPIDLGYICIPALFSVAITSVLFAPLGAKVAHSIDTKPLKKIFACLLC 249

Query: 136 LMGILMLKR 144
            + + M+++
Sbjct: 250 FVCLYMIRQ 258


>gi|261392401|emb|CAX49943.1| conserved hypothetical integral membrane protein [Neisseria
           meningitidis 8013]
 gi|325142511|gb|EGC64912.1| putative membrane protein [Neisseria meningitidis 961-5945]
 gi|325198469|gb|ADY93925.1| putative membrane protein [Neisseria meningitidis G2136]
          Length = 268

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFAMMPGMIFGVFTGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L  D     R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTDPQTASRPLPGLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKKSFGIMLLLIA 260



 Score = 43.9 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G   GF++G  GVGGG     ++L+         +  + + A  TS  V    A
Sbjct: 8   LILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   V  ++P  I         +  I    L I F
Sbjct: 68  FSSMLG------------QHKKQAVDWKTVFAMMPGMIFGVFTGALSAKYIPAFGLQIFF 115

Query: 268 SMIMFTTSFV 277
            + +   +F 
Sbjct: 116 ILFLTAVAFK 125



 Score = 38.9 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L GT+S   G+GGG + VP L               H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGTMSSWVGIGGGSLSVPFLIHC--------GFPAHKAIGTSSGLAWPIALSG 195

Query: 86  FMEHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +  +G             + +  +            +       +  + L K+F I 
Sbjct: 196 AISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|121635030|ref|YP_975275.1| hypothetical protein NMC1256 [Neisseria meningitidis FAM18]
 gi|120866736|emb|CAM10489.1| conserved hypothetical integral membrane protein [Neisseria
           meningitidis FAM18]
 gi|325132482|gb|EGC55175.1| putative membrane protein [Neisseria meningitidis M6190]
 gi|325138256|gb|EGC60825.1| putative membrane protein [Neisseria meningitidis ES14902]
          Length = 268

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKRAVDWKTVFAMMPGMIFGVFTGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   R    R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGRQTASRPLPKLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKKSFGIMLLLIA 260



 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G   GF++G  GVGGG     ++L+         +  + + A  TS  V    A
Sbjct: 8   LILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   V  ++P  I         +  I    L I F
Sbjct: 68  FSSMLG------------QHKKRAVDWKTVFAMMPGMIFGVFTGALSAKYIPAFGLQIFF 115

Query: 268 SMIMFTTSFV 277
            + +   +F 
Sbjct: 116 ILFLTAVAFK 125



 Score = 38.9 bits (90), Expect = 0.76,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L GT+S   G+GGG + VP L               H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGTMSSWVGIGGGSLSVPFLIHC--------GFPAHKAIGTSSGLAWPIALSG 195

Query: 86  FMEHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +  +G             + +  +            +       +  + L K+F I 
Sbjct: 196 AISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|313668456|ref|YP_004048740.1| hypothetical protein NLA_11540 [Neisseria lactamica ST-640]
 gi|313005918|emb|CBN87375.1| conserved hypothetical integral membrane protein [Neisseria
           lactamica 020-06]
          Length = 268

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 64/256 (25%), Positives = 115/256 (44%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           + I L++     SG ++GLFGVGGG ++VPV+     L G+        +A+GTS  V+ 
Sbjct: 5   EIILLLLSVGSASGFIAGLFGVGGGALIVPVVLWVLDLQGLAQHPYAQQLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +     + SL   ++   +L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFMMMPGMIFGVFLGSLSAKYIPTFWLQIFFILFFTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L           P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 RTLHSGHQTASHPLPKLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIRCGFPTHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G+S  IA    +  + +G  + GLP  SLGF+ + AV I+   +I   PL  K ++ + 
Sbjct: 185 SGLSWPIALAGAISYLLNGLKVGGLPEGSLGFLYLPAVAILSAATIAFAPLGVKTAHHLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKKSFGIMLLLIA 260



 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 47/130 (36%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G  +GF++G  GVGGG     ++L+         +  +   A  TS  V    A
Sbjct: 8   LLLLSVGSASGFIAGLFGVGGGALIVPVVLWVLDLQGLAQHPYAQQLAVGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   V +++P  I    L +  +  I   +L I F
Sbjct: 68  FSSMLG------------QHKKQAVDWKTVFMMMPGMIFGVFLGSLSAKYIPTFWLQIFF 115

Query: 268 SMIMFTTSFV 277
            +     +F 
Sbjct: 116 ILFFTAVAFR 125



 Score = 39.3 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 49/131 (37%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L GT+S   G+GGG + VP L +             H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGTMSSWVGIGGGSLSVPFLIRC--------GFPTHKAIGTSSGLSWPIALAG 195

Query: 86  FMEHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +  +G             + +  +            +      H+  + L K+F I 
Sbjct: 196 AISYLLNGLKVGGLPEGSLGFLYLPAVAILSAATIAFAPLGVKTAHHLSSAKLKKSFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|254509419|ref|ZP_05121500.1| thymidylate synthase [Vibrio parahaemolyticus 16]
 gi|219547656|gb|EED24700.1| thymidylate synthase [Vibrio parahaemolyticus 16]
          Length = 264

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 72/256 (28%), Positives = 127/256 (49%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +++  L+++   + G ++GL G+GGGL++VP L     + GID +I M +A+ TSL  I 
Sbjct: 4   IEFFALLLLLGSVVGIMAGLLGIGGGLIVVPALMFLLPMAGIDANIAMQMALATSLASII 63

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  S   H + G ++M ++K  +  + I   + + +   V   +L K F +  L + I
Sbjct: 64  VTSGSSAYNHFKLGNVDMFVVKWLMPGVVIGGFLGANVAEWVPSQYLPKVFGVIVLCLSI 123

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            ML   R   +R  P++ V    G   G +S   G+GGG  +   +  +G  + KA  +S
Sbjct: 124 QMLFSIRGKTQRSMPNSSVTMAIGAGIGMVSSLAGIGGGSLSVPFLNRHGIEMRKAVGSS 183

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +     IA   +L  I  G+    LP +SLG+V + A++ I   S+L T    +L+  + 
Sbjct: 184 SVCGCFIALSGMLGFILHGYKAEVLPAYSLGYVYLPALVGITATSMLTTRFGARLASSMP 243

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F++ +   +
Sbjct: 244 TVRLKKIFALFLIFVA 259



 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 20/129 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +      G +S L G+GGG + VP L++          I M  A+G+S       ++   
Sbjct: 144 MAIGAGIGMVSSLAGIGGGSLSVPFLNR--------HGIEMRKAVGSSSVCGCFIALSGM 195

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G + +  L        +TT   + + S +    L K FA+F 
Sbjct: 196 LGFILHGYKAEVLPAYSLGYVYLPALVGITATSMLTTRFGARLASSMPTVRLKKIFALFL 255

Query: 135 LLMGILMLK 143
           + +   ML 
Sbjct: 256 IFVAGTMLL 264


>gi|254805118|ref|YP_003083339.1| hypothetical protein NMO_1159 [Neisseria meningitidis alpha14]
 gi|254668660|emb|CBA06336.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
          Length = 268

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFAMMPGMIFGVFTGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L  D     R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTDPQTASRPLPGLPGLTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKKSFGIMLLLIA 260



 Score = 43.5 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G   GF++G  GVGGG     ++L+         +  + + A  TS  V    A
Sbjct: 8   LILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   V  ++P  I         +  I    L I F
Sbjct: 68  FSSMLG------------QHKKQAVDWKTVFAMMPGMIFGVFTGALSAKYIPAFGLQIFF 115

Query: 268 SMIMFTTSFV 277
            + +   +F 
Sbjct: 116 ILFLTAVAFK 125



 Score = 38.5 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 46/131 (35%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L G +S   G+GGG + VP L               H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGAMSSWVGIGGGSLSVPFLIHC--------GFPAHKAIGTSSGLAWPIALSG 195

Query: 86  FMEHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +  +G             + +  +            +       +  + L K+F I 
Sbjct: 196 AISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|192362299|ref|YP_001984115.1| hypothetical protein CJA_3663 [Cellvibrio japonicus Ueda107]
 gi|190688464|gb|ACE86142.1| putative membrane protein [Cellvibrio japonicus Ueda107]
          Length = 269

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 68/259 (26%), Positives = 127/259 (49%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I  +++   ++G  +GLFG+GGG VMVPVL+  F          +H+A+ TS+  I 
Sbjct: 3   IYLIVSLLILGAVTGLFAGLFGIGGGGVMVPVLTFLFLRQQFPADHVVHLALATSMATIV 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           PT++ S   H +H  +   ++      + + T   + + +++   FL   F+IF   +  
Sbjct: 63  PTALASLRAHHQHNAVVWPVVLRITPGVLVGTFAGTFLAAYLSVQFLAVFFSIFMAFVAW 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M++  ++   R+ P N      G+  G +S  + +GGG  T   +++   ++  A  TS
Sbjct: 123 QMIRNLQVSPARQLPGNLPLVAVGIAIGAISALVAIGGGTLTVPFLVWCNLALPVAIGTS 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A V   IA    L    +G G+  LP ++LG++   AVL++   S +  PL  +L++ + 
Sbjct: 183 AAVGLPIAASGALGYWINGLGVADLPDYTLGYIYWPAVLVMACASFITAPLGARLAHRLP 242

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              L  GF++++   S   
Sbjct: 243 IPTLKKGFALLLVALSVQM 261



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 20/130 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++      G +S L  +GGG + VP L           ++ + VA+GTS  V  P +   
Sbjct: 142 LVAVGIAIGAISALVAIGGGTLTVPFLVWC--------NLALPVAIGTSAAVGLPIAASG 193

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G I    +        IT  + + +   +    L K FA+ 
Sbjct: 194 ALGYWINGLGVADLPDYTLGYIYWPAVLVMACASFITAPLGARLAHRLPIPTLKKGFALL 253

Query: 134 CLLMGILMLK 143
            + + + ML 
Sbjct: 254 LVALSVQMLL 263


>gi|121605270|ref|YP_982599.1| hypothetical protein Pnap_2371 [Polaromonas naphthalenivorans CJ2]
 gi|120594239|gb|ABM37678.1| protein of unknown function DUF81 [Polaromonas naphthalenivorans
           CJ2]
          Length = 271

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 1/232 (0%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVP ++      G+   + + +A+ TS+  I  TS+ S   H R G +   I+K     +
Sbjct: 33  MVPFITIILAHRGVSADLAVKMAIATSMATIIFTSLSSVRAHHRRGAVRWDIVKRLAPGI 92

Query: 108 PITTVVTSL-MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
            + +++ SL + + +  S+L   F +F       M    +    R+ P    +   G   
Sbjct: 93  VMGSIIGSLGVFALLKGSYLAIFFGLFVSFSATQMFLDKKPKPTRQMPGTGGQLAAGGFI 152

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           GFLSG +G GGG  +   M +    I+ A ATSA +   IA   +L    SG  +  LP 
Sbjct: 153 GFLSGLVGAGGGFISVPFMTWCNIPIHHAVATSAALGFPIAVANVLGYAISGQTVQNLPE 212

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            + G++ + A+L+I   S+L  PL  + ++ I    L   F+ I++  +   
Sbjct: 213 GAFGYIWLPALLVIAICSVLTAPLGARAAHGIPVGKLKRVFASILYLLAAYM 264



 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + A    G LSGL G GGG + VP ++          +I +H A+ TS  +  P +V + 
Sbjct: 146 LAAGGFIGFLSGLVGAGGGFISVPFMTWC--------NIPIHHAVATSAALGFPIAVANV 197

Query: 87  MEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           + +               G I +  L        +T  + +     +    L + FA   
Sbjct: 198 LGYAISGQTVQNLPEGAFGYIWLPALLVIAICSVLTAPLGARAAHGIPVGKLKRVFASIL 257

Query: 135 LLMGILMLKR 144
            L+   ML +
Sbjct: 258 YLLAAYMLYK 267


>gi|325204318|gb|ADY99771.1| putative membrane protein [Neisseria meningitidis M01-240355]
          Length = 268

 Score =  209 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKRAVDWKTVFAMMPGMIFGVFTGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   R    R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGRQTASRPLPGLPGLTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLINGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKKSFGIMLLLIA 260



 Score = 43.5 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G   GF++G  GVGGG     ++L+         +  + + A  TS  V    A
Sbjct: 8   LILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   V  ++P  I         +  I    L I F
Sbjct: 68  FSSMLG------------QHKKRAVDWKTVFAMMPGMIFGVFTGALSAKYIPAFGLQIFF 115

Query: 268 SMIMFTTSFV 277
            + +   +F 
Sbjct: 116 ILFLTAVAFK 125



 Score = 38.1 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 45/131 (34%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L G +S   G+GGG + VP L               H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGAMSSWVGIGGGSLSVPFLIHC--------GFPAHKAIGTSSGLAWPIALSG 195

Query: 86  FMEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G + +  +            +       +  + L K+F I 
Sbjct: 196 AISYLINGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|319941709|ref|ZP_08016031.1| hypothetical protein HMPREF9464_01250 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804642|gb|EFW01509.1| hypothetical protein HMPREF9464_01250 [Sutterella wadsworthensis
           3_1_45B]
          Length = 271

 Score =  209 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 2/231 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+      GI     +HVA+ TS+G I  TS+ S   H + G +   ++      + +
Sbjct: 33  PFLTLLLGYAGIPIEHIVHVAIATSMGTILFTSLSSVRAHAKRGAVLWNVVFSMAPGILV 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
             VV + +   +   ++   FA+F       M    +    R  P     +  G   G +
Sbjct: 93  GAVVGAQVSGALPTFWVALIFAVFVYTSAAKMFLNAKPTPSRHLPGPAGMFGAGTAIGVI 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP--PW 227
           S  +G GGG  +   M +    ++ A  TSA     IAF   +  I SGW L GLP  P+
Sbjct: 153 SALVGAGGGFISVPFMTWCNVKMHNAVGTSAAFGFPIAFAGTIGYIISGWHLTGLPGWPY 212

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++G++++ A++ +   SI   P   K+++ I  K L   F+ ++F  +   
Sbjct: 213 TIGYIHLPALVCVAATSIFFAPFGAKVAHSIDTKPLKRIFASVLFLLATYM 263



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 22/133 (16%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +  A    G +S L G GGG + VP ++          ++ MH A+GTS     P +   
Sbjct: 142 MFGAGTAIGVISALVGAGGGFISVPFMTWC--------NVKMHNAVGTSAAFGFPIAFAG 193

Query: 86  FMEH--------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
            + +                 G I++  L              + +   +D   L + FA
Sbjct: 194 TIGYIISGWHLTGLPGWPYTIGYIHLPALVCVAATSIFFAPFGAKVAHSIDTKPLKRIFA 253

Query: 132 IFCLLMGILMLKR 144
               L+   ML +
Sbjct: 254 SVLFLLATYMLYK 266


>gi|262190227|ref|ZP_06048502.1| hypothetical protein VIH_000597 [Vibrio cholerae CT 5369-93]
 gi|262033896|gb|EEY52361.1| hypothetical protein VIH_000597 [Vibrio cholerae CT 5369-93]
          Length = 264

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 103/229 (44%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       GI   I M +A+ TSL  I  TS  S + H   G +++ ++K  +  + +
Sbjct: 33  PALLFLLPYAGISTEIVMQLALATSLATIILTSGSSALNHLMLGNVDVFVVKWLMPGVVV 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
              + S++   +   +L K F +  L + + M +  R       P  ++  + G   G +
Sbjct: 93  GGFLGSVVAEWIPSQYLPKVFGVIVLCLSVQMYRSIRALQNHPMPSAWITTLCGTGIGVI 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S   G+GGG  +   +  +G  + KA  +S+     IA   ++  I  G+ +  LP +SL
Sbjct: 153 SSLAGIGGGSLSVPFLNRHGIEMKKAIGSSSVCGFAIAISGMIGFILHGYQVENLPQYSL 212

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V + A+L I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 213 GYVYLPALLAIATTSMLTTRIGAKLATQMPTARLKRFFAIFLMCVAVTM 261



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 20/133 (15%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  +     G +S L G+GGG + VP L++          I M  A+G+S       ++
Sbjct: 140 WITTLCGTGIGVISSLAGIGGGSLSVPFLNR--------HGIEMKKAIGSSSVCGFAIAI 191

Query: 84  MSFME------------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
              +                 G + +  L        +TT + + + + +  + L + FA
Sbjct: 192 SGMIGFILHGYQVENLPQYSLGYVYLPALLAIATTSMLTTRIGAKLATQMPTARLKRFFA 251

Query: 132 IFCLLMGILMLKR 144
           IF + + + ML +
Sbjct: 252 IFLMCVAVTMLFQ 264


>gi|260219577|emb|CBA26422.1| hypothetical protein Csp_E35100 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 290

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 1/258 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  +      +G ++GL G+GGG+++ P L+      G+   I + +A+ TS+  I  T
Sbjct: 26  LILELATLGLATGFVAGLLGIGGGMLIGPFLTWILTSRGVPADIAVKMAIATSMATIMFT 85

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL-MISHVDKSFLNKAFAIFCLLMGIL 140
           S+ S   H + G +   ++K     + +   + SL + + +  + L   FA+F       
Sbjct: 86  SISSVRAHHQRGAVRWDVVKRLAPGIVLGGALASLGVFALLKGTTLALLFALFIGYSATQ 145

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           M    +    R+ P    ++  G V GFLSG +G GGG  +   M+ +   I  A ATSA
Sbjct: 146 MFLDKKPKPNRQMPGTAGQWAAGSVIGFLSGLVGAGGGFVSVPFMVAHNILIINAVATSA 205

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +   IA       + +G  L GLP WSLG+V +  + +I   S+   PL  + ++ +  
Sbjct: 206 ALGFPIALANTSGYVLAGLTLPGLPAWSLGYVWLPGLAVIAACSVWTAPLGARTAHRLPV 265

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F+ +++  +   
Sbjct: 266 AKLKRVFACVLYLLAAYM 283



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
            A  + G LSGL G GGG V VP +        +  +I +  A+ TS  +  P ++ +  
Sbjct: 166 AAGSVIGFLSGLVGAGGGFVSVPFM--------VAHNILIINAVATSAALGFPIALANTS 217

Query: 88  EHRRHGTIN-----MKILKDWIFVLPI-------TTVVTSLMISHVDKSFLNKAFAIFCL 135
            +   G          +   W+  L +       T  + +     +  + L + FA    
Sbjct: 218 GYVLAGLTLPGLPAWSLGYVWLPGLAVIAACSVWTAPLGARTAHRLPVAKLKRVFACVLY 277

Query: 136 LMGILMLKR 144
           L+   ML +
Sbjct: 278 LLAAYMLWK 286


>gi|293390606|ref|ZP_06634940.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290951140|gb|EFE01259.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 265

 Score =  209 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 74/262 (28%), Positives = 119/262 (45%), Gaps = 2/262 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++ +    ++A  ++G L+GLFG+GGGLV+VP+L     ++G+ DS+ M  A+GTS   I
Sbjct: 1   MLTFFLFCLLAGCIAGFLAGLFGIGGGLVIVPMLVYLLPIVGVPDSLLMPTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S   H + G +    LK +   L I+  V+S  IS +     +K FA   + + 
Sbjct: 61  VITAFSSAQRHHKLGNVVWSTLKYFAPALMISAFVSSQYISKLPHEISSKLFACLVMYLA 120

Query: 139 ILMLKRDRLYCERKFP--DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
             M+   +                I G + G  +   G+GGG F    +      I KA 
Sbjct: 121 AKMVLSIKQKHIDPNKKITPLASIIGGGLIGMAASVAGIGGGGFIVPFLNSRNVDIKKAI 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            TSA    L+    +L  + SGW   G+PP+S+GFV + AVL I   S   + L    + 
Sbjct: 181 GTSAFCGMLMGIAGMLSFMVSGWNAPGMPPYSIGFVYLPAVLGITVTSFFTSKLGANATN 240

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            +    L   F+  +   +   
Sbjct: 241 KLPVPTLKKAFAAFLIVVAINM 262



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+   L G  + + G+GGG  +VP L+          ++ +  A+GTS        +   
Sbjct: 144 IIGGGLIGMAASVAGIGGGGFIVPFLN--------SRNVDIKKAIGTSAFCGMLMGIAGM 195

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G + +  +         T+ + +   + +    L KAFA F 
Sbjct: 196 LSFMVSGWNAPGMPPYSIGFVYLPAVLGITVTSFFTSKLGANATNKLPVPTLKKAFAAFL 255

Query: 135 LLMGILMLKR 144
           +++ I ML +
Sbjct: 256 IVVAINMLLK 265


>gi|113868931|ref|YP_727420.1| permease [Ralstonia eutropha H16]
 gi|113527707|emb|CAJ94052.1| predicted permease [Ralstonia eutropha H16]
          Length = 274

 Score =  209 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 1/258 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +  ++     +G  +GL GVGGG++MVP L+  F  +G  D   +H+A+ TS+G I  T
Sbjct: 9   LVPALLALGAFTGFCAGLLGVGGGMMMVPFLTLLFTSLGFADEAIVHMAIATSMGTILFT 68

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMGIL 140
           S+ S   H + G +   I+      + +  ++    + + +  S+L+ AFA F     + 
Sbjct: 69  SLSSVRAHHQRGAVRWPIVLALAPGIVLGGMIGGGKVFAALKTSWLSLAFAAFVGFSALQ 128

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           ML+  R    R+ P        G V GFLS  +G GG   +   M +    I+ A ATSA
Sbjct: 129 MLRNRRPKPGRQLPGFAGMAGAGGVIGFLSSLVGAGGAFVSVPFMTWCNVPIHNAVATSA 188

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +   IA  ++   ++SGW   GLP  SLG++ + A+L+I   S++  PL  + ++ +  
Sbjct: 189 ALGFPIAAASVAGYVWSGWQTPGLPAGSLGYLYLPALLVIAAASVMTAPLGARTAHRMDV 248

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F+ ++   +   
Sbjct: 249 SQLRKVFAALLLCLASYM 266



 Score = 43.1 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 20/122 (16%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR---- 90
            LS L G GG  V VP ++          ++ +H A+ TS  +  P +  S   +     
Sbjct: 156 FLSSLVGAGGAFVSVPFMTWC--------NVPIHNAVATSAALGFPIAAASVAGYVWSGW 207

Query: 91  --------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                     G + +  L        +T  + +     +D S L K FA   L +   ML
Sbjct: 208 QTPGLPAGSLGYLYLPALLVIAAASVMTAPLGARTAHRMDVSQLRKVFAALLLCLASYML 267

Query: 143 KR 144
            +
Sbjct: 268 WK 269


>gi|315633681|ref|ZP_07888971.1| permease [Aggregatibacter segnis ATCC 33393]
 gi|315477723|gb|EFU68465.1| permease [Aggregatibacter segnis ATCC 33393]
          Length = 265

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 2/262 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++ +    ++A  ++G L+GLFG+GGG+V+VP++     ++G+ DS+ M  A+GTS   I
Sbjct: 1   MLTFFLFCLLAGCVAGFLAGLFGIGGGMVIVPMMVYLLPIVGVPDSLLMSTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S   H + G +    LK +   L I+  ++   IS +     +K FA   + + 
Sbjct: 61  VVTAFSSAQRHHKLGNVVWSTLKYFAPALMISAFISGQYISKLPHDVSSKLFACLVVYLA 120

Query: 139 ILMLKRDRLYCERKFP--DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
             M+   +                I G + G  S   G+GGG F    +      I KA 
Sbjct: 121 AKMILSIKPKNIDPNKKITPLSSIIGGALIGMASSVAGIGGGGFIVPFLNSRNVDIKKAI 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            TSA    L+    +L  + SGW   G+PP+S+GFV   AVL I   S   + L    + 
Sbjct: 181 GTSAFCGMLMGIAGMLSFMVSGWNAQGMPPYSVGFVYFPAVLGITVTSFFTSKLGANATN 240

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            +    L   F+  +   +   
Sbjct: 241 KLPVPTLKKAFAAFLIVVAINM 262



 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+   L G  S + G+GGG  +VP L+          ++ +  A+GTS        +   
Sbjct: 144 IIGGALIGMASSVAGIGGGGFIVPFLN--------SRNVDIKKAIGTSAFCGMLMGIAGM 195

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G +    +         T+ + +   + +    L KAFA F 
Sbjct: 196 LSFMVSGWNAQGMPPYSVGFVYFPAVLGITVTSFFTSKLGANATNKLPVPTLKKAFAAFL 255

Query: 135 LLMGILMLKR 144
           +++ I ML +
Sbjct: 256 IVVAINMLLK 265


>gi|78356292|ref|YP_387741.1| hypothetical protein Dde_1245 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218697|gb|ABB38046.1| membrane protein, putative [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 266

 Score =  208 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 107/232 (46%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VP+L+ AF+L    +    H+A+GTS+  +  TS+ S   H + GTIN          
Sbjct: 29  VIVPMLNIAFELQNFPEQHLQHIALGTSMATMIFTSLSSMRAHHKRGTINYNAFWRLAPG 88

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           +   T + + + S +   FL   F  F   +   ML   +    R+ P     +  G   
Sbjct: 89  IVCGTYLGAWVASLLSTVFLKAFFGFFLYYVAAQMLLNLKPASSRELPGAAGVFAAGGGI 148

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G  S   G+GGG  T   + +   +++ A AT+A +   IA       +++GW + G+P 
Sbjct: 149 GVFSALAGIGGGTLTVPFLSWCNQTMHTAIATAAAIGMPIALTGTAGYVFTGWNVAGIPG 208

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             LG+V + A L I+ +S+L  PL  KL++ +    L   F+ ++F      
Sbjct: 209 PHLGYVYLPAFLGIICMSVLTAPLGAKLAHSLPVDKLRRIFAGLLFIVGSRM 260



 Score = 38.9 bits (90), Expect = 0.90,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 6/113 (5%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC----MHVAM-GTSLGVIAPTSVMSFMEH 89
             S L G+GGG + VP LS   Q M    +      M +A+ GT+  V    +V      
Sbjct: 150 VFSALAGIGGGTLTVPFLSWCNQTMHTAIATAAAIGMPIALTGTAGYVFTGWNVAGIPGP 209

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              G + +      I +  +T  + + +   +    L + FA    ++G  ML
Sbjct: 210 H-LGYVYLPAFLGIICMSVLTAPLGAKLAHSLPVDKLRRIFAGLLFIVGSRML 261


>gi|161870192|ref|YP_001599362.1| hypothetical protein NMCC_1232 [Neisseria meningitidis 053442]
 gi|161595745|gb|ABX73405.1| conserved hypothetical protein [Neisseria meningitidis 053442]
          Length = 268

 Score =  208 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFVAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFAMMPGMIFGVFAGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L        R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGPQTASRPLPKLPGLTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKKSFGIMLLLIA 260



 Score = 43.1 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G   GF++G  GVGGG     ++L+         +  + + A  TS  V    A
Sbjct: 8   LILLAVGSAAGFVAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   V  ++P  I         +  I    L I F
Sbjct: 68  FSSMLG------------QHKKQAVDWKTVFAMMPGMIFGVFAGALSAKYIPAFGLQIFF 115

Query: 268 SMIMFTTSFV 277
            + +   +F 
Sbjct: 116 ILFLTAVAFK 125



 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 46/131 (35%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L G +S   G+GGG + VP L               H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGAMSSWVGIGGGSLSVPFLIHC--------GFPAHKAIGTSSGLAWPIALSG 195

Query: 86  FMEHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +  +G             + +  +            +       +  + L K+F I 
Sbjct: 196 AISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|149192452|ref|ZP_01870646.1| hypothetical protein VSAK1_11133 [Vibrio shilonii AK1]
 gi|148833718|gb|EDL50761.1| hypothetical protein VSAK1_11133 [Vibrio shilonii AK1]
          Length = 263

 Score =  208 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 72/249 (28%), Positives = 122/249 (48%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             + GT+SGL G+GGGL++VP L+      GI   + MH+A+ TSL  I  TS  S + H
Sbjct: 13  GAVVGTMSGLLGIGGGLIVVPALAFILPKFGIASDMVMHIALATSLASIIITSGSSAVNH 72

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
            + G +++ ++K  +  + I     S +   +   +L K FA+  LL+ I M    +   
Sbjct: 73  LKLGNVDLFVIKWLMPGVVIGGFAGSNVAEWIPSHYLPKVFAVIVLLLAIQMFLSIKSQV 132

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
            R  P  ++    G   G +S   G+GGG  +   +  +G  + KA  +S+    +IA  
Sbjct: 133 TRNLPSPFITTCCGAGIGMVSSLAGIGGGSMSVPFLSKHGVEMRKAVGSSSVCGCVIAIA 192

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            ++  I  G  + GLP +S+G+V + A+L I   S+L T    KL+  +    L   F++
Sbjct: 193 GMIGFIMHGAKVQGLPEYSIGYVYLPALLSIAATSMLTTKFGAKLATTMPTPKLKKIFAV 252

Query: 270 IMFTTSFVF 278
            +   +F  
Sbjct: 253 FLLFVAFSM 261



 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 20/126 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G +S L G+GGG + VP LS           + M  A+G+S       ++   +  
Sbjct: 146 GAGIGMVSSLAGIGGGSMSVPFLS--------KHGVEMRKAVGSSSVCGCVIAIAGMIGF 197

Query: 90  RRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
             HG             + +  L        +TT   + + + +    L K FA+F L +
Sbjct: 198 IMHGAKVQGLPEYSIGYVYLPALLSIAATSMLTTKFGAKLATTMPTPKLKKIFAVFLLFV 257

Query: 138 GILMLK 143
              M+ 
Sbjct: 258 AFSMMF 263


>gi|227822290|ref|YP_002826261.1| protein of unknown function DUF81 [Sinorhizobium fredii NGR234]
 gi|227341290|gb|ACP25508.1| protein of unknown function DUF81 [Sinorhizobium fredii NGR234]
          Length = 273

 Score =  208 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 100/262 (38%), Positives = 161/262 (61%), Gaps = 1/262 (0%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++ +   +  A  +SG L+GLFGVGGG ++VPV  + F L+G+DD++ MH+++GTS  +
Sbjct: 6   ELMMFALALAAAGVVSGVLAGLFGVGGGAILVPVFFQVFGLLGVDDAVRMHLSVGTSTAI 65

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I PTSV SF+ H R G ++  +L++WI  +P+  ++ +++ ++V    L   FA+  L +
Sbjct: 66  IVPTSVRSFLLHYRRGVVDTALLRNWILAIPLGAILATVIAAYVSSETLRLIFAMIALAV 125

Query: 138 GILMLK-RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
            + M+  R      R  P N + ++ G+V G LSG +GVGGG+  N  M  Y   I++A 
Sbjct: 126 ALRMIFNRATWRLGRDLPKNPITWLVGVVIGVLSGLMGVGGGVLNNTFMTLYNRPIHEAI 185

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           ATS+GV  LI+ P L   I++G G  GLPP S GFVN  AV +I+P+S+L+ PL  +L++
Sbjct: 186 ATSSGVGVLISIPGLFGYIWAGSGEPGLPPLSTGFVNWIAVALIIPVSLLVAPLGVRLAH 245

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            + ++ L  GF + M   +  F
Sbjct: 246 AMDRRQLEAGFGIFMILIALRF 267


>gi|15677185|ref|NP_274338.1| hypothetical protein NMB1319 [Neisseria meningitidis MC58]
 gi|7226561|gb|AAF41694.1| conserved hypothetical protein [Neisseria meningitidis MC58]
          Length = 257

 Score =  208 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 1/250 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFTMMPGMIFGVFTGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L  D     R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTDPQTASRPLPGLPGLTAVSTLFGTMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSM 269
              L    ++
Sbjct: 245 SAKLKKSSAL 254



 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G   GF++G  GVGGG     ++L+         +  + + A  TS  V    A
Sbjct: 8   LILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   V  ++P  I         +  I    L I F
Sbjct: 68  FSSMLG------------QHKKQAVDWKTVFTMMPGMIFGVFTGALSAKYIPAFGLQIFF 115

Query: 268 SMIMFTTSFV 277
            + +   +F 
Sbjct: 116 ILFLTAVAFK 125


>gi|325144541|gb|EGC66840.1| putative membrane protein [Neisseria meningitidis M01-240013]
          Length = 268

 Score =  208 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  ++ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAIMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F  ++  
Sbjct: 65  FTAFSSMLGQHKKRAVDWKTVFAMMPGMIFGVFAGALSAKYIPAFGLQIFFILFLTVVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L        R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGPQTASRPLPKLPGLTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKKSFGIMLLLIA 260



 Score = 43.9 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G   GF++G  GVGGG     ++L+         +  + + A  TS  +    A
Sbjct: 8   LILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAIMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   V  ++P  I         +  I    L I F
Sbjct: 68  FSSMLG------------QHKKRAVDWKTVFAMMPGMIFGVFAGALSAKYIPAFGLQIFF 115

Query: 268 SMIMFTTSFV 277
            + +   +F 
Sbjct: 116 ILFLTVVAFK 125



 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 46/131 (35%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L G +S   G+GGG + VP L               H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGAMSSWVGIGGGSLSVPFLIHC--------GFPAHKAIGTSSGLAWPIALSG 195

Query: 86  FMEHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +  +G             + +  +            +       +  + L K+F I 
Sbjct: 196 AISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|50119044|ref|YP_048211.1| hypothetical protein ECA0083 [Pectobacterium atrosepticum SCRI1043]
 gi|49609570|emb|CAG73003.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
          Length = 247

 Score =  208 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 67/236 (28%), Positives = 121/236 (51%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +++I   +    + G ++GL G+GGG +MVPVL+  F   G+D++  +H+A+GTS+  I 
Sbjct: 1   MEWIAAYLALGAVVGFMAGLLGIGGGGIMVPVLTALFAAQGVDNTHLVHLALGTSMAAIV 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T++ S   H +H  +   ++      + I T   + + + +    L   F+ F   + +
Sbjct: 61  VTAISSLRTHHQHQAVLWPVVVRITPAILIGTFAATWLATMLPTRTLAIFFSCFMAYVSL 120

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M+   +   +R+ P        G+V G +S  + +GGG  T   + +    I +A  TS
Sbjct: 121 QMVLNIKPKPQRQLPGTAGVSFAGLVIGSISALVAIGGGSLTVPFLTWCNVRIQQAIGTS 180

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           A V   IA    L  + +GW  NGLP +S+G+V++ AVL+I  +S    P+  +L+
Sbjct: 181 AAVGLPIALSGALGYMINGWSANGLPDYSVGYVSLPAVLLISAVSFFTAPVGARLA 236


>gi|260775161|ref|ZP_05884059.1| hypothetical protein VIC_000532 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608862|gb|EEX35024.1| hypothetical protein VIC_000532 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 263

 Score =  208 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 107/229 (46%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++VP L     + GID +I M +A+ TSL  I  TS  S   H + G ++M ++K  +  
Sbjct: 30  IVVPALLFLLPMAGIDPAISMQIALATSLASIIVTSGSSAFNHFKLGNVDMYVVKWLMPG 89

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + +   + + +   +   +L K F +  L + + ML   +   ++  P N      G   
Sbjct: 90  VVVGGFLGANVAEWIPSQYLPKVFGVIVLCLAVQMLFSIKRKSQKIMPGNSATVAIGTGI 149

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S   G+GGG  +   +  +G  + KA  +S+     IA   ++  I  G+    LP 
Sbjct: 150 GMVSSLAGIGGGSLSVPFLNRHGIEMRKAVGSSSVCGCFIAISGMIGFILHGYQAQSLPA 209

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +SLG+V + A++ I   S+L T +  KL+  +    L   F++ +   +
Sbjct: 210 YSLGYVYVPALIAIASTSMLTTRIGAKLATSLPTATLKKIFAVFLVFVA 258



 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 20/129 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +      G +S L G+GGG + VP L++          I M  A+G+S       ++   
Sbjct: 143 VAIGTGIGMVSSLAGIGGGSLSVPFLNR--------HGIEMRKAVGSSSVCGCFIAISGM 194

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G + +  L        +TT + + + + +  + L K FA+F 
Sbjct: 195 IGFILHGYQAQSLPAYSLGYVYVPALIAIASTSMLTTRIGAKLATSLPTATLKKIFAVFL 254

Query: 135 LLMGILMLK 143
           + +   ML 
Sbjct: 255 VFVAGTMLL 263


>gi|256823626|ref|YP_003147589.1| hypothetical protein Kkor_2412 [Kangiella koreensis DSM 16069]
 gi|256797165|gb|ACV27821.1| protein of unknown function DUF81 [Kangiella koreensis DSM 16069]
          Length = 268

 Score =  208 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 64/241 (26%), Positives = 121/241 (50%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           +GLFG+GGGLV+VP +      + + D   MH+A+ TS+  I   +V S + H R G+++
Sbjct: 22  AGLFGIGGGLVIVPAMVWLLPQIDVPDQHIMHMALATSMATICFIAVSSALAHYRRGSVS 81

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN 156
           +++LK  +  + + +++ S +   ++  +L   F  F +LMG+ M+       + +    
Sbjct: 82  IRLLKLLVPGIMVGSLLGSYLAKLMNTEWLAWIFGFFSILMGLRMMIDKLPVAKGERLHW 141

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
                  +V G LS  +G+GGG      +LF+   +  +  T+A     +A  A +  I 
Sbjct: 142 QQATPSAVVMGALSSLVGIGGGSLVVPYLLFHKEKLVLSIGTAAACGLPLAVMAAVGYIL 201

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            GW + GLP + LG+V + A++ I   SI+  P    L++ +  K +   F++++     
Sbjct: 202 LGWNVQGLPDYHLGYVYLPAMIAIAVGSIVTAPFGAYLAHRLPTKVIKRFFALLLIIVGI 261

Query: 277 V 277
            
Sbjct: 262 K 262



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 51/118 (43%), Gaps = 4/118 (3%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ + G LS L G+GGG ++VP L          +G   +  + +A+  ++G I     +
Sbjct: 147 SAVVMGALSSLVGIGGGSLVVPYLLFHKEKLVLSIGTAAACGLPLAVMAAVGYILLGWNV 206

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +     G + +  +        +T    + +   +    + + FA+  +++GI ++
Sbjct: 207 QGLPDYHLGYVYLPAMIAIAVGSIVTAPFGAYLAHRLPTKVIKRFFALLLIIVGIKII 264


>gi|325134441|gb|EGC57086.1| putative membrane protein [Neisseria meningitidis M13399]
          Length = 268

 Score =  208 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKRAVDWKTVFAMMPGMIFGVFTGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L        R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGPQTASRPLPGLPGLTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLINGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKKSFGIMLLLIA 260



 Score = 43.5 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G   GF++G  GVGGG     ++L+         +  + + A  TS  V    A
Sbjct: 8   LILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   V  ++P  I         +  I    L I F
Sbjct: 68  FSSMLG------------QHKKRAVDWKTVFAMMPGMIFGVFTGALSAKYIPAFGLQIFF 115

Query: 268 SMIMFTTSFV 277
            + +   +F 
Sbjct: 116 ILFLTAVAFK 125



 Score = 37.7 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 45/131 (34%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L G +S   G+GGG + VP L               H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGAMSSWVGIGGGSLSVPFLIHC--------GFPAHKAIGTSSGLAWPIALSG 195

Query: 86  FMEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G + +  +            +       +  + L K+F I 
Sbjct: 196 AISYLINGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|296314494|ref|ZP_06864435.1| putative membrane protein [Neisseria polysaccharea ATCC 43768]
 gi|296838796|gb|EFH22734.1| putative membrane protein [Neisseria polysaccharea ATCC 43768]
          Length = 268

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFVAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFAMMPGMIFGVFAGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L        R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGPQTASRPLPKLPGLTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +    PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATSAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKKSFGIMLLLIA 260



 Score = 43.5 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G   GF++G  GVGGG     ++L+         +  + + A  TS  V    A
Sbjct: 8   LILLAVGSAAGFVAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   V  ++P  I         +  I    L I F
Sbjct: 68  FSSMLG------------QHKKQAVDWKTVFAMMPGMIFGVFAGALSAKYIPAFGLQIFF 115

Query: 268 SMIMFTTSFV 277
            + +   +F 
Sbjct: 116 ILFLTAVAFK 125



 Score = 38.1 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 46/131 (35%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L G +S   G+GGG + VP L               H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGAMSSWVGIGGGSLSVPFLIHC--------GFPAHKAIGTSSGLAWPIALSG 195

Query: 86  FMEHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +  +G             + +  +            +       +  + L K+F I 
Sbjct: 196 AISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATSAFAPLGVKTAHKLSSAKLKKSFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|325128385|gb|EGC51268.1| putative membrane protein [Neisseria meningitidis N1568]
          Length = 268

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTVFAMMPGMIFGVFAGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L        R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGPQTASRPLPGLPGLTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKKSFGIMLLLIA 260



 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G   GF++G  GVGGG     ++L+         +  + + A  TS  V    A
Sbjct: 8   LILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   V  ++P  I         +  I    L I F
Sbjct: 68  FSSMLG------------QHKKQAVDWKTVFAMMPGMIFGVFAGALSAKYIPAFGLQIFF 115

Query: 268 SMIMFTTSFV 277
            + +   +F 
Sbjct: 116 ILFLTAVAFK 125



 Score = 38.1 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 46/131 (35%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L G +S   G+GGG + VP L               H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGAMSSWVGIGGGSLSVPFLIHC--------GFPAHKAIGTSSGLAWPIALSG 195

Query: 86  FMEHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +  +G             + +  +            +       +  + L K+F I 
Sbjct: 196 AISYLLNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|59801016|ref|YP_207728.1| hypothetical protein NGO0585 [Neisseria gonorrhoeae FA 1090]
 gi|240113157|ref|ZP_04727647.1| hypothetical protein NgonM_06221 [Neisseria gonorrhoeae MS11]
 gi|254493950|ref|ZP_05107121.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268599237|ref|ZP_06133404.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|293398879|ref|ZP_06643044.1| hypothetical protein NGNG_00062 [Neisseria gonorrhoeae F62]
 gi|59717911|gb|AAW89316.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|226512990|gb|EEH62335.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268583368|gb|EEZ48044.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|291610293|gb|EFF39403.1| hypothetical protein NGNG_00062 [Neisseria gonorrhoeae F62]
          Length = 268

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +   ++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQAVDWKTIFAMMPGMIFGVFAGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   R    R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGRQTASRPLPGLPGLTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLVNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKESFGIMLLLIA 260



 Score = 42.8 bits (100), Expect = 0.063,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G   GF++G  GVGGG     ++L+         +  + + A  TS  V    A
Sbjct: 8   LILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   +  ++P  I         +  I    L I F
Sbjct: 68  FSSMLG------------QHKKQAVDWKTIFAMMPGMIFGVFAGALSAKYIPAFGLQIFF 115

Query: 268 SMIMFTTSFV 277
            + +   +F 
Sbjct: 116 ILFLTAVAFK 125



 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 45/131 (34%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L G +S   G+GGG + VP L               H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGAMSSWVGIGGGSLSVPFLIHC--------GFPAHKAIGTSSGLAWPIALSG 195

Query: 86  FMEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G + +  +            +       +  + L ++F I 
Sbjct: 196 AISYLVNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLSSAKLKESFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|194098894|ref|YP_002001959.1| hypothetical protein NGK_1334 [Neisseria gonorrhoeae NCCP11945]
 gi|239999178|ref|ZP_04719102.1| hypothetical protein Ngon3_06825 [Neisseria gonorrhoeae 35/02]
 gi|240013914|ref|ZP_04720827.1| hypothetical protein NgonD_04568 [Neisseria gonorrhoeae DGI18]
 gi|240016356|ref|ZP_04722896.1| hypothetical protein NgonFA_04164 [Neisseria gonorrhoeae FA6140]
 gi|240080475|ref|ZP_04725018.1| hypothetical protein NgonF_04062 [Neisseria gonorrhoeae FA19]
 gi|240115913|ref|ZP_04729975.1| hypothetical protein NgonPID1_06659 [Neisseria gonorrhoeae PID18]
 gi|240121483|ref|ZP_04734445.1| hypothetical protein NgonPI_06898 [Neisseria gonorrhoeae PID24-1]
 gi|240123759|ref|ZP_04736715.1| hypothetical protein NgonP_07449 [Neisseria gonorrhoeae PID332]
 gi|240125950|ref|ZP_04738836.1| hypothetical protein NgonSK_06987 [Neisseria gonorrhoeae SK-92-679]
 gi|240128462|ref|ZP_04741123.1| hypothetical protein NgonS_07501 [Neisseria gonorrhoeae SK-93-1035]
 gi|260440272|ref|ZP_05794088.1| hypothetical protein NgonDG_04126 [Neisseria gonorrhoeae DGI2]
 gi|268595009|ref|ZP_06129176.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268596611|ref|ZP_06130778.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268601584|ref|ZP_06135751.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268682386|ref|ZP_06149248.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268684544|ref|ZP_06151406.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268686854|ref|ZP_06153716.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291043567|ref|ZP_06569283.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|193934184|gb|ACF30008.1| Conserved hypothetical integral membrane protein [Neisseria
           gonorrhoeae NCCP11945]
 gi|268548398|gb|EEZ43816.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268550399|gb|EEZ45418.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268585715|gb|EEZ50391.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268622670|gb|EEZ55070.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268624828|gb|EEZ57228.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268627138|gb|EEZ59538.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291012030|gb|EFE04019.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|317164465|gb|ADV08006.1| hypothetical protein NGTW08_1038 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 268

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +  T++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQTVDWKTIFAMMPGMIFGVFAGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   R    R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGRQTASRPLPGLPGLTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLVNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKESFGIMLLLIA 260



 Score = 42.0 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G   GF++G  GVGGG     ++L+         +  + + A  TS  V    A
Sbjct: 8   LILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   +  ++P  I         +  I    L I F
Sbjct: 68  FSSMLG------------QHKKQTVDWKTIFAMMPGMIFGVFAGALSAKYIPAFGLQIFF 115

Query: 268 SMIMFTTSFV 277
            + +   +F 
Sbjct: 116 ILFLTAVAFK 125



 Score = 37.4 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 45/131 (34%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L G +S   G+GGG + VP L               H A+GTS G+  P ++  
Sbjct: 144 LTAVSTLFGAMSSWVGIGGGSLSVPFLIHC--------GFPAHKAIGTSSGLAWPIALSG 195

Query: 86  FMEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G + +  +            +       +  + L ++F I 
Sbjct: 196 AISYLVNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLSSAKLKESFGIM 255

Query: 134 CLLMGILMLKR 144
            LL+   ML  
Sbjct: 256 LLLIAGKMLYN 266


>gi|332284782|ref|YP_004416693.1| hypothetical protein PT7_1529 [Pusillimonas sp. T7-7]
 gi|330428735|gb|AEC20069.1| hypothetical protein PT7_1529 [Pusillimonas sp. T7-7]
          Length = 269

 Score =  208 bits (529), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 1/231 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L+      G+DD + + +A+ TS+ VI  TS+ S   H + G +   I++     + 
Sbjct: 32  VPFLTYLISAQGVDDELAVKMAIATSMAVIIFTSISSVRAHHKRGAVRWDIVRKLAPGIV 91

Query: 109 ITTVVTSL-MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
           I +++ S+ + S +  ++L   F IF       M    +    R+ P    + + G   G
Sbjct: 92  IGSMIGSVGVFSILKGAYLAIFFGIFVAFSATQMFLGKKPPPARQMPGTGGQLLAGGFIG 151

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           FLSG +G GGG  +   M +   +I+ A ATSA +   IA   +   I SG  + GLPP 
Sbjct: 152 FLSGLVGAGGGFISVPFMTWCNVAIHTAVATSAALGFPIAVANVAGYIASGMSVTGLPPA 211

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           S G++ + A+ +I   S+   PL  + ++ +    L   F+++++  +   
Sbjct: 212 SFGYIYLPALAVIAAASVCTAPLGARAAHSLPVNRLKRVFALMLYVLAIYM 262



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A    G LSGL G GGG + VP ++          ++ +H A+ TS  +  P +V + 
Sbjct: 144 LLAGGFIGFLSGLVGAGGGFISVPFMTWC--------NVAIHTAVATSAALGFPIAVANV 195

Query: 87  MEHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
             +   G             I +  L         T  + +     +  + L + FA+  
Sbjct: 196 AGYIASGMSVTGLPPASFGYIYLPALAVIAAASVCTAPLGARAAHSLPVNRLKRVFALML 255

Query: 135 LLMGILMLKR 144
            ++ I M  +
Sbjct: 256 YVLAIYMFLK 265


>gi|114800124|ref|YP_761412.1| hypothetical protein HNE_2732 [Hyphomonas neptunium ATCC 15444]
 gi|114740298|gb|ABI78423.1| putative membrane protein [Hyphomonas neptunium ATCC 15444]
          Length = 264

 Score =  208 bits (529), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 78/258 (30%), Positives = 127/258 (49%), Gaps = 2/258 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +  + +A   +G  +GLFG+GGG+V+VPVL      +G      MHVA+ TSL  I  T
Sbjct: 1   MLIALAIAGLFAGLAAGLFGIGGGVVIVPVLFFLLDSLGYT-ETAMHVAVSTSLATIILT 59

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           SV S M H + G ++ +I++ W   + + +V+  L+  +  K  +   F    +L     
Sbjct: 60  SVRSVMAHNKRGAVDWRIIRTWSPWIVLGSVIGILLAGYFSKQVMLGIFGTVLILFAAQF 119

Query: 142 -LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
              R       + P   ++   G   G LS  +G+GGG     LM   G  +++A AT+A
Sbjct: 120 YFGRPGWKLAPEMPVGILRAAIGAFNGALSSIMGIGGGTLGVTLMTLCGMPMHRAVATAA 179

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
           G    I FP  +  +  GWG +GLPP+S GFVN+ A  +I   ++L+ P+   L++ +  
Sbjct: 180 GWGVAIGFPGAIAAMIVGWGRDGLPPFSAGFVNLPAFALISVFTVLMAPVGAALAHKLDA 239

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F +++   S   
Sbjct: 240 DRLRRLFGILLGLVSLRM 257



 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 12/127 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L       +G LS + G+GGG + V        L G+     +  A G  + +  P ++
Sbjct: 136 ILRAAIGAFNGALSSIMGIGGGTLGV----TLMTLCGMPMHRAVATAAGWGVAIGFPGAI 191

Query: 84  MSFMEHRRH--------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            + +             G +N+           +   V + +   +D   L + F I   
Sbjct: 192 AAMIVGWGRDGLPPFSAGFVNLPAFALISVFTVLMAPVGAALAHKLDADRLRRLFGILLG 251

Query: 136 LMGILML 142
           L+ + ML
Sbjct: 252 LVSLRML 258


>gi|121611675|ref|YP_999482.1| hypothetical protein Veis_4771 [Verminephrobacter eiseniae EF01-2]
 gi|121556315|gb|ABM60464.1| protein of unknown function DUF81 [Verminephrobacter eiseniae
           EF01-2]
          Length = 241

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 1/234 (0%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++MVP ++       +   + + +A+ TS+  I  TS+ S   H R G +   I++    
Sbjct: 1   MLMVPFMTYILGTQQVAPDLAVKMAIATSMATIVFTSISSVRAHHRRGAVRWDIVRRLAP 60

Query: 106 VLPITTVVTSL-MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM 164
            + +  +  SL + + +  +FL   FA+F       M    +    R  P    +   G 
Sbjct: 61  GIVLGGLGASLGVFALLKGAFLAIFFALFVSFSATQMFLDKKPAPTRHLPGAAGQVAAGG 120

Query: 165 VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
           V GFLSG +G GGG  +   M +    I+ A A+SA +   IA   +L  + SG  ++GL
Sbjct: 121 VIGFLSGLVGAGGGFVSVPFMTWCNVPIHNAVASSAALGFPIALANVLGYVISGQHISGL 180

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           P  SLG++ + A+ +I   S+   PL  K ++ +  + L   F+ ++F  +   
Sbjct: 181 PAASLGYIWLPALAVIAACSVFTAPLGAKAAHKLPVRQLKRVFASLLFALAAYM 234



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 20/123 (16%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH---- 89
           G LSGL G GGG V VP ++          ++ +H A+ +S  +  P ++ + + +    
Sbjct: 123 GFLSGLVGAGGGFVSVPFMTWC--------NVPIHNAVASSAALGFPIALANVLGYVISG 174

Query: 90  --------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                      G I +  L         T  + +     +    L + FA     +   M
Sbjct: 175 QHISGLPAASLGYIWLPALAVIAACSVFTAPLGAKAAHKLPVRQLKRVFASLLFALAAYM 234

Query: 142 LKR 144
             +
Sbjct: 235 FYK 237


>gi|254449162|ref|ZP_05062612.1| membrane protein [gamma proteobacterium HTCC5015]
 gi|198261208|gb|EDY85503.1| membrane protein [gamma proteobacterium HTCC5015]
          Length = 269

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 68/258 (26%), Positives = 124/258 (48%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I   ++    SGT++GL GVGGGL++VP++       G+     + +A+ TSL +I P
Sbjct: 4   STIFAFLLTGVFSGTVAGLLGVGGGLIIVPIIVAILHAQGLAVDYAIKIAVATSLAIIIP 63

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS+ S   H R G +   +    +  +   TV+   ++  + + +L   F++ C  +G+ 
Sbjct: 64  TSLSSARAHHRSGALRWPLFWQLLPGIIAGTVLGGFIVDAMPELWLRLFFSVGCWAVGLK 123

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           ML   +    R+ P +    + G + G +S  LG+GGG  T   + +   ++ +A ATS+
Sbjct: 124 MLLGAQPKPHRQLPASLGMSVAGSIIGAISAMLGIGGGSLTVPFLHWCNVNMREAVATSS 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA    +    +G  L  LP +SLG++ + A L I   +IL+ P+  KL++ +  
Sbjct: 184 ACGLPIAVAGAITLALTGLDLEALPQYSLGYIYLPAFLGIATTAILMAPVGAKLAHRLPI 243

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L    ++ +       
Sbjct: 244 PVLKKCLALFLLVAGTRM 261



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + VA  + G +S + G+GGG + VP L           ++ M  A+ TS     P +V  
Sbjct: 142 MSVAGSIIGAISAMLGIGGGSLTVPFLHWC--------NVNMREAVATSSACGLPIAVAG 193

Query: 86  FME------------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +                 G I +           +   V + +   +    L K  A+F
Sbjct: 194 AITLALTGLDLEALPQYSLGYIYLPAFLGIATTAILMAPVGAKLAHRLPIPVLKKCLALF 253

Query: 134 CLLMGILMLKR 144
            L+ G  ML +
Sbjct: 254 LLVAGTRMLGK 264


>gi|89901404|ref|YP_523875.1| hypothetical protein Rfer_2628 [Rhodoferax ferrireducens T118]
 gi|89346141|gb|ABD70344.1| protein of unknown function DUF81 [Rhodoferax ferrireducens T118]
          Length = 272

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 1/231 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP ++      G+  ++ + +A+ TS+  I  TSV S   H + G +   +++     + 
Sbjct: 34  VPFITIILSGRGVSPNLAVKMAIATSMATILFTSVSSVRAHHKRGAVRWDLVRGLAPGIL 93

Query: 109 ITTVVTSL-MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
           +   V SL + + +  S+L   FA F       M    +    R+ P        G V G
Sbjct: 94  LGGAVASLGVFALLKGSWLALFFAAFVSFSATQMFLDKKPAPTRQVPGTAGLIGAGGVIG 153

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           FLSG +G GGG  +   M +   +I+ A ATSA +   IA   ++  +  G  +  LPP+
Sbjct: 154 FLSGLVGAGGGFVSVPFMTWCNVAIHNAVATSAALGFPIALANVVGYVIGGQDVQNLPPY 213

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           S G++ + A+ +I   S+L  PL  + ++ +  K L   F+ I++  +   
Sbjct: 214 SFGYIWLPAMGVIASCSVLTAPLGARAAHTLPVKQLKRVFASILYLLAAYM 264



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 51/131 (38%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I A  + G LSGL G GGG V VP ++          ++ +H A+ TS  +  P ++ +
Sbjct: 145 LIGAGGVIGFLSGLVGAGGGFVSVPFMTWC--------NVAIHNAVATSAALGFPIALAN 196

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G I +  +        +T  + +     +    L + FA  
Sbjct: 197 VVGYVIGGQDVQNLPPYSFGYIWLPAMGVIASCSVLTAPLGARAAHTLPVKQLKRVFASI 256

Query: 134 CLLMGILMLKR 144
             L+   ML R
Sbjct: 257 LYLLAAYMLYR 267


>gi|240118211|ref|ZP_04732273.1| hypothetical protein NgonPID_07086 [Neisseria gonorrhoeae PID1]
 gi|268603923|ref|ZP_06138090.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268588054|gb|EEZ52730.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
          Length = 268

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 1/256 (0%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIA 79
           D I +++     +G ++GLFGVGGG ++VPV+     L G+       H+A+GTS  V+ 
Sbjct: 5   DIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S +   +  T++ K +   +  +       +L   ++    L   F +F   +  
Sbjct: 65  FTAFSSMLGQHKKQTVDWKTIFAMMPGMIFGVFAGALSAKYIPAFGLQIFFILFLTAVAF 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L   R    R  P          + G +S  +G+GGG  +   ++  G   +KA  TS
Sbjct: 125 KTLHTGRQTASRPLPGLPALTAVSTLFGAMSSWVGIGGGSLSVPFLIHCGFPAHKAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +G++  IA    +  + +G  + GLP  SLGF+ + AV ++   +I   PL  K ++ + 
Sbjct: 185 SGLAWPIALSGAISYLVNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLS 244

Query: 260 KKYLTIGFSMIMFTTS 275
              L   F +++   +
Sbjct: 245 SAKLKESFGIMLLLIA 260



 Score = 42.0 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---------YGASIYKATATSAGVSALIA 207
            +    G   GF++G  GVGGG     ++L+         +  + + A  TS  V    A
Sbjct: 8   LILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQGLAQHPYAQHLAVGTSFAVMVFTA 67

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F ++L                   V+   +  ++P  I         +  I    L I F
Sbjct: 68  FSSMLG------------QHKKQTVDWKTIFAMMPGMIFGVFAGALSAKYIPAFGLQIFF 115

Query: 268 SMIMFTTSFV 277
            + +   +F 
Sbjct: 116 ILFLTAVAFK 125



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 46/134 (34%), Gaps = 20/134 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +   S L G +S   G+GGG + VP L               H A+GTS G+  P +
Sbjct: 141 LPALTAVSTLFGAMSSWVGIGGGSLSVPFLIHC--------GFPAHKAIGTSSGLAWPIA 192

Query: 83  VMSFMEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +   + +               G + +  +            +       +  + L ++F
Sbjct: 193 LSGAISYLVNGLNIAGLPEGSLGFLYLPAVAVLSAATIAFAPLGVKTAHKLSSAKLKESF 252

Query: 131 AIFCLLMGILMLKR 144
            I  LL+   ML  
Sbjct: 253 GIMLLLIAGKMLYN 266


>gi|146329858|ref|YP_001209006.1| hypothetical protein DNO_0075 [Dichelobacter nodosus VCS1703A]
 gi|146233328|gb|ABQ14306.1| conserved hypothetical membrane protein [Dichelobacter nodosus
           VCS1703A]
          Length = 265

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 64/254 (25%), Positives = 122/254 (48%), Gaps = 1/254 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGID-DSICMHVAMGTSLGVIAPT 81
           + ++I A  ++G L+GLFG+GGG+++VP +        I       H+A+G+S  V+  T
Sbjct: 1   MLMMICAGAVAGLLAGLFGIGGGMILVPAILTIMNSQNIPSHGYAQHLAIGSSFAVMMFT 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  S     R  ++  +        L +  +V +++  +V    L   F IF   + +  
Sbjct: 61  SFSSTYAQYRKKSVAWQAFFALAPALVLGAIVGAVVAQYVPNFALQIIFVIFATTVAVRS 120

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L         + P N++ +  G   G LS  +G+GGG      +++    I++A  TS+ 
Sbjct: 121 LLNITPKATHQLPKNHILWAIGTFFGILSSLVGIGGGSLVVPFLVYCNIDIHRAVGTSSA 180

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           +  +IA    +   +SG+ +  LPP SLGF+ +  V I+   +++  P+  +LS+ +   
Sbjct: 181 LGWIIAITGAVGYAFSGFSVPDLPPHSLGFIYLPVVPILALTTVIFAPIGVRLSHRLSSP 240

Query: 262 YLTIGFSMIMFTTS 275
            L  GF +++   +
Sbjct: 241 ALKKGFGILLLFIA 254



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 48/132 (36%), Gaps = 20/132 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++       G LS L G+GGG ++VP L           +I +H A+GTS  +    ++ 
Sbjct: 137 ILWAIGTFFGILSSLVGIGGGSLVVPFLVYC--------NIDIHRAVGTSSALGWIIAIT 188

Query: 85  SFMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
             + +               G I + ++        I   +   +   +    L K F I
Sbjct: 189 GAVGYAFSGFSVPDLPPHSLGFIYLPVVPILALTTVIFAPIGVRLSHRLSSPALKKGFGI 248

Query: 133 FCLLMGILMLKR 144
             L +   ML R
Sbjct: 249 LLLFIAGKMLLR 260



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 43/130 (33%), Gaps = 21/130 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLML---------FYGASIYKATATSAGVSALIA 207
            +    G V G L+G  G+GGG+     +L          +G + + A  +S  V    +
Sbjct: 2   LMMICAGAVAGLLAGLFGIGGGMILVPAILTIMNSQNIPSHGYAQHLAIGSSFAVMMFTS 61

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F +                +    V   A   + P  +L   +   ++  +    L I F
Sbjct: 62  FSSTYA------------QYRKKSVAWQAFFALAPALVLGAIVGAVVAQYVPNFALQIIF 109

Query: 268 SMIMFTTSFV 277
            +   T +  
Sbjct: 110 VIFATTVAVR 119


>gi|34495958|ref|NP_900173.1| hypothetical protein CV_0503 [Chromobacterium violaceum ATCC 12472]
 gi|34101812|gb|AAQ58180.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 269

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 114/229 (49%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++VPV+        +  +   H+A+GTSL V+  TS+ S   H + G ++ +I++     
Sbjct: 31  IIVPVVLAVLSAAHLGGAHAQHLAVGTSLAVMVFTSLSSVRAHHKKGAVDWRIVRGMAPA 90

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           +   T++ SL+   +    L   F ++   + + ML   +    R+ P    +   G   
Sbjct: 91  MVAGTLLGSLIAGWISGLALRWFFVVYAYAVALQMLAGRQPKGGREMPGWGGQGAAGGAI 150

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  +G+GGG  +   M +    ++ A ATSA +   IA    +  +YSGWG  GLPP
Sbjct: 151 GMISSWVGIGGGSMSVPFMSWCNVPVHTAIATSAALGWPIAVSGAVGYVYSGWGAPGLPP 210

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            ++GFV + A+L ++ +++L+ P   K ++ +    L   F+++M   +
Sbjct: 211 GAVGFVYLPAMLALMLMTVLLAPAGAKAAHRLPVPKLKKAFAVLMAAMA 259



 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 47/121 (38%), Gaps = 20/121 (16%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-- 93
           +S   G+GGG + VP +S          ++ +H A+ TS  +  P +V   + +   G  
Sbjct: 153 ISSWVGIGGGSMSVPFMSWC--------NVPVHTAIATSAALGWPIAVSGAVGYVYSGWG 204

Query: 94  -------TINMKILKDWIFVLPITTVV---TSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                   +    L   + ++ +T ++    +     +    L KAFA+    M   ML 
Sbjct: 205 APGLPPGAVGFVYLPAMLALMLMTVLLAPAGAKAAHRLPVPKLKKAFAVLMAAMASEMLY 264

Query: 144 R 144
            
Sbjct: 265 S 265


>gi|78486538|ref|YP_392463.1| hypothetical protein Tcr_2201 [Thiomicrospira crunogena XCL-2]
 gi|78364824|gb|ABB42789.1| Conserved hypothetical protein with DUF81 [Thiomicrospira crunogena
           XCL-2]
          Length = 262

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 126/254 (49%), Gaps = 1/254 (0%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           + I+   ++G  +GL G+GGGL++VPVL+  F    I+    +H+A+GTS+  I  TS+ 
Sbjct: 7   IYILTGIIAGFFAGLLGIGGGLIIVPVLTSVFLYF-IEGPHLVHLAIGTSMATILITSLA 65

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S   H RH  +   I+K     + I  ++   +  ++    L K FA+  L + I ML  
Sbjct: 66  SVKAHHRHDAVRWDIVKTLTPGIFIGGILGGWISQYISAPMLAKIFAVIELGIAIKMLLD 125

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            +    R+ P    + + G + G +S  +G+GGG      M+++  S+ +A ATSA  S 
Sbjct: 126 LQPNPHREMPGIAGRSVAGTIIGSISALVGIGGGALNTPYMVWHNVSMRQAIATSAACSL 185

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
            IA    L  +  GW +  LP  ++G++   A L I+  S    P+   +++ +  K L 
Sbjct: 186 PIAAAGTLGFLIGGWNIPNLPDHAIGYIYWPAFLGIVIASFFTAPIGAAMTHKLPVKTLK 245

Query: 265 IGFSMIMFTTSFVF 278
             F++++   +   
Sbjct: 246 RIFAILLIILAIKM 259



 Score = 53.2 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 44/127 (34%), Gaps = 20/127 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA  + G++S L G+GGG +  P +           ++ M  A+ TS     P +    +
Sbjct: 142 VAGTIIGSISALVGIGGGALNTPYMVW--------HNVSMRQAIATSAACSLPIAAAGTL 193

Query: 88  EH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                            G I        +     T  + + M   +    L + FAI  +
Sbjct: 194 GFLIGGWNIPNLPDHAIGYIYWPAFLGIVIASFFTAPIGAAMTHKLPVKTLKRIFAILLI 253

Query: 136 LMGILML 142
           ++ I M 
Sbjct: 254 ILAIKMF 260


>gi|126731432|ref|ZP_01747238.1| hypothetical protein SSE37_12561 [Sagittula stellata E-37]
 gi|126707968|gb|EBA07028.1| hypothetical protein SSE37_12561 [Sagittula stellata E-37]
          Length = 276

 Score =  206 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 86/270 (31%), Positives = 143/270 (52%), Gaps = 1/270 (0%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + +  ++  +++    +++A    G L+GLFGVGGG + VPV  + F  +G    I M V
Sbjct: 1   MDILANQTVLIEIAAALVLAGAAIGFLAGLFGVGGGAISVPVFYEIFGALGYPPDIAMPV 60

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+GTSL VI PTS++S   H   GT++M ILK W   + I  ++ S +  +         
Sbjct: 61  AVGTSLAVIIPTSIVSARAHNAKGTLDMAILKTWAVPVLIGVMLGSFIARYAAPEVFQAV 120

Query: 130 FAIFCLLMGILMLKRDR-LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F     +  + +L+R +        P  +V  + G   G +S  +G+GGG  +NL +  +
Sbjct: 121 FVTIASVNAVKLLRRGKSWQLRDTLPGPWVMRLGGGGIGLVSAIMGIGGGAVSNLFLTLH 180

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
           G  I++A +TSAGV  LIA P  +  I +G G +GLPP SLGFV++ A  + +P S+L T
Sbjct: 181 GVPIHRAVSTSAGVGVLIAIPGTVGYILAGMGKDGLPPASLGFVSLAAFALTIPTSLLTT 240

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                +++ + ++ L + F   +   +  F
Sbjct: 241 RFGVAMAHRMERRALELAFGTFLALVALRF 270


>gi|261868756|ref|YP_003256678.1| hypothetical protein D11S_2105 [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261414088|gb|ACX83459.1| thymidylate synthase [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 265

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 74/262 (28%), Positives = 119/262 (45%), Gaps = 2/262 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++ +    ++A  ++G L+GLFG+GGGLV+VP+L     ++G+ DS+ M  A+GTS   I
Sbjct: 1   MLTFFLFCLLAGCIAGFLAGLFGIGGGLVIVPMLVYLLPIVGVPDSLLMPTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S   H + G +    LK +   L I+  V+S  IS +     +K FA   + + 
Sbjct: 61  VITAFSSAQRHHKLGNVVWSTLKYFAPALMISAFVSSQYISKLPHEISSKLFACLVVYLA 120

Query: 139 ILMLKRDRLYCERKFP--DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
             M+   +                I G + G  +   G+GGG F    +      I KA 
Sbjct: 121 AKMVLSIKQKHIDPNKKITPLASIIGGGLIGMAASVAGIGGGGFIVPFLNSRNVDIKKAI 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            TSA    L+    +L  + SGW   G+PP+S+GFV + AVL I   S   + L    + 
Sbjct: 181 GTSAFCGMLMGIAGMLSFMVSGWNAPGMPPYSIGFVYLPAVLSITVTSFFTSKLGASATS 240

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            +    L   F+  +   +   
Sbjct: 241 KLPVPTLKKAFAAFLIVVAINM 262



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+   L G  + + G+GGG  +VP L+          ++ +  A+GTS        +   
Sbjct: 144 IIGGGLIGMAASVAGIGGGGFIVPFLN--------SRNVDIKKAIGTSAFCGMLMGIAGM 195

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G + +  +         T+ + +   S +    L KAFA F 
Sbjct: 196 LSFMVSGWNAPGMPPYSIGFVYLPAVLSITVTSFFTSKLGASATSKLPVPTLKKAFAAFL 255

Query: 135 LLMGILMLKR 144
           +++ I ML +
Sbjct: 256 IVVAINMLLK 265


>gi|241763101|ref|ZP_04761161.1| protein of unknown function DUF81 [Acidovorax delafieldii 2AN]
 gi|241367726|gb|EER61980.1| protein of unknown function DUF81 [Acidovorax delafieldii 2AN]
          Length = 272

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 1/231 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L+    L  +   + + +A+ TS+  I  TS+ S   H R G +   I++     + 
Sbjct: 34  VPFLTYILGLQKVGPGLAVKMAIATSMATIMFTSISSVRAHHRRGAVRWDIVRRLAPGIV 93

Query: 109 ITTVVTSL-MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
              +V SL + + +  +FL   F +F       M    +    R+ P    +   G V G
Sbjct: 94  AGGLVASLGVFALLKGAFLAIFFGLFVSFSATQMFLDKKPAPSRQMPGTAGQLTAGGVIG 153

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           FLSG +G GGG  +   M +   +I+ A ATSA +   IA   ++     G  +  LPP 
Sbjct: 154 FLSGLVGAGGGFVSVPFMTWCNVAIHNAVATSAALGFPIALANVVGYAIGGQSVADLPPA 213

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           S G++ + A+ +I   S+L  PL  + ++ +  K L   F+ ++F  +   
Sbjct: 214 SFGYIWLPALAVIATCSVLTAPLGARAAHQLPVKQLKRIFASLLFGLAAYM 264



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + A  + G LSGL G GGG V VP ++          ++ +H A+ TS  +  P ++ + 
Sbjct: 146 LTAGGVIGFLSGLVGAGGGFVSVPFMTWC--------NVAIHNAVATSAALGFPIALANV 197

Query: 87  MEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           + +               G I +  L        +T  + +     +    L + FA   
Sbjct: 198 VGYAIGGQSVADLPPASFGYIWLPALAVIATCSVLTAPLGARAAHQLPVKQLKRIFASLL 257

Query: 135 LLMGILMLKR 144
             +   ML +
Sbjct: 258 FGLAAYMLWK 267


>gi|163857038|ref|YP_001631336.1| putative integral membrane protein [Bordetella petrii DSM 12804]
 gi|163260766|emb|CAP43068.1| putative integral membrane protein [Bordetella petrii]
          Length = 268

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 123/258 (47%), Gaps = 1/258 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +  ++    + G  +GL G+GGG+++VP L+  F   G+   + +H A+ TS+  I  T
Sbjct: 1   MLVCLLALGAVVGFAAGLLGIGGGMLLVPFLTMLFGWQGMPQDLIVHAAIATSMTSILFT 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVV-TSLMISHVDKSFLNKAFAIFCLLMGIL 140
           S+ S   H+R GTI  KI+      + +  +     + + +  ++L+  F++F       
Sbjct: 61  SLSSVRAHQRKGTIQWKIVFAMAPGIIVGGLFSGGAVFAALSTAWLSLFFSLFVGYSAWN 120

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           ML+  +    R+ P        G   GFLSG +G GGG  +   M++   +++ A +TSA
Sbjct: 121 MLRNKKPKPSRQMPGIAGTSAVGAGIGFLSGLVGAGGGFLSVPFMVWCNVALHTAVSTSA 180

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +   IA    +  + SG   N   P  LG++   A+L ++  S+L  P   ++++ +  
Sbjct: 181 ALGFPIALANSIGYVASGLNENASQPGMLGYIYWPALLALVATSVLTAPAGARMAHRLPV 240

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F+ ++F  +   
Sbjct: 241 ATLKRVFAGLLFALAAYM 258



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
                 G LSGL G GGG + VP +           ++ +H A+ TS  +  P ++ + +
Sbjct: 141 AVGAGIGFLSGLVGAGGGFLSVPFMVWC--------NVALHTAVSTSAALGFPIALANSI 192

Query: 88  EHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            +   G             I    L   +    +T    + M   +  + L + FA    
Sbjct: 193 GYVASGLNENASQPGMLGYIYWPALLALVATSVLTAPAGARMAHRLPVATLKRVFAGLLF 252

Query: 136 LMGILMLKR 144
            +   ML +
Sbjct: 253 ALAAYMLAK 261


>gi|163803534|ref|ZP_02197403.1| fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF
           domain containing protein [Vibrio sp. AND4]
 gi|159172669|gb|EDP57522.1| fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF
           domain containing protein [Vibrio sp. AND4]
          Length = 263

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 68/259 (26%), Positives = 125/259 (48%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    L++      G ++GL G+GGGL++VP L     L GI   + MH+A+ TSL  I 
Sbjct: 3   ISLFILLLALGAFVGVMAGLLGIGGGLIVVPALLYLLPLAGIPSEMSMHMALATSLASII 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  S + H + G ++M ++K  +  + I   V + +   +   +L K F +  L +  
Sbjct: 63  VTSGSSALNHLKLGNVDMFVIKWLMPGVVIGGFVGANIAEWIPTHYLPKVFGVIVLCLAA 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M +  +   E+  P + V  ++G   G +S   G+GGG  +   +  +G  + KA  +S
Sbjct: 123 QMFRSIKTKSEKPMPSSPVTVMYGTGIGVVSSLAGIGGGSLSVPFLNKHGIEMRKAVGSS 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +    +IA   ++  I  G+ +  LP +SLG+V + A+  I   S+L T +  K++  + 
Sbjct: 183 SVCGCVIAISGMIGFIIHGYNVEELPDYSLGYVYLPALAAIAMTSMLTTKVGAKIATNLP 242

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              L   F++ +   +   
Sbjct: 243 TAVLKKIFAVFLMFVAATM 261



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 20/126 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL---GVIAPTSVMSF 86
               G +S L G+GGG + VP L+           I M  A+G+S     VIA + ++ F
Sbjct: 146 GTGIGVVSSLAGIGGGSLSVPFLN--------KHGIEMRKAVGSSSVCGCVIAISGMIGF 197

Query: 87  MEH---------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           + H            G + +  L        +TT V + + +++  + L K FA+F + +
Sbjct: 198 IIHGYNVEELPDYSLGYVYLPALAAIAMTSMLTTKVGAKIATNLPTAVLKKIFAVFLMFV 257

Query: 138 GILMLK 143
              ML 
Sbjct: 258 AATMLL 263


>gi|269959598|ref|ZP_06173979.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835656|gb|EEZ89734.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 263

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 69/259 (26%), Positives = 127/259 (49%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    L++      G ++GL G+GGGL++VP L     L GI   + MH+A+ TSL  I 
Sbjct: 3   ISLFILLLALGAFVGVMAGLLGIGGGLIVVPALLYLLPLAGISPEMSMHMALATSLASII 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  S + H + G ++M ++K  +  + I   V + +   +   +L K F +  L + I
Sbjct: 63  VTSGSSALNHLKLGNVDMFVVKWLMPGVVIGGFVGANIAEWIPTHYLPKVFGVIVLCLAI 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M +  +   E+  P + V  ++G   G +S   G+GGG  +   +  +G  + KA  +S
Sbjct: 123 QMFRSIKTKSEKPMPSSPVTVMYGTGIGVVSSLAGIGGGSLSVPFLNKHGIEMRKAVGSS 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +    +IA   ++  I  G+ + GLP +S+G+V + A+  I   S+L T +  K++  + 
Sbjct: 183 SVCGCVIAISGMIGFILHGYKVEGLPDYSVGYVYLPALAAIAMTSMLTTKVGAKMATNLP 242

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              L   F++ +   +   
Sbjct: 243 TAVLKKIFAVFLMFVAATM 261



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 49/126 (38%), Gaps = 20/126 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G +S L G+GGG + VP L+           I M  A+G+S       ++   +  
Sbjct: 146 GTGIGVVSSLAGIGGGSLSVPFLN--------KHGIEMRKAVGSSSVCGCVIAISGMIGF 197

Query: 90  RRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
             HG             + +  L        +TT V + M +++  + L K FA+F + +
Sbjct: 198 ILHGYKVEGLPDYSVGYVYLPALAAIAMTSMLTTKVGAKMATNLPTAVLKKIFAVFLMFV 257

Query: 138 GILMLK 143
              ML 
Sbjct: 258 AATMLL 263


>gi|317484207|ref|ZP_07943136.1| hypothetical protein HMPREF0179_00487 [Bilophila wadsworthia 3_1_6]
 gi|316924556|gb|EFV45713.1| hypothetical protein HMPREF0179_00487 [Bilophila wadsworthia 3_1_6]
          Length = 265

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 124/261 (47%), Gaps = 1/261 (0%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++  +   ++   ++G L+GL GVGGG+V+VP+L  AF        + M +A+GTS+G 
Sbjct: 1   MLISLVVYCLL-GAIAGVLAGLLGVGGGIVIVPMLVFAFGWQNFPPDVLMLMALGTSMGS 59

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I  TS+ S + H R+  +    +++    + I T   S + SHV   FL   F  F   +
Sbjct: 60  IMFTSISSSLAHSRNKGVQWDAVRNITPGILIGTFCGSFLASHVPARFLQLFFVAFLFFV 119

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
              ML   +    R  P      + G + G +S  +G+GGG  +   +L+    + KA  
Sbjct: 120 ITQMLSGKKPKPSRHLPGLGGMSVAGGIIGVVSSLVGIGGGTLSVPFLLWNNLDMRKAIG 179

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TSA +   IA       I +GW    LPP+S G++ + ++  I+ +S+   PL  +L+  
Sbjct: 180 TSAAIGFPIALAGCFGYIVNGWNAANLPPYSFGYIYLPSLFGIVVVSMFTAPLGARLAQT 239

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +    L   F++++       
Sbjct: 240 LPVPKLKKCFALLLIVIGIRM 260



 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + VA  + G +S L G+GGG + VP L          +++ M  A+GTS  +  P ++  
Sbjct: 141 MSVAGGIIGVVSSLVGIGGGTLSVPFLLW--------NNLDMRKAIGTSAAIGFPIALAG 192

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
              +               G I +  L   + V   T  + + +   +    L K FA+ 
Sbjct: 193 CFGYIVNGWNAANLPPYSFGYIYLPSLFGIVVVSMFTAPLGARLAQTLPVPKLKKCFALL 252

Query: 134 CLLMGILMLKR 144
            +++GI ML +
Sbjct: 253 LIVIGIRMLLK 263


>gi|156973288|ref|YP_001444195.1| hypothetical protein VIBHAR_00969 [Vibrio harveyi ATCC BAA-1116]
 gi|156524882|gb|ABU69968.1| hypothetical protein VIBHAR_00969 [Vibrio harveyi ATCC BAA-1116]
          Length = 263

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 68/259 (26%), Positives = 127/259 (49%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    L++      G ++GL G+GGGL++VP L     L GI   + MH+A+ TSL  I 
Sbjct: 3   ISLFILLLALGAFVGVMAGLLGIGGGLIVVPALLYLLPLAGISPEMSMHMALATSLASII 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  S + H + G ++M ++K  +  + I   V + +   +   +L K F +  L + +
Sbjct: 63  VTSGSSALNHLKLGNVDMFVVKWLMPGVVIGGFVGANIAEWIPTHYLPKVFGVIVLCLAV 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M +  +   E+  P + V  ++G   G +S   G+GGG  +   +  +G  + KA  +S
Sbjct: 123 QMFRSIKTKSEKPMPSSPVTMMYGTGIGVVSSLAGIGGGSLSVPFLNKHGIEMRKAVGSS 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +    +IA   ++  I  G+ + GLP +S+G+V + A+  I   S+L T +  K++  + 
Sbjct: 183 SVCGCVIAISGMIGFILHGYKVEGLPDYSVGYVYLPALAAIAMTSMLTTKIGAKMATNLP 242

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              L   F++ +   +   
Sbjct: 243 TAVLKKIFAVFLMFVAATM 261



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 20/126 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G +S L G+GGG + VP L+           I M  A+G+S       ++   +  
Sbjct: 146 GTGIGVVSSLAGIGGGSLSVPFLN--------KHGIEMRKAVGSSSVCGCVIAISGMIGF 197

Query: 90  RRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
             HG             + +  L        +TT + + M +++  + L K FA+F + +
Sbjct: 198 ILHGYKVEGLPDYSVGYVYLPALAAIAMTSMLTTKIGAKMATNLPTAVLKKIFAVFLMFV 257

Query: 138 GILMLK 143
              ML 
Sbjct: 258 AATMLL 263


>gi|310816083|ref|YP_003964047.1| putative transmembrane protein [Ketogulonicigenium vulgare Y25]
 gi|308754818|gb|ADO42747.1| putative transmembrane protein [Ketogulonicigenium vulgare Y25]
          Length = 279

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 89/267 (33%), Positives = 158/267 (59%), Gaps = 1/267 (0%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            L  D ++  I  +++A  LSG ++GLFG+GGG + VPVL + F+L+G+D ++CM +A+G
Sbjct: 5   ALGLDALIPMIGALVIAGALSGLMAGLFGIGGGAISVPVLYEIFRLIGVDPAVCMPLAVG 64

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           TSL +I PTS  S   H   GT++M++++ W   + +   + +++  + + +     F I
Sbjct: 65  TSLAIIVPTSFTSARGHYLRGTLDMELIRIWAVPVILGVAIGAVIARYANAAVFQIVFVI 124

Query: 133 FCLLMGILML-KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
              +  + +L    R       P  +   I+G++ G LS  +G+GGG  TNL++  YG  
Sbjct: 125 VASVNALKLLSGGARWQIADSLPGRFAIRIYGLIIGLLSSLMGIGGGTITNLVLTLYGID 184

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           I +A +T+AGV  LIA P  +  + +GWG  GLPP +LG+V+  A+++ +P ++L+TP+ 
Sbjct: 185 IRRAISTAAGVGTLIALPGAIGYVIAGWGKPGLPPDALGYVSTLALVLTVPTTVLVTPIG 244

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             L++ + ++ L + F + + T S  F
Sbjct: 245 VWLAHTLPRRTLEVCFGLFLLTVSGRF 271


>gi|51244235|ref|YP_064119.1| hypothetical protein DP0383 [Desulfotalea psychrophila LSv54]
 gi|50875272|emb|CAG35112.1| conserved hypothetical membrane protein [Desulfotalea psychrophila
           LSv54]
          Length = 262

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 1/229 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L+ A     +     +HVA+GTSL  I  TS+ S   H + G +   ++      + +
Sbjct: 30  PMLTFALASQ-VPPEYLLHVALGTSLASIICTSLSSLWAHHKRGAVLWPVVGRITPGILV 88

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T   + + S +  +FL   F +F L +   ML   R    R  P     +  G V G  
Sbjct: 89  GTFFGAWVASQLSTTFLKVFFGVFLLYVATQMLLSIRPNASRDLPGTVGIFGAGSVIGTF 148

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   +++   ++++A  TSA +   IA       I +G  ++GLP  + 
Sbjct: 149 SSLVGIGGGTLSVPFLVWNNIAMHQAIGTSAAIGLPIALAGSAGYIVNGLMVSGLPAGTF 208

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           GFV++ A+  I+  S+   PL  +L++ +    L   FSM+++      
Sbjct: 209 GFVHLTALAGIVLTSVCTAPLGARLAHSLPVAKLKKIFSMLLYVVGLKM 257



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I  A  + GT S L G+GGG + VP L          ++I MH A+GTS  +  P ++  
Sbjct: 138 IFGAGSVIGTFSSLVGIGGGTLSVPFLVW--------NNIAMHQAIGTSAAIGLPIALAG 189

Query: 86  FMEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
              +               G +++  L   +     T  + + +   +  + L K F++ 
Sbjct: 190 SAGYIVNGLMVSGLPAGTFGFVHLTALAGIVLTSVCTAPLGARLAHSLPVAKLKKIFSML 249

Query: 134 CLLMGILML 142
             ++G+ ML
Sbjct: 250 LYVVGLKML 258


>gi|163759722|ref|ZP_02166807.1| hypothetical protein HPDFL43_10222 [Hoeflea phototrophica DFL-43]
 gi|162283319|gb|EDQ33605.1| hypothetical protein HPDFL43_10222 [Hoeflea phototrophica DFL-43]
          Length = 272

 Score =  205 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 92/238 (38%), Positives = 151/238 (63%), Gaps = 1/238 (0%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           +GGG ++VPV  + F L+G+D+++ MH+A+GTSL +I PTS+ S + H+  G++++++LK
Sbjct: 30  IGGGAILVPVFYQVFGLLGVDEAVRMHLAIGTSLAIIVPTSIRSLLSHKLRGSVDLELLK 89

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK-RDRLYCERKFPDNYVKY 160
            WI  +P+  V  SL+ + V    L   FAI  +++GI ML  R+        P N ++ 
Sbjct: 90  SWIVPVPLGVVAASLIAASVSSGGLRAIFAIISVIVGIRMLLNRESWRLGADLPPNPMRA 149

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
             G+V G LS  +G+GGG+  N  M  +G  +++A ATSAGV  LI+ P L   +++G G
Sbjct: 150 AVGVVLGLLSALMGIGGGVLNNTFMTLFGRPVHQAVATSAGVGVLISIPGLFGYVWAGLG 209

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +GLPP+S G+VN  AV +I+PI++LI PL  +L++ + K+ L +GF + +   +  F
Sbjct: 210 ASGLPPFSTGYVNWIAVALIIPITLLIAPLGVRLAHSLDKRQLEVGFGIFILLVAARF 267



 Score = 40.4 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 45/130 (34%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
                + G LS L G+GGG++     +    L G      +H A+ TS GV    S+   
Sbjct: 149 AAVGVVLGLLSALMGIGGGVLN----NTFMTLFGRP----VHQAVATSAGVGVLISIPGL 200

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
             +               G +N   +   I +  +   +   +   +DK  L   F IF 
Sbjct: 201 FGYVWAGLGASGLPPFSTGYVNWIAVALIIPITLLIAPLGVRLAHSLDKRQLEVGFGIFI 260

Query: 135 LLMGILMLKR 144
           LL+       
Sbjct: 261 LLVAARFFYS 270


>gi|299134803|ref|ZP_07027995.1| protein of unknown function DUF81 [Afipia sp. 1NLS2]
 gi|298590613|gb|EFI50816.1| protein of unknown function DUF81 [Afipia sp. 1NLS2]
          Length = 284

 Score =  205 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 91/278 (32%), Positives = 154/278 (55%), Gaps = 9/278 (3%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  L    +++    +I    L+G L+GLFGVGGG ++VPVL + F++M +     M + 
Sbjct: 1   MPQLPIAEIIELAIALIAVGALAGFLAGLFGVGGGAILVPVLYELFRIMDVPLETRMPLC 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL +I PT+V S++EHRRHG+++M IL+ W   + I     SL+  +  +      F
Sbjct: 61  VGTSLAIIIPTAVRSYLEHRRHGSVDMNILRTWTIPILIGVTAGSLIARYAPEQVFKYVF 120

Query: 131 AIFCLLMGIL-MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
                   +  +L +D       FP   +  I+G + G LS  +G+GGG+F+NLLM  YG
Sbjct: 121 VAVAWSAAVRLILGKDSWKIGDAFPTGPLMRIYGFIIGILSTLMGIGGGLFSNLLMTMYG 180

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS--------LGFVNIGAVLIIL 241
            SI+++ ATS+G++ LI+ P  +  IY+GW      P +        +G++++   ++++
Sbjct: 181 RSIHQSVATSSGIAVLISIPGTIGYIYAGWPAAAKFPATTILQFPLAIGYISLIGAIMVM 240

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           P S+L  P   K ++++ K+ L I F + +F     FA
Sbjct: 241 PSSLLTAPFGAKAAHLMSKRALEIAFGLYLFIMGSRFA 278


>gi|78222315|ref|YP_384062.1| hypothetical protein Gmet_1097 [Geobacter metallireducens GS-15]
 gi|78193570|gb|ABB31337.1| protein of unknown function DUF81 [Geobacter metallireducens GS-15]
          Length = 263

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 102/226 (45%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+  F   G+      H+A+GTSL  I  TSV S   H   G +  ++++     +  
Sbjct: 30  PALTFLFTAQGLPAPYIAHLALGTSLATIIFTSVSSLRAHHGRGAVEWRVVRRISAGIVA 89

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T+  S + + +    L   F +F   + I ML   R    R+ P        G V G +
Sbjct: 90  GTLAGSWVAAQLSTRSLKVFFVVFLYYVAIQMLLNIRPKPSRQLPGTGGMLGVGGVIGAV 149

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  +G+GGG  +   M++   S++ A  TSA +   IA       + +G  +  LPPWS+
Sbjct: 150 SSLVGIGGGSLSVPFMVWCNISMHNAIGTSAAIGFPIALAGAAGYMANGLVVTSLPPWSV 209

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           GFV + A+  I   S++  P   +L++ +    L   F++++    
Sbjct: 210 GFVYLPALAGIALASVITAPFGARLAHNLPVSGLKKIFALLLIVMG 255



 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 20/119 (16%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
           +S L G+GGG + VP +           +I MH A+GTS  +  P ++     +  +G +
Sbjct: 149 VSSLVGIGGGSLSVPFMVWC--------NISMHNAIGTSAAIGFPIALAGAAGYMANGLV 200

Query: 96  N------------MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                        +  L        IT    + +  ++  S L K FA+  ++MG  +L
Sbjct: 201 VTSLPPWSVGFVYLPALAGIALASVITAPFGARLAHNLPVSGLKKIFALLLIVMGTKLL 259


>gi|292490792|ref|YP_003526231.1| hypothetical protein Nhal_0664 [Nitrosococcus halophilus Nc4]
 gi|291579387|gb|ADE13844.1| protein of unknown function DUF81 [Nitrosococcus halophilus Nc4]
          Length = 273

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 103/232 (44%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+V VL   F   GI D + MH+A+GTS   I  TS+ +   H R   +   I+      
Sbjct: 28  VIVAVLVHVFSAQGISDELSMHMAIGTSQATIVLTSMAAIWAHHRREGVLWLIMAAMAPG 87

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + +  ++ +++   +    L   F  F LL+   M    RL      P  ++  + G+  
Sbjct: 88  IMLGALLGAVIADALSGQVLKGLFGGFALLIAWQMGIGFRLTAAHPLPQRWILALVGVAI 147

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S   G+GGG FT   + ++G  +  A  T++     +A       ++ GW   GLP 
Sbjct: 148 GGVSALFGIGGGSFTVPYLSWHGIPMRNAVGTASACGFPLAIGGTCGFVWMGWDKLGLPA 207

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           WS G+V   A + I+  S+L  PL  +L++ +    L   F++ +       
Sbjct: 208 WSSGYVYWPAAVGIVATSMLFAPLGARLAHRLASITLKRVFAIFLGYLGLNM 259



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 20/132 (15%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +     G +S LFG+GGG   VP LS           I M  A+GT+     P ++
Sbjct: 138 WILALVGVAIGGVSALFGIGGGSFTVPYLSW--------HGIPMRNAVGTASACGFPLAI 189

Query: 84  MSF------------MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
                          +     G +        +    +   + + +   +    L + FA
Sbjct: 190 GGTCGFVWMGWDKLGLPAWSSGYVYWPAAVGIVATSMLFAPLGARLAHRLASITLKRVFA 249

Query: 132 IFCLLMGILMLK 143
           IF   +G+ ML 
Sbjct: 250 IFLGYLGLNMLL 261


>gi|224823409|ref|ZP_03696518.1| protein of unknown function DUF81 [Lutiella nitroferrum 2002]
 gi|224603864|gb|EEG10038.1| protein of unknown function DUF81 [Lutiella nitroferrum 2002]
          Length = 268

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 59/215 (27%), Positives = 102/215 (47%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
               H+A+GTSL V+  TS  S + H R G +N +I++     +   T + SL+   +  
Sbjct: 48  EHVQHLAVGTSLAVMVFTSFSSVLAHHRKGAVNWRIVRGMAPAIVAGTFLGSLVAGLIPG 107

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
             L   F ++  L G+ +    +    R  P    +   G   G +S  +G+GGG  +  
Sbjct: 108 HVLRWFFVVYAYLAGLQLFFGAKPAGSRDMPGLLGQCGAGGAIGMISSWVGIGGGSMSVP 167

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
            M +    ++ A ATSA +   IA    +  + SGWG  GLP  SLGFV + A L ++ +
Sbjct: 168 FMNWCNVPVHTAIATSAALGWPIAVSGAIGYLVSGWGAPGLPWGSLGFVYLPATLALMLM 227

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++L  PL  ++++ +    L   F+++M   +   
Sbjct: 228 TVLCAPLGARMAHALPVAGLKRAFAVLMAVMASQM 262



 Score = 43.1 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 20/128 (15%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A    G +S   G+GGG + VP ++          ++ +H A+ TS  +  P +V   + 
Sbjct: 146 AGGAIGMISSWVGIGGGSMSVPFMNWC--------NVPVHTAIATSAALGWPIAVSGAIG 197

Query: 89  HR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           +               G + +      + +  +   + + M   +  + L +AFA+   +
Sbjct: 198 YLVSGWGAPGLPWGSLGFVYLPATLALMLMTVLCAPLGARMAHALPVAGLKRAFAVLMAV 257

Query: 137 MGILMLKR 144
           M   ML  
Sbjct: 258 MASQMLYS 265


>gi|323492565|ref|ZP_08097711.1| hypothetical protein VIBR0546_00879 [Vibrio brasiliensis LMG 20546]
 gi|323313167|gb|EGA66285.1| hypothetical protein VIBR0546_00879 [Vibrio brasiliensis LMG 20546]
          Length = 254

 Score =  204 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 70/249 (28%), Positives = 124/249 (49%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +    + G ++GL G+GGGL++VP L       GI+ SI MH+A+ TSL  I  TS  S 
Sbjct: 1   MALGAVVGVMAGLLGIGGGLIVVPALLFMLPAAGIEASISMHIALATSLATIIATSGSSA 60

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           + H + G ++M ++K  +  + +   + + +   +    L + F I  LL+ I ML   R
Sbjct: 61  LNHFKLGNVDMFVVKWLMPGVVVGGFLGANVAEWIPSQHLPRVFGIIVLLLAIQMLFSIR 120

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
               +  P       +G   G +S   G+GGG  +   +  +G  + KA  +S+    LI
Sbjct: 121 GKASKSMPGTAATMAYGTGIGVISSLAGIGGGSLSVPFLNRHGIEMRKAVGSSSVCGCLI 180

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           A   ++  I  G+ ++ LPP+S+G+V + A++ I   S+L T +  KL+  +    L   
Sbjct: 181 AVSGMIGFILHGYQVDALPPYSVGYVYLPALIAIASTSMLTTRIGAKLASSLPTPTLKKI 240

Query: 267 FSMIMFTTS 275
           F++ +   +
Sbjct: 241 FALFLMFVA 249



 Score = 42.4 bits (99), Expect = 0.067,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 20/126 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV---IAPTSVMSF 86
               G +S L G+GGG + VP L++          I M  A+G+S      IA + ++ F
Sbjct: 137 GTGIGVISSLAGIGGGSLSVPFLNR--------HGIEMRKAVGSSSVCGCLIAVSGMIGF 188

Query: 87  MEH---------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           + H            G + +  L        +TT + + + S +    L K FA+F + +
Sbjct: 189 ILHGYQVDALPPYSVGYVYLPALIAIASTSMLTTRIGAKLASSLPTPTLKKIFALFLMFV 248

Query: 138 GILMLK 143
              ML 
Sbjct: 249 AGTMLL 254


>gi|220935590|ref|YP_002514489.1| protein of unknown function DUF81 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996900|gb|ACL73502.1| protein of unknown function DUF81 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 261

 Score =  204 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 104/229 (45%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   +   G+D ++  H+A+GTSL  I PT++ S   H  HG +   ++      +  
Sbjct: 31  PVLVWLYVHQGVDAAVITHLAIGTSLATIVPTAIASARAHHAHGAVRWDLVWRLAPGVVF 90

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
             +  + +   +    L + F +F + + + ML   R   +R  P        G V G +
Sbjct: 91  GALAGATLAEFLSSDMLRRVFGVFEIALALYMLIGTRPAPQRPLPGVATLSAGGGVIGLV 150

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  LG+GGG  T   ++++  ++ +A  T++ V   IA       +  GW   GLP WS 
Sbjct: 151 SSLLGIGGGTLTVPYLVWFNVAVRQAIGTASAVGLPIALAGAAGFMIHGWQAQGLPAWSA 210

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+++  A+  I   S L  P+  +L++ +    +   F++++       
Sbjct: 211 GYIHGPALAGIAIASFLTAPIGARLTHRLPVPLVRRLFALLLMGLGVKM 259



 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 50/132 (37%), Gaps = 20/132 (15%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +     + G +S L G+GGG + VP L           ++ +  A+GT+  V  P +
Sbjct: 137 VATLSAGGGVIGLVSSLLGIGGGTLTVPYLVWF--------NVAVRQAIGTASAVGLPIA 188

Query: 83  VMSFMEHRRH------------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +        H            G I+   L        +T  + + +   +    + + F
Sbjct: 189 LAGAAGFMIHGWQAQGLPAWSAGYIHGPALAGIAIASFLTAPIGARLTHRLPVPLVRRLF 248

Query: 131 AIFCLLMGILML 142
           A+  + +G+ ML
Sbjct: 249 ALLLMGLGVKML 260


>gi|119896927|ref|YP_932140.1| hypothetical protein azo0636 [Azoarcus sp. BH72]
 gi|119669340|emb|CAL93253.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
          Length = 268

 Score =  204 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 69/251 (27%), Positives = 119/251 (47%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +   + G  +GL G+GGG +MVP+L+  F   G   +  +H+A+GTS+  I  TS+ S  
Sbjct: 12  LLGAVVGFFAGLLGIGGGGIMVPMLTTLFIAQGFPLAQVVHLALGTSMAAIVLTSISSLR 71

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            H RHG +  ++++     + + T   + + +H D   L   FA+F   +   ML   + 
Sbjct: 72  THHRHGAVRWEVVRGITPGILLGTFGGTFIAAHADTVPLAIFFAVFMAYVSTQMLINVKP 131

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
              R+ P        G+  G +S  + +GGG  +   M +    +  A  TSA +   IA
Sbjct: 132 KPSRELPGTLGLGAAGLGIGGVSALVAIGGGSLSVPFMTWCNVKVQHAIGTSAAIGLPIA 191

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
               L  + +GWG  GLPP SLGFV + A++++  +S    P+   L++ +    L   F
Sbjct: 192 LAGTLGYLINGWGEAGLPPLSLGFVYLPALVLVSGVSYFTAPVGAALAHRLPVATLKKIF 251

Query: 268 SMIMFTTSFVF 278
           + ++       
Sbjct: 252 AGVLILLCVKM 262



 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 20/121 (16%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR----- 90
           +S L  +GGG + VP ++          ++ +  A+GTS  +  P ++   + +      
Sbjct: 153 VSALVAIGGGSLSVPFMTWC--------NVKVQHAIGTSAAIGLPIALAGTLGYLINGWG 204

Query: 91  -------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G + +  L     V   T  V + +   +  + L K FA   +L+ + ML 
Sbjct: 205 EAGLPPLSLGFVYLPALVLVSGVSYFTAPVGAALAHRLPVATLKKIFAGVLILLCVKMLY 264

Query: 144 R 144
            
Sbjct: 265 S 265


>gi|317052563|ref|YP_004113679.1| hypothetical protein Selin_2408 [Desulfurispirillum indicum S5]
 gi|316947647|gb|ADU67123.1| protein of unknown function DUF81 [Desulfurispirillum indicum S5]
          Length = 268

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 68/255 (26%), Positives = 117/255 (45%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I    +    +G ++G  GVGGG+++VP L   F   G+D ++ + +A+ TSL  I  TS
Sbjct: 6   ILHFALTGIAAGIIAGTLGVGGGVIIVPSLLYLFARQGMDPALAIKLAVATSLSTIIVTS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + +   + G I  ++++ W   + +   ++  + S +    L      F    GI ML
Sbjct: 66  ISAILAQMKRGAILWQVVRRWTPYILLGAFLSGTVASLLPAFALQAFIGCFLTYAGINML 125

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
           +R      R+ P        G   G +SG  G+ GG     L++     +  A ATS  +
Sbjct: 126 RRWTPNPRRQLPGGVGTAGAGTFVGLVSGMAGIAGGNVIIPLLVASNVPMQNAVATSITL 185

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
           +  IA    +  +Y+GW   GLP WSLG+V + A+L I   + L  P    LS+ +    
Sbjct: 186 ALPIATAGTIGFVYAGWHSLGLPAWSLGYVYLPALLGIATFTFLSVPFGVALSHRLPAPR 245

Query: 263 LTIGFSMIMFTTSFV 277
           L   F +++   +  
Sbjct: 246 LKRIFGLLVLLVAAR 260



 Score = 42.8 bits (100), Expect = 0.057,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 46/125 (36%), Gaps = 20/125 (16%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH-- 89
             G +SG+ G+ GG V++P+L        +  ++ M  A+ TS+ +  P +    +    
Sbjct: 148 FVGLVSGMAGIAGGNVIIPLL--------VASNVPMQNAVATSITLALPIATAGTIGFVY 199

Query: 90  ----------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                        G + +  L        ++      +   +    L + F +  LL+  
Sbjct: 200 AGWHSLGLPAWSLGYVYLPALLGIATFTFLSVPFGVALSHRLPAPRLKRIFGLLVLLVAA 259

Query: 140 LMLKR 144
            +L +
Sbjct: 260 RILWK 264


>gi|251791891|ref|YP_003006611.1| hypothetical protein NT05HA_0082 [Aggregatibacter aphrophilus
           NJ8700]
 gi|247533278|gb|ACS96524.1| thymidylate synthase [Aggregatibacter aphrophilus NJ8700]
          Length = 265

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 2/262 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++ +    ++A   +G L+GLFG+GGG+V+VP++     ++G+ DS+ M  A+GTS   I
Sbjct: 1   MLTFFLFCLLAGCAAGFLAGLFGIGGGMVIVPMMVYLLPIVGVPDSLLMSTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S   H + G +    LK +   L I+  ++   IS +      K FA   + + 
Sbjct: 61  VITAFSSAQRHHKLGNVVWSTLKYFAPALMISAFISGQYISKLPPEISGKLFACLVVYLA 120

Query: 139 ILMLKRDRLYCERKFP--DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
             M+   +                I G + G +S   G+GGG F    +      I KA 
Sbjct: 121 AKMILSIKPKNIDPNKKITPLSSIIGGSLIGMISSVAGIGGGGFIVPFLNSRNVDIKKAI 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            TSA    L+    +L  + SGWG  G+P +S+GFV + AVL I   S   + L   ++ 
Sbjct: 181 GTSAFCGMLMGIAGMLSFMVSGWGTLGMPNYSIGFVYLPAVLGITITSFFTSKLGANMTN 240

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            +    L  GF+  +   +   
Sbjct: 241 RLPVSTLKKGFAAFLIVVAINM 262



 Score = 46.2 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVL----SKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I+   L G +S + G+GGG  +VP L        + +G      M + +   L  +    
Sbjct: 144 IIGGSLIGMISSVAGIGGGGFIVPFLNSRNVDIKKAIGTSAFCGMLMGIAGMLSFMVSGW 203

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               M +   G + +  +         T+ + + M + +  S L K FA F +++ I ML
Sbjct: 204 GTLGMPNYSIGFVYLPAVLGITITSFFTSKLGANMTNRLPVSTLKKGFAAFLIVVAINML 263

Query: 143 KR 144
            +
Sbjct: 264 LK 265


>gi|218708559|ref|YP_002416180.1| hypothetical protein VS_0525 [Vibrio splendidus LGP32]
 gi|218321578|emb|CAV17530.1| hypothetical protein VS_0525 [Vibrio splendidus LGP32]
          Length = 263

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 105/229 (45%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       GI     M +A+ TSL  I  TS  S + H + G + + ++K  +  + +
Sbjct: 33  PALLFLLPKAGIPQEFAMQMALATSLSTIIVTSGSSAINHLKLGNVEIFVVKWLMPGVVV 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
              + S +   +   +L K F +  L++ + ML   R   ++  P +    + G   G +
Sbjct: 93  GGFLGSFVADVIPAQYLPKVFGVIVLVLALQMLLSIRSKSQKSMPGSAKTVLCGGGIGLV 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S   G+GGG  +   +  +G  + KA  +S+    +IA   +L  I+ G  ++ LP +SL
Sbjct: 153 SSLAGIGGGSLSVPFLNHHGVEMRKAVGSSSVCGCVIAISGMLGFIWHGSSVDDLPAYSL 212

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V + A++ I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 213 GYVYLPALIAISCTSVLTTRVGAKLATQLPTPVLKKFFAVFLMFIAATM 261



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 20/129 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G +S L G+GGG + VP L+           + M  A+G+S       ++   
Sbjct: 143 VLCGGGIGLVSSLAGIGGGSLSVPFLNH--------HGVEMRKAVGSSSVCGCVIAISGM 194

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G + +  L        +TT V + + + +    L K FA+F 
Sbjct: 195 LGFIWHGSSVDDLPAYSLGYVYLPALIAISCTSVLTTRVGAKLATQLPTPVLKKFFAVFL 254

Query: 135 LLMGILMLK 143
           + +   ML 
Sbjct: 255 MFIAATMLL 263


>gi|84393970|ref|ZP_00992710.1| hypothetical protein V12B01_08712 [Vibrio splendidus 12B01]
 gi|84375414|gb|EAP92321.1| hypothetical protein V12B01_08712 [Vibrio splendidus 12B01]
          Length = 263

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 105/229 (45%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       GI     M +A+ TSL  I  TS  S + H + G + + ++K  +  + I
Sbjct: 33  PALLFLLPKAGIPQEFAMQMALATSLSTIIVTSGSSAINHLKLGNVELFVVKWLMPGVVI 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
              + S +   +   +L K F +  L++ + ML   R   ++  P +    + G   G +
Sbjct: 93  GGFLGSFVADVIPAQYLPKVFGVIVLVLALQMLLSIRSKSQKSMPGSAKTMLCGGGIGLV 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S   G+GGG  +   +  +G  + KA  +S+    +IA   +L  I+ G  ++ LP +SL
Sbjct: 153 SSLAGIGGGSLSVPFLNHHGVEMRKAVGSSSVCGCVIAISGMLGFIWHGSSVDDLPAYSL 212

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V + A++ I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 213 GYVYLPALIAISCTSVLTTRVGAKLATQLPTPVLKKFFAVFLMFIAATM 261



 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 20/126 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G +S L G+GGG + VP L+           + M  A+G+S       ++   +  
Sbjct: 146 GGGIGLVSSLAGIGGGSLSVPFLNH--------HGVEMRKAVGSSSVCGCVIAISGMLGF 197

Query: 90  ------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G + +  L        +TT V + + + +    L K FA+F + +
Sbjct: 198 IWHGSSVDDLPAYSLGYVYLPALIAISCTSVLTTRVGAKLATQLPTPVLKKFFAVFLMFI 257

Query: 138 GILMLK 143
              ML 
Sbjct: 258 AATMLL 263


>gi|310816311|ref|YP_003964275.1| membrane protein [Ketogulonicigenium vulgare Y25]
 gi|308755046|gb|ADO42975.1| membrane protein [Ketogulonicigenium vulgare Y25]
          Length = 275

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 131/262 (50%), Gaps = 1/262 (0%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++  I ++I     +G ++GL GVGGG+V+VP     F  +G D    M V + TSL  
Sbjct: 7   TLLPLIAILIAVGAFAGVIAGLLGVGGGIVLVPAFFYVFTALGYDGPQIMQVCLATSLAT 66

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I  TS+ S M H + G ++  +LK W   + +  V+  L+ + +    L   F +  +++
Sbjct: 67  IIFTSIRSVMAHHKKGAVDWDVLKTWAPGIVVGAVIGVLVAAQLRSVALQAIFGVLGMVI 126

Query: 138 GILM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           G+ M   R       + P   V+     V GFLS  +G+GGG F   +M  YG  I++A 
Sbjct: 127 GLYMAFGRPDWRIRDEMPKGPVRAALSSVIGFLSVLMGIGGGSFGVPVMTLYGVPIHRAV 186

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           AT++G    IA P+++  +         PP ++G VN+ A ++++ +++L T    +L++
Sbjct: 187 ATASGFGLTIALPSVIGFLLVPIDAASRPPLTVGAVNLPAFIVVIGVTMLTTGYGVRLAH 246

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            +  K L   F++ +   +   
Sbjct: 247 AMNPKPLKRVFAIFLILVAANM 268



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV-------- 83
           + G LS L G+GGG   VPV+     L G+     +  A G  L +  P+ +        
Sbjct: 155 VIGFLSVLMGIGGGSFGVPVM----TLYGVPIHRAVATASGFGLTIALPSVIGFLLVPID 210

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +       G +N+      I V  +TT     +   ++   L + FAIF +L+   ML+
Sbjct: 211 AASRPPLTVGAVNLPAFIVVIGVTMLTTGYGVRLAHAMNPKPLKRVFAIFLILVAANMLR 270

Query: 144 R 144
           +
Sbjct: 271 K 271


>gi|33593832|ref|NP_881476.1| putative integral membrane protein [Bordetella pertussis Tohama I]
 gi|33597092|ref|NP_884735.1| putative integral membrane protein [Bordetella parapertussis 12822]
 gi|33600936|ref|NP_888496.1| putative integral membrane protein [Bordetella bronchiseptica RB50]
 gi|33563905|emb|CAE43164.1| putative integral membrane protein [Bordetella pertussis Tohama I]
 gi|33566543|emb|CAE37799.1| putative integral membrane protein [Bordetella parapertussis]
 gi|33575371|emb|CAE32448.1| putative integral membrane protein [Bordetella bronchiseptica RB50]
 gi|332383251|gb|AEE68098.1| putative integral membrane protein [Bordetella pertussis CS]
          Length = 272

 Score =  203 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 126/260 (48%), Gaps = 1/260 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  +  ++    + G  +GL G+GGG+++VP L+  F   G+   + +H A+ TS+  I 
Sbjct: 3   VVMLICLLALGAVVGFAAGLLGIGGGMLLVPFLTMLFAWQGMPGDLVVHAAIATSMTSIL 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV-TSLMISHVDKSFLNKAFAIFCLLMG 138
            TSV S   H++ GTI   I+      + I  ++    + + +  ++L+  FA+F    G
Sbjct: 63  FTSVSSVRAHQKRGTIQWSIVWAMAPGIIIGGLLSGGAVFAALSTAWLSLFFALFVGYSG 122

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             ML+  +    R+ P        G   GFLSG +G GGG  +   M++   +++ A +T
Sbjct: 123 WNMLRSKKPKASRQMPGIVGTSAAGAGIGFLSGLVGAGGGFLSVPFMVWCNVALHTAVST 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           SA +   IA    +  + SG   +   P  LG++   A+L ++  S+L  PL  ++++ +
Sbjct: 183 SAALGFPIALANSVGYVISGLNESVTRPGMLGYIYWPALLALVATSVLTAPLGARMAHRL 242

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F+ ++F  +   
Sbjct: 243 PVGTLKRVFATLLFALAAYM 262



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
            A    G LSGL G GGG + VP +           ++ +H A+ TS  +  P ++ + +
Sbjct: 145 AAGAGIGFLSGLVGAGGGFLSVPFMVWC--------NVALHTAVSTSAALGFPIALANSV 196

Query: 88  EHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            +               G I    L   +    +T  + + M   +    L + FA    
Sbjct: 197 GYVISGLNESVTRPGMLGYIYWPALLALVATSVLTAPLGARMAHRLPVGTLKRVFATLLF 256

Query: 136 LMGILMLKR 144
            +   ML +
Sbjct: 257 ALAAYMLTK 265


>gi|119947276|ref|YP_944956.1| hypothetical protein Ping_3677 [Psychromonas ingrahamii 37]
 gi|119865880|gb|ABM05357.1| hypothetical protein DUF81 [Psychromonas ingrahamii 37]
          Length = 267

 Score =  203 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 66/259 (25%), Positives = 122/259 (47%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +++I   ++     G ++GL G+GGG +MVP+L+  F   G+     +H+A+GTS+  + 
Sbjct: 4   IEWILSFLLLGTFVGVMAGLLGIGGGGIMVPILTTIFLAQGLPVEKVVHLALGTSMASMI 63

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  S   H  +  +   I+K     + + T   + + S +D  +L   F+IF   + I
Sbjct: 64  FTSFSSMRAHNSNDAVIWVIVKGISLGVLLGTFFATFVASKIDSIYLAIFFSIFMAYVSI 123

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M    +   ++    N   +  G   G +S  + +GGG  T   +++   +I KA  TS
Sbjct: 124 QMFLNKKPQPDKNISGNKEIFFAGTGIGAISAFVSIGGGSLTVPYLVWRNINIKKAVGTS 183

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A +   I+    L  + +GW    +  ++ GF+ + AV++I   S    P   KL++ + 
Sbjct: 184 AAIGLPISIAGTLGYLINGWSNTSVENYTFGFIYLPAVVLISITSFFSAPYGVKLAHYLP 243

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              L   FS+++ T S   
Sbjct: 244 VSVLKKIFSLLLITLSIKM 262



 Score = 42.4 bits (99), Expect = 0.070,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I  A    G +S    +GGG + VP L           +I +  A+GTS  +  P S+  
Sbjct: 143 IFFAGTGIGAISAFVSIGGGSLTVPYLVW--------RNINIKKAVGTSAAIGLPISIAG 194

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G I +  +         +      +  ++  S L K F++ 
Sbjct: 195 TLGYLINGWSNTSVENYTFGFIYLPAVVLISITSFFSAPYGVKLAHYLPVSVLKKIFSLL 254

Query: 134 CLLMGILML 142
            + + I ML
Sbjct: 255 LITLSIKML 263


>gi|317402804|gb|EFV83348.1| integral membrane protein [Achromobacter xylosoxidans C54]
          Length = 268

 Score =  203 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 128/258 (49%), Gaps = 1/258 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +  ++    ++G  +GL G+GGG+++VP L+  F   G+   + +H A+ TS+  I  T
Sbjct: 1   MVICLLALGAVAGFAAGLLGIGGGMLLVPFLTMLFAWKGMPADLVVHAAIATSMTSILFT 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVV-TSLMISHVDKSFLNKAFAIFCLLMGIL 140
           S+ S   H++ GTI  +I+      + +  ++    + + +   +L+  FA+F    G  
Sbjct: 61  SISSVRAHQQKGTIKWRIVWAMAPGIILGGLLSGGAVFAALSTLWLSLFFALFVGYSGWN 120

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           ML+  +    R+ P        G   GFLSG +G GGG  +   M++   +++ A +TSA
Sbjct: 121 MLRNKKPKPSRQMPGVVGTSAAGAGIGFLSGLVGAGGGFLSVPFMVWCNVALHNAVSTSA 180

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +   IA    +  + SG       P  LG++   A+L+++ +S+L  PL  ++++ +  
Sbjct: 181 ALGFPIALANSIGYVVSGLNEGATRPGMLGYIYWPALLVLVCVSVLTAPLGARMAHRLPV 240

Query: 261 KYLTIGFSMIMFTTSFVF 278
           + L   F+ ++F  +   
Sbjct: 241 QTLKRVFACLLFALAAYM 258



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
            A    G LSGL G GGG + VP +           ++ +H A+ TS  +  P ++ + +
Sbjct: 141 AAGAGIGFLSGLVGAGGGFLSVPFMVWC--------NVALHNAVSTSAALGFPIALANSI 192

Query: 88  EHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            +               G I    L   + V  +T  + + M   +    L + FA    
Sbjct: 193 GYVVSGLNEGATRPGMLGYIYWPALLVLVCVSVLTAPLGARMAHRLPVQTLKRVFACLLF 252

Query: 136 LMGILMLKR 144
            +   ML +
Sbjct: 253 ALAAYMLFK 261


>gi|332141005|ref|YP_004426743.1| hypothetical protein MADE_1008025 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551027|gb|AEA97745.1| hypothetical protein MADE_1008025 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 272

 Score =  203 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 75/259 (28%), Positives = 122/259 (47%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I  +I     +G L+G+ GVGGG+V+VPVL   FQ +G+     M +A  TSL  I 
Sbjct: 8   LTVILSLIGTGVFAGLLAGMLGVGGGIVIVPVLFFLFQALGVSPESAMVIATATSLATIV 67

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           PTSV S   H   G ++  +LK W   + I  +  S +++ V+ +FL   F I   L  I
Sbjct: 68  PTSVSSIRAHHAKGNVDFALLKAWAVFILIGVLAGSYLVTVVNPTFLTLLFGIIATLSAI 127

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            ML   +       P    + +     G  S  +G+GGG  T   + F     +KA  T+
Sbjct: 128 NMLIGKKDALFNGLPGRVGQSVMASCIGLFSSMVGIGGGTLTVPTLTFCNYPAHKAVGTA 187

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A V  +I+ PA L  ++ G      P  + G+VN+     I+P+++L  P+   ++  + 
Sbjct: 188 AAVGLIISLPAALTLLFVGATPADAPFATYGYVNLLGFACIVPLTVLFAPIGAGIANKLD 247

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              L   F++++  T    
Sbjct: 248 AGLLKKIFAVVLIITGLRM 266



 Score = 43.1 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 20/127 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V +   G  S + G+GGG + VP L+          +   H A+GT+  V    S+ + +
Sbjct: 149 VMASCIGLFSSMVGIGGGTLTVPTLTFC--------NYPAHKAVGTAAAVGLIISLPAAL 200

Query: 88  E------------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                           +G +N+      + +  +   + + + + +D   L K FA+  +
Sbjct: 201 TLLFVGATPADAPFATYGYVNLLGFACIVPLTVLFAPIGAGIANKLDAGLLKKIFAVVLI 260

Query: 136 LMGILML 142
           + G+ ML
Sbjct: 261 ITGLRML 267


>gi|114798514|ref|YP_760324.1| hypothetical protein HNE_1616 [Hyphomonas neptunium ATCC 15444]
 gi|114738688|gb|ABI76813.1| putative membrane protein [Hyphomonas neptunium ATCC 15444]
          Length = 281

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/264 (31%), Positives = 132/264 (50%), Gaps = 4/264 (1%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            VV  I +++VA  ++G ++GLFG+GGG V+VP L   F+  G+      H+A+G+SL  
Sbjct: 10  QVVQLISVLLVAGLIAGFVAGLFGIGGGFVVVPALLLVFEFFGVAPQTTTHIAIGSSLAT 69

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I  TS  S   H RHG ++ K+L+DW   L +      L+ S +D   +   F+    LM
Sbjct: 70  IIVTSARSLQAHTRHGAVDYKVLRDWTPWLMLGAFFGILLASFMDGQAMKWIFSGGVFLM 129

Query: 138 GILML---KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
           G+  +    + +    R  P + ++       G  S  LG+GGG    L+M   G SI++
Sbjct: 130 GLHFIWPVLQPKEAVARDMPGSMIRGGIATFLGAFSALLGIGGGTIAVLVMTSCGRSIHQ 189

Query: 195 ATATSAGVSALIAFPALLVRIYSGW-GLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           A AT+AG   +IA P  L     G    + LP  S G++N+ AV  I  +S +  P   K
Sbjct: 190 AVATAAGFGIVIALPGALGFAILGIVSHDELPFGSFGYINLLAVGAISAMSFITAPAGAK 249

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           L++ +    L   F + +  TS +
Sbjct: 250 LAHKLNGPILKKVFGIYLVATSAI 273


>gi|187478637|ref|YP_786661.1| membrane protein [Bordetella avium 197N]
 gi|115423223|emb|CAJ49754.1| putative membrane protein [Bordetella avium 197N]
          Length = 267

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 1/231 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L+  F   G+   + +HVA+ TS+  I  TS+ S   H++ GTIN KI+      + 
Sbjct: 27  VPFLTMLFTWQGMPGDLVVHVAIATSMTSILFTSLSSMHAHQKKGTINWKIVMTMAPGII 86

Query: 109 ITTVV-TSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
           +  ++    + + +  ++L+  FA+F    G  ML+  +    R+ P        G V G
Sbjct: 87  VGGLLSGGAVFAAISTAWLSLFFAVFVAYSGWNMLRSKKPKPSRQMPGVAGTSAVGAVIG 146

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           F SG +G GGG  +   M++   +++ A ATSA +   IA    +  ++SG   N   P 
Sbjct: 147 FASGLVGAGGGFLSVPFMVWCNVALHSAVATSAALGFPIALANSIGYVFSGLAENVDQPG 206

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            LGF+    +L ++  S+L  P+  +++Y +    L   F+ ++F  +   
Sbjct: 207 MLGFIYWPGLLALICTSVLTAPMGARMAYRLPVATLKKVFAGLLFLLAAYM 257



 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
               + G  SGL G GGG + VP +           ++ +H A+ TS  +  P ++ + +
Sbjct: 140 AVGAVIGFASGLVGAGGGFLSVPFMVWC--------NVALHSAVATSAALGFPIALANSI 191

Query: 88  EHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            +   G             I    L   I    +T  + + M   +  + L K FA    
Sbjct: 192 GYVFSGLAENVDQPGMLGFIYWPGLLALICTSVLTAPMGARMAYRLPVATLKKVFAGLLF 251

Query: 136 LMGILMLKR 144
           L+   ML +
Sbjct: 252 LLAAYMLSK 260


>gi|225024689|ref|ZP_03713881.1| hypothetical protein EIKCOROL_01571 [Eikenella corrodens ATCC
           23834]
 gi|224942578|gb|EEG23787.1| hypothetical protein EIKCOROL_01571 [Eikenella corrodens ATCC
           23834]
          Length = 270

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 108/232 (46%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V VP++  +    GI      H+A+GTS+ V+  T+  S    ++ G +  + ++     
Sbjct: 31  VTVPIVLWSLGRQGITGEHGQHLAVGTSMAVMVFTTFSSAWAQQKKGAVRWEFVRRMAPG 90

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           L   +++ SL+ + +    L   F +FC  +    L +         P   ++   G + 
Sbjct: 91  LVAGSLLGSLVSNRIPTFGLQVLFIVFCYSVAAKNLFQLNPKPAATLPSGRMQAGIGGLF 150

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G LS  +G+GGG  +   M++    +++A ATS+ ++  IA    L  ++SGW + GLP 
Sbjct: 151 GLLSSWVGIGGGSLSVPFMMYCRVPVHQAVATSSVLAWPIAVSGALGYLFSGWNVPGLPA 210

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            ++GF  +  ++++   ++L  PL  K ++ +    L   F ++M       
Sbjct: 211 GAVGFWYVPCIVVLGACTVLFAPLGVKAAHRLPPAGLKRAFGVLMVVIGSQM 262



 Score = 39.3 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 48/127 (37%), Gaps = 20/127 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             L G LS   G+GGG + VP +            + +H A+ TS  +  P +V   + +
Sbjct: 147 GGLFGLLSSWVGIGGGSLSVPFMMYC--------RVPVHQAVATSSVLAWPIAVSGALGY 198

Query: 90  RRHG---------TINMKILKDWIFVLPITTV---VTSLMISHVDKSFLNKAFAIFCLLM 137
              G          +    +   + +   T +   +       +  + L +AF +  +++
Sbjct: 199 LFSGWNVPGLPAGAVGFWYVPCIVVLGACTVLFAPLGVKAAHRLPPAGLKRAFGVLMVVI 258

Query: 138 GILMLKR 144
           G  ML +
Sbjct: 259 GSQMLWK 265


>gi|304312465|ref|YP_003812063.1| hypothetical protein HDN1F_28370 [gamma proteobacterium HdN1]
 gi|301798198|emb|CBL46420.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 263

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 99/225 (44%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
             AF   GI +++  H+A+GTSL  I  TS+ S  +H R   +   +       L I  V
Sbjct: 35  IFAFHWQGISENVLTHMAIGTSLATILMTSLGSIRQHHRAHAVRWSVAGTLSIGLVIGAV 94

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGA 172
           + +     +    +   FAIF L +   ML   +    R+ P        G V GF S  
Sbjct: 95  MGAWFADSLKGRVIQILFAIFALFVAAKMLFGSKPQASRQLPSISGMVGAGGVIGFASAI 154

Query: 173 LGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
            G+GGG  T   +++    + +A  TSA     IA       +++GW    LPP+S G++
Sbjct: 155 FGIGGGSLTVPFLVWCNLRMQEAVGTSAACGFPIALAGASAFVWTGWMAADLPPYSFGYL 214

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + A++ I   S+    +  ++++ +    L   F++++   S  
Sbjct: 215 YLPALVGIAITSVPFAQVGARMAHRLPAATLKKVFAVLLVAASLK 259



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 48/137 (35%), Gaps = 20/137 (14%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I  ++ A  + G  S +FG+GGG + VP L           ++ M  A+GTS     
Sbjct: 135 LPSISGMVGAGGVIGFASAIFGIGGGSLTVPFLVWC--------NLRMQEAVGTSAACGF 186

Query: 80  PTSVMSFMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           P ++                     G + +  L            V + M   +  + L 
Sbjct: 187 PIALAGASAFVWTGWMAADLPPYSFGYLYLPALVGIAITSVPFAQVGARMAHRLPAATLK 246

Query: 128 KAFAIFCLLMGILMLKR 144
           K FA+  +   + +L  
Sbjct: 247 KVFAVLLVAASLKLLIG 263


>gi|83952337|ref|ZP_00961068.1| membrane protein [Roseovarius nubinhibens ISM]
 gi|83836010|gb|EAP75308.1| membrane protein [Roseovarius nubinhibens ISM]
          Length = 274

 Score =  202 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 68/230 (29%), Positives = 114/230 (49%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AFQ +G D    M + + TSL  I  TSV S + H + G ++  IL+ W   + I
Sbjct: 38  PAFYYAFQTLGYDGPQLMQMCLATSLATIIVTSVRSVLSHNKKGAVDWDILRGWAPGIVI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             ++   + S +  + L   F I  + +G+ M L R       + P    + I   + GF
Sbjct: 98  GALIGVWVASGLRSATLTGIFGILGITVGLYMGLGRAHWRLAPEMPQGVTRMILSPILGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  YG  I++A AT+AG   LIA P++L  +         PP++
Sbjct: 158 LSVLMGIGGGSFGVPLMSLYGRPIHRAVATAAGFGILIAVPSVLGFLLLEIDPAHRPPFT 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           LG VN+ A ++++ ++++  P   KL++ +  K L   F++ +   +   
Sbjct: 218 LGAVNLVAFVVVIAMTLITAPWGVKLAHAMDPKPLKRVFAVFLTLVALNM 267



 Score = 41.6 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 12/127 (9%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM-- 84
           ++ S + G LS L G+GGG   VP       L G      +  A G  + +  P+ +   
Sbjct: 149 MILSPILGFLSVLMGIGGGSFGVP----LMSLYGRPIHRAVATAAGFGILIAVPSVLGFL 204

Query: 85  ------SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                 +       G +N+      I +  IT      +   +D   L + FA+F  L+ 
Sbjct: 205 LLEIDPAHRPPFTLGAVNLVAFVVVIAMTLITAPWGVKLAHAMDPKPLKRVFAVFLTLVA 264

Query: 139 ILMLKRD 145
           + ML++ 
Sbjct: 265 LNMLRKS 271


>gi|315179251|gb|ADT86165.1| predicted permease [Vibrio furnissii NCTC 11218]
          Length = 264

 Score =  202 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 107/229 (46%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L     L GI   I M +A+ TSL  I  TS  S + H + G ++M ++K  +  + +
Sbjct: 33  PALLFLLPLSGISPDIVMQLALATSLATIIVTSGSSALNHLKLGNVDMFVVKWLLPGVLV 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
              + S++   +   +L K F    L++ + M +  R+      P   +  ++G   G +
Sbjct: 93  GGFLGSVIAEWIPNHYLPKVFGAIVLVLALQMYRSIRVTHTWPMPGAMMTALYGSGIGVV 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S   G+GGG  +   +  +G  + KA  +S+    +IA   +L  I  G+   GLP +S+
Sbjct: 153 SSLAGIGGGSLSVPFLNHHGVEMRKAVGSSSVCGFMIAISGMLGFILHGYQAEGLPQYSV 212

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V + A++ I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 213 GYVYLPALVAIASTSMLTTRIGAKLATQLPTTVLKRFFAVFLMFVAVTM 261



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 20/125 (16%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME- 88
               G +S L G+GGG + VP L+           + M  A+G+S       ++   +  
Sbjct: 146 GSGIGVVSSLAGIGGGSLSVPFLNH--------HGVEMRKAVGSSSVCGFMIAISGMLGF 197

Query: 89  -----------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G + +  L        +TT + + + + +  + L + FA+F + +
Sbjct: 198 ILHGYQAEGLPQYSVGYVYLPALVAIASTSMLTTRIGAKLATQLPTTVLKRFFAVFLMFV 257

Query: 138 GILML 142
            + ML
Sbjct: 258 AVTML 262


>gi|86147414|ref|ZP_01065727.1| hypothetical protein MED222_01127 [Vibrio sp. MED222]
 gi|85834842|gb|EAQ52987.1| hypothetical protein MED222_01127 [Vibrio sp. MED222]
          Length = 263

 Score =  202 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 105/229 (45%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       GI     M +A+ TSL  I  TS  S + H + G + + ++K  I  + I
Sbjct: 33  PALLFLLPKAGIPQEFAMQMALATSLSTIIVTSGSSAINHLKLGNVEIFVVKWLIPGVVI 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
              + S +   +   +L K F +  L++ + ML   R   ++  P +    + G   G +
Sbjct: 93  GGFLGSFVADVIPAQYLPKVFGVIVLVLALQMLLSIRSKNQKSMPGSAKTVLCGGGIGLV 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S   G+GGG  +   +  +G  + KA  +S+    +IA   +L  I+ G  ++ LP +SL
Sbjct: 153 SSLAGIGGGSLSVPFLNHHGVEMRKAVGSSSVCGCVIAISGMLGFIWHGSSVDDLPAYSL 212

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V + A++ I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 213 GYVYLPALIAISCTSVLTTRVGAKLATQLPTSVLKKFFAVFLMFIAATM 261



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 49/129 (37%), Gaps = 20/129 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G +S L G+GGG + VP L+           + M  A+G+S       ++   
Sbjct: 143 VLCGGGIGLVSSLAGIGGGSLSVPFLNH--------HGVEMRKAVGSSSVCGCVIAISGM 194

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G + +  L        +TT V + + + +  S L K FA+F 
Sbjct: 195 LGFIWHGSSVDDLPAYSLGYVYLPALIAISCTSVLTTRVGAKLATQLPTSVLKKFFAVFL 254

Query: 135 LLMGILMLK 143
           + +   ML 
Sbjct: 255 MFIAATMLL 263


>gi|268679507|ref|YP_003303938.1| hypothetical protein Sdel_0872 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268617538|gb|ACZ11903.1| protein of unknown function DUF81 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 267

 Score =  202 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 67/260 (25%), Positives = 121/260 (46%), Gaps = 1/260 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V+++   +V   + G ++GL G+GGG +MVPVL+  F   GI     +H+A+GTS+  I 
Sbjct: 3   VEWVIAFLVLGCVVGFMAGLLGIGGGGIMVPVLTSIFLAQGIPVEQVVHMALGTSMASIV 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  S   H + G +   ++K     + + T   + + + +  S L   FA+F   + I
Sbjct: 63  ITSFSSMRAHHQKGAVLWNVVKMMAGGVVLGTFAATFLAASMKSSHLALFFALFMAYVSI 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M    +    R        +  G   G +S  + +GGG  T   +++    + KA ATS
Sbjct: 123 QMALDKKPKPTRSLSTPPYLFGAGSFIGIISALVSIGGGSLTVPYLVWQNVDLKKAIATS 182

Query: 200 AGVSALIAFPALLVRIYSG-WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           A +   ++    +  I +G +  +       GFV + AV++I  +S    PL  K+++ +
Sbjct: 183 AAIGFPLSIAGTVGYIVNGMFQGSHGVEMMAGFVYLPAVILISLMSYFTAPLGAKMAHRL 242

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++++   SF  
Sbjct: 243 PVGKLKKIFALLLMILSFKM 262



 Score = 43.9 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 21/131 (16%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +  A    G +S L  +GGG + VP L           ++ +  A+ TS  +  P S+ 
Sbjct: 141 YLFGAGSFIGIISALVSIGGGSLTVPYLVW--------QNVDLKKAIATSAAIGFPLSIA 192

Query: 85  SFMEHRRHGT-------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
             + +  +G              + +  +     +   T  + + M   +    L K FA
Sbjct: 193 GTVGYIVNGMFQGSHGVEMMAGFVYLPAVILISLMSYFTAPLGAKMAHRLPVGKLKKIFA 252

Query: 132 IFCLLMGILML 142
           +  +++   ML
Sbjct: 253 LLLMILSFKML 263


>gi|260771791|ref|ZP_05880709.1| hypothetical protein VIB_000229 [Vibrio metschnikovii CIP 69.14]
 gi|260613083|gb|EEX38284.1| hypothetical protein VIB_000229 [Vibrio metschnikovii CIP 69.14]
          Length = 265

 Score =  202 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L      MGI+  I MH+A+ TSL  I  TS+ S + H + G I++ ++K  +  +  
Sbjct: 33  PALLFLLPKMGINPEIVMHIALATSLATIIITSISSALNHLKLGNIDLFVVKWLLPGVLT 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGF 168
              + S++   +   +L K F +  L + + M++   +    R  P   V  + G   G 
Sbjct: 93  GGFLGSVVAEWIPSHYLPKVFGVIVLALALQMVRSSMQARSTRPMPGAIVTLLSGNGIGI 152

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S   G+GGG  T   +  +G  + KA  +SA    +IA   +L  I  G+ +  LP +S
Sbjct: 153 ISTLAGIGGGSLTVPFLNHHGVEMRKAVGSSAVCGLVIAISGMLGFILHGYRVENLPEYS 212

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           LG+V + A+L I   SIL T +  KL+  +    L   F+  +   +   
Sbjct: 213 LGYVYLPALLAIASTSILTTRIGAKLASRLPTVTLKRFFAFFLMLVAITM 262



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 20/133 (15%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            + +++    G +S L G+GGG + VP L+           + M  A+G+S       ++
Sbjct: 141 IVTLLSGNGIGIISTLAGIGGGSLTVPFLNH--------HGVEMRKAVGSSAVCGLVIAI 192

Query: 84  MSFMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
              +                 G + +  L        +TT + + + S +    L + FA
Sbjct: 193 SGMLGFILHGYRVENLPEYSLGYVYLPALLAIASTSILTTRIGAKLASRLPTVTLKRFFA 252

Query: 132 IFCLLMGILMLKR 144
            F +L+ I ML +
Sbjct: 253 FFLMLVAITMLLQ 265


>gi|52424462|ref|YP_087599.1| hypothetical protein MS0407 [Mannheimia succiniciproducens MBEL55E]
 gi|52306514|gb|AAU37014.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 266

 Score =  202 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 3/263 (1%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++ +  + ++   + G L+G+FG+GGGLV+VP L     ++G+ D   M  A+GTS   I
Sbjct: 1   MLTFFIITLIVGSIVGFLAGIFGIGGGLVIVPTLLYLLPMVGVPDEKLMATALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS+ S   H + G +  + +K     L I T ++ L I  + K   +K FA   + + 
Sbjct: 61  IITSLASAYRHNKLGNVVWEAVKYLAPTLVIATFISGLFIGKLPKDISSKLFACLVVYLA 120

Query: 139 ILM---LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
             M   ++  +     K        + G++ G  S A G+GGG F    +   G  + K+
Sbjct: 121 AKMVLSIRNKKSKTPAKPLTPQSTILGGILIGIASSAAGIGGGSFIVPFLNSRGIEMRKS 180

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             +S+   A +    +L  +  GW + G+P WSLG++ + AVL I   S   +    +++
Sbjct: 181 VGSSSFCGAFLGLAGMLSFMIGGWSVEGMPDWSLGYIYLPAVLGITLTSFFTSKFGAEMA 240

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
             +    L   F++ +   +   
Sbjct: 241 NKLPVASLKRYFAIFLILMAIKM 263



 Score = 43.5 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 48/130 (36%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+   L G  S   G+GGG  +VP L+           I M  ++G+S    A   +   
Sbjct: 145 ILGGILIGIASSAAGIGGGSFIVPFLN--------SRGIEMRKSVGSSSFCGAFLGLAGM 196

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G I +  +         T+   + M + +  + L + FAIF 
Sbjct: 197 LSFMIGGWSVEGMPDWSLGYIYLPAVLGITLTSFFTSKFGAEMANKLPVASLKRYFAIFL 256

Query: 135 LLMGILMLKR 144
           +LM I ML  
Sbjct: 257 ILMAIKMLIG 266


>gi|307824887|ref|ZP_07655109.1| protein of unknown function DUF81 [Methylobacter tundripaludum
           SV96]
 gi|307733934|gb|EFO04789.1| protein of unknown function DUF81 [Methylobacter tundripaludum
           SV96]
          Length = 263

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 65/259 (25%), Positives = 124/259 (47%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++      ++   +SG ++GLFG+GGGL++VPVL+  F   G    + M +++ TSL  I
Sbjct: 1   MIAIFLASLLLGTVSGLMAGLFGIGGGLIIVPVLAVLFAGQGFPTELVMIMSVATSLATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS+ S + H R  ++    +      + I   V +++  H+    L   F I+ L +G
Sbjct: 61  IFTSISSVLAHHRLNSVLWDKVLAMGPGIMIGAAVGAVVADHIAGDVLRFIFIIYLLSVG 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           + M  + +    ++ P   + +    + G LS  LG+GGG  T   ++ +   +  A A 
Sbjct: 121 VQMALQFKPKPGQQQPSKELDFGVAGIMGLLSSLLGIGGGTLTVPFLVHFQTPMRNAVAI 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           ++     +A    +     G   + LP WSLG++ + + L I+  S    P+  KL++ +
Sbjct: 181 ASACGLPLALVGTVGYALLGKDASQLPEWSLGYIYVPSFLGIVLTSTYTAPIGAKLAHKL 240

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             + L   FS+++F  +  
Sbjct: 241 PAEKLKRYFSLLLFVMAAK 259



 Score = 38.5 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 43/126 (34%), Gaps = 20/126 (15%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
            + + G LS L G+GGG + VP L              M  A+  +     P +++  + 
Sbjct: 144 VAGIMGLLSSLLGIGGGTLTVPFLVHF--------QTPMRNAVAIASACGLPLALVGTVG 195

Query: 89  H------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           +               G I +      +     T  + + +   +    L + F++   +
Sbjct: 196 YALLGKDASQLPEWSLGYIYVPSFLGIVLTSTYTAPIGAKLAHKLPAEKLKRYFSLLLFV 255

Query: 137 MGILML 142
           M   ++
Sbjct: 256 MAAKLI 261


>gi|167623003|ref|YP_001673297.1| hypothetical protein Shal_1069 [Shewanella halifaxensis HAW-EB4]
 gi|167353025|gb|ABZ75638.1| protein of unknown function DUF81 [Shewanella halifaxensis HAW-EB4]
          Length = 266

 Score =  201 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 115/261 (44%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  +  +C+ ++   + G ++GL G+GGGL+ VP L       GI      HVA+ TSL 
Sbjct: 2   ESWLYILCICLILGAVIGFMAGLLGIGGGLIAVPALLHILPQAGITSDNLPHVAIATSLA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I  TS+ S   H +   I   +LK  +    +  + +  +   +    L + FA+F +L
Sbjct: 62  AIILTSLSSARAHHKRENIPWSLLKPMLPGFVLGALCSGFISEMIAAKSLQQIFAVFVIL 121

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           M + M    +       P     +    +   ++  +G+GGG+     + + G  +  A 
Sbjct: 122 MAVQMAYPFKAEPNHNMPGQMSLFFAATIIAVIAALMGIGGGVLLVPFLTWCGLQMRFAV 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S+    LIA    +    +GW    LP W+LG++ + A++ I+  S+L+ PL  + + 
Sbjct: 182 GFSSATGLLIASFGSIGYTLAGWNAPSLPDWTLGYIYLPALIGIVSTSMLMAPLGARAAT 241

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            +    L   F++ +      
Sbjct: 242 TLPTAKLKKVFAIFLALVGLK 262



 Score = 40.1 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 12/113 (10%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME--------HR 90
           L G+GGG+++VP L+      G+     +  +  T L + +  S+   +           
Sbjct: 157 LMGIGGGVLLVPFLTWC----GLQMRFAVGFSSATGLLIASFGSIGYTLAGWNAPSLPDW 212

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
             G I +  L   +    +   + +   + +  + L K FAIF  L+G+ ++ 
Sbjct: 213 TLGYIYLPALIGIVSTSMLMAPLGARAATTLPTAKLKKVFAIFLALVGLKLVL 265


>gi|209883443|ref|YP_002287300.1| membrane protein [Oligotropha carboxidovorans OM5]
 gi|209871639|gb|ACI91435.1| membrane protein [Oligotropha carboxidovorans OM5]
          Length = 284

 Score =  201 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 82/277 (29%), Positives = 157/277 (56%), Gaps = 9/277 (3%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  L+   +++ + L+++   ++G  +GLFG+GGG V+VPVL + F++ G+     M + 
Sbjct: 1   MAALNMGELIELVALLLLVGAIAGFFAGLFGIGGGAVLVPVLYECFRVAGVPLEARMPLC 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL +I PT++ S+  H   G+++ ++L+ W   + +  +  SL+  +  +      F
Sbjct: 61  IGTSLAIIIPTAIRSYRSHLARGSVDREVLRRWAIPILVGVIGGSLIARYAPERVFKYVF 120

Query: 131 AIFCLLMGILMLK-RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            +        +L  +D        P N +  I+G + G LS  +G+GGG+F+NLLM FYG
Sbjct: 121 VVVAWSAAARLLFGKDTWRFGNDLPKNPLMAIYGFIVGLLSTLMGIGGGVFSNLLMTFYG 180

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP--------PWSLGFVNIGAVLIIL 241
             I+++ ATSAG++ LI+ P  +  +Y+GW ++           P++LG+V++   L+++
Sbjct: 181 RPIHQSIATSAGLAVLISLPGAIGYVYAGWPVHERFPDVLALQMPFALGYVSVIGALLVI 240

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           P S+L+ P   ++++ + K+ L I F++ + T    F
Sbjct: 241 PASLLVAPFGVRVAHAMSKRALEISFAIYLLTMGARF 277


>gi|171061009|ref|YP_001793358.1| hypothetical protein Lcho_4342 [Leptothrix cholodnii SP-6]
 gi|170778454|gb|ACB36593.1| protein of unknown function DUF81 [Leptothrix cholodnii SP-6]
          Length = 274

 Score =  201 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 123/265 (46%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           ++   ++ +I   +    + G  +GL G+GGG++ VP+L+  F+L     +  +H+A+GT
Sbjct: 1   MNLVDLLPWIGAYLALGCVGGFAAGLLGIGGGMLYVPLLAWLFELQHFAPASMLHLALGT 60

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           SL  I  TS+ S   H   G ++  I++  +  + I  ++   +   +  + L   FA+F
Sbjct: 61  SLTTIIFTSISSLRAHHAKGNVDWTIVRQIVPGIAIGGLIGGALAKQLPTATLALIFAVF 120

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
                  M    +    R  P        G++   LS  +G GGG  +   M +   +I+
Sbjct: 121 VSYSATQMFLNAKPKPSRSLPGAAGVAGVGVLISTLSQLVGAGGGFLSVPFMTWCNVTIH 180

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +A  TSA +   IA    +V    G    GLPP S G++ + A+L +L  S+L+ P+  +
Sbjct: 181 RAVGTSAAIGLPIAIVGTVVYFLGGQSSTGLPPGSFGYIYLPALLAVLVPSVLMAPVGAR 240

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVF 278
           L+  +    L   F+  +F  +   
Sbjct: 241 LASTLPVATLKRVFAGFLFVLALKM 265



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 20/123 (16%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L  TLS L G GGG + VP ++          ++ +H A+GTS  +  P +++  + +  
Sbjct: 152 LISTLSQLVGAGGGFLSVPFMTWC--------NVTIHRAVGTSAAIGLPIAIVGTVVYFL 203

Query: 92  HGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            G             I +  L   +    +   V + + S +  + L + FA F  ++ +
Sbjct: 204 GGQSSTGLPPGSFGYIYLPALLAVLVPSVLMAPVGARLASTLPVATLKRVFAGFLFVLAL 263

Query: 140 LML 142
            ML
Sbjct: 264 KML 266


>gi|194290538|ref|YP_002006445.1| membrane lipoprotein, cog0477/duf81 [Cupriavidus taiwanensis LMG
           19424]
 gi|193224373|emb|CAQ70384.1| putative membrane lipoprotein, COG0477/DUF81 [Cupriavidus
           taiwanensis LMG 19424]
          Length = 274

 Score =  201 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 1/266 (0%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  D +   I  ++     +G  +GL GVGGG++MVP L+  F  +G      +H+A+ T
Sbjct: 1   MPFDNLPVLIPALLALGAFTGFCAGLLGVGGGMMMVPFLTLLFTSLGFAGEAIVHMAIAT 60

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL-MISHVDKSFLNKAFAI 132
           S+G I  TS+ S   H + G +   I+      + I  +V    + + +  S+L+ AFA 
Sbjct: 61  SMGTILFTSLSSVRAHHKRGAVRWPIVLALAPGIVIGGMVGGGKVFAALKTSWLSLAFAG 120

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           F     + ML+  R    R+ P        G V GFLS  +G GG   +   M +    I
Sbjct: 121 FVGFSALQMLRNRRPRPGRQLPGFAGMAGAGGVIGFLSSLVGAGGAFVSVPFMTWCNVPI 180

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           + A ATSA +   IA  ++   I+SGW   GLP  SLG++ + A+L+I   S+L  PL  
Sbjct: 181 HNAVATSAALGFPIAAASVAGYIWSGWHAPGLPAGSLGYLYLPALLVIAAASVLTAPLGA 240

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVF 278
           + ++ +    L   F++++   +   
Sbjct: 241 RTAHRMDVGQLRKVFAVLLLCLATYM 266



 Score = 45.4 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 20/122 (16%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR---- 90
            LS L G GG  V VP ++          ++ +H A+ TS  +  P +  S   +     
Sbjct: 156 FLSSLVGAGGAFVSVPFMTWC--------NVPIHNAVATSAALGFPIAAASVAGYIWSGW 207

Query: 91  --------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                     G + +  L        +T  + +     +D   L K FA+  L +   ML
Sbjct: 208 HAPGLPAGSLGYLYLPALLVIAAASVLTAPLGARTAHRMDVGQLRKVFAVLLLCLATYML 267

Query: 143 KR 144
            +
Sbjct: 268 WK 269


>gi|82701746|ref|YP_411312.1| hypothetical protein Nmul_A0613 [Nitrosospira multiformis ATCC
           25196]
 gi|82409811|gb|ABB73920.1| Protein of unknown function DUF81 [Nitrosospira multiformis ATCC
           25196]
          Length = 265

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 1/260 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +++    ++   + G  +GL G+GGGLV+VPVL+  F          +H+A+GT++  I 
Sbjct: 1   MEWWPAYLILGTVVGFFAGLLGIGGGLVIVPVLTFIFTAQDFPPDRILHLALGTTMAAII 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S  S   H  HG +N +++K     + + T+  + ++S +   FL+  F +F      
Sbjct: 61  FSSAASLRTHHVHGAVNWQVVKFITPGIILGTLGGATVVSMLSSRFLSIVFVVFIYYAAT 120

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            ML   R    R  P        G V G +S  + +GGG+ T   +      +  A  T+
Sbjct: 121 QMLLNIRPKPSRTLPGRLGMLAAGSVIGAISSFVAIGGGLLTIPFLSLCNVKLQHAIGTA 180

Query: 200 AGVSALIAFPALLVRIYSGWGLNG-LPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           A V   IA    +  + +G      LP +SLG+V + A+  I+  S L  PL  K ++++
Sbjct: 181 AAVGFPIAVAGGIGYMINGMAQPQPLPEYSLGYVYLPALGWIVLGSTLTAPLGAKTTHVM 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F ++++      
Sbjct: 241 QTATLRKIFVVLLYLLGTRM 260



 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 52/132 (39%), Gaps = 21/132 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++ A  + G +S    +GGGL+ +P LS          ++ +  A+GT+  V  P +V  
Sbjct: 140 MLAAGSVIGAISSFVAIGGGLLTIPFLSLC--------NVKLQHAIGTAAAVGFPIAVAG 191

Query: 86  FMEH-------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            + +                G + +  L   +    +T  + +     +  + L K F +
Sbjct: 192 GIGYMINGMAQPQPLPEYSLGYVYLPALGWIVLGSTLTAPLGAKTTHVMQTATLRKIFVV 251

Query: 133 FCLLMGILMLKR 144
              L+G  ML R
Sbjct: 252 LLYLLGTRMLLR 263


>gi|154251506|ref|YP_001412330.1| hypothetical protein Plav_1051 [Parvibaculum lavamentivorans DS-1]
 gi|154155456|gb|ABS62673.1| protein of unknown function DUF81 [Parvibaculum lavamentivorans
           DS-1]
          Length = 277

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 77/230 (33%), Positives = 125/230 (54%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL + F L+GID+++ MH+A+GTSLG I  TS+ S   H + G ++  +LK+W   + +
Sbjct: 42  PVLYQVFTLLGIDEAVRMHLAVGTSLGTIILTSIRSVRAHAKKGAVDWDMLKNWALPILV 101

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
                +L+ ++V    L   FA   L++   +   ++      + P    +Y    V G 
Sbjct: 102 GVGCGTLIAAYVSGDVLTAVFATIALVVAANLAFGKESWRLGTELPGKPAQYSVAGVIGV 161

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F    M  YG +  +A ATS+G+  LIA PA++  +++GW    LPP+S
Sbjct: 162 LSALMGIGGGTFAVSFMTLYGKNPREAVATSSGLGVLIAVPAVVGFVWAGWNDPLLPPFS 221

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           LG+VN+  + +I P+S+L  P    L++ I  K L   F+  +  TS   
Sbjct: 222 LGYVNLIGMALIAPLSVLAAPWGAALAHAISPKALIRAFAFFLALTSLQM 271


>gi|269966618|ref|ZP_06180699.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269828803|gb|EEZ83056.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 263

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 107/219 (48%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           GI   + MH+A+ TSL  I  TS  S M H + G ++M ++K  +  + I   V + +  
Sbjct: 43  GISPEMSMHMALATSLASIIVTSGSSAMNHLKLGNVDMFVVKWLMPGVVIGGFVGANIAE 102

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +   +L K F +  L + + M +  ++   +  P + V  ++G   G +S   G+GGG 
Sbjct: 103 WIPTHYLPKVFGVIVLCLSVQMFRSIKVTSSKPMPSSPVTVVYGTGIGVVSSLAGIGGGS 162

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            +   +  +G  + KA  +S+    +IA   ++  I  G+ + GLP +S+G+V + A+L 
Sbjct: 163 LSVPFLNKHGIEMRKAVGSSSVCGCVIAISGMIGFILHGYKVEGLPSYSIGYVYLPALLA 222

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 223 IAMASMLTTKVGAKLATNLPTAVLKKIFAVFLMFVAATM 261



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 20/129 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL---GVIAPTSV 83
           +V     G +S L G+GGG + VP L+           I M  A+G+S     VIA + +
Sbjct: 143 VVYGTGIGVVSSLAGIGGGSLSVPFLN--------KHGIEMRKAVGSSSVCGCVIAISGM 194

Query: 84  MSFMEH---------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           + F+ H            G + +  L        +TT V + + +++  + L K FA+F 
Sbjct: 195 IGFILHGYKVEGLPSYSIGYVYLPALLAIAMASMLTTKVGAKLATNLPTAVLKKIFAVFL 254

Query: 135 LLMGILMLK 143
           + +   ML 
Sbjct: 255 MFVAATMLL 263


>gi|254230567|ref|ZP_04923933.1| permease [Vibrio sp. Ex25]
 gi|262395198|ref|YP_003287052.1| hypothetical protein VEA_004429 [Vibrio sp. Ex25]
 gi|151936913|gb|EDN55805.1| permease [Vibrio sp. Ex25]
 gi|262338792|gb|ACY52587.1| hypothetical protein VEA_004429 [Vibrio sp. Ex25]
          Length = 263

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 106/219 (48%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           GI   + MH+A+ TSL  I  TS  S M H + G ++M ++K  +  + I   V + +  
Sbjct: 43  GISPEMSMHMALATSLASIIVTSGSSAMNHLKLGNVDMFVVKWLMPGVVIGGFVGANIAE 102

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +   +L K F +  L + + M +  ++   +  P + V   +G   G +S   G+GGG 
Sbjct: 103 WIPTHYLPKVFGVIVLCLSVQMFRSIKVTSSKPMPSSPVTVAYGTGIGVVSSLAGIGGGS 162

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            +   +  +G  + KA  +S+    +IA   ++  I  G+ + GLP +S+G+V + A+L 
Sbjct: 163 LSVPFLNKHGIEMRKAVGSSSVCGCVIAISGMIGFILHGYKVEGLPSYSIGYVYLPALLA 222

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 223 IAMASMLTTKVGAKLATNLPTAVLKKIFAVFLMFVAATM 261



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 20/126 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL---GVIAPTSVMSF 86
               G +S L G+GGG + VP L+           I M  A+G+S     VIA + ++ F
Sbjct: 146 GTGIGVVSSLAGIGGGSLSVPFLN--------KHGIEMRKAVGSSSVCGCVIAISGMIGF 197

Query: 87  MEH---------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           + H            G + +  L        +TT V + + +++  + L K FA+F + +
Sbjct: 198 ILHGYKVEGLPSYSIGYVYLPALLAIAMASMLTTKVGAKLATNLPTAVLKKIFAVFLMFV 257

Query: 138 GILMLK 143
              ML 
Sbjct: 258 AATMLL 263


>gi|118593614|ref|ZP_01550991.1| hypothetical protein SIAM614_05471 [Stappia aggregata IAM 12614]
 gi|118433832|gb|EAV40492.1| hypothetical protein SIAM614_05471 [Stappia aggregata IAM 12614]
          Length = 275

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 82/269 (30%), Positives = 135/269 (50%), Gaps = 1/269 (0%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  LS   +      ++    ++G ++GL GVGGG+V+VPVL   F  + ID S+ MHVA
Sbjct: 1   MEDLSLFSLGLLAVALLATGLVAGIIAGLLGVGGGIVIVPVLYYMFTALKIDPSVLMHVA 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL  I  T   S   H   G+++M +LK W + + +  +    +  ++    L   F
Sbjct: 61  VGTSLATILATGTSSARAHYNRGSVDMDLLKRWWWAIALGVIAGGTLAGNISGGALTLVF 120

Query: 131 AIFCLLM-GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            I  L +   +M ++D  +   K P + +K   G + G +S  +G+GGG      +  + 
Sbjct: 121 GIVALAVSANMMFRKDGSHLADKLPGSPIKEALGFLIGGISVMMGIGGGTLGVPTLTLFN 180

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             I KA  T+A +  +IA P  L+ I+ G G  G PP+SLG+VN+    +I+P S    P
Sbjct: 181 YPIRKAVGTAAAIGLIIAVPGTLLSIFFGRGEEGRPPFSLGYVNLIGFFLIIPASTFAAP 240

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              K+++ I    L + F++ +  T    
Sbjct: 241 WGAKIAHAIDPSKLKLVFALFLGFTGLRM 269



 Score = 43.1 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 4/119 (3%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            FL G +S + G+GGG + VP L+       + +G   +I + +A+  +L  I       
Sbjct: 154 GFLIGGISVMMGIGGGTLGVPTLTLFNYPIRKAVGTAAAIGLIIAVPGTLLSIFFGRGEE 213

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                  G +N+      I          + +   +D S L   FA+F    G+ M+  
Sbjct: 214 GRPPFSLGYVNLIGFFLIIPASTFAAPWGAKIAHAIDPSKLKLVFALFLGFTGLRMIYG 272


>gi|171463863|ref|YP_001797976.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171193401|gb|ACB44362.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 272

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 1/231 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP +   F  +  D S+ +H+A+ T +  I  T+  +   H +HG+I+ K++      L 
Sbjct: 32  VPFMILVFNHLHFDQSVIVHMAIATGMATILFTTTSAIWAHHKHGSIDWKLVASLSPGLV 91

Query: 109 ITTVVTSL-MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
           I +++    +   ++ S+L+  FAIF +   I ML   +    R  PD    + +G   G
Sbjct: 92  IGSLIGGSEIFEALNTSWLSLFFAIFIVYTSIQMLLNKKPKPGRDLPDTLGLFGFGSFAG 151

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            LS  +G GG   T   ML+     + A A+S+G+   IA  A +  +Y  WG   LP  
Sbjct: 152 ALSSLVGAGGAFITVPFMLWCNVKPHIAMASSSGIGFPIAAAATVGYMYGSWGHPNLPSG 211

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           SLGFV + AV+ I  +SI       K++  +    L   F +++   +   
Sbjct: 212 SLGFVYLPAVVCIAAVSIFTASPGAKMARKLDVAQLKRIFGVMLLMLAAFM 262



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 20/133 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +      +G LS L G GG  + VP +           ++  H+AM +S G+  P +  +
Sbjct: 143 LFGFGSFAGALSSLVGAGGAFITVPFMLWC--------NVKPHIAMASSSGIGFPIAAAA 194

Query: 86  FMEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G + +  +     V   T    + M   +D + L + F + 
Sbjct: 195 TVGYMYGSWGHPNLPSGSLGFVYLPAVVCIAAVSIFTASPGAKMARKLDVAQLKRIFGVM 254

Query: 134 CLLMGILMLKRDR 146
            L++   M    R
Sbjct: 255 LLMLAAFMFNESR 267


>gi|88811005|ref|ZP_01126261.1| predicted Permease [Nitrococcus mobilis Nb-231]
 gi|88791544|gb|EAR22655.1| predicted Permease [Nitrococcus mobilis Nb-231]
          Length = 266

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 78/260 (30%), Positives = 123/260 (47%), Gaps = 1/260 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +      +     +G  SGLFG+GGGL++VP L   F    I +SI MH+A+G+SL  I 
Sbjct: 1   MHSYLFYLATGACAGLASGLFGIGGGLILVPALLFVFTAHDIPESIAMHLAVGSSLASIV 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  S   H   G++  ++ K     L I  ++ + +   +    L + FA+F L+   
Sbjct: 61  ATSASSVSAHAFFGSVLWRVFKPIAIGLLIGALLGAQIAGLLSGLILKRIFAVFMLITAA 120

Query: 140 LM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
            M   R  L   R+ P  Y     G++ G +S  +G+GGG      + + G  + +A  T
Sbjct: 121 QMAFARQPLASSRRLPGKYGLVGAGLIIGSVSSLVGIGGGSLMVPYLSWCGTQMRQAVGT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           SA     IA       I +GW    LP  + GFV   AV  I+  SIL+ P+  +L++++
Sbjct: 181 SAAAGFPIAIAGTTGFILAGWSEPILPSATTGFVYWPAVGGIVVASILVAPIGARLAHLL 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
             K L   F++ +   S  F
Sbjct: 241 PAKVLKRIFAVFLLVVSAQF 260



 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++ A  + G++S L G+GGG +MVP LS             M  A+GTS     P ++  
Sbjct: 141 LVGAGLIIGSVSSLVGIGGGSLMVPYLSWC--------GTQMRQAVGTSAAAGFPIAIAG 192

Query: 86  FMEHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
                  G             +    +   +    +   + + +   +    L + FA+F
Sbjct: 193 TTGFILAGWSEPILPSATTGFVYWPAVGGIVVASILVAPIGARLAHLLPAKVLKRIFAVF 252

Query: 134 CLLMGILML 142
            L++     
Sbjct: 253 LLVVSAQFF 261


>gi|260771143|ref|ZP_05880070.1| hypothetical protein VFA_004208 [Vibrio furnissii CIP 102972]
 gi|260613740|gb|EEX38932.1| hypothetical protein VFA_004208 [Vibrio furnissii CIP 102972]
          Length = 259

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 107/229 (46%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L     L GI   I M +A+ TSL  I  TS  S + H + G ++M ++K  +  + +
Sbjct: 28  PALLFLLPLSGISPDIVMQLALATSLATIIVTSGSSALNHLKLGNVDMFVVKWLLPGVLV 87

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
              + S++   +   +L K F    L++ + M +  R+      P   +  ++G   G +
Sbjct: 88  GGFLGSVIAEWIPNHYLPKVFGAIVLVLALQMYRSIRVTHTWPMPGAMMTALYGSGIGVV 147

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S   G+GGG  +   +  +G  + KA  +S+    +IA   +L  I  G+   GLP +S+
Sbjct: 148 SSLAGIGGGSLSVPFLNHHGVEMRKAVGSSSVCGFMIAISGMLGFILHGYQAEGLPQYSV 207

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V + A++ I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 208 GYVYLPALVAIASTSMLTTRIGAKLATQLPTTVLKRFFAVFLMFVAVTM 256



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 20/125 (16%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME- 88
               G +S L G+GGG + VP L+           + M  A+G+S       ++   +  
Sbjct: 141 GSGIGVVSSLAGIGGGSLSVPFLNH--------HGVEMRKAVGSSSVCGFMIAISGMLGF 192

Query: 89  -----------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G + +  L        +TT + + + + +  + L + FA+F + +
Sbjct: 193 ILHGYQAEGLPQYSVGYVYLPALVAIASTSMLTTRIGAKLATQLPTTVLKRFFAVFLMFV 252

Query: 138 GILML 142
            + ML
Sbjct: 253 AVTML 257


>gi|161831015|ref|YP_001595920.1| hypothetical protein COXBURSA331_A0020 [Coxiella burnetii RSA 331]
 gi|161762882|gb|ABX78524.1| putative membrane protein [Coxiella burnetii RSA 331]
          Length = 275

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 76/260 (29%), Positives = 128/260 (49%), Gaps = 1/260 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  L++    ++G L  LFGVGGG+V+VPV    F    +     MH A+GTSL ++ 
Sbjct: 8   IYFALLLLFVGGIAGYLGSLFGVGGGIVLVPVFLTIFPFFHVSHEAVMHNAVGTSLALLV 67

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           P +++S   H + G  +  +LK WI  + I  +   L+I  +  ++L   FA++     +
Sbjct: 68  PNALLSARNHYKRGNFDFPLLKQWIPFILIGAITGILIIKFIPTAYLKILFALYLYASFL 127

Query: 140 L-MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             +LK+ +     + P  +   I G++ G  S  LG+GGG F+      Y  SI K+ A 
Sbjct: 128 YVILKKGKGNEIEEQPRGWGMRIAGVLIGGFSVLLGMGGGTFSIPFCQAYNYSIKKSIAL 187

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           ++  +  I     +  I SGW   G  P+SL FVN+ A + ILP  I+ +P   K +  +
Sbjct: 188 ASATAIFIGLIGTIGVIISGWNAPGRAPYSLRFVNLLAFICILPTIIIFSPFGVKTAQRL 247

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
             + L I ++  + T     
Sbjct: 248 SLRQLRILYAFFLLTMGLYM 267


>gi|91227680|ref|ZP_01261957.1| hypothetical protein V12G01_13384 [Vibrio alginolyticus 12G01]
 gi|91188459|gb|EAS74753.1| hypothetical protein V12G01_13384 [Vibrio alginolyticus 12G01]
          Length = 263

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 107/219 (48%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           GI   + MH+A+ TSL  I  TS  S M H + G ++M ++K  +  + I   V + +  
Sbjct: 43  GISPEMSMHMALATSLASIIVTSGSSAMNHLKLGNVDMFVVKWLMPGVVIGGFVGANIAE 102

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +   +L K F +  L + + M +  ++   +  P + V  ++G   G +S   G+GGG 
Sbjct: 103 WIPTHYLPKVFGVIVLCLSVQMFRSIKVTSSKPMPSSPVTVVYGTGIGVVSSLAGIGGGS 162

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            +   +  +G  + KA  +S+    +IA   ++  I  G+ + GLP +S+G+V + A+L 
Sbjct: 163 LSVPFLNKHGIEMRKAVGSSSVCGCVIAISGMIGFILHGYKVEGLPSYSIGYVYLPALLA 222

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 223 IAMASMLTTKVGAKLATSLPTAVLKKIFAVFLMFVAATM 261



 Score = 48.1 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 20/129 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL---GVIAPTSV 83
           +V     G +S L G+GGG + VP L+           I M  A+G+S     VIA + +
Sbjct: 143 VVYGTGIGVVSSLAGIGGGSLSVPFLN--------KHGIEMRKAVGSSSVCGCVIAISGM 194

Query: 84  MSFMEH---------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           + F+ H            G + +  L        +TT V + + + +  + L K FA+F 
Sbjct: 195 IGFILHGYKVEGLPSYSIGYVYLPALLAIAMASMLTTKVGAKLATSLPTAVLKKIFAVFL 254

Query: 135 LLMGILMLK 143
           + +   ML 
Sbjct: 255 MFVAATMLL 263


>gi|148978523|ref|ZP_01814975.1| hypothetical protein VSWAT3_08481 [Vibrionales bacterium SWAT-3]
 gi|145962312|gb|EDK27593.1| hypothetical protein VSWAT3_08481 [Vibrionales bacterium SWAT-3]
          Length = 263

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 104/229 (45%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L        I     M +A+ TSL  I  TS  S + H + G + + ++K  +  + +
Sbjct: 33  PALLFLLPKADIPQEFAMQMALATSLSTIIVTSGSSAINHLKLGNVEIFVVKWLMPGVVV 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
              + S +   +   +L K F +  L++ + ML   R   ++  P +    + G   G +
Sbjct: 93  GGFLGSFVADVIPSQYLPKVFGVIVLVLALQMLLSIRSKSQKAMPGSATTMLCGGGIGLV 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S   G+GGG  +   +  +G  + KA  +S+    +IA   +L  I+ G  + GLP +SL
Sbjct: 153 SSLAGIGGGSLSVPFLNHHGVEMRKAVGSSSVCGFVIAISGMLGFIWHGSSVEGLPAFSL 212

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V + A++ I   S+L T +  KL+  +    L   F++ +   +   
Sbjct: 213 GYVYLPALVAISCTSVLTTRVGAKLATQLPTPVLKKFFAVFLMFIAATM 261



 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 20/126 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G +S L G+GGG + VP L+           + M  A+G+S       ++   +  
Sbjct: 146 GGGIGLVSSLAGIGGGSLSVPFLNH--------HGVEMRKAVGSSSVCGFVIAISGMLGF 197

Query: 90  RRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
             HG+            + +  L        +TT V + + + +    L K FA+F + +
Sbjct: 198 IWHGSSVEGLPAFSLGYVYLPALVAISCTSVLTTRVGAKLATQLPTPVLKKFFAVFLMFI 257

Query: 138 GILMLK 143
              ML 
Sbjct: 258 AATMLL 263


>gi|296112493|ref|YP_003626431.1| hypothetical protein MCR_0266 [Moraxella catarrhalis RH4]
 gi|295920187|gb|ADG60538.1| conserved hypothetical protein [Moraxella catarrhalis RH4]
 gi|326561532|gb|EGE11875.1| hypothetical protein E9G_02835 [Moraxella catarrhalis 7169]
 gi|326563597|gb|EGE13850.1| hypothetical protein E9O_08012 [Moraxella catarrhalis 12P80B1]
 gi|326564113|gb|EGE14351.1| hypothetical protein E9M_01921 [Moraxella catarrhalis 46P47B1]
 gi|326566510|gb|EGE16657.1| hypothetical protein E9K_01606 [Moraxella catarrhalis 103P14B1]
 gi|326568002|gb|EGE18094.1| hypothetical protein E9S_09548 [Moraxella catarrhalis BC7]
 gi|326570695|gb|EGE20729.1| hypothetical protein E9Q_00735 [Moraxella catarrhalis BC1]
 gi|326571251|gb|EGE21274.1| hypothetical protein E9U_02816 [Moraxella catarrhalis BC8]
 gi|326573067|gb|EGE23040.1| hypothetical protein E9W_07231 [Moraxella catarrhalis CO72]
 gi|326577235|gb|EGE27128.1| hypothetical protein E9Y_00562 [Moraxella catarrhalis 101P30B1]
          Length = 265

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 69/258 (26%), Positives = 117/258 (45%), Gaps = 2/258 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
                  A  ++G  +GLFGVGGG+V+VP L       G+   I  HVA+GT+L  I  T
Sbjct: 2   IYIWFAAAGIIAGLCAGLFGVGGGMVIVPALIWILAAYGMPTDIVPHVAVGTALATIILT 61

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H + G +  +I K+    L + ++  + + + +  + L        +L+ I M
Sbjct: 62  SISSMTAHHKRGGVRWEIFKNMSKGLVLGSLFGAWVATLISGAALQAILGAGAILVAIKM 121

Query: 142 L-KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           L   ++   +   P  Y +   G+V G LS   G+GGG  T   +   G  + +A  TSA
Sbjct: 122 LFFPNQERLDIPPPPAYKQGFAGVVIGILSAIFGIGGGSLTVPYLSQNGVPMRQAVGTSA 181

Query: 201 GVSALIAFPALLVRIYSGWGL-NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                IA       I+ G  +        +GFV+IGA + I  +S ++  +  KL++ + 
Sbjct: 182 ACGLPIALAGAFGFIWFGHQVGTANIDGLIGFVHIGAFITISILSFIMAKVGAKLAHALP 241

Query: 260 KKYLTIGFSMIMFTTSFV 277
            + L   F +++      
Sbjct: 242 AQTLKRAFGVLLMIVGVR 259



 Score = 43.5 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 21/130 (16%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
            A  + G LS +FG+GGG + VP LS         + + M  A+GTS     P ++    
Sbjct: 142 FAGVVIGILSAIFGIGGGSLTVPYLS--------QNGVPMRQAVGTSAACGLPIALAGAF 193

Query: 88  EHRRHGT-------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
                G              +++        +  I   V + +   +    L +AF +  
Sbjct: 194 GFIWFGHQVGTANIDGLIGFVHIGAFITISILSFIMAKVGAKLAHALPAQTLKRAFGVLL 253

Query: 135 LLMGILMLKR 144
           +++G+ ++  
Sbjct: 254 MIVGVRLIIG 263


>gi|307941782|ref|ZP_07657137.1| membrane protein [Roseibium sp. TrichSKD4]
 gi|307775390|gb|EFO34596.1| membrane protein [Roseibium sp. TrichSKD4]
          Length = 275

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 81/269 (30%), Positives = 140/269 (52%), Gaps = 1/269 (0%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  +S   +      ++    ++G ++GL GVGGG+V+VPVL   F  +G+D S+ MHVA
Sbjct: 1   MEDISLVSLAILAVALLATGVVAGIIAGLLGVGGGIVIVPVLYYMFNALGVDQSVLMHVA 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL  I  T   S   H + G+++M +LK W + + +  V  + +  ++    L   F
Sbjct: 61  VGTSLATILATGTSSARAHWKRGSVDMDLLKSWWWAIALGVVGGATLAGNISGGALTAVF 120

Query: 131 AIFCLLMGILML-KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            +  +++   ML +++      K P   ++   G++ G +S  +G+GGG      +  + 
Sbjct: 121 GVVAVVVAANMLMRKEGAALAEKLPGPPLREALGVMIGGISVMMGIGGGTLGVPTLTLFN 180

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             I KA  T+A +  +IA P  L+ IY GWG    PP+S+G+VN+   L+I+P S    P
Sbjct: 181 FPIRKAVGTAAAIGLIIAVPGTLMSIYFGWGAENRPPFSVGYVNLIGFLLIIPASTYTAP 240

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L  K+++ I    L + F++ +  T    
Sbjct: 241 LGAKIAHAIDPSKLKLVFALFLGFTGVRM 269



 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 4/117 (3%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             + G +S + G+GGG + VP L+       + +G   +I + +A+  +L  I       
Sbjct: 154 GVMIGGISVMMGIGGGTLGVPTLTLFNFPIRKAVGTAAAIGLIIAVPGTLMSIYFGWGAE 213

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                  G +N+      I     T  + + +   +D S L   FA+F    G+ ML
Sbjct: 214 NRPPFSVGYVNLIGFLLIIPASTYTAPLGAKIAHAIDPSKLKLVFALFLGFTGVRML 270


>gi|71909623|ref|YP_287210.1| hypothetical protein Daro_4013 [Dechloromonas aromatica RCB]
 gi|71849244|gb|AAZ48740.1| Protein of unknown function DUF81 [Dechloromonas aromatica RCB]
          Length = 269

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 76/258 (29%), Positives = 125/258 (48%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + I   ++    +G  +GL GVGGG+V+VPVL+  F  +G      +H+A+GTS+  I  
Sbjct: 5   EAIPAYLLTGACAGFFAGLLGVGGGVVVVPVLTMIFAWLGFPGREVLHLALGTSIATILF 64

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS+ S   H  H  +   +++     + I T + + +   +    L+  F  F L + + 
Sbjct: 65  TSLSSLRAHHAHRAVLWPVMRALTPGILIGTSLGAGLAVAISSRALSIFFVGFMLFVALQ 124

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           M+   R    R  P      + G+V G ++    +GGG  T   ++    + ++A  TSA
Sbjct: 125 MIANLRPQPSRNLPGRAGLGLAGIVIGAVASLAAMGGGALTVPYLIRCNVNPHQAIGTSA 184

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            V   IA    L  I++GW   GLPP SLGFV + A+ IIL  S+L  PL  +L++ +  
Sbjct: 185 AVGLPIALGGTLGYIWNGWAHPGLPPGSLGFVYLPALGIILLASVLAAPLGARLAHRLPV 244

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F+ ++   S   
Sbjct: 245 IVLKRIFAGLLLILSAKM 262



 Score = 41.6 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +A  + G ++ L  +GGG + VP L +         ++  H A+GTS  V  P ++  
Sbjct: 143 LGLAGIVIGAVASLAAMGGGALTVPYLIRC--------NVNPHQAIGTSAAVGLPIALGG 194

Query: 86  FMEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G + +  L   +    +   + + +   +    L + FA  
Sbjct: 195 TLGYIWNGWAHPGLPPGSLGFVYLPALGIILLASVLAAPLGARLAHRLPVIVLKRIFAGL 254

Query: 134 CLLMGILML 142
            L++   ML
Sbjct: 255 LLILSAKML 263


>gi|157960851|ref|YP_001500885.1| hypothetical protein Spea_1023 [Shewanella pealeana ATCC 700345]
 gi|157845851|gb|ABV86350.1| protein of unknown function DUF81 [Shewanella pealeana ATCC 700345]
          Length = 266

 Score =  198 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 115/261 (44%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  +  +C+ +V     G ++GL G+GGGL+ VP L      +GI      HVA+ TSL 
Sbjct: 2   ESWLYILCICLVLGAGIGFMAGLLGIGGGLIAVPALLHILPQIGIASESLPHVAIATSLA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I  TS+ S   H +   I   + K  +    +  + +  +   +    L + FAIF +L
Sbjct: 62  AIILTSLSSARAHHKRQNIPWPLFKSMLPGFVLGAMCSGFISEMIPAKSLQQIFAIFVIL 121

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           M + M    +    R  P     +        ++  +G+GGG+     + + G  +  A 
Sbjct: 122 MAVQMAFPFKAESNRAMPGPISLFFAATGIAIIAALMGIGGGVLLVPFLTWCGLQMRYAV 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             SA    LIA    +    +GW  + LP W+LG++ + A++ I+  S+L+ P+  + + 
Sbjct: 182 GFSAATGLLIASFGSIGYTLAGWNTSSLPEWTLGYIYLPALIGIVSTSMLMAPVGARAAT 241

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            +    L   F++ +      
Sbjct: 242 NLPTAKLKRFFAVFLALVGLK 262



 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 4/109 (3%)

Query: 39  LFGVGGGLVMVPVLSKAFQLM----GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT 94
           L G+GGG+++VP L+     M    G   +  + +A   S+G        S +     G 
Sbjct: 157 LMGIGGGVLLVPFLTWCGLQMRYAVGFSAATGLLIASFGSIGYTLAGWNTSSLPEWTLGY 216

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           I +  L   +    +   V +   +++  + L + FA+F  L+G+ ++ 
Sbjct: 217 IYLPALIGIVSTSMLMAPVGARAATNLPTAKLKRFFAVFLALVGLKLVL 265


>gi|326577826|gb|EGE27694.1| hypothetical protein EA1_01342 [Moraxella catarrhalis O35E]
          Length = 265

 Score =  198 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 69/258 (26%), Positives = 117/258 (45%), Gaps = 2/258 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
                  A  ++G  +GLFGVGGG+V+VP L       G+   I  HVA+GT+L  I  T
Sbjct: 2   IYIWFAAAGIIAGLCAGLFGVGGGMVIVPALIWILAAYGMPTDIVPHVAVGTALATIILT 61

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H + G +  +I K+    L + ++  + + + +  + L        +L+ I M
Sbjct: 62  SISSMTAHHKRGGVRWEIFKNMSKGLVLGSLFGAWVATLISGAALQAILGAGAILVAIKM 121

Query: 142 L-KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           L   ++   +   P  Y +   G+V G LS   G+GGG  T   +   G  + +A  TSA
Sbjct: 122 LFFPNQERLDIPPPPAYKQGFAGVVIGILSAIFGIGGGSLTVPYLSQNGVPMRQAVGTSA 181

Query: 201 GVSALIAFPALLVRIYSGWGL-NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                IA       I+ G  +        +GFV+IGA + I  +S ++  +  KL++ + 
Sbjct: 182 ACGLPIALAGAFGFIWFGHQIGTANIDGLIGFVHIGAFITISILSFIMAKVGAKLAHALP 241

Query: 260 KKYLTIGFSMIMFTTSFV 277
            + L   F +++      
Sbjct: 242 AQTLKRAFGVLLMIVGVR 259



 Score = 43.5 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 21/130 (16%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
            A  + G LS +FG+GGG + VP LS         + + M  A+GTS     P ++    
Sbjct: 142 FAGVVIGILSAIFGIGGGSLTVPYLS--------QNGVPMRQAVGTSAACGLPIALAGAF 193

Query: 88  EHRRHGT-------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
                G              +++        +  I   V + +   +    L +AF +  
Sbjct: 194 GFIWFGHQIGTANIDGLIGFVHIGAFITISILSFIMAKVGAKLAHALPAQTLKRAFGVLL 253

Query: 135 LLMGILMLKR 144
           +++G+ ++  
Sbjct: 254 MIVGVRLIIG 263


>gi|83943000|ref|ZP_00955460.1| membrane protein [Sulfitobacter sp. EE-36]
 gi|83846008|gb|EAP83885.1| membrane protein [Sulfitobacter sp. EE-36]
          Length = 273

 Score =  198 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 74/265 (27%), Positives = 130/265 (49%), Gaps = 2/265 (0%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
               ++  + +I+     +G ++GL GVGGG+V+VP    AFQ +G D    M + + TS
Sbjct: 3   DPTLLLQIVLMIMAIGAFAGVMAGLLGVGGGIVLVPAFFYAFQALGYDSPQLMQMCLATS 62

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           L  I  TS+ S   H + G ++  ILK W   + I  ++  L+++ +  S L   F    
Sbjct: 63  LATIIVTSLRSVHSHNKKGAVDWAILKTWAPGIVIGAIIGMLVVAQLRTSVLQGIFGGLA 122

Query: 135 LLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
           L++G+ M   R      +  P    +       GFLS  +G+GGG F   LM  +   I+
Sbjct: 123 LVVGLYMAFGRAHWRLGQAMPRGAARAALSPSVGFLSVLMGIGGGSFGVPLMSLFNVPIH 182

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +A AT+AG   LIA P+++  +         PP ++G VN+    I++ ++++  PL  +
Sbjct: 183 RAVATAAGFGVLIAVPSVIGFLLVD-AAPNSPPLTVGAVNLPTFAIVIAMTLITAPLGVR 241

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVF 278
           L++ +  K L   F++ +   +   
Sbjct: 242 LAHAMDPKPLKRVFAVFLILVALNM 266



 Score = 43.1 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 19/124 (15%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
            G LS L G+GGG   VP++S          ++ +H A+ T+ G     +V S +     
Sbjct: 155 VGFLSVLMGIGGGSFGVPLMSLF--------NVPIHRAVATAAGFGVLIAVPSVIGFLLV 206

Query: 93  -----------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                      G +N+      I +  IT  +   +   +D   L + FA+F +L+ + M
Sbjct: 207 DAAPNSPPLTVGAVNLPTFAIVIAMTLITAPLGVRLAHAMDPKPLKRVFAVFLILVALNM 266

Query: 142 LKRD 145
           L++ 
Sbjct: 267 LRKS 270


>gi|117925601|ref|YP_866218.1| hypothetical protein Mmc1_2312 [Magnetococcus sp. MC-1]
 gi|117609357|gb|ABK44812.1| protein of unknown function DUF81 [Magnetococcus sp. MC-1]
          Length = 265

 Score =  198 bits (504), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 2/262 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  + +   A   +G ++GLFGVGGG+V+VP L   F   G+D  + M +A+ TSL  I
Sbjct: 1   MLYLVLVSAFAGLFAGVVAGLFGVGGGIVLVPTLLLLFVWYGVDTGVVMQMAVATSLATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T++ +   H + G +   ++  +   L +     + + + +    L   FA+F + +G
Sbjct: 61  IVTNISASWHHHKKGAVLWPMVGWFAPGLLLGAWSGAWLAAWMAGEHLRILFALFEMAVG 120

Query: 139 ILMLKRDRLYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKAT 196
           + ML   R           + + + G V G +S   G+GGG  +   + L +G S+ +A 
Sbjct: 121 LKMLTASRDGGGAGLHWPRWSRPLIGGVIGGISTLFGIGGGTLSVPTLSLLFGLSMQRAV 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           ATS+ +  ++A    +  + +G G+   P W +GFV     L I+  ++L TPL  K ++
Sbjct: 181 ATSSAMGLVLALFGTVGFMQAGQGVAQRPDWCVGFVAWPVFLGIITATLLTTPLGVKWAH 240

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            +    L  GF + +       
Sbjct: 241 AMDGVKLKRGFGLFLLLVGVKM 262



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 19/127 (14%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +   + G +S LFG+GGG + VP LS  F        + M  A+ TS  +    ++   +
Sbjct: 144 LIGGVIGGISTLFGIGGGTLSVPTLSLLF-------GLSMQRAVATSSAMGLVLALFGTV 196

Query: 88  EHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
              + G             +   +    I    +TT +       +D   L + F +F L
Sbjct: 197 GFMQAGQGVAQRPDWCVGFVAWPVFLGIITATLLTTPLGVKWAHAMDGVKLKRGFGLFLL 256

Query: 136 LMGILML 142
           L+G+ ML
Sbjct: 257 LVGVKML 263


>gi|77165969|ref|YP_344494.1| hypothetical protein Noc_2511 [Nitrosococcus oceani ATCC 19707]
 gi|254436359|ref|ZP_05049865.1| conserved domain protein, putative [Nitrosococcus oceani AFC27]
 gi|76884283|gb|ABA58964.1| Protein of unknown function DUF81 [Nitrosococcus oceani ATCC 19707]
 gi|207088049|gb|EDZ65322.1| conserved domain protein, putative [Nitrosococcus oceani AFC27]
          Length = 274

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 97/224 (43%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+V VL   F   GI   + MH+A+GTS   I  TS+ +   H R   +    +      
Sbjct: 28  VIVAVLVHLFSAQGIGKGLSMHMALGTSQATIVMTSIAAIWAHHRRRGVLWPTMVAMAPG 87

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + +  ++ +++   +    L   F  F LL+   M            P  ++  + G + 
Sbjct: 88  IVLGALLGAIIAEALSGQILKGLFGSFALLIAWRMGVGIHPAALHPLPRRWILALIGALI 147

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S   G+GGG  T   ++++   +  A  T++     +A       ++ GW   GLP 
Sbjct: 148 GTVSALFGIGGGSLTVPYLVWHSIPMRNAVGTASACGFPLAVSGTCGFVWMGWDKLGLPA 207

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           WS G+V   A + I+  S+L  PL  +L++ +    L   F++ 
Sbjct: 208 WSSGYVYWPAAVSIVATSMLFAPLGARLAHRLASITLKRVFAIF 251



 Score = 43.5 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 20/122 (16%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +   L GT+S LFG+GGG + VP L           SI M  A+GT+     P +V
Sbjct: 138 WILALIGALIGTVSALFGIGGGSLTVPYLVW--------HSIPMRNAVGTASACGFPLAV 189

Query: 84  MSF------------MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
                          +     G +        +    +   + + +   +    L + FA
Sbjct: 190 SGTCGFVWMGWDKLGLPAWSSGYVYWPAAVSIVATSMLFAPLGARLAHRLASITLKRVFA 249

Query: 132 IF 133
           IF
Sbjct: 250 IF 251


>gi|74318691|ref|YP_316431.1| hypothetical protein Tbd_2673 [Thiobacillus denitrificans ATCC
           25259]
 gi|74058186|gb|AAZ98626.1| conserved hypothetical membrane protein [Thiobacillus denitrificans
           ATCC 25259]
          Length = 268

 Score =  197 bits (503), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 69/246 (28%), Positives = 111/246 (45%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
                      + G ++GL GVGGGL++VPVL    Q  G+   I   VA+ TSL  I  
Sbjct: 7   TLFAAYGALGLVVGFVAGLLGVGGGLIIVPVLILLLQGQGLAPGIEPQVALATSLASILF 66

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS+ S   H R G ++  +++     +   T+  +L+ + V    L   F  F       
Sbjct: 67  TSLSSVRAHHRRGAVDWLLVRRITPGILAGTLAGALLAAEVSALLLKLFFVAFLFYAAFQ 126

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           M    +    R  P      + G V G +S  +G+GGG  +   ML++  ++++A ATSA
Sbjct: 127 MWLDFKPAPHRALPARPGMTLAGAVIGAVSSWVGIGGGTLSVPFMLWHNVALHRAIATSA 186

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +   IA          G G+ G PP S GFV + A+  I+  S++  PL  + ++ +  
Sbjct: 187 AIGFPIALAGTAGYALGGLGVTGRPPASAGFVYLPALAGIVLGSVVTAPLGARTAHRMPV 246

Query: 261 KYLTIG 266
           + L   
Sbjct: 247 RTLKRV 252


>gi|254504454|ref|ZP_05116605.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11]
 gi|222440525|gb|EEE47204.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11]
          Length = 275

 Score =  197 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 86/269 (31%), Positives = 138/269 (51%), Gaps = 1/269 (0%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  LS   +      ++    ++G ++GL GVGGG+V+VPVL   F  + ID +I MHVA
Sbjct: 1   MEDLSFVSLALLAGALLATGLVAGIIAGLLGVGGGIVIVPVLYYMFTALKIDPAILMHVA 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL  I  T   S   H   G++++ +LK W + + I  +  +++  ++    L   F
Sbjct: 61  VGTSLATILATGTSSARAHYNRGSVDIDLLKRWWWAIAIGVISGAMIAGNMSGGALTLVF 120

Query: 131 AIFCLLMGILMLKRDRLYC-ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            +  LL+   ML R        K P + +K + G + G +S  +G+GGG      +  + 
Sbjct: 121 GVVALLVSANMLLRKEGSALADKLPGSPIKELLGFLIGGISVMMGIGGGTLGVPTLTLFN 180

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             I KA  T+A +  +IA P  L+ I+ GWG  GLPP SLG+VN+    +I+P S    P
Sbjct: 181 YPIRKAVGTAAAIGLIIAVPGTLMSIFFGWGAEGLPPLSLGYVNLIGFFLIIPASTFAAP 240

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L  K+++ I    L + F++ +  T    
Sbjct: 241 LGAKIAHAIDPSKLKLIFALFLGFTGLRM 269



 Score = 43.9 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 4/121 (3%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           +  FL G +S + G+GGG + VP L+       + +G   +I + +A+  +L  I     
Sbjct: 152 LLGFLIGGISVMMGIGGGTLGVPTLTLFNYPIRKAVGTAAAIGLIIAVPGTLMSIFFGWG 211

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              +     G +N+      I        + + +   +D S L   FA+F    G+ M+ 
Sbjct: 212 AEGLPPLSLGYVNLIGFFLIIPASTFAAPLGAKIAHAIDPSKLKLIFALFLGFTGLRMIY 271

Query: 144 R 144
            
Sbjct: 272 D 272


>gi|330447406|ref|ZP_08311055.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491597|dbj|GAA05552.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 267

 Score =  197 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 63/229 (27%), Positives = 109/229 (47%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       GI   + MH+A+ TSL  I  TS+ S   H + G I+  ++K     +  
Sbjct: 36  PALVWLLPKAGIASHLVMHIALATSLASIVMTSMASARNHFKLGNIDFSVVKFLAPGIIA 95

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
             +  S++   +   +L K FA+  L + I ML   ++  ++  P + V  + G V G +
Sbjct: 96  GGLSGSVVAELIPSHYLPKVFAVIVLCLAIQMLLSMKVVNDKPLPSSPVCAVSGGVIGLI 155

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S   G+GGG  T   + ++G  + +A  TS+ V  LIA   ++  IY+G G   LP +S+
Sbjct: 156 SSLAGIGGGSLTVPYLSYFGVEMRRAIGTSSLVGLLIAISGMIGFIYAGVGSESLPKYSV 215

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V + A++ I   S++ T     L   +    L   F++++   S   
Sbjct: 216 GYVYLPALIGIAATSMIATRYGAALVSRLPTPTLKKLFAVLLLVISIKM 264



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 20/131 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +  V+  + G +S L G+GGG + VP LS           + M  A+GTS  V    ++ 
Sbjct: 144 VCAVSGGVIGLISSLAGIGGGSLTVPYLSYF--------GVEMRRAIGTSSLVGLLIAIS 195

Query: 85  SFME------------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
             +                 G + +  L        I T   + ++S +    L K FA+
Sbjct: 196 GMIGFIYAGVGSESLPKYSVGYVYLPALIGIAATSMIATRYGAALVSRLPTPTLKKLFAV 255

Query: 133 FCLLMGILMLK 143
             L++ I M  
Sbjct: 256 LLLVISIKMFL 266


>gi|300113325|ref|YP_003759900.1| hypothetical protein Nwat_0623 [Nitrosococcus watsonii C-113]
 gi|299539262|gb|ADJ27579.1| protein of unknown function DUF81 [Nitrosococcus watsonii C-113]
          Length = 274

 Score =  197 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 99/224 (44%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+V VL   F   GI + + MH+A+GTS   I  TS+ +   H R   +   I+      
Sbjct: 28  VIVAVLVHLFSAQGIGNGLTMHMAIGTSQATIVMTSIAAIWAHHRQRGVLWPIMAAMASG 87

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + +  ++ +++   +    L   F  F LL+   M            P  ++  + G + 
Sbjct: 88  IVLGALLGAVIAEALSGQVLKGLFGSFALLIAWRMGVDIHPAAVHSLPRRWILALMGALI 147

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S   G+GGG  T   ++++   +  A  T++     +A       ++ GW   GLP 
Sbjct: 148 GTVSALFGIGGGSLTVPYLVWHSIPMRNAVGTASACGFPLAVSGTCGFVWMGWDKLGLPA 207

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           WS G+V   A + I+  S+L  PL  +L++ +    L   F++ 
Sbjct: 208 WSSGYVYWPAAVSIVATSMLFAPLGARLAHRLASITLKRIFAIF 251



 Score = 43.5 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 20/122 (16%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +   L GT+S LFG+GGG + VP L           SI M  A+GT+     P +V
Sbjct: 138 WILALMGALIGTVSALFGIGGGSLTVPYLVW--------HSIPMRNAVGTASACGFPLAV 189

Query: 84  MSF------------MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
                          +     G +        +    +   + + +   +    L + FA
Sbjct: 190 SGTCGFVWMGWDKLGLPAWSSGYVYWPAAVSIVATSMLFAPLGARLAHRLASITLKRIFA 249

Query: 132 IF 133
           IF
Sbjct: 250 IF 251


>gi|145588817|ref|YP_001155414.1| hypothetical protein Pnuc_0632 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047223|gb|ABP33850.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 272

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 1/231 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP +   F  +G +  + +H+A+ T +  I  T+  +   H +HG+++ K++      + 
Sbjct: 32  VPFMILVFGHLGFNPEVIVHMAIATGMATILFTTSSAIWAHHKHGSVDWKLVVALSPGMI 91

Query: 109 ITTVVTSL-MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
              +V    +   +  S+L+  FAIF +   I ML   +    R+ P     + +G   G
Sbjct: 92  FGGLVGGSELFEALKTSWLSLFFAIFIVYSSIQMLLNKKPKPGRELPGPLGLFGFGTFAG 151

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            L+  +G GG   T   ML+     + A A+S+G+   IA  A L  +Y  WG   LP  
Sbjct: 152 ALASLVGAGGAFITVPFMLWCNVKPHNAMASSSGLGFPIAAAATLGYMYGSWGNPNLPVG 211

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           SLGFV + AV  I+ +SI   P+  K++  +    L   F +++   +   
Sbjct: 212 SLGFVYLPAVACIVAVSIFTAPIGAKMARKLNVGQLKRVFGVMLLFLAAFM 262



 Score = 45.1 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 20/133 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +      +G L+ L G GG  + VP +           ++  H AM +S G+  P +  +
Sbjct: 143 LFGFGTFAGALASLVGAGGAFITVPFMLWC--------NVKPHNAMASSSGLGFPIAAAA 194

Query: 86  FMEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G + +  +   + V   T  + + M   ++   L + F + 
Sbjct: 195 TLGYMYGSWGNPNLPVGSLGFVYLPAVACIVAVSIFTAPIGAKMARKLNVGQLKRVFGVM 254

Query: 134 CLLMGILMLKRDR 146
            L +   ML   R
Sbjct: 255 LLFLAAFMLNESR 267


>gi|83592684|ref|YP_426436.1| hypothetical protein Rru_A1348 [Rhodospirillum rubrum ATCC 11170]
 gi|83575598|gb|ABC22149.1| Protein of unknown function DUF81 [Rhodospirillum rubrum ATCC
           11170]
          Length = 276

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 76/269 (28%), Positives = 133/269 (49%), Gaps = 1/269 (0%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M   +   ++ +   ++V    +G L+GL GVGGG+V+VPVL   F+L  +     MH+A
Sbjct: 1   MTAFTVQQLIPFAIALVVTGAFTGVLAGLLGVGGGIVIVPVLFVIFELFDLPLETAMHIA 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL  I PTS+ S   H R G I+  +++ W   L     +  +    +   +L   F
Sbjct: 61  VGTSLLTIIPTSIASMRAHNRRGAIDWSLVRLWGPFLFFGAALGGIASRFLGGDYLKAIF 120

Query: 131 AIFCLLMGILMLKRDRLYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            I  L + I M    +L      P    ++     V GF S  +G+GGG      +  + 
Sbjct: 121 GILALAVAINMGMPRKLILADALPKRRSLQGAMSAVIGFFSSLMGIGGGTLAVPTLTAFS 180

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +++A  +++    +I+ PA+   I+SGW + G PP+SLG+VN+ A  +I+P+S+++  
Sbjct: 181 FPVHRAVGSASAFGLIISVPAMAGFIWSGWDVAGRPPYSLGYVNLVAAGLIVPMSMIMAR 240

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               L++ +    L   F+  +  T+   
Sbjct: 241 YGASLAHSLKPDNLKRVFAAFLAITALRM 269



 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 20/124 (16%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH- 89
            + G  S L G+GGG + VP L+          S  +H A+G++       SV +     
Sbjct: 155 AVIGFFSSLMGIGGGTLAVPTLTAF--------SFPVHRAVGSASAFGLIISVPAMAGFI 206

Query: 90  -----------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                         G +N+      + +  I     + +   +    L + FA F  +  
Sbjct: 207 WSGWDVAGRPPYSLGYVNLVAAGLIVPMSMIMARYGASLAHSLKPDNLKRVFAAFLAITA 266

Query: 139 ILML 142
           + ML
Sbjct: 267 LRML 270


>gi|298290877|ref|YP_003692816.1| hypothetical protein Snov_0873 [Starkeya novella DSM 506]
 gi|296927388|gb|ADH88197.1| protein of unknown function DUF81 [Starkeya novella DSM 506]
          Length = 278

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 85/271 (31%), Positives = 147/271 (54%), Gaps = 2/271 (0%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           ++  +  D ++     ++VA F +G L+GLFG+GGG ++VPVL + F  +GID    MH+
Sbjct: 1   MLESIPLDHLLWLAGALLVAGFATGILAGLFGIGGGAIIVPVLYEVFGAVGIDHDERMHL 60

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+GT+L +I PT++ SF+ HRR   ++  +LK W   + I  V  +++ +  +   L  A
Sbjct: 61  AVGTALAIIVPTALRSFLAHRRRTKVDNGLLKQWAAPIIIGVVAGTVLAAISNDVVLKIA 120

Query: 130 FAIFCLLMGILMLK-RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F  F  LM   +L  RD      + P      ++G   G  +  +G+ GG    +++  Y
Sbjct: 121 FVAFAALMSAKLLFGRDSWVVADQLPGRVPMALYGFGIGASAPLIGISGGGIATVVLTLY 180

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNG-LPPWSLGFVNIGAVLIILPISILI 247
              I+ A ATSAG+ ALIA P  +  I SG      LPP SLG++++  ++++  ++ L+
Sbjct: 181 RVPIHTAIATSAGLGALIAVPGTIGYIISGLPHMDELPPLSLGYISLPGLVLVGGVATLV 240

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            PL  ++++   K+ L +GF + +      F
Sbjct: 241 APLGARMAHAFSKRQLEVGFGIYLLLVGLRF 271


>gi|240949934|ref|ZP_04754253.1| permease [Actinobacillus minor NM305]
 gi|240295604|gb|EER46322.1| permease [Actinobacillus minor NM305]
          Length = 263

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 121/260 (46%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +++     +    + G L+GLFG+GGGL++VP L     L G+     M  A+GTS   I
Sbjct: 1   MIEVFLSCLALGTVVGFLAGLFGIGGGLIIVPSLVYLLPLAGVSPEHVMSAALGTSFSTI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S   H + G ++  + K +I  + I+  +  L+IS +D   ++K FA+  + + 
Sbjct: 61  VITAFSSAQRHHKLGNVDWNVSKVFIPSIMISVFLCGLIISGLDAKLMSKLFAVMVVYLA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           + M+   +   + K        I G + G LS   G+GGG F    +   G  + +A  T
Sbjct: 121 LRMIFSLKKEQKIKPLTTQTTVIAGGIIGALSSVAGIGGGAFIVPFLNGRGLEMKRAIGT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+   A +        I SGW +  LP +SLG+V + A+L I   S   + L    + ++
Sbjct: 181 SSFCGAFLGLSGTFSFIASGWNVEDLPDYSLGYVYLPALLGITMTSYFTSKLGANAANVL 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++++   +   
Sbjct: 241 PVATLKKAFAVMLVVIAINM 260



 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A  + G LS + G+GGG  +VP L+           + M  A+GTS    A   +   
Sbjct: 142 VIAGGIIGALSSVAGIGGGAFIVPFLN--------GRGLEMKRAIGTSSFCGAFLGLSGT 193

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
                             G + +  L         T+ + +   + +  + L KAFA+  
Sbjct: 194 FSFIASGWNVEDLPDYSLGYVYLPALLGITMTSYFTSKLGANAANVLPVATLKKAFAVML 253

Query: 135 LLMGILMLKR 144
           +++ I M  +
Sbjct: 254 VVIAINMFLK 263


>gi|171059351|ref|YP_001791700.1| hypothetical protein Lcho_2670 [Leptothrix cholodnii SP-6]
 gi|170776796|gb|ACB34935.1| protein of unknown function DUF81 [Leptothrix cholodnii SP-6]
          Length = 270

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 1/232 (0%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVP ++      G+D ++ + +A+ TS+  I  TS+ S   H + G +   I++     +
Sbjct: 33  MVPFMTLILSHRGVDSALSVKMAIATSMATILFTSISSVRAHHKRGAVRWDIVRVLAPGI 92

Query: 108 PITTVVTSLMI-SHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
               ++    + + +  + L   FA+F       ML   +    R+ P        G V 
Sbjct: 93  VGGGLLAGAGVFALLKGTTLALVFALFVAFSATQMLLNKKPPPSRQMPGTAGSLGAGGVI 152

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           GF+SG +G GGG  +   M +   +++ A ATSA +   IA    +  +  GW +    P
Sbjct: 153 GFISGLVGAGGGFISVPFMGWCNVAMHNAVATSAALGFPIALANTVGYVVGGWSMQSPVP 212

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +LGF+ +  + +I   S+L  PL  + ++ +  + L   F+++++  +   
Sbjct: 213 GALGFLWLPGLAVIATASVLTAPLGARTAHAMNVQQLKKVFALVLYLLAAYM 264



 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + A  + G +SGL G GGG + VP +           ++ MH A+ TS  +  P ++ + 
Sbjct: 146 LGAGGVIGFISGLVGAGGGFISVPFMGWC--------NVAMHNAVATSAALGFPIALANT 197

Query: 87  MEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           + +               G + +  L        +T  + +     ++   L K FA+  
Sbjct: 198 VGYVVGGWSMQSPVPGALGFLWLPGLAVIATASVLTAPLGARTAHAMNVQQLKKVFALVL 257

Query: 135 LLMGILMLKR 144
            L+   ML +
Sbjct: 258 YLLAAYMLTK 267


>gi|114764120|ref|ZP_01443359.1| membrane protein [Pelagibaca bermudensis HTCC2601]
 gi|114543478|gb|EAU46493.1| membrane protein [Roseovarius sp. HTCC2601]
          Length = 274

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P     FQ +G D    M V + TSL  I  TS+ S + H R G ++  ILK W   + I
Sbjct: 38  PAFFFTFQALGYDGPQTMQVCLATSLATIIVTSLRSVVSHNRKGAVDWDILKGWAPGIVI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             ++  L  S +  + L   F +  L++G  M   +         P    +YI+    GF
Sbjct: 98  GAIIGVLAASALKSTSLQVIFGVLALVIGAYMTFGKRSWRLAEAMPSGGKQYIYSPAVGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  +   I++A AT+AG   LIA P+ +  +         PP++
Sbjct: 158 LSVLMGIGGGSFGVPLMSLHNVPIHRAVATAAGFGVLIAVPSAVGFLLLTIEPGSRPPFT 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +G VN+   L+++ +++L  PL  KL++ +    L   F   +   +   
Sbjct: 218 IGAVNLPGFLVVIAMTLLTAPLGVKLAHAMDPAPLKKLFGAFLILVALNM 267



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 12/120 (10%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSK--------AFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            G LS L G+GGG   VP++S              G    I +  A+G  L  I P    
Sbjct: 155 VGFLSVLMGIGGGSFGVPLMSLHNVPIHRAVATAAGFGVLIAVPSAVGFLLLTIEP---- 210

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                   G +N+      I +  +T  +   +   +D + L K F  F +L+ + ML++
Sbjct: 211 GSRPPFTIGAVNLPGFLVVIAMTLLTAPLGVKLAHAMDPAPLKKLFGAFLILVALNMLRK 270


>gi|114707272|ref|ZP_01440169.1| hypothetical protein FP2506_03600 [Fulvimarina pelagi HTCC2506]
 gi|114537153|gb|EAU40280.1| hypothetical protein FP2506_03600 [Fulvimarina pelagi HTCC2506]
          Length = 275

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 75/239 (31%), Positives = 134/239 (56%), Gaps = 1/239 (0%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           +GGG + VPVL + +Q + + +++ MH+A+GTS+  I PTS+ S   H     ++ ++LK
Sbjct: 33  IGGGAIYVPVLYQLYQWLQVPEAVAMHLAVGTSIATIVPTSLRSLYAHLSREAVDRRLLK 92

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK-RDRLYCERKFPDNYVKY 160
           +W   +P  ++  + + +      L   FA    ++ + +L  R      +  P    + 
Sbjct: 93  EWCIAVPAGSIAGAFLAASASSVTLRAIFAALAFVISLKLLFGRIEWTLGKDLPGKAGRS 152

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
           + G++ GF S  +G+GGG+  N  M  YG  + ++ ATSAGV ALIA P +   I+ GWG
Sbjct: 153 LAGVIIGFSSALIGIGGGVLNNTFMTLYGRPMIQSVATSAGVGALIAVPGVATYIFGGWG 212

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              LPP+SLGFV++  ++++ P+S++  P    L++ + ++ L IGF + +   +  FA
Sbjct: 213 DPLLPPFSLGFVSLTTLVVVAPMSLIAVPFGAALAHKLSRRTLEIGFGIFLVLVALRFA 271


>gi|114797241|ref|YP_761051.1| hypothetical protein HNE_2356 [Hyphomonas neptunium ATCC 15444]
 gi|114737415|gb|ABI75540.1| putative membrane protein [Hyphomonas neptunium ATCC 15444]
          Length = 314

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 81/273 (29%), Positives = 132/273 (48%), Gaps = 8/273 (2%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG-----IDDSICMH 68
           +     + +I  ++ A  L+G ++GLFG+GGG V+VP L+    L+      I     MH
Sbjct: 2   ILTPDTLLFIAAMLAAGALAGFVAGLFGIGGGFVVVPALASVLTLLSAGGDAIASDKIMH 61

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           VA+GTSL  I  TS+ S   H + G ++ +ILK W   +    V+   +  ++D   L  
Sbjct: 62  VAIGTSLATIIFTSLRSVQAHAKRGAVDFEILKSWTPWVVTGVVLGLFVAQYLDGHALKL 121

Query: 129 AFAIFCLLMGILMLKR---DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
            F +   +M    L      R     + P  +++   G V G     LG+GGG    L+M
Sbjct: 122 TFGVGVFIMAWHFLFPVLTHRGPVANEMPKGFMRGGLGSVLGGYCTLLGIGGGTPAVLIM 181

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
              G  +++A AT+AG   +IA P  +  I +G G +GLP  SLG+VNI A + I  +S+
Sbjct: 182 TLSGQPMHRAVATAAGFGTIIAVPGTIGSIIAGLGQSGLPFGSLGYVNIIAAVAITSMSM 241

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +  P     ++ +   +L     + +  TS + 
Sbjct: 242 ITAPWGVAAAHSLNAVHLRRALGLYLLVTSSIM 274


>gi|212213509|ref|YP_002304445.1| hypothetical membrane spanning protein [Coxiella burnetii
           CbuG_Q212]
 gi|212011919|gb|ACJ19300.1| hypothetical membrane spanning protein [Coxiella burnetii
           CbuG_Q212]
          Length = 273

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 75/259 (28%), Positives = 127/259 (49%), Gaps = 1/259 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  L++    ++G L  LFGVGG +V+VPV    F    +     MH A+GTSL ++ 
Sbjct: 8   IYFALLLLFVGGIAGYLGSLFGVGGSIVLVPVFLTIFPFFHVSHEAVMHNAVGTSLALLV 67

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           P +++S   H + G  +  +LK WI  + I  +   L+I  +  ++L   FA++     +
Sbjct: 68  PNALLSARNHYKRGNFDFPLLKQWIPFILIGAITGILIIKFIPTAYLKILFALYLYASFL 127

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            ++ +     E + P  +   I G++ G  S  LG+GGG F+      Y  SI K+ A +
Sbjct: 128 YVILKKGNEIEGQ-PRGWGMRIAGVLIGGFSVLLGMGGGTFSIPFCQAYNYSIKKSIALA 186

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +  +  I     +  I SGW   G  P+SLGFVN+ A + ILP  I+ +P   K +  + 
Sbjct: 187 SATAIFIGLIGTIGVIISGWNAPGRAPYSLGFVNLLAFICILPTIIIFSPFGVKTAQRLS 246

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            + L I ++  + T     
Sbjct: 247 LRQLRILYAFFLLTMGLYM 265


>gi|153206951|ref|ZP_01945769.1| putative membrane protein [Coxiella burnetii 'MSU Goat Q177']
 gi|212219558|ref|YP_002306345.1| hypothetical membrane spanning protein [Coxiella burnetii
           CbuK_Q154]
 gi|120577024|gb|EAX33648.1| putative membrane protein [Coxiella burnetii 'MSU Goat Q177']
 gi|212013820|gb|ACJ21200.1| hypothetical membrane spanning protein [Coxiella burnetii
           CbuK_Q154]
          Length = 277

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/262 (29%), Positives = 128/262 (48%), Gaps = 3/262 (1%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  L++    ++G L  LFGVGGG+++VPV    F    +     MH A+GTSL ++ 
Sbjct: 8   IYFALLLLFVGGIAGYLGSLFGVGGGIILVPVFLTIFPFFHVSHEAVMHNAVGTSLALLV 67

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           P +++S   H + G  +  +LK WI  + I  +   L+I  +  ++L   FA++     +
Sbjct: 68  PNALLSARNHYKRGNFDFPLLKQWIPFILIGAITGILIIKFIPTAYLKILFALYLYASFL 127

Query: 140 L-MLKRDRLYCERKFPDNYVKYIWG--MVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
             +LK+ +       P  +   I G  ++ G  S  LG+GGG F+      Y  SI K+ 
Sbjct: 128 YVILKKGKGNEIEGQPRGWGMRIAGVCVLIGGFSVLLGIGGGTFSIPFCQAYNYSIKKSI 187

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A ++  +  I     +  I SGW   G  P+SLGFVN+ A + ILP  I+ +P   K + 
Sbjct: 188 ALASATAIFIGLIGTIGVIISGWNAPGRAPYSLGFVNLLAFICILPTIIIFSPFGVKTAQ 247

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            +  + L I ++  + T     
Sbjct: 248 RLSLRQLRILYAFFLLTMGLYM 269


>gi|238022797|ref|ZP_04603223.1| hypothetical protein GCWU000324_02709 [Kingella oralis ATCC 51147]
 gi|237866000|gb|EEP67136.1| hypothetical protein GCWU000324_02709 [Kingella oralis ATCC 51147]
          Length = 263

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 69/259 (26%), Positives = 124/259 (47%), Gaps = 2/259 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
                ++   ++G  +GLFG+GGG ++VP+L       G+ D+  M +A+GTS   I  T
Sbjct: 2   LFLAYLIIGAIAGFFAGLFGIGGGTIIVPMLLLLLPQAGVPDAQLMAMALGTSFATIVFT 61

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S  +H + G +++++ + ++  L  +  V   ++S + K+ L K FA   LL+ I M
Sbjct: 62  SISSAWQHHKFGNVDLRVFRFFVPALMASVFVFGYLVSGLPKAKLMKMFAAMMLLLAIKM 121

Query: 142 LKRDRLYCER--KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
           L   +       K     V+ I G+V G LS   G+GGG F    +   G  + +A  TS
Sbjct: 122 LIASKQKTAPLAKPLTARVQIIAGVVIGALSSFAGIGGGAFIVPFLNSRGFEMKRAIGTS 181

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +    L+A  A +  + SG     +P +S+GFV + A + I+  S++ +      +  + 
Sbjct: 182 SACGVLLAIGATIGFMLSGSRFADMPAYSIGFVYLPAFIGIVCASVVTSRFGAMAANRLP 241

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              L   F   +   + + 
Sbjct: 242 VSVLKKAFGAFLCCVAVMM 260



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 4/122 (3%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVL----SKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I+A  + G LS   G+GGG  +VP L     +  + +G   +  + +A+G ++G +   S
Sbjct: 142 IIAGVVIGALSSFAGIGGGAFIVPFLNSRGFEMKRAIGTSSACGVLLAIGATIGFMLSGS 201

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + M     G + +      +    +T+   ++  + +  S L KAF  F   + ++M 
Sbjct: 202 RFADMPAYSIGFVYLPAFIGIVCASVVTSRFGAMAANRLPVSVLKKAFGAFLCCVAVMMF 261

Query: 143 KR 144
            +
Sbjct: 262 FK 263


>gi|288940500|ref|YP_003442740.1| hypothetical protein Alvin_0761 [Allochromatium vinosum DSM 180]
 gi|288895872|gb|ADC61708.1| protein of unknown function DUF81 [Allochromatium vinosum DSM 180]
          Length = 267

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 78/254 (30%), Positives = 116/254 (45%), Gaps = 3/254 (1%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLM-GIDDSICMHVAMGTSLG 76
            +V  +   +    LSG ++GLFGVGGG +MVP L   F  + G+      H+A+GTSL 
Sbjct: 1   MIVIELLAYLAIGALSGVMAGLFGVGGGAIMVPALMLLFGALGGVGGDWLAHLAVGTSLA 60

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I  T   S + H RH  +   I+      + I  +  + +   +   +L + FA+F   
Sbjct: 61  TIIGTGAASTLAHHRHRGVRWDIVWPLAPGIVIGALAGAALAGWIPSLWLQRIFAVFLTY 120

Query: 137 MGILMLKRD--RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
           +GI +L      +      P        G   G LS  +G+GGG  T   +  +G  + +
Sbjct: 121 VGIRLLAAPATSITASHSLPGRVGLTTVGGGIGLLSSLVGIGGGTLTVPFLSRHGLGMRQ 180

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A ATSA     IA    L  +  GWG  GLP +S GFV   AV  +L  S+ I PL  +L
Sbjct: 181 AVATSAACGLPIAVAGALGFMLVGWGRPGLPAFSTGFVYWPAVAAMLAASMPIAPLGARL 240

Query: 255 SYMIGKKYLTIGFS 268
           ++ +    L   F 
Sbjct: 241 AHTLPVPLLKRLFG 254


>gi|261856150|ref|YP_003263433.1| hypothetical protein Hneap_1556 [Halothiobacillus neapolitanus c2]
 gi|261836619|gb|ACX96386.1| protein of unknown function DUF81 [Halothiobacillus neapolitanus
           c2]
          Length = 263

 Score =  196 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 1/232 (0%)

Query: 48  MVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +VPVL   F L+G+ D    +H+A+GTSL  I  +S+ S   H ++  +   +       
Sbjct: 29  VVPVLLFLFPLIGLGDSPHLVHLAIGTSLATILFSSMASIYTHHKNKGVLWDVFIRIAPG 88

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + I +++ S +   +    L K F +  +L+ + M         R  P       +G+  
Sbjct: 89  IVIGSILGSTIAHLLPGEILKKVFGVLEILIALQMAFGRNPAPTRTLPSGVPLSFFGVSV 148

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +   +G+GGG  T    ++   +   A ATSA +    A    +  I +GWG   LP 
Sbjct: 149 GAVGTIMGMGGGALTTPFFMWCNVAARNAMATSAAIGLPNALAGAIGYIVTGWGQPDLPS 208

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           WS+G++ + A+L I+  S+   P+   L++ +  K L   F++++       
Sbjct: 209 WSIGYIYLPALLGIVIPSLFFAPIGATLTHRLPAKLLKRFFAIMLVLLGLNM 260



 Score = 40.4 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 44/129 (34%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +       G +  + G+GGG +  P             ++    AM TS  +  P ++  
Sbjct: 141 LSFFGVSVGAVGTIMGMGGGALTTPFFMWC--------NVAARNAMATSAAIGLPNALAG 192

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G I +  L   +        + + +   +    L + FAI 
Sbjct: 193 AIGYIVTGWGQPDLPSWSIGYIYLPALLGIVIPSLFFAPIGATLTHRLPAKLLKRFFAIM 252

Query: 134 CLLMGILML 142
            +L+G+ ML
Sbjct: 253 LVLLGLNML 261


>gi|260430556|ref|ZP_05784529.1| membrane protein [Citreicella sp. SE45]
 gi|260418585|gb|EEX11842.1| membrane protein [Citreicella sp. SE45]
          Length = 276

 Score =  196 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 87/271 (32%), Positives = 147/271 (54%), Gaps = 2/271 (0%)

Query: 10  LMVFLSKDCVVDYICL-IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMH 68
           +   L+    + ++CL +IVA  L G L+GLFGVGGG + VPV  + F  M     I M 
Sbjct: 1   MNALLADPGTLTFLCLGLIVAGALIGLLAGLFGVGGGAISVPVFYETFLFMDAPADIAMP 60

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +A+GTSL +I PTS++S   H   G ++M  L+ W   +    ++ S +  +        
Sbjct: 61  LAVGTSLAMIIPTSILSARTHAEKGALDMPHLRAWALPVTAGVLIGSAVARYAPAEVFQI 120

Query: 129 AFAIFCLLMGILMLKRDRLYCERK-FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
            FA         ML   + +  R   P   ++ ++G + G LS  +G+GGG  +NL++  
Sbjct: 121 VFAAVAGFNAFKMLFVKKPWLIRDGLPGEPLRGLYGAIVGLLSALMGIGGGAISNLILTL 180

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           +G ++++A ATSAGV  LIA P  +  + +GWG   LPP ++GFV++ A+++ LP ++L 
Sbjct: 181 HGWTMHRAVATSAGVGLLIAIPGAIGYVIAGWGKPDLPPDAVGFVSLAALVLTLPTALLT 240

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           T    +L++ + ++ LT  F + +   +  F
Sbjct: 241 TRRGARLAHALSRETLTRLFGLFLAIVAIRF 271


>gi|197118209|ref|YP_002138636.1| membrane protein [Geobacter bemidjiensis Bem]
 gi|197087569|gb|ACH38840.1| membrane protein DUF81, putative [Geobacter bemidjiensis Bem]
          Length = 263

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 1/213 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VPVL+  F    + ++  +H+A+GTSL  I  TSV S   H R G +   +++     
Sbjct: 28  VIVPVLTFIFTAQHLPEAHILHLALGTSLASIMFTSVSSLRAHHRRGAVEWTVVRRISAG 87

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + + T   S + S +   FL   F +F   +   ML   +   +R+ P        G + 
Sbjct: 88  ILVGTFAGSWVASQLSTRFLKGFFVVFLYYVAAQMLLNIKPKAQRQLPGLAAMSGVGGII 147

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  +G+GGG  T   +++   +I +A  TS+ V   IA       + +GW    LP 
Sbjct: 148 GGVSSLVGIGGGTMTVPFLVWCNVAIPRAIGTSSAVGFPIALAGAAGYLVNGWS-ADLPQ 206

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +SLGFV + A+  I   SI+  PL  KL++ + 
Sbjct: 207 YSLGFVYLPALAGISAASIITAPLGAKLAHSLP 239



 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 19/117 (16%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH--------- 89
           L G+GGG + VP L           ++ +  A+GTS  V  P ++     +         
Sbjct: 153 LVGIGGGTMTVPFLVWC--------NVAIPRAIGTSSAVGFPIALAGAAGYLVNGWSADL 204

Query: 90  --RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                G + +  L        IT  + + +   +    L K FA+  L+MG  M+  
Sbjct: 205 PQYSLGFVYLPALAGISAASIITAPLGAKLAHSLPIDLLKKFFALLLLVMGTKMMLS 261


>gi|90418089|ref|ZP_01226001.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337761|gb|EAS51412.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 274

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 90/270 (33%), Positives = 153/270 (56%), Gaps = 1/270 (0%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  +    ++ Y+  +  A+  +G L+GLFG+GGG + VPVL + F+ +G+   + MH+A
Sbjct: 1   MQPIEASALIPYLLPLFGAAAAAGFLAGLFGIGGGAIFVPVLYQTFEELGVSHEVSMHLA 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +G+SL +I PTS+ S + H R G ++ ++LK+W+  +P+  +  +++ +      L   F
Sbjct: 61  IGSSLAIIVPTSIRSLVSHWRRGVVDWRLLKEWVVAIPLGAIAGAMVAAAASSGELRGIF 120

Query: 131 AIFCLLMGILMLKRDRLYC-ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
           A   L++G+ ++         ++ P    + + G + G LS  +G+GGG+  N  M  Y 
Sbjct: 121 AALALVLGLKLVFGKVPMSFGKQLPGLAGRSVAGFLIGLLSSLMGIGGGVLNNTFMTLYN 180

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             + +A ATSAGV  LI+ P LL     GWG   LP +S+GFV++ AVL+I P SIL  P
Sbjct: 181 RPMIEAVATSAGVGVLISVPGLLSYAIGGWGDPLLPAYSIGFVSLAAVLLIAPASILAVP 240

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           L   L++ + ++ L +GF   +   +  FA
Sbjct: 241 LGAALAHRLTRRQLELGFGAFLLIVAARFA 270



 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 46/129 (35%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA FL G LS L G+GGG     VL+  F  +       M  A+ TS GV    SV   +
Sbjct: 152 VAGFLIGLLSSLMGIGGG-----VLNNTFMTLYNRP---MIEAVATSAGVGVLISVPGLL 203

Query: 88  EH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            +               G +++  +        +   + + +   + +  L   F  F L
Sbjct: 204 SYAIGGWGDPLLPAYSIGFVSLAAVLLIAPASILAVPLGAALAHRLTRRQLELGFGAFLL 263

Query: 136 LMGILMLKR 144
           ++       
Sbjct: 264 IVAARFAYS 272


>gi|294139695|ref|YP_003555673.1| hypothetical protein SVI_0924 [Shewanella violacea DSS12]
 gi|293326164|dbj|BAJ00895.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 262

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 126/255 (49%), Gaps = 1/255 (0%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            ++   + G ++GL G+GGG++ VPVL      +G D  +  HVA+ TSL  I  TS+ S
Sbjct: 6   CLLLGGVIGFMAGLLGIGGGIIAVPVLLYLLPWVGFDVGVLPHVAIATSLAAIILTSLSS 65

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H + G I   +LK  +  L + ++   ++ + +    L  +FA+F + M   M+   
Sbjct: 66  ARAHHKQGNIPWPLLKPILPGLILGSLSAGIISTFISADLLQTSFAVFVICMAAQMIFPF 125

Query: 146 RLY-CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
           RL   +++ P   + +    V   ++  +G+GGG+     + + G  +  A   S+    
Sbjct: 126 RLSEADKQMPSTPILFAVSTVIAIIAALMGIGGGVLLIPFLSWCGLQMRNAIGFSSVSGV 185

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
            IA       + SGW ++GLP W+LG+V + A+L I+  S+L+ PL  K + +   K L 
Sbjct: 186 FIALFGSASYVLSGWNVSGLPEWTLGYVYLPALLGIVITSVLMAPLGVKAASIWPTKILK 245

Query: 265 IGFSMIMFTTSFVFA 279
             F++++       A
Sbjct: 246 RIFALLLIVVGLKLA 260


>gi|149925520|ref|ZP_01913784.1| hypothetical protein LMED105_04832 [Limnobacter sp. MED105]
 gi|149825637|gb|EDM84845.1| hypothetical protein LMED105_04832 [Limnobacter sp. MED105]
          Length = 278

 Score =  195 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 63/226 (27%), Positives = 106/226 (46%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L  AF+L  +       +A+GTS+  I  TSV S   H  HG +   ++K++I  + +
Sbjct: 45  PALVWAFKLAALPGQWHFRLALGTSMATILFTSVSSVRSHHLHGAVRWDVVKNFIPGILL 104

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T+  + +  HV  +FL   FA+F  L    M    +    R  P    +       G  
Sbjct: 105 GTLFGTFLARHVSTTFLIVFFALFMGLASFQMFFEYKPKPGRVLPGRNGQMGVATFIGTA 164

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  + VGGG  T   +++   SI  A  T++ +   IA    +  I++GW   GLP  SL
Sbjct: 165 SSLVAVGGGALTVPFLVWCNVSIKNAIGTASAMGFPIALGGTIGFIFNGWTAPGLPTGSL 224

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           GFV   A+L  +  S+L+ P   + ++++    L   F++++F  +
Sbjct: 225 GFVYTPALLFTVVASVLLAPWGAQAAHILPAPLLRKVFAVVVFGIA 270



 Score = 37.7 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 4/118 (3%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +   GT S L  VGGG + VP L          +G   ++   +A+G ++G I      
Sbjct: 157 VATFIGTASSLVAVGGGALTVPFLVWCNVSIKNAIGTASAMGFPIALGGTIGFIFNGWTA 216

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +     G +    L   +    +     +     +    L K FA+    + + M+
Sbjct: 217 PGLPTGSLGFVYTPALLFTVVASVLLAPWGAQAAHILPAPLLRKVFAVVVFGIAVNMM 274


>gi|114564107|ref|YP_751621.1| hypothetical protein Sfri_2943 [Shewanella frigidimarina NCIMB 400]
 gi|114335400|gb|ABI72782.1| protein of unknown function DUF81 [Shewanella frigidimarina NCIMB
           400]
          Length = 266

 Score =  195 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 68/253 (26%), Positives = 120/253 (47%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D ++    + +V   + G L+GL G+GGGL++VP L      +GI  +   HVA+ TSL 
Sbjct: 2   DSLLQVFLICLVLGSVVGFLAGLLGIGGGLIIVPALLYILPSVGISSTQITHVAIATSLA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I  TS+ S   H + G I  ++ K     + I ++ ++ +   +    L +AFAIF +L
Sbjct: 62  SIILTSMSSATAHHKRGNIPWELFKPIFPGIVIGSLASAFVSEQIASDDLQQAFAIFVVL 121

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           M + M    ++      P   V  +       ++G +G+GGG+     + + G  + +A 
Sbjct: 122 MAVQMAFPFKVKTGGSMPSFAVLLVISTAIALIAGLMGIGGGVLLVPFLSYCGLQMRQAV 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S+    LIA    +  I +G+ +  LP  S+GF+ + A++ I+  S+L  P   K + 
Sbjct: 182 GFSSATGMLIAVSGTIGYIIAGFDVPNLPEGSVGFIYLPALIGIIISSMLCAPFGVKAAS 241

Query: 257 MIGKKYLTIGFSM 269
                 L   F+ 
Sbjct: 242 TWPTPVLKKIFAC 254


>gi|329918092|ref|ZP_08276520.1| hypothetical protein IMCC9480_2868 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327544443|gb|EGF30008.1| hypothetical protein IMCC9480_2868 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 267

 Score =  195 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 121/255 (47%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I   +V     G  +GL G+GGG+++VP ++           + +HVA+ TSL  I  
Sbjct: 4   SLIIAFLVLGSAVGFAAGLLGIGGGMLLVPFITALLTYKDFPKELIIHVAIATSLATIMF 63

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TSV S + H R G +   I+K     + I + V   +   ++ + L   FA+F       
Sbjct: 64  TSVSSVVAHHRRGAVRWDIVKLLAPGILIGSWVGPWIGQQMNSATLAMFFAVFVTFSAAQ 123

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           ML   +    R  P N   +  G   G L+G +G GGG  +   M +    I+ A ATSA
Sbjct: 124 MLFDKKPSGTRGLPGNAGMFAAGGGIGVLAGLVGAGGGFVSVPFMTWCQVKIHNAVATSA 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +   IA    L  IY G  +  LP  SLG++ + A+L+I   S++  PL  K ++ +  
Sbjct: 184 ALGFPIALAGTLSNIYFGLSIPDLPSGSLGYIYLPALLVISMASVVTAPLGAKAAHALPV 243

Query: 261 KYLTIGFSMIMFTTS 275
           K L   F++++F+ +
Sbjct: 244 KTLKKIFAVMLFSLA 258



 Score = 35.8 bits (82), Expect = 7.2,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 42/133 (31%), Gaps = 33/133 (24%)

Query: 37  SGLFGVGGG-------------LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           +G+F  GGG              V VP ++           + +H A+ TS  +  P ++
Sbjct: 140 AGMFAAGGGIGVLAGLVGAGGGFVSVPFMTWC--------QVKIHNAVATSAALGFPIAL 191

Query: 84  MSFMEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
              + +               G I +  L        +T  + +     +    L K FA
Sbjct: 192 AGTLSNIYFGLSIPDLPSGSLGYIYLPALLVISMASVVTAPLGAKAAHALPVKTLKKIFA 251

Query: 132 IFCLLMGILMLKR 144
           +    +   M  +
Sbjct: 252 VMLFSLAGYMFYK 264


>gi|134096092|ref|YP_001101167.1| hypothetical protein HEAR2933 [Herminiimonas arsenicoxydans]
 gi|133739995|emb|CAL63046.1| Putative permease [Herminiimonas arsenicoxydans]
          Length = 287

 Score =  195 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 66/282 (23%), Positives = 127/282 (45%), Gaps = 14/282 (4%)

Query: 11  MVFLSKDCVVD--------------YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAF 56
           M  +  D VV+              +    ++A    G L+GL G+GGG+ +VP+++  F
Sbjct: 1   MHAIDDDEVVECNSGRCNHRGACMMWFLAYVMAGAFVGVLAGLLGIGGGMTLVPIIAALF 60

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
                     +H+A+ T +  IA TS  S  EH +   ++  I+K     L I +++ + 
Sbjct: 61  AAQHFAPDHVVHMALATCMASIAFTSGSSVREHLKFDGVDFNIVKRMTPGLVIGSLLATS 120

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
           + + + +  L  +FA+        ++   +    R  P     ++ GMV G ++G +  G
Sbjct: 121 VSAWIPQRHLALSFAVIVFFGATQIMLNKKPQAARPLPAAGPLFLVGMVIGIIAGLVSAG 180

Query: 177 GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G   T   ML+ G  + K   T A +   +A    +  I SGW +  LP  ++GF++I A
Sbjct: 181 GAFLTIPFMLWCGVPMKKTIGTGALMGIPLAVVGTIGYIISGWNVPDLPSDAIGFISITA 240

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++ I+  S++  P   +L+  +    L   F+ +++  +   
Sbjct: 241 LIGIVCGSVVTAPFGARLAQRLPVPILKRIFAGLLYVLAAKM 282



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 46/129 (35%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +   + G ++GL   GG  + +P +            + M   +GT   +  P +V+ 
Sbjct: 163 LFLVGMVIGIIAGLVSAGGAFLTIPFMLWC--------GVPMKKTIGTGALMGIPLAVVG 214

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVT------------SLMISHVDKSFLNKAFAIF 133
            + +   G     +  D I  + IT ++             + +   +    L + FA  
Sbjct: 215 TIGYIISGWNVPDLPSDAIGFISITALIGIVCGSVVTAPFGARLAQRLPVPILKRIFAGL 274

Query: 134 CLLMGILML 142
             ++   ML
Sbjct: 275 LYVLAAKML 283


>gi|257464533|ref|ZP_05628904.1| permease [Actinobacillus minor 202]
 gi|257450193|gb|EEV24236.1| permease [Actinobacillus minor 202]
          Length = 263

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 122/260 (46%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +++     +    + G L+GLFG+GGGL++VP L     L G+     M  A+GTS   I
Sbjct: 1   MIEVFLSCLALGTVVGFLAGLFGIGGGLIIVPSLVYLLPLAGVSPEHLMSAALGTSFSTI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S   H + G ++  + K +I  + I+  +  L+IS +D   ++K FA+  + + 
Sbjct: 61  VITAFSSAQRHHKLGNVDWNVSKVFIPSIMISVFLCGLIISGLDAKLMSKLFAVMVVYLA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           + M+   +   + K        I G + G LS   G+GGG F    +   G  + +A  T
Sbjct: 121 LRMIFSLQKEQKIKPLTTQTTVIAGGIIGALSSVAGIGGGAFIVPFLNGRGLEMKRAIGT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+   A +        I SGW + GLP +SLG+V + A+L I   S   + L    + ++
Sbjct: 181 SSFCGAFLGLSGTFSFIASGWNVEGLPDYSLGYVYLPALLGITLTSYFTSKLGANAANVL 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++++   +   
Sbjct: 241 PVATLKKAFAVMLVVIAINM 260



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A  + G LS + G+GGG  +VP L+           + M  A+GTS    A   +   
Sbjct: 142 VIAGGIIGALSSVAGIGGGAFIVPFLN--------GRGLEMKRAIGTSSFCGAFLGLSGT 193

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
                             G + +  L         T+ + +   + +  + L KAFA+  
Sbjct: 194 FSFIASGWNVEGLPDYSLGYVYLPALLGITLTSYFTSKLGANAANVLPVATLKKAFAVML 253

Query: 135 LLMGILMLKR 144
           +++ I M  +
Sbjct: 254 VVIAINMFLK 263


>gi|165918287|ref|ZP_02218373.1| putative membrane protein [Coxiella burnetii RSA 334]
 gi|165918147|gb|EDR36751.1| putative membrane protein [Coxiella burnetii RSA 334]
          Length = 277

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 77/262 (29%), Positives = 128/262 (48%), Gaps = 3/262 (1%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  L++    ++G L  LFGVGGG+V+VPV    F    +     MH A+GTSL ++ 
Sbjct: 8   IYFALLLLFVGGIAGYLGSLFGVGGGIVLVPVFLTIFPFFHVSHEAVMHNAVGTSLALLV 67

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           P +++S   H + G  +  +LK WI  + I  +   L+I  +  ++L   FA++     +
Sbjct: 68  PNALLSARNHYKRGNFDFPLLKQWIPFILIGAITGILIIKFIPTAYLKILFALYLYASFL 127

Query: 140 L-MLKRDRLYCERKFPDNYVKYIWG--MVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
             +LK+ +       P  +   I G  ++ G  S  LG+GGG F+      Y  SI K+ 
Sbjct: 128 YVILKKGKGNEIEGQPRGWGMRIAGVCVLIGGFSVLLGMGGGTFSIPFCQAYNYSIKKSI 187

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A ++  +  I     +  I SGW   G  P+SLGFVN+ A + ILP  I+ +P   K + 
Sbjct: 188 ALASATAIFIGLIGTIGVIISGWNAPGRAPYSLGFVNLLAFICILPTIIIFSPFGVKTAQ 247

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            +  + L I ++  + T     
Sbjct: 248 RLSLRQLRILYAFFLLTMGLYM 269


>gi|149928010|ref|ZP_01916259.1| hypothetical protein LMED105_14710 [Limnobacter sp. MED105]
 gi|149823306|gb|EDM82540.1| hypothetical protein LMED105_14710 [Limnobacter sp. MED105]
          Length = 278

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 117/230 (50%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   F L+G+D+S+ MHVA+GTSL  I PTS +S   H+  G ++  + K  +  L I
Sbjct: 43  PVLYHLFTLLGVDESVKMHVAVGTSLATIIPTSFISAKSHKAKGNLDEPLFKSLVLPLFI 102

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC-ERKFPDNYVKYIWGMVTGF 168
             V+ S    +V    L+  FA   LL+   M  R +        P +  K I G   G 
Sbjct: 103 GVVIGSFASGYVSGDVLSIVFASIALLVAANMAFRSKAKPVAESLPRSPFKQIMGTFIGG 162

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
            S  +G+GGG  +  ++  +   +++A  T+A +  +I+ P  +  + +GW +   PP +
Sbjct: 163 FSTLMGIGGGTLSVPILNAFNVPMHRAVGTAAAIGMVISIPGAIGFLLNGWNVENTPPLT 222

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +G++N+    +I+P+++ + P+  +++       L + F+  +F T+   
Sbjct: 223 IGYINLIGFALIVPMTMWMAPVGARMASATTAARLKLAFAFFLFITAVRM 272



 Score = 42.0 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +     G  S L G+GGG + VP+L+          ++ MH A+GT+  +    S+   +
Sbjct: 155 IMGTFIGGFSTLMGIGGGTLSVPILNAF--------NVPMHRAVGTAAAIGMVISIPGAI 206

Query: 88  EHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
               +G             IN+      + +      V + M S    + L  AFA F  
Sbjct: 207 GFLLNGWNVENTPPLTIGYINLIGFALIVPMTMWMAPVGARMASATTAARLKLAFAFFLF 266

Query: 136 LMGILMLKR 144
           +  + M   
Sbjct: 267 ITAVRMFYG 275


>gi|255261618|ref|ZP_05340960.1| membrane protein [Thalassiobium sp. R2A62]
 gi|255103953|gb|EET46627.1| membrane protein [Thalassiobium sp. R2A62]
          Length = 274

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AF ++G +    M + + TSL  I  TS+ S M H + G ++  IL+ W   + +
Sbjct: 38  PAFFYAFSVLGYEGPFLMQMCLATSLATIIVTSIRSVMSHNKKGAVDWGILRTWAPGIVV 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-KRDRLYCERKFPDNYVKYIWGMVTGF 168
              +   + S ++   L   F I  L++G  ML  RD        P   V +      G 
Sbjct: 98  GAAIGVTIASSLESGVLQLIFGILALVIGCYMLAGRDTWRLGEAMPKGPVVWAMSGSAGL 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   +M  +G  I++A AT+AG    IA P+++  ++     +  PP+S
Sbjct: 158 LSVLMGIGGGSFGVPMMTLFGVPIHRAVATAAGFGVTIAVPSVIGFMFLDIPSDQTPPFS 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +G VN+ A ++I+  +I+  P   KL++ +  K L   F + +   +   
Sbjct: 218 IGAVNVFAFVLIVSTTIITAPYGAKLAHRMNPKPLKRAFGVFLVLVALNM 267



 Score = 40.8 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 12/119 (10%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH--- 89
           +G LS L G+GGG   VP++     L G+     +  A G  + +  P+ +         
Sbjct: 155 AGLLSVLMGIGGGSFGVPMM----TLFGVPIHRAVATAAGFGVTIAVPSVIGFMFLDIPS 210

Query: 90  -----RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                   G +N+      +    IT    + +   ++   L +AF +F +L+ + ML+
Sbjct: 211 DQTPPFSIGAVNVFAFVLIVSTTIITAPYGAKLAHRMNPKPLKRAFGVFLVLVALNMLR 269


>gi|84499206|ref|ZP_00997494.1| membrane protein [Oceanicola batsensis HTCC2597]
 gi|84392350|gb|EAQ04561.1| membrane protein [Oceanicola batsensis HTCC2597]
          Length = 273

 Score =  194 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AFQ +G D    M + + TSL  I  TS+ S   H R G ++  IL+ W   + I
Sbjct: 37  PAFFYAFQSLGFDGDKLMQLCLATSLATIIVTSLRSVQSHHRKGAVDWDILRGWGPGIAI 96

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V+  L  + +    L   F I  +++G+ + L R         P   V+++   + GF
Sbjct: 97  GAVIGVLAAAALRSDALQALFGILAMVIGLYLSLGRSDWRIAEAMPTGPVRWLLSPLVGF 156

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  YG  I++A AT+AG   +IA P+++  +         PP +
Sbjct: 157 LSVLMGIGGGSFGVPLMTLYGRPIHRAVATAAGFGVIIAVPSVIGFLLVSLPAETRPPLT 216

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +G VN+ A  +++ ++++  PL  +L++      L   F + +   +   
Sbjct: 217 IGAVNLPAFAVVIAMTLITAPLGARLAHATDAGPLKRIFGIFLLLVAANM 266



 Score = 43.9 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 4/117 (3%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           L G LS L G+GGG   VP+++       + +       + +A+ + +G +  +      
Sbjct: 153 LVGFLSVLMGIGGGSFGVPLMTLYGRPIHRAVATAAGFGVIIAVPSVIGFLLVSLPAETR 212

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                G +N+      I +  IT  + + +    D   L + F IF LL+   ML+R
Sbjct: 213 PPLTIGAVNLPAFAVVIAMTLITAPLGARLAHATDAGPLKRIFGIFLLLVAANMLRR 269


>gi|253701036|ref|YP_003022225.1| hypothetical protein GM21_2424 [Geobacter sp. M21]
 gi|251775886|gb|ACT18467.1| protein of unknown function DUF81 [Geobacter sp. M21]
          Length = 263

 Score =  194 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 1/213 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VPVL+  F    + ++  +H+A+GTSL  I  TSV S   H R G +   +++     
Sbjct: 28  VIVPVLTFIFTAQHLPEAHILHLALGTSLASIMFTSVSSLRAHHRRGAVEWTVVRRMSAG 87

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + + T   S + S +   FL   F +F   + + ML   +    R+ P        G V 
Sbjct: 88  ILVGTFSGSWVASQLSTRFLKGFFVVFLYYVALQMLLNIKPKPHRQLPGLTAMSGVGGVI 147

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  +G+GGG  T   +++   ++ +A  TS+ V   IA       + +G     LP 
Sbjct: 148 GGVSSLVGIGGGTMTVPFLVWCNLALPRAIGTSSAVGFPIALAGAAGYLVNGLS-ANLPQ 206

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +SLGFV + A+  I   S++  PL  KL++ + 
Sbjct: 207 YSLGFVYLPALAGISAASMVTAPLGAKLAHSLP 239



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 5/110 (4%)

Query: 39  LFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT 94
           L G+GGG + VP L        + +G   ++   +A+  +        + + +     G 
Sbjct: 153 LVGIGGGTMTVPFLVWCNLALPRAIGTSSAVGFPIALAGA-AGYLVNGLSANLPQYSLGF 211

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +  L        +T  + + +   +    L K FA+  L+MG  ML  
Sbjct: 212 VYLPALAGISAASMVTAPLGAKLAHSLPIDLLKKFFALLLLVMGTKMLLS 261


>gi|307544289|ref|YP_003896768.1| hypothetical protein HELO_1699 [Halomonas elongata DSM 2581]
 gi|307216313|emb|CBV41583.1| K07090 [Halomonas elongata DSM 2581]
          Length = 264

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 121/261 (46%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++      +    ++GTL+GLFG+GGGL++VP L  AF L G+   + MH+A+GTSL  
Sbjct: 2   SILALWLGYLALGGIAGTLAGLFGIGGGLIIVPALVFAFDLQGVAPEVSMHLAVGTSLAT 61

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I  T   S   H R G+++       +  L +  +    +  ++    L   F IF LL+
Sbjct: 62  IVVTGASSAWGHYRRGSVHWAWFLALLPGLMLGAIAGVFVAGNLSGGLLGMLFGIFMLLV 121

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
              ML   R       P      + G V G +S   G+GGG  +   +   GA++ +A  
Sbjct: 122 AARMLLGLRPRPGGLAPGRSAMMLAGGVIGAVSALFGIGGGTLSVPWLSRSGATMTQAVG 181

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS+     IA       I  GW   GLPP +LG+V   A L I+  S+    L   L++ 
Sbjct: 182 TSSVCGLPIALFGTATFIVVGWQAPGLPPGALGYVMWPAFLGIVLASVPCARLGVWLAHR 241

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +  + L + F++++      F
Sbjct: 242 LPARLLRLAFAVLLTGVGLKF 262



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 20/130 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++A  + G +S LFG+GGG + VP LS+            M  A+GTS     P ++  
Sbjct: 143 MMLAGGVIGAVSALFGIGGGTLSVPWLSR--------SGATMTQAVGTSSVCGLPIALFG 194

Query: 86  FMEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
                              G +        +        +   +   +    L  AFA+ 
Sbjct: 195 TATFIVVGWQAPGLPPGALGYVMWPAFLGIVLASVPCARLGVWLAHRLPARLLRLAFAVL 254

Query: 134 CLLMGILMLK 143
              +G+  L 
Sbjct: 255 LTGVGLKFLL 264


>gi|163746888|ref|ZP_02154245.1| membrane protein [Oceanibulbus indolifex HEL-45]
 gi|161380002|gb|EDQ04414.1| membrane protein [Oceanibulbus indolifex HEL-45]
          Length = 273

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 2/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    A Q +G D    M + + TSL  I  TS  S   H + G ++  IL+ W   + +
Sbjct: 38  PAFFYALQSLGYDGPQLMQICLATSLATIIVTSARSVHAHNKKGAVDWDILRSWAPGIML 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V+  L++S +    L   F    L++G+ +   R         P    + I   + GF
Sbjct: 98  GAVLGVLLVSQLRTVTLQAIFGGLALIVGLYLGFGRSEWRLGETMPRGIKRAILSPMVGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  +G  I++A AT+AG   LIA P+++  ++        PP++
Sbjct: 158 LSVLMGIGGGSFGVPLMTLHGRPIHRAVATAAGFGLLIAVPSVIAFLFVDIDQ-NRPPFT 216

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +G VN+ A   ++ ++++  P   +L++ +  K L   F++ +   +   
Sbjct: 217 VGAVNLVAFGTVITMTLITAPWGVRLAHAMDPKPLKRIFAVFLVLVAMNM 266



 Score = 43.5 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 11/128 (8%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            + S + G LS L G+GGG   VP       L G      +  A G  L +  P+ +   
Sbjct: 149 AILSPMVGFLSVLMGIGGGSFGVP----LMTLHGRPIHRAVATAAGFGLLIAVPSVIAFL 204

Query: 87  MEHRRH-------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                        G +N+      I +  IT      +   +D   L + FA+F +L+ +
Sbjct: 205 FVDIDQNRPPFTVGAVNLVAFGTVITMTLITAPWGVRLAHAMDPKPLKRIFAVFLVLVAM 264

Query: 140 LMLKRDRL 147
            ML++   
Sbjct: 265 NMLRKALW 272


>gi|260427856|ref|ZP_05781835.1| membrane protein [Citreicella sp. SE45]
 gi|260422348|gb|EEX15599.1| membrane protein [Citreicella sp. SE45]
          Length = 274

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 67/230 (29%), Positives = 113/230 (49%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P     FQ++G D    M V + TSL  I  TS+ S + H R G ++ +ILK W   + +
Sbjct: 38  PAFFFTFQMLGYDGPQTMQVCLATSLATIIVTSLRSVIGHNRKGAVDWEILKGWAPGIVV 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK-RDRLYCERKFPDNYVKYIWGMVTGF 168
             +V  L  S +  S L   F +  L++G  ML  +       + PD   ++++    GF
Sbjct: 98  GAIVGVLAASALKSSTLQAIFGVLALIIGGYMLLGKTSWRIADRMPDGGKQHLYSPFVGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  +  +I++A AT+AG   LIA P+ +  +         PP++
Sbjct: 158 LSVLMGIGGGSFGVPLMNLHNVAIHRAVATAAGFGVLIAVPSAVGFLMLTIEPGSRPPYT 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           LG VN+   L+++ +++L  PL  K+++ +    L   F   +   +   
Sbjct: 218 LGAVNLPGFLVVIAMTLLTAPLGVKIAHAMNPAPLKRLFGAFLILVALNM 267



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 50/117 (42%), Gaps = 4/117 (3%)

Query: 32  LSGTLSGLFGVGGGLVMVPVL----SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
             G LS L G+GGG   VP++        + +       + +A+ +++G +  T      
Sbjct: 154 FVGFLSVLMGIGGGSFGVPLMNLHNVAIHRAVATAAGFGVLIAVPSAVGFLMLTIEPGSR 213

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                G +N+      I +  +T  +   +   ++ + L + F  F +L+ + ML++
Sbjct: 214 PPYTLGAVNLPGFLVVIAMTLLTAPLGVKIAHAMNPAPLKRLFGAFLILVALNMLRK 270


>gi|94500138|ref|ZP_01306672.1| hypothetical protein RED65_13422 [Oceanobacter sp. RED65]
 gi|94427711|gb|EAT12687.1| hypothetical protein RED65_13422 [Oceanobacter sp. RED65]
          Length = 276

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 79/272 (29%), Positives = 135/272 (49%), Gaps = 3/272 (1%)

Query: 8   FSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
            ++M FLS + +      +I+    +G L+GL GVGGG+V+VPVL   FQ  G+     M
Sbjct: 1   MNIMEFLSSNLMA--FIALIITGIFAGILAGLLGVGGGIVIVPVLFFLFQGFGVSPDSAM 58

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            +A  TSL  I PTS+ S   H + G ++  +LK W F + I  ++ S +++ VD ++L 
Sbjct: 59  LIATATSLATIVPTSISSIRSHHQKGNVDFDLLKYWAFFILIGVLLGSWLVTRVDGTWLT 118

Query: 128 KAFAIFCLLMGILMLKR-DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
             F I   L  + ML R  +    ++ P    +   G   GF S  +G+GGG  +  L+ 
Sbjct: 119 ALFGIIATLSALNMLFRTGKSALFQQLPGTAGQTTMGTSIGFFSSMVGIGGGTLSVPLLT 178

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
            Y    +KA  T+A +  +I+ P  L  +  G      P  ++G VN+   + I+P+++L
Sbjct: 179 LYNYPAHKAVGTAAAIGLIISLPGALTMMVLGSTPIDAPSGTVGLVNLVGFICIVPLTVL 238

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             P+   ++  +    L   F++++  T    
Sbjct: 239 FAPVGASIAARLDATKLKKVFAIVLLFTGLRM 270



 Score = 43.9 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 20/125 (16%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G  S + G+GGG + VP+L+          +   H A+GT+  +    S+   +  
Sbjct: 155 GTSIGFFSSMVGIGGGTLSVPLLTLY--------NYPAHKAVGTAAAIGLIISLPGALTM 206

Query: 90  RRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
              G+            +N+      + +  +   V + + + +D + L K FAI  L  
Sbjct: 207 MVLGSTPIDAPSGTVGLVNLVGFICIVPLTVLFAPVGASIAARLDATKLKKVFAIVLLFT 266

Query: 138 GILML 142
           G+ ML
Sbjct: 267 GLRML 271


>gi|325982313|ref|YP_004294715.1| hypothetical protein NAL212_1679 [Nitrosomonas sp. AL212]
 gi|325531832|gb|ADZ26553.1| protein of unknown function DUF81 [Nitrosomonas sp. AL212]
          Length = 265

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 64/260 (24%), Positives = 122/260 (46%), Gaps = 1/260 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +++  + ++     G  +GL G+GGGL++VPVL   F          MH+A+GT++  I 
Sbjct: 1   MEWWLIYLLTGAFVGFFAGLLGIGGGLILVPVLITVFTAQNFPVDRIMHMALGTTMATII 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ S   H +HG +N +I+++    + + T   + +   +    L+  F IF      
Sbjct: 61  FTSITSLRTHHQHGAVNWQIVRNITPGIFLGTFGGATLAGSMTGQLLSSIFVIFIFYAAT 120

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            ML + R     + P      + G V G LS  + +GGG+ +   +      +  A  T+
Sbjct: 121 QMLLQFRPSPMFQLPGRIGLLLAGGVIGALSSLVAIGGGLLSIPFLTLCKIKLQHAIGTA 180

Query: 200 AGVSALIAFPALLVRIYSGWGLNG-LPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           A +   IA    +  + +G   +  LP  SLG+V++ A++ ++  S+L  PL  +L++  
Sbjct: 181 AAIGFPIALAGTIGYVVNGLIQSDPLPANSLGYVHLPALIWLVSASMLTAPLGARLTHST 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F +++++     
Sbjct: 241 QTAILRTIFVVLLYSLGIRM 260



 Score = 43.1 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 21/132 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++A  + G LS L  +GGGL+ +P L+           I +  A+GT+  +  P ++  
Sbjct: 140 LLLAGGVIGALSSLVAIGGGLLSIPFLTLC--------KIKLQHAIGTAAAIGFPIALAG 191

Query: 86  FMEH-------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            + +                G +++  L   +    +T  + + +      + L   F +
Sbjct: 192 TIGYVVNGLIQSDPLPANSLGYVHLPALIWLVSASMLTAPLGARLTHSTQTAILRTIFVV 251

Query: 133 FCLLMGILMLKR 144
               +GI ML  
Sbjct: 252 LLYSLGIRMLIN 263


>gi|325293298|ref|YP_004279162.1| hypothetical protein AGROH133_07076 [Agrobacterium sp. H13-3]
 gi|325061151|gb|ADY64842.1| hypothetical protein AGROH133_07076 [Agrobacterium sp. H13-3]
          Length = 273

 Score =  193 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 92/240 (38%), Positives = 148/240 (61%), Gaps = 1/240 (0%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
           FG+GGG V+VPV    F L+ + +++ MH+++GTSL +I PTS+ SF+ HR+ G +++ +
Sbjct: 28  FGIGGGAVLVPVFYHVFGLLDVPEAVRMHLSLGTSLAIIVPTSIRSFLTHRQKGAVDIDL 87

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK-RDRLYCERKFPDNYV 158
           LK WI  +P+ T++ S++ +H     L   FA   L +   M+  R   +     P N V
Sbjct: 88  LKGWIVAVPLGTILASVVAAHASSVALRLIFAFIALALAFRMIFNRASWHLGSDLPKNPV 147

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           +++ G   G LSG +GVGGG+  N  M  YG +I++A ATS+GV  LI+ P LL  I++G
Sbjct: 148 RFLVGTGIGLLSGLMGVGGGVMNNTFMTLYGRTIHQAVATSSGVGVLISLPGLLGYIWAG 207

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           WG  GLPP+S GF+N  AV +++PI++++ P   +L++ + KK L   F + +   +  F
Sbjct: 208 WGDAGLPPFSTGFINWIAVALLIPITLVVAPYGARLAHALSKKQLERAFGVFLVFVAAQF 267


>gi|294085721|ref|YP_003552481.1| hypothetical protein SAR116_2154 [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292665296|gb|ADE40397.1| Protein of unknown function DUF81 [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 268

 Score =  193 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 68/252 (26%), Positives = 128/252 (50%), Gaps = 1/252 (0%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
               ++G L+G+ G+GGG+++VPVL   + +M +   I MH A+GTSL  I PTS+ S +
Sbjct: 11  ATGAIAGILAGMLGIGGGIILVPVLFLIYDVMNVPADIIMHAAVGTSLATIIPTSISSAL 70

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            H R  +I++ IL+ W   + +       +  +++ + L   F    +L+ + M+     
Sbjct: 71  AHHRRDSIDLGILRRWSPFIVLGAGSGGFLSQYIESATLTLIFGCLAILVAMNMMMPHTP 130

Query: 148 YCERKFPD-NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
                 P    ++ +     GF S  +G+GGG  +  +M   G  +++A  TSA    +I
Sbjct: 131 KMGTILPKARPLEKLISSFIGFFSALMGIGGGTMSIPVMTALGVPVHRAIGTSAAFGFMI 190

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           A P  L  I+SGW +    P+S GF+N+   +++  +SI   P+ ++L++ +    L   
Sbjct: 191 ALPGALGFIWSGWDVAMRLPYSFGFINLPIAILLFSVSIFTAPMGSRLAHALDPVRLKRA 250

Query: 267 FSMIMFTTSFVF 278
           F++ +  ++   
Sbjct: 251 FALFLIISAARM 262



 Score = 43.1 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + S   G  S L G+GGG + +PV++           + +H A+GTS       ++   +
Sbjct: 145 LISSFIGFFSALMGIGGGTMSIPVMTAL--------GVPVHRAIGTSAAFGFMIALPGAL 196

Query: 88  EH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                            G IN+ I      V   T  + S +   +D   L +AFA+F +
Sbjct: 197 GFIWSGWDVAMRLPYSFGFINLPIAILLFSVSIFTAPMGSRLAHALDPVRLKRAFALFLI 256

Query: 136 LMGILMLKR 144
           +    ML  
Sbjct: 257 ISAARMLYS 265


>gi|83945622|ref|ZP_00957968.1| membrane protein [Oceanicaulis alexandrii HTCC2633]
 gi|83850988|gb|EAP88847.1| membrane protein [Oceanicaulis alexandrii HTCC2633]
          Length = 272

 Score =  193 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 74/262 (28%), Positives = 128/262 (48%), Gaps = 2/262 (0%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++ +I  ++     +G ++GLFG+GGG++MVP L      +G + +  MH A+GTSL V
Sbjct: 4   SLIPFILALLAVGAFAGLIAGLFGIGGGIIMVPALYYVLTGLGYE-AHAMHAAVGTSLMV 62

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I  TS+ S   H + G ++ K+LK W   + +  ++ S +        L   F    LL+
Sbjct: 63  IVATSLRSVAAHAQKGAVDFKVLKTWTPFIVLGALLGSAVADLAPGRALTGLFGAVALLL 122

Query: 138 GILMLK-RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
                  R         P   +K + GM  G LS  +G+GGG+F   LM  +G +I+ A 
Sbjct: 123 SAQFFFGRPDWKLADDLPGQPMKTVLGMTIGILSSLMGIGGGVFGVTLMTLHGKTIHTAV 182

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           AT+AG    I  P  +  + +G       P+S+G+VN+ A + +   ++ + P+   L++
Sbjct: 183 ATAAGFGVAIGLPGAIGFMIAGLDEPARAPFSVGYVNMAAFVTLAASAVFLAPVGANLAH 242

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            +  K L   F++ +   S   
Sbjct: 243 SLNPKRLKQFFAVGLLIMSLNM 264



 Score = 37.7 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 4/120 (3%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS-- 85
           V     G LS L G+GGG+  V +++   + +    +      +   L       +    
Sbjct: 147 VLGMTIGILSSLMGIGGGVFGVTLMTLHGKTIHTAVATAAGFGVAIGLPGAIGFMIAGLD 206

Query: 86  --FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G +NM               V + +   ++   L + FA+  L+M + ML+
Sbjct: 207 EPARAPFSVGYVNMAAFVTLAASAVFLAPVGANLAHSLNPKRLKQFFAVGLLIMSLNMLR 266


>gi|254428040|ref|ZP_05041747.1| conserved domain protein, putative [Alcanivorax sp. DG881]
 gi|196194209|gb|EDX89168.1| conserved domain protein, putative [Alcanivorax sp. DG881]
          Length = 267

 Score =  193 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 4/236 (1%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP L   F  +G  D +   +A+ TSL  I  TS+ +   H + G +   +       +
Sbjct: 30  IVPALIFLFHGLGFPDELVAKMAVATSLSTIIITSISAVRTHHKAGFVRWPVALRLGVGI 89

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN----YVKYIWG 163
            +     + +   +D   L + F +F +L+ + ML   R   +   P          + G
Sbjct: 90  VLGAFAGAFIADAMDGELLARLFGLFAMLIALQMLLAGRKALDESLPQRVPGAPGLGLAG 149

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           ++ G  S   G+GGG  T   + +    + +A A S+     IA    L    +GW    
Sbjct: 150 LLIGTGSAIFGIGGGSLTVPFLSWCRLKMQEAVAISSACGLPIAIAGTLGFAVAGWNEQH 209

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           LP  +LG+V + A   I+  S     L+ +LS+ +    L   F++++F      A
Sbjct: 210 LPDGALGYVFLPATAGIVLTSFPFARLSARLSHRLPSATLKKVFALVLFVLGLKLA 265



 Score = 37.0 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 20/123 (16%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM------ 87
           GT S +FG+GGG + VP LS           + M  A+  S     P ++   +      
Sbjct: 153 GTGSAIFGIGGGSLTVPFLSWC--------RLKMQEAVAISSACGLPIAIAGTLGFAVAG 204

Query: 88  --EHRRHGTINMKILKDWIFVLPITTV----VTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             E          +       + +T+     +++ +   +  + L K FA+   ++G+ +
Sbjct: 205 WNEQHLPDGALGYVFLPATAGIVLTSFPFARLSARLSHRLPSATLKKVFALVLFVLGLKL 264

Query: 142 LKR 144
              
Sbjct: 265 AFG 267


>gi|209694163|ref|YP_002262091.1| integral membrane protein [Aliivibrio salmonicida LFI1238]
 gi|208008114|emb|CAQ78256.1| integral membrane protein [Aliivibrio salmonicida LFI1238]
          Length = 267

 Score =  193 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 75/261 (28%), Positives = 119/261 (45%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            V +   L +    + G ++GL G+GGGL++VP L       GI   I M +A+GTSL  
Sbjct: 4   SVWELFALYLALGSIVGVMAGLLGIGGGLLVVPALLWLLPQAGISPDIVMQMALGTSLAT 63

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I  TS  S + H R G +  K++K     + +   + S     +   +L K F +  LL+
Sbjct: 64  IILTSASSALNHLRLGNVEFKLIKGLAPGVIVGGFLGSYAAELIPSQYLPKVFGVIVLLL 123

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            + ML   +    R  P      I G   G +S   G+GGG  T   + F+G  + KA  
Sbjct: 124 ALQMLLALKFTATRPLPSPLKVGISGGFIGVISSLAGIGGGSLTVPYLNFHGVEMRKAIG 183

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +S+    LIA   ++  I  G  ++ LPP SLG+V + A+  +   SI  T +  KL+  
Sbjct: 184 SSSLCGMLIAMAGMIGFIIHGAQVSDLPPMSLGYVYLPALCGVGLTSIFTTRIGAKLTSY 243

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +    L   F++ +       
Sbjct: 244 LPTPTLKKIFAVFLVFIGTKM 264



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           ++    G +S L G+GGG + VP L+       + +G      M +AM   +G I   + 
Sbjct: 147 ISGGFIGVISSLAGIGGGSLTVPYLNFHGVEMRKAIGSSSLCGMLIAMAGMIGFIIHGAQ 206

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +S +     G + +  L         TT + + + S++    L K FA+F + +G  M  
Sbjct: 207 VSDLPPMSLGYVYLPALCGVGLTSIFTTRIGAKLTSYLPTPTLKKIFAVFLVFIGTKMFL 266

Query: 144 R 144
            
Sbjct: 267 G 267


>gi|170728324|ref|YP_001762350.1| hypothetical protein Swoo_3998 [Shewanella woodyi ATCC 51908]
 gi|169813671|gb|ACA88255.1| protein of unknown function DUF81 [Shewanella woodyi ATCC 51908]
          Length = 268

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 126/259 (48%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D IC  ++   L G  +GLFG+GGG +MVP+L+  F   GI  +  + +A+GTS+  I 
Sbjct: 4   IDVICSFLLLGALVGFAAGLFGIGGGGIMVPMLTAIFLNQGIAMNTVVPLALGTSMAAII 63

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ +   H     I   ++ + +  + + T  ++ + S VD  +L   FA+F   + +
Sbjct: 64  VTSLSNLRAHNAKKGILWPVVTNMLPGIFLGTFASTFIASKVDAFYLALFFALFMAYVSM 123

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            ML    +  +++ P+    ++ G   G +S  + +GGG  T   +      I KA  TS
Sbjct: 124 KMLFSKTVKSDQRIPNTGNMFLAGSGIGAISALVSIGGGSLTVPYLAGRSIEIKKAIGTS 183

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A +   I+    L  +  GW    L  +++G++ + AVL+I   S L  P   KL+Y + 
Sbjct: 184 AAIGLPISVAGTLGYLIHGWNSTSLINYAVGYIYLPAVLLISITSFLTVPYGVKLAYYLP 243

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              L   F++++   S   
Sbjct: 244 VTILKKMFALLLILISLNM 262



 Score = 38.9 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 53/123 (43%), Gaps = 4/123 (3%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVL----SKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           + +A    G +S L  +GGG + VP L     +  + +G   +I + +++  +LG +   
Sbjct: 143 MFLAGSGIGAISALVSIGGGSLTVPYLAGRSIEIKKAIGTSAAIGLPISVAGTLGYLIHG 202

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              + + +   G I +  +        +T      +  ++  + L K FA+  +L+ + M
Sbjct: 203 WNSTSLINYAVGYIYLPAVLLISITSFLTVPYGVKLAYYLPVTILKKMFALLLILISLNM 262

Query: 142 LKR 144
           +  
Sbjct: 263 VIS 265


>gi|15889204|ref|NP_354885.1| hypothetical protein Atu1908 [Agrobacterium tumefaciens str. C58]
 gi|15157027|gb|AAK87670.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 273

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 92/240 (38%), Positives = 147/240 (61%), Gaps = 1/240 (0%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
           FG+GGG V+VPV    F L+ + +++ MH+++GTSL +I PTSV SF+ HR+ G +++ +
Sbjct: 28  FGIGGGAVLVPVFYHVFGLLDVPEAVRMHLSLGTSLAIIVPTSVRSFLTHRQKGAVDIDL 87

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-KRDRLYCERKFPDNYV 158
           LK WI  +P+ T++ S++ ++     L   FA   L +   M+  R         P N  
Sbjct: 88  LKGWIVAVPLGTILASVVAAYASSVALRLIFAFIALALAFRMIVNRASWQLGSDLPKNPA 147

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           +++ G   G LSG +GVGGG+  N  M  YG +I++A ATS+GV  LI+ P LL  I++G
Sbjct: 148 RFLVGTGIGLLSGLMGVGGGVMNNTFMTLYGRTIHQAVATSSGVGVLISLPGLLGYIWAG 207

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           WG  GLPP+S GF+N  AV++++PI++L+ P   +L++ + KK L   F + +   +  F
Sbjct: 208 WGNAGLPPFSTGFINWIAVVLLIPITLLVAPYGVRLAHALSKKQLERAFGVFLVFVAAQF 267


>gi|126640851|ref|YP_001083835.1| hypothetical protein A1S_0795 [Acinetobacter baumannii ATCC 17978]
          Length = 221

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 2/214 (0%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           MH+A+GTSL  I  TS  S   H + G +   + ++    L I + + + +   +    L
Sbjct: 1   MHIAVGTSLATIIVTSFSSVSAHHKKGAVLWPVFRNLAPGLVIGSFLGAGIADLLSGQHL 60

Query: 127 NKAFAIFCLLMGILMLKRDRL--YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
                +F ++M   M K   +     R+ P   ++++ G   G  S   G+GGG  T   
Sbjct: 61  QLLIGVFAVVMAYRMFKGAHVVVDPTRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPY 120

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +  +G  + KA ATSA     IA    +  ++ G   +   P ++G+++I A + I  +S
Sbjct: 121 LNRHGVVMQKAVATSAACGLPIAIAGAIGFMWFGAKEHISVPNTIGYIHIYAFIGISVMS 180

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +   L  K+++ +  + L   F+ ++      F
Sbjct: 181 FVTAKLGAKVAHALSPQMLKKCFACLLVVVGSYF 214



 Score = 43.1 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 20/128 (15%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A    G  S +FG+GGG + VP L++          + M  A+ TS     P ++   + 
Sbjct: 98  AGGGIGIASAIFGIGGGSLTVPYLNR--------HGVVMQKAVATSAACGLPIAIAGAIG 149

Query: 89  HRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
               G             I++        +  +T  + + +   +    L K FA   ++
Sbjct: 150 FMWFGAKEHISVPNTIGYIHIYAFIGISVMSFVTAKLGAKVAHALSPQMLKKCFACLLVV 209

Query: 137 MGILMLKR 144
           +G   + +
Sbjct: 210 VGSYFIYK 217


>gi|253996420|ref|YP_003048484.1| hypothetical protein Mmol_1048 [Methylotenera mobilis JLW8]
 gi|253983099|gb|ACT47957.1| protein of unknown function DUF81 [Methylotenera mobilis JLW8]
          Length = 278

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 5/263 (1%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D I   +      G  +GL G+GGG VMVP+L+  F    +     +H+A+GTS+  I  
Sbjct: 4   DLILTFLALGAFVGLAAGLLGIGGGGVMVPMLTAIFLSQNVPADQVVHLALGTSMACIMV 63

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS+ S   H  +G +   ++K  +  + + T   + + S +    L   FA F   + I 
Sbjct: 64  TSLSSLRAHHANGAVVWPLVKLMVIGVVLGTFSATFIASKISSKALAIFFACFMGYVAIQ 123

Query: 141 MLKRDRL-----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           M    +             +     +  +  G +S  + +GGG  T   + +    I KA
Sbjct: 124 MFSNSKSGQATSTATHHAINRLELMLASIGIGSISAIVSIGGGSITVPYLTWRKIDIKKA 183

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TSA +   ++    L  + SGW      P++ GF+N+ AVL+I   S    P+   L+
Sbjct: 184 IGTSAAIGFPLSIAGSLGYLLSGWSHAASIPYTYGFINLPAVLVISITSFFTAPIGANLT 243

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
             +    L   F++++ T S   
Sbjct: 244 QKLPVAMLKKIFALLLATLSLKM 266



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 55/136 (40%), Gaps = 20/136 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++AS   G++S +  +GGG + VP L+           I +  A+GTS  +  P S+  
Sbjct: 147 LMLASIGIGSISAIVSIGGGSITVPYLTW--------RKIDIKKAIGTSAAIGFPLSIAG 198

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +              +G IN+  +         T  + + +   +  + L K FA+ 
Sbjct: 199 SLGYLLSGWSHAASIPYTYGFINLPAVLVISITSFFTAPIGANLTQKLPVAMLKKIFALL 258

Query: 134 CLLMGILMLKRDRLYC 149
              + + ML   +L  
Sbjct: 259 LATLSLKMLWNLQLLP 274


>gi|163739976|ref|ZP_02147381.1| membrane protein [Phaeobacter gallaeciensis BS107]
 gi|161386721|gb|EDQ11085.1| membrane protein [Phaeobacter gallaeciensis BS107]
          Length = 288

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 111/230 (48%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P     FQ +G      M + + TSL  I  TS+ S M H + G ++  IL+ W   + I
Sbjct: 52  PAFFYVFQTLGYGGDQLMQMCLATSLATIIVTSLRSVMSHNKKGAVDWDILRGWGPGIAI 111

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             ++  ++ S +  + L   F +  L++G  M   R         P    + I   + GF
Sbjct: 112 GAIIGVMVASSLRSTTLQALFGVLALVIGCYMAFGRADWRLGSAMPKGARRMILSPMVGF 171

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  +   I++A AT+AG   +IA P+++  ++     +  PP +
Sbjct: 172 LSVLMGIGGGSFGVPLMSLHATPIHRAVATAAGFGVIIAVPSVIGFLFLPVDPSVRPPLT 231

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +G VN+ A ++++ ++++  P   KL++ +  K L   F++ +   +   
Sbjct: 232 VGAVNLVAFVVVIAMTLITAPWGVKLAHAMDPKPLKRVFAVFLILVALNM 281



 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 20/131 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++ S + G LS L G+GGG   VP++S          +  +H A+ T+ G     +V S 
Sbjct: 163 MILSPMVGFLSVLMGIGGGSFGVPLMSL--------HATPIHRAVATAAGFGVIIAVPSV 214

Query: 87  MEHRRH------------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G +N+      I +  IT      +   +D   L + FA+F 
Sbjct: 215 IGFLFLPVDPSVRPPLTVGAVNLVAFVVVIAMTLITAPWGVKLAHAMDPKPLKRVFAVFL 274

Query: 135 LLMGILMLKRD 145
           +L+ + ML++ 
Sbjct: 275 ILVALNMLRKS 285


>gi|260426351|ref|ZP_05780330.1| membrane protein [Citreicella sp. SE45]
 gi|260420843|gb|EEX14094.1| membrane protein [Citreicella sp. SE45]
          Length = 273

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P     F+ +G      M V + TSL  I  TS+ S   H R G ++ +ILK W   + +
Sbjct: 38  PAFLFTFETLGYGSPQLMQVCLATSLATIVVTSIRSVAAHNRKGAVDWQILKRWAPGIAL 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             +V  L +S +D +FL   F    +++G+     R       + P   ++ +     GF
Sbjct: 98  GALVGVLTVSRLDSAFLQALFGCVAIVIGLYFAFGRRSWRLSDRMPGAGLRELIASGIGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM      +++A AT+AG    IA P++L   +        PP +
Sbjct: 158 LSVLMGIGGGSFAVPLMTLCSVPMHRAVATAAGFGLSIALPSVLAFFFVEIPEPVRPPLT 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           LG VN+GA  + + ++++  PL  +L++ + ++ L   F++ +   +   
Sbjct: 218 LGAVNLGAFAVAISMTLITAPLGARLAHAVEERTLRRTFAVFILVVAANM 267



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 20/130 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +   G LS L G+GGG   VP+++          S+ MH A+ T+ G     ++ S +
Sbjct: 150 LIASGIGFLSVLMGIGGGSFAVPLMTLC--------SVPMHRAVATAAGFGLSIALPSVL 201

Query: 88  EHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                            G +N+      I +  IT  + + +   V++  L + FA+F L
Sbjct: 202 AFFFVEIPEPVRPPLTLGAVNLGAFAVAISMTLITAPLGARLAHAVEERTLRRTFAVFIL 261

Query: 136 LMGILMLKRD 145
           ++   ML++ 
Sbjct: 262 VVAANMLRKS 271


>gi|114319194|ref|YP_740877.1| hypothetical protein Mlg_0028 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114225588|gb|ABI55387.1| protein of unknown function DUF81 [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 269

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 72/248 (29%), Positives = 122/248 (49%), Gaps = 2/248 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I + + A  ++G LSGLFG+GGG+++VPVL   F L  +  S+ MH+A+GTSL  I  T+
Sbjct: 4   ILVYLAAGAVAGLLSGLFGIGGGVIIVPVLLALFALREVPASVIMHMAVGTSLATIVFTA 63

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H R G + + +       + + +V+ +L+   +  + L  AF +F L +G+ + 
Sbjct: 64  ISSVRSHWRRGGVLVPVFLRLAAGMCLGSVLGALIAGQMSGALLKAAFGVFLLALGLQLA 123

Query: 143 KRDRLYCER--KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
                        P   +    G   G +S  LG+ GG  T  L+   G  + +A  TSA
Sbjct: 124 FGRGPRPGPRPATPSALILAPAGSAIGAVSSLLGIAGGAMTVPLLARLGIPMRQAVGTSA 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                IA       + +G+G   LP  ++G+V   A L I+ +S+   PL  +L++ + +
Sbjct: 184 ACGLPIALVGAAAFMATGFGHPDLPQRAIGYVYWPAFLGIIAMSLFTAPLGARLAHRLPQ 243

Query: 261 KYLTIGFS 268
             L   F+
Sbjct: 244 HILQRAFA 251



 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 42/135 (31%), Gaps = 20/135 (14%)

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY--------GASIYKATATSAGVSA 204
             D  V    G V G LSG  G+GGG+    ++L             ++ A  TS     
Sbjct: 1   MLDILVYLAAGAVAGLLSGLFGIGGGVIIVPVLLALFALREVPASVIMHMAVGTSLATIV 60

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
             A  ++               W  G V +   L +     L + L   ++  +    L 
Sbjct: 61  FTAISSV------------RSHWRRGGVLVPVFLRLAAGMCLGSVLGALIAGQMSGALLK 108

Query: 265 IGFSMIMFTTSFVFA 279
             F + +       A
Sbjct: 109 AAFGVFLLALGLQLA 123


>gi|269103433|ref|ZP_06156130.1| hypothetical protein VDA_002859 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163331|gb|EEZ41827.1| hypothetical protein VDA_002859 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 268

 Score =  192 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 70/233 (30%), Positives = 107/233 (45%), Gaps = 1/233 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VP L       GI  ++ MH+A+GTSL  I  TS  S   H R G ++  I+K     
Sbjct: 33  VVVPALVWLLPHAGISSNLVMHIALGTSLASIVLTSGASARNHIRLGNVDYSIVKALAPG 92

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL-YCERKFPDNYVKYIWGMV 165
           + +     S +   V    L K FA   L + I ML   RL   E++ P        G V
Sbjct: 93  VVLGGFGGSFIAEIVPTELLPKIFATIVLTLAIQMLLSMRLGRKEQRLPSTVACASSGAV 152

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            G +S   G+GGG  T   + ++G  + KA   ++   A+IA   ++  I +G G   LP
Sbjct: 153 IGVISSLAGIGGGSLTVPYLSWHGVEMRKAIGCASFAGAMIAIAGMIGFITAGVGSESLP 212

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           P+SLG+V + A+L I+  S++ T     L   +    L   F++ +   S   
Sbjct: 213 PYSLGYVYLPALLGIVTTSVITTRYGAALVSRLPTVTLKKIFAVFLLFISVKM 265



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 4/138 (2%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSIC 66
           M    K+  +        +  + G +S L G+GGG + VP LS       + +G      
Sbjct: 131 MRLGRKEQRLPSTVACASSGAVIGVISSLAGIGGGSLTVPYLSWHGVEMRKAIGCASFAG 190

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
             +A+   +G I        +     G + +  L   +    ITT   + ++S +    L
Sbjct: 191 AMIAIAGMIGFITAGVGSESLPPYSLGYVYLPALLGIVTTSVITTRYGAALVSRLPTVTL 250

Query: 127 NKAFAIFCLLMGILMLKR 144
            K FA+F L + + M   
Sbjct: 251 KKIFAVFLLFISVKMFLG 268


>gi|89054668|ref|YP_510119.1| hypothetical protein Jann_2177 [Jannaschia sp. CCS1]
 gi|88864217|gb|ABD55094.1| protein of unknown function DUF81 [Jannaschia sp. CCS1]
          Length = 274

 Score =  192 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 78/260 (30%), Positives = 136/260 (52%), Gaps = 1/260 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + LI+    ++G ++GL GVGGG+V+VP    AF+ +G      M + + TSL  I 
Sbjct: 8   LPMLALILAIGAMAGVIAGLLGVGGGIVLVPAFFFAFEGLGYSTDGLMQICLATSLATIV 67

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TSV S M H + G ++  IL+ W   + I   +  ++ S +    L   F +  L +G+
Sbjct: 68  VTSVRSVMGHHKKGAVDWDILRAWGPGIAIGAALGVIVASGLRNEVLMAIFGVLGLGVGL 127

Query: 140 LM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
            M L R       + P  +       V GFLS  +G+GGG F   +M  +G +I++A AT
Sbjct: 128 YMALGRSEWRLGDQMPGAFGTIASSPVLGFLSVLMGIGGGSFGVPMMTLFGVAIHRAVAT 187

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +AG   +IA PA++  + +G  +   PP+++G VNI A + ++ ++++ TP   KL++ +
Sbjct: 188 AAGFGVIIAVPAVIGFLLTGSDVANRPPYAVGQVNIVAFVAVIAMTLITTPWGVKLAHAM 247

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
             K L   F++ +   +   
Sbjct: 248 DPKPLKRVFAVFIMIMALNM 267



 Score = 38.9 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I +S + G LS L G+GGG   VP+++           + +H A+ T+ G     +V + 
Sbjct: 149 IASSPVLGFLSVLMGIGGGSFGVPMMTLF--------GVAIHRAVATAAGFGVIIAVPAV 200

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G +N+      I +  ITT     +   +D   L + FA+F 
Sbjct: 201 IGFLLTGSDVANRPPYAVGQVNIVAFVAVIAMTLITTPWGVKLAHAMDPKPLKRVFAVFI 260

Query: 135 LLMGILMLKR 144
           ++M + ML++
Sbjct: 261 MIMALNMLRK 270


>gi|260433273|ref|ZP_05787244.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417101|gb|EEX10360.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 274

 Score =  192 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 109/230 (47%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P     FQ +G      M + + TSL  I  TSV S + H + G ++ +IL+ W   + +
Sbjct: 38  PAFFYTFQTLGYGGPQLMQMCLATSLATIIVTSVRSVLSHNKKGAVDWEILRGWGPGIAL 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             +   ++ S +    L   F I  + +G  +   +         P    + +   + GF
Sbjct: 98  GALAGVMVASALRTEALQALFGILGMGIGAYLGFGKSEWRLGDAMPGGLRRVLISPMVGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  Y   I++A AT+AG   +IA P+++  ++     +  PP++
Sbjct: 158 LSVLMGIGGGSFGVPLMSLYNTPIHRAVATAAGFGVIIAVPSVIGFLFLPIAPDYRPPFT 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +G VN+ A  +++ ++++  P   KL++ +  K L   F++ +   +   
Sbjct: 218 IGAVNLVAFGVVVAMTMITAPWGVKLAHAMDPKPLKRVFAVFLTLVALNM 267



 Score = 40.1 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 20/124 (16%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH--- 89
            G LS L G+GGG   VP++S          +  +H A+ T+ G     +V S +     
Sbjct: 155 VGFLSVLMGIGGGSFGVPLMSLY--------NTPIHRAVATAAGFGVIIAVPSVIGFLFL 206

Query: 90  ---------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                       G +N+      + +  IT      +   +D   L + FA+F  L+ + 
Sbjct: 207 PIAPDYRPPFTIGAVNLVAFGVVVAMTMITAPWGVKLAHAMDPKPLKRVFAVFLTLVALN 266

Query: 141 MLKR 144
           ML++
Sbjct: 267 MLRK 270


>gi|145589361|ref|YP_001155958.1| hypothetical protein Pnuc_1178 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047767|gb|ABP34394.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 272

 Score =  192 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 75/257 (29%), Positives = 132/257 (51%), Gaps = 1/257 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  +++   LSG L+GL G+GGG+++VP++   F  +G +++I MH+A+ T +  +  T+
Sbjct: 6   IAWLMLGGSLSGFLAGLLGIGGGVILVPLMILIFGRLGFNENILMHMAIATGMASVLFTT 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMGILM 141
             + M H++ G IN K++      L +  VV        ++ ++L+  F+IF L     M
Sbjct: 66  SSAVMAHQKRGNINWKLVIALSPGLVLGAVVGGGKFFDVINGAWLSLGFSIFMLYSSTQM 125

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +     +  R  P  +  + +G++TG ++  LG GG   T   M++     + A A S+G
Sbjct: 126 ILNRSPHAARALPGTFGLFAFGVLTGVIASLLGAGGAFITVPFMIWCNIKPHNAMANSSG 185

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           +   IA  + L  IY GWG   LP +SLG+V + A+L I+  S+L  PL  ++   +   
Sbjct: 186 LGFPIAASSTLGYIYGGWGNASLPEYSLGYVYVPALLCIVITSMLAAPLGARVVSKLEAP 245

Query: 262 YLTIGFSMIMFTTSFVF 278
            L   F   +F  +   
Sbjct: 246 RLKRIFGFTLFLVALFM 262



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 47/125 (37%), Gaps = 4/125 (3%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKA----FQLMGIDDSICMHVAMGTSLGVIAPT 81
           +     L+G ++ L G GG  + VP +          M     +   +A  ++LG I   
Sbjct: 143 LFAFGVLTGVIASLLGAGGAFITVPFMIWCNIKPHNAMANSSGLGFPIAASSTLGYIYGG 202

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              + +     G + +  L   +    +   + + ++S ++   L + F     L+ + M
Sbjct: 203 WGNASLPEYSLGYVYVPALLCIVITSMLAAPLGARVVSKLEAPRLKRIFGFTLFLVALFM 262

Query: 142 LKRDR 146
           L   R
Sbjct: 263 LNESR 267


>gi|54307784|ref|YP_128804.1| hypothetical protein PBPRA0579 [Photobacterium profundum SS9]
 gi|46912207|emb|CAG19002.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 267

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 66/231 (28%), Positives = 110/231 (47%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP L     L GID+S+ MH+A+ TSL  I  TS  S   H + G I+  I+K     +
Sbjct: 34  VVPALVWLLPLAGIDNSLVMHMALATSLASIVLTSGASARNHIKRGNIDYSIVKSMAPGI 93

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            +  +  S++   V    L K FA   LL+ + ML   R+  +R  P +      G V G
Sbjct: 94  VLGGLGGSVIAEMVPTELLPKIFATIVLLLALQMLLSMRMTSQRPIPSSIACACSGGVIG 153

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S   G+GGG  T   + ++G  + +A   ++   A+IA   ++  I+SG     LPP 
Sbjct: 154 VISSLAGIGGGSLTVPYLSWHGVEMRRAIGCASLSGAIIAVAGMVGFIFSGLNEEALPPM 213

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           S+G+V + A++ I+  S++ T     L+  +    L   F++ +       
Sbjct: 214 SIGYVYLPALIGIVSTSVITTRYGAALASRLPTMTLKKIFAIFLLFIGSKM 264



 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 4/125 (3%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIA 79
                +  + G +S L G+GGG + VP LS       + +G        +A+   +G I 
Sbjct: 143 IACACSGGVIGVISSLAGIGGGSLTVPYLSWHGVEMRRAIGCASLSGAIIAVAGMVGFIF 202

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                  +     G + +  L   +    ITT   + + S +    L K FAIF L +G 
Sbjct: 203 SGLNEEALPPMSIGYVYLPALIGIVSTSVITTRYGAALASRLPTMTLKKIFAIFLLFIGS 262

Query: 140 LMLKR 144
            M   
Sbjct: 263 KMFLG 267


>gi|163743187|ref|ZP_02150569.1| membrane protein [Phaeobacter gallaeciensis 2.10]
 gi|161383604|gb|EDQ07991.1| membrane protein [Phaeobacter gallaeciensis 2.10]
          Length = 288

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P     FQ +G      M + + TSL  I  TS+ S M H + G ++  IL+ W   + I
Sbjct: 52  PAFFYVFQTLGYGGDQLMQMCLATSLATIIVTSLRSVMSHNKKGAVDWDILRGWGPGIAI 111

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             ++   + S +  + L   F +  L++G  M   R         P    + I   + GF
Sbjct: 112 GAIIGVTVASSLRSTTLQALFGVLALVIGCYMAFGRADWRLGSAMPKGARRMILSPMVGF 171

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  +   I++A AT+AG   +IA P+++  ++        PP +
Sbjct: 172 LSVLMGIGGGSFGVPLMSLHATPIHRAVATAAGFGVIIAVPSVIGFLFLPVEAAVRPPLT 231

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +G VN+ A ++++ ++++  P   KL++ +  K L   F++ +   +   
Sbjct: 232 VGAVNLVAFVVVIAMTLITAPWGVKLAHAMDPKPLKRVFAVFLILVALNM 281



 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 20/131 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++ S + G LS L G+GGG   VP++S          +  +H A+ T+ G     +V S 
Sbjct: 163 MILSPMVGFLSVLMGIGGGSFGVPLMSL--------HATPIHRAVATAAGFGVIIAVPSV 214

Query: 87  MEHRRH------------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G +N+      I +  IT      +   +D   L + FA+F 
Sbjct: 215 IGFLFLPVEAAVRPPLTVGAVNLVAFVVVIAMTLITAPWGVKLAHAMDPKPLKRVFAVFL 274

Query: 135 LLMGILMLKRD 145
           +L+ + ML++ 
Sbjct: 275 ILVALNMLRKS 285


>gi|77360412|ref|YP_339987.1| hypothetical protein PSHAa1469 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76875323|emb|CAI86544.1| conserved protein of unknown function [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 276

 Score =  191 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   FQ  G+     M +A  TSL  I PTS+ S   H + G ++  +LK W   + I
Sbjct: 41  PVLFFLFQSFGVSPESAMLIATATSLATIVPTSISSIRSHNKKGNVDFDLLKRWAAFILI 100

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR-DRLYCERKFPDNYVKYIWGMVTGF 168
             ++ S +++ VD   L   F    LL  + ML R  +    +K P    + + G   GF
Sbjct: 101 GVLLGSWLVTRVDGKLLTVLFGAIALLSALNMLFRTGKSALYQKLPGTVGQSVMGAFIGF 160

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG  +  L+  Y    +KA  T+A +  +I+ P  L  +  G      P  +
Sbjct: 161 LSSMVGIGGGTISVPLLTLYNYPAHKAVGTAAAIGLIISLPGALTMLILGSTPIDAPAGT 220

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            G VN+     I+P+++L  P+   L+  +    L   F+ ++  T    
Sbjct: 221 FGLVNLFGFACIVPLTVLFAPVGASLAAKLDASKLKKIFACVLLITGLRM 270



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V     G LS + G+GGG + VP+L+          +   H A+GT+  +    S+   +
Sbjct: 153 VMGAFIGFLSSMVGIGGGTISVPLLTLY--------NYPAHKAVGTAAAIGLIISLPGAL 204

Query: 88  EHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                G+            +N+      + +  +   V + + + +D S L K FA   L
Sbjct: 205 TMLILGSTPIDAPAGTFGLVNLFGFACIVPLTVLFAPVGASLAAKLDASKLKKIFACVLL 264

Query: 136 LMGILMLKR 144
           + G+ ML +
Sbjct: 265 ITGLRMLGQ 273


>gi|328545124|ref|YP_004305233.1| hypothetical protein [polymorphum gilvum SL003B-26A1]
 gi|326414866|gb|ADZ71929.1| Conserved domain protein, putative [Polymorphum gilvum SL003B-26A1]
          Length = 275

 Score =  191 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 72/251 (28%), Positives = 127/251 (50%), Gaps = 1/251 (0%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
              ++G  +GL GVGGG+V+VPVL   F  +GI+ ++ MH+A+GTSL  I  T   S + 
Sbjct: 19  TGVVAGLTAGLLGVGGGIVIVPVLYYMFTALGIEQAVLMHLAVGTSLATIVATGTSSALA 78

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-KRDRL 147
           H R G+++M +LK W   +    +  + +  ++    L   F +  L +   ML +R+  
Sbjct: 79  HHRRGSVDMALLKRWWLPIAAGVLAGATLAGNLSGGALTLVFGVVALAVAANMLLRREGS 138

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
               + P   ++   G   G +S  +G+GGG     ++  +   I  A  T+A +  +IA
Sbjct: 139 ALAERLPGTPLREALGFFIGSVSVMMGIGGGTLGVPILTLFSYPIRMAVGTAAAIGLIIA 198

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
            P  L+ ++ G  +   PP SLG+VN+    +I+P S+   PL  ++++ I    L + F
Sbjct: 199 VPGTLMSVWYGLDVPNRPPLSLGYVNLVGFFLIIPASVYAAPLGARIAHAIPPARLRLVF 258

Query: 268 SMIMFTTSFVF 278
           ++ +  T    
Sbjct: 259 ALFLGFTGARM 269



 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 20/127 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
            F  G++S + G+GGG + VP+L+          S  + +A+GT+  +    +V   +  
Sbjct: 154 GFFIGSVSVMMGIGGGTLGVPILTLF--------SYPIRMAVGTAAAIGLIIAVPGTLMS 205

Query: 90  ------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G +N+      I        + + +   +  + L   FA+F    
Sbjct: 206 VWYGLDVPNRPPLSLGYVNLVGFFLIIPASVYAAPLGARIAHAIPPARLRLVFALFLGFT 265

Query: 138 GILMLKR 144
           G  M+  
Sbjct: 266 GARMIYG 272


>gi|90580570|ref|ZP_01236375.1| hypothetical protein VAS14_07569 [Vibrio angustum S14]
 gi|90438228|gb|EAS63414.1| hypothetical protein VAS14_07569 [Photobacterium angustum S14]
          Length = 267

 Score =  191 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 106/229 (46%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       GI   + MH+A+ TSL  I  TS+ S   H + G I+  ++K     +  
Sbjct: 36  PALVWLLPKAGIASHLVMHIALATSLASIVMTSMASARNHFKLGNIDFSVVKTLAPGIIA 95

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
             +  S++   +   +L K FA+  L + I ML   ++   +  P++      G + G +
Sbjct: 96  GGLGGSVVAEIIPSHYLPKIFAVIVLCLAIQMLLSMKVINNKPLPNSLACVSSGGIIGLI 155

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S   G+GGG  T   + +YG  + +A  T++ V  LIA   ++  IY+G G   LP +S+
Sbjct: 156 SSLAGIGGGSLTVPYLSYYGIEMRRAIGTASLVGFLIAVSGMIGFIYAGVGSESLPAFSV 215

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V + A+  I   S++ T     L   +    L   F++++   S   
Sbjct: 216 GYVYLPALFGIAATSMIATRYGAALVSRLPTPTLKKLFAVLLLVISIKM 264



 Score = 43.5 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 4/125 (3%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIA 79
              + +  + G +S L G+GGG + VP LS       + +G    +   +A+   +G I 
Sbjct: 143 LACVSSGGIIGLISSLAGIGGGSLTVPYLSYYGIEMRRAIGTASLVGFLIAVSGMIGFIY 202

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                  +     G + +  L        I T   + ++S +    L K FA+  L++ I
Sbjct: 203 AGVGSESLPAFSVGYVYLPALFGIAATSMIATRYGAALVSRLPTPTLKKLFAVLLLVISI 262

Query: 140 LMLKR 144
            M   
Sbjct: 263 KMFLS 267


>gi|312114497|ref|YP_004012093.1| hypothetical protein Rvan_1747 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311219626|gb|ADP70994.1| protein of unknown function DUF81 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 281

 Score =  191 bits (486), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 80/272 (29%), Positives = 141/272 (51%), Gaps = 1/272 (0%)

Query: 8   FSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
             L+  L    + +    +++   ++G L+GL G+GGG V VPVL + F+L+G+D+SI M
Sbjct: 2   LDLVQHLPWYQIAELSIALLIGGIITGFLAGLLGIGGGAVSVPVLYELFRLVGVDESIIM 61

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            V + TSL +I PT++ S   H +HG + M++++     +    V+   + S    SFL 
Sbjct: 62  RVCVATSLAIIIPTAINSVRSHNKHGAVVMEVIRRLGPWVVAGAVLGVFIASRAPSSFLK 121

Query: 128 KAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
             FA  C+ +   +   +     +   P      + G   G +S  +G+GGG +    M 
Sbjct: 122 AVFAASCIFIASRLAFGKSEPNPDAALPPAPWNLVAGFGIGLISTLIGIGGGAYVTAYMK 181

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           F G  I++A  T++G   +IA PA +  I  GW +  LPP S G+V++   +++ P+S+L
Sbjct: 182 FLGWPIHQAVGTASGFGPIIAIPATIGYIVEGWNVAALPPLSAGYVSLLGFIVLGPVSVL 241

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             PL  K+++ + ++ L I F   +   +  F
Sbjct: 242 AAPLGAKVAHRLSRRTLEITFMSFLLFIAGRF 273


>gi|254475496|ref|ZP_05088882.1| membrane protein [Ruegeria sp. R11]
 gi|214029739|gb|EEB70574.1| membrane protein [Ruegeria sp. R11]
          Length = 288

 Score =  191 bits (486), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 111/230 (48%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P     FQ +G      M + + TSL  I  TSV S + H + G ++  IL+ W   + +
Sbjct: 52  PAFFYVFQTLGYGGDQLMQMCLATSLATIIVTSVRSVLSHNKKGAVDWDILRGWGPGIAV 111

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             ++   + + +  + L   F +  L++G+ M   R       + P    + +   + GF
Sbjct: 112 GAIIGVTVAASLRSTTLQALFGVLALVIGLYMAFGRADWRLGSEMPKGLRRIVLSPMVGF 171

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  +   I++A AT+AG   +IA P+++  ++        PP +
Sbjct: 172 LSVLMGIGGGSFGVPLMSLHATPIHRAVATAAGFGVIIAVPSVIGFLFLPIDAAARPPLT 231

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +G VN+ A ++++ ++++  P   KL++ +  K L   F++ +   +   
Sbjct: 232 VGAVNLVAFVVVIAMTLITAPWGVKLAHAMDPKPLKRVFAIFLILVALNM 281



 Score = 40.8 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 20/131 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IV S + G LS L G+GGG   VP++S          +  +H A+ T+ G     +V S 
Sbjct: 163 IVLSPMVGFLSVLMGIGGGSFGVPLMSL--------HATPIHRAVATAAGFGVIIAVPSV 214

Query: 87  MEHRRH------------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G +N+      I +  IT      +   +D   L + FAIF 
Sbjct: 215 IGFLFLPIDAAARPPLTVGAVNLVAFVVVIAMTLITAPWGVKLAHAMDPKPLKRVFAIFL 274

Query: 135 LLMGILMLKRD 145
           +L+ + ML++ 
Sbjct: 275 ILVALNMLRKS 285


>gi|16605593|emb|CAC81936.1| hypothetical integral membrane protein [Vibrio salmonicida]
          Length = 279

 Score =  191 bits (486), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 1/228 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   FQ  G+     M +A  TSL  I PTS+ S   H + G ++  +LK W   + I
Sbjct: 41  PVLFFLFQSFGVSPESSMLIATATSLATIVPTSISSIRSHNKKGNVDFDLLKRWAAFILI 100

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR-DRLYCERKFPDNYVKYIWGMVTGF 168
             ++ S +++ VD   L   F    LL  + ML R  +    +K P    + + G   GF
Sbjct: 101 GVLLGSWLVTRVDGKLLTVLFGAIALLSALNMLFRTGKSALYQKLPGKVGQSVMGAFIGF 160

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG  +  L+  Y    +KA  T+A +  +I+ P  L  +  G      P  +
Sbjct: 161 LSSMVGIGGGTISVPLLTLYNYPAHKAVGTAAAIGLIISLPGALTMLILGSTPIDAPAGT 220

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            G VN+     I+P+++L  P+   L+  +    L   F+ ++  T  
Sbjct: 221 FGLVNLFGFACIVPLTVLFAPVGASLAAKLDASKLKKIFACVLLITGL 268


>gi|89072545|ref|ZP_01159117.1| hypothetical protein SKA34_18509 [Photobacterium sp. SKA34]
 gi|89051649|gb|EAR57102.1| hypothetical protein SKA34_18509 [Photobacterium sp. SKA34]
          Length = 267

 Score =  191 bits (486), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 62/229 (27%), Positives = 106/229 (46%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       GI   + MH+A+ TSL  I  TS+ S   H + G I+  ++K     + +
Sbjct: 36  PALVWLLPKAGIVSHLVMHIALATSLASIVMTSMASARNHFKLGNIDFSVVKILAPGIIV 95

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
             +  S++   +   +L K FA+  L + I ML   ++   +  P+       G + G +
Sbjct: 96  GGLGGSIVAEIIPSDYLPKIFAVIVLCLAIQMLLSMKVINSKPLPNPLACVSSGGIIGLI 155

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S   G+GGG  T   + +YG  + +A  TS+ V  LIA   ++  IY+G G   LP +S+
Sbjct: 156 SSLAGIGGGSLTVPYLSYYGIEMRRAIGTSSLVGFLIAVSGMIGFIYAGAGSEALPAFSV 215

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V + A+  I   S++ T     L   +    L   F++++   S   
Sbjct: 216 GYVYLPALFGIAATSMIATRYGAALVSRLPTPTLKKLFAVLLLVISIKM 264



 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 4/125 (3%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIA 79
              + +  + G +S L G+GGG + VP LS       + +G    +   +A+   +G I 
Sbjct: 143 LACVSSGGIIGLISSLAGIGGGSLTVPYLSYYGIEMRRAIGTSSLVGFLIAVSGMIGFIY 202

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +    +     G + +  L        I T   + ++S +    L K FA+  L++ I
Sbjct: 203 AGAGSEALPAFSVGYVYLPALFGIAATSMIATRYGAALVSRLPTPTLKKLFAVLLLVISI 262

Query: 140 LMLKR 144
            M   
Sbjct: 263 KMFLS 267


>gi|83954175|ref|ZP_00962895.1| membrane protein [Sulfitobacter sp. NAS-14.1]
 gi|83841212|gb|EAP80382.1| membrane protein [Sulfitobacter sp. NAS-14.1]
          Length = 273

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 2/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AF+ +G D    M + + TSL  I  TS+ S   H + G ++  ILK W   + I
Sbjct: 38  PAFFYAFRALGYDSPQLMQMCLATSLATIIVTSLRSVHSHNKKGAVDWAILKTWAPGIVI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             ++  L+++ +  S L   F    L++G+ M   R      +  P    +       GF
Sbjct: 98  GAIIGMLVVAQLRTSVLQGIFGGLALVVGLYMAFGRAHWRLGQAMPRGAARAALSPSVGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  +   I++A AT+AG   LIA P+++  +         PP +
Sbjct: 158 LSVLMGIGGGSFGVPLMSLFNVPIHRAVATAAGFGVLIAVPSVIGFLLVD-AAPNSPPLT 216

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +G VN+    I++ ++++  PL  +L++ +  K L   F++ +   +   
Sbjct: 217 VGAVNLPTFAIVIAMTLITAPLGVRLAHAMDPKPLKRVFAVFLILVALNM 266



 Score = 43.1 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 19/124 (15%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
            G LS L G+GGG   VP++S          ++ +H A+ T+ G     +V S +     
Sbjct: 155 VGFLSVLMGIGGGSFGVPLMSLF--------NVPIHRAVATAAGFGVLIAVPSVIGFLLV 206

Query: 93  -----------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                      G +N+      I +  IT  +   +   +D   L + FA+F +L+ + M
Sbjct: 207 DAAPNSPPLTVGAVNLPTFAIVIAMTLITAPLGVRLAHAMDPKPLKRVFAVFLILVALNM 266

Query: 142 LKRD 145
           L++ 
Sbjct: 267 LRKS 270


>gi|315122484|ref|YP_004062973.1| hypothetical protein CKC_03680 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495886|gb|ADR52485.1| hypothetical protein CKC_03680 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 260

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 186/260 (71%), Positives = 226/260 (86%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +DYI  II+ASF+SG  SG+FGVGGGL MVP+L+K FQLMG+DDSI  +VAMGTSLGVIA
Sbjct: 1   MDYIYYIIIASFISGAFSGIFGVGGGLAMVPILNKVFQLMGVDDSISTYVAMGTSLGVIA 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           PTS MSFMEHRRH  I+MKI+KDWI V+P+T +VTS+M++H+D+SFLNK+F+IFC L+G 
Sbjct: 61  PTSFMSFMEHRRHSEIDMKIVKDWIIVIPVTVIVTSIMVTHIDQSFLNKSFSIFCSLIGC 120

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
           LML +DR   ++ FPDNY+KY WG+V GFLSG+LGVGGG+F  +LMLFYG+SIYKATA S
Sbjct: 121 LMLVKDRFCYKKSFPDNYLKYFWGVVIGFLSGSLGVGGGVFCTILMLFYGSSIYKATAIS 180

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           + VS LI+FP +LVRIYSGWG+ GLPP S+GFVNIGA+  ILPISIL+TP  TKLSYMIG
Sbjct: 181 SAVSVLISFPGVLVRIYSGWGVEGLPPLSIGFVNIGAIFFILPISILVTPFFTKLSYMIG 240

Query: 260 KKYLTIGFSMIMFTTSFVFA 279
           KKYL+IGFSM+MFTTSF+FA
Sbjct: 241 KKYLSIGFSMLMFTTSFLFA 260


>gi|254486433|ref|ZP_05099638.1| membrane protein [Roseobacter sp. GAI101]
 gi|214043302|gb|EEB83940.1| membrane protein [Roseobacter sp. GAI101]
          Length = 273

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 79/261 (30%), Positives = 133/261 (50%), Gaps = 2/261 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +++ I LI+V    +G L+GL GVGGG+V+VP    AFQ +G D    M + + TSL  I
Sbjct: 7   LIEMIVLIMVIGAFAGVLAGLLGVGGGIVLVPAFFYAFQTLGYDGPQLMQMCLATSLATI 66

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS+ S   H + G ++  IL+ W   + I  V+  L+++ +  + L   F    L++G
Sbjct: 67  IVTSLRSVHSHNKKGAVDWAILRTWAPGIVIGAVIGMLVVAQLRTNVLQGIFGALALIVG 126

Query: 139 ILM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           + M   R      +  P    +       GFLS  +G+GGG F   LM  +   I++A A
Sbjct: 127 LYMAFGRADWRLGQAMPTGVARAALSPSVGFLSVLMGIGGGSFGVPLMSLFNVVIHRAVA 186

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T+AG   LIA PA++  +         PP+++G VN+    I++ ++++  PL  KL++ 
Sbjct: 187 TAAGFGVLIAVPAVIGFLMVD-AAPNSPPYTVGAVNLPTFAIVIAMTLITAPLGVKLAHA 245

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +  K L   F++ +   +   
Sbjct: 246 MDPKPLKRVFAVFLVFVALNM 266



 Score = 42.8 bits (100), Expect = 0.057,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 19/124 (15%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH--- 89
            G LS L G+GGG   VP++S          ++ +H A+ T+ G     +V + +     
Sbjct: 155 VGFLSVLMGIGGGSFGVPLMSLF--------NVVIHRAVATAAGFGVLIAVPAVIGFLMV 206

Query: 90  --------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                      G +N+      I +  IT  +   +   +D   L + FA+F + + + M
Sbjct: 207 DAAPNSPPYTVGAVNLPTFAIVIAMTLITAPLGVKLAHAMDPKPLKRVFAVFLVFVALNM 266

Query: 142 LKRD 145
           +++ 
Sbjct: 267 IRKS 270


>gi|254293953|ref|YP_003059976.1| hypothetical protein Hbal_1591 [Hirschia baltica ATCC 49814]
 gi|254042484|gb|ACT59279.1| protein of unknown function DUF81 [Hirschia baltica ATCC 49814]
          Length = 274

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 2/238 (0%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           VGGG+++VP L   F  +G      MHV++GTSL  I  TS+ S + H   G ++  ILK
Sbjct: 31  VGGGIIIVPALYLTFSSLGF-AETAMHVSVGTSLATIIATSIRSVLSHNAKGAVDWNILK 89

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-MLKRDRLYCERKFPDNYVKY 160
            W   + +     S + + +    L   F     L+    +  R         P   + +
Sbjct: 90  LWGPFIILGAFAGSFLAAILSGRALTIFFGAVAFLLAAQLIFGRPSWKLASDIPSGPIAW 149

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
              +  G  S  +G+GGG+F    M+ YG SI++A  TSAG  ALI  PA++  + +GW 
Sbjct: 150 FISITIGLCSSLMGIGGGVFGVTTMVLYGRSIHQAIGTSAGFGALIGIPAVVGYVINGWY 209

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +  LPP S+G++N+   L+I  ++    P+   +++ +    L   F +++  T+   
Sbjct: 210 VENLPPISIGYLNLPGFLLIALMTTSFAPIGAWIAHGLDAVRLRKIFGLLLICTAINM 267


>gi|307246830|ref|ZP_07528896.1| hypothetical protein appser1_20210 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307255814|ref|ZP_07537616.1| hypothetical protein appser9_20360 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307260266|ref|ZP_07541974.1| hypothetical protein appser11_20480 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306852301|gb|EFM84540.1| hypothetical protein appser1_20210 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306861277|gb|EFM93269.1| hypothetical protein appser9_20360 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306865713|gb|EFM97593.1| hypothetical protein appser11_20480 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 258

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/253 (27%), Positives = 118/253 (46%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +V     G L+GLFG+GGGL++VP L     L G+     M  A+GTS   I  T+  S
Sbjct: 3   CLVVGSAVGFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTIVVTAFSS 62

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H + G +++++ K +I  L ++  +  L +S++D   ++K FA+  L +   ML   
Sbjct: 63  AQRHHKLGNVDVQVSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLAARMLFSL 122

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
           +   E K        + G V G LS   G+ GG F    +   G  + +A  TS+   A 
Sbjct: 123 KKTPEIKPLTTQSTIVAGGVIGALSSMAGIAGGAFIVPFLNSRGLEMKRAIGTSSFCGAF 182

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           +     +  I SGW +  +P +SLG+V + A+  I   S   + L    + ++    L  
Sbjct: 183 LGLSGTISFIASGWNVETMPDYSLGYVYLPALFGITLTSYFTSKLGANAANVLPVATLKK 242

Query: 266 GFSMIMFTTSFVF 278
            F++++   +   
Sbjct: 243 AFAVMLVAIAINM 255



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IVA  + G LS + G+ GG  +VP L+           + M  A+GTS    A   +   
Sbjct: 137 IVAGGVIGALSSMAGIAGGAFIVPFLN--------SRGLEMKRAIGTSSFCGAFLGLSGT 188

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G + +  L         T+ + +   + +  + L KAFA+  
Sbjct: 189 ISFIASGWNVETMPDYSLGYVYLPALFGITLTSYFTSKLGANAANVLPVATLKKAFAVML 248

Query: 135 LLMGILMLKR 144
           + + I M  +
Sbjct: 249 VAIAINMFVK 258


>gi|152998147|ref|YP_001342982.1| hypothetical protein Mmwyl1_4151 [Marinomonas sp. MWYL1]
 gi|150839071|gb|ABR73047.1| protein of unknown function DUF81 [Marinomonas sp. MWYL1]
          Length = 260

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 61/212 (28%), Positives = 98/212 (46%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL  +F L G    +  H+A+GTSL  I  TS+ S + H + G +  +++      + 
Sbjct: 29  VPVLIFSFTLQGFSGEVLTHLAVGTSLSAIFFTSINSVLAHHKKGAVEWRMVIWLGAGIL 88

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
             + +  +  S++  + L +   +F LLM + M    R   + +     V  + G+V G+
Sbjct: 89  FGSSLGGVTASYIPGANLQQIIGVFSLLMSLQMALNWRPKGQGQGLTKPVMSVAGVVIGW 148

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S   G+GGG      + + G  I KA ATSA     IA    L  I  GW    LP  S
Sbjct: 149 VSAIFGIGGGSLMVPFLSWKGVDIKKAVATSAACGLPIALSGTLSFIVIGWNHTLLPSKS 208

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGK 260
           LGFV + A+  I  +S+        L++ +  
Sbjct: 209 LGFVYLPALAGIALMSMFSARFGALLAHKLNP 240



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 53/130 (40%), Gaps = 20/130 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ VA  + G +S +FG+GGG +MVP LS           + +  A+ TS     P ++ 
Sbjct: 138 VMSVAGVVIGWVSAIFGIGGGSLMVPFLSW--------KGVDIKKAVATSAACGLPIALS 189

Query: 85  SFMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
             +              +  G + +  L     +   +    +L+   ++   L + FA+
Sbjct: 190 GTLSFIVIGWNHTLLPSKSLGFVYLPALAGIALMSMFSARFGALLAHKLNPLMLRRLFAL 249

Query: 133 FCLLMGILML 142
              ++G+  L
Sbjct: 250 LLFVVGVNFL 259


>gi|78485755|ref|YP_391680.1| hypothetical protein Tcr_1412 [Thiomicrospira crunogena XCL-2]
 gi|78364041|gb|ABB42006.1| Conserved hypothetical protein with DUF81 [Thiomicrospira crunogena
           XCL-2]
          Length = 268

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 67/231 (29%), Positives = 116/231 (50%), Gaps = 2/231 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L   F  + ID SI M +A+GTSL  I  TS+MS   H + G I+  ++K W+  + I
Sbjct: 35  PMLYHIFIYLNIDISIAMPLAIGTSLSTIVVTSIMSARSHHKKGGIDWDLVKVWLPFVII 94

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR--LYCERKFPDNYVKYIWGMVTG 167
              + +   + +D   L   F +  L++ + M+   R  L   ++ P    + I+  + G
Sbjct: 95  GVFIGAFSANFIDGVTLKVMFGVLLLVISVHMIISIRRSLVIAKQLPSFPGQPIFATLIG 154

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
             S  LG+GGG     L+  +   I+KA +T++    +I+ PA L  I+ GW +  LP  
Sbjct: 155 TFSSILGIGGGTLMVPLLTLFSYPIHKAVSTASLFGLVISIPATLGYIFIGWDVPNLPTG 214

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           S G+VN    + ++P++++  PL  KL+Y +  K L   F++ +       
Sbjct: 215 STGYVNWLGFIALVPMTMVFAPLGVKLAYFLNVKQLKTAFAIFLALVGIKM 265



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 20/128 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + + L GT S + G+GGG +MVP+L+          S  +H A+ T+       S+ + +
Sbjct: 148 IFATLIGTFSSILGIGGGTLMVPLLTLF--------SYPIHKAVSTASLFGLVISIPATL 199

Query: 88  EHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            +               G +N       + +  +   +   +   ++   L  AFAIF  
Sbjct: 200 GYIFIGWDVPNLPTGSTGYVNWLGFIALVPMTMVFAPLGVKLAYFLNVKQLKTAFAIFLA 259

Query: 136 LMGILMLK 143
           L+GI ML 
Sbjct: 260 LVGIKMLL 267


>gi|56697212|ref|YP_167577.1| membrane protein [Ruegeria pomeroyi DSS-3]
 gi|56678949|gb|AAV95615.1| membrane protein [Ruegeria pomeroyi DSS-3]
          Length = 274

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 111/230 (48%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AFQ +G      M + + TSL  I  TS+ S + H + G ++ +IL+ W   + +
Sbjct: 38  PAFFYAFQTLGYGGPQLMQMCLATSLATIIVTSLRSVLSHNKKGAVDWQILRGWGPGIAV 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V+  ++ + +    L   F +  +++G  + L R         P    + +   + GF
Sbjct: 98  GAVLGVMVAASLRSVALQALFGVLGIVIGAYLGLGRAHWRLGEAMPGGLRRMVLSPIVGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  Y   I++A AT+AG   +IA P++L  +         PP +
Sbjct: 158 LSVLMGIGGGSFGVPLMSLYNTPIHRAVATAAGFGVIIAVPSVLGFLLLQIDPAQRPPLT 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +G VN+ A  +++ ++++ TP   KL++ +  K L   F++ +   +   
Sbjct: 218 VGAVNLVAFGVVICMTLITTPWGVKLAHAMDPKPLKRIFAVFLTLVALNM 267



 Score = 40.1 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 20/125 (16%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           + G LS L G+GGG   VP++S          +  +H A+ T+ G     +V S +    
Sbjct: 154 IVGFLSVLMGIGGGSFGVPLMSLY--------NTPIHRAVATAAGFGVIIAVPSVLGFLL 205

Query: 92  H------------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                        G +N+      I +  ITT     +   +D   L + FA+F  L+ +
Sbjct: 206 LQIDPAQRPPLTVGAVNLVAFGVVICMTLITTPWGVKLAHAMDPKPLKRIFAVFLTLVAL 265

Query: 140 LMLKR 144
            ML++
Sbjct: 266 NMLRK 270


>gi|148982261|ref|ZP_01816680.1| hypothetical protein VSWAT3_23914 [Vibrionales bacterium SWAT-3]
 gi|145960573|gb|EDK25928.1| hypothetical protein VSWAT3_23914 [Vibrionales bacterium SWAT-3]
          Length = 246

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 61/243 (25%), Positives = 111/243 (45%), Gaps = 3/243 (1%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           + G+GGGL++VPVLS     + +      +  A+ TSL  I  TS  S + H ++G +  
Sbjct: 1   MLGIGGGLIIVPVLSSILLYLDVLPSDQVVVAAIATSLASILFTSTSSALAHHKNGNVPW 60

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC--ERKFPD 155
            +    +  + +  +V+  M + + +  +   FA+  +L+ I M    +     ERK P+
Sbjct: 61  DLAPWIMLGVALGALVSGFMAALLPEKVVRIVFAVSVVLIAIKMFLSSKSDAPKERKLPN 120

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
             +  +   +TG LS  +G+GGG+    L+ F+   + KA   ++    +IA    +  I
Sbjct: 121 KGLLTVLTTITGGLSAMIGIGGGVLLVPLLTFFSVDMKKAIGCASACGIVIALFGSIGYI 180

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            SG     L     GFV + A+L I+  S    PL  K +  +    +   FS+++   +
Sbjct: 181 TSGSSHFALTDGFAGFVYLPALLGIVCTSWFTAPLGAKATNHLPVPTIKKIFSVLLVIIA 240

Query: 276 FVF 278
              
Sbjct: 241 VSM 243



 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 60/124 (48%), Gaps = 4/124 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAP 80
           L+ V + ++G LS + G+GGG+++VP+L+       + +G   +  + +A+  S+G I  
Sbjct: 123 LLTVLTTITGGLSAMIGIGGGVLLVPLLTFFSVDMKKAIGCASACGIVIALFGSIGYITS 182

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S    +     G + +  L   +     T  + +   +H+    + K F++  +++ + 
Sbjct: 183 GSSHFALTDGFAGFVYLPALLGIVCTSWFTAPLGAKATNHLPVPTIKKIFSVLLVIIAVS 242

Query: 141 MLKR 144
           M+ R
Sbjct: 243 MVTR 246


>gi|322515436|ref|ZP_08068426.1| permease [Actinobacillus ureae ATCC 25976]
 gi|322118527|gb|EFX90762.1| permease [Actinobacillus ureae ATCC 25976]
          Length = 263

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 120/260 (46%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +++     +    + G L+GLFG+GGGL++VP L     + G+     M  A+GTS   I
Sbjct: 1   MIEVFLSCLALGTVVGFLAGLFGIGGGLIIVPSLVYLLPMAGVTPENLMSAALGTSFSTI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S   H + G ++  + K +I  + I+  +  L+IS +D   ++K FAI  + + 
Sbjct: 61  VITAFSSAQRHHKLGNVDWNVSKIFIPSIMISVFLAGLVISGLDAKLMSKLFAIMVIYLA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             M+   +   + K        I G V G LS   G+GGG F    +   G  + +A  T
Sbjct: 121 GRMIFSLKKEQKIKPLTTQGTIIAGGVIGALSSVAGIGGGAFIVPFLNSRGLEMKRAIGT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+   A +     +  I SGW +  +P +SLG+V + A+  I   S   + L    + ++
Sbjct: 181 SSFCGAFLGLSGTVSFIASGWNVASMPDYSLGYVYLPALFGITLTSYFTSKLGANAANVL 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++++   +   
Sbjct: 241 PVATLKKAFAVMLVAIAINM 260



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 50/130 (38%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+A  + G LS + G+GGG  +VP L+           + M  A+GTS    A   +   
Sbjct: 142 IIAGGVIGALSSVAGIGGGAFIVPFLN--------SRGLEMKRAIGTSSFCGAFLGLSGT 193

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G + +  L         T+ + +   + +  + L KAFA+  
Sbjct: 194 VSFIASGWNVASMPDYSLGYVYLPALFGITLTSYFTSKLGANAANVLPVATLKKAFAVML 253

Query: 135 LLMGILMLKR 144
           + + I M  +
Sbjct: 254 VAIAINMFLK 263


>gi|165977340|ref|YP_001652933.1| permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|307262396|ref|ZP_07544042.1| hypothetical protein appser12_19370 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|165877441|gb|ABY70489.1| predicted permease [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
 gi|306867944|gb|EFM99774.1| hypothetical protein appser12_19370 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 263

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 121/260 (46%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +++     +V     G L+GLFG+GGGL++VP L     L G+     M  A+GTS   I
Sbjct: 1   MIEVFLSCLVVGSAVGFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S   H + G +++ + K +I  L ++  +  L +S++D   ++K FA+  L + 
Sbjct: 61  VVTAFSSAQRHHKLGNVDVLVSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             ML   +   E K        + G V G LS   G+ GG F    +   G  + +A  T
Sbjct: 121 ARMLFSLKKTPEIKPLTTQSTIVAGGVIGALSSMAGIAGGAFIVPFLNSRGLEMKRAIGT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+   A +     +  I SGW +  +P +SLG+V + A+L I   S   + L    + ++
Sbjct: 181 SSFCGAFLGLSGTISFIASGWNVETMPDYSLGYVYLPALLGITLTSYFTSKLGANAANVL 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++++   +   
Sbjct: 241 PVATLKKAFAVMLVAIAINM 260



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IVA  + G LS + G+ GG  +VP L+           + M  A+GTS    A   +   
Sbjct: 142 IVAGGVIGALSSMAGIAGGAFIVPFLN--------SRGLEMKRAIGTSSFCGAFLGLSGT 193

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G + +  L         T+ + +   + +  + L KAFA+  
Sbjct: 194 ISFIASGWNVETMPDYSLGYVYLPALLGITLTSYFTSKLGANAANVLPVATLKKAFAVML 253

Query: 135 LLMGILMLKR 144
           + + I M  +
Sbjct: 254 VAIAINMFVK 263


>gi|296271745|ref|YP_003654376.1| hypothetical protein Arnit_0204 [Arcobacter nitrofigilis DSM 7299]
 gi|296095920|gb|ADG91870.1| protein of unknown function DUF81 [Arcobacter nitrofigilis DSM
           7299]
          Length = 268

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 65/231 (28%), Positives = 120/231 (51%), Gaps = 2/231 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L   F  + ID ++ + +++GTSL  I  TS+MS   H + G I+  + K WI ++ I
Sbjct: 35  PMLYHIFIYLNIDITVAIPLSIGTSLSTIVVTSIMSARSHHKKGGIDWDLTKRWIPLVII 94

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC--ERKFPDNYVKYIWGMVTG 167
             ++ S    ++D S L   F I  +++ + M+          ++ P N+ + I+G++ G
Sbjct: 95  GVLIGSFSSKYIDASTLKFMFGILLVVVSLNMIISSFKSIIIAKQLPGNFGQSIFGLLLG 154

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
             +  LG+GGG     L+  +   I+KA +T++    +I+ PA +  I  GWG   LP  
Sbjct: 155 GFASLLGIGGGTLMVPLLTLFSYPIHKAVSTASIFGLVISIPATIGYIIVGWGAPNLPVG 214

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           S G+VN    + ++P++++  PL  KL+Y +  K L + F++ +       
Sbjct: 215 STGYVNWIGFIALVPMTMIFAPLGVKLAYRLNVKQLKVAFAVFLACVGVKM 265



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 20/128 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +   L G  + L G+GGG +MVP+L+          S  +H A+ T+       S+ + +
Sbjct: 148 IFGLLLGGFASLLGIGGGTLMVPLLTLF--------SYPIHKAVSTASIFGLVISIPATI 199

Query: 88  EHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            +               G +N       + +  I   +   +   ++   L  AFA+F  
Sbjct: 200 GYIIVGWGAPNLPVGSTGYVNWIGFIALVPMTMIFAPLGVKLAYRLNVKQLKVAFAVFLA 259

Query: 136 LMGILMLK 143
            +G+ ML 
Sbjct: 260 CVGVKMLL 267


>gi|332533365|ref|ZP_08409231.1| hypothetical protein PH505_ao00790 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332037247|gb|EGI73703.1| hypothetical protein PH505_ao00790 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 274

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 1/258 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  +I     +G L+GLFGVGGG+V+VPVL    Q  G+     M +A  TSL  I PT
Sbjct: 10  IIVALIATGVFAGILAGLFGVGGGIVIVPVLYFLLQGFGVSPESAMMIATATSLATIVPT 69

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H   G I++ ++K W   + +  VV S +   +  + L   FA   +L+ + M
Sbjct: 70  SLSSIRSHHSKGNIDLALIKYWAPFILVMAVVGSYLAHSIRGNALVLMFACIAILVSLNM 129

Query: 142 LKR-DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           L R       ++ P  + + +   + G LS  +G+GGG     ++  +    + A  T+A
Sbjct: 130 LFRAGAPALVKQLPGKFGQGVMASIVGGLSVMIGIGGGTIGVPMLNAFNVRAHVAVGTAA 189

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
               LIA P ++  +  G      P  + G VN+ A  +I+P++IL  P+  K+   + +
Sbjct: 190 VFGLLIALPGVITLLSIGTTPTDAPLGTWGLVNLPAFFLIIPLTILFAPIGVKIGSKLDQ 249

Query: 261 KYLTIGFSMIMFTTSFVF 278
           K L   F++++  T    
Sbjct: 250 KQLKRAFAVVLMITGIRM 267



 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 12/131 (9%)

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF----YGASIYKATATSAGVSALIA 207
           ++P        G+  G L+G  GVGGGI    ++ F    +G S   A   +   S    
Sbjct: 7   QWPIIVALIATGVFAGILAGLFGVGGGIVIVPVLYFLLQGFGVSPESAMMIATATSLATI 66

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
            P  L  I            S G +++  +    P  +++  + + L++ I    L + F
Sbjct: 67  VPTSLSSI--------RSHHSKGNIDLALIKYWAPFILVMAVVGSYLAHSIRGNALVLMF 118

Query: 268 SMIMFTTSFVF 278
           + I    S   
Sbjct: 119 ACIAILVSLNM 129


>gi|332991674|gb|AEF01729.1| membrane protein [Alteromonas sp. SN2]
          Length = 273

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 4/262 (1%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++ ++  + +   ++G  +GLFG GGG V+VP L   F          + VA+GTSL  
Sbjct: 4   ELLWFVVTLCITGAIAGITAGLFGNGGGFVVVPALLAVFPFFTPPSQELVKVAIGTSLAS 63

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I  +S  S M H + G ++  ILK W   + +  +    + S      L   FA   LL 
Sbjct: 64  IVVSSTRSVMAHHKKGAVDFDILKSWSIWIVLGVIGGIYIASSTSSDGLTVVFAAGVLLY 123

Query: 138 GILMLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            I  L  +   R       P+   K +   V G  S  LG+GGG    + M+    +I +
Sbjct: 124 SIYFLFPEFVIRPGVALSMPEGVAKSVLAFVLGGFSALLGIGGGTPMVITMVICQRTIQQ 183

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNG-LPPWSLGFVNIGAVLIILPISILITPLATK 253
           A AT+AGV  LI  P  +  ++        LP  ++G++NI A++ I   +I+  P+  K
Sbjct: 184 AVATAAGVGFLIGLPGAIGFLFMKHPETAILPVGTIGYINIPALVAISIGAIITAPMGAK 243

Query: 254 LSYMIGKKYLTIGFSMIMFTTS 275
           +++   +K L   F + +   S
Sbjct: 244 MAHNFSEKKLKRMFGIYLVIVS 265


>gi|260575167|ref|ZP_05843168.1| protein of unknown function DUF81 [Rhodobacter sp. SW2]
 gi|259022789|gb|EEW26084.1| protein of unknown function DUF81 [Rhodobacter sp. SW2]
          Length = 272

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 73/250 (29%), Positives = 124/250 (49%), Gaps = 3/250 (1%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
              +G ++GL GVGGG+V+VP     F+ +G      M V + TSL  I  TSV S + H
Sbjct: 18  GAFAGVIAGLLGVGGGIVLVPAFFFTFEQLGYGSPQLMQVCLATSLATIIVTSVRSVLAH 77

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLY 148
            R G ++  IL+ W   +    V+   + S +  + L   F +  L+ G+ M   R    
Sbjct: 78  NRKGAVDWAILRAWGPWIAAGAVLGMALASQLRSTTLQIIFGVLALIAGLYMAFGRADWR 137

Query: 149 CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
              + P    +   G   GF S  +G+GGG F   LM  Y   I++A AT+AG   +IA 
Sbjct: 138 LGPQMPGGVTRTGLGGALGFFSVLMGIGGGTFGVPLMSLYSLPIHRAVATAAGFGLIIAL 197

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
           P++L  +     +   PP+++G VN+ A  +I+ ++++ TPL  +L++ +  + L   F+
Sbjct: 198 PSVLGFLL--LDIAVKPPFTVGAVNLPAFAVIIAMTLITTPLGVRLAHAMDPRPLKRAFA 255

Query: 269 MIMFTTSFVF 278
           + +   +   
Sbjct: 256 VFILVVALNM 265



 Score = 43.9 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 18/125 (14%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G  S L G+GGG   VP++S          S+ +H A+ T+ G     ++ S +  
Sbjct: 152 GGALGFFSVLMGIGGGTFGVPLMSLY--------SLPIHRAVATAAGFGLIIALPSVLGF 203

Query: 90  RRH----------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                        G +N+      I +  ITT +   +   +D   L +AFA+F L++ +
Sbjct: 204 LLLDIAVKPPFTVGAVNLPAFAVIIAMTLITTPLGVRLAHAMDPRPLKRAFAVFILVVAL 263

Query: 140 LMLKR 144
            ML++
Sbjct: 264 NMLRK 268


>gi|157374273|ref|YP_001472873.1| hypothetical protein Ssed_1134 [Shewanella sediminis HAW-EB3]
 gi|157316647|gb|ABV35745.1| protein of unknown function DUF81 [Shewanella sediminis HAW-EB3]
          Length = 267

 Score =  189 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 1/264 (0%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D ++ +    +      G ++GL G+GGG++ VPVL       G +  +  HVA+ TSL 
Sbjct: 2   DNLIWFFISCLGLGAFVGFMAGLLGIGGGIIAVPVLLYLLPSAGFELGVLPHVAIATSLS 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I  TS  S   H R G I   + K  +  L I    +  +   +    L + FAIF +L
Sbjct: 62  AIILTSCSSAFAHHRRGNIPWPLFKPMLPGLIIGASCSGFISHAISADTLQQTFAIFVIL 121

Query: 137 MGILMLKRDRLY-CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           M + M+   R+   E+  P     +I        +  +G+GGGI     + + G  +  A
Sbjct: 122 MAVQMVFPLRVAGEEKPMPAASTLFIASAAIASFAALMGIGGGILLVPFLSWCGLQMRNA 181

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
              SA     IA    +  + +GW +  LPP +LG+V + A+L I+  S+ + P+  + +
Sbjct: 182 IGFSAASGVFIALFGSVGYVLAGWNVTDLPPGTLGYVYLPALLGIIITSVTMAPVGVRAA 241

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
                  L   F++++  T    A
Sbjct: 242 THWPTPILKKIFAVLLIFTGIKLA 265



 Score = 36.6 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 20/117 (17%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR------- 91
           L G+GGG+++VP LS           + M  A+G S       ++   + +         
Sbjct: 158 LMGIGGGILLVPFLSWC--------GLQMRNAIGFSAASGVFIALFGSVGYVLAGWNVTD 209

Query: 92  -----HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                 G + +  L   I        V     +H     L K FA+  +  GI +  
Sbjct: 210 LPPGTLGYVYLPALLGIIITSVTMAPVGVRAATHWPTPILKKIFAVLLIFTGIKLAL 266


>gi|319781760|ref|YP_004141236.1| hypothetical protein Mesci_2033 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167648|gb|ADV11186.1| protein of unknown function DUF81 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 278

 Score =  189 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 67/230 (29%), Positives = 115/230 (50%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL     L     ++  H+A+ TSL VI PTS+ S   H R G ++  +L  W   + +
Sbjct: 46  PVLFWVLSLFHFSPAVISHLAVATSLAVIIPTSISSMRSHNRRGNVDRPLLTLWGPAVFV 105

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP-DNYVKYIWGMVTGF 168
           + ++  +    +  + L   F +  LL+ + M     L      P   ++      V GF
Sbjct: 106 SALIGGITSKFIPGAGLRLVFGVVGLLVALNMALPKHLVISDHLPQSGWINRAIASVIGF 165

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+GGG  +   +  +   +++A  TS+ +  LIA PA+   I+SG  + G PP S
Sbjct: 166 VSSLMGIGGGTLSVPTLSSFSFPVHRAVGTSSALGLLIALPAVAGFIWSGLAIAGRPPLS 225

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           LG+V++ AV II P+S L  PL  +L++ +  +YL + F+  +  T+   
Sbjct: 226 LGYVSLPAVAIIAPVSFLFAPLGARLAHALNPRYLKLAFAFFLAITAGRM 275



 Score = 42.4 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 20/128 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
             + + G +S L G+GGG + VP LS          S  +H A+GTS  +    ++ +  
Sbjct: 158 AIASVIGFVSSLMGIGGGTLSVPTLSSF--------SFPVHRAVGTSSALGLLIALPAVA 209

Query: 88  EHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                            G +++  +     V  +   + + +   ++  +L  AFA F  
Sbjct: 210 GFIWSGLAIAGRPPLSLGYVSLPAVAIIAPVSFLFAPLGARLAHALNPRYLKLAFAFFLA 269

Query: 136 LMGILMLK 143
           +    ML 
Sbjct: 270 ITAGRMLL 277


>gi|113971198|ref|YP_734991.1| hypothetical protein Shewmr4_2863 [Shewanella sp. MR-4]
 gi|113885882|gb|ABI39934.1| protein of unknown function DUF81 [Shewanella sp. MR-4]
          Length = 266

 Score =  189 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 62/252 (24%), Positives = 122/252 (48%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D ++    + +      G ++GL G+GGGL++VP L      +GI  +   H+A+ TSL 
Sbjct: 2   DSLLSVFFICLALGAFVGFMAGLLGIGGGLIVVPALLYILPSVGITSAQLPHIAIATSLA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I  TS+ S   H + G +   + +     + +  +++  +   +  + L + FA+F +L
Sbjct: 62  AIILTSISSARAHHKRGNVPWGLFRTMFPGIILGALMSGFIAEQIPAATLRQGFAVFVML 121

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           M I M    +    R+ P++ + ++  M+   ++G +G+GGG+     + ++G  +  A 
Sbjct: 122 MAIQMAYPFKTESNRELPNSAILFVVAMIVAVIAGLMGIGGGVLLVPFLTYFGLQMRLAV 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             SA    LI+    L  I +G+    LP  +LG++ + A+  ++  SIL+ P+  K + 
Sbjct: 182 GFSAATGLLISLSGSLGYIIAGFNAPDLPEGTLGYIYLPALFGLIITSILMAPVGVKAAS 241

Query: 257 MIGKKYLTIGFS 268
                 L   F+
Sbjct: 242 TWPTSVLKKIFA 253


>gi|91794131|ref|YP_563782.1| hypothetical protein Sden_2780 [Shewanella denitrificans OS217]
 gi|91716133|gb|ABE56059.1| protein of unknown function DUF81 [Shewanella denitrificans OS217]
          Length = 264

 Score =  189 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 65/259 (25%), Positives = 123/259 (47%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +     + +    + G L+GL G+GGGL++VP L      +G++     H+A+ TSL  I
Sbjct: 1   MFTVFLICLALGAVVGFLAGLLGIGGGLIIVPALLYLLPWVGVESQQLTHMAIATSLASI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS+ +   H +   I   +    +  + +  ++   +   +  + L + FAIF +LM 
Sbjct: 61  ILTSMSAASAHHKRANIPWPLFNTIMPGIILGALMAGFISEQISSAALQQVFAIFVILMA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           + M    +    R  P   V +   +V   L+G +G+GGG+    L+ ++G ++ +A   
Sbjct: 121 LQMAFPIKPQAGRGLPSGQVLFGLSVVIALLAGMMGIGGGVLMVPLLSYFGLAMRQAVGL 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+    LIA    L  + +G+    LP +SLG++ + A+L I+  S+L  PL  K + + 
Sbjct: 181 SSATGFLIALSGSLGYVVAGFDATHLPDYSLGYIYLPALLGIVITSMLAAPLGVKAASLW 240

Query: 259 GKKYLTIGFSMIMFTTSFV 277
               L   F++++      
Sbjct: 241 PTPVLKKLFAILLVLVGIK 259



 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 4/122 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++   S +   L+G+ G+GGG++MVP+LS       Q +G+  +    +A+  SLG +  
Sbjct: 140 VLFGLSVVIALLAGMMGIGGGVLMVPLLSYFGLAMRQAVGLSSATGFLIALSGSLGYVVA 199

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
               + +     G I +  L   +    +   +     S      L K FAI  +L+GI 
Sbjct: 200 GFDATHLPDYSLGYIYLPALLGIVITSMLAAPLGVKAASLWPTPVLKKLFAILLVLVGIK 259

Query: 141 ML 142
           ++
Sbjct: 260 LI 261


>gi|254460986|ref|ZP_05074402.1| membrane protein [Rhodobacterales bacterium HTCC2083]
 gi|206677575|gb|EDZ42062.1| membrane protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 274

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 108/230 (46%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P     F  +G D    M + +GTSL  I  TSV S + H + G +   IL+ W   + I
Sbjct: 38  PAFFYVFGALGYDGPQLMQMCLGTSLATIIVTSVRSVLSHNKKGAVGWDILRTWAPGIVI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
              +  ++ + +    L   F +   ++G+ M   R         P    + I   + GF
Sbjct: 98  GAGLGVMVAASMRSGALQMIFGVLAFIVGLYMTFGRSSWRVSEDMPTGVKRMISSPILGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+GGG F    M  +G +I++A AT+AG   LIA PA++  ++        PP++
Sbjct: 158 MSVLMGIGGGSFGVPFMSLHGVAIHRAVATAAGFGVLIAVPAVIGFLFVPIDPAMRPPFT 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +G VN+ A ++++ +++L  P   KL++ +    L   F + +   +   
Sbjct: 218 VGAVNLIAFVVVIAMTLLTAPWGVKLAHAMDAGPLKKAFGVFLTFVALNM 267



 Score = 38.5 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +++S + G +S L G+GGG   VP +S           + +H A+ T+ G     +V + 
Sbjct: 149 MISSPILGFMSVLMGIGGGSFGVPFMSL--------HGVAIHRAVATAAGFGVLIAVPAV 200

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G +N+      I +  +T      +   +D   L KAF +F 
Sbjct: 201 IGFLFVPIDPAMRPPFTVGAVNLIAFVVVIAMTLLTAPWGVKLAHAMDAGPLKKAFGVFL 260

Query: 135 LLMGILMLKR 144
             + + ML++
Sbjct: 261 TFVALNMLRK 270


>gi|190151252|ref|YP_001969777.1| hypothetical protein APP7_1983 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303249676|ref|ZP_07335881.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307251168|ref|ZP_07533090.1| hypothetical protein appser4_19280 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307253586|ref|ZP_07535454.1| hypothetical protein appser6_20770 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307258002|ref|ZP_07539755.1| hypothetical protein appser10_19830 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|189916383|gb|ACE62635.1| hypothetical protein APP7_1983 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|302651488|gb|EFL81639.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306856834|gb|EFM88968.1| hypothetical protein appser4_19280 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858966|gb|EFM91011.1| hypothetical protein appser6_20770 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306863549|gb|EFM95479.1| hypothetical protein appser10_19830 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 263

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 120/260 (46%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +++     +V     G L+GLFG+GGGL++VP L     L G+     M  A+GTS   I
Sbjct: 1   MIEVFLSCLVVGSAVGFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S   H + G +++ + K +I  L ++  +  L +S++D   ++K FA+  L + 
Sbjct: 61  VVTAFSSAQRHHKLGNVDVLVSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             ML   +   E K        + G V G LS   G+ GG F    +   G  + +A  T
Sbjct: 121 ARMLFSLKKTPEIKPLTTQSTIVAGGVIGALSSMAGIAGGAFIVPFLNSRGLEMKRAIGT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+   A +     +  I SGW +  +P +SLG+V + A+  I   S   + L    + ++
Sbjct: 181 SSFCGAFLGLSGTISFIASGWNVETMPDYSLGYVYLPALFGITLTSYFTSKLGANAANVL 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++++   +   
Sbjct: 241 PVATLKKAFAVMLVAIAINM 260



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IVA  + G LS + G+ GG  +VP L+           + M  A+GTS    A   +   
Sbjct: 142 IVAGGVIGALSSMAGIAGGAFIVPFLN--------SRGLEMKRAIGTSSFCGAFLGLSGT 193

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G + +  L         T+ + +   + +  + L KAFA+  
Sbjct: 194 ISFIASGWNVETMPDYSLGYVYLPALFGITLTSYFTSKLGANAANVLPVATLKKAFAVML 253

Query: 135 LLMGILMLKR 144
           + + I M  +
Sbjct: 254 VAIAINMFVK 263


>gi|32034236|ref|ZP_00134447.1| COG0730: Predicted permeases [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126209356|ref|YP_001054581.1| hypothetical protein APL_1896 [Actinobacillus pleuropneumoniae L20]
 gi|126098148|gb|ABN74976.1| hypothetical protein APL_1896 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 263

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 121/260 (46%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +++     +V     G L+GLFG+GGGL++VP L     L G+     M  A+GTS   I
Sbjct: 1   MIEVFLSCLVVGSAVGFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S   H + G +++ + K +I  L ++  +  L +S++D   ++K FA+  L + 
Sbjct: 61  VVTAFSSAQRHHKLGNVDVLVSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             ML   +   E K        + G V G LS   G+ GG F    +   G  + +A  T
Sbjct: 121 ARMLFSLKKTPEIKPLTTQFTIVAGGVIGALSSMAGIAGGAFIVPFLNSRGLEMKRAIGT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+   A +     +  I SGW +  +P +SLG+V + A+L I   S   + L    + ++
Sbjct: 181 SSFCGAFLGLSGTISFIASGWNVETMPDYSLGYVYLPALLGITLTSYFTSKLGANAANVL 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++++   +   
Sbjct: 241 PVATLKKAFAVMLVAIAINM 260



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IVA  + G LS + G+ GG  +VP L+           + M  A+GTS    A   +   
Sbjct: 142 IVAGGVIGALSSMAGIAGGAFIVPFLN--------SRGLEMKRAIGTSSFCGAFLGLSGT 193

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G + +  L         T+ + +   + +  + L KAFA+  
Sbjct: 194 ISFIASGWNVETMPDYSLGYVYLPALLGITLTSYFTSKLGANAANVLPVATLKKAFAVML 253

Query: 135 LLMGILMLKR 144
           + + I M  +
Sbjct: 254 VAIAINMFVK 263


>gi|114048436|ref|YP_738986.1| hypothetical protein Shewmr7_2945 [Shewanella sp. MR-7]
 gi|113889878|gb|ABI43929.1| protein of unknown function DUF81 [Shewanella sp. MR-7]
          Length = 266

 Score =  189 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 62/252 (24%), Positives = 123/252 (48%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D ++    + +      G ++GL G+GGGL++VP L      +GI  +   H+A+ TSL 
Sbjct: 2   DSLLSVFFICLALGAFVGFMAGLLGIGGGLIVVPALLYILPSVGITSAQLPHIAIATSLA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I  TS+ S   H + G +   + +  +  + +  +++  +   +  + L + FA+F +L
Sbjct: 62  AIILTSISSARAHHKRGNVPWGLFRTMLPGIILGALMSGFIAEQIPAAALRQGFAVFVML 121

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           M I M    +    R+ P++ + ++  M+   ++G +G+GGG+     + ++G  +  A 
Sbjct: 122 MAIQMAYPFKTESNRELPNSAILFVVAMIVAVIAGLMGIGGGVLLVPFLTYFGLQMRLAV 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             SA    LI+    L  I +G+    LP  +LG++ + A+  ++  SIL+ P+  K + 
Sbjct: 182 GFSAATGLLISLSGSLGYIIAGFNAPDLPEGTLGYIYLPALFGLIITSILMAPVGVKAAS 241

Query: 257 MIGKKYLTIGFS 268
                 L   F+
Sbjct: 242 TWPTSVLKKIFA 253



 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 4/125 (3%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIA 79
            ++ V + +   ++GL G+GGG+++VP L+         +G   +  + +++  SLG I 
Sbjct: 142 AILFVVAMIVAVIAGLMGIGGGVLLVPFLTYFGLQMRLAVGFSAATGLLISLSGSLGYII 201

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                  +     G I +  L   I    +   V     S    S L K FA+  L +G+
Sbjct: 202 AGFNAPDLPEGTLGYIYLPALFGLIITSILMAPVGVKAASTWPTSVLKKIFALLLLCVGL 261

Query: 140 LMLKR 144
            ++  
Sbjct: 262 KLILS 266


>gi|152994490|ref|YP_001339325.1| hypothetical protein Mmwyl1_0453 [Marinomonas sp. MWYL1]
 gi|150835414|gb|ABR69390.1| protein of unknown function DUF81 [Marinomonas sp. MWYL1]
          Length = 272

 Score =  189 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 4/231 (1%)

Query: 50  PVLSKAFQLMGIDDSICM--HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           PVL   +Q MG+     M    A  TSL  I PTS+ S   H+  G ++  +LK W F +
Sbjct: 38  PVLYFLYQGMGVSADSAMLV--ATATSLATIIPTSISSIRSHKAKGNVDFDLLKRWGFFI 95

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
               +V S +++ VD  +L+  F +   L  + ML   +    +  P N  + +     G
Sbjct: 96  FAGVMVGSFVVTRVDGQWLSLLFGVIATLSALNMLLGKKDSVFKSLPGNAGQSVMATCIG 155

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           F S  +G+GGG  T   + F     ++A  T+A V  +I+ PA L  +  G      P  
Sbjct: 156 FFSSMVGIGGGTLTVPTLTFCNYPAHRAVGTAAAVGLIISLPAALTMLIFGQSPVDAPYG 215

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++G VN+  V+ I+P+++L  P+   L++ +    L   F++++  T    
Sbjct: 216 TVGLVNLIGVICIIPLTVLFAPVGAGLAHRLDASKLKKVFAVVLIFTGIKM 266



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V +   G  S + G+GGG + VP L+          +   H A+GT+  V    S+ + +
Sbjct: 149 VMATCIGFFSSMVGIGGGTLTVPTLTFC--------NYPAHRAVGTAAAVGLIISLPAAL 200

Query: 88  E------------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                        +   G +N+  +   I +  +   V + +   +D S L K FA+  +
Sbjct: 201 TMLIFGQSPVDAPYGTVGLVNLIGVICIIPLTVLFAPVGAGLAHRLDASKLKKVFAVVLI 260

Query: 136 LMGILMLKR 144
             GI ML +
Sbjct: 261 FTGIKMLYQ 269


>gi|255291927|dbj|BAH90416.1| hypothetical protein [uncultured bacterium]
          Length = 272

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 120/256 (46%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +    +   ++G  +GL G+GGGL+++  L+  ++  G    I M +A+GTSL  I  T
Sbjct: 5   ILVYYALIGVVAGVAAGLLGIGGGLIIIAPLAALYRAQGFSGDILMQLAVGTSLTTIVFT 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H R G +   IL  +I  +     + +++   V    L      F  L G+ M
Sbjct: 65  SLSSARAHHRRGAVLWPILGRFIPGVVAGCALGAVIADRVSSRELEIVVGTFAGLAGLRM 124

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L +      R+ P   V     +  G +S  +G+GGG+ T   +++    +  A  TSA 
Sbjct: 125 LVKTNPPPHRRLPGTPVLVAVAVAIGTVSTLVGIGGGLMTVPFLVWSSVPVRHAIGTSAA 184

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           +   IA    +     GWG  GLPP + G+V     L I   ++L  PL   L++++  +
Sbjct: 185 LGFPIAVFGAVGMAAVGWGHPGLPPLATGYVYWPGALSIAAATVLFAPLGAHLAHVLPVR 244

Query: 262 YLTIGFSMIMFTTSFV 277
            +T+ F++++F  S  
Sbjct: 245 VVTVIFALVLFVISAR 260



 Score = 43.1 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 47/137 (34%), Gaps = 20/137 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++  +   GT+S L G+GGGL+ VP L           S+ +  A+GTS  +  P +V 
Sbjct: 141 VLVAVAVAIGTVSTLVGIGGGLMTVPFLVW--------SSVPVRHAIGTSAALGFPIAVF 192

Query: 85  SF-------MEH-----RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                      H        G +             +   + + +   +    +   FA+
Sbjct: 193 GAVGMAAVGWGHPGLPPLATGYVYWPGALSIAAATVLFAPLGAHLAHVLPVRVVTVIFAL 252

Query: 133 FCLLMGILMLKRDRLYC 149
              ++   ++       
Sbjct: 253 VLFVISARLIGGGGWEA 269


>gi|163752420|ref|ZP_02159612.1| hypothetical protein KT99_03459 [Shewanella benthica KT99]
 gi|161327679|gb|EDP98871.1| hypothetical protein KT99_03459 [Shewanella benthica KT99]
          Length = 267

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 1/247 (0%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G ++GL G+GGGLV VPVL      +G D ++  HVA+ TSL  I  TS+ S   H + G
Sbjct: 19  GFMAGLLGIGGGLVAVPVLLYLLPSVGFDAAVLPHVAIATSLAAIILTSMSSARAHHKQG 78

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC-ERK 152
            I   +LK  +  L   ++    + S +    L  +FA+F + M   M+   R+   +++
Sbjct: 79  NIPWPLLKSVLPGLIFGSLSAGFISSFLSAKLLQTSFAVFVICMAAQMIFPYRVSLVDKQ 138

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            P   + +    V   ++  +G+GGG+     + + G  +  A   S+     IA    +
Sbjct: 139 MPSMPILFAVSAVIAIIAALMGIGGGVLLIPFLSWCGLQMRNAIGFSSASGVFIALFGSV 198

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             ++SGW ++ LP W+LG+V + A+L I+ IS+LI PL  K + +   K L   F++++ 
Sbjct: 199 SYVFSGWNVSCLPEWTLGYVYLPALLAIVMISVLIAPLGVKAASIWPTKILRRIFALLLI 258

Query: 273 TTSFVFA 279
                 A
Sbjct: 259 LVGVKLA 265


>gi|197334961|ref|YP_002155213.1| thymidylate synthase [Vibrio fischeri MJ11]
 gi|197316451|gb|ACH65898.1| thymidylate synthase [Vibrio fischeri MJ11]
          Length = 265

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 76/258 (29%), Positives = 119/258 (46%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
               L ++   L G ++GL G+GGGL++VP L       GID SI M +A+GTSL  I  
Sbjct: 5   SLFVLYLLLGSLVGVMAGLLGIGGGLLVVPALLWLLPQAGIDSSIVMQMALGTSLATIIL 64

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS  S + H R G + + +++     +     + S +   +   +L K F +  LL+ + 
Sbjct: 65  TSTSSALNHLRLGNVEVALIRSLAPGVIAGGFLGSYVAELIPSQYLPKVFGVIVLLLALQ 124

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           ML   +    R  P        G V G +S   G+GGG  T   + F+G  + KA  +S+
Sbjct: 125 MLLALKFTATRTMPSPLKIAASGGVIGVVSSLAGIGGGSLTVPYLSFHGVEMRKAIGSSS 184

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
               LIA   ++  I  G  +  LP  SLG+V + A+  I   SIL T +  KL+  +  
Sbjct: 185 LCGTLIALAGMIGFILHGVQVTNLPSMSLGYVYLPALCGIGVTSILTTRIGAKLTSHLPT 244

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F++ +       
Sbjct: 245 STLKKIFAIFLVFIGSKM 262



 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I  +  + G +S L G+GGG + VP LS           + M  A+G+S       ++  
Sbjct: 143 IAASGGVIGVVSSLAGIGGGSLTVPYLSF--------HGVEMRKAIGSSSLCGTLIALAG 194

Query: 86  FMEHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +    HG             + +  L        +TT + + + SH+  S L K FAIF
Sbjct: 195 MIGFILHGVQVTNLPSMSLGYVYLPALCGIGVTSILTTRIGAKLTSHLPTSTLKKIFAIF 254

Query: 134 CLLMGILMLKR 144
            + +G  M   
Sbjct: 255 LVFIGSKMFLG 265


>gi|296536289|ref|ZP_06898403.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
 gi|296263378|gb|EFH09889.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
          Length = 276

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 86/254 (33%), Positives = 133/254 (52%), Gaps = 1/254 (0%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + V   LSGTL+GL GVGGG+V+VPVL   F L+GI +++ M +A+GTSL  I PTS++S
Sbjct: 17  MAVTGLLSGTLAGLLGVGGGIVIVPVLFNIFPLLGIPETVQMKLAVGTSLATIIPTSIVS 76

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKR 144
             +H   G I+  +LK     + I   + ++    +    L+  FA   LL+ + M    
Sbjct: 77  ARKHYAKGAIDTGLLKAIWPSMIIGVALGTVAAIWLHGDALSAVFATIALLVAVNMGFTG 136

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
                    P     +  G   G +S  +G+GGG     ++  +G  I  A ATS+    
Sbjct: 137 VDFKLRDTTPRGAGLWGIGGFIGTVSAMMGIGGGTVGVPILSMFGTPIRSAVATSSVFGL 196

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           +I+ PA +  +Y GWG + LPP+SLG+VN+    +I+P SIL TP    L++ I    L 
Sbjct: 197 IISIPATIGFLYGGWGAHDLPPYSLGYVNLIGFALIVPSSILATPWGVHLAHTIPPLALK 256

Query: 265 IGFSMIMFTTSFVF 278
             F++ +  T+   
Sbjct: 257 RAFAVFLAITAVRM 270



 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 44/127 (34%), Gaps = 20/127 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               GT+S + G+GGG V VP+LS             +  A+ TS       S+ + +  
Sbjct: 155 GGFIGTVSAMMGIGGGTVGVPILSMF--------GTPIRSAVATSSVFGLIISIPATIGF 206

Query: 90  ------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G +N+      +    + T     +   +    L +AFA+F  + 
Sbjct: 207 LYGGWGAHDLPPYSLGYVNLIGFALIVPSSILATPWGVHLAHTIPPLALKRAFAVFLAIT 266

Query: 138 GILMLKR 144
            + M   
Sbjct: 267 AVRMFYG 273


>gi|303253816|ref|ZP_07339950.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|302647339|gb|EFL77561.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
          Length = 263

 Score =  188 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 120/260 (46%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +++     +V     G L+GLFG+GGGL++VP L     L  +     M  A+GTS   I
Sbjct: 1   MIEVFLSCLVVGSAVGFLAGLFGIGGGLIIVPSLVYLLPLASVTPENLMAAALGTSFSTI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S   H + G +++ + K +I  L ++  +  L +S++D   ++K FA+  L + 
Sbjct: 61  VVTAFSSAQRHHKLGNVDVLVSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             ML   +   E K        + G V G LS   G+ GG F    +   G  + +A  T
Sbjct: 121 ARMLFSLKKTPEIKPLTTQSTIVAGGVIGALSSMAGIAGGAFIVPFLNSRGLEMKRAIGT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+   A +     +  I SGW +  +P +SLG+V + A+L I   S   + L    + ++
Sbjct: 181 SSFCGAFLGLSGTISFIASGWNVETMPDYSLGYVYLPALLGITLTSYFTSKLGANAANVL 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++++   +   
Sbjct: 241 PVATLKKAFAVMLVAIAINM 260



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IVA  + G LS + G+ GG  +VP L+           + M  A+GTS    A   +   
Sbjct: 142 IVAGGVIGALSSMAGIAGGAFIVPFLN--------SRGLEMKRAIGTSSFCGAFLGLSGT 193

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G + +  L         T+ + +   + +  + L KAFA+  
Sbjct: 194 ISFIASGWNVETMPDYSLGYVYLPALLGITLTSYFTSKLGANAANVLPVATLKKAFAVML 253

Query: 135 LLMGILMLKR 144
           + + I M  +
Sbjct: 254 VAIAINMFVK 263


>gi|127511973|ref|YP_001093170.1| hypothetical protein Shew_1040 [Shewanella loihica PV-4]
 gi|126637268|gb|ABO22911.1| protein of unknown function DUF81 [Shewanella loihica PV-4]
          Length = 264

 Score =  188 bits (479), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 1/262 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +   +   I      G ++GL G+GGG++ VPVL     + G+      HVA+ TSL  I
Sbjct: 1   MFTIVVSCIALGAFIGFMAGLLGIGGGVIAVPVLLFLLPMAGVVPEHLTHVAIATSLAAI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T   S   H   G I   +L   +  L +  +    + S      L + FA F +LM 
Sbjct: 61  ILTGASSARAHHARGNIPWHLLTIMLPGLIVGALSAGFISSLFSAQLLKQVFAGFLVLMA 120

Query: 139 ILMLKRDRLYC-ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           + M+   +    ER  P +   ++  M    ++  +G+GGGI     + + G  +  A  
Sbjct: 121 LQMVFPFKAAEGERSLPASPYLFVTAMFVAIIAALMGIGGGILFIPFLTWCGVQMRHAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            S+    +IA    L  +++GW   GLP ++LG++ + A+  I+  S+L  PL  K + +
Sbjct: 181 FSSVTGLMIALFGSLSYVFAGWATQGLPEYTLGYIYLPALFGIVCTSMLTAPLGAKAASV 240

Query: 258 IGKKYLTIGFSMIMFTTSFVFA 279
                L   F++++F T    A
Sbjct: 241 WPTARLKKIFAVMLFFTGIKLA 262



 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 4/124 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAP 80
            + V +     ++ L G+GGG++ +P L+         +G      + +A+  SL  +  
Sbjct: 141 YLFVTAMFVAIIAALMGIGGGILFIPFLTWCGVQMRHAIGFSSVTGLMIALFGSLSYVFA 200

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                 +     G I +  L   +    +T  + +   S    + L K FA+     GI 
Sbjct: 201 GWATQGLPEYTLGYIYLPALFGIVCTSMLTAPLGAKAASVWPTARLKKIFAVMLFFTGIK 260

Query: 141 MLKR 144
           +   
Sbjct: 261 LALS 264


>gi|89068927|ref|ZP_01156309.1| membrane protein [Oceanicola granulosus HTCC2516]
 gi|89045508|gb|EAR51572.1| membrane protein [Oceanicola granulosus HTCC2516]
          Length = 274

 Score =  188 bits (478), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AF  +G D    M + + TSL  I  TSV S + H R G +   ILK W   + +
Sbjct: 38  PAFFYAFATLGYDSPELMRMCLATSLATIIVTSVRSLLAHNRRGAVEWDILKGWALGIAL 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK-RDRLYCERKFPDNYVKYIWGMVTGF 168
             V    + + +    L   F     ++G+ ML  R       + P+  V+++   + GF
Sbjct: 98  GAVAGVAVAASLRSQTLQAIFGGLASVVGLYMLFGRPHWRVAERMPEGPVRWVLSPLIGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   +M  +   I++A AT+AG   +IA P++   +      +  PP +
Sbjct: 158 LSVLMGIGGGSFGVPVMSLHNVPIHRAVATAAGFGVIIAVPSVAGFLLVPMSPDVRPPLT 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           LG VN+ A  +++ ++++  P    L++ +    L   F   +   +   
Sbjct: 218 LGAVNLVAFGLVIAMTLITAPWGAALAHRMDPGPLKRVFGAFLLLVALNM 267



 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 20/125 (16%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L G LS L G+GGG   VPV+S          ++ +H A+ T+ G     +V S      
Sbjct: 154 LIGFLSVLMGIGGGSFGVPVMSL--------HNVPIHRAVATAAGFGVIIAVPSVAGFLL 205

Query: 92  ------------HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                        G +N+      I +  IT    + +   +D   L + F  F LL+ +
Sbjct: 206 VPMSPDVRPPLTLGAVNLVAFGLVIAMTLITAPWGAALAHRMDPGPLKRVFGAFLLLVAL 265

Query: 140 LMLKR 144
            M++R
Sbjct: 266 NMVRR 270


>gi|307264603|ref|ZP_07546185.1| hypothetical protein appser13_19900 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|306870066|gb|EFN01828.1| hypothetical protein appser13_19900 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 258

 Score =  187 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 69/253 (27%), Positives = 117/253 (46%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +V     G L+GLFG+GGGL++VP L     L G+     M  A+GTS   I  T+  S
Sbjct: 3   CLVVGSAVGFLAGLFGIGGGLIIVPSLVYLLPLAGVTPENLMAAALGTSFSTIVVTAFSS 62

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H + G +++ + K +I  L ++  +  L +S++D   ++K FA+  L +   ML   
Sbjct: 63  AQRHHKLGNVDVLVSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLAARMLFSL 122

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
           +   E K        + G V G LS   G+ GG F    +   G  + +A  TS+   A 
Sbjct: 123 KKTPEIKPLTTQSTIVAGGVIGALSSMAGIAGGAFIVPFLNSRGLEMKRAIGTSSFCGAF 182

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           +     +  I SGW +  +P +SLG+V + A+  I   S   + L    + ++    L  
Sbjct: 183 LGLSGTISFIASGWNVETMPDYSLGYVYLPALFGITLTSYFTSKLGANAANVLPVATLKK 242

Query: 266 GFSMIMFTTSFVF 278
            F++++   +   
Sbjct: 243 AFAVMLVAIAINM 255



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IVA  + G LS + G+ GG  +VP L+           + M  A+GTS    A   +   
Sbjct: 137 IVAGGVIGALSSMAGIAGGAFIVPFLN--------SRGLEMKRAIGTSSFCGAFLGLSGT 188

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G + +  L         T+ + +   + +  + L KAFA+  
Sbjct: 189 ISFIASGWNVETMPDYSLGYVYLPALFGITLTSYFTSKLGANAANVLPVATLKKAFAVML 248

Query: 135 LLMGILMLKR 144
           + + I M  +
Sbjct: 249 VAIAINMFVK 258


>gi|262274911|ref|ZP_06052722.1| hypothetical protein VHA_001894 [Grimontia hollisae CIP 101886]
 gi|262221474|gb|EEY72788.1| hypothetical protein VHA_001894 [Grimontia hollisae CIP 101886]
          Length = 268

 Score =  187 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 49/230 (21%), Positives = 99/230 (43%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P LS      G+ D + M +A+ TSL  I  TS  S   H + G +   +++  +  + +
Sbjct: 36  PALSVLLPWAGVSDDLVMPMALATSLASIVITSASSAFTHYQLGNVQPSVIRSLLPGILV 95

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
             ++ S +   +   +L K F +  L++ + M    R+   R  P        G + G +
Sbjct: 96  GGMLGSAIADKMPTQYLPKVFGVIVLILALQMALSLRVRPARSLPSAIGSMTSGTMIGMI 155

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG-LPPWS 228
           +   G+GGG  T   + ++G  + KA   ++     +A   +   I+ G      LP +S
Sbjct: 156 ASLAGIGGGSLTVPYLNYHGVEMRKAIGCASLCGVFLALSGVAGFIFFGLNQPETLPVYS 215

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +G+V + A++ I+  S++ T     L+  +    +   F++ +       
Sbjct: 216 VGYVYLPALMGIVITSVMTTRYGASLATRLPTPIIKRVFAVFLLLVGASM 265



 Score = 43.5 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 21/129 (16%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           +  + G ++ L G+GGG + VP L+           + M  A+G +       ++     
Sbjct: 148 SGTMIGMIASLAGIGGGSLTVPYLNY--------HGVEMRKAIGCASLCGVFLALSGVAG 199

Query: 89  H-------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                            G + +  L   +    +TT   + + + +    + + FA+F L
Sbjct: 200 FIFFGLNQPETLPVYSVGYVYLPALMGIVITSVMTTRYGASLATRLPTPIIKRVFAVFLL 259

Query: 136 LMGILMLKR 144
           L+G  M   
Sbjct: 260 LVGASMFFS 268


>gi|119469832|ref|ZP_01612670.1| hypothetical protein ATW7_02047 [Alteromonadales bacterium TW-7]
 gi|119446815|gb|EAW28087.1| hypothetical protein ATW7_02047 [Alteromonadales bacterium TW-7]
          Length = 274

 Score =  187 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 78/258 (30%), Positives = 125/258 (48%), Gaps = 1/258 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  +I     +G L+GLFGVGGG+V+VPVL    Q  G+     M +A  TSL  I PT
Sbjct: 10  IIVALIATGIFAGILAGLFGVGGGIVIVPVLYFLLQGFGVSPESAMMIATATSLATIVPT 69

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H   G I++ ++K W   + +  VV S +   +  + L   FA   +L+ + M
Sbjct: 70  SISSIRSHHAKGNIDLALIKYWAPFILVMAVVGSYLAHSIRGNALVLMFACIAILVSLNM 129

Query: 142 LKR-DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           L R        K P  + + I   + G LS  +G+GGG     ++  +    + A  T+A
Sbjct: 130 LFRAGAPALVSKLPGKFGQGIMASIVGGLSVMIGIGGGTIGVPMLNAFNVRAHVAVGTAA 189

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
               LIA P ++  +  G      P  + G VN+ A L+I+P++IL  P+  K+   + +
Sbjct: 190 VFGLLIALPGVITLLSIGTTPTDAPLGTWGLVNLPAFLLIIPLTILFAPIGVKIGSKLDQ 249

Query: 261 KYLTIGFSMIMFTTSFVF 278
           K L   F++++  T    
Sbjct: 250 KQLKRAFAVVLMITGIRM 267



 Score = 39.7 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 12/131 (9%)

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF----YGASIYKATATSAGVSALIA 207
           ++P        G+  G L+G  GVGGGI    ++ F    +G S   A   +   S    
Sbjct: 7   QWPIIVALIATGIFAGILAGLFGVGGGIVIVPVLYFLLQGFGVSPESAMMIATATSLATI 66

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
            P  +  I            + G +++  +    P  +++  + + L++ I    L + F
Sbjct: 67  VPTSISSI--------RSHHAKGNIDLALIKYWAPFILVMAVVGSYLAHSIRGNALVLMF 118

Query: 268 SMIMFTTSFVF 278
           + I    S   
Sbjct: 119 ACIAILVSLNM 129


>gi|119774002|ref|YP_926742.1| hypothetical protein Sama_0865 [Shewanella amazonensis SB2B]
 gi|119766502|gb|ABL99072.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
          Length = 255

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 71/251 (28%), Positives = 121/251 (48%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +      G ++GL G+GGGL++VP L      +G       HVA+ TSL  I  TS+ S 
Sbjct: 1   MALGAFVGFMAGLLGIGGGLMIVPALLYLLPGVGFSADYLPHVAIATSLSAIILTSISSA 60

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             H   G I+ ++LK     + +  +V+  +   +    L +AFAIF +LM + M     
Sbjct: 61  RAHHGRGNIDFQLLKILAPAVLLGALVSGFVAEQIPAEQLRQAFAIFVILMAVQMAFPFN 120

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
               +  P+  + +I       L+G +G+GGG+    LM+++G ++  A   SA    LI
Sbjct: 121 AAAAKPMPNGGLIFIAVFFVALLAGLMGIGGGVLLVPLMMYFGVAMRTAVGVSAATGLLI 180

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           A    +  + +GW   G+P ++LG+V + A+L I+  S+L  PL  K +       L   
Sbjct: 181 AVSGSVSYVLAGWNTQGMPDFTLGYVYLPALLGIVSTSMLTAPLGAKAASTWPTAVLKKI 240

Query: 267 FSMIMFTTSFV 277
           F++++      
Sbjct: 241 FAVLLTLIGLR 251



 Score = 43.9 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 20/130 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI +A F    L+GL G+GGG+++VP++            + M  A+G S       +V 
Sbjct: 132 LIFIAVFFVALLAGLMGIGGGVLLVPLMMYF--------GVAMRTAVGVSAATGLLIAVS 183

Query: 85  SFMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
             + +               G + +  L   +    +T  + +   S    + L K FA+
Sbjct: 184 GSVSYVLAGWNTQGMPDFTLGYVYLPALLGIVSTSMLTAPLGAKAASTWPTAVLKKIFAV 243

Query: 133 FCLLMGILML 142
              L+G+ ++
Sbjct: 244 LLTLIGLRLV 253


>gi|114765459|ref|ZP_01444569.1| membrane protein [Pelagibaca bermudensis HTCC2601]
 gi|114542169|gb|EAU45200.1| membrane protein [Roseovarius sp. HTCC2601]
          Length = 273

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P     F+ +G      M + + TSL  I  TS+ S + H + G +   IL+ W   + I
Sbjct: 38  PAFLFTFETIGYGSPQVMQICLATSLATIIVTSIRSVLSHNKKGAVEWGILRAWAPGIAI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             ++  L  + +   FL   F    + +G+     R         P   ++ +   V GF
Sbjct: 98  GALIGVLTAARLRSDFLQALFGCIAIFIGLYFAFGRRDWRLSGAMPGGGMRALLSPVVGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   +M      +++A AT+AG   LIA P++L  ++        PP +
Sbjct: 158 LSVLMGIGGGSFGVPMMTLCSVPMHRAVATAAGFGLLIALPSVLAFLFVPVPAEVRPPLT 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           LG VN+GA  I + ++++  PL  KL++ + +K L   F++ +   +   
Sbjct: 218 LGSVNLGAFFIAISMTLITAPLGAKLAHAVDEKTLRRSFAVFILVVAANM 267



 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 20/126 (15%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR- 90
           + G LS L G+GGG   VP+++          S+ MH A+ T+ G     ++ S +    
Sbjct: 154 VVGFLSVLMGIGGGSFGVPMMTLC--------SVPMHRAVATAAGFGLLIALPSVLAFLF 205

Query: 91  -----------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                        G++N+      I +  IT  + + +   VD+  L ++FA+F L++  
Sbjct: 206 VPVPAEVRPPLTLGSVNLGAFFIAISMTLITAPLGAKLAHAVDEKTLRRSFAVFILVVAA 265

Query: 140 LMLKRD 145
            ML++ 
Sbjct: 266 NMLRKS 271


>gi|59711065|ref|YP_203841.1| hypothetical protein VF_0458 [Vibrio fischeri ES114]
 gi|59479166|gb|AAW84953.1| hypothetical protein VF_0458 [Vibrio fischeri ES114]
          Length = 267

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 77/258 (29%), Positives = 121/258 (46%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
               L ++   + G ++GL G+GGGL++VP L       GID SI M +A+GTSL  I  
Sbjct: 7   SLFVLYLLLGSIVGVMAGLLGIGGGLLVVPALLWLLPQAGIDSSIVMQMALGTSLATIIL 66

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS  S + H R G + + +++     +     + S +   +   +L K F +  LL+ + 
Sbjct: 67  TSTSSALNHLRLGNVEVALIRSLAPGVIAGGFLGSYVAELIPSQYLPKVFGVIVLLLALQ 126

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           ML   +L   R  P        G V G +S   G+GGG  T   + F+G  + KA  +S+
Sbjct: 127 MLLALKLTATRTLPSPLKIAASGSVIGIVSSLAGIGGGSLTVPYLSFHGIEMRKAIGSSS 186

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
               LIA   ++  I  G  +  LPP SLG+V + A+  I   SIL T +  KL+  +  
Sbjct: 187 LCGTLIALAGMIGFILHGVQVTNLPPMSLGYVYLPALCGIGVTSILTTRIGAKLTSHLPT 246

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F++ +       
Sbjct: 247 STLKKIFAIFLVFIGSKM 264



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I  +  + G +S L G+GGG + VP LS           I M  A+G+S       ++  
Sbjct: 145 IAASGSVIGIVSSLAGIGGGSLTVPYLSF--------HGIEMRKAIGSSSLCGTLIALAG 196

Query: 86  FMEHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +    HG             + +  L        +TT + + + SH+  S L K FAIF
Sbjct: 197 MIGFILHGVQVTNLPPMSLGYVYLPALCGIGVTSILTTRIGAKLTSHLPTSTLKKIFAIF 256

Query: 134 CLLMGILMLKR 144
            + +G  M   
Sbjct: 257 LVFIGSKMFLG 267


>gi|84686987|ref|ZP_01014870.1| membrane protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84664961|gb|EAQ11442.1| membrane protein [Rhodobacterales bacterium HTCC2654]
          Length = 271

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 66/230 (28%), Positives = 112/230 (48%), Gaps = 3/230 (1%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AF  +G D    M V + TSL  I  TS+ S   H + G +   IL+ W   + I
Sbjct: 37  PAFYYAFAGLGYDGPELMQVCLATSLSTIIVTSIRSVSSHNKKGAVEWPILRAWAPGIMI 96

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-KRDRLYCERKFPDNYVKYIWGMVTGF 168
             V+  L+ S +    L   F    +L+   ML  +       + P    + I   + GF
Sbjct: 97  GAVIGVLVASGLRTPTLQVIFGTIAILVAFYMLFFKSEWQIADRMPGLVGRSILSPLVGF 156

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   +M  +G +I++A AT+AG   +IA P+++  ++    + G PP++
Sbjct: 157 LSVLMGIGGGSFGVPIMSLHGVAIHRAVATAAGFGLIIAVPSVIAFLFV--DVAGAPPYT 214

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +G VN+ A L+++ ++ L  PL  KL++ +  K L   F + +   +   
Sbjct: 215 IGAVNLPAFLVVIAMTTLTAPLGVKLAHAMDPKPLKRVFGVFLLLVALNM 264



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 18/127 (14%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + S L G LS L G+GGG   VP++S           + +H A+ T+ G     +V S +
Sbjct: 149 ILSPLVGFLSVLMGIGGGSFGVPIMSL--------HGVAIHRAVATAAGFGLIIAVPSVI 200

Query: 88  EH----------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G +N+      I +  +T  +   +   +D   L + F +F LL+
Sbjct: 201 AFLFVDVAGAPPYTIGAVNLPAFLVVIAMTTLTAPLGVKLAHAMDPKPLKRVFGVFLLLV 260

Query: 138 GILMLKR 144
            + ML++
Sbjct: 261 ALNMLRK 267


>gi|152999763|ref|YP_001365444.1| hypothetical protein Shew185_1230 [Shewanella baltica OS185]
 gi|151364381|gb|ABS07381.1| protein of unknown function DUF81 [Shewanella baltica OS185]
          Length = 266

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 65/252 (25%), Positives = 119/252 (47%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D ++    + +      G ++GL G+GGGL++VP L      +GI  +   H+A+ TSL 
Sbjct: 2   DSLLSVFFICLALGAFVGFMAGLLGIGGGLIVVPALLYILPSVGISSAQLPHIAIATSLA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I  TS+ S   H + G I   + K  +  + +  + +  +   +  + L + FAIF +L
Sbjct: 62  AIILTSISSTRAHHKRGNIPWDLFKTMLPGIILGALTSGFIAERISAAALQQGFAIFVVL 121

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           M I M    +    R+ P   + ++   +   ++G +G+GGG+     + F+G  +  A 
Sbjct: 122 MSIQMAYPFKAESNRELPSAPILFVVAALVAMIAGLMGIGGGVLLVPFLTFFGLQMRYAV 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             SA    LI+    L  I +G+    LP  +LGF+ + A+  ++  S+L+ P+  K + 
Sbjct: 182 GFSAATGLLISLSGSLGYIIAGFNAPELPYGTLGFIYLPALFGLVITSVLMAPVGVKAAS 241

Query: 257 MIGKKYLTIGFS 268
                 L   F+
Sbjct: 242 TWPTSVLKKIFA 253


>gi|126173424|ref|YP_001049573.1| hypothetical protein Sbal_1186 [Shewanella baltica OS155]
 gi|304409348|ref|ZP_07390968.1| protein of unknown function DUF81 [Shewanella baltica OS183]
 gi|307303706|ref|ZP_07583459.1| protein of unknown function DUF81 [Shewanella baltica BA175]
 gi|125996629|gb|ABN60704.1| protein of unknown function DUF81 [Shewanella baltica OS155]
 gi|304351866|gb|EFM16264.1| protein of unknown function DUF81 [Shewanella baltica OS183]
 gi|306912604|gb|EFN43027.1| protein of unknown function DUF81 [Shewanella baltica BA175]
          Length = 266

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 65/252 (25%), Positives = 119/252 (47%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D ++    + +      G ++GL G+GGGL++VP L      +GI  +   H+A+ TSL 
Sbjct: 2   DSLLSVFFICLALGAFVGFMAGLLGIGGGLIVVPALLYILPSVGISSAQLPHIAIATSLA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I  TS+ S   H + G I   + K  +  + +  + +  +   +  + L + FAIF +L
Sbjct: 62  AIILTSISSTRAHHKRGNIPWDLFKTMLPGIILGALTSGFIAERISAAALQQGFAIFVVL 121

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           M I M    +    R+ P   + ++   +   ++G +G+GGG+     + F+G  +  A 
Sbjct: 122 MSIQMAYPFKAESNRELPSAPILFVVAALVAMIAGLMGIGGGVLLVPFLTFFGLQMRYAV 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             SA    LI+    L  I +G+    LP  +LGF+ + A+  ++  S+L+ P+  K + 
Sbjct: 182 GFSAATGLLISLSGSLGYIIAGFNAPELPYGTLGFIYLPALFGLVITSVLMAPVGVKAAS 241

Query: 257 MIGKKYLTIGFS 268
                 L   F+
Sbjct: 242 TWPTSVLKKIFA 253


>gi|149913942|ref|ZP_01902474.1| GTP-binding protein EngA [Roseobacter sp. AzwK-3b]
 gi|149812226|gb|EDM72057.1| GTP-binding protein EngA [Roseobacter sp. AzwK-3b]
          Length = 274

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 113/230 (49%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AFQ +G      M + + TSL  I  TS+ S + H + G ++  ILK W   + I
Sbjct: 38  PSFFYAFQTLGYAGPQLMQICLATSLATIIVTSLRSVLSHHKKGAVDWDILKTWAPGIAI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             VV  L+ + +  + L   F +  +++G+ + L R       + P    + +   V GF
Sbjct: 98  GAVVGVLVAASLKSTTLQGVFGVLGIIVGLYLGLGRAHWRLGPQMPSGLTRALMSPVLGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   +M  YG +I++A AT+AG    IA P++   ++        PP +
Sbjct: 158 LSVLMGIGGGSFGVPIMSLYGVAIHRAVATAAGFGITIAVPSVAAFLFLDIAPENRPPLT 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            G VN+ A + ++ ++++ TP   +L++ +  K L   F++ +   +   
Sbjct: 218 FGAVNLVAFVTVIAMTLITTPWGVRLAHAMDAKPLKRIFAVFLTLVALNM 267



 Score = 40.4 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 20/126 (15%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR- 90
           + G LS L G+GGG   VP++S           + +H A+ T+ G     +V S      
Sbjct: 154 VLGFLSVLMGIGGGSFGVPIMSLY--------GVAIHRAVATAAGFGITIAVPSVAAFLF 205

Query: 91  -----------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                        G +N+      I +  ITT     +   +D   L + FA+F  L+ +
Sbjct: 206 LDIAPENRPPLTFGAVNLVAFVTVIAMTLITTPWGVRLAHAMDAKPLKRIFAVFLTLVAL 265

Query: 140 LMLKRD 145
            ML++ 
Sbjct: 266 NMLRKS 271


>gi|170725591|ref|YP_001759617.1| hypothetical protein Swoo_1229 [Shewanella woodyi ATCC 51908]
 gi|169810938|gb|ACA85522.1| protein of unknown function DUF81 [Shewanella woodyi ATCC 51908]
          Length = 264

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 1/262 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +V      +      G ++GL G+GGG++ VP L      +G    I  HVA+ TSL  I
Sbjct: 1   MVLVFISCLALGAFIGFMAGLLGIGGGVIAVPALLILLPSIGFSSDILPHVAIATSLAAI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS+ S   H R G I   I    +  L + ++ +  +   +    L + FA F +LM 
Sbjct: 61  ILTSLSSAQAHHRRGNIPWPIFTTMLPGLILGSICSGFIAKMISAEQLQQIFAFFIILMA 120

Query: 139 ILMLKRDRLYCE-RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           I M+   R+  E +  P     ++  ++   ++  +G+GGGI     + + G  +  A  
Sbjct: 121 IQMVFPFRVAAENKPLPSTLFLFLTSVIIAIIAALMGIGGGILLIPFLSWCGLQMRNAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            S+     I+    L  + +GW ++GLP  +LG+V + A+L I+  S+L+ PL  + +  
Sbjct: 181 FSSASGLFISLFGSLGYVVAGWQVSGLPSGTLGYVYLPALLGIVITSVLMAPLGVRAATH 240

Query: 258 IGKKYLTIGFSMIMFTTSFVFA 279
                L   F++++  T    A
Sbjct: 241 WPTPILKRVFALLLIVTGIKLA 262



 Score = 38.1 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 52/124 (41%), Gaps = 4/124 (3%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIA 79
             + + S +   ++ L G+GGG++++P LS         +G   +  + +++  SLG + 
Sbjct: 140 LFLFLTSVIIAIIAALMGIGGGILLIPFLSWCGLQMRNAIGFSSASGLFISLFGSLGYVV 199

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
               +S +     G + +  L   +    +   +     +H     L + FA+  ++ GI
Sbjct: 200 AGWQVSGLPSGTLGYVYLPALLGIVITSVLMAPLGVRAATHWPTPILKRVFALLLIVTGI 259

Query: 140 LMLK 143
            +  
Sbjct: 260 KLAL 263


>gi|307248970|ref|ZP_07530979.1| hypothetical protein appser2_19320 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306854516|gb|EFM86710.1| hypothetical protein appser2_19320 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 258

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 69/253 (27%), Positives = 117/253 (46%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +V     G L+GLFG+GGGL++VP L     L  +     M  A+GTS   I  T+  S
Sbjct: 3   CLVVGSAVGFLAGLFGIGGGLIIVPSLVYLLPLASVTPENLMAAALGTSFSTIVVTAFSS 62

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H + G +++ + K +I  L ++  +  L +S++D   ++K FA+  L +   ML   
Sbjct: 63  AQRHHKLGNVDVLVSKYFIPALMVSVFLAGLAVSNLDAKLMSKIFAVMVLYLAARMLFSL 122

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
           +   E K        + G V G LS   G+ GG F    +   G  + +A  TS+   A 
Sbjct: 123 KKTPEIKPLTTQSTIVAGGVIGALSSMAGIAGGAFIVPFLNSRGLEMKRAIGTSSFCGAF 182

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           +     +  I SGW +  +P +SLG+V + A+L I   S   + L    + ++    L  
Sbjct: 183 LGLSGTISFIASGWNVETMPDYSLGYVYLPALLGITLTSYFTSKLGANAANVLPVATLKK 242

Query: 266 GFSMIMFTTSFVF 278
            F++++   +   
Sbjct: 243 AFAVMLVAIAINM 255



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IVA  + G LS + G+ GG  +VP L+           + M  A+GTS    A   +   
Sbjct: 137 IVAGGVIGALSSMAGIAGGAFIVPFLN--------SRGLEMKRAIGTSSFCGAFLGLSGT 188

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G + +  L         T+ + +   + +  + L KAFA+  
Sbjct: 189 ISFIASGWNVETMPDYSLGYVYLPALLGITLTSYFTSKLGANAANVLPVATLKKAFAVML 248

Query: 135 LLMGILMLKR 144
           + + I M  +
Sbjct: 249 VAIAINMFVK 258


>gi|302877552|ref|YP_003846116.1| hypothetical protein Galf_0307 [Gallionella capsiferriformans ES-2]
 gi|302580341|gb|ADL54352.1| protein of unknown function DUF81 [Gallionella capsiferriformans
           ES-2]
          Length = 263

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 54/209 (25%), Positives = 97/209 (46%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
           F          +H+A+GTS+  I  T++ S  +H +H  ++  +++     + I T + S
Sbjct: 35  FDAQQFPPEHLLHLALGTSMATIIFTALASLYKHHQHRAVDWNVVRTITPGILIGTGLGS 94

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGV 175
           L+ + +   F+   FA+F       +L   R    R+ P   +  ++G+  G LS  + +
Sbjct: 95  LLATSIPTHFVGILFALFVYFAAAQILFDLRPPVSRQLPGKLIIRLFGVFAGTLSSLVSI 154

Query: 176 GGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           GGG      +L    SI  A  TSA +S  +A    +  + +G   +GLPP SLG+V + 
Sbjct: 155 GGGTVVIPFLLRSNLSIRHAIGTSAAISFPVAIGGTIGYVATGLNASGLPPLSLGYVYLP 214

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLT 264
            +L     S++  PL  K ++ +    L 
Sbjct: 215 CLLWTAAASVITAPLGAKAAHRMNIGVLR 243


>gi|117921480|ref|YP_870672.1| hypothetical protein Shewana3_3041 [Shewanella sp. ANA-3]
 gi|117613812|gb|ABK49266.1| protein of unknown function DUF81 [Shewanella sp. ANA-3]
          Length = 266

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 122/252 (48%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D ++    + +      G ++GL G+GGGL++VP L      +GI  +   H+A+ TSL 
Sbjct: 2   DSLLSVFFICLALGAFVGFMAGLLGIGGGLIVVPALLYILPSVGITSAQLPHIAIATSLA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I  TS+ S   H + G +   + +     + +  +++  +   +  + L + FAIF +L
Sbjct: 62  AIILTSISSARAHHKRGNVPWGLFRTMFPGIILGALMSGFIAEQIPAATLRQGFAIFVML 121

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           M I M    +    R+ P++ V ++  ++   ++G +G+GGG+     + ++G  +  A 
Sbjct: 122 MAIQMAYPFKTESNRELPNSMVLFVVAVIVAAIAGLMGIGGGVLLVPFLTYFGLQMRLAV 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             SA    LI+    L  I +G+    LP  +LG++ + A+  ++  SIL+ P+  K + 
Sbjct: 182 GFSAATGLLISLSGSLGYIIAGFNAPDLPEGTLGYIYLPALFGLIITSILMAPVGVKAAS 241

Query: 257 MIGKKYLTIGFS 268
                 L   F+
Sbjct: 242 TWPTSVLKKIFA 253


>gi|319944545|ref|ZP_08018815.1| integral membrane protein [Lautropia mirabilis ATCC 51599]
 gi|319742181|gb|EFV94598.1| integral membrane protein [Lautropia mirabilis ATCC 51599]
          Length = 271

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 4/229 (1%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L   F   G D ++ +  A+ T+L  I  TS+ S   H R G +   ++      + +
Sbjct: 33  PFLVMIFDHAGHDPAMVVQTALATALATIMFTSLSSMRAHHRKGAVQWHLVWLLAPGILV 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR---LYCERKFPDNYVKYIWGMVT 166
              + S +++ +    L  AFA+F   MG  ML+  R        + P      + G   
Sbjct: 93  GGQLGSRIVAWLPGQVLAVAFALFVGWMGSRMLRGARRVEPDVPARLPGRLGLAVVGTGI 152

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G LS   G GGG  T   +   G  + KA ATSA     IAF   L  +  GW   GLP 
Sbjct: 153 GVLSAIFGAGGGFVTVPFLNSRGVPLPKAIATSAACGFPIAFSGTLGYMVMGW-WQGLPG 211

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            +L ++++ A+  I+P+S+L  P+   +++ +    L   F+ ++F  +
Sbjct: 212 GALAYLDVRALFTIVPMSMLFAPVGAYMAHRLPVPTLKRAFACLLFGLA 260



 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + V     G LS +FG GGG V VP L+           + +  A+ TS     P +   
Sbjct: 145 LAVVGTGIGVLSAIFGAGGGFVTVPFLN--------SRGVPLPKAIATSAACGFPIAFSG 196

Query: 86  FMEHRRHG-----------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
            + +   G            ++++ L   + +  +   V + M   +    L +AFA   
Sbjct: 197 TLGYMVMGWWQGLPGGALAYLDVRALFTIVPMSMLFAPVGAYMAHRLPVPTLKRAFACLL 256

Query: 135 LLMGILMLKR 144
             +   ML R
Sbjct: 257 FGLAGYMLVR 266


>gi|254483115|ref|ZP_05096349.1| conserved domain protein, putative [marine gamma proteobacterium
           HTCC2148]
 gi|214036637|gb|EEB77310.1| conserved domain protein, putative [marine gamma proteobacterium
           HTCC2148]
          Length = 274

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL  A  + G+D +I MHVA+GTSL  I  TS+ S   H   G ++M ++K W   + +
Sbjct: 36  PVLDTALAIRGVDPAIRMHVAVGTSLATIIFTSMSSARAHHAQGAVDMDLVKLWGPFIFV 95

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR-DRLYCERKFPDNYVKYIWGMVTGF 168
            +++ S+  + V  + L   F +  LL+ I ML   D     ++ P      I     G 
Sbjct: 96  GSLMGSVAAAQVQSAVLAGIFGVVALLIAIQMLLPLDNYRPWKQVPKGAGSIITPTFIGG 155

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F+   +      I++A  T++    LIA P  +  I +G G   LP  +
Sbjct: 156 LSAMMGIGGGTFSVATLTMMSQPIHRAVGTASLFGLLIAVPGTIGFIINGLGDPRLPAAN 215

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            G+VN   V +I P+++L+ P+  + ++ + K+ L++ F + +   +   
Sbjct: 216 FGYVNWIGVALIAPMTMLMAPIGARAAHKLSKRALSLAFGVFLLVVAVRM 265



 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+     G LS + G+GGG   V  L+          S  +H A+GT+       +V   
Sbjct: 147 IITPTFIGGLSAMMGIGGGTFSVATLTMM--------SQPIHRAVGTASLFGLLIAVPGT 198

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G +N   +     +  +   + +     + K  L+ AF +F 
Sbjct: 199 IGFIINGLGDPRLPAANFGYVNWIGVALIAPMTMLMAPIGARAAHKLSKRALSLAFGVFL 258

Query: 135 LLMGILMLKR 144
           L++ + ML R
Sbjct: 259 LVVAVRMLAR 268


>gi|296273557|ref|YP_003656188.1| hypothetical protein Arnit_2027 [Arcobacter nitrofigilis DSM 7299]
 gi|296097731|gb|ADG93681.1| protein of unknown function DUF81 [Arcobacter nitrofigilis DSM
           7299]
          Length = 266

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 97/232 (41%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP+ +  F + G +    MH+A+GTS+  I  TS  S   H +   I   +       
Sbjct: 30  IMVPIFTILFAMQGFEHEKIMHLALGTSMATIIFTSFSSMRAHYKKDNIETSMALKIAGG 89

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + + T   + + S++   +L   F +F   +   M  +                  G + 
Sbjct: 90  VLVGTFSATFLASYLKGVYLALFFGVFMSYVAFKMFSKPHYESNPTPHGKVGNIFTGTLI 149

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +S  + +GGG  T   ++     + +A  TSA V   IA    +    +G+G + L  
Sbjct: 150 GAISALVSIGGGSLTVPYLVHQNFDMKRAIGTSAAVGFPIAISGTIGYAINGFGNSDLQN 209

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           + +G++ + AV+I+   SI   PL  K + ++  + L   F ++    S   
Sbjct: 210 YIIGYIYMPAVIIVAISSIFTVPLGVKYASILPTQKLKKVFGVLAVILSIKM 261



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 45/130 (34%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I    L G +S L  +GGG + VP L           +  M  A+GTS  V  P ++   
Sbjct: 143 IFTGTLIGAISALVSIGGGSLTVPYLVH--------QNFDMKRAIGTSAAVGFPIAISGT 194

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           + +               G I M  +         T  +     S +    L K F +  
Sbjct: 195 IGYAINGFGNSDLQNYIIGYIYMPAVIIVAISSIFTVPLGVKYASILPTQKLKKVFGVLA 254

Query: 135 LLMGILMLKR 144
           +++ I M+  
Sbjct: 255 VILSIKMIIS 264


>gi|254464392|ref|ZP_05077803.1| membrane protein [Rhodobacterales bacterium Y4I]
 gi|206685300|gb|EDZ45782.1| membrane protein [Rhodobacterales bacterium Y4I]
          Length = 284

 Score =  186 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AFQ +G      M + + TSL  I  TS+ S M H + G ++  IL+ W   + I
Sbjct: 48  PAFFYAFQTLGYGGDQLMQICLATSLATIIVTSLRSVMSHNKKGAVDWGILRGWGIGIAI 107

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             VV  L  S +  + L   F    L++G  + L R         P    + +     GF
Sbjct: 108 GAVVGVLAASSLRSTVLQGVFGGLALVIGCYLGLGRSEWRLAEAMPKGAKRMVLSPAVGF 167

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG F   LM  +G ++++A AT+AG   +IA P++   +         PP++
Sbjct: 168 LSVLMGIGGGSFGVPLMTLHGVAVHRAVATAAGFGVIIAVPSVAGFLLLEVDPATRPPFT 227

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +G VN+ A  I++ ++++  P   KL++ +  K L   F   +   +   
Sbjct: 228 IGAVNLVAFFIVIAMTLITAPWGVKLAHAMDPKPLKRVFGAFLVLVALNM 277



 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 20/124 (16%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
            G LS L G+GGG   VP+++           + +H A+ T+ G     +V S       
Sbjct: 165 VGFLSVLMGIGGGSFGVPLMTL--------HGVAVHRAVATAAGFGVIIAVPSVAGFLLL 216

Query: 93  ------------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                       G +N+      I +  IT      +   +D   L + F  F +L+ + 
Sbjct: 217 EVDPATRPPFTIGAVNLVAFFIVIAMTLITAPWGVKLAHAMDPKPLKRVFGAFLVLVALN 276

Query: 141 MLKR 144
           ML++
Sbjct: 277 MLRK 280


>gi|15601946|ref|NP_245018.1| hypothetical protein PM0081 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720290|gb|AAK02165.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 264

 Score =  186 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 1/261 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQ-LMGIDDSICMHVAMGTSLGV 77
           +  +  + +     +G L+GLFG+GGGLV+VPVL       +G+ +++ M  A+GTS   
Sbjct: 1   MFTFFLICLAVGAFAGFLAGLFGIGGGLVIVPVLVYLMPKYVGVPEAMVMACALGTSFAT 60

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I  T   S   H + G +   ++K    V+ ITT ++   IS++ K    + FA   + +
Sbjct: 61  IVITGFSSAQRHHKLGNVVWDVVKVLAPVIMITTFISGFFISYLPKDISARLFACLVIYL 120

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            I M    +     K        I G++ G  S A G+GGG F    +   G  + KA  
Sbjct: 121 AIKMFLSVKPKPVTKALTKASTIIAGILIGMASSAAGIGGGGFIVPFLNSRGIDMKKAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA   +L+A   +L  + +GW + GLP +S+G+V + A++ I   SI  + +   ++ +
Sbjct: 181 SSAVCGSLLAIAGMLSFMIAGWKVEGLPEYSMGYVYLPALVGITLTSIFTSKIGATVTSI 240

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +    L   F++++   +   
Sbjct: 241 LPVPILKKAFALMLLILAINM 261


>gi|192361859|ref|YP_001981099.1| hypothetical protein CJA_0576 [Cellvibrio japonicus Ueda107]
 gi|190688024|gb|ACE85702.1| hypothetical integral membrane protein [Cellvibrio japonicus
           Ueda107]
          Length = 275

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 2/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL    Q +G+  +  M VA GTSL VI PTS+ S   H + G ++  ++K W   + I
Sbjct: 39  PVLYFVLQGLGVSPATAMLVATGTSLLVIVPTSISSMRAHHKRGNVDWALIKRWWPWMVI 98

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR-LYCERKFPDNYVKYIWGMVTGF 168
             +  S +        L+  F +  +L+ + ML R +     R+ P    +       GF
Sbjct: 99  GVIAGSSVALRAKGLLLSTVFGVIAILVALNMLLRAKSPPLARQLPGAVGQGSMAGGIGF 158

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
            S  +GVGGG     L+       ++A  T++    LI+ P  L  +++       P   
Sbjct: 159 FSVMMGVGGGTIGVPLLTACNYPSHRAVGTASFFGLLISIPGALAMLFAS-TPADAPEGM 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +G VN+    +I+P+++L+ P+   L   +    L   F++ +  +    
Sbjct: 218 IGAVNLPGFALIVPLTVLLAPVGAWLGAKLDAVMLKRVFAVFLCISGGRM 267



 Score = 43.1 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 19/120 (15%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH- 92
           G  S + GVGGG + VP+L+          +   H A+GT+       S+   +      
Sbjct: 157 GFFSVMMGVGGGTIGVPLLTAC--------NYPSHRAVGTASFFGLLISIPGALAMLFAS 208

Query: 93  ----------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                     G +N+      + +  +   V + + + +D   L + FA+F  + G  ML
Sbjct: 209 TPADAPEGMIGAVNLPGFALIVPLTVLLAPVGAWLGAKLDAVMLKRVFAVFLCISGGRML 268


>gi|254361201|ref|ZP_04977345.1| hypothetical protein MHA_0784 [Mannheimia haemolytica PHL213]
 gi|261492937|ref|ZP_05989482.1| putative permease [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261495080|ref|ZP_05991546.1| putative permease [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|153092692|gb|EDN73741.1| hypothetical protein MHA_0784 [Mannheimia haemolytica PHL213]
 gi|261309246|gb|EEY10483.1| putative permease [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261311389|gb|EEY12547.1| putative permease [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 262

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 65/259 (25%), Positives = 120/259 (46%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +   +      G L+GLFG+GGGL++VP L     + G+     M  A+GTS   I 
Sbjct: 1   MTILLSCLFLGVFVGFLAGLFGIGGGLIIVPSLVFLLPMAGVPPEYIMSTALGTSFSTII 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H + G ++++  K +I  L ++  ++ L++S +D   +++ FA+  L +  
Sbjct: 61  ITAFASAQRHHKLGNVDIQTSKYFIPALMVSVFLSGLVVSRLDPQLMSRIFAVMVLYLAG 120

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M+   +   + K        I G + G L+   G+ GG F    +   G  + +A  TS
Sbjct: 121 KMIFSIKRAPKNKPLTVQTTIIGGSIIGALASMAGIAGGAFIVPFLNDRGLEMKRAIGTS 180

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +   A +     +  I SGWGL G+P +SLG+V + A+  I   S   + +    +  + 
Sbjct: 181 SFCGAFLGLSGTISFIVSGWGLEGMPDYSLGYVYLPALFGITATSFFTSKMGASAANALP 240

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              L   F++++   +   
Sbjct: 241 VPMLKKAFAVLLVCIAINM 259



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+   + G L+ + G+ GG  +VP L+        D  + M  A+GTS    A   +   
Sbjct: 141 IIGGSIIGALASMAGIAGGAFIVPFLN--------DRGLEMKRAIGTSSFCGAFLGLSGT 192

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +                 G + +  L         T+ + +   + +    L KAFA+  
Sbjct: 193 ISFIVSGWGLEGMPDYSLGYVYLPALFGITATSFFTSKMGASAANALPVPMLKKAFAVLL 252

Query: 135 LLMGILMLKR 144
           + + I M  +
Sbjct: 253 VCIAINMFLK 262


>gi|160898228|ref|YP_001563810.1| hypothetical protein Daci_2787 [Delftia acidovorans SPH-1]
 gi|160363812|gb|ABX35425.1| protein of unknown function DUF81 [Delftia acidovorans SPH-1]
          Length = 272

 Score =  186 bits (472), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 2/231 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+      G+   + + +A+ T++  I  TS+ S   H   G +   I++     +  
Sbjct: 33  PFLTYFLDKRGVGPDLSVKMAIATAMATIVFTSISSLRAHHGRGAVRWDIVRSLAPGIIT 92

Query: 110 TTVVTSL-MISHVDKSFLNKAFAIFCLLMGILMLK-RDRLYCERKFPDNYVKYIWGMVTG 167
             ++ SL + + +   +L   F +F   M + ML+   +    R  P     Y  G   G
Sbjct: 93  GGLLASLGVFALLRGKYLALFFGVFIGYMALRMLRSNSQPTATRALPGPLGLYGAGTGLG 152

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           F+SG +G GG   +   M+     ++ A  TSA +   IA       I++G G  G P +
Sbjct: 153 FISGLVGAGGAFISVPFMMRCSVPMHMAVGTSAALGFPIAVVNAAGLIFTGAGDAGRPEY 212

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           SLG++ + A+L +   S+L  PL  + ++ +    L   F+ ++F  +   
Sbjct: 213 SLGYLWLPALLALACCSVLTAPLGARAAHRLPVGQLKRIFATLLFGLAAYM 263



 Score = 43.1 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +  A    G +SGL G GG  + VP + +         S+ MH+A+GTS  +  P +V++
Sbjct: 144 LYGAGTGLGFISGLVGAGGAFISVPFMMRC--------SVPMHMAVGTSAALGFPIAVVN 195

Query: 86  F------------MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
                              G + +  L        +T  + +     +    L + FA  
Sbjct: 196 AAGLIFTGAGDAGRPEYSLGYLWLPALLALACCSVLTAPLGARAAHRLPVGQLKRIFATL 255

Query: 134 CLLMGILMLKR 144
              +   ML +
Sbjct: 256 LFGLAAYMLWK 266


>gi|114321195|ref|YP_742878.1| hypothetical protein Mlg_2046 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227589|gb|ABI57388.1| protein of unknown function DUF81 [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 273

 Score =  185 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 71/249 (28%), Positives = 140/249 (56%), Gaps = 1/249 (0%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
            ++G ++GL GVGGG+V+VPVL   F L+ +D ++ MH+A+GTSL V+ PTS+ S + H 
Sbjct: 18  VVAGIMAGLLGVGGGIVIVPVLFYVFTLLEVDPAVQMHLAVGTSLAVVVPTSLRSAISHH 77

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR-DRLYC 149
           R+GT+++ +L++    L +  V+  L+ + V  + L   F    LL+ + M +     + 
Sbjct: 78  RNGTVDVALLRELWPTLLLGVVLGILLSARVSGAVLTGVFGFVGLLVALNMARAAPPPHL 137

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
             + P  +V+   G   G +S  +G+GGG  +  +       ++++  T+A +  +I+ P
Sbjct: 138 AERAPGPWVRGAIGGFVGTVSTMMGIGGGTLSVPIFQALRFPMHRSVGTAAAIGCIISIP 197

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            ++  +++G G+   PP+S+G+V++   L+I P ++L  P   +L+  +    L   F++
Sbjct: 198 GVIGFLWAGMGVPERPPFSVGYVSLLGFLLIAPTTVLCAPYGVRLAMHLNTVQLRRAFAL 257

Query: 270 IMFTTSFVF 278
            +  T+ + 
Sbjct: 258 FLLITALLM 266



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
                 GT+S + G+GGG + VP+               MH ++GT+  +    S+   +
Sbjct: 149 AIGGFVGTVSTMMGIGGGTLSVPIFQAL--------RFPMHRSVGTAAAIGCIISIPGVI 200

Query: 88  EH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                            G +++           +       +  H++   L +AFA+F L
Sbjct: 201 GFLWAGMGVPERPPFSVGYVSLLGFLLIAPTTVLCAPYGVRLAMHLNTVQLRRAFALFLL 260

Query: 136 LMGILMLKR 144
           +  +LML R
Sbjct: 261 ITALLMLHR 269


>gi|109898370|ref|YP_661625.1| hypothetical protein Patl_2053 [Pseudoalteromonas atlantica T6c]
 gi|109700651|gb|ABG40571.1| protein of unknown function DUF81 [Pseudoalteromonas atlantica T6c]
          Length = 274

 Score =  185 bits (471), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 2/232 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   FQ  G+     M++A GTSL  I PTS+ S   HR+ G ++  +LK W  ++ I
Sbjct: 39  PVLFFLFQSFGVSPESAMYIATGTSLATIIPTSISSIRSHRKKGNVDADLLKQWGLLILI 98

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR-DRLYCERKFPDNYVKYIWGMVTGF 168
             ++ S +++ VD  +L   F I   L  + ML R  +       P    + I     GF
Sbjct: 99  GVLIGSWLVTKVDGRYLTTLFGIVATLSALNMLFRTGKSALANSLPGRIGQSIIAGCIGF 158

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
            S  +G+GGG  +  ++  +    +KA  T+A +  +I+FPA L  +  G      P  +
Sbjct: 159 FSSMVGIGGGTLSVPILTAFNYPAHKAVGTAAAIGLIISFPAALYLLIFGQTPQDAPLGT 218

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM-IMFTTSFVFA 279
            G++N+     I+P++++  P+   ++  +    L   F++ ++ T + + A
Sbjct: 219 FGYINLVGFACIVPLTVICAPIGAGIASKLDANMLKKIFAVVLLITGTRMLA 270



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 20/127 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +   G  S + G+GGG + VP+L+          +   H A+GT+  +    S  + +
Sbjct: 151 IIAGCIGFFSSMVGIGGGTLSVPILTAF--------NYPAHKAVGTAAAIGLIISFPAAL 202

Query: 88  EHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                            G IN+      + +  I   + + + S +D + L K FA+  L
Sbjct: 203 YLLIFGQTPQDAPLGTFGYINLVGFACIVPLTVICAPIGAGIASKLDANMLKKIFAVVLL 262

Query: 136 LMGILML 142
           + G  ML
Sbjct: 263 ITGTRML 269


>gi|152980923|ref|YP_001354870.1| hypothetical protein mma_3180 [Janthinobacterium sp. Marseille]
 gi|151281000|gb|ABR89410.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 264

 Score =  185 bits (471), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 49/230 (21%), Positives = 103/230 (44%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+++  F          +H+A+GT +  I  TS  S  EH +   ++  I+K     L 
Sbjct: 30  VPIMAALFAAQHFAPDHIVHLALGTCMASIVFTSGSSVREHLKFDGVDFDIVKRMTPGLV 89

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           + +++ + + + + +  L  +FA+        ++   +    R  P     +  G++ G 
Sbjct: 90  VGSLLATSVSAWIPQRHLALSFAVIVFFGATQIILNKKPKPSRPLPSAGPLFFVGLIIGI 149

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           + G +  GG   T   ML+ G  + K   T A +   +A    +  + SGW + GLP  +
Sbjct: 150 IGGLVSAGGAFLTIPFMLWCGVPMKKTIGTGAMMGIPLAIVGTIGYVISGWSVPGLPDDA 209

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +GF+++ A+  I+  S+   P   +L++ +    L   F+ +++  +   
Sbjct: 210 VGFISVIALAGIVCGSVFTAPFGARLAHRLPVPVLKRIFACLLYVLAAKM 259


>gi|71278251|ref|YP_270291.1| hypothetical protein CPS_3623 [Colwellia psychrerythraea 34H]
 gi|71143991|gb|AAZ24464.1| putative membrane protein [Colwellia psychrerythraea 34H]
          Length = 264

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 123/261 (47%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++  +   IV   + G L+GL G+GGGL++VP L     ++G+   + M +A+GTSLG 
Sbjct: 1   MILTVLISCIVLGSVVGFLAGLLGIGGGLIIVPALVYLLPMVGVSSDVVMPMALGTSLGA 60

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I  TS  +   H R   I  ++ K  + ++ +  +V + +   +    L + F+   +L+
Sbjct: 61  IVITSTSAAYAHHRKSNIPWQLAKQLMILVAVGALVGAFIADSLSSEALTRFFSFVVILL 120

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
              ML       ER  P  YV  +   +TG +S  +G+ GG      + F+G  +  A  
Sbjct: 121 AAYMLLSINASKERSLPATYVLQLLSFITGIISSLMGIAGGAILVPSLSFFGVPVRHAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +     ++A    L  I +G+ L  LP  SLG++ + A+L I+  S +  P+  K +  
Sbjct: 181 IATACGVMVALFGSLGYIITGFNLPNLPDLSLGYLYLPALLGIVISSSIFAPIGVKYASK 240

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +  K L   F++ +   +   
Sbjct: 241 LPVKTLKKFFAVFLIFVAIKM 261



 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 4/124 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++ + SF++G +S L G+ GG ++VP LS         +GI  +  + VA+  SLG I  
Sbjct: 141 VLQLLSFITGIISSLMGIAGGAILVPSLSFFGVPVRHAIGIATACGVMVALFGSLGYIIT 200

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
              +  +     G + +  L   +    I   +     S +    L K FA+F + + I 
Sbjct: 201 GFNLPNLPDLSLGYLYLPALLGIVISSSIFAPIGVKYASKLPVKTLKKFFAVFLIFVAIK 260

Query: 141 MLKR 144
           M+  
Sbjct: 261 MMIG 264


>gi|90412455|ref|ZP_01220458.1| hypothetical protein P3TCK_13823 [Photobacterium profundum 3TCK]
 gi|90326492|gb|EAS42898.1| hypothetical protein P3TCK_13823 [Photobacterium profundum 3TCK]
          Length = 267

 Score =  185 bits (470), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 65/231 (28%), Positives = 106/231 (45%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP L     L  ID+S+ MH+A+ TSL  I  TS  S   H + G I+  I+K     +
Sbjct: 34  VVPALVWLLPLASIDNSLVMHMALATSLASIVLTSGASARNHIKLGNIDFSIVKSMAPGI 93

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            +  +  S++   V    L K FA   LL+ + ML   R+   R  P        G V G
Sbjct: 94  VLGGLGGSIIAEMVPTELLPKIFASIVLLLALQMLLSMRMTSHRPIPSPMACACSGGVIG 153

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S   G+GGG  T   + ++G  + +A   ++   A+IA   ++  I+SG     LPP 
Sbjct: 154 VISSLAGIGGGSLTVPYLSWHGVEMRRAIGCASLSGAIIAVAGMVGFIFSGLNEAALPPM 213

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           S+G+V + A++ I+  S++ T     L   +    L   F++ +       
Sbjct: 214 SIGYVYLPALIGIVSTSVITTRYGAALVSRLPTMTLKKIFAVFLLFIGSKM 264



 Score = 43.1 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 4/123 (3%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAPT 81
              +  + G +S L G+GGG + VP LS       + +G        +A+   +G I   
Sbjct: 145 CACSGGVIGVISSLAGIGGGSLTVPYLSWHGVEMRRAIGCASLSGAIIAVAGMVGFIFSG 204

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              + +     G + +  L   +    ITT   + ++S +    L K FA+F L +G  M
Sbjct: 205 LNEAALPPMSIGYVYLPALIGIVSTSVITTRYGAALVSRLPTMTLKKIFAVFLLFIGSKM 264

Query: 142 LKR 144
              
Sbjct: 265 FLG 267


>gi|294677315|ref|YP_003577930.1| hypothetical protein RCAP_rcc01778 [Rhodobacter capsulatus SB 1003]
 gi|294476135|gb|ADE85523.1| protein of unknown function DUF81, transmembrane [Rhodobacter
           capsulatus SB 1003]
          Length = 271

 Score =  185 bits (470), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 3/230 (1%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P     F  +G      M V + TS+  I  TS  S   H R G ++ ++L+DW   +  
Sbjct: 38  PAFFYLFNGLGYGSEGLMQVCVATSMATIIITSTRSVTAHARKGAVDWQLLRDWAPAVAG 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             ++   +++ +D   L   F    + + + M   +         P    +  +G + G 
Sbjct: 98  GALLGVFLVTRLDTHALTIIFGTLVMAIALYMAFGKQSWRIAEGMPGRGFRLWFGPLMGA 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  LG+GGG  +  +   +G  I++A ATSAG  A++A P+    + +   +   PP++
Sbjct: 158 VSVLLGIGGGSISTPMQTLHGIPIHRAVATSAGFGAIMAVPSTAAFLLT--PVENAPPYT 215

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           LG +NI A+++I   +++       L++ +  K L   F+  +   +   
Sbjct: 216 LGAINIPALVVIGATTVVTAAWGAALAHRLDPKPLKRLFAGFLMLVALNM 265



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 18/125 (14%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             L G +S L G+GGG +  P+ +           I +H A+ TS G  A  +V S    
Sbjct: 152 GPLMGAVSVLLGIGGGSISTPMQTL--------HGIPIHRAVATSAGFGAIMAVPSTAAF 203

Query: 90  ----------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                        G IN+  L        +T    + +   +D   L + FA F +L+ +
Sbjct: 204 LLTPVENAPPYTLGAINIPALVVIGATTVVTAAWGAALAHRLDPKPLKRLFAGFLMLVAL 263

Query: 140 LMLKR 144
            ML++
Sbjct: 264 NMLRK 268


>gi|88704402|ref|ZP_01102116.1| membrane protein [Congregibacter litoralis KT71]
 gi|88701453|gb|EAQ98558.1| membrane protein [Congregibacter litoralis KT71]
          Length = 267

 Score =  184 bits (469), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 83/263 (31%), Positives = 123/263 (46%), Gaps = 3/263 (1%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++ +I L+  A  ++G  +GLFGVGGG V+VP L   F  +       M VA+GTSL  I
Sbjct: 1   MLMFIVLLSGAGMIAGLTAGLFGVGGGFVVVPALLAVFPFLTDQTDNLMMVAVGTSLATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             +S  +   H +   ++  +LKDW   + +  +    + S  D   L   FA+  L+  
Sbjct: 61  VVSSARAVHAHNKRDAVDFALLKDWAVWVLMGVLAGLWIASMADSERLIMVFAVGVLIYS 120

Query: 139 ILMLKR---DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           I  L     DR       P    K       G  S  LG+GGG  T L M+     I++A
Sbjct: 121 IYFLFPSMFDRFKGRWAMPTGAGKAALASGLGGFSALLGIGGGTITVLTMVICNRPIHQA 180

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            AT++GV  LI  P +L  +  G G + LP  SLG+VN+ A+  I   S+L  PL  KL+
Sbjct: 181 VATASGVGFLIGLPGMLGFVVMGLGADNLPIGSLGYVNMPALAAIAFFSVLTAPLGAKLA 240

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
           + +    L   F + +   S   
Sbjct: 241 HSLDANQLKRIFGVYLVVVSVSM 263



 Score = 38.9 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 20/123 (16%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR--- 90
           G  S L G+GGG + V  +           +  +H A+ T+ GV     +   +      
Sbjct: 152 GGFSALLGIGGGTITVLTMVIC--------NRPIHQAVATASGVGFLIGLPGMLGFVVMG 203

Query: 91  ---------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                      G +NM  L    F   +T  + + +   +D + L + F ++ +++ + M
Sbjct: 204 LGADNLPIGSLGYVNMPALAAIAFFSVLTAPLGAKLAHSLDANQLKRIFGVYLVVVSVSM 263

Query: 142 LKR 144
             +
Sbjct: 264 FIK 266


>gi|217974284|ref|YP_002359035.1| hypothetical protein Sbal223_3127 [Shewanella baltica OS223]
 gi|217499419|gb|ACK47612.1| protein of unknown function DUF81 [Shewanella baltica OS223]
          Length = 266

 Score =  184 bits (469), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 65/252 (25%), Positives = 119/252 (47%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D ++    + +      G ++GL G+GGGL++VP L      +GI  +   H+A+ TSL 
Sbjct: 2   DSLLSVFFICLALGAFVGFMAGLLGIGGGLIVVPALLYILPSVGISSAQLPHIAIATSLA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I  TS+ S   H + G I   + K  +  + +  + +  +   +  + L + FAIF +L
Sbjct: 62  AIILTSISSTRAHHKRGNIPWDLFKTMLPGIILGALTSGFIAERISAAALQQGFAIFVVL 121

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           M I M    +    R+ P   + ++   +   ++G +G+GGG+     + F+G  +  A 
Sbjct: 122 MSIQMAYPFKAESNRELPSAPILFVVAALVAMVAGLMGIGGGVLLVPFLTFFGLQMRYAV 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             SA    LI+    L  I +G+    LP  +LGF+ + A+  ++  S+L+ P+  K + 
Sbjct: 182 GFSAATGLLISLSGSLGYIIAGFNAPELPYGTLGFIYLPALFGLVITSVLMAPVGVKAAS 241

Query: 257 MIGKKYLTIGFS 268
                 L   F+
Sbjct: 242 TWPTSVLKKIFA 253


>gi|332306576|ref|YP_004434427.1| hypothetical protein Glaag_2214 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332173905|gb|AEE23159.1| protein of unknown function DUF81 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 274

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 2/232 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   FQ  G+     M++A GTSL  I PTS+ S   HR+ G ++  +LK W  ++ +
Sbjct: 39  PVLFFLFQSFGVSPQSAMYIATGTSLATIIPTSISSIRSHRKKGNVDAALLKQWGALILV 98

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR-DRLYCERKFPDNYVKYIWGMVTGF 168
             +V S +++ VD  +L   F I   L  + ML R  +       P    + I     GF
Sbjct: 99  GVLVGSWLVTKVDGRYLTTLFGIVATLSALNMLFRTGKSALAESLPGRVGQSIMAACIGF 158

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
            S  +G+GGG  +  ++  +    +KA  T+A +  +I+ PA L  +  G      P  +
Sbjct: 159 FSSMVGIGGGTLSVPILTAFNYPAHKAVGTAAAIGLIISLPAALYLLMFGQTPQDAPLGT 218

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM-IMFTTSFVFA 279
            G++N+   + I+P+++L  P+   ++  +    L   F++ ++ T + + A
Sbjct: 219 YGYINLVGFVCIVPLTVLCAPIGAGIASKLDANMLKKIFAVVLLITGTRMLA 270



 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 20/127 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +   G  S + G+GGG + VP+L+          +   H A+GT+  +    S+ + +
Sbjct: 151 IMAACIGFFSSMVGIGGGTLSVPILTAF--------NYPAHKAVGTAAAIGLIISLPAAL 202

Query: 88  EHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                           +G IN+      + +  +   + + + S +D + L K FA+  L
Sbjct: 203 YLLMFGQTPQDAPLGTYGYINLVGFVCIVPLTVLCAPIGAGIASKLDANMLKKIFAVVLL 262

Query: 136 LMGILML 142
           + G  ML
Sbjct: 263 ITGTRML 269


>gi|160874382|ref|YP_001553698.1| hypothetical protein Sbal195_1263 [Shewanella baltica OS195]
 gi|160859904|gb|ABX48438.1| protein of unknown function DUF81 [Shewanella baltica OS195]
 gi|315266617|gb|ADT93470.1| protein of unknown function DUF81 [Shewanella baltica OS678]
          Length = 266

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 64/252 (25%), Positives = 117/252 (46%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D ++    + +      G ++GL G+GGGL++VP L      +GI  +   H+A+ TSL 
Sbjct: 2   DSLLSVFFICLALGAFVGFMAGLLGIGGGLIVVPALLYILPSVGISSAQLPHIAIATSLA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I  TS+ S   H + G I   + K  +  + +  + +  +   +  + L + FAIF +L
Sbjct: 62  AIILTSISSTRAHHKRGNIPWDLFKTMLPGIILGALTSGFIAERISAAALQQGFAIFVVL 121

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           M I M    +    R+ P   + ++   +   ++G +G+GGG+     + F+G  +  A 
Sbjct: 122 MSIQMAYPFKAESNRELPSAPILFVVAALVAMIAGLMGIGGGVLLVPFLTFFGLQMRYAV 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             SA    LI+       I +G     LP  +LGF+ + A+  ++  S+L+ P+  K + 
Sbjct: 182 GFSAATGLLISLSGSFGYIIAGLNAPELPYGTLGFIFLPALFGLVITSVLMAPVGVKAAS 241

Query: 257 MIGKKYLTIGFS 268
                 L   F+
Sbjct: 242 TWPTSVLKKIFA 253


>gi|126461352|ref|YP_001042466.1| hypothetical protein Rsph17029_0578 [Rhodobacter sphaeroides ATCC
           17029]
 gi|126103016|gb|ABN75694.1| protein of unknown function DUF81 [Rhodobacter sphaeroides ATCC
           17029]
          Length = 272

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 75/252 (29%), Positives = 123/252 (48%), Gaps = 3/252 (1%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
                +G ++GL GVGGGLV+VP    AF+ MG      M V + TSL  I  TS+ S  
Sbjct: 16  AIGAFAGIIAGLLGVGGGLVLVPAYLYAFEAMGYGGPSLMRVCLATSLATIIVTSLRSVH 75

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDR 146
            H R G ++++IL+ W   + +  V  + + S +    L   F    + +G+ M   R  
Sbjct: 76  AHHRKGAVDLEILRRWGPWIALGAVAGTFLASSMKSVVLQGIFGGVGVAVGLYMAFGRTS 135

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
                  P    +   G   G LS  +G+GGG F   LM  +   I++A AT+AG   +I
Sbjct: 136 WRLGESLPQGAARAATGTGVGLLSVLMGIGGGTFGVPLMSLFNVPIHRAVATAAGFGVII 195

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           A P+  + +++    +  PP ++G VN+ A  I + +++L TPL  KL++ +  K L   
Sbjct: 196 ALPSAALFLFT--PTDAAPPLTVGAVNLPAFGITIAMTLLTTPLGVKLAHAMDPKPLKRV 253

Query: 267 FSMIMFTTSFVF 278
           F++ +   +   
Sbjct: 254 FAVFIMIVALNM 265



 Score = 42.4 bits (99), Expect = 0.080,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 18/128 (14%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
                  G LS L G+GGG   VP++S          ++ +H A+ T+ G     ++ S 
Sbjct: 149 AATGTGVGLLSVLMGIGGGTFGVPLMSLF--------NVPIHRAVATAAGFGVIIALPSA 200

Query: 87  MEHRRH----------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                           G +N+      I +  +TT +   +   +D   L + FA+F ++
Sbjct: 201 ALFLFTPTDAAPPLTVGAVNLPAFGITIAMTLLTTPLGVKLAHAMDPKPLKRVFAVFIMI 260

Query: 137 MGILMLKR 144
           + + ML++
Sbjct: 261 VALNMLRK 268


>gi|297539002|ref|YP_003674771.1| hypothetical protein M301_1819 [Methylotenera sp. 301]
 gi|297258349|gb|ADI30194.1| protein of unknown function DUF81 [Methylotenera sp. 301]
          Length = 267

 Score =  183 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 66/259 (25%), Positives = 117/259 (45%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +++I L I      G +SGL GVGGG ++VP+ +  F   G      +H+A+GTSL  + 
Sbjct: 4   IEWIILYIALGSFVGFMSGLLGVGGGGLLVPLFASIFIYQGFSADSVVHLALGTSLACMI 63

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S  S   H   G +   ++K     + +   + + + SHV+ S++   FA+F  L+ +
Sbjct: 64  ISSASSLRAHAYRGAVMWDVVKGMTPGIILGAFIATQIASHVNSSYIAIFFALFMALVAL 123

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
               + +     K        + G+  G +S    VGGG  T + + +    I ++  TS
Sbjct: 124 QTFIKWQPKPSHKPRTLLGLIMSGLGIGAISALAAVGGGFLTVVYLGYKNVDIKRSIGTS 183

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A +   IA    +  + +GW      P++ GF+ I A L I   S +  P   + S+ + 
Sbjct: 184 AAIGFPIAITGTIGYMINGWAATMDEPYTFGFIYIPAFLAISISSAISAPYGARRSHNMP 243

Query: 260 KKYLTIGFSMIMFTTSFVF 278
           +  L   F++I    S   
Sbjct: 244 EANLKKIFAIICMVLSIKM 262


>gi|254514443|ref|ZP_05126504.1| membrane protein [gamma proteobacterium NOR5-3]
 gi|219676686|gb|EED33051.1| membrane protein [gamma proteobacterium NOR5-3]
          Length = 272

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 81/268 (30%), Positives = 127/268 (47%), Gaps = 3/268 (1%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           ++   ++ ++ L+  A  ++G  +GLFGVGGG V+VP L   F  +G      M VA+GT
Sbjct: 1   MALTDMLLFLALMSGAGMIAGITAGLFGVGGGFVVVPALLAVFPFLGDQSEDLMLVAVGT 60

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           SL  I  +S  S   H + G ++ ++L+DW   + +       + S  +   L   FAI 
Sbjct: 61  SLATIVVSSARSVHAHSKRGAVDFQLLRDWALWVILGVGAGIWVASVSNSQRLILVFAIG 120

Query: 134 CLLMGILMLKR---DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            L+  I  L     DR +     P    K +     G  S  LG+GGG    L M+    
Sbjct: 121 VLIYSIYFLFPRIFDRYHGRFSLPTGPGKALLASGLGGFSALLGIGGGTVMVLAMVLCNR 180

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            I++A AT++GV  LI  P ++  +  G G   LP  S+G++NI A+L I   SI   P+
Sbjct: 181 PIHQAVATASGVGFLIGVPGMIGFMVMGLGAENLPVGSIGYINIPALLAIAVFSIFTAPI 240

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             +L++ +    L   F M +   S   
Sbjct: 241 GARLAHSLDGARLKQIFGMYLVIVSVSM 268



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 21/130 (16%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++AS L G  + L G+GGG VMV  +           +  +H A+ T+ GV     V   
Sbjct: 151 LLASGLGGFSA-LLGIGGGTVMVLAMVLC--------NRPIHQAVATASGVGFLIGVPGM 201

Query: 87  MEHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +     G             IN+  L         T  + + +   +D + L + F ++ 
Sbjct: 202 IGFMVMGLGAENLPVGSIGYINIPALLAIAVFSIFTAPIGARLAHSLDGARLKQIFGMYL 261

Query: 135 LLMGILMLKR 144
           +++ + M  +
Sbjct: 262 VIVSVSMFLK 271


>gi|114771778|ref|ZP_01449171.1| membrane protein [alpha proteobacterium HTCC2255]
 gi|114547594|gb|EAU50485.1| membrane protein [alpha proteobacterium HTCC2255]
          Length = 274

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 130/260 (50%), Gaps = 1/260 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L+++    +G L+GL GVGGG+V+VP    AF  +G  +   M + + TSL  I 
Sbjct: 8   LPTIVLLLIVGAFAGILAGLLGVGGGIVLVPAFFYAFTSLGYVNEQLMQICVATSLATIV 67

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ S + H +   +  +IL+ W   +    V+   + + +    L   F +  +L+G+
Sbjct: 68  FTSIRSVLSHNKKNMVEWQILRLWSGGIVFGAVIGVFIAAKLHTDTLTIIFGLLGILIGL 127

Query: 140 LM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
            M   +       + P  +V+ I     GFLS  +G+GGG     LM  +   I+KA AT
Sbjct: 128 YMAFSKSDWSLGNQMPVGFVRTIISTFVGFLSVLMGIGGGSLAVPLMTLHSIKIHKAVAT 187

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
            AG    IAFP+    ++S     GLPP ++G+VN  A +I++ +++L  P+   L++ +
Sbjct: 188 GAGFGLAIAFPSTFGFLFSNPPSAGLPPMTIGYVNFPAFIIVISMTMLTAPIGANLAHKL 247

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F+  + + +F  
Sbjct: 248 NVIVLKRIFAFFLISVAFNM 267



 Score = 42.0 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 4/121 (3%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           + S   G LS L G+GGG + VP+++       + +       + +A  ++ G +     
Sbjct: 150 IISTFVGFLSVLMGIGGGSLAVPLMTLHSIKIHKAVATGAGFGLAIAFPSTFGFLFSNPP 209

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + +     G +N       I +  +T  + + +   ++   L + FA F + +   ML 
Sbjct: 210 SAGLPPMTIGYVNFPAFIIVISMTMLTAPIGANLAHKLNVIVLKRIFAFFLISVAFNMLY 269

Query: 144 R 144
           +
Sbjct: 270 K 270


>gi|33151424|ref|NP_872777.1| hypothetical protein HD0173 [Haemophilus ducreyi 35000HP]
 gi|33147644|gb|AAP95166.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
          Length = 263

 Score =  182 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 99/230 (43%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L      +G+     M  A+GTS   I  T+  S   H + G ++++I +  I  L 
Sbjct: 31  VPSLVYLLPTVGVMPENLMATALGTSFATIVITAFSSAQRHNKLGNVDVRISRYLIPALM 90

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           ++  + SL+ISH+D     K FA+  + +   M+       + K        + G+  G 
Sbjct: 91  VSVFLASLLISHLDPKLTTKIFAVMVIYLAARMVFSLHKTVKIKPLTTSTTLMAGVTIGA 150

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S   G+ GG F    +   G ++  A  TS+   A +     L  + SGW    LP +S
Sbjct: 151 ISSMAGIAGGAFIVPFLNNRGLNMRAAIGTSSFCGAFLGLAGALSYMLSGWNSANLPAYS 210

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           LG+V + A+  I   S   + L    + ++    L   F++++   +   
Sbjct: 211 LGYVYLPALFGITLTSYFTSKLGANAANVLPVPMLKKAFAVLLVCIAINM 260



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A    G +S + G+ GG  +VP L+        +  + M  A+GTS    A   +   
Sbjct: 142 LMAGVTIGAISSMAGIAGGAFIVPFLN--------NRGLNMRAAIGTSSFCGAFLGLAGA 193

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           + +               G + +  L         T+ + +   + +    L KAFA+  
Sbjct: 194 LSYMLSGWNSANLPAYSLGYVYLPALFGITLTSYFTSKLGANAANVLPVPMLKKAFAVLL 253

Query: 135 LLMGILMLKR 144
           + + I M  +
Sbjct: 254 VCIAINMFLK 263


>gi|332993616|gb|AEF03671.1| hypothetical protein ambt_10745 [Alteromonas sp. SN2]
          Length = 272

 Score =  182 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 2/268 (0%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M FL  +  V  I  +I     +G L+GL GVGGG+V+VPVL   FQ +G+     M +A
Sbjct: 1   MQFLLDNMTV--ILSLIGTGVFAGLLAGLLGVGGGIVIVPVLFFLFQALGVSAESAMVIA 58

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
             TSL  I PTS+ S   H   G ++  +LK W   + I  +  S +++ +D +FL   F
Sbjct: 59  TATSLATIVPTSISSIRAHHSKGNVDFALLKAWAVFILIGVLAGSYLVTVLDANFLTLMF 118

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            +   L  I ML   +       P    + I     GF S  +G+GGG  T   + F   
Sbjct: 119 GVIATLSAINMLVGKKDALFNGLPGRVGQSIMAACIGFFSSMVGIGGGTLTVPTLTFCNY 178

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
             ++A  T+A V  +I+ PA +  ++ G      P  + G+VN+     I+P++++  P+
Sbjct: 179 PAHRAVGTAAAVGLIISLPAAITLLFVGTTPVDAPFATYGYVNLLGFACIVPLTVIFAPI 238

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              ++  +    L   F++++  T    
Sbjct: 239 GASIANKLDAGLLKKIFAVVLIITGLRM 266



 Score = 46.2 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 20/127 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +   G  S + G+GGG + VP L+          +   H A+GT+  V    S+ + +
Sbjct: 149 IMAACIGFFSSMVGIGGGTLTVPTLTFC--------NYPAHRAVGTAAAVGLIISLPAAI 200

Query: 88  E------------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                           +G +N+      + +  I   + + + + +D   L K FA+  +
Sbjct: 201 TLLFVGTTPVDAPFATYGYVNLLGFACIVPLTVIFAPIGASIANKLDAGLLKKIFAVVLI 260

Query: 136 LMGILML 142
           + G+ ML
Sbjct: 261 ITGLRML 267


>gi|221638337|ref|YP_002524599.1| hypothetical protein RSKD131_0238 [Rhodobacter sphaeroides KD131]
 gi|221159118|gb|ACM00098.1| Hypothetical Protein RSKD131_0238 [Rhodobacter sphaeroides KD131]
          Length = 272

 Score =  182 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 74/252 (29%), Positives = 123/252 (48%), Gaps = 3/252 (1%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
                +G ++GL GVGGGLV+VP    AF+ MG      M V + TSL  I  TS+ S  
Sbjct: 16  AIGAFAGIIAGLLGVGGGLVLVPAYLYAFEAMGYGGPSLMRVCLATSLATIIVTSLRSVH 75

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDR 146
            H R G ++++IL+ W   + +  V  + + S +    L   F    + +G+ M   +  
Sbjct: 76  AHHRKGAVDLEILRRWGPWIALGAVAGTFLASSMKSVVLQGIFGGVGVAVGLYMAFGKTS 135

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
                  P    +   G   G LS  +G+GGG F   LM  +   I++A AT+AG   +I
Sbjct: 136 WRLGESLPQGAARAATGTGVGLLSVLMGIGGGTFGVPLMSLFNVPIHRAVATAAGFGVII 195

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           A P+  + +++    +  PP ++G VN+ A  I + +++L TPL  KL++ +  K L   
Sbjct: 196 ALPSAALFLFT--PTDAAPPLAVGAVNLPAFGITIAMTLLTTPLGVKLAHAMDPKPLKRV 253

Query: 267 FSMIMFTTSFVF 278
           F++ +   +   
Sbjct: 254 FAVFIMIVALNM 265



 Score = 42.4 bits (99), Expect = 0.079,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 18/128 (14%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
                  G LS L G+GGG   VP++S          ++ +H A+ T+ G     ++ S 
Sbjct: 149 AATGTGVGLLSVLMGIGGGTFGVPLMSLF--------NVPIHRAVATAAGFGVIIALPSA 200

Query: 87  MEHR----------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                           G +N+      I +  +TT +   +   +D   L + FA+F ++
Sbjct: 201 ALFLFTPTDAAPPLAVGAVNLPAFGITIAMTLLTTPLGVKLAHAMDPKPLKRVFAVFIMI 260

Query: 137 MGILMLKR 144
           + + ML++
Sbjct: 261 VALNMLRK 268


>gi|237808701|ref|YP_002893141.1| hypothetical protein Tola_1956 [Tolumonas auensis DSM 9187]
 gi|237500962|gb|ACQ93555.1| protein of unknown function DUF81 [Tolumonas auensis DSM 9187]
          Length = 272

 Score =  182 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 1/264 (0%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
              V   +  +++   ++G L+GL GVGGG+VMVPVL   FQ   +     + +A GTSL
Sbjct: 4   IQSVAPILLALVMTGVVAGILAGLLGVGGGIVMVPVLYFIFQSFEVAPQHAILLATGTSL 63

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
             + PTS+MS    ++ G ++  +LK W   L I  +  + + +H    +L   F    +
Sbjct: 64  AAMIPTSIMSIRSQKKRGNVDTDLLKRWGIFLLIGVLAGAALATHFGGVWLTAMFGSLAM 123

Query: 136 LMGILMLKRDRLYC-ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
           L+ + ML R +      + P   V+    MV G +S  +G+GGG  +  ++       ++
Sbjct: 124 LVSLNMLFRAKAKPFATELPGKAVQSFIAMVIGSVSVMIGIGGGTLSVPILTSCNYPPHR 183

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A  TS+ +  LI+ P  +  + +G      P  ++G VN+     I+P+S++  P+  +L
Sbjct: 184 AVGTSSAIGLLISVPGAITMLVTGTTPADAPFGTIGLVNLLGFACIVPMSVVFAPVGVRL 243

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
              +    L   F++ +  T    
Sbjct: 244 GQKLNPVRLKQVFAVALAFTGARM 267



 Score = 35.8 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
             + + G++S + G+GGG + VP+L+          +   H A+GTS  +    SV   +
Sbjct: 150 FIAMVIGSVSVMIGIGGGTLSVPILTSC--------NYPPHRAVGTSSAIGLLISVPGAI 201

Query: 88  EHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                GT            +N+      + +  +   V   +   ++   L + FA+   
Sbjct: 202 TMLVTGTTPADAPFGTIGLVNLLGFACIVPMSVVFAPVGVRLGQKLNPVRLKQVFAVALA 261

Query: 136 LMGILMLKR 144
             G  ML  
Sbjct: 262 FTGARMLFS 270


>gi|301169621|emb|CBW29222.1| predicted permease [Haemophilus influenzae 10810]
          Length = 264

 Score =  182 bits (463), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 1/261 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +  +I L ++   L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I
Sbjct: 1   MFTFILLCLLVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T + S   H + G I  + ++    V+  +  +  L I  +D+    K FA   + + 
Sbjct: 61  VITGIGSAQRHHKLGNIVWQAVRILAPVIMFSVFICGLFIGRLDREISAKIFACLVVYLA 120

Query: 139 ILMLKR-DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             M+    +     K        I G++ G  S A G+GGG F    +   G +I +A  
Sbjct: 121 TKMVLSIKKDQVTTKSLTPLSSVIGGILIGMTSSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATAK 240

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +    L  GF++ +   +   
Sbjct: 241 LPVSTLKKGFALFLIVVAINM 261


>gi|239995599|ref|ZP_04716123.1| membrane protein [Alteromonas macleodii ATCC 27126]
          Length = 273

 Score =  182 bits (462), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 74/262 (28%), Positives = 121/262 (46%), Gaps = 4/262 (1%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++ ++  + +   ++G  +GLFG GGG V+VP L   F          + VA+GTSL  
Sbjct: 4   ELLWFVVTLCITGAIAGITAGLFGNGGGFVVVPALLAVFPFFTPPSEALVKVAIGTSLAS 63

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I  +S  S M HR  G ++  IL+ W   L +      L+ ++   + L   FA   LL 
Sbjct: 64  IVVSSARSVMAHRAKGAVDFDILRSWSIWLILGVGGGLLIANNSSANGLTVVFAAGVLLY 123

Query: 138 GILMLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            +  L  +   R       P    K +   V G  S  LG+GGG  T + M+    +I +
Sbjct: 124 SVYFLFPEFVVRPGLVFDMPKGIGKAVLAFVLGGFSALLGIGGGTPTVITMVMCQRTIQQ 183

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNG-LPPWSLGFVNIGAVLIILPISILITPLATK 253
           A AT+AGV  LI  P  +  ++        LP  ++G++NI A++ I   +I   P+  K
Sbjct: 184 AVATAAGVGFLIGLPGAIGFLFMKHPETASLPVGTIGYINIPALIAISIGAIFTAPIGAK 243

Query: 254 LSYMIGKKYLTIGFSMIMFTTS 275
           +++   +K L   F + +   S
Sbjct: 244 MAHNFSEKKLKRLFGIYLVIVS 265


>gi|332142711|ref|YP_004428449.1| membrane protein [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552733|gb|AEA99451.1| membrane protein [Alteromonas macleodii str. 'Deep ecotype']
          Length = 273

 Score =  182 bits (462), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 74/262 (28%), Positives = 121/262 (46%), Gaps = 4/262 (1%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++ ++  + +   ++G  +GLFG GGG V+VP L   F          + VA+GTSL  
Sbjct: 4   ELLWFVVTLCITGTIAGITAGLFGNGGGFVVVPALLAVFPFFTPPSEALVKVAIGTSLAS 63

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I  +S  S M HR  G ++  IL+ W   L +      L+ ++   + L   FA   LL 
Sbjct: 64  IVVSSARSVMAHRAKGAVDFDILRSWSIWLILGVGGGLLIANNSSANGLTVVFAAGVLLY 123

Query: 138 GILMLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            +  L  +   R       P    K +   V G  S  LG+GGG  T + M+    +I +
Sbjct: 124 SVYFLFPEFVVRPGLVFNMPKGIGKAVLAFVLGGFSALLGIGGGTPTVITMVMCQRTIQQ 183

Query: 195 ATATSAGVSALIAFPALLVRIYSGW-GLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           A AT+AGV  LI  P  +  ++        LP  ++G++NI A++ I   +I   P+  K
Sbjct: 184 AVATAAGVGFLIGLPGAIGFLFMKHPDTASLPVGTIGYINIPALVAISIGAIFTAPIGAK 243

Query: 254 LSYMIGKKYLTIGFSMIMFTTS 275
           +++   +K L   F + +   S
Sbjct: 244 MAHNFSEKKLKRLFGIYLVIVS 265


>gi|253995635|ref|YP_003047699.1| hypothetical protein Mmol_0262 [Methylotenera mobilis JLW8]
 gi|253982314|gb|ACT47172.1| protein of unknown function DUF81 [Methylotenera mobilis JLW8]
          Length = 267

 Score =  182 bits (462), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 65/259 (25%), Positives = 118/259 (45%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +++I L +V     G ++GL GVGGG ++VP+L   F   G+     +H+A+GTSL  + 
Sbjct: 4   IEWILLYLVLGAFVGFMAGLLGVGGGGILVPILVTIFSYQGVGQESVVHLALGTSLACMI 63

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S  S   H   GT+  K++ + +  + +   + + + + V+ +++   FA+F  L+  
Sbjct: 64  ISSSSSIYAHASRGTVVWKVVYEMVLGIVLGAFLVTHLAADVNPTYIAIFFALFMALVAG 123

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M    +             ++ G + G +S    VGGG      + +    I KA  TS
Sbjct: 124 QMFLNWKPKPSTNPTKLRSLFVAGTLIGMVSSLAAVGGGFLAVTYLSYKNIDIKKAIGTS 183

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A +   IA    +  + SGW      P++ GF+ + A L+I   S +  PL    S  + 
Sbjct: 184 AAIGFPIAIAGTVGYMISGWSKTLNEPYTFGFIYLPAFLVISIASFIAAPLGASCSNNLP 243

Query: 260 KKYLTIGFSMIMFTTSFVF 278
           +  L   F+++    S   
Sbjct: 244 EARLKKIFAIVSLILSVKM 262



 Score = 42.8 bits (100), Expect = 0.059,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 20/131 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + VA  L G +S L  VGGG + V  LS          +I +  A+GTS  +  P ++  
Sbjct: 143 LFVAGTLIGMVSSLAAVGGGFLAVTYLSY--------KNIDIKKAIGTSAAIGFPIAIAG 194

Query: 86  FMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            + +               G I +           I   + +   +++ ++ L K FAI 
Sbjct: 195 TVGYMISGWSKTLNEPYTFGFIYLPAFLVISIASFIAAPLGASCSNNLPEARLKKIFAIV 254

Query: 134 CLLMGILMLKR 144
            L++ + ML  
Sbjct: 255 SLILSVKMLFS 265


>gi|212636536|ref|YP_002313061.1| hypothetical protein swp_3794 [Shewanella piezotolerans WP3]
 gi|212558020|gb|ACJ30474.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 266

 Score =  181 bits (461), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 67/253 (26%), Positives = 116/253 (45%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           + +    + G ++GL G+GGGL+ VP L      +GI      HVA+ TSL  I  TS+ 
Sbjct: 10  ICLALGAVIGFMAGLLGIGGGLIAVPALLHILPGVGIPAEHLPHVAIATSLAAIILTSLS 69

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S   H +   I  ++ +  +    +  + +  +   ++ SFL + FAIF +LM I M   
Sbjct: 70  SARAHHKRENIPWELFRSMMPGFVLGAICSGFISELIEASFLQQIFAIFVILMAIQMAFP 129

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            R    R  P     +   ++   ++G +G+GGG+     + + G  +  A   S+    
Sbjct: 130 FRPNSNRSMPSTVSLFFAAVIIAIIAGMMGIGGGVLLIPFLTWCGLQMRYAIGFSSATGL 189

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           LIA    +    +GW ++ LP  ++GF+ + A++ I   SILI PL  K +       L 
Sbjct: 190 LIALFGSIGYTLAGWNVDTLPEGTIGFIYLPALVGIATTSILIAPLGAKAATNWPTAKLK 249

Query: 265 IGFSMIMFTTSFV 277
             F++ +      
Sbjct: 250 KIFAVFLAFVGLK 262


>gi|110633864|ref|YP_674072.1| hypothetical protein Meso_1511 [Mesorhizobium sp. BNC1]
 gi|110284848|gb|ABG62907.1| protein of unknown function DUF81 [Chelativorans sp. BNC1]
          Length = 278

 Score =  181 bits (461), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 89/258 (34%), Positives = 141/258 (54%), Gaps = 1/258 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +   +I A  L G ++GL GVGGG+V+VPVL      + +D+SI M +A+ TSL  I  T
Sbjct: 12  FAAAMIFAGVLGGFIAGLLGVGGGIVIVPVLYFVLGGLSVDESIRMKIAVATSLSTILFT 71

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S   H R G+I+  +LK W   + I  V  + + ++V    L   FAI  LL+ + M
Sbjct: 72  SLSSAGAHYRKGSIDFALLKSWAVPVFIGVVAGTALAAYVSGIVLTAVFAIVALLVAVNM 131

Query: 142 LKRDRLYC-ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
             R +       FP+ +VK   G V G +S  +G+GGG  +  +   +G  I KA  T+A
Sbjct: 132 TLRAKSEALADDFPNRFVKAFCGFVVGAISAMMGIGGGTLSVPIQTAFGCDIRKAVGTAA 191

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  +IA P  +  + +GW  +GLP  SLGFVN+ A+  ++P+++ + PL  K ++ I K
Sbjct: 192 AIGFIIAIPGAIGYMIAGWNADGLPAGSLGFVNLVALGALIPLTMGVAPLGAKAAHAIPK 251

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L+  F++ +  TS   
Sbjct: 252 AVLSYSFAVFLALTSMRM 269



 Score = 35.8 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 52/119 (43%), Gaps = 4/119 (3%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            F+ G +S + G+GGG + VP+ +       + +G   +I   +A+  ++G +       
Sbjct: 154 GFVVGAISAMMGIGGGTLSVPIQTAFGCDIRKAVGTAAAIGFIIAIPGAIGYMIAGWNAD 213

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +     G +N+  L   I +      + +     + K+ L+ +FA+F  L  + ML  
Sbjct: 214 GLPAGSLGFVNLVALGALIPLTMGVAPLGAKAAHAIPKAVLSYSFAVFLALTSMRMLID 272


>gi|110835207|ref|YP_694066.1| hypothetical protein ABO_2346 [Alcanivorax borkumensis SK2]
 gi|110648318|emb|CAL17794.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 269

 Score =  181 bits (460), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 99/236 (41%), Gaps = 4/236 (1%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP L   F+ +G  D +   +A+ TSL  I  TS+ +   H + G +   +       +
Sbjct: 32  IVPALIFLFRGLGFPDDLVAKMAVATSLSTIIVTSISAVRAHHKAGFVRWPVAVRLGVGI 91

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF----PDNYVKYIWG 163
            +     + +   +    L + F +F +L+ + ML   R   +       P      + G
Sbjct: 92  VLGAFAGAFIADAMKGELLTRLFGLFAMLIAVQMLLVGRKALDESLPQRVPGTPGLALAG 151

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           ++ G  S   G+GGG  T   + +    + +A A S+     IA    L    +GW    
Sbjct: 152 VLIGTGSSIFGIGGGSLTVPFLSWCRLKMQEAVAISSACGLPIAVAGTLGFAVAGWNEQH 211

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           LP  +LG+V + A + I+  S     L+ +LS+ +    L   F++++F      A
Sbjct: 212 LPEGALGYVFLPASVGIVLTSFPFARLSARLSHRLPSATLKKVFALVLFVLGLKLA 267


>gi|332560359|ref|ZP_08414681.1| hypothetical protein RSWS8N_14900 [Rhodobacter sphaeroides WS8N]
 gi|332278071|gb|EGJ23386.1| hypothetical protein RSWS8N_14900 [Rhodobacter sphaeroides WS8N]
          Length = 272

 Score =  181 bits (460), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 74/252 (29%), Positives = 123/252 (48%), Gaps = 3/252 (1%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
                +G ++GL GVGGGLV+VP    AF+ MG      M V + TSL  I  TS+ S  
Sbjct: 16  AIGAFAGIIAGLLGVGGGLVLVPAYLYAFEAMGYGGPSLMRVCLATSLATIIVTSLRSVH 75

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDR 146
            H R G ++++IL+ W   + +  V  + + S +    L   F    + +G+ M   +  
Sbjct: 76  AHHRKGAVDLEILRRWGLWIALGAVAGTFLASSMKSVVLQGIFGGVGVAVGLYMAFGKTS 135

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
                  P    +   G   G LS  +G+GGG F   LM  +   I++A AT+AG   +I
Sbjct: 136 WRLGESLPQGAARAATGTGVGLLSVLMGIGGGTFGVPLMSLFNVPIHRAVATAAGFGVII 195

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           A P+  + +++    +  PP ++G VN+ A  I + +++L TPL  KL++ +  K L   
Sbjct: 196 ALPSAALFLFT--PTDAAPPLTVGAVNLPAFGITIAMTLLTTPLGVKLAHAMDPKPLKRV 253

Query: 267 FSMIMFTTSFVF 278
           F++ +   +   
Sbjct: 254 FAVFIMIVALNM 265



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 18/128 (14%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
                  G LS L G+GGG   VP++S          ++ +H A+ T+ G     ++ S 
Sbjct: 149 AATGTGVGLLSVLMGIGGGTFGVPLMSLF--------NVPIHRAVATAAGFGVIIALPSA 200

Query: 87  MEHRRH----------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                           G +N+      I +  +TT +   +   +D   L + FA+F ++
Sbjct: 201 ALFLFTPTDAAPPLTVGAVNLPAFGITIAMTLLTTPLGVKLAHAMDPKPLKRVFAVFIMI 260

Query: 137 MGILMLKR 144
           + + ML++
Sbjct: 261 VALNMLRK 268


>gi|77462474|ref|YP_351978.1| hypothetical protein RSP_1927 [Rhodobacter sphaeroides 2.4.1]
 gi|77386892|gb|ABA78077.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
          Length = 272

 Score =  181 bits (460), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 74/252 (29%), Positives = 123/252 (48%), Gaps = 3/252 (1%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
                +G ++GL GVGGGLV+VP    AF+ MG      M V + TSL  I  TS+ S  
Sbjct: 16  AIGAFAGIIAGLLGVGGGLVLVPAYLYAFEAMGYGGPSLMRVCLATSLATIIVTSLRSVH 75

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDR 146
            H R G ++++IL+ W   + +  V  + + S +    L   F    + +G+ M   +  
Sbjct: 76  AHHRKGAVDLEILRRWGLWIALGAVAGTFLASSMKSVVLQGIFGGVGVAVGLYMAFGKTS 135

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
                  P    +   G   G LS  +G+GGG F   LM  +   I++A AT+AG   +I
Sbjct: 136 WRLGESLPQGAARAATGTGVGLLSVLMGIGGGTFGVPLMSLFNVPIHRAVATAAGFGVII 195

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           A P+  + +++    +  PP ++G VN+ A  I + +++L TPL  KL++ +  K L   
Sbjct: 196 ALPSAALFLFT--PTDAAPPLTVGAVNLPAFGITIAMTLLTTPLGVKLAHAMDPKPLKRV 253

Query: 267 FSMIMFTTSFVF 278
           F++ +   +   
Sbjct: 254 FAVFIMIVALNM 265



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 18/128 (14%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
                  G LS L G+GGG   VP++S          ++ +H A+ T+ G     ++ S 
Sbjct: 149 AATGTGVGLLSVLMGIGGGTFGVPLMSLF--------NVPIHRAVATAAGFGVIIALPSA 200

Query: 87  MEHRRH----------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                           G +N+      I +  +TT +   +   +D   L + FA+F ++
Sbjct: 201 ALFLFTPTDAAPPLTVGAVNLPAFGITIAMTLLTTPLGVKLAHAMDPKPLKRVFAVFIMI 260

Query: 137 MGILMLKR 144
           + + ML++
Sbjct: 261 VALNMLRK 268


>gi|146276374|ref|YP_001166533.1| hypothetical protein Rsph17025_0322 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145554615|gb|ABP69228.1| protein of unknown function DUF81 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 272

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 73/250 (29%), Positives = 124/250 (49%), Gaps = 3/250 (1%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
              +G ++GL GVGGGL++VP    AF+ +G      M V + TSL  I  TS+ S   H
Sbjct: 18  GAFAGIIAGLLGVGGGLILVPAYLYAFEALGHGGPALMRVCLATSLATIIVTSLRSVHAH 77

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLY 148
              G +++ IL+ W   + +  V  +L  S +    L   F    + +G+ M   +    
Sbjct: 78  HGKGAVDLGILRQWGPWIALGAVAGTLAASGLRSGVLQAIFGTVGVAVGLYMAFGKASWR 137

Query: 149 CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
              + P    +   G+  GFLS  +G+GGG F   LM  +   I++A AT+AG   +IA 
Sbjct: 138 LGERMPRGAARGATGIGMGFLSVLMGIGGGTFGVPLMSLFNVPIHRAVATAAGFGVIIAL 197

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
           P+ L+ + +    +  PPW++G VN+ A  I + +++L  PL  +L++ +  K L   F+
Sbjct: 198 PSALLFLLT--PTDAAPPWTVGSVNLPAFGITIAMTLLTAPLGVRLAHAMDPKPLKRVFA 255

Query: 269 MIMFTTSFVF 278
           + +   +   
Sbjct: 256 VFIMIVALNM 265



 Score = 43.9 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 18/127 (14%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
                 G LS L G+GGG   VP++S          ++ +H A+ T+ G     ++ S +
Sbjct: 150 ATGIGMGFLSVLMGIGGGTFGVPLMSLF--------NVPIHRAVATAAGFGVIIALPSAL 201

Query: 88  EH----------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G++N+      I +  +T  +   +   +D   L + FA+F +++
Sbjct: 202 LFLLTPTDAAPPWTVGSVNLPAFGITIAMTLLTAPLGVRLAHAMDPKPLKRVFAVFIMIV 261

Query: 138 GILMLKR 144
            + ML++
Sbjct: 262 ALNMLRK 268


>gi|145632280|ref|ZP_01788015.1| predicted permease [Haemophilus influenzae 3655]
 gi|145634070|ref|ZP_01789781.1| predicted permease [Haemophilus influenzae PittAA]
 gi|229844042|ref|ZP_04464183.1| predicted permease [Haemophilus influenzae 6P18H1]
 gi|144987187|gb|EDJ93717.1| predicted permease [Haemophilus influenzae 3655]
 gi|145268514|gb|EDK08507.1| predicted permease [Haemophilus influenzae PittAA]
 gi|229813036|gb|EEP48724.1| predicted permease [Haemophilus influenzae 6P18H1]
          Length = 264

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 1/261 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +  +I L ++   L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I
Sbjct: 1   MFTFILLCLLVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T + S   H + G I  + ++    V+ ++  +  L I  +D+    K FA   + + 
Sbjct: 61  VITGIGSAQRHHKLGNIVWQAVRILAPVIMLSVFICGLFIGRLDREISAKIFACLVVYLA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMV-TGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             M+   +       P   +  + G +  G  S A G+GGG F    +   G +I +A  
Sbjct: 121 TKMVLSIKKDQVTTKPLTPLSSVIGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGVSGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATSK 240

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +    L  GF++ +   +   
Sbjct: 241 LPVSTLKKGFALFLIVVAINM 261


>gi|260778404|ref|ZP_05887296.1| hypothetical protein VIC_003805 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260604568|gb|EEX30863.1| hypothetical protein VIC_003805 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 269

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 3/235 (1%)

Query: 47  VMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           V+VP+LS      G+      +  A+ TSL  I  TS  S + H ++G +   +    + 
Sbjct: 32  VIVPILSIILLHFGVLPSEQVVIAAIATSLASILFTSTSSAIAHHKNGNVPWNLAPWIMT 91

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE--RKFPDNYVKYIWG 163
            + +  +++  M + + +  +   FA+  +L+ + M+   +   E  RK P      +  
Sbjct: 92  GVALGALISGFMAALLPEQVVRAVFAVSVILIALKMIFSSKNDSENDRKMPSKPFLTVLT 151

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            +TG LS  +G+GGG     L+ F+   + KA   ++    +IA    +  I SG G   
Sbjct: 152 TITGGLSAMIGIGGGALLVPLLTFFSVDMKKAIGCASACGIVIALFGSIGYISSGSGHYA 211

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L     GFV + A+L I+  S    PL  K ++ +    +   F+ ++   +   
Sbjct: 212 LSDGFAGFVYLPALLGIVSTSWFTAPLGAKATHSLPVPTIKKIFAALLLVMAANM 266



 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 54/124 (43%), Gaps = 4/124 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAP 80
            + V + ++G LS + G+GGG ++VP+L+       + +G   +  + +A+  S+G I+ 
Sbjct: 146 FLTVLTTITGGLSAMIGIGGGALLVPLLTFFSVDMKKAIGCASACGIVIALFGSIGYISS 205

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S    +     G + +  L   +     T  + +     +    + K FA   L+M   
Sbjct: 206 GSGHYALSDGFAGFVYLPALLGIVSTSWFTAPLGAKATHSLPVPTIKKIFAALLLVMAAN 265

Query: 141 MLKR 144
           M+  
Sbjct: 266 MVIN 269


>gi|145636967|ref|ZP_01792631.1| prolipoprotein diacylglyceryl transferase [Haemophilus influenzae
           PittHH]
 gi|145269825|gb|EDK09764.1| prolipoprotein diacylglyceryl transferase [Haemophilus influenzae
           PittHH]
          Length = 264

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 121/261 (46%), Gaps = 1/261 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +  +I L +    L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I
Sbjct: 1   MFTFILLCLFVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T + S   H + G I  + ++    V+ ++  +  L I  +D+    K FA   + + 
Sbjct: 61  VITGIGSAQRHHKLGNIVWQAVRILAPVIMLSVFICGLFIGRLDREISAKIFACLVVYLA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMV-TGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             M+   +       P   +  + G +  G  S A G+GGG F    +   G +I +A  
Sbjct: 121 TKMVLSIKKDQVTTKPLTPLSSVIGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATSK 240

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +    L  GF++ +   +   
Sbjct: 241 LPVSTLKKGFALFLIVVAINM 261


>gi|148826453|ref|YP_001291206.1| hypothetical protein CGSHiEE_07500 [Haemophilus influenzae PittEE]
 gi|229845954|ref|ZP_04466066.1| thymidylate synthase [Haemophilus influenzae 7P49H1]
 gi|148716613|gb|ABQ98823.1| thymidylate synthase [Haemophilus influenzae PittEE]
 gi|229810958|gb|EEP46675.1| thymidylate synthase [Haemophilus influenzae 7P49H1]
 gi|309973600|gb|ADO96801.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
          Length = 264

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 123/261 (47%), Gaps = 1/261 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +  +I L ++   L+G L+GLFG+GGGLV+VP+L     ++ + +S+ M  A+GTS   I
Sbjct: 1   MFTFILLCLLVGALAGFLAGLFGIGGGLVIVPMLVYLLPIVDVPESLLMSTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T + S   H + G I  + ++    V+ ++  +  L I  +D+    K FA   + + 
Sbjct: 61  VITGIGSAQRHHKLGNIVWQAVRILAPVIMLSVFICGLFIGRLDREISAKIFACLVVYLA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMV-TGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             M+   +       P   +  + G +  G  S A G+GGG F    +   G +I +A  
Sbjct: 121 TKMVLSIKKDQVTTKPLTPLSSVIGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATSK 240

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +    L  GF++ +   +   
Sbjct: 241 LPVSTLKKGFALFLIVVAINM 261


>gi|145628168|ref|ZP_01783969.1| thymidylate synthase [Haemophilus influenzae 22.1-21]
 gi|319897610|ref|YP_004135807.1| hypothetical protein HIBPF14100 [Haemophilus influenzae F3031]
 gi|144979943|gb|EDJ89602.1| thymidylate synthase [Haemophilus influenzae 22.1-21]
 gi|317433116|emb|CBY81490.1| conserved hypothetical protein [Haemophilus influenzae F3031]
          Length = 264

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 1/261 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +  +I L ++   L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I
Sbjct: 1   MFTFILLCLLVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T + S   H + G I  + ++    V+ ++  +  L I  +D+    K FA   + + 
Sbjct: 61  VITGIGSAQRHHKLGNIVWQAVRILAPVIMLSVFICGLFIGRLDREISAKIFACLVVYLA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMV-TGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             M+   +       P   +  + G +  G  S A G+GGG F    +   G +I +A  
Sbjct: 121 TKMVLSIKKDQVTTKPLTPLSSVIGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATAK 240

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +    L  GF++ +   +   
Sbjct: 241 LPVSTLKKGFALFLIVVAINM 261


>gi|86145862|ref|ZP_01064190.1| putative membrane protein [Vibrio sp. MED222]
 gi|85836317|gb|EAQ54447.1| putative membrane protein [Vibrio sp. MED222]
          Length = 269

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 3/252 (1%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIAPTSVMSFME 88
               G L+GL G+GGGL++VPVLS     + +      +  A+ TSL  I  TS  S + 
Sbjct: 15  GSGVGFLAGLLGIGGGLIIVPVLSSILLHLEVLPADQVVVAAIATSLASILFTSTSSALA 74

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
           H ++G +   +    +  + +  +++  M + + +  +   FA+  +L+ I M    +  
Sbjct: 75  HHKNGNVPWDLAPWIMLGVALGALISGFMAALLPEKVVRIVFAVSVVLIAIKMFLSSKND 134

Query: 149 C--ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
              ERK P+  V  +   +TG LS  +G+GGG     L+ F+   + KA   ++    +I
Sbjct: 135 APKERKLPNKGVLTVLTTITGGLSAMIGIGGGALLVPLLTFFSVDMKKAIGCASACGIVI 194

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           A    +  I SG     L     GFV + A+L I+  S    PL  K +  +    +   
Sbjct: 195 ALFGSIGYITSGSSHFALTEGFAGFVYLPALLGIVCTSWFTAPLGAKATNHLPVPTIKKI 254

Query: 267 FSMIMFTTSFVF 278
           FS+++   +   
Sbjct: 255 FSVLLVVIAASM 266



 Score = 40.4 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 58/132 (43%), Gaps = 20/132 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ V + ++G LS + G+GGG ++VP+L+          S+ M  A+G +       ++ 
Sbjct: 146 VLTVLTTITGGLSAMIGIGGGALLVPLLTFF--------SVDMKKAIGCASACGIVIALF 197

Query: 85  SFMEHRRHGTINMKILKDWIFVLPI------------TTVVTSLMISHVDKSFLNKAFAI 132
             + +   G+ +  + + +   + +            T  + +   +H+    + K F++
Sbjct: 198 GSIGYITSGSSHFALTEGFAGFVYLPALLGIVCTSWFTAPLGAKATNHLPVPTIKKIFSV 257

Query: 133 FCLLMGILMLKR 144
             +++   M+ R
Sbjct: 258 LLVVIAASMVAR 269


>gi|68249489|ref|YP_248601.1| permease [Haemophilus influenzae 86-028NP]
 gi|68057688|gb|AAX87941.1| predicted permease [Haemophilus influenzae 86-028NP]
          Length = 264

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 1/261 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +  +I L ++   L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I
Sbjct: 1   MFTFILLCLLVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T + S   H + G I  + ++    V+ ++  +  L I  +D+    K FA   + + 
Sbjct: 61  VITGIGSAQRHHKLGNIVWQAVRILAPVIMLSVFICGLFIGRLDREISAKIFACLVVYLA 120

Query: 139 ILMLKR-DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             M+    +     K        I G++ G  S A G+GGG F    +   G +I +A  
Sbjct: 121 TKMVLSIKKDQVTTKPLTPLASVIGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGVSGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATAK 240

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +    L  GF++ +   +   
Sbjct: 241 LPVSTLKKGFALFLIVVAINM 261


>gi|330506349|ref|YP_004382777.1| hypothetical protein MCON_0034 [Methanosaeta concilii GP-6]
 gi|328927157|gb|AEB66959.1| integral membrane protein of unknown function (DUF81) [Methanosaeta
           concilii GP-6]
          Length = 281

 Score =  179 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 69/272 (25%), Positives = 122/272 (44%), Gaps = 3/272 (1%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + V +  + ++ YI ++++   + G   G+ GVGGG +MVPV   A   MG+D ++   V
Sbjct: 1   MQVAMIAESMLIYIIVLLLTGMVVGFACGMLGVGGGFIMVPVQIWALTSMGVDPTLSTRV 60

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A GTSL VI PTS+     H   G +  +          +   +   + SH     L   
Sbjct: 61  AFGTSLAVILPTSLCGCHGHNCQGVVLWRPGVTLGLSGLVGAFLGGTIASHAPGELLRMI 120

Query: 130 FAIFCLLMGILMLKRDRLYCERK--FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-L 186
           F I  +   + M+    L   R           +WG+V G +SG  G+GGG+     M +
Sbjct: 121 FGIIIIGGALRMIYARDLRRGRPEVVSSLLPYILWGVVVGVISGLAGIGGGVILVPAMVI 180

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
             G ++Y+A  TS    A  A    +    +GWG+ GLP + +G++++   +++   S+L
Sbjct: 181 AMGFTMYQAVGTSTVAIAFNAVGGTIAYAINGWGVAGLPAYCVGYIDLFQFVLLAGASML 240

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                  +++ + ++ L   F  +M       
Sbjct: 241 TAHWGVNVTHKMSEEKLKRIFIALMILIGLKM 272



 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 19/140 (13%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
            +  VV  +   I+   + G +SGL G+GGG+++VP +        I     M+ A+GTS
Sbjct: 141 GRPEVVSSLLPYILWGVVVGVISGLAGIGGGVILVPAMV-------IAMGFTMYQAVGTS 193

Query: 75  LGVIAPTSVMSFMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
              IA  +V   + +               G I++           +T      +   + 
Sbjct: 194 TVAIAFNAVGGTIAYAINGWGVAGLPAYCVGYIDLFQFVLLAGASMLTAHWGVNVTHKMS 253

Query: 123 KSFLNKAFAIFCLLMGILML 142
           +  L + F    +L+G+ M+
Sbjct: 254 EEKLKRIFIALMILIGLKMM 273


>gi|319775165|ref|YP_004137653.1| hypothetical protein HICON_05000 [Haemophilus influenzae F3047]
 gi|317449756|emb|CBY85963.1| conserved hypothetical protein [Haemophilus influenzae F3047]
          Length = 264

 Score =  179 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 1/261 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +  +I L ++   L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I
Sbjct: 1   MFTFILLCLLVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T + S   H + G I  + ++    V+  +  +  L I  +D+    K FA   + + 
Sbjct: 61  VITGIGSAQRHHKLGNIVWQAVRILAPVIMFSVFICGLFIGRLDREISAKIFACLVVYLA 120

Query: 139 ILMLKR-DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             M+    +     K        I G++ G  S A G+GGG F    +   G +I +A  
Sbjct: 121 TKMVLSIKKDQVTTKPLTPLASVIGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATAK 240

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +    L  GF++ +   +   
Sbjct: 241 LPVSTLKKGFALFLIVVAINM 261


>gi|332289793|ref|YP_004420645.1| Sulfite exporter TauE/SafE [Gallibacterium anatis UMN179]
 gi|330432689|gb|AEC17748.1| Sulfite exporter TauE/SafE [Gallibacterium anatis UMN179]
          Length = 262

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 73/258 (28%), Positives = 123/258 (47%), Gaps = 1/258 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++ +  + +V   L G L+GLFG+GGG+++VPVL     + GI D++ M  A+GTS   I
Sbjct: 1   MLTFFLICLVVGALVGFLAGLFGIGGGVIIVPVLVYLLPMAGIPDNLLMSSALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T   S   H + G I    +K    V+ +TT ++ L I  +DK+  +K FA   + + 
Sbjct: 61  VVTGFSSAQRHHKLGNIVWDAVKILAPVIMVTTFISGLFIGKLDKAIASKIFACLVVYLA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           + M+   +     K        + G++ G  S A G+GGG F    +   G  + KA  +
Sbjct: 121 LKMVLSIKPKQAVKTLTKTASVVGGILIGIASSAAGIGGGGFIVPFLNSRGIDMKKAIGS 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           SA    L+    +L  I  GW    +P +SLG+V + AV+ I   S   + L    +  +
Sbjct: 181 SAFCGMLLGLSGMLSFIIGGWN-ADMPDYSLGYVYLPAVVGITVTSFFTSKLGATTTTKL 239

Query: 259 GKKYLTIGFSMIMFTTSF 276
               L   F++++   + 
Sbjct: 240 PIPTLKRYFALMLIAIAI 257



 Score = 36.2 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 46/122 (37%), Gaps = 4/122 (3%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
            +  + G + GFL+G  G+GGG+    ++++    +         +    A       I 
Sbjct: 6   LICLVVGALVGFLAGLFGIGGGVIIVPVLVYL-LPMA---GIPDNLLMSSALGTSFATIV 61

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                +      LG +   AV I+ P+ ++ T ++      + K   +  F+ ++   + 
Sbjct: 62  VTGFSSAQRHHKLGNIVWDAVKILAPVIMVTTFISGLFIGKLDKAIASKIFACLVVYLAL 121

Query: 277 VF 278
             
Sbjct: 122 KM 123


>gi|158336922|ref|YP_001518097.1| hypothetical protein AM1_3794 [Acaryochloris marina MBIC11017]
 gi|158307163|gb|ABW28780.1| conserved hypothetical membrane protein [Acaryochloris marina
           MBIC11017]
          Length = 278

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 5/237 (2%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP L   F L+ +     MH+A G+S+ ++  T+  S   H R   I   I +  I 
Sbjct: 29  MLIVPGLFYLFDLIQLPQESLMHMAAGSSMCIMICTAASSTWAHHRQEHIQWSIFRTIIA 88

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF----PDNYVKYI 161
            + +  V  +L+ + +    L   F IF L++   +    +     +     P       
Sbjct: 89  GIAVGVVSGNLLANRMPTQLLELIFGIFLLVVSTKIFFEKKSEDAEEQTVGAPGIVPTSA 148

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
            GMV GF SG LG+GGG  +   +L+ G  + KA+ TSA  +  IA    L  +      
Sbjct: 149 VGMVIGFKSGVLGIGGGALSVPFLLYCGLPMKKASGTSASFTLPIAIVGTLSFLLLSGNQ 208

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             +P WS G+V   AVL++ P ++L  P+  K + ++  + L   F+ ++   S   
Sbjct: 209 TAIP-WSTGYVYWPAVLLVAPFTMLGAPIGAKFAGIVAPEKLRTIFAGLLLVISMRM 264



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 41/126 (32%), Gaps = 19/126 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
               + G  SG+ G+GGG + VP L            + M  A GTS     P +++  +
Sbjct: 148 AVGMVIGFKSGVLGIGGGALSVPFLLYC--------GLPMKKASGTSASFTLPIAIVGTL 199

Query: 88  EH-----------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                           G +    +        +   + +     V    L   FA   L+
Sbjct: 200 SFLLLSGNQTAIPWSTGYVYWPAVLLVAPFTMLGAPIGAKFAGIVAPEKLRTIFAGLLLV 259

Query: 137 MGILML 142
           + + ML
Sbjct: 260 ISMRML 265


>gi|16272840|ref|NP_439063.1| hypothetical protein HI0902 [Haemophilus influenzae Rd KW20]
 gi|148828082|ref|YP_001292835.1| hypothetical protein CGSHiGG_08070 [Haemophilus influenzae PittGG]
 gi|260579993|ref|ZP_05847823.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|1175325|sp|P44070|Y902_HAEIN RecName: Full=UPF0721 transmembrane protein HI_0902
 gi|1573922|gb|AAC22562.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|148719324|gb|ABR00452.1| hypothetical protein CGSHiGG_08070 [Haemophilus influenzae PittGG]
 gi|260093277|gb|EEW77210.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
          Length = 264

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 1/261 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +  +I L ++   L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I
Sbjct: 1   MFTFILLCLLVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T + S   H + G I  + ++    V+ ++  +  L I  +D+    K FA   + + 
Sbjct: 61  VITGIGSAQRHHKLGNIVWQAVRILAPVIMLSVFICGLFIGRLDREISAKIFACLVVYLA 120

Query: 139 ILMLKR-DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             M+    +     K        I G++ G  S A G+GGG F    +   G +I +A  
Sbjct: 121 TKMVLSIKKDQVTTKSLTPLSSVIGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATAK 240

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +    L  GF++ +   +   
Sbjct: 241 LPVSTLKKGFALFLIVVAINM 261


>gi|260581730|ref|ZP_05849527.1| thymidylate synthase [Haemophilus influenzae NT127]
 gi|260095323|gb|EEW79214.1| thymidylate synthase [Haemophilus influenzae NT127]
          Length = 264

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 1/261 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +  ++ L ++   L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I
Sbjct: 1   MFTFMLLCLLVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T + S   H + G I  + ++    V+ ++  +  L I  +D+    K FA   + + 
Sbjct: 61  VITGIGSAQRHHKLGNIVWQAVRILAPVIMLSVFICGLFIGRLDREISAKIFACLVVYLA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMV-TGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             M+   +       P   +  + G +  G  S A G+GGG F    +   G +I +A  
Sbjct: 121 TKMVLSIKKDQVTTKPLTPLSSVIGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATAK 240

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +    L  GF++ +   +   
Sbjct: 241 LPVSTLKKGFALFLIVVAINM 261


>gi|145638276|ref|ZP_01793886.1| thymidylate synthase [Haemophilus influenzae PittII]
 gi|145272605|gb|EDK12512.1| thymidylate synthase [Haemophilus influenzae PittII]
 gi|309751430|gb|ADO81414.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
          Length = 264

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 1/261 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +  +I L ++   L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I
Sbjct: 1   MFTFILLCLLVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T + S   H + G I  + ++    V+  +  +  L I  +D+    K FA   + + 
Sbjct: 61  VITGIGSAQRHHKLGNIVWQAVRILAPVIMFSVFICGLFIGRLDREISAKIFACLVVYLA 120

Query: 139 ILMLKR-DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             M+    +     K        I G++ G  S A G+GGG F    +   G +I +A  
Sbjct: 121 TKMVLSIKKDQVTTKSLTPLSSVIGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATAK 240

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +    L  GF++ +   +   
Sbjct: 241 LPVSTLKKGFALFLIVVAINM 261


>gi|152978405|ref|YP_001344034.1| hypothetical protein Asuc_0727 [Actinobacillus succinogenes 130Z]
 gi|150840128|gb|ABR74099.1| protein of unknown function DUF81 [Actinobacillus succinogenes
           130Z]
          Length = 263

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 119/260 (45%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++    + ++   L G L+GLFG+GGGL++VPVL     L G+ DS+ M  A+GTS   I
Sbjct: 1   MITLFLMCLLVGCLVGFLAGLFGIGGGLIIVPVLVYLLPLAGVPDSLLMTTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T   S   H R G I    LK +   + I T + SL +S++ +   +K FA   + + 
Sbjct: 61  IVTGASSAYNHYRMGNIRWSSLKVFAPTIMIATYLASLFVSNLPRELASKIFAALVVYLA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             M+   +     K        I G V G LS   G+GGG F    +   G  + +A  +
Sbjct: 121 TKMILSVKSKMGDKPLTAQAAIIGGSVIGILSSGAGIGGGGFIVPFLNSRGYEMRQAIGS 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+    L+A    L  I SGW    +P WSLG+V + A+L I+  S+  T      +  +
Sbjct: 181 SSFCGMLLALSGTLSYITSGWNNVNMPDWSLGYVYLPAMLGIVATSMFTTKFGVITATNL 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F+  +   +   
Sbjct: 241 PVAKLKRYFAGFLLLIAVKM 260



 Score = 35.8 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 20/128 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+   + G LS   G+GGG  +VP L+             M  A+G+S       ++   
Sbjct: 142 IIGGSVIGILSSGAGIGGGGFIVPFLN--------SRGYEMRQAIGSSSFCGMLLALSGT 193

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           + +               G + +  +   +     TT    +  +++  + L + FA F 
Sbjct: 194 LSYITSGWNNVNMPDWSLGYVYLPAMLGIVATSMFTTKFGVITATNLPVAKLKRYFAGFL 253

Query: 135 LLMGILML 142
           LL+ + M 
Sbjct: 254 LLIAVKMF 261


>gi|289207575|ref|YP_003459641.1| hypothetical protein TK90_0390 [Thioalkalivibrio sp. K90mix]
 gi|288943206|gb|ADC70905.1| protein of unknown function DUF81 [Thioalkalivibrio sp. K90mix]
          Length = 268

 Score =  178 bits (453), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 64/248 (25%), Positives = 122/248 (49%), Gaps = 3/248 (1%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  +G+FG+GGGL++VPV    F L+  D +  + +A+G+SLG I PT+++S   H R 
Sbjct: 19  AGIPAGMFGIGGGLILVPVFVAIFSLLAFDAASLVQLAVGSSLGAIIPTAILSARAHHRR 78

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           G ++   ++  +  +    ++ + + + +D   L + F  F + +GI ML   +   +  
Sbjct: 79  GGVDGTAVRRLLPGIIFGALLGAWLATRIDSDHLGRIFGAFEVAIGIWMLLNVQP-PKAP 137

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            P   V    G V G +S  +G+GGG  T   ++  G  + +A  ++A +   IA  A L
Sbjct: 138 VPRRSVWLGGGTVIGAVSSLIGIGGGTLTTPFLVSQGLELRRAIGSAAALGVPIAIGASL 197

Query: 213 VRIYSGWGLNG--LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           V     W       P W+LG++ + A+L ++  + +       L++ +    L  GF+ +
Sbjct: 198 VFALPQWTDPAYQAPEWALGYLYLPAILGVVIGTAISVRAGVWLTHHLPVGVLRRGFAGV 257

Query: 271 MFTTSFVF 278
           +     + 
Sbjct: 258 LILAGILM 265



 Score = 43.1 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 6/124 (4%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAP-- 80
           +    + G +S L G+GGG +  P L        + +G   ++ + +A+G SL    P  
Sbjct: 145 LGGGTVIGAVSSLIGIGGGTLTTPFLVSQGLELRRAIGSAAALGVPIAIGASLVFALPQW 204

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T           G + +  +   +    I+      +  H+    L + FA   +L GIL
Sbjct: 205 TDPAYQAPEWALGYLYLPAILGVVIGTAISVRAGVWLTHHLPVGVLRRGFAGVLILAGIL 264

Query: 141 MLKR 144
           ML R
Sbjct: 265 MLIR 268


>gi|212633077|ref|YP_002309602.1| hypothetical protein swp_0172 [Shewanella piezotolerans WP3]
 gi|212554561|gb|ACJ27015.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 269

 Score =  178 bits (453), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 3/235 (1%)

Query: 47  VMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           V+VPVLS       +      M  A+ TSL  I  TS  S + H ++G +   +    + 
Sbjct: 32  VIVPVLSSILLHFEVLPAEQVMIAAIATSLASILFTSTSSAIAHHKNGNVPWNLTPWVMV 91

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC--ERKFPDNYVKYIWG 163
            + +  +++  M S + +  +   FA+  +L+   ML  ++ +   ERK P   +  +  
Sbjct: 92  GVALGALISGFMASLLPEKIVRIVFAVSVVLIAFKMLYSNKSHSSTERKMPHKGLLTVLT 151

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            +TG LS  +G+GGG     L+ F+   + KA   ++    +IA    +  I +G  L  
Sbjct: 152 TITGSLSAMIGIGGGALLVPLLTFFSLDMKKAIGCASACGIVIALFGSIGYISAGSHLFA 211

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L     GFV + A+  I+  S    PL  K ++ +    +   F++++   +   
Sbjct: 212 LADGFAGFVYLPALFGIVCTSWFTAPLGAKSTHYLPVSVIKKIFAVLLLAVAANM 266



 Score = 43.1 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 60/124 (48%), Gaps = 4/124 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAP 80
           L+ V + ++G+LS + G+GGG ++VP+L+       + +G   +  + +A+  S+G I+ 
Sbjct: 146 LLTVLTTITGSLSAMIGIGGGALLVPLLTFFSLDMKKAIGCASACGIVIALFGSIGYISA 205

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S +  +     G + +  L   +     T  + +    ++  S + K FA+  L +   
Sbjct: 206 GSHLFALADGFAGFVYLPALFGIVCTSWFTAPLGAKSTHYLPVSVIKKIFAVLLLAVAAN 265

Query: 141 MLKR 144
           M+ +
Sbjct: 266 MILQ 269


>gi|329122917|ref|ZP_08251488.1| permease [Haemophilus aegyptius ATCC 11116]
 gi|327471848|gb|EGF17288.1| permease [Haemophilus aegyptius ATCC 11116]
          Length = 264

 Score =  178 bits (453), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 1/261 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +  +I L ++   L+G L+GLFG+GGGLV+VP L     ++ + +S+ M  A+GTS   I
Sbjct: 1   MFTFILLCLLVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T + S   H + G I  + ++    V+ ++  +  L I  +D+    K FA   + + 
Sbjct: 61  VITGIGSAQRHHKLGNIVWQAVRILAPVIMLSVFICGLFIGRLDREISAKIFACLVVYLA 120

Query: 139 ILMLKR-DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             M+    +     K        I G++ G  S A G+GGG F    +   G +I +A  
Sbjct: 121 TKMVLSIKKDQVTTKSLTPLSSVIGGILIGMASSAAGIGGGGFIVPFLTARGINIKQAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+    +   I SGWG   +P +SLG++ + AVL I   S   + L    +  
Sbjct: 181 SSAFCGMLLGISGMFSFIVSGWGNPLIPEYSLGYIYLPAVLGITATSFFTSKLGASATAK 240

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +    L  GF++ +   +   
Sbjct: 241 LPVSTLKKGFALFLIVVAINM 261


>gi|259416485|ref|ZP_05740405.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
 gi|259347924|gb|EEW59701.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
          Length = 278

 Score =  178 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 70/230 (30%), Positives = 117/230 (50%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L  A  L G+D ++ M VA+GTSL  I  T++ S   H + G I+M +LK W   +  
Sbjct: 38  PALYFALGLTGMDPALTMQVAVGTSLATIVFTALSSGYGHYKKGAIDMALLKLWAPSILG 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V+  ++   V  + L   FA   + + + L+L++ +   E +     V    G+  G 
Sbjct: 98  GVVIGGVLGGLVSGNVLLIVFATIAMAVALDLILRKPKESPEPRSFSKPVWAALGVFAGA 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+GGG      + F G  I KA  TSA +  +I  P  ++ + +G+G  GLPP S
Sbjct: 158 VSAMMGIGGGSVCVPTLSFLGYDIRKAVGTSAAIGFIIGLPGAIIYMATGFGAEGLPPLS 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           LG+VN+    +I+P+S     +  KL++ I ++ L + F + +  TS   
Sbjct: 218 LGYVNLLLAAVIIPLSTTFARVGVKLAHSIPRRALKLSFGLFLMATSIRM 267



 Score = 43.1 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 20/128 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
                 +G +S + G+GGG V VP LS             +  A+GTS  +     +   
Sbjct: 149 AALGVFAGAVSAMMGIGGGSVCVPTLSFL--------GYDIRKAVGTSAAIGFIIGLPGA 200

Query: 87  MEHRR------------HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           + +               G +N+ +    I +      V   +   + +  L  +F +F 
Sbjct: 201 IIYMATGFGAEGLPPLSLGYVNLLLAAVIIPLSTTFARVGVKLAHSIPRRALKLSFGLFL 260

Query: 135 LLMGILML 142
           +   I M 
Sbjct: 261 MATSIRMF 268


>gi|114331943|ref|YP_748165.1| hypothetical protein Neut_1971 [Nitrosomonas eutropha C91]
 gi|114308957|gb|ABI60200.1| protein of unknown function DUF81 [Nitrosomonas eutropha C91]
          Length = 266

 Score =  178 bits (452), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 1/223 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           VMVPVL+  F  +G  D   +H+A+GT+  +I  TS+ S   H  HG +N  ++      
Sbjct: 28  VMVPVLASIFISLGFPDDRVLHMALGTTTAIITLTSISSLRAHHAHGAVNWWVVCYISPG 87

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           +    +  S + SH+    L+    +F       M    +       P     +  G V 
Sbjct: 88  IVAGALAGSTLASHLSSQILSIILVLFISFAATRMWFNLKPGKNYTLPGKIGMFAAGGVI 147

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN-GLP 225
           G +SG + +GGG+ T   ++     ++ A  T+A V   +A  +      +G   N  LP
Sbjct: 148 GAISGLVSIGGGMLTVPFLVACQIRLHHAIGTAAAVGFPVALASAAGYAANGLLQNKQLP 207

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            +SLG++ + A++I+   SI+  PL  + +Y++    L   F+
Sbjct: 208 DYSLGYIYLPALIIVALTSIVTAPLGARTAYILPAASLRKIFA 250



 Score = 35.8 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 44/119 (36%), Gaps = 21/119 (17%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +  A  + G +SGL  +GGG++ VP L            I +H A+GT+  V  P ++ S
Sbjct: 140 MFAAGGVIGAISGLVSIGGGMLTVPFLVAC--------QIRLHHAIGTAAAVGFPVALAS 191

Query: 86  FME-------------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
                               G I +  L        +T  + +     +  + L K FA
Sbjct: 192 AAGYAANGLLQNKQLPDYSLGYIYLPALIIVALTSIVTAPLGARTAYILPAASLRKIFA 250


>gi|126735874|ref|ZP_01751618.1| hypothetical protein RCCS2_01528 [Roseobacter sp. CCS2]
 gi|126714431|gb|EBA11298.1| hypothetical protein RCCS2_01528 [Roseobacter sp. CCS2]
          Length = 275

 Score =  178 bits (452), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 66/234 (28%), Positives = 115/234 (49%), Gaps = 1/234 (0%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           + +VPVL   F  + + + + MH+A+ TSL  I P SV S   H   G ++  + + W  
Sbjct: 37  MFVVPVLFFLFGALNVPNDVAMHLAVATSLATIIPISVSSARAHYIRGALDTHLFRSWAP 96

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV-KYIWGM 164
            + +   +  L   +VD + L   F    L++ + M            P + + + + G 
Sbjct: 97  FIFVGAALGGLASKYVDGAQLTVIFGAIALIVALTMAAPKGPVIADSVPSSVLPRSLIGS 156

Query: 165 VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
           V G LS  +G+GGG  +  ++  +   + +A  T+A    +IA PA++  ++SG G+   
Sbjct: 157 VIGLLSALMGIGGGTLSVPILTLFSFPVKRAIGTAAAFGIVIAVPAVIGFVWSGLGVADR 216

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           PPWSLG VN+ A +I++  +I   P+  ++S+ I    L   FS  +F TS   
Sbjct: 217 PPWSLGNVNMPAAVIVVVAAIFTAPIGARMSHAIDPTALRFVFSGFLFVTSIYM 270



 Score = 41.2 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 53/142 (37%), Gaps = 20/142 (14%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  D V   +    +   + G LS L G+GGG + VP+L+          S  +  A+GT
Sbjct: 139 VIADSVPSSVLPRSLIGSVIGLLSALMGIGGGTLSVPILTLF--------SFPVKRAIGT 190

Query: 74  SLGVIAPTSVMSFMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHV 121
           +       +V + +                 G +NM      +     T  + + M   +
Sbjct: 191 AAAFGIVIAVPAVIGFVWSGLGVADRPPWSLGNVNMPAAVIVVVAAIFTAPIGARMSHAI 250

Query: 122 DKSFLNKAFAIFCLLMGILMLK 143
           D + L   F+ F  +  I ML+
Sbjct: 251 DPTALRFVFSGFLFVTSIYMLR 272


>gi|99080207|ref|YP_612361.1| hypothetical protein TM1040_0366 [Ruegeria sp. TM1040]
 gi|99036487|gb|ABF63099.1| protein of unknown function DUF81 [Ruegeria sp. TM1040]
          Length = 278

 Score =  178 bits (452), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 71/230 (30%), Positives = 115/230 (50%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L  A  L G+D ++ M VA+GTSL  I  T++ S   H + G I+M +LK W   +  
Sbjct: 38  PALYFALGLTGMDPALTMQVAVGTSLATIVFTALSSGYGHYKKGAIDMALLKLWAPSILG 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V+  ++   V    L   FA   + + + LML++     E +     V    G+  G 
Sbjct: 98  GVVIGGVLGGLVSGIVLLVVFATIAMAVALDLMLRKPNDSPEPRSFSKPVWAALGVFAGS 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+GGG      + F G  I KA  TSA +  +I  P  ++ + +G+G  GLPP S
Sbjct: 158 VSAMMGIGGGTVCVPTLSFLGYDIRKAVGTSAAIGFIIGLPGAVIYMATGFGAEGLPPLS 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           LG+VN+    +I+P+S     +  KL++ I ++ L + F + +  TS   
Sbjct: 218 LGYVNLLLAAVIIPLSTTFARVGVKLAHSIPRRALKLSFGVFLMATSLRM 267



 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
                 +G++S + G+GGG V VP LS             +  A+GTS  +     +   
Sbjct: 149 AALGVFAGSVSAMMGIGGGTVCVPTLSFL--------GYDIRKAVGTSAAIGFIIGLPGA 200

Query: 87  MEHRR------------HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           + +               G +N+ +    I +      V   +   + +  L  +F +F 
Sbjct: 201 VIYMATGFGAEGLPPLSLGYVNLLLAAVIIPLSTTFARVGVKLAHSIPRRALKLSFGVFL 260

Query: 135 LLMGILMLKR 144
           +   + M   
Sbjct: 261 MATSLRMFAD 270


>gi|326793477|ref|YP_004311297.1| hypothetical protein Marme_0157 [Marinomonas mediterranea MMB-1]
 gi|326544241|gb|ADZ89461.1| protein of unknown function DUF81 [Marinomonas mediterranea MMB-1]
          Length = 272

 Score =  177 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 4/231 (1%)

Query: 50  PVLSKAFQLMGIDDSICM--HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           PVL   +Q +G+     M    A  TSL  I PTS+ S   H+  G ++  +LK   F +
Sbjct: 38  PVLFFLYQGLGVSADSAMLV--ATATSLATIIPTSISSIRSHKAKGNVDFDLLKQLGFFV 95

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            I  +V S +++ V+  +L   F +   L  I ML   +       P    + I G   G
Sbjct: 96  FIGVLVGSYVVTQVEGEWLTLLFGVIATLSAINMLVGRKEALFSSLPGKLGRGIIGYCIG 155

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           F S  +G+GGG  T   + F     +KA  T+A V  +I+ PA +  +  G   +  P  
Sbjct: 156 FFSSMVGIGGGTLTVPTLTFCNYPAHKAVGTAAAVGLIISLPAAVTMLIFGQSPSDAPFG 215

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++G VN+     I+P+++L  P+   ++  +    L   F++++  T    
Sbjct: 216 TVGLVNLIGFAFIVPLTVLFAPVGAGIANKLDAAKLKKVFAVVLIITGLRM 266



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 53/129 (41%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +  +  G  S + G+GGG + VP L+          +   H A+GT+  V    S+ + +
Sbjct: 149 IIGYCIGFFSSMVGIGGGTLTVPTLTFC--------NYPAHKAVGTAAAVGLIISLPAAV 200

Query: 88  EHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                G             +N+      + +  +   V + + + +D + L K FA+  +
Sbjct: 201 TMLIFGQSPSDAPFGTVGLVNLIGFAFIVPLTVLFAPVGAGIANKLDAAKLKKVFAVVLI 260

Query: 136 LMGILMLKR 144
           + G+ ML +
Sbjct: 261 ITGLRMLYQ 269


>gi|86135928|ref|ZP_01054507.1| hypothetical protein MED193_17434 [Roseobacter sp. MED193]
 gi|85826802|gb|EAQ46998.1| hypothetical protein MED193_17434 [Roseobacter sp. MED193]
          Length = 274

 Score =  177 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 75/230 (32%), Positives = 118/230 (51%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L  A  L G+D ++ M VA+GTSL  I  TS+ S   H R G I+M +LK W   + I
Sbjct: 38  PALYLALTLTGMDSALTMQVAVGTSLATIVFTSLSSSYGHYRKGAIDMGLLKLWSPSILI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V+ S++   V    L   FA    ++ + M L++       +     V    G+V G 
Sbjct: 98  GVVIGSVLGGLVSGKVLIAVFATVAAIVALDMILRKGGGDSAPRSFAKPVWAALGVVAGA 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+GGG     L+ F G  I KA  TSA +  +I  P  L+ + +G+G +GLPP+S
Sbjct: 158 ISAMMGIGGGTVCVPLLNFLGYDIRKAVGTSAAIGFVIGLPGALIYMGTGFGADGLPPFS 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            G+VN+    +I+P+S     +  KL++ I ++ L + F + +  TS   
Sbjct: 218 FGYVNLFLAAVIIPLSTSFARVGVKLAHSIPRRALRLAFGLFLMFTSLHM 267



 Score = 42.4 bits (99), Expect = 0.071,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 47/130 (36%), Gaps = 20/130 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
                ++G +S + G+GGG V VP+L+             +  A+GTS  +     +   
Sbjct: 149 AALGVVAGAISAMMGIGGGTVCVPLLNFL--------GYDIRKAVGTSAAIGFVIGLPGA 200

Query: 87  MEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           + +               G +N+ +    I +      V   +   + +  L  AF +F 
Sbjct: 201 LIYMGTGFGADGLPPFSFGYVNLFLAAVIIPLSTSFARVGVKLAHSIPRRALRLAFGLFL 260

Query: 135 LLMGILMLKR 144
           +   + M K 
Sbjct: 261 MFTSLHMFKD 270


>gi|71282040|ref|YP_267896.1| hypothetical protein CPS_1153 [Colwellia psychrerythraea 34H]
 gi|71147780|gb|AAZ28253.1| putative membrane protein [Colwellia psychrerythraea 34H]
          Length = 269

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 3/265 (1%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSL 75
           + ++  I    +     G L+GL G+GGGLV+VPVLS       +      + VA+ TSL
Sbjct: 2   NELILLIIYCALLGSGVGFLAGLLGIGGGLVIVPVLSSLLLYFDVLPTEQVVIVAIATSL 61

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
             I  TS  S + H ++G +   +    +  + +  +++  + + + +  +   FA+  +
Sbjct: 62  ASILFTSTSSAIAHHKNGNVPWNLAPWIMTGVALGALISGFIAALLPEQVVRIVFAVTVV 121

Query: 136 LMGILMLKRDR--LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
           L+ + M    +     +R+ P+  +   +  +TG LS  +G+GGG     L+ F+   + 
Sbjct: 122 LIAVKMFYSSKSDAPSKRQLPNKGLLTFFTTITGGLSAMIGIGGGALLVPLLTFFSLDMK 181

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           KA   ++    +IA    +  I SG     L     GFV + A+L I+  S    PL  K
Sbjct: 182 KAIGCASACGIVIALFGSIGYISSGSAYFALADGFAGFVYLPALLGIVCTSWFTAPLGAK 241

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVF 278
            ++ +    +   FS ++   +   
Sbjct: 242 ATHYLPVSTIKRIFSALLLVMAANM 266



 Score = 40.4 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 56/124 (45%), Gaps = 4/124 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAP 80
           L+   + ++G LS + G+GGG ++VP+L+       + +G   +  + +A+  S+G I+ 
Sbjct: 146 LLTFFTTITGGLSAMIGIGGGALLVPLLTFFSLDMKKAIGCASACGIVIALFGSIGYISS 205

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S    +     G + +  L   +     T  + +    ++  S + + F+   L+M   
Sbjct: 206 GSAYFALADGFAGFVYLPALLGIVCTSWFTAPLGAKATHYLPVSTIKRIFSALLLVMAAN 265

Query: 141 MLKR 144
           M+  
Sbjct: 266 MIIN 269


>gi|332526721|ref|ZP_08402823.1| hypothetical protein RBXJA2T_12547 [Rubrivivax benzoatilyticus JA2]
 gi|332111124|gb|EGJ11156.1| hypothetical protein RBXJA2T_12547 [Rubrivivax benzoatilyticus JA2]
          Length = 270

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 1/264 (0%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  V  +  +I     +G ++GL GVGGG+ MVP L+      G++  + + +A+ TS+ 
Sbjct: 2   DFGVLLVAELIALGIATGFVAGLLGVGGGMTMVPFLTAILSHRGVEAGLAVKMAIATSMA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV-TSLMISHVDKSFLNKAFAIFCL 135
            I  TS+ S   H RHG +    ++     + +  +V  + + +      L   FA+F  
Sbjct: 62  TIVFTSLSSMRAHHRHGAVRWDYVRGIAPGIVLGGLVSGAGVFALAKGRGLALFFAVFIG 121

Query: 136 LMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
              + ML+  +    R  P    +   G   G +SG LG GGG  +   M +    + +A
Sbjct: 122 FSALQMLRGKQPRPTRTMPGAAGQAAVGSGIGLVSGLLGAGGGFLSVPFMSWCNVPLRQA 181

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            ATSA +   IA   +   + +G  L    P + G++ + A+ I+   S+ + PL  + +
Sbjct: 182 IATSAALGFPIALANVAGYLIAGRDLPPALPGAFGYLYLPALAIVSVASVTLAPLGARAA 241

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
             + ++ L   F++++F  +   A
Sbjct: 242 QRMDQRRLRRIFALMLFALAAYMA 265


>gi|300023379|ref|YP_003755990.1| hypothetical protein Hden_1866 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299525200|gb|ADJ23669.1| protein of unknown function DUF81 [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 274

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 116/227 (51%), Gaps = 2/227 (0%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
            + +  +G+ + + MHV +GT+L VIAPT + SF   R  GT+++ I++     + +   
Sbjct: 44  YEVYGAIGVPEDVRMHVTLGTTLAVIAPTVLRSFAAFRARGTVDIDIVRRMGPWIFVGVT 103

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSG 171
              L+  H     L   + +F   + I M L RD        P            G +S 
Sbjct: 104 AGILIADHASSVALRWVWVVFGTALAIKMALGRDDWRIANTLPRPPWLEGAAFGIGTIST 163

Query: 172 ALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF 231
            +G+GG  FT  L+  +G  I +A AT+ G+  +IA P L+  + SGWG+ GLPP SLG+
Sbjct: 164 LMGIGGASFTVPLLTLFGRPILQAVATATGLGPIIAIPGLIGYVISGWGVAGLPPLSLGY 223

Query: 232 VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           VN GA+L I P+ +L  P   ++++ I K+ L + F+  +   +  F
Sbjct: 224 VNAGALL-IAPLGVLAAPYGVRMAHSIPKRALELAFATFLACVALRF 269


>gi|126732117|ref|ZP_01747919.1| hypothetical protein SSE37_14744 [Sagittula stellata E-37]
 gi|126707406|gb|EBA06470.1| hypothetical protein SSE37_14744 [Sagittula stellata E-37]
          Length = 272

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/233 (28%), Positives = 110/233 (47%), Gaps = 1/233 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
            +VPVL   F+ +G+ D+I M + +GTS   I  TS+ S   H R G + + IL+ W   
Sbjct: 34  FLVPVLLFIFRGLGVSDTIVMQLCVGTSTATIVATSIRSVWAHHRRGAVEVAILRAWAPW 93

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-KRDRLYCERKFPDNYVKYIWGMV 165
           L    ++  L  + +    L   F     LMGI ML          + P   V   +   
Sbjct: 94  LAAGAILGVLTATSLKSDTLMLIFGGLATLMGIYMLAGNPDWRLGNEHPGPRVYVPYSGT 153

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            GF+   +G+GGG F    +  YG  I +A ATSAG   LI+ PA +  + +      LP
Sbjct: 154 MGFVCAMIGIGGGTFGVPALTAYGTPINRAIATSAGFGLLISLPASVTYLLASPKDLTLP 213

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           P+++G V++ A + I  ++ L  P+  +L++++    L   F++ +   +   
Sbjct: 214 PFTMGLVSLPAFIAITAMTFLTVPIGARLTHVLPTGRLRQVFALFIILAAMNM 266



 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 12/119 (10%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR-- 91
           G +  + G+GGG   VP L       G   +  +  + G  L +  P SV   +   +  
Sbjct: 155 GFVCAMIGIGGGTFGVPAL----TAYGTPINRAIATSAGFGLLISLPASVTYLLASPKDL 210

Query: 92  ------HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                  G +++        +  +T  + + +   +    L + FA+F +L  + ML++
Sbjct: 211 TLPPFTMGLVSLPAFIAITAMTFLTVPIGARLTHVLPTGRLRQVFALFIILAAMNMLRK 269


>gi|84515495|ref|ZP_01002857.1| membrane protein [Loktanella vestfoldensis SKA53]
 gi|84510778|gb|EAQ07233.1| membrane protein [Loktanella vestfoldensis SKA53]
          Length = 272

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 3/261 (1%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +V     ++V    +G L+GL GVGGG+V+VP     F ++G D    M + + TSL  I
Sbjct: 7   LVQMALFLLVVGAFAGVLAGLLGVGGGIVLVPAFFYVFSVLGFDSPQLMQICLATSLATI 66

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TSV S + H R G ++  ILK W   + I  V+  ++ + +    L   FA     + 
Sbjct: 67  IVTSVRSLLAHHRKGAVDWAILKSWAPGIAIGAVIGVMVAASLRSGTLQVVFATLAATVA 126

Query: 139 ILM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           I +   +         P   ++ +   V GFLS  +G+GGG F   +M  +   I++A A
Sbjct: 127 IYITFGKSHWRLGPVMPGGILRAVLSPVIGFLSVLMGIGGGSFGVPIMTLFNVPIHRAVA 186

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T+AG   +IA P++   +     +   PP+++G VN+ A ++++ ++++  P    L++ 
Sbjct: 187 TAAGFGVIIATPSVAAFML--IDIAVAPPFTIGAVNLVAFVLVIAMTLITAPWGAALAHR 244

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
                L   F   +   +   
Sbjct: 245 TDPIRLKRVFGAFLILVALNM 265



 Score = 38.9 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 18/131 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V S + G LS L G+GGG   VP+++          ++ +H A+ T+ G     + 
Sbjct: 146 ILRAVLSPVIGFLSVLMGIGGGSFGVPIMTLF--------NVPIHRAVATAAGFGVIIAT 197

Query: 84  MSFMEHRRH----------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            S                 G +N+      I +  IT    + +    D   L + F  F
Sbjct: 198 PSVAAFMLIDIAVAPPFTIGAVNLVAFVLVIAMTLITAPWGAALAHRTDPIRLKRVFGAF 257

Query: 134 CLLMGILMLKR 144
            +L+ + ML++
Sbjct: 258 LILVALNMLRK 268


>gi|254436865|ref|ZP_05050359.1| conserved domain protein, putative [Octadecabacter antarcticus 307]
 gi|198252311|gb|EDY76625.1| conserved domain protein, putative [Octadecabacter antarcticus 307]
          Length = 272

 Score =  176 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 3/230 (1%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AF  +G D    M + +GTSL  I  TS+ S   H + G +   IL+ W   + I
Sbjct: 38  PAFFYAFGALGYDSPQLMQICLGTSLATIIVTSLRSLNSHNKKGAVEWGILRGWGVGIVI 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             V+   + + +  S L   F    + +G+ M   R         P    + I   +TGF
Sbjct: 98  GAVIGVAVATQLRSSVLQVLFGGIGMCIGLYMTFGRSEWRLGDGMPKGLFRAIGSSLTGF 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +GVGGG F    M  +G  I++A AT++G   +IA PA++  +++   +   PP +
Sbjct: 158 LSVLMGVGGGSFGVPTMTLFGVPIHRAVATASGYGVIIAIPAVIGFLFT--DIAVAPPLT 215

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +G VN  A  +++ ++++  P    L++ +  K L   F + +   +   
Sbjct: 216 VGAVNFAAFGVVVAMTLITAPWGAALAHRMDPKPLKRVFGIFLILVALNM 265



 Score = 44.3 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 10/124 (8%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            + S L+G LS L GVGGG   VP +     L G+     +  A G  + +  P  +   
Sbjct: 149 AIGSSLTGFLSVLMGVGGGSFGVPTM----TLFGVPIHRAVATASGYGVIIAIPAVIGFL 204

Query: 87  MEHRRH------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                       G +N       + +  IT    + +   +D   L + F IF +L+ + 
Sbjct: 205 FTDIAVAPPLTVGAVNFAAFGVVVAMTLITAPWGAALAHRMDPKPLKRVFGIFLILVALN 264

Query: 141 MLKR 144
           ML++
Sbjct: 265 MLRK 268


>gi|312884278|ref|ZP_07743987.1| hypothetical protein VIBC2010_10911 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368051|gb|EFP95594.1| hypothetical protein VIBC2010_10911 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 269

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 4/266 (1%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSL 75
           +  +  I    +     G L+GL G+GGGL++VPVLS       I      +  A+ TSL
Sbjct: 2   NESLLLIFYCALLGSGVGFLAGLLGIGGGLIIVPVLSAILIHFNILPSEQTIIAAIATSL 61

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
             I  TS  S + H ++G +   +    +  + +  +++  + S + +  +   FA+  +
Sbjct: 62  ASILFTSTSSAIAHNKNGNVPWALAPWVMTGVALGALLSGFIASLLPEQIVRSVFAVCVV 121

Query: 136 LMGILMLK---RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           L+ I ML    R+    +R  P+  +   +  +TG LS  +G+GGG     L+ F+   +
Sbjct: 122 LIAIKMLYSSTRNEKNTQRALPNKGLLTFFTTITGALSAMIGIGGGALLVPLLTFFSIDM 181

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            KA   ++    +IA    +  I SG     L     GFV + A+  I+  S    PL  
Sbjct: 182 KKAIGCASACGIVIALFGSIGYISSGIEQFSLKDGFAGFVYLPALFGIICTSWFTAPLGA 241

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVF 278
           K +  +    +   F+ ++F  +   
Sbjct: 242 KATQTLPVASIKKAFAGLLFIIAAKM 267



 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 20/131 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+   + ++G LS + G+GGG ++VP+L+          SI M  A+G +       ++ 
Sbjct: 147 LLTFFTTITGALSAMIGIGGGALLVPLLTFF--------SIDMKKAIGCASACGIVIALF 198

Query: 85  SFMEHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
             + +   G             + +  L   I     T  + +     +  + + KAFA 
Sbjct: 199 GSIGYISSGIEQFSLKDGFAGFVYLPALFGIICTSWFTAPLGAKATQTLPVASIKKAFAG 258

Query: 133 FCLLMGILMLK 143
              ++   M+ 
Sbjct: 259 LLFIIAAKMVF 269


>gi|90417553|ref|ZP_01225474.1| hypothetical protein GB2207_07766 [marine gamma proteobacterium
           HTCC2207]
 gi|90330645|gb|EAS45935.1| hypothetical protein GB2207_07766 [marine gamma proteobacterium
           HTCC2207]
          Length = 265

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 62/233 (26%), Positives = 101/233 (43%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +V+VP+L  AF+  G+   I  HVA+GTSL  I  TS+ S   H +   I   +++    
Sbjct: 26  VVIVPILILAFEFQGMAPEISTHVAIGTSLATILVTSLSSIYTHHQKAAIRWDLVRVITP 85

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
            + +  ++  L+   +  S L   F  F +++ + ML       E   P   +  + G  
Sbjct: 86  GILLGALLGGLVALSLRGSLLQLLFGAFLVIVALQMLFYKPATSEGSSPKPLLLGVAGTA 145

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            G LS   G+GGG  T   + F G  ++ A  ++A     IA  A +V          LP
Sbjct: 146 IGGLSTLFGIGGGSLTTPFLTFSGIKVHHAVGSAAACGFPIALAATVVYASVAIPSVHLP 205

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             +LG++ I A L I+  S     L   L++ I    L   F +++      F
Sbjct: 206 AATLGYIFIPAWLGIVVTSTPCARLGALLAHRIDATLLQRLFGILLVLLGGRF 258


>gi|254453788|ref|ZP_05067225.1| membrane protein [Octadecabacter antarcticus 238]
 gi|198268194|gb|EDY92464.1| membrane protein [Octadecabacter antarcticus 238]
          Length = 282

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 108/231 (46%), Gaps = 5/231 (2%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P    AF  +G D    M + +GTSL  I  TS+ S   H +   +   IL+ W   + I
Sbjct: 48  PAFFYAFSALGYDSPQLMQICLGTSLATIIVTSLRSLNSHHKKNAVEWDILRGWGLGIVI 107

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVTGF 168
             ++   + + +    L   F    + +G+ M L R         P   ++ +   +TGF
Sbjct: 108 GALIGVAVATQLRSVVLQALFGGLGMCIGLYMTLGRSDWRLGDAMPTGVLRAVLSPLTGF 167

Query: 169 LSGALGVGGGIF-TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           LS  +G+GGG F     M  YG  I++A AT++G   +IA PA++  +++   +   PP 
Sbjct: 168 LSVLMGIGGGSFGV-PTMTLYGVPIHRAVATASGYGVIIALPAVIGFLFA--DIAVAPPL 224

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++G VN GA  +++ ++++  P    L++ +  K L   F + +   +   
Sbjct: 225 TVGAVNFGAFGVVVAMTLITAPWGAALAHRLDPKPLKRVFGVFLILVALNM 275



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 10/127 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V S L+G LS L G+GGG   VP +     L G+     +  A G  + +  P  +
Sbjct: 156 VLRAVLSPLTGFLSVLMGIGGGSFGVPTM----TLYGVPIHRAVATASGYGVIIALPAVI 211

Query: 84  MSFMEHRRH------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G +N       + +  IT    + +   +D   L + F +F +L+
Sbjct: 212 GFLFADIAVAPPLTVGAVNFGAFGVVVAMTLITAPWGAALAHRLDPKPLKRVFGVFLILV 271

Query: 138 GILMLKR 144
            + ML++
Sbjct: 272 ALNMLRK 278


>gi|254491996|ref|ZP_05105174.1| conserved domain protein, putative [Methylophaga thiooxidans
           DMS010]
 gi|224462811|gb|EEF79082.1| conserved domain protein, putative [Methylophaga thiooxydans
           DMS010]
          Length = 263

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 1/212 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L   F    +   + +HVA+GTSL  I+ TS+ S   H R+GTI+  +++     L 
Sbjct: 30  VPILLLVFSWQTMSADVAIHVAIGTSLMTISLTSLSSMRAHHRYGTIDWILVRKLTPGLV 89

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           + ++  +++ +++   +L   F  F LLM   M          K   +     +G++TG 
Sbjct: 90  VGSISGAVIAANLSSQWLQSFFGAFALLMATRMWLPSPNTLSPKLLAHSGMSAYGLLTGV 149

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL-NGLPPW 227
           +S  +G+GGG      ++  G  I +A  T+A     IA   ++  I+ G         W
Sbjct: 150 ISAMVGIGGGTLVVPYLVMAGQQIQRAVGTAAACGFPIAVSGVIGFIWMGLSQQTNTSSW 209

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             GFV+  A L I+  SI + P+   ++  + 
Sbjct: 210 QTGFVHWQAFLGIISTSIFMAPVGAIMAKKLS 241



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 38/106 (35%), Gaps = 21/106 (19%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM-- 87
             L+G +S + G+GGG ++VP L  A           +  A+GT+     P +V   +  
Sbjct: 144 GLLTGVISAMVGIGGGTLVVPYLVMA--------GQQIQRAVGTAAACGFPIAVSGVIGF 195

Query: 88  -----------EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
                         + G ++ +     I        V ++M   + 
Sbjct: 196 IWMGLSQQTNTSSWQTGFVHWQAFLGIISTSIFMAPVGAIMAKKLS 241


>gi|332140098|ref|YP_004425836.1| hypothetical protein MADE_1003450 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|332143104|ref|YP_004428842.1| hypothetical protein MADE_1018600 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550120|gb|AEA96838.1| hypothetical protein MADE_1003450 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327553126|gb|AEA99844.1| hypothetical protein MADE_1018600 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 268

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 2/263 (0%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAF-QLMGIDDSICMHVAMGTSL 75
           D  V  I   ++   + G L+G+ G+GGGL++VP LS      MG+     M VA+ TSL
Sbjct: 2   DPFVVIIVSCLILGSVVGILAGMLGIGGGLIIVPALSYLLVHFMGMTTETVMPVAIATSL 61

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
             I  T   S + H + G I   I+      +    +  + + SH+    L   FA+  +
Sbjct: 62  STIIFTGTSSALAHYKLGNIQRYIVLYTGLGIAFGAIAGAQVASHMSGELLKDVFAVLVI 121

Query: 136 LMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           L+ + M+   +                G   G LS  +G+GGG      ++++  +I  A
Sbjct: 122 LIALQMIFG-KQKASDNEASKGTLAAVGGTAGILSALMGIGGGALLVPALVWFRVNIRAA 180

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
              +A    +IA       + +GW    +P  SLG+V + A   I+  S+    +  KL 
Sbjct: 181 IGCAAFCGLVIAVFGTTSFVIAGWNAIDVPEHSLGYVYLPATAGIVATSMFTANIGAKLG 240

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
             +  + L    + ++   S   
Sbjct: 241 QRVNVRVLKAMLACLLVLVSIRM 263



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 6/124 (4%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAM-GTSLGVIAP 80
           +      +G LS L G+GGG ++VP L          +G      + +A+ GT+  VIA 
Sbjct: 144 LAAVGGTAGILSALMGIGGGALLVPALVWFRVNIRAAIGCAAFCGLVIAVFGTTSFVIAG 203

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            + +   EH   G + +      +     T  + + +   V+   L    A   +L+ I 
Sbjct: 204 WNAIDVPEH-SLGYVYLPATAGIVATSMFTANIGAKLGQRVNVRVLKAMLACLLVLVSIR 262

Query: 141 MLKR 144
           M+  
Sbjct: 263 MILG 266


>gi|319778838|ref|YP_004129751.1| Protein of unknown function DUF81 [Taylorella equigenitalis MCE9]
 gi|317108862|gb|ADU91608.1| Protein of unknown function DUF81 [Taylorella equigenitalis MCE9]
          Length = 247

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 3/223 (1%)

Query: 46  LVMVPVLSKAFQLMG-IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWI 104
           +V+VP L+  F     +     +H+++ T++  I  TS+ S   H   G +   I   ++
Sbjct: 1   MVLVPFLTSLFSTFHNLPQQYIVHISIATAMATIMFTSLSSMRAHHLRGGVRWDIFIKFV 60

Query: 105 FVLPITTVV-TSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE-RKFPDNYVKYIW 162
             + I  ++   ++   +D  +L   FAIF    G  M ++       R  P  YV  + 
Sbjct: 61  PGILIGGLLSGGVIFKMIDIGWLALVFAIFVSYSGFNMFRKKSEEVSTRALPPAYVIALV 120

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           G+  G +SG +G GGG  T   +++    +  A  TSA     IA   ++  IY G    
Sbjct: 121 GVGIGLISGIVGAGGGFLTVPFLVWCSVPMRNAVGTSAACGFPIAVSNVIGYIYGGMSEI 180

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           G+    +GFV   A+L ++ +S++  P+  KL++ +    L  
Sbjct: 181 GVQNGLVGFVYWPALLALISMSVIFAPIGAKLAHSLPVNTLRK 223



 Score = 45.1 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 20/133 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +I +     G +SG+ G GGG + VP L           S+ M  A+GTS     P +V 
Sbjct: 116 VIALVGVGIGLISGIVGAGGGFLTVPFLVWC--------SVPMRNAVGTSAACGFPIAVS 167

Query: 85  SFMEHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           + + +   G             +    L   I +  I   + + +   +  + L K FA+
Sbjct: 168 NVIGYIYGGMSEIGVQNGLVGFVYWPALLALISMSVIFAPIGAKLAHSLPVNTLRKVFAV 227

Query: 133 FCLLMGILMLKRD 145
               + +LMLKR 
Sbjct: 228 LLFFLALLMLKRS 240


>gi|239994619|ref|ZP_04715143.1| hypothetical protein AmacA2_09054 [Alteromonas macleodii ATCC
           27126]
          Length = 268

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 112/263 (42%), Gaps = 2/263 (0%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAF-QLMGIDDSICMHVAMGTSL 75
           + +V  +   ++   + G L+G+ G+GGGL++VPVLS      MG+     M VA+ TSL
Sbjct: 2   EPLVVIVLSCLILGSVVGVLAGMLGIGGGLIIVPVLSYLLIHFMGMTTETVMPVAIATSL 61

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
             I  T + S   H + G I   ++      +       + + SH+    L   FA+  +
Sbjct: 62  STIIFTGMSSAFAHYKLGNIQRHVVLYTGLGIAFGAFAGAQIASHISGELLKDVFAVLVI 121

Query: 136 LMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           L+ + M+   +   E            G   G LS  +G+GGG      ++++  ++  A
Sbjct: 122 LIAMQMIFGKQKASENDA-SKGTLATVGGGAGLLSALMGIGGGALLVPALVWFRVNVRAA 180

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
              +A    +IA       I +G+    +P  SLG+V + A   I+  S+    +  KL 
Sbjct: 181 IGCAAFCGLIIAVFGTTSFIVAGYNAIDVPEHSLGYVYLPATAGIVATSMFTANIGAKLG 240

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
             +  + L    + ++   S   
Sbjct: 241 QRVNVRVLKAMLACLLVLVSIRM 263



 Score = 40.1 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 4/123 (3%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +      +G LS L G+GGG ++VP L          +G      + +A+  +   I   
Sbjct: 144 LATVGGGAGLLSALMGIGGGALLVPALVWFRVNVRAAIGCAAFCGLIIAVFGTTSFIVAG 203

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                +     G + +      +     T  + + +   V+   L    A   +L+ I M
Sbjct: 204 YNAIDVPEHSLGYVYLPATAGIVATSMFTANIGAKLGQRVNVRVLKAMLACLLVLVSIRM 263

Query: 142 LKR 144
           +  
Sbjct: 264 ILG 266


>gi|170728781|ref|YP_001762807.1| hypothetical protein Swoo_4460 [Shewanella woodyi ATCC 51908]
 gi|169814128|gb|ACA88712.1| protein of unknown function DUF81 [Shewanella woodyi ATCC 51908]
          Length = 270

 Score =  175 bits (445), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 62/250 (24%), Positives = 114/250 (45%), Gaps = 4/250 (1%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIAPTSVMSFME 88
             + G L+GL G+GGGL++VPVLS       +      +  A+ TSL  I  TS  S + 
Sbjct: 15  GSIVGFLAGLLGIGGGLIIVPVLSAILLHFEVLPPEQVVVAAIATSLASILFTSTSSAIA 74

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK---RD 145
           H ++G +  +I    +  + +  +++  M + + +  +   FA+  LL+ + M     + 
Sbjct: 75  HHKNGNVPWEIAPWIMTGVGLGALISGFMAALLPEQIVRLVFAVCVLLIALKMFYSSTKT 134

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
                RK P+  +  ++  +TG LS  +G+GGG     L+ ++   + KA   ++    +
Sbjct: 135 DTATTRKMPNKGLLTLFTTITGGLSAMIGIGGGALLVPLLTYFSIDMKKAIGCASACGIV 194

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           IA    +  I SG     L     GFV + A+L I+  S    PL  K +  +    +  
Sbjct: 195 IALFGSIGYISSGSAHFSLADGFAGFVYLPALLGIVCTSWFTAPLGAKATAHLPVPLIKK 254

Query: 266 GFSMIMFTTS 275
            F+ ++   +
Sbjct: 255 IFAGLLLAIA 264



 Score = 42.0 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 54/132 (40%), Gaps = 20/132 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+ + + ++G LS + G+GGG ++VP+L+          SI M  A+G +       ++ 
Sbjct: 147 LLTLFTTITGGLSAMIGIGGGALLVPLLTYF--------SIDMKKAIGCASACGIVIALF 198

Query: 85  SFMEHRRHGTINMKILKDWIFVLPI------------TTVVTSLMISHVDKSFLNKAFAI 132
             + +   G+ +  +   +   + +            T  + +   +H+    + K FA 
Sbjct: 199 GSIGYISSGSAHFSLADGFAGFVYLPALLGIVCTSWFTAPLGAKATAHLPVPLIKKIFAG 258

Query: 133 FCLLMGILMLKR 144
             L + + M   
Sbjct: 259 LLLAIAVNMYFG 270


>gi|319425547|gb|ADV53621.1| protein of unknown function DUF81 [Shewanella putrefaciens 200]
          Length = 266

 Score =  175 bits (445), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 70/252 (27%), Positives = 119/252 (47%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D ++    + +      G ++GL G+GGGL++VP L      +GI  S   H+A+ TSL 
Sbjct: 2   DSLLTVFFICLALGAFVGFMAGLLGIGGGLIVVPALLYILPSVGISSSQLPHIAIATSLA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I  TS+ S   H + G I   + K  +  L +  + +  +   +    L + FAIF +L
Sbjct: 62  AIILTSISSARAHHKRGNIPWSLFKSMLPGLVLGALASGFIAERIPADTLQRGFAIFVIL 121

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           M I M+   +    R+ P+ +V +I       L+G  G+GGGI     + FYG  + +A 
Sbjct: 122 MTIQMVYPFKTESNRQLPNAFVLFIASAFIAVLAGLTGIGGGILVVPFLTFYGLQMRQAV 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             SA +  LI+       I +G     LP  ++GF+ + A+  ++  SI + P+  K + 
Sbjct: 182 GFSAAMGFLISLSGSFGYIIAGMDAPELPYGTVGFIYLPALFGLIITSIFMAPVGVKAAS 241

Query: 257 MIGKKYLTIGFS 268
            +    L   F+
Sbjct: 242 TLPTPVLKKIFA 253


>gi|120599817|ref|YP_964391.1| hypothetical protein Sputw3181_3020 [Shewanella sp. W3-18-1]
 gi|146292247|ref|YP_001182671.1| hypothetical protein Sputcn32_1144 [Shewanella putrefaciens CN-32]
 gi|120559910|gb|ABM25837.1| protein of unknown function DUF81 [Shewanella sp. W3-18-1]
 gi|145563937|gb|ABP74872.1| protein of unknown function DUF81 [Shewanella putrefaciens CN-32]
          Length = 266

 Score =  175 bits (444), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 119/252 (47%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D ++    + +      G ++GL G+GGGL++VP L      +GI  S   H+A+ TSL 
Sbjct: 2   DSLLTVFFICLALGAFVGFMAGLLGIGGGLIVVPALLYILPSVGISSSQLPHIAIATSLA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I  TS+ S   H + G I   + K  +  L +  + +  +   +    L + FAIF +L
Sbjct: 62  AIILTSISSARAHHKRGNIPWSLFKSMLPGLVLGALASGFIAERIPADTLQRGFAIFVIL 121

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           M I M+   +    R+ P+ +V ++       L+G  G+GGGI     + FYG  + +A 
Sbjct: 122 MTIQMVYPFKTESNRQLPNAFVLFVASAFIAVLAGLTGIGGGILVVPFLTFYGLQMRQAV 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             SA +  LI+       I +G     LP  ++GF+ + A+  ++  SI + P+  K + 
Sbjct: 182 GFSAAMGFLISLSGSFGYIIAGMDAPELPYGTVGFIYLPALFGLIITSIFMAPVGVKAAS 241

Query: 257 MIGKKYLTIGFS 268
            +    L   F+
Sbjct: 242 TLPTPVLKKIFA 253


>gi|254455723|ref|ZP_05069152.1| conserved domain protein [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082725|gb|EDZ60151.1| conserved domain protein [Candidatus Pelagibacter sp. HTCC7211]
          Length = 278

 Score =  175 bits (444), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 146/269 (54%), Gaps = 2/269 (0%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  L  + +++ + ++ +A+ ++G ++GL GVGGG++MVP L  AF ++  D +  MH++
Sbjct: 1   MEILDINEIINLLVVLSIAASVAGFMAGLLGVGGGIIMVPALYYAFTVLDFDIATRMHLS 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL +I PTSV+S   H  +  ++ K++K +   + +  +  + +  ++  S     F
Sbjct: 61  VGTSLAIIIPTSVISSKTHMEYDAVDFKLVKSFGIFIVLGVIGGTFLAVNLKTSTFVLFF 120

Query: 131 AIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
           ++   ++G+  +  R+++    K   + +K I G++ GF+S  LG+GGG      M  +G
Sbjct: 121 SVMAFIVGLFFIFFREKVVENPKKIKDSIKNISGIIVGFISVLLGIGGGSLMVPFMRTFG 180

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG-WGLNGLPPWSLGFVNIGAVLIILPISILIT 248
             I K+  T++ +  LIA    +  I  G    N   P+S+G++N+   ++ +P+++L+ 
Sbjct: 181 YDIRKSIGTASAIGFLIALSGTITMITGGKIAANINTPFSIGYINLLGFIVFVPVTMLMA 240

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            +  K  Y + KK L+  F   +   S  
Sbjct: 241 RIGAKAVYKLDKKLLSKIFGTFLIAVSIR 269



 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 53/120 (44%), Gaps = 5/120 (4%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVL----SKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           ++  + G +S L G+GGG +MVP +        + +G   +I   +A+  ++ +I    +
Sbjct: 152 ISGIIVGFISVLLGIGGGSLMVPFMRTFGYDIRKSIGTASAIGFLIALSGTITMITGGKI 211

Query: 84  MS-FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +        G IN+     ++ V  +   + +  +  +DK  L+K F  F + + I   
Sbjct: 212 AANINTPFSIGYINLLGFIVFVPVTMLMARIGAKAVYKLDKKLLSKIFGTFLIAVSIRSF 271


>gi|269468135|gb|EEZ79842.1| predicted permease [uncultured SUP05 cluster bacterium]
          Length = 260

 Score =  175 bits (444), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 74/254 (29%), Positives = 121/254 (47%), Gaps = 2/254 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++     SG ++GL GVGGGL+MVP L     +  +  ++ MH A+GT+L  I  TS
Sbjct: 4   IVSLLFLGAFSGFIAGLLGVGGGLIMVPALLYLL-VDSVSQTVLMHTAVGTALAAIVFTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H +HG I+ +  K     + +     +L+   +   F+   FA+F   + I+M 
Sbjct: 63  ISSVRAHHQHGAIHWQYFKKLTPTILLGAFSGALLTKAMSFDFMRIFFALFEFSVAIIMY 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
                         +V  I G V G +S  +G+GGG  T   + +   +I  A ATSA V
Sbjct: 123 FGISSSSHVDSLSKWVWRITGYVIGLVSAIVGIGGGTMTTPFLTYNNVNIKNAIATSAAV 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA    L  I +GW +       LGF++  A++ I+ +S+L  PL  K+++ +  K 
Sbjct: 183 GMPIAVAGALGFIVAGWNVESATSG-LGFIHTEALISIVVMSVLFAPLGAKVAHSVDGKK 241

Query: 263 LTIGFSMIMFTTSF 276
           L   F++ +     
Sbjct: 242 LKKFFALFLAFLGM 255



 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 53/126 (42%), Gaps = 19/126 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +  ++ G +S + G+GGG +  P L+         +++ +  A+ TS  V  P +V   +
Sbjct: 141 ITGYVIGLVSAIVGIGGGTMTTPFLTY--------NNVNIKNAIATSAAVGMPIAVAGAL 192

Query: 88  -----------EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                           G I+ + L   + +  +   + + +   VD   L K FA+F   
Sbjct: 193 GFIVAGWNVESATSGLGFIHTEALISIVVMSVLFAPLGAKVAHSVDGKKLKKFFALFLAF 252

Query: 137 MGILML 142
           +G+ +L
Sbjct: 253 LGMAVL 258


>gi|330448520|ref|ZP_08312168.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328492711|dbj|GAA06665.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 269

 Score =  174 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 100/237 (42%), Gaps = 4/237 (1%)

Query: 47  VMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           V+VP+LS       I      + VA+ TSL  I  TS  S + H ++G +  ++    + 
Sbjct: 31  VIVPILSIILLHFTILPPDQVVIVAIATSLASILFTSTSSAIAHHKNGNVPWELAPWIMT 90

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY---CERKFPDNYVKYIW 162
            + +  +++  + + +  + +   FA+   L+ + M            R  P+N V    
Sbjct: 91  GVALGALISGFLAALLPANVVRMVFAVSVALIALKMFYSSTQKDNAKTRNMPNNVVLTFL 150

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
             + G LS  +G+GGG     L+ F+   + KA   ++    +IA    +  I SG    
Sbjct: 151 TTIMGGLSAMIGIGGGALLVPLLTFFSLDMKKAIGCASACGIVIALFGSIGYITSGSSYL 210

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +     GFV + A+  I+  S    PL  K ++ +    +   FS+++   +   A
Sbjct: 211 SISDGFAGFVYLPALFGIVCTSWFTAPLGAKATHHLPVPTIKKIFSVLLLAMATNMA 267


>gi|293602274|ref|ZP_06684722.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292819353|gb|EFF78386.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 273

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 123/260 (47%), Gaps = 1/260 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +   +      SG L+GL G+GGG+V+VPVL+   Q   +   + + +A+ TS+ VI 
Sbjct: 6   IPHFLGLAALGVASGFLAGLLGIGGGIVLVPVLTFFLQGQELSAGLAVKMAIATSMAVIL 65

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL-MISHVDKSFLNKAFAIFCLLMG 138
            TS  S   H R G ++ +I++     +   ++++SL + + +  + L   F++F L   
Sbjct: 66  FTSFSSVSAHHRRGAVDWQIVRGLTPGIVAGSLISSLGVFALLKGNVLAVVFSVFMLFSA 125

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           + M +  +    R  P        G   G LSG +GVGGG  +   + +    +++A AT
Sbjct: 126 VQMFRGRQPAAARGLPGAPGLLGAGSAIGALSGLVGVGGGFISVPFLSWCNVPVHRAVAT 185

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           SA +   IA   +   I  G    G P  S+GFV    + ++   S+L  PL  + ++ +
Sbjct: 186 SAALGFPIALANVGGFILGGLDTAGRPAHSMGFVWTPGLALVAAFSVLTAPLGARAAHRL 245

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F+ ++F  S   
Sbjct: 246 PVARLKRAFAGMLFAVSAYM 265


>gi|88860323|ref|ZP_01134961.1| hypothetical protein PTD2_14902 [Pseudoalteromonas tunicata D2]
 gi|88817521|gb|EAR27338.1| hypothetical protein PTD2_14902 [Pseudoalteromonas tunicata D2]
          Length = 269

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 105/232 (45%), Gaps = 3/232 (1%)

Query: 47  VMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           V+VP+LS       +      +  A+ TS+  I  TS  S + H ++G +   I    + 
Sbjct: 32  VIVPILSAILLHFEVLAAEQVVVAAIATSMASILFTSTSSAIAHHKNGNVPWGIAPWIMM 91

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR--LYCERKFPDNYVKYIWG 163
            + +  +++  + + + +  +   FA+  +L+ + ML   +     ERK P+  V  ++ 
Sbjct: 92  GVALGALISGFLAALLPEHVVRIVFAVSVVLIALKMLLSSKNDAPVERKLPNKGVLTVFT 151

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            +TG LS  +G+GGG     L+ F+   + KA   ++    +IA    +  I SG     
Sbjct: 152 TLTGGLSAMIGIGGGALLVPLLTFFSLDMKKAIGCASACGIVIALFGSIGYISSGSAYFA 211

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           L     GFV + A+  I+  S    PL  K ++ +    +   F++++F  +
Sbjct: 212 LKDGFAGFVYLPALFGIVCTSWFTAPLGAKATHYLPVSTIKKIFAVLLFVVA 263



 Score = 40.1 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 59/124 (47%), Gaps = 4/124 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++ V + L+G LS + G+GGG ++VP+L+       + +G   +  + +A+  S+G I+ 
Sbjct: 146 VLTVFTTLTGGLSAMIGIGGGALLVPLLTFFSLDMKKAIGCASACGIVIALFGSIGYISS 205

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S    ++    G + +  L   +     T  + +    ++  S + K FA+   ++ + 
Sbjct: 206 GSAYFALKDGFAGFVYLPALFGIVCTSWFTAPLGAKATHYLPVSTIKKIFAVLLFVVAVN 265

Query: 141 MLKR 144
           M+  
Sbjct: 266 MVVN 269


>gi|261253144|ref|ZP_05945717.1| hypothetical protein VIA_003169 [Vibrio orientalis CIP 102891]
 gi|260936535|gb|EEX92524.1| hypothetical protein VIA_003169 [Vibrio orientalis CIP 102891]
          Length = 269

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 103/236 (43%), Gaps = 3/236 (1%)

Query: 47  VMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           V+VP+LS       +      +  A+ TSL  I  TS  S + H R+G +  ++    + 
Sbjct: 32  VIVPILSVILIYFEVLPSDQVVIAAVATSLASILFTSTSSAIAHHRNGNVPWELAPWIMT 91

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL--YCERKFPDNYVKYIWG 163
            + +  +V+  M + + +  +   FAI  +L+ + M    +     ERK P+  V  +  
Sbjct: 92  GVALGALVSGFMAALLPEQVVRLVFAISVVLIALKMFYSSKSDQPTERKMPNKGVLTVLT 151

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            +TG LS  +G+GGG     L+ F+   + KA   ++    +IA    +  I SG     
Sbjct: 152 TITGGLSAMIGIGGGALLVPLLTFFSIDMKKAIGCASACGIVIALFGSIGYISSGSAHFS 211

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           +     GFV + A+  I+  S    PL  K +  +    +   F+M++   +   A
Sbjct: 212 ISDGFAGFVYLPALFGIVSTSWFTAPLGAKATNTLPVSTIKKIFAMLLLAMAGNMA 267



 Score = 38.1 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 54/132 (40%), Gaps = 20/132 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ V + ++G LS + G+GGG ++VP+L+          SI M  A+G +       ++ 
Sbjct: 146 VLTVLTTITGGLSAMIGIGGGALLVPLLTFF--------SIDMKKAIGCASACGIVIALF 197

Query: 85  SFMEHRRHGTINMKILKDWIFVLPI------------TTVVTSLMISHVDKSFLNKAFAI 132
             + +   G+ +  I   +   + +            T  + +   + +  S + K FA+
Sbjct: 198 GSIGYISSGSAHFSISDGFAGFVYLPALFGIVSTSWFTAPLGAKATNTLPVSTIKKIFAM 257

Query: 133 FCLLMGILMLKR 144
             L M   M   
Sbjct: 258 LLLAMAGNMAFS 269


>gi|24372911|ref|NP_716953.1| hypothetical protein SO_1333 [Shewanella oneidensis MR-1]
 gi|24347040|gb|AAN54398.1|AE015577_8 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 255

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 68/242 (28%), Positives = 115/242 (47%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +      G ++GL G+GGGL++VP L      +GI  +   H+A+ TSL  I  TS+ S 
Sbjct: 1   MALGAFVGFMAGLLGIGGGLIVVPALLYILPSVGISSTQLPHIAIATSLAAIILTSISSA 60

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             H + G +   + K  +  L I  + +  +   +    L K FAIF +LM I M    +
Sbjct: 61  RAHHKRGNVPWDLFKSMLPGLIIGALASGFIAERIPADTLQKGFAIFVILMTIQMAYPVK 120

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
               R+ P++ V ++   +   L+G  G+GGGI     + FYG  + +A   SA +  LI
Sbjct: 121 AESNRQLPNSVVLFVVSALVAVLAGLTGIGGGILIVPFLTFYGLQMRQAVGFSAAMGFLI 180

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           +       I +G     LP  +LG++ + A+  ++  S+L+ P+  K +       L   
Sbjct: 181 SLSGSFGYIIAGMNAPELPYGTLGYIYLPALFGLVITSVLMAPVGVKAASTWPTPVLKKI 240

Query: 267 FS 268
           F+
Sbjct: 241 FA 242


>gi|262277020|ref|ZP_06054813.1| membrane protein [alpha proteobacterium HIMB114]
 gi|262224123|gb|EEY74582.1| membrane protein [alpha proteobacterium HIMB114]
          Length = 277

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 82/269 (30%), Positives = 144/269 (53%), Gaps = 2/269 (0%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M+ L  + ++  I ++ +A+  SG ++GL GVGGG++MVP L  AF  +  D++I MH++
Sbjct: 1   MITLEINQLITLITVLAIAATASGFIAGLLGVGGGILMVPALYYAFSTLNFDENIIMHLS 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL +I PTS+MS   H +   +N  ++K +   + I   + + M +H+    L   F
Sbjct: 61  LGTSLAIIIPTSIMSAKTHYKFNAVNFDLIKSFGLPVVIGIFIGTFMATHLRTVQLLLMF 120

Query: 131 AIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
           +IF   +G+  +  R+++  + K    ++K I G   GF+S  LG+GGG      M  +G
Sbjct: 121 SIFSFCVGLFFIFIREKMGEKPKSVGTFIKSITGAFMGFMSVPLGIGGGSLGVPFMRLFG 180

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNG-LPPWSLGFVNIGAVLIILPISILIT 248
             I +A  TSA +  +I+        +SG   +    P S+G+VNI   L+ +P+++ + 
Sbjct: 181 YPIREAIGTSAAIGFIISLFGASSMAFSGLMFSDFAAPLSVGYVNIPGFLVFVPVTMTMA 240

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           P+  +L + I K  L+  F   +   S  
Sbjct: 241 PIGARLVHSIDKNLLSKIFGAFLIIISIR 269



 Score = 37.0 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 21/128 (16%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS-- 85
           +     G +S   G+GGG + VP +              +  A+GTS  +    S+    
Sbjct: 152 ITGAFMGFMSVPLGIGGGSLGVPFMRLF--------GYPIREAIGTSAAIGFIISLFGAS 203

Query: 86  -----------FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
                      F      G +N+     ++ V      + + ++  +DK+ L+K F  F 
Sbjct: 204 SMAFSGLMFSDFAAPLSVGYVNIPGFLVFVPVTMTMAPIGARLVHSIDKNLLSKIFGAFL 263

Query: 135 LLMGILML 142
           +++ I   
Sbjct: 264 IIISIRAF 271


>gi|126736855|ref|ZP_01752590.1| hypothetical protein RSK20926_10509 [Roseobacter sp. SK209-2-6]
 gi|126721440|gb|EBA18143.1| hypothetical protein RSK20926_10509 [Roseobacter sp. SK209-2-6]
          Length = 274

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L  A  L G++ ++ M VA+GTSL  I  T++ S   H R G I+M +LK W   + +
Sbjct: 38  PALYLALSLTGMEPALTMQVAVGTSLATIVFTALSSGYGHYRKGAIDMSLLKLWAPSILL 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL-YCERKFPDNYVKYIWGMVTGF 168
             V+  L+   V    L   FA    L+ + M+ R        K     V    G++ G 
Sbjct: 98  GVVLGGLLGGVVSGKVLIAVFATVAALVALDMVLRKGADSPTPKSFSKPVWATLGVLAGA 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+GGG     ++ F G  I KA  TSA +  +I  P  L+ + +G+G  GLP +S
Sbjct: 158 ISAMMGIGGGTVCVPMLNFLGYDIRKAVGTSAAIGFVIGVPGALIYMATGFGAEGLPAFS 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            G+VN+    +I+P+S     +  KL++ I +  L + F + +  TS   
Sbjct: 218 FGYVNLFCAAVIIPLSTSFARVGVKLAHSIPRPALRLAFGLFLALTSMRM 267



 Score = 42.0 bits (98), Expect = 0.097,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 20/125 (16%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             L+G +S + G+GGG V VP+L+             +  A+GTS  +     V   + +
Sbjct: 152 GVLAGAISAMMGIGGGTVCVPMLNFL--------GYDIRKAVGTSAAIGFVIGVPGALIY 203

Query: 90  ------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G +N+      I +      V   +   + +  L  AF +F  L 
Sbjct: 204 MATGFGAEGLPAFSFGYVNLFCAAVIIPLSTSFARVGVKLAHSIPRPALRLAFGLFLALT 263

Query: 138 GILML 142
            + M 
Sbjct: 264 SMRMF 268


>gi|329888316|ref|ZP_08266914.1| hypothetical protein BDIM_02390 [Brevundimonas diminuta ATCC 11568]
 gi|328846872|gb|EGF96434.1| hypothetical protein BDIM_02390 [Brevundimonas diminuta ATCC 11568]
          Length = 273

 Score =  172 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 70/230 (30%), Positives = 114/230 (49%), Gaps = 1/230 (0%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP L  AF ++G+     +HVA+GTSL  I  TS+ S   HR HG ++ ++LK W   +
Sbjct: 37  LVPALFYAFSVLGVGGESNLHVAIGTSLLTIVATSLRSLATHRAHGAVDEQVLKTWTPWV 96

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYIWGMVT 166
               ++ + +        L   + +  LL+   M L  +R    +  P  + +   G   
Sbjct: 97  AFGGLIGAAVAGFTSMEGLAIVYGVCLLLIAAQMGLLPERFTLRKDMPTGWGRRGVGTGI 156

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G LS  +GVGGG F  + M   G  I++A AT++G    I   A L     GW   G PP
Sbjct: 157 GLLSAMMGVGGGSFGGMTMTLCGRPIHQAVATASGFGLAIGAAAALGFAVFGWDAPGRPP 216

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            SLG+VN+ A +I+  ++ L  P   +L++ + +K L   F++ +  T+ 
Sbjct: 217 LSLGYVNVPAAVIMGLLTALTAPYGARLAHRLDRKMLRRAFAVYLLLTAL 266


>gi|158423254|ref|YP_001524546.1| putative permease [Azorhizobium caulinodans ORS 571]
 gi|158330143|dbj|BAF87628.1| putative permease [Azorhizobium caulinodans ORS 571]
          Length = 283

 Score =  172 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 2/229 (0%)

Query: 52  LSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITT 111
           L + F+++G+ D + M + +GTSL +I PTS+ SF  H+  G +   +LK       I  
Sbjct: 48  LYEVFRIIGVSDDVRMQLCIGTSLAIIVPTSIRSFHAHKARGLVVPGLLKVLGPPAVIGV 107

Query: 112 VVTSLMISHVDKSFLNKAFAIFCLLMGILML-KRDRLYCERKFPDNYVKYIWGMVTGFLS 170
            + S +   V+   L   F    +++    +  R       + P      IWG   G  S
Sbjct: 108 ALGSAIAGMVNGKILQGVFIALSVVLAARSISGRTDWRLGDQLPGKATLRIWGFFIGMAS 167

Query: 171 GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW-GLNGLPPWSL 229
             +G+ GG  + +L+  YG  I+ A ATSAGV   I  P +L    SGW  L+ LPP SL
Sbjct: 168 SMVGIAGGGLSTILLTLYGVPIHAAVATSAGVGIFIPLPGVLGYAISGWPHLSDLPPLSL 227

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V++    ++ P+S L  P+  +L++ + ++ L +GF + +   +  F
Sbjct: 228 GYVSVIGFALMAPVSTLTAPIGARLAHRLPRRGLEVGFGVFLLAVAARF 276



 Score = 35.8 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 21/130 (16%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +  F  G  S + G+ GG +     +    L G+     +H A+ TS GV     +  
Sbjct: 156 LRIWGFFIGMASSMVGIAGGGLS----TILLTLYGVP----IHAAVATSAGVGIFIPLPG 207

Query: 86  FMEHR-------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            + +                G +++        V  +T  + + +   + +  L   F +
Sbjct: 208 VLGYAISGWPHLSDLPPLSLGYVSVIGFALMAPVSTLTAPIGARLAHRLPRRGLEVGFGV 267

Query: 133 FCLLMGILML 142
           F L +    L
Sbjct: 268 FLLAVAARFL 277


>gi|109900143|ref|YP_663398.1| hypothetical protein Patl_3844 [Pseudoalteromonas atlantica T6c]
 gi|109702424|gb|ABG42344.1| protein of unknown function DUF81 [Pseudoalteromonas atlantica T6c]
          Length = 266

 Score =  172 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 2/263 (0%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQ-LMGIDDSICMHVAMGTSL 75
           D  +    +  +     G  +GL G+GGGL++VP L       + +   + M +A+ TSL
Sbjct: 2   DPALLIFLVCTLLGAFVGLFAGLLGIGGGLIIVPSLLYLLTEYVHLPLKVAMPMAIATSL 61

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
             I  T++ S   H + G +    L      + +  ++     + +    L   FA   L
Sbjct: 62  STIVLTAISSSRAHYKLGNLRQFYLLWTGLGISVGAIIGPQFATVISAQSLKTLFATLVL 121

Query: 136 LMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           L+ + M+       +R      +  + G++TG +S  +G+GGG      +L+    +  A
Sbjct: 122 LIAVQMVFLGNKNAKRDV-TKQLLLLIGVITGCISSVMGIGGGAIMVPALLWCRVDVRAA 180

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
              +A    +IA       I +GW    LP WS+GF+ + A   I+  S+    +  KL 
Sbjct: 181 IGCAAFSGLVIALFGSASFIVAGWNNEHLPQWSVGFIYLPATFGIVLTSVFTANIGAKLG 240

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
             +  K L   F+  +   S   
Sbjct: 241 RSLDTKLLKKIFAGFLVIVSLRM 263



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 4/124 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAP 80
           L+++   ++G +S + G+GGG +MVP L          +G      + +A+  S   I  
Sbjct: 143 LLLLIGVITGCISSVMGIGGGAIMVPALLWCRVDVRAAIGCAAFSGLVIALFGSASFIVA 202

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                 +     G I +      +     T  + + +   +D   L K FA F +++ + 
Sbjct: 203 GWNNEHLPQWSVGFIYLPATFGIVLTSVFTANIGAKLGRSLDTKLLKKIFAGFLVIVSLR 262

Query: 141 MLKR 144
           ML  
Sbjct: 263 MLLG 266


>gi|209364180|ref|YP_001425132.2| hypothetical membrane spanning protein [Coxiella burnetii Dugway
           5J108-111]
 gi|207082113|gb|ABS77056.2| hypothetical membrane spanning protein [Coxiella burnetii Dugway
           5J108-111]
          Length = 274

 Score =  172 bits (436), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 61/272 (22%), Positives = 121/272 (44%), Gaps = 4/272 (1%)

Query: 11  MVFLSKDCV-VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           M  ++++C+ ++ + L  +A  L   L G+ G+G  ++++P+L+      GI  ++ +H 
Sbjct: 1   MYSVAQECIMLNLLILCSIAGGLGALLQGMVGIGTSIILIPLLTLLLPHYGIPSNVAIHT 60

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T++  +  +S  + ++H +HG I   + K  I          +L+ S +   +L   
Sbjct: 61  ALATTMAAVVVSSTSALVKHHKHGNIQWPLFKKIIGFSVGGAFAGALIASFIPGRYLEYV 120

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDN---YVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
           F IF LL+   ML +     + K        +    G+  GF++  LG GG +F    + 
Sbjct: 121 FGIFMLLLAPYMLFKKPSNNQTKIESRLRLPILATGGLGIGFMASLLGAGGSVFMIPFLN 180

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
               ++  A  TS  +   +A    +  I++G        +++G++N    L I    IL
Sbjct: 181 ALKINMRYAVGTSTLIGLPVATIGTITYIFTGLAQMPHSSFTIGYLNWPIFLAISFAGIL 240

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             P   KL+ ++  K L   F++ M       
Sbjct: 241 CAPFGAKLTAILPTKILQRSFAIGMAIIGIKM 272


>gi|30249840|ref|NP_841910.1| hypothetical protein NE1888 [Nitrosomonas europaea ATCC 19718]
 gi|30180877|emb|CAD85799.1| Domain of unknown function DUF81 [Nitrosomonas europaea ATCC 19718]
          Length = 266

 Score =  171 bits (435), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 109/245 (44%), Gaps = 1/245 (0%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           + ++     G  +GL G+GGGL+MVP+L+  F  +G      +H+A+GT+  +I  T++ 
Sbjct: 6   VYLLTGSAVGFFAGLLGIGGGLLMVPILASVFMSLGFPADHILHIALGTTTAIITLTAIS 65

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S   H  HG +N  I++     +    +  S +   +    L   F +F       M   
Sbjct: 66  SLRAHHAHGAVNWWIVRYITPGIIAGALAGSTLAGQLSSRILGIIFVLFIYFAATQMWLN 125

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            +       P     +  G V G LS  + +GGG+ T   +      ++ A  T+A V  
Sbjct: 126 LKPGTGHVLPGKAGMFAAGSVIGALSSLVAIGGGLLTVPFLTACQIRLHHAIGTAAAVGF 185

Query: 205 LIAFPALLVRIYSGWGLNG-LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            +A  +      +G  L   LP ++LG++ + A++ +   S +  PL  + ++++    L
Sbjct: 186 PVALASAAGYAINGLLLTQPLPDYALGYIYLPALITVGLASTVTAPLGARAAHVLPAALL 245

Query: 264 TIGFS 268
              F+
Sbjct: 246 RKIFA 250


>gi|307293764|ref|ZP_07573608.1| protein of unknown function DUF81 [Sphingobium chlorophenolicum
           L-1]
 gi|306879915|gb|EFN11132.1| protein of unknown function DUF81 [Sphingobium chlorophenolicum
           L-1]
          Length = 276

 Score =  171 bits (435), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 72/231 (31%), Positives = 103/231 (44%), Gaps = 2/231 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L     L+G       HVA+GTS   I  TS+ S + H + G +  +ILK W   + +
Sbjct: 39  PALFVVLPLLGGTHEAIAHVAIGTSAATIIVTSIRSLLAHAKRGAVEFEILKTWAPWIIL 98

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD--RLYCERKFPDNYVKYIWGMVTG 167
              V  L+   VD   L   FA+   LM +  L             P    +       G
Sbjct: 99  GDGVGVLLAGRVDGHILTMIFAVGVFLMSLNFLLPKVGGKVISDTMPSGIARVGIAGGLG 158

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
             S  LG+GGG    ++M   G SI++A AT++G+  LIA P+ +     G    GLP  
Sbjct: 159 TFSALLGIGGGTIAIMVMTLCGRSIHRAIATASGIGTLIAIPSAIGFALIGLKETGLPWG 218

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           SLG+VNI A L I  +SIL  PL    ++ +    L   F + +   +FV 
Sbjct: 219 SLGYVNIPATLAIASMSILTAPLGVAAAHSLPAAPLKKFFGVYLVIIAFVM 269


>gi|218709277|ref|YP_002416898.1| hypothetical protein VS_1284 [Vibrio splendidus LGP32]
 gi|218322296|emb|CAV18426.1| Conserved hypothetical protein; putative membrane protein [Vibrio
           splendidus LGP32]
          Length = 272

 Score =  171 bits (435), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 3/252 (1%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIAPTSVMSFME 88
               G L+GL G+GGGL++VPVLS     + +      +  A+ TSL  I  TS  S + 
Sbjct: 18  GSGVGFLAGLLGIGGGLIIVPVLSSILLHLEVLPADQVVVAAIATSLASILFTSTSSALA 77

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
           H ++G +   +    +  + +  +++  M + + +  +   FA+  +L+ I M    +  
Sbjct: 78  HHKNGNVPWDLAPWIMLGVALGALISGFMAALLPEKVVRIVFAVSVVLIAIKMFLSSKSD 137

Query: 149 C--ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
              ERK P+  V  +   +TG LS  +G+GGG     L+ F+   + KA   ++    +I
Sbjct: 138 TPKERKLPNKGVLTVLTTITGGLSAMIGIGGGALLVPLLTFFSVDMKKAIGCASACGIVI 197

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           A    +  I SG     L     GFV + A+L I+  S    PL  K +  +    +   
Sbjct: 198 ALFGSIGYISSGSSHFALTDGFAGFVYLPALLGIVCTSWFTAPLGAKATNHLPVPTIKKI 257

Query: 267 FSMIMFTTSFVF 278
           FS+++   +   
Sbjct: 258 FSVLLVVIAASM 269



 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 54/132 (40%), Gaps = 20/132 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ V + ++G LS + G+GGG ++VP+L+          S+ M  A+G +       ++ 
Sbjct: 149 VLTVLTTITGGLSAMIGIGGGALLVPLLTFF--------SVDMKKAIGCASACGIVIALF 200

Query: 85  S------------FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                         +     G + +  L   +     T  + +   +H+    + K F++
Sbjct: 201 GSIGYISSGSSHFALTDGFAGFVYLPALLGIVCTSWFTAPLGAKATNHLPVPTIKKIFSV 260

Query: 133 FCLLMGILMLKR 144
             +++   M+ R
Sbjct: 261 LLVVIAASMVAR 272


>gi|261855473|ref|YP_003262756.1| hypothetical protein Hneap_0864 [Halothiobacillus neapolitanus c2]
 gi|261835942|gb|ACX95709.1| protein of unknown function DUF81 [Halothiobacillus neapolitanus
           c2]
          Length = 272

 Score =  171 bits (434), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 1/233 (0%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +VMVPVL   FQ MG+     M +A GTSL  + PT++ S   H R G +++ I + W  
Sbjct: 34  IVMVPVLFFIFQAMGVGSLDAMSMATGTSLAGMIPTAISSVRAHHRKGNVDVGIFRTWWI 93

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
            + I  +  S++++     +    FA+  L + I M    +    +  P    + I   +
Sbjct: 94  FILIGVITGSVLVTQFRSRWFVVLFALIALFVAIRMFL-HKTVAAQALPRLIWQRISAFM 152

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            GFLS   G+GGG     L+  +    ++A  ++A    +IA P  LV +  G      P
Sbjct: 153 LGFLSVMSGLGGGTIGVPLLTRFHVPAHRAVGSAAAFGLVIAIPGALVMLVLGQSPADAP 212

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             ++G VN+ A+L ++P+SIL  P+  KL   +  + L   F++++  T    
Sbjct: 213 LGTVGLVNLPALLTMVPLSILFAPVGVKLGARLPAQQLKKVFAVVLAITGIRM 265



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 4/121 (3%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           +++F+ G LS + G+GGG + VP+L++    A + +G   +  + +A+  +L ++     
Sbjct: 148 ISAFMLGFLSVMSGLGGGTIGVPLLTRFHVPAHRAVGSAAAFGLVIAIPGALVMLVLGQS 207

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +       G +N+  L   + +  +   V   + + +    L K FA+   + GI ML 
Sbjct: 208 PADAPLGTVGLVNLPALLTMVPLSILFAPVGVKLGARLPAQQLKKVFAVVLAITGIRMLL 267

Query: 144 R 144
            
Sbjct: 268 S 268


>gi|294013133|ref|YP_003546593.1| putative permease [Sphingobium japonicum UT26S]
 gi|292676463|dbj|BAI97981.1| putative permease [Sphingobium japonicum UT26S]
          Length = 276

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 71/231 (30%), Positives = 104/231 (45%), Gaps = 2/231 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L     L+G       HVA+GTS   I  TS+ S + H + G +  +ILK W   + +
Sbjct: 39  PALFVVLPLLGGTHEAIAHVAIGTSAATIIVTSIRSLLAHAKRGAVEFEILKTWAPWIIL 98

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD--RLYCERKFPDNYVKYIWGMVTG 167
              V  L+   VD   L   FA+   LM +  L             P    +       G
Sbjct: 99  GDGVGVLLAGRVDGHILTMIFAVGVFLMSLNFLLPKVGGKVISDTMPSGIARVGIAGGLG 158

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
             S  LG+GGG    ++M   G SI++A AT++G+  LIA P+ +     G    GLP  
Sbjct: 159 TFSALLGIGGGTIAIMVMTLCGRSIHRAIATASGIGTLIAIPSAIGFALIGLKEGGLPWG 218

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           SLG+VNI A L I  +S+L  PL   +++ +    L   F + +   +FV 
Sbjct: 219 SLGYVNIPATLAIASMSVLTAPLGVAVAHAMPAAPLKKIFGVYLVIIAFVM 269



 Score = 35.4 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 43/119 (36%), Gaps = 12/119 (10%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           GT S L G+GGG + +        L G      +  A G    +  P+++   +   + G
Sbjct: 158 GTFSALLGIGGGTIAI----MVMTLCGRSIHRAIATASGIGTLIAIPSAIGFALIGLKEG 213

Query: 94  TINM--------KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +                  +  +T  +   +   +  + L K F ++ +++  +M + 
Sbjct: 214 GLPWGSLGYVNIPATLAIASMSVLTAPLGVAVAHAMPAAPLKKIFGVYLVIIAFVMFRN 272


>gi|126727613|ref|ZP_01743445.1| hypothetical protein RB2150_15580 [Rhodobacterales bacterium
           HTCC2150]
 gi|126703029|gb|EBA02130.1| hypothetical protein RB2150_15580 [Rhodobacterales bacterium
           HTCC2150]
          Length = 275

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 70/253 (27%), Positives = 129/253 (50%), Gaps = 3/253 (1%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQ--LMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
              ++GTL+GL GVGGG+V+VPVL    +  L+ +D S+ +H A+ TSL  I PTS+ S 
Sbjct: 17  VGAIAGTLAGLLGVGGGIVIVPVLYWLTETGLLQVDQSVAIHFAVATSLATIIPTSISSA 76

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             H + G+I++++   W   +    ++  L+ +  D S L+  F +  +++ I M+    
Sbjct: 77  RAHHKKGSIDLEMFHAWAPWMVFGALLGGLLAAKFDASLLSGVFGVIAVIVVINMVNPKP 136

Query: 147 LYCERKFPDNY-VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
               +  P +   K I     G  S  +G+GGG  +  ++      +++A  T++     
Sbjct: 137 FTLAKAPPKSIMAKAIIAGPIGAFSAMMGIGGGTLSVPILTLLSFPVHRAVGTASLFGLT 196

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           IA P +L   ++G  +NGL P SLG++N+ A + I   +    PL  K+++ +    L +
Sbjct: 197 IAVPGVLGFAFAGQNINGLLPISLGYINLPAAVTISIATFFCAPLGVKIAHRLNASGLRL 256

Query: 266 GFSMIMFTTSFVF 278
            F++ +  +    
Sbjct: 257 AFAVFLGISGIKM 269



 Score = 38.5 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 48/132 (36%), Gaps = 20/132 (15%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I    + +   G  S + G+GGG + VP+L+          S  +H A+GT+       +
Sbjct: 147 IMAKAIIAGPIGAFSAMMGIGGGTLSVPILTLL--------SFPVHRAVGTASLFGLTIA 198

Query: 83  VMSFMEHR------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           V   +                 G IN+               +   +   ++ S L  AF
Sbjct: 199 VPGVLGFAFAGQNINGLLPISLGYINLPAAVTISIATFFCAPLGVKIAHRLNASGLRLAF 258

Query: 131 AIFCLLMGILML 142
           A+F  + GI ML
Sbjct: 259 AVFLGISGIKML 270


>gi|68164577|gb|AAY87306.1| predicted permease [uncultured bacterium BAC17H8]
          Length = 284

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 8/235 (3%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   F  + +   I MH+ + TSL  I P S+ S  EH R G ++M + + W   + I
Sbjct: 42  PVLFLLFTYLEVPSGIVMHMVVATSLATIIPISLSSAREHYRRGAVDMAVFRHWAPFMLI 101

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK--------YI 161
              + + +   +D S+L   F    + +   M++      +     + +          I
Sbjct: 102 AAGIAAGLSGRLDSSYLQLLFGGIAIYVAATMIRGKTSAADAAPDGSTITPLGRGATGGI 161

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
              + G  S  +G+GGG     ++      +++A  T+A    LIA P  +    +G G 
Sbjct: 162 ISALIGAASALMGIGGGSIAVPVLSALQLPVHRAVGTAAAFGFLIAVPGAIGFAIAGLGT 221

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            G  P+SLGF+N+ A +II   S+   PL +++++ +  K L   F   +  ++ 
Sbjct: 222 EGRLPFSLGFINLPAAVIIFSTSLFFVPLGSRIAHALNPKRLRRAFGFFLLLSAL 276



 Score = 35.8 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 20/127 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + S L G  S L G+GGG + VPVLS           + +H A+GT+       +V   +
Sbjct: 161 IISALIGAASALMGIGGGSIAVPVLSAL--------QLPVHRAVGTAAAFGFLIAVPGAI 212

Query: 88  EH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                            G IN+               + S +   ++   L +AF  F L
Sbjct: 213 GFAIAGLGTEGRLPFSLGFINLPAAVIIFSTSLFFVPLGSRIAHALNPKRLRRAFGFFLL 272

Query: 136 LMGILML 142
           L  + +L
Sbjct: 273 LSALNIL 279


>gi|323494501|ref|ZP_08099606.1| hypothetical protein VIBR0546_20083 [Vibrio brasiliensis LMG 20546]
 gi|323311228|gb|EGA64387.1| hypothetical protein VIBR0546_20083 [Vibrio brasiliensis LMG 20546]
          Length = 269

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 101/232 (43%), Gaps = 3/232 (1%)

Query: 47  VMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           V+VP+LS      GI      +  A+ TSL  I  TS  S + H ++G +   +    + 
Sbjct: 32  VIVPILSIILLHFGILPSEQVVIGAIATSLASILFTSTSSAIAHHKNGNVPWNLAPWIMT 91

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY--CERKFPDNYVKYIWG 163
            + +  +++  M + + +  +   FA+  +L+ + M    +     +RK P+  V     
Sbjct: 92  GVALGALISGFMAALLPEQVVRIVFAVSVVLIALKMFYSSKSNEPTQRKMPNRGVLTTLT 151

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            + G LS  +G+GGG     L+ F+   + KA   ++    +IA    +  I SG     
Sbjct: 152 TIVGGLSAMIGIGGGALLVPLLTFFSIDMKKAIGCASACGIVIALFGSIGYITSGSAHFV 211

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           L     GFV + A+  I+  S    P+  K + ++    +   FS+++   +
Sbjct: 212 LADGFAGFVYLPALFGIVSTSWFTAPMGAKATQVLPVSTIKKLFSVLLLAMA 263



 Score = 35.8 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 4/117 (3%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + G LS + G+GGG ++VP+L+       + +G   +  + +A+  S+G I   S    +
Sbjct: 153 IVGGLSAMIGIGGGALLVPLLTFFSIDMKKAIGCASACGIVIALFGSIGYITSGSAHFVL 212

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                G + +  L   +     T  + +     +  S + K F++  L M   M+  
Sbjct: 213 ADGFAGFVYLPALFGIVSTSWFTAPMGAKATQVLPVSTIKKLFSVLLLAMAGNMVIN 269


>gi|315122957|ref|YP_004064963.1| hypothetical protein PSM_B0014 [Pseudoalteromonas sp. SM9913]
 gi|315016717|gb|ADT70054.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
          Length = 269

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 3/235 (1%)

Query: 47  VMVPVLSKAFQLMG-IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           V+VP+LS        +     + VA+ TSL  I  TS  S + H ++G +   I    + 
Sbjct: 32  VIVPILSMILLHFNALPPEQVVVVAIATSLASILFTSTSSAIAHHKNGNVPWNIAPWVMV 91

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE--RKFPDNYVKYIWG 163
            +    +++  M + + +  +   FA+  +L+ + M+   +      R  P+  +  ++ 
Sbjct: 92  GVAFGALISGFMAALLPEHVVRLVFAVSVVLIALKMIFSGKNDSAIARPLPNKGLLSVYT 151

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            +TG LS  +G+GGG     L+ F+   + KA   ++    +IA    L  I SG  L  
Sbjct: 152 TITGGLSAMIGIGGGAVLVPLLTFFSVDMKKAIGCASASGIVIALFGSLGYISSGSQLFS 211

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L     GFV + A+L I+  S    PL  K ++ +    +   F+ ++   +   
Sbjct: 212 LKQGFAGFVYLPALLGIVCTSWFTAPLGAKATHYLPVSTIKKIFAGLLIVMAINM 266



 Score = 43.5 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 4/124 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAP 80
           L+ V + ++G LS + G+GGG V+VP+L+       + +G   +  + +A+  SLG I+ 
Sbjct: 146 LLSVYTTITGGLSAMIGIGGGAVLVPLLTFFSVDMKKAIGCASASGIVIALFGSLGYISS 205

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S +  ++    G + +  L   +     T  + +    ++  S + K FA   ++M I 
Sbjct: 206 GSQLFSLKQGFAGFVYLPALLGIVCTSWFTAPLGAKATHYLPVSTIKKIFAGLLIVMAIN 265

Query: 141 MLKR 144
           M  R
Sbjct: 266 MFTR 269


>gi|323144582|ref|ZP_08079171.1| hypothetical protein HMPREF9444_01851 [Succinatimonas hippei YIT
           12066]
 gi|322415658|gb|EFY06403.1| hypothetical protein HMPREF9444_01851 [Succinatimonas hippei YIT
           12066]
          Length = 275

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 2/270 (0%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAF-QLMGIDDSICMHV 69
           M+ L    ++  + ++ V   ++G L+GL G+GGG++ VP L   F  ++ +D ++ M +
Sbjct: 1   MLGLDVSELIFTVGVLAVCGSIAGFLAGLLGIGGGVIFVPALYFVFISVLKVDPNLAMVL 60

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A GTSL  + PTS+ + +   R G  +M ++K W   +    VV S++ +     +L   
Sbjct: 61  ATGTSLMCMIPTSISAAISQYRRGNTDMHVIKRWSLGMLCGVVVGSVISAFYGGQWLAIL 120

Query: 130 FAIFCLLMGILMLKRDRLYCE-RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F    +L  I  L R       +  P  + + I        S  LG+GGG  T  ++   
Sbjct: 121 FGSVMILNSINTLFRANAKPAFKTLPRQFFQNIIAFCIACFSVMLGIGGGTLTVPILNAC 180

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
               +KA  TS+ VS  +  P  ++ I SG      P  + G VN+   + ++P+S+L  
Sbjct: 181 SVEPHKAIGTSSAVSLFVCVPGAIILILSGHTPPNAPIGTFGLVNLLGAICVIPLSVLAA 240

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           P   +    I    L   F++ +F  S   
Sbjct: 241 PYGVRFGKNIKPATLKRIFAIALFIVSVRM 270



 Score = 37.4 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 47/129 (36%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +F     S + G+GGG + VP+L+          S+  H A+GTS  V     V   +
Sbjct: 153 IIAFCIACFSVMLGIGGGTLTVPILNAC--------SVEPHKAIGTSSAVSLFVCVPGAI 204

Query: 88  EHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                G             +N+      I +  +          ++  + L + FAI   
Sbjct: 205 ILILSGHTPPNAPIGTFGLVNLLGAICVIPLSVLAAPYGVRFGKNIKPATLKRIFAIALF 264

Query: 136 LMGILMLKR 144
           ++ + ML  
Sbjct: 265 IVSVRMLLS 273


>gi|91225707|ref|ZP_01260736.1| hypothetical protein V12G01_06943 [Vibrio alginolyticus 12G01]
 gi|91189596|gb|EAS75871.1| hypothetical protein V12G01_06943 [Vibrio alginolyticus 12G01]
          Length = 268

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/257 (22%), Positives = 107/257 (41%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I   I A    G L+GL GVGGG + VP+ +  F L GI D+  +H+A+GTS+  +  T
Sbjct: 6   FIIYYITAGLGIGFLAGLVGVGGGGMAVPIFAFLFSLQGIADTEVVHLALGTSMASMIVT 65

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ S   H +   ++  ++   +  + + T   + + S++   +L   F++F L +   M
Sbjct: 66  TLGSMRAHYKKENVDSTMVVKMLSGVLVGTFCATFVASYLQGVYLAGFFSVFMLYVAYKM 125

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
                                G V G +S  + + G       ++     + +A  TSA 
Sbjct: 126 FLNTENEYNPNPHGAIGNITVGSVIGSVSALVSISGAGLIIPYLVQQNFEVKRAIGTSAA 185

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           +   IA    L  + +GW         LG++ + A++     S L T L  + +     K
Sbjct: 186 IGFPIALSGSLGYMLNGWENTDWNNLVLGYIYLPAMISFSISSYLTTSLGVRCAEYFPNK 245

Query: 262 YLTIGFSMIMFTTSFVF 278
            L     ++    SF  
Sbjct: 246 VLKKIVGILCVLLSFKM 262



 Score = 38.9 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 47/128 (36%), Gaps = 20/128 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I    + G++S L  + G  +++P L        +  +  +  A+GTS  +  P ++   
Sbjct: 144 ITVGSVIGSVSALVSISGAGLIIPYL--------VQQNFEVKRAIGTSAAIGFPIALSGS 195

Query: 87  MEHRRHG--TINM----------KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           + +  +G    +             +  +     +TT +      +     L K   I C
Sbjct: 196 LGYMLNGWENTDWNNLVLGYIYLPAMISFSISSYLTTSLGVRCAEYFPNKVLKKIVGILC 255

Query: 135 LLMGILML 142
           +L+   ML
Sbjct: 256 VLLSFKML 263


>gi|113461757|ref|YP_719826.1| permease [Haemophilus somnus 129PT]
 gi|170718528|ref|YP_001783738.1| hypothetical protein HSM_0389 [Haemophilus somnus 2336]
 gi|112823800|gb|ABI25889.1| conserved hypothetical protein [Haemophilus somnus 129PT]
 gi|168826657|gb|ACA32028.1| protein of unknown function DUF81 [Haemophilus somnus 2336]
          Length = 264

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 75/261 (28%), Positives = 128/261 (49%), Gaps = 1/261 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++ +  + +     +G L+GLFG+GGGL++VP L     ++G+ D++ M  A+GTS   I
Sbjct: 1   MLTFFLICLGVGTFAGFLAGLFGIGGGLIIVPTLVYLLPMVGVPDNLLMSTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS  S   H + G +    +K  I  L ++T V + ++S +DKS  +K FA+    M 
Sbjct: 61  VITSFSSAQRHYKLGNVVWDAVKILIPTLMLSTFVFTGIVSQLDKSLSSKLFAVLVAYMA 120

Query: 139 ILMLKRDRLYCER-KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           I M+   ++  +  K        I G++ G +S   G+GGG F    +   G  I KA  
Sbjct: 121 IRMVISTKIQIKNTKKLTPLSSVIGGVLIGIVSSIAGIGGGGFIVPFLNSRGVDIKKAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA    L+     L  + SGWG+  +P +SLG+V + AVL I   S   + +    +  
Sbjct: 181 SSAVCGMLLGLSGALSFMRSGWGVTEMPEYSLGYVYLPAVLGITITSFFTSKIGATTTSK 240

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +    L   F++++   +   
Sbjct: 241 LPVPTLKRYFAIMLCVIALNM 261


>gi|254507933|ref|ZP_05120062.1| thymidylate synthase [Vibrio parahaemolyticus 16]
 gi|219549169|gb|EED26165.1| thymidylate synthase [Vibrio parahaemolyticus 16]
          Length = 260

 Score =  169 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 3/236 (1%)

Query: 47  VMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           V+VP+LS       +      +  A+ TSL  I  TS  S + H R+G +  ++    + 
Sbjct: 23  VIVPILSVILLHFQVLPAEQVVICAIATSLASILFTSTSSALAHHRNGNVPWELAPWIMT 82

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR--LYCERKFPDNYVKYIWG 163
            + +  +V+  + + + +  +   FA+  +L+ + ML   +     ER  P+  +  +  
Sbjct: 83  GVALGALVSGFLAALLPEQVVRIVFAVSVVLIALKMLFGGKGDNSTERAMPNKGLLTVLT 142

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            +TG LS  +G+GGG     L+ F+   + KA   ++    +IA    +  I SG     
Sbjct: 143 TLTGGLSAMIGIGGGALLVPLLTFFSVDMKKAIGCASACGIVIALSGSVGYITSGSADFA 202

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           L     GFV + A+  I+  S    PL  K +  +    +   F+ ++   +   A
Sbjct: 203 LSDGFAGFVYLPALFGIVCTSWFTAPLGAKATQSLPVAVIKKIFAALLLAMATNMA 258



 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 44/120 (36%), Gaps = 20/120 (16%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           S + G+GGG ++VP+L+          S+ M  A+G +       ++   + +   G+ +
Sbjct: 149 SAMIGIGGGALLVPLLTFF--------SVDMKKAIGCASACGIVIALSGSVGYITSGSAD 200

Query: 97  MKILKDWIFVLPI------------TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +   +   + +            T  + +     +  + + K FA   L M   M   
Sbjct: 201 FALSDGFAGFVYLPALFGIVCTSWFTAPLGAKATQSLPVAVIKKIFAALLLAMATNMALS 260


>gi|221133981|ref|ZP_03560286.1| hypothetical protein GHTCC_03554 [Glaciecola sp. HTCC2999]
          Length = 269

 Score =  169 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 105/233 (45%), Gaps = 2/233 (0%)

Query: 47  VMVPVLSKAFQL-MGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++VP L+      +GI     + +A+ TSL  I  T + S   H + G +  K +     
Sbjct: 33  IVVPALTYLLSYFLGITPFDAITIAIATSLSTIILTGLSSSRAHYQLGNLEFKTIFFTGL 92

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
            + +  V   L  + +D   L   FA+  +L+ + M+   +    R   +  +    G+ 
Sbjct: 93  GIAVGAVAGGLFATSIDGQLLKGIFAVLVILVALYMIFGKK-TASRFSVNRPLLSFIGLK 151

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           TGF+S  +G+GGG      M+F+   + +A   ++    +IA       + +GW L  LP
Sbjct: 152 TGFISAMMGIGGGAILVPAMMFFQIDMRRAIGCASVSGLIIALFGTASFVIAGWSLPDLP 211

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           P+S+G+V + A + I+  S+   P+  K+   +  + L   F++ +   S   
Sbjct: 212 PYSMGYVYLPATVGIVLSSVFTAPIGAKMGQTMDTQKLKRIFAIFLVLVSIRM 264



 Score = 43.5 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 20/132 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+      +G +S + G+GGG ++VP +            I M  A+G +       ++ 
Sbjct: 144 LLSFIGLKTGFISAMMGIGGGAILVPAMMFF--------QIDMRRAIGCASVSGLIIALF 195

Query: 85  SFMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                               G + +      +     T  + + M   +D   L + FAI
Sbjct: 196 GTASFVIAGWSLPDLPPYSMGYVYLPATVGIVLSSVFTAPIGAKMGQTMDTQKLKRIFAI 255

Query: 133 FCLLMGILMLKR 144
           F +L+ I ML  
Sbjct: 256 FLVLVSIRMLIG 267


>gi|254228861|ref|ZP_04922283.1| domain of unknown function, putative [Vibrio sp. Ex25]
 gi|262396789|ref|YP_003288642.1| hypothetical protein VEA_001494 [Vibrio sp. Ex25]
 gi|151938538|gb|EDN57374.1| domain of unknown function, putative [Vibrio sp. Ex25]
 gi|262340383|gb|ACY54177.1| hypothetical protein VEA_001494 [Vibrio sp. Ex25]
          Length = 268

 Score =  169 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 59/257 (22%), Positives = 107/257 (41%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I   I A    G L+GL GVGGG + VP+ +  F L GI D+  +H+A+GTS+  +  T
Sbjct: 6   FIIYYITAGLGIGFLAGLVGVGGGGMAVPIFAFLFSLQGIADTEVVHLALGTSMASMIIT 65

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ S   H +   ++  ++   +  + + T   + + S++   +L   F++F L +   M
Sbjct: 66  TLGSMRAHYKKENVDSTMVVKMLSGVLVGTFCATFVASYLQGIYLAGFFSVFMLYVAYKM 125

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
                                G V G +S  + + G       ++     + +A  TSA 
Sbjct: 126 FLNTENEYNPNPHGAIGNITVGSVIGSVSALVSISGAGLIIPYLVQQNFEVKRAIGTSAA 185

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           +   IA    L  + +GW         LG++ + A++     S L T L  + +     K
Sbjct: 186 IGFPIALSGSLGYMLNGWENTDWNNLVLGYIYLPAMISFSISSYLTTSLGVRCAEYFPNK 245

Query: 262 YLTIGFSMIMFTTSFVF 278
            L     ++    SF  
Sbjct: 246 VLKKIVGILCVLLSFKM 262



 Score = 38.9 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 47/128 (36%), Gaps = 20/128 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I    + G++S L  + G  +++P L        +  +  +  A+GTS  +  P ++   
Sbjct: 144 ITVGSVIGSVSALVSISGAGLIIPYL--------VQQNFEVKRAIGTSAAIGFPIALSGS 195

Query: 87  MEHRRHG--TINM----------KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           + +  +G    +             +  +     +TT +      +     L K   I C
Sbjct: 196 LGYMLNGWENTDWNNLVLGYIYLPAMISFSISSYLTTSLGVRCAEYFPNKVLKKIVGILC 255

Query: 135 LLMGILML 142
           +L+   ML
Sbjct: 256 VLLSFKML 263


>gi|317484741|ref|ZP_07943641.1| hypothetical protein HMPREF0179_00993 [Bilophila wadsworthia 3_1_6]
 gi|316923993|gb|EFV45179.1| hypothetical protein HMPREF0179_00993 [Bilophila wadsworthia 3_1_6]
          Length = 268

 Score =  169 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 124/253 (49%), Gaps = 3/253 (1%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  + L+++     G LSGL GVGG ++++P+L+  F  +G       H+++GTSL  I
Sbjct: 1   MLSMLALLVLGGAFVGLLSGLLGVGGAVIIMPLLNVFFDRLGFSVDTTQHLSLGTSLATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS+ S + HRR+G++   I K     +   T+  +L+  H+   FL   FA F +L+G
Sbjct: 61  LFTSLSSVLAHRRYGSVRADIWKKMAPGIIAGTLGGALLAPHLPGLFLRGFFAFFVMLVG 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           + +L       +    +        ++ G +S   G+ G +   + +++       A  T
Sbjct: 121 VHLLFNSTPRPKTGRLERA-MLPVSILIGLISSLAGIAGTMLCVIFLVWAAIDWADAVGT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY-- 256
           SA +S  I+    L    +GW    LPP+S+GFV +  +  +L  S+ +  +  +L++  
Sbjct: 180 SAALSLPISLTGTLGYAIAGWNFPELPPYSVGFVYLPGMFCLLVSSMSMAVVGARLAHSP 239

Query: 257 MIGKKYLTIGFSM 269
            +  + L   F++
Sbjct: 240 RLPMQALRRCFAV 252


>gi|84387028|ref|ZP_00990051.1| putative membrane protein [Vibrio splendidus 12B01]
 gi|84378103|gb|EAP94963.1| putative membrane protein [Vibrio splendidus 12B01]
          Length = 269

 Score =  169 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 3/252 (1%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIAPTSVMSFME 88
               G L+GL G+GGGL++VPVLS     + I      +  A+ TSL  I  TS  S + 
Sbjct: 15  GSGVGFLAGLLGIGGGLIIVPVLSSILLHLEILPADQVVVAAIATSLASILFTSTSSALA 74

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
           H ++G +   +    +  + +  +V+  M + + +  +   FA+  +L+ I M    +  
Sbjct: 75  HHKNGNVPWDLAPWIMLGVALGALVSGFMAALLPEKVVRIVFAVSVVLIAIKMFLSSKND 134

Query: 149 C--ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
              ERK P+  V  +   +TG LS  +G+GGG     L+ F+   + KA   ++    +I
Sbjct: 135 APKERKLPNKGVLTVLTTITGGLSAMIGIGGGALLVPLLTFFSVDMKKAIGCASACGIVI 194

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           A    +  I SG     L     GFV + A+L I+  S    PL  K +  +    +   
Sbjct: 195 ALFGSIGYISSGSSHFALSDGFAGFVYLPALLGIVCTSWFTAPLGAKATNHLPVPTIKKI 254

Query: 267 FSMIMFTTSFVF 278
           FS+++   +   
Sbjct: 255 FSILLVVIAASM 266



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 54/132 (40%), Gaps = 20/132 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ V + ++G LS + G+GGG ++VP+L+          S+ M  A+G +       ++ 
Sbjct: 146 VLTVLTTITGGLSAMIGIGGGALLVPLLTFF--------SVDMKKAIGCASACGIVIALF 197

Query: 85  S------------FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                         +     G + +  L   +     T  + +   +H+    + K F+I
Sbjct: 198 GSIGYISSGSSHFALSDGFAGFVYLPALLGIVCTSWFTAPLGAKATNHLPVPTIKKIFSI 257

Query: 133 FCLLMGILMLKR 144
             +++   M+ R
Sbjct: 258 LLVVIAASMVAR 269


>gi|260913762|ref|ZP_05920238.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260632301|gb|EEX50476.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 263

 Score =  169 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 72/260 (27%), Positives = 126/260 (48%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++ ++ + ++   + G L+GLFG+GGGL++VP+L     ++G+ D + M  A+GTS   I
Sbjct: 1   MLTFLVVCLILGAIIGFLAGLFGIGGGLIIVPMLVYLLPMVGVPDPLLMSTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS  S   H + G I    +K  +  + ITT +  L IS +DK+  +K F+   + + 
Sbjct: 61  VVTSFSSAHRHHQLGNIVWSAVKVLVPTVMITTFICGLFISKLDKAIASKVFSCLVIYLA 120

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           I ML   +     K        I G++ G  S A G+GGG F    +   G  + KA  +
Sbjct: 121 IKMLLSIKPNTITKPLTTLSSVIGGVLIGIASCAAGIGGGGFIVPFLNSRGIEMKKAIGS 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           SA    L+    +L  + SGW +  +P +S+G+V + AV+ I   S   + +    +  +
Sbjct: 181 SAFCGTLLGLSGMLSFMLSGWNMPNMPEYSVGYVYLPAVVGITLTSFFTSKIGATATTKV 240

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F+ ++   +   
Sbjct: 241 PVSTLKRYFACLLILIAINM 260


>gi|332994535|gb|AEF04590.1| hypothetical protein ambt_15400 [Alteromonas sp. SN2]
          Length = 268

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 2/231 (0%)

Query: 49  VPVLSKAF-QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           VPVLS       G+     M VA+ TSL  I  T + S   H R G I+   +    F +
Sbjct: 34  VPVLSYLLIHFAGMTVETVMPVAIATSLSTIIFTGMSSAFAHYRLGNIHKPTVLYTGFGI 93

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            I  ++ + + SH+  + L   FA+  +++   M+   +   + +    +V    G  TG
Sbjct: 94  AIGAILGAQIASHISGALLKDIFAVLVIIIAAQMIFGKQKTSDSEA-SPWVLSCVGSGTG 152

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S  +GVGGG      ++++  +I  A   +A    LIA       + +GW   G+P W
Sbjct: 153 LISALMGVGGGALLVPALVWFRINIRLAIGCAAFSGLLIAVFGTASFVAAGWQQAGMPQW 212

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           SLG+V + A   I+  SI    +  KL   +  + L    + ++   S   
Sbjct: 213 SLGYVYLPATAGIVTTSIFTAGIGAKLGQRVNTRVLKAMLACLLVLVSIKM 263



 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 4/127 (3%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIA 79
            ++      +G +S L GVGGG ++VP L          +G      + +A+  +   +A
Sbjct: 142 WVLSCVGSGTGLISALMGVGGGALLVPALVWFRINIRLAIGCAAFSGLLIAVFGTASFVA 201

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                + M     G + +      +     T  + + +   V+   L    A   +L+ I
Sbjct: 202 AGWQQAGMPQWSLGYVYLPATAGIVTTSIFTAGIGAKLGQRVNTRVLKAMLACLLVLVSI 261

Query: 140 LMLKRDR 146
            M     
Sbjct: 262 KMFVGIN 268


>gi|227355684|ref|ZP_03840077.1| protein of hypothetical function DUF81 [Proteus mirabilis ATCC
           29906]
 gi|227164003|gb|EEI48900.1| protein of hypothetical function DUF81 [Proteus mirabilis ATCC
           29906]
          Length = 271

 Score =  168 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 5/260 (1%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I L ++   ++G  +GL G+GGG ++VP++        I   + M +A+ TS  VI 
Sbjct: 1   MEMILLFLIVGCITGFFAGLLGIGGGAIIVPIVMYVVSQQAIPADMVMKIALSTSFSVII 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            ++  S   H +H  I             +  +V + ++  +  + L   F IF      
Sbjct: 61  FSTASSAYSHNKHKAILWSQFPLLAVGTLLGMLVGTFLVQKLSNTLLQIIFCIFMAYTIY 120

Query: 140 LMLKRDRL-----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            +L + +        +            G + GF+S  +G+ GG  T  L+  +G +  K
Sbjct: 121 GLLTKKKEAERVENAQDPVVSKPALTTGGSLVGFISSFIGIAGGTITIPLLSHWGFNTRK 180

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             ATS+ +  +IA    ++ I  GW    L  + LGFV + A + I   SIL  P+  K+
Sbjct: 181 CIATSSMLGVIIATIGTVMGIVYGWQQTELADYYLGFVYLPAFIGISITSILTAPIGVKV 240

Query: 255 SYMIGKKYLTIGFSMIMFTT 274
           +Y +    +   F++ +   
Sbjct: 241 AYKLPIARVRQIFALFLLIV 260



 Score = 38.5 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 20/130 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +     L G +S   G+ GG + +P+LS                 + TS  +    + + 
Sbjct: 145 LTTGGSLVGFISSFIGIAGGTITIPLLSHW--------GFNTRKCIATSSMLGVIIATIG 196

Query: 86  F------------MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
                        +     G + +           +T  +   +   +  + + + FA+F
Sbjct: 197 TVMGIVYGWQQTELADYYLGFVYLPAFIGISITSILTAPIGVKVAYKLPIARVRQIFALF 256

Query: 134 CLLMGILMLK 143
            L++   ML 
Sbjct: 257 LLIVMTKMLY 266


>gi|89075631|ref|ZP_01162032.1| putative membrane protein [Photobacterium sp. SKA34]
 gi|89048638|gb|EAR54211.1| putative membrane protein [Photobacterium sp. SKA34]
          Length = 269

 Score =  168 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 99/233 (42%), Gaps = 4/233 (1%)

Query: 47  VMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           V+VP+LS       I      + VA+ TSL  I  TS  S + H ++G +   +    + 
Sbjct: 31  VIVPILSVILLHFAILPPEQVVIVAIATSLASILFTSTSSAIAHHKNGNVPWNLAPWIMT 90

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK---RDRLYCERKFPDNYVKYIW 162
            + +   ++  + + +  + +   FA+   L+   M     +      R  P+N+V    
Sbjct: 91  GVALGAFISGFLAALLPGNVVRIIFAVSVALIAFKMFYSSTKKETATTRNMPNNFVLTFL 150

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
             +TG LS  +G+GGG+    L+ F+   + KA   ++    +IA    +  + SG    
Sbjct: 151 TTITGGLSAMIGIGGGVLLVPLLTFFSLDMKKAIGCASACGIVIALFGSIGYVSSGISYL 210

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            +     GFV + A++ I+  S    PL  K +  +    +   FS ++   +
Sbjct: 211 SITDGFAGFVYLPALVGIVCTSWFTAPLGAKATNYLPVSIIKKIFSALLLAMA 263



 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 53/132 (40%), Gaps = 20/132 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++   + ++G LS + G+GGG+++VP+L+          S+ M  A+G +       ++ 
Sbjct: 146 VLTFLTTITGGLSAMIGIGGGVLLVPLLTFF--------SLDMKKAIGCASACGIVIALF 197

Query: 85  SFMEHRRHGT------------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
             + +   G             + +  L   +     T  + +   +++  S + K F+ 
Sbjct: 198 GSIGYVSSGISYLSITDGFAGFVYLPALVGIVCTSWFTAPLGAKATNYLPVSIIKKIFSA 257

Query: 133 FCLLMGILMLKR 144
             L M   M+  
Sbjct: 258 LLLAMATNMVIS 269


>gi|197285255|ref|YP_002151127.1| hypothetical protein PMI1396 [Proteus mirabilis HI4320]
 gi|194682742|emb|CAR42950.1| putative membrane protein [Proteus mirabilis HI4320]
          Length = 271

 Score =  168 bits (426), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 5/264 (1%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I L ++   ++G  +GL G+GGG ++VP++        I   + M +A+ TS  VI 
Sbjct: 1   MEMILLFLIVGCITGFFAGLLGIGGGAIIVPIVMYVVSQQAIPADMVMKIALSTSFSVII 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            ++  S   H +H  I             +  +V + ++  +  + L   F IF      
Sbjct: 61  FSTASSAYSHNKHKAILWSQFPLLAVGTLLGMLVGTFLVQKLSNTLLQIIFCIFMAYTIY 120

Query: 140 LMLKRDRL-----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            +L + +        +            G + GF+S  +G+ GG  T  L+  +G +  K
Sbjct: 121 GLLTKKKEAERVENAQDPVVSKPALTTGGSLVGFISSFIGIAGGTITIPLLSHWGFNTRK 180

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             ATS+ +  +IA    ++ I  GW    L  + LGFV + A + I   SIL  P+  K+
Sbjct: 181 CIATSSMLGVIIATIGTVMGIVYGWQQTELADYYLGFVYLPAFIGISITSILTAPIGVKV 240

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
           +Y +    +   F++ +       
Sbjct: 241 AYKLPIARVRQIFALFLLIVMAKM 264



 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 20/130 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +     L G +S   G+ GG + +P+LS                 + TS  +    + + 
Sbjct: 145 LTTGGSLVGFISSFIGIAGGTITIPLLSHW--------GFNTRKCIATSSMLGVIIATIG 196

Query: 86  F------------MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
                        +     G + +           +T  +   +   +  + + + FA+F
Sbjct: 197 TVMGIVYGWQQTELADYYLGFVYLPAFIGISITSILTAPIGVKVAYKLPIARVRQIFALF 256

Query: 134 CLLMGILMLK 143
            L++   ML 
Sbjct: 257 LLIVMAKMLY 266


>gi|262276011|ref|ZP_06053820.1| hypothetical protein VHA_002994 [Grimontia hollisae CIP 101886]
 gi|262219819|gb|EEY71135.1| hypothetical protein VHA_002994 [Grimontia hollisae CIP 101886]
          Length = 268

 Score =  167 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 89/229 (38%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PV +  F   GI +   +H+A+GTS+  +  T+  S   H + G ++  +       + +
Sbjct: 34  PVFTFLFTKQGIGNEDVVHLALGTSMAAMIVTTFGSMRAHLKKGNVDSNMAIKMSGAVLV 93

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            T + +   S++  ++L   F++F L +   M +                   G V G +
Sbjct: 94  GTFLATFTASYLQGTYLAGFFSLFMLFVAYKMFREKEYSFNPHPHGPVANTFAGFVIGSV 153

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           S  + + G   T   +      I +A  TSA +   IA    L  + +GW    L    L
Sbjct: 154 SALVSISGAGLTIPYLAQQNFEIKRAIGTSAAIGFPIALSGSLGYLINGWSNTDLDSMIL 213

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G++ + A++     S   T +  +L+     + L     ++    S   
Sbjct: 214 GYIYLPAMVTFSISSYFATRIGVRLACYFPSETLKKIIGVLCVILSIKM 262



 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 48/129 (37%), Gaps = 20/129 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
            A F+ G++S L  + G  + +P L+          +  +  A+GTS  +  P ++   +
Sbjct: 145 FAGFVIGSVSALVSISGAGLTIPYLA--------QQNFEIKRAIGTSAAIGFPIALSGSL 196

Query: 88  EHRRHG------------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            +  +G             I +  +  +       T +   +  +     L K   + C+
Sbjct: 197 GYLINGWSNTDLDSMILGYIYLPAMVTFSISSYFATRIGVRLACYFPSETLKKIIGVLCV 256

Query: 136 LMGILMLKR 144
           ++ I M  +
Sbjct: 257 ILSIKMFFQ 265


>gi|94497682|ref|ZP_01304250.1| hypothetical protein SKA58_04856 [Sphingomonas sp. SKA58]
 gi|94422899|gb|EAT07932.1| hypothetical protein SKA58_04856 [Sphingomonas sp. SKA58]
          Length = 276

 Score =  167 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 2/221 (0%)

Query: 60  GIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS 119
           G       HVA+GTS   I  TS+ S M H + G +  ++LK W   + +      L+ S
Sbjct: 49  GGTKDAIAHVAIGTSAATIIVTSIRSLMSHAKRGAVEFEVLKAWAPWIILGCGAGVLLAS 108

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRD--RLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
           HVD   L   F    +LM +  L             P   V+       G  S  LG+GG
Sbjct: 109 HVDGRTLKMIFGGGVVLMSLNFLLPKVSGKVVSDTMPSGIVRVGIAGGLGTFSSLLGIGG 168

Query: 178 GIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
           G    ++M   G +I++A AT++G+  LIA P  +     G    GLP  SLG++NI   
Sbjct: 169 GTIAIMVMTLCGRTIHRAIATASGIGTLIAIPTTIGFAIIGLKETGLPWGSLGYINIPGT 228

Query: 238 LIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L I  +S+L  PL    ++ +    L   F + +     + 
Sbjct: 229 LAIASMSMLTAPLGVAAAHSLPAGPLKKIFGVYLLIIGLLM 269



 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 12/119 (10%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           GT S L G+GGG + +        L G      +  A G    +  PT++   +   +  
Sbjct: 158 GTFSSLLGIGGGTIAI----MVMTLCGRTIHRAIATASGIGTLIAIPTTIGFAIIGLKET 213

Query: 94  TINMKILKDWIFVL--------PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +    L                +T  +       +    L K F ++ L++G+LML+ 
Sbjct: 214 GLPWGSLGYINIPGTLAIASMSMLTAPLGVAAAHSLPAGPLKKIFGVYLLIIGLLMLRN 272


>gi|226330327|ref|ZP_03805845.1| hypothetical protein PROPEN_04241 [Proteus penneri ATCC 35198]
 gi|225201122|gb|EEG83476.1| hypothetical protein PROPEN_04241 [Proteus penneri ATCC 35198]
          Length = 271

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 5/264 (1%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I L ++   ++G  +GL G+GGG ++VP++        I   + M +A+ TS  VI 
Sbjct: 1   MEMILLFLIVGCITGFFAGLLGIGGGAIIVPIVMYVVSQQAIPADMVMKIALSTSFSVII 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            ++  S   H +H  I  +          I  +V + ++  +  + L   F IF      
Sbjct: 61  FSTASSAYSHNKHKAILWQQFPLLSIGTIIGMLVGTFLVQKLSNTLLQIIFCIFMAYTIY 120

Query: 140 LMLKRDRL-----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            +L + +        +            G + GF+S  +G+ GG  T  L+ ++G +  K
Sbjct: 121 GLLTKKKEAERVENAQDPVISKPALTTGGSLVGFISSFIGIAGGTITIPLLSYWGFNTRK 180

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             ATS+ +  +IA    ++ I  GW    L  + LGF+ + A + I   SIL  P+  K+
Sbjct: 181 CIATSSMLGVIIATIGSIMGIVYGWQQTELANYYLGFIYLPAFIGISITSILTAPIGVKV 240

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
           +Y +    +   F++ +       
Sbjct: 241 AYRLPIARVRQIFALFLLIVMIKM 264



 Score = 40.8 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 16/128 (12%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT--SV 83
           +     L G +S   G+ GG + +P+LS      G +   C  +A  + LGVI  T  S+
Sbjct: 145 LTTGGSLVGFISSFIGIAGGTITIPLLSY----WGFNTRKC--IATSSMLGVIIATIGSI 198

Query: 84  MSF--------MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
           M          + +   G I +           +T  +   +   +  + + + FA+F L
Sbjct: 199 MGIVYGWQQTELANYYLGFIYLPAFIGISITSILTAPIGVKVAYRLPIARVRQIFALFLL 258

Query: 136 LMGILMLK 143
           ++ I ML 
Sbjct: 259 IVMIKMLY 266


>gi|163747979|ref|ZP_02155307.1| hypothetical protein OIHEL45_19316 [Oceanibulbus indolifex HEL-45]
 gi|161378749|gb|EDQ03190.1| hypothetical protein OIHEL45_19316 [Oceanibulbus indolifex HEL-45]
          Length = 280

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 91/269 (33%), Positives = 140/269 (52%), Gaps = 1/269 (0%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  L    ++  + + + A    G L+GL GVGGG+V+VP L  A    G+D +I M VA
Sbjct: 1   MNALDFGQLLPLLAIAVTAGIFGGILAGLLGVGGGIVIVPALYLALSTAGMDPAITMQVA 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL  I  TS+ S   H + G I+M +LK W   L +  V+ +L+  +V    L   F
Sbjct: 61  VGTSLATIVFTSLSSGYGHFKRGAIDMDLLKLWAPSLLVGVVIGALLGGYVSGLILVAVF 120

Query: 131 AIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
           A    L+ I M+ R  +     +     +  + G++TG LS  +G+GGG     L+ F G
Sbjct: 121 ATVAALVAIDMIFRKTKDDPTPRGFAKPIWAVLGVITGGLSAMMGIGGGTIGVPLLNFLG 180

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             I +A  TSA +  +I  P  +V   +G G  GLPP+SLG+VN+ A  II+P++     
Sbjct: 181 YDIRRAVGTSAAIGFIIGLPGAVVYALTGLGAEGLPPFSLGYVNLAAAAIIIPLTSSFAH 240

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +  KL++ I ++ L   F + +  TS   
Sbjct: 241 VGVKLAHSIPRRALRFAFGIFLMITSLRM 269


>gi|85710657|ref|ZP_01041721.1| hypothetical protein NAP1_09607 [Erythrobacter sp. NAP1]
 gi|85687835|gb|EAQ27840.1| hypothetical protein NAP1_09607 [Erythrobacter sp. NAP1]
          Length = 291

 Score =  166 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 72/234 (30%), Positives = 105/234 (44%), Gaps = 2/234 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VP L     LMG+      HVA+GTSL  I  TSV S M H    +++  +LK W   
Sbjct: 54  VVVPALVFLLPLMGVSAEQTAHVAVGTSLATIIFTSVRSTMSHAARDSVDFDLLKGWALW 113

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE--RKFPDNYVKYIWGM 164
           + + T   + +   V  + L   F +  L      L   R         P    +     
Sbjct: 114 VVLGTFAGAWIADFVSGAQLAMIFGVGVLGFAFYFLLPARAAEPMFAGMPAGIPRAGIAG 173

Query: 165 VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
             G  S  LG+GGG  T L M   GA I++A  T+AG+ A+IA P  +     G+G  GL
Sbjct: 174 TLGAFSALLGIGGGTLTTLTMTVCGAPIHRAIGTAAGMGAIIAIPGAIGFAIIGFGETGL 233

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           P  SLG+VN+ A L I+  SI+  PL   +++ +  + L   F + +       
Sbjct: 234 PWGSLGYVNLPAALGIIVTSIIFAPLGVAVAHNLAPQVLRRVFGIYLIVVGVTM 287


>gi|85713215|ref|ZP_01044243.1| Predicted permease [Idiomarina baltica OS145]
 gi|85692958|gb|EAQ30928.1| Predicted permease [Idiomarina baltica OS145]
          Length = 264

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 128/259 (49%), Gaps = 2/259 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I   ++   L+GTL+GL G+GGGLV+VP+L      +GI+ ++ M  A+ TSL  I 
Sbjct: 3   LTVIVWCLLGGVLAGTLAGLLGIGGGLVIVPLLVYLAPELGIEPALVMPTAIATSLATIC 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H R G      +   +  L +  +V + +++ VD  +L   F+   +++ I
Sbjct: 63  MTTASSAFSHYRSGLQERFWVVRVLPGLSLGAMVGAFLVTAVDPHWLKMLFSTVLVVLAI 122

Query: 140 LM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
            M L + +     K        +     G +SG +G+GGG  T   +   G S+ +A A 
Sbjct: 123 RMSLPQSKREVNAKHIKQRWLSVGSTSIGVISGLVGIGGGALTVPFLQRCGLSVRQAIAI 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+  S +I   A+L+ I  G+  +G+   +LG +++ A L I   S++  P+  KL++ +
Sbjct: 183 SSLGSFIIGCSAVLIFIIKGYS-SGVAHGALGIIHVPAWLTISIASVICAPVGAKLAHSL 241

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             K L   F++ +   +  
Sbjct: 242 PVKQLRRIFAVFLIIVAIK 260



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 3/122 (2%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSK--AFQLMGIDDSICMHVAMGTSLGVI-APT 81
            + V S   G +SGL G+GGG + VP L +        I  S      +G S  +I    
Sbjct: 142 WLSVGSTSIGVISGLVGIGGGALTVPFLQRCGLSVRQAIAISSLGSFIIGCSAVLIFIIK 201

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              S + H   G I++           I   V + +   +    L + FA+F +++ I +
Sbjct: 202 GYSSGVAHGALGIIHVPAWLTISIASVICAPVGAKLAHSLPVKQLRRIFAVFLIIVAIKL 261

Query: 142 LK 143
           + 
Sbjct: 262 IF 263


>gi|254786609|ref|YP_003074038.1| membrane protein [Teredinibacter turnerae T7901]
 gi|237686268|gb|ACR13532.1| membrane protein [Teredinibacter turnerae T7901]
          Length = 278

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 131/265 (49%), Gaps = 3/265 (1%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           + +++Y  +   +  ++G ++GLFGVGGG+V+VP L   F  +G++ S  + +A+ TSLG
Sbjct: 2   NELLEYSFVCACSGIVAGFVAGLFGVGGGIVIVPALYFVFGALGMEASHALAMAVATSLG 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I PTS+ S   H R G I+ ++++  +  L +     +L++S     +L+  F    L+
Sbjct: 62  TILPTSISSLRAHNRLGNIDWQVVRLAVPSLVLGACAGALLVSFFAGEWLSLVFGCTLLV 121

Query: 137 MGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
           +  L+L++ R              V  +       +S   GVGGG   + L++  G S++
Sbjct: 122 VAWLVLRKGRGATDAVGSAKLPPVVLRVAVFFLAVISALAGVGGGALGSPLLVMGGYSVH 181

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +A  T+A   A IA P++++         G PP+S+G +++ A  +I   + L+ P   K
Sbjct: 182 RAVGTAASFGAFIALPSIILIALFSVSPEGAPPYSIGLISLPAWALISVCTYLVAPFGAK 241

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVF 278
               +  ++L    +  +   S   
Sbjct: 242 FGRQLSDRHLATVLAAFLMFISVKM 266


>gi|154248169|ref|YP_001419127.1| hypothetical protein Xaut_4249 [Xanthobacter autotrophicus Py2]
 gi|154162254|gb|ABS69470.1| protein of unknown function DUF81 [Xanthobacter autotrophicus Py2]
          Length = 307

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 81/271 (29%), Positives = 142/271 (52%), Gaps = 2/271 (0%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           ++  +S   +V     ++    L+G ++G+ G+GGG V+VPVL + F  +G+DDS+ M +
Sbjct: 30  MLSSISTHELVLLAGAMLAGGVLTGLIAGMLGIGGGGVIVPVLYEVFGALGVDDSLRMQL 89

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
            +GTSL +I PT++ S   H + G +   ++++W        V  S + + V    L   
Sbjct: 90  CVGTSLAIIIPTAISSHNAHMKKGAVLPGVVRNWRVPAIAGIVTGSAIAAVVAGWVLQAV 149

Query: 130 F-AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F  +  LL    +L R+ +      P       +G V G  S  +G+ GG     ++L Y
Sbjct: 150 FVVVISLLGLKSLLGRNGIRIAEHLPGPGAMRAYGFVIGLASSLVGISGGGIATNILLLY 209

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGW-GLNGLPPWSLGFVNIGAVLIILPISILI 247
           G  I+ A ATSAG+  +I  P ++    +GW  L+ LPP SLG+V++   + I P++ L+
Sbjct: 210 GVPIHAAVATSAGIGIIIPIPGVIGYAIAGWPHLSQLPPLSLGYVSVIGFVCIAPVAALV 269

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            P   +L++ +G++ L IGF + +   +  F
Sbjct: 270 APFGARLAHRLGRRQLEIGFGLFLLLVASRF 300


>gi|301154749|emb|CBW14212.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 264

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 74/258 (28%), Positives = 125/258 (48%), Gaps = 1/258 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++ +I L ++   + G L+GLFG+GGGL++VP L     ++G+ + + M  A+GTS   I
Sbjct: 1   MLTFILLCLLVGSVVGFLAGLFGIGGGLIIVPTLVYLLPMVGVPEPLLMSTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T   S   H + G I  + +K    ++ I+  ++ L I  +D+    K FA   + + 
Sbjct: 61  VITGFSSAQRHHKLGNIVWRAVKVLAPMVMISVFISGLFIGKLDRDVSAKIFACLVVYLA 120

Query: 139 ILMLKRDRLYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             M+   +    +  P       I G++ G  S A GVGGG F    +   G  + KA  
Sbjct: 121 AKMVISIKKNTGKTKPLTTQASVIGGILIGMASSAAGVGGGGFIVPFLNSRGIDMKKAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA   AL+    +L  + SGWG   +P +SLG+V + AVL I   S   + L    +  
Sbjct: 181 SSAFCGALLGLSGMLSFMVSGWGNPSMPDYSLGYVYLPAVLGITGTSFFTSKLGATATSK 240

Query: 258 IGKKYLTIGFSMIMFTTS 275
           +    L  GF++++   +
Sbjct: 241 LPVPTLKKGFALLLVAIA 258


>gi|91791973|ref|YP_561624.1| hypothetical protein Sden_0611 [Shewanella denitrificans OS217]
 gi|91713975|gb|ABE53901.1| protein of unknown function DUF81 [Shewanella denitrificans OS217]
          Length = 294

 Score =  165 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 63/289 (21%), Positives = 111/289 (38%), Gaps = 30/289 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++++ + ++     G ++GLFG+GGG V+VP     F   G+   + MH A+ TS+  I 
Sbjct: 1   MEWLGIYLILGGAVGVMAGLFGIGGGGVLVPAFVSIFLAQGMQSHLVMHYAIATSMACIL 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  S   H   GT+   I+      + + T   + + + +    L   F++F L + I
Sbjct: 61  VTSFASMRAHNAKGTVQWPIVNSMAPWIILGTFAATFIATALSTQVLAGIFSVFMLSVAI 120

Query: 140 LMLKRDRLYCERKFP--DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            ML++                  + G+  G +S  + +GGG  T   +   G +I  A  
Sbjct: 121 KMLRQTSSGQVHDSKRLTPSSMGLAGLGIGAISALVSIGGGSLTVPYLSNRGINIKHAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLP----------------------------PWSL 229
           TSA +   IA  A L    +G                                     SL
Sbjct: 181 TSAAIGLPIAIAASLGYWVNGLTSAEAAQEMGIYDIGAQTRAVMGDGWWQVAAQSLDMSL 240

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           GF+++ A + +   S    P    L++ +    L   F+ ++   S   
Sbjct: 241 GFISVPAAVCVAFGSYFSAPYGVVLAHKLPVGLLKKLFACLLIILSLKM 289


>gi|218437446|ref|YP_002375775.1| hypothetical protein PCC7424_0441 [Cyanothece sp. PCC 7424]
 gi|218170174|gb|ACK68907.1| protein of unknown function DUF81 [Cyanothece sp. PCC 7424]
          Length = 266

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 3/256 (1%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+ V    SG ++GL G+GGG+V+VP L   FQLMGI  ++ MH+AMGTS+ V+  T+  
Sbjct: 9   LLSVLGLSSGLMAGLLGIGGGMVIVPGLFFIFQLMGIPHNLLMHLAMGTSMCVMICTATA 68

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S   H+  G I    L   +  + +  ++ S    H+    L   F  F L + + +L +
Sbjct: 69  STWTHQLKGDIRWDFLLKILPGIFLGLMIGSSASQHLSTRLLECIFGFFLLFVSVKILLK 128

Query: 145 DRLYCERKFPDNYVKYI--WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            +L  +++     + +I   G + G  SG LG+GGG  +   +++ G  + +   TSA  
Sbjct: 129 GKLTTQKQSQSPKLSFINLMGTIIGLKSGLLGIGGGAISIPFLIYCGLPMTEVAGTSASF 188

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
           S  I+              +  P  S+G++   AVL+I P ++    + TKLS++I  + 
Sbjct: 189 SLPISILGTFSLGIFATTESNFP-LSIGYIYWPAVLMIAPFTMFGASIGTKLSHLIPAET 247

Query: 263 LTIGFSMIMFTTSFVF 278
           +   F+  +   S   
Sbjct: 248 MRFIFAWFLLFVSMRM 263



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 45/131 (34%), Gaps = 20/131 (15%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLM--------LFYGASIYKATATSAGVSALI 206
             ++  + G+ +G ++G LG+GGG+     +        + +   ++ A  TS  V    
Sbjct: 6   SAFLLSVLGLSSGLMAGLLGIGGGMVIVPGLFFIFQLMGIPHNLLMHLAMGTSMCVMICT 65

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           A  +                   G +    +L ILP   L   + +  S  +  + L   
Sbjct: 66  ATASTWTHQLK------------GDIRWDFLLKILPGIFLGLMIGSSASQHLSTRLLECI 113

Query: 267 FSMIMFTTSFV 277
           F   +   S  
Sbjct: 114 FGFFLLFVSVK 124



 Score = 35.4 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 16/52 (30%)

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           G I    +            + + +   +    +   FA F L + + ML  
Sbjct: 215 GYIYWPAVLMIAPFTMFGASIGTKLSHLIPAETMRFIFAWFLLFVSMRMLLP 266


>gi|119946559|ref|YP_944239.1| hypothetical protein Ping_2938 [Psychromonas ingrahamii 37]
 gi|119865163|gb|ABM04640.1| hypothetical protein DUF81 [Psychromonas ingrahamii 37]
          Length = 272

 Score =  164 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 129/265 (48%), Gaps = 3/265 (1%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            + ++  I  ++    L+G L+GL GVGGG+++VPVL   FQ++G+     M +A  TSL
Sbjct: 4   SNELLFVILSLMATGCLAGFLAGLLGVGGGIIIVPVLFFVFQVIGVSPETAMPIATATSL 63

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
             +  TS+ S   H + G +++ +LK     + +  +  S++++ ++  +L+  F    +
Sbjct: 64  ATMVFTSLSSIRAHIKRGNVDLPLLKILAPFVIMGVLAGSVIVTQINGLWLSGLFGFIAI 123

Query: 136 LMGILMLKRDRLYC-ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
           +  + M+ R        K P    K +     GFLS  +G+GGG  T   +  +   ++K
Sbjct: 124 IAALNMILRAGAKPLATKLPGTPGKGVMAGTIGFLSVMVGIGGGTLTVPSLTAFSYPMHK 183

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA-VLIILPISILITPLATK 253
           A  T+A V  LIAFP  L  +  G      PP + G VN+ A   +I   ++   P+  +
Sbjct: 184 AVGTAAAVGFLIAFPGALSLLIIGESAADAPPMTYGLVNLLACFFLIPL-TVFFAPIGAR 242

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVF 278
           +S  +  K L   F++ +  T    
Sbjct: 243 VSSYLDAKLLKRIFAISLIITGLRM 267



 Score = 43.1 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 20/123 (16%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME----- 88
           G LS + G+GGG + VP L+          S  MH A+GT+  V    +    +      
Sbjct: 156 GFLSVMVGIGGGTLTVPSLTAF--------SYPMHKAVGTAAAVGFLIAFPGALSLLIIG 207

Query: 89  -------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                     +G +N+      I +      + + + S++D   L + FAI  ++ G+ M
Sbjct: 208 ESAADAPPMTYGLVNLLACFFLIPLTVFFAPIGARVSSYLDAKLLKRIFAISLIITGLRM 267

Query: 142 LKR 144
           L +
Sbjct: 268 LLQ 270


>gi|296136522|ref|YP_003643764.1| protein of unknown function DUF81 [Thiomonas intermedia K12]
 gi|295796644|gb|ADG31434.1| protein of unknown function DUF81 [Thiomonas intermedia K12]
          Length = 268

 Score =  164 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 4/261 (1%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I + ++A   +G L GL G+GGGL++V  LS A   +GI     +HVA+ TS+  I  T 
Sbjct: 5   IAIFLLAGASAGFLGGLLGIGGGLLLVAALSFALPALGIPADEVIHVAVATSMASIVLTF 64

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H R G +     +     + I   + + +   +    L    A FC +M + M 
Sbjct: 65  ISSATAHIRRGGVLWPSWRWLAPGMVIGGFIGAHLAQMLSGPVLRYVIAGFCAVMAVQMA 124

Query: 143 KRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
              R      +   P +      G+  G +S  +G+GGG  T  L++  G    KA ATS
Sbjct: 125 AGKRKKTVPGQEHIPRSPWLLPAGVGIGAVSSVVGIGGGSMTVPLLVALGVQPVKAVATS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNG-LPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 IA  + L  + S       LPP + G+V + A       S+++ P   ++++ I
Sbjct: 185 TVCGLAIALSSALSYMISVHAPAHPLPPGAFGYVFLPAAAATAVASMVLAPYGVRVAHRI 244

Query: 259 GKKYLTIGFSMIMFTTSFVFA 279
               L   FS+ +     + A
Sbjct: 245 SGDALKRVFSIFLIFIGALIA 265



 Score = 39.7 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 13/141 (9%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            +     +     ++ A    G +S + G+GGG + VP+L       G+     +  +  
Sbjct: 131 TVPGQEHIPRSPWLLPAGVGIGAVSSVVGIGGGSMTVPLLVAL----GVQPVKAVATSTV 186

Query: 73  TSLGVIAPTSVMSFMEHR---------RHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
             L +   +++   +              G + +           +       +   +  
Sbjct: 187 CGLAIALSSALSYMISVHAPAHPLPPGAFGYVFLPAAAATAVASMVLAPYGVRVAHRISG 246

Query: 124 SFLNKAFAIFCLLMGILMLKR 144
             L + F+IF + +G L+   
Sbjct: 247 DALKRVFSIFLIFIGALIAFG 267


>gi|294340650|emb|CAZ89042.1| putative Phosphotransferase system, fructose-specific IIC component
           [Thiomonas sp. 3As]
          Length = 269

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 4/261 (1%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I + ++A   +G L GL G+GGGL++V  LS A   +GI     +HVA+ TS+  I  T 
Sbjct: 6   IAIFLLAGASAGFLGGLLGIGGGLLLVAALSFALPALGIPADEVIHVAVATSMASIVLTF 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H R G +     +     + I   + + +   +    L    A FC +M + M 
Sbjct: 66  ISSATAHIRRGGVLWPSWRWLAPGMVIGGFIGAHLAQMLSGPVLRYVIAGFCAVMAVQMA 125

Query: 143 KRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
              R      +   P +      G+  G +S  +G+GGG  T  L++  G    KA ATS
Sbjct: 126 AGKRKKTVPGQEHIPRSPWLLPAGVGIGAVSSVVGIGGGSMTVPLLVALGVQPVKAVATS 185

Query: 200 AGVSALIAFPALLVRIYSGWGLNG-LPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 IA  + L  + S       LPP + G+V + A       S+++ P   ++++ I
Sbjct: 186 TVCGLAIALSSALSYMISVHAPAHPLPPGAFGYVFLPAAAATAVASMVLAPYGVRVAHRI 245

Query: 259 GKKYLTIGFSMIMFTTSFVFA 279
               L   FS+ +     + A
Sbjct: 246 SGDALKRVFSIFLIFIGALIA 266



 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 13/141 (9%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            +     +     ++ A    G +S + G+GGG + VP+L       G+     +  +  
Sbjct: 132 TVPGQEHIPRSPWLLPAGVGIGAVSSVVGIGGGSMTVPLLVAL----GVQPVKAVATSTV 187

Query: 73  TSLGVIAPTSVMSFMEHR---------RHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
             L +   +++   +              G + +           +       +   +  
Sbjct: 188 CGLAIALSSALSYMISVHAPAHPLPPGAFGYVFLPAAAATAVASMVLAPYGVRVAHRISG 247

Query: 124 SFLNKAFAIFCLLMGILMLKR 144
             L + F+IF + +G L+   
Sbjct: 248 DALKRVFSIFLIFIGALIAFG 268


>gi|319785839|ref|YP_004145314.1| hypothetical protein Psesu_0221 [Pseudoxanthomonas suwonensis 11-1]
 gi|317464351|gb|ADV26083.1| protein of unknown function DUF81 [Pseudoxanthomonas suwonensis
           11-1]
          Length = 264

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 5/233 (2%)

Query: 51  VLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPIT 110
            L+    L G+     MH A+ +SL  I  T + S   H + G++    +   +  L + 
Sbjct: 30  ALAWMLPLFGVPQEAAMHAALASSLASIVLTGLSSARSHAKRGSVLWPTVAWMVPGLLLG 89

Query: 111 TVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER----KFPDNYVKYIWGMVT 166
             + S +   +D + L    A++CL+    +                P  +     G   
Sbjct: 90  GWLGSGLAVALDDTVLRWVVAVYCLVAAWQIGFGSTRAPADGSDVAPPRGWPMTAAGGGI 149

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G LS  +G+GGG  T  L+++ G    +A  TS+     IA  +             LP 
Sbjct: 150 GALSAVVGIGGGSMTVPLLVWRGVRPVRAVGTSSACGVAIAIASATGYAVH-APPGALPE 208

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            ++G+V + A L +   S+L  PL T+L++ I    L   F++ +       A
Sbjct: 209 HAIGYVYLPAALGVAMASVLSAPLGTRLAHAISGHALRRVFAVFLLLVGVSVA 261



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 19/125 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +  A    G LS + G+GGG + VP+L            +    A+GTS       ++ S
Sbjct: 142 MTAAGGGIGALSAVVGIGGGSMTVPLLVW--------RGVRPVRAVGTSSACGVAIAIAS 193

Query: 86  FMEH-----------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
              +              G + +           ++  + + +   +    L + FA+F 
Sbjct: 194 ATGYAVHAPPGALPEHAIGYVYLPAALGVAMASVLSAPLGTRLAHAISGHALRRVFAVFL 253

Query: 135 LLMGI 139
           LL+G+
Sbjct: 254 LLVGV 258


>gi|21228951|ref|NP_634873.1| permease [Methanosarcina mazei Go1]
 gi|20907488|gb|AAM32545.1| hypothetical permease [Methanosarcina mazei Go1]
          Length = 270

 Score =  163 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 2/259 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           YI  + +    +G +SGL GVGGG +M PV     Q  G+   I + +A+GTSL VI   
Sbjct: 8   YIVTLFLTGAFTGVISGLLGVGGGFIMFPVQYWLLQENGLHPDIAIRIALGTSLFVILLN 67

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+   ++++R   +  +          + +   S + S++  S L+  F I  ++  +  
Sbjct: 68  SISVTLKYQRKKAVLWRQATLMGIFGSVASFGGSAVASYLPASVLSTTFGIVVIIGAVRT 127

Query: 142 LKRDRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATS 199
            K        +     + YI+ G++ GF SG LG+GGG+    +ML F    + KA  TS
Sbjct: 128 YKTPAAKETEEISTRKLSYIFAGILIGFFSGLLGIGGGVIGIPIMLIFLHFDMLKAVGTS 187

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A V    +F   L  I  GWG  GLPP+SLG++N+   +++             +++++ 
Sbjct: 188 AAVIMFTSFGGSLGYIIHGWGQPGLPPYSLGYINLLNWVLLAIPGFFAARKGADIAHIVN 247

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            +YL   F ++M       
Sbjct: 248 PEYLKHLFVLLMIYVGLEM 266


>gi|289164145|ref|YP_003454283.1| transmembrane protein [Legionella longbeachae NSW150]
 gi|288857318|emb|CBJ11145.1| putative transmembrane protein [Legionella longbeachae NSW150]
          Length = 263

 Score =  163 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 126/258 (48%), Gaps = 3/258 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I + + A  ++G L+ LFG GGG+V+VP+L       GI   + MH+A+GTSL ++   
Sbjct: 1   MISIYLFAGIVTGLLATLFGFGGGIVVVPLLFWLLPFDGIPQELAMHLAVGTSLMLMFIN 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            + +   H     ++M +L+  + ++ +  V  +L+ + +    L  AF I   ++ +  
Sbjct: 61  MIYAAWLHYLKQNMDMILLRKMLPLVALGAVSGALIATILSAKELKYAFLILIFVVLLRN 120

Query: 142 LKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           LK++         K P + + Y     TG ++  LG+GG +     +  YG ++ KA+A 
Sbjct: 121 LKQEFFTDKLTAHKMPTHALLYCVSYFTGTIAALLGIGGSVIIVPFLRHYGLTMTKASAL 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           + G++A       ++ I +G+ +  LPP+S G++   A++ I   SI+   +    S +I
Sbjct: 181 ANGLAAPSGLIGSIIFIAAGFHIPHLPPYSTGYLYWPALINIFLGSIIGAKIGINFSNLI 240

Query: 259 GKKYLTIGFSMIMFTTSF 276
             +     +  ++    F
Sbjct: 241 PDQVYGKIYFFLLLIVIF 258



 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 47/125 (37%), Gaps = 4/125 (3%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPTS 82
            L+   S+ +GT++ L G+GG +++VP L      M    ++   +A  + L G I   +
Sbjct: 139 ALLYCVSYFTGTIAALLGIGGSVIIVPFLRHYGLTMTKASALANGLAAPSGLIGSIIFIA 198

Query: 83  VMSFMEH---RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
               + H      G +    L +      I   +     + +      K +    L++  
Sbjct: 199 AGFHIPHLPPYSTGYLYWPALINIFLGSIIGAKIGINFSNLIPDQVYGKIYFFLLLIVIF 258

Query: 140 LMLKR 144
            M+  
Sbjct: 259 CMMLN 263



 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 12/122 (9%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY----GASIYKATATSAGVSALIAFPALLVRI 215
              G+VTG L+   G GGGI    L+ +     G     A   + G S ++ F  ++   
Sbjct: 6   LFAGIVTGLLATLFGFGGGIVVVPLLFWLLPFDGIPQELAMHLAVGTSLMLMFINMIYAA 65

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +  +    +        ++  +  +LP+  L       ++ ++  K L   F +++F   
Sbjct: 66  WLHYLKQNM--------DMILLRKMLPLVALGAVSGALIATILSAKELKYAFLILIFVVL 117

Query: 276 FV 277
             
Sbjct: 118 LR 119


>gi|254786077|ref|YP_003073506.1| membrane protein [Teredinibacter turnerae T7901]
 gi|237685847|gb|ACR13111.1| membrane protein [Teredinibacter turnerae T7901]
          Length = 272

 Score =  163 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   FQL+GI  +  M VA GTSL +I PTSV S   H + G I+ ++++ W   + +
Sbjct: 35  PVLYFIFQLIGISAATAMTVATGTSLLIIIPTSVSSIRAHHKRGNIDSQLVRLWWPFIVL 94

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE-RKFPDNYVKYIWGMVTGF 168
             V+  +  +          F I  +L+   M+ R          P    + +   V G 
Sbjct: 95  GVVLGVVFATEAGGQVAAIIFGIVAILVAANMMFRANAQPLFSSLPGKLWQSVIAAVIGL 154

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+GGG      +       ++A  T+A    +IA P   + +  G      P  +
Sbjct: 155 VSVVMGIGGGTLGVPTLSACNFPAHRAVGTAAVFGFIIALPGAALLLVYGSTPPDAPLGT 214

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +G VN+    +I+P+++L+ P+  KL  M+    L   F++ +  +    
Sbjct: 215 IGVVNLLGFAVIVPLTVLMAPVGVKLGAMLNDVLLKRTFAVFLCLSGARM 264


>gi|325577726|ref|ZP_08148001.1| permease [Haemophilus parainfluenzae ATCC 33392]
 gi|325160471|gb|EGC72597.1| permease [Haemophilus parainfluenzae ATCC 33392]
          Length = 264

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 73/258 (28%), Positives = 124/258 (48%), Gaps = 1/258 (0%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++ +I L ++   + G L+GLFG+GGGL++VP L     ++G+ + + M  A+GTS   I
Sbjct: 1   MLTFILLCLLVGSVVGFLAGLFGIGGGLIIVPTLVYLLPMVGVPEPLLMSTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T   S   H + G I    +K    ++ I+  ++ L I  +D+    K FA   + + 
Sbjct: 61  VITGFSSAQRHHKLGNIVWSAVKVLAPMIMISVFISGLFIGKLDRDVSAKIFACLVVYLA 120

Query: 139 ILMLKRDRLYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             M+   +    +  P       I G++ G  S A GVGGG F    +   G  + K+  
Sbjct: 121 AKMVISIKKSTGKTKPLTTQASVIGGILIGMASSAAGVGGGGFIVPFLNSRGIDMKKSIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA   AL+    +L  + SGWG   +P +SLG+V + AVL I   S   + L    +  
Sbjct: 181 SSAFCGALLGLSGMLSFMVSGWGNPSMPDYSLGYVYLPAVLGITGTSFFTSKLGATATSK 240

Query: 258 IGKKYLTIGFSMIMFTTS 275
           +    L  GF++++   +
Sbjct: 241 LPVPTLKKGFALLLVAIA 258


>gi|270157464|ref|ZP_06186121.1| putative membrane protein [Legionella longbeachae D-4968]
 gi|269989489|gb|EEZ95743.1| putative membrane protein [Legionella longbeachae D-4968]
          Length = 263

 Score =  162 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 126/258 (48%), Gaps = 3/258 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I + + A  ++G L+ LFG GGG+V+VP+L       GI   + MH+A+GTSL ++   
Sbjct: 1   MIGIYLFAGIVTGLLATLFGFGGGIVVVPLLFWLLPFDGIPQELAMHLAVGTSLMLMFIN 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            + +   H     ++M +L+  + ++ +  V  +L+ + +    L  AF I   ++ +  
Sbjct: 61  MIYAAWLHYLKQNMDMILLRKMLPLVALGAVSGALIATILSAKELKYAFLILIFVVLLRN 120

Query: 142 LKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           LK++         K P + + Y     TG ++  LG+GG +     +  YG ++ KA+A 
Sbjct: 121 LKQEFFTDKLTAHKMPTHALLYCVSYFTGTIAALLGIGGSVIIVPFLRHYGLTMTKASAL 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           + G++A       ++ I +G+ +  LPP+S G++   A++ I   SI+   +    S +I
Sbjct: 181 ANGLAAPSGLIGSIIFIAAGFHIPHLPPYSTGYLYWPALINIFLGSIIGAKIGINFSNLI 240

Query: 259 GKKYLTIGFSMIMFTTSF 276
             +     +  ++    F
Sbjct: 241 PDQVYGKIYFFLLLIVIF 258



 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 47/125 (37%), Gaps = 4/125 (3%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPTS 82
            L+   S+ +GT++ L G+GG +++VP L      M    ++   +A  + L G I   +
Sbjct: 139 ALLYCVSYFTGTIAALLGIGGSVIIVPFLRHYGLTMTKASALANGLAAPSGLIGSIIFIA 198

Query: 83  VMSFMEH---RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
               + H      G +    L +      I   +     + +      K +    L++  
Sbjct: 199 AGFHIPHLPPYSTGYLYWPALINIFLGSIIGAKIGINFSNLIPDQVYGKIYFFLLLIVIF 258

Query: 140 LMLKR 144
            M+  
Sbjct: 259 CMMLN 263



 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 12/122 (9%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY----GASIYKATATSAGVSALIAFPALLVRI 215
              G+VTG L+   G GGGI    L+ +     G     A   + G S ++ F  ++   
Sbjct: 6   LFAGIVTGLLATLFGFGGGIVVVPLLFWLLPFDGIPQELAMHLAVGTSLMLMFINMIYAA 65

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +  +    +        ++  +  +LP+  L       ++ ++  K L   F +++F   
Sbjct: 66  WLHYLKQNM--------DMILLRKMLPLVALGAVSGALIATILSAKELKYAFLILIFVVL 117

Query: 276 FV 277
             
Sbjct: 118 LR 119


>gi|332308166|ref|YP_004436017.1| hypothetical protein Glaag_3822 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332175495|gb|AEE24749.1| protein of unknown function DUF81 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 266

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 2/231 (0%)

Query: 49  VPVLSKAFQ-LMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           VP L       + +  ++ M +A+ TSL  I  T++ S   H + G +    L      +
Sbjct: 34  VPSLLYLLTHYLELPLTVAMPMAIATSLSTIVLTAISSSRAHYKLGNLRTFYLLWTGIGI 93

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            I  ++     + +    L   FA+  +++   M+       +R    + +  + G++TG
Sbjct: 94  SIGAIIGPQFATLISAQSLKTLFAVLVMVIAAQMVFLGNKNAKRDVTQS-LLLVIGVITG 152

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S  +G+GGG      +L+    +  A   +A    +IA       I +GW    LP W
Sbjct: 153 CISSIMGIGGGAIMVPALLWCRVDMRAAIGCAAFSGLVIALFGSASFIVAGWNNTHLPEW 212

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +LG++ + A L I+  S+    +  KLS  +  + L   F+  +   S   
Sbjct: 213 ALGYIYLPATLGIVMTSVFTASIGAKLSRTLNTQLLKKIFAGFLVIVSLRM 263



 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 4/124 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSK----AFQLMGIDDSICMHVAMGTSLGVIAP 80
           L++V   ++G +S + G+GGG +MVP L          +G      + +A+  S   I  
Sbjct: 143 LLLVIGVITGCISSIMGIGGGAIMVPALLWCRVDMRAAIGCAAFSGLVIALFGSASFIVA 202

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
               + +     G I +      +     T  + + +   ++   L K FA F +++ + 
Sbjct: 203 GWNNTHLPEWALGYIYLPATLGIVMTSVFTASIGAKLSRTLNTQLLKKIFAGFLVIVSLR 262

Query: 141 MLKR 144
           ML  
Sbjct: 263 MLLG 266


>gi|307154644|ref|YP_003890028.1| hypothetical protein Cyan7822_4862 [Cyanothece sp. PCC 7822]
 gi|306984872|gb|ADN16753.1| protein of unknown function DUF81 [Cyanothece sp. PCC 7822]
          Length = 266

 Score =  162 bits (410), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 75/245 (30%), Positives = 120/245 (48%), Gaps = 3/245 (1%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
           ++GL G+GGG+V+VP L   FQLM I  SI MH+AMGTS+ V+  T+  S   H+  G I
Sbjct: 20  MAGLLGIGGGMVIVPGLFFIFQLMEIPMSILMHLAMGTSMCVMICTATASTWTHQLKGDI 79

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD 155
               L   +  + +  VV +L+  H+    L   F IF L + + +L + +L  + +   
Sbjct: 80  RWDFLGKILPGIFLGLVVGALVSQHLSTRLLETIFGIFLLFVALRILLKGKLKSQPQSKP 139

Query: 156 NYVKYI--WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
             + +I   GMV G  SG LG+GGG  +   +++ G  + +   TSA  S  I+      
Sbjct: 140 PQLSFINLVGMVIGLKSGLLGIGGGAISIPFLMYCGLPMTQVAGTSASFSLPISIIGTFS 199

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
                      P  + G++   AVL+I P ++    L TKLS+ I  + + + F+  +  
Sbjct: 200 LGLLAASGTDFP-LTTGYIYWPAVLLIAPFTMFGATLGTKLSHTISSEKMRLIFACFLMA 258

Query: 274 TSFVF 278
            S   
Sbjct: 259 VSIRM 263



 Score = 35.4 bits (81), Expect = 9.4,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 16/52 (30%)

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           G I    +            + + +   +    +   FA F + + I ML  
Sbjct: 215 GYIYWPAVLLIAPFTMFGATLGTKLSHTISSEKMRLIFACFLMAVSIRMLLP 266


>gi|56459616|ref|YP_154897.1| permease [Idiomarina loihiensis L2TR]
 gi|56178626|gb|AAV81348.1| Predicted permease [Idiomarina loihiensis L2TR]
          Length = 263

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 104/227 (45%), Gaps = 1/227 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L     ++G+   + +  A+ TSL  I  T+  +   H +HG +    L   +  L +
Sbjct: 33  PLLIYLLPIIGVPPELVVPSAIATSLATICMTTASASRAHAKHGLMEKFWLIRVLPGLSV 92

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
             +  + +++ VD  +L   F+I  + +   M+   +           +  +   + G +
Sbjct: 93  GAMTGAFLVTVVDPDWLKIIFSIVLIALAARMVLPQKTGEPLTSVSKRLVALGSYIIGTI 152

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           SG +G+GGG  T   +      + +A A S+  S +I   ++++ I +GW L+G    +L
Sbjct: 153 SGLVGIGGGALTVPFLSRMRLPVRQAIAISSLGSFVIGCSSVVMFILNGW-LSGRETGAL 211

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           G +N+ A L I   S+L  PL  KL++ +  K L   F+  +   + 
Sbjct: 212 GLINVPAWLGISVASVLFAPLGAKLAHKLPVKQLQRVFAAFLILVAI 258



 Score = 48.5 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 3/123 (2%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVL--SKAFQLMGIDDSICMHVAMGTSLGVI-APT 81
           L+ + S++ GT+SGL G+GGG + VP L   +      I  S      +G S  V+    
Sbjct: 141 LVALGSYIIGTISGLVGIGGGALTVPFLSRMRLPVRQAIAISSLGSFVIGCSSVVMFILN 200

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             +S  E    G IN+           +   + + +   +    L + FA F +L+ I +
Sbjct: 201 GWLSGRETGALGLINVPAWLGISVASVLFAPLGAKLAHKLPVKQLQRVFAAFLILVAIQL 260

Query: 142 LKR 144
           +  
Sbjct: 261 IFN 263


>gi|90577864|ref|ZP_01233675.1| hypothetical protein VAS14_12474 [Vibrio angustum S14]
 gi|90440950|gb|EAS66130.1| hypothetical protein VAS14_12474 [Vibrio angustum S14]
          Length = 269

 Score =  161 bits (409), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 4/233 (1%)

Query: 47  VMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           V+VP+LS       I      + VA+ TSL  I  TS  S + H ++G +   +    + 
Sbjct: 31  VIVPILSIILLHFAILPPEQVVIVAIATSLASILFTSTSSAIAHHKNGNVPWNLAPWIMT 90

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE---RKFPDNYVKYIW 162
            + +  +++  + + +  + +   FA+   L+   M            R  P+NYV    
Sbjct: 91  GVALGALISGFLAALLPGNVVRIIFAVSVALIAFKMFYSSTKKETTTTRNMPNNYVLTFL 150

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
             +TG LS  +G+GGG     L+ F+   + KA   ++    +IA    +  + SG    
Sbjct: 151 TTITGGLSAMIGIGGGALLVPLLTFFSLDMKKAIGCASACGIVIALFGSIGYVSSGISYL 210

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            +     GFV + A+  I+  S    PL  K +  +    +   FS I+   +
Sbjct: 211 SITDGFAGFVYLPALFGIVCTSWFTAPLGAKATNYLPVPIIKKIFSAILLAMA 263


>gi|332532622|ref|ZP_08408498.1| protein of unknown function DUF81 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332037838|gb|EGI74287.1| protein of unknown function DUF81 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 269

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 117/260 (45%), Gaps = 3/260 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIAP 80
            +    +   + G L+GL G+GGGL++VPVLS       +      + +A+ TSL  I  
Sbjct: 7   LVASCALLGCIVGFLAGLLGIGGGLIIVPVLSTLLLSFNVTSADHVLVIAIATSLASILF 66

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS  S + H ++  +   I    +  + +  +++    S + +  L   FAI  + +   
Sbjct: 67  TSTSSALAHHKNDNVPWDIAPWVMSGVALGALISGFAASLIPEQILRTVFAISVVFIAAR 126

Query: 141 MLK--RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           M+   R++   ++  P   +   +  + G LSG +G+GGG     ++ ++   I KA   
Sbjct: 127 MVLSARNKPMSDKPLPAGPILGGFSAIMGGLSGLIGIGGGALIVPMLNYFSVDIKKAIGC 186

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +A    +IA    +  I +GW +  L     GFV + A+  I+  S  + P+  K ++ +
Sbjct: 187 AAACGIVIALFGSIGYISAGWHVTDLEHGFAGFVYLPALFGIVITSWFVAPIGAKATHYL 246

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               +   F++++   +   
Sbjct: 247 PVNTIKKVFAVLLVVIAIKM 266


>gi|71083883|ref|YP_266603.1| hypothetical protein SAR11_1192 [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062996|gb|AAZ21999.1| Domain of unknown function DUF81 [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 254

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 1/231 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L   F  +GID    MH+A+GTS  +I PTS +S + H +   ++  I+K +   + 
Sbjct: 17  VPFLFYIFNSLGIDQQYVMHLAVGTSFAIIIPTSTVSVLTHHKFKAVDFDIVKSYGIFVV 76

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN-YVKYIWGMVTG 167
           +  +  ++  + +    L   FAI   L+ I +L               ++K I G + G
Sbjct: 77  LGVIFGTIFAATLKTKTLVLFFAIVIFLLSIYLLLLKEKEKNITLKIKLHLKIILGFLVG 136

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           F+S  +G+GG +    ++ F+G SI +A  ++A +  LIA    +  + +G  L    P 
Sbjct: 137 FISAPMGIGGAVMNVPILKFFGYSINRAIGSAAAIGFLIALFGAIGFLITGSYLKTNIPL 196

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           S+GF+NI A LI +PI+  +  +  +  + I K  ++  F + +   +  F
Sbjct: 197 SIGFLNIPAFLIFIPITTFMARIGARTVHTIDKNRISKYFGIFLLIIAAKF 247



 Score = 37.0 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 4/121 (3%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVL----SKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I+  FL G +S   G+GG ++ VP+L        + +G   +I   +A+  ++G +   S
Sbjct: 129 IILGFLVGFISAPMGIGGAVMNVPILKFFGYSINRAIGSAAAIGFLIALFGAIGFLITGS 188

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +        G +N+     +I +      + +  +  +DK+ ++K F IF L++    L
Sbjct: 189 YLKTNIPLSIGFLNIPAFLIFIPITTFMARIGARTVHTIDKNRISKYFGIFLLIIAAKFL 248

Query: 143 K 143
            
Sbjct: 249 Y 249


>gi|88798443|ref|ZP_01114028.1| hypothetical protein MED297_08291 [Reinekea sp. MED297]
 gi|88778883|gb|EAR10073.1| hypothetical protein MED297_08291 [Reinekea sp. MED297]
          Length = 274

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL    Q  G+  +  M +A  TSL +I PT++ S   H R G +++++LK W  ++ +
Sbjct: 38  PVLYFLMQGFGVSAASAMAIATSTSLAIIVPTAISSVRAHYRKGNVDVELLKFWGAIILL 97

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR-LYCERKFPDNYVKYIWGMVTGF 168
             +  SL+ + V  +FL   F I  +L+ I ML R          P    + +     G 
Sbjct: 98  AAIFGSLIANAVSGTFLTWMFGIIAVLVSINMLFRSGAPALFPTLPGKPGQALMATSVGG 157

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           LS  +G+GGG     L+  +  + ++A  T+A    LIA P  L  +  G      P  +
Sbjct: 158 LSVMVGIGGGTIGVPLLTSFNVAAHRAVGTAAAFGLLIALPGALTLMVVGETPMDAPVGT 217

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              +N+ A+ +I+P+++L  P+   L   +  K L   F++++F T    
Sbjct: 218 WRLLNLPALALIVPLTVLFAPVGAWLGAKLNAKELKKAFAVVLFFTGTRM 267


>gi|91763047|ref|ZP_01265011.1| hypothetical protein PU1002_00275 [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91717460|gb|EAS84111.1| hypothetical protein PU1002_00275 [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 261

 Score =  158 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 129/254 (50%), Gaps = 1/254 (0%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + + +   G ++GLFG+GGGL+ VP L   F  +GID    MH+A+GTS  +I PTS +S
Sbjct: 1   MALTAIPVGFVAGLFGIGGGLITVPFLFYIFNSLGIDQQYVMHLAVGTSFAIIIPTSTVS 60

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + H +   ++  I+K +   + +  +  ++  + +    L   FAI   L+ I +L   
Sbjct: 61  VLTHHKFKAVDFDIVKSYGIFVVLGVIFGTIFAATLKTKTLVLFFAIVIFLLSIYLLLLK 120

Query: 146 RLYCERKFPDN-YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
                       ++K I G + GF+S  +G+GG +    ++ F+G SI +A  ++A +  
Sbjct: 121 EKEKNITLKIKLHLKIILGFLVGFISAPMGIGGAVMNVPILKFFGYSINRAIGSAAAIGF 180

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           LIA    +  + +G  L    P S+GF+NI A LI +PI+  +  +  +  + I K  ++
Sbjct: 181 LIALFGAIGFLITGSYLKTNIPLSIGFLNIPAFLIFIPITTFMARIGARTVHTIDKNRIS 240

Query: 265 IGFSMIMFTTSFVF 278
             F + +   +  F
Sbjct: 241 KYFGIFLLIIAAKF 254



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 4/121 (3%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVL----SKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I+  FL G +S   G+GG ++ VP+L        + +G   +I   +A+  ++G +   S
Sbjct: 136 IILGFLVGFISAPMGIGGAVMNVPILKFFGYSINRAIGSAAAIGFLIALFGAIGFLITGS 195

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +        G +N+     +I +      + +  +  +DK+ ++K F IF L++    L
Sbjct: 196 YLKTNIPLSIGFLNIPAFLIFIPITTFMARIGARTVHTIDKNRISKYFGIFLLIIAAKFL 255

Query: 143 K 143
            
Sbjct: 256 Y 256


>gi|268324617|emb|CBH38205.1| conserved hypothetical membrane protein [uncultured archaeon]
          Length = 276

 Score =  157 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 3/251 (1%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G   GL GVGG  +MVPV    F  MG    + + +A G++L V+ PT++     H
Sbjct: 14  GIGVGFAEGLLGVGGCFIMVPVTFFLFTEMGYSPDVALMLAFGSNLLVVFPTAISGAWAH 73

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHV-DKSFLNKAFAIFCLLMGILMLKRDRLY 148
            + G +  K+         +  ++ S + S + +++ L   F +   L  + ML      
Sbjct: 74  TKKGAVWWKVGIVLGICGSVGALIGSTIASQLLNEAILKPVFGVVIGLGAVSMLIMKPQK 133

Query: 149 CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG--ASIYKATATSAGVSALI 206
            E    DN +      +   +   +   GG    + +L  G    +++A  TS  +    
Sbjct: 134 IEEDPKDNPLLLAACGLPIGIISGMIGIGGGIITVPVLAMGLKYKMHRAVGTSLSMMIFT 193

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           +F   +  + +G+ +  LPP+S+G+VN+     +   SI +  +  ++++ +  K L   
Sbjct: 194 SFAGSIGYMINGFSVPDLPPFSIGYVNLLVWACLTISSIPVAIIGARIAHRLPAKQLRYI 253

Query: 267 FSMIMFTTSFV 277
           F  +MF  +  
Sbjct: 254 FIAVMFYVALK 264



 Score = 40.1 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 33/103 (32%), Gaps = 12/103 (11%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH------------RRHGTINMKILKDWI 104
            ++ +     MH A+GTSL ++  TS    + +               G +N+ +     
Sbjct: 169 PVLAMGLKYKMHRAVGTSLSMMIFTSFAGSIGYMINGFSVPDLPPFSIGYVNLLVWACLT 228

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
                  ++ + +   +    L   F      + + ++     
Sbjct: 229 ISSIPVAIIGARIAHRLPAKQLRYIFIAVMFYVALKVIGVFDW 271


>gi|121999111|ref|YP_001003898.1| hypothetical protein Hhal_2333 [Halorhodospira halophila SL1]
 gi|121590516|gb|ABM63096.1| protein of unknown function DUF81 [Halorhodospira halophila SL1]
          Length = 288

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 120/243 (49%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + + A  L+G  +GLFGVGGG+V+VPVL   F  +  D ++  H+A+GTSL  +  TS
Sbjct: 30  LLIYLGAGCLAGATAGLFGVGGGIVVVPVLLLVFAALDFDAAVATHLAIGTSLATVVVTS 89

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H +   +++ +       +    V+ +++  ++D + L + F  F LL+ + ML
Sbjct: 90  LGSARSHYQLSAVDVPLFLRLAAGMVGGAVLGTVLAGYLDGAALQRLFGSFLLLVSLYML 149

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +           V    G   G LS  +GV GG  T   +++ G ++++A  TS+  
Sbjct: 150 SGWQPPRRGGGGGTGVLAGVGGGIGTLSAMVGVSGGTVTVPYLVWRGVAMHRAVGTSSAT 209

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
           +  +     L  +  GWG   LP  + G++   A   ++  S+L + LA +L++ +  + 
Sbjct: 210 ALPLGLTGALGYLMVGWGHPQLPSGATGYIYWPAFAGVVAASLLASSLAARLAHRVPARQ 269

Query: 263 LTI 265
           L  
Sbjct: 270 LRR 272



 Score = 36.6 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 25/89 (28%), Gaps = 12/89 (13%)

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
            + + A  TS     + +  +                + L  V++   L +    +    
Sbjct: 72  VATHLAIGTSLATVVVTSLGSA------------RSHYQLSAVDVPLFLRLAAGMVGGAV 119

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L T L+  +    L   F   +   S   
Sbjct: 120 LGTVLAGYLDGAALQRLFGSFLLLVSLYM 148


>gi|325958271|ref|YP_004289737.1| hypothetical protein Metbo_0513 [Methanobacterium sp. AL-21]
 gi|325329703|gb|ADZ08765.1| protein of unknown function DUF81 [Methanobacterium sp. AL-21]
          Length = 268

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/255 (24%), Positives = 117/255 (45%), Gaps = 8/255 (3%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
              + G  SGL GVGGG +MVPV       +G+D +I + VA GTSL VI PT++   + 
Sbjct: 13  TGAMVGFASGLLGVGGGFIMVPVQFFLLTSIGVDPTIAIRVAFGTSLAVILPTAISGTIG 72

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
           H+R   + ++          + +     + +++   +L  AF +   L  + ML      
Sbjct: 73  HKRRNAVLVRPTILMGISGVLASFAGGTLATNIPGDYLKLAFGVLVFLAAVWMLVAKYPD 132

Query: 149 CERKFPDNYVKYIWGMVTGFLS-----GALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
            + K  +  + YI   + G  +          GG +   +L+     ++  A  TS  V 
Sbjct: 133 NDTKPKEGVIPYI---LIGLFAGSLSGLLGIGGGIVLVPILVFLMNFNLRTAIGTSTAVL 189

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
              A   ++  I +G  + G+PP+S+G++N+  ++++  IS  +  L  ++S+ I +K L
Sbjct: 190 VFTAIGGVVSYIINGINVPGIPPYSIGYINLVQLVLLACISTPVAQLGVRVSHNIPEKQL 249

Query: 264 TIGFSMIMFTTSFVF 278
              + ++M   S   
Sbjct: 250 KYIYIVVMIYISLKM 264


>gi|188583433|ref|YP_001926878.1| hypothetical protein Mpop_4234 [Methylobacterium populi BJ001]
 gi|179346931|gb|ACB82343.1| protein of unknown function DUF81 [Methylobacterium populi BJ001]
          Length = 270

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 67/261 (25%), Positives = 125/261 (47%), Gaps = 1/261 (0%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D +V  I +  +   +SG LSGLFG+GG  V +P+    F  +GI+ SI MHVA  TS+ 
Sbjct: 2   DDLVLRIIIFAIVGLVSGFLSGLFGIGGSTVRLPIFIYLFPWVGIEHSILMHVASATSMA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           ++ P+++ +  E    G ++    K W+  L I     ++++ +     L   FA++ LL
Sbjct: 62  LVIPSAITASREQYALGNLDFGFYKTWVVGLFIGVAFGAILLPYSSTEILQSLFAVYILL 121

Query: 137 MGILM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +G+ + + R R     + P    +   G   G ++   G  GG  T  L+   G ++ KA
Sbjct: 122 VGLYIAVGRGRALSAGQPPSGIKRIGLGSFVGLVAAMTGTSGGTLTTPLLNTCGLALEKA 181

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            A ++    +    A +  I +GW    LP +SLG+V++   ++++P  ++  PL   + 
Sbjct: 182 IAIASATGLVTGSIATIGGIITGWNARDLPSYSLGYVDVVIFIVMMPTVMISAPLGVYVG 241

Query: 256 YMIGKKYLTIGFSMIMFTTSF 276
               +  L   ++ ++     
Sbjct: 242 NKFSQTMLERTYAALLILVGA 262



 Score = 35.8 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 20/128 (15%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF--------YGASIYKATATSAGVSALIAFPAL 211
            I G+V+GFLSG  G+GG      + ++        +   ++ A+ATS  +    A  A 
Sbjct: 12  AIVGLVSGFLSGLFGIGGSTVRLPIFIYLFPWVGIEHSILMHVASATSMALVIPSAITAS 71

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
                          ++LG ++ G     +    +       L      + L   F++ +
Sbjct: 72  ------------REQYALGNLDFGFYKTWVVGLFIGVAFGAILLPYSSTEILQSLFAVYI 119

Query: 272 FTTSFVFA 279
                  A
Sbjct: 120 LLVGLYIA 127


>gi|77359698|ref|YP_339273.1| hypothetical protein PSHAa0747 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76874609|emb|CAI85830.1| conserved protein of unknown function ; putative membrane protein
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 269

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 118/260 (45%), Gaps = 3/260 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIAP 80
            +    +   + G L+GL G+GGGL++VPVLS       +      + +A+ TSL  I  
Sbjct: 7   LVASCALLGCVVGFLAGLLGIGGGLIIVPVLSALLLAFNVTAVENVLVIAIATSLASILF 66

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS  S + H ++  +   I    +  + I  +++    S + +  L   FA+  + + + 
Sbjct: 67  TSTSSALAHHKNDNVPWVIAPWVMSGVAIGALISGFAASLIPEQILRTVFAVSVVFIALR 126

Query: 141 MLK--RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           M+   R++   E+  P   +      + G LSG +G+GGG     L+ ++   I KA   
Sbjct: 127 MVLSARNKPLSEKPLPSGPILGSLCAIMGALSGLIGIGGGALIVPLLHYFSVDIKKAIGC 186

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +A    +IAF   +  I +GW +  L     GFV + A+  I+  S  I P+  K ++ +
Sbjct: 187 AAACGIVIAFFGSIGYISAGWQVTDLEHGFAGFVYLPALFGIVITSWFIAPIGAKATHYL 246

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               +   F++++   +   
Sbjct: 247 PVNTIKKVFAVLLVIIAIKM 266


>gi|254496006|ref|ZP_05108909.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
 gi|254354755|gb|EET13387.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
          Length = 268

 Score =  156 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/218 (28%), Positives = 105/218 (48%)

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
           I  +I MHVA GTSL V+  TS  S   H + G I   +       + I T+  ++    
Sbjct: 49  IPMAIAMHVAAGTSLAVMIITSQASLRAHYQLGDIRWSVYNRLWPGIIIGTISGAIAAQW 108

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
           V   +L   FA F L + + ML   ++    K P  ++ ++     GF SG LG+GGG+ 
Sbjct: 109 VPTYWLQIIFAFFLLGVALKMLMDAKITHSEKSPKPWINHLVSFFIGFKSGLLGIGGGLL 168

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
               +++ G  I K  A S+  +  +A    +V + +G+      P++ G+V   AVL++
Sbjct: 169 IIPYLIYCGVEIRKIAAVSSLCTLTVALIGSMVFMVTGYHETVAIPYTTGYVYWPAVLLV 228

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              S +  P+  KL+Y++  + L  GF +I+  T+   
Sbjct: 229 ATFSSVTAPIGAKLNYIVPVQQLKYGFIVILVLTALKM 266


>gi|254786098|ref|YP_003073527.1| hypothetical protein TERTU_2056 [Teredinibacter turnerae T7901]
 gi|237684192|gb|ACR11456.1| conserved hypothetical protein [Teredinibacter turnerae T7901]
          Length = 270

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 96/231 (41%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VPVLS  F   GI     +H+A+ T+   +  TS +S   H R G +  +++K  +  L
Sbjct: 31  IVPVLSSLFNAQGIAPGAEVHLALATAFPCMLVTSAVSTFNHHRQGAVRWRVVKWLLIGL 90

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
              T + +  + + +  +++  FA+F LL  +      +    +         + G   G
Sbjct: 91  FPATYLVAHSVVNWNPVYISIFFALFMLLAALQTFVGWQPTSAQPEIGKKTLVVAGAAIG 150

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +S    VGGG    L + +    +  A  +SA +   IA         +          
Sbjct: 151 GVSAVAAVGGGFLAILFLTYRKIPLKMAIGSSAAMGLCIAISGTWGYATASEQRFTDVSG 210

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            LG+V + A +++   SIL+T +  + ++ +  K L   FS++    S   
Sbjct: 211 VLGYVYLPAFVMVSVFSILLTTVGVRHAHKLPNKILKKIFSVVCVCLSIKM 261



 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 20/129 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++VA    G +S +  VGGG + +  L+           I + +A+G+S  +    ++  
Sbjct: 142 LVVAGAAIGGVSAVAAVGGGFLAILFLTY--------RKIPLKMAIGSSAAMGLCIAISG 193

Query: 86  FMEHRR------------HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
              +               G + +           + T V       +    L K F++ 
Sbjct: 194 TWGYATASEQRFTDVSGVLGYVYLPAFVMVSVFSILLTTVGVRHAHKLPNKILKKIFSVV 253

Query: 134 CLLMGILML 142
           C+ + I ML
Sbjct: 254 CVCLSIKML 262


>gi|240138287|ref|YP_002962759.1| hypothetical protein MexAM1_META1p1633 [Methylobacterium extorquens
           AM1]
 gi|240008256|gb|ACS39482.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
          Length = 270

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 62/253 (24%), Positives = 119/253 (47%), Gaps = 1/253 (0%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D +V  I +  +   +SG +SGLFG+GG  V +P+       +GI+ S+ MHVA  TS+ 
Sbjct: 2   DDLVLRIIIFAIVGLVSGFISGLFGIGGSTVRLPIFIYLLPWVGIEQSVLMHVASATSMA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           ++ P+++ +  +    G +++   K W+  L I   + ++++ H     L   FA++ LL
Sbjct: 62  LVIPSAITATRKQYALGNLDVGFYKTWVIGLFIGVALGAILLPHGSTEILQTLFAVYILL 121

Query: 137 MGILM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +G  +   R R     K P    +       G ++   G  GG  T  ++   G ++ KA
Sbjct: 122 VGFYIAFGRGRFSSRSKPPSGGKRIGIASFVGLVAALTGTSGGTLTTPILSTCGLALEKA 181

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            A ++    +    A +  I SGW     P +SLG+V++   ++++P  ++  P    + 
Sbjct: 182 IAIASATGLVTGSIATIGGILSGWHAPDRPSYSLGYVDLVIFVVMMPTVMISAPWGVSVG 241

Query: 256 YMIGKKYLTIGFS 268
               +  L   ++
Sbjct: 242 EKFSETTLQRTYA 254


>gi|52549977|gb|AAU83826.1| hypothetical protein permease [uncultured archaeon GZfos34A6]
          Length = 276

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 107/251 (42%), Gaps = 3/251 (1%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G   GL GVGG  +MVPV    F  MG    + + +A G++L V+ PT++     H
Sbjct: 14  GIGVGFAEGLLGVGGCFIMVPVTFFLFTEMGYSPDVALMLAFGSNLLVVFPTAISGAWAH 73

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHV-DKSFLNKAFAIFCLLMGILMLKRDRLY 148
            + G +  K          +  ++ S + S + +++ L   F I   L  + ML R    
Sbjct: 74  TKKGAVCWKAGIVLGICGSVGALIGSTISSQLLNEAILAPVFGIVIGLGAVGMLIRKPQE 133

Query: 149 CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG--ASIYKATATSAGVSALI 206
            E    D  +      +   +   +   GG    + +L  G    +++A  TS  +    
Sbjct: 134 IEEDPKDTPLLLAACGLPIGIICGMIGIGGGSITVPVLAMGLKYKMHRAVGTSLSMMLFT 193

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           +F   +  + +G+ +  LPP+S+G+VN+     +   SI +  +  ++++ +  K L   
Sbjct: 194 SFAGSIGYMINGFSVPDLPPFSIGYVNLITWACLAISSIPVAIIGARIAHRLPAKQLRYI 253

Query: 267 FSMIMFTTSFV 277
           F  +MF  +  
Sbjct: 254 FIAVMFYVALK 264



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 32/103 (31%), Gaps = 12/103 (11%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH------------RRHGTINMKILKDWI 104
            ++ +     MH A+GTSL ++  TS    + +               G +N+       
Sbjct: 169 PVLAMGLKYKMHRAVGTSLSMMLFTSFAGSIGYMINGFSVPDLPPFSIGYVNLITWACLA 228

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
                  ++ + +   +    L   F      + + ++     
Sbjct: 229 ISSIPVAIIGARIAHRLPAKQLRYIFIAVMFYVALKVIGVFDW 271


>gi|254785410|ref|YP_003072839.1| membrane protein [Teredinibacter turnerae T7901]
 gi|237686180|gb|ACR13444.1| membrane protein [Teredinibacter turnerae T7901]
          Length = 269

 Score =  155 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 1/230 (0%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   FQ +G+     M +A GTSL +I  TS+ S   H   G +++ +++ W   + +
Sbjct: 34  PVLFFVFQAIGVSSDSAMLIATGTSLVIIIATSISSIRAHHTKGNVDLALVRLWWPFIVL 93

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC-ERKFPDNYVKYIWGMVTGF 168
             +   L+ +H+   F +  F    +L+   ML R        + P    + I  ++ G 
Sbjct: 94  GALSGVLLSTHIGGKFASIVFGCTAILVACNMLFRASSAPLLAQLPGKTFQAILAVIIGG 153

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +S  +G+GGG     L+       ++A  T+A    +IA P   + +         P  +
Sbjct: 154 ISVIMGIGGGTLGVPLLTACNFPAHRAVGTAAAFGFIIAVPGASLLLLLASTPADAPRGT 213

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            GF+N+  V +I+P+S+++ P+  KL  +I    L   F++ +  +    
Sbjct: 214 YGFINLIGVALIMPLSVVMAPVGVKLGSLINGTTLKRIFALFLVLSGLRM 263


>gi|254560829|ref|YP_003067924.1| hypothetical protein METDI2381 [Methylobacterium extorquens DM4]
 gi|254268107|emb|CAX23983.1| hypothetical protein; putative membrane protein [Methylobacterium
           extorquens DM4]
          Length = 270

 Score =  155 bits (392), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 61/253 (24%), Positives = 119/253 (47%), Gaps = 1/253 (0%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D +V  I +  +   +SG +SGLFG+GG  V +P+       +GI  S+ MHVA  TS+ 
Sbjct: 2   DDLVLRIIIFAIVGLVSGFISGLFGIGGSTVRLPIFIYLLPWVGIGQSVLMHVASATSMA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           ++ P+++ +  +    G +++   K W+  L I   + ++++ H     L   FA++ LL
Sbjct: 62  LVIPSAITATRKQYALGNLDVGFYKTWVIGLFIGVALGAILLPHGSTEILQTLFAVYILL 121

Query: 137 MGILM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +G  +   R R     + P +  +       G ++   G  GG  T  ++   G ++ KA
Sbjct: 122 VGFYIAFGRGRFSSRSEPPSDGKRIGIASFVGLVAALTGTSGGTLTTPILSTCGLALEKA 181

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            A ++    +    A +  I SGW     P +SLG+V++   ++++P  ++  P    + 
Sbjct: 182 IAIASATGLVTGSIATIGGILSGWHAPDRPSYSLGYVDLVIFVVMMPTVMISAPWGVSVG 241

Query: 256 YMIGKKYLTIGFS 268
               +  L   ++
Sbjct: 242 EKFSETTLQRTYA 254


>gi|315127382|ref|YP_004069385.1| hypothetical protein PSM_A2320 [Pseudoalteromonas sp. SM9913]
 gi|315015896|gb|ADT69234.1| hypothetical protein PSM_A2320 [Pseudoalteromonas sp. SM9913]
          Length = 269

 Score =  154 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 3/260 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIAP 80
            +    +   + G L+GL G+GGGL++VPVL+       +      + +A+ TSL  I  
Sbjct: 7   LVASCALLGCIVGFLAGLLGIGGGLIIVPVLTSLLLGFNVAAADHVLVIAIATSLASILF 66

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS  S + H ++  +  KI    +  + I  +++    S + +  L   FA+  + + + 
Sbjct: 67  TSTSSALAHHKNDNVPWKIAPWVMSGVAIGALISGFAASFIPEKMLRTVFAVSVVFIAMR 126

Query: 141 MLK--RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           M+   R+++      P   V      + G LSG +G+GGG     ++ ++   I KA   
Sbjct: 127 MVLSARNKVSVGHPMPAGPVLGSISAIMGALSGLIGIGGGALLVPMLHYFSVDIKKAIGC 186

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +A    +IAF   +  + +GW +  L    +GFV + A+L I+  S  I P+  K ++ +
Sbjct: 187 AAACGIVIAFFGSIGYVSAGWQVTDLAHGFMGFVYLPALLGIVVTSWFIAPIGAKATHYL 246

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               +   F+M++   +   
Sbjct: 247 PVNTIKKVFAMLLVIIAIKM 266


>gi|167948520|ref|ZP_02535594.1| hypothetical protein Epers_19116 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 287

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 91/188 (48%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M        VD I L++    + G ++GLFGVG GLV+VPVL  +  L+G+++ + +H+A
Sbjct: 1   MSSFITLFSVDSILLLLFLGAVVGIVAGLFGVGAGLVIVPVLIWSLPLLGVEEGLSVHMA 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL  I  TS+ +   H R G +  +        + +   +  ++   ++   L + F
Sbjct: 61  VGTSLATIVFTSIAAVRAHHRRGAVVWRYFLALTPGILLGAWLGGMIAGGLEGESLRRLF 120

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
           A+F L++   M +   L         +     G+  G +S  +G+GGG  T   +   G 
Sbjct: 121 ALFLLIVAFRMFREVPLETRYGLVSRWQNSGVGLGIGAISALVGIGGGTLTVPYLNGGGV 180

Query: 191 SIYKATAT 198
            + +A AT
Sbjct: 181 EVRRAVAT 188



 Score = 42.4 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 20/130 (15%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY--------GASIYKATATSAGVSALIAF 208
            +    G V G ++G  GVG G+    ++++         G S++ A  TS       + 
Sbjct: 14  LLLLFLGAVVGIVAGLFGVGAGLVIVPVLIWSLPLLGVEEGLSVHMAVGTSLATIVFTSI 73

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            A+                  G V     L + P  +L   L   ++  +  + L   F+
Sbjct: 74  AAV------------RAHHRRGAVVWRYFLALTPGILLGAWLGGMIAGGLEGESLRRLFA 121

Query: 269 MIMFTTSFVF 278
           + +   +F  
Sbjct: 122 LFLLIVAFRM 131


>gi|218529985|ref|YP_002420801.1| hypothetical protein Mchl_2026 [Methylobacterium chloromethanicum
           CM4]
 gi|218522288|gb|ACK82873.1| protein of unknown function DUF81 [Methylobacterium
           chloromethanicum CM4]
          Length = 270

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 63/253 (24%), Positives = 119/253 (47%), Gaps = 1/253 (0%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D +V  I +  +   +SG +SGLFG+GG  V +P+       +GI  S+ MHVA  TS+ 
Sbjct: 2   DDLVLRIIIFAIVGLVSGFISGLFGIGGSTVRLPIFIYLLPWVGIGQSVLMHVASATSMA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           ++ P+++ +  +    G +++   K W+  L I   + ++++ H     L   FA++ LL
Sbjct: 62  LVIPSAITATRKQYALGNLDVGFYKTWVIGLFIGVALGAILLPHGSTEILQTLFAVYILL 121

Query: 137 MGILM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +G  +   R R     K P    +       G ++   G  GG  T  ++   G ++ KA
Sbjct: 122 VGFYIAFGRGRFSSRSKPPSGGKRIGIASFVGLIAALTGTSGGTLTTPILSTCGLALEKA 181

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            A ++    +    A +  I SGW    LP +SLG+V++   ++++P  ++  P    + 
Sbjct: 182 IAIASATGLVTGSIATIGGILSGWHAPDLPSYSLGYVDLVIFVVMMPTVMISAPWGVSVG 241

Query: 256 YMIGKKYLTIGFS 268
               +  L   ++
Sbjct: 242 EKFSETTLQRTYA 254


>gi|90021097|ref|YP_526924.1| hypothetical protein Sde_1450 [Saccharophagus degradans 2-40]
 gi|89950697|gb|ABD80712.1| protein of unknown function DUF81 [Saccharophagus degradans 2-40]
          Length = 286

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 65/275 (23%), Positives = 123/275 (44%), Gaps = 13/275 (4%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
              ++  I +++ A  ++G L+GLFGVGGG+V+VP L   F+ M +  +  + +A+GTSL
Sbjct: 2   PPEILFQILVLLFAGLVAGFLAGLFGVGGGIVIVPALYALFRWMEVSANSAISIAVGTSL 61

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
             + PT+  S   H + G +N  IL      + +  ++ S ++       L   F+   L
Sbjct: 62  VTLLPTACSSLRAHYKLGNVNKNILLWIAPFILMGAIIASSLVVAQFGRLLLFVFSGVLL 121

Query: 136 LMGILMLKRD----------RLYCERKFPDNYVKY---IWGMVTGFLSGALGVGGGIFTN 182
           L+  + + R            +  E       ++    I G + G  S   GVGGG    
Sbjct: 122 LVACITIVRTYRITPAVEHYTINAEPTLKGVLIRVMASIAGFLIGLSSSLAGVGGGATGV 181

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            ++L  G   + A  T++    L+A P+++  +   +     P      V I  ++++  
Sbjct: 182 PVLLGLGLRTHAAIGTASSFGVLVALPSIIALLLFSYSPADAPWGCWKQVYIPGLVVLSF 241

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            ++L+ P   +L   I +K L + F+ ++F     
Sbjct: 242 CTVLVAPYGARLGKKISEKRLKVFFASLLFVVGAR 276


>gi|163851134|ref|YP_001639177.1| hypothetical protein Mext_1707 [Methylobacterium extorquens PA1]
 gi|163662739|gb|ABY30106.1| protein of unknown function DUF81 [Methylobacterium extorquens PA1]
          Length = 270

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/253 (24%), Positives = 117/253 (46%), Gaps = 1/253 (0%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D +V  I +  +   +SG +SGLFG+GG  V +P+       +GI  S  MHVA  TS+ 
Sbjct: 2   DDLVLRIIIFAIVGLVSGFISGLFGIGGSTVRLPIFIYLLPWVGIGQSALMHVASATSMA 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           ++ P+++ +  +    G +++   K W+  L I   + ++++ H     L   FA++ LL
Sbjct: 62  LVIPSAITATRKQYALGNLDVGFYKTWVIGLFIGVALGAILLPHGSTEILQTLFAVYILL 121

Query: 137 MGILM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +G  +   R R     + P    +       G ++   G  GG  T  ++   G ++ KA
Sbjct: 122 VGFYIAFGRGRFSSRSEPPSGSKRIGIASFVGLVAALTGTSGGTLTTPILSTCGLALEKA 181

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            A ++    +    A +  I SGW     P +SLG+V++   ++++P  ++  P    + 
Sbjct: 182 IAIASATGLVTGSIATIGGILSGWHAPDRPSYSLGYVDLVIFVVMMPTVMISAPWGVSVG 241

Query: 256 YMIGKKYLTIGFS 268
               +  L   ++
Sbjct: 242 EKFSETTLQRTYA 254


>gi|119469925|ref|ZP_01612730.1| hypothetical protein ATW7_04784 [Alteromonadales bacterium TW-7]
 gi|119446635|gb|EAW27908.1| hypothetical protein ATW7_04784 [Alteromonadales bacterium TW-7]
          Length = 269

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 113/260 (43%), Gaps = 3/260 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVIAP 80
            +    +   + G L+GL G+GGGL++VP LS    L  +      + +++ TSL  I  
Sbjct: 7   LVACCALLGCIVGFLAGLLGIGGGLIIVPALSTLLILFNVTSAEHVVVISIATSLASILF 66

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS  S + H ++  +   +    +  + +  +++    S + +  L   FA+  + +   
Sbjct: 67  TSTSSALAHHKNDNVPWHVAPWVMAGVAVGALISGFAASLIPEQLLRSVFAVSVVFIAAR 126

Query: 141 MLK--RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           M    R++    +  P   +      + G LSG +G+GGG     ++ ++   I KA   
Sbjct: 127 MALSSRNKPSSTKPLPPGPILGCISAIMGGLSGLIGIGGGALIVPMLNYFSIDIRKAIGC 186

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +A    +IA    +  I +GW +  L     GFV + A+  I+  S  + P   K ++ +
Sbjct: 187 AAVSGIVIALFGSIGYISAGWKVTDLAHGFAGFVYLPALFGIVITSWFVAPYGAKATHYL 246

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               +   F++++   +   
Sbjct: 247 PVNTIKKVFAVLLVVIAIKM 266


>gi|148361182|ref|YP_001252389.1| permease [Legionella pneumophila str. Corby]
 gi|296108517|ref|YP_003620218.1| hypothetical protein lpa_04172 [Legionella pneumophila 2300/99
           Alcoy]
 gi|148282955|gb|ABQ57043.1| permease [Legionella pneumophila str. Corby]
 gi|295650419|gb|ADG26266.1| Hypothetical protein lpa_04172 [Legionella pneumophila 2300/99
           Alcoy]
          Length = 268

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 81/266 (30%), Positives = 133/266 (50%), Gaps = 2/266 (0%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQL-MGIDDSICMHVAMG 72
           +S + +++ +  II+ +F +G ++G  GVGGGL++VP L   FQ    I + I MHVA G
Sbjct: 2   ISGELLINGVIYIIIGAF-AGIMAGALGVGGGLIVVPGLVYIFQHSQVIPEDILMHVAAG 60

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            SL V+  TS  S   H +   I + + K     L + T++ S+M S +    L   F +
Sbjct: 61  CSLAVMIFTSYASLKAHNKMDEILLPLFKKLCPGLVLGTILGSIMASFIPTHLLKIIFGL 120

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           F L + + ML   R+    KFP  ++  +     G +SG LGVGGG+     + + G  +
Sbjct: 121 FLLGVAMKMLLDVRVSHTDKFPGYWLNTLVSSSIGSISGLLGVGGGVIIIPYLTYCGVPV 180

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            K  A S   +  +     ++ + +G        +S+G++   AVL +   S LI P   
Sbjct: 181 RKIAAVSNLGTFAVGLVGTIMFMITGTLDMTKISYSIGYIYWPAVLGVAIPSSLIAPFGA 240

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVF 278
           KL+Y++   YL  GF +I+ TT+   
Sbjct: 241 KLNYLLPVNYLRYGFIVILITTAIHM 266


>gi|88858170|ref|ZP_01132812.1| hypothetical protein PTD2_12309 [Pseudoalteromonas tunicata D2]
 gi|88819787|gb|EAR29600.1| hypothetical protein PTD2_12309 [Pseudoalteromonas tunicata D2]
          Length = 267

 Score =  151 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 110/260 (42%), Gaps = 1/260 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVI 78
           +  I    +   + G L+GL G+GGGL++VP L        +        VA+ TSL  I
Sbjct: 5   ISIITFCALLGCIVGFLAGLLGIGGGLIIVPALCFLLVKFHVLTSDHVFVVAIATSLASI 64

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS  S   H ++  I   I    +  + +  +++  + S +   FL   FAI  + + 
Sbjct: 65  IFTSTSSAFAHHKNHNIPWDIAPAVLVGVAVGALLSGFLASFIPVQFLKSVFAISVVFIA 124

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           + M+        R  P+  +      V G +SG +G+GGG      + F+  ++ KA   
Sbjct: 125 LRMMLSRPSKIVRTLPNRLILTTSTAVLGGVSGLIGIGGGALLVPFLTFFSVNMKKAIGC 184

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           SA    +IA    +  + SG     L    +GFV + A+  I+  S +   L  K ++ +
Sbjct: 185 SAASGIVIAVFGTIGYVSSGLSTTNLDDGFVGFVYLPALFGIVVTSAIFAQLGAKATHYL 244

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               +   F++++   +   
Sbjct: 245 PVGMIKKIFALLLVIVAIRM 264


>gi|262377564|ref|ZP_06070785.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
 gi|262307451|gb|EEY88593.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
          Length = 190

 Score =  151 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 2/175 (1%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +   +V    +G  +GLFGVGGG ++VP+L   F  MG D  + MH+A+GTSL  I  TS
Sbjct: 3   LITFLVIGAFAGFAAGLFGVGGGTIIVPLLFIVFTQMGYDPDVVMHLALGTSLATIVVTS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S M H + G +   + K+    + I     + +   +    L     +F + +   M 
Sbjct: 63  ISSLMAHHKTGAVIWPVFKNLAPPMAIGCFFGAGIAGLISGLHLQIIVGLFLIWVAYTMF 122

Query: 143 --KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
              +  +   +  P +  +   G V G  S   G+GGG  T   +  YG  + KA
Sbjct: 123 TGAKKAIDPTKTLPSSGQQVAAGSVIGVASAIFGIGGGSLTVPYLNRYGVVMQKA 177



 Score = 40.4 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 39/127 (30%), Gaps = 20/127 (15%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY--------GASIYKATATSAGVSALIAFPAL 211
            + G   GF +G  GVGGG     L+              ++ A  TS     + +  +L
Sbjct: 7   LVIGAFAGFAAGLFGVGGGTIIVPLLFIVFTQMGYDPDVVMHLALGTSLATIVVTSISSL 66

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +                 G V       + P   +       ++ +I   +L I   + +
Sbjct: 67  MA------------HHKTGAVIWPVFKNLAPPMAIGCFFGAGIAGLISGLHLQIIVGLFL 114

Query: 272 FTTSFVF 278
              ++  
Sbjct: 115 IWVAYTM 121


>gi|307611743|emb|CBX01448.1| hypothetical protein LPW_31371 [Legionella pneumophila 130b]
          Length = 268

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 81/266 (30%), Positives = 132/266 (49%), Gaps = 2/266 (0%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQL-MGIDDSICMHVAMG 72
           +S + +++ +  II+ +F +G ++G  GVGGGL++VP L   FQ    I + I MHVA G
Sbjct: 2   ISGELLINGVIYIIIGAF-AGIMAGALGVGGGLIVVPGLVYIFQHSQVIPEDILMHVAAG 60

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            SL V+  TS  S   H +   I + + K     L + T++ S+M S +    L   F +
Sbjct: 61  CSLAVMIFTSYASLKAHNKMDEILLPLFKKLCPGLVLGTILGSIMASFIPTHLLKIIFGL 120

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           F L + + ML   R+    KFP  ++  +     G +SG LGVGGG+     + + G  +
Sbjct: 121 FLLGVAMKMLLDVRVSHTDKFPGYWLNTLVSSSIGSISGLLGVGGGVIIIPYLTYCGVPV 180

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            K  A S   +  +     ++ + +G        +S G++   AVL +   S LI P   
Sbjct: 181 RKIAAVSNLGTFAVGLVGTIMFMVTGTLDMTKISYSTGYIYWPAVLGVAIPSSLIAPFGA 240

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVF 278
           KL+Y++   YL  GF +I+ TT+   
Sbjct: 241 KLNYLLPVNYLRYGFIVILITTAIHM 266


>gi|52843065|ref|YP_096864.1| hypothetical protein lpg2870 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52630176|gb|AAU28917.1| hypothetical protein lpg2870 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 268

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 2/266 (0%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQL-MGIDDSICMHVAMG 72
           +S + +++ +  II+ +F +G ++G  GVGGGL++VP L   FQ    I + I MHVA G
Sbjct: 2   ISGELLINGVIYIIIGAF-AGIMAGALGVGGGLIVVPGLVYIFQHSQVIPEDILMHVAAG 60

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            SL V+  TS  S   H +   I + + K     L + T++ S+M S +    L   F +
Sbjct: 61  CSLAVMIFTSYASLKAHNKMDEILLPLFKKLCPGLVLGTILGSIMASFIPTHLLKIIFGL 120

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           F L + + ML   R+    KFP  ++  +     G +SG LGVGGG+     + + G  +
Sbjct: 121 FLLGVAMKMLLDVRVSHTDKFPGYWLNNLVSSSIGSISGLLGVGGGVIIIPYLTYCGVPV 180

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            K  A S   +  +     ++ + +G        +S G++   AVL +   S LI P   
Sbjct: 181 RKIAAVSNLGTFAVGLVGTIMFMITGTLDMAKISYSTGYIYWPAVLGVAIPSSLIAPFGA 240

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVF 278
           KL+Y++   YL  GF +I+ TT    
Sbjct: 241 KLNYLLPVNYLRYGFIVILITTGIHM 266


>gi|54298862|ref|YP_125231.1| hypothetical protein lpp2929 [Legionella pneumophila str. Paris]
 gi|53752647|emb|CAH14082.1| hypothetical protein lpp2929 [Legionella pneumophila str. Paris]
          Length = 268

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 81/266 (30%), Positives = 132/266 (49%), Gaps = 2/266 (0%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQL-MGIDDSICMHVAMG 72
           +S + +++ +  II+ +F +G ++G  GVGGGL++VP L   FQ    I + I MHVA G
Sbjct: 2   ISGELLINGVIYIIIGAF-AGIMAGALGVGGGLIVVPGLVYIFQHSQVIPEDILMHVAAG 60

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            SL V+  TS  S   H +   I + + K     L + T++ S+M S +    L   F +
Sbjct: 61  CSLAVMIFTSYASLKAHNKMDEILLPLFKKLCPGLVLGTILGSIMASFIPTHLLKIIFGL 120

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           F L + + ML   R+    KFP  ++  +     G +SG LGVGGG+     + + G  +
Sbjct: 121 FLLGVAMKMLLDIRVSHTDKFPGYWLNTLVSSSIGSISGLLGVGGGVIIIPYLTYCGVPV 180

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            K  A S   +  +     ++ + +G        +S G++   AVL +   S LI P   
Sbjct: 181 RKIAAVSNLGTFAVGLVGTIMFMITGTLDMTKISYSTGYIYWPAVLGVAIPSSLIAPFGA 240

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVF 278
           KL+Y++   YL  GF +I+ TT+   
Sbjct: 241 KLNYLLPVNYLRYGFIVILITTAIHM 266


>gi|207724941|ref|YP_002255338.1| protein of unknown function duf81 [Ralstonia solanacearum MolK2]
 gi|206590168|emb|CAQ37129.1| protein of unknown function duf81 [Ralstonia solanacearum MolK2]
          Length = 283

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 3/254 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + L ++A   +G  +G+FG+GGG +++P+L   ++  G+D +  + +A GTSL  +A T
Sbjct: 24  MLFLFLLAGLTAGFFAGMFGIGGGAIVIPILVHVYRDAGMDMTEAIRLAFGTSLATMAFT 83

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            + S++ HR+ G ++   L+  +    +  +V  ++ + +   +L    A+     GI +
Sbjct: 84  GLSSYLSHRQRGNVDGAWLRKLMLPSGLGALVGGIIAARIPGGWLALGLALMLGYFGIKL 143

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L +              +++ G ++G      G+GG       +   G S+  A  T+ G
Sbjct: 144 LVQRSDAVVTWPWLERYRHVAGFLSGLTYSLAGMGGASVVTFYLTKAGLSLRSAIGTATG 203

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           V   I+  A+L     G        W  G++++ A+L +   SI+ + L  K +  +   
Sbjct: 204 VILPISVGAILGF---GLTAGAPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPVA 260

Query: 262 YLTIGFSMIMFTTS 275
            L  GF   MF  +
Sbjct: 261 VLRKGFGFFMFVLA 274



 Score = 39.7 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 17/126 (13%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA FLSG    L G+GG  V+    +      G+     +  A+GT+ GVI P SV + +
Sbjct: 163 VAGFLSGLTYSLAGMGGASVV----TFYLTKAGLS----LRSAIGTATGVILPISVGAIL 214

Query: 88  EH---------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                       R G I+++ L        + + +     + +  + L K F  F  ++ 
Sbjct: 215 GFGLTAGAPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPVAVLRKGFGFFMFVLA 274

Query: 139 ILMLKR 144
              L  
Sbjct: 275 GKTLLG 280


>gi|17549483|ref|NP_522823.1| integral membrane transmembrane protein [Ralstonia solanacearum
           GMI1000]
 gi|17431736|emb|CAD18415.1| putative of unknown function duf81; transmembrane protein
           [Ralstonia solanacearum GMI1000]
          Length = 273

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 117/255 (45%), Gaps = 3/255 (1%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + L ++A   +G  +G+FG+GGG +++P+L   ++  G+D +  + +A GTSL  +A 
Sbjct: 13  TMLFLFLLAGLTAGFFAGMFGIGGGAIVIPILVHVYRDAGMDMTEAIRLAFGTSLATMAF 72

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T + S++ HR+ G ++   L+  +    +  +V  ++ + +   +L    A+     GI 
Sbjct: 73  TGLSSYLSHRQRGNVDGAWLRKLMLPSGLGALVGGIIAARIPGGWLALGLALMLGYFGIK 132

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           +L +              +++ G ++G      G+GG       +   G S+  A  T+ 
Sbjct: 133 LLVQRSDAVVAWPWLERYRHVAGFLSGLTYSLAGMGGASVITFYLTKAGLSLRAAIGTAT 192

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
           GV   I+  A+L     G        W  G++++ A+L +   SI+ + L  K +  +  
Sbjct: 193 GVILPISVGAILGF---GLTAGSPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPV 249

Query: 261 KYLTIGFSMIMFTTS 275
             L  GF   MF  +
Sbjct: 250 AVLRKGFGFFMFVLA 264



 Score = 40.8 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 17/126 (13%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA FLSG    L G+GG  V+    +      G+     +  A+GT+ GVI P SV + +
Sbjct: 153 VAGFLSGLTYSLAGMGGASVI----TFYLTKAGLS----LRAAIGTATGVILPISVGAIL 204

Query: 88  EH---------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                       R G I+++ L        + + +     + +  + L K F  F  ++ 
Sbjct: 205 GFGLTAGSPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPVAVLRKGFGFFMFVLA 264

Query: 139 ILMLKR 144
              L  
Sbjct: 265 GKTLLG 270


>gi|83749777|ref|ZP_00946752.1| Hypothetical membrane spanning protein [Ralstonia solanacearum
           UW551]
 gi|207738742|ref|YP_002257135.1| protein of unknown function duf81 [Ralstonia solanacearum IPO1609]
 gi|83723567|gb|EAP70770.1| Hypothetical membrane spanning protein [Ralstonia solanacearum
           UW551]
 gi|206592110|emb|CAQ59016.1| protein of unknown function duf81 [Ralstonia solanacearum IPO1609]
          Length = 283

 Score =  149 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 3/254 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + L ++A   +G  +G+FG+GGG +++P+L   ++  G+D +  + +A GTSL  +A T
Sbjct: 24  MLFLFLLAGLTAGFFAGMFGIGGGAIVIPILVHVYRDAGMDMTEAIRLAFGTSLATMAFT 83

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            + S++ HR+ G ++   L+  +    +  +V  ++ + +   +L    A+     GI +
Sbjct: 84  GLSSYLSHRQRGNVDGAWLRKLMLPSGLGALVGGIIAARIPGGWLALGLALMLGYFGIKL 143

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L +              +++ G ++G      G+GG       +   G S+  A  T+ G
Sbjct: 144 LVQRSDAVVTWPWLERYRHVAGFLSGLTYSLAGMGGASVVTFYLTKAGLSLRSAIGTATG 203

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           V   I+  A+L     G        W  G++++ A+L +   SI+ + L  K +  +   
Sbjct: 204 VILPISVGAILGF---GLTAGAPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPVA 260

Query: 262 YLTIGFSMIMFTTS 275
            L  GF   MF  +
Sbjct: 261 VLRKGFGFFMFVLA 274



 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 17/126 (13%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA FLSG    L G+GG  V+    +      G+     +  A+GT+ GVI P SV + +
Sbjct: 163 VAGFLSGLTYSLAGMGGASVV----TFYLTKAGLS----LRSAIGTATGVILPISVGAIL 214

Query: 88  EH---------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                       R G I+++ L        + + +     + +  + L K F  F  ++ 
Sbjct: 215 GFGLTAGAPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPVAVLRKGFGFFMFVLA 274

Query: 139 ILMLKR 144
              L  
Sbjct: 275 GKTLLG 280


>gi|300697909|ref|YP_003748570.1| hypothetical protein RCFBP_mp30101 [Ralstonia solanacearum
           CFBP2957]
 gi|299074633|emb|CBJ54189.1| conserved membrane protein of unknown function [Ralstonia
           solanacearum CFBP2957]
          Length = 283

 Score =  149 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 117/255 (45%), Gaps = 3/255 (1%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + L ++A   +G  +G+FG+GGG +++P+L   ++  G+D +  + +A GTSL  +A 
Sbjct: 23  TMLFLFLLAGLTAGFFAGMFGIGGGAIVIPILVHVYRDAGMDMTEAIRLAFGTSLATMAF 82

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T + S++ HR+ G ++   L+  +    +  +V  ++ + +   +L    A+     GI 
Sbjct: 83  TGLSSYLSHRQRGNVDGAWLRKLMLPSGLGALVGGIIAARIPGGWLALGLALMLGYFGIK 142

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           +L +              +++ G ++G      G+GG       +   G S+  A  T+ 
Sbjct: 143 LLVQRSDAVVTWPWLERYRHVAGFLSGLTYSLAGMGGASVVTFYLTKAGLSLRSAIGTAT 202

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
           GV   I+  A+L     G        W  G++++ A+L +   SI+ + L  K +  +  
Sbjct: 203 GVILPISVGAILGF---GLTAGAPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPV 259

Query: 261 KYLTIGFSMIMFTTS 275
             L  GF   MF  +
Sbjct: 260 AVLRKGFGFFMFVLA 274



 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 17/126 (13%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA FLSG    L G+GG  V+    +      G+     +  A+GT+ GVI P SV + +
Sbjct: 163 VAGFLSGLTYSLAGMGGASVV----TFYLTKAGLS----LRSAIGTATGVILPISVGAIL 214

Query: 88  EH---------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                       R G I+++ L        + + +     + +  + L K F  F  ++ 
Sbjct: 215 GFGLTAGAPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPVAVLRKGFGFFMFVLA 274

Query: 139 ILMLKR 144
              L  
Sbjct: 275 GKTLLG 280


>gi|54295695|ref|YP_128110.1| hypothetical protein lpl2783 [Legionella pneumophila str. Lens]
 gi|53755527|emb|CAH17026.1| hypothetical protein lpl2783 [Legionella pneumophila str. Lens]
          Length = 268

 Score =  149 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 81/266 (30%), Positives = 132/266 (49%), Gaps = 2/266 (0%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQL-MGIDDSICMHVAMG 72
           +S + +++ +  II+ +F +G ++G  GVGGGL++VP L   FQ    I + I MHVA G
Sbjct: 2   ISGELLINGMIYIIIGAF-AGIMAGALGVGGGLIVVPGLVYIFQHSQVIPEDILMHVAAG 60

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            SL V+  TS  S   H +   I + + K     L + T++ S+M S +    L   F +
Sbjct: 61  CSLAVMIFTSYASLKAHNKMDEILLHLFKKLCPGLVLGTILGSIMASFIPTHLLKIIFGL 120

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           F L + + ML   R+    KFP  ++  +     G +SG LGVGGG+     + + G  +
Sbjct: 121 FLLGLAMKMLLDVRVSHTDKFPGYWLNTLVSSSIGSISGLLGVGGGVIIIPYLTYCGVPV 180

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            K  A S   +  +     ++ + +G        +S G++   AVL +   S LI P   
Sbjct: 181 RKIAAVSNLGTFAVGLVGTIMFMITGTLDMTKISYSTGYIYWPAVLGVAIPSSLIAPFGA 240

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVF 278
           KL+Y++   YL  GF +I+ TT+   
Sbjct: 241 KLNYLLPVNYLRYGFIVILITTAIHM 266


>gi|45358505|ref|NP_988062.1| hypothetical protein MMP0942 [Methanococcus maripaludis S2]
 gi|44921263|emb|CAF30498.1| conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 270

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 6/267 (2%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +     L++V   + G  +G  G+GGG +MVP+L   FQ +GI D   + +A+GTSL V
Sbjct: 2   EIFLIYLLLLVVGCIVGFTTGALGLGGGFLMVPILIYLFQNLGISDDYVVAMAVGTSLSV 61

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS-HVDKSFLNKAFAIFCLL 136
           I  TS+ S   H + G I  K      F   + T V   +++ ++        F I  ++
Sbjct: 62  IFLTSLNSAYSHSKFGNIIWKYSLLLGFSGIMGTFVGVQIVTKYLSGDLHRMLFGIMLII 121

Query: 137 MGILM-LKRDRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLML-FYGASIY 193
           + + M L +     E      Y+  I+ G + G LS   G+GGG     ++  F    I 
Sbjct: 122 LSLNMALSKSDPKLENSQEIKYLPVIFCGFLIGILSSMFGIGGGTIAIPILTIFLKTPIK 181

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPW--SLGFVNIGAVLIILPISILITPLA 251
           K+  TS G+  +I+    L    +   +     +   +G+V++ +VL I  +SI+ +   
Sbjct: 182 KSIGTSLGMMVIISLSGSLGYFTNSVAIPQAYNYLNFIGYVSLTSVLSIGVMSIIFSRYG 241

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            KLS  I    L   F +I+       
Sbjct: 242 AKLSNRINAGLLKKFFGIILMFVGLTM 268



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 59/131 (45%), Gaps = 21/131 (16%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I   FL G LS +FG+GGG + +P+L+   +         +  ++GTSLG++   S+  
Sbjct: 146 VIFCGFLIGILSSMFGIGGGTIAIPILTIFLK-------TPIKKSIGTSLGMMVIISLSG 198

Query: 86  FMEHRRH--------------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
            + +  +              G +++  +     +  I +   + + + ++   L K F 
Sbjct: 199 SLGYFTNSVAIPQAYNYLNFIGYVSLTSVLSIGVMSIIFSRYGAKLSNRINAGLLKKFFG 258

Query: 132 IFCLLMGILML 142
           I  + +G+ M+
Sbjct: 259 IILMFVGLTMI 269


>gi|150402116|ref|YP_001329410.1| hypothetical protein MmarC7_0189 [Methanococcus maripaludis C7]
 gi|150033146|gb|ABR65259.1| protein of unknown function DUF81 [Methanococcus maripaludis C7]
          Length = 270

 Score =  148 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 68/267 (25%), Positives = 119/267 (44%), Gaps = 6/267 (2%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +     L++V   + G  +G  G+GGG +MVP L   FQ +GI D   + +A+GTSL V
Sbjct: 2   EIFLIYLLLVVVGCIVGFTTGALGLGGGFIMVPTLMYIFQNLGISDDHVVAMAVGTSLSV 61

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLL 136
           I  TS+ S   H + G I  +      F   + T V   ++ +++        F +  ++
Sbjct: 62  IFLTSLNSAYSHSKFGNIIWRYSILLGFSGILGTFVGVRIVTNYISGDLHRMLFGVILII 121

Query: 137 MGILM-LKRDRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
           + + M   +     E     NY+  +  G + G LS   G+GGG     ++  +    I 
Sbjct: 122 LSLNMAFNKTNPQVEINKNVNYLPVVLCGFLIGILSSMFGIGGGTIAIPILTLFLKTPIK 181

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPW--SLGFVNIGAVLIILPISILITPLA 251
           ++  TS G+  +I+    L  ++S   +     +   +G+V+I A L I  +SI+ +   
Sbjct: 182 RSIGTSLGMMVIISLSGFLGYLFSPVEIADTYKYLNFIGYVSISAALSIGAMSIIFSRYG 241

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            K+S  I  K L   F +I+       
Sbjct: 242 AKISNNINSKLLKKFFGIILMFVGLTM 268



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 60/131 (45%), Gaps = 21/131 (16%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++  FL G LS +FG+GGG + +P+L+   +         +  ++GTSLG++   S+  
Sbjct: 146 VVLCGFLIGILSSMFGIGGGTIAIPILTLFLK-------TPIKRSIGTSLGMMVIISLSG 198

Query: 86  FMEH--------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
           F+ +                 G +++        +  I +   + + ++++   L K F 
Sbjct: 199 FLGYLFSPVEIADTYKYLNFIGYVSISAALSIGAMSIIFSRYGAKISNNINSKLLKKFFG 258

Query: 132 IFCLLMGILML 142
           I  + +G+ M+
Sbjct: 259 IILMFVGLTMI 269


>gi|88707016|ref|ZP_01104713.1| conserved hypothetical protein, membrane (DUF81) [Congregibacter
           litoralis KT71]
 gi|88698744|gb|EAQ95866.1| conserved hypothetical protein, membrane (DUF81) [Congregibacter
           litoralis KT71]
          Length = 282

 Score =  147 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 14/242 (5%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL + F L G+  +  M +A GTSL VI PT++ S + H R G ++  IL  W   +  
Sbjct: 36  PVLFEVFLLQGVPKASAMLLATGTSLAVIVPTAMSSSLSHWRRGNVDGAILFRWFPAMLA 95

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK-------------FPDN 156
             V  + +   +    L   FA+F L +G L L       + K              P  
Sbjct: 96  AVVFGAWLAPSLPAEPLIGLFAVFALSLGFLKLSGGDGAGDGKLGVEGPDEENIPMLPAA 155

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           Y++       GF+   LGVG G     +M  +   +++A  T+A +  +IA P +LV + 
Sbjct: 156 YLQLGIAAAIGFVCVLLGVGAGTLGVAVMTLFHVPMHRAVGTAAVLGLVIAAPGVLVALC 215

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                 G P +S+G V++   L I P++IL+ PL  ++   +  + L   F+  +     
Sbjct: 216 H-VVPAGAPVYSIGHVSVPGFLSIAPLAILMAPLGVRIGAALSARRLQQLFAGFLLAVGL 274

Query: 277 VF 278
             
Sbjct: 275 RM 276



 Score = 38.5 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 19/129 (14%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +  +   G +  L GVG G + V V++           + MH A+GT+  +    +    
Sbjct: 159 LGIAAAIGFVCVLLGVGAGTLGVAVMTLF--------HVPMHRAVGTAAVLGLVIAAPGV 210

Query: 87  MEHRRH-----------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
           +    H           G +++        +  +   +   + + +    L + FA F L
Sbjct: 211 LVALCHVVPAGAPVYSIGHVSVPGFLSIAPLAILMAPLGVRIGAALSARRLQQLFAGFLL 270

Query: 136 LMGILMLKR 144
            +G+ ML R
Sbjct: 271 AVGLRMLSR 279


>gi|300694277|ref|YP_003750250.1| hypothetical protein RPSI07_mp1300 [Ralstonia solanacearum PSI07]
 gi|299076314|emb|CBJ35627.1| conserved membrane protein of unknown function [Ralstonia
           solanacearum PSI07]
          Length = 260

 Score =  147 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 3/254 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + L ++A   +G  +G+FG+GGG +++P+L   ++  G+D +  + +A GTSL  +A T
Sbjct: 1   MLFLFLLAGLTAGFFAGMFGIGGGAIVIPILVHVYRDAGMDMTEAIRLAFGTSLATMAFT 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            + S++ HR+ G ++   L+  +    +  +V  ++ + +   +L    A+     GI +
Sbjct: 61  GLSSYLSHRQRGNVDSAWLRKLMLPSGLGALVGGIIAARIPGGWLALGLALMLGYFGIKL 120

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L +              +++ G ++G      G+GG       +   G S+  A  T+ G
Sbjct: 121 LVQRSDAVVTWPWLERFRHVAGFLSGLTYSLAGMGGASVVTFYLTKAGLSLRSAIGTATG 180

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           V   I+  A+L     G        W  G++++ A+L +   SI+ + L  K +  +   
Sbjct: 181 VILPISVGAILGF---GLTAGSPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPVA 237

Query: 262 YLTIGFSMIMFTTS 275
            L  GF   MF  +
Sbjct: 238 VLRKGFGFFMFVLA 251



 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 17/126 (13%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA FLSG    L G+GG  V+    +      G+     +  A+GT+ GVI P SV + +
Sbjct: 140 VAGFLSGLTYSLAGMGGASVV----TFYLTKAGLS----LRSAIGTATGVILPISVGAIL 191

Query: 88  EH---------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                       R G I+++ L        + + +     + +  + L K F  F  ++ 
Sbjct: 192 GFGLTAGSPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPVAVLRKGFGFFMFVLA 251

Query: 139 ILMLKR 144
              L  
Sbjct: 252 GKTLLS 257


>gi|150403383|ref|YP_001330677.1| hypothetical protein MmarC7_1464 [Methanococcus maripaludis C7]
 gi|150034413|gb|ABR66526.1| protein of unknown function DUF81 [Methanococcus maripaludis C7]
          Length = 274

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 68/259 (26%), Positives = 125/259 (48%), Gaps = 2/259 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++ +++V     G  +GL G+GG  +M+P+       MGID +I + VA GT+L V+ PT
Sbjct: 5   FMIILLVTGIFVGLFAGLLGIGGCFIMIPIQYWILTAMGIDPTIAIRVAFGTNLMVVLPT 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            +   ++H + G +          +  I     + + S++  + L   F +  L+  + M
Sbjct: 65  ILSGVLKHHKKGIVLWNQAITLGVIGAIGGFGGAYVASYLSGTILKTMFGLTMLIGALRM 124

Query: 142 LKRDRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATS 199
           +    +  E +   N + YI+ G++ GF++G +G+GGG+    +ML F   ++++A  TS
Sbjct: 125 ITAKPIRVEGEPNKNTLTYIFLGIIIGFVTGLIGIGGGVLVIPIMLIFLNFNMHEAIGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           + +    +  A L  +  G G  GLPP+S+G+ NI    ++   SI +       ++ I 
Sbjct: 185 SAMIMFTSLGAGLAYMLLGLGQAGLPPYSIGYFNILQWGLLAATSIPMARFGAHFAHKIP 244

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            K L   F  IM       
Sbjct: 245 AKSLMTLFIAIMAYMGLKM 263


>gi|219850938|ref|YP_002465370.1| protein of unknown function DUF81 [Methanosphaerula palustris
           E1-9c]
 gi|219545197|gb|ACL15647.1| protein of unknown function DUF81 [Methanosphaerula palustris
           E1-9c]
          Length = 277

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 70/246 (28%), Positives = 112/246 (45%), Gaps = 3/246 (1%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
            SGLFGVGGG ++VP+        G+   + + ++  TSL VI PT+V     H     I
Sbjct: 21  ASGLFGVGGGFILVPIQYWLLTASGLSADLAIRISFATSLAVILPTAVSGTYAHHCRRCI 80

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK--F 153
           +   +        + + + +L+ +H+    L   FA+  +L    M   D   CE     
Sbjct: 81  HWDAVVWMGVTAAVVSYLGALLATHLPARPLEVIFAVVLILGAFRMYFADLPSCEIASVV 140

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALL 212
                  +WG+  GF+SG LG+GGGI    +M +F    I+ A  TS  +    A   L+
Sbjct: 141 NSRRTYLLWGIPVGFISGLLGIGGGILMVPVMVVFLRFPIHHAIGTSTPIILFTAAGGLI 200

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             I +G G+ GLPP+SLG+VN+   LI+   +I +  +   L++ +    L      +M 
Sbjct: 201 SYIINGIGVAGLPPYSLGYVNLINALILAVATIPMAQVGAWLAHRVSGLQLRGALVFVMC 260

Query: 273 TTSFVF 278
                 
Sbjct: 261 FFGLKM 266


>gi|299069665|emb|CBJ40938.1| conserved membrane protein of unknown function [Ralstonia
           solanacearum CMR15]
          Length = 260

 Score =  145 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 3/254 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + L ++A   +G  +G+FG+GGG +++P+L   ++  G+D +  + +A GTSL  +A T
Sbjct: 1   MLFLFLLAGLTAGFFAGMFGIGGGAIVIPILVHVYRDAGMDMTEAIRLAFGTSLATMAFT 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            + S++ HR+ G ++   L+  +    +  +V  ++ + +   +L    A+     GI +
Sbjct: 61  GLSSYLSHRQRGNVDGAWLRKLMLPSGLGALVGGIIAARIPGGWLALGLALMLGYFGIKL 120

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L +              +++ G ++G      G+GG       +   G S+  A  T+ G
Sbjct: 121 LVQRSDAVIAWPWLERYRHVAGFLSGLTYSLAGMGGASVITFYLTKAGLSLRAAIGTATG 180

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           V   I+  A+L     G        W  G++++ A+L +   SI+ + L  K +  +   
Sbjct: 181 VILPISVGAILGF---GLTAGSPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPVA 237

Query: 262 YLTIGFSMIMFTTS 275
            L  GF   MF  +
Sbjct: 238 VLRKGFGFFMFVLA 251



 Score = 39.3 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 17/126 (13%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA FLSG    L G+GG  V+    +      G+     +  A+GT+ GVI P SV + +
Sbjct: 140 VAGFLSGLTYSLAGMGGASVI----TFYLTKAGLS----LRAAIGTATGVILPISVGAIL 191

Query: 88  EH---------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                       R G I+++ L        + + +     + +  + L K F  F  ++ 
Sbjct: 192 GFGLTAGSPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPVAVLRKGFGFFMFVLA 251

Query: 139 ILMLKR 144
              L  
Sbjct: 252 GKTLLG 257


>gi|20090528|ref|NP_616603.1| integral membrane protein [Methanosarcina acetivorans C2A]
 gi|19915555|gb|AAM05083.1| integral membrane protein [Methanosarcina acetivorans C2A]
          Length = 272

 Score =  145 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 127/259 (49%), Gaps = 2/259 (0%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y+ ++I     +G +SGL G+GGG +M PV     Q  G+D  + +  A+GTSL VI   
Sbjct: 10  YLGVLIFTGAFAGIISGLLGIGGGFIMSPVQYWLLQETGMDPDLALRAALGTSLFVILIN 69

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +++   ++ +   +  K          I++   + + S++  S L+  F +  +L  +  
Sbjct: 70  AIIVTHKYHKKQAVLWKPALIMGVSGLISSFGGAAVASYLPASTLSTIFGVVIILGALKT 129

Query: 142 LKRDRLYCERKFPDNYVKYIWGMV-TGFLSGALGVGGGIFTNLLML-FYGASIYKATATS 199
                +  + K   N V YI+G +  GF SG LG+GGG+    +ML      + KA  TS
Sbjct: 130 YTTSAVKEKEKIRTNPVFYIFGGILIGFFSGLLGIGGGVVGIPVMLILLHFDMRKAVGTS 189

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A +    +F   +  I +GWG  GLPP+SLG++N+   ++++   +L      ++ +++ 
Sbjct: 190 AAIMLFTSFGGSVGYIINGWGQAGLPPYSLGYINLLNWILLVVPGLLAARTGAEIGHLVN 249

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            +YL   F ++M       
Sbjct: 250 PEYLKHFFVLLMVYVGLEM 268



 Score = 36.6 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 19/131 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              I    L G  SGL G+GGG+V +PV+              M  A+GTS  ++  TS 
Sbjct: 146 VFYIFGGILIGFFSGLLGIGGGVVGIPVMLILLHFD-------MRKAVGTSAAIMLFTSF 198

Query: 84  MSFMEH------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
              + +               G IN+      +    +     + +   V+  +L   F 
Sbjct: 199 GGSVGYIINGWGQAGLPPYSLGYINLLNWILLVVPGLLAARTGAEIGHLVNPEYLKHFFV 258

Query: 132 IFCLLMGILML 142
           +  + +G+ M+
Sbjct: 259 LLMVYVGLEMI 269


>gi|134045788|ref|YP_001097274.1| hypothetical protein MmarC5_0749 [Methanococcus maripaludis C5]
 gi|132663413|gb|ABO35059.1| protein of unknown function DUF81 [Methanococcus maripaludis C5]
          Length = 270

 Score =  145 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 6/267 (2%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +      ++V   + G  +G  G+GGG +MVP L   FQ +GI D   + +A+GTSL V
Sbjct: 2   EIYLIYLFLLVVGCIVGFTTGALGLGGGFIMVPTLIYIFQNLGISDDYVVAMAVGTSLSV 61

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLL 136
           I  TS+ S   H ++G I  K      F   + T     ++ +++        F I  ++
Sbjct: 62  IFLTSLNSAYSHSKYGNIIWKYSLLLGFSGILGTFAGVKIVTNYISGDLHRILFGIMLII 121

Query: 137 MGILM-LKRDRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLML-FYGASIY 193
           + + M   +     E     NY+  +  G + G LS   G+GGG     ++  F    I 
Sbjct: 122 LSLNMAFNKTNPKIESNQNVNYLPVLLCGFLIGVLSSMFGIGGGTIAIPILTIFLKTPIK 181

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPW--SLGFVNIGAVLIILPISILITPLA 251
           K+  TS G+  +I+    L  + S   + G   +   +G+V++ A L I  +S++ +   
Sbjct: 182 KSIGTSLGMMVIISLSGFLGYLLSSVEIVGSYKYLNFIGYVSVSAALSIGVMSLIFSRYG 241

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            K+S  I    L   F +I+       
Sbjct: 242 AKISNNINSGVLKKFFGIILMFVGLTM 268



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 66/143 (46%), Gaps = 22/143 (15%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  +  V+Y+ +++   FL G LS +FG+GGG + +P+L+   +         +  ++GT
Sbjct: 135 IESNQNVNYLPVLLC-GFLIGVLSSMFGIGGGTIAIPILTIFLK-------TPIKKSIGT 186

Query: 74  SLGVIAPTSVMSFMEHRRH--------------GTINMKILKDWIFVLPITTVVTSLMIS 119
           SLG++   S+  F+ +                 G +++        +  I +   + + +
Sbjct: 187 SLGMMVIISLSGFLGYLLSSVEIVGSYKYLNFIGYVSVSAALSIGVMSLIFSRYGAKISN 246

Query: 120 HVDKSFLNKAFAIFCLLMGILML 142
           +++   L K F I  + +G+ M+
Sbjct: 247 NINSGVLKKFFGIILMFVGLTMI 269


>gi|153848085|ref|ZP_01993972.1| choline dehydrogenase [Vibrio parahaemolyticus AQ3810]
 gi|149744694|gb|EDM56162.1| choline dehydrogenase [Vibrio parahaemolyticus AQ3810]
          Length = 216

 Score =  145 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 65/133 (48%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           + MH+A+ TSL  I  TS  S + H + G ++M ++K  +  + I   V + +   +   
Sbjct: 1   MSMHMALATSLASIIVTSGSSALNHLKLGNVDMFVVKWLMPGVVIGGFVGANIAEWIPTH 60

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
           +L K F +  L + + M +  ++  E+  P + V  ++G   G +S   G+GGG  +   
Sbjct: 61  YLPKVFGVIVLCLAVQMFRSIKVKSEKPMPSSPVTMMYGTGIGVVSSLAGIGGGSLSVPF 120

Query: 185 MLFYGASIYKATA 197
           +  +G  + KA  
Sbjct: 121 LNKHGVEMRKAVG 133


>gi|160872382|ref|ZP_02062514.1| putative membrane protein [Rickettsiella grylli]
 gi|159121181|gb|EDP46519.1| putative membrane protein [Rickettsiella grylli]
          Length = 262

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 2/230 (0%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L   F    I  S+ MH+A  T+L  I  T++++    +R  +IN  + +  +  + 
Sbjct: 28  VPGLLAIFSHTDIPQSLQMHMATSTALTSIIFTALIAVYHQQRSFSINWYLFRQLVPGMT 87

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF--PDNYVKYIWGMVT 166
           +  +  +L+   +    L   F++F   +   +        +++      + K   G   
Sbjct: 88  VGIITGALLALLLSTKTLKLLFSLFLFSVAFKLYFHRSPRIKKEIIVLTPFKKGYIGFFI 147

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G +SG LG+GGG     + L  G S + A ATS+    L+A    +    +GW  + LP 
Sbjct: 148 GIISGMLGLGGGAIAVPVFLRLGLSTHAAIATSSACVLLLAILGAITFTLTGWHASNLPV 207

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            SLGFV   AV+ I   S+L  P+ TKL   +    L   F++ +F    
Sbjct: 208 GSLGFVYWPAVVGISIGSVLFVPIGTKLGKRVAGNILRRFFALFLFVLGI 257



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 20/125 (16%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
            F  G +SG+ G+GGG + VPV  +          +  H A+ TS   +   +++  +  
Sbjct: 144 GFFIGIISGMLGLGGGAIAVPVFLRL--------GLSTHAAIATSSACVLLLAILGAITF 195

Query: 90  R------------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                          G +    +        +   + + +   V  + L + FA+F  ++
Sbjct: 196 TLTGWHASNLPVGSLGFVYWPAVVGISIGSVLFVPIGTKLGKRVAGNILRRFFALFLFVL 255

Query: 138 GILML 142
           GI +L
Sbjct: 256 GITLL 260


>gi|52550366|gb|AAU84215.1| permease [uncultured archaeon GZfos3D4]
          Length = 275

 Score =  144 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 56/262 (21%), Positives = 113/262 (43%), Gaps = 2/262 (0%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++  I  + +     G   GL G GG L+M PV    +  MG+   + + V +GTS+ V
Sbjct: 2   DLITAIIALTITGVGVGFGIGLLGFGGCLIMTPVQYWVYIAMGVPLDVAIKVVLGTSMFV 61

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           + PT++     H + G +  K             ++ + + +H+  + L   F +  L  
Sbjct: 62  LLPTAISGAYGHLKKGAVWWKAGIVLGVAEAFGALIGATIAAHLPGNVLCVTFGLAILAG 121

Query: 138 GILMLKRDRLYCERKFPDNYVKY-IWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKA 195
           G+ ML         +  D+ + + IWG   G ++G +G GGG+    +M+      +++A
Sbjct: 122 GVQMLIAKPPAIMNEPKDSPLLWVIWGFPIGIVAGIVGTGGGVMMIPVMVLVLKFRMHQA 181

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T   +    +    +  + +G G+ GLP  S+G+VN+ + L +   S+ +  +    +
Sbjct: 182 VGTMTALMIFASIGGTIGYLINGLGVIGLPVHSIGYVNLISWLCLAATSVSMAQVGVWSA 241

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
           + +  + L      +M      
Sbjct: 242 HKLPARELKYVCIAVMSYVGLK 263


>gi|56965825|ref|YP_177559.1| hypothetical protein ABC4067 [Bacillus clausii KSM-K16]
 gi|56912071|dbj|BAD66598.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 267

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/265 (23%), Positives = 107/265 (40%), Gaps = 6/265 (2%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  + L  +   L G LS LFG GGG V+VPVL        I     MH A+GTSL V+
Sbjct: 1   MLISVVLYSLIGILIGILSSLFGFGGGFVVVPVLVAFLPDS-IPPDYLMHTAVGTSLAVM 59

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              S  S   H + G +   + K  +F + I +++  +   +++   L  AF    L + 
Sbjct: 60  IINSFNSTFNHAKKGNVKWVVFKGMVFYIAIGSLIGGVSAVYINSDILKFAFIGLLLYVI 119

Query: 139 ILMLKRDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
           +  L +       +      P    +   G+  G +S  LGVGG + T       G  + 
Sbjct: 120 VSNLLKKTFTNHVEDQDFRMPSRKSRGPVGVGIGLISTMLGVGGSVMTIPYFRKQGMRML 179

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A A +  +   IA       + +G  +  +P  +LGF+ I A+        +  PL   
Sbjct: 180 NAVALATPLGLPIAIVGAFTFLVTGLQIEDMPGSTLGFIFIPALCGFTLGGFIGVPLGRS 239

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVF 278
            +  I     +  + +++     + 
Sbjct: 240 WAQKIPDAVYSKVYLILLVIVVIMM 264


>gi|159906095|ref|YP_001549757.1| hypothetical protein MmarC6_1713 [Methanococcus maripaludis C6]
 gi|159887588|gb|ABX02525.1| protein of unknown function DUF81 [Methanococcus maripaludis C6]
          Length = 270

 Score =  143 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 6/255 (2%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             + G  +G  G+GGG +MVP L   FQ +GI D   + +A+GTSL VI  TS+ S   H
Sbjct: 14  GCIVGFTTGALGLGGGFIMVPTLIYIFQNLGISDDHVVAMAVGTSLSVIFLTSLNSAYSH 73

Query: 90  RRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMGILM-LKRDRL 147
            + G I  K      F   I T     ++ +++        F I  +++ + M   +   
Sbjct: 74  SKFGNIIWKYSLLLGFSGIIGTFAGVRIVTNYISGDIHRMLFGIMLIILSLNMAFNKTNP 133

Query: 148 YCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSAL 205
             E     NY+  I  G + G LS   G+GGG     ++  +    I K+  TS G+  +
Sbjct: 134 KIESSQNVNYLPVILCGFLIGVLSSMFGIGGGTIAIPILTLFLKTPIKKSIGTSLGMMVI 193

Query: 206 IAFPALLVRIYSGWGLNGLPPW--SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           I+    L  + S   + G   +   +G+V++ + + I  +S++ +    K+S  I    L
Sbjct: 194 ISLSGFLGYLLSPVEIAGSYKYLNFIGYVSVTSAVSIGVMSLIFSRYGAKISNNINSSVL 253

Query: 264 TIGFSMIMFTTSFVF 278
              F +I+       
Sbjct: 254 KKFFGIILMFVGLTM 268



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 62/131 (47%), Gaps = 21/131 (16%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I+  FL G LS +FG+GGG + +P+L+   +         +  ++GTSLG++   S+  
Sbjct: 146 VILCGFLIGVLSSMFGIGGGTIAIPILTLFLK-------TPIKKSIGTSLGMMVIISLSG 198

Query: 86  FMEH----------RRHGTINMKILKDWIFVLPITTVV----TSLMISHVDKSFLNKAFA 131
           F+ +           ++      +       + + +++     + + ++++ S L K F 
Sbjct: 199 FLGYLLSPVEIAGSYKYLNFIGYVSVTSAVSIGVMSLIFSRYGAKISNNINSSVLKKFFG 258

Query: 132 IFCLLMGILML 142
           I  + +G+ M+
Sbjct: 259 IILMFVGLTMI 269


>gi|37528316|ref|NP_931661.1| hypothetical protein plu4495 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787754|emb|CAE16867.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 264

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 55/259 (21%), Positives = 114/259 (44%), Gaps = 6/259 (2%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            LII+++F    LSGLFG G GL+  P +         + S  M  ++ T +  +  + +
Sbjct: 5   ILIIISAFAGSILSGLFGGGAGLIFTPTIYLFLSYANPNSSYIMQTSITTMIASLMISGL 64

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI---- 139
           ++ ++H ++  I+  +LK    ++ I +++    ++ V    +   F++  L++ I    
Sbjct: 65  VAIVKHHKYNHIDWNVLKWSAPLIIIGSILGCFTMTVVSSRSVIYVFSLATLILAIRSTQ 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            ++   +     +      +YI   + G +S   G     F        G  I K+  T+
Sbjct: 125 KLISNTQQNNTNRDLGWSFRYIGCFLLGLISTLSGA--ASFVVPYYESIGLDIKKSIGTT 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             V  L +   L+  I  G   N LPP ++GF+N   + + +  +I    L  KL+  + 
Sbjct: 183 TVVVWLYSVFVLIFMISLGLNKNNLPPGNIGFLNYNYLWLFIIPTIPGALLGAKLANTLP 242

Query: 260 KKYLTIGFSMIMFTTSFVF 278
           ++ L I F+++++      
Sbjct: 243 ERKLRIAFTVLLYFIGSSM 261


>gi|297620756|ref|YP_003708893.1| hypothetical protein wcw_0516 [Waddlia chondrophila WSU 86-1044]
 gi|297376057|gb|ADI37887.1| putative membrane protein [Waddlia chondrophila WSU 86-1044]
          Length = 268

 Score =  138 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 66/267 (24%), Positives = 111/267 (41%), Gaps = 9/267 (3%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +++Y+ L ++          L   GG    VP     F +     +  +HVA+GTSLGV
Sbjct: 1   MIIEYLALSLIGIIAGLLGGLLGIGGGIF-TVPAFLFFFHVFEFPATYTIHVAIGTSLGV 59

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +  T++ S   H     I    L+ +   +   TV  +L+   +    L   F+ +    
Sbjct: 60  MIFTAISSSGAHFLKKGIQWDYLRYYAPGIICGTVFGALIAHTLPNRKLVTLFSTYIFCF 119

Query: 138 GILMLK-------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
           GI  +          +    +K P        G++ G +   LGVGG   T   +  +  
Sbjct: 120 GIYFIYTAFKKENPYQFKDHKKPPRAITTGGVGLIGGTICSILGVGGAPITIPFLTSHHV 179

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            +  A +TSA VS L+     L  +Y G G + +   SLG++ +  +LI    S+L  P 
Sbjct: 180 QLKHAISTSAFVSLLVGTVGTLSYLYFGLG-SQVSNGSLGYLYLPGMLIAGLSSVLSAPF 238

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              L+YM+  + L   F + +   SFV
Sbjct: 239 GANLAYMLPTRILRAIFGIFLVIVSFV 265


>gi|226942384|ref|YP_002797457.1| hypothetical protein Avin_02210 [Azotobacter vinelandii DJ]
 gi|226717311|gb|ACO76482.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
          Length = 267

 Score =  138 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 98/237 (41%), Gaps = 5/237 (2%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           L+ VP+L  A  + G D      VA+ TS+ V++  SV S   H + G ++  I++  + 
Sbjct: 30  LITVPLLIMALPMFGFDPEHAPLVALATSMAVVSVGSVSSVFSHNKLGNVDWSIVRIVVP 89

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI---W 162
              I   + SL I     + L   F IF  ++ + ML   +        D    ++    
Sbjct: 90  ASLIGVGLGSLSIDLFSGTLLKWLFCIFLSIIAVRMLLPTKKKTANDAIDTTAPWVYRSA 149

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           G + G     +G GGG+F    +   G ++ +A ATS  +   +   A +  +++     
Sbjct: 150 GGLIGIAGSLIGAGGGVFMVPFLNRIGHAMPRAVATSTTIGLPVTVFAAI--VHASQSSP 207

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                 LG + + A + +   S+L  PL  + S  +  + L   F+ ++       A
Sbjct: 208 PGDSAMLGHIYLPAFIGLGLGSVLTAPLGARFSSRVPAELLKRVFAWLLIALVVKLA 264



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 44/126 (34%), Gaps = 18/126 (14%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A  L G    L G GGG+ MVP L++            M  A+ TS  +  P +V + + 
Sbjct: 149 AGGLIGIAGSLIGAGGGVFMVPFLNRI--------GHAMPRAVATSTTIGLPVTVFAAIV 200

Query: 89  HRRH----------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           H             G I +           +T  + +   S V    L + FA   + + 
Sbjct: 201 HASQSSPPGDSAMLGHIYLPAFIGLGLGSVLTAPLGARFSSRVPAELLKRVFAWLLIALV 260

Query: 139 ILMLKR 144
           + +   
Sbjct: 261 VKLALS 266


>gi|288559619|ref|YP_003423105.1| hypothetical protein mru_0361 [Methanobrevibacter ruminantium M1]
 gi|288559630|ref|YP_003423116.1| hypothetical protein mru_0372 [Methanobrevibacter ruminantium M1]
 gi|288542329|gb|ADC46213.1| hypothetical protein mru_0361 [Methanobrevibacter ruminantium M1]
 gi|288542340|gb|ADC46224.1| hypothetical protein mru_0372 [Methanobrevibacter ruminantium M1]
          Length = 275

 Score =  137 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/249 (22%), Positives = 112/249 (44%), Gaps = 2/249 (0%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++ Y+ L+++    +G ++GL G+GGG+V+ P+       +G D    + V   T L V
Sbjct: 2   DLLFYVVLLLIGGCFAGFMAGLLGIGGGIVITPIQYYLLTSIGCDPKTSLTVTFATGLAV 61

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I  T + S  +H+++  I  + LK  +    +  ++ +++  ++D   L   F + C++ 
Sbjct: 62  ICVTMINSTRKHKQNNLIVKQHLKPMMVFGFVGAILGAVISQYIDVEVLKILFGVICIVS 121

Query: 138 GILMLKRDRLYCERKFPDNYVKY-IWGMVTGFLSGALG-VGGGIFTNLLMLFYGASIYKA 195
            + ++             +   +       G  SG +G  GG     + + +    I   
Sbjct: 122 TVFLVLIKSPTSLDNIKTDAGLFYSIAFACGLASGLIGPAGGAFIIPIFVAYLRYPITNT 181

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T++ +S       ++  I  GWG+ GLP +SLG+VN+   + +   SI+++  A  LS
Sbjct: 182 IGTTSALSIATTLAGVICYIVLGWGVQGLPDFSLGYVNLLQFVFLTITSIIVSGYAANLS 241

Query: 256 YMIGKKYLT 264
             I    L 
Sbjct: 242 KKINPTKLK 250


>gi|325295604|ref|YP_004282118.1| hypothetical protein Dester_1428 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325066052|gb|ADY74059.1| protein of unknown function DUF81 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 263

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 126/258 (48%), Gaps = 4/258 (1%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + +  +   LSG L+GLFG+GGG+V+VP+    F  M I ++I + +++ TSL VI  
Sbjct: 5   ETLLIFFIFGALSGFLAGLFGIGGGIVLVPLFWILFSHMKIPENIAIKLSIATSLSVITM 64

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            ++ +   H   G I ++ L   +  +    ++       +    L K FAI  L++GI 
Sbjct: 65  ITLFTSGFHILKGKIKLEELIKLLVWIVPGVILGVSFSHLLPAYILKKLFAIVLLIIGIK 124

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATATS 199
           +LK  R   + K  + ++  I   ++ FLS  LG+GGG   N +L  F    + K  A +
Sbjct: 125 ILKGTR-ELKAKLEEKFLIPITVALSAFLSSLLGIGGGTIVNSILFSFSKMKVDKVVALA 183

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           + +S + AF   +  +        +  W +G+V + AV+++   +I  + +  K+ + + 
Sbjct: 184 SIISFINAFFGSITYML--LPATKVLDWQVGYVYLPAVILVTVGAIPGSRMGLKVLHRVN 241

Query: 260 KKYLTIGFSMIMFTTSFV 277
              L   F++++   +  
Sbjct: 242 HLLLKRLFAILLVIVAIK 259


>gi|88603192|ref|YP_503370.1| hypothetical protein Mhun_1940 [Methanospirillum hungatei JF-1]
 gi|88188654|gb|ABD41651.1| protein of unknown function DUF81 [Methanospirillum hungatei JF-1]
          Length = 269

 Score =  135 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 71/253 (28%), Positives = 122/253 (48%), Gaps = 4/253 (1%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             ++G L+GLFG+GGG+VMVPV+      +G DD+  M +A+ TS  VI PT+V   +++
Sbjct: 15  GLVAGFLAGLFGIGGGVVMVPVMFFLLNDLGYDDN-AMAIAVATSAAVILPTAVAGAIKN 73

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR--DRL 147
                I         F   + ++  S +   +       AF+ F + M + M+ +    L
Sbjct: 74  FSGKQITWWPALILGFGGILGSMAGSTLSVLIPSQVHILAFSGFLIFMAVWMIIKQCRYL 133

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALI 206
                   +++  I G+  G  SG  G+GGG+    ++    G +I+K+   S     LI
Sbjct: 134 CAYAVRETDFILLILGIGVGVASGLFGIGGGVILTPVLTSILGMNIHKSIGISLTAMVLI 193

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           A   ++  I  GWG+ GL P+S+G+VN+  VL+++  SI       K    + +K L + 
Sbjct: 194 ASGTVVSYIVLGWGVTGLFPFSIGYVNLLFVLVLVLTSIPAVRFGVKTGSTMSEKKLQVL 253

Query: 267 FSMIMFTTSFVFA 279
           F  ++   +   A
Sbjct: 254 FIGMLILLAIRMA 266


>gi|227356176|ref|ZP_03840565.1| integral membrane protein [Proteus mirabilis ATCC 29906]
 gi|227163640|gb|EEI48556.1| integral membrane protein [Proteus mirabilis ATCC 29906]
          Length = 267

 Score =  135 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 111/254 (43%), Gaps = 8/254 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG----IDDSICMHVAMGTSLGV 77
            I  +I    +SG  + LFG GGG V VP+L      +     +     M +A+ TS  +
Sbjct: 1   MILWLISFGLISGITTWLFGFGGGFVTVPLLYTLILTLWAGDSLAGEHAMQIAVATSALI 60

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +  +++++ ++H +   I+ K++    + +    +  +L+ S V   ++   F  +  L 
Sbjct: 61  MLFSAIITTLKHHKAKKIDWKLIMILFWGIAFGGIFGALLASTVQGEWIRWIFIGYLFLT 120

Query: 138 GILMLKRDR---LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            +    R        E +   N  + + G + G ++  LGVGG + T  L+   G S+ +
Sbjct: 121 ILDCYFRPGFMAPRKEIQKVTNKKEALTGTIIGIIAAFLGVGGSVMTVPLLRRRGMSMTQ 180

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLN-GLPPWSLGFVNIGAVLIILPISILITPLATK 253
           + A +  ++  +A  A L  I   +    G     +G++ I A +I++  + +   +A +
Sbjct: 181 SAAMANTLTFPLALTATLTYILLSFTTPLGNSAGFVGYIWIKAAVILICSTWIGLKIAER 240

Query: 254 LSYMIGKKYLTIGF 267
               I  K+    +
Sbjct: 241 FLSRIPDKWHARVY 254


>gi|197285670|ref|YP_002151542.1| hypothetical protein PMI1813 [Proteus mirabilis HI4320]
 gi|194683157|emb|CAR43769.1| putative membrane protein [Proteus mirabilis HI4320]
          Length = 267

 Score =  135 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 111/254 (43%), Gaps = 8/254 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG----IDDSICMHVAMGTSLGV 77
            I  +I    +SG  + LFG GGG V VP+L      +     +     M +A+ TS  +
Sbjct: 1   MILWLISFGLISGITTWLFGFGGGFVTVPLLYTLILTLWAGDSLAGEHAMQIAVATSALI 60

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +  +++++ ++H +   I+ K++    + +    +  +L+ S V   ++   F  +  L 
Sbjct: 61  MLFSAIITTLKHHKAKKIDWKLIMILFWGIAFGGIFGALLASSVQGEWIRWIFIGYLFLT 120

Query: 138 GILMLKRDR---LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            +    R        E +   N  + + G + G ++  LGVGG + T  L+   G S+ +
Sbjct: 121 ILDCYFRPGFMAPRKEIQKVTNKKEALTGTIIGIIAAFLGVGGSVMTVPLLRRRGMSMTQ 180

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLN-GLPPWSLGFVNIGAVLIILPISILITPLATK 253
           + A +  ++  +A  A L  I   +    G     +G++ I A +I++  + +   +A +
Sbjct: 181 SAAMANTLTFPLALTATLTYILLSFTTPLGDSAGFVGYIWIKAAVILICSTWIGLKIAER 240

Query: 254 LSYMIGKKYLTIGF 267
               I  K+    +
Sbjct: 241 FLSRIPDKWHARVY 254


>gi|332184891|gb|AEE27145.1| hypothetical membrane protein [Francisella cf. novicida 3523]
          Length = 262

 Score =  135 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 51/246 (20%), Positives = 111/246 (45%), Gaps = 2/246 (0%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           SG +SG+FG G GL+ VP            +   M VA+ +++       +++  +  ++
Sbjct: 17  SGFVSGIFGGGSGLINVPGFYLLLHYFYPLNDHLMQVAIASAVSSGVLVGILATFKQHKY 76

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
             I    L+  +F + +  ++   +++ +  + L   F+I  ++M   M ++ +   +  
Sbjct: 77  KQICYDTLRWSLFSILLGGILGVFLVNVIKSNDLKIVFSILLIIMATWMWRKTKKALKVW 136

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                +K +     G  +   G+   +F   L++  G  I KA  TS  ++  I+    +
Sbjct: 137 QAPLILKTLSAFFAGMCTMLSGI--SVFFIPLLIKCGLDIRKAIGTSTIITFFISLVMSI 194

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             I  GW  + LPP+ +G++N+   L  L  S++   +  K++ +   K+L   + ++MF
Sbjct: 195 FFISFGWHASNLPPFCIGYLNLIIFLAGLIPSLIGVNIGVKVTALFSHKHLQTIYILMMF 254

Query: 273 TTSFVF 278
             + V 
Sbjct: 255 IIAIVM 260


>gi|184158190|ref|YP_001846529.1| permease [Acinetobacter baumannii ACICU]
 gi|183209784|gb|ACC57182.1| predicted permease [Acinetobacter baumannii ACICU]
          Length = 269

 Score =  134 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 106/242 (43%), Gaps = 8/242 (3%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSLGVIAPT 81
           + +   LSG  + LFG GGG V VP+L         ++S      M +A+ TS  V+  +
Sbjct: 5   LFLFGLLSGITTWLFGFGGGFVAVPLLYTVIIQKWSNESSVGIHAMQIAVATSAFVMLCS 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  +   H R G I+ + ++     + +  +V ++M S  + ++L   F  +  +  I  
Sbjct: 65  ASFATFRHYRSGHIDWQQIRFLWGGIALGGIVGAVMASLFNGNWLRWIFMSYVFITIIDC 124

Query: 142 LKRDRLYCERKFPDNYVK---YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             R       +   +Y +    I G + G+++  LGVGG + T  L+   G+S+ +A A 
Sbjct: 125 YYRPGFMVTSRQKQHYGQNSELIKGGIIGWVAALLGVGGSVMTVPLLRRRGSSMAEAAAI 184

Query: 199 SAGVSALIAFPALLVR-IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +  ++  ++  A L   + S W     P   +G +   A L ++  + +    + K    
Sbjct: 185 ANILTLPLSLTATLTYCVLSIWQSTWTPNGFIGLIWFEAALFLVAGTWIGLYFSEKFISK 244

Query: 258 IG 259
           + 
Sbjct: 245 LP 246


>gi|332875490|ref|ZP_08443311.1| hypothetical protein HMPREF0022_02947 [Acinetobacter baumannii
           6014059]
 gi|322508511|gb|ADX03965.1| permease [Acinetobacter baumannii 1656-2]
 gi|323518127|gb|ADX92508.1| permease [Acinetobacter baumannii TCDC-AB0715]
 gi|332736307|gb|EGJ67313.1| hypothetical protein HMPREF0022_02947 [Acinetobacter baumannii
           6014059]
          Length = 271

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 106/242 (43%), Gaps = 8/242 (3%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSLGVIAPT 81
           + +   LSG  + LFG GGG V VP+L         ++S      M +A+ TS  V+  +
Sbjct: 7   LFLFGLLSGITTWLFGFGGGFVAVPLLYTVIIQKWSNESSVGIHAMQIAVATSAFVMLCS 66

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  +   H R G I+ + ++     + +  +V ++M S  + ++L   F  +  +  I  
Sbjct: 67  ASFATFRHYRSGHIDWQQIRFLWGGIALGGIVGAVMASLFNGNWLRWIFMSYVFITIIDC 126

Query: 142 LKRDRLYCERKFPDNYVK---YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             R       +   +Y +    I G + G+++  LGVGG + T  L+   G+S+ +A A 
Sbjct: 127 YYRPGFMVTSRQKQHYGQNSELIKGGIIGWVAALLGVGGSVMTVPLLRRRGSSMAEAAAI 186

Query: 199 SAGVSALIAFPALLVR-IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +  ++  ++  A L   + S W     P   +G +   A L ++  + +    + K    
Sbjct: 187 ANILTLPLSLTATLTYCVLSIWQSTWTPNGFIGLIWFEAALFLVAGTWIGLYFSEKFISK 246

Query: 258 IG 259
           + 
Sbjct: 247 LP 248


>gi|95928914|ref|ZP_01311660.1| protein of unknown function DUF81 [Desulfuromonas acetoxidans DSM
           684]
 gi|95135259|gb|EAT16912.1| protein of unknown function DUF81 [Desulfuromonas acetoxidans DSM
           684]
          Length = 271

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 6/247 (2%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M F +   +V +  L I A  LSG L        G+++VP+    F L+G+   + +H A
Sbjct: 1   MTFWAPQVLVGFAVLGICAGCLSGLLGIGG----GVILVPLFLWCFHLVGVHPDVLVHCA 56

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
             TSL +I PTS+ + + H   G ++   +        +  +V +   S +    L   F
Sbjct: 57  FATSLAIIIPTSISNTLGHNAQGHVDFHQVVFLAVGSALGALVGAWGASMLSGPILRVLF 116

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYV-KYIWGMVTGFLSGALGVGGGIFTNLLMLFY- 188
            +  L +   ++       E+   D  +   + G ++G  S   G+GGG+    LM+ + 
Sbjct: 117 GVMQLTVAAKLVFGGMSPSEKALIDRPISLLVVGGISGAFSAFFGIGGGVIAVPLMVLFL 176

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
              I+ A   S+ +  + +    L  IY+GW ++ LP  ++GFV +  VL++LP S++ +
Sbjct: 177 SFPIHLAVGNSSALIVVSSLTGTLAYIYNGWQISHLPHGAVGFVVLPVVLLVLPFSLIGS 236

Query: 249 PLATKLS 255
            +  +L+
Sbjct: 237 RIGVRLA 243


>gi|319789078|ref|YP_004150711.1| protein of unknown function DUF81 [Thermovibrio ammonificans HB-1]
 gi|317113580|gb|ADU96070.1| protein of unknown function DUF81 [Thermovibrio ammonificans HB-1]
          Length = 262

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 119/254 (46%), Gaps = 3/254 (1%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++      +G ++GLFG+GGG+++VP+    FQ +G+   +   +A+ TSL VIA +++ 
Sbjct: 7   VLFTVGIAAGFVAGLFGIGGGVILVPLFWFFFQKIGVPQELSFKLAVATSLSVIAVSTLF 66

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + H   G+  +K     +       +   L+  ++    L   F IF ++ G+ +L  
Sbjct: 67  STVSHILKGSYPLKEAAKLLIFSLPGVLAGVLLAHYLPVKALKNIFGIFLVITGVKLLLS 126

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATATSAGVS 203
            R   + +  +  +  +  +++GFLS  LG+GGG+  N +L    G  + +  A ++  S
Sbjct: 127 GRGSRKLRVKERVIVPLTVVLSGFLSSLLGIGGGVVVNSILFSVEGIKVERTVAIASAAS 186

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            L A     + +        +    +G V +   +++   S++   L  ++   + + +L
Sbjct: 187 FLNALLGAALYLMV--PAEKVLCCQVGLVYVPGAVLVACGSLIGVKLGLRVLRGLNQHHL 244

Query: 264 TIGFSMIMFTTSFV 277
              F++++   +  
Sbjct: 245 KKLFAVMLLVIAAK 258


>gi|262279143|ref|ZP_06056928.1| permease [Acinetobacter calcoaceticus RUH2202]
 gi|262259494|gb|EEY78227.1| permease [Acinetobacter calcoaceticus RUH2202]
          Length = 271

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 8/257 (3%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSLGVIAPT 81
           + +   LSG  + LFG GGG V VP+L         ++S      M +++ TS  V+  +
Sbjct: 7   LFLFGLLSGVTTWLFGFGGGFVAVPLLYTVIIHKWGNESSVGIHSMQISVATSAFVMLCS 66

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  +   H   G I+ + ++     + +  VV ++M S    ++L   F  +  +  I  
Sbjct: 67  ASFATFRHYLSGHIDWQKIRFLWGGIALGGVVGAVMASLFSGNWLRWIFMSYVFVTIIDC 126

Query: 142 LKRDRLYCERKFPDNYVK---YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             R       +   NY +    I G + G+++  LGVGG + T  L+   G+S+ +A A 
Sbjct: 127 YYRPGFMVTSRQRQNYGQNSELIKGGIIGWVAALLGVGGSVMTVPLLRRRGSSMAEAVAI 186

Query: 199 SAGVSALIAFPALLVR-IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +  ++  ++  A L   + S W     P   +G +   A L ++  + +    + K    
Sbjct: 187 ANTLTLPLSLTATLTYCVLSLWQSEWTPNGFIGLIWFEAALFLVAGTWIGLYFSEKFISK 246

Query: 258 IGKKYLTIGFSMIMFTT 274
           +   +    + +++   
Sbjct: 247 LPDLWRAKLYPLLLIGV 263


>gi|239502524|ref|ZP_04661834.1| hypothetical protein AbauAB_09447 [Acinetobacter baumannii AB900]
          Length = 269

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 111/257 (43%), Gaps = 8/257 (3%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSLGVIAPT 81
           + +   LSG  + LFG GGG V VP+L         ++S      M +A+ TS  V+  +
Sbjct: 5   LFLFGLLSGITTWLFGFGGGFVAVPLLYTVIIQKWSNESNIGIHAMQIAVATSAFVMLCS 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  +   H R G I+ + ++     + +  +V ++M S  + ++L   F  +  +  +  
Sbjct: 65  ASFAIFRHYRSGHIDWQKIRFLWGGIALGGIVGAVMASLFNGNWLRWIFMGYVFITILDC 124

Query: 142 LKRDRLYCERKFPDNYVK---YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             R       +   +Y +    I G + G+++  LGVGG + T  L+   G+S+ +A A 
Sbjct: 125 YYRPGFIVTSRQKQHYSQNSELIKGGIIGWVAALLGVGGSVMTVPLLRRRGSSMAEAAAI 184

Query: 199 SAGVSALIAFPALLVR-IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +  ++  ++  A L   + S W     P   +G +   A L ++  + +    + K    
Sbjct: 185 ANILTLPLSLTATLTYCVLSIWQSTWTPNGFIGLIWFEAALFLVAGTWIGLYFSEKFISK 244

Query: 258 IGKKYLTIGFSMIMFTT 274
           +   +    + +++   
Sbjct: 245 LPDLWRAKLYPLLLIIV 261


>gi|169633567|ref|YP_001707303.1| hypothetical protein ABSDF1960 [Acinetobacter baumannii SDF]
 gi|169152359|emb|CAP01295.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter baumannii]
          Length = 274

 Score =  132 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 105/242 (43%), Gaps = 8/242 (3%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSLGVIAPT 81
           + +   LSG  + LFG GGG V VP+L         ++S      M +A+ TS  V+  +
Sbjct: 10  LFLFGLLSGITTWLFGFGGGFVAVPLLYTVIIQKWSNESNIGIHAMQIAVATSAFVMLCS 69

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  +   H R G I+ + ++     + +  +V ++M S  + ++L   F  +  +  +  
Sbjct: 70  ASFAVFRHYRSGHIDWQKIRFLWGGIALGGIVGAVMASLFNGNWLRWIFMGYVFITILDC 129

Query: 142 LKRDRLYCERKFPDNYVK---YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             R       +   +Y +    I G + G+++  LGVGG + T  L+   G+S+ +A A 
Sbjct: 130 YYRPGFIVTSRQKQHYGQNSELIKGGIIGWVAALLGVGGSVMTVPLLRRRGSSMAEAAAI 189

Query: 199 SAGVSALIAFPALLVR-IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +  ++  ++  A L   + S W     P   +G +     L ++  + +    + K    
Sbjct: 190 ANILTLPLSLTATLTYCVLSVWQSEWAPSGFIGLIWFETALFLVAGTWIGLYFSEKFISK 249

Query: 258 IG 259
           + 
Sbjct: 250 LP 251


>gi|260553946|ref|ZP_05826212.1| permease [Acinetobacter sp. RUH2624]
 gi|260404900|gb|EEW98404.1| permease [Acinetobacter sp. RUH2624]
          Length = 274

 Score =  132 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 104/248 (41%), Gaps = 8/248 (3%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSL 75
           +  +  + +   LSG  + LFG GGG V VP+L          +S      M +A+ TS 
Sbjct: 4   ITMLYELFLFGLLSGVTTWLFGFGGGFVAVPLLYAVIIQKWSSESSVGIHAMQIAVATSA 63

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            V+  ++  +   H R G I+ + +      +    +V ++M S  + ++L   F  +  
Sbjct: 64  FVMLCSASFATFRHYRSGHIDWQKINFLWGGIAFGGIVGAVMASLFNGNWLRWIFMGYVF 123

Query: 136 LMGILMLKRDRLYCERKFPDNYVK---YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           +  +    R       K   ++ +    I G + G+++  LGVGG + T  ++   G+S+
Sbjct: 124 ITILDCYYRPGFMVASKQKQDHGQNSELIKGGIIGWVAALLGVGGSVMTVPMLRRRGSSM 183

Query: 193 YKATATSAGVSALIAFPALLVR-IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
            +A A +  ++  ++  A     + S W     P   +G +   A L ++  + +    +
Sbjct: 184 AEAAAIANILTLPLSLTATFTYCVLSIWQSTWAPSGFIGLIWFEAALFLVAGTWIGLYFS 243

Query: 252 TKLSYMIG 259
            K    + 
Sbjct: 244 EKFISKLP 251


>gi|299770082|ref|YP_003732108.1| permease [Acinetobacter sp. DR1]
 gi|298700170|gb|ADI90735.1| permease [Acinetobacter sp. DR1]
          Length = 267

 Score =  131 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 8/241 (3%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLS-KAFQLMGIDDSI---CMHVAMGTSLGVIAPT 81
           + +   LSG  + LFG GGG V VP+L     Q  G + S+    M +A+ TS  V+  +
Sbjct: 5   LFLFGLLSGVTTWLFGFGGGFVAVPLLYTVIIQKWGNESSVGINAMQIAVATSAFVMLCS 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  +   H R G I+ + ++     +    VV ++M S  + ++L   F  +  +  +  
Sbjct: 65  ASFATFRHYRSGQIDWQKIRFLWSGIAFGGVVGAVMASLFNGNWLRWIFMGYVFITILDC 124

Query: 142 LKRDRLYCERKFPDNY---VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             RD      +   NY    + I G + G+++  LGVGG + T  L+   G+S+ +A A 
Sbjct: 125 YYRDGFMVTSRQKQNYSENSELIKGGIIGWVAALLGVGGSVMTVPLLRRRGSSMAEAAAI 184

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++  ++  A L         +  P   +G +   A L ++  + +    + K    +
Sbjct: 185 ANILTLPLSLTATLTYCVLSLWQST-PNGFIGLIWFEAALFLVAGTWIGLYFSEKFISKL 243

Query: 259 G 259
            
Sbjct: 244 P 244


>gi|288559974|ref|YP_003423460.1| hypothetical protein mru_0717 [Methanobrevibacter ruminantium M1]
 gi|288542684|gb|ADC46568.1| hypothetical protein mru_0717 [Methanobrevibacter ruminantium M1]
          Length = 245

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 67/234 (28%), Positives = 115/234 (49%), Gaps = 4/234 (1%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVP+    F  +G+D S+ M V++GTSL +I PT+     +H++     ++         
Sbjct: 1   MVPLQFFLFTSVGVDPSLAMMVSLGTSLAIIIPTASSGAYQHQKKNKSIVRPGIRLAVFG 60

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK--YIWGMV 165
            I      L+ + V    L   FA   + + + ML   R   E+   D  +    I G  
Sbjct: 61  IIGGFCGGLLANMVPTRILQMIFACLLIFVALDMLFGSRSDGEKALIDFNLLNGGIVGFS 120

Query: 166 TGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            G +SG LGVGGG+F    L + +G S+ +A  TS+   A  A   L+  IY+G+G+N +
Sbjct: 121 IGIISGLLGVGGGVFLIPSLCILFGFSLIEAIGTSSVFIAFTAIGGLISYIYTGFGVNPM 180

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           P + LG+V++   ++I+  S+ +  +  KL Y + +K L   F++I+   +   
Sbjct: 181 P-YCLGYVSLINFVVIVLFSVPMATIGAKLVYKLPEKRLKQIFAIILIYMAIKM 233


>gi|150399001|ref|YP_001322768.1| hypothetical protein Mevan_0247 [Methanococcus vannielii SB]
 gi|150011704|gb|ABR54156.1| protein of unknown function DUF81 [Methanococcus vannielii SB]
          Length = 277

 Score =  130 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 13/246 (5%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            +MVP+L+  FQ +GI +   +  A+GTSL VI  TS+ S  EH +   I          
Sbjct: 30  FLMVPILTYIFQSLGISEDNSIAFAVGTSLSVIFVTSLKSAYEHHKLKNIIFNYSLLLGI 89

Query: 106 VLPITTVVTSLMI-SHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER---------KFPD 155
                T+V   ++ +++D       F I  +++ + M                       
Sbjct: 90  SGLFGTIVGVHIVTNYLDGGLHKMLFGIILIILSLNMALNTVTPENELDITQELKCDTTK 149

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVR 214
             +   +G++ G LS   G+GGG     ++       I K+  TS G+ ++++    L  
Sbjct: 150 YPLILAFGIIMGVLSSVFGIGGGTIAVPVLTLCLKLPIKKSVGTSLGMMSIVSLGGFLGY 209

Query: 215 IYSGWGLNGLPPW--SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           + S   +     +   +G+V+I +++ I   SI+ +    +LS  +  K L   F+ I+F
Sbjct: 210 LSSPVEILDSYKYLNFVGYVSISSLISISISSIIFSKYGAELSNRLDAKSLKRFFAGILF 269

Query: 273 TTSFVF 278
                 
Sbjct: 270 IVGLKM 275


>gi|193077401|gb|ABO12209.2| hypothetical protein A1S_1782 [Acinetobacter baumannii ATCC 17978]
          Length = 267

 Score =  129 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/241 (20%), Positives = 103/241 (42%), Gaps = 8/241 (3%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSLGVIAPT 81
           + +   LSG  + LFG GGG V VP+L         ++S      M +A+ TS  V+  +
Sbjct: 5   LFLFGLLSGITTWLFGFGGGFVAVPLLYTVIIQKWSNESNIGIHAMQIAVATSAFVMLCS 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  +   H R G I+ + ++     + +  +V ++  S  + ++L   F  +  +  +  
Sbjct: 65  ASFAVFRHYRSGHIDWQKIRFLWGGIALGGIVGAVTASLFNGNWLRWIFMGYVFITILDC 124

Query: 142 LKRDRLYCERKFPDNYVK---YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             R       +   +Y +    I G + G+++  LGVGG + T  L+   G+S+ +A A 
Sbjct: 125 YYRPGFIVTSRQKQHYGQNSELIKGGIIGWVAALLGVGGSVMTVPLLRRRGSSMAEAAAI 184

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++  ++  A L         +  P   +G +   A L ++  + +    + K    +
Sbjct: 185 ANILTLPLSLTATLTYCVLSIWQST-PNGFIGLIWFKAALFLVAGTWIGLYFSEKFISKL 243

Query: 259 G 259
            
Sbjct: 244 P 244


>gi|260554946|ref|ZP_05827167.1| permease [Acinetobacter baumannii ATCC 19606]
 gi|260411488|gb|EEX04785.1| permease [Acinetobacter baumannii ATCC 19606]
          Length = 272

 Score =  129 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 104/241 (43%), Gaps = 8/241 (3%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSLGVIAPT 81
           + +   LSG  + LFG GGG V VP+L         ++S      M +A+ TS  V+  +
Sbjct: 10  LFLFGLLSGITTWLFGFGGGFVAVPLLYTVIIQKWSNESNIGIHAMQIAVATSAFVMLCS 69

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  +   H R G I+ + ++     + +  +V ++M S  + ++L   F  +  +  +  
Sbjct: 70  ASFAVFRHYRSGHIDWQKIRFLWGGIALGGIVGAVMASLFNGNWLRWIFMGYVFITILDC 129

Query: 142 LKRDRLYCERKFPDNYVK---YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             R       +   +Y +    I G + G+++  LGVGG + T  L+   G+S+ +A A 
Sbjct: 130 YYRPGFIVTLRQKQHYGQNSELIKGGIIGWVAALLGVGGSVMTVPLLRRRGSSMAEAAAI 189

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++  ++  A L         +  P   +G +   A L ++  + +    + K    +
Sbjct: 190 ANILTLPLSLTATLTYCVLSIWQST-PNGFIGLIWFEAALFLVAGTWIGLYFSEKFISKL 248

Query: 259 G 259
            
Sbjct: 249 P 249


>gi|261349442|ref|ZP_05974859.1| integral membrane protein [Methanobrevibacter smithii DSM 2374]
 gi|288861805|gb|EFC94103.1| integral membrane protein [Methanobrevibacter smithii DSM 2374]
          Length = 270

 Score =  129 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 4/264 (1%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
             ++Y   +I+   ++G  SGL GVGGG ++VP      + +G+D S+ M +++GTSL +
Sbjct: 3   FTLEYFIGLILIGVVAGFASGLLGVGGGFLIVPFQYFLLEYLGVDPSLAMMISLGTSLAI 62

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I PT+      H +     +K          + +++  L+ S +    L   F    L +
Sbjct: 63  IIPTATSGASRHLKVMDNILKPGIRLGLFGIVGSILGGLIASMLPTQILKIIFGCLLLFI 122

Query: 138 GIL--MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYK 194
            I   M    +    R   +     + G++ G  SG LGVGGG+F  L++   +G S+ +
Sbjct: 123 AIRNLMSADKKTSKARAKFNLINIAVVGVLVGISSGLLGVGGGVFIILILTVIFGFSMIE 182

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A   S+   +L A    +  I SGWG+N  P +SLG+V++    +I   S+ +     K+
Sbjct: 183 AIGISSVFISLTAIGGTVSYIISGWGVNPFP-YSLGYVSLVNFAVIAMFSVPLAYYGAKI 241

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
           ++ + +K L   F +++   S   
Sbjct: 242 AHKVPEKRLKQIFGLVVLYISLKM 265


>gi|222446019|ref|ZP_03608534.1| hypothetical protein METSMIALI_01668 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435584|gb|EEE42749.1| hypothetical protein METSMIALI_01668 [Methanobrevibacter smithii
           DSM 2375]
          Length = 270

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 4/264 (1%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
             ++Y   +I+   ++G  SGL GVGGG ++VP      + +G+D S+ M +++GTSL +
Sbjct: 3   FTLEYFIGLILIGVVAGFASGLLGVGGGFLIVPFQYFLLEYLGVDPSLAMMISLGTSLAI 62

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           I PT+      H +     +K          + +++  L+ S +    L   F    L +
Sbjct: 63  IIPTATSGASRHLKVMDNILKPGIRLGLFGIVGSMLGGLIASMLPTQILKIIFGCLLLFI 122

Query: 138 GIL--MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYK 194
            I   M    +    R   +     + G++ G  SG LGVGGG+F  L++   +G S+ +
Sbjct: 123 AIRNLMSADKKTSKARAKFNLINIAVVGVLVGISSGLLGVGGGVFIILILTAIFGFSMIE 182

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A   S+   +L A    +  I SGWG+N  P +SLG+V++    +I   S+ +     K+
Sbjct: 183 AIGISSVFISLTAIGGTVSYIISGWGVNPFP-YSLGYVSLVNFAVIAMFSVPLAYYGAKI 241

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
           ++ + +K L   F +++   S   
Sbjct: 242 AHKVPEKRLKQIFGLVVLYISLKM 265


>gi|118594433|ref|ZP_01551780.1| Predicted permease [Methylophilales bacterium HTCC2181]
 gi|118440211|gb|EAV46838.1| Predicted permease [Methylophilales bacterium HTCC2181]
          Length = 263

 Score =  128 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 52/257 (20%), Positives = 104/257 (40%), Gaps = 1/257 (0%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG-IDDSICMHVAMGTSLGVIAPT 81
           I + + +    G ++GLFG+GGGL++VPVL+ +      I     + +A+ T+L  +  T
Sbjct: 3   IIIFLFSGIFIGVIAGLFGLGGGLLIVPVLTYSLIFFSKIPLEQAILIAISTALASMVMT 62

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             ++   H+++  I++ I+K ++  L + +++    I  +   +L   F I+       M
Sbjct: 63  GAVAVYAHKKNNNISLTIIKRFLVGLILGSLIVGFSIDLIPGDYLRSGFIIYVFFTAYRM 122

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
               RL      P      I G     +SG LG+GGG      ++        A  TS+ 
Sbjct: 123 FVDRRLTNRPSLPSFMKANIIGFFFALISGVLGIGGGTLFTPYLIKRDVPSKLAIGTSSA 182

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
               I     +    +           +G+V + A+L +   S+L   ++      +   
Sbjct: 183 FGFFIGLFTSITVFINSTSFELNSLPLIGYVYVPAILFLTLPSLLFVKISAGWLIKLSDD 242

Query: 262 YLTIGFSMIMFTTSFVF 278
                F+ ++     + 
Sbjct: 243 CAKKWFASLLIVIGVLM 259


>gi|188025747|ref|ZP_02959652.2| hypothetical protein PROSTU_01536 [Providencia stuartii ATCC 25827]
 gi|188020324|gb|EDU58364.1| hypothetical protein PROSTU_01536 [Providencia stuartii ATCC 25827]
          Length = 277

 Score =  127 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 118/262 (45%), Gaps = 11/262 (4%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSLGVIA 79
            L+ +  F+SG  + LFG GGG + VP+L     L+   +S    + M +A+ TS  V+ 
Sbjct: 9   LLLCLFGFISGITTALFGFGGGFITVPLLYALITLVWGPESEASAVAMQIAVATSTCVMI 68

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            ++ +S   H R G +N  I++ +I  + +  ++ + +   VD  ++   F  + ++  +
Sbjct: 69  FSASLSSRAHYRKGHLNWSIIRPFIIPISLGGILGAFIALSVDSEWIRWLFIGYLVITIL 128

Query: 140 LMLKRD---RLYCERKFPDNYVKYI---WGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
             L R    + + E   P     +     G+V G ++  LGVGG + T  LM   GA++ 
Sbjct: 129 DCLIRPGFMKTHTEGITPSGGGVFADIPIGLVIGAVAAFLGVGGSVMTVPLMRRRGATMI 188

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLN-GLPPWSLGFVNIGAVLIILPISILITPLAT 252
           +A A +  ++  +A    L   Y     +  L    +G V I   LI++  S L    A+
Sbjct: 189 QAAALANPLTLPMAITGTLTYFYFALTEHVQLGAGFIGMVYIKGALILIVTSWLGIRFAS 248

Query: 253 KLSYMIGKKYLTIGFSMIMFTT 274
            L   +  K     + +++   
Sbjct: 249 LLMPYLSDKRHAQSYPLLLLIV 270


>gi|212712467|ref|ZP_03320595.1| hypothetical protein PROVALCAL_03561 [Providencia alcalifaciens DSM
           30120]
 gi|212684924|gb|EEB44452.1| hypothetical protein PROVALCAL_03561 [Providencia alcalifaciens DSM
           30120]
          Length = 271

 Score =  127 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 115/262 (43%), Gaps = 11/262 (4%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGID----DSICMHVAMGTSLGVIA 79
            L+ +  F+SG  + LFG GGG + VP+L     L+         + M +A+ TS  V+ 
Sbjct: 3   LLLCLFGFISGITTALFGFGGGFIAVPLLYALITLVWGPRHDTSEVAMQIAVATSTFVMI 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +S   H   G +N +I++ ++  + I  ++ +L+   VD  ++   F  + ++  +
Sbjct: 63  FSSSLSSRAHYLKGNLNWQIIQPFMIPISIGGILGALIALSVDSEWIRWIFIGYLIITIL 122

Query: 140 LMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
               R      +   +  ++       + G V G ++  LGVGG + T  LM   GAS+ 
Sbjct: 123 DCFIRPGFLQTQAEGNTLIRGKCVTDAVIGTVIGTVAAFLGVGGSVMTVPLMRRRGASML 182

Query: 194 KATATSAGVSALIAFPALLVRIYSGWG-LNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           +A A +  ++  +A    ++  Y        L    LG + I   LI++  S +    A+
Sbjct: 183 QAAAFANPLTLPMAITGSIIYFYFAMEKHFELGTGFLGMIYIKGALILIATSWIGIRFAS 242

Query: 253 KLSYMIGKKYLTIGFSMIMFTT 274
            L   +  K     + +++   
Sbjct: 243 FLMPYLSDKRHAQSYPILLMIV 264


>gi|261343525|ref|ZP_05971170.1| putative membrane protein [Providencia rustigianii DSM 4541]
 gi|282568674|gb|EFB74209.1| putative membrane protein [Providencia rustigianii DSM 4541]
          Length = 271

 Score =  127 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 112/262 (42%), Gaps = 11/262 (4%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD----SICMHVAMGTSLGVIA 79
            L+ +  F+SG  + LFG GGG + VP+L     L+         I M +A+ TS  V+ 
Sbjct: 3   LLLCLFGFISGITTALFGFGGGFITVPLLYALITLVWGSQLDVRDIAMQIAVATSTCVMI 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +S   H   G ++ K++K +I  + I  V+ +++   VD  ++   F  + ++  +
Sbjct: 63  FSSSVSSRAHYLKGNLDWKMIKPFILPISIGGVLGAMIALSVDSEWIRWIFIGYLVVTIL 122

Query: 140 LMLKRDRLYCERK------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
               R      +             +   GM+ G ++  LGVGG + T  LM   GAS+ 
Sbjct: 123 DCFIRPGFMKTQPKGINLNQGSYLAEGTIGMLIGTVAAFLGVGGSVMTVPLMRRRGASML 182

Query: 194 KATATSAGVSALIAFPALLVRIYSGWG-LNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           +A A +  ++  +A    ++  Y        L     G + I   LI++  S L    A+
Sbjct: 183 QAAAFANPLTLPMAITGSVMYFYFAVEKHIELGSGFWGMIYIKGALILIATSWLGIRFAS 242

Query: 253 KLSYMIGKKYLTIGFSMIMFTT 274
            L   +  K     + +++   
Sbjct: 243 FLMPYLSDKRHAQSYPILLMVV 264


>gi|14521729|ref|NP_127205.1| hypothetical protein PAB1010 [Pyrococcus abyssi GE5]
 gi|5458948|emb|CAB50435.1| Predicted permease [Pyrococcus abyssi GE5]
          Length = 253

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 21/253 (8%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V   ++GTL+ +FG+GGG ++VP+L+           + +H A+GTS   I  T++ S 
Sbjct: 11  FVTGVVTGTLAAMFGLGGGFLLVPILNLM--------GVEIHHAVGTSSASIIFTALSSS 62

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             + R   I  ++         +   + + M S +    L   F +  + +   M +  R
Sbjct: 63  YAYHRQKRILYRVGILLASTAVVGAYLGAWMTSFISPGKLKVIFGVTLIFVAYRMFRGKR 122

Query: 147 LYCERKFPDNYVKY-IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
                +   N     I G  +G  SG LGVGGGI    L+ + G  I+ A ATS+     
Sbjct: 123 GERREEISVNEKLVPIGGFFSGIASGLLGVGGGIINVPLLTWLGVPIHYAVATSSFAIVF 182

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
            +  + +              + LG V +  + +++P  I+   +  +++       L  
Sbjct: 183 TSTSSAIK------------HYFLGNVELYWLPLLVPGLIIGAQIGARIAKRTKASSLRK 230

Query: 266 GFSMIMFTTSFVF 278
           GF+++M   +   
Sbjct: 231 GFAVVMLILAIRM 243



 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 8/120 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+ +  F SG  SGL GVGGG++ VP+L+           + +H A+ TS   I  TS  
Sbjct: 135 LVPIGGFFSGIASGLLGVGGGIINVPLLTWL--------GVPIHYAVATSSFAIVFTSTS 186

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S ++H   G + +  L   +  L I   + + +      S L K FA+  L++ I M+ +
Sbjct: 187 SAIKHYFLGNVELYWLPLLVPGLIIGAQIGARIAKRTKASSLRKGFAVVMLILAIRMILK 246


>gi|134302790|ref|YP_001122758.1| hypothetical protein FTW_2011 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134050567|gb|ABO47638.1| hypothetical membrane protein [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 264

 Score =  126 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 101/232 (43%), Gaps = 2/232 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP            +   M VA+ +++       +++ ++  ++  I    L+  +  
Sbjct: 33  INVPGFYLLLHYFYPINDHLMQVAIASAVSSGISVGLLATLKQHKYKQICYDTLRWSLIS 92

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + +  ++   +++ +  S L   F+I  ++M   M ++ +   +       +K I   + 
Sbjct: 93  ILLGGILGVFLVNIIKSSDLKIVFSILLIIMATWMWRKTKTTLKVWQAPLALKSIGAFLA 152

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G  +   G+   +F   L+   G  I KA  TS  ++  I+    +  I  GW  + LPP
Sbjct: 153 GMFTMLSGI--SVFFVPLLTKCGLDIRKAIGTSTIITFFISLVMSIFFISFGWHASNLPP 210

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +S+G++N+   L+ L  S++   +  K +    +KYL I + ++MF  +   
Sbjct: 211 YSIGYLNLIIFLVGLIPSLIGVNIGVKATASFPQKYLQIIYILMMFIIAITM 262


>gi|56708779|ref|YP_170675.1| hypothetical protein FTT_1789 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110671251|ref|YP_667808.1| hypothetical protein FTF1789 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224457990|ref|ZP_03666463.1| hypothetical protein FtultM_10476 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254371389|ref|ZP_04987390.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254875646|ref|ZP_05248356.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56605271|emb|CAG46422.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110321584|emb|CAL09805.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. tularensis FSC198]
 gi|151569628|gb|EDN35282.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254841645|gb|EET20081.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282160105|gb|ADA79496.1| hypothetical membrane protein [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 264

 Score =  126 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 101/232 (43%), Gaps = 2/232 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP            +   M VA+ +++       +++ ++  ++  I    L+  +  
Sbjct: 33  INVPGFYLLLHYFYPINDHLMQVAIASAVSSGISVGLLATLKQHKYKQICYDTLRWSLIS 92

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + +  ++   +++ +  S L   F+I  ++M   M ++ +   +       +K I   + 
Sbjct: 93  ILLGGILGVFLVNIIKSSDLKIVFSILLIIMATWMWRKTKTTLKVWQAPLALKSIGAFLA 152

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G  +   G+   +F   L+   G  I KA  TS  ++  I+    +  I  GW  + LPP
Sbjct: 153 GMFTMLSGI--SVFFVPLLTKCGLDIRKAIGTSTIITFFISLVMSIFFISFGWHASNLPP 210

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +S+G++N+   L+ L  S++   +  K +    +KYL I + ++MF  +   
Sbjct: 211 YSIGYLNLIIFLVGLIPSLIGVNIGVKATASFPQKYLQIIYILMMFIIAITM 262


>gi|332158788|ref|YP_004424067.1| hypothetical protein PNA2_1147 [Pyrococcus sp. NA2]
 gi|331034251|gb|AEC52063.1| hypothetical protein PNA2_1147 [Pyrococcus sp. NA2]
          Length = 249

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 108/252 (42%), Gaps = 20/252 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +   ++GTL+ +FG+GGG ++VP+L+           + +H A+GTS   I  T++ S 
Sbjct: 8   FIVGIVTGTLAAMFGLGGGFLLVPILNMM--------GVEIHHAIGTSSASIIFTALSSS 59

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             + R   I   +         +   + + + S +    L   F I  + +   M+++  
Sbjct: 60  YAYHRQRRIYYDVGILLASTAIVGAYIGAWLTSIISPGKLKVIFGISLIFVAYRMIRKRG 119

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
              E+   +  V  + G  +G +SG LGVGGGI     + + G  I+ A ATS+      
Sbjct: 120 EGKEKAEINKKVVPVGGFFSGVISGLLGVGGGIINVPFLTWLGVPIHYAVATSSFAIIFT 179

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           +  + +              + LG V +  + +++P  I+   +  +++       L  G
Sbjct: 180 STSSAI------------KHYLLGNVELQWLPLLVPGLIIGAQIGARIAKRTKAGSLRRG 227

Query: 267 FSMIMFTTSFVF 278
           F+++M   +   
Sbjct: 228 FAIVMVILAIRM 239



 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V  F SG +SGL GVGGG++ VP L+           + +H A+ TS   I  TS  S +
Sbjct: 134 VGGFFSGVISGLLGVGGGIINVPFLTWL--------GVPIHYAVATSSFAIIFTSTSSAI 185

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +H   G + ++ L   +  L I   + + +        L + FAI  +++ I M+ +
Sbjct: 186 KHYLLGNVELQWLPLLVPGLIIGAQIGARIAKRTKAGSLRRGFAIVMVILAIRMILK 242


>gi|14590420|ref|NP_142486.1| hypothetical protein PH0518 [Pyrococcus horikoshii OT3]
 gi|3256923|dbj|BAA29606.1| 252aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 252

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 112/262 (42%), Gaps = 22/262 (8%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++D +   ++   ++GTL+ +FG+GGG ++VP L+           + +H A+GTS   I
Sbjct: 1   MLDLLLKSLITGLITGTLAAMFGLGGGFLLVPTLNIL--------GVEIHHAIGTSSASI 52

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T++ S   + +   I   I         I   + + + S +  S L   F I  + + 
Sbjct: 53  IFTALSSSYAYYKQKKIYYDIGIALASTAVIGAYIGAWLTSIISPSKLKVIFGITLIFVA 112

Query: 139 ILMLKRDRLYC--ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
             M+K+       E+         I G  +G LSG LGVGGGI     + + G  I+ A 
Sbjct: 113 YRMIKKKPAEEVKEKVRERRKWVPIGGFFSGVLSGLLGVGGGIINVPFLTWLGVPIHNAV 172

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           ATS+      +  + +              + LG V +  + +++P  I+   +  +++ 
Sbjct: 173 ATSSFAIIFTSTSSAIK------------HYLLGNVELYWLPLLVPGLIVGAQIGARIAK 220

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
               + L  GF+++M   +   
Sbjct: 221 KTKARSLKNGFAIVMLILAIRM 242



 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 8/99 (8%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP L+           + +H A+ TS   I  TS  S ++H   G + +  L   + 
Sbjct: 155 IINVPFLTWL--------GVPIHNAVATSSFAIIFTSTSSAIKHYLLGNVELYWLPLLVP 206

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            L +   + + +        L   FAI  L++ I M+ +
Sbjct: 207 GLIVGAQIGARIAKKTKARSLKNGFAIVMLILAIRMILK 245


>gi|212223719|ref|YP_002306955.1| hypothetical membrane protein, conserved [Thermococcus onnurineus
           NA1]
 gi|212008676|gb|ACJ16058.1| hypothetical membrane protein, conserved [Thermococcus onnurineus
           NA1]
          Length = 254

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 58/258 (22%), Positives = 104/258 (40%), Gaps = 25/258 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
                   G L+ LFG+GGG ++VP L+           + +H A+GTS   +  TS+ S
Sbjct: 7   YFTVGVFIGILAALFGLGGGFLIVPTLNLL--------GVEIHHAVGTSSAAVVFTSLSS 58

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + + R   I+ KI         I   + + M S +    L   F    +++ I + ++ 
Sbjct: 59  ALAYSRQKRIHYKIGLLLASTAVIGAYIGAWMTSFISAGMLKVIFGATLIIVAIRIYRKK 118

Query: 146 RLYCERKFPDNY-----VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
                    ++      +  I G   G  SG LGVGGGI     + + G  I+ A ATS+
Sbjct: 119 TAEPTEVRLEDVKVDYRLVPIGGFFAGIASGLLGVGGGIINVPFLTWLGLPIHYAVATSS 178

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                 A    +              ++LG V +  +++++P  I+   L  +++     
Sbjct: 179 FAIVFTATAGAI------------KHYTLGNVELHWLVLLIPGLIVGAQLGARIAKRTKA 226

Query: 261 KYLTIGFSMIMFTTSFVF 278
           K L   F+++M   +   
Sbjct: 227 KNLKNAFAVVMALLALRM 244



 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 8/120 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+ +  F +G  SGL GVGGG++ VP L+           + +H A+ TS   I  T+  
Sbjct: 136 LVPIGGFFAGIASGLLGVGGGIINVPFLTWL--------GLPIHYAVATSSFAIVFTATA 187

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             ++H   G + +  L   I  L +   + + +        L  AFA+   L+ + M+ +
Sbjct: 188 GAIKHYTLGNVELHWLVLLIPGLIVGAQLGARIAKRTKAKNLKNAFAVVMALLALRMILK 247


>gi|254371990|ref|ZP_04987483.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569721|gb|EDN35375.1| conserved hypothetical protein [Francisella novicida GA99-3549]
          Length = 262

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 100/232 (43%), Gaps = 2/232 (0%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP            +   M VA+ +++       +++ ++  ++  I    L+  +  
Sbjct: 31  INVPGFYLLLHYFYPINDHLMQVAIASAVSSGISVGLLATLKQHKYKQICYDTLRWAVIS 90

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + +  ++   +++ +  S L   F+I  ++MG  M ++ +   +       +K I   + 
Sbjct: 91  ILLGGILGVFLVTIIKSSDLKIVFSILLIIMGTWMWRKTKTTLKVWQAPLVLKSIGAFLA 150

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G  +   G+   +F   L+   G  I KA  TS  ++  I+    +  I  GW  + LPP
Sbjct: 151 GMFTMLSGI--SVFFVPLLTKCGLDIRKAIGTSTIITFFISLVMSIFFISFGWHASNLPP 208

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +S+G++N+   L  L  S++   +  K +     KYL I + ++MF  +   
Sbjct: 209 YSIGYLNLIIFLAGLIPSLIGVSIGVKATASFPHKYLQIIYILMMFIIAITM 260


>gi|325122306|gb|ADY81829.1| hypothetical protein BDGL_001243 [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 267

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 109/256 (42%), Gaps = 8/256 (3%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSLGVIAPT 81
           + +   LSG  + LFG GGG V VP+L         ++S      M +A+ TS  V+  +
Sbjct: 5   LFLFGLLSGITTWLFGFGGGFVAVPLLYTVIIQKWSNESNVGIHAMQIAVATSAFVMLCS 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  +   H + G I+ + ++     + +  +V +LM S  + ++L   F  +  +  I  
Sbjct: 65  ASFATFRHHQSGHIDWQKIRFLGGGIALGGIVGALMASLFNGNWLRWIFMGYVFITIIDC 124

Query: 142 LKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             R        +R+      + I G V G+++  LGVGG + T  L+   G+S+ +A A 
Sbjct: 125 YYRPGFMVTSVQRQHDGQNSELIKGGVIGWVAALLGVGGSVMTVPLLRRRGSSMAEAAAI 184

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++  ++  A L         +  P   +G +   A L ++  + +    + K    +
Sbjct: 185 ANILTLPLSLTATLTYCVLSIWQST-PNGFIGLIWFEAALFLVAGTWIGLYFSEKFISKL 243

Query: 259 GKKYLTIGFSMIMFTT 274
              +    + +++   
Sbjct: 244 PDLWRAKLYPLLLIIV 259


>gi|289193174|ref|YP_003459115.1| protein of unknown function DUF81 [Methanocaldococcus sp. FS406-22]
 gi|288939624|gb|ADC70379.1| protein of unknown function DUF81 [Methanocaldococcus sp. FS406-22]
          Length = 261

 Score =  122 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 7/261 (2%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + ++ L+I   F+ G L  LFG+GGG ++ P+L+  F   GI D +    A+GTSL V+ 
Sbjct: 4   ILFLPLLIFVGFIVGILGSLFGIGGGFLVAPILTFIFDYFGIPDGV--KFAVGTSLLVVF 61

Query: 80  PTSVMSFMEHRRHGTINMKI-LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             S++S   H +   IN K  +   +  L  + +   L+++ +D + L K F IF +   
Sbjct: 62  INSIVSIFRHAKIKNINWKASIIIGVISLVFSYISGFLVVNFIDSAMLKKLFGIFLISNA 121

Query: 139 ILMLKRDRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           I M K   +       DN   +I+ G+V GFLSG  G+GGGI    ++ F    + ++ A
Sbjct: 122 IYMAKSHHIDKISDREDNLAHFIFCGVVAGFLSGLFGIGGGIVIIPILTFAKYPVKRSVA 181

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            S GV  L +   L+  + +         +++G+V+I   LI+    I  + L  K++  
Sbjct: 182 ISVGVIPLTSIGGLISYLTA---NTNSYIYNIGYVSIPIALIMAIPIIYSSKLGIKINQK 238

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           I  K+L I  S I+ T   + 
Sbjct: 239 ISSKHLRIMLSAILGTMGLIM 259



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 19/130 (14%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF----YGAS--IYKATATSAGVSALIAFPA 210
            +    G + G L    G+GGG     ++ F    +G    +  A  TS  V  + +  +
Sbjct: 8   PLLIFVGFIVGILGSLFGIGGGFLVAPILTFIFDYFGIPDGVKFAVGTSLLVVFINSIVS 67

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL-ATKLSYMIGKKYLTIGFSM 269
           +                 +  +N  A +II  IS++ + +    +   I    L   F +
Sbjct: 68  IFRHA------------KIKNINWKASIIIGVISLVFSYISGFLVVNFIDSAMLKKLFGI 115

Query: 270 IMFTTSFVFA 279
            + + +   A
Sbjct: 116 FLISNAIYMA 125


>gi|57640914|ref|YP_183392.1| hypothetical protein TK0979 [Thermococcus kodakarensis KOD1]
 gi|57159238|dbj|BAD85168.1| hypothetical membrane protein, conserved, DUF81 family
           [Thermococcus kodakarensis KOD1]
          Length = 254

 Score =  122 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/258 (21%), Positives = 106/258 (41%), Gaps = 25/258 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +    + G L+ +FG+GGG ++VP L+           + +H A+GTS   +  TS+ S
Sbjct: 7   YLGVGIVIGILAAMFGLGGGFLIVPTLNFL--------GVEIHHAVGTSSAAVVFTSLSS 58

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + + R   I+ K          I   + +   S++  + L   F +   L+ I + ++ 
Sbjct: 59  AIAYHRQRRIHYKAGLLLASTAVIGAYIGAWATSYISAAQLKVIFGVVLFLVAIRLYRKK 118

Query: 146 RLYC-----ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
                    +    +  V  I G + G  SG LG+GGG      + + G  I+ A ATS+
Sbjct: 119 SREPHEVDLKEVKLNYKVVPIGGFIAGVASGLLGIGGGAINVPFLTYMGLPIHYAVATSS 178

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                 A    +              ++LG V +  +++++P  I+   L  K++     
Sbjct: 179 FAIVFTATSGAI------------KHYTLGNVEVEWLVLLVPGLIIGAQLGAKIAKRTKA 226

Query: 261 KYLTIGFSMIMFTTSFVF 278
             LT  F+++M   +   
Sbjct: 227 SQLTKAFAVVMAFLAIRM 244



 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +  F++G  SGL G+GGG + VP L+           + +H A+ TS   I  T+    +
Sbjct: 139 IGGFIAGVASGLLGIGGGAINVPFLTYM--------GLPIHYAVATSSFAIVFTATSGAI 190

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +H   G + ++ L   +  L I   + + +      S L KAFA+    + I M+ +
Sbjct: 191 KHYTLGNVEVEWLVLLVPGLIIGAQLGAKIAKRTKASQLTKAFAVVMAFLAIRMILK 247


>gi|15668617|ref|NP_247415.1| hypothetical protein MJ_0441 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2495987|sp|Q57883|Y441_METJA RecName: Full=UPF0721 transmembrane protein MJ0441
 gi|1591145|gb|AAB98428.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 267

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 78/270 (28%), Positives = 126/270 (46%), Gaps = 7/270 (2%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           MV   +   +  + L+I+  F+ G L  LFG+GGG ++ P+L+  F   GI D +    A
Sbjct: 1   MVIKLEFEFLLLLPLLIIVGFIVGILGSLFGIGGGFLVAPILTFIFDYFGIPDGV--KFA 58

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDW-IFVLPITTVVTSLMISHVDKSFLNKA 129
           +GTSL V+   S++S   H +   IN K      I  L  +     L+++ +D + L K 
Sbjct: 59  VGTSLFVVFINSIISIFRHAKIKNINWKASITIGIISLVFSYFSGFLVVNFIDSAILKKL 118

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFY 188
           F IF +   I M K   +       D    +I  G++TGFLSG  G+GGGI    ++   
Sbjct: 119 FGIFLIANAIYMAKSHHIDKISDREDKLEPFILCGVITGFLSGLFGIGGGIVIIPILAMA 178

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
              + +A A S GV  L +   L+  + +         +++G+V+I   LI+    I  +
Sbjct: 179 KYPVKRAVAISVGVIPLTSIGGLISYLTA---NTEGYIYNIGYVSIPIALIMAIPIIYSS 235

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            L  K++  I  K+L I  S I+       
Sbjct: 236 KLGIKINQKISPKHLRIMLSSILGVMGLFM 265



 Score = 42.4 bits (99), Expect = 0.077,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 43/127 (33%), Gaps = 19/127 (14%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF----YGAS--IYKATATSAGVSALIAFPALLV 213
            I G + G L    G+GGG     ++ F    +G    +  A  TS  V  + +  ++  
Sbjct: 17  IIVGFIVGILGSLFGIGGGFLVAPILTFIFDYFGIPDGVKFAVGTSLFVVFINSIISIFR 76

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL-ATKLSYMIGKKYLTIGFSMIMF 272
                          +  +N  A + I  IS++ +      +   I    L   F + + 
Sbjct: 77  HA------------KIKNINWKASITIGIISLVFSYFSGFLVVNFIDSAILKKLFGIFLI 124

Query: 273 TTSFVFA 279
             +   A
Sbjct: 125 ANAIYMA 131


>gi|312114505|ref|YP_004012101.1| hypothetical protein Rvan_1755 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311219634|gb|ADP71002.1| protein of unknown function DUF81 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 307

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 93/229 (40%), Gaps = 7/229 (3%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           LV+VP L     L+GI       +A  TSL ++ PT++ S   H   G + ++       
Sbjct: 29  LVVVPSLIYGLPLLGIFGPDVPRIATATSLALVIPTALASAQAHAAKGAVCLRCAVLLAP 88

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW--- 162
            L     + +++   +D   +   F ++ ++    +L+ +R            K +    
Sbjct: 89  ALITGAFLATMLAPFLDARMIVAVFVLYAIVFTWGVLRPERAKQAAALDRLGAKRLAETA 148

Query: 163 --GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
              +  G L+  LG GG  F   ++  +  S+ KA  T++ +   +A   +   + +   
Sbjct: 149 LKSVSGGALAALLGFGGAFFCVPILSRF-VSMKKAIGTASALGLPLAAAGVAGYLLAP-S 206

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             G      G + + AV  I   S+L  P+  +L++ +    L   F++
Sbjct: 207 PEGCSTACAGAIFMPAVGAIGVASVLTAPVGARLAHSLPVTLLKRVFAV 255



 Score = 40.4 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 20/133 (15%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
            G L+ L G GG    VP+LS+          + M  A+GT+  +  P +      +   
Sbjct: 154 GGALAALLGFGGAFFCVPILSRF---------VSMKKAIGTASALGLPLAAAGVAGYLLA 204

Query: 93  -----------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                      G I M  +        +T  V + +   +  + L + FA+  LL    +
Sbjct: 205 PSPEGCSTACAGAIFMPAVGAIGVASVLTAPVGARLAHSLPVTLLKRVFAVLLLLTAASL 264

Query: 142 LKRDRLYCERKFP 154
             +      R  P
Sbjct: 265 TLKITPAIPRPAP 277


>gi|84489169|ref|YP_447401.1| hypothetical protein Msp_0355 [Methanosphaera stadtmanae DSM 3091]
 gi|84372488|gb|ABC56758.1| conserved hypothetical membrane-spanning protein [Methanosphaera
           stadtmanae DSM 3091]
          Length = 268

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 2/261 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + YI L+++     G ++GL GVGGG+++ P+     Q +G++ SI + ++  TSL VI 
Sbjct: 4   IIYIVLLLIGGCFGGLMAGLLGVGGGIILSPIQYYLLQSIGVNPSIALPMSFATSLAVIF 63

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T +    EH R+G +  + LK  + +  I  +  + + +H+D + L+  F + C++  +
Sbjct: 64  VTMIRGTREHYRNGNVEDRFLKQMMILGFIGAICGAFISTHIDVTLLSFLFGVLCIVAVL 123

Query: 140 LMLKRDRLYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
            M+       +           + G   G L G LGVGGG+     +        +KA  
Sbjct: 124 NMILIKYPDNDENISKSKLGHSLLGFAAGLLCGLLGVGGGVIMIPALTILLKYPTHKAIG 183

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS+          L+  I  G  ++ LP +S+G+VNI   + +   S  +   A  LS  
Sbjct: 184 TSSASIIATTLGGLIAYIILGLNVSNLPQFSIGYVNILQFIFLTITSTFVVKYAADLSVR 243

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           I  + L I   +I+       
Sbjct: 244 IDARILKIFHIIIVGYIGLNM 264


>gi|304315031|ref|YP_003850178.1| hypothetical protein MTBMA_c12770 [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588490|gb|ADL58865.1| conserved hypothetical protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 259

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/259 (22%), Positives = 111/259 (42%), Gaps = 5/259 (1%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V YI  +++   ++G  +GL GVGGG ++ PVL    +  G  + I +  A  TSL VI 
Sbjct: 4   VFYIAALLLTGIVAGLATGLLGVGGGFIIAPVLFFLMESSGTPEDIAIRTAFATSLAVIL 63

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           P ++     H R G ++         +    +++  L  +      L   F +  +L+ +
Sbjct: 64  PAALTGAYSHYRRGCVDAGRAIPMGALGVCGSILGVLTATSSPAGVLRAIFGLLLILVSL 123

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            +L   R+       +  +   + +           GG +   LL+L  G  + +A  TS
Sbjct: 124 QLLLSSRISPSHGKRNAAISLGF-IAGFLSGLLGIGGGVVLVPLLVLVGGFDVLEAVGTS 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           + V A+ A    +  + SG G      +S+G+VN+   + I  +S+  + L    ++ I 
Sbjct: 183 SVVIAMTAASGTVSYLLSGPGGQ----FSVGYVNLVQFMAIAFMSVPASRLGVMAAHRID 238

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            +Y+   F  ++  T F  
Sbjct: 239 VRYIRYLFIALLLVTGFRM 257


>gi|312115507|ref|YP_004013103.1| hypothetical protein Rvan_2795 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220636|gb|ADP72004.1| protein of unknown function DUF81 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 307

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 93/229 (40%), Gaps = 7/229 (3%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           LV+VP L     L+GI       +A  TSL ++ PT++ S   H   G + ++       
Sbjct: 29  LVVVPSLIYGLPLLGISGPDVPRIATATSLALVIPTALASAQAHAAKGAVCLRCAALLAP 88

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER-----KFPDNYVKY 160
            L   + + + +   +D   +   F ++ ++    +L+ +R           F       
Sbjct: 89  ALITGSFLATTLAPFLDARMIVAVFVLYAIVFTWGVLRPERAKEAAVSDRLGFERLTETA 148

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
           +  +  G L+  LG GG  F   ++  +  S+ KA  T++ +   +A   +   + +   
Sbjct: 149 LKSVSGGALAALLGFGGAFFCVPILSRF-VSMKKAIGTASALGLPLAGAGVAGYLLAP-S 206

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             G      G + + AV  I   S+L  P+  +L++ +    L   F++
Sbjct: 207 PEGCSGACAGAIFMPAVGAIGVASVLTAPVGARLAHSLPVVLLKRVFAV 255



 Score = 40.4 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 45/133 (33%), Gaps = 20/133 (15%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
            G L+ L G GG    VP+LS+          + M  A+GT+  +  P +      +   
Sbjct: 154 GGALAALLGFGGAFFCVPILSRF---------VSMKKAIGTASALGLPLAGAGVAGYLLA 204

Query: 93  -----------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                      G I M  +        +T  V + +   +    L + FA+  LL    +
Sbjct: 205 PSPEGCSGACAGAIFMPAVGAIGVASVLTAPVGARLAHSLPVVLLKRVFAVLLLLTAASL 264

Query: 142 LKRDRLYCERKFP 154
             +      R  P
Sbjct: 265 TLKIMPAIPRPTP 277


>gi|18976740|ref|NP_578097.1| hypothetical protein PF0368 [Pyrococcus furiosus DSM 3638]
 gi|18892327|gb|AAL80492.1| hypothetical protein PF0368 [Pyrococcus furiosus DSM 3638]
          Length = 251

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/261 (21%), Positives = 105/261 (40%), Gaps = 25/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +     + G L+ +FG+GGG ++VP L+           + +H A+GTS   I  TS
Sbjct: 1   MIFLFFVGIVVGILAAMFGLGGGFLIVPTLNIL--------GVEIHSAIGTSSASIVFTS 52

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S + + R   I+ +          I   + + M S +  + L   F I  + +   + 
Sbjct: 53  LSSSIAYSRQRRIHYRAGILLASTAIIGAYIGAWMTSFLPSNQLKVIFGITLIFVAYRVY 112

Query: 143 KRDRLYC-----ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           ++  +       E    +  +  + G  +G  SG LGVGGGI     + + G  I+ A A
Sbjct: 113 RKKPVEPSEVKLEDIKLNEKLIPVGGFFSGIASGLLGVGGGIINVPFLTWLGMPIHYAVA 172

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS+      +    +              + LG V +  +  ++P  I+   +  +L+  
Sbjct: 173 TSSFAIVFTSLSGAI------------KHYMLGNVQLIWLPFLVPGLIIGAQIGARLAKK 220

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
              K L   FS++M   +   
Sbjct: 221 TRAKSLKGMFSVVMAILAVRM 241



 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 8/120 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI V  F SG  SGL GVGGG++ VP L+           + +H A+ TS   I  TS+ 
Sbjct: 133 LIPVGGFFSGIASGLLGVGGGIINVPFLTWL--------GMPIHYAVATSSFAIVFTSLS 184

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             ++H   G + +  L   +  L I   + + +        L   F++   ++ + M+ +
Sbjct: 185 GAIKHYMLGNVQLIWLPFLVPGLIIGAQIGARLAKKTRAKSLKGMFSVVMAILAVRMILK 244


>gi|242398129|ref|YP_002993553.1| Predicted permease [Thermococcus sibiricus MM 739]
 gi|242264522|gb|ACS89204.1| Predicted permease [Thermococcus sibiricus MM 739]
          Length = 254

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 102/254 (40%), Gaps = 25/254 (9%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G L+ LFG+GGG ++VP L+           + +H A+GTS   +  TS+ S + +
Sbjct: 11  GIFVGILAALFGLGGGFLVVPTLNLL--------GVEIHHAVGTSSAAVVFTSLSSAIAY 62

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
            R   I+ K          I   + + M S++  S L   F +   L+ I + ++     
Sbjct: 63  HRQRRIHYKAGLLLASTAVIGAYIGAWMTSYISASQLKVIFGVVLFLVAIRIYRKKSREP 122

Query: 150 ERKFPDNYVK-----YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
                +          I G + G  SG LG+GGG      + + G  I+ A ATS+    
Sbjct: 123 HEVDLNQVKLDYKIVPIGGFIAGIASGLLGIGGGAINVPFLTYMGLPIHYAVATSSFAIV 182

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
             A                L  + LG V +  +++++P  I+   L  K++       LT
Sbjct: 183 FTAISGA------------LKHYMLGNVEVEWLILLVPGLIVGAQLGAKIAKRTKASNLT 230

Query: 265 IGFSMIMFTTSFVF 278
             F++IM   +   
Sbjct: 231 KAFAVIMAFLAIRM 244



 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 8/117 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +  F++G  SGL G+GGG + VP L+           + +H A+ TS   I  T++   +
Sbjct: 139 IGGFIAGIASGLLGIGGGAINVPFLTYM--------GLPIHYAVATSSFAIVFTAISGAL 190

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +H   G + ++ L   +  L +   + + +      S L KAFA+    + I M+ +
Sbjct: 191 KHYMLGNVEVEWLILLVPGLIVGAQLGAKIAKRTKASNLTKAFAVIMAFLAIRMILK 247


>gi|240102618|ref|YP_002958927.1| putative permease [Thermococcus gammatolerans EJ3]
 gi|239910172|gb|ACS33063.1| Predicted permease [Thermococcus gammatolerans EJ3]
          Length = 254

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 105/258 (40%), Gaps = 25/258 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
                   G L+ LFG+GGG ++VP L+           + MH A+GTS   +  TS+ S
Sbjct: 7   YFAVGVFIGILAALFGLGGGFLVVPTLNLL--------GVEMHHAVGTSSAAVVFTSLSS 58

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + + R   I+ ++         I   + + + S +  S L   F +  +++ I + ++ 
Sbjct: 59  TIAYSRQKRIHYRVGLLLASTAVIGAYIGAWLTSFISASQLKVIFGLALVVVAIRIYRKK 118

Query: 146 RLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
               +         + ++  I G   G  SG LGVGGGI     + + G  I+ A ATS+
Sbjct: 119 TAEPQEVRLEDVRVNYWLVPIGGFFAGIASGLLGVGGGIINVPFLTYLGLPIHYAVATSS 178

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                 A                L  +++G V    +++++P  I+   L   ++     
Sbjct: 179 FAIVFTALAGA------------LKHYAMGNVETQWLVLLVPGLIIGAQLGAGIARRTKA 226

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F+++MF  +   
Sbjct: 227 SSLKKAFAIVMFLLALRM 244



 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ +  F +G  SGL GVGGG++ VP L+           + +H A+ TS   I  T++
Sbjct: 135 WLVPIGGFFAGIASGLLGVGGGIINVPFLTYL--------GLPIHYAVATSSFAIVFTAL 186

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              ++H   G +  + L   +  L I   + + +      S L KAFAI   L+ + M+ 
Sbjct: 187 AGALKHYAMGNVETQWLVLLVPGLIIGAQLGAGIARRTKASSLKKAFAIVMFLLALRMIL 246

Query: 144 R 144
           +
Sbjct: 247 K 247


>gi|15678902|ref|NP_276019.1| hypothetical protein MTH882 [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2621976|gb|AAB85380.1| conserved protein [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 261

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 57/259 (22%), Positives = 112/259 (43%), Gaps = 5/259 (1%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + Y+  ++    L+G  +GL GVGGG ++ PVL    +  G    I +  A GTSL +I 
Sbjct: 6   LIYVAALLFTGLLAGLATGLLGVGGGFIIAPVLFFLMEAGGTPPDIAIRTAFGTSLAIIL 65

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           PT++     H R   ++ +I      +    +V      S      L   F +  +L+  
Sbjct: 66  PTALSGAHSHYRRKCVDSRIGITMGVLGACGSVAGVFTASASPAYVLRAFFGVLLILVSA 125

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            +L   R+       +      + +           GG +   LL++  G  + +A  TS
Sbjct: 126 QLLLSSRISPSGFGRNAAFPLGF-LAGFLSGLLGIGGGVVLVPLLVMVAGFDVLEAVGTS 184

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           + V A  A    +  I++G G     P+++G+VN+   L+++ +S+  + L   +++ + 
Sbjct: 185 SLVIAFTAASGTISYIFTGPGG----PFTVGYVNLLQFLLVIVMSVPSSRLGALIAHRVD 240

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            +Y+   F +++  T    
Sbjct: 241 VRYIRYIFIILLLFTGLKM 259


>gi|315230493|ref|YP_004070929.1| hypothetical protein TERMP_00729 [Thermococcus barophilus MP]
 gi|315183521|gb|ADT83706.1| hypothetical protein TERMP_00729 [Thermococcus barophilus MP]
          Length = 254

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 54/260 (20%), Positives = 105/260 (40%), Gaps = 25/260 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
                   + G L+ LFG+GGG ++VP L+           + +H A+GTS   +  TS+
Sbjct: 5   ISYFAVGVVIGILAALFGLGGGFLIVPTLNLL--------GVEIHHAVGTSSAAVVFTSL 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + R   ++ K+         I   + + M S ++ + L   F    +L+ I + +
Sbjct: 57  SSALAYSRQKRVHYKVGLLLASTAIIGAYIGAWMTSLLNPAQLKVIFGATLILVAIRIYR 116

Query: 144 RDRLYCERKFPDNY-----VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           +          ++      +  + G   G  SG LGVGGGI     +++ G  I+ A AT
Sbjct: 117 KKTAEPSEVKLEDVKINYKLVPVGGFFAGIASGLLGVGGGIINVPFLVWLGMPIHYAVAT 176

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+      A    +              + +G V    +++++P  I+   L  K++   
Sbjct: 177 SSFAIVFTAASGAIK------------HYMMGNVEAQWLVLLVPGLIIGAQLGAKIAKRT 224

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++++   +   
Sbjct: 225 KASNLKRAFAVVLALLALRM 244



 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 8/120 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+ V  F +G  SGL GVGGG++ VP L            + +H A+ TS   I  T+  
Sbjct: 136 LVPVGGFFAGIASGLLGVGGGIINVPFLVWL--------GMPIHYAVATSSFAIVFTAAS 187

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             ++H   G +  + L   +  L I   + + +      S L +AFA+   L+ + M+ +
Sbjct: 188 GAIKHYMMGNVEAQWLVLLVPGLIIGAQLGAKIAKRTKASNLKRAFAVVLALLALRMILK 247


>gi|241668519|ref|ZP_04756097.1| hypothetical protein FphipA2_07121 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254877053|ref|ZP_05249763.1| predicted protein [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254843074|gb|EET21488.1| predicted protein [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 270

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 8/239 (3%)

Query: 48  MVPVLSKAFQLMGID-DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +VP++     +      S  MHVA+ TSL V+  TS ++   H +   I  ++     F 
Sbjct: 30  IVPLMMTFMTIYEPAYSSNAMHVAIATSLFVMIFTSSITTYSHHKSNNIIWEVAIPLKFG 89

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF-------PDNYVK 159
           + I  ++ ++  S +  + L   F IF +   +    +                P   + 
Sbjct: 90  VIIGAILGAIFASFLPGNILKIFFIIFLIYTIVKWAIKSFAKKSTNNNNANRLNPKKIIS 149

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            I+G  TG ++  LG+G  +     +     ++ +A A +A V+  IA       I +G 
Sbjct: 150 VIYGGFTGAIAVLLGIGASVMIVPFLKHKNFTMGQAAAIAAAVTPFIALLGASTYIITGL 209

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             + LP + LG+V I A + ++  S+L  P+ T+LS +I        + + +     V 
Sbjct: 210 SESALPKFCLGYVYIPAAIGMIFGSLLGAPIGTRLSSVIPHVVQNTIYFLFLIIIFLVM 268


>gi|161830359|ref|YP_001597179.1| hypothetical protein COXBURSA331_A1485 [Coxiella burnetii RSA 331]
 gi|161762226|gb|ABX77868.1| putative membrane protein [Coxiella burnetii RSA 331]
          Length = 263

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 112/262 (42%), Gaps = 3/262 (1%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +   I   I     +G + G+FG G GLVM P      +   +     M +A+ T+  V
Sbjct: 2   DIFLLIIDCIALGIGAGLVYGIFGGGSGLVMTPGFYYVLRHFELAQGYQMQIAIATTAAV 61

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
            A   + +     ++  I++ I K     L + T++  ++++ V  ++L + F +  +L+
Sbjct: 62  SALLGISATRVQWQNNLIDLSIFKKIFPGLLVGTLLAIILLNIVPSAYLKRLFGLVVILV 121

Query: 138 GILMLKRDRLYCERKFPD-NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
            + +    +    + +   ++   I   + G L   LG+   +FT   +   G  + +A 
Sbjct: 122 AVWLGFYHQDRDTKTWSLFSFCNRIMTTIIGLLWFLLGI--AVFTVPYLHKCGVDLRRAI 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +   S + +  A  + I +G    G+    +GFVNI   +I L  S L     +KLS 
Sbjct: 180 GCATLTSTVFSAIAASLLIVTGLFKVGISGNHIGFVNIPLSIIALIPSALAAHWGSKLSV 239

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            + K +L I ++ ++     + 
Sbjct: 240 KLPKFHLKIVYAGLLCVVGVLM 261


>gi|240102617|ref|YP_002958926.1| putative permease [Thermococcus gammatolerans EJ3]
 gi|239910171|gb|ACS33062.1| Predicted permease [Thermococcus gammatolerans EJ3]
          Length = 243

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 104/257 (40%), Gaps = 22/257 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +     G ++GL GVGGG ++VP L              +H+A+GTSL  I  +S+
Sbjct: 5   LLDFIVGLSIGFIAGLLGVGGGFLIVPTLVLL--------GEPIHLAIGTSLTCIVLSSL 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + H R G +  +++           V+ + + S + +  L   FA   L +   M +
Sbjct: 57  SASLTHIRRGAVLYRVVLLKEVFSAPFAVLGAYLSSRLPERGLRLVFAFLLLYLAYTMAR 116

Query: 144 RD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAG 201
           +  R + E          + G+++G +SG LG+ GG+    L   F G  +  A  TS+ 
Sbjct: 117 KKCRPHDEEGAVHYSRVPLVGILSGLVSGLLGISGGVLNVPLFHTFVGIPMRYAVGTSSF 176

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
                A    +              + LG V++    ++ P  I+   L    ++ +  K
Sbjct: 177 ALFFTALAGAI------------EHYRLGQVDLHMAFLLAPGLIIGGRLGALTAHRVHPK 224

Query: 262 YLTIGFSMIMFTTSFVF 278
            L   F+ ++   +   
Sbjct: 225 TLRRAFAGVLILVALRM 241



 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 7/116 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +   LSG +SGL G+ GG++ VP+       +GI     M  A+GTS   +  T++   +
Sbjct: 135 LVGILSGLVSGLLGISGGVLNVPLFH---TFVGIP----MRYAVGTSSFALFFTALAGAI 187

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           EH R G +++ +       L I   + +L    V    L +AFA   +L+ + ML 
Sbjct: 188 EHYRLGQVDLHMAFLLAPGLIIGGRLGALTAHRVHPKTLRRAFAGVLILVALRMLL 243



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 12/127 (9%)

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                + +I G+  GF++G LGVGGG      ++  G  I+ A  TS     L +  A L
Sbjct: 1   MLQYLLDFIVGLSIGFIAGLLGVGGGFLIVPTLVLLGEPIHLAIGTSLTCIVLSSLSASL 60

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             I              G V    VL+    S     L   LS  + ++ L + F+ ++ 
Sbjct: 61  THIRR------------GAVLYRVVLLKEVFSAPFAVLGAYLSSRLPERGLRLVFAFLLL 108

Query: 273 TTSFVFA 279
             ++  A
Sbjct: 109 YLAYTMA 115


>gi|29654630|ref|NP_820322.1| hypothetical membrane spanning protein [Coxiella burnetii RSA 493]
 gi|153208945|ref|ZP_01947158.1| putative membrane protein [Coxiella burnetii 'MSU Goat Q177']
 gi|154706451|ref|YP_001424768.1| hypothetical membrane spanning protein [Coxiella burnetii Dugway
           5J108-111]
 gi|165924104|ref|ZP_02219936.1| putative membrane protein [Coxiella burnetii RSA 334]
 gi|212218744|ref|YP_002305531.1| hypothetical membrane spanning protein [Coxiella burnetii
           CbuK_Q154]
 gi|29541898|gb|AAO90836.1| hypothetical membrane spanning protein [Coxiella burnetii RSA 493]
 gi|120575603|gb|EAX32227.1| putative membrane protein [Coxiella burnetii 'MSU Goat Q177']
 gi|154355737|gb|ABS77199.1| hypothetical membrane spanning protein [Coxiella burnetii Dugway
           5J108-111]
 gi|165916460|gb|EDR35064.1| putative membrane protein [Coxiella burnetii RSA 334]
 gi|212013006|gb|ACJ20386.1| hypothetical membrane spanning protein [Coxiella burnetii
           CbuK_Q154]
          Length = 263

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 112/262 (42%), Gaps = 3/262 (1%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +   I   I     +G + G+FG G GLVM P      +   +     M +A+ T+  V
Sbjct: 2   DIFLLIIDCIALGIGAGLVYGIFGGGSGLVMTPGFYYVLRHFELAQGYQMQIAIATTAAV 61

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
            A   + +     ++  I++ I K     L + T++  ++++ V  ++L + F +  +L+
Sbjct: 62  SALLGISATRVQWQNNLIDLSIFKKIFPGLLVGTLLAIILLNIVPSAYLKRLFGLVVILV 121

Query: 138 GILMLKRDRLYCERKFPD-NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
            + +    +    + +   ++   I   + G L   LG+   +FT   +   G  + +A 
Sbjct: 122 AVWLGFYHQDRDTKTWSLFSFCNRIMTTIIGLLWFLLGI--AVFTVPYLHKCGVDLRRAI 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +   S + +  A  + + +G    G+    +GFVNI   +I L  S L     +KLS 
Sbjct: 180 GCATLTSTVFSAIAASLLMVTGLFKVGISGNHIGFVNIPLSIIALIPSALAAHWGSKLSV 239

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            + K +L I ++ ++     + 
Sbjct: 240 KLPKFHLKIVYAGLLCVVGVLM 261


>gi|212212286|ref|YP_002303222.1| hypothetical membrane spanning protein [Coxiella burnetii
           CbuG_Q212]
 gi|212010696|gb|ACJ18077.1| hypothetical membrane spanning protein [Coxiella burnetii
           CbuG_Q212]
          Length = 263

 Score =  117 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 113/261 (43%), Gaps = 3/261 (1%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +   I   I     +G + G+FG G GLVM P      +   +  +  M +A+ T+  V 
Sbjct: 3   IFLLIIDCIALGIGAGLVYGIFGGGSGLVMTPGFYYVLRHFELAQAYQMQIAIATTAAVS 62

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           A   + +     ++  I++ I K     L + T++  ++++ V  ++L + F +  +L+ 
Sbjct: 63  ALLGISATRVQWQNNLIDLSIFKKIFPGLLVGTLLAIILLNIVPSAYLKRLFGLVVILVA 122

Query: 139 ILMLKRDRLYCERKFPD-NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           + +    +    + +   ++   I   + G L   LG+   +FT   +   G  + +A  
Sbjct: 123 VWLGFYHQDRDTKTWSLFSFCNRIMTTIIGLLWFLLGI--AVFTVPYLHKCGVDLRRAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +   S + +  A  + + +G    G+    +GFVNI   +I L  S L     +KLS  
Sbjct: 181 CATLTSTVFSAIAASLLMVTGLFKVGISGNHIGFVNIPLSIIALIPSALAAHWGSKLSVK 240

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           + K +L I ++ ++     + 
Sbjct: 241 LPKFHLKIVYAGLLCVVGVLM 261


>gi|264679263|ref|YP_003279170.1| permease [Comamonas testosteroni CNB-2]
 gi|262209776|gb|ACY33874.1| putative permease [Comamonas testosteroni CNB-2]
          Length = 302

 Score =  117 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 9/269 (3%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSI----CMHVA 70
           S +  V    L+ V    +G  + LFG GGG V+VP+L +         S      M +A
Sbjct: 27  SMEFFVSLYLLLAVCGCATGVTTVLFGFGGGFVVVPLLYRLLSAPNAPGSAVGQSAMQIA 86

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           + TS  V+   ++++   H+R GT++   ++  +  +    V+ +L  + V   +L  AF
Sbjct: 87  VATSTCVMVFGALLATWRHQRAGTVDWTNVRPLLGPIGAGAVLGALAATVVQSEWLRWAF 146

Query: 131 AIFCLLMGILMLKRD----RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
           A + +L  +    R     +    +  P      + G+V G+++  LGVGG + T  LM 
Sbjct: 147 AAYLVLTILDCWLRPGFLAQPSRMQHRPGPLANALSGLVIGWVAALLGVGGSVMTVPLMR 206

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN-GLPPWSLGFVNIGAVLIILPISI 245
             G  + +ATA +  +S  +A       I         L  W LG+++I A  +++  S 
Sbjct: 207 RRGIEMTRATAMANPLSLPVALAGTGTYIVLSAQSPLPLGEWHLGYIDIRAAAVLVAGSW 266

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +    A+     I  +     +  ++   
Sbjct: 267 IGIRAASLWIGRIPDRVHAKVYLGLLIAV 295


>gi|219127009|ref|XP_002183737.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404974|gb|EEC44919.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 2798

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 85/266 (31%), Gaps = 37/266 (13%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
                 +G L  L G+GGG VM+P+++     +        H A GTSL  ++ T V   
Sbjct: 51  FAIGGTAGVLGSLAGMGGGFVMIPLMTSRALRL------TQHQAHGTSLFAVSATGVAGA 104

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG----ILML 142
             +     +  +          +T  + + + +    + L KA  +  LLM         
Sbjct: 105 WSYVH--EVQWESAAAIALCGMVTARMGAHVTTRTSATTLRKALGVLMLLMAPAVPAKAY 162

Query: 143 KRDRLY------------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YG 189
              R                            G+ +GFL+G  GVGGG      +     
Sbjct: 163 LTQRAEATEASRAEAETMPSEPLSRFLPPAAIGLGSGFLAGLFGVGGGTIVVPALTLATD 222

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
            + Y+A ATS     L A                   +  G V +     +   S +   
Sbjct: 223 CTHYQALATSLAAMTLPALSGTYT------------HYRAGNVAVRIAPALALGSFVGAY 270

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTS 275
              KL   + +  L  GFS ++    
Sbjct: 271 TGGKLGLQLDETTLRWGFSGLLTILG 296


>gi|254171854|ref|ZP_04878530.1| conserved domain protein, putative [Thermococcus sp. AM4]
 gi|214033750|gb|EEB74576.1| conserved domain protein, putative [Thermococcus sp. AM4]
          Length = 254

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 104/258 (40%), Gaps = 25/258 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
                   G L+ LFG+GGG ++VP L+           + MH A+GTS   +  TS+ S
Sbjct: 7   YFAVGVFIGILAALFGLGGGFLIVPTLNLL--------GVEMHHAVGTSSAAVVFTSLSS 58

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + + R   I+ K+         I   + + + S +  S L   F +  +++ + + ++ 
Sbjct: 59  AIAYSRQRRIHYKVGLLLASTAVIGAYIGAWLTSFISASGLKVIFGLALIVVAVRIYRKK 118

Query: 146 RLYCERKFPDNY-----VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
                    ++      +  + G   G  SG LGVGGGI     + + G  I+ A ATS+
Sbjct: 119 TAEPSEVKLEDVRVNYKLVPVGGFFAGIASGLLGVGGGIINVPFLTYLGLPIHYAVATSS 178

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                 A    +              + +G V +  +++++P  I+   L   ++     
Sbjct: 179 FAIVFTAASGAI------------KHYMMGNVELHWLVLLVPGLIIGAQLGAGIAKRTKA 226

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F+++MF  +   
Sbjct: 227 SSLKKAFAVVMFLLALRM 244



 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 8/120 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+ V  F +G  SGL GVGGG++ VP L+           + +H A+ TS   I  T+  
Sbjct: 136 LVPVGGFFAGIASGLLGVGGGIINVPFLTYL--------GLPIHYAVATSSFAIVFTAAS 187

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             ++H   G + +  L   +  L I   + + +      S L KAFA+   L+ + M+ +
Sbjct: 188 GAIKHYMMGNVELHWLVLLVPGLIIGAQLGAGIAKRTKASSLKKAFAVVMFLLALRMILK 247


>gi|299531782|ref|ZP_07045184.1| putative permease [Comamonas testosteroni S44]
 gi|298720223|gb|EFI61178.1| putative permease [Comamonas testosteroni S44]
          Length = 302

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 61/269 (22%), Positives = 116/269 (43%), Gaps = 9/269 (3%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSI----CMHVA 70
           S +  V    L+ V   ++G  + LFG GGG V+VP+L +         S      M +A
Sbjct: 27  SLEFFVSLYLLLAVCGCVTGVTTVLFGFGGGFVVVPLLYRLLSAPNAPGSAVGQSAMQIA 86

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           + TS  V+   ++++   H+R GT++   ++  +  +    V+ +L  + V   +L  AF
Sbjct: 87  VATSTCVMVFGALLATWRHQRAGTVDWTNVRPLLGPIGAGAVLGALAATVVQSEWLRWAF 146

Query: 131 AIFCLLMGILMLKRD----RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
           A + +L  +    R     +   ++         + G+V G+++  LGVGG + T  LM 
Sbjct: 147 AAYLVLTILDCWLRPGFLAQPVAKQHRHGPLANALSGLVIGWVAALLGVGGSVMTVPLMR 206

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN-GLPPWSLGFVNIGAVLIILPISI 245
             G  + +ATA +  +S  +A       I         L  W LG+++I A  +++  S 
Sbjct: 207 RRGIEMTRATAMANPLSLPVALAGTGTYIVLSTQSPLPLGEWHLGYIDIRAAAVLVAGSW 266

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +    A+     I  +     +  ++   
Sbjct: 267 IGIRAASLWIGRIPDRVHAKVYLGLLIAV 295


>gi|269968534|ref|ZP_06182540.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269826869|gb|EEZ81197.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 226

 Score =  115 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 76/174 (43%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I   I A    G L+GL GVGGG + VP+ +  F L GI D+  +H+A+GTS+  +  T
Sbjct: 6   FIIYYITAGLGIGFLAGLVGVGGGGMAVPIFAFLFSLQGIADTEVVHLALGTSMASMIVT 65

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ S   H +   ++  ++   +  + + T   + + S++   +L   F++F L +   M
Sbjct: 66  TLGSMRAHYKKENVDSTMVVKMLSGVLVGTFCATFVASYLQGVYLAGFFSVFMLYVAYKM 125

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
                                G V G +S  + + G       ++     + ++
Sbjct: 126 FLNTENEYNPNPHGAIGNITVGSVIGSVSALVSISGAGLIIPYLVQQNFEVKRS 179


>gi|312136691|ref|YP_004004028.1| hypothetical protein Mfer_0466 [Methanothermus fervidus DSM 2088]
 gi|311224410|gb|ADP77266.1| protein of unknown function DUF81 [Methanothermus fervidus DSM
           2088]
          Length = 269

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 116/249 (46%), Gaps = 9/249 (3%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQ-LMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           TL+G+ GVGGG ++VP+     Q  +G+++S    +A  TSL    P  ++S  EH + G
Sbjct: 21  TLTGMLGVGGGFILVPIFFFLNQIFLGVNESFAFRMATATSLSTFIPN-MVSAYEHAQRG 79

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
           ++  K      F   I  ++ + +   +   FL   FA+  + + I +++          
Sbjct: 80  SVLWKEGTLIAFFGFIGGIIGATINLILPVKFLKIFFALLLVFLAIKLIRNVNPKTLTFQ 139

Query: 154 PDNYVKYI-----WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
            + ++  I      G++TG LSG  G+GGGI    L+   G  + K+  TS  V  + + 
Sbjct: 140 KNVFLNNISYLIPIGILTGILSGMFGIGGGIILVPLLTIIGFDLLKSIGTSTFVVTITSL 199

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
             +L+ I+S         +S+G+VN+   LII    +L      K++Y   KK L    +
Sbjct: 200 GGILIYIFS--TNAQNLSYSIGYVNLLQSLIINITGVLSVRFGVKMAYKYPKKVLKYVVA 257

Query: 269 MIMFTTSFV 277
           +++   +  
Sbjct: 258 ILLIIFAIK 266


>gi|268590380|ref|ZP_06124601.1| putative membrane protein [Providencia rettgeri DSM 1131]
 gi|291314292|gb|EFE54745.1| putative membrane protein [Providencia rettgeri DSM 1131]
          Length = 271

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 11/238 (4%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSLGVIA 79
            L+ +  F+SG  + LFG GGG + VP+L     L+    S    + M +A+ TS  V+ 
Sbjct: 3   LLLCLFGFISGITTALFGFGGGFITVPLLYALITLVWGPQSDAGSVAMQIAVATSTCVMI 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +S   H   G ++  I++ +I  + I  ++ +++   VD + +   F  + ++  +
Sbjct: 63  FSSTLSSRAHYLKGNLSWPIIRPFIIPISIGGILGAIVALSVDSALIRWIFIGYLIITIL 122

Query: 140 LMLKRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
               R                  +     G+V G ++  LGVGG + T  LM   GAS+ 
Sbjct: 123 DCFIRPGFMKTESIGIQASRGGIFADTPIGVVIGAVAAFLGVGGSVMTVPLMRRRGASMI 182

Query: 194 KATATSAGVSALIAFPALLVRIYSGWG-LNGLPPWSLGFVNIGAVLIILPISILITPL 250
           +A A +  ++  +A    L   Y        L    LG + I   LI++  S L    
Sbjct: 183 QAAAFANPLTLPMAITGTLTYFYFAIDKHIDLGAGFLGMIYIKGALILIVTSWLGIRF 240


>gi|303243462|ref|ZP_07329804.1| protein of unknown function DUF81 [Methanothermococcus okinawensis
           IH1]
 gi|302486023|gb|EFL48945.1| protein of unknown function DUF81 [Methanothermococcus okinawensis
           IH1]
          Length = 275

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 68/272 (25%), Positives = 125/272 (45%), Gaps = 14/272 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I  +++     G +SGL G+GGG ++VPVL   F  +GI   I + +A+GTSL VI 
Sbjct: 3   LIIIFSLVILGMFIGFISGLLGIGGGFIIVPVLIYLFDFIGIPTDISVKMAVGTSLFVIF 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMG 138
            TS+    +H  +  +  K            ++V   +++ ++  +     F IF + + 
Sbjct: 63  LTSLAGAHKHSLNKNVIWKYSLILGLFGIFGSIVGVNIVVGYLSGNLHKMLFGIFLIFVS 122

Query: 139 ILML---KRDRLYCERKFPDNYVKY--------IWGMVTGFLSGALGVGGGIFTNLLM-L 186
           + +L    +++         N            + G +TGFLS   G+GGGI     + +
Sbjct: 123 LHILYSNFKNKNNLSIIENRNISDIKCKCKDIGVVGFLTGFLSSVFGIGGGIIIVPFLNI 182

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           F    I  A  TS G+  +++F  LL  ++S    N    +++G+V++   LII P +++
Sbjct: 183 FLKFPIKSAIGTSLGMMIIVSFVGLLGYMFSSCPFNQN-IYNIGYVSLLTGLIISPTAMI 241

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +    K++Y    + L I  S+I+       
Sbjct: 242 FSKYGAKIAYKTKSESLRIVLSIILMIVGIKM 273



 Score = 35.8 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 18/126 (14%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V  FL+G LS +FG+GGG+++VP L+   +         +  A+GTSLG++   S +  +
Sbjct: 156 VVGFLTGFLSSVFGIGGGIIIVPFLNIFLKF-------PIKSAIGTSLGMMIIVSFVGLL 208

Query: 88  EH-----------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +              G +++           I +   + +        L    +I  ++
Sbjct: 209 GYMFSSCPFNQNIYNIGYVSLLTGLIISPTAMIFSKYGAKIAYKTKSESLRIVLSIILMI 268

Query: 137 MGILML 142
           +GI M+
Sbjct: 269 VGIKMI 274


>gi|307324943|ref|ZP_07604148.1| protein of unknown function DUF81 [Streptomyces violaceusniger Tu
           4113]
 gi|306889441|gb|EFN20422.1| protein of unknown function DUF81 [Streptomyces violaceusniger Tu
           4113]
          Length = 270

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 9/251 (3%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGID--DSICMHVAMGTSLG 76
           ++     ++    L+G  + LFG GGG + VPV+     +      D+  MH+A+ TS  
Sbjct: 1   MLTSFSTLLFLGCLTGITTVLFGFGGGFITVPVVYGVLTVTASPGRDADAMHIAVATSAA 60

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           V+   +  + +   R G +    +      + +  VV S   + +  + L   FA + L+
Sbjct: 61  VMVVNAAAAALAQWRQGRLRRAYVWPLAAFIAVGAVVGSFAATFIGGTALRLLFAAYLLV 120

Query: 137 MGILMLKRDRL-----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
                L R            +        + G+  G ++  LGVGG + T  L+   G  
Sbjct: 121 TIADSLLRKGFLSVAHQTRPEPLGRRTTTLGGIGIGLVAAGLGVGGSVMTVPLLRRRGLP 180

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           + +ATA +  +S  +A    LV   +        P  LG+V++ A   +L  S+    +A
Sbjct: 181 MAEATAMANPLSVPVALAGTLVYALA--PATSAGPGQLGYVDLTAGAALLIGSLPTIAVA 238

Query: 252 TKLSYMIGKKY 262
            +++  +  + 
Sbjct: 239 RRVTGRVPDRV 249


>gi|57640988|ref|YP_183466.1| hypothetical protein TK1053 [Thermococcus kodakarensis KOD1]
 gi|57159312|dbj|BAD85242.1| hypothetical membrane protein, conserved, DUF81 family
           [Thermococcus kodakarensis KOD1]
          Length = 243

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 23/259 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +   ++   + G ++GLFGVGGG ++VP L            + +H A+GTSL  I+ ++
Sbjct: 3   LITYLILGLVIGFVAGLFGVGGGFLLVPSLVIL--------GVPIHKAIGTSLACISISA 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H R G +  +++         + ++ + + SH+ +  L   F +  L + + ML
Sbjct: 55  LASAYTHLRSGRVLYRVVLLKEMFSIPSAILGAYLSSHLPERLLRVVFGVLLLYLAVAML 114

Query: 143 KRDRLYC--ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATS 199
           +  +  C  E+   +     + G+V+G +SG LGV GGI    L     G  I  A  TS
Sbjct: 115 RSKKGDCEMEKGKIEYRNVPLVGLVSGLVSGLLGVSGGILNVPLFHTLVGIPIKYAVGTS 174

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +      A                   W LG V    VL + P  I+   L  K    + 
Sbjct: 175 SLALLFTALAGTF------------EHWRLGHVQPNIVLFLAPGLIMGARLGAKTVSRVN 222

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            + L  GF+ ++   +   
Sbjct: 223 PRSLRAGFAALLAIVAVRM 241



 Score = 69.3 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +   +SG +SGL GV GG++ VP+             I +  A+GTS   +  T++    
Sbjct: 135 LVGLVSGLVSGLLGVSGGILNVPLFHTLV-------GIPIKYAVGTSSLALLFTALAGTF 187

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           EH R G +   I+      L +   + +  +S V+   L   FA    ++ + ML 
Sbjct: 188 EHWRLGHVQPNIVLFLAPGLIMGARLGAKTVSRVNPRSLRAGFAALLAIVAVRMLL 243


>gi|261402307|ref|YP_003246531.1| protein of unknown function DUF81 [Methanocaldococcus vulcanius M7]
 gi|261369300|gb|ACX72049.1| protein of unknown function DUF81 [Methanocaldococcus vulcanius M7]
          Length = 261

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 7/261 (2%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + ++ ++++  F+ G    L G+GGG ++ PVL+  F   GI D I    A+GTSL V+ 
Sbjct: 4   LLFVPILVIIGFIIGIFGSLLGIGGGFLVAPVLTFIFDYFGIPDGI--KFAVGTSLLVVF 61

Query: 80  PTSVMSFMEHRRHGTINMKI-LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             S++S   H R   IN K  L   +  L  + +   L++  +  + L K F +F ++  
Sbjct: 62  INSIISIFRHSRIRNINWKASLIVGLTSLIFSYLSGMLVVHFIASNILKKIFGVFLIVNS 121

Query: 139 ILMLKRDRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           I + K   +   ++  +  V +I+ G+V GFLSG  G+GGGI    L+      I +AT 
Sbjct: 122 IYLAKSQHIDKIKEREEKIVHFIFCGVVAGFLSGLFGIGGGIVIIPLLTLIKYPIKRATL 181

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            S     + +   L+  + +         +++G+V++   LII    +  + L  K+S +
Sbjct: 182 ISISAVPITSLGGLISYLTANTNE---YIYNIGYVSVPIALIIAVPILYSSKLGIKISQV 238

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           I  K+L    S I+     V 
Sbjct: 239 IEPKHLRSVLSAILGVIGVVM 259



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 19/116 (16%)

Query: 171 GALGVGGGIFTNLLMLF----YGAS--IYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
             LG+GGG     ++ F    +G    I  A  TS  V  + +  ++             
Sbjct: 22  SLLGIGGGFLVAPVLTFIFDYFGIPDGIKFAVGTSLLVVFINSIISIFR----------- 70

Query: 225 PPWSLGFVNIGAVLIILPISILITPL-ATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
               +  +N  A LI+   S++ + L    + + I    L   F + +   S   A
Sbjct: 71  -HSRIRNINWKASLIVGLTSLIFSYLSGMLVVHFIASNILKKIFGVFLIVNSIYLA 125


>gi|126465319|ref|YP_001040428.1| hypothetical protein Smar_0408 [Staphylothermus marinus F1]
 gi|126014142|gb|ABN69520.1| protein of unknown function DUF81 [Staphylothermus marinus F1]
          Length = 250

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 27/263 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+ + +   G +S + G+GGG +M+P +           +  +  A+ TSL  I  TS
Sbjct: 4   LILLFLGALGIGFVSAIVGIGGGTLMIPFMVLIL-------NYDVKEAIATSLVSIIVTS 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R   +++K             +V + +   +    +  AF++  L + I ML
Sbjct: 57  SSASSIYLRRRDVDLKTAFLLEPSTAAGAIVGAYLTISLPTRIVETAFSLLLLYVSISML 116

Query: 143 K---RDRLYCERKFPDNYVKYIWGMVTGFL----SGALGVGGGIFTNLLMLF-YGASIYK 194
           +   R +      +  +  +   G++  FL    SG LG+GGG+    LM    G  I  
Sbjct: 117 RDALRRKEIETGNYKVSRQRRGVGVLIAFLAGLTSGMLGIGGGVLKVPLMTMVLGLPIRT 176

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A ATS+ +  L A    LV +              G+VN  AV  +    I    L   +
Sbjct: 177 AIATSSFMVGLTASAGSLVYLLK------------GYVNPYAVASLALGIIPGATLGAHM 224

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              I  + L I FS+ +   S  
Sbjct: 225 LKKISPRILKIIFSVTLMYASIK 247



 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 52/116 (44%), Gaps = 7/116 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++ +FL+G  SG+ G+GGG++ VP+++           + +  A+ TS  ++  T+    
Sbjct: 141 VLIAFLAGLTSGMLGIGGGVLKVPLMTMVL-------GLPIRTAIATSSFMVGLTASAGS 193

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +   G +N   +      +     + + M+  +    L   F++  +   I +L
Sbjct: 194 LVYLLKGYVNPYAVASLALGIIPGATLGAHMLKKISPRILKIIFSVTLMYASIKLL 249



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 46/122 (37%), Gaps = 13/122 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIY 216
           + ++  +  GF+S  +G+GGG      M+      + +A ATS     + +  A  + + 
Sbjct: 6   LLFLGALGIGFVSAIVGIGGGTLMIPFMVLILNYDVKEAIATSLVSIIVTSSSASSIYLR 65

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                          V++    ++ P +     +   L+  +  + +   FS+++   S 
Sbjct: 66  R------------RDVDLKTAFLLEPSTAAGAIVGAYLTISLPTRIVETAFSLLLLYVSI 113

Query: 277 VF 278
             
Sbjct: 114 SM 115


>gi|70731869|ref|YP_261611.1| hypothetical protein PFL_4527 [Pseudomonas fluorescens Pf-5]
 gi|68346168|gb|AAY93774.1| membrane protein, putative [Pseudomonas fluorescens Pf-5]
          Length = 296

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 60/267 (22%), Positives = 114/267 (42%), Gaps = 10/267 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSK-AFQLMGIDDSI---CMHVAMGTSLGV 77
           +  L+ +   ++G  + LFG GGG V+VP+L        G D ++    MHVA+ TS  V
Sbjct: 27  FYLLLALFGCMTGISAVLFGFGGGFVVVPLLYWMLLGSQGADSAVGQAAMHVAVATSTCV 86

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +   ++++   H+R G +  + L      + +  +V +     V    +  AF  +  L 
Sbjct: 87  MIVNALVATGRHQRAGNLVRRYLWPLGGYIGLGAIVGAAGAMWVSGEVIRYAFIAYLGLT 146

Query: 138 GILMLKRD-----RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
               L R       +  + +   +      G+  G ++  LGVGG + T  L+   G S+
Sbjct: 147 IADCLLRRGFLEQSVGQKTRDLGSGETLFGGVGIGVIATFLGVGGSVMTVPLLRRCGLSM 206

Query: 193 YKATATSAGVSALIAFPALLVRI-YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
            +AT+ +  +S  +A       +  +G+    L PW +G+V++ A  ++   S+L   LA
Sbjct: 207 TQATSMANPLSVPVALAGTATYMALAGYSRFDLGPWFVGYVDLLAFFVLTLGSLLGIRLA 266

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 I  +     +  ++F      
Sbjct: 267 APWIGRIPDRVHARVYIGLLFLVLLSM 293


>gi|312113843|ref|YP_004011439.1| hypothetical protein Rvan_1067 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311218972|gb|ADP70340.1| protein of unknown function DUF81 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 304

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 92/229 (40%), Gaps = 10/229 (4%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           LV+VP L     L+GI       +A  TSL ++ PT++ S   H   G + ++       
Sbjct: 29  LVVVPSLIYGLPLLGISGPDVPKIATATSLALVIPTALASAQAHAAKGAVCLRCAALLAP 88

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW--- 162
            L     + +++   +D   +   F ++ ++    +L+ +R            K +    
Sbjct: 89  ALIAGAFLATMLAPFLDARMIVAVFVLYAIVFTWGVLRPERARAAATPDRLGAKRLAETA 148

Query: 163 --GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
              +  G L+  LG GG  F   ++  +  S+ KA  T++ +   +A   +   + +   
Sbjct: 149 LKSVSGGALAALLGFGGAFFCVPILSRF-VSMKKAIGTASALGLPLAAAGVAGYLLAP-S 206

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             G      G + + A   I   S+L  P+  +L++ +    L   F++
Sbjct: 207 PEGCSTACAGAIFMPA---IGVASVLTAPVGARLAHSLPVALLKRVFAV 252



 Score = 37.0 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 23/133 (17%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
            G L+ L G GG    VP+LS+          + M  A+GT+  +  P +      +   
Sbjct: 154 GGALAALLGFGGAFFCVPILSRF---------VSMKKAIGTASALGLPLAAAGVAGYLLA 204

Query: 93  -----------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                      G I M  +        +T  V + +   +  + L + FA+  LL    +
Sbjct: 205 PSPEGCSTACAGAIFMPAI---GVASVLTAPVGARLAHSLPVALLKRVFAVLLLLTAASL 261

Query: 142 LKRDRLYCERKFP 154
             +      R  P
Sbjct: 262 TLKITPQIPRPAP 274


>gi|15616016|ref|NP_244321.1| hypothetical protein BH3454 [Bacillus halodurans C-125]
 gi|10176077|dbj|BAB07173.1| BH3454 [Bacillus halodurans C-125]
          Length = 273

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 56/273 (20%), Positives = 103/273 (37%), Gaps = 32/273 (11%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    L+GT+  L G+GGG+++VP L        + +++   VA+GTSL ++  T + 
Sbjct: 5   ILVCVGLLAGTIGSLMGLGGGIIVVPALLWLGGTALLSEAVTPQVAVGTSLLIMIFTGLS 64

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S   + + GT++ K    +        +V   +   +        F +F +LM  L++ R
Sbjct: 65  STFAYMKKGTVDYKSGLIFFIGSGPGALVGVWLNQGLQVQQFQIYFGLFVILMSFLLMIR 124

Query: 145 DRLYCERKFPDN-------------------YVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
            RL                            ++  +     G LSG  G+GGG      M
Sbjct: 125 HRLKPMEIKKKGIRRVYVDPEGQRYDYGFQAWLGILIAFFVGLLSGLFGIGGGTLLVPAM 184

Query: 186 -LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
            L +    + A ATS            +  I     L+ L   +LG VN      ++P +
Sbjct: 185 ILLFAFPPHVAVATS------------MFMIIFTALLSSLSHLALGNVNWLFAAGLVPGA 232

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            +   L   L+  +    +   F + +      
Sbjct: 233 WIGAKLGAILNTRLKSDTIVFVFRLFLLFVGLR 265



 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 7/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I+ +F  G LSGLFG+GGG ++VP +   F       +   HVA+ TS+ +I  T++
Sbjct: 156 WLGILIAFFVGLLSGLFGIGGGTLLVPAMILLF-------AFPPHVAVATSMFMIIFTAL 208

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +S + H   G +N       +    I   + +++ + +    +   F +F L +G+ ++ 
Sbjct: 209 LSSLSHLALGNVNWLFAAGLVPGAWIGAKLGAILNTRLKSDTIVFVFRLFLLFVGLRLIY 268



 Score = 41.2 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 43/128 (33%), Gaps = 20/128 (15%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG--------ASIYKATATSAGVSALIAF 208
           ++    G++ G +   +G+GGGI     +L+ G         +   A  TS  +      
Sbjct: 4   FILVCVGLLAGTIGSLMGLGGGIIVVPALLWLGGTALLSEAVTPQVAVGTSLLIMIFTGL 63

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            +    +  G             V+  + LI    S     +   L+  +  +   I F 
Sbjct: 64  SSTFAYMKKGT------------VDYKSGLIFFIGSGPGALVGVWLNQGLQVQQFQIYFG 111

Query: 269 MIMFTTSF 276
           + +   SF
Sbjct: 112 LFVILMSF 119


>gi|124485177|ref|YP_001029793.1| hypothetical protein Mlab_0350 [Methanocorpusculum labreanum Z]
 gi|124362718|gb|ABN06526.1| protein of unknown function DUF81 [Methanocorpusculum labreanum Z]
          Length = 268

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 121/262 (46%), Gaps = 6/262 (2%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +IC++I    L+G +SGL GVGGG +  PV+    +  G+ D + + VA GTSL    PT
Sbjct: 5   FICILIGTGLLAGFMSGLLGVGGGFLYAPVMYFVLRHSGVPDDMAILVAFGTSLAAAFPT 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            +   + H + G +  +          +T  +   + +++    L   F++  +L  I +
Sbjct: 65  VLTGAVGHTKKGNVVWRDAFIMGLCGTVTGFIGGTVATYLPVQILTILFSVMLILGAIRL 124

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSA 200
           +         + P   +    G   GF+SG LGVGGG     LM+  G  S+ KA ATS+
Sbjct: 125 VTCLPSGTGERMP-APLAGGIGGTAGFMSGLLGVGGGTILVPLMVLLGKFSMKKAAATSS 183

Query: 201 GVSALIAFPALLVRIYSGW----GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
                I    +L  + +G+     L+    + +G++++    I++  +I +   A ++S 
Sbjct: 184 AAIVFITLGGILSYLVNGFSAGINLSEYGFYLIGYIDVMMWAILVITAIPMVLFAVRISC 243

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            + + +L   F ++M   +   
Sbjct: 244 RVPEVWLRRIFFILMLVIAIRM 265



 Score = 38.1 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 9/124 (7%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKA--FQLMGIDDSICMHVAMGTS--LGVIAPTSVM- 84
              +G +SGL GVGGG ++VP++     F +     +    +   T   +          
Sbjct: 145 GGTAGFMSGLLGVGGGTILVPLMVLLGKFSMKKAAATSSAAIVFITLGGILSYLVNGFSA 204

Query: 85  ----SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
               S       G I++ +    +       +    +   V + +L + F I  L++ I 
Sbjct: 205 GINLSEYGFYLIGYIDVMMWAILVITAIPMVLFAVRISCRVPEVWLRRIFFILMLVIAIR 264

Query: 141 MLKR 144
           ML  
Sbjct: 265 MLLP 268


>gi|332969423|gb|EGK08447.1| protein of hypothetical function DUF81 [Desmospora sp. 8437]
          Length = 273

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 57/275 (20%), Positives = 110/275 (40%), Gaps = 31/275 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L +V   +SGT+  + G+GGG++ VP L      +   + I   +A+GTSL ++  T+
Sbjct: 5   LILFLVIGLVSGTVGTIVGLGGGIITVPALLFLASHLSEAEHITPQMAVGTSLVLVIITA 64

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM- 141
           + S + + R   ++        +      ++ + +  +   S     F +  + + +L+ 
Sbjct: 65  LSSTLSYARQQRVDFSSGWSLFWGSGPGAILGAWLTRYFAGSLFFIVFGVLMIGIALLLT 124

Query: 142 ------LKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
                 ++R +   +R+F D             +    G V G LSG  G+GGG     L
Sbjct: 125 LGDRLKVRRVKWSVQREFKDAEGNIYRYGYHRTIALTCGFVVGLLSGLFGIGGGALLVPL 184

Query: 185 M-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           M L +    + ATATS  V  L +    +  ++             G +   AVL+I P 
Sbjct: 185 MVLLFRFPPHVATATSMFVIFLSSISGSITHLFQ------------GNIEWMAVLLIAPG 232

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           + +   L   +S  +    L     + +   +   
Sbjct: 233 AWVGGRLGAWISRKMSSTALMWALKLAIAVVAIRM 267



 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            + +   F+ G LSGLFG+GGG ++VP++   F+          HVA  TS+ VI  +S+
Sbjct: 157 TIALTCGFVVGLLSGLFGIGGGALLVPLMVLLFRF-------PPHVATATSMFVIFLSSI 209

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              + H   G I    +        +   + + +   +  + L  A  +   ++ I M+
Sbjct: 210 SGSITHLFQGNIEWMAVLLIAPGAWVGGRLGAWISRKMSSTALMWALKLAIAVVAIRMI 268


>gi|326404086|ref|YP_004284168.1| hypothetical protein ACMV_19390 [Acidiphilium multivorum AIU301]
 gi|325050948|dbj|BAJ81286.1| hypothetical protein ACMV_19390 [Acidiphilium multivorum AIU301]
          Length = 271

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 56/246 (22%), Positives = 102/246 (41%), Gaps = 10/246 (4%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLM----GIDDSICMHVAMGTSLGVIA 79
            ++ V   LSG  + LFG GGG V+VP+L     +            MHVA+ TS  V+ 
Sbjct: 5   LILTVFGVLSGVTTVLFGFGGGFVIVPLLFSILTVDLGRGTSASPAAMHVAVATSTAVMV 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S M+ M H R G +    L      + I   + +++ +      +  AF  +  +  +
Sbjct: 65  VNSFMATMRHARLGNLVAAELWPLAGYIAIGAGIGAMLATSASDDVMRWAFVAYLGVTIL 124

Query: 140 LMLKR----DRLYCERKFPDNYVKY--IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
             L R     R   +   P    ++  + G++ G ++  LGVGG + T  +    G  + 
Sbjct: 125 DCLLRRGFLSRAADDGPLPRMPAQFTAVAGIIIGTIATFLGVGGSVMTVPMNRRRGMDMT 184

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +ATA +  ++  +A     + +        +  W +G V+  A ++++  S+L    A  
Sbjct: 185 RATAMATPLTLPVALIGAGIYMLLPADAVAVSQWQVGSVDGLAFVVLVIGSLLGIRAAAP 244

Query: 254 LSYMIG 259
               I 
Sbjct: 245 FIGRIP 250


>gi|315230494|ref|YP_004070930.1| hypothetical protein TERMP_00730 [Thermococcus barophilus MP]
 gi|315183522|gb|ADT83707.1| hypothetical protein TERMP_00730 [Thermococcus barophilus MP]
          Length = 251

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 22/232 (9%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL+           + +H A+GTSL  I+ +++ S   H R   +  +++        
Sbjct: 30  VPVLTLL--------GLPIHEAIGTSLACISMSALASAYGHLRRKNVLFRVVVIKEAFSI 81

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR-LYCERKFPDNYVKY-IWGMVT 166
            + ++ + + + ++   L+  F    + +   ++K+      +R    +Y K  + G+V+
Sbjct: 82  PSALLGAYITAFLNTRQLSAIFGFALIYVAYKLIKKPETPSVKRNVKVDYRKVPVIGVVS 141

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           GF SG LG+ GGI    L    G  I+ A  TS+      A    +              
Sbjct: 142 GFSSGLLGISGGILNVPLFYSLGLPIHYAIGTSSVALFFTALAGTVG------------H 189

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           + LG V+    +++ P  IL      +L++ I  + L +GFS+I+   +   
Sbjct: 190 YILGQVHFDKAILLAPGLILGGFSGARLAHEIHPERLKMGFSLILLIIAIRM 241



 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 8/117 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V   +SG  SGL G+ GG++ VP+             + +H A+GTS   +  T++   +
Sbjct: 136 VIGVVSGFSSGLLGISGGILNVPLFYSL--------GLPIHYAIGTSSVALFFTALAGTV 187

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            H   G ++          L +     + +   +    L   F++  L++ I M+ +
Sbjct: 188 GHYILGQVHFDKAILLAPGLILGGFSGARLAHEIHPERLKMGFSLILLIIAIRMILK 244


>gi|317052523|ref|YP_004113639.1| hypothetical protein Selin_2367 [Desulfurispirillum indicum S5]
 gi|316947607|gb|ADU67083.1| protein of unknown function DUF81 [Desulfurispirillum indicum S5]
          Length = 264

 Score =  112 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 109/259 (42%), Gaps = 10/259 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L +    ++G L+ L G+GGG++ VPVL+     +  +    + VA+ TSL V+  +
Sbjct: 7   LIPLFLALGAITGFLAALLGIGGGIIYVPVLTFMLPWLTGNGDDFIRVAIATSLLVVLLS 66

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S + + R   +++ +L+  +    I   + S   + +  + L  +FA+    +G  +
Sbjct: 67  SISSSLANLRAHNVHLPLLRRALVSGLIGAFIGSQFGTLLPAALLKISFALLLFYVGYRL 126

Query: 142 L---KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
           +    +          D    +     TG ++   GVGGG F+      +   S+ K   
Sbjct: 127 MASAGKPEYVDGEDILDWRRVFPISAFTGLITSTFGVGGGFFSVPAFNQWCHISLRKCVG 186

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS+ +    +   +   +  G  + GLP      +     ++I   ++   PL   L   
Sbjct: 187 TSSTMIFFNSLMGVFGYLL-GQSITGLP-----LIRYDIAIVIAIGAMAAAPLGIHLLGK 240

Query: 258 IGKKYLTIGFSMIMFTTSF 276
           +        F++++F ++ 
Sbjct: 241 VNLSLFRRFFALLVFASAI 259



 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 50/122 (40%), Gaps = 6/122 (4%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL-IAFPALLVRI 215
            +    G +TGFL+  LG+GGGI    ++ F    +     T  G   + +A    L+ +
Sbjct: 9   PLFLALGAITGFLAALLGIGGGIIYVPVLTFMLPWL-----TGNGDDFIRVAIATSLLVV 63

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                 + L       V++  +   L   ++   + ++   ++    L I F++++F   
Sbjct: 64  LLSSISSSLANLRAHNVHLPLLRRALVSGLIGAFIGSQFGTLLPAALLKISFALLLFYVG 123

Query: 276 FV 277
           + 
Sbjct: 124 YR 125


>gi|212223721|ref|YP_002306957.1| hypothetical membrane protein, conserved [Thermococcus onnurineus
           NA1]
 gi|212008678|gb|ACJ16060.1| hypothetical membrane protein, conserved [Thermococcus onnurineus
           NA1]
          Length = 243

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 22/257 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +     G ++GLFGVGGG ++VP L+           + +HVA+GTSL  I  +S+
Sbjct: 5   LLDFILGLGIGLIAGLFGVGGGFLIVPALTIL--------GLPIHVAIGTSLMCIVLSSL 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   H R GTI  +++           ++ + + S +    L   FA+  + +   M +
Sbjct: 57  SAVAIHVRKGTILYRVVLIKEAFSIPAALIGAYISSLLPGRILKFVFALLLVYLSFRMWR 116

Query: 144 -RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAG 201
            RD    E K        + G+ +G +SG LG+ GGI    L   Y G  +  A  TS+ 
Sbjct: 117 GRDTFEFEEKEIKTSRISVVGVASGLMSGLLGISGGILNVPLFHAYVGIPMRYAVGTSSL 176

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
                A    L              + LG V++   L++ P  ++   +   L + +   
Sbjct: 177 ALFFTALAGSLG------------HYRLGQVDVHTALLLAPGLLVGARIGALLVHRLHPC 224

Query: 262 YLTIGFSMIMFTTSFVF 278
           +L   FS ++   +   
Sbjct: 225 HLKRAFSALLIIVALKM 241



 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 7/118 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I V    SG +SGL G+ GG++ VP+             I M  A+GTS   +  T++  
Sbjct: 133 ISVVGVASGLMSGLLGISGGILNVPLFHAYV-------GIPMRYAVGTSSLALFFTALAG 185

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + H R G +++         L +   + +L++  +    L +AF+   +++ + ML 
Sbjct: 186 SLGHYRLGQVDVHTALLLAPGLLVGARIGALLVHRLHPCHLKRAFSALLIIVALKMLF 243


>gi|150401599|ref|YP_001325365.1| hypothetical protein Maeo_1176 [Methanococcus aeolicus Nankai-3]
 gi|150014302|gb|ABR56753.1| protein of unknown function DUF81 [Methanococcus aeolicus Nankai-3]
          Length = 285

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 101/255 (39%), Gaps = 22/255 (8%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            + VP L      +G   +  + +A+GTSL VI   S+    +  +H  +  K       
Sbjct: 29  FITVPALIYLLDYLGAPPNQSIKIAIGTSLFVIFLNSIAGIYKQSKHNNVIWKNSLLLGL 88

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV------- 158
              I +++   +  +++       F +  +L+ + + +   L  +++  +  V       
Sbjct: 89  FGIIGSIIGLKISMNLNGELHKFIFGLLLILLSLNIGRELYLDYKKEHKETKVANKINKL 148

Query: 159 --------KYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFP 209
                     I G++ G  S   G+GGGI     +  F    I K+  TS G+ ++I+F 
Sbjct: 149 NKNNNHKNMGIMGLLAGIFSSIFGIGGGILVVPFLHHFLKCPITKSIGTSTGMISIISFF 208

Query: 210 ALLVRIYSGWGLNGLPP------WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            L+  I     L  +        + +G V++   LI++    + + L  K S +   + L
Sbjct: 209 GLIGYILMPINLGTIYNSVLNQLYLVGNVSLYIGLIMVISGSIFSHLGAKFSNIADTRTL 268

Query: 264 TIGFSMIMFTTSFVF 278
            I FS+I+       
Sbjct: 269 NIIFSIILLIVGIKM 283


>gi|256810933|ref|YP_003128302.1| protein of unknown function DUF81 [Methanocaldococcus fervens AG86]
 gi|256794133|gb|ACV24802.1| protein of unknown function DUF81 [Methanocaldococcus fervens AG86]
          Length = 261

 Score =  110 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 125/261 (47%), Gaps = 7/261 (2%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + ++ L+I+  F+ G L  L GVGGG ++ P+L+  F   GI + +    A+GTSL V+ 
Sbjct: 4   ILFLPLLIIVGFVIGILGSLLGVGGGFLVAPILTFIFDYFGIPNGV--KFAVGTSLLVVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI-SHVDKSFLNKAFAIFCLLMG 138
             S++S   H +   I+ K       +  I + ++  ++ + +D   L K F  F +L  
Sbjct: 62  INSIISIFRHAKIKNIDWKASIIIGIISLIFSYISGFLVVNFIDSDVLKKIFGTFLILNA 121

Query: 139 ILMLKRDRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           I + K   +    +  DN  K+I  G++TGFLSG  G+GGGI    ++  +   + +  A
Sbjct: 122 IYLGKSHHIDEIHETEDNLPKFIICGVITGFLSGLFGIGGGIVVIPILTLFKYPVKRIIA 181

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            S GV  L +   L+  + +         +++G+V+I   LII    I  + +   L+  
Sbjct: 182 ISIGVVPLTSIGGLISYLTA---NTEGYIYNIGYVSIPIALIISIPIIYSSKIGVMLNQK 238

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           I  KY+ I  S I+       
Sbjct: 239 ISPKYIRIMLSAILGVIGLFM 259


>gi|77460521|ref|YP_350028.1| hypothetical protein Pfl01_4300 [Pseudomonas fluorescens Pf0-1]
 gi|77384524|gb|ABA76037.1| consevred hypothetical membrane protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 271

 Score =  109 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 10/262 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSLGVIAP 80
           L+ +   L+G  + LFG GGG V+VP+L +        D       MH+A+ TS  V+  
Sbjct: 5   LLTLFGCLTGVTAVLFGFGGGFVVVPLLYRMLTASHGADDPISQSAMHIAVATSTCVMIV 64

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            ++++  +HRR G +    L      + +  VV ++    V    +  AF  +  +  + 
Sbjct: 65  NALVATGKHRRAGNLIRDYLWPLGGFIGMGAVVGAIAAVWVSGEVIRYAFIAYLGVTIVD 124

Query: 141 MLKRDRLYCE-----RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            L R     +      +          G+  G ++  LGVGG + T  L+   G S+ +A
Sbjct: 125 CLLRRGFLTQSEGAIPRRLGTLETSGGGVGIGTIATFLGVGGSVMTVPLLRRCGLSMSQA 184

Query: 196 TATSAGVSALIAFPALLVRIY-SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           T+ +  +S  +A    L  +  +G       PW +G+V++ A  ++   S+L   LAT+ 
Sbjct: 185 TSMANPLSVPVALAGTLTYMAMAGLSETKFGPWFIGYVDLLAFAVLTLGSMLGIRLATRW 244

Query: 255 SYMIGKKYLTIGFSMIMFTTSF 276
              I  +     +  ++     
Sbjct: 245 IGRIADRVHAWVYIALLIIVML 266


>gi|229491052|ref|ZP_04384883.1| integral membrane protein [Rhodococcus erythropolis SK121]
 gi|229322033|gb|EEN87823.1| integral membrane protein [Rhodococcus erythropolis SK121]
          Length = 284

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 63/266 (23%), Positives = 117/266 (43%), Gaps = 6/266 (2%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            V+ Y  +++    L+G  + LFG GGG V VPV+  A  L   D    MHVA+ +S  V
Sbjct: 17  QVLHYSLILLAFGALTGVATVLFGFGGGFVTVPVVYAASTLR-PDVIDPMHVAVASSAAV 75

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +   S+ + +  R+ G +  + ++  I  + +   + ++   HVD   +   F ++ L+ 
Sbjct: 76  MVVNSLGATVAFRKSGRLRTEYIRPLIGPVALGAGLGAVAAGHVDDGVVRILFVLYLLVT 135

Query: 138 GILMLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            +  L R         R+  D +     G+  G ++  LGVGG + T  +M   G  +  
Sbjct: 136 ILDSLLRQGFLTPPEPREHLDRHGVRAVGIGIGAVASFLGVGGSVMTVPMMRRGGVPMAD 195

Query: 195 ATATSAGVSALIAFPALLVRIYSG--WGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           A A++  +S  +A  A  V   S      + L    +G V++ AV  +L  S+    L+ 
Sbjct: 196 AAASANPLSLPVAVVATAVYAVSSGHSSASDLSAGRVGAVDLLAVCALLAGSLPAIALSR 255

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++   I  +     +  ++   + V 
Sbjct: 256 RIVGAIPDRVHAAAYIALLGVVTAVM 281


>gi|297526402|ref|YP_003668426.1| protein of unknown function DUF81 [Staphylothermus hellenicus DSM
           12710]
 gi|297255318|gb|ADI31527.1| protein of unknown function DUF81 [Staphylothermus hellenicus DSM
           12710]
          Length = 250

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 59/263 (22%), Positives = 99/263 (37%), Gaps = 27/263 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++ + +   G +S + G+GGG +M+P +           +  +  A+ TSL  I  TS
Sbjct: 4   LIILFLGALGIGFVSAIVGIGGGTLMIPFMVLVL-------NYDVKEAIATSLVSIIVTS 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF----AIFCLLMG 138
             +   + R   +++K             +V + +   +    +   F        L M 
Sbjct: 57  SSASSIYLRRRDVDLKTAFLLEPPTAAGAIVGAFLTISLPTRIVEIVFSLLLLYVSLSML 116

Query: 139 ILMLKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYK 194
           I   KR R+  +          +  +   + G  SG LG+GGG+    LM    G  I  
Sbjct: 117 IDAFKRKRIDAKNHMVSKQRKGLGVLIAFLAGLTSGMLGIGGGVLKVPLMTIVLGLPIRT 176

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A ATS+ +  L A    LV +              G+VN  AV  +    I    L   +
Sbjct: 177 AIATSSFMVGLTASAGSLVYLLK------------GYVNPYAVAALALGIIPGATLGAHM 224

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              I  + L I FS+I+   S  
Sbjct: 225 LKKISPRILKIIFSVILMYASIR 247



 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 53/118 (44%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L ++ +FL+G  SG+ G+GGG++ VP+++           + +  A+ TS  ++  T+  
Sbjct: 139 LGVLIAFLAGLTSGMLGIGGGVLKVPLMTIVL-------GLPIRTAIATSSFMVGLTASA 191

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + +   G +N   +      +     + + M+  +    L   F++  +   I +L
Sbjct: 192 GSLVYLLKGYVNPYAVAALALGIIPGATLGAHMLKKISPRILKIIFSVILMYASIRLL 249



 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
             D  + ++  +  GF+S  +G+GGG      M+      + +A ATS     + +  A 
Sbjct: 1   MLDLIILFLGALGIGFVSAIVGIGGGTLMIPFMVLVLNYDVKEAIATSLVSIIVTSSSAS 60

Query: 212 LVRI 215
            + +
Sbjct: 61  SIYL 64


>gi|270263264|ref|ZP_06191534.1| integral membrane protein [Serratia odorifera 4Rx13]
 gi|270042952|gb|EFA16046.1| integral membrane protein [Serratia odorifera 4Rx13]
          Length = 258

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 3/224 (1%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +I+ A F++G  + LFG GGG V+VP +       G      MH+A+ TS  V+   S 
Sbjct: 1   MIILGAGFITGITTILFGFGGGFVVVPFVYHLVSSSGEQPGQAMHIAVATSTAVMILNSG 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + R G +  + +   IF + I   + +   + +  + +   F I+ L+     L 
Sbjct: 61  YATLTNWRSGNLLRETIIPLIFFISIGAALGAFASTLLADNVVRLLFVIYMLVTIADCLF 120

Query: 144 RDR--LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           R    +   R        ++ G + G ++  LGVGG + T  L+  +G  +    + +  
Sbjct: 121 RQGFLVKPARAALSKMTLWVGGPLIGVIATMLGVGGSVMTVPLLRRHGYEMKHCVSAANP 180

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           +S  +A    L+ I  GW     P + LG+VN+  + +++   I
Sbjct: 181 LSIPVAVIGALMYIGLGWQEMSGPHY-LGYVNLTILGLLVAAGI 223


>gi|167626676|ref|YP_001677176.1| hypothetical protein Fphi_0457 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167596677|gb|ABZ86675.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 252

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 8/254 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L  +  F++  +S L G G GL+ VP                M +A+ T  G+    
Sbjct: 2   LIILGAIVGFVASFISTLLGGGAGLIAVPAFYFIIVHT-YGVDFAMQIAIATCCGMSIFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S ++  +H R G I++  LK ++  L I  +V S++  H++   L   FAI     GI M
Sbjct: 61  SSIATYKHYRKGNIHLGELKYYLVYLSIGALVGSIVAKHINTDLLKIVFAILLFGSGIWM 120

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +  +      K P +    I+G   G LS         F  +  +  G  I KA A ++ 
Sbjct: 121 ILHNDNKV-VKLPRSARYSIFGFC-GILSVLAS--STTFATMFFIKIGTDIKKAIAITSV 176

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              + +    +  +   +G++   P +LG++NI  ++     ++  + LA     +I  K
Sbjct: 177 CVLINS---SIAALVLTYGISINVPSTLGYLNIPLLVSSGIFALAGSLLAVNYLGIISPK 233

Query: 262 YLTIGFSMIMFTTS 275
            L   F ++MF + 
Sbjct: 234 LLKNLFIVLMFVSG 247


>gi|226306945|ref|YP_002766905.1| hypothetical protein RER_34580 [Rhodococcus erythropolis PR4]
 gi|226186062|dbj|BAH34166.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
           PR4]
          Length = 284

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 6/265 (2%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           V+ Y  +++    L+G  + LFG GGG V VPV+  A  L   D    MHVA+ +S  V+
Sbjct: 18  VLHYALILLAFGALTGVTTVLFGFGGGFVTVPVVYAASTLRA-DAIDPMHVAVASSAAVM 76

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              S+ + +  R+ G +  + ++  I  +     + ++   HVD   +   F ++ ++  
Sbjct: 77  VVNSLSATIAFRKSGRLRAEYIRPLIGPVAAGAGLGAVAAGHVDDGAVRILFVLYLVVTI 136

Query: 139 ILMLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +  L R         R+  D +     G+  G ++  LGVGG + T  +M   G  +  A
Sbjct: 137 LDSLLRQGFLTPPEPREHLDRHGVRAVGIGIGAVASFLGVGGSVMTVPMMRRGGVPMADA 196

Query: 196 TATSAGVSALIAFPALLVRIYSGWG--LNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A++  +S  +A  A  V   S      + L    +G +++ AV  +L  S+    L+ +
Sbjct: 197 AASANPLSLPVAVVATAVYAASSGHSTASDLSAGRVGAIDLLAVCALLAGSLPAIALSRR 256

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVF 278
           +   I  +     +  ++   + V 
Sbjct: 257 IVGAIPDRIHAAAYIALLGVVTAVM 281


>gi|126641827|ref|YP_001084811.1| hypothetical protein A1S_1782 [Acinetobacter baumannii ATCC 17978]
          Length = 218

 Score =  106 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 83/196 (42%), Gaps = 4/196 (2%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           M +A+ TS  V+  ++  +   H R G I+ + ++     + +  +V ++  S  + ++L
Sbjct: 1   MQIAVATSAFVMLCSASFAVFRHYRSGHIDWQKIRFLWGGIALGGIVGAVTASLFNGNWL 60

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK---YIWGMVTGFLSGALGVGGGIFTNL 183
              F  +  +  +    R       +   +Y +    I G + G+++  LGVGG + T  
Sbjct: 61  RWIFMGYVFITILDCYYRPGFIVTSRQKQHYGQNSELIKGGIIGWVAALLGVGGSVMTVP 120

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           L+   G+S+ +A A +  ++  ++  A L         +  P   +G +   A L ++  
Sbjct: 121 LLRRRGSSMAEAAAIANILTLPLSLTATLTYCVLSIWQST-PNGFIGLIWFKAALFLVAG 179

Query: 244 SILITPLATKLSYMIG 259
           + +    + K    + 
Sbjct: 180 TWIGLYFSEKFISKLP 195


>gi|18977447|ref|NP_578804.1| hypothetical protein PF1075 [Pyrococcus furiosus DSM 3638]
 gi|18893142|gb|AAL81199.1| hypothetical protein PF1075 [Pyrococcus furiosus DSM 3638]
          Length = 219

 Score =  106 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 98/235 (41%), Gaps = 22/235 (9%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            ++VP+L+           + +H A+GTSL  IA +S  S   H + G +++K++     
Sbjct: 3   FLIVPILTIL--------GLSIHEAIGTSLACIAISSFSSAYTHLKKGKVHIKVVILKEL 54

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY-IWGM 164
                 V+ + + + +++  L  AF++    + + +  + R    ++   +Y +  + G+
Sbjct: 55  FSIPAAVLGAYLTNDINEKILRVAFSMLLFYLAVRLTVKRRAKDSKEAKIHYERVPLVGV 114

Query: 165 VTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            +GFLSG LG+ GGI    L   + G  I  +  TS+      A    +  +        
Sbjct: 115 ASGFLSGLLGISGGILNVPLFTIFVGIPIKYSIGTSSLALFFTALAGAITHLKE------ 168

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 G V +   L + P  I+   +   +S+ I    L + FS ++       
Sbjct: 169 ------GNVVLSIALALAPGLIVGAYVGAIVSHRIHSDKLRVLFSALLLIIGVRM 217



 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 7/115 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +    SG LSGL G+ GG++ VP+ +           I +  ++GTS   +  T++   +
Sbjct: 111 LVGVASGFLSGLLGISGGILNVPLFTIFV-------GIPIKYSIGTSSLALFFTALAGAI 163

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            H + G + + I       L +   V +++   +    L   F+   L++G+ ML
Sbjct: 164 THLKEGNVVLSIALALAPGLIVGAYVGAIVSHRIHSDKLRVLFSALLLIIGVRML 218


>gi|239994353|ref|ZP_04714877.1| hypothetical protein AmacA2_07691 [Alteromonas macleodii ATCC
           27126]
          Length = 123

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 51/122 (41%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A  TSL  I PTSV S   H   G ++  +LK W   + I  +  S  ++ V+ +FL   
Sbjct: 1   ATATSLATIVPTSVSSIRAHHSKGNVDFALLKAWAVFILIGVLAGSYAVTAVNPTFLTLL 60

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
           F I   L  I ML   +    +  P    + I     G  S  +G+GGG  T   + F  
Sbjct: 61  FGIIATLSAINMLIGKKDALFKGLPGRAGQSIMATCIGLFSSMVGIGGGTLTVPTLTFCN 120

Query: 190 AS 191
             
Sbjct: 121 YP 122


>gi|241667251|ref|ZP_04754829.1| hypothetical protein FphipA2_00685 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254875802|ref|ZP_05248512.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254841823|gb|EET20237.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 252

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 106/254 (41%), Gaps = 8/254 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L  +  F++  +S L G G GL+ VP                M +A+ T  G+    
Sbjct: 2   LIILGAIVGFVASFISTLLGGGAGLIAVPAFYFIIVHT-YGADFAMQIAITTCCGMSIFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S ++  +H R G I++  LK ++  L I  +V S++  H++   L   FAI     GI M
Sbjct: 61  SSIATYKHYRKGNIHLGELKYYLVYLSIGALVGSIVAKHINTDLLKIVFAILLFGSGIWM 120

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +  +      K P +    I+    G LS         F  +  +  G  I KA A ++ 
Sbjct: 121 ILHNDNKV-VKLPRSARYSIFSFC-GVLSVLAS--STTFATMFFIKIGTDIKKAIAITSI 176

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              + +    +      +G++   P +LG++NI  ++     ++  + LA     +I  K
Sbjct: 177 CVLINS---SIAAFVLTYGISVNVPSTLGYLNIPLLVSSGIFALAGSLLAVNYLGIISPK 233

Query: 262 YLTIGFSMIMFTTS 275
            L   F ++MF + 
Sbjct: 234 LLKNLFIILMFVSG 247


>gi|330811283|ref|YP_004355745.1| hypothetical protein PSEBR_a4334 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379391|gb|AEA70741.1| Conserved hypothetical protein; putative membrane protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 271

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 107/263 (40%), Gaps = 10/263 (3%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSLGVIA 79
            L+ +   ++G  + LFG GGG V+VP+L +        D       MH+A+ TS  V+ 
Sbjct: 4   LLLALFGCMTGVTAVLFGFGGGFVVVPLLYRMLTASHGADDPIGQSAMHIAVATSTCVMI 63

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++++  +H R G +    +      + +  +V ++         +  AF  +  +  +
Sbjct: 64  VNALIATAKHHRAGNLIRHYVWPLGGFIGLGAIVGAVAAMWASSEVIRYAFIAYLGVTIL 123

Query: 140 LMLKRDRLYCE-----RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             L R            +          G+  G ++  LGVGG + T  L+   G ++ +
Sbjct: 124 DCLFRRGFLTRADAVIPRRLGRAEVSAGGISIGAIATFLGVGGSVMTVPLLRRCGLNMSR 183

Query: 195 ATATSAGVSALIAFPALLVRIY-SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           AT+ +  +S  +A    L  +  +G+    L  W +G+V++ A  ++   S++   LAT 
Sbjct: 184 ATSMANPLSLPVAVAGTLTYMAMAGFTEFDLGQWFVGYVDLQAFAVLTLGSLVGIRLATP 243

Query: 254 LSYMIGKKYLTIGFSMIMFTTSF 276
               I        +  ++     
Sbjct: 244 WIGRIPDGVHAWVYIGLLVIVML 266


>gi|300777957|ref|ZP_07087815.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Chryseobacterium gleum ATCC 35910]
 gi|300503467|gb|EFK34607.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Chryseobacterium gleum ATCC 35910]
          Length = 505

 Score =  103 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 107/271 (39%), Gaps = 37/271 (13%)

Query: 6   YNFS----LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI 61
           Y F+    +  FL+KD  + Y   ++ A F++  ++G  G+G G++     +    L+ +
Sbjct: 237 YQFNLSDDIQYFLNKDGHIFY--WMLFAGFMAEIVAGSMGMGYGVIC----TTILLLLNV 290

Query: 62  DDSIC---MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI 118
             S+    +H A          T+      H + G +N K++     +  + +++ +L +
Sbjct: 291 PPSVVSASIHSAES-------FTTAAGSFSHYKLGNVNKKMVWVLFPLAIVGSIIGALTL 343

Query: 119 SHVDKSF---LNKAFAIFCLLMGILML---KRDRLYCERKFPDNYVKYIWGMVTGFLSGA 172
           SH  + +   +    A + L +GI +L    +D+   + K        I G+  GF+   
Sbjct: 344 SHYGEHYAHIVKPIIACYTLYLGINILQNAFKDKKSGQVKTKRRTNLSILGLAGGFIDSF 403

Query: 173 LGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
            G G G      ++  G        +S     L+   + +  I           +++G  
Sbjct: 404 AGGGWGPLVTGTLIKEGRIPRYVVGSSTVAKFLLTVTSAITFI-----------FTIGIH 452

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYL 263
           +   VL +L   +   P +  L+  +  K +
Sbjct: 453 HWNIVLGLLLGGVFTAPFSAMLTAKLPTKKM 483


>gi|62258425|gb|AAX77790.1| unknown protein [synthetic construct]
          Length = 287

 Score =  103 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 105/257 (40%), Gaps = 8/257 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I    +  F++  +S L G G GL+ VP             +  M +A+ T  G+    
Sbjct: 28  LIIFGAIVGFVASFMSTLLGGGAGLIAVPAFYFIIVHT-YGPNFAMQIALATCCGMSIFL 86

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             ++  +H + G I++  LK ++  L I  ++ S+++ +++   L   FAI     GI M
Sbjct: 87  GSIATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIVKYINTELLKMVFAILLFGSGIWM 146

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +  +      K P +    I+    G LS         F  +  +  G ++ KA A ++ 
Sbjct: 147 ILYNDNKV-IKLPRSARYSIFSFC-GLLSVLAS--STTFATMFFIKIGTNLKKAIAITSV 202

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              + +  A        +G+N   P +   +++  ++     ++  + LA     +I  K
Sbjct: 203 CVVINSSVATF---VLTYGININVPLTFSHLSVPLLISSGLFALAGSLLAVNYLGIISPK 259

Query: 262 YLTIGFSMIMFTTSFVF 278
            L   F  +MF ++ V 
Sbjct: 260 LLKNLFITLMFVSAIVM 276


>gi|328675526|gb|AEB28201.1| hypothetical protein FN3523_0344 [Francisella cf. novicida 3523]
          Length = 252

 Score =  103 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 58/254 (22%), Positives = 105/254 (41%), Gaps = 8/254 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L  +  F++  +S L G G GL+ VP                M +A+ T  G+    
Sbjct: 2   LIILGAIVGFVASFISTLLGGGAGLIAVPAFYFIIVHT-YGADFAMQIAIATCCGMSIFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S ++  +H R G I++  LK ++  L I  +V S++  +++   L   FAI     GI M
Sbjct: 61  SSIATYKHYRKGNIHLGELKYYLVYLSIGALVGSIVAKYINTDLLKIVFAILLFGSGIWM 120

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +  +      K P +    I+    G LS         F  +  +  G  I KA A ++ 
Sbjct: 121 ILHNDNKV-VKLPRSARYSIFSFC-GLLSVLAS--STTFATMFFIKIGTDIKKAIAITSV 176

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              + +    +      +G++   P + G++NI  ++     ++  + LA     +I  K
Sbjct: 177 CVLINS---SIAAFVLTYGISVNVPSTFGYLNIPLLVSSGIFALAGSLLAVNYLGIISPK 233

Query: 262 YLTIGFSMIMFTTS 275
            L   F ++MF + 
Sbjct: 234 LLKSLFIILMFVSG 247


>gi|145629982|ref|ZP_01785764.1| predicted permease [Haemophilus influenzae R3021]
 gi|144984263|gb|EDJ91686.1| predicted permease [Haemophilus influenzae R3021]
          Length = 142

 Score =  103 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/141 (26%), Positives = 67/141 (47%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +  +I L ++   L+G L+GLFG+GGGLV+VP+L     ++ + +S+ M  A+GTS   I
Sbjct: 1   MFTFILLCLLVGALAGFLAGLFGIGGGLVIVPMLVYLLPIVDVPESLLMSTALGTSFATI 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T + S   H + G I  + ++    V+  +  +  L I  +D+    K FA   + + 
Sbjct: 61  VITGIGSAQRHHKLGNIVWQAVRILAPVIMFSVFICGLFIGRLDREISAKIFACLVVYLA 120

Query: 139 ILMLKRDRLYCERKFPDNYVK 159
             M+   +       P     
Sbjct: 121 TKMVLSIKKDQVTTKPLTPFL 141


>gi|187251557|ref|YP_001876039.1| putative permease [Elusimicrobium minutum Pei191]
 gi|186971717|gb|ACC98702.1| putative permease [Elusimicrobium minutum Pei191]
          Length = 275

 Score =  102 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 63/291 (21%), Positives = 113/291 (38%), Gaps = 50/291 (17%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +I L++   F+ G +  +FG+GGG+ +VP+L   F        + +H A+  SL  + 
Sbjct: 1   MSHIWLLLPVGFIIGFMGSMFGIGGGIFIVPILHFGF-------GVPLHQAVACSLLTVV 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S+MS M   + G IN++I K       +  ++ S +I  +    +   F+I    M  
Sbjct: 54  ASSMMSTMAKIQSGVINIRISKSLEIPSILGAIIGSNIIGALPIGVIKVMFSIVAAAMAF 113

Query: 140 LMLKRD-RLYCERKFPDNY-----------------------------VKYIWGMVTGFL 169
            MLK   ++   +K  + Y                                   +  GFL
Sbjct: 114 NMLKNPFKVLTGKKVNEPYYESKECSFADSYRDKATGKTVFYQAKNLKWAVPLSVFAGFL 173

Query: 170 SGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           S  LGVGGG+    LM       I  A+ TS+    L A    LV    G+ +  +    
Sbjct: 174 SSTLGVGGGVINVPLMTNVCKLPIKVASGTSSYKLGLTACAGALVYFRKGYVVEDV---- 229

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                    ++++   +    L   +   I   Y+ + F ++M + +   A
Sbjct: 230 --------TVMVILGILAGAWLGINMLLKIKAFYVEVLFGLLMLSIALKMA 272


>gi|317130121|ref|YP_004096403.1| hypothetical protein Bcell_3430 [Bacillus cellulosilyticus DSM
           2522]
 gi|315475069|gb|ADU31672.1| protein of unknown function DUF81 [Bacillus cellulosilyticus DSM
           2522]
          Length = 274

 Score =  102 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 102/274 (37%), Gaps = 32/274 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++++   ++  L  + G+GGG+++VP L      M I   I   +A+GTSL ++  T +
Sbjct: 4   IILLLLGLVAAILGSIMGLGGGIIVVPALMMLSGYMPILHGITPQIAVGTSLLIMIFTGL 63

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +   ++ +    +        +    +   ++       F  F +L+  +++ 
Sbjct: 64  SSTLAYLKQKKVDYQSAFIFFGGSGPGALFGVWLNKDLNTDIFLIIFGTFIVLVSFVLMV 123

Query: 144 RDRLYCERKFPDNYVKY-------------------IWGMVTGFLSGALGVGGGIFTNLL 184
           R  +   +       +                    + G V G  SG  G+GGG      
Sbjct: 124 RKYILPLKPAKKGVQRTYVNRAGVEITYGYHPIIGILIGFVVGMCSGLFGIGGGSLMVPA 183

Query: 185 M-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           M L +G   + A ATS  +  L A  + +  +            +LG ++   VL +LP 
Sbjct: 184 MILLFGFPPHIAVATSMLMIFLSAILSSVSHM------------ALGNIDWLYVLALLPG 231

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   L   ++  +    +     + +      
Sbjct: 232 AWIGGQLGAAINRKMQSDAIVNLLRVFLIIIGIR 265



 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            + I+  F+ G  SGLFG+GGG +MVP +   F           H+A+ TS+ +I  +++
Sbjct: 156 IIGILIGFVVGMCSGLFGIGGGSLMVPAMILLFGF-------PPHIAVATSMLMIFLSAI 208

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +S + H   G I+   +   +    I   + + +   +    +     +F +++GI ++ 
Sbjct: 209 LSSVSHMALGNIDWLYVLALLPGAWIGGQLGAAINRKMQSDAIVNLLRVFLIIIGIRLIY 268

Query: 144 R 144
           +
Sbjct: 269 Q 269


>gi|301168001|emb|CBW27587.1| putative integral membrane protein [Bacteriovorax marinus SJ]
          Length = 273

 Score =  102 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 60/270 (22%), Positives = 104/270 (38%), Gaps = 20/270 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  +IV     G LS  FGVGGG+++VP L   F  +         V + TSL +I   
Sbjct: 2   LILGLIVTGIFVGLLSTFFGVGGGILIVPTLYTFFSFL------PAQVVIATSLTLIFFN 55

Query: 82  SVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           S  +     + G   N K +      + I  +V   +   +D   +   F+IF  ++ I 
Sbjct: 56  STRNTYNFTKAGVKPNFKFVAPIALAMLIGVIVGGRLALILDAKTIKLIFSIFVFIIAIR 115

Query: 141 MLKRD-------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASI 192
            +              +  F    +  + G+V G +SG  G+GGG +   L +L      
Sbjct: 116 NIFNKNKVADHNNWSPKFTFKTISLGTLTGLVGGLISGLTGLGGGAVLIPLFILILDIPF 175

Query: 193 YKATATSAGVSALIAFPALLVRIYSG-----WGLNGLPPWSLGFVNIGAVLIILPISILI 247
            K +  S     +  F  +L  +        +    L    +G+VN   V+ +   S L 
Sbjct: 176 KKLSVHSNACMVVGTFTGMLTYLIQPTPTFVFNYRILEMGQVGYVNFSIVIALFIGSSLS 235

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + L   L+  +  +   + FS+++   S  
Sbjct: 236 SKLGVNLTQKVSPQVANMLFSILLMVISIK 265



 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKA----FQLMGIDDSICMHV 69
            S       I L  +   + G +SGL G+GGG V++P+        F+ + +  + CM V
Sbjct: 129 WSPKFTFKTISLGTLTGLVGGLISGLTGLGGGAVLIPLFILILDIPFKKLSVHSNACMVV 188

Query: 70  AMGTSLGVIAPTSVMSFMEHRRH------GTINMKILKDWIFVLPITTVVTSLMISHVDK 123
              T +         +F+ + R       G +N  I+        +++ +   +   V  
Sbjct: 189 GTFTGMLTYLIQPTPTFVFNYRILEMGQVGYVNFSIVIALFIGSSLSSKLGVNLTQKVSP 248

Query: 124 SFLNKAFAIFCLLMGILMLKRDRL 147
              N  F+I  +++ I      +L
Sbjct: 249 QVANMLFSILLMVISIKTFVSSQL 272


>gi|208780427|ref|ZP_03247768.1| hypothetical membrane protein [Francisella novicida FTG]
 gi|208743795|gb|EDZ90098.1| hypothetical membrane protein [Francisella novicida FTG]
          Length = 252

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 106/257 (41%), Gaps = 8/257 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I    +  F++  +S L G G GL+ VP             +  M +A+ T  G+    
Sbjct: 2   LIIFGAIVGFVASFMSTLLGGGAGLIAVPAFYFIIVHT-YGPNFAMQIALATCCGMSIFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             ++  +H + G I++  LK ++  L I  ++ S++  +++   L   FAI     GI M
Sbjct: 61  GSIATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKYINTELLKMVFAILLFGSGIWM 120

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +  +      K P +    I+    G LS         F  +  +  G ++ KA A ++ 
Sbjct: 121 ILHNDNKV-IKLPRSARYSIFSFC-GLLSVLAS--STTFATMFFIKIGTNLKKAIAITSV 176

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              + +  A        +G+N   P + G++++  ++     ++  + LA     +I  K
Sbjct: 177 CVVINSSVATF---VLTYGININVPLTFGYLSVPLLISSGLFALAGSLLAVNYLGIISPK 233

Query: 262 YLTIGFSMIMFTTSFVF 278
            L   F  +MF ++ V 
Sbjct: 234 LLKNLFITLMFVSAIVM 250


>gi|228919629|ref|ZP_04082991.1| hypothetical protein bthur0011_6530 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228839983|gb|EEM85262.1| hypothetical protein bthur0011_6530 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 254

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 102/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVLLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   +N  ++      + I + + S   + +D+  +N  + +   +  +
Sbjct: 60  FATFAGAWAYRKSTDMNKTLVVYMGASILIGSFIGSFSANLLDEHAVNVVYTVLATIAAM 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    +        + ++  +   + G +SG +G GG      +ML      +    AT
Sbjct: 120 MMFVPKKNNSGAINYNKWLASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKLPLRMTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKMITGQ------------VVVIPALIIAVASIFAAPLGARVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAVKM 247



 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 46/119 (38%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V +F+ G +SG+ G GG  ++VP++    +L        + + + TS+ +   +SV
Sbjct: 137 WLASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKL-------PLRMTIATSIAITFISSV 189

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                    G + +               + + +   +++  L    +I  +   + M 
Sbjct: 190 GITTGKMITGQVVVIPALIIAVASIFAAPLGARVGKRINQKALQYMLSILIVGTAVKMW 248


>gi|254372344|ref|ZP_04987835.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151570073|gb|EDN35727.1| conserved hypothetical protein [Francisella novicida GA99-3549]
          Length = 252

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 106/257 (41%), Gaps = 8/257 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I    +  F++  +S L G G GL+ VP             +  M +A+ T  G+    
Sbjct: 2   LIIFGAIVGFVASFMSTLLGGGAGLIAVPAFYFIIVHT-YGPNFAMQIALATCCGMSIFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             ++  +H + G I++  LK ++  L I  ++ S++  +++   L   FAI     GI M
Sbjct: 61  GSIATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKYINTELLKMVFAILLFGSGIWM 120

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +  +      K P +    I+    G LS         F  +  +  G ++ KA A ++ 
Sbjct: 121 ILHNDNKV-IKLPRSARYSIFSFC-GLLSVLAS--STTFATMFFIKIGTNLKKAIAITSV 176

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              + +  A        +G+N   P + G++++  ++     ++  + LA     +I  K
Sbjct: 177 CVVINSSVATF---VLTYGININVPLTFGYLSVPLLISSGLFALAGSLLAVNYLGIISPK 233

Query: 262 YLTIGFSMIMFTTSFVF 278
            L   F  +MF ++ V 
Sbjct: 234 LLKSLFITLMFVSAIVM 250


>gi|134302250|ref|YP_001122219.1| hypothetical protein FTW_1334 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134050027|gb|ABO47098.1| hypothetical membrane protein [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 252

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 106/257 (41%), Gaps = 8/257 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I    +  F++  +S L G G GL+ VP             +  M +A+ T  G+    
Sbjct: 2   LIIFGAIVGFVASFMSTLLGGGAGLIAVPAFYFIIVHT-YGPNFAMQIALATCCGMSIFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             ++  +H + G I++  LK ++  L I  ++ S++  +++   L   FAI     GI M
Sbjct: 61  GSIATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKYINTELLKMVFAILLFGSGIWM 120

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +  +      K P +    I+    G LS         F  +  +  G ++ KA A ++ 
Sbjct: 121 ILYNDNKV-IKLPRSARYSIFSFC-GLLSVLAS--STTFATMFFIKIGTNLKKAIAITSV 176

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              + +  A        +G+N   P + G++++  ++     ++  + LA     +I  K
Sbjct: 177 CVVINSSVATF---VLTYGININVPLTFGYLSVPLLISSGLFALAGSLLAVNYLGIISPK 233

Query: 262 YLTIGFSMIMFTTSFVF 278
            L   F  +MF ++ V 
Sbjct: 234 LLKNLFITLMFVSAIVM 250


>gi|229042650|ref|ZP_04190391.1| hypothetical protein bcere0027_7130 [Bacillus cereus AH676]
 gi|228726743|gb|EEL77959.1| hypothetical protein bcere0027_7130 [Bacillus cereus AH676]
          Length = 254

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 102/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   +N  ++      + I + + S   + +D+  +N  + +   +  +
Sbjct: 60  FATFAGAWAYRKSTDMNKMLVVYMGASILIGSFIGSFSANLLDEHAVNVVYTVLATIAAM 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    +        + ++  +   + G +SG +G GG      +ML      +    AT
Sbjct: 120 MMFVPKKNNSGAVKYNKWLASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKLPLRMTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V I   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVIIPALIIAVASIFAAPLGARVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKVLQYMLSILIVGTAIKM 247



 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V +F+ G +SG+ G GG  ++VP++    +L        + + + TS+ +   +SV
Sbjct: 137 WLASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKL-------PLRMTIATSIAITFISSV 189

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G + +               + + +   +++  L    +I  +   I M  
Sbjct: 190 GITTGKVITGQVVIIPALIIAVASIFAAPLGARVGKRINQKVLQYMLSILIVGTAIKMWI 249

Query: 144 R 144
            
Sbjct: 250 D 250


>gi|15923074|ref|NP_370608.1| hypothetical protein SAV0084 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15925788|ref|NP_373321.1| hypothetical protein SA0080 [Staphylococcus aureus subsp. aureus
           N315]
 gi|57652425|ref|YP_184966.1| hypothetical protein SACOL0061 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87160645|ref|YP_492801.1| hypothetical protein SAUSA300_0083 [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88193854|ref|YP_498639.1| hypothetical protein SAOUHSC_00033 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148266513|ref|YP_001245456.1| hypothetical protein SaurJH9_0071 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150392549|ref|YP_001315224.1| hypothetical protein SaurJH1_0073 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|151220238|ref|YP_001331061.1| hypothetical protein NWMN_0026 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156978414|ref|YP_001440673.1| hypothetical protein SAHV_0083 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161508349|ref|YP_001574008.1| hypothetical protein USA300HOU_0090 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253315723|ref|ZP_04838936.1| hypothetical protein SauraC_06186 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|254664012|ref|ZP_05143484.1| hypothetical protein SauraM_00400 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257794436|ref|ZP_05643415.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|258407602|ref|ZP_05680738.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|258419878|ref|ZP_05682840.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|258438607|ref|ZP_05689830.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|258443937|ref|ZP_05692275.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|258445136|ref|ZP_05693373.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|258447741|ref|ZP_05695880.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|258452228|ref|ZP_05700242.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|258455636|ref|ZP_05703591.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|262049455|ref|ZP_06022327.1| hypothetical protein SAD30_1382 [Staphylococcus aureus D30]
 gi|262051900|ref|ZP_06024115.1| hypothetical protein SA930_0854 [Staphylococcus aureus 930918-3]
 gi|269201718|ref|YP_003280987.1| hypothetical protein SAAV_0032 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282894306|ref|ZP_06302536.1| conserved hypothetical protein [Staphylococcus aureus A8117]
 gi|282927920|ref|ZP_06335530.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|282928336|ref|ZP_06335939.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|284023091|ref|ZP_06377489.1| hypothetical protein Saura13_00749 [Staphylococcus aureus subsp.
           aureus 132]
 gi|294850436|ref|ZP_06791167.1| hypothetical protein SKAG_02526 [Staphylococcus aureus A9754]
 gi|295405356|ref|ZP_06815166.1| hypothetical protein SMAG_00507 [Staphylococcus aureus A8819]
 gi|296277103|ref|ZP_06859610.1| hypothetical protein SauraMR_12181 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297244692|ref|ZP_06928572.1| hypothetical protein SLAG_00780 [Staphylococcus aureus A8796]
 gi|5360802|dbj|BAA82172.1| unnamed protein product [Staphylococcus aureus]
 gi|6332751|dbj|BAA86633.1| hypothetical protein [Staphylococcus aureus]
 gi|13700000|dbj|BAB41299.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14245851|dbj|BAB56246.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|57286611|gb|AAW38705.1| conserved domain protein [Staphylococcus aureus subsp. aureus COL]
 gi|87126619|gb|ABD21133.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201412|gb|ABD29222.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147739582|gb|ABQ47880.1| protein of unknown function DUF81 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149945001|gb|ABR50937.1| protein of unknown function DUF81 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|150373038|dbj|BAF66298.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156720549|dbj|BAF76966.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160367158|gb|ABX28129.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257788408|gb|EEV26748.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|257840827|gb|EEV65284.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|257844160|gb|EEV68547.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|257848166|gb|EEV72158.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|257850821|gb|EEV74765.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|257856044|gb|EEV78963.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|257859023|gb|EEV81887.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|257860065|gb|EEV82899.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|257861848|gb|EEV84621.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|259160227|gb|EEW45256.1| hypothetical protein SA930_0854 [Staphylococcus aureus 930918-3]
 gi|259162452|gb|EEW47022.1| hypothetical protein SAD30_1382 [Staphylococcus aureus D30]
 gi|262074008|gb|ACY09981.1| hypothetical protein SAAV_0032 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282589920|gb|EFB95003.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|282592010|gb|EFB97040.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|282763351|gb|EFC03481.1| conserved hypothetical protein [Staphylococcus aureus A8117]
 gi|285815809|gb|ADC36296.1| Protein of unknown function DUF81 [Staphylococcus aureus 04-02981]
 gi|294822706|gb|EFG39144.1| hypothetical protein SKAG_02526 [Staphylococcus aureus A9754]
 gi|294969431|gb|EFG45450.1| hypothetical protein SMAG_00507 [Staphylococcus aureus A8819]
 gi|297178209|gb|EFH37456.1| hypothetical protein SLAG_00780 [Staphylococcus aureus A8796]
 gi|312828603|emb|CBX33445.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315129063|gb|EFT85059.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315196071|gb|EFU26430.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320139484|gb|EFW31355.1| conserved domain protein [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320142114|gb|EFW33934.1| conserved domain protein [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329731849|gb|EGG68209.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           21189]
          Length = 251

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 108/238 (45%), Gaps = 14/238 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++++     G +SGL GVGG +++ P +     L G   +   ++A G +   +  ++
Sbjct: 6   IVIMLLIGVFGGFISGLVGVGGAIIIYPAILLLPPLFG-APAYSAYIASGLTSSQVFFST 64

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   ++ R+    + +++      + I +++ + + +  D +F+N  + I  LL   LM 
Sbjct: 65  LSGSLKARKKTEFSPQLVLYMGGGMIIGSMLGAFLANLFDATFVNTVYIIIALLALTLMF 124

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAG 201
            + +   E+   + Y+  I G+  G +SG +G GG       L++ +   +    A S  
Sbjct: 125 IKVKPSSEKSSFNKYLLVIIGLFIGIISGIVGAGGAFIIIPILLVLFKLPMNTVVANSIV 184

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           ++ + +  A ++++              G++ +   L ++  SI+  P+  KLS  + 
Sbjct: 185 IAFISSIGAFVIKLIQ------------GYIPLYDALFLIIGSIIFAPIGLKLSKKVP 230


>gi|118496975|ref|YP_898025.1| hypothetical protein FTN_0365 [Francisella tularensis subsp.
           novicida U112]
 gi|194324204|ref|ZP_03057978.1| domain protein of unknown function, putative [Francisella
           tularensis subsp. novicida FTE]
 gi|118422881|gb|ABK89271.1| conserved hypothetical membrane protein [Francisella novicida U112]
 gi|194321651|gb|EDX19135.1| domain protein of unknown function, putative [Francisella
           tularensis subsp. novicida FTE]
          Length = 252

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 105/257 (40%), Gaps = 8/257 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I    +  F++  +S L G G GL+ VP             +  M +A+ T  G+    
Sbjct: 2   LIIFGAIVGFVASFMSTLLGGGAGLIAVPAFYFIIVHT-YGPNFAMQIALATCCGMSIFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             ++  +H + G I++  LK ++  L I  ++ S++   ++   L   FAI     GI M
Sbjct: 61  GSIATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKCINTELLKMVFAILLFGSGIWM 120

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +  +      K P +    I+    G LS         F  +  +  G ++ KA A ++ 
Sbjct: 121 ILHNDNKV-IKLPRSARYSIFSFC-GLLSVLAS--STTFATMFFIKIGTNLKKAIAITSV 176

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              + +  A        +G+N   P + G++++  ++     ++  + LA     +I  K
Sbjct: 177 CVVINSSVATF---VLTYGININVPLTFGYLSVPLLISSGLFALAGSLLAVNYLGIISPK 233

Query: 262 YLTIGFSMIMFTTSFVF 278
            L   F  +MF ++ V 
Sbjct: 234 LLKNLFITLMFVSAIVM 250


>gi|254369043|ref|ZP_04985056.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157121964|gb|EDO66134.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 252

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 105/257 (40%), Gaps = 8/257 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I       F++  +S L G G GL+ VP             +  M +A+ T  G+    
Sbjct: 2   LIIFGATVGFVASFMSTLLGGGAGLIAVPAFYFIIVHT-YGPNFAMQIALATCCGMSIFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             ++  +H + G I++  LK ++  L I  ++ S++  +++   L   FAI     GI M
Sbjct: 61  GSIATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKYINTELLKMVFAILLFGSGIWM 120

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +  +      K P +    I+    G LS         F  +  +  G ++ KA A ++ 
Sbjct: 121 ILYNDNKV-IKLPRSARYSIFSFC-GLLSVLAS--STTFATMFFIKIGTNLKKAIAITSV 176

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              + +  A        +G+N   P + G++++  ++     ++  + LA     +I  K
Sbjct: 177 CVVINSSVATF---VLTYGININVPLTFGYLSVPLLISSGLFALAGSLLAVNYLGIISPK 233

Query: 262 YLTIGFSMIMFTTSFVF 278
            L   F  +MF ++ V 
Sbjct: 234 ILKNLFITLMFVSAIVM 250


>gi|282166064|gb|ADA80084.1| Protein of unknown function DUF81 [Staphylococcus aureus]
          Length = 251

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 108/241 (44%), Gaps = 14/241 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++++     G +SGL G+GG +++ P +     L G   +   ++A G +   + 
Sbjct: 3   ISTVIMMLLIGVFGGFISGLVGIGGAIIIYPAILLLPPLFG-APAYSAYIASGLTSSQVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +++   ++ R+    + +++      + I +++ +L+ +  D +F+N  + I  LL  I
Sbjct: 62  FSTLSGSLKARKKPEFSPQLVLYMGGGMIIGSMLGALLANLFDATFVNMVYIIIALLALI 121

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
           LM    +   ++   +  +  I G+  G +SG +G GG       L++ +   +    A 
Sbjct: 122 LMFINVKPSSDQSSFNKPLLVIVGLFVGIISGIVGAGGAFIIIPILLVLFKLPMNTVVAN 181

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +  A ++++              G++ +   L ++  SI+  PL  KL   +
Sbjct: 182 SIVIAFISSIGAFIIKLIQ------------GYIPLEDALFLIIGSIIFAPLGLKLGKKV 229

Query: 259 G 259
            
Sbjct: 230 P 230


>gi|328676450|gb|AEB27320.1| hypothetical protein FNFX1_0372 [Francisella cf. novicida Fx1]
          Length = 252

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 106/257 (41%), Gaps = 8/257 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I    +  F++  +S L G G GL+ VP             +  M +A+ T  G+    
Sbjct: 2   LIIFGAIVGFVASFMSTLLGGGAGLIAVPAFYFIIVHT-YGSNFAMQIALATCCGMSIFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             ++  +H + G I++  LK ++  L I  ++ S++  +++   L   FAI     GI M
Sbjct: 61  GSIATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKYINTELLKMVFAILLFGSGIWM 120

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +  +      K P +    I+    G LS         F  +  +  G ++ KA A ++ 
Sbjct: 121 ILHNDNKV-IKLPRSARYSIFSFC-GLLSVLAS--STTFATMFFIKIGTNLKKAIAITSV 176

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              + +  A        +G+N   P + G++++  ++     ++  + LA     +I  K
Sbjct: 177 CVVINSSVATF---VLTYGININVPLTFGYLSVPLLISSGLFALAGSLLAVNYLGIISPK 233

Query: 262 YLTIGFSMIMFTTSFVF 278
            L   F  +MF ++ V 
Sbjct: 234 LLKCLFITLMFVSAIVM 250


>gi|21281783|ref|NP_644869.1| hypothetical protein MW0054 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49484959|ref|YP_042180.1| hypothetical protein SAS0054 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297209419|ref|ZP_06925817.1| hypothetical membrane Spanning protein [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300911418|ref|ZP_07128867.1| hypothetical membrane Spanning protein [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|21203218|dbj|BAB93919.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49243402|emb|CAG41822.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|296885880|gb|EFH24815.1| hypothetical membrane Spanning protein [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300887597|gb|EFK82793.1| hypothetical membrane Spanning protein [Staphylococcus aureus
           subsp. aureus TCH70]
          Length = 251

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 108/238 (45%), Gaps = 14/238 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++++     G +SGL GVGG +++ P +     L G   +   ++A G +   +  ++
Sbjct: 6   IVIMLLIGVFGGFISGLVGVGGAIIIYPAILLLPPLFG-APAYSAYIASGLTSSQVFFST 64

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   ++ R+    + +++      + I +++ + + +  D +F+N  + I  LL   LM 
Sbjct: 65  LSGSLKARKKTEFSPQLVLYMGGGMIIGSMLGAFLANLFDATFVNTVYIIIALLALTLMF 124

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAG 201
            + +   E+   + Y+  I G+  G +SG +G GG       L++ +   +    A S  
Sbjct: 125 IKVKPSSEKSSFNKYLLVIIGLFIGIISGIVGAGGAFIIIPILLVLFKLPMNTVVANSIV 184

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           ++ + +  A ++++              G++ +   L ++  SI+  P+  KLS  + 
Sbjct: 185 IAFISSIGAFVIKLIQ------------GYIPLYDALFLIIGSIIFAPIGLKLSKKVP 230


>gi|20093583|ref|NP_613430.1| permease [Methanopyrus kandleri AV19]
 gi|19886439|gb|AAM01360.1| Predicted permease [Methanopyrus kandleri AV19]
          Length = 252

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 58/258 (22%), Positives = 101/258 (39%), Gaps = 22/258 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L +    L G +SG+FGVGGG ++VP+L+           + MH+A+GT+L  I+   
Sbjct: 7   MMLYLGIGGLVGLVSGMFGVGGGFLLVPLLN--------STGMPMHLALGTTLLAISLGG 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                 H + G +++     +     +   V S +     +  L  A  + C  M + M 
Sbjct: 59  FTGAYRHLQEGNVHVDAAPIFGLSAIVGAQVGSYLACLTPEHVLKVALGVACSAMALRMA 118

Query: 143 KRDRLYCERKFPDN-YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA 200
                    +  DN  V  + G   G  SG  G GGG+    +M          A  TS+
Sbjct: 119 FDGETEEGNEIRDNIAVASLTGFGVGAFSGFTGSGGGVLFVPVMASVLNFPTMLAIGTSS 178

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  + A                   W  G+VN  A L ++   ++ + +  +LS  IG 
Sbjct: 179 VIVPVSALAGAAQY------------WMEGYVNFWAALAVVTGMLISSYVGAELSNKIGG 226

Query: 261 KYLTIGFSMIMFTTSFVF 278
           + +   FS+++       
Sbjct: 227 ERVKRAFSVVLALVGAKM 244



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 12/126 (9%)

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
           P   +    G + G +SG  GVGGG     L+   G  ++ A  T+      I+      
Sbjct: 5   PSMMLYLGIGGLVGLVSGMFGVGGGFLLVPLLNSTGMPMHLALGTTL---LAISLGGFTG 61

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
                           G V++ A  I    +I+   + + L+ +  +  L +   +    
Sbjct: 62  ---------AYRHLQEGNVHVDAAPIFGLSAIVGAQVGSYLACLTPEHVLKVALGVACSA 112

Query: 274 TSFVFA 279
            +   A
Sbjct: 113 MALRMA 118



 Score = 42.4 bits (99), Expect = 0.075,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
             + + D I +  +  F  G  SG  G GGG++ VPV++               +A+GTS
Sbjct: 125 EGNEIRDNIAVASLTGFGVGAFSGFTGSGGGVLFVPVMASVLNF-------PTMLAIGTS 177

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
             ++  +++    ++   G +N       +  + I++ V + + + +    + +AF++  
Sbjct: 178 SVIVPVSALAGAAQYWMEGYVNFWAALAVVTGMLISSYVGAELSNKIGGERVKRAFSVVL 237

Query: 135 LLMGILMLKR 144
            L+G  M+  
Sbjct: 238 ALVGAKMVLS 247


>gi|228957199|ref|ZP_04118966.1| hypothetical protein bthur0005_7250 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228802526|gb|EEM49376.1| hypothetical protein bthur0005_7250 [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 254

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 102/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + LI +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVLLIFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   +N  ++      + I + + S   + +D+  +N  + +   +  +
Sbjct: 60  FATFAGAWAYRKSTDMNKMLVVYMGASILIGSFLGSFSANLLDEHAVNVVYTVLATIAAM 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    +        + ++  +   + G +SG +G GG      +ML      +    AT
Sbjct: 120 MMFVPKKNNSGAVKYNKWLASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKLPLRMTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V I   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVIIPALIIAVASIFAAPLGARVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKVLQYMLSILIVGTAIKM 247



 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V +F+ G +SG+ G GG  ++VP++    +L        + + + TS+ +   +SV
Sbjct: 137 WLASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKL-------PLRMTIATSIAITFISSV 189

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G + +               + + +   +++  L    +I  +   I M  
Sbjct: 190 GITTGKVITGQVVIIPALIIAVASIFAAPLGARVGKRINQKVLQYMLSILIVGTAIKMWI 249

Query: 144 R 144
            
Sbjct: 250 D 250


>gi|67923462|ref|ZP_00516939.1| Protein of unknown function DUF81 [Crocosphaera watsonii WH 8501]
 gi|67854697|gb|EAM49979.1| Protein of unknown function DUF81 [Crocosphaera watsonii WH 8501]
          Length = 258

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 57/266 (21%), Positives = 106/266 (39%), Gaps = 27/266 (10%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++D + ++I++   SG L+G+ G+GGG V+VP+L                 A+ TS   I
Sbjct: 1   MLDEVVILILSGLGSGLLAGVLGIGGGTVLVPLLLAF--------DYTSLQAIATSSLAI 52

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS    +++ R G ++ + +        ITT    L+ + + +  L  AFA   +   
Sbjct: 53  FITSSAGSIQNWRMGYLDFQRVILLGIPALITTQFGVLVANRIPEFILLTAFACMLIFNI 112

Query: 139 I------LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL-MLFYGAS 191
                   ++       E +  +     + G++ GFL+G  G+GGG+    L ML     
Sbjct: 113 FLSNLRRQLVTTPHQVSEVRLSEKVACLLTGVIVGFLAGLFGIGGGVIMVPLQMLLLKEE 172

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           I  A  TS GV  + +  +      +   +  L   +LGF             ++    +
Sbjct: 173 IKVAIQTSLGVIVITSISSCFGHALNN-NVVWLVGITLGF-----------GGLIGVQFS 220

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
           T+    +  K +   F  ++   S  
Sbjct: 221 TRFLPRLPDKVVRFCFYAMLAMLSVY 246



 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              ++   + G L+GLFG+GGG++MVP+     +         + VA+ TSLGVI  TS+
Sbjct: 137 VACLLTGVIVGFLAGLFGIGGGVIMVPLQMLLLKE-------EIKVAIQTSLGVIVITSI 189

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S   H  +  +   +     F   I    ++  +  +    +   F     ++ +    
Sbjct: 190 SSCFGHALNNNVVWLVGITLGFGGLIGVQFSTRFLPRLPDKVVRFCFYAMLAMLSVYTFW 249

Query: 144 R 144
           +
Sbjct: 250 K 250


>gi|323140499|ref|ZP_08075427.1| hypothetical protein HMPREF9443_00183 [Phascolarctobacterium sp.
           YIT 12067]
 gi|322415067|gb|EFY05858.1| hypothetical protein HMPREF9443_00183 [Phascolarctobacterium sp.
           YIT 12067]
          Length = 278

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 85/241 (35%), Gaps = 27/241 (11%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +V+VP+L  A+            +A+GTS+ ++   +V     + R   + +     +  
Sbjct: 52  MVIVPLLVFAW-------DYEPQLAIGTSVLMVLMNAVSGTWGYIRQKKVCVDAALKFAV 104

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-------V 158
                  + S    ++        F  F +L  I M ++       K            +
Sbjct: 105 ATVPGAFLGSYAAEYLQGRLFYLVFGAFFVLAAINMYRKASKNAAGKTAGEVPEVYNWKL 164

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYS 217
             +  +  GFL+  LG+GGGI     M++     ++ A ATS  + A+ +   L+     
Sbjct: 165 GVLCSVGVGFLASILGIGGGIVHVPFMVYVLNFPVHVAIATSTCILAVSSLAGLVSHAM- 223

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                      LG +   + L I   + +       L+  +    L    S+++  T   
Sbjct: 224 -----------LGHIVWTSGLAIGAGAFVGAQGGVALAQRLQSGILMKLASVLVLITGIK 272

Query: 278 F 278
           F
Sbjct: 273 F 273



 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L ++ S   G L+ + G+GGG+V VP +              +HVA+ TS  ++A +S+ 
Sbjct: 164 LGVLCSVGVGFLASILGIGGGIVHVPFMVYVLNF-------PVHVAIATSTCILAVSSLA 216

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + H   G I             +       +   +    L K  ++  L+ GI  L  
Sbjct: 217 GLVSHAMLGHIVWTSGLAIGAGAFVGAQGGVALAQRLQSGILMKLASVLVLITGIKFLLD 276


>gi|254373818|ref|ZP_04989301.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|151571539|gb|EDN37193.1| conserved hypothetical protein [Francisella novicida GA99-3548]
          Length = 252

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 106/257 (41%), Gaps = 8/257 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I    +  F++  +S L G G GL+ VP             +  M +A+ T  G+    
Sbjct: 2   LIIFGAIVGFVASFMSTLLGGGAGLIAVPAFYFIIVHT-YGSNFAMQIALATCCGMSIFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             ++  +H + G I++  LK ++  L I  ++ S++  +++   L   FAI     GI M
Sbjct: 61  GSIATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKYINTELLKMVFAILLFGSGIWM 120

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +  +      K P +    I+    G LS         F  +  +  G ++ KA A ++ 
Sbjct: 121 ILHNDNKV-IKLPRSARYSIFSFC-GLLSVLAS--STTFATMFFIKIGTNLKKAIAITSV 176

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              + +    +      +G+N   P + G++++  ++     ++  + LA     +I  K
Sbjct: 177 CVVINS---SIATFVLTYGININVPLTFGYLSMPLLISSGLFALAGSLLAVNYLGIISPK 233

Query: 262 YLTIGFSMIMFTTSFVF 278
            L   F  +MF ++ V 
Sbjct: 234 LLKCLFITLMFVSAIVM 250


>gi|82749805|ref|YP_415546.1| hypothetical protein SAB0028c [Staphylococcus aureus RF122]
 gi|82655336|emb|CAI79716.1| conserved hypothetical protein [Staphylococcus aureus RF122]
          Length = 251

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 112/251 (44%), Gaps = 14/251 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++++     G +SGL GVGG +++ P +     L G   +   ++A G +   +  ++
Sbjct: 6   IVIMLLIGVFGGFISGLVGVGGAIIIYPAILLLPPLFG-APAYSAYIASGLTSSQVFFST 64

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   ++ R+    + +++      + I +++ + + +  D +F+N  + I  LL   LM 
Sbjct: 65  LSGSLKARKKTEFSPQLVIYMGGGMIIGSMLGAFLANLFDATFVNTVYIIIALLALTLMF 124

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAG 201
            + +   E+   + Y+  I G+  G +SG +G GG       L++ +   +    A S  
Sbjct: 125 IKVKPSSEKSSFNKYLLVIIGLFIGIISGIVGAGGAFIIIPILLVLFKLPMNTVVANSIV 184

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           ++ + +  A ++++              G++ +   L ++  SI+  P+  KLS  +   
Sbjct: 185 IAFISSIGAFVIKLIQ------------GYIPLYDALFLIIGSIIFAPIGLKLSKKVPNI 232

Query: 262 YLTIGFSMIMF 272
                 S+++ 
Sbjct: 233 IQKWIISILIV 243


>gi|296501523|ref|YP_003663223.1| hypothetical protein BMB171_C0686 [Bacillus thuringiensis BMB171]
 gi|296322575|gb|ADH05503.1| hypothetical protein BMB171_C0686 [Bacillus thuringiensis BMB171]
          Length = 254

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 102/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSGVLLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   +N  ++      + I + + S   + +D+  +N  + +   +  +
Sbjct: 60  FATFAGAWAYRKSTDMNKMLVVYMGASILIGSFIGSFSANLLDEHAVNVVYTVLATIAAM 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    +        + ++  +   + G +SG +G GG      +ML      +    AT
Sbjct: 120 MMFVPKKNNSGAVKYNKWLASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKLPLRMTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V I   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVIIPALIIAVASIFAAPLGARVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKVLQYMLSILIVGTAIKM 247



 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V +F+ G +SG+ G GG  ++VP++    +L        + + + TS+ +   +SV
Sbjct: 137 WLASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKL-------PLRMTIATSIAITFISSV 189

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G + +               + + +   +++  L    +I  +   I M  
Sbjct: 190 GITTGKVITGQVVIIPALIIAVASIFAAPLGARVGKRINQKVLQYMLSILIVGTAIKMWI 249

Query: 144 R 144
            
Sbjct: 250 D 250


>gi|218233696|ref|YP_002365571.1| hypothetical protein BCB4264_A0836 [Bacillus cereus B4264]
 gi|218161653|gb|ACK61645.1| putative membrane protein [Bacillus cereus B4264]
          Length = 254

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 102/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSGVLLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   +N  ++      + I + + S   + +D+  +N  + +   +  +
Sbjct: 60  FATFAGAWAYRKSTDMNKMLVVYMGASILIGSFIGSFSANLLDEHAVNVVYTVLATIAAM 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    +        + ++  +   + G +SG +G GG      +ML      +    AT
Sbjct: 120 MMFVPKKNNSGAVKYNKWLASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKLPLRMTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V I   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVIIPALIIAVASIFAAPLGARVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKVLQYMLSILIVGTAVKM 247



 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V +F+ G +SG+ G GG  ++VP++    +L        + + + TS+ +   +SV
Sbjct: 137 WLASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKL-------PLRMTIATSIAITFISSV 189

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G + +               + + +   +++  L    +I  +   + M  
Sbjct: 190 GITTGKVITGQVVIIPALIIAVASIFAAPLGARVGKRINQKVLQYMLSILIVGTAVKMWI 249

Query: 144 R 144
            
Sbjct: 250 D 250


>gi|288554026|ref|YP_003425961.1| hypothetical protein BpOF4_05025 [Bacillus pseudofirmus OF4]
 gi|288545186|gb|ADC49069.1| hypothetical protein BpOF4_05025 [Bacillus pseudofirmus OF4]
          Length = 274

 Score = 99.8 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 105/274 (38%), Gaps = 32/274 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+++   ++GT   L G+GGG+++VP L      +GI   +   VA+GTSL ++  T +
Sbjct: 4   ILLVIVGLVAGTFGSLLGLGGGIIVVPALLLLSSTVGILAGVTPQVAVGTSLLIMIFTGL 63

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +   ++ K    +        ++   +  +++       F +F +++ I+++ 
Sbjct: 64  SSTLAYIKQKKVDYKSGLLFFLGSGPGALIGVWLNRYLEVEPFLIYFGLFMIVVAIVLII 123

Query: 144 RDRLYCERKFP-------------------DNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
           R  L                             V      V G LSG  G+GGG      
Sbjct: 124 RPYLKPIPLSEKGVKRTYVNDLGESFEYGYRPAVAISIAFVVGMLSGLFGIGGGSLMVPA 183

Query: 185 ML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           M+  +    + A ATS  +  L A  + +  I             LG VN    L ++P 
Sbjct: 184 MIMLFHFPPHMAVATSMFMILLSAITSSVSHIV------------LGNVNWLYALALIPG 231

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + L       ++  +    L I F + +   +  
Sbjct: 232 AYLGGIAGAAINKRLSSNALLIAFRIFLIIAAIR 265



 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I  +F+ G LSGLFG+GGG +MVP +   F           H+A+ TS+ +I  +++ S 
Sbjct: 159 ISIAFVVGMLSGLFGIGGGSLMVPAMIMLFHF-------PPHMAVATSMFMILLSAITSS 211

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + H   G +N       I    +  +  + +   +  + L  AF IF ++  I ++ +
Sbjct: 212 VSHIVLGNVNWLYALALIPGAYLGGIAGAAINKRLSSNALLIAFRIFLIIAAIRLIYQ 269


>gi|320529237|ref|ZP_08030329.1| hypothetical protein HMPREF9555_00386 [Selenomonas artemidis F0399]
 gi|320138867|gb|EFW30757.1| hypothetical protein HMPREF9555_00386 [Selenomonas artemidis F0399]
          Length = 272

 Score = 99.8 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 55/265 (20%), Positives = 94/265 (35%), Gaps = 22/265 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM-GTSLGVIAPT 81
           I L ++     GT   L G+GGGL+ VP+        GI         + GTSL ++   
Sbjct: 12  ILLFLILGVFVGTFGTLVGIGGGLICVPIFIFFLSDGGIYPYFHTAAQITGTSLVIVLAN 71

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++     + R   +       +         + S ++       L  +F  F L+M  +M
Sbjct: 72  ALSGTAAYIRQKRVYFPAAVPFALATLPGAFLGSYIVDDFTGPMLYVSFGAFLLIMACMM 131

Query: 142 LKRDRLYCE---RKFPDNY-----VKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASI 192
                        + P N+     +     +  GFLS   G+GGG+    LM++     +
Sbjct: 132 YWNATHKTHVDVHELPANFTFNRSLGIGSSLGVGFLSSIFGIGGGVIHVPLMVYLLNFPV 191

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           + ATATS  V A  A   ++  ++            LG V     + I   + +   +  
Sbjct: 192 HAATATSHFVLAASAAFGVISHMW------------LGHVIWTPAICISIGAAVGAQIGA 239

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
            LS     K +    +  MF     
Sbjct: 240 ALSRKAKSKMILTLLAAAMFALGLR 264



 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I +S   G LS +FG+GGG++ VP++              +H A  TS  V+A ++  
Sbjct: 156 LGIGSSLGVGFLSSIFGIGGGVIHVPLMVYLLNF-------PVHAATATSHFVLAASAAF 208

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + H   G +             +   + + +        +    A     +G+ ++
Sbjct: 209 GVISHMWLGHVIWTPAICISIGAAVGAQIGAALSRKAKSKMILTLLAAAMFALGLRLI 266



 Score = 35.8 bits (82), Expect = 7.2,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 37/128 (28%), Gaps = 21/128 (16%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS---------IYKATATSAGVSALIAFPA 210
            I G+  G     +G+GGG+    + +F+ +            + T TS  +    A   
Sbjct: 16  LILGVFVGTFGTLVGIGGGLICVPIFIFFLSDGGIYPYFHTAAQITGTSLVIVLANALSG 75

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
               I                V   A +     ++    L + +        L + F   
Sbjct: 76  TAAYIRQKR------------VYFPAAVPFALATLPGAFLGSYIVDDFTGPMLYVSFGAF 123

Query: 271 MFTTSFVF 278
           +   + + 
Sbjct: 124 LLIMACMM 131


>gi|30018958|ref|NP_830589.1| hypothetical protein BC0799 [Bacillus cereus ATCC 14579]
 gi|29894500|gb|AAP07790.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579]
          Length = 254

 Score = 99.4 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 102/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSGVLLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   +N  ++      + I + + S   + +D+  +N  + +   +  +
Sbjct: 60  FATFAGAWAYRKSTDMNKMLVVYMGASILIGSFIGSFSANLLDEHAVNVVYTVLATIAAM 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    +        + ++  +   + G +SG +G GG      +ML      +    AT
Sbjct: 120 MMFVPKKNNSGAVKYNKWLASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKLPLRMTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V I   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVIIPALIIAVASIFAAPLGARVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKVLQYMLSILIVGTAVKM 247



 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V +F+ G +SG+ G GG  ++VP++    +L        + + + TS+ +   +SV
Sbjct: 137 WLASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKL-------PLRMTIATSIAITFISSV 189

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G + +               + + +   +++  L    +I  +   + M  
Sbjct: 190 GITTGKVITGQVVIIPALIIAVASIFAAPLGARVGKRINQKVLQYMLSILIVGTAVKMWI 249

Query: 144 R 144
            
Sbjct: 250 D 250


>gi|253730433|ref|ZP_04864598.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253725817|gb|EES94546.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 251

 Score = 99.4 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 107/238 (44%), Gaps = 14/238 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++++     G +SGL GVGG +++ P +     L G   +   ++A G +   +  ++
Sbjct: 6   IVIMLLIGVFGGFISGLVGVGGAIIIYPAILLLPPLFG-APAYSAYIASGLTSSQVFFST 64

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   ++ R+    + +++      + I +++ + + +    +F+N  + I  LL   LM 
Sbjct: 65  LSGSLKARKKTEFSPQLVLYMGGGMIIGSMLGAFLANLFHATFVNTVYIIIALLALTLMF 124

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAG 201
            + +   E+   + Y+  I G+  G +SG +G GG       L++ +   +    A S  
Sbjct: 125 IKVKPSSEKSSFNKYLLVIIGLFIGIISGIVGAGGAFIIIPILLVLFKLPMNTVVANSIV 184

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           ++ + +  A ++++              G++ +   L ++  SI+  P+  KLS  + 
Sbjct: 185 IAFISSIGAFVIKLIQ------------GYIPLYDALFLIIGSIIFAPIGLKLSKKVP 230


>gi|229016112|ref|ZP_04173065.1| hypothetical protein bcere0030_6910 [Bacillus cereus AH1273]
 gi|229022350|ref|ZP_04178889.1| hypothetical protein bcere0029_7050 [Bacillus cereus AH1272]
 gi|228738950|gb|EEL89407.1| hypothetical protein bcere0029_7050 [Bacillus cereus AH1272]
 gi|228745162|gb|EEL95211.1| hypothetical protein bcere0030_6910 [Bacillus cereus AH1273]
          Length = 252

 Score = 99.4 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 102/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLTVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAIQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + V S   + +++  +N  + +   +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKTLVVYMGASILIGSFVGSFSANLLNEHAVNIVYTLLATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    +        + ++  +   + G +SG +G GG      +ML      I    AT
Sbjct: 120 MMFVPKKNNSGAVNYNKWLASMLAFIVGSVSGIIGAGGAFLLVPIMLVVLKLPIRTTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V + A++ +   S+   PL  ++   +
Sbjct: 180 SIAITFISSVGITTGKVITGQ-----------IVVMPALI-VAIASLFAAPLGVRVGKRV 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKVLQYVLSILIVGTAIKM 247



 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  + +F+ G++SG+ G GG  ++VP++    +L        +   + TS+ +   +SV
Sbjct: 137 WLASMLAFIVGSVSGIIGAGGAFLLVPIMLVVLKL-------PIRTTIATSIAITFISSV 189

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G I +               +   +   V++  L    +I  +   I M  
Sbjct: 190 GITTGKVITGQIVVMPALIVAIASLFAAPLGVRVGKRVNQKVLQYVLSILIVGTAIKMWI 249

Query: 144 R 144
            
Sbjct: 250 D 250


>gi|255659129|ref|ZP_05404538.1| putative membrane protein [Mitsuokella multacida DSM 20544]
 gi|260848575|gb|EEX68582.1| putative membrane protein [Mitsuokella multacida DSM 20544]
          Length = 263

 Score = 99.4 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 57/265 (21%), Positives = 99/265 (37%), Gaps = 22/265 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM-GTSLGVIAPT 81
           I L ++     GT   L G+GGGL+ VP+        G+         + GTSL V+   
Sbjct: 3   IILFLLLGIGVGTFGTLVGIGGGLICVPIFILFLSDGGVYPYFHTAAQIAGTSLVVVMAN 62

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++   + + R   +       +        V+ S +++      L+  F IF LLM I+M
Sbjct: 63  AMSGTLAYIRQKRVLFSAAIPFAIATLPGAVLGSWIVNKFSTPMLDLYFGIFLLLMSIIM 122

Query: 142 LKRDRLYCERKFP--------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASI 192
                                +  +  +  +  GFLS   G+GGG+    LM++  G  +
Sbjct: 123 YWNSTHKPVSNIMELPKDFQYNRTLGIVASLGVGFLSSIFGIGGGVIHVPLMIYLLGFPV 182

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           + ATATS  V A  +   ++              + L  +     + I   + +   +  
Sbjct: 183 HVATATSHFVLACSSAFGVIS------------HFMLDHIIWVPAICISIGAAIGAQIGA 230

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           KLS     K + +  S+ MF     
Sbjct: 231 KLSKKTKSKVILMLLSLAMFALGIR 255



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L IVAS   G LS +FG+GGG++ VP++              +HVA  TS  V+A +S 
Sbjct: 146 TLGIVASLGVGFLSSIFGIGGGVIHVPLMIYLLGF-------PVHVATATSHFVLACSSA 198

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + H     I             I   + + +        +    ++    +GI ++ 
Sbjct: 199 FGVISHFMLDHIIWVPAICISIGAAIGAQIGAKLSKKTKSKVILMLLSLAMFALGIRLIL 258


>gi|138895624|ref|YP_001126077.1| hypothetical protein GTNG_1977 [Geobacillus thermodenitrificans
           NG80-2]
 gi|196249608|ref|ZP_03148305.1| protein of unknown function DUF81 [Geobacillus sp. G11MC16]
 gi|134267137|gb|ABO67332.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|196210902|gb|EDY05664.1| protein of unknown function DUF81 [Geobacillus sp. G11MC16]
          Length = 260

 Score = 99.4 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 106/264 (40%), Gaps = 18/264 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  +  I +I +  F+   +SG+ G+GG ++  P+L     L G+  +   H   G S  
Sbjct: 2   DLSLQLIIVIFLIGFIGSFISGMVGIGGSIIKYPMLLYLPPLFGL-AAFSAHEVSGISAV 60

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   ++     +R+ G +N  ++      + I + V       + +  +N  + +   L
Sbjct: 61  QVFFATIGGVWAYRKGGYLNKSLILYMGASILIGSFVGGYGSKLMSEGAMNVVYGVLAAL 120

Query: 137 MGILMLKRDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
             I+M    +    +  ++   + ++  +   + G  SG +G  G      +ML      
Sbjct: 121 AAIMMFVPKKGIDDIPLDQVTFNKWLAAVLAFLIGVGSGIVGAAGAFLLVPIMLVVLKIP 180

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
                ATS  V+ + +  +   +I +G               I A++ ++  S+L +PL 
Sbjct: 181 TRMTIATSLAVTFISSIGSTFGKITTGQVD-----------YIPALV-MVAASLLASPLG 228

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTS 275
            K    +  K L +  ++++  T+
Sbjct: 229 AKTGQKMNTKVLQVILAVLVLATA 252



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 7/129 (5%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  D V     L  V +FL G  SG+ G  G  ++VP++    +       I   + + T
Sbjct: 135 IPLDQVTFNKWLAAVLAFLIGVGSGIVGAAGAFLLVPIMLVVLK-------IPTRMTIAT 187

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           SL V   +S+ S       G ++       +    + + + +     ++   L    A+ 
Sbjct: 188 SLAVTFISSIGSTFGKITTGQVDYIPALVMVAASLLASPLGAKTGQKMNTKVLQVILAVL 247

Query: 134 CLLMGILML 142
            L   + + 
Sbjct: 248 VLATAVNIW 256


>gi|254172062|ref|ZP_04878738.1| conserved domain protein, putative [Thermococcus sp. AM4]
 gi|214033958|gb|EEB74784.1| conserved domain protein, putative [Thermococcus sp. AM4]
          Length = 243

 Score = 99.0 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 91/233 (39%), Gaps = 22/233 (9%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP L              +H+A+GTSL  I  +S+ + + H R G +  +++       
Sbjct: 29  IVPALVLL--------GEPIHLAIGTSLTCIVLSSLSASLTHIRRGAVLYRVVLLKEVFS 80

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY-IWGMVT 166
               V+ + + S +    L   FA+  L +   M +      E     +Y +  + G+++
Sbjct: 81  VPFAVLGAYLSSMLPGRELRLIFALLLLYLAYTMARGKNGGHENNGTVHYSRVPLVGILS 140

Query: 167 GFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G +SG LG+ GG+    L   F G  +  A  TS+      A                  
Sbjct: 141 GLVSGLLGISGGVLNVPLFHTFVGIPMRYAVGTSSFALFFTALAGAF------------E 188

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            + LG V++   L++ P  I+   L    ++ +  + L   F+ ++   +   
Sbjct: 189 HYRLGQVDLHMALLLAPGLIIGGRLGALAAHRVRPEVLRKAFAGVLILVALKM 241



 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 7/116 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +   LSG +SGL G+ GG++ VP+             I M  A+GTS   +  T++    
Sbjct: 135 LVGILSGLVSGLLGISGGVLNVPLFHTFV-------GIPMRYAVGTSSFALFFTALAGAF 187

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           EH R G +++ +       L I   + +L    V    L KAFA   +L+ + ML 
Sbjct: 188 EHYRLGQVDLHMALLLAPGLIIGGRLGALAAHRVRPEVLRKAFAGVLILVALKMLL 243


>gi|313896222|ref|ZP_07829775.1| putative membrane protein [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312975021|gb|EFR40483.1| putative membrane protein [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 265

 Score = 99.0 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 55/265 (20%), Positives = 94/265 (35%), Gaps = 22/265 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM-GTSLGVIAPT 81
           I L ++     GT   L G+GGGL+ VP+        GI         + GTSL ++   
Sbjct: 5   ILLFLILGVFVGTFGTLVGIGGGLICVPIFIFFLSDGGIYPYFHTAAQITGTSLVIVLAN 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++     + R   +       +         + S ++       L  +F  F L+M  +M
Sbjct: 65  ALSGTAAYIRQKRVYFPAAVPFALATLPGAFLGSYIVDDFTGPMLYVSFGAFLLIMACMM 124

Query: 142 LKRDRLYCE---RKFPDNY-----VKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASI 192
                        + P N+     +     +  GFLS   G+GGG+    LM++     +
Sbjct: 125 YWNATHKTHVDVHELPANFTFNRSLGIGSSLGVGFLSSIFGIGGGVIHVPLMVYLLNFPV 184

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           + ATATS  V A  A   ++  ++            LG V     + I   + +   +  
Sbjct: 185 HAATATSHFVLAASAAFGVISHVW------------LGHVIWTPAICISIGAAVGAQIGA 232

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
            LS     K +    +  MF     
Sbjct: 233 ALSRKAKSKMILTLLAAAMFALGLR 257



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I +S   G LS +FG+GGG++ VP++              +H A  TS  V+A ++  
Sbjct: 149 LGIGSSLGVGFLSSIFGIGGGVIHVPLMVYLLNF-------PVHAATATSHFVLAASAAF 201

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + H   G +             +   + + +        +    A     +G+ ++
Sbjct: 202 GVISHVWLGHVIWTPAICISIGAAVGAQIGAALSRKAKSKMILTLLAAAMFALGLRLI 259



 Score = 35.8 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 37/128 (28%), Gaps = 21/128 (16%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS---------IYKATATSAGVSALIAFPA 210
            I G+  G     +G+GGG+    + +F+ +            + T TS  +    A   
Sbjct: 9   LILGVFVGTFGTLVGIGGGLICVPIFIFFLSDGGIYPYFHTAAQITGTSLVIVLANALSG 68

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
               I                V   A +     ++    L + +        L + F   
Sbjct: 69  TAAYIRQKR------------VYFPAAVPFALATLPGAFLGSYIVDDFTGPMLYVSFGAF 116

Query: 271 MFTTSFVF 278
           +   + + 
Sbjct: 117 LLIMACMM 124


>gi|290509430|ref|ZP_06548801.1| hypothetical protein HMPREF0485_01201 [Klebsiella sp. 1_1_55]
 gi|289778824|gb|EFD86821.1| hypothetical protein HMPREF0485_01201 [Klebsiella sp. 1_1_55]
          Length = 263

 Score = 98.6 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 3/228 (1%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I +I +A F +G  + LFG GGG V+VP + +            MHVA+ TS  V+ 
Sbjct: 1   MNDIVIIALAGFTTGITTVLFGFGGGFVVVPFVYQLMLRQPELAGNAMHVAVATSTAVMI 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      + R G +  + L   ++ + I  VV S +   + +  +   F ++ L    
Sbjct: 61  FNAGWVSYRNWRAGRLAAQTLFPLLWFIAIGAVVGSCLAGILSEKIVRALFILYMLATIS 120

Query: 140 LMLKRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             L R   +    R+     V    GMV G ++  LGVGG + T  L+  +G  + +  +
Sbjct: 121 DCLLRKGFFRGSARRRLSLPVVTGGGMVIGMIAALLGVGGSVMTVPLLRRHGYEMQECVS 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
            S  +S  +A    +     GW    L    LGF+++  + +++    
Sbjct: 181 ASNPLSLPVALCGAVTYAVIGWHSIPL-SGFLGFISLKILGLLVLTGW 227


>gi|206580459|ref|YP_002238404.1| hypothetical protein KPK_2573 [Klebsiella pneumoniae 342]
 gi|206569517|gb|ACI11293.1| putative membrane protein [Klebsiella pneumoniae 342]
          Length = 263

 Score = 98.6 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 3/228 (1%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I +I +A F +G  + LFG GGG V+VP + +            MHVA+ TS  V+ 
Sbjct: 1   MNDIVIIALAGFTTGITTVLFGFGGGFVVVPFVYQLMLRQPELAGNAMHVAVATSTAVMI 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      + R G +  + L   ++ + I  VV S +   + +  +   F ++ L    
Sbjct: 61  FNAGWVSYRNWRAGKLAAQTLFPLLWFIAIGAVVGSCLAGILSEKIVRALFILYMLATIS 120

Query: 140 LMLKRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             L R   +    R+     V    GMV G ++  LGVGG + T  L+  +G  + +  +
Sbjct: 121 DCLLRKGFFRGSARRRLSLPVVTGGGMVIGMIAALLGVGGSVMTVPLLRRHGYEMQECVS 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
            S  +S  +A    +     GW    L    LGF+++  + +++    
Sbjct: 181 ASNPLSLPVALCGAVTYAVIGWHSIPL-SGFLGFISLKILGLLVLTGW 227


>gi|254468387|ref|ZP_05081793.1| conserved domain protein, putative [beta proteobacterium KB13]
 gi|207087197|gb|EDZ64480.1| conserved domain protein, putative [beta proteobacterium KB13]
          Length = 264

 Score = 98.6 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 110/260 (42%), Gaps = 9/260 (3%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG-IDDSICMHVAMGTSLGVIAPT 81
           I ++     + G L+GLFG+GGGL++VP+++        +  +      +G+S+  I  T
Sbjct: 4   ILILCSTGIVVGFLAGLFGIGGGLIIVPIVTFLMIHFNDLPSADAYAYGIGSSMLSIIFT 63

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             M+   H ++   N   + + I  L   +++ S +I   +  FL   F  +C    + +
Sbjct: 64  GSMATFFHIKNNNFNFSYVSNVIGYLFFGSLIGSYIIYFANFYFLKYFFIFYCFFSALKL 123

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L R  L      P   + +I+    G LS  +G+GGG      +      I  A ++S+ 
Sbjct: 124 LNRANLNFLYSLPLKPISFIF----GALSSIVGIGGGTLFVPYLEAKKIDIKLAISSSSL 179

Query: 202 VSALIAFPALLVRIYSGWGLNGLP----PWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +  +I    LL  +     L   P     +  G + I + + +   SI    ++TKL   
Sbjct: 180 LGVVIGIGTLLGFVSQKLILETTPLLNSFFDYGNIYIKSFIFLTLPSIFTIFISTKLLVS 239

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           + +  +   F+ ++     +
Sbjct: 240 LNQNIIKKLFAYLLICIGLI 259


>gi|229010208|ref|ZP_04167418.1| hypothetical protein bmyco0001_6730 [Bacillus mycoides DSM 2048]
 gi|228751058|gb|EEM00874.1| hypothetical protein bmyco0001_6730 [Bacillus mycoides DSM 2048]
          Length = 257

 Score = 98.6 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 103/263 (39%), Gaps = 17/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLTVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGF-AGYTSHEVSGITAIQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + V S   + +++  +N  + +   +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKTLVVYMGASILIGSFVGSFSANLLNEHAVNVVYTLLATIAAI 119

Query: 140 LMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKA 195
           +M    R   +R      + ++  +   + G +SG +G GG      +ML      I   
Sbjct: 120 MMFIPKRSNRKRTEGITYNKWLASLLAFIVGSVSGIIGAGGAFLLVPIMLVVLKLPIRTT 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            ATS  ++ + +      ++ +G             V I A++ +   S+   PL  ++ 
Sbjct: 180 IATSIAITFISSIGITTGKVITGQ-----------IVVIPALI-VAIASLFAAPLGVRVG 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
             + +K L    S ++  T+   
Sbjct: 228 KRVNQKVLQYVLSTLIVGTAIKM 250



 Score = 40.4 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  + +F+ G++SG+ G GG  ++VP++    +L        +   + TS+ +   +S+
Sbjct: 140 WLASLLAFIVGSVSGIIGAGGAFLLVPIMLVVLKL-------PIRTTIATSIAITFISSI 192

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                    G I +               +   +   V++  L    +   +   I M 
Sbjct: 193 GITTGKVITGQIVVIPALIVAIASLFAAPLGVRVGKRVNQKVLQYVLSTLIVGTAIKMW 251


>gi|229056545|ref|ZP_04195952.1| hypothetical protein bcere0026_6680 [Bacillus cereus AH603]
 gi|228720758|gb|EEL72315.1| hypothetical protein bcere0026_6680 [Bacillus cereus AH603]
          Length = 257

 Score = 98.2 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 104/263 (39%), Gaps = 17/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLTVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGF-AGYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + V S   + +++  +N  + I   +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKTLVVYMGASILIGSFVGSFSANLLNEHAVNVVYTILATIAAI 119

Query: 140 LML---KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKA 195
           +M    + DR   E    + ++  +   + G +SG +G GG      +ML      I   
Sbjct: 120 MMFIPKRSDRKGSEGIMYNKWLASLLAFIVGSVSGIIGAGGAFLLVPIMLVVLKLPIRTT 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            ATS  ++ + +      ++ +G             V I A++ +   S+   PL  K+ 
Sbjct: 180 IATSIAITFISSIGITTGKVITGQ-----------IVVIPALI-VAIASLFAAPLGVKVG 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
             + +K L    S ++  T+   
Sbjct: 228 KRLNQKILQYVLSALIVGTAIKM 250



 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 44/121 (36%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  + +F+ G++SG+ G GG  ++VP++    +L        +   + TS+ +   +S+
Sbjct: 140 WLASLLAFIVGSVSGIIGAGGAFLLVPIMLVVLKL-------PIRTTIATSIAITFISSI 192

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G I +               +   +   +++  L    +   +   I M  
Sbjct: 193 GITTGKVITGQIVVIPALIVAIASLFAAPLGVKVGKRLNQKILQYVLSALIVGTAIKMWI 252

Query: 144 R 144
            
Sbjct: 253 D 253


>gi|52081735|ref|YP_080526.1| hypothetical protein BL02149 [Bacillus licheniformis ATCC 14580]
 gi|52787121|ref|YP_092950.1| hypothetical protein BLi03429 [Bacillus licheniformis ATCC 14580]
 gi|319647651|ref|ZP_08001869.1| YunE protein [Bacillus sp. BT1B_CT2]
 gi|52004946|gb|AAU24888.1| conserved protein YunE [Bacillus licheniformis ATCC 14580]
 gi|52349623|gb|AAU42257.1| YunE [Bacillus licheniformis ATCC 14580]
 gi|317389992|gb|EFV70801.1| YunE protein [Bacillus sp. BT1B_CT2]
          Length = 273

 Score = 97.8 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 51/274 (18%), Positives = 106/274 (38%), Gaps = 32/274 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++I+  F++GT+  L G+GGG+V+VP L     L  + D +   +A+GTSL VI  T +
Sbjct: 4   LILIILGFIAGTIGSLVGLGGGIVIVPSLLFLAGLPTLFDHVTPQMAVGTSLVVIIFTGL 63

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + ++ T++ K    +       ++V + + ++      +  F IF +L+ + ++ 
Sbjct: 64  SSTIAYMKYKTVDYKSGLIFFIGSGPGSIVGAHVSTYFSSDSFSLWFGIFMILISLSLMI 123

Query: 144 RDRLYCERKFPDNYVKYIWG-----------MVTGFLSGAL---------GVGGGIFTNL 183
           + R+    K     ++   G            + G                 GG +    
Sbjct: 124 KKRVKPAEKKHTGVIRTFTGDEGQEYTYSYHPLAGIAIAFFVGFLGGLFGIGGGSLMVPA 183

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           ++L +      A ATS  +  L +       + S            G VN    L ++P 
Sbjct: 184 MILLFLFPTRVAVATSMFIIFLSSVAGSAGHVIS------------GHVNWLYALALIPG 231

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           +     L   ++  +  K + +    ++      
Sbjct: 232 AWFGGQLGAYINKKMQTKTIVLIMRFVLILIGIR 265



 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 7/98 (7%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP +   F            VA+ TS+ +I  +SV     H   G +N       I  
Sbjct: 179 LMVPAMILLFLF-------PTRVAVATSMFIIFLSSVAGSAGHVISGHVNWLYALALIPG 231

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                 + + +   +    +        +L+GI ++ +
Sbjct: 232 AWFGGQLGAYINKKMQTKTIVLIMRFVLILIGIRLIYQ 269


>gi|187931262|ref|YP_001891246.1| domain of unknown function, putative [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187712171|gb|ACD30468.1| domain of unknown function, putative [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 252

 Score = 97.8 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 106/257 (41%), Gaps = 8/257 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I    +  F++  +S L G G GL+ VP             +  M +A+ T  G+    
Sbjct: 2   LIIFGAIVGFVASFMSTLLGGGAGLIAVPAFYFIIVHT-YGPNFAMQIALATCCGMSIFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             ++  +H + G I++  LK ++  L I  ++ S++  +++   L   FAI     GI M
Sbjct: 61  GSIATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKYINIELLKMVFAILLFGSGIWM 120

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +  +      K P +    I+    G LS         F  +  +  G ++ KA A ++ 
Sbjct: 121 ILYNDNKV-IKLPRSARYSIFSFC-GLLSVLAS--STTFATMFFIKIGTNLKKAIAITSV 176

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              + +  A        +G+N   P + G++++  ++     ++  + LA     +I  K
Sbjct: 177 CVVINSSVATF---VLTYGININVPLTFGYLSVPLLISSGLFALAGSLLAINYLGIISPK 233

Query: 262 YLTIGFSMIMFTTSFVF 278
            L   F  +MF ++ V 
Sbjct: 234 LLKNLFITLMFVSAIVM 250


>gi|269839386|ref|YP_003324078.1| hypothetical protein Tter_2357 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269791116|gb|ACZ43256.1| protein of unknown function DUF81 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 255

 Score = 97.8 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 96/256 (37%), Gaps = 20/256 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++  F  G L  L G GGG ++VP+L   +                 SL V+   +   
Sbjct: 10  LVIIGFCVGALGTLIGAGGGFLLVPILLLMY------PHESAKTITAISLAVVWLNATAG 63

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + + R   I+      +        V+ +L+  ++ +S  +  F +  L +   +  R 
Sbjct: 64  SVAYARMRRIDYHRGTIFAVASAPGAVLGALVTRYIPRSVFDPLFGLVLLALSTYIFVRG 123

Query: 146 RLYCERKFP---DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAG 201
           +       P   +  +  +     GFLS  LG+GGGI    L++       + ATATS  
Sbjct: 124 KAPEGSSRPAHVNVPLGAVLSFGVGFLSSLLGIGGGIIHVPLLVQLLDYPTHIATATSHF 183

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           + A+++F   +  I +G    G              L +    +   P+  +LS  +G K
Sbjct: 184 ILAIMSFVGTVTHIVTGEFTTG----------WRRTLALGMGVLAGAPVGARLSQRLGGK 233

Query: 262 YLTIGFSMIMFTTSFV 277
            +    ++ +      
Sbjct: 234 TILRALALGLMLVGIR 249



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 9/124 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L  V SF  G LS L G+GGG++ VP+L +             H+A  TS  ++A  S
Sbjct: 137 VPLGAVLSFGVGFLSSLLGIGGGIIHVPLLVQLL-------DYPTHIATATSHFILAIMS 189

Query: 83  VMSFMEHRRHGTIN--MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  + H   G      +        +     V + +   +    + +A A+  +L+GI 
Sbjct: 190 FVGTVTHIVTGEFTTGWRRTLALGMGVLAGAPVGARLSQRLGGKTILRALALGLMLVGIR 249

Query: 141 MLKR 144
           +L R
Sbjct: 250 LLLR 253


>gi|295395636|ref|ZP_06805828.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294971452|gb|EFG47335.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 266

 Score = 97.8 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 24/256 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +++    +G +SGLFGVGGG ++VP+L            +   +A GTS+  I PT++
Sbjct: 12  ISLLLIGAFTGLMSGLFGVGGGFIIVPLLLLL--------GMKQKLAAGTSVTAILPTAI 63

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +  + +   G ++          + + T V   ++  + +S L   F +  LL+   +  
Sbjct: 64  VGAIGYMTLGQVDWLAAILLATGMIVGTQVGGRLLQILPESVLFWMFLVALLLIIPSLFL 123

Query: 144 ---RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATS 199
                  + +       +  I G++ G LS  LGVGGGI    ++ L +GA+   A  TS
Sbjct: 124 VVPSRDAHIDITVVVGILLVITGVIVGILSALLGVGGGIVMVPVLVLLFGANDLVAKGTS 183

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                L+  P  +      +            V++ A  I+   + +++PL   L+  I 
Sbjct: 184 ----LLMMIPGSISATTVNYRNKN--------VDLKAAAIVGITASVVSPLGIWLAEFIT 231

Query: 260 KKYLTIGFSMIMFTTS 275
            K     FS+++  T+
Sbjct: 232 PKQSNYAFSLLLIFTA 247



 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 7/128 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+++   + G LS L GVGGG+VMVPVL   F    +       VA GTSL ++ P S+
Sbjct: 140 ILLVITGVIVGILSALLGVGGGIVMVPVLVLLFGANDL-------VAKGTSLLMMIPGSI 192

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   + R+  +++K          + + +   +   +     N AF++  +   + ++ 
Sbjct: 193 SATTVNYRNKNVDLKAAAIVGITASVVSPLGIWLAEFITPKQSNYAFSLLLIFTAVQLIA 252

Query: 144 RDRLYCER 151
           R   +  R
Sbjct: 253 RRYPHWVR 260



 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 44/120 (36%), Gaps = 12/120 (10%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
                 + G  TG +SG  GVGGG     L+L  G     A  TS       A    +  
Sbjct: 10  SPISLLLIGAFTGLMSGLFGVGGGFIIVPLLLLLGMKQKLAAGTSVTAILPTAIVGAIGY 69

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +            +LG V+  A +++    I+ T +  +L  ++ +  L   F + +   
Sbjct: 70  M------------TLGQVDWLAAILLATGMIVGTQVGGRLLQILPESVLFWMFLVALLLI 117


>gi|152983957|ref|YP_001350070.1| hypothetical protein PSPA7_4728 [Pseudomonas aeruginosa PA7]
 gi|254245044|ref|ZP_04938366.1| hypothetical protein PA2G_05928 [Pseudomonas aeruginosa 2192]
 gi|126198422|gb|EAZ62485.1| hypothetical protein PA2G_05928 [Pseudomonas aeruginosa 2192]
 gi|150959115|gb|ABR81140.1| membrane protein, putative [Pseudomonas aeruginosa PA7]
          Length = 271

 Score = 97.8 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 10/267 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSLGV 77
           +  L+ +   L+G  + LFG GGG V+VP+L    QL    D       M VA+ TS  V
Sbjct: 2   FYLLLFLCGCLTGVSAVLFGFGGGFVVVPLLYHLLQLGRAADDPLAQAAMQVAVATSTCV 61

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +   + ++   HRR G++    +      + I  V+ + ++      F+  AF  +  + 
Sbjct: 62  MIVNAALATYRHRRAGSLLRAYVWPLGAYIGIGAVLGAALVGLASGDFIRLAFVAYLAIT 121

Query: 138 GILMLKRDRLYC-----ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
            +  L R          + +        + G + G ++  LGVGG + T  L+   G S+
Sbjct: 122 ILDCLLRRGFLSRAEERQARPLGVGETRLGGTLIGAIATFLGVGGSVMTVPLLRRCGLSM 181

Query: 193 YKATATSAGVSALIAFPALLVRIY-SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
            +AT+ +  +S  +A    L  +  +G+   GL    +G++++ A   +     L   LA
Sbjct: 182 TQATSMANPLSLPVALGGTLTYLVLAGYQEQGLGRGFVGYIDLLAFATLAGGGWLGIRLA 241

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           T L   I        +  ++       
Sbjct: 242 TPLIGRIPDALHARVYVGLLAAVMLSM 268


>gi|288935380|ref|YP_003439439.1| hypothetical protein Kvar_2517 [Klebsiella variicola At-22]
 gi|288890089|gb|ADC58407.1| protein of unknown function DUF81 [Klebsiella variicola At-22]
          Length = 263

 Score = 97.8 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 3/228 (1%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I +I +A F +G  + LFG GGG V+VP + +            MHVA+ TS  V+ 
Sbjct: 1   MNDIVIIALAGFTTGITTVLFGFGGGFVVVPFVYQLMLRQPELAGNAMHVAVATSTAVMI 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      + R G +  + L   ++ + I  VV S +   + +  +   F ++ L    
Sbjct: 61  FNAGWVSYRNWRAGRLAAQTLFPLLWFIAIGAVVGSCLAGILSEKIVRALFILYMLATIS 120

Query: 140 LMLKRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             L R   +    R+     V    GMV G ++  LGVGG + T  L+  +G  + +  +
Sbjct: 121 DCLLRKGFFSGSARRRLSLPVVTGGGMVIGMIAALLGVGGSVMTVPLLRRHGYEMQECVS 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
            S  +S  +A    +     GW    L    +GF+++  + +++    
Sbjct: 181 ASNPLSLPVALCGAVTYAVIGWHSIPL-SGFVGFISLKILGLLVLTGW 227


>gi|307544236|ref|YP_003896715.1| hypothetical protein HELO_1646 [Halomonas elongata DSM 2581]
 gi|307216260|emb|CBV41530.1| K07090 [Halomonas elongata DSM 2581]
          Length = 269

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 96/236 (40%), Gaps = 9/236 (3%)

Query: 48  MVPVLSKAFQLMGIDDS----ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDW 103
           MVP+L          DS    + MH+A+ TS  V+   + ++   H R GT++ + ++  
Sbjct: 27  MVPLLYAVLLATHGADSAVGQVAMHIAVATSTSVMIVGAGLATRRHHRAGTLDWRWIRPL 86

Query: 104 IFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD----RLYCERKFPDNYVK 159
           +  + I  +  +     +   ++  AF  +  +  +  L R           + P N   
Sbjct: 87  VGYIAIGAIAGAATAMAMRGDWVRWAFIAYLAITILDALLRPGFLAHTAAPPRTPSNGAM 146

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            ++G+  G ++  LGVGG + T  LM   G  + +ATA +  +S  +A       +    
Sbjct: 147 AVFGLGIGMVAALLGVGGSVMTVPLMRRRGLPMARATAMATPLSLPMALAGTAAYMLLAR 206

Query: 220 GLNGLP-PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           G   +  PW  G+V++ A+  +   S +   LA+     +        +  ++   
Sbjct: 207 GELAVQGPWQAGYVDLRALAALAAGSWIGIRLASPWIGRLPDGIHARAYLALLAGV 262


>gi|295705457|ref|YP_003598532.1| hypothetical protein BMD_3342 [Bacillus megaterium DSM 319]
 gi|294803116|gb|ADF40182.1| putative membrane protein [Bacillus megaterium DSM 319]
          Length = 258

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 112/263 (42%), Gaps = 18/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +I  + +  F+   +SG+ G+GG ++  P+L     L+G++ ++  H   G     + 
Sbjct: 3   LTFIITLFLIGFIGSFISGMVGIGGSVINYPMLLYIPPLVGVE-ALTAHQVSGAGAIQVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++     +R+ G +N  ++      + I +++ S    ++++  LN  + +  L+  I
Sbjct: 62  FATLGGVWAYRKSGFLNKSLILYMGSNILIGSMLGSYSSHYMNEQGLNVVYGVLALIAVI 121

Query: 140 LMLKRDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYK 194
           +M    +    +   +   +  +  I  ++ G ++G LG GG      +ML         
Sbjct: 122 MMFIPKKKLDEIKEGKLQFNKGLASILSLLIGAVAGVLGAGGAFILVPVMLVVLKIPTRI 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             ATS  V+ + +  + + ++ +                I A++++   S++ +P+  K+
Sbjct: 182 TIATSLAVTFISSIGSTIGKLITHQVP-----------FIPALILVA-ASLIASPIGAKV 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K L    + ++  T+  
Sbjct: 230 GQKMNTKVLQWILAGLILATAIK 252



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 46/120 (38%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L  + S L G ++G+ G GG  ++VPV+    +       I   + + TSL V   +S+ 
Sbjct: 144 LASILSLLIGAVAGVLGAGGAFILVPVMLVVLK-------IPTRITIATSLAVTFISSIG 196

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S +       +        +    I + + + +   ++   L    A   L   I +  R
Sbjct: 197 STIGKLITHQVPFIPALILVAASLIASPIGAKVGQKMNTKVLQWILAGLILATAIKIWWR 256


>gi|152970338|ref|YP_001335447.1| hypothetical protein KPN_01786 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150955187|gb|ABR77217.1| hypothetical protein KPN_01786 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 263

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 3/228 (1%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I +I +A F +G  + LFG GGG V+VP + +            MHVA+ TS  V+ 
Sbjct: 1   MNEIVIIALAGFTTGITTVLFGFGGGFVVVPFVYQLMLRQPAIAGNAMHVAVATSTAVMI 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      + R G +  + L   ++ + I  VV S +   + ++ +   F ++ L    
Sbjct: 61  FNAGWVSYRNWRAGRLAAQTLFPLLWFIAIGAVVGSCLAGILSENIVRALFILYMLATIS 120

Query: 140 LMLKRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             L R   +    R+     V    G++ G ++  LGVGG + T  L+  +G ++ +  +
Sbjct: 121 DCLLRKGFFTGSARRRLSLPVVTGGGVIIGTIAALLGVGGSVMTVPLLRRHGYAMQECVS 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
            S  +S  +A    +     GW    L    LGF+++  + +++    
Sbjct: 181 ASNPLSLPVALCGAVTYAVIGWHSIPL-SGFLGFISLKILSLLVLTGW 227


>gi|239826111|ref|YP_002948735.1| hypothetical protein GWCH70_0568 [Geobacillus sp. WCH70]
 gi|239806404|gb|ACS23469.1| protein of unknown function DUF81 [Geobacillus sp. WCH70]
          Length = 264

 Score = 97.1 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 107/266 (40%), Gaps = 18/266 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  +++I +I +  F+   +SG+ G+GG ++  P+L     L G+  S   H   G S  
Sbjct: 2   ELTLNFIIVIFLIGFIGSFISGMVGIGGSIIKYPMLLYLPPLFGL-ASFSAHEVSGISAV 60

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   ++     +R+ G +N  ++      + I + +       + +  +N  + I   L
Sbjct: 61  QVFFATIGGVWAYRKSGYLNKTLILYMGISILIGSFLGGFGSKVMSEGTINVVYGILAAL 120

Query: 137 MGILMLKRDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
             ++M    +    +  ++   + ++     +V G  SG +G  G       ML      
Sbjct: 121 AAVMMFVPKKGIDDIPSDQVTFNKWLAAALALVIGIGSGIVGAAGAFLLVPTMLVVLKIP 180

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
                A+S  ++ + +  +   +I +G             V +   +I++  S++ +PL 
Sbjct: 181 TRMTIASSLAITFISSIGSTFGKITTGQ------------VELLPSIIMVIASLIASPLG 228

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
            K+   +  K L +  + ++  T+  
Sbjct: 229 AKMGQKMNTKILQVILAFLILATAVK 254



 Score = 42.4 bits (99), Expect = 0.070,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 45/129 (34%), Gaps = 7/129 (5%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  D V     L    + + G  SG+ G  G  ++VP +    +       I   + + +
Sbjct: 135 IPSDQVTFNKWLAAALALVIGIGSGIVGAAGAFLLVPTMLVVLK-------IPTRMTIAS 187

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           SL +   +S+ S       G + +      +    I + + + M   ++   L    A  
Sbjct: 188 SLAITFISSIGSTFGKITTGQVELLPSIIMVIASLIASPLGAKMGQKMNTKILQVILAFL 247

Query: 134 CLLMGILML 142
            L   + + 
Sbjct: 248 ILATAVKIW 256


>gi|328765873|gb|EGF75973.1| hypothetical protein BATDEDRAFT_28917 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 559

 Score = 97.1 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 62/178 (34%), Gaps = 20/178 (11%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP L     +            +G SL  +  T + S + + +   I+ +    ++   
Sbjct: 17  LVPSLFFMQSISDTFSWATPQAIVGISLVTMIFTGLSSTLAYVKGKRIDYRTGLLFLIGS 76

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK-------- 159
               +V S +   ++       F I  +++ +LM  +   +  R  P +           
Sbjct: 77  IPGGIVGSWLNQFINADVFLLYFGILMIVISLLMFIKRDRFTTRLDPASNGMRTFTLQGI 136

Query: 160 -----------YIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSAL 205
                       I  +  G LSG  G+GGG      M L +G   + ATATS  +   
Sbjct: 137 TYQYRVPVLSAIILSLCVGILSGLFGIGGGSIIVPAMILLFGVPAHIATATSMFMIFF 194



 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 7/58 (12%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +   I+ S   G LSGLFG+GGG ++VP +   F        +  H+A  TS+ +I  
Sbjct: 144 VLSAIILSLCVGILSGLFGIGGGSIIVPAMILLF-------GVPAHIATATSMFMIFF 194


>gi|15595987|ref|NP_249481.1| hypothetical protein PA0790 [Pseudomonas aeruginosa PAO1]
 gi|107100252|ref|ZP_01364170.1| hypothetical protein PaerPA_01001276 [Pseudomonas aeruginosa PACS2]
 gi|116048708|ref|YP_792492.1| hypothetical protein PA14_54030 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893266|ref|YP_002442135.1| hypothetical protein PLES_45521 [Pseudomonas aeruginosa LESB58]
 gi|296390858|ref|ZP_06880333.1| hypothetical protein PaerPAb_22005 [Pseudomonas aeruginosa PAb1]
 gi|313105615|ref|ZP_07791881.1| hypothetical protein PA39016_000080051 [Pseudomonas aeruginosa
           39016]
 gi|9946681|gb|AAG04179.1|AE004514_2 hypothetical protein PA0790 [Pseudomonas aeruginosa PAO1]
 gi|115583929|gb|ABJ09944.1| hypothetical protein PA14_54030 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218773494|emb|CAW29306.1| hypothetical protein PLES_45521 [Pseudomonas aeruginosa LESB58]
 gi|310878383|gb|EFQ36977.1| hypothetical protein PA39016_000080051 [Pseudomonas aeruginosa
           39016]
          Length = 271

 Score = 97.1 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 59/267 (22%), Positives = 110/267 (41%), Gaps = 10/267 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSLGV 77
           +  L+ +   L+G  + LFG GGG V+VP+L    QL    D       M VA+ TS  V
Sbjct: 2   FYLLLFLCGCLTGVSAVLFGFGGGFVVVPLLYHLLQLGRAADDPLAQAAMQVAVATSTCV 61

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +   + ++   HRR G++    +      + +  V+ + ++      F+  AF  +  + 
Sbjct: 62  MIVNAALATYRHRRAGSLLRAYVWPLGAYIGVGAVLGAALVGLASGDFIRLAFVAYLAIT 121

Query: 138 GILMLKRDRLYC-----ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
            +  L R          + +        + G + G ++  LGVGG + T  L+   G S+
Sbjct: 122 ILDCLLRRGFLSRAEERQARPLGVGETRLGGTLIGAIATFLGVGGSVMTVPLLRRCGLSM 181

Query: 193 YKATATSAGVSALIAFPALLVRIY-SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
            +AT+ +  +S  +A    L  +  +G+   GL    +G++++ A   +     L   LA
Sbjct: 182 TQATSMANPLSLPVALGGTLTYLVLAGYQEQGLGRGFVGYIDLLAFATLAGGGWLGIRLA 241

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           T L   I        +  ++       
Sbjct: 242 TPLIGRIPDALHARVYVGLLAAVMLSM 268


>gi|49082848|gb|AAT50824.1| PA0790 [synthetic construct]
          Length = 272

 Score = 97.1 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 59/267 (22%), Positives = 110/267 (41%), Gaps = 10/267 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSLGV 77
           +  L+ +   L+G  + LFG GGG V+VP+L    QL    D       M VA+ TS  V
Sbjct: 2   FYLLLFLCGCLTGVSAVLFGFGGGFVVVPLLYHLLQLGRAADDPLAQAAMQVAVATSTCV 61

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +   + ++   HRR G++    +      + +  V+ + ++      F+  AF  +  + 
Sbjct: 62  MIVNAALATYRHRRAGSLLRAYVWPLGAYIGVGAVLGAALVGLASGDFIRLAFVAYLAIT 121

Query: 138 GILMLKRDRLYC-----ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
            +  L R          + +        + G + G ++  LGVGG + T  L+   G S+
Sbjct: 122 ILDCLLRRGFLSRAEERQARPLGVGETRLGGTLIGAIATFLGVGGSVMTVPLLRRCGLSM 181

Query: 193 YKATATSAGVSALIAFPALLVRIY-SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
            +AT+ +  +S  +A    L  +  +G+   GL    +G++++ A   +     L   LA
Sbjct: 182 TQATSMANPLSLPVALGGTLTYLVLAGYQEQGLGRGFVGYIDLLAFATLAGGGWLGIRLA 241

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           T L   I        +  ++       
Sbjct: 242 TPLIGRIPDALHARVYVGLLAAVMLSM 268


>gi|160899168|ref|YP_001564750.1| hypothetical protein Daci_3733 [Delftia acidovorans SPH-1]
 gi|160364752|gb|ABX36365.1| protein of unknown function DUF81 [Delftia acidovorans SPH-1]
          Length = 277

 Score = 97.1 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 61/244 (25%), Positives = 101/244 (41%), Gaps = 9/244 (3%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSI----CMHVAMGTSLGVIA 79
            L++    L+G  + LFG GGG V VP+L      +   DS      MH+A+ TS  V+ 
Sbjct: 13  LLLLAFGVLAGVTTVLFGFGGGFVAVPLLYALLTSIHGADSAVGQAAMHIAVATSTCVMI 72

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             + M+ +   R G +    ++     +    V  +   + +   ++  AF  +  L   
Sbjct: 73  FGASMATLRQHRAGALPWDQVRPLAGFIAAGAVAGAAAATWISGEWVRWAFIAYLALTIA 132

Query: 140 LMLKRDRL----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
             L R           +          G+  G ++  LGVGG + T  LM   GAS+  A
Sbjct: 133 DALLRPGFVHGTAAGMQPMGRRAAATAGLAIGAIAAFLGVGGSVMTVPLMRRRGASMAAA 192

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           TA ++ +S  +A       + +  G  GL PW +G+V++ A  ++   S     LA  L 
Sbjct: 193 TAMASPLSLPMAVAGTAAYMLASQG-AGLGPWHVGYVDLQAFALLTAGSWTGIRLAAPLI 251

Query: 256 YMIG 259
             I 
Sbjct: 252 GRIP 255


>gi|55980754|ref|YP_144051.1| hypothetical protein TTHA0785 [Thermus thermophilus HB8]
 gi|55772167|dbj|BAD70608.1| conserved hypothetical protein [Thermus thermophilus HB8]
          Length = 245

 Score = 97.1 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 95/239 (39%), Gaps = 24/239 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            VM+P++    +L         H A GTSL  +  T ++  + +   G+++ K       
Sbjct: 22  TVMIPLMVGLLKL-------PQHRAHGTSLVAVFFTGLVGALTYGLQGSLDPKAALFLAL 74

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC----ERKFPDNYVKYI 161
              +T    +     + +  L ++F  F + +  L+L R  L        + P +    +
Sbjct: 75  TAILTARFGARFAHGLSERNLKRSFGWFLIAVSFLLLLRPYLAPLGLVRGELPQDLALLL 134

Query: 162 WGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G  TGFLSG +GVGGG      M L  G   + A  TS       +       +  G  
Sbjct: 135 AGAFTGFLSGMMGVGGGTIMVPAMVLLLGMPQHTAQGTSLLAMVPASLVGAHTHLRLGNV 194

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L             L ++P  ++ T L  +L++++ +  L + F+ ++  T + +A
Sbjct: 195 DQDL------------ALGLVPGVLVGTFLGGELAHVLPEGALRLVFAAVLVWTGWRYA 241



 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +++A   +G LSG+ GVGGG +MVP +            +  H A GTSL  + P S+
Sbjct: 130 LALLLAGAFTGFLSGMMGVGGGTIMVPAMVLLL-------GMPQHTAQGTSLLAMVPASL 182

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +    H R G ++  +    +  + + T +   +   + +  L   FA   +  G    +
Sbjct: 183 VGAHTHLRLGNVDQDLALGLVPGVLVGTFLGGELAHVLPEGALRLVFAAVLVWTGWRYAR 242

Query: 144 RDR 146
             R
Sbjct: 243 PGR 245



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 35/120 (29%), Gaps = 17/120 (14%)

Query: 162 WGMVTGF-----LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
            G++ GF            GG +   L++       ++A  TS            L    
Sbjct: 1   MGLLIGFLGGVFGGLVGLGGGTVMIPLMVGLLKLPQHRAHGTSLVAVFFTGLVGALTYGL 60

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            G                 A L +   +IL      + ++ + ++ L   F   +   SF
Sbjct: 61  QGSLDPK------------AALFLALTAILTARFGARFAHGLSERNLKRSFGWFLIAVSF 108


>gi|133757050|ref|YP_001096286.1| hypothetical protein pLEW6932_p17 [Staphylococcus sp. 693-2]
 gi|110084098|gb|ABG49252.1| hypothetical protein [Staphylococcus sp. 693-2]
          Length = 251

 Score = 97.1 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 105/241 (43%), Gaps = 14/241 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++++     G +SGL G+GG +++ P +     L G+  +   ++A G +   + 
Sbjct: 3   ISTVIMMLLIGVFGGFISGLVGIGGSIIIYPAILLLPPLFGV-PAYSAYIASGLTSSQVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +++   ++ R+    +  ++      +   +++ +L+ +  +  F+N  + I  L+  I
Sbjct: 62  FSTLTGSLKARKKTEFSPPLVIYMSGGMITGSMLGALLANLFNAEFVNTIYIIIALIALI 121

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
           LM    +    +   +  +  + G+  G +SG +G GG       L++ +   +    A 
Sbjct: 122 LMFINVKPNLNQSSFNKPLLVMVGLFVGIISGIVGAGGAFIIIPILLVLFKLPMNMVVAN 181

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +  A ++++              G++ +   L ++  SI+  PL  KL   +
Sbjct: 182 SIVIAFISSIGAFIIKLIQ------------GYIPLEDALFLIIGSIIFAPLGLKLGKKV 229

Query: 259 G 259
            
Sbjct: 230 P 230


>gi|238894821|ref|YP_002919555.1| hypothetical protein KP1_2835 [Klebsiella pneumoniae NTUH-K2044]
 gi|238547137|dbj|BAH63488.1| hypothetical protein KP1_2835 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 263

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 3/228 (1%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I +I +A F +G  + LFG GGG V+VP + +            MHVA+ TS  V+ 
Sbjct: 1   MNEIVIIALAGFTTGITTVLFGFGGGFVVVPFVYQLMLRQPAIAGNAMHVAVATSTAVMI 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      + R G +  + L   ++ + I  VV S +   + ++ +   F ++ L    
Sbjct: 61  FNAGWVSYRNWRAGRLAAQTLFPLLWFIAIGAVVGSCLAGILSENIVRALFILYMLATIS 120

Query: 140 LMLKRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             L R   +    R+     V    G++ G ++  LGVGG + T  L+  +G ++ +  +
Sbjct: 121 DCLLRKGFFTGSARRRLSLPVVTGGGVIIGTIAALLGVGGSVMTVPLLRRHGYAMQECVS 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
            S  +S  +A    +     GW    L    LGF+++  + +++    
Sbjct: 181 ASNPLSLPVALCGAVTYAAIGWHSIPL-SGFLGFISLKILGLLVLTGW 227


>gi|330010576|ref|ZP_08306809.1| hypothetical protein HMPREF9538_04508 [Klebsiella sp. MS 92-3]
 gi|328534513|gb|EGF61101.1| hypothetical protein HMPREF9538_04508 [Klebsiella sp. MS 92-3]
          Length = 263

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 100/228 (43%), Gaps = 3/228 (1%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I +I +A F +G  + LFG GGG V+VP + +            MHVA+ TS  V+ 
Sbjct: 1   MNEIVIIALAGFTTGITTVLFGFGGGFVVVPFVYQLMLRQPAIAGNAMHVAVATSTAVMI 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      + R G +  + L   ++ + I  VV S +   + ++ +   F  + L    
Sbjct: 61  FNAGWVSYRNWRAGRLAAQTLFPLLWFIAIGAVVGSCLAGILSENIVRALFIFYMLATIS 120

Query: 140 LMLKRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             L R   +    R+     V    G++ G ++  LGVGG + T  L+  +G ++ +  +
Sbjct: 121 DCLLRKGFFTGSARRRLSLPVVTGGGVIIGTIAALLGVGGSVMTVPLLRRHGYAMQECVS 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
            S  +S  +A    +     GW    L    LGF+++  + +++    
Sbjct: 181 ASNPLSLPVALCGAVTYAVIGWHSIPL-SGFLGFISLKILGLLVLTGW 227


>gi|296109841|ref|YP_003616790.1| protein of unknown function DUF81 [Methanocaldococcus infernus ME]
 gi|295434655|gb|ADG13826.1| protein of unknown function DUF81 [Methanocaldococcus infernus ME]
          Length = 259

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 105/237 (44%), Gaps = 7/237 (2%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            ++VP+L   F  +G+  +  + +A+GTSL  I   S+ S         ++++       
Sbjct: 24  FLLVPILYHYFISLGVPSTTAIKMAIGTSLFTIFLNSLFSLY--FSRHQLDLRSSLHIGI 81

Query: 106 VLPITTVVTSLM-ISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE--RKFPDNYVKYIW 162
                + + + + I    +  + K F  F +++ I ++ +     E  +    N    + 
Sbjct: 82  FGIFGSFIGAYLTIKVFPEYVIKKIFGFFLIILSIYLIFKKHKDIENFQGNICNKKLSLL 141

Query: 163 GMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
           G +TG LS  LG+GGGI     + +     I +A   S G+ ++I FP +++ ++S  G 
Sbjct: 142 GFITGILSSMLGIGGGIIVIPSLNILLSVPIKRAITISIGMISIITFPGVIIYMFSSIGE 201

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                +++G+V++   L +LP  I  + +  ++   I  KYL    ++ +       
Sbjct: 202 FD-SLYNIGYVSLSTSLTLLPFCITFSKVGAQIKDKINTKYLRYLLAIFILIGGLRM 257


>gi|218245793|ref|YP_002371164.1| hypothetical protein PCC8801_0931 [Cyanothece sp. PCC 8801]
 gi|257058839|ref|YP_003136727.1| hypothetical protein Cyan8802_0958 [Cyanothece sp. PCC 8802]
 gi|218166271|gb|ACK65008.1| protein of unknown function DUF81 [Cyanothece sp. PCC 8801]
 gi|256589005|gb|ACU99891.1| protein of unknown function DUF81 [Cyanothece sp. PCC 8802]
          Length = 259

 Score = 96.7 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 15/207 (7%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +V+   +++ +  LSG L+GLFG+GGG+V+VP+L           +     A+ TS   I
Sbjct: 1   MVNNFWILVASGLLSGLLAGLFGIGGGMVLVPLLITL--------NYTPVQAVATSSLAI 52

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS+    ++ R G +++  +    F   IT  +   + + +    L   F I  ++  
Sbjct: 53  IITSISGSWQNWRMGYLDLNRVILLGFPALITAQIGVYIATLLPDYLLLTYFGILLIINI 112

Query: 139 I------LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL-MLFYGAS 191
                   +L +        F     +   G   GFL+G  G+GGG     L ML     
Sbjct: 113 FLGNFNHQLLGKKTSNNSLNFSVTIARLATGGTAGFLAGLFGIGGGAIMVPLQMLLLNEP 172

Query: 192 IYKATATSAGVSALIAFPALLVRIYSG 218
           I  A  TS GV  + A  + +    +G
Sbjct: 173 IKIAIQTSLGVIVITAISSTIGHSITG 199



 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +     +G L+GLFG+GGG +MVP+            +  + +A+ TSLGVI  T++ S 
Sbjct: 140 LATGGTAGFLAGLFGIGGGAIMVPLQMLLL-------NEPIKIAIQTSLGVIVITAISST 192

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + H   G +   +         I   +++  +  +    +   F     ++ I    +
Sbjct: 193 IGHSITGNVLFGVGLIVGVGGLIGAQISTRFLPKLPDQVVRFCFYGLLTILAIYTFWK 250



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 43/101 (42%), Gaps = 12/101 (11%)

Query: 173 LGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
            G+GGG+    L++    +  +A ATS+    + +           W       W +G++
Sbjct: 22  FGIGGGMVLVPLLITLNYTPVQAVATSSLAIIITSISGS-------WQN-----WRMGYL 69

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
           ++  V+++   +++   +   ++ ++    L   F +++  
Sbjct: 70  DLNRVILLGFPALITAQIGVYIATLLPDYLLLTYFGILLII 110


>gi|254167965|ref|ZP_04874813.1| conserved domain protein, putative [Aciduliprofundum boonei T469]
 gi|289595963|ref|YP_003482659.1| protein of unknown function DUF81 [Aciduliprofundum boonei T469]
 gi|197623008|gb|EDY35575.1| conserved domain protein, putative [Aciduliprofundum boonei T469]
 gi|289533750|gb|ADD08097.1| protein of unknown function DUF81 [Aciduliprofundum boonei T469]
          Length = 254

 Score = 96.7 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 88/215 (40%), Gaps = 13/215 (6%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I  + A+ + L +   +S ++F  +     ++ KI++  + VL   + + +    ++   
Sbjct: 46  IPPYFALASPLPMTLISSSIAFKRYHSEKLVDWKIVEKMLVVLIPGSFIGAYATKYISGK 105

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
            L    A+F + + I ++        +     +V  + G V G LSG L  GGGI    +
Sbjct: 106 ILMMLTAVFLVYIAIRLIISGN-KERKMEKRMWVILLVGFVIGLLSGLLANGGGILIVPI 164

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           ++  G SI KA  +S  +    A P++            L  W LG ++    L +   +
Sbjct: 165 LVLLGMSIKKAIGSSVAMVLFAAIPSI------------LVHWYLGHIDWLITLGLTIGA 212

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           I    +   ++    KK L   + + +   S  FA
Sbjct: 213 IPGAYIGAWITVNADKKKLRKIYGIFLLLFSIYFA 247


>gi|163938698|ref|YP_001643582.1| hypothetical protein BcerKBAB4_0692 [Bacillus weihenstephanensis
           KBAB4]
 gi|229131719|ref|ZP_04260596.1| hypothetical protein bcere0014_6720 [Bacillus cereus BDRD-ST196]
 gi|163860895|gb|ABY41954.1| protein of unknown function DUF81 [Bacillus weihenstephanensis
           KBAB4]
 gi|228651773|gb|EEL07733.1| hypothetical protein bcere0014_6720 [Bacillus cereus BDRD-ST196]
          Length = 257

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 102/263 (38%), Gaps = 17/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLTVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGF-AGYTSHEVSGITAIQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + V S   + +++  +N  + +   +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKTLVVYMGASILIGSFVGSFSANLLNEHAVNVVYTLLATIAAI 119

Query: 140 LMLKRDRLY---CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKA 195
           +M    R      E    + ++  +   + G +SG +G GG      +ML      I   
Sbjct: 120 MMFIPKRSNRKGTEGITYNKWLASLLAFIVGSVSGIIGAGGAFLLVPIMLVVLKLPIRTT 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            ATS  ++ + +      ++ +G             V I A++ +   S+   PL  ++ 
Sbjct: 180 IATSIAITFISSIGITTGKVITGQ-----------IVVIPALI-VAIASLFAAPLGVRVG 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
             + +K L    S ++  T+   
Sbjct: 228 KRVNQKVLQYVLSTLIVGTAIKM 250



 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  + +F+ G++SG+ G GG  ++VP++    +L        +   + TS+ +   +S+
Sbjct: 140 WLASLLAFIVGSVSGIIGAGGAFLLVPIMLVVLKL-------PIRTTIATSIAITFISSI 192

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                    G I +               +   +   V++  L    +   +   I M 
Sbjct: 193 GITTGKVITGQIVVIPALIVAIASLFAAPLGVRVGKRVNQKVLQYVLSTLIVGTAIKMW 251


>gi|242239218|ref|YP_002987399.1| hypothetical protein Dd703_1781 [Dickeya dadantii Ech703]
 gi|242131275|gb|ACS85577.1| protein of unknown function DUF81 [Dickeya dadantii Ech703]
          Length = 254

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 94/230 (40%), Gaps = 18/230 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G+   +  H+A GT+L +I P  ++ F+ +R+   I+ ++         +++ + 
Sbjct: 34  AIPVLGMLFGMNQHIAQGTALIMITPNVLIGFLRYRQRNRIDTRMTLILCGFATVSSYLA 93

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLK-----RDRLYCERKFPDNYVKYIWGMVTGFL 169
           + + S +    L KAFA+F L++ +  +      R                + G+ +GF+
Sbjct: 94  AHVASLIPVDNLQKAFAVFLLVLAVYYIGQWFKSRHHHRAATALLSPRYLPVLGVASGFM 153

Query: 170 SGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG   VGGG+     L+  +G +  +A   +  +    A  AL           G   W+
Sbjct: 154 SGIFTVGGGLVVVPALVTLFGFTQTQAQGIALALVVPGALAALASY-----AQAGNVDWA 208

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            G       L +    IL       L++ +   +L + F +++   +   
Sbjct: 209 TG-------LPLALGGILSVSWGVALAHRLPVSFLRLAFCLVLLGVALTM 251



 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            + V    SG +SG+F VGGGLV+VP L   F             A G +L ++ P ++ 
Sbjct: 142 YLPVLGVASGFMSGIFTVGGGLVVVPALVTLFGF-------TQTQAQGIALALVVPGALA 194

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +   + + G ++            ++      +   +  SFL  AF +  L + + ML +
Sbjct: 195 ALASYAQAGNVDWATGLPLALGGILSVSWGVALAHRLPVSFLRLAFCLVLLGVALTMLWK 254


>gi|300715754|ref|YP_003740557.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
 gi|299061590|emb|CAX58705.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 262

 Score = 96.3 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 98/228 (42%), Gaps = 3/228 (1%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I +I +A F +G  + LFG GGG V+VP + +            +H+A+ TS  V+ 
Sbjct: 1   MNDIVIIALAGFTTGITTVLFGFGGGFVVVPFVYQLLLRQPDVAGNALHIAVATSTAVMI 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      + R G ++ +IL   +  + I  V  S +   + ++ +   F ++ ++   
Sbjct: 61  FNAGWVSYRNWRAGKLSSQILFPLLGFIAIGAVAGSWLAGTIGEALIRGLFIVYMVVAIA 120

Query: 140 LMLKRDRL--YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             L R         +          G++ G ++  LG+GG + T  L+  +G ++    +
Sbjct: 121 DCLLRKGFIGGSAPRRLAPVTVTGGGVLIGMIAALLGLGGSVMTVPLLRRHGHTMRDCIS 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
            +  +S  +A         SGW       + LGF+N+  + +++    
Sbjct: 181 AANPLSLPVALCGATTYAISGWHHMPASGY-LGFINLKILAVLVLTGW 227


>gi|56707958|ref|YP_169854.1| hypothetical protein FTT_0851 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670429|ref|YP_666986.1| hypothetical protein FTF0851 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|56604450|emb|CAG45484.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110320762|emb|CAL08867.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. tularensis FSC198]
 gi|282159144|gb|ADA78535.1| hypothetical protein NE061598_04880 [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 252

 Score = 96.3 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 105/257 (40%), Gaps = 8/257 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I    +  F++  +S L G G GL+ VP             +  M +A+ T  G+    
Sbjct: 2   LIIFGAIVGFVASFMSTLLGGGAGLIAVPAFYFIIVHT-YGPNFAMQIALATCCGMSIFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             ++  +H + G I++  LK ++  L I  ++ S+++ +++   L   FAI     GI M
Sbjct: 61  GSIATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIVKYINTELLKMVFAILLFGSGIWM 120

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +  +      K P +    I+    G LS         F  +  +  G ++ KA A ++ 
Sbjct: 121 ILYNDNKV-IKLPRSARYSIFSFC-GLLSVLAS--STTFATMFFIKIGTNLKKAIAITSV 176

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              + +  A        +G+N   P +   +++  ++     ++  + LA     +I  K
Sbjct: 177 CVVINSSVATF---VLTYGININVPLTFSHLSVPLLISSGLFALAGSLLAVNYLGIISPK 233

Query: 262 YLTIGFSMIMFTTSFVF 278
            L   F  +MF ++ V 
Sbjct: 234 LLKNLFITLMFVSAIVM 250


>gi|299538197|ref|ZP_07051482.1| hypothetical protein BFZC1_19360 [Lysinibacillus fusiformis ZC1]
 gi|298726399|gb|EFI66989.1| hypothetical protein BFZC1_19360 [Lysinibacillus fusiformis ZC1]
          Length = 258

 Score = 95.9 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 103/250 (41%), Gaps = 18/250 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +I  I++  FL   +SG+ G+GG ++  P+L     L+G   +   H   G S   + 
Sbjct: 3   IAWILTILLIGFLGSFVSGMLGIGGAIINFPMLLYIPPLLGF-AAFSAHEVSGISAIQVL 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++     +R+ G +N  ++      + + + V S     + +S +N  + I  L+  +
Sbjct: 62  FAALSGVWVYRKGGYLNKSLIIYMGSAILMGSFVGSFGSKFLSESGINIVYGILALIAAV 121

Query: 140 LMLKRDRLYCERKF----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYK 194
           +M    +   ++       +  +  +   V G  SG +G  GG     +ML   G     
Sbjct: 122 MMFIPKKQIDDKPMQAVTFNKPLAVLLAFVVGIGSGIVGAAGGFLLVPIMLVVLGIPTRM 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             A+S  ++ + +    + ++ +G                 A+++I+  S++  PL  ++
Sbjct: 182 TIASSLAITFISSIGGTIGKLMTGQVE-----------YYPALILIVS-SLIAAPLGARI 229

Query: 255 SYMIGKKYLT 264
              +  K+L 
Sbjct: 230 GGKLNTKFLQ 239



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 46/118 (38%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L ++ +F+ G  SG+ G  GG ++VP++            I   + + +SL +   +S+ 
Sbjct: 144 LAVLLAFVVGIGSGIVGAAGGFLLVPIMLVVL-------GIPTRMTIASSLAITFISSIG 196

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +     G +        I    I   + + +   ++  FL    AI  L   I + 
Sbjct: 197 GTIGKLMTGQVEYYPALILIVSSLIAAPLGARIGGKLNTKFLQIILAILILATAIKIW 254


>gi|229165721|ref|ZP_04293489.1| hypothetical protein bcere0007_6980 [Bacillus cereus AH621]
 gi|228617722|gb|EEK74779.1| hypothetical protein bcere0007_6980 [Bacillus cereus AH621]
          Length = 257

 Score = 95.9 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 103/263 (39%), Gaps = 17/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLTVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGF-AGYTSHEVSGITAIQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + V S   + +++  +N  + +   +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKTLVVYMGASILIGSFVGSFSANLLNEHAVNVVYTLLATIAAI 119

Query: 140 LMLKRDRLY---CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKA 195
           +M    R      E    + ++  +   + G +SG +G GG      +ML      I   
Sbjct: 120 MMFIPKRSNRKGTEGITYNKWLASLLAFIVGSVSGIIGAGGAFLLVPIMLVVLKLPIRTT 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            ATS  ++ + +      ++ +G             V I A++ +   S+   PL  ++ 
Sbjct: 180 IATSIAITFISSIGITTGKVITGQ-----------IVVIPALI-VAIASLFAAPLGVRVG 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
             + +K L    S+++  T+   
Sbjct: 228 KRVNQKVLQYVLSILIVGTAIKM 250



 Score = 40.8 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 45/121 (37%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  + +F+ G++SG+ G GG  ++VP++    +L        +   + TS+ +   +S+
Sbjct: 140 WLASLLAFIVGSVSGIIGAGGAFLLVPIMLVVLKL-------PIRTTIATSIAITFISSI 192

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G I +               +   +   V++  L    +I  +   I M  
Sbjct: 193 GITTGKVITGQIVVIPALIVAIASLFAAPLGVRVGKRVNQKVLQYVLSILIVGTAIKMWI 252

Query: 144 R 144
            
Sbjct: 253 D 253


>gi|229188990|ref|ZP_04316018.1| hypothetical protein bcere0002_6760 [Bacillus cereus ATCC 10876]
 gi|228594410|gb|EEK52201.1| hypothetical protein bcere0002_6760 [Bacillus cereus ATCC 10876]
          Length = 254

 Score = 95.5 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 101/260 (38%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFS-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + + +  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKTLVVYMGASILIGSFIGSFGANVLAEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    +        + ++  +   + G +SG +G GG      +ML      +    AT
Sbjct: 120 MMFVPKKNNSGAVHYNKWLASLLAFIVGGVSGIIGAGGAFLLVPIMLVILKLPLRTTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSIGITTGKVITGQ------------VVVIPALIIAIASIFAAPLGARVGKKI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAIKM 247



 Score = 38.9 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 45/121 (37%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  + +F+ G +SG+ G GG  ++VP++    +L        +   + TS+ +   +S+
Sbjct: 137 WLASLLAFIVGGVSGIIGAGGAFLLVPIMLVILKL-------PLRTTIATSIAITFISSI 189

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G + +               + + +   +++  L    +I  +   I M  
Sbjct: 190 GITTGKVITGQVVVIPALIIAIASIFAAPLGARVGKKINQKALQYMLSILIVGTAIKMWI 249

Query: 144 R 144
            
Sbjct: 250 D 250


>gi|307945365|ref|ZP_07660701.1| membrane protein [Roseibium sp. TrichSKD4]
 gi|307771238|gb|EFO30463.1| membrane protein [Roseibium sp. TrichSKD4]
          Length = 105

 Score = 95.1 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 56/99 (56%)

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
             N  M  YG  I++A  TS+G   +I+ P  +  I++GWG + LPP+S G+VN+  VL+
Sbjct: 1   MNNTFMTLYGRPIHQAVTTSSGTGLMISIPGTIGLIWAGWGADFLPPFSAGYVNLLGVLL 60

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           I+P++    P   K ++ + ++ + + F + +   +  F
Sbjct: 61  IIPVTTFAAPYGVKFAHALPRRKMEVFFGVFLLVVAARF 99


>gi|289667290|ref|ZP_06488365.1| hypothetical protein XcampmN_01904 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 279

 Score = 95.1 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 82/240 (34%), Gaps = 10/240 (4%)

Query: 48  MVPVLSKAFQL-MGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           MVPV      L   ID +I   VA+ T+L    P +  +     R G + +  ++     
Sbjct: 33  MVPVFIVLLPLRFRIDIAILPQVAVATALAATIPATASAVTAQYRRGALPIGWVRRLAPA 92

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY-------CERKFPDNYVK 159
                 + +++   +   ++   F+ +    G+ M +   +                   
Sbjct: 93  AGGGAAIGAIVAGRIHGVWVAAIFSAYAAYFGLRMFRGAGIQAPPLADPPIHTLATRVPT 152

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY--GASIYKATATSAGVSALIAFPALLVRIYS 217
            + G + G  S   GVGG   T   +L       +  A A  + V   I+    L  +  
Sbjct: 153 RLIGGLIGLFSATAGVGGASLTVPYVLVQHDRLEMRNAVAVGSAVGLAISLIGALTFVLG 212

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                G     +G V   A + +   + L+ P     ++    + L   F +IM + S V
Sbjct: 213 PVPALGDSRGLVGLVCWTAAIAVAVPATLMAPAGVSAAHRWHTRKLKRAFGLIMLSASLV 272


>gi|289663993|ref|ZP_06485574.1| hypothetical protein XcampvN_13220 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 279

 Score = 95.1 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 82/240 (34%), Gaps = 10/240 (4%)

Query: 48  MVPVLSKAFQL-MGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           MVPV      L   ID +I   VA+ T+L    P +  +     R G + +  ++     
Sbjct: 33  MVPVFIVLLPLRFRIDIAILPQVAVATALAATIPATASAVTAQYRRGALPIGWVRRLAPA 92

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY-------CERKFPDNYVK 159
                 + +++   +   ++   F+ +    G+ M +   +                   
Sbjct: 93  AGAGAAIGAIVAGRIHGVWVAAIFSAYAAYFGLRMFRGAGIQAPPLADPPIHTLATRVPT 152

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY--GASIYKATATSAGVSALIAFPALLVRIYS 217
            + G + G  S   GVGG   T   +L       +  A A  + V   I+    L  +  
Sbjct: 153 RLIGGLIGLFSATAGVGGASLTVPYVLVQHDRLEMRNAVAVGSAVGLAISLIGALTFVLG 212

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                G     +G V   A + +   + L+ P     ++    + L   F +IM + S V
Sbjct: 213 PVPALGDSRGLVGLVCWTAAIAVAVPATLMAPAGVSAAHRWHTRKLKRAFGLIMLSASLV 272


>gi|302524667|ref|ZP_07277009.1| predicted protein [Streptomyces sp. AA4]
 gi|302433562|gb|EFL05378.1| predicted protein [Streptomyces sp. AA4]
          Length = 257

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 56/247 (22%), Positives = 99/247 (40%), Gaps = 15/247 (6%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           V+  I ++++   LSG  + LFG GGG V     +             MHVA+ TS  V+
Sbjct: 4   VLTSILILLLFGCLSGVTTVLFGFGGGFV-----TVPVVAAVTSRGDAMHVAVATSTAVM 58

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              +V + +   R G +    L      + +  V  S+  ++     L   F  +  +  
Sbjct: 59  VVNAVSATVVQARAGRLRRDYLWPLAAFVALGAVAGSVAATYAGDGLLRVLFLAYLAVTI 118

Query: 139 ILMLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +  L R    +   E K    +     G+  G ++  LGVGG + T  L+   G  +  A
Sbjct: 119 VDSLARGGFLKPQGEPKPLSMFTTTAGGVGIGAVASFLGVGGSVMTVPLLRRKGLPMADA 178

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            A +  +S  +A  A  V   +G G +       G+++  A L +L  S+    L  +++
Sbjct: 179 AAMANPLSVPVAVVATAVYATAGGGPS-------GYLDPVAGLTLLAGSLPTIALVRRVA 231

Query: 256 YMIGKKY 262
             +  K 
Sbjct: 232 DRLPDKV 238


>gi|311031819|ref|ZP_07709909.1| hypothetical protein Bm3-1_15022 [Bacillus sp. m3-13]
          Length = 260

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 104/263 (39%), Gaps = 18/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + ++  +    F+   +SG+ G+GG ++  P+L     ++G+   +  H   G S   + 
Sbjct: 5   ILWLVALFAIGFIGSFVSGMVGIGGSIIKYPMLLYIPPMLGLT-VLTAHEVSGVSAVQVF 63

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++     +R+ G +N  ++      + I + +       +    +N  + I  L+  I
Sbjct: 64  FATISGVWAYRKGGYLNKDLIIYMGVSILIGSFIGGYGSRLMSAEGINMVYGILALIAVI 123

Query: 140 LMLKRDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYK 194
           +M    +    +  ++   +  +  I   + G  SG +G  G      +ML         
Sbjct: 124 MMFVPKKGIDDIPLDQVTFNKALAAILAFIVGIGSGIVGAAGAFLLVPIMLVVLKIPTRM 183

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             ATS  ++ + +  + + +I +G             V +   ++++  SI+  P+  KL
Sbjct: 184 TIATSLAITFISSIGSTVGKITTGQ------------VLLVPAIVMVIASIIAAPIGAKL 231

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K L    ++++  T+  
Sbjct: 232 GQKLNTKVLQWILALLILATTIK 254



 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 49/131 (37%), Gaps = 7/131 (5%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  D V     L  + +F+ G  SG+ G  G  ++VP++    +       I   + + T
Sbjct: 135 IPLDQVTFNKALAAILAFIVGIGSGIVGAAGAFLLVPIMLVVLK-------IPTRMTIAT 187

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           SL +   +S+ S +     G + +      +    I   + + +   ++   L    A+ 
Sbjct: 188 SLAITFISSIGSTVGKITTGQVLLVPAIVMVIASIIAAPIGAKLGQKLNTKVLQWILALL 247

Query: 134 CLLMGILMLKR 144
            L   I +   
Sbjct: 248 ILATTIKIWLD 258


>gi|226357189|ref|YP_002786929.1| hypothetical protein Deide_21490 [Deinococcus deserti VCD115]
 gi|226319179|gb|ACO47175.1| conserved hypothetical protein; putative membrane protein
           [Deinococcus deserti VCD115]
          Length = 253

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 76/228 (33%), Gaps = 16/228 (7%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L      +G   +I   VA+  S   +    +     + + G +  +          +
Sbjct: 31  PALEFILPQLGYPITIAQAVAI--SQFSVLAVGLSGAAAYLQQGLVRARTGYLLSPYTIV 88

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
              + S++   +    +   FA+  L     +++  +     + P   V        G +
Sbjct: 89  GGTIGSVLGLVLPARAVATVFAVLLLYSAYSLVRGLKRVEVEREPSRLVPPAM-TFAGVM 147

Query: 170 SGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG LG+GGG     +M    G  I +A ATS  +  L A    L+    G     L    
Sbjct: 148 SGLLGIGGGTVQVPVMNLLGGLPIRQAIATSTFIMGLTAVANALIYQAGGLLDARL---- 203

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                      +    ++       L   I  + L + FS+++  T+ 
Sbjct: 204 --------ACGVALGVLIGARAGAGLQKRIPDRELKLFFSVLLVFTAA 243



 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 50/113 (44%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
            +G +SGL G+GGG V VPV++           + +  A+ TS  ++  T+V + + ++ 
Sbjct: 143 FAGVMSGLLGIGGGTVQVPVMNLL-------GGLPIRQAIATSTFIMGLTAVANALIYQA 195

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G ++ ++       + I     + +   +    L   F++  +     +L +
Sbjct: 196 GGLLDARLACGVALGVLIGARAGAGLQKRIPDRELKLFFSVLLVFTAAQLLYK 248


>gi|291296623|ref|YP_003508021.1| hypothetical protein Mrub_2248 [Meiothermus ruber DSM 1279]
 gi|290471582|gb|ADD29001.1| protein of unknown function DUF81 [Meiothermus ruber DSM 1279]
          Length = 255

 Score = 94.4 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 92/238 (38%), Gaps = 24/238 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +V VP++S   +L         H A+ TSL ++  T ++  + +  HGT++         
Sbjct: 25  IVAVPLMSAFLKL-------SQHKAVATSLVMVVFTGLVGALTYATHGTVDWLAALLIFP 77

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI---- 161
              +T    +   + + +  L + F  + +++ + ++ +  +    +    +++ I    
Sbjct: 78  SAMLTANWGARFANRLPEWKLKRVFGWYLVVVALSLILKPYIPHVEEPLQGWLRIIPLIF 137

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G V GF SG LGVGGG  T  +M+   G   + A  TS       A          G  
Sbjct: 138 TGAVAGFASGLLGVGGGTITVPIMVLLVGLEQHTAQGTSLLAMIPSALVGSYTHYRHGNL 197

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                P             ++   +        ++  + + +L + FS+++  T+  +
Sbjct: 198 AQEYVP------------GLVVGILAGASAGGLIANQLPEFWLRLTFSVVLIWTALRY 243



 Score = 82.8 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 7/118 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  +I    ++G  SGL GVGGG + VP++            +  H A GTSL  + P++
Sbjct: 132 IIPLIFTGAVAGFASGLLGVGGGTITVPIMVLLV-------GLEQHTAQGTSLLAMIPSA 184

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           ++    H RHG +  + +   +  +        L+ + + + +L   F++  +   + 
Sbjct: 185 LVGSYTHYRHGNLAQEYVPGLVVGILAGASAGGLIANQLPEFWLRLTFSVVLIWTALR 242


>gi|254168110|ref|ZP_04874957.1| conserved domain protein, putative [Aciduliprofundum boonei T469]
 gi|197622876|gb|EDY35444.1| conserved domain protein, putative [Aciduliprofundum boonei T469]
          Length = 254

 Score = 94.4 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 88/215 (40%), Gaps = 13/215 (6%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I  + A+ + L +   +S ++   ++    ++ KI++  + VL   + + +    ++   
Sbjct: 46  IPPYFALASPLPMTLISSSIALKRYQSEKLVDWKIVEKMLVVLIPGSFIGAYATKYISGK 105

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
            L    A+F + + I ++        +     +V  + G V G LSG L  GGGI    +
Sbjct: 106 ILMMLTAVFLVYIAIRLIISGS-KERKMEKRMWVILLAGFVIGLLSGLLANGGGILIVPI 164

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           ++  G SI KA  +S  +    A P++            L  W LG ++    L +   +
Sbjct: 165 LVLLGMSIKKAIGSSVAMVLFAAIPSI------------LVHWYLGHIDWLITLGLTIGA 212

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           I    +   ++    KK L   + + +   S  FA
Sbjct: 213 IPGAYIGAWITVNADKKKLRKIYGIFLLLFSIYFA 247


>gi|229084010|ref|ZP_04216306.1| hypothetical protein bcere0022_6580 [Bacillus cereus Rock3-44]
 gi|228699300|gb|EEL51989.1| hypothetical protein bcere0022_6580 [Bacillus cereus Rock3-44]
          Length = 267

 Score = 94.4 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 105/273 (38%), Gaps = 18/273 (6%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           ++          +I +I +  F+   +SG+ G+GG ++  P++     L+G       H 
Sbjct: 1   MLEGRKIKMSFSFIIVIFLIGFVGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTAHE 59

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
             G +   +   +      +R+ G IN  ++      + + + V  L    +++  +N  
Sbjct: 60  VSGITAVQVFFATFAGVWAYRKSGYINKTLVLYMGTSILVGSFVGGLGSKVLEEGQVNIV 119

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPD----NYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
           +A+   +  I+M    R   +           +  +   + G  SG +G GG      +M
Sbjct: 120 YAVLATVAAIMMFVPKRNKSDLSLETLTYHKGLASVLAFIVGASSGIVGAGGAFLLVPIM 179

Query: 186 L-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           L           ATS  ++ + +   ++ ++ +G  +  LP            + I   S
Sbjct: 180 LVILKIPTRITIATSLAITFISSIGVMIGKVTTG-QVVVLPS-----------ITIAIAS 227

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           +L +PL   +   + +  L    ++++ +TS  
Sbjct: 228 LLASPLGASVGKRLNQNVLQWILAILIVSTSIK 260



 Score = 43.5 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 53/129 (41%), Gaps = 7/129 (5%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           LS + +  +  L  V +F+ G  SG+ G GG  ++VP++    +       I   + + T
Sbjct: 141 LSLETLTYHKGLASVLAFIVGASSGIVGAGGAFLLVPIMLVILK-------IPTRITIAT 193

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           SL +   +S+   +     G + +           + + + + +   ++++ L    AI 
Sbjct: 194 SLAITFISSIGVMIGKVTTGQVVVLPSITIAIASLLASPLGASVGKRLNQNVLQWILAIL 253

Query: 134 CLLMGILML 142
            +   I + 
Sbjct: 254 IVSTSIKIW 262


>gi|254367217|ref|ZP_04983247.1| hypothetical protein FTHG_00420 [Francisella tularensis subsp.
           holarctica 257]
 gi|134253037|gb|EBA52131.1| hypothetical protein FTHG_00420 [Francisella tularensis subsp.
           holarctica 257]
          Length = 193

 Score = 94.4 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 5/182 (2%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I    +  F++  +S L G G GL+ VP             +  M +A+ T  G+    
Sbjct: 7   LIIFGAIVGFVASFMSTLLGGGAGLIAVPAFYFIIVHT-YGPNFAMQIALATCCGMSIFL 65

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             ++  +H + G I++  LK ++  L I  ++ S++  +++   L   FAI     GI M
Sbjct: 66  GSIATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKYINTELLKMVFAILLFGSGIWM 125

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +  +      K P +    I+    G LS         F  +  +  G ++ KA A ++ 
Sbjct: 126 ILYNDNKV-IKLPRSARYSIFSFC-GLLSVLAS--STTFATMFFIKIGTNLKKAIAITSV 181

Query: 202 VS 203
            S
Sbjct: 182 CS 183


>gi|56964722|ref|YP_176453.1| transporter [Bacillus clausii KSM-K16]
 gi|56910965|dbj|BAD65492.1| transporter [Bacillus clausii KSM-K16]
          Length = 272

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 52/275 (18%), Positives = 99/275 (36%), Gaps = 32/275 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+++  F +     L G+GGG+++VP L     L    D I    A GTSL V+  T +
Sbjct: 4   VLLVLVGFAAAAFGSLLGLGGGVIVVPALLGLGSLFAAVDVISPQTAAGTSLFVMIFTGI 63

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +  TI+ K    ++  +    ++ +     +        F +F L++   +  
Sbjct: 64  SSVLAYHKQKTIDWKSALLFLIGIVPGAILGTSASKVLSTDSFMVYFGLFMLVIAGSLFL 123

Query: 144 RDRLYCERKFPDNYVK-------------------YIWGMVTGFLSGALGVGGGIFTNLL 184
           R +L  +       ++                    +  +  GFLS   GVGGG     +
Sbjct: 124 RGKLKRKDAPVKGVIRESTDEAGNRYVYGYSPTAAIVVSIGVGFLSSLFGVGGGALMVPV 183

Query: 185 ML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           M+ ++G     A AT+  V    A                   ++ G ++    L ++P 
Sbjct: 184 MIVWFGFPAKIAAATAMLVILFSAVSGSAA------------HFAAGHIHWLYALALIPG 231

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +         L+  I    L     ++    +  F
Sbjct: 232 AWFGGKAGAWLNQRIRSNLLVWLMKLVFIGLAVQF 266



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 46/118 (38%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IV S   G LS LFGVGGG +MVPV+   F            +A  T++ VI  ++V   
Sbjct: 159 IVVSIGVGFLSSLFGVGGGALMVPVMIVWFGF-------PAKIAAATAMLVILFSAVSGS 211

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             H   G I+       I          + +   +  + L     +  + + +  + +
Sbjct: 212 AAHFAAGHIHWLYALALIPGAWFGGKAGAWLNQRIRSNLLVWLMKLVFIGLAVQFILQ 269


>gi|89255772|ref|YP_513134.1| hypothetical protein FTL_0347 [Francisella tularensis subsp.
           holarctica LVS]
 gi|167009703|ref|ZP_02274634.1| hypothetical protein Ftulh_03024 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|89143603|emb|CAJ78787.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. holarctica LVS]
          Length = 192

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 5/195 (2%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I    +  F++  +S L G G GL+ VP             +  M +A+ T  G+    
Sbjct: 2   LIIFGAIVGFVASFMSTLLGGGAGLIAVPAFYFIIVHT-YGPNFAMQIALATCCGMSIFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             ++  +H + G I++  LK ++  L I  ++ S++  +++   L   FAI     GI M
Sbjct: 61  GSIATFKHYKKGNIDLGELKYYLLYLSIGALIGSIIAKYINTELLKMVFAILLFGSGIWM 120

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +  +      K P +    I+    G LS         F  +  +  G ++ KA A ++ 
Sbjct: 121 ILYNDNKV-IKLPRSARYSIFSFC-GLLSVLAS--STTFATMFFIKIGTNLKKAIAITSV 176

Query: 202 VSALIAFPALLVRIY 216
            S  +    +   I+
Sbjct: 177 CSNQLICSYICTYIW 191


>gi|15602461|ref|NP_245533.1| hypothetical protein PM0596 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720866|gb|AAK02680.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 266

 Score = 93.6 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 105/263 (39%), Gaps = 10/263 (3%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I ++IV   L+  +S +FG+GGG++MVP+L   F          + +   TSL ++ 
Sbjct: 3   LQLILILIVCGVLTNFMSAIFGIGGGVLMVPILYTLF------PDFPLQMVAATSLTIVI 56

Query: 80  PTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            +S+++ +   +    IN K +  W   + I   +      ++  + +   F     ++ 
Sbjct: 57  GSSLINLIYFYKQKIQINFKAMLLWSVGMIIGVQLGFEASFYLPDTLIVIVFISVLTILA 116

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWG--MVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKA 195
           I  +   ++    +   +      G  +  G ++G  G+GGG     L+        ++ 
Sbjct: 117 IRTIFHSKIVKTDQAERHENLKGAGLCLFGGGVAGMTGIGGGSIMAPLIGQLNSVKPHQI 176

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
              +  +  +    +L   +      +    W +G+VN   V I++  S + + ++ K+ 
Sbjct: 177 APYTNYMMVIGGLGSLYGYLSKTPPFHLDYGWQIGYVNFSVVTIVVLSSFVTSFISMKIR 236

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
            ++          +I+   +   
Sbjct: 237 GLLHPDVARKMLGLILLAIAAYM 259


>gi|319891377|ref|YP_004148252.1| hypothetical protein SPSINT_0087 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161073|gb|ADV04616.1| hypothetical protein SPSINT_0087 [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 249

 Score = 93.6 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 110/241 (45%), Gaps = 15/241 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
               + +   + G LSG+ G+GG +++ P L     ++G+  S   ++A G +   +  +
Sbjct: 2   LYIFLSLLGIIGGILSGMVGIGGAIIIYPALLIIPPMLGL-PSYNAYIASGLTSAQVFFS 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ S +  R+    ++K++      + I + + + +   + + F+N  + +  +L  +L+
Sbjct: 61  TLSSSIRARQTPDFSLKLILWMGSSMLIGSALGATIAEVLTERFVNSVYVVIAILALVLI 120

Query: 142 LKRDRLYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATS 199
           + + +   E        V  + G+V G +SG +G GG       L++F+   ++   A S
Sbjct: 121 MIKIKPQTEANLKFSKVVLLLTGLVIGAISGVIGAGGAFIIIPVLLVFFKIPMHTVVANS 180

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             ++ + +  A + +++             G++ +G  L ++  S+L  PL  K+   + 
Sbjct: 181 VVIAFISSIGAFMFKLFQ------------GYIPLGDALFLVVGSMLFAPLGLKIGRQMP 228

Query: 260 K 260
           +
Sbjct: 229 E 229


>gi|261820594|ref|YP_003258700.1| hypothetical protein Pecwa_1285 [Pectobacterium wasabiae WPP163]
 gi|261604607|gb|ACX87093.1| protein of unknown function DUF81 [Pectobacterium wasabiae WPP163]
          Length = 286

 Score = 93.6 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 90/216 (41%), Gaps = 15/216 (6%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
            H+A GT+L +I P  ++ F+ +R+   I+ ++          +  + + + S +D + L
Sbjct: 78  QHMAQGTALVMITPNVLIGFLRYRQRNRIDTRVALTMCLFATGSAYLAAHIASSIDVNRL 137

Query: 127 NKAFAIFCLLMGILML----KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            +AFAIF L++    +     + R          +   + G+ +GF+SG   VGGG+   
Sbjct: 138 QRAFAIFLLVLAAYYMWQWYNKKRSQPPEVVLSTHYLPLLGVASGFMSGIFTVGGGLVVV 197

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
             ++        A   + G++ ++  P  L  + S +   G   W++G       L +  
Sbjct: 198 PALVTL---FAFAQTQAQGMALILVVPGALAALLS-YSQAGNVDWNIG-------LPLAL 246

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             I+       +++ +   YL   F +++       
Sbjct: 247 GGIVSVSWGVAVAHKLPVVYLRAAFCLVLVGVGITM 282



 Score = 65.5 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            + +    SG +SG+F VGGGLV+VP L   F       +     A G +L ++ P ++ 
Sbjct: 173 YLPLLGVASGFMSGIFTVGGGLVVVPALVTLF-------AFAQTQAQGMALILVVPGALA 225

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + + + + G ++  I         ++      +   +   +L  AF +  + +GI ML 
Sbjct: 226 ALLSYSQAGNVDWNIGLPLALGGIVSVSWGVAVAHKLPVVYLRAAFCLVLVGVGITMLL 284


>gi|78042783|ref|YP_361264.1| hypothetical protein CHY_2470 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77994898|gb|ABB13797.1| putative membrane protein [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 266

 Score = 93.6 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 96/278 (34%), Gaps = 43/278 (15%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++     G +  L G GGG +++P L    +            A GTSL ++   ++
Sbjct: 4   LLNVIIGIFVGMIGTLIGAGGGFILIPYLILVAKF-------SPQTAAGTSLFMVFFNAL 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + + R   ++ +    +        +  + + S +     N  FA+    + +    
Sbjct: 57  SGSIAYIRQKRVDFRTAFYFALATIPGAIFGAYLNSFLHSRLFNVLFALLLFFLAVRTFF 116

Query: 144 RDRLYCERKFPDN------------------------YVKYIWGMVTGFLSGALGVGGGI 179
                 +++  +                         ++     ++ G LS  LG+GGGI
Sbjct: 117 HKTSNAKKENKETKIPGHETREIIDAEGNKYEYSFNLWLGIGISLIVGILSSLLGIGGGI 176

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
               LM F G  ++ ATATS  +  + +   ++  I            S G V     + 
Sbjct: 177 IHVPLMGFLGFPMHIATATSHFILVITSLIGVISHI------------SYGHVVFAKGIA 224

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               +I+   +  K+S  I    +  G S+ +   +  
Sbjct: 225 YALGAIIGAQIGAKISAKISGNAIKKGLSIALALVAIR 262



 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 8/120 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L I  S + G LS L G+GGG++ VP++              MH+A  TS  ++  TS
Sbjct: 153 LWLGIGISLIVGILSSLLGIGGGIIHVPLMGFL--------GFPMHIATATSHFILVITS 204

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++  + H  +G +       +     I   + + + + +  + + K  +I   L+ I +L
Sbjct: 205 LIGVISHISYGHVVFAKGIAYALGAIIGAQIGAKISAKISGNAIKKGLSIALALVAIRLL 264


>gi|108803101|ref|YP_643038.1| hypothetical protein Rxyl_0249 [Rubrobacter xylanophilus DSM 9941]
 gi|108764344|gb|ABG03226.1| protein of unknown function DUF81 [Rubrobacter xylanophilus DSM
           9941]
          Length = 267

 Score = 93.6 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 99/261 (37%), Gaps = 19/261 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + ++ L      + G LSGL GVGGG+  VP L              +  A+  SL +I 
Sbjct: 14  LSHLVLYAAIGTVGGLLSGLIGVGGGVFFVPALVY-------GAGWNIKEAVAASLVIIV 66

Query: 80  PTSVMS-FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            +++            ++ ++       +   +++   +        +  AFA+  L + 
Sbjct: 67  FSALSGTVRNAGSRDPVDWRVAGLLSLAVAPASLIGVFVSRFSPDEVVKVAFALIILALA 126

Query: 139 ILMLKR-DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKAT 196
               +        R+    ++ +  G++ G LSG +GVGGG+    LM+   G S  +A 
Sbjct: 127 APTARGGSGPLEGRRKIPRWLVFAAGVLIGALSGLVGVGGGVMMVPLMVLGLGLSAKRAV 186

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           +TS  V            I +G+              + ++  ++  S++   L  K+  
Sbjct: 187 STSLAVVMFTGLVGASGYIATGFRDPHE---------LLSLPPLIAGSMVGAWLGVKVRD 237

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            +    + +GF+  M   S  
Sbjct: 238 PLPDGAIRVGFAGFMVLVSLR 258



 Score = 35.8 bits (82), Expect = 7.2,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 10/124 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+  A  L G LSGL GVGGG++MVP++            +    A+ TSL V+  T +
Sbjct: 146 WLVFAAGVLIGALSGLVGVGGGVMMVPLMVLGL-------GLSAKRAVSTSLAVVMFTGL 198

Query: 84  MSFMEHRRHGTINMKILKDWIFVL---PITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +    +   G  +   L     ++    +   +   +   +    +   FA F +L+ + 
Sbjct: 199 VGASGYIATGFRDPHELLSLPPLIAGSMVGAWLGVKVRDPLPDGAIRVGFAGFMVLVSLR 258

Query: 141 MLKR 144
            L  
Sbjct: 259 TLGG 262


>gi|205375197|ref|ZP_03227988.1| hypothetical protein Bcoam_19517 [Bacillus coahuilensis m4-4]
          Length = 273

 Score = 93.2 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 90/251 (35%), Gaps = 32/251 (12%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP L     +      +   +A+GTSL ++  T + S + + + GT++ K    +  
Sbjct: 26  VIIVPALLFFGGMSFFTGEMTPQIAVGTSLVIMIFTGLSSTLSYLKRGTVDYKSGLLFFA 85

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER-------------- 151
                 +V + +   +D       F  F + + I+++ R++L                  
Sbjct: 86  GSGPGGIVGAWINKGLDMDSFTLYFGFFMIFISIILMVRNKLKPFPFAQKGKKRSFQDAD 145

Query: 152 -----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSAL 205
                      +      + G  SG  G+GGG      M L +    + A ATS  +  L
Sbjct: 146 GNTYEYHIQPVIAIASAFIVGLTSGLFGIGGGSLMVPAMILLFLFPPHVAVATSMFMIFL 205

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
            A  + +  I            + G V+    L ++P + L   L   L+  +    L +
Sbjct: 206 SAIVSSVTHI------------AFGNVDWLYALALIPGAWLGAKLGAYLNSRLQSDSLVM 253

Query: 266 GFSMIMFTTSF 276
              +I+     
Sbjct: 254 VLRIILILVGA 264



 Score = 69.7 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            + I ++F+ G  SGLFG+GGG +MVP +   F           HVA+ TS+ +I  +++
Sbjct: 156 VIAIASAFIVGLTSGLFGIGGGSLMVPAMILLFLF-------PPHVAVATSMFMIFLSAI 208

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +S + H   G ++       I    +   + + + S +    L     I  +L+G  ++ 
Sbjct: 209 VSSVTHIAFGNVDWLYALALIPGAWLGAKLGAYLNSRLQSDSLVMVLRIILILVGAQLIY 268

Query: 144 R 144
           +
Sbjct: 269 Q 269


>gi|317125404|ref|YP_004099516.1| hypothetical protein Intca_2280 [Intrasporangium calvum DSM 43043]
 gi|315589492|gb|ADU48789.1| protein of unknown function DUF81 [Intrasporangium calvum DSM
           43043]
          Length = 344

 Score = 93.2 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 84/240 (35%), Gaps = 17/240 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++  P+L                 A+  SL ++  TS+   ++H R G +  +    +  
Sbjct: 29  ILTTPLLVYVLDFQP-------KQAITASLFIVGITSIFGLVQHARQGRVRWRTGLIFGV 81

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW--G 163
              +   +   + +H+  S L  AFA+   +  + M++  R    R      +  I   G
Sbjct: 82  AGMVGAFLGGQLGAHLPGSLLLGAFAVMMGITAVAMIRGRRSPDTRHANGLPLFRILLDG 141

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRI----YSG 218
              G ++G +G GGG      +    G  +  A ATS  V ++ +F            +G
Sbjct: 142 FAVGLVTGLVGAGGGFLVVPALALLGGLPMGAAVATSLLVISMKSFAGFAGYALQFGVNG 201

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             +   P   +   +    L++   +IL     + +   I    L   F   +   +   
Sbjct: 202 HVVQANPETQI---DWAVTLLVTGFAILGALTGSLVVGRIHPDKLRKAFGYFVLVMAIFM 258



 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 63/165 (38%), Gaps = 21/165 (12%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I++  F  G ++GL G GGG ++VP L+           + M  A+ TSL VI+  S   
Sbjct: 137 ILLDGFAVGLVTGLVGAGGGFLVVPALALL-------GGLPMGAAVATSLLVISMKSFAG 189

Query: 86  FMEHRRH-------------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           F  +                  I+  +         +  +  SL++  +    L KAF  
Sbjct: 190 FAGYALQFGVNGHVVQANPETQIDWAVTLLVTGFAILGALTGSLVVGRIHPDKLRKAFGY 249

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
           F L+M I ML ++       +          +V   +   +G+ G
Sbjct: 250 FVLVMAIFMLSQEVGATVLDYAGRGWLDAMTVVIAVV-ALVGIIG 293


>gi|317406945|gb|EFV87000.1| integral membrane protein [Achromobacter xylosoxidans C54]
          Length = 292

 Score = 92.8 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 92/233 (39%), Gaps = 10/233 (4%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSI---- 65
           ++ F  +         + +   LSG  + LFG GGG V+VPVL                 
Sbjct: 27  IVAFCPERTFAMLYVTLALFGALSGVTTVLFGFGGGFVVVPVLYGVLTATHGAQDAIGQA 86

Query: 66  CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
            MH+A+ TS  V+   SV +  +H+R G I    +      + +  ++ +   +      
Sbjct: 87  AMHIAVATSTCVMIVNSVAATRKHQRAGNIVRAYVWPLAGFIGVGALLGAWAATRASGDV 146

Query: 126 LNKAFAIFCLLMGILMLKRDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGVGGGIF 180
           +  AF  +  +  +  L R       +          V    G+V G ++  LGVGG + 
Sbjct: 147 VRYAFIAYLAVTILDCLLRQGFMARHEAQAARPLGQGVTVGGGVVIGVIATFLGVGGSVM 206

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRI-YSGWGLNGLPPWSLGFV 232
           T  L+   G  + KA A +  ++  +A    L  +  +      L PW +G+V
Sbjct: 207 TVPLLRRRGLPMAKAAAMANPLTLPVAIVGTLAYMAAARALPAPLAPWIIGYV 259


>gi|294500093|ref|YP_003563793.1| hypothetical protein BMQ_3337 [Bacillus megaterium QM B1551]
 gi|294350030|gb|ADE70359.1| putative membrane protein [Bacillus megaterium QM B1551]
          Length = 258

 Score = 92.8 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +I  + +  F+   +SG+ G+GG ++  P+L     L+G+  ++  H   G     + 
Sbjct: 3   LTFIITLFLIGFIGSFISGMVGIGGSVINYPMLLYIPPLVGVG-ALTAHQVSGAGAVQVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++     +R+ G +N  ++      + I +++ S    ++ +  LN  +    L+  I
Sbjct: 62  FATIGGVWAYRKSGFLNKSLILYMGSNILIGSMLGSYSSHYMSEQGLNVVYGALALIAVI 121

Query: 140 LMLKRDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYK 194
           +M    +    +       +  +  I  ++ G ++G LG GG      +ML         
Sbjct: 122 MMFIPKKNLDEIEEGELQFNKGLASILSLLIGAVAGVLGAGGAFILVPVMLVVLKIPTRI 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             ATS  V+ + +  + + ++                  I A++++   S++ +P+  K+
Sbjct: 182 TIATSLAVTFISSIGSTVGKLIMHQVP-----------FIPALILVA-ASLIASPIGAKV 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K L    + ++  T+  
Sbjct: 230 GQKMNTKVLQWILAGLILATAVK 252



 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L  + S L G ++G+ G GG  ++VPV+    +       I   + + TSL V   +S+ 
Sbjct: 144 LASILSLLIGAVAGVLGAGGAFILVPVMLVVLK-------IPTRITIATSLAVTFISSIG 196

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           S +       +        +    I + + + +   ++   L    A   L   + + 
Sbjct: 197 STVGKLIMHQVPFIPALILVAASLIASPIGAKVGQKMNTKVLQWILAGLILATAVKIW 254


>gi|147677574|ref|YP_001211789.1| permease [Pelotomaculum thermopropionicum SI]
 gi|146273671|dbj|BAF59420.1| predicted permease [Pelotomaculum thermopropionicum SI]
          Length = 254

 Score = 92.8 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 24/257 (9%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +   ++GT  GL G+GGG++MVP++    +          H A GTSL  +  T +   
Sbjct: 3   FIIGLVAGTFGGLVGLGGGIIMVPLMVALLK-------TGQHKAHGTSLIALVFTGIAGA 55

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             +   G++++            T    +   + + +  L K+F  F +L+ +L+L +  
Sbjct: 56  ATYALRGSVDILAAALLASTAVFTARAGARYANALPEWKLKKSFGAFMILVTVLLLLKPS 115

Query: 147 LYCERKFPDNYVKYIW----GMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAG 201
           L         ++K       G+ TGFLSG +GVGGG      M+   G + + A  +S  
Sbjct: 116 LSQIANPFTGWLKIAALLVTGVFTGFLSGMMGVGGGTIMVPSMVLLTGFTQHTAQGSSLL 175

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
                     L              W LG VN   +  ++   ++ T L + L++ I + 
Sbjct: 176 AMIPAGGAGALT------------HWRLGNVNAAILPGLISGILIGTFLGSNLAHFISEG 223

Query: 262 YLTIGFSMIMFTTSFVF 278
            L + F+ ++  T   +
Sbjct: 224 NLRVIFAAVLVWTGIKY 240



 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 54/130 (41%), Gaps = 7/130 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++V    +G LSG+ GVGGG +MVP +               H A G+SL  + P  
Sbjct: 129 IAALLVTGVFTGFLSGMMGVGGGTIMVPSMVLL-------TGFTQHTAQGSSLLAMIPAG 181

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               + H R G +N  IL   I  + I T + S +   + +  L   FA   +  GI  L
Sbjct: 182 GAGALTHWRLGNVNAAILPGLISGILIGTFLGSNLAHFISEGNLRVIFAAVLVWTGIKYL 241

Query: 143 KRDRLYCERK 152
           K       R 
Sbjct: 242 KTPAPKLLRP 251


>gi|327439830|dbj|BAK16195.1| predicted permease [Solibacillus silvestris StLB046]
          Length = 261

 Score = 92.8 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 100/267 (37%), Gaps = 16/267 (5%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  D    YI +I    F+   LSG+ GVGG ++  P+L     + G+  +   H   G 
Sbjct: 1   MEIDLSFMYIAVIFGLGFIGSFLSGMLGVGGSIIKYPLLLYIPPMFGL-VAFTAHEVSGI 59

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           S   +   S+     +R+ G +N +++      + I + + S     + +  +N  + + 
Sbjct: 60  SAVQVLFASLAGVWAYRKSGLLNRELIIYMGVAILIGSFIGSYGSGFLSEDAVNIVYGLL 119

Query: 134 CLLMGILMLKRDRL--YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGA 190
             +  ++M    +          +  +     ++ G  SG +G  GG     +M      
Sbjct: 120 AAIAAVMMFIPKKTVENTTEITFNKVLASSLALIVGIGSGIVGAAGGFLLVPIMLTVLKI 179

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
                 ATS  ++ + +    + ++ +G                 A ++I+   I   PL
Sbjct: 180 PTRITIATSLAITFISSIGGSVGKVMTGQVD-----------YWPAFIMIIASIIAA-PL 227

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             K+   +  K L    ++++  T+  
Sbjct: 228 GAKVGQKMNVKMLQWLLAIMIGATAIK 254



 Score = 40.8 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 7/115 (6%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           + + G  SG+ G  GG ++VP++    +       I   + + TSL +   +S+   +  
Sbjct: 151 ALIVGIGSGIVGAAGGFLLVPIMLTVLK-------IPTRITIATSLAITFISSIGGSVGK 203

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              G ++       I    I   + + +   ++   L    AI      I +   
Sbjct: 204 VMTGQVDYWPAFIMIIASIIAAPLGAKVGQKMNVKMLQWLLAIMIGATAIKIWID 258


>gi|323465443|gb|ADX77596.1| conserved membrane protein, putative [Staphylococcus
           pseudintermedius ED99]
          Length = 249

 Score = 92.8 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 115/254 (45%), Gaps = 15/254 (5%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
               + +   + G LSG+ G+GG +++ P L     ++G+  S   ++A G +   +  +
Sbjct: 2   LYIFLSLLGIIGGILSGMVGIGGAIIIYPALLIIPPMLGL-PSYNAYIASGLTSAQVFFS 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ S +  R+    ++K++      + I + + + +   + + F+N  + +  +L  +L+
Sbjct: 61  TLSSSIRARQTPDFSLKLILWMGSSMLIGSALGATIAEVLTERFVNSVYVVIAILALVLI 120

Query: 142 LKRDRLYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATS 199
           + + +   E        V  + G+V G +SG +G GG       L++F+   ++   A S
Sbjct: 121 MIKIKPQTEANLKFSKVVLLLTGLVIGAISGVIGAGGAFIIIPVLLVFFKIPMHTVVANS 180

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             ++ + +  A + +++             G++ +G  L ++  S+L  PL  K+   + 
Sbjct: 181 VVIAFISSIGAFMFKLFQ------------GYIPLGDALFLVVGSMLFAPLGLKIGRQMP 228

Query: 260 KKYLTIGFSMIMFT 273
           +    +  ++++  
Sbjct: 229 EYVQKVLVALLIIV 242


>gi|331660876|ref|ZP_08361808.1| conserved hypothetical protein [Escherichia coli TA206]
 gi|315298927|gb|EFU58181.1| conserved hypothetical protein [Escherichia coli MS 16-3]
 gi|331051918|gb|EGI23957.1| conserved hypothetical protein [Escherichia coli TA206]
          Length = 266

 Score = 92.8 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 101/261 (38%), Gaps = 13/261 (4%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  +      +  LS LFGVGG +++VPVL   F          + V   TSL V+  +
Sbjct: 5   MIAALCGCGMATSLLSALFGVGGSILLVPVLHLLF------PQCAVQVLAATSLTVVILS 58

Query: 82  SVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           ++++     R G  +N ++L  W   +             +    L   FA+  + + + 
Sbjct: 59  ALINVCAFWRQGIRLNTRLLVLWSLGMATGMQAGVYASFLLSDKVLLMLFALVLVGLALR 118

Query: 141 MLKRDRLYCERKFPDNYVK---YIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
                +   E   PDN  +    +     G ++G  G+GGG     LM    G       
Sbjct: 119 CGYSRQTTQENVQPDNRTRSTGMLLCTAGGAVAGLTGLGGGSVLAPLMSQLSGIPRQHIA 178

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGL--PPWSLGFVNIGAVLIILPISILITPLATKL 254
                +    +   ++  +Y      G   P    G+VN+  V +I   +++  P++ +L
Sbjct: 179 VYCNWMMVFGSAGTVVSYLYRTAPDTGALPPSMQFGYVNMAIVAVIFFCTLVFQPVSMRL 238

Query: 255 SYMIGKKYLTIGFSMIMFTTS 275
             ++ + +L   FS ++   +
Sbjct: 239 RTLLPECWLQRVFSGVLLMIA 259


>gi|226312420|ref|YP_002772314.1| hypothetical protein BBR47_28330 [Brevibacillus brevis NBRC 100599]
 gi|226095368|dbj|BAH43810.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
           100599]
          Length = 264

 Score = 92.8 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 105/264 (39%), Gaps = 19/264 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D +  + V  F+   +SGL G+GG ++  P+L      +G   +   H   G S   + 
Sbjct: 3   IDLVITLFVIGFVGSFISGLVGIGGSIIKYPMLLYIPPALGF-VAYTAHEVSGISAVQVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ +    R+   I+ +++      + + +++       +  + +N  +AI   +  I
Sbjct: 62  FATLAAVWTLRKDKLIHYQLVVYMGSAIIVGSLLGGYGGKFLSANAVNIVYAILATIAVI 121

Query: 140 LMLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIY 193
           LM    +   ER+             +  +  G  SG +G  G      +ML        
Sbjct: 122 LMFLPKKRVDEREQTTEVIFHKPTAVLSALTVGGASGIVGAAGAFILVPIMLIILKIPTR 181

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A A+S  ++ L +  + +              W  G + +   +I++  SI+  PL TK
Sbjct: 182 VAIASSLAITFLSSIGSTIG------------KWMAGDILLWPSVIMVIASIMAAPLGTK 229

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           +S  +G + L    ++++  T+  
Sbjct: 230 VSKRLGTEILQSILALLILATTIK 253



 Score = 42.4 bits (99), Expect = 0.075,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 48/127 (37%), Gaps = 7/127 (5%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            V+ +    ++++   G  SG+ G  G  ++VP++    +       I   VA+ +SL +
Sbjct: 138 EVIFHKPTAVLSALTVGGASGIVGAAGAFILVPIMLIILK-------IPTRVAIASSLAI 190

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
              +S+ S +     G I +      +    +   + + +   +    L    A+  L  
Sbjct: 191 TFLSSIGSTIGKWMAGDILLWPSVIMVIASIMAAPLGTKVSKRLGTEILQSILALLILAT 250

Query: 138 GILMLKR 144
            I +   
Sbjct: 251 TIKIWAD 257


>gi|326316935|ref|YP_004234607.1| hypothetical protein Acav_2128 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323373771|gb|ADX46040.1| protein of unknown function DUF81 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 274

 Score = 92.4 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 97/264 (36%), Gaps = 10/264 (3%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLM-GIDDSICMHVAMGTSLGVIAPTS 82
            L+I+   ++G LSGL GVGGG +MVPV      L   ++ +    VA+ T+L    P +
Sbjct: 4   TLLIITGMVTGFLSGLLGVGGGFLMVPVFIVLLPLQFPLEMATLPQVAVATALAATVPAT 63

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +     + G + +  +K       +   V ++    V   ++   F+++    G+ ML
Sbjct: 64  ASAVYAQYKRGALPIAWVKRLAPSAAMGAAVGAVAAGLVHGVWVALVFSLYAAYFGLRML 123

Query: 143 KRD-------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY--GASIY 193
           +               +          G + G  S   GVGG   T   +L       + 
Sbjct: 124 RGAGASRAAVDASASPQLIQRISPRAIGGMIGMFSATAGVGGASLTIPYLLAQRDSIEMR 183

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A A  + V   IA                  P  LG V   A + +   +  + P    
Sbjct: 184 NAVAAGSAVGLSIALVGAFAFALGPTPEIAAMPGLLGLVCWTAAIAVAVPAAFLAPWGVS 243

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           +S+ +  + L   F ++M   + +
Sbjct: 244 VSHRLPTQRLKRAFGLVMLLGAVI 267


>gi|300817411|ref|ZP_07097628.1| membrane family protein [Escherichia coli MS 107-1]
 gi|300530037|gb|EFK51099.1| membrane family protein [Escherichia coli MS 107-1]
          Length = 263

 Score = 92.1 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 101/228 (44%), Gaps = 3/228 (1%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I +I +A F +G  + LFG GGG V+VP + +            MH+A+ TS  V+ 
Sbjct: 1   MNDIAIIALAGFTTGITTVLFGFGGGFVVVPFVYQLMLRQSELAGNAMHIAVATSTAVMI 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      + R G ++ + L   ++ + I  VV S +     ++ +   F ++ L+   
Sbjct: 61  FNAGWVSYRNWRAGKLSAQTLFPLLWFIAIGAVVGSCLAGVFSENIVRALFILYMLVTIG 120

Query: 140 LMLKRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             L R   +     +     V    G++ G ++  LGVGG + T  L+  +G ++ +  +
Sbjct: 121 DCLLRKGFFICSSPRRLSLSVVTGGGVIIGMIAALLGVGGSVMTVPLLRRHGYAMGECIS 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
            S  +S  +A    +     GW    +    LGF+++  + +++    
Sbjct: 181 ASNPLSLPVALCGAVTYAVIGWQNIPV-SGFLGFISLKILGLLVLTGW 227


>gi|229108385|ref|ZP_04238002.1| hypothetical protein bcere0018_6710 [Bacillus cereus Rock1-15]
 gi|229143506|ref|ZP_04271932.1| hypothetical protein bcere0012_6740 [Bacillus cereus BDRD-ST24]
 gi|228640008|gb|EEK96412.1| hypothetical protein bcere0012_6740 [Bacillus cereus BDRD-ST24]
 gi|228675012|gb|EEL30239.1| hypothetical protein bcere0018_6710 [Bacillus cereus Rock1-15]
          Length = 235

 Score = 92.1 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 93/241 (38%), Gaps = 14/241 (5%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           + G+GG ++  P++     L+G       H   G +   +   +      +R+   +N  
Sbjct: 1   MVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVFFATFAGAWAYRKSTDMNKM 59

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV 158
           ++      + I + + S   + +D+  +N  + +   +  ++M    +        + ++
Sbjct: 60  LVVYMGASILIGSFIGSFSANLLDEHAVNVVYTVLATIAAMMMFVPKKNNSGAVKYNKWL 119

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYS 217
             +   + G +SG +G GG      +ML      +    ATS  ++ + +      ++ +
Sbjct: 120 ASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKLPLRMTIATSIAITFISSVGITTGKVIT 179

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G             V I A++ I   SI   PL  ++   I +K L    S+++  T+  
Sbjct: 180 GQV-----------VIIPALI-IAVASIFAAPLGARVGKRINQKVLQYMLSILIVGTAIK 227

Query: 278 F 278
            
Sbjct: 228 M 228



 Score = 42.8 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V +F+ G +SG+ G GG  ++VP++    +L        + + + TS+ +   +SV
Sbjct: 118 WLASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKL-------PLRMTIATSIAITFISSV 170

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G + +               + + +   +++  L    +I  +   I M  
Sbjct: 171 GITTGKVITGQVVIIPALIIAVASIFAAPLGARVGKRINQKVLQYMLSILIVGTAIKMWI 230

Query: 144 R 144
            
Sbjct: 231 D 231


>gi|307130257|ref|YP_003882273.1| hypothetical protein Dda3937_00781 [Dickeya dadantii 3937]
 gi|306527786|gb|ADM97716.1| putative membrane protein [Dickeya dadantii 3937]
          Length = 254

 Score = 92.1 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 92/229 (40%), Gaps = 17/229 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G+   +  H+A GT+L +I P  ++ F+ +R+   I+ ++         ++    
Sbjct: 34  AIPVLGMLFGMNQHLAQGTALIMITPNVLIGFLRYRQRNKIDTRMTLMLCAFATVSAYFA 93

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILM----LKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           + + S +    L +AFAIF L++        +   R                G+ +GF+S
Sbjct: 94  AHIASAIQVDNLQQAFAIFLLVLATYYIWQWINSRRSRTPTSVLSKRYLPALGVASGFMS 153

Query: 171 GALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G   VGGG+     L+  +G +  +A   +  +    A  AL+    +            
Sbjct: 154 GIFTVGGGLVVVPALVTLFGFTQTQAQGIALALVVPGALAALVSYTQA------------ 201

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+V+    + +    IL       L++ +    L + F +++   + V 
Sbjct: 202 GYVDWATGIPLAIGGILSVSWGVALAHKLPVVALRLAFCLVLVGVAVVM 250



 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +      SG +SG+F VGGGLV+VP L   F             A G +L ++ P ++ 
Sbjct: 141 YLPALGVASGFMSGIFTVGGGLVVVPALVTLFGF-------TQTQAQGIALALVVPGALA 193

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + + + G ++            ++      +   +    L  AF +  + + ++ML
Sbjct: 194 ALVSYTQAGYVDWATGIPLAIGGILSVSWGVALAHKLPVVALRLAFCLVLVGVAVVML 251


>gi|219851806|ref|YP_002466238.1| protein of unknown function DUF81 [Methanosphaerula palustris
           E1-9c]
 gi|219546065|gb|ACL16515.1| protein of unknown function DUF81 [Methanosphaerula palustris
           E1-9c]
          Length = 267

 Score = 92.1 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 55/280 (19%), Positives = 104/280 (37%), Gaps = 40/280 (14%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +  Y     +A  + G ++ + G+GGG + VP L+  F L           A+GTSL  +
Sbjct: 1   MFGYSIAFFIAGGI-GLIASIIGMGGGFLYVPTLTLLFGLD-------QKTAVGTSLAAM 52

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             +S  + + + R   I + +         I +++ SL+  + D   L   FA+  +LM 
Sbjct: 53  IFSSSTATLIYWRQKKILITLAALLTLPAMIFSMLGSLITVYFDARILVILFALVLILMS 112

Query: 139 ILMLKRD---------------RLYCERKFPDNYV-----KYIWGMVTGFLSGALGVGGG 178
           + ML                       R+             IWG + G +SG  G  GG
Sbjct: 113 LQMLVPSLCFVPAITWGPSIAINPSVSREHSKPIRVPCIHLVIWGAMGGLVSGITGTSGG 172

Query: 179 IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
                 ++  G  I+ A ATS       +       I            +LG +++  V+
Sbjct: 173 ALFVPALVVLGVPIHLAVATSLLTIIPTSITGAATHI------------ALGNISLPYVV 220

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +    ++L       L+  I   ++   F +++ + + + 
Sbjct: 221 VYGAGAVLGAFAGASLAPRIQADHIKRVFGILLISIALLM 260



 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 53/120 (44%), Gaps = 8/120 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++   + G +SG+ G  GG + VP L            + +H+A+ TSL  I PTS+  
Sbjct: 153 LVIWGAMGGLVSGITGTSGGALFVPALVVL--------GVPIHLAVATSLLTIIPTSITG 204

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H   G I++  +  +     +     + +   +    + + F I  + + +LM+++ 
Sbjct: 205 AATHIALGNISLPYVVVYGAGAVLGAFAGASLAPRIQADHIKRVFGILLISIALLMIQQK 264


>gi|16079702|ref|NP_390526.1| integral inner membrane protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221310580|ref|ZP_03592427.1| hypothetical protein Bsubs1_14486 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314904|ref|ZP_03596709.1| hypothetical protein BsubsN3_14407 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319826|ref|ZP_03601120.1| hypothetical protein BsubsJ_14323 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324105|ref|ZP_03605399.1| hypothetical protein BsubsS_14457 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|1731129|sp|P54437|YRKJ_BACSU RecName: Full=UPF0721 transmembrane protein yrkJ
 gi|1303709|dbj|BAA12365.1| YrkJ [Bacillus subtilis]
 gi|2635094|emb|CAB14590.1| putative integral inner membrane protein [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 261

 Score = 92.1 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 113/266 (42%), Gaps = 21/266 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +I  + +  F+   +SG+ G+GG ++  P+L     L+G+  S+  H   G     + 
Sbjct: 3   IAFITTLFIIGFIGAFISGMIGIGGAVINYPMLLYIPSLVGV-MSLTAHEVSGIGAIQVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++     +R+ G IN  ++      + + +V+ S    ++ +  +N  + I  ++  I
Sbjct: 62  FATLGGVWAYRKSGLINKTLIIYMGSSILLGSVLGSYFSHYISEKGINFIYGILAIIAVI 121

Query: 140 LMLKRDRLYCERKFP-------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
           LM    +    ++         + ++      + G +SG LG GG      +ML      
Sbjct: 122 LMFIPKKGQKGQEHSEDKEVIFNKWLASSLAFIIGGVSGILGAGGAFILVPIMLSILNIP 181

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           +    A+S  ++ L +  A + ++ +G             + + A+++++  S++ +P+ 
Sbjct: 182 VRVTVASSLAITFLSSIGATVGKVITGQV-----------LFVPALVLMI-TSLIASPIG 229

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
             +   +  K+L    + ++  T+  
Sbjct: 230 ASVGQKVNTKFLQWVLAQLIGATAIK 255



 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 49/129 (37%), Gaps = 7/129 (5%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
               V+    L    +F+ G +SG+ G GG  ++VP++           +I + V + +S
Sbjct: 137 EDKEVIFNKWLASSLAFIIGGVSGILGAGGAFILVPIMLSIL-------NIPVRVTVASS 189

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           L +   +S+ + +     G +        +    I + + + +   V+  FL    A   
Sbjct: 190 LAITFLSSIGATVGKVITGQVLFVPALVLMITSLIASPIGASVGQKVNTKFLQWVLAQLI 249

Query: 135 LLMGILMLK 143
               I +  
Sbjct: 250 GATAIKIWL 258


>gi|308175949|ref|YP_003915355.1| hypothetical protein AARI_01450 [Arthrobacter arilaitensis Re117]
 gi|307743412|emb|CBT74384.1| conserved hypothetical membrane protein [Arthrobacter arilaitensis
           Re117]
          Length = 288

 Score = 92.1 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 21/231 (9%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++MVP+LS    + G         A+ TSL V+  TS  S + H R G +       +  
Sbjct: 30  ILMVPLLSYVAGMPG-------KEAIATSLLVVGSTSAASLIPHARKGHVRWAQGLVFAT 82

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
              +      L+   +    L   FA+  L     M++  +       P  ++    G+ 
Sbjct: 83  TSMLGAFGGGLLAESIPAQLLMLGFALIMLASARGMIRGRKNPGGASLPV-WLFAPVGLG 141

Query: 166 TGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            G ++G +G GGG      + L  G S+ +A  TS  V  L +  AL  ++ S       
Sbjct: 142 IGAVTGLVGAGGGFLIVPALALLAGLSMAQAVGTSLLVITLNSAAALAGQLNSV------ 195

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                  ++    + +   +IL + L  +LS+ I +  L  GF   +    
Sbjct: 196 ------ALHWPLAMSLAVTAILGSLLGARLSHRIAEHRLRKGFGYFVLAMG 240



 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 12/147 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L        G ++GL G GGG ++VP L+           + M  A+GTSL VI   S
Sbjct: 132 VWLFAPVGLGIGAVTGLVGAGGGFLIVPALALL-------AGLSMAQAVGTSLLVITLNS 184

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +         ++  +         + +++ + +   + +  L K F  F L MG+ +L
Sbjct: 185 AAALAGQLNSVALHWPLAMSLAVTAILGSLLGARLSHRIAEHRLRKGFGYFVLAMGVFVL 244

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFL 169
            ++        P      +  +  G L
Sbjct: 245 SQEVPA-----PGGLAIALIAVFAGLL 266


>gi|330508724|ref|YP_004385152.1| hypothetical protein MCON_2999 [Methanosaeta concilii GP-6]
 gi|328929532|gb|AEB69334.1| protein of unknown function (DUF81) [Methanosaeta concilii GP-6]
          Length = 289

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 53/265 (20%), Positives = 106/265 (40%), Gaps = 28/265 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++V  F++G L GL G GG  +M+P +      MG        +A+GT++  +  T+
Sbjct: 34  VIMLVVVGFIAGVLGGLIGTGGCSIMLPAIHF---WMGYSAP----LAIGTTIFAVIFTA 86

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK--SFLNKAFAIFCLLMGIL 140
           +     H     ++ K +        +  ++ S + + +      L     +  LL  I 
Sbjct: 87  ISGGYGHLVRRNLDRKAVLWIGGAGILGVILGSWLFTMLVDHIDLLQLILGLAFLLPAIR 146

Query: 141 MLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIY 193
           M+       + +   N +        ++G + G L+G +G+GGG      +++ +GA +Y
Sbjct: 147 MIWEGAGRAKPRQEGNEIPGRKSHWAVFGFLIGILTGIVGLGGGYALVPGLIYLFGAPVY 206

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
               +S  V   +A  A  +++Y             GFV +   LI+   +I+   L   
Sbjct: 207 ITMGSSLAVMIPLAAVAGSIKLYQ------------GFVALTTALILGAGTIVGAQLGAA 254

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVF 278
           +        L + F +     S  F
Sbjct: 255 VIKRFKPNTLKLIFGLYFLYVSAKF 279



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 7/116 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V  FL G L+G+ G+GGG  +VP L   F          +++ MG+SL V+ P + ++ 
Sbjct: 172 AVFGFLIGILTGIVGLGGGYALVPGLIYLFGA-------PVYITMGSSLAVMIPLAAVAG 224

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                 G + +           +   + + +I     + L   F ++ L +    +
Sbjct: 225 SIKLYQGFVALTTALILGAGTIVGAQLGAAVIKRFKPNTLKLIFGLYFLYVSAKFI 280


>gi|227112658|ref|ZP_03826314.1| hypothetical protein PcarbP_06839 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 230

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 98/244 (40%), Gaps = 22/244 (9%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           + G+GGGL+ +P+L   F        +  H+A GT+L +I P  ++ F+ +R+   I+ +
Sbjct: 1   MLGIGGGLIAIPILGVLF-------GMDQHMAQGTALVMITPNVLIGFLRYRQRNRIDTR 53

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML----KRDRLYCERKFP 154
           +          +  + + + S +D   L +AFA F L++    +     + R        
Sbjct: 54  VALTMCAFATGSAYLAAHIASSIDVHNLQRAFATFLLVLAAYYMWQWYNKKRSQTSEIVL 113

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
                 + G+ +GF+SG   V       +++         A   + G++ ++  P  L  
Sbjct: 114 STKYLPLLGVASGFMSGIFTV---GGGLVVVPVLVTLFAFAQTQAQGMALILVVPGALAA 170

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           + S +   G   WS+G       L +    I+       +++ +   YL   F +++   
Sbjct: 171 LLS-YSQAGNVDWSIG-------LPLALGGIVSVSWGVAVAHKLPVAYLRAAFCLMLIGV 222

Query: 275 SFVF 278
               
Sbjct: 223 GITM 226



 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 47/118 (39%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            + +    SG +SG+F VG              ++    +     A G +L ++ P ++ 
Sbjct: 117 YLPLLGVASGFMSGIFTVG-------GGLVVVPVLVTLFAFAQTQAQGMALILVVPGALA 169

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + + + G ++  I         ++      +   +  ++L  AF +  + +GI ML
Sbjct: 170 ALLSYSQAGNVDWSIGLPLALGGIVSVSWGVAVAHKLPVAYLRAAFCLMLIGVGITML 227


>gi|297560669|ref|YP_003679643.1| hypothetical protein Ndas_1708 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296845117|gb|ADH67137.1| protein of unknown function DUF81 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 291

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 24/235 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++MVP+L+      G+D       A+  SL V+  TS++  + H R G +  +    +  
Sbjct: 28  ILMVPLLTYV---AGMDP----KEAIAASLFVVGLTSLVGALAHARAGNVRWRTGLVFGA 80

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF----PDNYVKYI 161
                  V  ++ +HV  + L  AFA+  +   + ML+       R      P      +
Sbjct: 81  AGMAGAFVGGVVGAHVPGALLMTAFALMMVATALAMLRGGNATPGRGSDAVAPPLGRVVL 140

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G+V G ++G +G GGG      ++   G ++  A  TS  V  + +F  L   +     
Sbjct: 141 DGVVIGAVTGLVGAGGGFLVVPALVLLGGLAMPAAVGTSLLVIGMKSFAGLTGYL----- 195

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
               P W+L       +  +  +++  + +  +LS  + +  L  GF   +  T 
Sbjct: 196 TAVSPDWAL-------LGAVSALAVAGSLVGVRLSSRVPEAALRKGFGGFVLLTG 243



 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 7/119 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++   + G ++GL G GGG ++VP L            + M  A+GTSL VI   S   
Sbjct: 138 VVLDGVVIGAVTGLVGAGGGFLVVPALVLL-------GGLAMPAAVGTSLLVIGMKSFAG 190

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              +    + +  +L     +    ++V   + S V ++ L K F  F LL G+ +L +
Sbjct: 191 LTGYLTAVSPDWALLGAVSALAVAGSLVGVRLSSRVPEAALRKGFGGFVLLTGVFVLIQ 249


>gi|152974977|ref|YP_001374494.1| hypothetical protein Bcer98_1177 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152023729|gb|ABS21499.1| protein of unknown function DUF81 [Bacillus cytotoxicus NVH 391-98]
          Length = 266

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/275 (18%), Positives = 107/275 (38%), Gaps = 40/275 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T +
Sbjct: 4   IMLLFIGLIAGTIGSLVGLGGGIIVVPLLIGL-------HSLSPQIAVGTSIVTVVFTGL 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ 
Sbjct: 57  SSTLAYVKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLICVSILLML 116

Query: 144 RDRLYC--------------------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
           RD+L                             ++  +   + GF+SG  G+GGG     
Sbjct: 117 RDKLKPLSLSNATVIKRSFTDTEGNTAYYQFPPFLSILIAFIVGFISGLFGIGGGALLVP 176

Query: 184 -LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            +ML +      A ATS  +  L A  +    I            SLG V+    LI++P
Sbjct: 177 AMMLLFAFPAQIAVATSMFIVLLSAIVSSFTHI------------SLGNVSWIYALILIP 224

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + +   +   ++  +    +     + +      
Sbjct: 225 GAWIGGKIGAYINTKLSGNAIINLLRITLIILGAR 259


>gi|268315700|ref|YP_003289419.1| hypothetical protein Rmar_0123 [Rhodothermus marinus DSM 4252]
 gi|262333234|gb|ACY47031.1| protein of unknown function DUF81 [Rhodothermus marinus DSM 4252]
          Length = 276

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 86/236 (36%), Gaps = 10/236 (4%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL   FQ +G+  S+   + +GTSL      S+ S     R   +   +         +
Sbjct: 33  PVLFFYFQAIGVPASVVTPLTLGTSLFCTLLASLSSAWFQYRRQAVVPAVALGAGLFSAL 92

Query: 110 TTVVTSLMIS---HVDKSFLNKAFAIFCLLMGILMLK----RDRLYCERKFPDNYVKYIW 162
              +T+  ++     + +     F +  L + + ML+            +     +    
Sbjct: 93  AITLTTRYVTTQPWYNGTAFRLVFGLVLLSVALRMLRGEAHNPGTTPTFRLRWPVLAGAG 152

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL- 221
            +     + A   GG I   L     G  +++A  TS+    LI+   +L    S     
Sbjct: 153 TVAGAVAAAAGVGGGIILVPLYHRLLGLPMHRAVGTSSATIVLISLVGILSYALSSPAAS 212

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            G+P  +LG V++   L++   + +      + ++ +   +L   F+++    +  
Sbjct: 213 PGMP--TLGHVDVLHGLLLAVPATISARFGVQTAHRLRTVWLRRIFAVLALFIAGR 266



 Score = 40.1 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 39/110 (35%), Gaps = 18/110 (16%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH-----------GT 94
           +++VP+  +          + MH A+GTS   I   S++  + +              G 
Sbjct: 168 IILVPLYHRLL-------GLPMHRAVGTSSATIVLISLVGILSYALSSPAASPGMPTLGH 220

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +++           I+          +   +L + FA+  L +   +L +
Sbjct: 221 VDVLHGLLLAVPATISARFGVQTAHRLRTVWLRRIFAVLALFIAGRLLLQ 270


>gi|229149118|ref|ZP_04277359.1| hypothetical protein bcere0011_6830 [Bacillus cereus m1550]
 gi|228634317|gb|EEK90905.1| hypothetical protein bcere0011_6830 [Bacillus cereus m1550]
          Length = 235

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 93/241 (38%), Gaps = 14/241 (5%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           + G+GG ++  P++     L+G       H   G +   +   +      +R+   +N  
Sbjct: 1   MVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVFFATFAGAWAYRKSTDMNKM 59

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV 158
           ++      + I + + S   + +D+  +N  + +   +  ++M    +        + ++
Sbjct: 60  LVVYMGASILIGSFIGSFSANLLDEHAVNVVYTVLATIAAMMMFVPKKNNSGAVKYNKWL 119

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYS 217
             +   + G +SG +G GG      +ML      +    ATS  ++ + +      ++ +
Sbjct: 120 ASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKLPLRMTIATSIAITFISSVGITTGKVIT 179

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G             V I A++ I   SI   P+  ++   I +K L    S+++  T+  
Sbjct: 180 GQV-----------VIIPALI-IAVASIFAAPVGARVGKRINQKVLQYMLSILIVGTAVK 227

Query: 278 F 278
            
Sbjct: 228 M 228



 Score = 42.4 bits (99), Expect = 0.073,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V +F+ G +SG+ G GG  ++VP++    +L        + + + TS+ +   +SV
Sbjct: 118 WLASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKL-------PLRMTIATSIAITFISSV 170

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G + +               V + +   +++  L    +I  +   + M  
Sbjct: 171 GITTGKVITGQVVIIPALIIAVASIFAAPVGARVGKRINQKVLQYMLSILIVGTAVKMWI 230

Query: 144 R 144
            
Sbjct: 231 D 231


>gi|229126212|ref|ZP_04255230.1| hypothetical protein bcere0015_6720 [Bacillus cereus BDRD-Cer4]
 gi|228657204|gb|EEL13024.1| hypothetical protein bcere0015_6720 [Bacillus cereus BDRD-Cer4]
          Length = 235

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 93/241 (38%), Gaps = 14/241 (5%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           + G+GG ++  P++     L+G       H   G +   +   +      +R+   +N  
Sbjct: 1   MVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVFFATFAGAWAYRKSTDMNKM 59

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV 158
           ++      + I + + S   + +D+  +N  + +   +  ++M    +        + ++
Sbjct: 60  LVVYMGASILIGSFIGSFSANLLDEHAVNVVYTVLATIAAMMMFVPKKNNSGAVKYNKWL 119

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYS 217
             +   + G +SG +G GG      +ML      +    ATS  ++ + +      ++ +
Sbjct: 120 ASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKLPLRMTIATSIAITFISSVGITTGKVIT 179

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G             V I A++ I   SI   PL  ++   I +K L    S+++  T+  
Sbjct: 180 GQV-----------VIIPALI-IAVASIFAAPLGARVGKRINQKVLQYMLSILIVGTAVK 227

Query: 278 F 278
            
Sbjct: 228 M 228



 Score = 42.4 bits (99), Expect = 0.077,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V +F+ G +SG+ G GG  ++VP++    +L        + + + TS+ +   +SV
Sbjct: 118 WLASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKL-------PLRMTIATSIAITFISSV 170

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G + +               + + +   +++  L    +I  +   + M  
Sbjct: 171 GITTGKVITGQVVIIPALIIAVASIFAAPLGARVGKRINQKVLQYMLSILIVGTAVKMWI 230

Query: 144 R 144
            
Sbjct: 231 D 231


>gi|293606383|ref|ZP_06688743.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292815243|gb|EFF74364.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 272

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 100/253 (39%), Gaps = 14/253 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS----ICMHVAMGTSL 75
           +    ++     L G  + LFG GGG V+VPVL                  MH+A+ TS 
Sbjct: 1   MTLYLILAFFGCLCGVTTVLFGFGGGFVVVPVLYGVLTATHGAADPIGASAMHIAVATST 60

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            V+  +++ +  +  R G I    +      + +  +  +L  +H   + +  AF  +  
Sbjct: 61  SVMVVSAIAATRKQLRAGNILRAYVWPLAATIGVGALAGALAATHASGALVRWAFIAYLA 120

Query: 136 LMGILMLKRDRLYC-----ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
           +  +  L R          E       V    G+  G ++  LGVGG + T  L+   G 
Sbjct: 121 VTILDCLLRQGFLARSGDGEASTLRPAVLVGGGVAIGAIATFLGVGGSVMTVPLLRRRGL 180

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNG-LPPWSLGFVNIGAVLIILPISILITP 249
            + KA A +  ++  +A       + +   L   L PW +G+V++ A  ++     L   
Sbjct: 181 PMAKAAAMANPLTIPVAVVGTAAYLAAARDLPALLAPWIIGYVDLYAFAVLA----LGAL 236

Query: 250 LATKLSYMIGKKY 262
           L  +L+  +  + 
Sbjct: 237 LGIRLAAPLIPRI 249


>gi|327399592|ref|YP_004340461.1| hypothetical protein Hipma_1446 [Hippea maritima DSM 10411]
 gi|327182221|gb|AEA34402.1| protein of unknown function DUF81 [Hippea maritima DSM 10411]
          Length = 267

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 55/272 (20%), Positives = 102/272 (37%), Gaps = 40/272 (14%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + SFL+ ++  L G+GGG+VMVP+     +L        +  A+  SL  I  TS +   
Sbjct: 9   IISFLASSVGALLGIGGGVVMVPLFVMFCKL-------TIQQAVAISLFTIIGTSALVSS 61

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
           +  + G +N+K+           ++V  L+   ++   L+  F +F + +  LM  ++R 
Sbjct: 62  KFIKSGALNLKLGISLELFTTGGSIVGGLVALRLNHRLLSALFGLFLIGVAFLMSIKNRK 121

Query: 148 YCER--------------------KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-L 186
             E+                       +    Y      G  SG  G+GGG+    L+  
Sbjct: 122 NMEKLAENGSFSYFDDKLNKNVFYTPKNLTAAYPISFAAGLTSGMFGIGGGVLKVPLLFK 181

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
                I  ATATS+ +  + A  A  +   +G  +  L  +S+              S+ 
Sbjct: 182 ICKLPIKVATATSSFMVGITASAAAYIYYSNGVLIPQLAFFSM------------IGSLF 229

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            + +   +   I  + L   F   +   +   
Sbjct: 230 GSRVGVLIHSKIDSEKLKQVFIYSLIVIAIFM 261



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G  SG+FG+GGG++ VP+L K  +L        + VA  TS  ++  T+  +   + 
Sbjct: 158 FAAGLTSGMFGIGGGVLKVPLLFKICKL-------PIKVATATSSFMVGITASAAAYIYY 210

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +G +  ++    +      + V  L+ S +D   L + F    +++ I M+ +
Sbjct: 211 SNGVLIPQLAFFSMIGSLFGSRVGVLIHSKIDSEKLKQVFIYSLIVIAIFMIFK 264



 Score = 35.8 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 44/121 (36%), Gaps = 13/121 (10%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            I   +   +   LG+GGG+      ++F   +I +A A S       +       I S 
Sbjct: 8   SIISFLASSVGALLGIGGGVVMVPLFVMFCKLTIQQAVAISLFTIIGTSALVSSKFIKS- 66

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                      G +N+   + +   +   + +   ++  +  + L+  F + +   +F+ 
Sbjct: 67  -----------GALNLKLGISLELFTTGGSIVGGLVALRLNHRLLSALFGLFLIGVAFLM 115

Query: 279 A 279
           +
Sbjct: 116 S 116


>gi|253689355|ref|YP_003018545.1| hypothetical protein PC1_2986 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251755933|gb|ACT14009.1| protein of unknown function DUF81 [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 255

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 87/216 (40%), Gaps = 15/216 (6%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
            H+A GT+L +I P  ++ F+ +R+   I+ ++          +    + + S +D   L
Sbjct: 47  QHLAQGTALVMITPNVLIGFLRYRQRNRIDTRMALTMCAFATGSAYFAAHLASSIDVHNL 106

Query: 127 NKAFAIFCLLMGILML----KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            +AFA F L++    +     + R     K        + G+ +GF+SG   VGGG+   
Sbjct: 107 QRAFATFLLVLAAYYMWQWYNKKRSQTPEKVLSTKYLPLLGVASGFMSGIFTVGGGLVVV 166

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
             ++        A   + G++ ++  P  L  + S +   G   WS+G       + +  
Sbjct: 167 PALVTL---FAFAQTQAQGMALILVVPGALAALLS-YSQAGNVDWSIG-------VPLAL 215

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             I+       +++ +   YL   F +++       
Sbjct: 216 GGIVSVSWGVAVAHKLPVVYLRGAFCLVLVGVGVTM 251



 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            + +    SG +SG+F VGGGLV+VP L   F       +     A G +L ++ P ++ 
Sbjct: 142 YLPLLGVASGFMSGIFTVGGGLVVVPALVTLF-------AFAQTQAQGMALILVVPGALA 194

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + + + G ++  I         ++      +   +   +L  AF +  + +G+ ML
Sbjct: 195 ALLSYSQAGNVDWSIGVPLALGGIVSVSWGVAVAHKLPVVYLRGAFCLVLVGVGVTML 252


>gi|254422238|ref|ZP_05035956.1| conserved domain protein, putative [Synechococcus sp. PCC 7335]
 gi|196189727|gb|EDX84691.1| conserved domain protein, putative [Synechococcus sp. PCC 7335]
          Length = 266

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 83/211 (39%), Gaps = 20/211 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +A   SG L+G  G+GGG ++VPVL +             H A  TS   I 
Sbjct: 3   ISSVVLLSIAGLFSGILAGFLGIGGGTLLVPVLLQL--------GFESHAATATSSLAIL 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS     ++ R G ++ K +        I     +L++  V + +    F +  L    
Sbjct: 55  VTSTTGSAQNWRMGYLDPKQILLLGIPAAIAGFFAALLVDGVPQYWQLFGFGLLMLSNLY 114

Query: 140 LMLKRD-----------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL-MLF 187
           L+  +            +            + I G ++GF++G  GVGGG+    L +L 
Sbjct: 115 LVSLKKRVIQKAQSRESKAVAAPAITPGIARTITGTISGFMAGLFGVGGGVILVPLQILL 174

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSG 218
            G  I  A  TS GV  + +    +     G
Sbjct: 175 LGEGIKTAVRTSLGVIVITSIFVCIGHAIQG 205



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +   +SG ++GLFGVGGG+++VP+               +  A+ TSLGVI  TS+   +
Sbjct: 147 ITGTISGFMAGLFGVGGGVILVPLQILLL-------GEGIKTAVRTSLGVIVITSIFVCI 199

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            H   G I +           +   +++  +  +    + + F    +++ I    +
Sbjct: 200 GHAIQGNIRLIEGLLLGLGGLVGVQISTRFLPRLSDRTVTQLFRALLIVLSIYTFWK 256



 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 30/62 (48%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  I G+ +G L+G LG+GGG     ++L  G   + ATATS+    + +          
Sbjct: 8   LLSIAGLFSGILAGFLGIGGGTLLVPVLLQLGFESHAATATSSLAILVTSTTGSAQNWRM 67

Query: 218 GW 219
           G+
Sbjct: 68  GY 69


>gi|56420599|ref|YP_147917.1| hypothetical protein GK2064 [Geobacillus kaustophilus HTA426]
 gi|56380441|dbj|BAD76349.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 260

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 106/266 (39%), Gaps = 18/266 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  + ++ +I +  F+   +SG+ G+GG ++  P+L     L G+  +   H   G S  
Sbjct: 2   DVSLAFLIVIFLIGFVGSFISGMVGIGGSIIKYPMLLYLPPLFGL-AAFSAHEVSGISAV 60

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   ++     +R+ G +N  ++      + + + V       + +  +N  + I   L
Sbjct: 61  QVFFATIGGVWAYRKSGYLNRSLILYMGVSILVGSFVGGYGSKLMSEGTINVVYGILAAL 120

Query: 137 MGILMLKRDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI-FTNLLMLFYGAS 191
             I+M    +    +  ++   +  V      + G  SG +G  G      ++++     
Sbjct: 121 AAIMMFVPKKGIDDIPLDQVTFNKGVAAALAFLIGVGSGIVGAAGAFLLVPVMLVVLKIP 180

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
                ATS  ++ + +  +   +I +G               I A++ ++  S+L +PL 
Sbjct: 181 TRMTIATSLAITFISSIGSTFGKIATGQVD-----------YIPALI-MVVASLLASPLG 228

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
            K    +  K L +  ++++  T+  
Sbjct: 229 AKAGQKMNTKVLQVILAVLILATAVK 254



 Score = 40.8 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 41/111 (36%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++  L+ L GVG G+V          +M +   I   + + TSL +   +S+ S      
Sbjct: 146 VAAALAFLIGVGSGIVGAAGAFLLVPVMLVVLKIPTRMTIATSLAITFISSIGSTFGKIA 205

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            G ++       +    + + + +     ++   L    A+  L   + + 
Sbjct: 206 TGQVDYIPALIMVVASLLASPLGAKAGQKMNTKVLQVILAVLILATAVKIW 256


>gi|261420263|ref|YP_003253945.1| hypothetical protein GYMC61_2888 [Geobacillus sp. Y412MC61]
 gi|319767072|ref|YP_004132573.1| hypothetical protein GYMC52_2018 [Geobacillus sp. Y412MC52]
 gi|261376720|gb|ACX79463.1| protein of unknown function DUF81 [Geobacillus sp. Y412MC61]
 gi|317111938|gb|ADU94430.1| protein of unknown function DUF81 [Geobacillus sp. Y412MC52]
          Length = 260

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 106/266 (39%), Gaps = 18/266 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  + ++ +I +  F+   +SG+ G+GG ++  P+L     L G+  +   H   G S  
Sbjct: 2   DVSLAFLIVIFLIGFVGSFISGMVGIGGSIIKYPMLLYLPPLFGL-AAFSAHEVSGISAV 60

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   ++     +R+ G +N  ++      + + + V       + +  +N  + I   L
Sbjct: 61  QVFFATIGGVWAYRKSGYLNKSLILYMGISILVGSFVGGYGSKLMSEGTINVVYGILAAL 120

Query: 137 MGILMLKRDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI-FTNLLMLFYGAS 191
             I+M    +    +  ++   +  V      + G  SG +G  G      ++++     
Sbjct: 121 AAIMMFVPKKGIDDIPLDQVTFNKGVAAALAFLIGVGSGIVGAAGAFLLVPVMLVVLKIP 180

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
                ATS  ++ + +  +   +I +G               I A++ ++  S+L +PL 
Sbjct: 181 TRMTIATSLAITFISSIGSTFGKIATGQVD-----------YIPALI-MVVASLLASPLG 228

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
            K    +  K L +  ++++  T+  
Sbjct: 229 AKAGQKMNTKVLQVILAVLILATAVK 254



 Score = 40.4 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 41/111 (36%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++  L+ L GVG G+V          +M +   I   + + TSL +   +S+ S      
Sbjct: 146 VAAALAFLIGVGSGIVGAAGAFLLVPVMLVVLKIPTRMTIATSLAITFISSIGSTFGKIA 205

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            G ++       +    + + + +     ++   L    A+  L   + + 
Sbjct: 206 TGQVDYIPALIMVVASLLASPLGAKAGQKMNTKVLQVILAVLILATAVKIW 256


>gi|161505006|ref|YP_001572118.1| hypothetical protein SARI_03136 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160866353|gb|ABX22976.1| hypothetical protein SARI_03136 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 266

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 101/261 (38%), Gaps = 13/261 (4%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  +      +  LS LFGVGG +++VPVL   F          + V   TSL V+  +
Sbjct: 5   MIAALCGCGLATSLLSALFGVGGSILLVPVLHLLF------PQCAVQVLAATSLTVVMLS 58

Query: 82  SVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           ++++     R G  +N ++L  W   +             +    L   FA+  + + + 
Sbjct: 59  ALINVCAFWRQGIRLNSRLLVLWSLGMATGMQAGVYASFLLSDKVLLMLFALVLVGLALR 118

Query: 141 MLKRDRLYCERKFPDNYVK---YIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
                +   E   PDN  +    +     G ++G  G+GGG     LM    G       
Sbjct: 119 CGYSRQTTQENVQPDNRTRSTGMLLCTAGGAVAGLTGLGGGSVLAPLMSQLSGIPRQHIA 178

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGL--PPWSLGFVNIGAVLIILPISILITPLATKL 254
                +    +   ++  +Y      G   P    G+VN+  V +I   +++  P++ +L
Sbjct: 179 VYCNWMMVFGSAGTVVSYLYRTAPDTGALPPSMQFGYVNMAIVAVIFLCTLVFQPVSMRL 238

Query: 255 SYMIGKKYLTIGFSMIMFTTS 275
             ++ + +L   FS ++   +
Sbjct: 239 RTLLPECWLHRVFSGVLLMIA 259


>gi|154685010|ref|YP_001420171.1| YrkJ [Bacillus amyloliquefaciens FZB42]
 gi|154350861|gb|ABS72940.1| YrkJ [Bacillus amyloliquefaciens FZB42]
          Length = 258

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 112/263 (42%), Gaps = 18/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +I  + +  F+   +SG+ G+GG ++  P+L     L+G+  S+  H   G     + 
Sbjct: 3   IAFITTLFIIGFIGAFISGMIGIGGSVINYPMLLYIPSLVGV-MSLTAHEVSGIGAIQVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++     +R+ G +N  ++      + + +V+ S    ++ +  +N  + I  +L  I
Sbjct: 62  FATLGGVWAYRKSGFLNKALIMYMGSSILLGSVLGSYFSHYISEKGINFIYGILAILAVI 121

Query: 140 LMLKRDRLYCERK----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYK 194
           LM    +     +      + ++      + G +SG LG GG      +ML      +  
Sbjct: 122 LMFIPKKGQEHSEDEEVIFNKWLASSLAFIIGGVSGILGAGGAFILVPIMLSILNIPVRI 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             A+S  ++ L +  A + ++ +G  L              A+++++  S++ +P+   +
Sbjct: 182 TVASSLAITFLSSIGATVGKVITGQVLFA-----------PALVLMI-ASLIASPIGASV 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K+L    ++++  T+  
Sbjct: 230 GQKVNTKFLQWILALLISATAIK 252



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 51/129 (39%), Gaps = 7/129 (5%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
             + V+    L    +F+ G +SG+ G GG  ++VP++           +I + + + +S
Sbjct: 134 EDEEVIFNKWLASSLAFIIGGVSGILGAGGAFILVPIMLSIL-------NIPVRITVASS 186

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           L +   +S+ + +     G +        +    I + + + +   V+  FL    A+  
Sbjct: 187 LAITFLSSIGATVGKVITGQVLFAPALVLMIASLIASPIGASVGQKVNTKFLQWILALLI 246

Query: 135 LLMGILMLK 143
               I +  
Sbjct: 247 SATAIKIWL 255


>gi|306824100|ref|ZP_07457472.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
 gi|309801835|ref|ZP_07695953.1| putative membrane protein [Bifidobacterium dentium JCVIHMP022]
 gi|304552636|gb|EFM40551.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
 gi|308221589|gb|EFO77883.1| putative membrane protein [Bifidobacterium dentium JCVIHMP022]
          Length = 304

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 101/253 (39%), Gaps = 24/253 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++++   + G LSG+FG+GGG V+VP L            +    A  TS+  I PTS
Sbjct: 49  MMVLVIVGMIVGLLSGMFGIGGGTVIVPALVWL--------GLSQRHAAATSMLAIVPTS 100

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   + +  +G ++          +       S ++S + +  L   F +F + +    +
Sbjct: 101 ISGVISYAHNGNVDWVAAVLLFVGMFAGGQFGSWLLSRLPELVLRWVFVVFLIFVTANQV 160

Query: 143 KRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATAT 198
                  +R            + G++ G L+G LG+GGG      + + +GAS   A  T
Sbjct: 161 IFTPSRDQRIFMSVATGIGLVLLGVIIGTLAGLLGIGGGALAVPALSILFGASDLIARGT 220

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S       +    +  +                V+I A LII  I+ L TP  T ++  +
Sbjct: 221 SLLAMFPNSITTSVANMKRKL------------VHIKAGLIIGVIAALTTPFGTWVAGAV 268

Query: 259 GKKYLTIGFSMIM 271
             +   I F+  +
Sbjct: 269 SPRAGAIMFAAYL 281



 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 12/137 (8%)

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
              +   +    +       V  I GM+ G LSG  G+GGG      +++ G S   A A
Sbjct: 31  ADRLFGPNPSGLDESPHGMMVLVIVGMIVGLLSGMFGIGGGTVIVPALVWLGLSQRHAAA 90

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS       +   ++   ++            G V+  A +++           + L   
Sbjct: 91  TSMLAIVPTSISGVISYAHN------------GNVDWVAAVLLFVGMFAGGQFGSWLLSR 138

Query: 258 IGKKYLTIGFSMIMFTT 274
           + +  L   F + +   
Sbjct: 139 LPELVLRWVFVVFLIFV 155



 Score = 38.5 bits (89), Expect = 1.00,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 7/95 (7%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP LS  F    +       +A GTSL  + P S+ + + + +   +++K       +  
Sbjct: 203 VPALSILFGASDL-------IARGTSLLAMFPNSITTSVANMKRKLVHIKAGLIIGVIAA 255

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +TT   + +   V        FA +  ++ +    
Sbjct: 256 LTTPFGTWVAGAVSPRAGAIMFAAYLCVLLVRSFF 290


>gi|94312761|ref|YP_585970.1| hypothetical protein Rmet_3831 [Cupriavidus metallidurans CH34]
 gi|93356613|gb|ABF10701.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
          Length = 277

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 89/229 (38%), Gaps = 17/229 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GTSL +IAP  ++ F ++R+   I +K          + T  +
Sbjct: 57  AIPALGLLYGMDQQLAQGTSLVMIAPNVLIGFWQYRKRADIELKTAIVLGLSAVLATYAS 116

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP----DNYVKYIWGMVTGFLS 170
           +   + +D + L + FA+F + + +  L R         P            G+V G  S
Sbjct: 117 AKFATSIDAALLRRIFAVFMIGLALYFLWRLLPGRATTQPQARLSPSWIPAVGVVGGAFS 176

Query: 171 GALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G   VGGG+     ++  +G     A   +  +    A  AL                + 
Sbjct: 177 GFFSVGGGVVAAPALVGLFGMRQAAAQGLALALVTPGAVVALFTYA------------NA 224

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G V+  + + +    +L       L++ + ++ L   F++ +  T+ V 
Sbjct: 225 GHVDWYSGIPLSLGGMLTISWGVALAHRMPERKLRAAFALCLIATAVVM 273



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            I     + G  SG F VGGG+V  P L   F +                L ++ P +V+
Sbjct: 164 WIPAVGVVGGAFSGFFSVGGGVVAAPALVGLFGMRQAAAQGLA-------LALVTPGAVV 216

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +   +   G ++            +T      +   + +  L  AFA+  +   ++ML R
Sbjct: 217 ALFTYANAGHVDWYSGIPLSLGGMLTISWGVALAHRMPERKLRAAFALCLIATAVVMLVR 276


>gi|254370446|ref|ZP_04986451.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|151568689|gb|EDN34343.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
          Length = 237

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 100/243 (41%), Gaps = 8/243 (3%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
           +S L G G GL+ VP             +  M +A+ T  G+      ++  +H + G I
Sbjct: 1   MSTLLGGGAGLIAVPAFYFIIVHT-YGPNFAMQIALATCCGMSIFLGSIATFKHYKKGNI 59

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD 155
           ++  LK ++  L I  ++ S+++ +++   L   FAI     GI M+  +      K P 
Sbjct: 60  DLGELKYYLLYLSIGALIGSIIVKYINTELLKMVFAILLFGSGIWMILYNDNKV-IKLPR 118

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
           +    I+    G LS         F  +  +  G ++ KA A ++    + +  A     
Sbjct: 119 SARYSIFSFC-GLLSVLAS--STTFATMFFIKIGTNLKKAIAITSVCVVINSSVATF--- 172

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
              +G+N   P +   +++  ++     ++  + LA     +I  K L   F  +MF ++
Sbjct: 173 VLTYGININVPLTFSHLSVPLLISSGLFALAGSLLAVNYLGIISPKLLKNLFITLMFVSA 232

Query: 276 FVF 278
            V 
Sbjct: 233 IVM 235


>gi|156936864|ref|YP_001434660.1| hypothetical protein Igni_0069 [Ignicoccus hospitalis KIN4/I]
 gi|156565848|gb|ABU81253.1| protein of unknown function DUF81 [Ignicoccus hospitalis KIN4/I]
          Length = 240

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 106/257 (41%), Gaps = 21/257 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I +  + S L+G ++ LFGVGGG++ +PV+     L   +       A+ T+  +I  +
Sbjct: 1   MIVISFLISVLTGIVASLFGVGGGVLAIPVMVLLLGLSPPE-------AVATNSVIIIVS 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-SFLNKAFAIFCLLMGIL 140
           +++S   H R GT+  + +        + T++ + +  ++ K   +     I  +L+GIL
Sbjct: 54  TLLSAFFHWRQGTLRKEGVW-IGVGGVLGTLLGNALFLYISKVGAMKTVLGISFILIGIL 112

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           M+       + K        + G   G  +  +G+ GG+  N +++  G  I  A   S 
Sbjct: 113 MMLDITKRSQTKSFTAKSLAVIGFFGGTFAALVGMSGGVLLNPILVLLGVDIKYAIGMSV 172

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
               LI   + + ++ +G+    +       V I  +       I+ T +  +L   +  
Sbjct: 173 TALPLITVASAIPKVLAGYAKLDVAA-----VWIPGL-------IIGTKIGARLMKTMKS 220

Query: 261 KYLTIGFSMIMFTTSFV 277
           K L   F + M      
Sbjct: 221 KTLKRAFGIFMILIGIK 237



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 8/118 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + V  F  GT + L G+ GG+++ P+L            + +  A+G S+  +   +V S
Sbjct: 131 LAVIGFFGGTFAALVGMSGGVLLNPILVLL--------GVDIKYAIGMSVTALPLITVAS 182

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +     G   + +   WI  L I T + + ++  +    L +AF IF +L+GI +L 
Sbjct: 183 AIPKVLAGYAKLDVAAVWIPGLIIGTKIGARLMKTMKSKTLKRAFGIFMILIGIKLLL 240


>gi|119952309|ref|YP_950104.1| putative integral membrane protein [Arthrobacter aurescens TC1]
 gi|42558685|gb|AAS20025.1| hypothetical membrane permease protein [Arthrobacter aurescens]
 gi|119951439|gb|ABM10349.1| putative integral membrane protein [Arthrobacter aurescens TC1]
          Length = 300

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 83/234 (35%), Gaps = 26/234 (11%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L                 A+  SL V+  TS +S + H R G +  +    +     
Sbjct: 31  VPILVYV-------AGFEAKEAIAASLFVVGITSAVSVLSHARGGRVVWRTGLIFGAAGM 83

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY------CERKFPDNYVKYIW 162
               V  L+  H+    L  AFA+  +   I ML+  +          +         + 
Sbjct: 84  AGAFVGGLLGGHIPGQILLIAFAVMMVATSIAMLRGRKKKNDNGAAPVKHELPLGRVLLD 143

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
           G V G ++G +G GGG      +    G  +  A  TS  V A+ +F  L   + +    
Sbjct: 144 GAVVGLITGLVGAGGGFLVVPALALLGGLPMSVAVGTSLVVIAMKSFAGLAGYLTTVQ-- 201

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                     ++ G  L +   +I  + + +KL+  I +  L   F + +    
Sbjct: 202 ----------LDWGITLGVTAAAIAGSLIGSKLAGRIPEAALRKAFGLFVLAMG 245



 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 7/143 (4%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++   + G ++GL G GGG ++VP L+           + M VA+GTSL VIA  S   
Sbjct: 140 VLLDGAVVGLITGLVGAGGGFLVVPALALL-------GGLPMSVAVGTSLVVIAMKSFAG 192

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +     ++  I           +++ S +   + ++ L KAF +F L MG  +L + 
Sbjct: 193 LAGYLTTVQLDWGITLGVTAAAIAGSLIGSKLAGRIPEAALRKAFGLFVLAMGTFVLIQQ 252

Query: 146 RLYCERKFPDNYVKYIWGMVTGF 168
                R F    V  +     G 
Sbjct: 253 APADLRWFIAAGVAALTATTAGI 275


>gi|332969416|gb|EGK08440.1| protein of hypothetical function DUF81 [Desmospora sp. 8437]
          Length = 264

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 100/265 (37%), Gaps = 23/265 (8%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D + ++ +  F    LSG+ G+GG ++  P+L     L+G        V+   ++  +  
Sbjct: 4   DLVTVLFLIGFTGSLLSGMLGIGGSIIKYPMLLYIPALIGAASYTAQEVS-ALAMVQVLF 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            ++     +++   I+ +++ D    + I +++       +    +N  + +   +  ++
Sbjct: 63  ATLAGVFAYKKSNLIHRRLVLDMGISIVIGSLLGGYGSKFLPDDLINVIYGLLAAIAAVM 122

Query: 141 MLKRDRLY---------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGA 190
           M   DR                 +  +  I   + G LSG +G GG      +M+     
Sbjct: 123 MFLPDRGKNRGIADTMGTTDIQYNRLIAIISSFIVGLLSGIVGAGGAFILIPIMISILHI 182

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
                 A+S  +  L +    L ++ +G             V  G  ++++  S++  P+
Sbjct: 183 PTRVTIASSLAIVFLSSIGGTLGKVMTGQ------------VLWGPSVLLVIGSLIGAPV 230

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTS 275
              +      + L    ++++  T+
Sbjct: 231 GAIIGKKTNTRILQYALAVLILATA 255



 Score = 53.2 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 49/119 (41%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            + I++SF+ G LSG+ G GG  +++P++            I   V + +SL ++  +S+
Sbjct: 148 LIAIISSFIVGLLSGIVGAGGAFILIPIMISILH-------IPTRVTIASSLAIVFLSSI 200

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              +     G +        +    I   V +++    +   L  A A+  L   + + 
Sbjct: 201 GGTLGKVMTGQVLWGPSVLLVIGSLIGAPVGAIIGKKTNTRILQYALAVLILATAVQVW 259


>gi|242373239|ref|ZP_04818813.1| hypothetical membrane Spanning protein [Staphylococcus epidermidis
           M23864:W1]
 gi|242349053|gb|EES40655.1| hypothetical membrane Spanning protein [Staphylococcus epidermidis
           M23864:W1]
          Length = 251

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 107/241 (44%), Gaps = 14/241 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++++     G +SGL G+GG +++ P +     L G + S   ++A G +   + 
Sbjct: 3   IITVIIMLLIGVFGGFISGLVGIGGAIIIYPAILLLPPLFG-NPSYSAYIASGLTSSQVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +++   ++  +    + +++      + I +++ +L+ +  D +F+N  + I  LL  I
Sbjct: 62  FSTLSGSLKAMKKSEFSPQLVFYMGGGMIIGSMLGALLANLFDTTFVNTVYIIIALLALI 121

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
           LM    +   ++   +  +  I G+  G +SG +G GG       L++ +   +      
Sbjct: 122 LMFINVKSSSDQSSFNKLLLVIVGLSVGIISGIVGAGGAFIIIPILLVLFKLPMNTVVVN 181

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +  A ++++              G++ +   L ++  SI+  PL  KL   +
Sbjct: 182 SIIIAFISSIGAFIIKLIQ------------GYIPLEDALFLIIGSIIFAPLGLKLGKKV 229

Query: 259 G 259
            
Sbjct: 230 P 230


>gi|116748207|ref|YP_844894.1| hypothetical protein Sfum_0761 [Syntrophobacter fumaroxidans MPOB]
 gi|116697271|gb|ABK16459.1| protein of unknown function DUF81 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 260

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 79/218 (36%), Gaps = 18/218 (8%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
            H A GTSL  I    +   + ++ HG+++            IT    +     + +  L
Sbjct: 36  QHEAHGTSLVAIIFAGLAGALTYQLHGSVDWAASVLLAATAMITAQYGARFAGVLPEWKL 95

Query: 127 NKAFAIFCLLMGILMLKRD-----RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
            K+F  F L +  LML +            ++    +    G  TGFLSG +G+GGG   
Sbjct: 96  KKSFGAFLLFVSALMLVKPYLPHFAPDAFSRWSQVLILLSTGTFTGFLSGMMGIGGGTVM 155

Query: 182 NLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
              M L  G S   A  +S                             LG V    +  +
Sbjct: 156 VPAMVLLLGFSQQTAQGSSLLAMVPAGAAGAFT------------HQRLGNVRAALLTGL 203

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +P  ++ T +   ++ M+ +  L + F+ ++  T   +
Sbjct: 204 VPGILVGTYVGGSIANMLPEMQLRLIFAAVIVFTGVRY 241



 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 7/131 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++     +G LSG+ G+GGG VMVP +                 A G+SL  + P  
Sbjct: 130 VLILLSTGTFTGFLSGMMGIGGGTVMVPAMVLLLGF-------SQQTAQGSSLLAMVPAG 182

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                 H+R G +   +L   +  + + T V   + + + +  L   FA   +  G+  L
Sbjct: 183 AAGAFTHQRLGNVRAALLTGLVPGILVGTYVGGSIANMLPEMQLRLIFAAVIVFTGVRYL 242

Query: 143 KRDRLYCERKF 153
           +          
Sbjct: 243 RTPTPPSTESP 253



 Score = 37.4 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 39/122 (31%), Gaps = 17/122 (13%)

Query: 162 WGMVTGFLS-----GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
             ++ G ++          GG I   +++ F  A  ++A  TS            L    
Sbjct: 1   MSLIAGIIAGIFGGLVGLGGGVIMIPIMVDFLKAGQHEAHGTSLVAIIFAGLAGALTYQL 60

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            G             V+  A +++   +++      + + ++ +  L   F   +   S 
Sbjct: 61  HGS------------VDWAASVLLAATAMITAQYGARFAGVLPEWKLKKSFGAFLLFVSA 108

Query: 277 VF 278
           + 
Sbjct: 109 LM 110


>gi|297529768|ref|YP_003671043.1| hypothetical protein GC56T3_1453 [Geobacillus sp. C56-T3]
 gi|297253020|gb|ADI26466.1| protein of unknown function DUF81 [Geobacillus sp. C56-T3]
          Length = 260

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 106/266 (39%), Gaps = 18/266 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  + ++ +I +  F+   +SG+ G+GG ++  P+L     L G+  +   H   G S  
Sbjct: 2   DVSLAFLIVIFLIGFVGSFISGMVGIGGSIIKYPMLLYLPPLFGL-AAFSAHEVSGISAV 60

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   ++     +R+ G +N  ++      + + + V       + +  +N  + I   L
Sbjct: 61  QVFFATIGGVWAYRKSGYLNKSLILYMGISILVGSFVGGYGSKLMSEGTINVVYGILAAL 120

Query: 137 MGILMLKRDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI-FTNLLMLFYGAS 191
             I+M    +    +  ++   +  V      + G  SG +G  G      ++++     
Sbjct: 121 AAIMMFVPKKGIDDIPLDQVTFNKGVAAALAFLIGVGSGIVGAAGAFLLVPVMLVVLKIP 180

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
                ATS  ++ + +  +   +I +G               I A++ ++  S+L +PL 
Sbjct: 181 TRMTIATSLAITFISSIGSTFGKIATGQVD-----------YIPALI-MVVASLLASPLG 228

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
            K    +  K L +  ++++  T+  
Sbjct: 229 AKAGQKMNTKVLQVILAVLILATTVK 254



 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 41/111 (36%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++  L+ L GVG G+V          +M +   I   + + TSL +   +S+ S      
Sbjct: 146 VAAALAFLIGVGSGIVGAAGAFLLVPVMLVVLKIPTRMTIATSLAITFISSIGSTFGKIA 205

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            G ++       +    + + + +     ++   L    A+  L   + + 
Sbjct: 206 TGQVDYIPALIMVVASLLASPLGAKAGQKMNTKVLQVILAVLILATTVKIW 256


>gi|226314422|ref|YP_002774318.1| hypothetical protein BBR47_48370 [Brevibacillus brevis NBRC 100599]
 gi|226097372|dbj|BAH45814.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
           100599]
          Length = 274

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 105/276 (38%), Gaps = 32/276 (11%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              L ++   ++G +  + G+GGG+  VP L   F       S+   VA  TSL VIA T
Sbjct: 5   IAILFVIIGVVAGVIGSIAGLGGGIFFVPALLY-FANWYTPGSMNPQVAAATSLIVIAVT 63

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ S + + +   ++ +    +        +V   + + +     +  F +F L M +++
Sbjct: 64  ALSSSLSYLKQKKVDKQSALLFFIGSAPGAIVGVYLNTLLAVEGFSLLFGLFQLCMFVVL 123

Query: 142 LKRDRLYC-------ERKFPDN-----------YVKYIWGMVTGFLSGALGVGGGIFTNL 183
           + +D++         +R F DN           +         G  S   GVGGGI    
Sbjct: 124 MVKDKIKPRSIKWEVQRHFVDNEGNEYVYGYSKWSVITIAFFVGITSSLFGVGGGILMVP 183

Query: 184 -LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            +M+ +    + ATATS  V  L A    +  I+               V+     ++ P
Sbjct: 184 AMMILFRFPPHIATATSMLVIFLSAVVGSITNIFHD------------NVHWLYAAMLAP 231

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +     L   ++  +  + + +   +++   +   
Sbjct: 232 GAWAGGKLGAIIASKMKGRTIVLFLRVLILGIAIQM 267



 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +I  +F  G  S LFGVGGG++MVP +   F+          H+A  TS+ VI  ++V
Sbjct: 157 WSVITIAFFVGITSSLFGVGGGILMVPAMMILFRF-------PPHIATATSMLVIFLSAV 209

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +  + +  H  ++                + +++ S +    +     +  L + I M+
Sbjct: 210 VGSITNIFHDNVHWLYAAMLAPGAWAGGKLGAIIASKMKGRTIVLFLRVLILGIAIQMI 268


>gi|108758495|ref|YP_633117.1| hypothetical protein MXAN_4961 [Myxococcus xanthus DK 1622]
 gi|108462375|gb|ABF87560.1| putative membrane protein [Myxococcus xanthus DK 1622]
          Length = 260

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 97/260 (37%), Gaps = 26/260 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+I    L+GTL  + G+GGG+V+VP L   F        I +  A+  SL  +  +S
Sbjct: 3   VLLLIAVGALAGTLGAMLGIGGGIVLVPALVLGF-------DIPVEQAIPASLMCVVASS 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   +      ++++         +  +   ++ + V  + +   F +F L + + ML
Sbjct: 56  CSAAAGYVHKHLSDIRLGLSLELATVMGAIAGGMVAAMVAPAMVAVVFGLFTLYVALQML 115

Query: 143 KRDRLYCERK-----FPDNYVKYIWGMVT-GFLSGALGVGGGIFTNLLMLF-YGASIYKA 195
                  E        P NY   I G    G LS  LGVGGG     LM +        A
Sbjct: 116 LLRSPRQEPAAMDDYAPANYPLGISGSFVAGGLSSLLGVGGGPLKVPLMAYGMHVPFKVA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +ATS  +  +    ++      G     L               ++   +    + ++L 
Sbjct: 176 SATSNLMIGVTGAASVAAYALRGHLKLALVSP------------LVVGVLGGAYVGSRLM 223

Query: 256 YMIGKKYLTIGFSMIMFTTS 275
             +    L   F++++   +
Sbjct: 224 PRVPTAVLKRLFAVVLLVVA 243



 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  SF++G LS L GVGGG + VP       LM     +   VA  TS  +I  T   
Sbjct: 137 LGISGSFVAGGLSSLLGVGGGPLKVP-------LMAYGMHVPFKVASATSNLMIGVTGAA 189

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S   +   G + + ++   +  +     V S ++  V  + L + FA+  L++   ML +
Sbjct: 190 SVAAYALRGHLKLALVSPLVVGVLGGAYVGSRLMPRVPTAVLKRLFAVVLLVVAGQMLWK 249


>gi|291615894|ref|YP_003518636.1| Hypothetical Protein PANA_0341 [Pantoea ananatis LMG 20103]
 gi|291150924|gb|ADD75508.1| Hypothetical Protein PANA_0341 [Pantoea ananatis LMG 20103]
          Length = 265

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 81/201 (40%), Gaps = 11/201 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+IV     G    L G GG ++ VP+L    ++         H  +GTS   +A ++
Sbjct: 16  VSLLIVTGIAVGFFLALTGGGGSVMCVPLLLYLVKVPD------THRVIGTSAIAVAVSA 69

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++   H R G +          V     ++ + +   V   +L   F++    + ++ML
Sbjct: 70  LINLFAHSRKGNVRWATGARISLVAVCGALLGAELGKIVSGQYLLLPFSLLMFSVALMML 129

Query: 143 KRDRLYCERKFPDN----YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATA 197
            +         PD      + +   ++ G L+G +G+GGG      +++ +   + +A A
Sbjct: 130 GKQSPLPGASAPDRHFAPAIVWGSVLLLGILAGFMGIGGGFLVVPALVWLFRLPMVEAIA 189

Query: 198 TSAGVSALIAFPALLVRIYSG 218
           TS  V   +          +G
Sbjct: 190 TSLMVVFAMGISTSASYALAG 210



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 9/117 (7%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
            L G L+G  G+GGG ++VP L   F+L        M  A+ TSL V+    + +   + 
Sbjct: 155 LLLGILAGFMGIGGGFLVVPALVWLFRL-------PMVEAIATSLMVVFAMGISTSASYA 207

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHV--DKSFLNKAFAIFCLLMGILMLKRD 145
             G +++ +    I    +  +V   + S +  +   +N  F+   ++M   ML ++
Sbjct: 208 LAGKVSVVMTIYLIAGGLLGGLVGVAVASRLKHNARAINAVFSAMLIVMACYMLLKN 264


>gi|46198738|ref|YP_004405.1| putative permease [Thermus thermophilus HB27]
 gi|46196361|gb|AAS80778.1| putative permease [Thermus thermophilus HB27]
          Length = 245

 Score = 90.1 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 96/239 (40%), Gaps = 24/239 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            VM+P++    +L         H A GTSL  +  T ++  + +   G++++K       
Sbjct: 22  TVMIPLMVGLLKL-------PQHRAHGTSLVTVFFTGLVGALTYGLQGSLDLKAALFLAL 74

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC----ERKFPDNYVKYI 161
              +T    +     + +  L ++F  F + +  L+L R  L      + +   +    +
Sbjct: 75  TAILTARFGARFAHGLSERNLKRSFGWFLIAVSFLLLLRPYLAPLGLVQGELLQDLALLL 134

Query: 162 WGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G  TGFLSG +GVGGG      M L  G   + A  TS       +       +  G  
Sbjct: 135 AGAFTGFLSGMMGVGGGTIMVPAMVLLLGMPQHTAQGTSLLAMVPASLVGAHTHLRLGNV 194

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L             L ++P  ++ T L  +L++++ +  L + F+ ++  T + +A
Sbjct: 195 DRDL------------ALGLVPGVLVGTFLGGELAHVLPEGALRLVFAAVLVWTGWRYA 241



 Score = 76.3 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 7/115 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
            +G LSG+ GVGGG +MVP +            +  H A GTSL  + P S++    H R
Sbjct: 138 FTGFLSGMMGVGGGTIMVPAMVLLL-------GMPQHTAQGTSLLAMVPASLVGAHTHLR 190

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
            G ++  +    +  + + T +   +   + +  L   FA   +  G    +  R
Sbjct: 191 LGNVDRDLALGLVPGVLVGTFLGGELAHVLPEGALRLVFAAVLVWTGWRYARPGR 245



 Score = 42.8 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 38/120 (31%), Gaps = 17/120 (14%)

Query: 162 WGMVTGF-----LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
            G++ GF            GG +   L++       ++A  TS            L    
Sbjct: 1   MGLLIGFLGGVFGGLVGLGGGTVMIPLMVGLLKLPQHRAHGTSLVTVFFTGLVGALTYGL 60

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            G             +++ A L +   +IL      + ++ + ++ L   F   +   SF
Sbjct: 61  QGS------------LDLKAALFLALTAILTARFGARFAHGLSERNLKRSFGWFLIAVSF 108


>gi|226357609|ref|YP_002787349.1| hypothetical protein Deide_1p01520 [Deinococcus deserti VCD115]
 gi|226319600|gb|ACO47595.1| Conserved hypothetical protein, precursor; putative membrane
           protein [Deinococcus deserti VCD115]
          Length = 250

 Score = 90.1 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 74/227 (32%), Gaps = 16/227 (7%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P +      +G   +I   VA+  S   +    +     + + G +  +          +
Sbjct: 30  PAMEFLLPRLGHPLTIGQAVAI--SQFSVLAVGLAGAASYLQQGLVRARTGYLLSPYTIV 87

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
              + S +   +    +   FA+  L     +++  +     + P   V        G +
Sbjct: 88  GGALGSFLGLVLPARAVATVFAMLLLYSAYTLVRGLKRVEVEREPSRLVPPAM-TFAGVM 146

Query: 170 SGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG LG+GGG     +M    G  I +A ATS  +  L A    L+    G     L    
Sbjct: 147 SGLLGIGGGTVQVPVMNLLGGLPIRQAIATSTFIMGLTAVGNALIYQAGGLLNAQL---- 202

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                      I    ++       L   I  + L I F+ ++  T+
Sbjct: 203 --------ACAIAFGVLIGARAGAGLQKRIPDRELKIFFAGLVTLTA 241



 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
            +G +SGL G+GGG V VPV++           + +  A+ TS  ++  T+V + + ++ 
Sbjct: 142 FAGVMSGLLGIGGGTVQVPVMNLL-------GGLPIRQAIATSTFIMGLTAVGNALIYQA 194

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G +N ++     F + I     + +   +    L   FA    L  + +L +
Sbjct: 195 GGLLNAQLACAIAFGVLIGARAGAGLQKRIPDRELKIFFAGLVTLTAVQLLYK 247


>gi|15805571|ref|NP_294267.1| hypothetical protein DR_0544 [Deinococcus radiodurans R1]
 gi|6458232|gb|AAF10119.1|AE001912_4 conserved hypothetical protein [Deinococcus radiodurans R1]
          Length = 255

 Score = 90.1 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 71/227 (31%), Gaps = 16/227 (7%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       G    I +  A+  S   +    +     + + G +  +          I
Sbjct: 33  PALEFVLPRFG--HDITISQAVAVSQIGVLAVGLSGAAAYLQQGLVRARTGYLLSPYTII 90

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
              V S +   +    +   FA+        +L+  +     + P   V        G +
Sbjct: 91  GGAVGSFLGLVLPARAVATVFALLLFYSAYNLLRGLKRVEVEREPSKLVPPAM-TFAGVM 149

Query: 170 SGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG LG+GGG     ++    G  I +A ATS  +  L A    LV    G     L    
Sbjct: 150 SGLLGIGGGTVQVPVLNLMQGMPIRQAIATSTFIMGLTAVGNALVYQAGGLLDVKL---- 205

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                      +    ++       L   I    L + FS+++  T+
Sbjct: 206 --------AAGVALGVLIGAKAGASLQSRIPAAQLKLFFSLLLIFTA 244



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 53/113 (46%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
            +G +SGL G+GGG V VPVL+           + +  A+ TS  ++  T+V + + ++ 
Sbjct: 145 FAGVMSGLLGIGGGTVQVPVLNLM-------QGMPIRQAIATSTFIMGLTAVGNALVYQA 197

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G +++K+       + I     + + S +  + L   F++  +     +L +
Sbjct: 198 GGLLDVKLAAGVALGVLIGAKAGASLQSRIPAAQLKLFFSLLLIFTAGQLLWK 250


>gi|224824049|ref|ZP_03697157.1| protein of unknown function DUF81 [Lutiella nitroferrum 2002]
 gi|224603468|gb|EEG09643.1| protein of unknown function DUF81 [Lutiella nitroferrum 2002]
          Length = 254

 Score = 90.1 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 96/229 (41%), Gaps = 17/229 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G+   +  H+A GT+L +I P  ++ F+ +R+   I+ + +        +++ + 
Sbjct: 34  AIPVLGLLYGMNQHLAQGTTLVMITPNVLIGFLRYRQRNDIDTRAVLTMGLTATVSSYIA 93

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW----GMVTGFLS 170
           +   + ++   L  AFA+F +L+        R     + P   +   +    G+V+G +S
Sbjct: 94  ARFAASLNAHSLQHAFALFLVLLASYFAWLSRSDRHDRRPAVMLPAGFHPLLGVVSGAMS 153

Query: 171 GALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G   VGGG+     L+  +G +  +A   +  +    A  ALL    +            
Sbjct: 154 GIFTVGGGLVVVPALVTLFGFTQTQAQGMALALVVPGALAALLSYTQA------------ 201

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G V+ G  + +    +L       L++ +    L + F  ++  ++ + 
Sbjct: 202 GNVDWGVGIPLAIGGVLSVSWGVALAHKLSAARLRLAFCAVLVGSAVMM 250



 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +   +SG +SG+F VGGGLV+VP L   F             A G +L ++ P ++ + +
Sbjct: 144 LLGVVSGAMSGIFTVGGGLVVVPALVTLFGF-------TQTQAQGMALALVVPGALAALL 196

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            + + G ++  +         ++      +   +  + L  AF    +   ++ML
Sbjct: 197 SYTQAGNVDWGVGIPLAIGGVLSVSWGVALAHKLSAARLRLAFCAVLVGSAVMML 251


>gi|42779948|ref|NP_977195.1| hypothetical protein BCE_0872 [Bacillus cereus ATCC 10987]
 gi|42735866|gb|AAS39803.1| membrane protein, putative [Bacillus cereus ATCC 10987]
          Length = 254

 Score = 90.1 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 102/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTAHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++ K++      + I + + S   + + +  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKKLVMYMGASILIGSFIGSFGANVLKEHTVNVVYAALATMAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R   +    + ++  +   + G  SG +G GG      +ML      I    AT
Sbjct: 120 MMFVPKRNNGDEVKYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRTTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LI+   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVVVPALIVAIASIFAAPLGARVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAIKM 247


>gi|283834923|ref|ZP_06354664.1| conserved hypothetical protein [Citrobacter youngae ATCC 29220]
 gi|291069189|gb|EFE07298.1| conserved hypothetical protein [Citrobacter youngae ATCC 29220]
          Length = 266

 Score = 90.1 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 100/262 (38%), Gaps = 13/262 (4%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  +      +  LS LFGVGG +++VPVL   F          + V   TSL V+  +
Sbjct: 5   MIVALCGCGMATSLLSALFGVGGSILLVPVLHLLF------PQCAVQVLAATSLTVVMLS 58

Query: 82  SVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           ++++     R G  +N ++L  W   +             +    L   FA+  + + + 
Sbjct: 59  ALINVCAFWRQGIRLNSRLLVLWSLGMATGMQAGVYASFLLSDKMLLILFALVLVGLALR 118

Query: 141 MLKRDRLYCERKFPDNYVK---YIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
                +   E   PDN  +    +     G ++G  G+GGG     LM    G       
Sbjct: 119 CGFSHQTTSENVQPDNRTRSAGMLLCTAGGAVAGLTGLGGGSVLAPLMSQLSGIPRQHIA 178

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGL--PPWSLGFVNIGAVLIILPISILITPLATKL 254
                +    +   ++  +Y      G   P    G+VN+  V +I   ++   P++ +L
Sbjct: 179 VYCNWMMLFGSAGTVVSYLYRTAPDTGALPPAMQFGYVNMAIVAVIFLCTLAFQPISMRL 238

Query: 255 SYMIGKKYLTIGFSMIMFTTSF 276
             ++ + +L   FS ++   + 
Sbjct: 239 RTLLPECWLQRVFSGVLLMIAM 260


>gi|228996089|ref|ZP_04155741.1| hypothetical protein bmyco0003_6830 [Bacillus mycoides Rock3-17]
 gi|229003704|ref|ZP_04161516.1| hypothetical protein bmyco0002_6750 [Bacillus mycoides Rock1-4]
 gi|228757541|gb|EEM06774.1| hypothetical protein bmyco0002_6750 [Bacillus mycoides Rock1-4]
 gi|228763656|gb|EEM12551.1| hypothetical protein bmyco0003_6830 [Bacillus mycoides Rock3-17]
          Length = 254

 Score = 90.1 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 105/260 (40%), Gaps = 18/260 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +I +  F+   +SG+ G+GG ++  P++     L+G       H   G +   +   +
Sbjct: 1   MIVIFLIGFVGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTAHEVSGITAIQVFFAT 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                 +R+ G IN  ++      + + + V SL    +D   +N  +AI   +  I+M 
Sbjct: 60  FAGVWVYRKSGYINETLVLYMGTSILVGSFVGSLGSRVLDAGQVNIVYAILATIAAIMMF 119

Query: 143 KRDRLYCERKFP----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
              +   E        +  +  +   + G  SG +G GG      +ML       +   A
Sbjct: 120 IPKKNRSELPLEALTYNKGLASVLAFIVGTSSGIVGAGGAFLLVPIMLVILKIPTHMTIA 179

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS  ++ + +    + ++ +G  +  LP            ++I   S++ +PL   +   
Sbjct: 180 TSLAITFISSIGITIGKVTTG-QVVVLPS-----------IMIAIASLIASPLGASVGKR 227

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           + +K L    ++++ +TS  
Sbjct: 228 LNQKILQWILAILIVSTSIK 247



 Score = 43.9 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L  V +F+ GT SG+ G GG  ++VP++    +       I  H+ + TSL +   +S+ 
Sbjct: 139 LASVLAFIVGTSSGIVGAGGAFLLVPIMLVILK-------IPTHMTIATSLAITFISSIG 191

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +     G + +           I + + + +   +++  L    AI  +   I + 
Sbjct: 192 ITIGKVTTGQVVVLPSIMIAIASLIASPLGASVGKRLNQKILQWILAILIVSTSIKIW 249


>gi|304407220|ref|ZP_07388873.1| protein of unknown function DUF81 [Paenibacillus curdlanolyticus
           YK9]
 gi|304343661|gb|EFM09502.1| protein of unknown function DUF81 [Paenibacillus curdlanolyticus
           YK9]
          Length = 261

 Score = 89.7 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 104/266 (39%), Gaps = 18/266 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  + ++  +     +   +SG+ G+GG ++  P+L      +G        V+   S  
Sbjct: 2   DLSLGWVLTLFAIGLIGSFISGMVGIGGSIIKYPMLLYIPPALGFVAFTAQEVS-AVSAV 60

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   ++     +R+ G IN K++      + I + +       +  S +N  +A+  L+
Sbjct: 61  QVFFATIAGVFAYRKSGLINRKLVLYMGIPIVIGSFIGGYGSKFLPDSAINLTYAVLALI 120

Query: 137 MGILMLKRDRLYCERKF----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
             I+M    +     ++     +  +  +   + G LSG +G  G   T  +ML      
Sbjct: 121 AAIMMFMPKKGAENGEYAELKFNRLIASLTAAIVGILSGVVGAAGAFITVPIMLVVLKIP 180

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
              A A+S  ++ + +  + + +   G  L            +   ++++  SI+ +P+ 
Sbjct: 181 TRVAIASSLAITFIASIGSTVGKAMGGHML------------LIPSIVMVVASIIGSPIG 228

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
            K+   +  K L +  + ++  T   
Sbjct: 229 AKIGQKMNVKVLQLLLAGLITATVIK 254



 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 44/121 (36%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  + + + G LSG+ G  G  + VP++    +       I   VA+ +SL +    S+
Sbjct: 145 LIASLTAAIVGILSGVVGAAGAFITVPIMLVVLK-------IPTRVAIASSLAITFIASI 197

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S +     G + +      +    I + + + +   ++   L    A       I +  
Sbjct: 198 GSTVGKAMGGHMLLIPSIVMVVASIIGSPIGAKIGQKMNVKVLQLLLAGLITATVIKIWL 257

Query: 144 R 144
            
Sbjct: 258 D 258


>gi|228989898|ref|ZP_04149875.1| hypothetical protein bpmyx0001_6650 [Bacillus pseudomycoides DSM
           12442]
 gi|228769833|gb|EEM18419.1| hypothetical protein bpmyx0001_6650 [Bacillus pseudomycoides DSM
           12442]
          Length = 254

 Score = 89.7 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 104/260 (40%), Gaps = 18/260 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +I +  F    +SG+ G+GG ++  P++     L+G      +H   G +   +   +
Sbjct: 1   MIVIFLIGFAGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTVHEVSGITAIQVFFAA 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                 +R+ G IN  ++      + + + V SL    +D   +N  +AI   +  I+M 
Sbjct: 60  FAGVWVYRKSGYINKTLVLYMGTSILVGSFVGSLGSRVLDAGQVNIVYAILATIAAIMMF 119

Query: 143 KRDRLYCERKFP----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
              +   E        +  +  +   + G  SG +G GG      +ML       +   A
Sbjct: 120 IPKKNRSELPLEALTYNKGLASVLAFIVGTSSGIVGAGGAFLLVPIMLVILKIPTHMTIA 179

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS  ++ + +    + ++            + G V +   ++I   S++ +PL   +   
Sbjct: 180 TSLAITFISSIGITIGKV------------TTGQVVVLPSIMIAIASLIASPLGASVGKR 227

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           + +K L    ++++ +TS  
Sbjct: 228 LNQKILQWILAILIVSTSIK 247



 Score = 43.9 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L  V +F+ GT SG+ G GG  ++VP++    +       I  H+ + TSL +   +S+ 
Sbjct: 139 LASVLAFIVGTSSGIVGAGGAFLLVPIMLVILK-------IPTHMTIATSLAITFISSIG 191

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +     G + +           I + + + +   +++  L    AI  +   I + 
Sbjct: 192 ITIGKVTTGQVVVLPSIMIAIASLIASPLGASVGKRLNQKILQWILAILIVSTSIKIW 249


>gi|16802663|ref|NP_464148.1| hypothetical protein lmo0621 [Listeria monocytogenes EGD-e]
 gi|47096284|ref|ZP_00233881.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
 gi|224498700|ref|ZP_03667049.1| hypothetical protein LmonF1_02961 [Listeria monocytogenes Finland
           1988]
 gi|224502079|ref|ZP_03670386.1| hypothetical protein LmonFR_06102 [Listeria monocytogenes FSL
           R2-561]
 gi|254828312|ref|ZP_05232999.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|254900146|ref|ZP_05260070.1| hypothetical protein LmonJ_10045 [Listeria monocytogenes J0161]
 gi|254911300|ref|ZP_05261312.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254935627|ref|ZP_05267324.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|255026854|ref|ZP_05298840.1| hypothetical protein LmonocytFSL_11936 [Listeria monocytogenes FSL
           J2-003]
 gi|16410010|emb|CAC98699.1| lmo0621 [Listeria monocytogenes EGD-e]
 gi|47015329|gb|EAL06265.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
 gi|258600705|gb|EEW14030.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258608208|gb|EEW20816.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|293589231|gb|EFF97565.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 246

 Score = 89.7 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 121/255 (47%), Gaps = 24/255 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I    + +  +  +    G+GGG++++P+L     LMG+        +  T   +   T 
Sbjct: 3   IITYFLIALSTSVVGSFLGIGGGVILLPILL----LMGVSQGTAAFSSALTVFTMAIFT- 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA-IFCLLMGILM 141
             S    R+ G + + +          TT + +++   + ++     +  +  +L+GI++
Sbjct: 58  -CSIYYKRKQGNVGLAL--KIAVTSIPTTFIGAMVNQMLPEAVYRFLYGALIVVLLGIMI 114

Query: 142 LKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATAT 198
            K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +   A+AT
Sbjct: 115 WKKKRNNEKPHFLSKYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQKTASAT 174

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+ V+ L +  ++      G        +S+G       + ++P +I+   + T+L+ ++
Sbjct: 175 SSYVTLLTSLASIGSYAIIGGS-----DFSIG-------IYMIPGAIIGALIGTRLNKLL 222

Query: 259 GKKYLTIGFSMIMFT 273
            +K++ I F++++  
Sbjct: 223 DEKWIAILFNVLLIA 237



 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V   + G L+GLFG+GGG +++P+L   F L           A  TS  V   TS+ S  
Sbjct: 136 VFGVIIGFLAGLFGIGGGPIVIPILLLIFMLN-------QKTASATSSYVTLLTSLASIG 188

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +   G  +  I    I    I  ++ + +   +D+ ++   F +  + +  L L +
Sbjct: 189 SYAIIGGSDFSIGIYMIPGAIIGALIGTRLNKLLDEKWIAILFNVLLIALFALNLIK 245


>gi|311032416|ref|ZP_07710506.1| hypothetical protein Bm3-1_18063 [Bacillus sp. m3-13]
          Length = 289

 Score = 89.7 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 92/266 (34%), Gaps = 32/266 (12%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L I+  F    LSG FG+GGGLV+ PVL                 A+ TSL     TS
Sbjct: 3   FLLFILLGFSISMLSGFFGIGGGLVLTPVLLLI--------GYTPIEAISTSLLYTIGTS 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-----DKSFLNKAFAIFCLLM 137
           +     H +   I  K          + T +   ++S +     D + +   +       
Sbjct: 55  MAGVYAHFKMKNIQWKAAVIIGASGVVATQIAYPVVSWLESNGYDTTVVPILYLALLTYF 114

Query: 138 GILMLKRDR------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGA 190
              MLK+D+                +     G + GFLS  LGVGGG     L++ +YG 
Sbjct: 115 AYKMLKKDKGDNRVDYDATSNKQSFWKFIFIGFIAGFLSTTLGVGGGFIIVPLLIAYYGF 174

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           S  +A ATS     LI     +    +              +N    L ++  +I  + L
Sbjct: 175 SSKQAVATSLAGVILIVSAGFITYAVNNP------------INFKVGLFLIAGAIFGSQL 222

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSF 276
             K +     + +      +   T  
Sbjct: 223 GAKATSFFKSRSIQKLLGFLYIVTML 248



 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 7/118 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I   F++G LS   GVGGG ++VP+L   +             A+ TSL  +       
Sbjct: 142 FIFIGFIAGFLSTTLGVGGGFIIVPLLIAYYGFSS-------KQAVATSLAGVILIVSAG 194

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           F+ +  +  IN K+    I      + + +   S      + K      ++  + ++ 
Sbjct: 195 FITYAVNNPINFKVGLFLIAGAIFGSQLGAKATSFFKSRSIQKLLGFLYIVTMLSLIL 252


>gi|327396155|dbj|BAK13577.1| predicted permeasa hypothetical protein [Pantoea ananatis AJ13355]
          Length = 265

 Score = 89.7 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 81/201 (40%), Gaps = 11/201 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+IV     G    L G GG ++ VP+L    ++         H  +GTS   +A ++
Sbjct: 16  VSLLIVTGIAVGFFLALTGGGGSVMCVPLLLYLVKVPD------THRVIGTSAIAVAVSA 69

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++   H   G +          V     ++ + +   V   +L   F++    + ++ML
Sbjct: 70  LINLFAHSHKGNVRWATGARISLVAVCGALLGAELGKIVSGQYLLLPFSLLMFSVALMML 129

Query: 143 KRDRLYCERKFPDN----YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATA 197
           ++         PD      + +   ++ G L+G +G+GGG      +++ +   + +A A
Sbjct: 130 RKQSPLPGASAPDRHFAPAIVWGSVLLLGILAGFMGIGGGFLVVPALVWLFRFPMVEAIA 189

Query: 198 TSAGVSALIAFPALLVRIYSG 218
           TS  V   +          +G
Sbjct: 190 TSLMVVFAMGISTSASYALAG 210



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 9/117 (7%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
            L G L+G  G+GGG ++VP L   F+         M  A+ TSL V+    + +   + 
Sbjct: 155 LLLGILAGFMGIGGGFLVVPALVWLFRF-------PMVEAIATSLMVVFAMGISTSASYA 207

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHV--DKSFLNKAFAIFCLLMGILMLKRD 145
             G +++ +    I    +  +V   + S +  +   +N  F+   ++M   ML ++
Sbjct: 208 LAGKVSVVMTIYLIAGGLLGGLVGVAVASRLKHNARAINAVFSAMLIVMASYMLLKN 264


>gi|212638136|ref|YP_002314656.1| putative permease [Anoxybacillus flavithermus WK1]
 gi|212559616|gb|ACJ32671.1| Predicted permease [Anoxybacillus flavithermus WK1]
          Length = 263

 Score = 89.7 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 104/267 (38%), Gaps = 19/267 (7%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  V Y+ ++ +   +   LSG+ G+GG ++  P+L     L+G        V+   S  
Sbjct: 3   EYTVSYLLVLFLIGAIGSILSGMVGIGGSVIKYPMLLYIPPLLGFVAFTAQEVS-AISAV 61

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +  +++ + +  ++ G ++ +++      + I + +       +    +N  +AI   +
Sbjct: 62  QVFFSTLAALVVFKKGGYVSFRLVGYMGTAIVIGSFIGGYGSKFLADETINFVYAILASI 121

Query: 137 MGILMLKRD-----RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGA 190
             ILM          +  E+   + +   +   + G  SG +G  G      +ML     
Sbjct: 122 AAILMFFPKPKGSEEVSAEQLTFNRFYAVVLSFIVGVASGIVGAAGAFVIVPIMLVILKV 181

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
               A  +S  ++ + +  A + ++  G  L            +   L+++  S+L  P+
Sbjct: 182 PTRIAIGSSVAITFISSIGATIGKVMGGHML------------LVPSLVMVIASLLAAPV 229

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             KLS  I  K L     +++  T   
Sbjct: 230 GAKLSQKINTKVLEYILLVLIVATVIK 256



 Score = 40.8 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 7/119 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
             +V SF+ G  SG+ G  G  V+VP++    +       +   +A+G+S+ +   +S+ 
Sbjct: 148 YAVVLSFIVGVASGIVGAAGAFVIVPIMLVILK-------VPTRIAIGSSVAITFISSIG 200

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + +     G + +      +    +   V + +   ++   L     +  +   I +  
Sbjct: 201 ATIGKVMGGHMLLVPSLVMVIASLLAAPVGAKLSQKINTKVLEYILLVLIVATVIKIWY 259


>gi|320334891|ref|YP_004171602.1| hypothetical protein Deima_2299 [Deinococcus maricopensis DSM
           21211]
 gi|319756180|gb|ADV67937.1| protein of unknown function DUF81 [Deinococcus maricopensis DSM
           21211]
          Length = 251

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 74/227 (32%), Gaps = 16/227 (7%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       G D +I   VA+  S   +    +     + R G +  +          +
Sbjct: 29  PALEFVLPRFGHDLNIAQAVAI--SQVGVLAVGLSGAASYLRQGLVRARTGYLLSPYTIL 86

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
              + S +   +    +   FA   L     +L+  +     + P   V        G +
Sbjct: 87  GGALGSYLGLILPARAVATVFAALLLYSAFTLLRGLKRVEVERPPSRLVPPAM-TFAGIM 145

Query: 170 SGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG LG+GGG     +M    G  I +A ATS  +  L A    L+    G     L    
Sbjct: 146 SGLLGIGGGTVQVPVMNLLAGVPIRQAIATSTFIMGLTAVANALIYQAGGLLDARL---- 201

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                      +    ++       L   I  + L I FS+++  T+
Sbjct: 202 --------ACAVALGVLIGARAGAGLQSRIPDRALKIFFSVLIVFTA 240



 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 52/113 (46%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
            +G +SGL G+GGG V VPV++           + +  A+ TS  ++  T+V + + ++ 
Sbjct: 141 FAGIMSGLLGIGGGTVQVPVMNLL-------AGVPIRQAIATSTFIMGLTAVANALIYQA 193

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G ++ ++       + I     + + S +    L   F++  +   + +L +
Sbjct: 194 GGLLDARLACAVALGVLIGARAGAGLQSRIPDRALKIFFSVLIVFTAVQLLVK 246


>gi|226309640|ref|YP_002769534.1| hypothetical protein BBR47_00530 [Brevibacillus brevis NBRC 100599]
 gi|226092588|dbj|BAH41030.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
           100599]
          Length = 262

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 107/264 (40%), Gaps = 22/264 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L++   F+    SGL G+GG ++  P+L      +G+       V++  S+  +   S
Sbjct: 6   LLLMVSIGFVGSFFSGLLGIGGAIISYPMLLFIPPALGVAQFSAQEVSV-ISMFQVFFAS 64

Query: 83  VMSFMEHRRHGT-----INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +   +  R+        I+  +++D    +   +++ + +  ++    +N  + I  ++ 
Sbjct: 65  LSGVLAFRKRNGKNSPLIHKGLVRDMGVSILAGSLIGAALSRYLANESINLVYGILAIIA 124

Query: 138 GILMLKRDRLYCERKFPDNYVKYI---WGMVTGFLSGALGVGGGIFTNLLM-LFYGASIY 193
            ILML ++R          Y ++I      V G +SG +G GG      +M         
Sbjct: 125 VILMLVKNRGTEAAAGEVAYNRFIAAGAAFVVGIVSGIVGAGGAFILIPIMLTVLKIPTR 184

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
              A+S  +  + A   ++ ++  G             + +  VL  +  S+L  P+ + 
Sbjct: 185 VTIASSLAIVFISAIGGVIGKLSGGQ------------IPLLPVLYTVIGSVLGAPVGSM 232

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           +S     KYL  G  +++  T+  
Sbjct: 233 VSAKSDVKYLRYGLIVLICATAIK 256



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A+F+ G +SG+ G GG  +++P++    +       I   V + +SL ++  +++   + 
Sbjct: 152 AAFVVGIVSGIVGAGGAFILIPIMLTVLK-------IPTRVTIASSLAIVFISAIGGVIG 204

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               G I +  +   +    +   V S++ +  D  +L     +      I + 
Sbjct: 205 KLSGGQIPLLPVLYTVIGSVLGAPVGSMVSAKSDVKYLRYGLIVLICATAIKIW 258


>gi|254830393|ref|ZP_05235048.1| hypothetical protein Lmon1_03492 [Listeria monocytogenes 10403S]
          Length = 246

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 121/255 (47%), Gaps = 24/255 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I    + +  +  +    G+GGG++++P+L     LMG+        +  T   +   T 
Sbjct: 3   IITYFLIALSTSVVGSFLGIGGGVILLPILL----LMGVSQGTAAFSSALTVFTMAIFT- 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA-IFCLLMGILM 141
             S    R+ G + + +          TT + +++   + ++     +  +  +L+GI++
Sbjct: 58  -CSIYYKRKQGNVGLAL--KIAVTSIPTTFIGAMVNQMLPEAVYRFLYGALIVVLLGIMI 114

Query: 142 LKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATAT 198
            K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +   A+AT
Sbjct: 115 WKKKRNNEKPHFLSEYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQKTASAT 174

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+ V+ L +  ++      G        +S+G       + ++P +I+   + T+L+ ++
Sbjct: 175 SSYVTLLTSLASIGSYAIIGGS-----DFSIG-------IYMIPGAIIGALIGTRLNKLL 222

Query: 259 GKKYLTIGFSMIMFT 273
            +K++ I F++++  
Sbjct: 223 DEKWIAILFNVLLIA 237



 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
              + +Y  +  V   + G L+GLFG+GGG +++P+L   F L           A  TS 
Sbjct: 124 PHFLSEYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLN-------QKTASATSS 176

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            V   TS+ S   +   G  +  I    I    I  ++ + +   +D+ ++   F +  +
Sbjct: 177 YVTLLTSLASIGSYAIIGGSDFSIGIYMIPGAIIGALIGTRLNKLLDEKWIAILFNVLLI 236

Query: 136 LMGILMLKR 144
            +  L L +
Sbjct: 237 ALFALNLIK 245


>gi|330813862|ref|YP_004358101.1| protein of unknown function DUF81 [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486957|gb|AEA81362.1| protein of unknown function DUF81 [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 123

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 1/115 (0%)

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           M  GF +  LG+GGG      M  +G  I  A  TSA +  LI+        +SG+  + 
Sbjct: 1   MGLGFFAVPLGIGGGSLGVPAMRLFGYPIKIAIGTSAAIGFLISIFGASSMSFSGYFFDV 60

Query: 224 L-PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           +  P SLG+VN+   L+ +P+++ + P+  +L++ I K  L+  F + +   +  
Sbjct: 61  VNTPLSLGYVNLPGFLVFVPVTMFMAPIGARLAHRIEKTLLSKVFGVFLLIIAIR 115



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 45/123 (36%), Gaps = 21/123 (17%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR--- 90
           G  +   G+GGG + VP +              + +A+GTS  +    S+          
Sbjct: 4   GFFAVPLGIGGGSLGVPAMRLF--------GYPIKIAIGTSAAIGFLISIFGASSMSFSG 55

Query: 91  ----------RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                       G +N+     ++ V      + + +   ++K+ L+K F +F L++ I 
Sbjct: 56  YFFDVVNTPLSLGYVNLPGFLVFVPVTMFMAPIGARLAHRIEKTLLSKVFGVFLLIIAIR 115

Query: 141 MLK 143
              
Sbjct: 116 SFY 118


>gi|284800901|ref|YP_003412766.1| hypothetical protein LM5578_0649 [Listeria monocytogenes 08-5578]
 gi|284994087|ref|YP_003415855.1| hypothetical protein LM5923_0648 [Listeria monocytogenes 08-5923]
 gi|284056463|gb|ADB67404.1| hypothetical protein LM5578_0649 [Listeria monocytogenes 08-5578]
 gi|284059554|gb|ADB70493.1| hypothetical protein LM5923_0648 [Listeria monocytogenes 08-5923]
          Length = 246

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 124/258 (48%), Gaps = 25/258 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D I   ++A   +  +    G+GGG++++P+L     LMG+        +  T   +  
Sbjct: 1   MDMITYFLIA-LSTSVVGSFLGIGGGVILLPILL----LMGVSQGTAAFSSALTVFTMAI 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA-IFCLLMG 138
            T   S    R+ G + + +          TT + +++   + ++     +  +  +L+G
Sbjct: 56  FT--CSIYYKRKQGNVGLAL--KIAVTSIPTTFIGAMVNQMLPEAVYRFLYGALIVVLLG 111

Query: 139 ILMLKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKA 195
           I++ K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +   A
Sbjct: 112 IMIWKKKRNNEKPHFLSKYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQKTA 171

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +ATS+ V+ L +  ++      G        +S+G       + ++P +I+   + T+L+
Sbjct: 172 SATSSYVTLLTSLASIGSYAIIGGS-----DFSIG-------IYMIPGAIIGALIGTRLN 219

Query: 256 YMIGKKYLTIGFSMIMFT 273
            ++ +K++ I F++++  
Sbjct: 220 KLLDEKWIAILFNVLLIA 237



 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V   + G L+GLFG+GGG +++P+L   F L           A  TS  V   TS+ S  
Sbjct: 136 VFGVIIGFLAGLFGIGGGPIVIPILLLIFMLN-------QKTASATSSYVTLLTSLASIG 188

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +   G  +  I    I    I  ++ + +   +D+ ++   F +  + +  L L +
Sbjct: 189 SYAIIGGSDFSIGIYMIPGAIIGALIGTRLNKLLDEKWIAILFNVLLIALFALNLIK 245


>gi|46906866|ref|YP_013255.1| hypothetical protein LMOf2365_0650 [Listeria monocytogenes serotype
           4b str. F2365]
 gi|47091582|ref|ZP_00229378.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858]
 gi|226223250|ref|YP_002757357.1| hypothetical protein Lm4b_00647 [Listeria monocytogenes Clip81459]
 gi|254824106|ref|ZP_05229107.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|254853181|ref|ZP_05242529.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|254932104|ref|ZP_05265463.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|255521133|ref|ZP_05388370.1| hypothetical protein LmonocFSL_07891 [Listeria monocytogenes FSL
           J1-175]
 gi|300764423|ref|ZP_07074416.1| hypothetical protein LMHG_10294 [Listeria monocytogenes FSL N1-017]
 gi|46880132|gb|AAT03432.1| putative membrane protein [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47019901|gb|EAL10638.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858]
 gi|225875712|emb|CAS04415.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258606534|gb|EEW19142.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|293583660|gb|EFF95692.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|293593338|gb|EFG01099.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|300514777|gb|EFK41831.1| hypothetical protein LMHG_10294 [Listeria monocytogenes FSL N1-017]
 gi|328467449|gb|EGF38525.1| hypothetical protein LM1816_10167 [Listeria monocytogenes 1816]
 gi|332311041|gb|EGJ24136.1| Membrane protein [Listeria monocytogenes str. Scott A]
          Length = 246

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 121/255 (47%), Gaps = 24/255 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I    + +  +  +    G+GGG++++P+L     LMG+        +  T   +   T 
Sbjct: 3   IITYFLIALSTSVVGSFLGIGGGVILLPILL----LMGVSQGTAAFSSALTVFTMAIFT- 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA-IFCLLMGILM 141
             S    R+ G + + +          TT + +++   + ++     +  +  +L+GI++
Sbjct: 58  -CSIYYKRKQGNVGLAL--KIAVTSIPTTFLGAMVNQMLPEAVYRFLYGALIVVLLGIMI 114

Query: 142 LKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATAT 198
            K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +   A+AT
Sbjct: 115 WKKKRHNEKPHFLSEYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQKTASAT 174

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+ V+ L +  ++      G        +S+G       + ++P +I+   + T+L+ ++
Sbjct: 175 SSYVTLLTSLASIGSYAIIGGS-----DFSIG-------IYMIPGAIIGALIGTRLNKLL 222

Query: 259 GKKYLTIGFSMIMFT 273
            +K++ I F++++  
Sbjct: 223 DEKWIAILFNVLLIA 237



 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
              + +Y  +  V   + G L+GLFG+GGG +++P+L   F L           A  TS 
Sbjct: 124 PHFLSEYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLN-------QKTASATSS 176

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            V   TS+ S   +   G  +  I    I    I  ++ + +   +D+ ++   F +  +
Sbjct: 177 YVTLLTSLASIGSYAIIGGSDFSIGIYMIPGAIIGALIGTRLNKLLDEKWIAILFNVLLI 236

Query: 136 LMGILMLKR 144
            +  L L +
Sbjct: 237 ALFALNLIK 245


>gi|222150632|ref|YP_002559785.1| hypothetical protein MCCL_0382 [Macrococcus caseolyticus JCSC5402]
 gi|222119754|dbj|BAH17089.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 253

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 104/246 (42%), Gaps = 15/246 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I ++ +       +SGL G+GG +V+ P+L     + G    I   +A G +   +  
Sbjct: 4   SLILILSLIGAFGAFISGLVGIGGAIVIYPMLLFIPPIFGY--KITPELASGLTAAQVFF 61

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +++   M  R +  +N KI+    F + I +++ +   S  D   +N  +    ++   L
Sbjct: 62  STMSGSMSQRHNPDVNKKIIVPMGFGILIGSLMGAYSTSIFDGLLINTVYTFLAIVAVFL 121

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATS 199
           M  + +   E    +    +I  +V G LSG +G GG      ++L  + A      A+S
Sbjct: 122 MFVKVKTENECTHFNKISLFITALVIGILSGIVGAGGAFIIVPVLLAIFKAPFRSVVASS 181

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             ++ + +    L++  +G             ++   ++ ++  S+L  P+  K+S    
Sbjct: 182 IVIAFISSIGTFLMKSMTGQ------------IDFVMMIPLVIASLLFAPIGIKVSKRTN 229

Query: 260 KKYLTI 265
           ++ L +
Sbjct: 230 QQLLRV 235



 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 49/121 (40%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + + + + G LSG+ G GG  ++VPVL   F+             + +S+ +   +S+
Sbjct: 138 ISLFITALVIGILSGIVGAGGAFIIVPVLLAIFKA-------PFRSVVASSIVIAFISSI 190

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +F+     G I+  ++   +    +   +   +    ++  L    A+   L  I M+ 
Sbjct: 191 GTFLMKSMTGQIDFVMMIPLVIASLLFAPIGIKVSKRTNQQLLRVILALLIALAAIKMIM 250

Query: 144 R 144
            
Sbjct: 251 N 251


>gi|224419033|ref|ZP_03657039.1| integral membrane protein- permeases [Helicobacter canadensis MIT
           98-5491]
 gi|253827976|ref|ZP_04870861.1| integral membrane protein [Helicobacter canadensis MIT 98-5491]
 gi|253511382|gb|EES90041.1| integral membrane protein [Helicobacter canadensis MIT 98-5491]
          Length = 258

 Score = 89.4 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 105/258 (40%), Gaps = 24/258 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++    L+G L+GLFG+GGG ++VP++              + +A+G S+  +  +SV  
Sbjct: 14  LLAVGLLAGILAGLFGIGGGAIIVPMMILL--------GNDIKIAIGISIMQMIFSSVYG 65

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              + +   ++ +          I    + +++S +  S L   F++F +   +     +
Sbjct: 66  SYVNYKKKNLDFRDGVYVGIGGLIGASFSGVVVSSMPSSILEIIFSLFIVYSIMRFFFTN 125

Query: 146 RLYCERKFPDNYVKYIW----GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
               ERK  + +   ++    G V G  + +LG+GGG+    L+ +Y          S+ 
Sbjct: 126 AYGGERKVGEGWKSILFLIGCGCVVGVFAISLGIGGGMMLAPLLAYY-------LGYSSK 178

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
               I+   ++    SG+    L     G+V+     I+   S++   +       +  K
Sbjct: 179 QIVPISLFFVIFSSVSGFTSLALH----GYVDYAQGCIVGIASLIGVRIGIWTLSKVDSK 234

Query: 262 YLTIG-FSMIMFTTSFVF 278
                  +M +F  + +F
Sbjct: 235 KHKYALLAMYLFILAIMF 252



 Score = 42.8 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 12/124 (9%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
                   G++ G L+G  G+GGG     +M+  G  I  A   S       +       
Sbjct: 10  SAGGLLAVGLLAGILAGLFGIGGGAIIVPMMILLGNDIKIAIGISIMQMIFSSVYGS--- 66

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            Y  +    L      +V IG ++      ++++         +    L I FS+ +  +
Sbjct: 67  -YVNYKKKNLDFRDGVYVGIGGLIGASFSGVVVS--------SMPSSILEIIFSLFIVYS 117

Query: 275 SFVF 278
              F
Sbjct: 118 IMRF 121



 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 46/122 (37%), Gaps = 7/122 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  +I    + G  +   G+GGG+++ P+L+     +G      + +    SL  +  +S
Sbjct: 140 ILFLIGCGCVVGVFAISLGIGGGMMLAPLLAY---YLGYSSKQIVPI----SLFFVIFSS 192

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V  F     HG ++            I   +    +S VD      A     L +  +M 
Sbjct: 193 VSGFTSLALHGYVDYAQGCIVGIASLIGVRIGIWTLSKVDSKKHKYALLAMYLFILAIMF 252

Query: 143 KR 144
           ++
Sbjct: 253 EK 254


>gi|229817013|ref|ZP_04447295.1| hypothetical protein BIFANG_02268 [Bifidobacterium angulatum DSM
           20098]
 gi|229785758|gb|EEP21872.1| hypothetical protein BIFANG_02268 [Bifidobacterium angulatum DSM
           20098]
          Length = 280

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 98/259 (37%), Gaps = 24/259 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +C+++    ++G  SG+FG+GGG V+VP L            +    A  TS+  I  TS
Sbjct: 16  LCILLAVGLIAGLFSGMFGIGGGTVIVPALVWI--------GLTQRQAAATSICAIIITS 67

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA---FAIFCLLMGI 139
           +   + +   G ++          + + + + S ++S + + FL      F  F ++  I
Sbjct: 68  ISGVISYAHGGDVDWIAALLLAVGMMVGSQIGSWLLSRLSEVFLRWFYVVFLCFVIVSQI 127

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATAT 198
                                + G+  G L+G LG+GGG      +   +GAS   A  T
Sbjct: 128 CFTPSRDSSIALTPETGIAIILVGVFIGTLAGLLGIGGGAIAVPSLSLIFGASDLIARGT 187

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S       +  A +                   V +   L+I  +S L  PL T ++  +
Sbjct: 188 SLLAMFPSSITATVANSKRNL------------VIVKDGLVIGIVSALSAPLGTMIAGTV 235

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             +  T  F++ +   +  
Sbjct: 236 SPRVGTNLFTVYLVVIAAR 254


>gi|217965284|ref|YP_002350962.1| domain of unknown function [Listeria monocytogenes HCC23]
 gi|290892820|ref|ZP_06555811.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|217334554|gb|ACK40348.1| domain of unknown function, putative [Listeria monocytogenes HCC23]
 gi|290557632|gb|EFD91155.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|307570160|emb|CAR83339.1| conserved hypothetical protein [Listeria monocytogenes L99]
          Length = 246

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 124/258 (48%), Gaps = 25/258 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D I   ++A   +  +    G+GGG++++P+L     LMG+        +  T   +  
Sbjct: 1   MDMITYFLIA-LSTSVVGSFLGIGGGVILLPILL----LMGVSQGTAAFSSALTVFTMAI 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA-IFCLLMG 138
            T   S    R+ G + + +          TT + +++   + ++     +  +  +L+G
Sbjct: 56  FT--CSIYYKRKQGNVGLAL--KIAVTSIPTTFLGAMVNQMLPEAVYRFLYGALIVVLLG 111

Query: 139 ILMLKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKA 195
           I++ K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +   A
Sbjct: 112 IMIWKKKRHNEKPHFLSEYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQKTA 171

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +ATS+ V+ L +  ++      G        +S+G       + ++P +I+   + T+L+
Sbjct: 172 SATSSYVTLLTSLASIGSYAIIGGS-----DFSIG-------IYMIPGAIIGALIGTRLN 219

Query: 256 YMIGKKYLTIGFSMIMFT 273
            ++ +K++ I F++++  
Sbjct: 220 KLLDEKWIAILFNVLLIA 237



 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
              + +Y  +  V   + G L+GLFG+GGG +++P+L   F L           A  TS 
Sbjct: 124 PHFLSEYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLN-------QKTASATSS 176

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            V   TS+ S   +   G  +  I    I    I  ++ + +   +D+ ++   F +  +
Sbjct: 177 YVTLLTSLASIGSYAIIGGSDFSIGIYMIPGAIIGALIGTRLNKLLDEKWIAILFNVLLI 236

Query: 136 LMGILMLKR 144
            +  L L +
Sbjct: 237 ALFALNLIK 245


>gi|295401033|ref|ZP_06811007.1| protein of unknown function DUF81 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294976826|gb|EFG52430.1| protein of unknown function DUF81 [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 258

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 110/263 (41%), Gaps = 18/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++++ +I +  F+   +SG+ G+GG +V  P+L     L G+  +   H   G S   + 
Sbjct: 3   INFVIVIFLIGFIGSFISGMVGIGGSIVKYPMLLYLPPLFGL-AAFSAHEVSGISAVQVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++     +R+ G +N  ++      + I + +       + +  +N  + +   L  +
Sbjct: 62  FATIGGVWAYRKSGYLNKTLIFYMGISILIGSFLGGFGSKMMSEGTINVVYGVLAALAAV 121

Query: 140 LMLKRDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI-FTNLLMLFYGASIYK 194
           +M    +    +  ++   + ++     +V G  SG +G  G      ++++        
Sbjct: 122 MMFVPKKGIDDVPIDQVTFNKWLAAALALVIGIGSGIVGAAGAFLLVPVMLVVLKIPTRM 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             A+S  ++ + +  + L +I            + G V I   +I++  S++ +PL  K+
Sbjct: 182 TIASSLAITLISSIGSTLGKI------------TAGQVAIIPAIIMVIASLIASPLGAKM 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K L +  ++++  T+  
Sbjct: 230 GQKMNTKILQVILALLILATAIK 252



 Score = 35.8 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+  L+ + G+G G+V          +M +   I   + + +SL +   +S+ S +    
Sbjct: 144 LAAALALVIGIGSGIVGAAGAFLLVPVMLVVLKIPTRMTIASSLAITLISSIGSTLGKIT 203

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            G + +      +    I + + + M   ++   L    A+  L   I + 
Sbjct: 204 AGQVAIIPAIIMVIASLIASPLGAKMGQKMNTKILQVILALLILATAIKIW 254


>gi|321312144|ref|YP_004204431.1| YrkJ [Bacillus subtilis BSn5]
 gi|320018418|gb|ADV93404.1| YrkJ [Bacillus subtilis BSn5]
          Length = 258

 Score = 89.0 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 112/263 (42%), Gaps = 18/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +I  + +  F+   +SG+ G+GG ++  P+L     L+G+  S+  H   G     + 
Sbjct: 3   IAFITTLFIIGFIGAFISGMIGIGGAVINYPMLLYIPSLVGV-MSLTAHEVSGIGAIQVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++     +R+ G +N  ++      + + +V+ S    ++ +  +N  + I  ++  I
Sbjct: 62  FATLGGVWAYRKSGLLNKALIIYMGSSILLGSVLGSYFSHYISEKGINFIYGILAIIAVI 121

Query: 140 LMLKRDRLYCERK----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYK 194
           LM    R    R+      + ++      + G +SG LG GG      +ML      +  
Sbjct: 122 LMFIPKRGQAHREGEEVIFNKWLASSLAFIIGGVSGILGAGGAFILVPIMLSILNIPVRI 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             A+S  ++ L +  A + ++ +G             + + A+++++  S + +P+   +
Sbjct: 182 TVASSLAITFLSSIGATVGKVMTGQV-----------LFVPALVLMI-ASFIASPIGASV 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
                 K+L    ++++  T+  
Sbjct: 230 GQKANTKFLQWILALLISATAIK 252



 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 7/129 (5%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
             + V+    L    +F+ G +SG+ G GG  ++VP++           +I + + + +S
Sbjct: 134 EGEEVIFNKWLASSLAFIIGGVSGILGAGGAFILVPIMLSIL-------NIPVRITVASS 186

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           L +   +S+ + +     G +        +    I + + + +    +  FL    A+  
Sbjct: 187 LAITFLSSIGATVGKVMTGQVLFVPALVLMIASFIASPIGASVGQKANTKFLQWILALLI 246

Query: 135 LLMGILMLK 143
               I +  
Sbjct: 247 SATAIKIWL 255


>gi|228983974|ref|ZP_04144164.1| hypothetical protein bthur0001_6870 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228775794|gb|EEM24170.1| hypothetical protein bthur0001_6870 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 265

 Score = 89.0 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 102/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 12  MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTAHEVSGITAVQVF 70

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + + +  +N  +A    +  I
Sbjct: 71  FATFAGAWAYRKSNDMDKTLVMYMGASILIGSFIGSFGANVLAEHTVNVVYAALATIAAI 130

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R   +    + ++  +   + G  SG +G GG      +ML      I    AT
Sbjct: 131 MMFVPKRNNGDEVKYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRTTIAT 190

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V I A++ +   SI   PL  ++   I
Sbjct: 191 SIAITFISSVGITTGKVITGQV-----------VVIPALI-VAIASIFAAPLGARVGKRI 238

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 239 NQKALQYMLSILIVGTAVKM 258


>gi|150017843|ref|YP_001310097.1| hypothetical protein Cbei_3002 [Clostridium beijerinckii NCIMB
           8052]
 gi|149904308|gb|ABR35141.1| protein of unknown function DUF81 [Clostridium beijerinckii NCIMB
           8052]
          Length = 272

 Score = 89.0 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 97/279 (34%), Gaps = 40/279 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              +    FL G    L G GGG ++VP+L   +     D    +      SL V+   +
Sbjct: 4   FLWLTPLGFLVGAFGTLIGAGGGFILVPILLLLYPDKSPDTITSI------SLAVVFFNA 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +     + R   I+ K    +       +++ S++ S+V +   N  F +  +++ + ++
Sbjct: 58  LSGSFAYSRMKRIDYKSGIIFAIATLPGSILGSVITSYVPRQLFNGIFGVLLVIISVFLI 117

Query: 143 KRDRLYCERKFP-----------------------DNYVKYIWGMVTGFLSGALGVGGGI 179
            R +                               +     +  +  GF+S  LG+GGGI
Sbjct: 118 LRTKDEKAENRLVVKNGYITRTVVDIEGIEHTFSYNPVTGIVVSIFVGFMSSFLGIGGGI 177

Query: 180 FTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
               +++      ++ ATATS  V A+++    +V I +G   +          +     
Sbjct: 178 IHVPVLVNILNYPVHIATATSHFVLAVMSLSGTMVHIVNGVLQS----------SFIQTA 227

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            +    +    L   LS  I    +    ++ +      
Sbjct: 228 ALSIGVLFGAQLGATLSKKIHGVAIIRSLAVALAIVGVR 266



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 9/118 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IV S   G +S   G+GGG++ VPVL           +  +H+A  TS  V+A  S+   
Sbjct: 158 IVVSIFVGFMSSFLGIGGGIIHVPVLVNIL-------NYPVHIATATSHFVLAVMSLSGT 210

Query: 87  MEHRRHGTINMKILKD--WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           M H  +G +    ++       +     + + +   +    + ++ A+   ++G+ + 
Sbjct: 211 MVHIVNGVLQSSFIQTAALSIGVLFGAQLGATLSKKIHGVAIIRSLAVALAIVGVRIF 268


>gi|172039707|ref|YP_001799421.1| hypothetical protein cur_0027 [Corynebacterium urealyticum DSM
           7109]
 gi|171851011|emb|CAQ03987.1| hypothetical protein cu0027 [Corynebacterium urealyticum DSM 7109]
          Length = 303

 Score = 89.0 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 51/284 (17%), Positives = 95/284 (33%), Gaps = 53/284 (18%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V + L G   GLFG GG ++MVP+LS                ++  SL ++  TS+ S  
Sbjct: 30  VLAILVGITIGLFGGGGAILMVPILSYIAGW-------PTQDSITGSLFIVGLTSLFSTF 82

Query: 88  EH-----------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            H            + G +       +  +  +       + + +    +   FAI  + 
Sbjct: 83  LHARPTKEQRERGHKKGNVRWGTGVVFGGLAMLGAFAGGQLTALLPGIVVMTIFAIVMIA 142

Query: 137 MGILMLKRDRLYCERKFPDNYVKY----------------------IWGMVTGFLSGALG 174
            GI M++  +            K                       +  +  G +SG +G
Sbjct: 143 SGIGMVRGRKPSAPAPPSATDGKATPSSVGTAASLPLTRAQKVKIVLAALGIGVISGLVG 202

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
            GGG      + L  G ++  A  TS     ++A  +    +     ++         V+
Sbjct: 203 AGGGFLVVPALALLVGFTMPAAVGTSL---LVVAMQSASGFLSHILHVD---------VD 250

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             A+  +  +++  T L T L   I    L   F + +   + V
Sbjct: 251 WQALGSLTGLAMAGTILGTLLGSHIPAAKLKRAFGVFVLLMAAV 294



 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 7/120 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I++A+   G +SGL G GGG ++VP L+             M  A+GTSL V+A  S   
Sbjct: 187 IVLAALGIGVISGLVGAGGGFLVVPALALLVGF-------TMPAAVGTSLLVVAMQSASG 239

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           F+ H  H  ++ + L     +    T++ +L+ SH+  + L +AF +F LLM  ++L ++
Sbjct: 240 FLSHILHVDVDWQALGSLTGLAMAGTILGTLLGSHIPAAKLKRAFGVFVLLMAAVVLAQE 299


>gi|260914000|ref|ZP_05920474.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260632087|gb|EEX50264.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 266

 Score = 88.6 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 103/260 (39%), Gaps = 10/260 (3%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I ++I+   ++  +S +FG+GGG++MVP+L   F          + +   TSL ++ 
Sbjct: 3   LQLIFILIICGAMTNLMSAIFGIGGGVLMVPILYTLF------PEFPLQMIAATSLTIVI 56

Query: 80  PTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            +++++     +    IN K +  W   + I   +      ++   F+   F     ++ 
Sbjct: 57  GSALINLTYFYKQKIQINFKAMLLWSLGMIIGVQLGFEASFYLPDIFIIVVFISVLTILA 116

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWG--MVTGFLSGALGVGGGIFTNLLM-LFYGASIYKA 195
           I  +   +         N      G  +  G ++G  G+GGG     L+   +    ++ 
Sbjct: 117 IRTIFFSKSTKADSVEKNENLKGAGLCLFGGTVAGMTGIGGGSIMAPLIGQLHSIKPHQI 176

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
              +  +  +  F +L   +      +    W +G+VN   V I++  S   + L+ K+ 
Sbjct: 177 APYTNYMMVIGGFGSLYGYLSKTPPFHLDYGWQIGYVNFSIVAIVVLSSFATSFLSMKIR 236

Query: 256 YMIGKKYLTIGFSMIMFTTS 275
            ++          +I+   +
Sbjct: 237 GILHPDVAKKLLGIILLAIA 256


>gi|94984722|ref|YP_604086.1| hypothetical protein Dgeo_0615 [Deinococcus geothermalis DSM 11300]
 gi|94555003|gb|ABF44917.1| protein of unknown function DUF81 [Deinococcus geothermalis DSM
           11300]
          Length = 250

 Score = 88.6 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 71/227 (31%), Gaps = 16/227 (7%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       G    I +  A+  S   +    +     + + G +  +          +
Sbjct: 28  PALEFVLPHFG--RDITIQQAVAVSQIGVLAVGLSGAASYLQQGLVRARTGYLLSPYTIL 85

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
                S +   +    +   FA+  L     +L+  +     + P   V        G +
Sbjct: 86  GGAAGSFLGLVLPARVVATVFALLLLYSAYNLLRGLKRVEVERTPSRLVPPAM-TFAGIM 144

Query: 170 SGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG LG+GGG     ++    G  I +A ATS  +  L A    LV    G     L    
Sbjct: 145 SGLLGIGGGTVQVPVLNLLAGIPIRQAIATSTFIMGLTAVGNALVYQAGGLLDVRL---- 200

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                      +    ++       L   I    L + FS+++  T+
Sbjct: 201 --------AAGVALGVLVGARAGAGLQSRIPAAGLKLFFSLLLIFTA 239



 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 53/113 (46%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
            +G +SGL G+GGG V VPVL+           I +  A+ TS  ++  T+V + + ++ 
Sbjct: 140 FAGIMSGLLGIGGGTVQVPVLNLL-------AGIPIRQAIATSTFIMGLTAVGNALVYQA 192

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G +++++       + +     + + S +  + L   F++  +     +L +
Sbjct: 193 GGLLDVRLAAGVALGVLVGARAGAGLQSRIPAAGLKLFFSLLLIFTAGQLLWK 245


>gi|227329064|ref|ZP_03833088.1| hypothetical protein PcarcW_17710 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 230

 Score = 88.6 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 95/244 (38%), Gaps = 22/244 (9%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           + G+GGGL+ +P+L   F        +  H+A GT+L +I P  ++ F+ +R+   I+ +
Sbjct: 1   MLGIGGGLIAIPILGVLF-------GMDQHMAQGTALVMITPNVLIGFLRYRQRNRIDTR 53

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG----ILMLKRDRLYCERKFP 154
           +          +  + + + S +D   L +AFA F L++          + R        
Sbjct: 54  VALTMCAFATGSAYLAAHIASSIDVHNLQRAFATFLLVLAAFYMWQWYNKKRSQTSEIVL 113

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
                 + G+ +GF+SG   V       +++         A   + G++ ++  P  L  
Sbjct: 114 STKYLPLLGVASGFMSGIFTV---GGGLVVVPVLVTLFAFAQTQAQGMALILVVPGALAA 170

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           + S +   G   W +G       L +    I        L++ +   YL   F +++   
Sbjct: 171 LLS-YSQAGNVDWGIG-------LPLALGGIFSVSWGVALAHKLPVVYLRGAFCLMLIGV 222

Query: 275 SFVF 278
               
Sbjct: 223 GITM 226



 Score = 40.4 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 45/118 (38%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            + +    SG +SG+F VG              ++    +     A G +L ++ P ++ 
Sbjct: 117 YLPLLGVASGFMSGIFTVG-------GGLVVVPVLVTLFAFAQTQAQGMALILVVPGALA 169

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + + + G ++  I          +      +   +   +L  AF +  + +GI ML
Sbjct: 170 ALLSYSQAGNVDWGIGLPLALGGIFSVSWGVALAHKLPVVYLRGAFCLMLIGVGITML 227


>gi|313610283|gb|EFR85539.1| integral membrane protein, putative [Listeria monocytogenes FSL
           F2-208]
          Length = 244

 Score = 88.6 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 124/258 (48%), Gaps = 25/258 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D I   ++A   +  +    G+GGG++++P+L     LMG+        +  T   +  
Sbjct: 1   MDMITYFLIA-LSTSVVGSFLGIGGGVILLPILL----LMGVSQGTAAFSSALTVFTMAI 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA-IFCLLMG 138
            T   S    R+ G + + +          TT + +++   + ++     +  +  +L+G
Sbjct: 56  FT--CSIYYKRKQGNVGLAL--KIAVTSIPTTFLGAMVNQMLPEAVYRFLYGALIVVLLG 111

Query: 139 ILMLKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKA 195
           I++ K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +   A
Sbjct: 112 IMIWKKKRHNEKPHFLSEYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQKTA 171

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +ATS+ V+ L +  ++      G        +S+G       + ++P +I+   + T+L+
Sbjct: 172 SATSSYVTLLTSLASIGSYAIIGGS-----DFSIG-------IYMIPGAIIGALIGTRLN 219

Query: 256 YMIGKKYLTIGFSMIMFT 273
            ++ +K++ I F++++  
Sbjct: 220 KLLDEKWIAILFNVLLIA 237



 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 7/122 (5%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
              + +Y  +  V   + G L+GLFG+GGG +++P+L   F L           A  TS 
Sbjct: 124 PHFLSEYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLN-------QKTASATSS 176

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            V   TS+ S   +   G  +  I    I    I  ++ + +   +D+ ++   F +  +
Sbjct: 177 YVTLLTSLASIGSYAIIGGSDFSIGIYMIPGAIIGALIGTRLNKLLDEKWIAILFNVLLI 236

Query: 136 LM 137
            +
Sbjct: 237 AL 238


>gi|298694162|gb|ADI97384.1| probable membrane protein [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 275

 Score = 88.6 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 92/249 (36%), Gaps = 33/249 (13%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       G+  +I   +A+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTLVYLGVEHGLLHNITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            +++ S +  ++     N  F IF + + IL++ R+++   + F                
Sbjct: 92  GSLLGSFISRYLTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                     +I   + G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YHYSVPPLFAFITTFLIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            + +  I              G V  G  +I++  S     +  K++  I    +     
Sbjct: 212 MSSIGHIAQ------------GHVAWGYAIILIISSYFGAKIGVKVNQSIKSDTVVTILR 259

Query: 269 MIMFTTSFV 277
            +M      
Sbjct: 260 TVMLLMGIY 268



 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
               + +FL G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SV
Sbjct: 159 LFAFITTFLIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSV 211

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           MS + H   G +        I        +   +   +    +        LLMGI ++ 
Sbjct: 212 MSSIGHIAQGHVAWGYAIILIISSYFGAKIGVKVNQSIKSDTVVTILRTVMLLMGIYLII 271

Query: 144 R 144
           R
Sbjct: 272 R 272


>gi|49483083|ref|YP_040307.1| hypothetical protein SAR0885 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257424971|ref|ZP_05601398.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427638|ref|ZP_05604037.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430273|ref|ZP_05606656.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432970|ref|ZP_05609330.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435874|ref|ZP_05611922.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903460|ref|ZP_06311351.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           C160]
 gi|282905238|ref|ZP_06313095.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908218|ref|ZP_06316049.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910499|ref|ZP_06318303.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913695|ref|ZP_06321484.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           M899]
 gi|282918621|ref|ZP_06326358.1| hypothetical protein SASG_02176 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282923611|ref|ZP_06331291.1| hypothetical protein SARG_00931 [Staphylococcus aureus subsp.
           aureus C101]
 gi|283957661|ref|ZP_06375114.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500737|ref|ZP_06666588.1| hypothetical protein SCAG_01267 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293509688|ref|ZP_06668399.1| hypothetical protein SAZG_00836 [Staphylococcus aureus subsp.
           aureus M809]
 gi|293524275|ref|ZP_06670962.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           M1015]
 gi|295427406|ref|ZP_06820041.1| hypothetical protein SIAG_01944 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297590234|ref|ZP_06948873.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|49241212|emb|CAG39891.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257272541|gb|EEV04664.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275831|gb|EEV07304.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279050|gb|EEV09661.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282385|gb|EEV12520.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285065|gb|EEV15184.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|282314479|gb|EFB44869.1| hypothetical protein SARG_00931 [Staphylococcus aureus subsp.
           aureus C101]
 gi|282317755|gb|EFB48127.1| hypothetical protein SASG_02176 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282322727|gb|EFB53049.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           M899]
 gi|282325891|gb|EFB56199.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327883|gb|EFB58165.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331645|gb|EFB61157.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282596415|gb|EFC01376.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           C160]
 gi|283791112|gb|EFC29927.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290921238|gb|EFD98299.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291095742|gb|EFE26003.1| hypothetical protein SCAG_01267 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291467785|gb|EFF10300.1| hypothetical protein SAZG_00836 [Staphylococcus aureus subsp.
           aureus M809]
 gi|295128794|gb|EFG58425.1| hypothetical protein SIAG_01944 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297576533|gb|EFH95248.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|312438715|gb|ADQ77786.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|315194454|gb|EFU24846.1| hypothetical protein CGSSa00_12045 [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 275

 Score = 88.6 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 92/249 (36%), Gaps = 33/249 (13%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P +       G+  +I   +A+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTMVYLGVEHGLLHNITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            +++ S +  ++     N  F IF + + IL++ R+++   + F                
Sbjct: 92  GSLLGSFISRYLTFESFNLYFGIFLIFVAILLMVRNKIKPFKTFDKPKYEKTYVDAKGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                     +I   + G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YHYSVPPLFAFITTFLIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            + +  I              G V  G  +I++  S     +  K++  I    +     
Sbjct: 212 MSSIGHIAQ------------GHVAWGYAIILIISSYFGAKIGVKVNQSIKSDTVVTLLR 259

Query: 269 MIMFTTSFV 277
            +M      
Sbjct: 260 TVMLLMGIY 268


>gi|119026567|ref|YP_910412.1| hypothetical protein BAD_1549 [Bifidobacterium adolescentis ATCC
           15703]
 gi|118766151|dbj|BAF40330.1| widely conserved hypothetical transmembrane protein with dub81
           [Bifidobacterium adolescentis ATCC 15703]
          Length = 292

 Score = 88.6 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 93/253 (36%), Gaps = 24/253 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++IV   L G LSG FG+GGG V+VP L            +    A  TS   I PTS
Sbjct: 37  IIVLIVVGMLVGVLSGTFGIGGGTVIVPALVWL--------GLSQRNAAATSTLAIVPTS 88

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-- 140
           +   + +   G ++          + +   + S ++S + +  L   F  F + + I   
Sbjct: 89  ISGVVSYATGGHVDWLAAALLFCGMFVGGQIGSWLLSRLPELVLRWIFVAFLVFVVINQV 148

Query: 141 -MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
             +                  + G+V G L+G LG+GGG      +   +GAS   A  T
Sbjct: 149 SFVPSRDHQIVMTVVTGIGLALLGVVIGTLAGLLGIGGGALAVPSLSMLFGASDLVARGT 208

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S       +       +                 ++   LII   + +  PL T ++  +
Sbjct: 209 SLLAMFPNSITTSAANLKRRLA------------HVKTALIIGVTAAVTAPLGTWIAGEV 256

Query: 259 GKKYLTIGFSMIM 271
             +   I F+  +
Sbjct: 257 SPRVGAIMFACYL 269



 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 12/117 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           V  + GM+ G LSG  G+GGG      +++ G S   A ATS       +   ++     
Sbjct: 39  VLIVVGMLVGVLSGTFGIGGGTVIVPALVWLGLSQRNAAATSTLAIVPTSISGVVSYATG 98

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                       G V+  A  ++     +   + + L   + +  L   F   +   
Sbjct: 99  ------------GHVDWLAAALLFCGMFVGGQIGSWLLSRLPELVLRWIFVAFLVFV 143



 Score = 36.6 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 35/95 (36%), Gaps = 7/95 (7%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP LS  F    +       VA GTSL  + P S+ +   + +    ++K          
Sbjct: 191 VPSLSMLFGASDL-------VARGTSLLAMFPNSITTSAANLKRRLAHVKTALIIGVTAA 243

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +T  + + +   V        FA +  ++ +  + 
Sbjct: 244 VTAPLGTWIAGEVSPRVGAIMFACYLCVLLVRSVF 278


>gi|293394199|ref|ZP_06638499.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291423177|gb|EFE96406.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 276

 Score = 88.6 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 97/223 (43%), Gaps = 3/223 (1%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           + + C +  + +I+ A FL+G  + LFG GGG V+VP +       G      MH+A+ T
Sbjct: 9   VQRQCSMTELIIILSAGFLTGITTILFGFGGGFVVVPFVYHLISASGEHPGQAMHIAVAT 68

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           S  V+   +  +   H R G+I  + +   I  + +  +  +L  + +    +   F  +
Sbjct: 69  STTVMILNAGYATYGHWRSGSILRETVVPLILFIALGALAGALAATLLTDGVIRLLFIAY 128

Query: 134 CLLMGILMLKRDRL--YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
            ++     L          R+   +   ++ G + G ++  LGVGG + T  L+  +G  
Sbjct: 129 MVITIADCLFHKGFLQRPARRALSSRTLWLGGSLIGSVAAMLGVGGSVMTVPLLRRHGYE 188

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           +    + +  +S  +A     +  + G G      + LG+VN+
Sbjct: 189 MKYCVSAANPLSIAVAVMGAAIYGWLGQGKIAGAAY-LGYVNM 230


>gi|300696738|ref|YP_003747399.1| hypothetical protein RCFBP_mp10188 [Ralstonia solanacearum
           CFBP2957]
 gi|299073462|emb|CBJ52978.1| conserved membrane protein of unknown function, DUF81 [Ralstonia
           solanacearum CFBP2957]
          Length = 264

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 92/235 (39%), Gaps = 29/235 (12%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            ++G    +  H+A GT+L +IAP  ++ F  + +H  + ++ +        ++T V + 
Sbjct: 36  PILGYLYGMDQHLAQGTALVMIAPNVLIGFWRYHQHHPVPLRSVATLCAFAMVSTYVAAR 95

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDR---------------LYCERKFPDNYVKYI 161
             + +D + L  AFA F + + +    + R                   R  P   V  +
Sbjct: 96  FAAGLDAAHLRTAFAWFLIALAVYFASQLRDKARPDAASVHPDPAPGAARAMP-PAVLPL 154

Query: 162 WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G+ +G +SG   VGGG+     L+  +G S  +A   +  ++   +  AL    ++   
Sbjct: 155 LGIASGGMSGIFTVGGGLVVVPALVTLFGMSQTRAQGMALALAVPGSLIALAAYAHA--- 211

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                    G VN G  + +    ++       L++      L + F  ++   +
Sbjct: 212 ---------GHVNWGTGIALALGGMVSVSWGVALAHRFSPLRLRLVFCAVLLGAA 257



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +    SG +SG+F VGGGLV+VP L   F        +    A G +L +  P S+
Sbjct: 150 AVLPLLGIASGGMSGIFTVGGGLVVVPALVTLF-------GMSQTRAQGMALALAVPGSL 202

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++   +   G +N            ++      +        L   F    L   + ML
Sbjct: 203 IALAAYAHAGHVNWGTGIALALGGMVSVSWGVALAHRFSPLRLRLVFCAVLLGAAVAML 261


>gi|87310558|ref|ZP_01092687.1| putative membrane protein [Blastopirellula marina DSM 3645]
 gi|87286779|gb|EAQ78684.1| putative membrane protein [Blastopirellula marina DSM 3645]
          Length = 262

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 86/257 (33%), Gaps = 25/257 (9%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
            FL G    L G GGG V+VP+L                     SL V+   +    + +
Sbjct: 16  GFLVGGYGTLVGAGGGSVLVPILLMMM------PDESPAKITAISLAVVFFNAYSGTVAY 69

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
            R G I+ +    +        ++ ++++  + +   +  F    +L+G  +        
Sbjct: 70  MRMGRIDYRAGTIFTVAGIPGAILGTMLVREMPRELFDPIFGTLLVLIGAWLFSNPLGST 129

Query: 150 ERK----FPDNYVKYIWGMV----TGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSA 200
                   P    + + G +     G +S  LG+GGGI     ++       + ATATS 
Sbjct: 130 SETDNTNQPIAGTRMLIGSLGSAYIGVVSSLLGIGGGIIHVPFLIRALKMPPHFATATSH 189

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            V   IA  A +  +  G     L             + +    ++  P+   +S  +  
Sbjct: 190 FVLTFIALTATITHVSMGEFQGELS----------TTMYLAVGVMMGAPIGAAVSTKLKG 239

Query: 261 KYLTIGFSMIMFTTSFV 277
             +    ++ +      
Sbjct: 240 SLIVKMLALALCFVGIR 256


>gi|228963878|ref|ZP_04125014.1| hypothetical protein bthur0004_7430 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228795857|gb|EEM43329.1| hypothetical protein bthur0004_7430 [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 254

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 101/260 (38%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++      +G       H   G +   + 
Sbjct: 1   MSLVLLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVFLGFT-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + +++  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKTLVVYMGASILIGSFIGSFGANVLEEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R        + ++  +   + G  SG +G GG      +ML      I    AT
Sbjct: 120 MMFVPKRNNSGEVKYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRTTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V I A++ I   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQV-----------VVIPALI-IAVASIFAAPLGVRVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAVKM 247


>gi|239636555|ref|ZP_04677557.1| conserved hypothetical protein [Staphylococcus warneri L37603]
 gi|239597910|gb|EEQ80405.1| conserved hypothetical protein [Staphylococcus warneri L37603]
          Length = 275

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 94/249 (37%), Gaps = 33/249 (13%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L        I   I   +A+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTLVYLGVDHSILHGITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            +++ S +  ++     N  F IF + + IL++ R ++   + F                
Sbjct: 92  GSLIGSFLSQYLTLKSFNLYFGIFMIFVAILLMVRHKIKPFKIFNKPQYEKTYIDAEGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                  +V ++  ++ G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YHYSVPPFVAFVATLLIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            + +  I              G V     ++++  S +   +  K+++ I    + +   
Sbjct: 212 MSSIGHIIQ------------GHVAWDYSIVLIISSYIGAKIGVKVNHSIKSDTVVMLLR 259

Query: 269 MIMFTTSFV 277
            +M      
Sbjct: 260 TVMLLIGAY 268



 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 7/119 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            VA+ L G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS 
Sbjct: 162 FVATLLIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSS 214

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           + H   G +        I    I   +   +   +    +        LL+G  ++ + 
Sbjct: 215 IGHIIQGHVAWDYSIVLIISSYIGAKIGVKVNHSIKSDTVVMLLRTVMLLIGAYLIIKS 273


>gi|313894189|ref|ZP_07827754.1| putative membrane protein [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441013|gb|EFR59440.1| putative membrane protein [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 264

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 96/271 (35%), Gaps = 28/271 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D +V +     +  FL+  L  + G GGGL+ VP+    F            + +GTSL 
Sbjct: 3   DNIVLFYIFFTIVGFLAAMLGTIIGAGGGLIFVPLFMYWF------PEWSPSMIVGTSLF 56

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   ++   + + +   + +     +        ++ + M           AF  F L 
Sbjct: 57  SVMCNAISGSIAYLKQKKVYISAALVFSVATFPGAILGAQMSGWFSGKGFMFAFGCFMLC 116

Query: 137 MGILMLKRDRLYCERKFP---------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
              L+  ++    ERK              V     +V GF+S   G+GGG+     +++
Sbjct: 117 ASFLIGFKNFRKGERKEESLTLDQLTYSKPVGISISIVVGFISSIFGIGGGLIHVPALIY 176

Query: 188 Y-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
             G   + ATATS  + A+     ++  +           +S+        +     +I 
Sbjct: 177 LMGFPTHMATATSQSILAVSTTVGVITHLI-----ENHIVFSI-------AIPTSIGAIF 224

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                 +++  +  K +    S+ +F  +  
Sbjct: 225 GAQAGARIAKRLKAKAILALMSVAVFALAVR 255



 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 50/136 (36%), Gaps = 7/136 (5%)

Query: 12  VFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
             L+ D +     + I  S + G +S +FG+GGGL+ VP L               H+A 
Sbjct: 134 ESLTLDQLTYSKPVGISISIVVGFISSIFGIGGGLIHVPALIYLMGF-------PTHMAT 186

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
            TS  ++A ++ +  + H     I   I               + +   +    +    +
Sbjct: 187 ATSQSILAVSTTVGVITHLIENHIVFSIAIPTSIGAIFGAQAGARIAKRLKAKAILALMS 246

Query: 132 IFCLLMGILMLKRDRL 147
           +    + + ++ +  +
Sbjct: 247 VAVFALAVRLILKSGI 262


>gi|302332536|gb|ADL22729.1| sulfite exporter TauE/SafE-like protein [Staphylococcus aureus
           subsp. aureus JKD6159]
          Length = 275

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 92/249 (36%), Gaps = 33/249 (13%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       G+  +I   +A+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTLVYLGVEHGLLHNITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            +++ S +  ++     N  F IF + + IL++ R+++   + F                
Sbjct: 92  GSLLGSFISRYLTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                     +I   + G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YHYSVPPLFAFITTFLIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            + +  I              G V  G  +I++  S     +  K++  I    +     
Sbjct: 212 MSSIGHIAQ------------GHVAWGYAIILIISSYFGAKIGVKVNQSIKSDTVVTLLR 259

Query: 269 MIMFTTSFV 277
            +M      
Sbjct: 260 TVMLLMGIY 268


>gi|108803100|ref|YP_643037.1| hypothetical protein Rxyl_0248 [Rubrobacter xylanophilus DSM 9941]
 gi|108764343|gb|ABG03225.1| protein of unknown function DUF81 [Rubrobacter xylanophilus DSM
           9941]
          Length = 254

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 21/259 (8%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            ++ ++  A    G LSGLFGVGGG V VP L              +  A+  SL +I  
Sbjct: 4   THLLILGAAGLFGGILSGLFGVGGGGVFVPALVY-------GAGWNIKEAVAASLVIIVF 56

Query: 81  TSVMSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           +++   +   R  + +N ++   +   +  + ++   +        +   F  F L +  
Sbjct: 57  SALSGTVRSMRSESPVNWRVAALFSCTVAPSALIGVFVSRFSPDDVVELVFGCFLLSLAY 116

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATAT 198
              +R      R+     +  + G+  G LSG +G+GG      LM+  +G S   A +T
Sbjct: 117 PTFRRGSGRGGRRSLPPALALLGGVGVGTLSGLIGIGGAAMMVPLMMLGFGVSPKSAIST 176

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ L+        I +G+              +G +  ++  ++    L  +L   +
Sbjct: 177 SLAITVLLGSVGAAGYILTGFDR------------LGGLPPLIACAMAGAWLGVRLRDRL 224

Query: 259 GKKYLTIGFSMIMFTTSFV 277
            + +L   F+  M   +  
Sbjct: 225 SEGFLQRAFAAFMVVVAVR 243



 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++     GTLSGL G+GG  +MVP++   F        +    A+ TSL +      
Sbjct: 134 ALALLGGVGVGTLSGLIGIGGAAMMVPLMMLGF-------GVSPKSAISTSLAITVLLGS 186

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +    +   G   +  L   I        +   +   + + FL +AFA F +++ + +L 
Sbjct: 187 VGAAGYILTGFDRLGGLPPLIACAMAGAWLGVRLRDRLSEGFLQRAFAAFMVVVAVRVLY 246

Query: 144 R 144
            
Sbjct: 247 D 247


>gi|116750841|ref|YP_847528.1| hypothetical protein Sfum_3420 [Syntrophobacter fumaroxidans MPOB]
 gi|116699905|gb|ABK19093.1| protein of unknown function DUF81 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 269

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 91/237 (38%), Gaps = 25/237 (10%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M+P++    ++         H A GTSL  +  T +   + + ++G++++         
Sbjct: 23  IMIPLMVDFLKM-------TQHRAHGTSLVAVVFTGLAGAVTYFQNGSVDLTAAGILATA 75

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR-LYCERKFPDNYVKYIW--- 162
              TT + +     + +  L ++F  F L +  +ML +    + E  FP    + +    
Sbjct: 76  AIFTTRIGARFAHALPEWKLKRSFGAFLLFVSAMMLAKPYLPHLESFFPSQEARAVILPA 135

Query: 163 -GMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G + GF SG +GVGGG      M+   G + + A  TS     +               
Sbjct: 136 SGTLAGFASGMMGVGGGTIMVPAMVLCLGFTQHAANGTSLAAMVVAGSVGAWT------- 188

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                 + L  V  G ++ ++P  I    +    +  + + YL + FS ++      
Sbjct: 189 -----HFRLNNVQTGHLIGLVPGVIGGGIIGGMAANHMPEAYLRVLFSAVLIWPGIR 240



 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 7/125 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++  +  L+G  SG+ GVGGG +MVP +               H A GTSL  +     
Sbjct: 131 VILPASGTLAGFASGMMGVGGGTIMVPAMVLCLGF-------TQHAANGTSLAAMVVAGS 183

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +    H R   +    L   +  +    ++  +  +H+ +++L   F+   +  GI  LK
Sbjct: 184 VGAWTHFRLNNVQTGHLIGLVPGVIGGGIIGGMAANHMPEAYLRVLFSAVLIWPGIRNLK 243

Query: 144 RDRLY 148
            +   
Sbjct: 244 ANPPR 248



 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 34/100 (34%), Gaps = 12/100 (12%)

Query: 179 IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
           I   L++ F   + ++A  TS            +    +G             V++ A  
Sbjct: 23  IMIPLMVDFLKMTQHRAHGTSLVAVVFTGLAGAVTYFQNGS------------VDLTAAG 70

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           I+   +I  T +  + ++ + +  L   F   +   S + 
Sbjct: 71  ILATAAIFTTRIGARFAHALPEWKLKRSFGAFLLFVSAMM 110


>gi|315281248|ref|ZP_07869919.1| integral membrane protein, putative [Listeria marthii FSL S4-120]
 gi|313615105|gb|EFR88579.1| integral membrane protein, putative [Listeria marthii FSL S4-120]
          Length = 246

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 121/255 (47%), Gaps = 24/255 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I    + +  +  +    G+GGG++++P+L     LMG+        +  T   +   T 
Sbjct: 3   IITYFLIALGTSVVGSFLGIGGGVILLPILL----LMGVSQGTAAFSSALTVFTMAIFT- 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA-IFCLLMGILM 141
             S    R+ G + + +          TT + +++   + ++     +  +  +L+G+++
Sbjct: 58  -CSIYYKRKQGNVGLAL--KIAVTSIPTTFLGAMVNQMLPEAAYRFLYGALIVVLLGVMI 114

Query: 142 LKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATAT 198
            K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +   A+AT
Sbjct: 115 WKKKRHNEKPHFLSEYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQKTASAT 174

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+ V+ L +  ++      G        +S+G       + ++P +I+   + T+L+ ++
Sbjct: 175 SSYVTLLTSLASIGSYALIGGS-----DFSIG-------IYMIPGAIIGALIGTRLNKLL 222

Query: 259 GKKYLTIGFSMIMFT 273
            +K++ I F++++  
Sbjct: 223 DEKWIAILFNILLVA 237



 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
              + +Y  +  V   + G L+GLFG+GGG +++P+L   F L           A  TS 
Sbjct: 124 PHFLSEYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLN-------QKTASATSS 176

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            V   TS+ S   +   G  +  I    I    I  ++ + +   +D+ ++   F I  +
Sbjct: 177 YVTLLTSLASIGSYALIGGSDFSIGIYMIPGAIIGALIGTRLNKLLDEKWIAILFNILLV 236

Query: 136 LMGILMLKR 144
            +  L L +
Sbjct: 237 ALFALNLIK 245


>gi|238018311|ref|ZP_04598737.1| hypothetical protein VEIDISOL_00135 [Veillonella dispar ATCC 17748]
 gi|237864782|gb|EEP66072.1| hypothetical protein VEIDISOL_00135 [Veillonella dispar ATCC 17748]
          Length = 264

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 95/271 (35%), Gaps = 28/271 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D ++ +     +  FL+  L  + G GGGLV VP+    F            + +GTSL 
Sbjct: 3   DNIIVFYIFFTIVGFLAAMLGTIIGAGGGLVFVPLFMYWF------PEWSPSMIVGTSLF 56

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   +V   + + +   +++     +        ++ + M           AF  F L 
Sbjct: 57  SVMCNAVSGSIAYIKQKKVHISAAIVFSLSTLPGAILGAQMSGWFSGQGFMFAFGCFMLC 116

Query: 137 MGILMLKRDRLYCERKFP---------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
              L+  ++    ERK              +        GF+S   G+GGG+     +++
Sbjct: 117 ASGLIGFKNFKKGERKEESLTLDQLTYSKPIGISISFFVGFISSIFGIGGGLIHVPALIY 176

Query: 188 Y-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
             G   + ATATS  + A+     ++  +           +S+        +     ++ 
Sbjct: 177 LMGFPTHMATATSQSILAVSTMIGVITHLI-----ENHIVFSI-------AIPTSIGAVF 224

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                 +++  +  K +    S+ +F  +  
Sbjct: 225 GAQAGARIAKRLKAKSILALMSVAVFALAVR 255



 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 7/136 (5%)

Query: 12  VFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
             L+ D +     + I  SF  G +S +FG+GGGL+ VP L               H+A 
Sbjct: 134 ESLTLDQLTYSKPIGISISFFVGFISSIFGIGGGLIHVPALIYLMGF-------PTHMAT 186

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
            TS  ++A ++++  + H     I   I               + +   +    +    +
Sbjct: 187 ATSQSILAVSTMIGVITHLIENHIVFSIAIPTSIGAVFGAQAGARIAKRLKAKSILALMS 246

Query: 132 IFCLLMGILMLKRDRL 147
           +    + + ++ +  +
Sbjct: 247 VAVFALAVRLILKSGI 262


>gi|330684914|gb|EGG96596.1| putative membrane protein [Staphylococcus epidermidis VCU121]
          Length = 275

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 93/249 (37%), Gaps = 33/249 (13%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L        I   I   +A+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTLVYLGVDHSILHGITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            +++ S +  ++     N  F IF + + IL++ R ++   + F                
Sbjct: 92  GSLIGSFLSQYLTLKSFNLYFGIFMIFVAILLMVRHKIKPFKIFNKPKYEKTYIDAEGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                   V ++  ++ G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YHYSVPPLVAFVATLLIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            + +  I              G V     ++++  S +   +  K+++ I    + +   
Sbjct: 212 MSSIGHIIQ------------GHVAWDYSIVLIISSYIGAKIGVKVNHSIKSDTVVMLLR 259

Query: 269 MIMFTTSFV 277
            +M      
Sbjct: 260 TVMLLIGAY 268



 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 7/122 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  VA+ L G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SV
Sbjct: 159 LVAFVATLLIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSV 211

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           MS + H   G +        I    I   +   +   +    +        LL+G  ++ 
Sbjct: 212 MSSIGHIIQGHVAWDYSIVLIISSYIGAKIGVKVNHSIKSDTVVMLLRTVMLLIGAYLII 271

Query: 144 RD 145
           + 
Sbjct: 272 KS 273


>gi|301155041|emb|CBW14504.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 264

 Score = 87.8 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 99/253 (39%), Gaps = 12/253 (4%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             ++  +S +FG+GGG++MVP+L   F          + +   TSL ++  +S ++ +  
Sbjct: 13  GVMTNIMSAIFGIGGGVLMVPILYTLF------PQFPLQMIAATSLTIVMGSSFINLIYF 66

Query: 90  RRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
            +   +IN K +  W   + I   +   +  +V    +   F I   L+ I  +      
Sbjct: 67  YKQKVSINYKAMLIWSVGMIIGVQLGFELSFYVPDIAIISVFVITLSLLAIRTIFSKESA 126

Query: 149 CERKFPDNYVKYIWG--MVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSAL 205
             ++   +      G     GF++G  G+GGG     L+        ++    +  +  +
Sbjct: 127 TSQQTTTDETIKGMGLSTFGGFIAGMTGIGGGSIMAPLIGQLKSVKAHQIAPYTNAMMFI 186

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
               +L   +           W +G+VN   V+I++  + +   L+ K+   +  + +  
Sbjct: 187 GGLGSLYGYLSK--NSPHHFGWQIGYVNFSIVIIVVLSAFVTGFLSMKIRGKLSPQLVKK 244

Query: 266 GFSMIMFTTSFVF 278
              +I+   S   
Sbjct: 245 LLGIILLMISAYM 257


>gi|116754715|ref|YP_843833.1| hypothetical protein Mthe_1418 [Methanosaeta thermophila PT]
 gi|116666166|gb|ABK15193.1| protein of unknown function DUF81 [Methanosaeta thermophila PT]
          Length = 300

 Score = 87.8 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 98/264 (37%), Gaps = 28/264 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+I     +G L GL G GG  +M+PV+                +A+GT++  +  T++
Sbjct: 46  ILLIAVGLAAGFLGGLIGTGGCSIMLPVIHFWM-------GYSAPIAIGTTIFAVIFTAI 98

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK--SFLNKAFAIFCLLMGILM 141
                H     ++ +          +  +  S + + + +    L     +  LL  I M
Sbjct: 99  SGGYGHLIRKNLDRRATLWLAGGGILGVIFGSWLFTILVEHIDLLQLILGLAFLLPAIRM 158

Query: 142 LK------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYK 194
           +       + +   +     +    ++G   G L+G +G+GGG      +++ +GA +Y 
Sbjct: 159 IYEGIGRSKPKQEGDTIPGGSSGFAVFGFAIGVLTGIVGLGGGYALVPGLIYLFGAPVYI 218

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
              TS  V   +A  A  +++              GFV +   LI+   +I+   +   +
Sbjct: 219 TMGTSLAVMIPMAVVAGGIKLVQ------------GFVALTTALILAAGTIVGAQIGAAV 266

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
                   L + F +     S  F
Sbjct: 267 IKRFRPNTLKLIFGIYFLYVSLKF 290



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 7/117 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             V  F  G L+G+ G+GGG  +VP L   F          +++ MGTSL V+ P +V++
Sbjct: 182 FAVFGFAIGVLTGIVGLGGGYALVPGLIYLFGA-------PVYITMGTSLAVMIPMAVVA 234

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                  G + +           +   + + +I     + L   F I+ L + +  +
Sbjct: 235 GGIKLVQGFVALTTALILAAGTIVGAQIGAAVIKRFRPNTLKLIFGIYFLYVSLKFI 291


>gi|308270980|emb|CBX27590.1| hypothetical protein N47_H24120 [uncultured Desulfobacterium sp.]
          Length = 275

 Score = 87.8 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 98/277 (35%), Gaps = 41/277 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I      G    L G GGG V++PVL   +     +    +      SL ++   ++  
Sbjct: 9   FICLGVAVGCYGTLIGAGGGFVLMPVLLLLYPNQNANLLTSI------SLAIVFFNALSG 62

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +     I+ +    +        V+ +L  ++V +   +  FAI  L+  + +  R 
Sbjct: 63  TEAYSLMKRIDYRSGLMFSLATIPGAVLGALNTAYVPRRLFDFIFAILLLVGAVFLALRP 122

Query: 146 RLYCERKFP------------------------DNYVKYIWGMVTGFLSGALGVGGGIFT 181
           R     +                          +  +  +  ++ G++S  LG+GGGI  
Sbjct: 123 REVENNRISISKGRNRSMRILVDSHGKKYEYNFNWPLGMMISVIVGYVSSFLGIGGGIIH 182

Query: 182 NLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
              + +     I+ ATATS  V A++A    +V I +G    G          +  ++ +
Sbjct: 183 VPALCYLLNFPIHIATATSHFVLAIMALTGTIVHIITGAFTQG----------VHQIIAL 232

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               ++   +  +LS  +   ++    +M +      
Sbjct: 233 AIGVVIGAQIGARLSEKVQGSWIIRSLAMALGVVGLR 269



 Score = 49.3 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 53/121 (43%), Gaps = 9/121 (7%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L ++ S + G +S   G+GGG++ VP L              +H+A  TS  V+A  ++ 
Sbjct: 159 LGMMISVIVGYVSSFLGIGGGIIHVPALCYLLNF-------PIHIATATSHFVLAIMALT 211

Query: 85  SFMEHRRHGTINMKI--LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + H   G     +  +      + I   + + +   V  S++ ++ A+   ++G+ +L
Sbjct: 212 GTIVHIITGAFTQGVHQIIALAIGVVIGAQIGARLSEKVQGSWIIRSLAMALGVVGLRIL 271

Query: 143 K 143
            
Sbjct: 272 F 272


>gi|304436989|ref|ZP_07396952.1| hconserved hypothetical protein [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304369940|gb|EFM23602.1| hconserved hypothetical protein [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 265

 Score = 87.8 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 92/255 (36%), Gaps = 22/255 (8%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM-GTSLGVIAPTSVMSFMEHRR 91
            GT   L G+GGGL+ VP+        GI         + GTSL ++   ++     + R
Sbjct: 15  VGTFGTLVGIGGGLICVPIFIFFLSDGGIYPYFHTAAQITGTSLVIVCANALSGTFAYIR 74

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML---KRDRLY 148
              +       +         + S ++       L  ++  F LLM ++M       +  
Sbjct: 75  QKRVYFAAAVPFALATLPGAFLGSYIVDDFTGPMLYISYGSFLLLMALMMYWNAMNKKHA 134

Query: 149 CERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGV 202
                P     +  +        GF+S   G+GGG+    LM++  G  ++ ATATS  V
Sbjct: 135 DVHTLPADFTFNRSLGVGASAGVGFISSIFGIGGGVIHVPLMVYLLGFPVHVATATSHFV 194

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
            A  A   ++  ++            LG V     + I   + +   +   LS     K 
Sbjct: 195 LACSATFGVISHVW------------LGHVIWTPAICISIGAAIGAQIGAALSKKTKSKV 242

Query: 263 LTIGFSMIMFTTSFV 277
           + +  ++ MF     
Sbjct: 243 ILVLLALAMFGLGLR 257



 Score = 43.1 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L + AS   G +S +FG+GGG++ VP++              +HVA  TS  V+A ++  
Sbjct: 149 LGVGASAGVGFISSIFGIGGGVIHVPLMVYLLGF-------PVHVATATSHFVLACSATF 201

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + H   G +             I   + + +        +    A+    +G+ ++
Sbjct: 202 GVISHVWLGHVIWTPAICISIGAAIGAQIGAALSKKTKSKVILVLLALAMFGLGLRLI 259


>gi|194017556|ref|ZP_03056167.1| YrkJ [Bacillus pumilus ATCC 7061]
 gi|194010828|gb|EDW20399.1| YrkJ [Bacillus pumilus ATCC 7061]
          Length = 258

 Score = 87.8 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 107/261 (40%), Gaps = 18/261 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++  + +   +   LSG+ G+GG ++  P+L     L+G+  ++  H   G     +  +
Sbjct: 5   FLITLFIIGCIGSFLSGMVGIGGSVINYPMLLYIPPLVGV-MALSAHEVSGIGAIQVLFS 63

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++   + +R+ G ++  ++      +   +++ S +   + ++ +N  + +  ++  ILM
Sbjct: 64  TLGGVLAYRKSGFLHRTLIIYMGISILAGSLLGSYVSHFMPENGMNLVYGLLAIVAVILM 123

Query: 142 LKRDRLYCERK----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
           L   +               +      V G +SG LG GG      +ML      +    
Sbjct: 124 LIPKKGQRADAEGEVTFHKGLAAGIAFVIGSVSGVLGAGGAFILVPVMLSILKIPVRMTI 183

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A+S  ++ L A  A   +I +G             V +   ++++  S++  P+  K+  
Sbjct: 184 ASSLAITFLSAIGASTGKILTGQ------------VMLLPAVVLMLASLIAAPIGAKVGQ 231

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            I   YL    ++++  T+  
Sbjct: 232 KINAVYLQWALAVMITATAVK 252



 Score = 43.1 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L    +F+ G++SG+ G GG  ++VPV+    +       I + + + +SL +   +++ 
Sbjct: 144 LAAGIAFVIGSVSGVLGAGGAFILVPVMLSILK-------IPVRMTIASSLAITFLSAIG 196

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +       G + +      +    I   + + +   ++  +L  A A+      + +   
Sbjct: 197 ASTGKILTGQVMLLPAVVLMLASLIAAPIGAKVGQKINAVYLQWALAVMITATAVKIWLD 256


>gi|304406370|ref|ZP_07388026.1| protein of unknown function DUF81 [Paenibacillus curdlanolyticus
           YK9]
 gi|304344428|gb|EFM10266.1| protein of unknown function DUF81 [Paenibacillus curdlanolyticus
           YK9]
          Length = 273

 Score = 87.8 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 60/273 (21%), Positives = 107/273 (39%), Gaps = 32/273 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L+ +   +S     + G+GGG+++VP L+     + +   I    A+GTSL V+  T+
Sbjct: 4   IVLLALLGLISAIFGSIVGLGGGIIIVPALTLLGPQL-VGSEIDHATAVGTSLAVLIVTA 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S M + +   ++ +             ++ S +  H+       +F IF LLM  L++
Sbjct: 63  LASTMAYSKKKRVDWRSGWLLFMTSGPAAMIGSALTGHMSNGPFQLSFGIFMLLMAGLLV 122

Query: 143 KRDRLYC-ERKFP-----------------DNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
            RD +    R++P                       + G   G +SG  G+GGG     +
Sbjct: 123 ARDYMKPISRQWPVVRTYTDDKGEQHHYGYAVLPALLVGFAVGLISGLFGIGGGSLFVPV 182

Query: 185 M-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           M L +    + ATATS     +I   + L      W         LG  N   VL++ P 
Sbjct: 183 MVLLFRFPPHVATATS---MFVIFLSSTLGTGVHAW---------LGETNWWIVLVLAPG 230

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           + L       ++  +  K L     + +   + 
Sbjct: 231 AWLGGKAGAWIASRMTGKALLWVLRITLVLMAA 263



 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 7/116 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++  F  G +SGLFG+GGG + VPV+   F+          HVA  TS+ VI  +S +  
Sbjct: 158 LLVGFAVGLISGLFGIGGGSLFVPVMVLLFRF-------PPHVATATSMFVIFLSSTLGT 210

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             H   G  N  I+        +     + + S +    L     I  +LM   ++
Sbjct: 211 GVHAWLGETNWWIVLVLAPGAWLGGKAGAWIASRMTGKALLWVLRITLVLMAAQLI 266


>gi|154489152|ref|ZP_02030001.1| hypothetical protein BIFADO_02467 [Bifidobacterium adolescentis
           L2-32]
 gi|154083289|gb|EDN82334.1| hypothetical protein BIFADO_02467 [Bifidobacterium adolescentis
           L2-32]
          Length = 292

 Score = 87.8 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 94/253 (37%), Gaps = 24/253 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++IV   L G LSG FG+GGG ++VP L            +    A  TS+  I PTS
Sbjct: 37  IIVLIVVGMLVGVLSGTFGIGGGTMIVPALVWL--------GLSQRNAAATSMLAIVPTS 88

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-- 140
           +   + +   G ++          + I   + S ++S + +  L   F  F + + I   
Sbjct: 89  ISGVISYATGGHVDWLAAALLFCGMFIGGQIGSWLLSRLPELVLRWIFVAFLVFVVINQV 148

Query: 141 -MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
             +                  + G+V G L+G LG+GGG      +   +GAS   A  T
Sbjct: 149 SFVPSRDHQIVMTVVTGIGLALLGVVIGTLAGLLGIGGGALAVPSLSMLFGASDLVARGT 208

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S       +       +                 ++   LII   + +  PL T ++  +
Sbjct: 209 SLLAMFPNSITTSAANLKRRLA------------HVKTALIIGVTAAVTAPLGTWIAGEV 256

Query: 259 GKKYLTIGFSMIM 271
             +   I F+  +
Sbjct: 257 SPRVGAIMFACYL 269



 Score = 62.0 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 12/117 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           V  + GM+ G LSG  G+GGG      +++ G S   A ATS       +   ++     
Sbjct: 39  VLIVVGMLVGVLSGTFGIGGGTMIVPALVWLGLSQRNAAATSMLAIVPTSISGVISYATG 98

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                       G V+  A  ++     +   + + L   + +  L   F   +   
Sbjct: 99  ------------GHVDWLAAALLFCGMFIGGQIGSWLLSRLPELVLRWIFVAFLVFV 143



 Score = 35.8 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 35/95 (36%), Gaps = 7/95 (7%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP LS  F    +       VA GTSL  + P S+ +   + +    ++K          
Sbjct: 191 VPSLSMLFGASDL-------VARGTSLLAMFPNSITTSAANLKRRLAHVKTALIIGVTAA 243

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +T  + + +   V        FA +  ++ +  + 
Sbjct: 244 VTAPLGTWIAGEVSPRVGAIMFACYLCVLLVRSVF 278


>gi|157690992|ref|YP_001485454.1| hypothetical protein BPUM_0195 [Bacillus pumilus SAFR-032]
 gi|157679750|gb|ABV60894.1| hypothetical membrane protein [Bacillus pumilus SAFR-032]
          Length = 258

 Score = 87.8 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 107/261 (40%), Gaps = 18/261 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++  + +   +   LSG+ G+GG ++  P+L     L+G+  ++  H   G     +  +
Sbjct: 5   FLITLFIIGCIGSFLSGMVGIGGSVINYPMLLYIPPLVGV-MALSAHEVSGIGAIQVLFS 63

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++   + +R+ G ++  ++      +   +++ S +   + ++ +N  + +  ++  +LM
Sbjct: 64  TLGGVLAYRKSGFLHRSLILYMGSSILAGSLLGSYVSHFMPENGMNLVYGLLAIVAVVLM 123

Query: 142 LKRDRLYCERKFPD----NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
           L   +        +      +      V G +SG LG GG      +ML      +    
Sbjct: 124 LIPKKGQRADAEEEVTFHKGLAAGIAFVIGSVSGVLGAGGAFILVPVMLSILKIPVRMTI 183

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A+S  ++ L A  A   ++ +G             V +   ++++  S++  P+  K+  
Sbjct: 184 ASSLAITFLSAIGASAGKVLTGQ------------VMLLPAVVLMLASLIAAPIGAKVGQ 231

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            I   YL    + ++  T+  
Sbjct: 232 KINAVYLQWALAAMITATAVK 252



 Score = 43.9 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 53/130 (40%), Gaps = 7/130 (5%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           +++ V  +  L    +F+ G++SG+ G GG  ++VPV+    +       I + + + +S
Sbjct: 134 AEEEVTFHKGLAAGIAFVIGSVSGVLGAGGAFILVPVMLSILK-------IPVRMTIASS 186

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           L +   +++ +       G + +      +    I   + + +   ++  +L  A A   
Sbjct: 187 LAITFLSAIGASAGKVLTGQVMLLPAVVLMLASLIAAPIGAKVGQKINAVYLQWALAAMI 246

Query: 135 LLMGILMLKR 144
               + +   
Sbjct: 247 TATAVKIWLD 256


>gi|117925545|ref|YP_866162.1| hypothetical protein Mmc1_2255 [Magnetococcus sp. MC-1]
 gi|117609301|gb|ABK44756.1| protein of unknown function DUF81 [Magnetococcus sp. MC-1]
          Length = 671

 Score = 87.4 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 85/213 (39%), Gaps = 22/213 (10%)

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + ++R GTI+   L+  I  +    V    + + +D   +     +F + +GI M+ 
Sbjct: 460 AAALRYKRSGTIHWPALQPLIPWVIGGVVAGYFIGNVLDAFVIRMLLGLFAVALGIKMVL 519

Query: 144 ---------------RDRLYCERKFPDNYVK--YIWGMVTGFLSGALGVGGGIFTNLLML 186
                          RD L+  R   +N      + G+  G +SG LG+ GG+    L  
Sbjct: 520 EIWEHHRHGIDREAERDHLFQNRAHIENRWMREGVLGLPMGLISGILGITGGVVEVPLQR 579

Query: 187 FY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           +  G  +  A + SA +    +     V ++ G         +     +   LI+LP S 
Sbjct: 580 YVNGVPMRMAISNSAVLVFFASIVGSAVAMWHGITSGAFEAET----PLIMALILLPGSY 635

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L   +   L+ ++   +L   ++++MF  SF  
Sbjct: 636 LGGMIGAWLTTVVPMDFLRWLYAILMFAVSFRM 668



 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 15/123 (12%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V     G +SG+ G+ GG+V VP+           + + M +A+  S  ++   S++   
Sbjct: 554 VLGLPMGLISGILGITGGVVEVPLQRYV-------NGVPMRMAISNSAVLVFFASIVGSA 606

Query: 88  EHRRHG--------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
               HG           + +    +    +  ++ + + + V   FL   +AI    +  
Sbjct: 607 VAMWHGITSGAFEAETPLIMALILLPGSYLGGMIGAWLTTVVPMDFLRWLYAILMFAVSF 666

Query: 140 LML 142
            M 
Sbjct: 667 RMF 669


>gi|294085678|ref|YP_003552438.1| hypothetical protein SAR116_2111 [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292665253|gb|ADE40354.1| hypothetical protein SAR116_2111 [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 257

 Score = 87.4 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 94/260 (36%), Gaps = 22/260 (8%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++    + +   FL+G L G  G+G G+V+VP+L            + + +A+  ++  
Sbjct: 6   TLLAAFTMYLGCGFLAGALIGCIGIG-GVVLVPLLVYF-------GGVDIKLAISAAMFA 57

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
              + ++    + +  +I   +            ++ S +++ +D  FL     +  +L 
Sbjct: 58  YIVSGLVGTYIYAQSKSIQWSMALILFIGAAPGALLGSWLVAVIDGDFLKALIGVLAILS 117

Query: 138 GILMLKRDRLYCERKFP--DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           G+  L+          P          G +TG LS   G GG +    L+++    I  A
Sbjct: 118 GVQTLRGGVKTDHGDTPSLGATPLIGIGAITGVLSSLTGTGGPLVLVPLLMWLRLPILLA 177

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
              S  +   IA  A    + +            G  +    + +       + +  K++
Sbjct: 178 IGLSQAIQLPIATFATAANLMA------------GNFSWVIAISLAMGISTGSLIGAKVA 225

Query: 256 YMIGKKYLTIGFSMIMFTTS 275
           + +    L I  ++++    
Sbjct: 226 HRLPTATLKIIVAVVLTLVG 245



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 48/119 (40%), Gaps = 8/119 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I    ++G LS L G GG LV+VP+L            + + +A+G S  +  P +  +
Sbjct: 141 LIGIGAITGVLSSLTGTGGPLVLVPLLMWL--------RLPILLAIGLSQAIQLPIATFA 192

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              +   G  +  I       +   +++ + +   +  + L    A+   L+G  +   
Sbjct: 193 TAANLMAGNFSWVIAISLAMGISTGSLIGAKVAHRLPTATLKIIVAVVLTLVGGFLFID 251


>gi|323443784|gb|EGB01396.1| hypothetical protein SAO46_0207 [Staphylococcus aureus O46]
          Length = 275

 Score = 87.4 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 92/249 (36%), Gaps = 33/249 (13%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P +       G+  +I   +A+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTMVYLGVEHGLLHNITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            +++ S +  ++     N  F IF + + IL++ R+++   + F                
Sbjct: 92  GSLLGSFISRYLTFELFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                     +I   + G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YHYSVPPLFAFITTFLIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            + +  I              G V  G  +I++  S     +  K++  I    +     
Sbjct: 212 MSSIGHIAQ------------GHVAWGYAIILIISSYFGAKIGVKVNQSIKSDTVVTLLR 259

Query: 269 MIMFTTSFV 277
            +M      
Sbjct: 260 TVMLLMGIY 268


>gi|116872011|ref|YP_848792.1| integral membrane protein, putative [Listeria welshimeri serovar 6b
           str. SLCC5334]
 gi|116740889|emb|CAK20009.1| integral membrane protein, putative [Listeria welshimeri serovar 6b
           str. SLCC5334]
          Length = 246

 Score = 87.4 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 116/255 (45%), Gaps = 24/255 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I    + +  +  +    G+GGG++++P+L     LMGI        +  T   +   T 
Sbjct: 3   IITYFLIALSTSVVGSFLGIGGGVILLPILL----LMGISQGTAAFSSALTVFTMAIFT- 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S    R+ G + + +          TT + +++   + +S     +    + + +LM 
Sbjct: 58  -CSIYYKRKQGNVVLAL--KIAVTSIPTTFLGAMVNQMLPESVYRFMYGALIVTLLLLMF 114

Query: 143 KRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATAT 198
            + +   E+         + Y++G++ GFL+G  G+GGG I   +L+L +  +   A+AT
Sbjct: 115 WKKKRNNEKPHFLSKYRIMPYLFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQKTASAT 174

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+ V+ L +  ++      G        +S+G       + ++P +IL   + T+L+ ++
Sbjct: 175 SSYVTLLTSMASIGSYAIIGGS-----DFSIG-------IYMIPGAILGALIGTRLNKLL 222

Query: 259 GKKYLTIGFSMIMFT 273
            +K++ I F++++  
Sbjct: 223 DEKWIAILFNILLVA 237



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +   + G L+GLFG+GGG +++P+L   F L           A  TS  V   TS+ S  
Sbjct: 136 LFGVIIGFLAGLFGIGGGPIVIPILLLIFMLN-------QKTASATSSYVTLLTSMASIG 188

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +   G  +  I    I    +  ++ + +   +D+ ++   F I  + +  L L +
Sbjct: 189 SYAIIGGSDFSIGIYMIPGAILGALIGTRLNKLLDEKWIAILFNILLVALFALNLIK 245


>gi|238927134|ref|ZP_04658894.1| membrane protein [Selenomonas flueggei ATCC 43531]
 gi|238885114|gb|EEQ48752.1| membrane protein [Selenomonas flueggei ATCC 43531]
          Length = 265

 Score = 87.4 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 92/255 (36%), Gaps = 22/255 (8%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM-GTSLGVIAPTSVMSFMEHRR 91
            GT   L G+GGGL+ VP+        GI         + GTSL ++   ++     + R
Sbjct: 15  VGTFGTLVGIGGGLICVPIFIFFLSDGGIYPYFHTAAQITGTSLVIVCANALSGTFAYIR 74

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR---DRLY 148
              +       +         + S ++       L  ++  F LLM ++M       +  
Sbjct: 75  QKRVYFAAAVPFALATLPGAFLGSYIVDDFTGPMLYISYGSFLLLMALMMYWNATHKKHA 134

Query: 149 CERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGV 202
                P     +  +        GF+S   G+GGG+    LM++  G  ++ ATATS  V
Sbjct: 135 DVHTLPADFTFNRSLGVGASAGVGFISSIFGIGGGVIHVPLMVYLLGFPVHVATATSHFV 194

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
            A  A   ++  ++            LG V     + I   + +   +   LS     K 
Sbjct: 195 LACSATFGVISHVW------------LGHVIWTPAICISIGAAIGAQIGAALSQKTKSKV 242

Query: 263 LTIGFSMIMFTTSFV 277
           + +  ++ MF     
Sbjct: 243 ILVLLALAMFGLGLR 257



 Score = 43.1 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L + AS   G +S +FG+GGG++ VP++              +HVA  TS  V+A ++  
Sbjct: 149 LGVGASAGVGFISSIFGIGGGVIHVPLMVYLLGF-------PVHVATATSHFVLACSATF 201

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + H   G +             I   + + +        +    A+    +G+ ++
Sbjct: 202 GVISHVWLGHVIWTPAICISIGAAIGAQIGAALSQKTKSKVILVLLALAMFGLGLRLI 259


>gi|15923912|ref|NP_371446.1| hypothetical protein SAV0922 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926511|ref|NP_374044.1| hypothetical protein SA0783 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21282534|ref|NP_645622.1| hypothetical protein MW0805 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49485699|ref|YP_042920.1| hypothetical protein SAS0793 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57651614|ref|YP_185795.1| hypothetical protein SACOL0925 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87159978|ref|YP_493527.1| hypothetical protein SAUSA300_0827 [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88194616|ref|YP_499412.1| hypothetical protein SAOUHSC_00859 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148267355|ref|YP_001246298.1| hypothetical protein SaurJH9_0921 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150393408|ref|YP_001316083.1| hypothetical protein SaurJH1_0940 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|151221006|ref|YP_001331828.1| hypothetical protein NWMN_0794 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156979248|ref|YP_001441507.1| hypothetical protein SAHV_0917 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161509124|ref|YP_001574783.1| hypothetical protein USA300HOU_0883 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221141914|ref|ZP_03566407.1| hypothetical protein SauraJ_09825 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253316401|ref|ZP_04839614.1| hypothetical protein SauraC_09706 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|255005712|ref|ZP_05144313.2| hypothetical protein SauraM_04565 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257795388|ref|ZP_05644367.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|258418099|ref|ZP_05682364.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|258422102|ref|ZP_05685016.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|258431488|ref|ZP_05688573.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|258443518|ref|ZP_05691859.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|258445709|ref|ZP_05693886.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|258450099|ref|ZP_05698195.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|258452125|ref|ZP_05700141.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|258453855|ref|ZP_05701827.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|262049617|ref|ZP_06022485.1| hypothetical protein SAD30_1200 [Staphylococcus aureus D30]
 gi|269202537|ref|YP_003281806.1| hypothetical protein SAAV_0883 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282894729|ref|ZP_06302956.1| hypothetical protein SGAG_02076 [Staphylococcus aureus A8117]
 gi|282922202|ref|ZP_06329897.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|282929120|ref|ZP_06336701.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|284023850|ref|ZP_06378248.1| hypothetical protein Saura13_04644 [Staphylococcus aureus subsp.
           aureus 132]
 gi|294850197|ref|ZP_06790933.1| hypothetical protein SKAG_02288 [Staphylococcus aureus A9754]
 gi|295407687|ref|ZP_06817475.1| hypothetical protein SMAG_02857 [Staphylococcus aureus A8819]
 gi|296277145|ref|ZP_06859652.1| hypothetical protein SauraMR_12391 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297208442|ref|ZP_06924872.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|297246707|ref|ZP_06930528.1| hypothetical protein SLAG_02763 [Staphylococcus aureus A8796]
 gi|300912518|ref|ZP_07129961.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304381524|ref|ZP_07364174.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|13700725|dbj|BAB42022.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246691|dbj|BAB57084.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|21203971|dbj|BAB94670.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49244142|emb|CAG42568.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57285800|gb|AAW37894.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           COL]
 gi|87125952|gb|ABD20466.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202174|gb|ABD29984.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147740424|gb|ABQ48722.1| protein of unknown function DUF81 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149945860|gb|ABR51796.1| protein of unknown function DUF81 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|150373806|dbj|BAF67066.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156721383|dbj|BAF77800.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160367933|gb|ABX28904.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257789360|gb|EEV27700.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|257838892|gb|EEV63371.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|257841915|gb|EEV66350.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|257849387|gb|EEV73359.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|257851302|gb|EEV75243.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|257855285|gb|EEV78223.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|257856639|gb|EEV79544.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|257860340|gb|EEV83172.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|257863720|gb|EEV86476.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|259162259|gb|EEW46833.1| hypothetical protein SAD30_1200 [Staphylococcus aureus D30]
 gi|262074827|gb|ACY10800.1| hypothetical protein SAAV_0883 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269940425|emb|CBI48802.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282589312|gb|EFB94406.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|282593492|gb|EFB98486.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|282763006|gb|EFC03139.1| hypothetical protein SGAG_02076 [Staphylococcus aureus A8117]
 gi|283470122|emb|CAQ49333.1| conserved protein YunE [Staphylococcus aureus subsp. aureus ST398]
 gi|285816601|gb|ADC37088.1| hypothetical protein SA2981_0877 [Staphylococcus aureus 04-02981]
 gi|294822971|gb|EFG39404.1| hypothetical protein SKAG_02288 [Staphylococcus aureus A9754]
 gi|294967456|gb|EFG43497.1| hypothetical protein SMAG_02857 [Staphylococcus aureus A8819]
 gi|296887181|gb|EFH26084.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|297176423|gb|EFH35693.1| hypothetical protein SLAG_02763 [Staphylococcus aureus A8796]
 gi|300886764|gb|EFK81966.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302750751|gb|ADL64928.1| sulfite exporter TauE/SafE-like protein [Staphylococcus aureus
           subsp. aureus str. JKD6008]
 gi|304339887|gb|EFM05831.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|312829319|emb|CBX34161.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315128396|gb|EFT84406.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315197275|gb|EFU27613.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320141260|gb|EFW33107.1| hypothetical protein HMPREF9528_00880 [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320143032|gb|EFW34823.1| hypothetical protein HMPREF9529_01552 [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|329313590|gb|AEB88003.1| Sulfite exporter TauE/SafE-like protein [Staphylococcus aureus
           subsp. aureus T0131]
 gi|329724617|gb|EGG61124.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           21172]
 gi|329726221|gb|EGG62691.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           21189]
 gi|329733911|gb|EGG70233.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           21193]
          Length = 275

 Score = 87.4 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 92/249 (36%), Gaps = 33/249 (13%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P +       G+  +I   VA+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTMVYLGVEHGLLHNITTQVAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            +++ S +  ++     N  F IF + + IL++ R+++   + F                
Sbjct: 92  GSLLGSFISRYLTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                     +I   + G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YHYSVPPLFAFITTFLIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            + +  I              G V  G  +I++  S     +  K++  I    +     
Sbjct: 212 MSSIGHIAQ------------GHVAWGYAIILIISSYFGAKIGVKVNQSIKSDTVVTLLR 259

Query: 269 MIMFTTSFV 277
            +M      
Sbjct: 260 TVMLLMGIY 268


>gi|229177305|ref|ZP_04304689.1| hypothetical protein bcere0005_6770 [Bacillus cereus 172560W]
 gi|228606184|gb|EEK63621.1| hypothetical protein bcere0005_6770 [Bacillus cereus 172560W]
          Length = 254

 Score = 87.4 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 100/260 (38%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFS-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + + +  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKTLVVYMGASILIGSFIGSFGANVLAEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    +        + ++  +   V G  SG +G GG      +ML      +    AT
Sbjct: 120 MMFVPKQNNSGDVKYNKWLASLLAFVVGGASGIIGAGGSFLLVPIMLVILKLPLRMTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V I A++ I   SI   PL  ++   +
Sbjct: 180 SIAITFISSIGITTGKMVTGQV-----------VIIPALI-IAVASIFAAPLGARVGKRL 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S ++  T+   
Sbjct: 228 NQKVLQYVLSTLIVGTAVKM 247


>gi|108757215|ref|YP_628460.1| membrane protein [Myxococcus xanthus DK 1622]
 gi|108461095|gb|ABF86280.1| membrane protein [Myxococcus xanthus DK 1622]
          Length = 293

 Score = 87.4 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 85/233 (36%), Gaps = 26/233 (11%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L            +    A+  SL V+  TS  S   H R G +  +    +     
Sbjct: 29  VPLLIYVL-------DVEPRTAIAMSLVVVGVTSASSAFLHARAGRVRWRTALVFGAGGM 81

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR--LYCERKFPDNYVKYIW-GMV 165
               +   +  H+    L   F    +   + ML+R           P    + +  G+ 
Sbjct: 82  GGAFLGGRLNPHLAPDTLLLLFGSVMVAAAVAMLRRREAGPAATSVSPLPAARVLAQGIA 141

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            G LSG +G GGG      +   G  +  ATATS  V AL     L+             
Sbjct: 142 VGALSGLVGAGGGFLIVPALSLAGLPMPVATATSLVVIALQCAAGLVG------------ 189

Query: 226 PWSLGFVNIGAVLI--ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              LG +++  VL   +L  ++  + +  +L+  +    L  GF++ + TT+ 
Sbjct: 190 --HLGHLDLPWVLTGEVLLAAMTGSLVGGRLAGRVSPAMLRKGFAVFVLTTAA 240



 Score = 66.6 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 56/139 (40%), Gaps = 8/139 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++      G LSGL G GGG ++VP LS A         + M VA  TSL VIA      
Sbjct: 135 VLAQGIAVGALSGLVGAGGGFLIVPALSLA--------GLPMPVATATSLVVIALQCAAG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + H  H  +   +  + +      ++V   +   V  + L K FA+F L     +L   
Sbjct: 187 LVGHLGHLDLPWVLTGEVLLAAMTGSLVGGRLAGRVSPAMLRKGFAVFVLTTAAFLLGAQ 246

Query: 146 RLYCERKFPDNYVKYIWGM 164
                R+       ++W +
Sbjct: 247 SPAPLRERVWTEGLWLWSV 265


>gi|82750538|ref|YP_416279.1| hypothetical protein SAB0789 [Staphylococcus aureus RF122]
 gi|82656069|emb|CAI80477.1| probable membrane protein [Staphylococcus aureus RF122]
          Length = 275

 Score = 87.4 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 92/249 (36%), Gaps = 33/249 (13%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       G+  +I   +A+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTLVYLGVEHGLLRNITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            +++ S +  ++     N  F IF + + IL++ R+++   + F                
Sbjct: 92  GSLLGSFISRYLTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                     +I   + G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YHYSVPPLFAFITTFLIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            + +  I              G V  G  +I++  S     +  K++  I    +     
Sbjct: 212 MSSIGHIAQ------------GHVAWGYAIILIISSYFGAKIGVKVNQSIKSDTVVTLLR 259

Query: 269 MIMFTTSFV 277
            +M      
Sbjct: 260 TVMLLMGIY 268


>gi|311107523|ref|YP_003980376.1| hypothetical protein AXYL_04342 [Achromobacter xylosoxidans A8]
 gi|310762212|gb|ADP17661.1| hypothetical protein AXYL_04342 [Achromobacter xylosoxidans A8]
          Length = 270

 Score = 87.4 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 58/266 (21%), Positives = 105/266 (39%), Gaps = 9/266 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSI----CMHVAMGTSLGV 77
              ++ +   LSG  + LFG GGG V+VPVL                  MH+A+ TS  V
Sbjct: 2   LYLILALFGCLSGVTTVLFGFGGGFVVVPVLYAVLTSAHGAHDAIGLAAMHIAVATSTCV 61

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +   S+ +  +H+R G I    +      + +   + +L  +      +  AF  +  + 
Sbjct: 62  MIVNSIAATRKHQRAGNILRAYVWPLAGFIAVGAALGALAATRASGDLVRYAFIAYLGVT 121

Query: 138 GILMLKRDRLYC----ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
            +  L R         + +   + V    G+  G ++  LGVGG + T  L+   G  + 
Sbjct: 122 ILDCLLRQGFMAQGDEQPRPLGHGVLVGGGLAIGVVAAFLGVGGSVMTVPLLRRRGLPMA 181

Query: 194 KATATSAGVSALIAFPALLVRI-YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           KA A +  ++  +A    L  +  +G     L PW +G+V++ A   +   S+    LA 
Sbjct: 182 KAAAMANPLTLPVAVVGTLAYMAAAGGLAAPLAPWVVGYVDLLAFAALALGSLAGIRLAA 241

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVF 278
            L   I        + +++       
Sbjct: 242 PLIPRIPDHLHARVYVLLLALVMLSM 267


>gi|289433897|ref|YP_003463769.1| hypothetical protein lse_0530 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289170141|emb|CBH26681.1| membrane protein, putative [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 246

 Score = 87.4 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 119/255 (46%), Gaps = 24/255 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I    + +  +  +    G+GGG++++P+L     LMGI        +  T   +   T 
Sbjct: 3   IITYFLIALSTSVIGSFLGIGGGVILLPILL----LMGISQGTAAFSSALTVFTMAIFT- 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM- 141
             S    R+ G + + +          TT + +++   + ++     +    +++ +LM 
Sbjct: 58  -CSIYYKRKQGNVGLAL--KIAITSIPTTFIGAIVNQMLPEAVYRFLYGALIVVLILLMV 114

Query: 142 LKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATAT 198
            K  R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +   A+AT
Sbjct: 115 WKNKRNNEQPHFLSKYRIMPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQKTASAT 174

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+ V+ L +F ++      G        +S+G       + ++P +IL   + T+L+ ++
Sbjct: 175 SSYVTLLTSFASIGSYAIIGGS-----DFSIG-------IYMIPGAILGAIIGTRLNKLL 222

Query: 259 GKKYLTIGFSMIMFT 273
            +K++ I F++++  
Sbjct: 223 DEKWIAILFNILLVA 237



 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V   + G L+GLFG+GGG +++P+L   F L           A  TS  V   TS  S  
Sbjct: 136 VFGVIIGFLAGLFGIGGGPIVIPILLLIFMLN-------QKTASATSSYVTLLTSFASIG 188

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +   G  +  I    I    +  ++ + +   +D+ ++   F I  + +  L L +
Sbjct: 189 SYAIIGGSDFSIGIYMIPGAILGAIIGTRLNKLLDEKWIAILFNILLVALFALNLIK 245


>gi|253731529|ref|ZP_04865694.1| protein of hypothetical function DUF81 [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|253724772|gb|EES93501.1| protein of hypothetical function DUF81 [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
          Length = 275

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 92/249 (36%), Gaps = 33/249 (13%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P +       G+  +I   VA+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTMVYLGVEHGLLHNITTQVAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            +++ S +  ++     N  F IF + + IL++ R+++   + F                
Sbjct: 92  GSLLGSFISRYLTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                     +I   + G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YHYSVPPLFAFITTFLIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSI 211

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            + +  I              G V  G  +I++  S     +  K++  I    +     
Sbjct: 212 MSSIGHIAQ------------GHVAWGYAIILIISSYFGAKIGVKVNQSIKSDTVVTLLR 259

Query: 269 MIMFTTSFV 277
            +M      
Sbjct: 260 TVMLLMGIY 268


>gi|229095422|ref|ZP_04226413.1| hypothetical protein bcere0020_6780 [Bacillus cereus Rock3-29]
 gi|228687968|gb|EEL41855.1| hypothetical protein bcere0020_6780 [Bacillus cereus Rock3-29]
          Length = 254

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 101/260 (38%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMIFYIPVLLGFT-GYTAHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   +N  ++      + I + + S   + +++  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNDMNKTLVMYMGASILIGSFIGSFGANILEEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    +        + ++  +   V G  SG +G GG      +ML      +    AT
Sbjct: 120 MMFVPKQNNSGDVKYNKWLASLLAFVVGGASGIIGAGGSFLLVPIMLVILKLPLRMTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V I A++ I   SI   PL  ++   +
Sbjct: 180 SIAITFISSIGITTGKVITGQV-----------VIIPALI-IAVASIFAAPLGARVGKRL 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S ++  T+   
Sbjct: 228 NQKVLQYVLSTLIVGTAVKM 247


>gi|206967540|ref|ZP_03228496.1| putative membrane protein [Bacillus cereus AH1134]
 gi|228951275|ref|ZP_04113386.1| hypothetical protein bthur0006_6970 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|229068457|ref|ZP_04201758.1| hypothetical protein bcere0025_6710 [Bacillus cereus F65185]
 gi|229078083|ref|ZP_04210685.1| hypothetical protein bcere0023_7700 [Bacillus cereus Rock4-2]
 gi|206736460|gb|EDZ53607.1| putative membrane protein [Bacillus cereus AH1134]
 gi|228705227|gb|EEL57611.1| hypothetical protein bcere0023_7700 [Bacillus cereus Rock4-2]
 gi|228714599|gb|EEL66473.1| hypothetical protein bcere0025_6710 [Bacillus cereus F65185]
 gi|228808412|gb|EEM54920.1| hypothetical protein bthur0006_6970 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 254

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 101/260 (38%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFS-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   +N  ++      + I + + S   + +++  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNDMNKTLVMYMGASILIGSFIGSFGANILEEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    +        + ++  +   V G  SG +G GG      +ML      +    AT
Sbjct: 120 MMFVPKQNNSGDVKYNKWLASLLAFVVGGASGIIGAGGSFLLVPIMLVILKLPLRMTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V I A++ I   SI   PL  ++   +
Sbjct: 180 SIAITFISSIGITTGKMVTGQV-----------VIIPALI-IAVASIFAAPLGARVGKRL 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S ++  T+   
Sbjct: 228 NQKVLQYVLSTLIVGTAVKM 247


>gi|323440925|gb|EGA98633.1| hypothetical protein SAO11_0356 [Staphylococcus aureus O11]
          Length = 275

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 92/249 (36%), Gaps = 33/249 (13%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P +       G+  +I   +A+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTMVYLGVEHGLLHNITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            +++ S +  ++     N  F IF + + IL++ R+++   + F                
Sbjct: 92  GSLLGSFISRYLTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                     +I   + G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YHYSVPPLFAFITTFLIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            + +  I              G V  G  +I++  S     +  K++  I    +     
Sbjct: 212 MSSIGHIAQ------------GHVAWGYAIILIISSYFGAKIGVKVNQSIKSDTVVTLLR 259

Query: 269 MIMFTTSFV 277
            +M      
Sbjct: 260 TVMLLMGIY 268


>gi|313634576|gb|EFS01059.1| integral membrane protein, putative [Listeria seeligeri FSL N1-067]
 gi|313639169|gb|EFS04118.1| integral membrane protein, putative [Listeria seeligeri FSL S4-171]
          Length = 246

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 119/255 (46%), Gaps = 24/255 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I    + +  +  +    G+GGG++++P+L     LMGI        +  T   +   T 
Sbjct: 3   IITYFLIALSTSVIGSFLGIGGGVILLPILL----LMGISQGTAAFSSALTVFTMAIFT- 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM- 141
             S    R+ G + + +          TT + +++   + ++     +    +++ +LM 
Sbjct: 58  -CSIYYKRKQGNVGLAL--KIAITSIPTTFIGAIVNQMLPEAVYRFLYGALIVVLILLMV 114

Query: 142 LKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATAT 198
            K  R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +   A+AT
Sbjct: 115 WKNKRNNEQPHFLSKYRIMPYLFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQKTASAT 174

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+ V+ L +F ++      G        +S+G       + ++P +IL   + T+L+ ++
Sbjct: 175 SSYVTLLTSFASIGSYAIIGGS-----DFSIG-------IYMIPGAILGAIIGTRLNKLL 222

Query: 259 GKKYLTIGFSMIMFT 273
            +K++ I F++++  
Sbjct: 223 DEKWIAILFNILLVA 237



 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +   + G L+GLFG+GGG +++P+L   F L           A  TS  V   TS  S  
Sbjct: 136 LFGVIIGFLAGLFGIGGGPIVIPILLLIFMLN-------QKTASATSSYVTLLTSFASIG 188

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +   G  +  I    I    +  ++ + +   +D+ ++   F I  + +  L L +
Sbjct: 189 SYAIIGGSDFSIGIYMIPGAILGAIIGTRLNKLLDEKWIAILFNILLVALFALNLIK 245


>gi|291279735|ref|YP_003496570.1| hypothetical protein DEFDS_1353 [Deferribacter desulfuricans SSM1]
 gi|290754437|dbj|BAI80814.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 273

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/270 (19%), Positives = 94/270 (34%), Gaps = 47/270 (17%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           S   G+GGG ++VPVL+  F+       + +HVA+ TSL  +   S  +  E+ + G  N
Sbjct: 17  SSFLGIGGGSIIVPVLTLVFK-------VPIHVAIATSLISVIFASSNASAEYIKKGLTN 69

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN 156
           +KI      V     V+  L+   +++ +L   F +  L+     +K            N
Sbjct: 70  IKIGLFLETVTTFFAVLGGLLSVSINEKYLFIMFGVVLLITAYFYIKNIVGKNSDLMSSN 129

Query: 157 ---------------------------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-Y 188
                                          +     G LSG LG+GGG+F    M    
Sbjct: 130 KNSKSFFSGNYYDENLNKKITYTPQRLISTTVVSSTAGLLSGMLGIGGGVFKVPAMNLIS 189

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
              I  +T TS  + ++ A  A LV + +              +N      ++      +
Sbjct: 190 KIPIKVSTTTSNFMMSITAAAASLVYLKTNL------------INPLIAGFVVSGVFFGS 237

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +  K    +  + +   F+  +   +   
Sbjct: 238 NIGVKFFPKLKDEKIKFLFTAFLILIAIQM 267



 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V S  +G LSG+ G+GGG+  VP ++           I + V+  TS  +++ T+  + +
Sbjct: 161 VVSSTAGLLSGMLGIGGGVFKVPAMNLI-------SKIPIKVSTTTSNFMMSITAAAASL 213

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            + +   IN  I    +  +   + +       +    +   F  F +L+ I ML R
Sbjct: 214 VYLKTNLINPLIAGFVVSGVFFGSNIGVKFFPKLKDEKIKFLFTAFLILIAIQMLYR 270


>gi|282916172|ref|ZP_06323935.1| hypothetical protein SATG_01696 [Staphylococcus aureus subsp.
           aureus D139]
 gi|283769988|ref|ZP_06342880.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           H19]
 gi|282320120|gb|EFB50467.1| hypothetical protein SATG_01696 [Staphylococcus aureus subsp.
           aureus D139]
 gi|283460135|gb|EFC07225.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           H19]
          Length = 275

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 92/249 (36%), Gaps = 33/249 (13%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P +       G+  +I   +A+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTMVYLGVEHGLLHNITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            +++ S +  ++     N  F IF + + IL++ R+++   + F                
Sbjct: 92  GSLLGSFISRYLTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                     +I   + G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YHYSVPPLFAFITTFLIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            + +  I              G V  G  +I++  S     +  K++  I    +     
Sbjct: 212 MSSIGHIAQ------------GHVAWGYAIILIISSYFGAKIGVKVNQSIKSDTVVTLLR 259

Query: 269 MIMFTTSFV 277
            +M      
Sbjct: 260 TVMLLMGIY 268


>gi|258424390|ref|ZP_05687270.1| conserved hypothetical protein [Staphylococcus aureus A9635]
 gi|257845403|gb|EEV69437.1| conserved hypothetical protein [Staphylococcus aureus A9635]
          Length = 275

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 92/249 (36%), Gaps = 33/249 (13%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P +       G+  +I   VA+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTMVYLGVEHGLLHNITTQVAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            +++ S +  ++     N  F IF + + IL++ R+++   + F                
Sbjct: 92  GSLLGSFISRYLTFESFNLYFGIFLIFVAILLMIRNKIKPFKIFDKPKYEKTYVDAKGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                     ++   + G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YHYSVPPLFAFVTTFLIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            + +  I              G V  G  +I++  S     +  K++  I    +     
Sbjct: 212 MSSIGHIAQ------------GHVAWGYAIILIISSYFGAKIGVKVNQSIKSDTVVTLLR 259

Query: 269 MIMFTTSFV 277
            +M      
Sbjct: 260 TVMLLMGIY 268


>gi|70727031|ref|YP_253945.1| hypothetical protein SH2030 [Staphylococcus haemolyticus JCSC1435]
 gi|68447755|dbj|BAE05339.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 275

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 111/280 (39%), Gaps = 33/280 (11%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  I L+++    S  L  L G+GGG+++VP L        +   I   +A+GTS  ++
Sbjct: 1   MLVTIILLVLIGLFSAILGSLVGIGGGIIIVPTLVYLGVTHDVLHGITPQIAIGTSSVIL 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T + S + + +   +++K    ++F L   +++ S +  ++     N  F IF +++ 
Sbjct: 61  IVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLLGSFLSRYLTLESFNLYFGIFMIIVS 120

Query: 139 ILMLKRDRLYCERKFPD--------------------NYVKYIWGMVTGFLSGALGVGGG 178
           I+++ R ++   + F                          ++  +  G L+G  G+GGG
Sbjct: 121 IILMVRHKIKPFKIFDKEKYRKTYVDSEGKTYHYSVPPLFAFVATLFIGILTGLFGIGGG 180

Query: 179 IFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
                LML  +    + A  TS  +    +  + +  I              G V     
Sbjct: 181 ALMTPLMLIVFRFPPHVAVGTSMMMIFFSSVMSSIGHILQ------------GHVAWSYS 228

Query: 238 LIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           +I++  S +   +  ++++ I  + +      +M      
Sbjct: 229 IILIISSYIGAQIGVRVNHSIKSETVVTLLRTVMLIMGVY 268


>gi|329770346|ref|ZP_08261729.1| hypothetical protein HMPREF0433_01493 [Gemella sanguinis M325]
 gi|328836704|gb|EGF86360.1| hypothetical protein HMPREF0433_01493 [Gemella sanguinis M325]
          Length = 282

 Score = 87.1 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 62/286 (21%), Positives = 105/286 (36%), Gaps = 53/286 (18%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   IV + L+G L  L G+GGG+++ P L+  F        I +  A+G S+  +  TS
Sbjct: 4   ILQFIVIAILAGFLGSLVGIGGGMIITPALTILF-------GIDIKYAIGASIVAVIATS 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S +   R    NM++            +V +LM        L   F++  L     ML
Sbjct: 57  SGSAIAFVRDHVSNMRVGMLLEIFTTAGGIVGALMAGVFSSKVLYIFFSLILLNSFYGML 116

Query: 143 KRDRLYCERKFPDNYVK---------------------------------YIWGMVTGFL 169
           K+  L  ++K  +  VK                                  +     GF 
Sbjct: 117 KKTGLITKKKIREEVVKNDKYADKYQLNSSYYDKATGKTVEYNVDNVPQGSLVMFGAGFA 176

Query: 170 SGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG LG+G G F  + +  +    I  +TATS  +  + A  + L+  ++G          
Sbjct: 177 SGLLGIGSGAFKVIALDNYMKLPIKASTATSNFMMGVTATASALIYFFNGT--------- 227

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
              +N      I   +++ +    K+   +  KY+   F  I+  T
Sbjct: 228 ---INPMIAAPIAVGTLIGSRTGAKVMQHLEAKYIRYIFLPILLFT 270



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 7/125 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           VD +    +  F +G  SGL G+G G   V  L    +L        +  +  TS  ++ 
Sbjct: 160 VDNVPQGSLVMFGAGFASGLLGIGSGAFKVIALDNYMKL-------PIKASTATSNFMMG 212

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S + +  +GTIN  I         I +   + ++ H++  ++   F    L   I
Sbjct: 213 VTATASALIYFFNGTINPMIAAPIAVGTLIGSRTGAKVMQHLEAKYIRYIFLPILLFTII 272

Query: 140 LMLKR 144
            M  +
Sbjct: 273 NMFLK 277


>gi|229171562|ref|ZP_04299141.1| hypothetical protein bcere0006_6860 [Bacillus cereus MM3]
 gi|228611907|gb|EEK69150.1| hypothetical protein bcere0006_6860 [Bacillus cereus MM3]
          Length = 254

 Score = 87.1 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 101/260 (38%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + + +  +N  +A    +  I
Sbjct: 60  VATFAGAWAYRKSNDMDKTLVVYMGASILIGSFIGSFGANVLAEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R        + ++  +   + G  SG +G GG      +ML      I    AT
Sbjct: 120 MMFVPKRNNSGEVTYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRTTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V I A++ I   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQV-----------VVIPALI-IAVASIFAAPLGVRVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAVKM 247


>gi|313142542|ref|ZP_07804735.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313131573|gb|EFR49190.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
          Length = 242

 Score = 87.1 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 103/254 (40%), Gaps = 24/254 (9%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             L+G L+GLFG+GGG ++VP++              + +A+G S+  +  +SV     +
Sbjct: 2   GLLAGILAGLFGIGGGAIIVPMMILL--------GNDIKIAIGISIMQMIFSSVYGSYVN 53

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
            +   ++ +          I    + +++S +  S L   F++F +   +     +    
Sbjct: 54  YKKKNLDFRDGVYVGIGGLIGASFSGVVVSSMPSSILEIIFSLFIVYSIMRFFFTNAYGG 113

Query: 150 ERKFPDNYVKYIW----GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
           ERK  + +   ++    G V G  + +LG+GGG+    L+ +Y          S+     
Sbjct: 114 ERKVGEGWKSILFLIGCGCVVGVFAISLGIGGGMMLAPLLAYY-------LGYSSKQIVP 166

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           I+   ++    SG+    L     G+V+     I+   S++   +       +  K    
Sbjct: 167 ISLFFVIFSSVSGFTSLALH----GYVDYAQGCIVGIASLIGVRIGIWTLSKVDSKKHKY 222

Query: 266 G-FSMIMFTTSFVF 278
              +M +F  + +F
Sbjct: 223 ALLAMYLFILAIMF 236



 Score = 40.4 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 12/117 (10%)

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
            G++ G L+G  G+GGG     +M+  G  I  A   S       +        Y  +  
Sbjct: 1   MGLLAGILAGLFGIGGGAIIVPMMILLGNDIKIAIGISIMQMIFSSVYGS----YVNYKK 56

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             L      +V IG ++      ++++         +    L I FS+ +  +   F
Sbjct: 57  KNLDFRDGVYVGIGGLIGASFSGVVVS--------SMPSSILEIIFSLFIVYSIMRF 105



 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 46/122 (37%), Gaps = 7/122 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  +I    + G  +   G+GGG+++ P+L+     +G      + +    SL  +  +S
Sbjct: 124 ILFLIGCGCVVGVFAISLGIGGGMMLAPLLAY---YLGYSSKQIVPI----SLFFVIFSS 176

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V  F     HG ++            I   +    +S VD      A     L +  +M 
Sbjct: 177 VSGFTSLALHGYVDYAQGCIVGIASLIGVRIGIWTLSKVDSKKHKYALLAMYLFILAIMF 236

Query: 143 KR 144
           ++
Sbjct: 237 EK 238


>gi|229074487|ref|ZP_04207516.1| hypothetical protein bcere0024_6760 [Bacillus cereus Rock4-18]
 gi|229101541|ref|ZP_04232265.1| hypothetical protein bcere0019_7100 [Bacillus cereus Rock3-28]
 gi|229114374|ref|ZP_04243792.1| hypothetical protein bcere0017_6730 [Bacillus cereus Rock1-3]
 gi|228669053|gb|EEL24477.1| hypothetical protein bcere0017_6730 [Bacillus cereus Rock1-3]
 gi|228681871|gb|EEL36024.1| hypothetical protein bcere0019_7100 [Bacillus cereus Rock3-28]
 gi|228708607|gb|EEL60751.1| hypothetical protein bcere0024_6760 [Bacillus cereus Rock4-18]
          Length = 254

 Score = 87.1 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 101/260 (38%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTAHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   +N  ++      + I + + S   + +++  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNDMNKTLVMYMGASILIGSFIGSFGANILEEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    +        + ++  +   V G  SG +G GG      +ML      +    AT
Sbjct: 120 MMFVPKQNNSGDVKYNKWLASLLAFVVGGASGIIGAGGSFLLVPIMLVILKLPLRMTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V I A++ I   SI   PL  ++   +
Sbjct: 180 SIAITFISSIGITTGKVITGQV-----------VIIPALI-IAVASIFAAPLGARVGKRL 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S ++  T+   
Sbjct: 228 NQKVLQYVLSTLIVGTAVKM 247


>gi|218295674|ref|ZP_03496470.1| protein of unknown function DUF81 [Thermus aquaticus Y51MC23]
 gi|218243833|gb|EED10360.1| protein of unknown function DUF81 [Thermus aquaticus Y51MC23]
          Length = 246

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +++A   +G LSG+ GVGGG +MVP +            +  H A GTSL  + P S 
Sbjct: 130 LTLLLAGAFTGFLSGMMGVGGGTIMVPAMVLLL-------GMAQHTAQGTSLLAMVPASF 182

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +    H R G +   ++   +  + + T +   +   + +  L   FA   L      L+
Sbjct: 183 VGAYTHFRLGNVERDLVPGLVPGVLLGTFLGGELAHFLPEGGLRGVFAAVLLWTAWRYLR 242

Query: 144 RD 145
             
Sbjct: 243 PK 244



 Score = 77.0 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 24/238 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            VM+P++    +L         H A GTSL  +  T +M    +   G++++K       
Sbjct: 22  TVMIPLMVGLLKL-------SQHQAHGTSLVAVFFTGLMGAFTYGLQGSLDLKAGLLLAL 74

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC----ERKFPDNYVKYI 161
              +T    +     + ++ L +AF  F  L+ +L+L +  L        +        +
Sbjct: 75  TAILTARYGARYAHSLPEARLRRAFGWFLFLVSLLLLLKPYLAPVGLVRGEVAQGLTLLL 134

Query: 162 WGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G  TGFLSG +GVGGG      M L  G + + A  TS       +F         G  
Sbjct: 135 AGAFTGFLSGMMGVGGGTIMVPAMVLLLGMAQHTAQGTSLLAMVPASFVGAYTHFRLGNV 194

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              L P             ++P  +L T L  +L++ + +  L   F+ ++  T++ +
Sbjct: 195 ERDLVP------------GLVPGVLLGTFLGGELAHFLPEGGLRGVFAAVLLWTAWRY 240


>gi|319891901|ref|YP_004148776.1| hypothetical protein SPSINT_0611 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161597|gb|ADV05140.1| hypothetical protein SPSINT_0611 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323465008|gb|ADX77161.1| conserved membrane protein, putative [Staphylococcus
           pseudintermedius ED99]
          Length = 274

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 108/276 (39%), Gaps = 33/276 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++I+  FLS  +  L G+GGG+++VP L      + I   I    A+GTS  ++  T 
Sbjct: 3   IIILILVGFLSAIIGSLVGIGGGIIIVPTLIYFGVTLNILGGITPQTAIGTSSIILIATG 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S + + +   +++K    +   +    ++ + +  ++     N  F +F +L+ +L++
Sbjct: 63  LSSTVGYLKQKQVDVKNGIIFTIGIIPGALIGAYLSQYLTLHSFNLYFGMFLILISVLLM 122

Query: 143 KRDRLYCERKFPD--------------------NYVKYIWGMVTGFLSGALGVGGGIFTN 182
            R R+   + F                        +  I   + G  +G  G+GGG    
Sbjct: 123 VRHRIPPIKAFQQERYMKSFTDAHGEHYRYGVVPTIAIIASFIIGLTAGLFGIGGGALMT 182

Query: 183 LLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
            LML  +    + A  TS  +    +    +  I             LG V  G  LI++
Sbjct: 183 PLMLLVFRFPPHIAVGTSMMMIFFSSVTGSIGHIM------------LGHVLWGYSLILI 230

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             S +   L  +L+  +    + +   ++M      
Sbjct: 231 ISSWVGAQLGVRLNKTVKSDTVVLILRLVMLGLGIY 266



 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 7/122 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            + I+ASF+ G  +GLFG+GGG +M P++   F+          H+A+GTS+ +I  +SV
Sbjct: 157 TIAIIASFIIGLTAGLFGIGGGALMTPLMLLVFRF-------PPHIAVGTSMMMIFFSSV 209

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + H   G +        I    +   +   +   V    +     +  L +GI ++ 
Sbjct: 210 TGSIGHIMLGHVLWGYSLILIISSWVGAQLGVRLNKTVKSDTVVLILRLVMLGLGIYLIL 269

Query: 144 RD 145
           + 
Sbjct: 270 QS 271


>gi|212640166|ref|YP_002316686.1| putative permease [Anoxybacillus flavithermus WK1]
 gi|212561646|gb|ACJ34701.1| Predicted permease [Anoxybacillus flavithermus WK1]
          Length = 258

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 103/263 (39%), Gaps = 18/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +I  I +  F+   +SG+ G+GG ++  P+L     L+G   +   H   G S   + 
Sbjct: 3   IGFIITIFLIGFIGSFISGMVGIGGSIIKYPMLLYIPPLLGY-AAFSAHEVSGISAIQVL 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++     +R+ G +N  ++      + I + +       + +  +N  +A+   +  +
Sbjct: 62  FATIGGVWAYRKGGYLNKTLIIYMGTSILIGSFIGGYGSKLMSEGGINIVYAVLATIAAV 121

Query: 140 LMLKRDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYK 194
           +M    +    +  ++   + ++      + G  +G +G  G      +ML         
Sbjct: 122 MMFVPKKGIDNIPLDQVTFNKWLAAALAFIVGVSAGIVGAAGAFILVPIMLVVLKIPTRM 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             ATS  ++ + +  A + +I +G            F    A + ++  S++ +P+   +
Sbjct: 182 TIATSLAITFISSIGATVGKITTGQ-----------FDFWTAFI-MVVASLIASPIGANV 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K L    + ++  T+  
Sbjct: 230 GKKVNTKVLQFILAALIVATAIK 252



 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 47/131 (35%), Gaps = 7/131 (5%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  D V     L    +F+ G  +G+ G  G  ++VP++    +       I   + + T
Sbjct: 133 IPLDQVTFNKWLAAALAFIVGVSAGIVGAAGAFILVPIMLVVLK-------IPTRMTIAT 185

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           SL +   +S+ + +     G  +       +    I + + + +   V+   L    A  
Sbjct: 186 SLAITFISSIGATVGKITTGQFDFWTAFIMVVASLIASPIGANVGKKVNTKVLQFILAAL 245

Query: 134 CLLMGILMLKR 144
            +   I +   
Sbjct: 246 IVATAIKIWLD 256


>gi|325964992|ref|YP_004242898.1| permease [Arthrobacter phenanthrenivorans Sphe3]
 gi|323471079|gb|ADX74764.1| putative permease [Arthrobacter phenanthrenivorans Sphe3]
          Length = 299

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 82/234 (35%), Gaps = 26/234 (11%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L                 A+  SL V+A TS +S   H R G +  +    +     
Sbjct: 31  VPILVYV-------AGFEAKEAIAASLFVVAVTSAVSVFSHARGGRVMWRTGLIFGAAGM 83

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY------CERKFPDNYVKYIW 162
               V  L+  H+    L  AFA+  +   + ML+  +          +         + 
Sbjct: 84  AGAFVGGLLGGHIPGQILLIAFAVMMVATSVAMLRGRKRKNDDGAAPAKHELPLGRVLLD 143

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
           G V G ++G +G GGG      +    G  +  A  TS  V A+ +F  L   + +    
Sbjct: 144 GAVVGLVTGLVGAGGGFLVVPALALLGGLPMSVAVGTSLVVIAMKSFAGLAGYLTTVQ-- 201

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                     ++ G  L +   +++ + +  KL+  I +  L   F   +    
Sbjct: 202 ----------LDWGVTLGVTAAAVVGSLIGAKLAGRIPEAVLRKAFGWFVLAMG 245



 Score = 69.3 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 7/122 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++   + G ++GL G GGG ++VP L+           + M VA+GTSL VIA  S   
Sbjct: 140 VLLDGAVVGLVTGLVGAGGGFLVVPALALL-------GGLPMSVAVGTSLVVIAMKSFAG 192

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +     ++  +         + +++ + +   + ++ L KAF  F L MG  +L + 
Sbjct: 193 LAGYLTTVQLDWGVTLGVTAAAVVGSLIGAKLAGRIPEAVLRKAFGWFVLAMGTFVLVQQ 252

Query: 146 RL 147
             
Sbjct: 253 AP 254


>gi|219853959|ref|YP_002471081.1| hypothetical protein CKR_0616 [Clostridium kluyveri NBRC 12016]
 gi|219567683|dbj|BAH05667.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 283

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 99/294 (33%), Gaps = 48/294 (16%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  D +   I  I + S ++G +  + G+GGG V+ P L+  F        I +  A+G 
Sbjct: 1   MGDDLLSLLILQIFIISIVAGIVGSILGLGGGTVITPALTILF-------GIDIKYAIGA 53

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           SL  +  TS  S + + R    N++I         +  +  + +   ++  +L   F I 
Sbjct: 54  SLISVIATSSGSAVAYIRDKLTNIRIGMFLEIATTLGAITGAFLGGIINPYYLYFLFGIL 113

Query: 134 CLLMGILMLKRDRLYCER----------------------------KFPDNYVKYIWGMV 165
            L     M K+ R+                                K       +     
Sbjct: 114 LLYSAFAMFKKGRMESTEIIETHPLAEKLKLNGQYHDKFLNEDISYKVSGVPSGFGVMYG 173

Query: 166 TGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            G +SG LG+G G F  + M LF    +  ++ATS  +  + A  +  + +  G     +
Sbjct: 174 AGIISGLLGIGSGSFKVMAMDLFMKLPLKVSSATSNFMMGVTATASAGIYLLRGDIDPKI 233

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                          +    +L   +  K+   +  K +   F   +   S   
Sbjct: 234 S------------APVALGVLLGATIGVKIMENMKSKTIRKIFVPFLIYISIQM 275



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G +SGL G+G G       S     M +   + + V+  TS  ++  T+  S   +   
Sbjct: 174 AGIISGLLGIGSG-------SFKVMAMDLFMKLPLKVSSATSNFMMGVTATASAGIYLLR 226

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           G I+ KI       + +   +   ++ ++    + K F  F + + I M+ +
Sbjct: 227 GDIDPKISAPVALGVLLGATIGVKIMENMKSKTIRKIFVPFLIYISIQMILK 278


>gi|282163341|ref|YP_003355726.1| hypothetical protein MCP_0671 [Methanocella paludicola SANAE]
 gi|282155655|dbj|BAI60743.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 263

 Score = 86.7 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 99/262 (37%), Gaps = 18/262 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L  +   +SG   G+ G+GG  ++VP L+  F        + +++A+G SL      S
Sbjct: 7   LALFFITGIISGLFGGMLGIGGATILVPALTLIF-------GLPVYLAIGVSLLNNVAVS 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + M +++ G +N +++        +  ++ + + +   ++ +   F  F L M    L
Sbjct: 60  TSATMRYKKRGLLNRRVILVMNLGSILGIIIGTFIATRSPEAAIKVFFGAFLLFMVANGL 119

Query: 143 KRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKAT 196
            R                       G V G L   LG+GGG      +   +   + +A 
Sbjct: 120 LRRNAVDSVGMVELTPKTEVGLSGLGFVMGLLGALLGLGGGTVAVPTLNNVFKMPLKQAI 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A S     L +    ++  Y   G       +     +     I+P SI+   L  ++S 
Sbjct: 180 ANSLATVILASALGAVIYFYLSAGALFSAEEA-----LLTAFTIVPGSIIGASLGARISE 234

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            I  KY+   F  ++   ++  
Sbjct: 235 RIDTKYIKYIFYAMLLYIAYNM 256


>gi|228938045|ref|ZP_04100666.1| hypothetical protein bthur0008_7160 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228970921|ref|ZP_04131558.1| hypothetical protein bthur0003_7060 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228788730|gb|EEM36672.1| hypothetical protein bthur0003_7060 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228821671|gb|EEM67675.1| hypothetical protein bthur0008_7160 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326938548|gb|AEA14444.1| hypothetical protein CT43_CH0754 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 254

 Score = 86.7 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 101/260 (38%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   +N  ++      + I + + S   + +++  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNDMNKTLVMYMGASILIGSFIGSFGANILEEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    +        + ++  +   V G  SG +G GG      +ML      +    AT
Sbjct: 120 MMFVPKQNNSGDVKYNKWLASLLAFVVGGASGIIGAGGSFLLVPIMLVILKLPLRMTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V I A++ I   SI   PL  ++   +
Sbjct: 180 SIAITFISSIGITTGKVITGQV-----------VIIPALI-IAVASIFAAPLGARVGKRL 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S ++  T+   
Sbjct: 228 NQKVLQYVLSTLIVGTAVKM 247


>gi|253732723|ref|ZP_04866888.1| hypothetical membrane Spanning protein [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|253729334|gb|EES98063.1| hypothetical membrane Spanning protein [Staphylococcus aureus
           subsp. aureus TCH130]
          Length = 275

 Score = 86.7 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 93/249 (37%), Gaps = 33/249 (13%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P +       G+  +I   VA+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTMVYLGVEHGLLHNITTQVAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            +++ S +  ++     N  F IF + + IL++ R+++   + F                
Sbjct: 92  GSLLGSFISRYLTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                     ++   + G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YHYSVPPLFAFVTTFLIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            + +  I              G V  G  +I++  S +   +  K++  I    +     
Sbjct: 212 MSSIGHIAQ------------GHVAWGYAIILIISSYVGAKIGVKVNQSIKSDTVVTLLR 259

Query: 269 MIMFTTSFV 277
            +M      
Sbjct: 260 TVMLLMGIY 268


>gi|297583461|ref|YP_003699241.1| hypothetical protein Bsel_1159 [Bacillus selenitireducens MLS10]
 gi|297141918|gb|ADH98675.1| protein of unknown function DUF81 [Bacillus selenitireducens MLS10]
          Length = 272

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 98/255 (38%), Gaps = 31/255 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++++  F + TL  L G+GGG+++VP L     + GI   I   VA+GTSL ++  T +
Sbjct: 4   LVLLLLGFAAATLGSLIGLGGGIIVVPGLLILQDVTGIISGITPQVAVGTSLLIMIFTGL 63

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +  +I++K    +        +    +   +  +     F  F +++ I++  
Sbjct: 64  SSTLSYVKQKSIDLKSGLVFFIGSGPGAIFGVWLNQGLVMNQFLVIFGTFMIVISIVLWL 123

Query: 144 RDRLYCERKFPDNYVKY------------------IWGMVTGFLSGALGVGGGIFTNLLM 185
           +  +          + +                  + G + G +SG  G+GGG      M
Sbjct: 124 KKHVRPLSVPVGRNLYWTDHQGVEWTYGYQPVIGIMLGFIVGSISGLFGIGGGSLMVPAM 183

Query: 186 -LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
            L +    + A ATS  +  L A    +  I             +G V+    L ++P +
Sbjct: 184 ILLFAFPPHLAVATSMFMIMLSAIVGSVSHIL------------VGNVHWLYALALIPGA 231

Query: 245 ILITPLATKLSYMIG 259
                    L+  + 
Sbjct: 232 WFGGKSGALLNRRLS 246



 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            + I+  F+ G++SGLFG+GGG +MVP +   F       +   H+A+ TS+ +I  +++
Sbjct: 155 VIGIMLGFIVGSISGLFGIGGGSLMVPAMILLF-------AFPPHLAVATSMFMIMLSAI 207

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +  + H   G ++       I          +L+   +    L     IF +++   +L
Sbjct: 208 VGSVSHILVGNVHWLYALALIPGAWFGGKSGALLNRRLSSDRLVLLLRIFLIILAFRLL 266


>gi|126650500|ref|ZP_01722723.1| hypothetical protein BB14905_07918 [Bacillus sp. B14905]
 gi|126592656|gb|EAZ86655.1| hypothetical protein BB14905_07918 [Bacillus sp. B14905]
          Length = 282

 Score = 86.3 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 107/263 (40%), Gaps = 18/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +I  I +  FL   +SG+ G+GG ++  P+L     L+G   +   H   G     + 
Sbjct: 24  ITWILTIFLIGFLGSFVSGMLGIGGAIINYPMLLYIPPLLGF-MAFSAHEVSGIIAIQVF 82

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+     +R+ G +N  ++      +   + V S       +S +N  + +  L+  +
Sbjct: 83  FASIAGVWVYRKGGFLNKSLIIYMGGAILTGSFVGSFGSKFFSESGINIVYGVLALIAAV 142

Query: 140 LMLKRDRLYCERKFPD----NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYK 194
           +M  + +   ++   D      +  +  +V G  SG +G GGG     +ML   G     
Sbjct: 143 MMFIQKKQIDDQPMQDITFNKTLAILLAVVVGIGSGIVGAGGGFLLVPIMLVVLGIPTRM 202

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             ATS  ++ + +   ++ ++ +G                 A+++I+  S++  PL  + 
Sbjct: 203 TIATSLAITFISSIGGMVGKLMTGQVE-----------YFPALIMII-TSLIAAPLGARA 250

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K L    +M++  T+  
Sbjct: 251 GKKLNTKSLQGILAMLILATAIK 273


>gi|329765383|ref|ZP_08256963.1| hypothetical protein Nlim_0726 [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329138289|gb|EGG42545.1| hypothetical protein Nlim_0726 [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 258

 Score = 85.9 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 52/250 (20%), Positives = 96/250 (38%), Gaps = 24/250 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +I   F +G L  + G+GGG+V+VPVL+      G   +    +A   SL      ++
Sbjct: 6   LWLIPLGFAAGVLGSMIGLGGGIVVVPVLTF----FGFPPT----LAASNSLFAAFSNAI 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S   + R   I   +      +    T++ +L+ S V        F +  +   I +  
Sbjct: 58  GSTFSYSRQKRIEYSLGLKLGLLSIPGTILGALLSSDVTPGIFKILFGLVLISSAIYIFL 117

Query: 144 RDRLYC-ERKFPDNYVKYIWG--MVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATS 199
           R ++   E+K     + +  G     G +S   G+GGG     LM+   G ++ KA  TS
Sbjct: 118 RKKIETREKKLTKQMIIFAIGASFFAGIVSSFFGIGGGTIFVPLMVVGIGMTMKKAAPTS 177

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +    +   ++                LG  +     ++   + +      +LS  I 
Sbjct: 178 QFILLFASLSGIITHSI------------LGHPDFIQAGLLAAGAFVGGLFGARLSLDIK 225

Query: 260 KKYLTIGFSM 269
           ++YL I  S+
Sbjct: 226 ERYLQILVSV 235



 Score = 53.2 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 48/125 (38%), Gaps = 7/125 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I   I ASF +G +S  FG+GGG + VP++        +   + M  A  TS  ++  
Sbjct: 131 QMIIFAIGASFFAGIVSSFFGIGGGTIFVPLMV-------VGIGMTMKKAAPTSQFILLF 183

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S+   + H   G  +            +  +  + +   + + +L    ++  ++  I 
Sbjct: 184 ASLSGIITHSILGHPDFIQAGLLAAGAFVGGLFGARLSLDIKERYLQILVSVIIIIAAIK 243

Query: 141 MLKRD 145
           +    
Sbjct: 244 LFFDS 248



 Score = 36.2 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 12/123 (9%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
           D       G   G L   +G+GGGI    ++ F+G     A + S   +   A  +    
Sbjct: 4   DQLWLIPLGFAAGVLGSMIGLGGGIVVVPVLTFFGFPPTLAASNSLFAAFSNAIGSTFSY 63

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                       +SL        L +  +SI  T L   LS  +      I F +++ ++
Sbjct: 64  -----SRQKRIEYSL-------GLKLGLLSIPGTILGALLSSDVTPGIFKILFGLVLISS 111

Query: 275 SFV 277
           +  
Sbjct: 112 AIY 114


>gi|292670629|ref|ZP_06604055.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
 gi|292647795|gb|EFF65767.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
          Length = 277

 Score = 85.9 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 91/255 (35%), Gaps = 22/255 (8%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM-GTSLGVIAPTSVMSFMEHRR 91
            GT   L G+GGGL+ VP+        GI         + GTSL ++   ++   + + R
Sbjct: 27  VGTFGTLVGIGGGLICVPIFIFFLSDGGIYPYFHTAAQITGTSLVIVLSNALSGTLAYIR 86

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR---DRLY 148
              +       +         + S ++       L  ++  F L+M ++M       +  
Sbjct: 87  QQRVFFPAAVPFALATLPGAFLGSYIVDDFTGPMLYISYGSFLLVMALMMYWNATHKKHA 146

Query: 149 CERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGV 202
                P     +  +        GF+S   G+GGG+    LM++  G  ++ ATATS  V
Sbjct: 147 DVHTLPTDFTFNRSLGIGASAGVGFISSIFGIGGGVIHVPLMVYLLGFPVHMATATSHFV 206

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
            A  A   ++              + L  +     + I   + +   +   +S     K 
Sbjct: 207 LACSAAFGVVS------------HFLLNHIIWTPAICISIGAAVGAQIGAAISQKTKSKV 254

Query: 263 LTIGFSMIMFTTSFV 277
           + I  S+ MF     
Sbjct: 255 ILILLSLAMFGLGLR 269



 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I AS   G +S +FG+GGG++ VP++              +H+A  TS  V+A ++  
Sbjct: 161 LGIGASAGVGFISSIFGIGGGVIHVPLMVYLLGF-------PVHMATATSHFVLACSAAF 213

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + H     I             +   + + +        +    ++    +G+ ++
Sbjct: 214 GVVSHFLLNHIIWTPAICISIGAAVGAQIGAAISQKTKSKVILILLSLAMFGLGLRLI 271


>gi|332828843|gb|EGK01531.1| hypothetical protein HMPREF9455_02184 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 282

 Score = 85.9 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 104/285 (36%), Gaps = 47/285 (16%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  ++   +  +G +  L G+GGG+V++P+L+  F        + M  A+G +L     T
Sbjct: 8   FSIILFFGACFAGFIGSLTGLGGGVVVIPLLTLGF-------GVDMRYAIGAALVTSIAT 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  +   + + G  N++I            V+ +++  ++DK ++   F    +   +  
Sbjct: 61  SSGAAAAYIKEGITNVRIGMFLEIATTTGAVIGAIVAMYLDKVYIAIIFGCVLIFSAVRS 120

Query: 142 LKRDRLYCERKFPDN---------------------------YVKYIWGMVTGFLSGALG 174
           + +     +   P +                              Y    + G LSG LG
Sbjct: 121 ISKKEENIDYAAPGDKLGEKLKLNGSYPTKDGTIEKYNVHNVVGGYSLMTLAGVLSGLLG 180

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G    L M          +T TS  +  + A  + ++ +  G+   GL         
Sbjct: 181 IGSGALKVLAMDTAMKIPFKVSTTTSNFMVGVTAAASAVIYLQRGYIDPGL--------- 231

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               + I+   +L     +K+      K L + FS+++F  +   
Sbjct: 232 ---AMPIVVGVLLGAFFGSKILPKTNVKKLRLLFSVVIFFLAVSM 273



 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+G LSGL G+G G + V         M     I   V+  TS  ++  T+  S + + +
Sbjct: 171 LAGVLSGLLGIGSGALKV-------LAMDTAMKIPFKVSTTTSNFMVGVTAAASAVIYLQ 223

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G I+  +    +  + +     S ++   +   L   F++    + + M+  
Sbjct: 224 RGYIDPGLAMPIVVGVLLGAFFGSKILPKTNVKKLRLLFSVVIFFLAVSMIYN 276


>gi|313620197|gb|EFR91666.1| integral membrane protein, putative [Listeria innocua FSL S4-378]
          Length = 246

 Score = 85.9 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 122/258 (47%), Gaps = 25/258 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D I   ++A   +  +    G+GGG++++P+L     LMG+        +  T   +  
Sbjct: 1   MDMITYFLIA-LSTSVVGSFLGIGGGVILLPILL----LMGVSQGTAAFSSALTVFTMAI 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T   S    R+ G + + +          TT + +++   + ++     +    +++ +
Sbjct: 56  FT--CSIYYKRKQGNVGLAL--KIAITSIPTTFLGAIVNQMLPEAVYRFMYGALIVILLL 111

Query: 140 LM-LKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKA 195
           LM  K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +   A
Sbjct: 112 LMVWKKKRNNEKPHFLSKYRIMPYLFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQKTA 171

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +ATS+ V+ L +  ++      G        +S+G       + ++P +IL   + T+L+
Sbjct: 172 SATSSYVTLLTSLASIGSYAIVGGS-----DFSIG-------IYMIPGAILGALIGTRLN 219

Query: 256 YMIGKKYLTIGFSMIMFT 273
            ++ +K++ I F++++  
Sbjct: 220 KLLDEKWIAILFNILLVA 237



 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +   + G L+GLFG+GGG +++P+L   F L           A  TS  V   TS+ S  
Sbjct: 136 LFGVIIGFLAGLFGIGGGPIVIPILLLIFMLN-------QKTASATSSYVTLLTSLASIG 188

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +   G  +  I    I    +  ++ + +   +D+ ++   F I  + +  L L R
Sbjct: 189 SYAIVGGSDFSIGIYMIPGAILGALIGTRLNKLLDEKWIAILFNILLVALFALNLIR 245


>gi|323488645|ref|ZP_08093887.1| hypothetical protein GPDM_04854 [Planococcus donghaensis MPA1U2]
 gi|323397663|gb|EGA90467.1| hypothetical protein GPDM_04854 [Planococcus donghaensis MPA1U2]
          Length = 275

 Score = 85.9 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 89/253 (35%), Gaps = 33/253 (13%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP L            +     +G S+ ++  T + S + + +  T++ K    +  
Sbjct: 26  VILVPALLFMGTSFAFFPELSPQKIVGLSVIMMIFTGLSSTLAYMKVRTVDYKSGFIFFV 85

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN--------- 156
                T+V + +  ++D    N  F I  + + IL+L RD L   R F DN         
Sbjct: 86  GSAPGTIVGAFINKNLDLPSFNLYFGILLVFLSILLLLRDHLKAVRWFVDNGRKTTFTDR 145

Query: 157 -----------YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSA 204
                      +   +     G  SG  G+GGG      M L +    + A  TS  +  
Sbjct: 146 ENKEYVYGYPIWFALLLTFFVGVASGLFGIGGGSIIVPAMILLFLFPPHVAVGTSMLMVF 205

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           L A    +  I            SLG V     L ++P + +   +   L+  +  + L 
Sbjct: 206 LSALVNSVTHI------------SLGNVPWIYTLAVVPGAYIGAKIGAALNKRLNSEVLV 253

Query: 265 IGFSMIMFTTSFV 277
               +++      
Sbjct: 254 TILRIVLLVLGLR 266



 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 7/121 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   ++ +F  G  SGLFG+GGG ++VP +   F           HVA+GTS+ ++  ++
Sbjct: 156 IWFALLLTFFVGVASGLFGIGGGSIIVPAMILLFLF-------PPHVAVGTSMLMVFLSA 208

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++ + H   G +        +    I   + + +   ++   L     I  L++G+  +
Sbjct: 209 LVNSVTHISLGNVPWIYTLAVVPGAYIGAKIGAALNKRLNSEVLVTILRIVLLVLGLRSI 268

Query: 143 K 143
            
Sbjct: 269 Y 269


>gi|303246486|ref|ZP_07332765.1| protein of unknown function DUF81 [Desulfovibrio fructosovorans JJ]
 gi|302492196|gb|EFL52071.1| protein of unknown function DUF81 [Desulfovibrio fructosovorans JJ]
          Length = 274

 Score = 85.9 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 95/274 (34%), Gaps = 38/274 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+     G    L G GGG V++PVL   +          +      SL V+   +   
Sbjct: 11  FILLGLGVGAYGTLIGAGGGFVLMPVLLLLYPHDSPSLLTSI------SLAVVFFNAASG 64

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              + R G I+ K    +        V+ +L  + V +   +  F +  +   + ++ R 
Sbjct: 65  AQAYGRQGRIDYKSGLVFALAAVPGAVIGALSSNWVPRRVFDVIFGVILVAGALFLMVRR 124

Query: 146 RLYCERKFPDNYVK---------------------YIWGMVTGFLSGALGVGGGIFTNLL 184
                       +                       I  +  G+LS  LG+GGGI     
Sbjct: 125 NGAASPARGKPGLTHRRIVEHDGVVHEYDFRLRTGIIISLFVGYLSSFLGIGGGIIHVPA 184

Query: 185 MLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +++     ++ ATATS  + A++A    L  + +G  + G          +   + +   
Sbjct: 185 LVYILSFPVHVATATSHFILAIMALAGTLTHVATGVFVQG----------VHRTIYLALG 234

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           +++   +  +LS  +  +++    ++ +      
Sbjct: 235 AMVGAQVGAQLSNHLKGRWIIQSLAVALVFVGAR 268



 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 9/120 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+ S   G LS   G+GGG++ VP L              +HVA  TS  ++A  ++   
Sbjct: 160 IIISLFVGYLSSFLGIGGGIIHVPALVYILSF-------PVHVATATSHFILAIMALAGT 212

Query: 87  MEHRRHGTINMKILK--DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + H   G     + +         +   V + + +H+   ++ ++ A+  + +G  +L +
Sbjct: 213 LTHVATGVFVQGVHRTIYLALGAMVGAQVGAQLSNHLKGRWIIQSLAVALVFVGARILYQ 272


>gi|16799705|ref|NP_469973.1| hypothetical protein lin0630 [Listeria innocua Clip11262]
 gi|16413070|emb|CAC95862.1| lin0630 [Listeria innocua Clip11262]
          Length = 246

 Score = 85.5 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 122/258 (47%), Gaps = 25/258 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D I   ++A   +  +    G+GGG++++P+L     LMG+        +  T   +  
Sbjct: 1   MDMITYFLIA-LSTSVVGSFLGIGGGVILLPILL----LMGVSQGTAAFSSALTVFTMAI 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T   S    R+ G + + +          TT + +++   + ++     +    +++ +
Sbjct: 56  FT--CSIYYKRKQGNVGLAL--KIAITSIPTTFLGAIVNQMLPEAVYRFMYGALIVILLL 111

Query: 140 LM-LKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKA 195
           LM  K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +   A
Sbjct: 112 LMVWKKKRNNEKPHFLSKYRIMPYLFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQKTA 171

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +ATS+ V+ L +  ++      G        +S+G       + ++P +IL   + T+L+
Sbjct: 172 SATSSYVTLLTSLASIGSYAIVGGS-----DFSIG-------IYMIPGAILGALIGTRLN 219

Query: 256 YMIGKKYLTIGFSMIMFT 273
            ++ +K++ I F++++  
Sbjct: 220 KLLDEKWIAILFNILLIA 237



 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +   + G L+GLFG+GGG +++P+L   F L           A  TS  V   TS+ S  
Sbjct: 136 LFGVIIGFLAGLFGIGGGPIVIPILLLIFMLN-------QKTASATSSYVTLLTSLASIG 188

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +   G  +  I    I    +  ++ + +   +D+ ++   F I  + + +L L R
Sbjct: 189 SYAIVGGSDFSIGIYMIPGAILGALIGTRLNKLLDEKWIAILFNILLIALFVLNLIR 245


>gi|282865813|ref|ZP_06274863.1| protein of unknown function DUF81 [Streptomyces sp. ACTE]
 gi|282559457|gb|EFB65009.1| protein of unknown function DUF81 [Streptomyces sp. ACTE]
          Length = 265

 Score = 85.5 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 9/216 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+I    L+G  + LFG GGG V VPV+  A   +G D    M VA  TS  V+   +
Sbjct: 3   VVLLIGVGLLTGVTTVLFGFGGGFVAVPVVVWADAGLGAD---AMRVATATSALVMVVNA 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +     R   + ++     + +L +     +L         +  AF  +  L    +L
Sbjct: 60  GFATAVTPRRVLVALRGSGLLLILLAVGAWAGALATRLAPSGLVRWAFIGYVALTIADVL 119

Query: 143 KRDRLYCERKFPD------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
            R                   +  + G   G ++  LGVGG + T   M   G S++ A 
Sbjct: 120 LRPGFLRPHSQEGTAPGTSRPLPAVVGAPVGAVAAFLGVGGSVMTVPAMRRAGHSMHTAA 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           A +  ++  IA PA  V +              G V
Sbjct: 180 ALANPLTLAIAVPATAVALAGTAIPAAADAHLAGLV 215


>gi|289551261|ref|YP_003472165.1| hypothetical protein SLGD_01950 [Staphylococcus lugdunensis
           HKU09-01]
 gi|289180793|gb|ADC88038.1| hypothetical protein SLGD_01950 [Staphylococcus lugdunensis
           HKU09-01]
          Length = 275

 Score = 85.5 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 55/280 (19%), Positives = 115/280 (41%), Gaps = 33/280 (11%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +V     +I+   LS  +  L G+GGG+++VP L        +   I   +A+GTS  ++
Sbjct: 1   MVLTFIFLILIGLLSAVIGSLVGIGGGIIIVPTLVYLGVEHHLLHGITPQIAIGTSSVIL 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T + S + + +   +++K    ++F L   ++  SL+  ++     N  F IF +L+ 
Sbjct: 61  IVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLAGSLLSRYLTLESFNLYFGIFMILVS 120

Query: 139 ILMLKRDRLYCERKFPD--------------------NYVKYIWGMVTGFLSGALGVGGG 178
           I++++R ++   + F                        V ++  +  G L+G  G+GGG
Sbjct: 121 IILMERHKIKPIKLFDKPQYRKSYTDSEGVTYHYSVPPLVAFVATLFIGVLTGLFGIGGG 180

Query: 179 IFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
                LML  +    + A  TS  +    +  + +  I+             G V  G  
Sbjct: 181 ALMTPLMLIIFRFPPHVAVGTSMMMIFFSSVMSSIGHIFQ------------GHVAWGYS 228

Query: 238 LIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           +I++  S +   +  K+++ I  + + +    +M      
Sbjct: 229 IILIISSYIGAQIGVKINHSIKSETVVMLLRTVMLFMGIY 268



 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 7/122 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  VA+   G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SV
Sbjct: 159 LVAFVATLFIGVLTGLFGIGGGALMTPLMLIIFRF-------PPHVAVGTSMMMIFFSSV 211

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           MS + H   G +        I    I   +   +   +    +        L MGI ++ 
Sbjct: 212 MSSIGHIFQGHVAWGYSIILIISSYIGAQIGVKINHSIKSETVVMLLRTVMLFMGIYLIF 271

Query: 144 RD 145
           + 
Sbjct: 272 KS 273


>gi|325576677|ref|ZP_08147364.1| membrane protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325161124|gb|EGC73240.1| membrane protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 264

 Score = 85.5 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 103/263 (39%), Gaps = 12/263 (4%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I ++I+   ++  +S +FG+GGG++MVP+L   F          + +   TSL ++ 
Sbjct: 3   LQLIFILILCGVMTNIMSAIFGIGGGVLMVPILYTLF------PQFPLQMIAATSLTIVM 56

Query: 80  PTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            +S ++ +   +   +IN K +  W   + I   +      +V    +   F I   L+ 
Sbjct: 57  GSSFINLIYFYKQKVSINYKAMLIWSVGMIIGVQLGFESSFYVPDIAIISVFVITLSLLA 116

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWG--MVTGFLSGALGVGGGIFTNLLM-LFYGASIYKA 195
           I  +        ++   +      G   + GF++G  G+GGG     L+        ++ 
Sbjct: 117 IRTIFSKETAIIQQSTADETIKGIGLSTIGGFIAGMTGIGGGSIMAPLIGQLKSVKAHQI 176

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
              +  +  +    +L   +           W +G+VN   V+I++  + +    + K+ 
Sbjct: 177 APYTNAMMFIGGLGSLYGYLSK--NSTYHFGWQIGYVNFSIVIIVVLSAFVTGFFSMKIR 234

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
             +    +     +I+   S   
Sbjct: 235 GKLSPHLVKKLLGIILLVISAYM 257



 Score = 35.8 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 52/139 (37%), Gaps = 3/139 (2%)

Query: 8   FSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKA--FQLMGIDDSI 65
           FS    + +    D     I  S + G ++G+ G+GGG +M P++ +    +   I    
Sbjct: 121 FSKETAIIQQSTADETIKGIGLSTIGGFIAGMTGIGGGSIMAPLIGQLKSVKAHQIAPYT 180

Query: 66  CMHVAMGTSLGVIAPTSVMSFMEH-RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
              + +G    +    S  S      + G +N  I+   +    +T   +  +   +   
Sbjct: 181 NAMMFIGGLGSLYGYLSKNSTYHFGWQIGYVNFSIVIIVVLSAFVTGFFSMKIRGKLSPH 240

Query: 125 FLNKAFAIFCLLMGILMLK 143
            + K   I  L++   ML 
Sbjct: 241 LVKKLLGIILLVISAYMLL 259


>gi|218895828|ref|YP_002444239.1| hypothetical protein BCG9842_B4500 [Bacillus cereus G9842]
 gi|218544230|gb|ACK96624.1| putative membrane protein [Bacillus cereus G9842]
          Length = 254

 Score = 85.5 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 101/260 (38%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVLLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + +++  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKTLVVYMGASILIGSFIGSFGANVLEEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R        + ++  +   + G  SG +G GG      +ML      I    AT
Sbjct: 120 MMFVPKRNNSGEVTYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRTTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V I A++ I   SI   PL  ++    
Sbjct: 180 SIAITFISSVGITTGKVITGQV-----------VVIPALI-IAVASIFAAPLGVRVGKGT 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAVKM 247


>gi|223042876|ref|ZP_03612924.1| putative membrane protein [Staphylococcus capitis SK14]
 gi|222443730|gb|EEE49827.1| putative membrane protein [Staphylococcus capitis SK14]
          Length = 275

 Score = 85.5 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 87/230 (37%), Gaps = 33/230 (14%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L        I   I   +A+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTLVYLGVNHHILHGITPQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            +++ S +   +     N  F IF + + IL++ R ++   + F                
Sbjct: 92  GSLIGSFLSQFLTLDSFNLYFGIFMICVAILLMVRHKIKPFKIFDKPQYERTYVDAEGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                  +  ++  +  G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YHYSVPPFFAFVATLFIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
            + +  I              G V  G  + ++  SI+   +  K++  +
Sbjct: 212 MSSIGHIVQ------------GHVAWGYSVALIISSIIGAQIGVKVNRSL 249



 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            VA+   G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SVMS 
Sbjct: 162 FVATLFIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSVMSS 214

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           + H   G +        I    I   +   +   +    +        LL+G  ++ + 
Sbjct: 215 IGHIVQGHVAWGYSVALIISSIIGAQIGVKVNRSLKSDTVVMLLRTVMLLLGAYLIIKS 273


>gi|223995275|ref|XP_002287321.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220976437|gb|EED94764.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 298

 Score = 85.5 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 8/119 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
                SG LSG+FGVGGG ++VP L            +  H A+GTSL  +   +++   
Sbjct: 187 FIGMFSGFLSGMFGVGGGAIVVPSLVL-------STDMSHHTALGTSLCAMVLPAMVGTY 239

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSL-MISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            H + G +N ++         +   V    +  H+++  L   F+   L++G+   ++ 
Sbjct: 240 THAKRGNVNWRVGPLLALGSAVGAYVGGKEVGIHMEEGVLQAGFSCLMLVLGVKTWRKS 298



 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 93/304 (30%), Gaps = 74/304 (24%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDD---------SICMHVAMGTSLGVIAPTSVMSF 86
           +  L G+GGG VM+P+++ A                  +  H A GTSL  +  T +   
Sbjct: 2   MGSLAGMGGGFVMIPLMTAASATRNATTTSGWWRGGLGLSQHEAHGTSLFAVGTTGLAGA 61

Query: 87  MEH-----------------------RRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           + +                       +  G + + I         +T  + ++  S + +
Sbjct: 62  LGYGIRMSGDDEDVHNEHQSTDSTTKQPKGLVELDIALALTATAMVTARLGAISSSFLSE 121

Query: 124 SFLNKAFAIFCLLMGILMLKR------------DRLYCER----------------KFPD 155
             L +A   F + +  L+  +                 E+                +   
Sbjct: 122 RVLQRALGAFMICVAPLVPGKAYLEALQDAHDPSNPEAEKHLHDDEAKHTHHGELSQLER 181

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVR 214
                  GM +GFLSG  GVGGG      ++     S + A  TS     L A       
Sbjct: 182 LLPASFIGMFSGFLSGMFGVGGGAIVVPSLVLSTDMSHHTALGTSLCAMVLPAMVGT--- 238

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK-LSYMIGKKYLTIGFSMIMFT 273
               +          G VN     ++   S +   +  K +   + +  L  GFS +M  
Sbjct: 239 ----YTHAKR-----GNVNWRVGPLLALGSAVGAYVGGKEVGIHMEEGVLQAGFSCLMLV 289

Query: 274 TSFV 277
               
Sbjct: 290 LGVK 293


>gi|313624760|gb|EFR94706.1| integral membrane protein, putative [Listeria innocua FSL J1-023]
          Length = 246

 Score = 85.1 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 122/258 (47%), Gaps = 25/258 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D I   ++A   +  +    G+GGG++++P+L     LMG+        +  T   +  
Sbjct: 1   MDMITYFLIA-LSTSVVGSFLGIGGGVILLPILL----LMGVSQGTAAFSSALTVFTMAI 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T   S    R+ G + + +          TT + +++   + +S     +    +++ +
Sbjct: 56  FT--CSIYYKRKQGNVGLAL--KIAITSIPTTFLGAIVNQMLPESVYRFMYGALIVILLL 111

Query: 140 LM-LKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKA 195
           LM  K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  S   A
Sbjct: 112 LMVWKKKRNNEKPHFLSKYRIMPYLFGVIIGFLAGLFGIGGGPIVIPILLLIFMLSQKTA 171

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +ATS+ V+ L +  ++      G        +S+G       + ++P +IL   + T+L+
Sbjct: 172 SATSSYVTLLTSLASIGSYAIVGGS-----DFSIG-------IYMIPGAILGALIGTRLN 219

Query: 256 YMIGKKYLTIGFSMIMFT 273
            ++ +K++ I F++++  
Sbjct: 220 KLLDEKWIAILFNILLIA 237



 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +   + G L+GLFG+GGG +++P+L   F L           A  TS  V   TS+ S  
Sbjct: 136 LFGVIIGFLAGLFGIGGGPIVIPILLLIFML-------SQKTASATSSYVTLLTSLASIG 188

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +   G  +  I    I    +  ++ + +   +D+ ++   F I  + +  L L R
Sbjct: 189 SYAIVGGSDFSIGIYMIPGAILGALIGTRLNKLLDEKWIAILFNILLIALFALNLIR 245


>gi|189423156|ref|YP_001950333.1| hypothetical protein Glov_0075 [Geobacter lovleyi SZ]
 gi|189419415|gb|ACD93813.1| protein of unknown function DUF81 [Geobacter lovleyi SZ]
          Length = 276

 Score = 85.1 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 54/282 (19%), Positives = 95/282 (33%), Gaps = 48/282 (17%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I + +  +G    + G+GGG+++VPVL+  F        + M  A+  S   I  TS  +
Sbjct: 8   IFLIAITAGVFGSMLGLGGGIIIVPVLTLLF-------GVPMRTAVAASTVSIIATSTGA 60

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            +   +    N ++            +  +L+  ++++ FL   F +     G  M K  
Sbjct: 61  AVAFLQDRLTNTRVAIWLEMGTATGALSGALIAGYLEQRFLYILFGLLLAYSGYNMFKSR 120

Query: 146 R----------------------------LYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
           +                               + +        I    +G  +G LG+G 
Sbjct: 121 KNELPEGVLPDRLSQKLQLQGSYVDRQLGKRIDYQVTGTLPGLIIMYFSGIAAGLLGIGA 180

Query: 178 GIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           GIF    M          +TATS  +  + A    +V    G     + P   G V +G 
Sbjct: 181 GIFKVPAMDQIMRIPFKASTATSNFMIGVTAASGAVVYFARG----DVKPMITGPVVLGV 236

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +L           L  KL   +    +   F  I+  T+F  
Sbjct: 237 LLG--------AVLGAKLMVRLKTSTIRKLFIPIIIYTAFEM 270



 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 48/118 (40%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++  + SG  +GL G+G G+  VP + +  +       I    +  TS  +I  T+    
Sbjct: 163 LIIMYFSGIAAGLLGIGAGIFKVPAMDQIMR-------IPFKASTATSNFMIGVTAASGA 215

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +   G +   I    +  + +  V+ + ++  +  S + K F    +     M+ R
Sbjct: 216 VVYFARGDVKPMITGPVVLGVLLGAVLGAKLMVRLKTSTIRKLFIPIIIYTAFEMIYR 273


>gi|307720983|ref|YP_003892123.1| hypothetical protein Saut_1062 [Sulfurimonas autotrophica DSM
           16294]
 gi|306979076|gb|ADN09111.1| protein of unknown function DUF81 [Sulfurimonas autotrophica DSM
           16294]
          Length = 243

 Score = 85.1 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 82/194 (42%), Gaps = 9/194 (4%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I+     G LSGLFG+GGG ++VP+L                +A+G S+  +  +S+  
Sbjct: 4   LILLGASVGLLSGLFGIGGGTILVPLLLIL--------GYETKIAIGISVVQMVFSSIYG 55

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              + + GT+++ ++           +++  + S      L   F  F     + +  + 
Sbjct: 56  SYLNNKKGTLDVVMVVIIGLGGFCGALLSGSITSSFSDKTLEMVFFTFATFALLRLFMKT 115

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSA 204
             Y   K  +  V ++ G VTG +S A+GVGG +    +++ F    + KAT+       
Sbjct: 116 HDYKHEKKINKAVLFVIGFVTGAISMAIGVGGSLILVPILVGFLHVPLKKATSAGLFFVV 175

Query: 205 LIAFPALLVRIYSG 218
             +   L+     G
Sbjct: 176 FSSVSGLISHTLHG 189



 Score = 41.6 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 7/98 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ V  F++G +S   GVGG L++VP+L            + +  A    L  +  +SV
Sbjct: 127 AVLFVIGFVTGAISMAIGVGGSLILVPILVGFLH-------VPLKKATSAGLFFVVFSSV 179

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV 121
              + H  HG ++ +          +       +  H+
Sbjct: 180 SGLISHTLHGHVDYESGIIIGLASLVGVYTGVHLKHHI 217


>gi|228906533|ref|ZP_04070409.1| hypothetical protein bthur0013_7100 [Bacillus thuringiensis IBL
           200]
 gi|228853082|gb|EEM97860.1| hypothetical protein bthur0013_7100 [Bacillus thuringiensis IBL
           200]
          Length = 235

 Score = 85.1 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 92/241 (38%), Gaps = 14/241 (5%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           + G+GG ++  P++     L+G       H   G +   +   +      +R+   ++  
Sbjct: 1   MVGIGGAIINYPMILYIPALLGF-AGYTSHEVSGITAVQVFFATFAGAWVYRKSNDMDKT 59

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV 158
           ++      + I + + S   + +++  +N  + +   +  ++M    +        + ++
Sbjct: 60  LVVYMGASILIGSFIGSFSANLLNEHAVNVVYTVLATIAAMMMFVPKKNNSGAVNYNKWL 119

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYS 217
             +   + G +SG +G GG      +ML      +    ATS  ++ + +      ++ +
Sbjct: 120 ASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKLPLRMTIATSIAITFISSVGITTGKVIT 179

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G             V +   LII   SI   PL  ++   I +K L    S+++  T+  
Sbjct: 180 GQ------------VVVIPALIIAAASIFAAPLGARVGKRINQKVLQYMLSILIVGTAVK 227

Query: 278 F 278
            
Sbjct: 228 M 228



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V +F+ G +SG+ G GG  ++VP++    +L        + + + TS+ +   +SV
Sbjct: 118 WLASVLAFIVGGVSGIIGAGGAFLLVPIMLVILKL-------PLRMTIATSIAITFISSV 170

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G + +               + + +   +++  L    +I  +   + M  
Sbjct: 171 GITTGKVITGQVVVIPALIIAAASIFAAPLGARVGKRINQKVLQYMLSILIVGTAVKMWI 230

Query: 144 R 144
            
Sbjct: 231 D 231


>gi|315658763|ref|ZP_07911632.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590]
 gi|315496218|gb|EFU84544.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590]
          Length = 275

 Score = 85.1 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 55/280 (19%), Positives = 114/280 (40%), Gaps = 33/280 (11%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +V     +I+   LS  +  L G+GGG+++VP L        +   I   +A+GTS  ++
Sbjct: 1   MVLTFIFLILIGLLSAVIGSLVGIGGGIIIVPTLVYLGVEHHLLHGITPQIAIGTSSVIL 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T + S + + +   +++K    ++F L   ++  SL+  ++     N  F IF +L+ 
Sbjct: 61  IVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLAGSLLSRYLTLESFNLYFGIFMILVS 120

Query: 139 ILMLKRDRLYCERKFPD--------------------NYVKYIWGMVTGFLSGALGVGGG 178
           I+++ R ++   + F                        V ++  +  G L+G  G+GGG
Sbjct: 121 IILMVRHKIKPIKLFDKPQYRKSYTDSEGVTYHYSVPPLVAFVATLFIGVLTGLFGIGGG 180

Query: 179 IFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
                LML  +    + A  TS  +    +  + +  I+             G V  G  
Sbjct: 181 ALMTPLMLIVFRFPPHVAVGTSMMMIFFSSVMSSIGHIFQ------------GHVAWGYS 228

Query: 238 LIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           +I++  S +   +  K+++ I  + + +    +M      
Sbjct: 229 IILIISSYIGAQIGVKINHSIKSETVVMLLRTVMLFMGIY 268



 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 7/122 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  VA+   G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SV
Sbjct: 159 LVAFVATLFIGVLTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSV 211

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           MS + H   G +        I    I   +   +   +    +        L MGI ++ 
Sbjct: 212 MSSIGHIFQGHVAWGYSIILIISSYIGAQIGVKINHSIKSETVVMLLRTVMLFMGIYLIF 271

Query: 144 RD 145
           + 
Sbjct: 272 KS 273


>gi|73663161|ref|YP_301942.1| permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
 gi|72495676|dbj|BAE18997.1| putative permease [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 274

 Score = 85.1 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 96/253 (37%), Gaps = 33/253 (13%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP +        +   I   +A+GTS  ++  T + S + + +   +++K    ++F
Sbjct: 27  IIIVPTIVYLGVDNDLLHGITPQIAIGTSSVILIVTGLSSTLGYLKTKQVDVKNGSIFLF 86

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD---------- 155
            L   +++ S++  ++     N  F IF +L+ IL++ R+++   + F            
Sbjct: 87  GLLPGSLIGSIISRYLTLESFNLYFGIFLILVAILLMVRNKIKPLKVFAKPQYEKTYVDG 146

Query: 156 ----------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSA 204
                       V ++  +  G L+G  G+GGG     LML  +    + A  TS  +  
Sbjct: 147 HGETYHYHVPPLVAFVATLFIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIF 206

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
             +  +    I              G V  G  +I++  S     L  K++  I    + 
Sbjct: 207 FSSVVSSAGHIVQ------------GHVAWGYAIILIIASYFGAKLGVKINRSIQSNTVV 254

Query: 265 IGFSMIMFTTSFV 277
                +M      
Sbjct: 255 TLLRAVMLIMGIY 267


>gi|118477008|ref|YP_894159.1| hypothetical protein BALH_1307 [Bacillus thuringiensis str. Al
           Hakam]
 gi|118416233|gb|ABK84652.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 281

 Score = 85.1 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 62/294 (21%), Positives = 124/294 (42%), Gaps = 41/294 (13%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           +YN   + ++ +  +++YI L+ +   ++GT+  L G+GGG+++VP+L           S
Sbjct: 1   MYNNWWISYIEELSILEYIMLLFI-GLIAGTVGSLVGLGGGIIIVPLLIGL-------HS 52

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +   +A+GTS+  +  T + S + + +H  ++ K             ++ S     +++ 
Sbjct: 53  LSPQLAVGTSMVTVVFTGLSSTLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQD 112

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYC---------ERKFPDNYVKYI-----------WGM 164
             +  F IF + + IL++ RD+L           +R F DN    +              
Sbjct: 113 TFSLYFGIFLIFVSILLMLRDKLKPLSLSNMTVIKRSFTDNEGNTVHYQFPPLLAIFIAF 172

Query: 165 VTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           + GF+SG  G+GGG      +ML +    + A ATS  +  L A  +    I        
Sbjct: 173 IVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATSMFIVFLSAIVSSATHI-------- 224

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               SLG V+    LI++P + +   +   ++  +  K +     + +      
Sbjct: 225 ----SLGNVSWIYALILIPGAWIGGKIGAYINTKLSGKAVINLLRITLIILGTR 274


>gi|262276252|ref|ZP_06054061.1| hypothetical protein VHA_003237 [Grimontia hollisae CIP 101886]
 gi|262220060|gb|EEY71376.1| hypothetical protein VHA_003237 [Grimontia hollisae CIP 101886]
          Length = 257

 Score = 85.1 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 99/266 (37%), Gaps = 28/266 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + I ++ + +F +G +  + G GGG++ VP L            +  H+A+GT+      
Sbjct: 8   NTIIILGLVAFAAGFIDAVAG-GGGMLTVPALLSI--------GLPPHIALGTNKLSATF 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + + + R    + +          I  V  +L++ ++   +L KA  +  L   + 
Sbjct: 59  ASSTAALTYYRKKLFSPRFWSHAFLATLIGAVFGTLVVDYISTDWLEKALPLVVLATAVY 118

Query: 141 MLKRDRLYCERKFPDNYV------KYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIY 193
            L   +   E     N V      ++  G   GF  G  G G G F T   M  Y  +I 
Sbjct: 119 TLWHPQPKAESHSLPNDVPNLKKKQWGQGFTLGFYDGVAGPGTGAFWTVSSMSMYKMNIL 178

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            ++  +  ++    F +L+  I             LG VN    L +    ++   +   
Sbjct: 179 LSSGLAKAMNFTSNFTSLVTFII------------LGHVNWSIGLTMGACLMVGAYIGAH 226

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +   G K++   F  ++   S   A
Sbjct: 227 SAIRFGAKFIRPVFVSVVMVLSVKLA 252


>gi|284053233|ref|ZP_06383443.1| hypothetical protein AplaP_17354 [Arthrospira platensis str.
           Paraca]
 gi|291565874|dbj|BAI88146.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 270

 Score = 84.7 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 24/212 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + +A   +G L+G  G+GGG V+VP+L               + A+ TS+  +  T+
Sbjct: 13  LLTLAIAGLFAGILAGFLGIGGGTVLVPILVTL--------GYVSNQAVATSIFSVLITA 64

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM- 141
           +   +++ R G + +K +    F   IT ++ S + + +  S+L   F    LL   L+ 
Sbjct: 65  ISGSIQNWRMGFLRVKRVILIGFPAVITAIIGSYLANLLPSSWLLFGFGCLLLLNIYLIK 124

Query: 142 --------------LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL-ML 186
                         L       ++         I G + G L+G  GVGGG+    L +L
Sbjct: 125 VRQDIIAKKQLDEQLNSTSPQPQKTMNPYLAFMITGSLAGLLAGLFGVGGGVIIVPLQIL 184

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             G +I  +  TS GV  + A  A +     G
Sbjct: 185 LLGETIKVSIQTSLGVIIITAASACIGHAIQG 216



 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 7/129 (5%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
               ++     ++   L+G L+GLFGVGGG+++VP+               + V++ TSL
Sbjct: 146 PQKTMNPYLAFMITGSLAGLLAGLFGVGGGVIIVPLQILLL-------GETIKVSIQTSL 198

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
           GVI  T+  + + H   G +             +   +++  +  +    +  AF     
Sbjct: 199 GVIIITAASACIGHAIQGNVLWIQGMMLGLGGLVGVQISTRFLPKLPDRIVTLAFRTLLG 258

Query: 136 LMGILMLKR 144
           ++ I M  R
Sbjct: 259 ILSIYMFWR 267


>gi|17548411|ref|NP_521751.1| hypothetical protein RS04702 [Ralstonia solanacearum GMI1000]
 gi|17430658|emb|CAD17341.1| probable permease transmembrane protein [Ralstonia solanacearum
           GMI1000]
          Length = 263

 Score = 84.7 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 89/235 (37%), Gaps = 25/235 (10%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            ++G    +  H+A GT+L +IAP  ++ F+ + +   ++++ +     V   +T V + 
Sbjct: 36  PILGYLYGMDQHLAQGTALVMIAPNVLIGFLRYHQRHPVHLRSVATLCAVAMASTYVAAR 95

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDR------LYCERKFPDNY------VKYIWGM 164
             + +D   L  AFA F +++ +    + R             P            + G+
Sbjct: 96  FAAGLDADHLRTAFAWFLIVLAVYFALQLRDRPHAEPAAAHPEPGAPRAMPPAAIALLGI 155

Query: 165 VTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            +G +SG   VGGG+     L+  +G S  +A   +  +    +  AL    ++      
Sbjct: 156 ASGGMSGIFTVGGGLVVVPALVTLFGMSQTRAQGMALALVVPGSLIALATYAHA------ 209

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 G V+ G  + +    +        L++      L + F  ++   +   
Sbjct: 210 ------GHVSWGTGIPLALGGMASVSWGVALAHRFSPMRLRLVFCAVLVGAAAAM 258



 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 43/119 (36%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I +    SG +SG+F VGGGLV+VP L   F        +    A G +L ++ P S+
Sbjct: 148 AAIALLGIASGGMSGIFTVGGGLVVVPALVTLF-------GMSQTRAQGMALALVVPGSL 200

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++   +   G ++             +      +        L   F    +     ML
Sbjct: 201 IALATYAHAGHVSWGTGIPLALGGMASVSWGVALAHRFSPMRLRLVFCAVLVGAAAAML 259


>gi|120402827|ref|YP_952656.1| hypothetical protein Mvan_1828 [Mycobacterium vanbaalenii PYR-1]
 gi|119955645|gb|ABM12650.1| protein of unknown function DUF81 [Mycobacterium vanbaalenii PYR-1]
          Length = 291

 Score = 84.7 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 54/260 (20%), Positives = 94/260 (36%), Gaps = 23/260 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L I  +   G   GL G GG ++ VP+L+           +    A+ TSL V+  T
Sbjct: 1   MIALTIGLAVFVGIALGLLGGGGSILTVPLLAYV-------AGMDAKAAIATSLLVVGVT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S +  + H R G +  +    +            L+  ++  + L   FA+  +   I M
Sbjct: 54  SAIGAISHARAGRVQWRTGLIFGAAGMAGAYAGGLLARYIPGTILLIGFAVMMIATAIAM 113

Query: 142 LKRDR---LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATA 197
           L+  +                   G++ G ++G +G GGG      +    G  +  A  
Sbjct: 114 LRGRKTIETGETGHRLPVPKIVAEGLIVGLVTGLVGAGGGFLVVPALALLGGLPMPIAVG 173

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS  V A+ +F  L   + S              +N    L +   +++   +  +L+ M
Sbjct: 174 TSLIVIAMKSFAGLAGYLTSV------------HINWTLALAVTAAAVIGALIGARLTAM 221

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           I    L   F   +   S V
Sbjct: 222 INPDSLRKTFGWFVLVMSSV 241



 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 7/120 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I+    + G ++GL G GGG ++VP L+           + M +A+GTSL VIA  S   
Sbjct: 134 IVAEGLIVGLVTGLVGAGGGFLVVPALALL-------GGLPMPIAVGTSLIVIAMKSFAG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +     IN  +         I  ++ + + + ++   L K F  F L+M  ++L ++
Sbjct: 187 LAGYLTSVHINWTLALAVTAAAVIGALIGARLTAMINPDSLRKTFGWFVLVMSSVILAQE 246


>gi|225352706|ref|ZP_03743729.1| hypothetical protein BIFPSEUDO_04335 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156671|gb|EEG70065.1| hypothetical protein BIFPSEUDO_04335 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 308

 Score = 84.7 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 100/255 (39%), Gaps = 16/255 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++++     G LSG+FG+GGG V+VP L            +    A  TS+  I PTS
Sbjct: 54  IAVLVIVGVAVGLLSGMFGIGGGTVIVPALVWL--------GLTQRNAAATSMLAIVPTS 105

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   + +   G ++          + +   + S ++S + +  L   F +F + + +  +
Sbjct: 106 ISGVISYATCGNVDWLAALLLFCGMFVGGQIGSWLLSRLPELVLRWIFVVFLVFVVVNQI 165

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
                      P          +TG     LGV  GI   LL +  GA    A +   G 
Sbjct: 166 SF--------VPSRDQHIAMSALTGVCLVLLGVVIGILAGLLGIGGGALAVPALSMLFGA 217

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
           S LIA    L+ ++       +       V++ A LII  ++ +  P  T ++  +  + 
Sbjct: 218 SDLIARGTSLLAMFPNSITTSVANLKRRLVHVKAALIIGLVAAVTAPFGTWIAGAVSPRV 277

Query: 263 LTIGFSMIMFTTSFV 277
            +I F+  +      
Sbjct: 278 GSILFACYLCVLLIR 292



 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 43/127 (33%), Gaps = 12/127 (9%)

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
              +   D    +       V  I G+  G LSG  G+GGG      +++ G +   A A
Sbjct: 36  ADRLFGADPAGLDESARGIAVLVIVGVAVGLLSGMFGIGGGTVIVPALVWLGLTQRNAAA 95

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS       +   ++               + G V+  A L++     +   + + L   
Sbjct: 96  TSMLAIVPTSISGVISYA------------TCGNVDWLAALLLFCGMFVGGQIGSWLLSR 143

Query: 258 IGKKYLT 264
           + +  L 
Sbjct: 144 LPELVLR 150



 Score = 42.4 bits (99), Expect = 0.064,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 7/95 (7%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP LS  F    +       +A GTSL  + P S+ + + + +   +++K       V  
Sbjct: 208 VPALSMLFGASDL-------IARGTSLLAMFPNSITTSVANLKRRLVHVKAALIIGLVAA 260

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +T    + +   V     +  FA +  ++ I  L 
Sbjct: 261 VTAPFGTWIAGAVSPRVGSILFACYLCVLLIRSLF 295


>gi|145641909|ref|ZP_01797483.1| hypothetical protein CGSHiR3021_11329 [Haemophilus influenzae
           R3021]
 gi|145273388|gb|EDK13260.1| hypothetical protein CGSHiR3021_11329 [Haemophilus influenzae
           22.4-21]
          Length = 117

 Score = 84.7 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 43/99 (43%)

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
           F    +   G +I +A  +SA    L+    +   I SGWG   +P +SLG++ + AVL 
Sbjct: 16  FIVPFLTARGINIKQAIGSSAFCGMLLGISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLG 75

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           I   S   + L    +  +    L  GF++ +   +   
Sbjct: 76  ITATSFFTSKLGASATSKLPVSTLKKGFALFLIVVAINM 114


>gi|291297223|ref|YP_003508621.1| hypothetical protein Mrub_2854 [Meiothermus ruber DSM 1279]
 gi|290472182|gb|ADD29601.1| protein of unknown function DUF81 [Meiothermus ruber DSM 1279]
          Length = 254

 Score = 84.7 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 101/255 (39%), Gaps = 17/255 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L  + + L G   G+ G GG ++ VP+L                +A+  SL ++   +
Sbjct: 1   MLLAWMGAILIGLALGMLGSGGSILTVPILVYLV-------GEPDKLAIAESLAIVGLIA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++  + +     I+ + +  +       T + +     V   +    FA+  LL   +M 
Sbjct: 54  LVGAIPYALKAQIDWRNVLFFGLPGMAGTYLGAYFSRWVPGVWQLGLFAVVMLLAAYMMF 113

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAG 201
           +  RL    +        + G+V G L+G +GVGGG      ++   G  ++ A  TS  
Sbjct: 114 RPPRLEAPTQKRSYLKIVLDGLVVGILTGLVGVGGGFLIVPALVLLGGLPMHLAVGTSLL 173

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGF-VNIGAVLIILPISILITPLATKLSYMIGK 260
           + A+ +       ++       LP    G+ V+   VLI   + I+ +    +L+  + +
Sbjct: 174 IVAMKSGSGFYKYLHL------LPEQ--GYTVHWDIVLIFAALGIVGSLFGGRLAASLPQ 225

Query: 261 KYLTIGFSMIMFTTS 275
             L  GF+  +    
Sbjct: 226 PTLRRGFAGFLVVMG 240



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 12/129 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I++   + G L+GL GVGGG ++VP L            + MH+A+GTSL ++A  S   
Sbjct: 130 IVLDGLVVGILTGLVGVGGGFLIVPALVLL-------GGLPMHLAVGTSLLIVAMKSGSG 182

Query: 86  FMEHR-----RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           F ++      +  T++  I+  +  +  + ++    + + + +  L + FA F ++MG+ 
Sbjct: 183 FYKYLHLLPEQGYTVHWDIVLIFAALGIVGSLFGGRLAASLPQPTLRRGFAGFLVVMGVF 242

Query: 141 MLKRDRLYC 149
           +L ++    
Sbjct: 243 ILWQNLPRV 251


>gi|153953330|ref|YP_001394095.1| hypothetical protein CKL_0694 [Clostridium kluyveri DSM 555]
 gi|146346211|gb|EDK32747.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
          Length = 278

 Score = 84.7 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/286 (18%), Positives = 96/286 (33%), Gaps = 48/286 (16%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  I + S ++G +  + G+GGG V+ P L+  F        I +  A+G SL  +  T
Sbjct: 4   LILQIFIISIVAGIVGSILGLGGGTVITPALTILF-------GIDIKYAIGASLISVIAT 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  S + + R    N++I         +  +  + +   ++  +L   F I  L     M
Sbjct: 57  SSGSAVAYIRDKLTNIRIGMFLEIATTLGAITGAFLGGIINPYYLYFLFGILLLYSAFAM 116

Query: 142 LKRDRLYCER----------------------------KFPDNYVKYIWGMVTGFLSGAL 173
            K+ R+                                K       +      G +SG L
Sbjct: 117 FKKGRMESTEIIETHPLAEKLKLNGQYHDKFLNEDISYKVSGVPSGFGVMYGAGIISGLL 176

Query: 174 GVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G G F  + M LF    +  ++ATS  +  + A  +  + +  G     +        
Sbjct: 177 GIGSGSFKVMAMDLFMKLPLKVSSATSNFMMGVTATASAGIYLLRGDIDPKIS------- 229

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                  +    +L   +  K+   +  K +   F   +   S   
Sbjct: 230 -----APVALGVLLGATIGVKIMENMKSKTIRKIFVPFLIYISIQM 270



 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G +SGL G+G G       S     M +   + + V+  TS  ++  T+  S   +   
Sbjct: 169 AGIISGLLGIGSG-------SFKVMAMDLFMKLPLKVSSATSNFMMGVTATASAGIYLLR 221

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           G I+ KI       + +   +   ++ ++    + K F  F + + I M+ +
Sbjct: 222 GDIDPKISAPVALGVLLGATIGVKIMENMKSKTIRKIFVPFLIYISIQMILK 273


>gi|21322817|dbj|BAB97446.1| Hypothetical membrane protein [Corynebacterium glutamicum ATCC
           13032]
          Length = 263

 Score = 84.7 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 91/228 (39%), Gaps = 20/228 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L+           +    A+  SL ++  TS++S + H R+G +  K    +     
Sbjct: 46  VPILTYV-------AGLEPREAIAASLFIVGTTSLVSAISHARNGRVRWKTGLLFGAAGM 98

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           +      ++  ++  + L  AFA+  +     ML+  +          +   + G+V G 
Sbjct: 99  VGAFGGGVLGGYIPGTILMIAFALMMIATSTAMLRGRKQKKGASKSSLWRVLVDGLVVGA 158

Query: 169 LSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           ++G +G GGG      +    G S+  A  TS  V  + +F  L   + S          
Sbjct: 159 VTGLVGAGGGFLVVPALALLGGLSMPVAVGTSLVVITMKSFAGLAGYLTSVQ-------- 210

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
               ++ G VL++   +I+ +   ++L+  + +  L  GF + +    
Sbjct: 211 ----LDWGLVLMVTAAAIVGSLAGSRLAGRVPETLLRKGFGVFVLVMG 254



 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 7/120 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++V   + G ++GL G GGG ++VP L+           + M VA+GTSL VI   S
Sbjct: 146 LWRVLVDGLVVGAVTGLVGAGGGFLVVPALALL-------GGLSMPVAVGTSLVVITMKS 198

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                 +     ++  ++        + ++  S +   V ++ L K F +F L+MG+ +L
Sbjct: 199 FAGLAGYLTSVQLDWGLVLMVTAAAIVGSLAGSRLAGRVPETLLRKGFGVFVLVMGVFVL 258


>gi|302559636|ref|ZP_07311978.1| membrane protein [Streptomyces griseoflavus Tu4000]
 gi|302477254|gb|EFL40347.1| membrane protein [Streptomyces griseoflavus Tu4000]
          Length = 289

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 83/232 (35%), Gaps = 25/232 (10%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L            +    A+ TSL V+  TS +  + H R G +  +    +     
Sbjct: 32  VPLLVYV-------AGMDAKEAIATSLFVVGVTSAVGMINHARGGRVRWRTGVLFGAAGM 84

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR----LYCERKFPDNYVKYIWGM 164
                  L+  H+  + L  AFA+  ++    ML+  R        R+ P   V  + G 
Sbjct: 85  AGAYTGGLVGGHIPDAVLLVAFAVMMIVTAAAMLRGRRDPGSDRAHRQLPVGRVL-LDGA 143

Query: 165 VTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
             G  +G +G GGG      +    G S+  A  TS  V A+ +       + S      
Sbjct: 144 AVGLATGLVGAGGGFLVVPALALLGGLSMPVAIGTSLLVIAMKSAAGFAGYLSSVQ---- 199

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                   ++ G  L +   +++ +    +L+  +    L+  F+  +    
Sbjct: 200 --------IDWGLTLAVTGFAVVGSLAGARLAGRVPADVLSRLFAWFVLAMG 243



 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 7/122 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++     G  +GL G GGG ++VP L+           + M VA+GTSL VIA  S   
Sbjct: 138 VLLDGAAVGLATGLVGAGGGFLVVPALALL-------GGLSMPVAIGTSLLVIAMKSAAG 190

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           F  +     I+  +         + ++  + +   V    L++ FA F L MG  +L + 
Sbjct: 191 FAGYLSSVQIDWGLTLAVTGFAVVGSLAGARLAGRVPADVLSRLFAWFVLAMGTFVLVQQ 250

Query: 146 RL 147
             
Sbjct: 251 AP 252


>gi|187926093|ref|YP_001892438.1| protein of unknown function DUF81 [Ralstonia pickettii 12J]
 gi|241665581|ref|YP_002983940.1| hypothetical protein Rpic12D_4018 [Ralstonia pickettii 12D]
 gi|187727847|gb|ACD29011.1| protein of unknown function DUF81 [Ralstonia pickettii 12J]
 gi|240867608|gb|ACS65268.1| protein of unknown function DUF81 [Ralstonia pickettii 12D]
          Length = 260

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 92/231 (39%), Gaps = 21/231 (9%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            L+G    +  H+A GT+L +IAP  ++ F  + +   ++++ +          T V + 
Sbjct: 36  PLLGYLYGMDQHLAQGTALVMIAPNVLIGFWRYHQRHPVHVRSVALICVFSMGATYVAAR 95

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE--------RKFPDNYVKYIWGMVTGF 168
             + +D + L+ AFA+F +++ +    + +                      + G+ +G 
Sbjct: 96  FAAGLDANLLHTAFAVFLIVLAVYFASQLKEKPNAAGAAHAVPHTMPAAALPLMGIASGA 155

Query: 169 LSGALGVGGGIFTN-LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           +SG   VGGG+     L+ F+G    +A   +  +    +  AL    ++          
Sbjct: 156 MSGIFTVGGGLVVVSALVTFFGMPQTRAQGMALALVVPGSLIALAAYAHA---------- 205

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             G V+ G  + +    ++       L+Y    + L + F  ++  T+ + 
Sbjct: 206 --GHVDWGTGIPLAAGGVVSVSWGVALAYRFSARRLRLAFCAVLLGTALMM 254



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + +    SG +SG+F VGGGLV+V  L   F   G+  +    +A    L ++ P S+
Sbjct: 144 AALPLMGIASGAMSGIFTVGGGLVVVSALVTFF---GMPQTRAQGMA----LALVVPGSL 196

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++   +   G ++            ++      +        L  AF    L   ++ML 
Sbjct: 197 IALAAYAHAGHVDWGTGIPLAAGGVVSVSWGVALAYRFSARRLRLAFCAVLLGTALMMLL 256


>gi|297566927|ref|YP_003685899.1| hypothetical protein Mesil_2541 [Meiothermus silvanus DSM 9946]
 gi|296851376|gb|ADH64391.1| protein of unknown function DUF81 [Meiothermus silvanus DSM 9946]
          Length = 258

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 78/218 (35%), Gaps = 17/218 (7%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +  H A  TSL  +  + +     +   G ++       I    I     +L  + + + 
Sbjct: 37  LSQHRATATSLVAVVFSGLTGAFTYATQGAVDWVAALFIIPTAMIGARAGALFANQLSEW 96

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI----WGMVTGFLSGALGVGGGIF 180
            L + F  + + + +L++ +  +    +    +++ +     G++ GF SG LGVGGG  
Sbjct: 97  RLKRIFGWYLVAVALLLILKPYIPHVGEPVQGWLRVLPMGTAGVLAGFASGLLGVGGGTI 156

Query: 181 TNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
              +++   G   + A  TS       A          G     +            V  
Sbjct: 157 IVPILVLLAGLEQHVAQGTSLLAMIPSALVGSYTHYKHGNLAQEV------------VAG 204

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           ++   I        ++  + + +L + F+ ++  T+  
Sbjct: 205 LVIGIIGGAFAGGLVANQLPEFWLRVIFAAVLIWTATR 242



 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 7/124 (5%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A  L+G  SGL GVGGG ++VP+L            +  HVA GTSL  + P++++    
Sbjct: 138 AGVLAGFASGLLGVGGGTIIVPILVLL-------AGLEQHVAQGTSLLAMIPSALVGSYT 190

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
           H +HG +  +++   +  +        L+ + + + +L   FA   +      L+     
Sbjct: 191 HYKHGNLAQEVVAGLVIGIIGGAFAGGLVANQLPEFWLRVIFAAVLIWTATRNLRGKPKP 250

Query: 149 CERK 152
            E  
Sbjct: 251 LEAH 254



 Score = 42.4 bits (99), Expect = 0.076,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 29/89 (32%), Gaps = 13/89 (14%)

Query: 181 TNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
              LM+ F   S ++ATATS                            + G V+  A L 
Sbjct: 27  AVPLMVSFLKLSQHRATATSLVAVVFSGLTGAFTYA------------TQGAVDWVAALF 74

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFS 268
           I+P +++        +  + +  L   F 
Sbjct: 75  IIPTAMIGARAGALFANQLSEWRLKRIFG 103


>gi|145629983|ref|ZP_01785765.1| hypothetical protein CGSHi22421_08028 [Haemophilus influenzae
           R3021]
 gi|144984264|gb|EDJ91687.1| hypothetical protein CGSHi22421_08028 [Haemophilus influenzae
           R3021]
          Length = 117

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 43/99 (43%)

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
           F    +   G +I +A  +SA    L+    +   I SGWG   +P +SLG++ + AVL 
Sbjct: 16  FIVPFLTARGINIKQAIGSSAFCGMLLGISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLG 75

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           I   S   + L    +  +    L  GF++ +   +   
Sbjct: 76  ITATSFFTSKLGASATAKLPVSTLKKGFALFLIVVAINM 114


>gi|228474294|ref|ZP_04059029.1| putative membrane protein [Staphylococcus hominis SK119]
 gi|314936856|ref|ZP_07844203.1| putative membrane protein [Staphylococcus hominis subsp. hominis
           C80]
 gi|228271653|gb|EEK13000.1| putative membrane protein [Staphylococcus hominis SK119]
 gi|313655475|gb|EFS19220.1| putative membrane protein [Staphylococcus hominis subsp. hominis
           C80]
          Length = 275

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 110/276 (39%), Gaps = 33/276 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+++   LS  L  L G+GGG+++VP L        +   I   +A+GTS  ++  T 
Sbjct: 5   MILLVLIGLLSAVLGSLVGIGGGIIIVPTLVYLGVNHHLLHGITTQIAIGTSSVILIVTG 64

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S + + +   +++K    ++F L   +++ S +  ++  +  N  F IF + + IL++
Sbjct: 65  LSSSVGYLKTKQVDIKNGSIFLFGLLPGSLIGSFLSRYLTLNSFNLYFGIFMICVSILLM 124

Query: 143 KRDRLYCERKFPD--------------------NYVKYIWGMVTGFLSGALGVGGGIFTN 182
            R ++   + F                          +   +  G L+G  G+GGG    
Sbjct: 125 IRHKIKPFKIFDKEKYRKTYIDAKGMTYHYSVPPMFAFFATLFIGVLTGLFGIGGGALMT 184

Query: 183 LLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
            LML  +    + A  TS  +    +  + +  I              G V     +I++
Sbjct: 185 PLMLIVFRFPPHVAVGTSMMMIFFSSVMSSIGHIIQ------------GHVAWSYSIILI 232

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             S +   +  K+++ I  + + +    +M      
Sbjct: 233 ISSYIGAQIGVKINHSIKSETVVLLLRTVMLIMGVY 268


>gi|224372349|ref|YP_002606721.1| protein of unknown function DUF81 [Nautilia profundicola AmH]
 gi|223589426|gb|ACM93162.1| protein of unknown function DUF81 [Nautilia profundicola AmH]
          Length = 246

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 85/241 (35%), Gaps = 21/241 (8%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G  SG FG+GGG V+VPVL                 A+G S+  +  +SV   
Sbjct: 5   VIIGIFVGFASGFFGIGGGTVLVPVLLFL--------GFGFKEAIGISVTQMMLSSVYGS 56

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             + + G + +K          +   ++  ++ H  K  L   F     +  +       
Sbjct: 57  YLNYKKGLLKIKNGLSLAIGGALGASLSGYIVKHTSKEILGFIFLTLVFIAIVRFFITVP 116

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSAL 205
              +    DN   +  G+  G ++ ++GVGG I    +++ F    +    + S      
Sbjct: 117 EPKDEPPIDNKKLFFIGLFVGMIAISVGVGGAILITPILVGFLHYRLKTTVSLSLFFVVF 176

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
            +    +        L G   +S GF        I   S++ T    +L + +  K+   
Sbjct: 177 SSISGFIS-----QSLAGHIDYSKGF-------TIGLASLIGTYFGIRLYHAMSPKHHKK 224

Query: 266 G 266
            
Sbjct: 225 F 225



 Score = 39.3 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 36/112 (32%), Gaps = 7/112 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +       G ++   GVGG +++ P+L              +   +  SL  +  +S+  
Sbjct: 129 LFFIGLFVGMIAISVGVGGAILITPILVGFLHY-------RLKTTVSLSLFFVVFSSISG 181

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           F+     G I+            I T     +   +      K   ++ + +
Sbjct: 182 FISQSLAGHIDYSKGFTIGLASLIGTYFGIRLYHAMSPKHHKKFLLVWYIFV 233


>gi|261600785|gb|ACX90388.1| protein of unknown function DUF81 [Sulfolobus solfataricus 98/2]
          Length = 293

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 91/263 (34%), Gaps = 31/263 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPV-LSKAFQLMGIDDS-----ICMHVAMGTSLGV 77
            L I++  L G   GL G GG ++ +P+ L       GI           H+ +GT+   
Sbjct: 17  LLSIISGILVGFSLGLIGGGGSILAIPLQLYFVGLANGIPPGSPEYTYITHLTLGTTALA 76

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +   S ++   H R G + +     +     I  V+ + +   +  + +   F    + +
Sbjct: 77  VGLNSYINSYMHFRRGNVRVPEGIIFTIPGVIGDVIGAYLSHLMSGALILFLFGFLMIAV 136

Query: 138 GILMLK------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
            I M +                   R+          G + GF SG  G+GGG      +
Sbjct: 137 AIRMWRSKCNPNRSVLYNNSHKLSLRERIKVTKVIPAGFLVGFASGYFGIGGGFLVVPGL 196

Query: 186 LFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           LF  G  + +A  TS          A +                 G+V+I   L+ L   
Sbjct: 197 LFSTGLDMLRAVGTSLIAVGTFGVTAAITYAVY------------GYVDIVISLLYLLGG 244

Query: 245 ILITPLATKLSYMIGKKYLTIGF 267
           ++     + ++  + ++ L   F
Sbjct: 245 VVGGYTGSTIASRMPRQTLRKLF 267



 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 7/125 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +I A FL G  SG FG+GGG ++VP L            + M  A+GTSL  +    
Sbjct: 167 VTKVIPAGFLVGFASGYFGIGGGFLVVPGLLF-------STGLDMLRAVGTSLIAVGTFG 219

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V + + +  +G +++ I   ++    +     S + S + +  L K FAI  +++ I  +
Sbjct: 220 VTAAITYAVYGYVDIVISLLYLLGGVVGGYTGSTIASRMPRQTLRKLFAIIIIVVAIYTM 279

Query: 143 KRDRL 147
             +R+
Sbjct: 280 YINRV 284


>gi|314933135|ref|ZP_07840500.1| putative membrane protein [Staphylococcus caprae C87]
 gi|313653285|gb|EFS17042.1| putative membrane protein [Staphylococcus caprae C87]
          Length = 275

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 86/230 (37%), Gaps = 33/230 (14%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L        +   I   +A+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTLVYLGVNHHLLHGITPQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            +++ S +   +     N  F IF + + IL++ R ++   + F                
Sbjct: 92  GSLIGSFLSQFLTLDSFNLYFGIFMICVAILLMVRHKIKPFKIFDKPQYERTYVDAEGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                     ++  +  G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YHYSVPPLFAFVATLFIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
            + +  I              G V  G  + ++  SI+   +  K++  +
Sbjct: 212 MSSVGHIVQ------------GHVAWGYSVALIISSIIGAQIGVKVNRSL 249



 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 7/122 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
               VA+   G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SV
Sbjct: 159 LFAFVATLFIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSV 211

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           MS + H   G +        I    I   +   +   +    +        LL+G  ++ 
Sbjct: 212 MSSVGHIVQGHVAWGYSVALIISSIIGAQIGVKVNRSLKSDTVVMLLRTVMLLLGAYLII 271

Query: 144 RD 145
           + 
Sbjct: 272 KS 273


>gi|319947833|ref|ZP_08022022.1| hypothetical protein ES5_00862 [Dietzia cinnamea P4]
 gi|319438503|gb|EFV93434.1| hypothetical protein ES5_00862 [Dietzia cinnamea P4]
          Length = 296

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 90/232 (38%), Gaps = 23/232 (9%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L+           +    A+ TSL V+  TS++S + H R G +  +    +     
Sbjct: 31  VPLLTYI-------GGLDPREAIATSLFVVGATSLVSLIGHARKGNVQWRTGLIFGAAGM 83

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW---GMV 165
           +   +  L   ++  + L  AFA+  +     M+K  +    +    ++  +     G+V
Sbjct: 84  VGAFLGGLAGGYIPGTLLMIAFALMMIATAGAMIKGRKDRDGQSQTHHHPLWRILLDGLV 143

Query: 166 TGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            G  +G +G GGG      ++   G  +  A  TS  V A+ +F  L   + S       
Sbjct: 144 VGAATGLVGAGGGFLVVPALVLLAGLPMTAAVGTSLLVIAMKSFAGLGGYLTSVS----- 198

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                  ++   V  +   +I  + +  +L+ ++ ++ L  GF   +     
Sbjct: 199 -------LDWPLVAAVTLAAIAGSFVGIRLTSVVPERALRKGFGAFVLLMGA 243



 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 60/148 (40%), Gaps = 14/148 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  I++   + G  +GL G GGG ++VP L            + M  A+GTSL VIA  S
Sbjct: 134 LWRILLDGLVVGAATGLVGAGGGFLVVPALVLL-------AGLPMTAAVGTSLLVIAMKS 186

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                 +    +++  ++          + V   + S V +  L K F  F LLMG  +L
Sbjct: 187 FAGLGGYLTSVSLDWPLVAAVTLAAIAGSFVGIRLTSVVPERALRKGFGAFVLLMGAFVL 246

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLS 170
                   ++ P      I G+V    S
Sbjct: 247 -------SQELPFPAGPIILGVVVVLAS 267


>gi|120404979|ref|YP_954808.1| hypothetical protein Mvan_4025 [Mycobacterium vanbaalenii PYR-1]
 gi|119957797|gb|ABM14802.1| protein of unknown function DUF81 [Mycobacterium vanbaalenii PYR-1]
          Length = 291

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 55/261 (21%), Positives = 97/261 (37%), Gaps = 25/261 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L I  +   G   GL G GG ++ VP+L+           +    A+ TSL V+  T
Sbjct: 1   MIALTIGLAVFVGIALGLLGGGGSILTVPLLAYV-------AGMDAKAAIATSLLVVGVT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S +  + H R G +  +    +            L+  ++  + L   FA+  +   I M
Sbjct: 54  SAIGAISHARAGRVQWRTGLIFGAAGMAGAYAGGLLARYIPGTILLIGFALMMIATAIAM 113

Query: 142 LKRDRL----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKAT 196
           L+  +         + P   +    G++ G ++G +G GGG      +    G  +  A 
Sbjct: 114 LRGRKTIETGETGHRLPVPKIL-AEGLIVGLVTGLVGAGGGFLVVPALALLGGLPMPIAV 172

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            TS  V A+ +F  L   + S              +N    L +   +++   +  +L+ 
Sbjct: 173 GTSLIVIAMKSFAGLAGYLTSV------------HINWTLALAVTAAAVIGALIGARLTA 220

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
           MI    L   F   +   S V
Sbjct: 221 MINPDSLRKTFGWFVLVMSSV 241



 Score = 63.9 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 7/120 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I+    + G ++GL G GGG ++VP L+           + M +A+GTSL VIA  S   
Sbjct: 134 ILAEGLIVGLVTGLVGAGGGFLVVPALALL-------GGLPMPIAVGTSLIVIAMKSFAG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +     IN  +         I  ++ + + + ++   L K F  F L+M  ++L ++
Sbjct: 187 LAGYLTSVHINWTLALAVTAAAVIGALIGARLTAMINPDSLRKTFGWFVLVMSSVILAQE 246


>gi|309779111|ref|ZP_07673878.1| membrane protein [Ralstonia sp. 5_7_47FAA]
 gi|308922176|gb|EFP67806.1| membrane protein [Ralstonia sp. 5_7_47FAA]
          Length = 260

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 92/233 (39%), Gaps = 21/233 (9%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G    +  H+A GT+L +IAP  ++ F  + +   ++++ +          T V 
Sbjct: 34  AIPVLGYLYGMDQHLAQGTALVMIAPNVLIGFWRYHQRHPVHLRSVALICVFSMAATYVA 93

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE--------RKFPDNYVKYIWGMVT 166
           +   + +D   L+ AFA+F +++ +    + +             +        + G+ +
Sbjct: 94  ARFAAGLDAHLLHTAFAVFLIVLALYFASQLKEKPHAGDTAHAAPRAMPAAALPLMGVAS 153

Query: 167 GFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G +SG   VGGG+     L+ F+G    +A   +  +    +  AL    ++        
Sbjct: 154 GAMSGIFTVGGGLVVVPALVTFFGMPQTRAQGMALALVVPGSLIALATYAHA-------- 205

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               G V+ G  + +    I        L+Y    + L + F  ++  T+ + 
Sbjct: 206 ----GHVDWGTGIPLAAGGIASVSWGVALAYRFSARRLRLAFCTVLLGTALMM 254



 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 7/116 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +    SG +SG+F VGGGLV+VP L   F   G+  +    +A    L ++ P S+++  
Sbjct: 148 LMGVASGAMSGIFTVGGGLVVVPALVTFF---GMPQTRAQGMA----LALVVPGSLIALA 200

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   G ++             +      +        L  AF    L   ++ML 
Sbjct: 201 TYAHAGHVDWGTGIPLAAGGIASVSWGVALAYRFSARRLRLAFCTVLLGTALMMLL 256


>gi|115371973|ref|ZP_01459285.1| hypothetical membrane permease protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|310824727|ref|YP_003957085.1| hypothetical protein STAUR_7503 [Stigmatella aurantiaca DW4/3-1]
 gi|115370938|gb|EAU69861.1| hypothetical membrane permease protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309397799|gb|ADO75258.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 285

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 81/227 (35%), Gaps = 23/227 (10%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L       G++       A+ TSL V+  TS+   + H R   +  +    +     
Sbjct: 29  VPILVYVL---GMEP----RGAIATSLFVVGVTSLTGMLLHARARRVQWREGLLFGAAGM 81

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW----GM 164
               +   +   V    L  AFA   L M   ML+  +   E   P    K +     G 
Sbjct: 82  AGAALGGRLGKAVPSQLLLVAFAGLMLAMAFAMLRPRQAQAEPPAPLPKHKGVAVLCHGA 141

Query: 165 VTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
             G L+G +G GGG      +    G S+ KA ATS  V +L +    L    +G     
Sbjct: 142 GVGLLTGLVGAGGGFLVVPALALLGGLSMPKAVATSLLVISLNSTAGFLSAFLAGAP--- 198

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
                   V+      +   ++  + L T LS  +  + L   F+  
Sbjct: 199 --------VDWRLAAGMSLATVGGSWLGTSLSRKLSPEALRRSFAFF 237



 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 8/128 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++      G L+GL G GGG ++VP L+           + M  A+ TSL VI+  S 
Sbjct: 134 VAVLCHGAGVGLLTGLVGAGGGFLVVPALALL-------GGLSMPKAVATSLLVISLNST 186

Query: 84  MSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             F+     G  ++ ++           + + + +   +    L ++FA F   +G+ +L
Sbjct: 187 AGFLSAFLAGAPVDWRLAAGMSLATVGGSWLGTSLSRKLSPEALRRSFAFFTGALGLFIL 246

Query: 143 KRDRLYCE 150
            R+     
Sbjct: 247 VRELPTLH 254


>gi|228996661|ref|ZP_04156299.1| hypothetical protein bmyco0003_12470 [Bacillus mycoides Rock3-17]
 gi|229004310|ref|ZP_04162110.1| hypothetical protein bmyco0002_12740 [Bacillus mycoides Rock1-4]
 gi|228756944|gb|EEM06189.1| hypothetical protein bmyco0002_12740 [Bacillus mycoides Rock1-4]
 gi|228763090|gb|EEM11999.1| hypothetical protein bmyco0003_12470 [Bacillus mycoides Rock3-17]
          Length = 281

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 64/292 (21%), Positives = 124/292 (42%), Gaps = 41/292 (14%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           +YN   + +  +  +++YI L+ +   ++GT+  L G+GGG+++VP+L           S
Sbjct: 1   MYNECWISYTEELAILEYIMLLFI-GLIAGTVGSLVGLGGGIIIVPLLIGL-------HS 52

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +   +A+GTS+  +  T + S + + +H  ++ K             ++ S     +++ 
Sbjct: 53  LSPQLAVGTSIVTVVFTGLSSTLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQD 112

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYC---------ERKFPD-----------NYVKYIWGM 164
             +  F IF + + IL+L RD+L           +R F D            ++  I   
Sbjct: 113 SFSLYFGIFLIFVSILLLLRDKLKPLSLSNATVIKRSFTDSEGKTVYYQFPPFLSIIIAF 172

Query: 165 VTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           V GF+SG  G+GGG+     +ML +      A ATS  +  L A  + L  I        
Sbjct: 173 VVGFISGLFGIGGGVLLVPAMMLLFAFPAQIAVATSMFIVFLSAIVSSLTHI-------- 224

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
               SLG V+    LI++P + +   +   ++  +    +     + +    
Sbjct: 225 ----SLGNVSWIYALILIPGAWIGGKIGAYINTKLSGNAIINLLRITLLILG 272


>gi|126659473|ref|ZP_01730606.1| hypothetical protein CY0110_07099 [Cyanothece sp. CCY0110]
 gi|126619207|gb|EAZ89943.1| hypothetical protein CY0110_07099 [Cyanothece sp. CCY0110]
          Length = 258

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 76/215 (35%), Gaps = 19/215 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ TS   I  TS    +++ R G ++ K +        IT     ++ +++ +  L  A
Sbjct: 44  AVATSSLAIVITSSSGSIQNWRMGYLDFKRVILLGIPAIITAQFGVIVANYIPEFVLLTA 103

Query: 130 FAIFCLLMGI------LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
           F    +           ++         +  +       G + GFL+G  G+GGG+    
Sbjct: 104 FGCLLIFNIFLSNIRRQLVTASHQQSSSRLSEKLACLFTGGIGGFLAGLFGIGGGVIMVP 163

Query: 184 L-MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           L ML    +I  A  TS GV  + +  + L    +              V     +I+  
Sbjct: 164 LQMLLLKETIKVAIQTSLGVIVITSISSCLGHALNN------------NVLWLVGIILGL 211

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             ++   ++ +    +  K +   F  ++   S  
Sbjct: 212 GGLIGAQISARFLPRLPDKVVRFSFYFMLAILSVY 246



 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              +    + G L+GLFG+GGG++MVP+     +         + VA+ TSLGVI  TS+
Sbjct: 137 LACLFTGGIGGFLAGLFGIGGGVIMVPLQMLLLKE-------TIKVAIQTSLGVIVITSI 189

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            S + H  +  +   +         I   +++  +  +    +  +F     ++ +   
Sbjct: 190 SSCLGHALNNNVLWLVGIILGLGGLIGAQISARFLPRLPDKVVRFSFYFMLAILSVYTF 248


>gi|228938664|ref|ZP_04101269.1| hypothetical protein bthur0008_13280 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228971545|ref|ZP_04132169.1| hypothetical protein bthur0003_13230 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978156|ref|ZP_04138534.1| hypothetical protein bthur0002_13590 [Bacillus thuringiensis Bt407]
 gi|229069104|ref|ZP_04202396.1| hypothetical protein bcere0025_13110 [Bacillus cereus F65185]
 gi|229078735|ref|ZP_04211289.1| hypothetical protein bcere0023_13980 [Bacillus cereus Rock4-2]
 gi|229149750|ref|ZP_04277980.1| hypothetical protein bcere0011_13080 [Bacillus cereus m1550]
 gi|228633781|gb|EEK90380.1| hypothetical protein bcere0011_13080 [Bacillus cereus m1550]
 gi|228704608|gb|EEL57040.1| hypothetical protein bcere0023_13980 [Bacillus cereus Rock4-2]
 gi|228714049|gb|EEL65932.1| hypothetical protein bcere0025_13110 [Bacillus cereus F65185]
 gi|228781628|gb|EEM29828.1| hypothetical protein bthur0002_13590 [Bacillus thuringiensis Bt407]
 gi|228788204|gb|EEM36159.1| hypothetical protein bthur0003_13230 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228821040|gb|EEM67060.1| hypothetical protein bthur0008_13280 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 281

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 62/294 (21%), Positives = 123/294 (41%), Gaps = 41/294 (13%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           +YN   + +L +  +++YI L+ +   ++GT+  L G+GGG+++VP+L           S
Sbjct: 1   MYNNWWISYLEELAILEYIMLLFI-GLIAGTVGSLVGLGGGIIIVPLLIGL-------HS 52

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +   +A+GTS+  +  T + S + + +H  ++ K             ++ S     +++ 
Sbjct: 53  LSPQLAVGTSMVTVVFTGLSSTLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQD 112

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYC---------ERKFPDNYVKYI-----------WGM 164
             +  F IF + + IL++ RD+L           +R F DN    +              
Sbjct: 113 TFSLYFGIFLIFVSILLMLRDKLKPLSLSNTSVIKRSFTDNDGNTVHYQFPPFLAIFIAF 172

Query: 165 VTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           + GF+SG  G+GGG      +ML +    + A ATS  +  L A  +    I        
Sbjct: 173 IVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATSMFIVFLSAIVSSATHI-------- 224

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               SLG V+    LI++P + +   +   ++  +    +     + +      
Sbjct: 225 ----SLGNVSWIYALILIPGAWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 274


>gi|138896571|ref|YP_001127024.1| hypothetical protein GTNG_2934 [Geobacillus thermodenitrificans
           NG80-2]
 gi|196249274|ref|ZP_03147972.1| protein of unknown function DUF81 [Geobacillus sp. G11MC16]
 gi|134268084|gb|ABO68279.1| Hypothetical membrane spanning protein [Geobacillus
           thermodenitrificans NG80-2]
 gi|196211031|gb|EDY05792.1| protein of unknown function DUF81 [Geobacillus sp. G11MC16]
          Length = 300

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 64/141 (45%), Gaps = 1/141 (0%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+++  F++GT+  L G+GGG+++VP L   F  +G   ++   VA+GTSL VI    +
Sbjct: 4   ALLLLIGFVAGTVGSLAGLGGGVIIVPALLF-FGSLGWLSAVTPQVAVGTSLVVIIFNGL 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +   ++ +    +       TV+ + + + +     +  F +F + M + +  
Sbjct: 63  SSTLSYMKDKMVDYQSGLLFCLGSIPGTVIGAWVNNTLSVDRFSLYFGLFLMAMSLFLSL 122

Query: 144 RDRLYCERKFPDNYVKYIWGM 164
             +    +   +       G 
Sbjct: 123 SQKKTKAQASEEGAAARESGS 143



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 44/127 (34%), Gaps = 19/127 (14%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-------ASIYKATATSAGVSALIAFP 209
            +  + G V G +    G+GGG+     +LF+G        +   A  TS  V       
Sbjct: 4   ALLLLIGFVAGTVGSLAGLGGGVIIVPALLFFGSLGWLSAVTPQVAVGTSLVVIIFNGLS 63

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           + L  +      + +  +  G       L+    SI  T +   ++  +     ++ F +
Sbjct: 64  STLSYM-----KDKMVDYQSG-------LLFCLGSIPGTVIGAWVNNTLSVDRFSLYFGL 111

Query: 270 IMFTTSF 276
            +   S 
Sbjct: 112 FLMAMSL 118



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 7/78 (8%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP +   F+          HVA+ TS+ +I  +S++    H   G +        I  
Sbjct: 207 LMVPAMIVLFRF-------PPHVAVATSMLLIFLSSLVGSTTHMALGNVQWGFALALIPG 259

Query: 107 LPITTVVTSLMISHVDKS 124
           + I     + +   +   
Sbjct: 260 IWIGAKTGAWINKRMQSR 277


>gi|196038521|ref|ZP_03105830.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|196030929|gb|EDX69527.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
          Length = 251

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 33/258 (12%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II+   + G L G  G GG   ++ +L+  F        I +HVA+ TSL  +A T++  
Sbjct: 3   IIITMLVMGILLGFVGDGGAGFIIAILTLVFH-------IPIHVALATSLTAMAFTTLSG 55

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + H R G + + I         + + + S + S +    L+   A    L  I M  + 
Sbjct: 56  VISHYREGNVVLTIGGIVGGCGALGSYIGSKIGSLIPGHLLHWFTAGMLFLSAIFMFIKL 115

Query: 146 RLYCERKFP-----------DNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIY 193
             +  R+             +       G+VTG ++G+ G+G   F  L LM+  G +I 
Sbjct: 116 IKFQNREELLLAEIKDFSKENIMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLLGLTIQ 175

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           ++  T+  V   IA    L               S G+++   +L +L  ++L   +  K
Sbjct: 176 QSVGTTMLVILPIAIGGGLGYS------------SEGYLDHILLLQVLIGTMLGAYIGAK 223

Query: 254 LSYMIGKKYLTIGFSMIM 271
            +    +  L   FSMIM
Sbjct: 224 FTNYAPRMLLK--FSMIM 239



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           KD   + I   I    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 130 KDFSKENIMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 182

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 183 LVILPIAIGGGLGYSSEGYLDHILLLQVLIGTMLGAYIGAKFTNYAPRMLLK 234


>gi|289522500|ref|ZP_06439354.1| conserved hypothetical membrane protein, DUF81 family
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289504336|gb|EFD25500.1| conserved hypothetical membrane protein, DUF81 family
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 264

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 53/269 (19%), Positives = 105/269 (39%), Gaps = 36/269 (13%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  LI V SF++G+++GL G  G +V+VP L                 A+G SL   A  
Sbjct: 2   FYILITVISFIAGSITGLIGASGVMVIVPGLVML--------GCSTFDAIGCSLFADALA 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S++    + R+G +N++          +   + S +  H+ +  +  +F +  L+   + 
Sbjct: 54  SLVVAWTYSRYGNLNLRQGWPIALGSILGAQLGSFISPHLPEMGVGGSFGVLLLVSAAMF 113

Query: 142 LKRDRLYCERKFPDNYVK-------------------YIWGMVTGFLSGALGVGGGIFTN 182
            ++       K                           I G++ G +SG LG GGG+   
Sbjct: 114 WRKGSKKAAIKPEGKTTSNDEVKGFLKVLRDNPKTSGTILGVLVGIISGILGAGGGVMIL 173

Query: 183 LLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
           L+++F  G  +++   TS  + A  A    L   ++G             + I + +  +
Sbjct: 174 LILVFVMGYKVHEGVGTSTLIMAFTAASGALGHAFTGNLPMD--------IAIPSAIGTV 225

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMI 270
               L    A K +  +  K + + F+++
Sbjct: 226 VGGRLTAGFANKTNEAVLGKIVGVIFAVL 254



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +   L G +SG+ G GGG++++ +L              +H  +GTS  ++A T+    +
Sbjct: 152 ILGVLVGIISGILGAGGGVMILLILVFVM-------GYKVHEGVGTSTLIMAFTAASGAL 204

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            H   G + M I         +   +T+   +  +++ L K   +   ++G LM+  
Sbjct: 205 GHAFTGNLPMDIAIPSAIGTVVGGRLTAGFANKTNEAVLGKIVGVIFAVLGALMIFG 261


>gi|56421519|ref|YP_148837.1| hypothetical protein GK2984 [Geobacillus kaustophilus HTA426]
 gi|56381361|dbj|BAD77269.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 300

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 61/125 (48%), Gaps = 1/125 (0%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+++  F++GT+  L G+GGG+++VP L   F  +G   ++   VA+GTSL VI    +
Sbjct: 4   ALLVLIGFIAGTVGSLAGLGGGVIIVPSLLF-FGALGWLSAVTPQVAVGTSLVVIIFNGL 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +   ++ +    +        V+ + + + +  +  +  F +F + M + +  
Sbjct: 63  SSTLSYMKDKMVDYQSGLLFCLGSVPGAVIGAWVNNTLSAAHFSLYFGLFLIAMSLFLSL 122

Query: 144 RDRLY 148
             +  
Sbjct: 123 SRKKT 127



 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 44/127 (34%), Gaps = 19/127 (14%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-------ASIYKATATSAGVSALIAFP 209
            +  + G + G +    G+GGG+     +LF+G        +   A  TS  V       
Sbjct: 4   ALLVLIGFIAGTVGSLAGLGGGVIIVPSLLFFGALGWLSAVTPQVAVGTSLVVIIFNGLS 63

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           + L  +      + +  +  G       L+    S+    +   ++  +   + ++ F +
Sbjct: 64  STLSYM-----KDKMVDYQSG-------LLFCLGSVPGAVIGAWVNNTLSAAHFSLYFGL 111

Query: 270 IMFTTSF 276
            +   S 
Sbjct: 112 FLIAMSL 118



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 7/78 (8%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP +   F+          HVA+ TS+ +I  +S++  + H   G +        I  
Sbjct: 207 LMVPAMIVLFRF-------PPHVAVATSMLMIFLSSLVGSLTHVAMGNVQWSFALALIPG 259

Query: 107 LPITTVVTSLMISHVDKS 124
           + I     + +   +   
Sbjct: 260 VWIGAKTGAWINKRMPSR 277


>gi|134299433|ref|YP_001112929.1| hypothetical protein Dred_1576 [Desulfotomaculum reducens MI-1]
 gi|134052133|gb|ABO50104.1| protein of unknown function DUF81 [Desulfotomaculum reducens MI-1]
          Length = 251

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 97/237 (40%), Gaps = 24/237 (10%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M+P++    +       +  H A GTSL  +  T +   + +  +G++++         
Sbjct: 23  IMIPLMVGILK-------MSQHQAHGTSLVALVFTGLSGAVTYALNGSVDIVASALLAST 75

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY----VKYIW 162
              T    +   + + +  L K+F  F +++ +L+L +  L    +    +    +  + 
Sbjct: 76  AIFTARAGARFANALPEWKLKKSFGGFLIVVTLLLLIKPYLPHVAEPAMGWVKILILLLA 135

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
           G  TGFLSG +GVGGG      M+   G + Y A   S      +               
Sbjct: 136 GGFTGFLSGMMGVGGGTIMVPSMVLLIGFTQYTAQGCSLLAMVPVGIVGAYT-------- 187

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                W LG V+   +  ++P  ++ T L   L++++ +  L I F+++M  T   +
Sbjct: 188 ----HWRLGNVSTSILPGLIPGILIGTFLGGSLAHILSEGALRIIFAIVMIRTGVKY 240



 Score = 82.0 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 7/128 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++++A   +G LSG+ GVGGG +MVP +               + A G SL  + P  
Sbjct: 129 ILILLLAGGFTGFLSGMMGVGGGTIMVPSMVLLIGF-------TQYTAQGCSLLAMVPVG 181

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++    H R G ++  IL   I  + I T +   +   + +  L   FAI  +  G+  L
Sbjct: 182 IVGAYTHWRLGNVSTSILPGLIPGILIGTFLGGSLAHILSEGALRIIFAIVMIRTGVKYL 241

Query: 143 KRDRLYCE 150
           K  +   +
Sbjct: 242 KTPKPQPD 249


>gi|15899038|ref|NP_343643.1| hypothetical protein SSO2272 [Sulfolobus solfataricus P2]
 gi|284175089|ref|ZP_06389058.1| hypothetical protein Ssol98_10645 [Sulfolobus solfataricus 98/2]
 gi|13815571|gb|AAK42433.1| Membrane conserved hypothetical protein [Sulfolobus solfataricus
           P2]
          Length = 293

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 92/263 (34%), Gaps = 31/263 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLM-GIDDS-----ICMHVAMGTSLGV 77
            L I++  L G   GL G GG ++ +P+L     L  GI           H+ +GT+   
Sbjct: 17  LLSIISGILVGFSLGLIGGGGSILAIPLLLYFVGLANGIPPGSPEYTYITHLTLGTTALA 76

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +   S ++   H R G + +     +     I  V+ + +   +  + +   F    + +
Sbjct: 77  VGLNSYINSYMHFRRGNVRVPEGIIFTIPGVIGDVIGAYLSHLMSGALILFLFGFLMIAV 136

Query: 138 GILMLK------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
            I M +                   R+          G + GF SG  G+GGG      +
Sbjct: 137 AIRMWRSKCNPNRSVLYNNSHKLSLRERIKVTKVIPAGFLVGFASGYFGIGGGFLVVPGL 196

Query: 186 LFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           LF  G  + +A  TS          A +                 G+V+I   L+ L   
Sbjct: 197 LFSTGLDMLRAVGTSLIAVGTFGVTAAITYAVY------------GYVDIVISLLYLLGG 244

Query: 245 ILITPLATKLSYMIGKKYLTIGF 267
           ++     + ++  + ++ L   F
Sbjct: 245 VVGGYTGSTIASRMPRQTLRKLF 267



 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 7/125 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +I A FL G  SG FG+GGG ++VP L            + M  A+GTSL  +    
Sbjct: 167 VTKVIPAGFLVGFASGYFGIGGGFLVVPGLLF-------STGLDMLRAVGTSLIAVGTFG 219

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V + + +  +G +++ I   ++    +     S + S + +  L K FAI  +++ I  +
Sbjct: 220 VTAAITYAVYGYVDIVISLLYLLGGVVGGYTGSTIASRMPRQTLRKLFAIIIIVVAIYTM 279

Query: 143 KRDRL 147
             +R+
Sbjct: 280 YINRV 284


>gi|326801252|ref|YP_004319071.1| hypothetical protein Sph21_3867 [Sphingobacterium sp. 21]
 gi|326552016|gb|ADZ80401.1| protein of unknown function DUF81 [Sphingobacterium sp. 21]
          Length = 277

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 51/286 (17%), Positives = 105/286 (36%), Gaps = 44/286 (15%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            V+ +  +++  +  +G +  L G+GGG+V++P+L+           + +H A+G +L  
Sbjct: 2   TVLTFTLILLFGACCAGFIGSLTGLGGGVVIIPLLTVVL-------GVDIHYAIGAALVS 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +  TS  S   + + G  NM++            V  +L+ S    S +   F    +  
Sbjct: 55  VIATSSGSAAAYVKEGITNMRLGMFLEIATTAGAVGGALLASIAPTSLIAILFGCTLIFS 114

Query: 138 GILMLKRD---------RLYCERKFPDNY---------------VKYIWGMVTGFLSGAL 173
            +  L++           L    K P +Y                 +    + G LSG L
Sbjct: 115 ALNSLRKKEEHNVKSSSSLALALKLPSSYPSTSGIISYETKNVIGGFSMMGLAGMLSGLL 174

Query: 174 GVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G G F  + M          +T TS  +  + A  + ++ +  G+    +        
Sbjct: 175 GIGSGAFKVIAMDNIMRIPFKVSTTTSNFMMGVTATASAVIYLQKGYIEPDI-------- 226

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                + ++   +L      K+      K L + F++I+   +   
Sbjct: 227 ----CMPVVIGVLLGAMTGAKVLLRANPKKLRMFFAVIIIILALNM 268



 Score = 49.3 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+G LSGL G+G G   V  +    +       I   V+  TS  ++  T+  S + + +
Sbjct: 166 LAGMLSGLLGIGSGAFKVIAMDNIMR-------IPFKVSTTTSNFMMGVTATASAVIYLQ 218

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G I   I    +  + +  +  + ++   +   L   FA+  +++ + M+  
Sbjct: 219 KGYIEPDICMPVVIGVLLGAMTGAKVLLRANPKKLRMFFAVIIIILALNMIYN 271


>gi|228990560|ref|ZP_04150525.1| hypothetical protein bpmyx0001_13220 [Bacillus pseudomycoides DSM
           12442]
 gi|228769086|gb|EEM17684.1| hypothetical protein bpmyx0001_13220 [Bacillus pseudomycoides DSM
           12442]
          Length = 281

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 64/292 (21%), Positives = 124/292 (42%), Gaps = 41/292 (14%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           +YN   + +  +  +++YI L+ +   ++GT+  L G+GGG+++VP+L           S
Sbjct: 1   MYNECWISYTEELAILEYIMLLFI-GLIAGTVGSLVGLGGGIIIVPLLIGL-------HS 52

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +   +A+GTS+  +  T + S + + +H  ++ K             ++ S     +++ 
Sbjct: 53  LSPQLAVGTSIVTVVFTGLSSTLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQD 112

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYC---------ERKFPD-----------NYVKYIWGM 164
             +  F IF + + IL+L RD+L           +R F D            ++  I   
Sbjct: 113 SFSLYFGIFLIFVSILLLLRDKLKPLSLSNATVIKRSFTDSEGKTVYYQFPPFLSIIIAF 172

Query: 165 VTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           V GF+SG  G+GGG+     +ML +      A ATS  +  L A  + L  I        
Sbjct: 173 VVGFISGLFGIGGGVLLVPAMMLLFAFPAQIAVATSMFIVFLSAIVSSLTHI-------- 224

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
               SLG V+    LI++P + +   +   ++  +    +     + +    
Sbjct: 225 ----SLGNVSWIYALILIPGAWIGGKIGAYINTKLSGNAIINLLRITLIILG 272


>gi|227341362|gb|ACP25580.1| hypothetical protein NGR_c18160 [Sinorhizobium fredii NGR234]
          Length = 556

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 93/254 (36%), Gaps = 25/254 (9%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA+F++G +  + G GGG++ +P +  A    GI         +GT+       S  + +
Sbjct: 309 VAAFIAGFIDSIAG-GGGMITIPAMLIA----GIPPLET----LGTNKLQSLFGSGSASI 359

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            + RHG +N+K       +    +V  +L+ + V    L        + +      +  +
Sbjct: 360 AYARHGHVNLKDQLPMALMSAAGSVFGALIATVVPADALKGVLPFLLIAIAAYFGCKPNI 419

Query: 148 ---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVS 203
                 R+         +  + G   G  G G G F  L  +   G  I KATA +  ++
Sbjct: 420 GDVEKHRRMSAFLFTLTFVPLIGLYDGIFGPGTGSFFMLGFVSLAGYGILKATAHTKFLN 479

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
                 A LV +  G  L     W +G       L++     L   + ++ +   G K +
Sbjct: 480 FGSNLGAFLVFVLYGVVL-----WKVG-------LMMGAGQFLGAQVGSRYAMAKGAKII 527

Query: 264 TIGFSMIMFTTSFV 277
                ++    +  
Sbjct: 528 KPLLVVVSIALAIR 541


>gi|206890358|ref|YP_002249182.1| putative permease [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206742296|gb|ACI21353.1| putative permease [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 255

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 79/220 (35%), Gaps = 18/220 (8%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I  H A GTSL  +  T +   + +   G+++             T  + +     + + 
Sbjct: 40  ITQHRAHGTSLFALVFTGITGAITYGMKGSVDFIASLILAVTAIFTARIGAKFAHSLPEW 99

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGI 179
            L +AF  F +   ++++ +  L     F            + G+  GFL+G +G+GGG 
Sbjct: 100 KLKRAFGAFLIFAALILIAKPYLAELYHFEFGGTAKIITLLVIGIFAGFLAGMMGIGGGT 159

Query: 180 FTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
                ++       + A  TS               +  G  +  L P            
Sbjct: 160 VMVPALVLILNYGQHIAQGTSLLCMVPAGAVGAYTHLKLGNVIKELLP------------ 207

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            ++   IL T + + +++ +   YL + F+ I+  T   F
Sbjct: 208 GLIVGIILGTYIGSNIAHALADAYLRVIFAFIIIWTGIRF 247



 Score = 81.3 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 7/125 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++V    +G L+G+ G+GGG VMVP L           +   H+A GTSL  + P  
Sbjct: 136 IITLLVIGIFAGFLAGMMGIGGGTVMVPALVLIL-------NYGQHIAQGTSLLCMVPAG 188

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +    H + G +  ++L   I  + + T + S +   +  ++L   FA   +  GI  L
Sbjct: 189 AVGAYTHLKLGNVIKELLPGLIVGIILGTYIGSNIAHALADAYLRVIFAFIIIWTGIRFL 248

Query: 143 KRDRL 147
           K    
Sbjct: 249 KTPNP 253



 Score = 42.8 bits (100), Expect = 0.059,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 13/98 (13%)

Query: 181 TNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
              LM+     + ++A  TS            +                 G V+  A LI
Sbjct: 30  MIPLMVAVLKITQHRAHGTSLFALVFTGITGAITY------------GMKGSVDFIASLI 77

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           +   +I    +  K ++ + +  L   F   +   + +
Sbjct: 78  LAVTAIFTARIGAKFAHSLPEWKLKRAFGAFLIFAALI 115


>gi|229144150|ref|ZP_04272565.1| hypothetical protein bcere0012_13140 [Bacillus cereus BDRD-ST24]
 gi|228639369|gb|EEK95784.1| hypothetical protein bcere0012_13140 [Bacillus cereus BDRD-ST24]
          Length = 281

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 62/294 (21%), Positives = 123/294 (41%), Gaps = 41/294 (13%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           +YN   + +L +  +++YI L+ +   ++GT+  L G+GGG+++VP+L           S
Sbjct: 1   MYNNWWISYLEELAILEYIMLLFI-GLIAGTVGSLVGLGGGIIIVPLLIGL-------HS 52

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +   +A+GTS+  +  T + S + + +H  ++ K             ++ S     +++ 
Sbjct: 53  LSPQLAVGTSMVTVVFTGLSSTLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKLLNQD 112

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYC---------ERKFPDNYVKYI-----------WGM 164
             +  F IF + + IL++ RD+L           +R F DN    +              
Sbjct: 113 TFSLYFGIFLIFVSILLMLRDKLKPLSLSNTSVIKRSFTDNDGNTVHYQFPPFLAIFIAF 172

Query: 165 VTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           + GF+SG  G+GGG      +ML +    + A ATS  +  L A  +    I        
Sbjct: 173 IVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATSMFIVFLSAIVSSATHI-------- 224

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               SLG V+    LI++P + +   +   ++  +    +     + +      
Sbjct: 225 ----SLGNVSWIYALILIPGAWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 274


>gi|254410195|ref|ZP_05023975.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC
           7420]
 gi|196183231|gb|EDX78215.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC
           7420]
          Length = 267

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 62/273 (22%), Positives = 104/273 (38%), Gaps = 37/273 (13%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +   A   +G L+G  G+GGG V+VP+L                 A+ TS   I  T+
Sbjct: 6   LLIFASAGLFAGILAGFLGIGGGTVLVPLLVTL--------GYDYQQAVATSTLSIVITA 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   +++ R G I+ K +    F   IT  + + +       +L  AF +  L+   L+ 
Sbjct: 58  ISGTVQNWRLGNIDFKRIIAIGFPAIITAPIGAYLTELFADYWLKAAFGLLLLINIYLVR 117

Query: 143 KRDRLYCERKFPD----------------NYVKYIWGMVTGFLSGALGVGGGIFTNLL-M 185
            R RL    K                      +   G   G L+G  GVGGG+    L +
Sbjct: 118 LRKRLKAREKQDSLETVTPRQIPHSKSQAALARISTGSTAGLLAGVFGVGGGVILVPLQI 177

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           L  G SI  A  TS GV  + A  A +                 G V     L++    +
Sbjct: 178 LLLGESIKTAIQTSLGVIVITAISACVGHAVQ------------GNVLWIEGLLLGTGGL 225

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L   ++T+    +  + +++ FS ++   +  F
Sbjct: 226 LGVQISTRFLPKLPDQVVSLAFSALLAILAIYF 258



 Score = 42.8 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 7/116 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I     +G L+G+FGVGGG+++VP+               +  A+ TSLGVI  T++ + 
Sbjct: 151 ISTGSTAGLLAGVFGVGGGVILVPLQILLL-------GESIKTAIQTSLGVIVITAISAC 203

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + H   G +             +   +++  +  +    ++ AF+    ++ I   
Sbjct: 204 VGHAVQGNVLWIEGLLLGTGGLLGVQISTRFLPKLPDQVVSLAFSALLAILAIYFF 259


>gi|152996236|ref|YP_001341071.1| hypothetical protein Mmwyl1_2214 [Marinomonas sp. MWYL1]
 gi|150837160|gb|ABR71136.1| hypothetical protein Mmwyl1_2214 [Marinomonas sp. MWYL1]
          Length = 267

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 98/260 (37%), Gaps = 2/260 (0%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++   L++     +G+++ +  +   L+ +P L     +  +     M  A+ T +    
Sbjct: 4   IEMFFLLLFIGAATGSITSIIKIAPALIAIPALYFFLPVFNLSFEHLMLPAIATCITAFI 63

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           P  + +++   + G ++ + L ++   + +  V+ + ++S         AF++  L+   
Sbjct: 64  PAHLYAWIISMKKGEVDSQQLLNFAPGIAMGGVIGAQLLSLSSLFVFKIAFSLITLIAVA 123

Query: 140 LMLKRDRLYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
            ++ R R                 G++ G LS   G  G    +LL  F          T
Sbjct: 124 NIVFRSRSEALHIVQVGKTWNLPIGLIIGVLSLVAGNCGHTLGHLLCRFKKVEAKLEQGT 183

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLP-PWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           S G     +  A++  IY     + +      G V + +++I+    +    L  K    
Sbjct: 184 SNGFVVFASIAAMVGFIYPAQTFDHIGLTGFAGAVQLPSMIILSCSHLFFYWLCHKRGNT 243

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           + K  L+I   + M  + F 
Sbjct: 244 LDKSVLSISVIVFMAFSVFR 263


>gi|83949994|ref|ZP_00958727.1| membrane protein [Roseovarius nubinhibens ISM]
 gi|83837893|gb|EAP77189.1| membrane protein [Roseovarius nubinhibens ISM]
          Length = 305

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 51/278 (18%), Positives = 99/278 (35%), Gaps = 54/278 (19%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG +M P+L       GI  +    VA+ T    I  +S    + H R  T++
Sbjct: 28  SGMFGVGGGFLMTPLLFFI----GIPPA----VAVATEANQIVASSFSGVLAHFRRKTVD 79

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFCLLMGILMLK-------- 143
           +++    +        V  ++ +++         +   + +F  ++G +M          
Sbjct: 80  LRMGTVLLVGGLCGAAVGVVLFNYLKSMGQVDLLVKLCYVVFLGIIGGMMFFESLRAIRK 139

Query: 144 ---------RDRLYCERKFP------------DNYVKYIWGMVTGFLSGALGVGGGIFTN 182
                    R +     K P                  I G+  G L+  +GVGGG    
Sbjct: 140 SRAGGPPPKRKKHTFIHKMPFKMRFRTSGLYISVIPPLIVGVCVGILAAIMGVGGGFIMV 199

Query: 183 LLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
             M++  G        TS      +     L+   + +            V+I   +++L
Sbjct: 200 PAMIYLLGMPTKVVVGTSLFQIIFVTAFTTLLHATTNYT-----------VDIALAVLLL 248

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              ++   + T++   +  + L I  +M++    F  A
Sbjct: 249 VGGVIGAQIGTRIGTKLKAEQLRILLAMMVLAVCFKLA 286



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 47/126 (37%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G L+ + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 177 LIVGVCVGILAAIMGVGGGFIMVPAMIYLL-------GMPTKVVVGTSLFQIIFVTAFTT 229

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           + H     T+++ +    +    I   + + + + +    L    A+  L +   +    
Sbjct: 230 LLHATTNYTVDIALAVLLLVGGVIGAQIGTRIGTKLKAEQLRILLAMMVLAVCFKLALDL 289

Query: 146 RLYCER 151
            +    
Sbjct: 290 LIEPSE 295


>gi|104780740|ref|YP_607238.1| hypothetical protein PSEEN1566 [Pseudomonas entomophila L48]
 gi|95109727|emb|CAK14428.1| conserved hypothetical protein; putative membrane protein
           [Pseudomonas entomophila L48]
          Length = 249

 Score = 83.2 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 82/228 (35%), Gaps = 17/228 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++          +   + 
Sbjct: 29  AIPALGVLFGLDQQLAQGTALVMVVPNVLLALWRYHQRNRIELRHALPLSLCSFLFAWLG 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGI----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           S+    +D   +   F  F + + +     M    +              + G   G + 
Sbjct: 89  SIWAVGIDAQSMRVYFVGFLVALAVWNVARMFLPVKPPSNELRYPWPWLGVLGSFAGTMG 148

Query: 171 GALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G  GVGG +    ++   +G +   A   S  ++A      LL       GL+    WS+
Sbjct: 149 GLFGVGGAVVATPILTSVFGTTQVVAQGLSLALAAPSTLVTLLTY-----GLHQSVDWSV 203

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G       + +    +L      KL++ + +K L   F + +   + +
Sbjct: 204 G-------VPLAVGGLLSISWGVKLAHALPEKVLRTLFCVFLVVCAVM 244



 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 55/117 (47%), Gaps = 7/117 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            + V    +GT+ GLFGVGG +V  P+L+  F    +       VA G SL + AP++++
Sbjct: 136 WLGVLGSFAGTMGGLFGVGGAVVATPILTSVFGTTQV-------VAQGLSLALAAPSTLV 188

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + + +  H +++  +         ++      +   + +  L   F +F ++  +++
Sbjct: 189 TLLTYGLHQSVDWSVGVPLAVGGLLSISWGVKLAHALPEKVLRTLFCVFLVVCAVML 245


>gi|229016806|ref|ZP_04173736.1| hypothetical protein bcere0030_13740 [Bacillus cereus AH1273]
 gi|228744542|gb|EEL94614.1| hypothetical protein bcere0030_13740 [Bacillus cereus AH1273]
          Length = 281

 Score = 83.2 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 62/294 (21%), Positives = 124/294 (42%), Gaps = 41/294 (13%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           +YN   + ++ +  +++YI L+ +   ++GT+  L G+GGG+++VP+L           S
Sbjct: 1   MYNDWWISYIEELAILEYIMLLFI-GLIAGTVGSLVGLGGGIIIVPLLIGL-------HS 52

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +   +A+GTS+  +  T + S + + +H  ++ K             ++ S     +++ 
Sbjct: 53  LSPQLAVGTSMVTVVFTGLASTLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQD 112

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYC---------ERKFPDNYVKYI-----------WGM 164
             +  F IF + + IL++ RD+L           +R F DN    +              
Sbjct: 113 TFSLYFGIFLIFVSILLILRDKLKPLSLSNMTVIKRSFTDNEGNTVDYQFPPFLAIFIAF 172

Query: 165 VTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           + GF+SG  G+GGG      +ML +    + A ATS  +  L A  + L  I        
Sbjct: 173 IVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATSMFIVFLSAIVSSLTHI-------- 224

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               SLG V+    LI++P + +   +   ++  +    +     + +      
Sbjct: 225 ----SLGNVSWAYALILIPGAWVGGKIGAYINTKLSGNAVINLLRITLIILGTR 274


>gi|218506980|ref|ZP_03504858.1| hypothetical conserved membrane protein [Rhizobium etli Brasil 5]
          Length = 244

 Score = 83.2 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 94/254 (37%), Gaps = 19/254 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I   F +  + G  G+  G++     + +    G+  +    +   T +     T+
Sbjct: 6   IFFFIAVGFCAQIVDGALGMAFGVLS----TTSLLAFGVPAANASAMTHVTEM----FTT 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H  H  ++ +++        I   + + +++++D   +    + + L +G+L+L
Sbjct: 58  AASGISHAYHRNVDWRLVARLAPAGMIGGAIGAYLLANIDGKVIAPFVSAYLLAIGLLIL 117

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            +      R+   ++     G   G L    G G G      ++  G  + +   ++   
Sbjct: 118 YKAFRPPSRREVRDWAVPPVGFCGGMLDAIGGGGWGPVVTSTLIGRGHDLKRVIGSTNFT 177

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              +     L  I            +LG+  + + + ++   ++  P    L   +  + 
Sbjct: 178 EFAVTLTISLTFIL-----------TLGWSELNSAIGLIIGGVIAAPFGAILVKRLPVRP 226

Query: 263 LTIGFSMIMFTTSF 276
           L +  SM++ TTS 
Sbjct: 227 LMVAVSMVIITTSA 240


>gi|84500291|ref|ZP_00998557.1| membrane protein [Oceanicola batsensis HTCC2597]
 gi|84392225|gb|EAQ04493.1| membrane protein [Oceanicola batsensis HTCC2597]
          Length = 306

 Score = 83.2 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 109/309 (35%), Gaps = 58/309 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + V+L    V   + L++    + G LSG+FGVGGG ++ P+L       GI  +    V
Sbjct: 1   MQVYLPIAEVSVNVFLLLGIGGIVGVLSGMFGVGGGFLITPLLFFV----GIPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS----- 124
           A+ TS   I  +SV + + H R  T+++++    +    + + +  ++ +++        
Sbjct: 53  AVATSANQIVASSVSAVLAHLRRRTVDLRMGTVLLLGGLMGSALGIVIFNYLRSQGQVDL 112

Query: 125 FLNKAFAIFCLLMGILML---------------------------------KRDRLYCER 151
            +N  + IF   +G LM                                   + R     
Sbjct: 113 LVNLCYVIFLGTVGALMFIESLRALQRTRRKPGTVAPVKPRRQRSWIYALPLKVRFRTSG 172

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPA 210
            +       + GM  G L+  +GVGGG      M++           TS      +    
Sbjct: 173 LYISVIPPILVGMSVGVLAAIMGVGGGFIMVPAMIYLLNMPTKVVIGTSLFQIIFVTAFT 232

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            L+   +              V++   L +L   ++     T L   +  + L I  +++
Sbjct: 233 TLLHAVTNQT-----------VDLMLALTLLLGGVVGAQFGTSLGSRMRAEQLRILLAVL 281

Query: 271 MFTTSFVFA 279
           +       A
Sbjct: 282 VLAVCGKLA 290



 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 8/134 (5%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           +Y   L V      +   +   I+     G L+ + GVGGG +MVP +           +
Sbjct: 159 IYALPLKVRFRTSGLYISVIPPILVGMSVGVLAAIMGVGGGFIMVPAMIYLL-------N 211

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHR-RHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           +   V +GTSL  I   +  + + H   + T+++ +    +    +     + + S +  
Sbjct: 212 MPTKVVIGTSLFQIIFVTAFTTLLHAVTNQTVDLMLALTLLLGGVVGAQFGTSLGSRMRA 271

Query: 124 SFLNKAFAIFCLLM 137
             L    A+  L +
Sbjct: 272 EQLRILLAVLVLAV 285


>gi|221308401|ref|ZP_03590248.1| hypothetical protein Bsubs1_03198 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312722|ref|ZP_03594527.1| hypothetical protein BsubsN3_03169 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317646|ref|ZP_03598940.1| hypothetical protein BsubsJ_03133 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|1945085|dbj|BAA19693.1| ydhB [Bacillus subtilis]
          Length = 259

 Score = 83.2 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 50/207 (24%), Positives = 82/207 (39%), Gaps = 19/207 (9%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +H A+GTSL  +A TS+     H R G I MKI         + +   + + S +   
Sbjct: 35  IPIHTALGTSLAGMAFTSLSGAYSHYREGNIQMKIGLIVGGFAAVGSFFGAKLTSFIPAD 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERK------FPDNYVKYIWGMVTGFLSGALGVGGG 178
            L+   A    L  IL+L R  +  E+               I G+  G LSG  G+G  
Sbjct: 95  LLHYLTAGMLFLSAILILIRLFILKEKAQVNQSTLSTYTRAVILGIAAGVLSGTFGIGSA 154

Query: 179 IFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
            F  + LM+    SI  +  T+  V   +A    +  I            + GFV+   +
Sbjct: 155 PFIQIGLMIMLNLSIRHSVGTTMLVIIPLAVGGGIGYI------------TEGFVDYVLL 202

Query: 238 LIILPISILITPLATKLSYMIGKKYLT 264
           + +L  ++    +  K + ++ K  L 
Sbjct: 203 VKVLVGTMCGAYVGAKFTNLMPKVVLK 229



 Score = 36.2 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
              +      ++    +G LSG FG+G    +   L           ++ +  ++GT++ 
Sbjct: 126 QSTLSTYTRAVILGIAAGVLSGTFGIGSAPFIQIGLMIML-------NLSIRHSVGTTML 178

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           VI P +V   + +   G ++  +L   +        V +   + + K  L 
Sbjct: 179 VIIPLAVGGGIGYITEGFVDYVLLVKVLVGTMCGAYVGAKFTNLMPKVVLK 229


>gi|190890909|ref|YP_001977451.1| hypothetical protein [Rhizobium etli CIAT 652]
 gi|190696188|gb|ACE90273.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652]
          Length = 243

 Score = 83.2 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 93/254 (36%), Gaps = 19/254 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I   F +  + G  G+  G++     + +    G+  +    +   T +     T+
Sbjct: 5   IFFFIAVGFCAQIVDGALGMAFGVLS----TTSLLAFGVPAANASAMTHVTEM----FTT 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H  H  ++ +++        I   + + +++++D   +    + + L +G+L+ 
Sbjct: 57  AASGISHAYHRNVDWRLVARLAPAGMIGGAIGAYLLANIDGKVIAPFVSAYLLAIGLLIF 116

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            +      R+   ++     G   G L    G G G      ++  G  + +   ++   
Sbjct: 117 YKAFRPPSRREVRDWAVPPVGFCGGMLDAIGGGGWGPVVTSTLIGRGHDLKRVIGSTNFT 176

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              +     L  I            +LG+  + + + ++   ++  P    L   +  + 
Sbjct: 177 EFAVTLTISLTFIL-----------TLGWSELNSAIGLIIGGVIAAPFGAILVKRLPVRP 225

Query: 263 LTIGFSMIMFTTSF 276
           L +  SM++ TTS 
Sbjct: 226 LMVAVSMVIITTSA 239


>gi|212704948|ref|ZP_03313076.1| hypothetical protein DESPIG_03015 [Desulfovibrio piger ATCC 29098]
 gi|212671612|gb|EEB32095.1| hypothetical protein DESPIG_03015 [Desulfovibrio piger ATCC 29098]
          Length = 249

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 93/259 (35%), Gaps = 24/259 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I +++  + + G L G  GVG G++++P LS           +  H AM TSL     T
Sbjct: 1   MIIILLAVALIVGGLIGTVGVG-GILLIPALSGL-------GGLTTHAAMATSLFSFIFT 52

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            ++    + +HG+I+  I         +     +L  +      LN       +  GI  
Sbjct: 53  GLLGTWLYCKHGSIHWGITIPVCIGGLVGGYPGALANAIAPAWILNLILGCIIIFAGIYA 112

Query: 142 LKRDRLYCERKFPD----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           L   +       P          + G   GF SG  GVGG + +  LM+  G +   + A
Sbjct: 113 LFPAKGGTITYRPGDGRQRLQLLLIGATVGFGSGLTGVGGPVLSVPLMVILGFTPLTSIA 172

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS  +    A    +    +            GFV++   L++    +       KL++ 
Sbjct: 173 TSQVIQITAATSGSISNFAN------------GFVDLHMALLVTVAELAGVVAGAKLAHS 220

Query: 258 IGKKYLTIGFSMIMFTTSF 276
           +    L    S++      
Sbjct: 221 VSSGVLKKMVSVVCIVVGA 239


>gi|251790354|ref|YP_003005075.1| hypothetical protein Dd1591_2772 [Dickeya zeae Ech1591]
 gi|247538975|gb|ACT07596.1| protein of unknown function DUF81 [Dickeya zeae Ech1591]
          Length = 254

 Score = 82.8 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 93/229 (40%), Gaps = 17/229 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G+   +  H+A GT+L +I P  ++ F+ +R+   I+ ++         ++  V 
Sbjct: 34  AIPVLGMLFGMNQHLAQGTALIMITPNVLIGFLRYRQRNKIDTRMTLMLCAFATVSAYVA 93

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILM----LKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           + M + +    L +AFAIF L++        +   R         +      G+ +GF+S
Sbjct: 94  AHMAAAIQVDNLQQAFAIFLLVLATYYIWQWINSRRSRTPTSVLSHRYLPALGVASGFMS 153

Query: 171 GALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G   VGGG+     L+  +G +  +A   +  +    A  AL           G   W+ 
Sbjct: 154 GIFTVGGGLVVVPALVTLFGFTQTQAQGIALALVVPGALAALASY-----AQAGNVDWAT 208

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G       + +    IL       L++ +    L + F +++ + + V 
Sbjct: 209 G-------IPLAIGGILSVSWGVALAHKLPVVALRLAFCLVLVSVAVVM 250



 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +      SG +SG+F VGGGLV+VP L   F             A G +L ++ P ++ 
Sbjct: 141 YLPALGVASGFMSGIFTVGGGLVVVPALVTLFGF-------TQTQAQGIALALVVPGALA 193

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   + + G ++            ++      +   +    L  AF +  + + ++ML
Sbjct: 194 ALASYAQAGNVDWATGIPLAIGGILSVSWGVALAHKLPVVALRLAFCLVLVSVAVVML 251


>gi|302867239|ref|YP_003835876.1| hypothetical protein Micau_2765 [Micromonospora aurantiaca ATCC
           27029]
 gi|302570098|gb|ADL46300.1| protein of unknown function DUF81 [Micromonospora aurantiaca ATCC
           27029]
          Length = 298

 Score = 82.8 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 91/260 (35%), Gaps = 23/260 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L +  + L G   GL G GG ++ VP+L            +    A+ TSL V+ 
Sbjct: 1   MTTLVLTLAGAVLIGVTLGLLGGGGSILAVPLLVYV-------ADLPAKEAIATSLLVVG 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS +  + H     +  +    +             +   V    L   FA+  L   +
Sbjct: 54  VTSAVGVLPHAWANRVRWRTGLIFGVAGMTGAYAGGRLAEFVPAGVLLTGFALMMLATAV 113

Query: 140 LMLKRDRLYCERKFPDNYVKY---IWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKA 195
            ML+  R    R  P           G+V G ++G +G GGG      +    G  +  A
Sbjct: 114 AMLRGRRSAEGRPVPHELPMLRVVGDGVVVGLVTGLVGAGGGFLVVPALALLGGLPMPIA 173

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TS  V A+ +F  L   + S              ++ G    +   +++ + L  +L+
Sbjct: 174 VGTSLVVIAMKSFAGLAGYLSSVQ------------IHWGLATGVTAAAVVGSLLGGRLA 221

Query: 256 YMIGKKYLTIGFSMIMFTTS 275
             I    L  GF   +    
Sbjct: 222 GRIPADLLRRGFGWFVVVMG 241



 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 7/108 (6%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
            GGG ++VP L+           + M +A+GTSL VIA  S      +     I+  +  
Sbjct: 152 AGGGFLVVPALALL-------GGLPMPIAVGTSLVVIAMKSFAGLAGYLSSVQIHWGLAT 204

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
                  + +++   +   +    L + F  F ++MG+ +L +     
Sbjct: 205 GVTAAAVVGSLLGGRLAGRIPADLLRRGFGWFVVVMGVFVLAQQLPPL 252


>gi|300312112|ref|YP_003776204.1| transmembrane permease [Herbaspirillum seropedicae SmR1]
 gi|300074897|gb|ADJ64296.1| transmembrane permease protein [Herbaspirillum seropedicae SmR1]
          Length = 254

 Score = 82.8 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 87/225 (38%), Gaps = 15/225 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G    +   +A GTSL +I P  V++F  +++   I             + T  +
Sbjct: 34  AIPVLGYLYGMDQQLAQGTSLVMIVPNVVIAFWRYKQRNKIEWSTAAMMCAPAVVATYFS 93

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGIL----MLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           + + + +D   L+  FA+F  ++ +     +L+R                  G+  G  +
Sbjct: 94  ARLATAIDARSLHFCFAVFMAVLALYYLWTLLRRSPAVVRPVVLGRRWIPFVGLSAGASA 153

Query: 171 GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
           G   VGG I    L+  +      A   + G+   +  P  LV +++ +   G   W++G
Sbjct: 154 GFFSVGGAIVAVPLLTAFFGMTQTA---AQGLGLAMVTPGTLVALWT-YAHAGHVDWAVG 209

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                  + +    +L       L++ + ++ L I F   +   S
Sbjct: 210 -------IPMALGGVLSISWGVALAHHLPERRLRILFCGALLLLS 247



 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            I      +G  +G F VGG +V VP+L+  F        +    A G  L ++ P +++
Sbjct: 141 WIPFVGLSAGASAGFFSVGGAIVAVPLLTAFF-------GMTQTAAQGLGLAMVTPGTLV 193

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   +   G ++  +         ++      +  H+ +  L   F    LL+ + M+
Sbjct: 194 ALWTYAHAGHVDWAVGIPMALGGVLSISWGVALAHHLPERRLRILFCGALLLLSVWMM 251


>gi|255321924|ref|ZP_05363074.1| hypothetical protein CAMSH0001_2011 [Campylobacter showae RM3277]
 gi|255301028|gb|EET80295.1| hypothetical protein CAMSH0001_2011 [Campylobacter showae RM3277]
          Length = 250

 Score = 82.8 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 91/254 (35%), Gaps = 21/254 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +      G LSG  G+GGG   VP+L              +  A+G S+  +  +SV  
Sbjct: 11  YVCLGLFVGFLSGFLGIGGGAAAVPILVFL--------GFDVKYAIGVSVLQMMFSSVYG 62

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + + ++ T+++K               +  +++ V   FL        +   I +  ++
Sbjct: 63  SLLNLKNKTLDLKPALVLGSGGFCGASASGFIVASVPSKFLLLTLICIQIFNVIKLFFKN 122

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSA 204
                   P     +  G+  G ++ ++G+GG +    +++ F    I KA +T      
Sbjct: 123 PEPKGAHNPSLVPLFFVGLFVGAVAISVGIGGSVIIMPVLINFLNYDIKKAISTGLFFVI 182

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
             +    +        L GL  + +G       +++   S++       L+  I +    
Sbjct: 183 FSSISGFIS-----LTLQGLVQYEVG-------VLVGIGSLISVRFGVALAQKIDRAIQK 230

Query: 265 IGFSMIMFTTSFVF 278
                ++ TT  + 
Sbjct: 231 RCLLALICTTLIIM 244


>gi|83950218|ref|ZP_00958951.1| membrane protein [Roseovarius nubinhibens ISM]
 gi|83838117|gb|EAP77413.1| membrane protein [Roseovarius nubinhibens ISM]
          Length = 307

 Score = 82.8 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 56/287 (19%), Positives = 106/287 (36%), Gaps = 56/287 (19%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L++    + G LSG+FGVGGG ++ P+L       GI  +    VA+ TS   I   S  
Sbjct: 16  LLLSIGLMVGLLSGIFGVGGGFLITPLLFFI----GIPPA----VAVATSANQIVAASFS 67

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGI 139
           + + H R  T+++ +    +    + + V   + + +         +N  + +F  L+G 
Sbjct: 68  AILAHLRRRTVDIPMGLALMIGGLLGSTVGIYIFNLLRSLGQVDLLVNLFYVVFLGLIGA 127

Query: 140 LML-------------------------------KRDRLYCERKFPDNYVKYIWGMVTGF 168
           LM                                 R R      +       + G   G 
Sbjct: 128 LMFIESLSALRKAQKQGPQTRRKRTRRDWVHAMPFRVRFRASGLYISVIPPLLVGFFVGV 187

Query: 169 LSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           LS  +GVGGG      M++  G        TS      ++    ++  YS   ++     
Sbjct: 188 LSAIMGVGGGFAVVPAMIYVLGMPTKVVVGTSLFQILFVSAYTTMMHAYSSQSVD----- 242

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                ++ AVL+I+   ++   +  ++  ++  + L I  +MI+   
Sbjct: 243 -----SVLAVLLIV-GGVIGAQIGARIGLLLRAEQLRILLAMIVLAV 283



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 47/135 (34%), Gaps = 8/135 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++  F  G LS + GVGGG  +VP +            +   V +GTSL  I   S  + 
Sbjct: 179 LLVGFFVGVLSAIMGVGGGFAVVPAMIYVL-------GMPTKVVVGTSLFQILFVSAYTT 231

Query: 87  MEH-RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H     +++  +    I    I   + + +   +    L    A+  L +   +    
Sbjct: 232 MMHAYSSQSVDSVLAVLLIVGGVIGAQIGARIGLLLRAEQLRILLAMIVLAVCCKLGLDL 291

Query: 146 RLYCERKFPDNYVKY 160
            L     F    V  
Sbjct: 292 VLPPSNVFSVTAVLA 306



 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 29/61 (47%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
           +  +    G++ G LSG  GVGGG     L+ F G     A ATSA      +F A+L  
Sbjct: 13  NGPLLLSIGLMVGLLSGIFGVGGGFLITPLLFFIGIPPAVAVATSANQIVAASFSAILAH 72

Query: 215 I 215
           +
Sbjct: 73  L 73


>gi|145294114|ref|YP_001136935.1| hypothetical protein cgR_0072 [Corynebacterium glutamicum R]
 gi|140844034|dbj|BAF53033.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 248

 Score = 82.8 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 91/228 (39%), Gaps = 20/228 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L+           +    A+  SL V+  TS++S + H R+G +  K    +     
Sbjct: 31  VPILTYV-------AGLEPREAIAASLFVVGTTSLVSAISHARNGRVRWKTGLLFGAAGM 83

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           +      L+  ++  + L  AFA+  +     ML+  +          +   + G+V G 
Sbjct: 84  VGAFGGGLLGGYIPGTILMIAFALMMIATSTAMLRGRKEKKGASKSSLWRVLVDGLVVGA 143

Query: 169 LSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           ++G +G GGG      +    G S+  A  TS  V  + +F  L   + S          
Sbjct: 144 VTGLVGAGGGFLVVPALALLGGLSMPVAVGTSLVVITMKSFAGLAGYLTSVQ-------- 195

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
               ++ G VL++   +I+ +   ++L+  + +  L  GF + +    
Sbjct: 196 ----LDWGLVLMVTAAAIVGSLAGSRLAGRVPETLLRKGFGVFVLVMG 239



 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 7/120 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++V   + G ++GL G GGG ++VP L+           + M VA+GTSL VI   S
Sbjct: 131 LWRVLVDGLVVGAVTGLVGAGGGFLVVPALALL-------GGLSMPVAVGTSLVVITMKS 183

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                 +     ++  ++        + ++  S +   V ++ L K F +F L+MG+ +L
Sbjct: 184 FAGLAGYLTSVQLDWGLVLMVTAAAIVGSLAGSRLAGRVPETLLRKGFGVFVLVMGVFVL 243


>gi|124266110|ref|YP_001020114.1| hypothetical protein Mpe_A0917 [Methylibium petroleiphilum PM1]
 gi|124258885|gb|ABM93879.1| putative membrane protein [Methylibium petroleiphilum PM1]
          Length = 247

 Score = 82.4 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 90/256 (35%), Gaps = 25/256 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I  + + G L G  GVG G++++P L+    L        +  +M T+L     T ++ 
Sbjct: 5   LIAVALVVGVLIGAVGVG-GILLIPALNLLAPL-------PIQASMATALFTFIFTGIVG 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
               +R G+I+  +         +   V +   + +D   L    A+  +L G+  L   
Sbjct: 57  TWFFQRRGSIDWSVTLPLCVGGALFGAVGAWANALLDAHLLGLVLAVLIVLAGVYTLLGG 116

Query: 146 RLYCERKFPDNY-----VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
                  F         + +  G +TGF SG  GVGG   +  +M+  G +   A   S 
Sbjct: 117 GARRRTAFEGRPQWRRALLFGIGALTGFGSGLTGVGGPALSVPMMVLSGFAPLTAIGASQ 176

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            V  L +    +  +  G             V++    ++    +    +   L++ +  
Sbjct: 177 VVQILASVSGSVGHLAHGI------------VDLELAALLTVFEVAGVWIGVHLAHAVDA 224

Query: 261 KYLTIGFSMIMFTTSF 276
             L      +      
Sbjct: 225 ALLRRAVGALCVAVGA 240



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 8/121 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+     L+G  SGL GVGG  + VP++                 A+G S  V    SV
Sbjct: 133 ALLFGIGALTGFGSGLTGVGGPALSVPMMVL--------SGFAPLTAIGASQVVQILASV 184

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + H  HG +++++             +   +   VD + L +A    C+ +G  +L 
Sbjct: 185 SGSVGHLAHGIVDLELAALLTVFEVAGVWIGVHLAHAVDAALLRRAVGALCVAVGAGLLL 244

Query: 144 R 144
           R
Sbjct: 245 R 245


>gi|227534549|ref|ZP_03964598.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302]
 gi|227187798|gb|EEI67865.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302]
          Length = 280

 Score = 82.4 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 102/291 (35%), Gaps = 50/291 (17%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + +++V   L G L  + G+GGG+++ P+L+           + +  A+G S+  + 
Sbjct: 1   MEQMIMLMVTGLLGGILGAVLGIGGGMIITPILTMLM-------GLPIQYAIGASIVSVI 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  + + + +   +N+++         +  V+ +++   VD   L   F    +    
Sbjct: 54  ATSSGATIAYLKDEMLNLRVAMFLEIATTVGAVIGAVVTGLVDGKVLYVLFGALLIFSAF 113

Query: 140 LMLKRDRLYCERKFPDN------------------------------YVKYIWGMVTGFL 169
            M+++ RL    +                                     +      G  
Sbjct: 114 NMIRKMRLKEPEERQSKPDEIANKLRLNGAYFDKATGKEINYTVTNVPGGFAMMFGAGIA 173

Query: 170 SGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG LG+G G F  + M       +  ++ATS  +  + A  +  V  + G     +    
Sbjct: 174 SGLLGIGSGAFKVIAMDTIMHMPLKPSSATSNLMMGVTAAASATVYYFGGQLQPQI---- 229

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                      +    ++   + +++  M+  K L + F  ++       A
Sbjct: 230 --------AAPLAIGILIGATVGSRIMPMLPTKVLRLIFIPVIGYMGIQMA 272



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV----AMGTSLGVIAPTSVMSF 86
           F +G  SGL G+G G   V           I     MH+    +  TS  ++  T+  S 
Sbjct: 168 FGAGIASGLLGIGSGAFKV-----------IAMDTIMHMPLKPSSATSNLMMGVTAAASA 216

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +   G +  +I       + I   V S ++  +    L   F      MGI M  +
Sbjct: 217 TVYYFGGQLQPQIAAPLAIGILIGATVGSRIMPMLPTKVLRLIFIPVIGYMGIQMALK 274


>gi|261420421|ref|YP_003254103.1| hypothetical protein GYMC61_3061 [Geobacillus sp. Y412MC61]
 gi|319768087|ref|YP_004133588.1| hypothetical protein GYMC52_3084 [Geobacillus sp. Y412MC52]
 gi|261376878|gb|ACX79621.1| protein of unknown function DUF81 [Geobacillus sp. Y412MC61]
 gi|317112953|gb|ADU95445.1| protein of unknown function DUF81 [Geobacillus sp. Y412MC52]
          Length = 300

 Score = 82.4 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 59/125 (47%), Gaps = 1/125 (0%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ +  F++GT+  L G+GGG+++VP L   F  +G   ++    A+GTSL VI    +
Sbjct: 4   MLLFLIGFIAGTVGSLAGLGGGVIIVPSLLF-FGALGWLSAVTPQTAVGTSLVVIIFNGL 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +   ++ +    +        V+ + + + +  +  +  F +F + M + +  
Sbjct: 63  SSTLSYMKDKMVDYQSGLLFCLGSVPGAVIGAWVNNTLSAAHFSLYFGLFLIAMSLFLSL 122

Query: 144 RDRLY 148
             +  
Sbjct: 123 SRKKT 127



 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 45/126 (35%), Gaps = 19/126 (15%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-------ASIYKATATSAGVSALIAFPA 210
           + ++ G + G +    G+GGG+     +LF+G        +   A  TS  V       +
Sbjct: 5   LLFLIGFIAGTVGSLAGLGGGVIIVPSLLFFGALGWLSAVTPQTAVGTSLVVIIFNGLSS 64

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            L  +      + +  +  G       L+    S+    +   ++  +   + ++ F + 
Sbjct: 65  TLSYM-----KDKMVDYQSG-------LLFCLGSVPGAVIGAWVNNTLSAAHFSLYFGLF 112

Query: 271 MFTTSF 276
           +   S 
Sbjct: 113 LIAMSL 118



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 7/78 (8%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP +   F+          HVA+ TS+ +I  +S++  + H   G +        I  
Sbjct: 207 LMVPAMIVLFRF-------PPHVAVATSMLMIFLSSLVGSLTHVAMGNVQWSFALALIPG 259

Query: 107 LPITTVVTSLMISHVDKS 124
           + I     + +   +   
Sbjct: 260 VWIGAKTGAWINKRMPSR 277


>gi|169829833|ref|YP_001699991.1| hypothetical protein Bsph_4410 [Lysinibacillus sphaericus C3-41]
 gi|168994321|gb|ACA41861.1| Hypothetical yrkJ protein [Lysinibacillus sphaericus C3-41]
          Length = 261

 Score = 82.4 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 101/263 (38%), Gaps = 18/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +I  I +  FL   +SG+ G+GG ++  P+L     L+G   +   H   G     + 
Sbjct: 3   ITWILTIFLIGFLGSFVSGMLGIGGAIINYPMLLYIPPLLGF-MAFSAHEVSGIIAIQVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+     +R+ G +N  ++      +   + V S     + ++ +N  + +  L+  +
Sbjct: 62  FASIAGVWVYRKGGYLNKSLIIYMGGAILTGSFVGSFGSKFLSEAGINIVYGVLALIAAV 121

Query: 140 LMLKRDR-----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
           +M    +        +  F       +  +V          GG +   ++++  G     
Sbjct: 122 MMFIPKKQIDDQPMQDVTFNKTLAILLAVVVGIGSGIVGAGGGFLLVPIMLVVLGIPTRM 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             ATS  ++ + +   ++ ++ +G                 A+++I+  S++  PL  K 
Sbjct: 182 TIATSLAITFISSIGGMVGKLMTGQVE-----------YFPALIMII-TSLIAAPLGAKA 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K L    +M++  T+  
Sbjct: 230 GKKLNTKSLQGILAMLILATAIK 252


>gi|145594616|ref|YP_001158913.1| hypothetical protein Strop_2084 [Salinispora tropica CNB-440]
 gi|145303953|gb|ABP54535.1| protein of unknown function DUF81 [Salinispora tropica CNB-440]
          Length = 299

 Score = 82.4 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 78/231 (33%), Gaps = 23/231 (9%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L            +    A+ TSL V+  TS +  + H R G I  +    +     
Sbjct: 31  VPLLVYV-------ADLPAKEAIATSLLVVGVTSAVGVLPHVRAGRIRWRTGLLFGTAGM 83

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV---KYIWGMV 165
               V   +   +  + L   FA+  L     M++  R   +   P         + G+V
Sbjct: 84  AGAYVGGRLAEFIPAAVLLTGFAVMMLATATAMIRGRRGTGDGAVPRELSVRRVLLDGVV 143

Query: 166 TGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            G ++G +G GGG      +    G  +  A  TS  V A+ +F  L   + S       
Sbjct: 144 VGLVTGMVGAGGGFLVVPALALLGGLPMPVAVGTSLVVIAMKSFAGLAGFLSSVS----- 198

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                  ++      +   ++  +    +L+  I +  L   F   +    
Sbjct: 199 -------IDWSLAATVTTAAVAGSIAGARLAGRIPEVVLRRTFGGFVVIAG 242



 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 7/122 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++   + G ++G+ G GGG ++VP L+           + M VA+GTSL VIA  S   
Sbjct: 137 VLLDGVVVGLVTGMVGAGGGFLVVPALALL-------GGLPMPVAVGTSLVVIAMKSFAG 189

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
                   +I+  +           ++  + +   + +  L + F  F ++ G+ ML + 
Sbjct: 190 LAGFLSSVSIDWSLAATVTTAAVAGSIAGARLAGRIPEVVLRRTFGGFVVIAGVFMLVQQ 249

Query: 146 RL 147
             
Sbjct: 250 VP 251


>gi|254384455|ref|ZP_04999796.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194343341|gb|EDX24307.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 292

 Score = 82.4 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 90/233 (38%), Gaps = 26/233 (11%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L                 A+ TSL V+  TS++  + H R G +  +    +  V  
Sbjct: 22  VPILVYL-------AGQDTKEAIATSLFVVGVTSLVGLVPHARAGRVRWRTGLIFGAVSM 74

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR-----LYCERKFPDNYVKYIWG 163
           +       +  ++  + L  AFA+  L     ML++ R          + P  +V  + G
Sbjct: 75  VGAYGGGRLAEYIPGTALLIAFALMMLATAAAMLRKSRKAKPAKPAHTELPVKHV-IVEG 133

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           +V G ++G +G GGG      +    G  +  A  TS  V A+ +F  L   + +G    
Sbjct: 134 LVVGAVTGLVGSGGGFLVVPALALLGGLPMSVAVGTSLLVIAMKSFSGLAGHL-NGVQ-- 190

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                    ++    L++ P +I+ + + ++ +  I +  L   F   +    
Sbjct: 191 ---------IDWNLALMVTPAAIVGSLIGSRFAGRIPQDTLRKAFGWFVVVMG 234



 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 13/146 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +IV   + G ++GL G GGG ++VP L+           + M VA+GTSL VIA  S   
Sbjct: 129 VIVEGLVVGAVTGLVGSGGGFLVVPALALL-------GGLPMSVAVGTSLLVIAMKSFSG 181

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H     I+  +         + +++ S     + +  L KAF  F ++MG+ +L + 
Sbjct: 182 LAGHLNGVQIDWNLALMVTPAAIVGSLIGSRFAGRIPQDTLRKAFGWFVVVMGVFVLSQQ 241

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSG 171
             +     P  +         G  + 
Sbjct: 242 VPHAIWASPLTW------TGIGLAAA 261


>gi|297528876|ref|YP_003670151.1| hypothetical protein GC56T3_0521 [Geobacillus sp. C56-T3]
 gi|297252128|gb|ADI25574.1| protein of unknown function DUF81 [Geobacillus sp. C56-T3]
          Length = 300

 Score = 82.4 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 59/125 (47%), Gaps = 1/125 (0%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ +  F++GT+  L G+GGG+++VP L   F  +G   ++    A+GTSL VI    +
Sbjct: 4   MLLFLIGFIAGTVGSLAGLGGGVIIVPSLLF-FGALGWLSAVTPQTAVGTSLVVIIFNGL 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +   ++ +    +        V+ + + + +  +  +  F +F + M + +  
Sbjct: 63  SSTLSYMKDKMVDYQSGLLFCLGSVPGAVIGAWVNNTLSAAHFSLYFGLFLIAMSLFLSL 122

Query: 144 RDRLY 148
             +  
Sbjct: 123 SQKKT 127



 Score = 53.5 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 45/126 (35%), Gaps = 19/126 (15%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-------ASIYKATATSAGVSALIAFPA 210
           + ++ G + G +    G+GGG+     +LF+G        +   A  TS  V       +
Sbjct: 5   LLFLIGFIAGTVGSLAGLGGGVIIVPSLLFFGALGWLSAVTPQTAVGTSLVVIIFNGLSS 64

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            L  +      + +  +  G       L+    S+    +   ++  +   + ++ F + 
Sbjct: 65  TLSYM-----KDKMVDYQSG-------LLFCLGSVPGAVIGAWVNNTLSAAHFSLYFGLF 112

Query: 271 MFTTSF 276
           +   S 
Sbjct: 113 LIAMSL 118



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 7/78 (8%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP +   F+          HVA+ TS+ +I  +S++  + H   G +        I  
Sbjct: 207 LMVPAMIVLFRF-------PPHVAVATSMLMIFLSSLVGSLTHVVMGNVQWSFALALIPG 259

Query: 107 LPITTVVTSLMISHVDKS 124
           + I     + +   +   
Sbjct: 260 VWIGAKTGAWINKRMPSR 277


>gi|327192624|gb|EGE59567.1| hypothetical conserved membrane protein [Rhizobium etli CNPAF512]
          Length = 243

 Score = 82.4 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 95/254 (37%), Gaps = 19/254 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I   F +  + G  G+  G++     + +    G+  +    +   T +     T+
Sbjct: 5   IFFFIAVGFCAQIVDGALGMAFGVLS----TTSLLAFGVPAANASAMTHVTEM----FTT 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H  H  ++ +++        I   V + +++++D   +    + + L +G+L+L
Sbjct: 57  AASGISHAYHRNVDWRLVARLAPAGMIGGAVGAYLLANIDGKVIAPFVSAYLLAIGLLIL 116

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            +      R+   ++     G+  G L    G G G      ++  G  + +   ++   
Sbjct: 117 YKAFRPPSRREVRDWAVPPVGLCGGMLDAIGGGGWGPVVTSTLIGRGHDLKRVIGSTNFT 176

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              +     L  I            +LG+  + + + ++   ++  P    L   +  + 
Sbjct: 177 EFAVTLTISLTFIL-----------TLGWSELNSAIGLIIGGVIAAPFGAILVKRLPVRP 225

Query: 263 LTIGFSMIMFTTSF 276
           L +  SM++ TTS 
Sbjct: 226 LMVAVSMVIITTSA 239


>gi|86606127|ref|YP_474890.1| hypothetical protein CYA_1459 [Synechococcus sp. JA-3-3Ab]
 gi|86554669|gb|ABC99627.1| putative membrane protein [Synechococcus sp. JA-3-3Ab]
          Length = 317

 Score = 82.4 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 58/292 (19%), Positives = 106/292 (36%), Gaps = 42/292 (14%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           VV+    + +    +G L+G  G+GGG ++VP+        GI        A+ TS   I
Sbjct: 20  VVEEGLALAIGGLAAGILAGFLGIGGGTILVPLQVSL----GIPPLQ----AVATSNFSI 71

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS+   +++ R G ++ K +         T  V +++ S +    L  AF +  L   
Sbjct: 72  LLTSLAGSIQNWRMGMLDPKRVILLGIPALFTAQVGAILASRLPGYLLLAAFGVLLLANI 131

Query: 139 ILMLKRD---------------------------RLYCERKFPDNYVKYIWGMVTGFLSG 171
            L+  R                            R   E + P    + + G   G L+G
Sbjct: 132 YLVELRKTVVAHAQALERPGVAAGGTDDAGELRDRPAAEGQMPRWLARTLTGGAAGLLAG 191

Query: 172 ALGVGGGIFTNLL-MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
             G+GGG+    L +L    ++  A  TS G   L A  A L     G  +     +  G
Sbjct: 192 LFGIGGGVILVPLQILLLRETLKVAIQTSLGAIVLTATAATLSHAGLGNWMANALGFGDG 251

Query: 231 FV-----NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            +      I  ++ +    ++   ++T+    +  + + + F   +   S  
Sbjct: 252 TIRQNVLWIPGLI-LGAGGLVGVQISTRTLPKLPDEIVGLLFRTFLAGLSLY 302



 Score = 42.0 bits (98), Expect = 0.100,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 27/121 (22%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
           FG+GGG+++VP+     +         + VA+ TSLG I  T+  + + H   G      
Sbjct: 193 FGIGGGVILVPLQILLLRE-------TLKVAIQTSLGAIVLTATAATLSHAGLGNWMANA 245

Query: 100 LKD----------WIFVLPITTVVTSLMISHVDKSFLNKA--------FAIFCLLMGILM 141
           L            WI  L +      L+   +    L K         F  F   + + +
Sbjct: 246 LGFGDGTIRQNVLWIPGLILGA--GGLVGVQISTRTLPKLPDEIVGLLFRTFLAGLSLYV 303

Query: 142 L 142
            
Sbjct: 304 F 304


>gi|50122123|ref|YP_051290.1| hypothetical protein ECA3201 [Pectobacterium atrosepticum SCRI1043]
 gi|49612649|emb|CAG76099.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
          Length = 245

 Score = 82.4 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 90/228 (39%), Gaps = 15/228 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G+   +  H+A GT+L +I P  ++ F+ +R+   I+ ++          +  + 
Sbjct: 25  AIPILGVLFGMDQHMAQGTALVMITPNVLIGFLRYRQRNRIDTRVALTMCAFATGSAYLA 84

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILML----KRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           + + S +D   L +AFA F L++    +     + R              + G+ +GF+S
Sbjct: 85  AHIASSIDVHHLQRAFATFLLVLAAYYMWQWYNKKRSQRSEIVLSTKYLPLLGVASGFMS 144

Query: 171 GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
           G   V       +++         A   + G++ ++  P  L  + S +   G   WS+G
Sbjct: 145 GIFTV---GGGLVVVPVLVTLFAFAQTQAQGMALILVVPGALAALLS-YSQAGNVDWSIG 200

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                  L +    I+       +++ +   YL   F +++       
Sbjct: 201 -------LPLALGGIVSVSWGVAVAHKLPVAYLRGAFCLMLIGVGIAM 241



 Score = 42.4 bits (99), Expect = 0.080,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 47/118 (39%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            + +    SG +SG+F VG              ++    +     A G +L ++ P ++ 
Sbjct: 132 YLPLLGVASGFMSGIFTVG-------GGLVVVPVLVTLFAFAQTQAQGMALILVVPGALA 184

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + + + G ++  I         ++      +   +  ++L  AF +  + +GI ML
Sbjct: 185 ALLSYSQAGNVDWSIGLPLALGGIVSVSWGVAVAHKLPVAYLRGAFCLMLIGVGIAML 242


>gi|303229785|ref|ZP_07316565.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a]
 gi|302515545|gb|EFL57507.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a]
          Length = 265

 Score = 82.0 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 95/273 (34%), Gaps = 29/273 (10%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            D +V +    IV  F +     + G GGGLV VP+    F            + +GTSL
Sbjct: 2   SDNIVLFYLFFIVVGFFTAMFGTIIGAGGGLVFVPLFMYWF------PEWSPSMIVGTSL 55

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
             +   ++   + + R   + +     +        ++ + M      +    AF  F L
Sbjct: 56  FSVMCNAISGSLAYLRQKKVYVSAALIFSISTFPGAILGARMSGWFTGNGFMFAFGCFML 115

Query: 136 LMGILMLKRDRLYCERKFP----------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
               L+  ++      +            +  +     ++ GF+S   G+GGG+     +
Sbjct: 116 CASFLIGFKNFGKKGERKEESLTKDQVTYNKPIGIAISVIVGFISSIFGIGGGLVHVPAL 175

Query: 186 LF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           ++  G   + ATATS  + A+     ++  +     +          + I A       +
Sbjct: 176 IYIMGFPTHLATATSHAILAVSTAVGVITHLIENHIVFN--------IAIPA----SIGA 223

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           I       +++  +  K +    S+ +F  +  
Sbjct: 224 IFGAQAGAQIAKRLKAKAILALMSIGVFALAIK 256



 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 50/136 (36%), Gaps = 7/136 (5%)

Query: 12  VFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
             L+KD V     + I  S + G +S +FG+GGGLV VP L               H+A 
Sbjct: 135 ESLTKDQVTYNKPIGIAISVIVGFISSIFGIGGGLVHVPALIYIMGF-------PTHLAT 187

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
            TS  ++A ++ +  + H     I   I               + +   +    +    +
Sbjct: 188 ATSHAILAVSTAVGVITHLIENHIVFNIAIPASIGAIFGAQAGAQIAKRLKAKAILALMS 247

Query: 132 IFCLLMGILMLKRDRL 147
           I    + I ++    +
Sbjct: 248 IGVFALAIKLIISSGI 263


>gi|294794285|ref|ZP_06759421.1| putative membrane protein [Veillonella sp. 3_1_44]
 gi|294454615|gb|EFG22988.1| putative membrane protein [Veillonella sp. 3_1_44]
          Length = 286

 Score = 82.0 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 94/271 (34%), Gaps = 28/271 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D +V +     +  FL+  +  + G GGGLV VP+    F            + +GTSL 
Sbjct: 25  DNIVVFYIFFTIVGFLAAMIGTIIGAGGGLVFVPLFMYWF------PEWSPSMVVGTSLF 78

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   ++   + + +   + +     +        ++ + M           AF  F L 
Sbjct: 79  SVMCNAISGSIAYLKQKKVYINAAIIFSLATFPGAILGAQMSGWFSGKGFMFAFGCFMLC 138

Query: 137 MGILMLKRDRLYCERKFP---------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
             +L+  ++    ERK              +        GF+S   G+GGG+     +++
Sbjct: 139 ASVLIGFKNFRKGERKEESLTLEQLSYSKPIGISISFFVGFISSIFGIGGGLIHVPALIY 198

Query: 188 Y-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
             G   + ATATS  + A+     ++  +                +     +     +I 
Sbjct: 199 LMGFPTHMATATSQSILAVSTTVGVITHLIES------------HIIFSIAIPTSIGAIF 246

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              +  +++  +  K +    S+ +F  +  
Sbjct: 247 GAQVGARIAKRLKAKAILALMSIAVFALAVR 277



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 7/123 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           + I  SF  G +S +FG+GGGL+ VP L               H+A  TS  ++A ++ +
Sbjct: 169 IGISISFFVGFISSIFGIGGGLIHVPALIYLMGF-------PTHMATATSQSILAVSTTV 221

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + H     I   I             V + +   +    +    +I    + + ++ +
Sbjct: 222 GVITHLIESHIIFSIAIPTSIGAIFGAQVGARIAKRLKAKAILALMSIAVFALAVRLILK 281

Query: 145 DRL 147
             +
Sbjct: 282 SGI 284


>gi|154687348|ref|YP_001422509.1| hypothetical protein RBAM_029470 [Bacillus amyloliquefaciens FZB42]
 gi|154353199|gb|ABS75278.1| YunE [Bacillus amyloliquefaciens FZB42]
          Length = 273

 Score = 82.0 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 46/272 (16%), Positives = 103/272 (37%), Gaps = 32/272 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++I+  F++GT+  L G+GGG+++VP +     +      +    A+GTSL VI  T +
Sbjct: 4   LILIILGFIAGTVGSLIGLGGGIIIVPAMLYLSTMTPFFHDVTPQTAIGTSLLVIIFTGL 63

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + ++ T++ K    +       +++ + +    +    +  F +F +L+ I ++ 
Sbjct: 64  SSTLAYMKYKTVDYKSGLIFFIGSGPGSIIGAYLSKLFNAHTFSVWFGLFMILISITLML 123

Query: 144 RDRLYCERKF-----------PDNYVKYIWGMVTGFLSG---------ALGVGGGIFTNL 183
           + +     K                  Y + + TG +               GG +    
Sbjct: 124 KAKAKPVNKAHKGMIRTYEDESGELYTYSYRIFTGIVIAFFVGLLGGLFGIGGGSLMVPA 183

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +      A ATS  +  L +    +  I              G VN    L ++P 
Sbjct: 184 MMLLFLFPPKVAVATSMLIIFLSSVTGSVSHIAE------------GHVNWLYALCLVPG 231

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +     +   ++  +  K + +   +++    
Sbjct: 232 AWFGGKMGAWVNKRVQTKTIVLFMRVVLILIG 263



 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 7/98 (7%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP +   F            VA+ TS+ +I  +SV   + H   G +N       +  
Sbjct: 179 LMVPAMMLLFLF-------PPKVAVATSMLIIFLSSVTGSVSHIAEGHVNWLYALCLVPG 231

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                 + + +   V    +     +  +L+G  ++ +
Sbjct: 232 AWFGGKMGAWVNKRVQTKTIVLFMRVVLILIGCELIYQ 269


>gi|271499890|ref|YP_003332915.1| hypothetical protein Dd586_1331 [Dickeya dadantii Ech586]
 gi|270343445|gb|ACZ76210.1| protein of unknown function DUF81 [Dickeya dadantii Ech586]
          Length = 254

 Score = 82.0 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 93/229 (40%), Gaps = 17/229 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G+   +  H+A GT+L +I P  ++ F+ +R+   I+ ++         ++  + 
Sbjct: 34  AIPVLGMLFGMNQHLAQGTALIMITPNVLIGFLRYRQRNKIDTRMTLMLCAFATVSAYIA 93

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILML----KRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           + M + +    L +AFAIF L++    +       R              + G+ +GF+S
Sbjct: 94  AHMAAAIQVDNLQQAFAIFLLVLAAYYIWQWVNSQRSRTPTSVLSARYLPVLGVASGFMS 153

Query: 171 GALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G   VGGG+     L+  +G +  +A   +  +    A  AL+          G   W+ 
Sbjct: 154 GIFTVGGGLVVVPALVTLFGFTQTQAQGIALALVVPGALAALVSY-----TQAGNVDWAT 208

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G       + +    IL       L++ +    L + F +++   + V 
Sbjct: 209 G-------IPLAIGGILSVSWGVALAHKLPVVALRLTFCLVLVGVAVVM 250



 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 7/121 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            + V    SG +SG+F VGGGLV+VP L   F             A G +L ++ P ++ 
Sbjct: 141 YLPVLGVASGFMSGIFTVGGGLVVVPALVTLFGF-------TQTQAQGIALALVVPGALA 193

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + + + + G ++            ++      +   +    L   F +  + + ++ML  
Sbjct: 194 ALVSYTQAGNVDWATGIPLAIGGILSVSWGVALAHKLPVVALRLTFCLVLVGVAVVMLVG 253

Query: 145 D 145
            
Sbjct: 254 K 254


>gi|47564716|ref|ZP_00235760.1| hypothetical protein BCE_G9241_0770 [Bacillus cereus G9241]
 gi|47558089|gb|EAL16413.1| unknown [Bacillus cereus G9241]
          Length = 254

 Score = 82.0 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 102/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + ++ L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSFVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTAHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + + +  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKTLVMYMGASILIGSFIGSFGANVLAEHTVNIVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R   +    + ++  +   + G  SG +G GG      +ML      I    AT
Sbjct: 120 MMFVPKRNNGDEVKYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRTTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVVIPALIIAIASIFAAPLGARVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAVKM 247


>gi|116493760|ref|YP_805494.1| permease [Lactobacillus casei ATCC 334]
 gi|191637002|ref|YP_001986168.1| Permease [Lactobacillus casei BL23]
 gi|239631015|ref|ZP_04674046.1| transport protein [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|116103910|gb|ABJ69052.1| Predicted permease [Lactobacillus casei ATCC 334]
 gi|190711304|emb|CAQ65310.1| Permease [Lactobacillus casei BL23]
 gi|239527298|gb|EEQ66299.1| transport protein [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|327381029|gb|AEA52505.1| hypothetical protein LC2W_0169 [Lactobacillus casei LC2W]
 gi|327384204|gb|AEA55678.1| hypothetical protein LCBD_0178 [Lactobacillus casei BD-II]
          Length = 280

 Score = 82.0 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 102/291 (35%), Gaps = 50/291 (17%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + +++V   L G L  + G+GGG+++ P+L+           + +  A+G S+  + 
Sbjct: 1   MEQMIMLMVTGLLGGILGAVLGIGGGMIITPILTMLM-------GLPIQYAIGASIVSVI 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  + + + +   +N+++         +  V+ +++   VD   L   F    +    
Sbjct: 54  ATSSGATIAYLKDEMLNLRVAMFLEIATTVGAVIGAVVTGLVDGKVLYVLFGALLIFSAF 113

Query: 140 LMLKRDRLYCERKFPDN------------------------------YVKYIWGMVTGFL 169
            M+++ R+    +                                     +      G  
Sbjct: 114 NMIRKMRMKEPEERQSKPDEIATKLRLNGAYFDKATGKEINYTVTNVPGGFAMMFGAGIA 173

Query: 170 SGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG LG+G G F  + M       +  ++ATS  +  + A  +  V  + G     +    
Sbjct: 174 SGLLGIGSGAFKVIAMDTIMHMPLKPSSATSNLMMGVTAAASATVYYFGGQLQPQI---- 229

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                      +    ++   + +++  M+  K L + F  ++       A
Sbjct: 230 --------AAPLAIGILIGATVGSRIMPMLPTKVLRLIFIPVIGYMGIQMA 272



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV----AMGTSLGVIAPTSVMSF 86
           F +G  SGL G+G G   V           I     MH+    +  TS  ++  T+  S 
Sbjct: 168 FGAGIASGLLGIGSGAFKV-----------IAMDTIMHMPLKPSSATSNLMMGVTAAASA 216

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +   G +  +I       + I   V S ++  +    L   F      MGI M  +
Sbjct: 217 TVYYFGGQLQPQIAAPLAIGILIGATVGSRIMPMLPTKVLRLIFIPVIGYMGIQMALK 274


>gi|89099982|ref|ZP_01172853.1| hypothetical Membrane Spanning Protein [Bacillus sp. NRRL B-14911]
 gi|89085374|gb|EAR64504.1| hypothetical Membrane Spanning Protein [Bacillus sp. NRRL B-14911]
          Length = 240

 Score = 82.0 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 51/242 (21%), Positives = 95/242 (39%), Gaps = 27/242 (11%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
              G L G  G GG   ++ +L+  F        + +H A+GTSL  +  T++     H 
Sbjct: 2   LFLGILLGFIGAGGSGFIIALLTVVF-------GVPIHTALGTSLAAMVFTTLSGAYSHY 54

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR------ 144
           R G I++K+         +T+ + S +   +    L+   A    L  +++L R      
Sbjct: 55  RQGNIDVKMGLAVGCFGAVTSFLGSGIAVWIPVDSLHWLTAGMLFLSAVMLLVRLFIVSR 114

Query: 145 -DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGV 202
            +    E +          G+V G LSG  G+G   F  L L+   G S+ K+  T+  V
Sbjct: 115 MEDKGAEPQRRLFMKAAFVGIVCGLLSGTFGIGSAPFIQLGLLAVLGLSVQKSVGTTMLV 174

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              IA    +              +  G+ ++  +L +L  +++ + L  + +  +    
Sbjct: 175 ILPIALAGGIGY------------YFEGYFDMILLLQVLAGTMIGSYLGARFTNYVPLPV 222

Query: 263 LT 264
           L 
Sbjct: 223 LK 224



 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 48/117 (41%), Gaps = 7/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
                + G LSG FG+G    +   L            + +  ++GT++ VI P ++   
Sbjct: 131 AFVGIVCGLLSGTFGIGSAPFIQLGLLAVL-------GLSVQKSVGTTMLVILPIALAGG 183

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + +   G  +M +L   +    I + + +   ++V    L  A  +  ++ G ++L 
Sbjct: 184 IGYYFEGYFDMILLLQVLAGTMIGSYLGARFTNYVPLPVLKSAMVLTPIMAGFILLF 240


>gi|229089839|ref|ZP_04221094.1| hypothetical protein bcere0021_6770 [Bacillus cereus Rock3-42]
 gi|228693464|gb|EEL47170.1| hypothetical protein bcere0021_6770 [Bacillus cereus Rock3-42]
          Length = 254

 Score = 82.0 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 103/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + +++  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNAMDKTLVVYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R   E    + ++  +   + G  SG +G GG      +ML      I +  AT
Sbjct: 120 MMFVPKRNNGEEVKYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRRTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVVMPALIIAIASIFAAPLGARVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAVKM 247


>gi|325282991|ref|YP_004255532.1| hypothetical protein Deipr_0758 [Deinococcus proteolyticus MRP]
 gi|324314800|gb|ADY25915.1| protein of unknown function DUF81 [Deinococcus proteolyticus MRP]
          Length = 251

 Score = 82.0 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 68/216 (31%), Gaps = 16/216 (7%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L  A   +G    I   +A+  S   +    +     + + G +  +    +  +   
Sbjct: 31  PALGLAADALGQPLPIAATIAV--SQVGVLAVGLSGAAGYLQRGLVRARTGYLYAPLTIA 88

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
             V+ SL+   +    +   FA   L     +L+  R   E      +     G   G +
Sbjct: 89  GGVIGSLLGLVLPGQAVATVFAGLLLYSAYRLLRGGRRVEEGGPESAWAAPSMGFA-GVM 147

Query: 170 SGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG LG+GGG     +M    G  + +A ATS  +  L A    L+    G     L    
Sbjct: 148 SGLLGIGGGTVQVPVMNLLGGLPLREAIATSTFIMGLTAVGNTLIYQAGGLLDPDL---- 203

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
                      +    +L       L   I    L 
Sbjct: 204 --------ACAVALGVLLGARAGAGLQERIPAAQLK 231



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 43/96 (44%), Gaps = 7/96 (7%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
            +G +SGL G+GGG V VPV++           + +  A+ TS  ++  T+V + + ++ 
Sbjct: 143 FAGVMSGLLGIGGGTVQVPVMNLL-------GGLPLREAIATSTFIMGLTAVGNTLIYQA 195

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            G ++  +       + +     + +   +  + L 
Sbjct: 196 GGLLDPDLACAVALGVLLGARAGAGLQERIPAAQLK 231


>gi|300693177|ref|YP_003749150.1| hypothetical protein RPSI07_mp0142 [Ralstonia solanacearum PSI07]
 gi|299075214|emb|CBJ34501.1| conserved membrane protein of unknown function, DUF81 [Ralstonia
           solanacearum PSI07]
          Length = 262

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 88/234 (37%), Gaps = 25/234 (10%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G    +  H+A GT+L +IAP  ++ F+ + +   + ++ +        ++T V 
Sbjct: 34  AIPILGYLYGMDQHLAQGTALVMIAPNVLIGFLRYHQRHPVPLRSVATLCAFAMVSTYVA 93

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF------------PDNYVKYIW 162
           +   + +D   L+ AFA F +++ +    + R                          + 
Sbjct: 94  ARFAAGLDADHLHTAFAWFLIVLAVYFASQLRDKAHPDPAAGHPAPEAPRAVPPAALPLL 153

Query: 163 GMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
           G+ +G +SG   VGGG+     L+  +G S  +A   +  +    +  AL     +    
Sbjct: 154 GIASGGMSGIFTVGGGLVVVPALVTLFGMSQTRAQGMALALVVPGSLIALATYAQA---- 209

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                   G V+ G  + +    +        L++      L + F  ++   +
Sbjct: 210 --------GHVSWGTGIPLALGGMASVSWGVALAHRFSPLRLRLVFCAVLVGAA 255



 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + +    SG +SG+F VGGGLV+VP L   F        +    A G +L ++ P S+
Sbjct: 148 AALPLLGIASGGMSGIFTVGGGLVVVPALVTLF-------GMSQTRAQGMALALVVPGSL 200

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++   + + G ++             +      +        L   F    +   + ML
Sbjct: 201 IALATYAQAGHVSWGTGIPLALGGMASVSWGVALAHRFSPLRLRLVFCAVLVGAAVAML 259


>gi|25026873|ref|NP_736927.1| hypothetical protein CE0317 [Corynebacterium efficiens YS-314]
 gi|259506064|ref|ZP_05748966.1| integral membrane protein [Corynebacterium efficiens YS-314]
 gi|23492153|dbj|BAC17127.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259166352|gb|EEW50906.1| integral membrane protein [Corynebacterium efficiens YS-314]
          Length = 284

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 82/223 (36%), Gaps = 16/223 (7%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            L+     +    A+  SL V+  TSV+S + H R G +  +    +         +  L
Sbjct: 32  PLLTYVAGMDAKEAIAASLFVVGTTSVVSTIAHARRGNVQWRTGLIFGVASMAGAFLGGL 91

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK---YIWGMVTGFLSGAL 173
           +   +    L  AFA+  +     ML+  +   +               G+  G ++G +
Sbjct: 92  LGGFIPSVILMLAFALMMIATATAMLRGRKQRADTGEKTALPLGKILAEGLAVGLVTGLV 151

Query: 174 GVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G GGG      +    G  +  A  TS  V ++ +F  L   + S              +
Sbjct: 152 GAGGGFLVVPALALLGGLPMPVAVGTSLLVISMKSFAGLAGYMTSVS------------L 199

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +   VL +   +++   +  +L+ ++ ++ L  GF + +    
Sbjct: 200 DWPLVLAVTGAALVGALIGARLTSVVPEQALRKGFGVFVLVMG 242



 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 7/124 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I+      G ++GL G GGG ++VP L+           + M VA+GTSL VI+  S   
Sbjct: 137 ILAEGLAVGLVTGLVGAGGGFLVVPALALL-------GGLPMPVAVGTSLLVISMKSFAG 189

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +    +++  ++        +  ++ + + S V +  L K F +F L+MG+ +L ++
Sbjct: 190 LAGYMTSVSLDWPLVLAVTGAALVGALIGARLTSVVPEQALRKGFGVFVLVMGVFILYQE 249

Query: 146 RLYC 149
               
Sbjct: 250 LPAP 253


>gi|294499907|ref|YP_003563607.1| hypothetical protein BMQ_3151 [Bacillus megaterium QM B1551]
 gi|295705291|ref|YP_003598366.1| hypothetical protein BMD_3176 [Bacillus megaterium DSM 319]
 gi|294349844|gb|ADE70173.1| putative membrane protein [Bacillus megaterium QM B1551]
 gi|294802950|gb|ADF40016.1| putative membrane protein [Bacillus megaterium DSM 319]
          Length = 263

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 94/263 (35%), Gaps = 18/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  +  +    F    L+G+ G+GG +V+ P+L     L+G+       VA G       
Sbjct: 3   VQLLITVFALGFFGSFLAGMLGIGGSVVLYPLLLFVPPLVGVGMFSAHEVA-GIGAVQSL 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             SV   + +++ G +N  ++      + + +++ S + +   +  +N  + +   +   
Sbjct: 62  FASVSGALAYKKGGYLNKPLILYMGISVLVGSLIGSTLSNSFSEGMINFIYGVMATIAAG 121

Query: 140 LMLKRDRLYCERKF----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYK 194
           LM    +               +      + G   G +G GG      +M       +  
Sbjct: 122 LMFMPKKNNPAADSFEVTFSKPLAAALAFLVGICGGIVGAGGAFLLVPIMITVLKIPVRV 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             A+S  V+ + +      ++ +              V +   L+I+  S+L  P+   +
Sbjct: 182 TIASSLAVTFISSMGTTFGKVMTHQ------------VLLLPALMIIGASLLAAPIGAFV 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
                   L +  ++++  TS  
Sbjct: 230 GQKTKVASLQVILAIVITATSLK 252



 Score = 38.5 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L    +FL G   G+ G GG  ++VP++    +       I + V + +SL V   +S+ 
Sbjct: 144 LAAALAFLVGICGGIVGAGGAFLLVPIMITVLK-------IPVRVTIASSLAVTFISSMG 196

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +         + +      I    +   + + +      + L    AI      + +   
Sbjct: 197 TTFGKVMTHQVLLLPALMIIGASLLAAPIGAFVGQKTKVASLQVILAIVITATSLKIWFD 256


>gi|303328314|ref|ZP_07358752.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
 gi|302861644|gb|EFL84580.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
          Length = 255

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 49/240 (20%), Positives = 79/240 (32%), Gaps = 28/240 (11%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G L G  GVGG              + +   +  H AMGT+L     T ++      RHG
Sbjct: 13  GGLIGTVGVGG--------ILLIPALNVLAGLSTHTAMGTALFSFIFTGLLGTWLFWRHG 64

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR------- 146
           +I+ +I         +     SL  +      L+       +  G+  L   R       
Sbjct: 65  SIDWRITIPVCLGGLLCGYPGSLANAAASARLLDLLLGAVIIFAGVYALFPARGGSLEYR 124

Query: 147 -LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
            +               G   GF SG  GVGG + +  LM+  G     A ATS  +   
Sbjct: 125 TVKGWGTLRQKLFLLAIGGAVGFGSGLTGVGGPVLSVPLMVIIGFPPLTAIATSQVIQIT 184

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
            A       +              GF++ G  L +    ++   +  +L++ I +  L  
Sbjct: 185 AALSGSAGNLAH------------GFIDTGTALWVTAAELVGVMVGARLAHSISQASLKK 232



 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 49/121 (40%), Gaps = 8/121 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++      G  SGL GVGG ++ VP++       G         A+ TS  +    ++
Sbjct: 136 LFLLAIGGAVGFGSGLTGVGGPVLSVPLMVII----GFPPLT----AIATSQVIQITAAL 187

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +  HG I+            +  +V + +   + ++ L K  ++ C+++G  ++ 
Sbjct: 188 SGSAGNLAHGFIDTGTALWVTAAELVGVMVGARLAHSISQASLKKVVSVVCIVVGAFIVL 247

Query: 144 R 144
           R
Sbjct: 248 R 248


>gi|312113844|ref|YP_004011440.1| hypothetical protein Rvan_1068 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311218973|gb|ADP70341.1| protein of unknown function DUF81 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 323

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 96/256 (37%), Gaps = 8/256 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+I+     G   GLFG  GGL + P L     L G+       ++  T+L ++ P ++ 
Sbjct: 12  LLILTGGFIGLCFGLFGQAGGLALAPALLIVLPLCGVTAEAAPRLSAATALAILIPVTIG 71

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM--- 141
                     I+   +        +  V+ +++  +VD   +        +L+ + +   
Sbjct: 72  QAEGKNSWKAIDWDFILLLAPSAAVGAVIAAMVADNVDGRIVALLLGSGPILLALRLSRH 131

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
                   + + P      +  +  G  +   GV  G+     +        KATAT++ 
Sbjct: 132 AGGGGADGQPRNPSLIALTLKTVAGGAFAALTGVSAGLVLAPAL-ARALPSAKATATASA 190

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI--- 258
           ++   AF A +  +     L   P    G + + A+  I   ++LI PLA +L   +   
Sbjct: 191 LTLPFAFTASVGALLVPAPLTCGPA-CAGVLFLPALAAIGMSAVLIAPLALRLRPFLLSG 249

Query: 259 GKKYLTIGFSMIMFTT 274
               L   F+M +  T
Sbjct: 250 PASRLMAVFAMALLCT 265


>gi|299068584|emb|CBJ39813.1| conserved membrane protein of unknown function, DUF81 [Ralstonia
           solanacearum CMR15]
          Length = 263

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 90/233 (38%), Gaps = 27/233 (11%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            ++G    +  H+A GT+L +IAP  ++ F+ + +   ++++ +        ++T V + 
Sbjct: 36  PILGYLYGMDQHLAQGTALVMIAPNVLIGFLRYHQRHPVHLRSVATLCAFAMVSTYVAAR 95

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLY-------------CERKFPDNYVKYIWG 163
             + +D   L  AFA F + + +    + R                 R  P   +  + G
Sbjct: 96  FAAGLDADHLRTAFAWFLIALAVYFASQLRDRPHPAPAAAHPESGAPRAMPPAAI-ALLG 154

Query: 164 MVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           + +G +SG   VGGG+     L+  +G S  +A   +  +    +  AL    ++     
Sbjct: 155 IASGGMSGIFTVGGGLVVVPALVTLFGMSQTRAQGMALALVVPGSLIALATYAHA----- 209

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                  G V+ G  + +    +        L++      L + F  ++   +
Sbjct: 210 -------GHVSWGTGIPLAAGGMASVSWGVALAHRFSPMRLRLVFCAVLVGAA 255



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I +    SG +SG+F VGGGLV+VP L   F        +    A G +L ++ P S+
Sbjct: 148 AAIALLGIASGGMSGIFTVGGGLVVVPALVTLF-------GMSQTRAQGMALALVVPGSL 200

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++   +   G ++             +      +        L   F    +   + ML
Sbjct: 201 IALATYAHAGHVSWGTGIPLAAGGMASVSWGVALAHRFSPMRLRLVFCAVLVGAAVAML 259


>gi|30260925|ref|NP_843302.1| hypothetical protein BA_0781 [Bacillus anthracis str. Ames]
 gi|47526068|ref|YP_017417.1| hypothetical protein GBAA_0781 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49183768|ref|YP_027020.1| hypothetical protein BAS0744 [Bacillus anthracis str. Sterne]
 gi|49476913|ref|YP_035037.1| hypothetical protein BT9727_0692 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|65318203|ref|ZP_00391162.1| COG0730: Predicted permeases [Bacillus anthracis str. A2012]
 gi|165872494|ref|ZP_02217128.1| putative membrane protein [Bacillus anthracis str. A0488]
 gi|167635949|ref|ZP_02394256.1| putative membrane protein [Bacillus anthracis str. A0442]
 gi|167641342|ref|ZP_02399594.1| putative membrane protein [Bacillus anthracis str. A0193]
 gi|170689131|ref|ZP_02880329.1| putative membrane protein [Bacillus anthracis str. A0465]
 gi|170708620|ref|ZP_02899060.1| putative membrane protein [Bacillus anthracis str. A0389]
 gi|177654709|ref|ZP_02936497.1| putative membrane protein [Bacillus anthracis str. A0174]
 gi|190568834|ref|ZP_03021737.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I]
 gi|218901994|ref|YP_002449828.1| hypothetical protein BCAH820_0876 [Bacillus cereus AH820]
 gi|227816347|ref|YP_002816356.1| hypothetical protein BAMEG_3776 [Bacillus anthracis str. CDC 684]
 gi|228932201|ref|ZP_04095087.1| hypothetical protein bthur0009_6810 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229600127|ref|YP_002865366.1| hypothetical protein BAA_0890 [Bacillus anthracis str. A0248]
 gi|254683019|ref|ZP_05146880.1| hypothetical protein BantC_04095 [Bacillus anthracis str.
           CNEVA-9066]
 gi|254725807|ref|ZP_05187589.1| hypothetical protein BantA1_25656 [Bacillus anthracis str. A1055]
 gi|254735088|ref|ZP_05192799.1| hypothetical protein BantWNA_07952 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254739918|ref|ZP_05197610.1| hypothetical protein BantKB_02674 [Bacillus anthracis str. Kruger
           B]
 gi|254753257|ref|ZP_05205293.1| hypothetical protein BantV_12348 [Bacillus anthracis str. Vollum]
 gi|254757171|ref|ZP_05209199.1| hypothetical protein BantA9_02559 [Bacillus anthracis str.
           Australia 94]
 gi|30254374|gb|AAP24788.1| putative membrane protein [Bacillus anthracis str. Ames]
 gi|47501216|gb|AAT29892.1| putative membrane protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177695|gb|AAT53071.1| membrane protein, putative [Bacillus anthracis str. Sterne]
 gi|49328469|gb|AAT59115.1| probable membrane protein [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|164711819|gb|EDR17362.1| putative membrane protein [Bacillus anthracis str. A0488]
 gi|167510733|gb|EDR86127.1| putative membrane protein [Bacillus anthracis str. A0193]
 gi|167528621|gb|EDR91381.1| putative membrane protein [Bacillus anthracis str. A0442]
 gi|170126506|gb|EDS95393.1| putative membrane protein [Bacillus anthracis str. A0389]
 gi|170666879|gb|EDT17644.1| putative membrane protein [Bacillus anthracis str. A0465]
 gi|172080523|gb|EDT65608.1| putative membrane protein [Bacillus anthracis str. A0174]
 gi|190560071|gb|EDV14053.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I]
 gi|218539638|gb|ACK92036.1| putative membrane protein [Bacillus cereus AH820]
 gi|227004240|gb|ACP13983.1| putative membrane protein [Bacillus anthracis str. CDC 684]
 gi|228827497|gb|EEM73245.1| hypothetical protein bthur0009_6810 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229264535|gb|ACQ46172.1| putative membrane protein [Bacillus anthracis str. A0248]
          Length = 254

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 103/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTAHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + +++  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKTLVVYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R   +    + ++  +   + G  SG +G GG      +ML      I +  AT
Sbjct: 120 MMFVPKRNNGDELKYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRRTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVVMPALIIAIASIFAAPLGARVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAVKM 247


>gi|282897511|ref|ZP_06305512.1| Protein of unknown function DUF81 [Raphidiopsis brookii D9]
 gi|281197606|gb|EFA72501.1| Protein of unknown function DUF81 [Raphidiopsis brookii D9]
          Length = 298

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 7/129 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++      GTL+GL GVGGG  +VP L              M  A+GTSL ++   ++
Sbjct: 175 LWLLTEGLGVGTLTGLIGVGGGFAIVPALVIL-------GKTPMKEAIGTSLLILVANAM 227

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
             F+ +     ++  ++  +I    + +     +   +D   L K F  F + +   +L 
Sbjct: 228 AGFLGYLGRVNLDWNLIGSFIVAASLGSFFGGYLSGFIDGRKLQKYFGYFLIAVAAFVLF 287

Query: 144 RDRLYCERK 152
           +++     K
Sbjct: 288 QNQTAAAGK 296



 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 82/273 (30%), Gaps = 63/273 (23%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
             A  ++     +    A+  +L ++   S++  + H ++  IN +    +     +   
Sbjct: 25  VLALPVLVYVMGVPTKSAIAMTLIIVGTVSLIGLIPHWKNRNINFRKAFIFGSATMLGAF 84

Query: 113 VTSLMIS--HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD--------------- 155
           + + +     +  +     FAI  L+   LM++R R   ++                   
Sbjct: 85  LGAKIAGLPFITDNLQMLLFAIVMLIAAFLMIRRSRQNPDKSSIKYQKDLEPRKDRSLDL 144

Query: 156 -----------------------------NYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
                                               G+  G L+G +GVGGG      ++
Sbjct: 145 DQGYPPQDQDIYQDDVYEHIYQPPVCKYCWLWLLTEGLGVGTLTGLIGVGGGFAIVPALV 204

Query: 187 FYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI--ILPI 243
             G   + +A  TS  +    A    L                LG VN+   LI   +  
Sbjct: 205 ILGKTPMKEAIGTSLLILVANAMAGFLGY--------------LGRVNLDWNLIGSFIVA 250

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           + L +     LS  I  + L   F   +   + 
Sbjct: 251 ASLGSFFGGYLSGFIDGRKLQKYFGYFLIAVAA 283


>gi|228913471|ref|ZP_04077102.1| hypothetical protein bthur0012_7120 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228846222|gb|EEM91243.1| hypothetical protein bthur0012_7120 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 254

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 103/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + +++  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNAMDKTLVVYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R   +    + ++  +   + G  SG +G GG      +ML      I +  AT
Sbjct: 120 MMFVPKRNNGDEVKYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRRTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVVMPALIIAIASIFAAPLGARVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAVKM 247


>gi|148642480|ref|YP_001272993.1| permease [Methanobrevibacter smithii ATCC 35061]
 gi|148551497|gb|ABQ86625.1| predicted permease [Methanobrevibacter smithii ATCC 35061]
          Length = 166

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 4/162 (2%)

Query: 120 HVDKSFLNKAFAIFCLLMGIL--MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
            +    L   F    L + I   M    +    R   +     + G++ G  SG LGVGG
Sbjct: 1   MLPTQILKIIFGCLLLFIAIRNLMSADKKTSKARAKFNLINIAVVGVLVGISSGLLGVGG 60

Query: 178 GIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G+F  L++   +G S+ +A   S+   +L A    +  I SGWG+N  P +SLG+V++  
Sbjct: 61  GVFIILILTVIFGFSMIEAIGISSVFISLTAIGGTVSYIISGWGVNPFP-YSLGYVSLVN 119

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             +I   S+ +     K+++ + +K L   F +++   S   
Sbjct: 120 FAVIAMFSVPLAYYGAKIAHKVPEKRLKQIFGLVVLYISLKM 161


>gi|228925958|ref|ZP_04089039.1| hypothetical protein bthur0010_6810 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228944525|ref|ZP_04106896.1| hypothetical protein bthur0007_6970 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229120419|ref|ZP_04249666.1| hypothetical protein bcere0016_7310 [Bacillus cereus 95/8201]
 gi|228663004|gb|EEL18597.1| hypothetical protein bcere0016_7310 [Bacillus cereus 95/8201]
 gi|228815193|gb|EEM61443.1| hypothetical protein bthur0007_6970 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228833670|gb|EEM79226.1| hypothetical protein bthur0010_6810 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 254

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 103/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + +++  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKTLVVYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R   +    + ++  +   + G  SG +G GG      +ML      I +  AT
Sbjct: 120 MMFVPKRNNGDELKYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRRTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVVMPALIIAIASIFAAPLGARVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAVKM 247


>gi|86159865|ref|YP_466650.1| hypothetical protein Adeh_3446 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776376|gb|ABC83213.1| protein of unknown function DUF81 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 255

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 87/262 (33%), Gaps = 26/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+      +GTL  L G+GGG+++VP+L+  F        +    A+  SL VI  +S 
Sbjct: 4   LLLAAVGLGAGTLGALMGIGGGIIVVPILTAGF-------GLPFRHAVAVSLVVIIASSS 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   +      +M++            ++ S +        L   FA   +   ++M +
Sbjct: 57  SAAASYVDRKLSDMRVGVVLELATVTGAMLGSAVAGLAPVGVLKALFAAVAVYSALVMWR 116

Query: 144 RDRLYCERKFPDNYVKYIWGMVT------GFLSGALGVGGGIFTNLLMLFYG-ASIYKAT 196
           R     +    + Y    WG         G +SG +GVGGG     +M          A 
Sbjct: 117 RRPASPQASEGEPYTVRRWGTGLGASAFAGAISGLIGVGGGFIKVPVMTLAMELPFKVAV 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           ATS  +  + A  +  V    G     +               ++        L   L  
Sbjct: 177 ATSNFMIGVTAAASAYVYYARGDLEVAV------------AAPVVVGVFAGARLGATLLG 224

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            I    L   FS ++       
Sbjct: 225 RIPAARLQAAFSALLVLLGGRM 246



 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 13/125 (10%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLV 213
              +    G+  G L   +G+GGGI    ++   +G     A A S  V    +  A   
Sbjct: 2   TALLLAAVGLGAGTLGALMGIGGGIIVVPILTAGFGLPFRHAVAVSLVVIIASSSSAAAS 61

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            +        L    +G       +++   ++    L + ++ +     L   F+ +   
Sbjct: 62  YV-----DRKLSDMRVG-------VVLELATVTGAMLGSAVAGLAPVGVLKALFAAVAVY 109

Query: 274 TSFVF 278
           ++ V 
Sbjct: 110 SALVM 114


>gi|229195119|ref|ZP_04321894.1| hypothetical protein bcere0001_6940 [Bacillus cereus m1293]
 gi|228588348|gb|EEK46391.1| hypothetical protein bcere0001_6940 [Bacillus cereus m1293]
          Length = 254

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 102/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTAHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + +++  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKTLVVYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R   +    + ++  +   + G  SG +G GG      +ML      I    AT
Sbjct: 120 MMFVPKRNNGDEVKYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRTTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVVIPALIIAIASIFAAPLGARVGKKI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAIKM 247


>gi|269138797|ref|YP_003295498.1| hypothetical protein ETAE_1446 [Edwardsiella tarda EIB202]
 gi|267984458|gb|ACY84287.1| hypothetical protein ETAE_1446 [Edwardsiella tarda EIB202]
          Length = 266

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 56/264 (21%), Positives = 99/264 (37%), Gaps = 13/264 (4%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ V    +  LS LFG+GGG+V+VPVL   F    +       +   TSL V+ 
Sbjct: 3   LGVLALLCVCGAATSLLSALFGLGGGIVLVPVLHVLFPHCEV------QLLAATSLSVVM 56

Query: 80  PTSVMSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            T+ ++ +   R     + ++L  W   +     +   +   +    +   FA   LLM 
Sbjct: 57  LTAFINVLAFWRQQARPDTRLLIWWALGVSAGMQLGVHISFLLPGKAILLIFAAILLLMA 116

Query: 139 ILMLKRDRLYCERKFPDNYVK---YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +  L+R R            +          G ++G  G+GGG     L+    A   + 
Sbjct: 117 LRNLRRPRQVAATAMSPRCTRNRGLGLCFAGGTVAGITGLGGGSVLAPLLSLLPAIPRRQ 176

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLP---PWSLGFVNIGAVLIILPISILITPLAT 252
            A       L+     +          G      W  G+VN+  VL +   ++L  PLA 
Sbjct: 177 VAVYCNWLLLLGSAVTVTTYLLRTPPTGAVLPGDWQFGYVNLSVVLPVFSCALLTQPLAM 236

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSF 276
           +L   + +      FS ++   + 
Sbjct: 237 RLRRQMSEARQRQAFSAVLSGMAL 260


>gi|315446689|ref|YP_004079568.1| permease [Mycobacterium sp. Spyr1]
 gi|315264992|gb|ADU01734.1| predicted permease [Mycobacterium sp. Spyr1]
          Length = 292

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 92/260 (35%), Gaps = 23/260 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L +  +   G   GL G GG ++ VP+L+           +    A+ TSL V+  T
Sbjct: 1   MIALTVGLAVFVGVALGLLGGGGSILTVPLLAYV-------AGMDAKQAIATSLLVVGVT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S +  + H R G +  +    +            ++   +  + L   FA+  +   + M
Sbjct: 54  SAIGAVSHARAGRVQWRTGLIFGAAGMAGAYAGGVLARFIPGTVLLIGFALMMIATAVAM 113

Query: 142 LKRDR---LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATA 197
           L+  +                   G+V G ++G +G GGG      +    G  +  A  
Sbjct: 114 LRGRKDTQATGTTHRLPVPKIIAEGLVVGLVTGLVGAGGGFLVVPALALLGGLPMPVAVG 173

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS  V A+ +F  L   + S              +N    L +   +++   +  +L+  
Sbjct: 174 TSLIVIAMKSFAGLGGYLTSVQ------------INWSLALAVTAAAVVGALIGARLTSK 221

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           I    L   F   +   S V
Sbjct: 222 IDPDALRKAFGWFVLAMSSV 241



 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 7/120 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II    + G ++GL G GGG ++VP L+           + M VA+GTSL VIA  S   
Sbjct: 134 IIAEGLVVGLVTGLVGAGGGFLVVPALALL-------GGLPMPVAVGTSLIVIAMKSFAG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +     IN  +         +  ++ + + S +D   L KAF  F L M  ++L ++
Sbjct: 187 LGGYLTSVQINWSLALAVTAAAVVGALIGARLTSKIDPDALRKAFGWFVLAMSSVILAQE 246


>gi|83589239|ref|YP_429248.1| hypothetical protein Moth_0371 [Moorella thermoacetica ATCC 39073]
 gi|83572153|gb|ABC18705.1| Protein of unknown function DUF81 [Moorella thermoacetica ATCC
           39073]
          Length = 271

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 106/279 (37%), Gaps = 44/279 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I++  FL+G L  + G+GGG+++VP L+  F        + +H A+G S+  +  TS  S
Sbjct: 3   ILIMGFLTGILGAMVGIGGGVLLVPFLTLVFH-------VPIHTAIGASIVAVIATSSTS 55

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +      N+++            ++  L  + + +  L+  FA+  +     M K+ 
Sbjct: 56  ASTYLESRLTNLRLGMTLETATATGGILGGLTAALLSRQVLSGIFAVALVGTAYSMFKKV 115

Query: 146 RLYCERK------------------------FPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
           +    R+                             +      + G +SG LG+GGG+  
Sbjct: 116 KGGQPREEVEDTGRLGSTFYDANLKREVRYNVKRLPLGLFISFIAGNISGLLGIGGGVIK 175

Query: 182 NLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             +M+   G  +  A ATS  +  + A  +  +             ++ GFV+       
Sbjct: 176 VPMMVLGMGVPMRAAAATSNFMIGVTAVASAYIY------------YTRGFVDPLIAAPT 223

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                L   L+++L+  +   +L    ++++   +   A
Sbjct: 224 AIGVFLGAMLSSRLAGRVNSNFLAKLLAVVLIFLAVQMA 262



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 38/88 (43%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            +M +   + M  A  TS  +I  T+V S   +   G ++  I       + +  +++S 
Sbjct: 177 PMMVLGMGVPMRAAAATSNFMIGVTAVASAYIYYTRGFVDPLIAAPTAIGVFLGAMLSSR 236

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +   V+ +FL K  A+  + + + M   
Sbjct: 237 LAGRVNSNFLAKLLAVVLIFLAVQMALS 264


>gi|301065336|ref|YP_003787359.1| putative permease [Lactobacillus casei str. Zhang]
 gi|300437743|gb|ADK17509.1| Predicted permease [Lactobacillus casei str. Zhang]
          Length = 280

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 102/291 (35%), Gaps = 50/291 (17%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + +++V   L G L  + G+GGG+++ P+L+           + +  A+G S+  + 
Sbjct: 1   MEQMIMLMVTGLLGGILGAVLGIGGGMIITPILTMLM-------GLPIQYAIGASIVSVI 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  + + + +   +N+++         +  V+ +++   VD   L   F    +    
Sbjct: 54  ATSSGATIGYLKDEMLNLRVAMFLEIATTVGAVIGAVVTGLVDGKVLYVLFGALLIFSAF 113

Query: 140 LMLKRDRLYCERKFPDN------------------------------YVKYIWGMVTGFL 169
            M+++ R+    +                                     +      G  
Sbjct: 114 NMIRKMRMKEPEERQSKPDEIATKLRLNGAYFDKATGKEINYTVTNVPGGFAMMFGAGIA 173

Query: 170 SGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG LG+G G F  + M       +  ++ATS  +  + A  +  V  + G     +    
Sbjct: 174 SGLLGIGSGAFKVIAMDTIMHMPLKPSSATSNLMMGVTAAASATVYYFGGQLQPQI---- 229

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                      +    ++   + +++  M+  K L + F  ++       A
Sbjct: 230 --------AAPLAIGILIGATVGSRIMPMLPTKVLRLIFIPVIGYMGIQMA 272



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV----AMGTSLGVIAPTSVMSF 86
           F +G  SGL G+G G   V           I     MH+    +  TS  ++  T+  S 
Sbjct: 168 FGAGIASGLLGIGSGAFKV-----------IAMDTIMHMPLKPSSATSNLMMGVTAAASA 216

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +   G +  +I       + I   V S ++  +    L   F      MGI M  +
Sbjct: 217 TVYYFGGQLQPQIAAPLAIGILIGATVGSRIMPMLPTKVLRLIFIPVIGYMGIQMALK 274


>gi|255530512|ref|YP_003090884.1| hypothetical protein Phep_0600 [Pedobacter heparinus DSM 2366]
 gi|255343496|gb|ACU02822.1| protein of unknown function DUF81 [Pedobacter heparinus DSM 2366]
          Length = 278

 Score = 81.3 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 112/287 (39%), Gaps = 45/287 (15%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            V+ +  +++  +FL+G +  L G+GGG++++P+L+           + +H A+G S+  
Sbjct: 2   SVLLFTIIVLAGAFLAGLVGSLTGLGGGVIIIPLLTLVL-------GVDIHYAIGASIIS 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +  TS  S   + + G  N++I         I+ ++ +++   ++ S++   F +  L  
Sbjct: 55  VIATSSGSAAAYVKEGITNIRIGMFLEIATTISAIIGAVVTVFINPSYIAVIFGLILLFS 114

Query: 138 GILMLKRDRLYCERKFPDN-------------------------YVKYIWGMVTGFLSGA 172
            ++M+++   + +                                  ++   V G +SG 
Sbjct: 115 AVMMVRKKVDHSDNDTSGKLAVFLKLNGTYPVDGTVKKYAVHNVLGGFLMMFVAGIISGL 174

Query: 173 LGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF 231
           LG+G G    + M          +T TS  +  + A  + +V ++ G    G+       
Sbjct: 175 LGIGSGALKVVAMDNIMRIPFKVSTTTSNFMMGVTAAASAIVYLHRGQIDPGI------- 227

Query: 232 VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 + +    +    + +K+        L + F++++   +   
Sbjct: 228 -----AMPVTIGVLFGATIGSKILVRTNTDKLKVVFAVVVTFLALQM 269



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F++G +SGL G+G G + V  +    +       I   V+  TS  ++  T+  S + + 
Sbjct: 166 FVAGIISGLLGIGSGALKVVAMDNIMR-------IPFKVSTTTSNFMMGVTAAASAIVYL 218

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I+  I       +     + S ++   +   L   FA+    + + M+  
Sbjct: 219 HRGQIDPGIAMPVTIGVLFGATIGSKILVRTNTDKLKVVFAVVVTFLALQMIYN 272


>gi|229154480|ref|ZP_04282597.1| hypothetical protein bcere0010_6770 [Bacillus cereus ATCC 4342]
 gi|228628878|gb|EEK85588.1| hypothetical protein bcere0010_6770 [Bacillus cereus ATCC 4342]
          Length = 265

 Score = 81.3 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 102/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 12  MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVF 70

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + + +  +N  +A    +  I
Sbjct: 71  FATFAGAWAYRKSNDMDKTLVVYMGASILIGSFIGSFGANVLAEHTVNVVYAALATIAAI 130

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R   +    + ++  +   + G  SG +G GG      +ML      I    AT
Sbjct: 131 MMFVPKRNNGDEMKYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRTTIAT 190

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LII   SI+  PL  ++   I
Sbjct: 191 SIAITFISSVGITTGKVITGQ------------VVVIPALIIAVASIIAAPLGARIGKRI 238

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 239 NQKALQYMLSILIVGTAVKM 258


>gi|229160501|ref|ZP_04288496.1| hypothetical protein bcere0009_12930 [Bacillus cereus R309803]
 gi|228622911|gb|EEK79742.1| hypothetical protein bcere0009_12930 [Bacillus cereus R309803]
          Length = 262

 Score = 81.3 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/258 (21%), Positives = 109/258 (42%), Gaps = 40/258 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T + 
Sbjct: 1   MLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGLS 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +H  ++ K             ++ S     +++   +  F +F + + IL++ R
Sbjct: 54  STLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGVFLIFVSILLMLR 113

Query: 145 DRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL- 183
           D+L           +R F DN    +              + GF+SG  G+GGG      
Sbjct: 114 DKLKPLSLSNMTVIKRSFTDNEGNTVNYQFPPLLAIFIAFIVGFISGLFGIGGGALLVPA 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +    + A ATS  +  L A  +    I            SLG V+    LI++P 
Sbjct: 174 MMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWIYALILIPG 221

Query: 244 SILITPLATKLSYMIGKK 261
           + +   +   ++  +  K
Sbjct: 222 AWIGGKIGAYINTKLSGK 239



 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  +++
Sbjct: 146 LLAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAI 198

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +S   H   G ++       I    I   + + + + +    +     I  +++G  ++
Sbjct: 199 VSSATHISLGNVSWIYALILIPGAWIGGKIGAYINTKLSGKAVINLLRIILIILGTRLI 257


>gi|311069733|ref|YP_003974656.1| putative integral inner membrane protein [Bacillus atrophaeus 1942]
 gi|310870250|gb|ADP33725.1| putative integral inner membrane protein [Bacillus atrophaeus 1942]
          Length = 273

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/272 (17%), Positives = 100/272 (36%), Gaps = 32/272 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++IV   ++GT+  L G+GGG+V+VP L            +   VA+GTSL VI  T +
Sbjct: 4   MILIVLGLIAGTVGSLIGLGGGIVIVPALLFLSSATPFFQDVTPQVAIGTSLLVIIFTGL 63

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + ++ T++ K    +       +++ + +    +    +  F IF +L+ + ++ 
Sbjct: 64  SSTLAYIKYKTVDYKSGLIFFIGSGPGSIIGAYVSKLFNSDSFSVWFGIFMILISVSLML 123

Query: 144 RDRLYCERKFPDNYVKY--------------------IWGMVTGFLSGALGVGGGIFTNL 183
           + +     K     ++                     I   V          GG +    
Sbjct: 124 KKKAKPLNKEHQGIIRTFRDDSGEPYTYSYNAAAGIAIAFAVGFLGGLFGIGGGSLMVPA 183

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +      A ATS  +  L +    +  + S            G V+    L ++P 
Sbjct: 184 MMLLFLFPPKVAVATSMFIIFLSSVTGSVSHVLS------------GHVDWLYALALIPG 231

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +     L   ++  +  K +     +++    
Sbjct: 232 AWFGGKLGAAINKRMQTKTIVATMRIVLILIG 263



 Score = 42.0 bits (98), Expect = 0.096,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 7/97 (7%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP +   F            VA+ TS+ +I  +SV   + H   G ++       I  
Sbjct: 179 LMVPAMMLLFLF-------PPKVAVATSMFIIFLSSVTGSVSHVLSGHVDWLYALALIPG 231

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                 + + +   +    +     I  +L+G  ++ 
Sbjct: 232 AWFGGKLGAAINKRMQTKTIVATMRIVLILIGCQLIY 268


>gi|172036956|ref|YP_001803457.1| hypothetical protein cce_2041 [Cyanothece sp. ATCC 51142]
 gi|171698410|gb|ACB51391.1| hypothetical protein cce_2041 [Cyanothece sp. ATCC 51142]
          Length = 258

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 82/215 (38%), Gaps = 19/215 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ TS   I  TS    +++ R G ++ + +        +T  +  ++ +++ +  L  A
Sbjct: 44  AVATSSLAIVITSSSGSIQNWRMGYLDFQRVMLLGIPAILTAQLGVIVANYIPEFALLTA 103

Query: 130 FAIFCLLMGI------LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
           F    +           ++         K  +       G + GFL+G  G+GGG+    
Sbjct: 104 FGFLLVFNIFLSNIRRQLVTASHQEAGNKLSEKLACLFTGGIGGFLAGLFGIGGGVIMVP 163

Query: 184 L-MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           L ML    +I  A  TS GV  + +  + +     G  LN    W +G       +I+  
Sbjct: 164 LQMLLLKETIKVAIQTSLGVIVITSISSCV-----GHALNNNVLWLVG-------VILGL 211

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             ++   ++ +    +  K +   F +++   S  
Sbjct: 212 GGLIGAQISARFLPRLPDKVVRFCFYVMLAMLSVY 246



 Score = 69.3 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              +    + G L+GLFG+GGG++MVP+     +         + VA+ TSLGVI  TS+
Sbjct: 137 LACLFTGGIGGFLAGLFGIGGGVIMVPLQMLLLKE-------TIKVAIQTSLGVIVITSI 189

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            S + H  +  +   +         I   +++  +  +    +   F +   ++ +   
Sbjct: 190 SSCVGHALNNNVLWLVGVILGLGGLIGAQISARFLPRLPDKVVRFCFYVMLAMLSVYTF 248


>gi|255263607|ref|ZP_05342949.1| membrane protein, putative [Thalassiobium sp. R2A62]
 gi|255105942|gb|EET48616.1| membrane protein, putative [Thalassiobium sp. R2A62]
          Length = 304

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 97/277 (35%), Gaps = 53/277 (19%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG +M P+L       GI  +    VA+ T    I  +S    + H R  T++
Sbjct: 28  SGMFGVGGGFLMTPLLFFI----GIPPA----VAVATEANQIVASSFSGVLAHFRRKTVD 79

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGILML--------- 142
           +K+    +    +   +   + +++         +   + +F  ++G LM          
Sbjct: 80  LKMGTVLMLGGLVGAALGVFIFNYLKSLGQVDLLVKLCYVVFLGVVGGLMFIESWRAIRR 139

Query: 143 -------------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
                               + +      +         G+V G L+  +GVGGG     
Sbjct: 140 SKANIVPTRKKHGWIHVLPFKTKFRVSGLYISVLPPLAVGVVVGILAAIMGVGGGFIMVP 199

Query: 184 LMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            M++  G        TS      +     ++   + +            V+I   +++L 
Sbjct: 200 AMIYLLGMPTKVVVGTSLFQIIFVTAFTTMLHATTNYT-----------VDIALAVLLLV 248

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             ++   + T++   +  + L I  ++++       A
Sbjct: 249 GGVIGAQIGTRIGVKMKAEQLRILLALMVLAVCGKLA 285



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +    + G L+ + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 176 LAVGVVVGILAAIMGVGGGFIMVPAMIYLL-------GMPTKVVVGTSLFQIIFVTAFTT 228

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H     T+++ +    +    I   + + +   +    L    A+  L +   +    
Sbjct: 229 MLHATTNYTVDIALAVLLLVGGVIGAQIGTRIGVKMKAEQLRILLALMVLAVCGKLAFDL 288

Query: 146 RLYCER 151
            +    
Sbjct: 289 LVQPSE 294


>gi|13541798|ref|NP_111486.1| permease [Thermoplasma volcanium GSS1]
 gi|14325213|dbj|BAB60138.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 249

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 101/262 (38%), Gaps = 26/262 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I+   L G L+G+ G  G + +VP LS         +   +  A+GTSL +   TS
Sbjct: 3   ILEFILLGILVGALTGITGSSGVVAVVPALSII-------NRYDVATAIGTSLFIDIVTS 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            + F+ + ++  +N  I+  +     I +     +   +    L   F  F LLMG+  +
Sbjct: 56  SIVFIVYLKNKNVNTSIMLPFAIGSIIGSQAGVRIAVSIPSFILKDVFGSFLLLMGVYSV 115

Query: 143 KRDRLYCERKFP------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKA 195
            R +     K           + +   ++    +G +G  GGI   + MLF +   +  A
Sbjct: 116 LRRKKNVTSKNSILGGKCKFLLAFSISIIISLATGLMGASGGIMYLIAMLFIFKEDVRVA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T+  +  + A        + G             +++ A ++I   S++      KL 
Sbjct: 176 VGTATALMIISASSGATGYFFYGR------------IDLIAGIVIGVTSLISGYFFAKLG 223

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
             I ++ +     ++ FT   +
Sbjct: 224 NKIKRETVNKVLIVMFFTIGII 245


>gi|308174931|ref|YP_003921636.1| integral inner membrane protein [Bacillus amyloliquefaciens DSM 7]
 gi|307607795|emb|CBI44166.1| putative integral inner membrane protein [Bacillus
           amyloliquefaciens DSM 7]
 gi|328554937|gb|AEB25429.1| integral inner membrane protein [Bacillus amyloliquefaciens TA208]
 gi|328913249|gb|AEB64845.1| putative integral inner membrane protein [Bacillus
           amyloliquefaciens LL3]
          Length = 273

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/272 (16%), Positives = 102/272 (37%), Gaps = 32/272 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++I+  F++GT+  L G+GGG+++VP +     +      +    A+GTSL VI  T +
Sbjct: 4   LILIILGFIAGTVGSLIGLGGGIIIVPAMLYLSTMTSFFHDVTPQTAIGTSLLVIIFTGL 63

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + ++ T++ K    +       +++ + +    +    +  F +F +L+ I ++ 
Sbjct: 64  SSTLAYMKYKTVDYKSGLIFFIGSGPGSIIGAYLSKLFNAHTFSVWFGLFMILISITLML 123

Query: 144 RDRLYCERKF-----------PDNYVKYIWGMVTGFLSG---------ALGVGGGIFTNL 183
           + +     K                  Y + + TG                 GG +    
Sbjct: 124 KAKAKPVNKAHKGIIRTYEDESGELYTYSYRIFTGIAIAFFVGLLGGLFGIGGGSLMVPA 183

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +      A ATS  +  L +    +  I              G VN    L ++P 
Sbjct: 184 MMLLFLFPPKVAVATSMLIIFLSSVTGSVSHIAE------------GHVNWLYALCLVPG 231

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +     +   ++  +  K + +   +++    
Sbjct: 232 AWFGGKMGAWVNKRVRTKTIVLFMRVVLILIG 263



 Score = 40.8 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 7/98 (7%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP +   F            VA+ TS+ +I  +SV   + H   G +N       +  
Sbjct: 179 LMVPAMMLLFLF-------PPKVAVATSMLIIFLSSVTGSVSHIAEGHVNWLYALCLVPG 231

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                 + + +   V    +     +  +L+G  ++ +
Sbjct: 232 AWFGGKMGAWVNKRVRTKTIVLFMRVVLILIGCELIYQ 269


>gi|206977272|ref|ZP_03238170.1| putative membrane protein [Bacillus cereus H3081.97]
 gi|217958370|ref|YP_002336918.1| hypothetical protein BCAH187_A0944 [Bacillus cereus AH187]
 gi|222094532|ref|YP_002528592.1| membrane protein [Bacillus cereus Q1]
 gi|229137592|ref|ZP_04266198.1| hypothetical protein bcere0013_7220 [Bacillus cereus BDRD-ST26]
 gi|206744588|gb|EDZ55997.1| putative membrane protein [Bacillus cereus H3081.97]
 gi|217066129|gb|ACJ80379.1| putative membrane protein [Bacillus cereus AH187]
 gi|221238590|gb|ACM11300.1| probable membrane protein [Bacillus cereus Q1]
 gi|228645818|gb|EEL02046.1| hypothetical protein bcere0013_7220 [Bacillus cereus BDRD-ST26]
          Length = 254

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 102/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTAHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + +++  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKTLVVYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R   +    + ++  +   + G  SG +G GG      +ML      I    AT
Sbjct: 120 MMFVPKRNNGDELKYNKWIASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRTTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVVIPALIIAIASIFAAPLGARVGKKI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAIKM 247


>gi|315301830|ref|ZP_07872863.1| integral membrane protein, putative [Listeria ivanovii FSL F6-596]
 gi|313629801|gb|EFR97901.1| integral membrane protein, putative [Listeria ivanovii FSL F6-596]
          Length = 246

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 120/255 (47%), Gaps = 24/255 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I    + +  +  +    G+GGG++++P+L     LMG+        +  T   +   T 
Sbjct: 3   IITYFLIALSTSVIGSFLGIGGGVILLPILL----LMGVSQGTAAFSSALTVFTMAIFT- 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN-KAFAIFCLLMGILM 141
             S    R+ G + + +          TT + +++   + ++        +  +L+ +++
Sbjct: 58  -CSIYYKRKQGDVGLAL--KIAITSIPTTFLGAMVNQMLPETVYRFLYGVLIVVLLLLMV 114

Query: 142 LKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATAT 198
            K+ R   +  F   Y  + +I+G++ GFL+G  G+GGG I   +L+L +  +   A+AT
Sbjct: 115 WKKKRHSEQPHFLSKYRIMPFIFGIIIGFLAGLFGIGGGPIVIPILLLIFMLNQKTASAT 174

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S+ V+ L +F ++      G        +S+G       + ++P +IL   + T+L+ ++
Sbjct: 175 SSYVTLLTSFASIGSYAIIGGS-----DFSIG-------IYMIPGAILGALIGTRLNKLL 222

Query: 259 GKKYLTIGFSMIMFT 273
            +K++ I F++++  
Sbjct: 223 DEKWIAILFNILLVA 237



 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 7/123 (5%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y  +  +   + G L+GLFG+GGG +++P+L   F L           A  TS  V   T
Sbjct: 130 YRIMPFIFGIIIGFLAGLFGIGGGPIVIPILLLIFMLN-------QKTASATSSYVTLLT 182

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  S   +   G  +  I    I    +  ++ + +   +D+ ++   F I  + +  L 
Sbjct: 183 SFASIGSYAIIGGSDFSIGIYMIPGAILGALIGTRLNKLLDEKWIAILFNILLVALFALN 242

Query: 142 LKR 144
           L +
Sbjct: 243 LIK 245


>gi|224477821|ref|YP_002635427.1| hypothetical protein Sca_2339 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222422428|emb|CAL29242.1| hypothetical protein SCA_2339 [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 252

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 102/242 (42%), Gaps = 15/242 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +I L++      G ++GL G+GG +++ P +     L G       ++A G +   + 
Sbjct: 3   IIHILLMLSIGVGGGFIAGLVGIGGSIIIYPAILLLPPLFG-TPEYSAYIASGLTSSQVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +++   ++  +    N  ++      +   +V  +++ + +    +N  +    +L  I
Sbjct: 62  FSTLSGSIKAIKEPDFNAPLVLYMGGGMLGGSVAGAMVANLLTTPVINAVYIGVAILALI 121

Query: 140 LMLKRDRLYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATA 197
           LM  + + + +     ++++    G V G ++G +G GG      ++L  +   +     
Sbjct: 122 LMFIKVKPHADAGHSYNHWLLIAVGAVIGLVAGIIGAGGAFIIIPVLLAIFKLPMNTVVT 181

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            S  ++ + A  +  +++              G+V +G  + ++  S++  P+  K+  +
Sbjct: 182 NSIVIACVSAIGSFAIKLMQ------------GYVPLGNAIFLIVGSVIFAPIGLKVGRL 229

Query: 258 IG 259
           + 
Sbjct: 230 LP 231


>gi|118476446|ref|YP_893597.1| hypothetical protein BALH_0711 [Bacillus thuringiensis str. Al
           Hakam]
 gi|196046725|ref|ZP_03113948.1| putative membrane protein [Bacillus cereus 03BB108]
 gi|229183115|ref|ZP_04310345.1| hypothetical protein bcere0004_6920 [Bacillus cereus BGSC 6E1]
 gi|118415671|gb|ABK84090.1| probable membrane protein [Bacillus thuringiensis str. Al Hakam]
 gi|196022437|gb|EDX61121.1| putative membrane protein [Bacillus cereus 03BB108]
 gi|228600254|gb|EEK57844.1| hypothetical protein bcere0004_6920 [Bacillus cereus BGSC 6E1]
          Length = 254

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 103/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTAHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + +++  +N  +A    +  I
Sbjct: 60  FATFAGAWTYRKSNAMDKTLVVYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R   +    + ++  +   + G  SG +G GG      +ML      I +  AT
Sbjct: 120 MMFVPKRNNGDELKYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRRTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVVMPALIIAIASIFAAPLGARVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAVKM 247


>gi|49184377|ref|YP_027629.1| hypothetical protein BAS1360 [Bacillus anthracis str. Sterne]
 gi|165872665|ref|ZP_02217295.1| putative membrane protein [Bacillus anthracis str. A0488]
 gi|167641636|ref|ZP_02399882.1| putative membrane protein [Bacillus anthracis str. A0193]
 gi|170706175|ref|ZP_02896636.1| putative membrane protein [Bacillus anthracis str. A0389]
 gi|177651404|ref|ZP_02934193.1| putative membrane protein [Bacillus anthracis str. A0174]
 gi|190568100|ref|ZP_03021010.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I]
 gi|227815702|ref|YP_002815711.1| hypothetical protein BAMEG_3122 [Bacillus anthracis str. CDC 684]
 gi|229602723|ref|YP_002865959.1| hypothetical protein BAA_1539 [Bacillus anthracis str. A0248]
 gi|254733802|ref|ZP_05191516.1| hypothetical protein BantWNA_01346 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254753897|ref|ZP_05205932.1| hypothetical protein BantV_15578 [Bacillus anthracis str. Vollum]
 gi|254758992|ref|ZP_05211019.1| hypothetical protein BantA9_11849 [Bacillus anthracis str.
           Australia 94]
 gi|270000574|ref|NP_843925.2| hypothetical protein BA_1470 [Bacillus anthracis str. Ames]
 gi|49178304|gb|AAT53680.1| membrane protein, putative [Bacillus anthracis str. Sterne]
 gi|164711609|gb|EDR17156.1| putative membrane protein [Bacillus anthracis str. A0488]
 gi|167510429|gb|EDR85829.1| putative membrane protein [Bacillus anthracis str. A0193]
 gi|170128709|gb|EDS97575.1| putative membrane protein [Bacillus anthracis str. A0389]
 gi|172082682|gb|EDT67745.1| putative membrane protein [Bacillus anthracis str. A0174]
 gi|190560834|gb|EDV14809.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I]
 gi|227006159|gb|ACP15902.1| putative membrane protein [Bacillus anthracis str. CDC 684]
 gi|229267131|gb|ACQ48768.1| putative membrane protein [Bacillus anthracis str. A0248]
 gi|269850270|gb|AAP25411.2| putative membrane protein [Bacillus anthracis str. Ames]
          Length = 266

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 57/275 (20%), Positives = 112/275 (40%), Gaps = 40/275 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T +
Sbjct: 4   IMLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGL 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ 
Sbjct: 57  SSTLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLIL 116

Query: 144 RDRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL 183
           RD+L           +R F DN    +              + GF+SG  G+GGG     
Sbjct: 117 RDKLKPLSLSNMTVIKRSFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGIGGGALLVP 176

Query: 184 -LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            +ML +    + A ATS  +  L A  +    I            SLG V+    LI++P
Sbjct: 177 AMMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWIYALILIP 224

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + +   +   ++  +  K +     + +      
Sbjct: 225 GAWIGGKIGAYINTKLSGKAVINLLRITLIILGTR 259


>gi|300853972|ref|YP_003778956.1| hypothetical protein CLJU_c07860 [Clostridium ljungdahlii DSM
           13528]
 gi|300434087|gb|ADK13854.1| putative membrane protein [Clostridium ljungdahlii DSM 13528]
          Length = 252

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 101/253 (39%), Gaps = 31/253 (12%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II+  F+ G   G  G GG   ++ +L+  F          +HV++GT+L  +  +S+  
Sbjct: 5   IILVMFIVGIALGFVGAGGSGFIISILTVIFGF-------TIHVSLGTALAAMIFSSISG 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H R G   +K+         I +  +S   + +  S L    +    L  +++  R 
Sbjct: 58  AFSHYREGDAVLKVGLAVGIFGAIGSWTSSNFSAIIPASELKWMTSGMLYLSALILWIRM 117

Query: 146 RLYCERK-------FPDNYVKYI----WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIY 193
            +  +R         P+    +I     G+VTG +SG  G+G   F  + LM   G S+ 
Sbjct: 118 FIIEKRHSSQDKNSLPNGMSFWIRACGIGLVTGTISGLFGIGSACFIQIGLMFILGMSVR 177

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           ++  T+  V   IA                   + LG+++I  ++ ++  +I  + +  K
Sbjct: 178 QSVGTTMMVIIPIALAGGAGY------------YHLGYLDIHLLIEVVVGTITGSYIGAK 225

Query: 254 LSYMIGKKYLTIG 266
            +  +    L + 
Sbjct: 226 FTKRVPIPILKVA 238



 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 47/113 (41%), Gaps = 7/113 (6%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             ++GT+SGLFG+G    +   L            + +  ++GT++ VI P ++     +
Sbjct: 146 GLVTGTISGLFGIGSACFIQIGLMFIL-------GMSVRQSVGTTMMVIIPIALAGGAGY 198

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              G +++ +L + +      + + +     V    L  A  +  +    L++
Sbjct: 199 YHLGYLDIHLLIEVVVGTITGSYIGAKFTKRVPIPILKVAMLLVPITAATLLI 251


>gi|196037452|ref|ZP_03104763.1| putative membrane protein [Bacillus cereus NVH0597-99]
 gi|196031694|gb|EDX70290.1| putative membrane protein [Bacillus cereus NVH0597-99]
          Length = 254

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 103/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + +++  +N  +A    +  I
Sbjct: 60  FATFAGAWTYRKSNAMDKTLVVYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R   +    + ++  +   + G  SG +G GG      +ML      I +  AT
Sbjct: 120 MMFVPKRNNGDELKYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRRTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVVMPALIIAIASIFAAPLGARVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAVKM 247


>gi|283469291|emb|CAQ48502.1| domain of unknown function, putative [Staphylococcus aureus subsp.
           aureus ST398]
          Length = 243

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 100/235 (42%), Gaps = 14/235 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++V   L G +SGL G+GG +V+          +    +   ++A G +   +  +++  
Sbjct: 1   MLVIGILGGFISGLVGIGGAIVIY-PALLLLPPLFGLPTYSAYIASGLTSSQVFFSTLSG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            +   ++   +  ++ +    + I +++ +++ + ++  F+N  + I  LL  ILM  + 
Sbjct: 60  SLNAYKNKNFSRTLILNMGSGMVIGSMLGAILANLINVQFVNTVYIIIALLALILMFIKV 119

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSA 204
                    +  +    G + G +SG +G GG       L++ +   +      S  ++ 
Sbjct: 120 TPSTSHIKFNRLLLITIGGIIGLVSGIVGAGGAFIIIPVLLVIFKLPMNMVVTNSIVIAF 179

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           + +  A ++++              G++ I + + ++  SIL TPL  K+   I 
Sbjct: 180 ISSIGAFMIKLLQ------------GYIPINSAIPLILGSILFTPLGMKMGQKIP 222



 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+I    + G +SG+ G GG  +++PVL   F+L        M++ +  S+ +   +S+
Sbjct: 131 LLLITIGGIIGLVSGIVGAGGAFIIIPVLLVIFKL-------PMNMVVTNSIVIAFISSI 183

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
            +FM     G I +      I    + T +   M   + 
Sbjct: 184 GAFMIKLLQGYIPINSAIPLILGSILFTPLGMKMGQKIP 222


>gi|49477238|ref|YP_035668.1| hypothetical protein BT9727_1334 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|167634352|ref|ZP_02392673.1| putative membrane protein [Bacillus anthracis str. A0442]
 gi|170689264|ref|ZP_02880460.1| putative membrane protein [Bacillus anthracis str. A0465]
 gi|196039064|ref|ZP_03106371.1| putative membrane protein [Bacillus cereus NVH0597-99]
 gi|196047709|ref|ZP_03114912.1| putative membrane protein [Bacillus cereus 03BB108]
 gi|225863414|ref|YP_002748792.1| hypothetical protein BCA_1509 [Bacillus cereus 03BB102]
 gi|254682386|ref|ZP_05146247.1| hypothetical protein BantC_00853 [Bacillus anthracis str.
           CNEVA-9066]
 gi|254721229|ref|ZP_05183019.1| hypothetical protein BantA1_02075 [Bacillus anthracis str. A1055]
 gi|254740506|ref|ZP_05198197.1| hypothetical protein BantKB_05718 [Bacillus anthracis str. Kruger
           B]
 gi|300118501|ref|ZP_07056240.1| hypothetical protein BCSJ1_14390 [Bacillus cereus SJ1]
 gi|301053090|ref|YP_003791301.1| membrane protein [Bacillus anthracis CI]
 gi|49328794|gb|AAT59440.1| conserved hypothetical protein, possible membrane protein [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|167530240|gb|EDR92966.1| putative membrane protein [Bacillus anthracis str. A0442]
 gi|170666819|gb|EDT17586.1| putative membrane protein [Bacillus anthracis str. A0465]
 gi|196021459|gb|EDX60163.1| putative membrane protein [Bacillus cereus 03BB108]
 gi|196030209|gb|EDX68809.1| putative membrane protein [Bacillus cereus NVH0597-99]
 gi|225787896|gb|ACO28113.1| putative membrane protein [Bacillus cereus 03BB102]
 gi|298724025|gb|EFI64728.1| hypothetical protein BCSJ1_14390 [Bacillus cereus SJ1]
 gi|300375259|gb|ADK04163.1| conserved hypothetical membrane protein [Bacillus cereus biovar
           anthracis str. CI]
          Length = 266

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 57/275 (20%), Positives = 112/275 (40%), Gaps = 40/275 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T +
Sbjct: 4   IMLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGL 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ 
Sbjct: 57  SSTLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLML 116

Query: 144 RDRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL 183
           RD+L           +R F DN    +              + GF+SG  G+GGG     
Sbjct: 117 RDKLKPLSLSNMTVIKRSFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGIGGGALLVP 176

Query: 184 -LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            +ML +    + A ATS  +  L A  +    I            SLG V+    LI++P
Sbjct: 177 AMMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWIYALILIP 224

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + +   +   ++  +  K +     + +      
Sbjct: 225 GAWIGGKIGAYINTKLSGKAVINLLRITLIILGTR 259


>gi|119945839|ref|YP_943519.1| hypothetical protein Ping_2179 [Psychromonas ingrahamii 37]
 gi|119864443|gb|ABM03920.1| hypothetical protein DUF81 [Psychromonas ingrahamii 37]
          Length = 259

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 100/261 (38%), Gaps = 28/261 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L++    ++G +  + G GGG++ VP L            +  H+ +GT+      +S 
Sbjct: 12  ALLVFVGLIAGFIDAVVG-GGGMLTVPTLLSL--------GLPAHLTLGTNKLSACFSSG 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++   + R    N +  K+  +       + ++ ++ +D  +L K   +  L++ +  L 
Sbjct: 63  IASYTYFRKQLFNPQFWKNSFYSTLTGAFIGTVFVNLIDTQWLEKILPVIILIVALYTLL 122

Query: 144 R------DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL-MLFYGASIYKAT 196
                  +    E K      + I G + GF  G+ G G G F  +  M  Y  +I  ++
Sbjct: 123 NQIHDIDNHKLPENKSIFRIKQIIQGFLLGFYDGSSGPGTGAFWVISNMRLYKLNILLSS 182

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++      +LL+ IY G             VN    L +    +L   +    + 
Sbjct: 183 GIAKAMNFTSNVTSLLIFIYFGQ------------VNWLIGLTMGACLMLGAYIGAHSAI 230

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G K++   F +I+   +  
Sbjct: 231 HFGAKFIRPVFILIVVIMAIK 251


>gi|149909081|ref|ZP_01897739.1| hypothetical protein PE36_17470 [Moritella sp. PE36]
 gi|149807832|gb|EDM67777.1| hypothetical protein PE36_17470 [Moritella sp. PE36]
          Length = 259

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/266 (18%), Positives = 100/266 (37%), Gaps = 28/266 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
               ++   + ++G +  + G GGGL+ VP L            +  H+A+GT+    + 
Sbjct: 9   SVFIILCSVALVAGFIDAIAG-GGGLLTVPALL--------SAGLPPHLALGTNKLAASF 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   +    N K          I  +  +L+++ +  ++L+K   +  +   I 
Sbjct: 60  GSCAAAITFYKKRLFNPKFWWRSFVFTAIGAICGTLVVNVISTAWLDKLLPVIIIFTAIY 119

Query: 141 -MLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIY 193
            +  + + +     PD     +  + + G + GF  G  G G G F T   M  Y  +I 
Sbjct: 120 SIFSKTQEHTGETLPDDNPALHKKQGLQGYIIGFYDGVAGPGTGAFWTVSTMALYKLNIL 179

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+  +  ++    F +LL  IY            LG +N    L +    ++       
Sbjct: 180 FASGVAKAMNFTSNFTSLLTFIY------------LGHINWYLGLSMGLCIMVGAIAGAH 227

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +   G K++   F  ++   +   A
Sbjct: 228 TAIHFGAKFIRPLFITVVIIIACKLA 253


>gi|19551303|ref|NP_599305.1| hypothetical protein NCgl0052 [Corynebacterium glutamicum ATCC
           13032]
 gi|62388948|ref|YP_224350.1| hypothetical protein cg0072 [Corynebacterium glutamicum ATCC 13032]
 gi|41324281|emb|CAF18621.1| conserved hypothetical membrane protein [Corynebacterium glutamicum
           ATCC 13032]
          Length = 248

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 91/228 (39%), Gaps = 20/228 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L+           +    A+  SL ++  TS++S + H R+G +  K    +     
Sbjct: 31  VPILTYV-------AGLEPREAIAASLFIVGTTSLVSAISHARNGRVRWKTGLLFGAAGM 83

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           +      ++  ++  + L  AFA+  +     ML+  +          +   + G+V G 
Sbjct: 84  VGAFGGGVLGGYIPGTILMIAFALMMIATSTAMLRGRKQKKGASKSSLWRVLVDGLVVGA 143

Query: 169 LSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           ++G +G GGG      +    G S+  A  TS  V  + +F  L   + S          
Sbjct: 144 VTGLVGAGGGFLVVPALALLGGLSMPVAVGTSLVVITMKSFAGLAGYLTSVQ-------- 195

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
               ++ G VL++   +I+ +   ++L+  + +  L  GF + +    
Sbjct: 196 ----LDWGLVLMVTAAAIVGSLAGSRLAGRVPETLLRKGFGVFVLVMG 239



 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 7/120 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++V   + G ++GL G GGG ++VP L+           + M VA+GTSL VI   S
Sbjct: 131 LWRVLVDGLVVGAVTGLVGAGGGFLVVPALALL-------GGLSMPVAVGTSLVVITMKS 183

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                 +     ++  ++        + ++  S +   V ++ L K F +F L+MG+ +L
Sbjct: 184 FAGLAGYLTSVQLDWGLVLMVTAAAIVGSLAGSRLAGRVPETLLRKGFGVFVLVMGVFVL 243


>gi|218462721|ref|ZP_03502812.1| hypothetical conserved membrane protein [Rhizobium etli Kim 5]
          Length = 243

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 94/254 (37%), Gaps = 19/254 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I   F +  + G  G+  G++     + +    G+  +    +   T +     T+
Sbjct: 5   IFFFIAVGFCAQIVDGALGMAFGVLS----TTSLLAFGVPAANASAMTHVTEM----FTT 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H  H  ++ +++        I   + + +++++D   +    + + + +G+L+L
Sbjct: 57  AASGLSHAYHRNVDWRLVARLAPAGMIGGAIGAYLLANIDGKVIEPFVSAYLIAIGLLIL 116

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            +      R+   ++     G   G L    G G G      ++  G  + +   ++   
Sbjct: 117 YKAFRPQIRREVRDWAVPPVGFFGGVLDAIGGGGWGPVVTSTLVGRGHDLKRVIGSTNFT 176

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              +     +  +            +LG+  + + + ++   ++  P    L   +  + 
Sbjct: 177 EFAVTLTISVTFVV-----------TLGWSELNSAIGLIIGGVIAAPFGAILVKRLPVRA 225

Query: 263 LTIGFSMIMFTTSF 276
           L +  SM++ TTS 
Sbjct: 226 LMVAVSMVIITTSA 239


>gi|319399974|gb|EFV88216.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
          Length = 246

 Score = 80.5 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 107/252 (42%), Gaps = 14/252 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++++     G +SGL G+GG +++   +      +    +   ++A G +   +  ++
Sbjct: 1   MIIMLLIGIFGGFISGLVGIGGAIIIY-PMLLLLPPLVGLPTYSAYIASGLTSSQVFFST 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +    +  ++   +  ++ +    + I +++ +++ + ++  F+N  + I  LL  ILM 
Sbjct: 60  LSGSFKAYKNKDFSRTLVLNMGSGMIIGSILGAILANLINVQFVNMVYIIIALLALILMF 119

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAG 201
            +          +  +    G + G +SG +G GG       L++ +   +      S  
Sbjct: 120 IKVAPSTSHIKFNRLLLITIGGIIGLVSGIVGAGGAFIIIPVLLVIFKLPMKTVVTNSIV 179

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           ++ + +  A ++++              G++ + + + ++  SIL TPL  K+   I   
Sbjct: 180 IAFISSVGAFIIKLLQ------------GYIPVNSAIPLILGSILFTPLGMKIGQKIPDY 227

Query: 262 YLTIGFSMIMFT 273
              +  S+++  
Sbjct: 228 IQKMIVSILIVI 239


>gi|304394044|ref|ZP_07375967.1| permease [Ahrensia sp. R2A130]
 gi|303293484|gb|EFL87861.1| permease [Ahrensia sp. R2A130]
          Length = 329

 Score = 80.5 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 99/292 (33%), Gaps = 56/292 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++       G LSG+FGVGGG +M P+L           +I   VA+ T    I  +S
Sbjct: 37  ILVLFGMGAGVGFLSGMFGVGGGFLMTPLLIFY--------NIPPAVAVATEANQIVASS 88

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFCLLM 137
               + H R GT+++K+    +      +V+   + S + K+      ++  + +F   +
Sbjct: 89  FSGALAHFRRGTVDIKLGVVLLIGGIAGSVIGVAIFSELRKAGQLDLIISILYVVFLGSI 148

Query: 138 GILM-------LKRDRLYCERKFP------------------------DNYVKYIWGMVT 166
           G LM       +++ R   E   P                              + GM+ 
Sbjct: 149 GTLMCIESINAIRKSRRSPEEVAPLPEQKNWITNLPFKVRFEKSQLYLSVIPILVLGMLV 208

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G L+  +GVGGG      M++           TS      +     + +  +        
Sbjct: 209 GILASIMGVGGGFIMVPAMIYLLRVPTNVVIGTSLFQIMFVTAFTTIAQSATNQT----- 263

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                 V++    I++   ++      +    +  + L     +I+      
Sbjct: 264 ------VDVVLAFILMVGGVIGAQFGARAGTKLKGEQLRALLGLIVLAVCAR 309



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 52/136 (38%), Gaps = 8/136 (5%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
           N    V   K  +   +  I+V   L G L+ + GVGGG +MVP +    +       + 
Sbjct: 182 NLPFKVRFEKSQLYLSVIPILVLGMLVGILASIMGVGGGFIMVPAMIYLLR-------VP 234

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
            +V +GTSL  I   +  + +     + T+++ +    +    I     +   + +    
Sbjct: 235 TNVVIGTSLFQIMFVTAFTTIAQSATNQTVDVVLAFILMVGGVIGAQFGARAGTKLKGEQ 294

Query: 126 LNKAFAIFCLLMGILM 141
           L     +  L +   +
Sbjct: 295 LRALLGLIVLAVCARL 310


>gi|73538931|ref|YP_299298.1| hypothetical protein Reut_B5106 [Ralstonia eutropha JMP134]
 gi|72122268|gb|AAZ64454.1| Protein of unknown function DUF81 [Ralstonia eutropha JMP134]
          Length = 255

 Score = 80.5 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 92/235 (39%), Gaps = 23/235 (9%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           +P L   F +          +A GT+L +IAP  ++ F ++R+   I +++         
Sbjct: 35  IPALGLLFGMDD------QQLAQGTALVMIAPNVLIGFWQYRKRADIALRMALMLGLSAV 88

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL----YCERKFPDNYVKYIWGM 164
           + T +++ + + +D   L + FA F + + +  L R         +          + G+
Sbjct: 89  LATYLSARLATSMDAQLLRRIFAGFMIGLALYFLWRLLPGRAITAQHARVSPRWIPLVGV 148

Query: 165 VTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           V G  SG   VGGG+     ++  +G     A   +  +    A  AL    ++      
Sbjct: 149 VGGAFSGFFSVGGGVVAAPALVGLFGMRQAAAQGLALALVTPGAVVALATYAHA------ 202

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 G V+  + + +    +L       L++ + ++ L   F++ +  T+ V 
Sbjct: 203 ------GHVDWVSGIPLSLGGMLTISWGVALAHRMPERRLRALFALCLIATAAVM 251



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            I +   + G  SG F VGGG+V  P L   F +                L ++ P +V+
Sbjct: 142 WIPLVGVVGGAFSGFFSVGGGVVAAPALVGLFGMRQAAAQGLA-------LALVTPGAVV 194

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +   +   G ++            +T      +   + +  L   FA+  +    +ML R
Sbjct: 195 ALATYAHAGHVDWVSGIPLSLGGMLTISWGVALAHRMPERRLRALFALCLIATAAVMLVR 254


>gi|18148885|dbj|BAB83475.1| unnamed protein product [Staphylococcus hominis]
          Length = 252

 Score = 80.5 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 109/259 (42%), Gaps = 15/259 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +++V   L G +SGL G+GG +V+          +    +   ++A G +   + 
Sbjct: 4   ITTIIVMLVIGILGGFISGLVGIGGAIVIY-PTLLLLPPLFGLPTYSAYIASGLTSSQVF 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +++   +   ++   +  ++ +    + I +++ +++ + ++  F+N  + I  LL  I
Sbjct: 63  FSTLSGSLNAYKNKNFSRTLILNMGSGMVIGSMLGAILANLINVQFVNTVYIIIALLALI 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
           LM  +          +  +    G + G +SG +G GG       L++ +   +      
Sbjct: 123 LMFIKVTPSTSHIKFNRLLLITIGGIIGLVSGIVGAGGAFIIIPVLLVIFKLPMNMVVTN 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +  A ++++              G++ I + + ++  SIL TPL  K+   I
Sbjct: 183 SIVIAFISSIGAFMIKLLQ------------GYIPINSAIPLILGSILFTPLGMKMGQKI 230

Query: 259 GKKYLTIGFSMIMFTTSFV 277
              Y+      I+   + +
Sbjct: 231 P-DYIQKTIICILIVVAII 248


>gi|225862757|ref|YP_002748135.1| hypothetical protein BCA_0844 [Bacillus cereus 03BB102]
 gi|225789478|gb|ACO29695.1| putative membrane protein [Bacillus cereus 03BB102]
          Length = 254

 Score = 80.5 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 102/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTAHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + +++  +N  +A    +  I
Sbjct: 60  FATFAGAWTYRKSNAMDKTLVVYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R   +    + ++  +   + G  SG +G GG      +ML      I +  AT
Sbjct: 120 MMFVPKRNNGDELKYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRRTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LII   SI   PL  +    I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVVMPALIIAIASIFAAPLGARFGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAVKM 247


>gi|313682521|ref|YP_004060259.1| hypothetical protein Sulku_1397 [Sulfuricurvum kujiense DSM 16994]
 gi|313155381|gb|ADR34059.1| protein of unknown function DUF81 [Sulfuricurvum kujiense DSM
           16994]
          Length = 245

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 92/250 (36%), Gaps = 21/250 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +     GTLSG FG+GGG V VP+L              +  A+G S+  +   S+++
Sbjct: 5   LALLGVGVGTLSGFFGIGGGTVSVPILLYL--------GFGIKEAIGISVTQMVAGSLLA 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H +  T  +  +K + +   +  +   +++  +  S L   F          +   +
Sbjct: 57  AWIHHKKQTYAIGDIKYFGYGGILGAIAGGILVKALHSSILEWLFLSIVAFTLGRLALSN 116

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSA 204
                 +  +  +    G V G  SG LGVGG I    +++ F G  + KA+A       
Sbjct: 117 PEPTRPEVVNRPLYTFVGSVIGVFSGMLGVGGSILMTPVLVSFMGFPLKKASAVGHFFVT 176

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
             +  AL   ++            LG VN+ A L +   S+        L + +   +  
Sbjct: 177 FSSVSALATLLW------------LGLVNLEAGLTMALSSLFGIMAGIALLHRVKVTHYK 224

Query: 265 IGFSMIMFTT 274
               +     
Sbjct: 225 QVLVIFYIII 234


>gi|298693356|gb|ADI96578.1| hypothetical protein SAOV_0036 [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 251

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 111/243 (45%), Gaps = 15/243 (6%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +V+ + ++++     G +SGL GVGG +++ P +     L G   +   ++A G +   
Sbjct: 2   DIVNIVIMLLI-GVFGGFISGLVGVGGAIIIYPAILLLPPLFG-APAYSAYIASGLTSSQ 59

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +  +++   ++ R+    + +++      + I +++ + + +  D +F+N  + I  LL 
Sbjct: 60  VFFSTLSGSLKARKKTEFSPQLVLYMGGGMIIGSMLGAFLANLFDATFVNTVYIIIALLA 119

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
             LM  + +   E+   + Y+  I G+  G +SG +G GG       L++ +   +    
Sbjct: 120 LTLMFIKVKPSSEKSSFNKYLLVIIGLFIGIISGIIGAGGAFIIIPILLVLFKLPMNTVV 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A S  ++ + +  A ++++              G++ +   L ++  SI+  P+  KLS 
Sbjct: 180 ANSIVIAFISSIGAFVIKLIQ------------GYIPLYDALFLIIGSIIFAPIGLKLSK 227

Query: 257 MIG 259
            + 
Sbjct: 228 KVP 230


>gi|146303869|ref|YP_001191185.1| hypothetical protein Msed_1097 [Metallosphaera sedula DSM 5348]
 gi|145702119|gb|ABP95261.1| protein of unknown function DUF81 [Metallosphaera sedula DSM 5348]
          Length = 262

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 86/216 (39%), Gaps = 15/216 (6%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           ++        +D I ++++     G L+G+ G  G L++VP LS           +    
Sbjct: 2   ILTVWFGKSHMDSIIILLLVGIAVGALTGITGSSGVLIVVPALSYL--------GLSFVD 53

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           ++G+SL V   T++     + RHG +++K          +   + S +        L  A
Sbjct: 54  SVGSSLWVDIITTLSVIFVYFRHGNVDLKTSLIMGVGAVLGAQLGSRLAFITPDKLLEGA 113

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKY------IWGMVTGFLSGALGVGGGIFTN- 182
           F +F  +M  +  +R R    +    N   +      I  +V G ++G LG  GGI    
Sbjct: 114 FTVFTTVMAYVSFRRSRNPSLKIRTRNLGTWSYVLAPILSVVIGIVTGTLGASGGIMFIA 173

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           ++M+ +   + +   T+     L A    +    +G
Sbjct: 174 VMMMLFSMDVRRMIGTATLAMLLSAVSGGVSYAIAG 209


>gi|114778333|ref|ZP_01453192.1| hypothetical protein SPV1_13372 [Mariprofundus ferrooxydans PV-1]
 gi|114551435|gb|EAU53991.1| hypothetical protein SPV1_13372 [Mariprofundus ferrooxydans PV-1]
          Length = 272

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 80/227 (35%), Gaps = 12/227 (5%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP+        G      M + +  SL  I  T   S   H R G ++ ++L   +  
Sbjct: 38  IYVPLFYACLPAEGGG----MALYIFASLAAIVMTGFFSARAHWRLGHVDKRMLISLLPG 93

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           L I   +       + +  +  A A     +     ++     +          +     
Sbjct: 94  LMIGAGLGLWSTLRLPEEAILLALAALDGWVARDYGRQIPAGPQH----GPSPALISGPI 149

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G++SGALG+GGG     L+  + A +  A  TSA    ++A  A+L  +        L  
Sbjct: 150 GYISGALGIGGGTMLVPLLRRH-APLRFAVGTSAACGFVMAATAVLTNLLVESDWQALLS 208

Query: 227 ---WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
               SL  V +G  L++   S     L   +     +  L   F ++
Sbjct: 209 KHGSSLAGVWLGIALVLPFCSGWSARLHADMGEESLRILLKSVFILL 255


>gi|332797239|ref|YP_004458739.1| sulfite exporter TauE/SafE [Acidianus hospitalis W1]
 gi|332694974|gb|AEE94441.1| sulphite exporter TauE/SafE [Acidianus hospitalis W1]
          Length = 251

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 55/260 (21%), Positives = 95/260 (36%), Gaps = 27/260 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L+I+     G L+G+ G  G L++VP LS           +    A+G+SL V   T+
Sbjct: 4   IWLLIIIGIAVGALTGITGSSGVLIVVPALSYL--------GLSFQDAIGSSLLVDVITT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +     + RHG +++KI         +   V S +   V    L   F +F   M  +  
Sbjct: 56  LSVIFVYFRHGNVDLKISLILGLGAVMGAQVGSAIAFVVPDRALESVFVVFTAYMAYVSF 115

Query: 143 KRDR------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           KR R           +     +      + G ++G LG  GGI    ++ML +   + + 
Sbjct: 116 KRSRNPKLNIKRLNLRTASYVIAPTLAFLIGTVTGTLGASGGIMFIAVMMLLFSIDVKRM 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T+       A         SG               I A +II   +++      +L+
Sbjct: 176 IGTATLAMLFSAISGATAYAISGRSD------------IIASVIIGLTALVSGYYFARLA 223

Query: 256 YMIGKKYLTIGFSMIMFTTS 275
             +   Y+ +    +   TS
Sbjct: 224 NKMRPSYIYMFLGSVFVVTS 243


>gi|238653870|emb|CAV30812.1| magnetosome protein MamO [magnetite-containing magnetic vibrio]
          Length = 707

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 54/294 (18%), Positives = 97/294 (32%), Gaps = 56/294 (19%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++ + + G  SG+  +GGG++ V  +   F   G    +   VA  T+L         +
Sbjct: 425 LMLLAVVVGVTSGMVTMGGGVLQVAGMMIVF---GYGMHLIRPVAYLTNL----FIFGAA 477

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV---DKSFLNKAFAIFCLLMGILML 142
              + +HG I    +K       +  V    + + +       L   FA    L G+  L
Sbjct: 478 ARRNAKHGLIMWDTVKSVTPWACVGVVGGYFIGNELGDRSIGMLLGVFAALMTLKGLQEL 537

Query: 143 KRDR---------------------------------LYCERKFPDNYVKYIWGMVTGFL 169
                                                        +   K   G+  G +
Sbjct: 538 LNKNQEEVILRTDGGEVITAESEDGIEDMINLDEDSPAPSHEVMIEQASKAFLGLPPGLI 597

Query: 170 SGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG +G+ GG+ +  +   + GAS++ A A SA +    +    +V    G          
Sbjct: 598 SGIMGISGGVVSVPMQRMFVGASLHNAIANSAVIVFWASLTGAIVAFAHGVPA------- 650

Query: 229 LGFVNIGAVLIILPISILITP----LATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            G +++ A L I  I I        L  KL  M+  + L   ++ IM   +   
Sbjct: 651 -GLIDVKAPLTISAIMIPGAYVGGFLGAKLMKMLPAQVLRGVYTAIMAAVAVKM 703



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 15/125 (12%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
                  G +SG+ G+ GG+V VP+               +H A+  S  ++   S+   
Sbjct: 588 AFLGLPPGLISGIMGISGGVVSVPMQRMFVGA-------SLHNAIANSAVIVFWASLTGA 640

Query: 87  MEHRRHG--------TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           +    HG           + I    I    +   + + ++  +    L   +      + 
Sbjct: 641 IVAFAHGVPAGLIDVKAPLTISAIMIPGAYVGGFLGAKLMKMLPAQVLRGVYTAIMAAVA 700

Query: 139 ILMLK 143
           + ML 
Sbjct: 701 VKMLF 705


>gi|194292877|ref|YP_002008784.1| hypothetical protein RALTA_B2155 [Cupriavidus taiwanensis LMG
           19424]
 gi|193226781|emb|CAQ72732.1| conserved hypothetical protein; putative membrane protein
           [Cupriavidus taiwanensis LMG 19424]
          Length = 254

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 92/229 (40%), Gaps = 17/229 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L +IAP  ++ F ++R+   I ++          + T ++
Sbjct: 34  AIPALGLLFGMDQQLAQGTALVMIAPNVLIGFWQYRKRADIALRTAVVLGLSAVLATWLS 93

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY----IWGMVTGFLS 170
           +   + +D   L + FA+F + M +  L R         P   V      + G+V G  S
Sbjct: 94  ARTATAMDAQLLRRIFALFMIGMALYFLWRLLPGRAVTAPQARVSARWIPMVGVVGGLFS 153

Query: 171 GALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G   VGGG+     ++  +G     A   +  +    A  AL    ++G           
Sbjct: 154 GFFSVGGGVVAAPALVGLFGLRQAAAQGLALALVTPGAVVALATYAHAGQ---------- 203

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             V+  + + +    +L       L++ + ++ L   F++ +  T+ V 
Sbjct: 204 --VDWASGIPLSLGGMLTISWGVALAHRMPERRLRALFAVCLIATAVVM 250



 Score = 46.2 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            I +   + G  SG F VGGG+V  P L   F L                L ++ P +V+
Sbjct: 141 WIPMVGVVGGLFSGFFSVGGGVVAAPALVGLFGLRQAAAQGLA-------LALVTPGAVV 193

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +   +   G ++            +T      +   + +  L   FA+  +   ++ML R
Sbjct: 194 ALATYAHAGQVDWASGIPLSLGGMLTISWGVALAHRMPERRLRALFAVCLIATAVVMLVR 253


>gi|303241999|ref|ZP_07328491.1| protein of unknown function DUF81 [Acetivibrio cellulolyticus CD2]
 gi|302590417|gb|EFL60173.1| protein of unknown function DUF81 [Acetivibrio cellulolyticus CD2]
          Length = 271

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 100/281 (35%), Gaps = 39/281 (13%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++    ++   F+ GT   L G GGG ++  V                 +    SL V+ 
Sbjct: 1   MEQFLWLLPLGFMVGTFGTLIGAGGGFIL--VPVLLLLYPDKSPETITSI----SLAVVF 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++   + + +   I+ K    +       +++ +   S + ++  N  F I  +   +
Sbjct: 55  FNALSGSLAYAKMKRIDFKSGLIFAISTIPGSILGAYTTSLIPRNVFNCVFGILLIAASV 114

Query: 140 LMLKRDRLY--CERKFPDNYVK--------------------YIWGMVTGFLSGALGVGG 177
            ++ + +     E + P N++                      I  +  G++S  LG+GG
Sbjct: 115 FLMIKPKNTKAAEGEVPKNHIIRSITDIEGVNYVFSYNLLLGVIISIFVGYISSLLGIGG 174

Query: 178 GIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           GI    +++      ++ ATATS  V A+++    +V I SG    G          I  
Sbjct: 175 GIIHVPVLVHALNFPVHIATATSHFVLAVMSLSGTIVHIASGVLSKG----------ILQ 224

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + +    +    L  +LS      ++    ++ +      
Sbjct: 225 TVALSSGVLFGAQLGARLSNRFNGIWIIRSLAIALGLVGIR 265



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 9/122 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L ++ S   G +S L G+GGG++ VPVL  A           +H+A  TS  V+A  S
Sbjct: 153 LLLGVIISIFVGYISSLLGIGGGIIHVPVLVHALNF-------PVHIATATSHFVLAVMS 205

Query: 83  VMSFMEHRRHGTINMKILKDWIF--VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +   + H   G ++  IL+       +     + + + +  +  ++ ++ AI   L+GI 
Sbjct: 206 LSGTIVHIASGVLSKGILQTVALSSGVLFGAQLGARLSNRFNGIWIIRSLAIALGLVGIR 265

Query: 141 ML 142
           +L
Sbjct: 266 IL 267


>gi|81300222|ref|YP_400430.1| hypothetical protein Synpcc7942_1413 [Synechococcus elongatus PCC
           7942]
 gi|81169103|gb|ABB57443.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 251

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 79/239 (33%), Gaps = 28/239 (11%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVPVL      +G+        A GTS   I  TS+    ++ R G +    +       
Sbjct: 26  MVPVLI----GLGVSPVQ----AFGTSNLAILITSISGTWQNWRSGNLQAASIWQLGLPA 77

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIF----CLLMGILMLKRDRLYCERKFPDNYVK---Y 160
             T  +   +   +  + L    A        L+ +          ++  P         
Sbjct: 78  IATAQLGVFLAQRLPGNVLLLGIAGLYFLNIFLVELRQWLNRNASPDKDKPTQPSLMSVL 137

Query: 161 IWGMVTGFLSGALGVGGGIFTNLL-MLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           I G + G L+G  G+GGG     L +L  G  I  A  TS GV  + A  AL     +  
Sbjct: 138 ITGALGGVLAGLFGIGGGTLMVPLQVLLMGVPIKTAVQTSLGVIIVTACSALSGYAVA-- 195

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                     G V       +    +L   + T+L   +    +   F +++ +    F
Sbjct: 196 ----------GDVLWVQGFWLGLGGLLGVQVTTRLLPKLPAVLVQRCFQLLLLSFGIYF 244



 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 7/121 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++   L G L+GLFG+GGG +MVP+             + +  A+ TSLGVI  T+  +
Sbjct: 136 VLITGALGGVLAGLFGIGGGTLMVPLQVLLM-------GVPIKTAVQTSLGVIIVTACSA 188

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +   G +             +   VT+ ++  +    + + F +  L  GI  + + 
Sbjct: 189 LSGYAVAGDVLWVQGFWLGLGGLLGVQVTTRLLPKLPAVLVQRCFQLLLLSFGIYFIWKA 248

Query: 146 R 146
           +
Sbjct: 249 Q 249


>gi|312892141|ref|ZP_07751639.1| protein of unknown function DUF81 [Mucilaginibacter paludis DSM
           18603]
 gi|311295392|gb|EFQ72563.1| protein of unknown function DUF81 [Mucilaginibacter paludis DSM
           18603]
          Length = 277

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/286 (17%), Positives = 110/286 (38%), Gaps = 44/286 (15%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            V+    +I++ ++ +G +  L G+GGG+V++P+L+           + +H A+G SL  
Sbjct: 2   SVLLLTTIILIGAYAAGLVGSLTGLGGGVVIIPLLTVLLH-------VDIHYAIGASLVS 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +  TS  S   + + G  NM++            +  +++  ++   ++   F +  +  
Sbjct: 55  VIATSSGSASAYVKEGITNMRLGMFLEIATTSGAIAGAIVAKYLPVQYIAILFGLVLIFS 114

Query: 138 GILMLKR-------------DRLYCERKFPDNYVKYIWGM-----------VTGFLSGAL 173
            ++ L++              +L     +P       +G+             G +SG L
Sbjct: 115 ALMSLRKKVEHVDEYKSPLAKKLKLNSTYPSGTEVVAYGVRNVGGGFFMMIFAGMMSGLL 174

Query: 174 GVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G G    + M    G     +T TS  +  + A  + +V +  G+   GL        
Sbjct: 175 GIGSGALKVVAMDGIMGIPFKVSTTTSNFMIGVTAAASAVVYLQRGYIEPGL-------- 226

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                + ++   +L     +K+      + L   F++I+   +   
Sbjct: 227 ----AMPVVVGVLLGAFTGSKILVHSQSQKLRYFFAVIVTFLAVQM 268



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
             +G +SGL G+G G + V  +            I   V+  TS  +I  T+  S + + 
Sbjct: 165 IFAGMMSGLLGIGSGALKVVAMDGIM-------GIPFKVSTTTSNFMIGVTAAASAVVYL 217

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + G I   +    +  + +     S ++ H     L   FA+    + + M+ +
Sbjct: 218 QRGYIEPGLAMPVVVGVLLGAFTGSKILVHSQSQKLRYFFAVIVTFLAVQMIYK 271


>gi|85860407|ref|YP_462609.1| permease [Syntrophus aciditrophicus SB]
 gi|85723498|gb|ABC78441.1| permease [Syntrophus aciditrophicus SB]
          Length = 189

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 8/116 (6%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-TSVMSFME 88
            F++G  +GLFG+GGG+++VP L              +H A+GTSL ++ P   + + + 
Sbjct: 73  GFIAGIAAGLFGIGGGVLIVPALVYL-------AGFPLHTAVGTSLAILLPPVGLAAVLT 125

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + R+G +N+K        L + + + +++ +H+    L  AF IF   +GI ++  
Sbjct: 126 YYRYGQVNLKAALIVAAALFLGSWLGAILANHLSGPHLKLAFGIFVAGLGIYLIIG 181



 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 14/118 (11%)

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSA-LIAFPALLVRIYSGW 219
            G + G  +G  G+GGG+     +++  G  ++ A  TS  +    +   A+L       
Sbjct: 72  IGFIAGIAAGLFGIGGGVLIVPALVYLAGFPLHTAVGTSLAILLPPVGLAAVLTY----- 126

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                  +  G VN+ A LI+     L + L   L+  +   +L + F + +      
Sbjct: 127 -------YRYGQVNLKAALIVAAALFLGSWLGAILANHLSGPHLKLAFGIFVAGLGIY 177


>gi|21225763|ref|NP_631542.1| integral membrane protein [Streptomyces coelicolor A3(2)]
 gi|15021231|emb|CAC44674.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
          Length = 283

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 80/211 (37%), Gaps = 9/211 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++    L+G  + LFG GGG V VPV+      +G D    + VA  TS  V+   +
Sbjct: 21  VVALLGIGLLTGVTTVLFGFGGGFVAVPVVVWTDSALGAD---AIRVATATSALVMVVNA 77

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +     R     ++     + +L +     +L   H     +  AF  +  L  + +L
Sbjct: 78  AFATAVTPRRVLAALRGGGPLLVLLGVGAAAGALAARHAPAGLIRWAFVAYVALTVVDLL 137

Query: 143 KRDR------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
            R                   +    G   G ++  LGVGG + T   M   G +++ AT
Sbjct: 138 LRPGFLRPRAPAEAAPGTPRPLPAAVGAPVGAVAAFLGVGGSVMTVPAMRRAGHTMHVAT 197

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           A +  ++  IA PA  V +       G  P 
Sbjct: 198 ALANPLTLAIALPAAAVFLGGSGDPAGAHPH 228


>gi|301052423|ref|YP_003790634.1| hypothetical protein BACI_c08110 [Bacillus anthracis CI]
 gi|300374592|gb|ADK03496.1| probable membrane protein [Bacillus cereus biovar anthracis str.
           CI]
          Length = 254

 Score = 80.1 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 101/260 (38%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAVINYPMILYIPVLLGFT-GYTAHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + + +  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKTLVVYMGASILIGSFIGSFGANALAEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R   +    + ++  +   + G  SG +G GG      +ML      I    AT
Sbjct: 120 MMFVPKRNNGDEVKYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRTTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVVMPALIIAIASIFAAPLGARVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAVKM 247


>gi|220910985|ref|YP_002486294.1| hypothetical protein Achl_0204 [Arthrobacter chlorophenolicus A6]
 gi|219857863|gb|ACL38205.1| protein of unknown function DUF81 [Arthrobacter chlorophenolicus
           A6]
          Length = 303

 Score = 79.7 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 80/234 (34%), Gaps = 26/234 (11%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L                 A+  SL V+  TS +S + H R G +  +    +     
Sbjct: 31  VPILVYV-------AGFEAKEAIAASLFVVGVTSAVSVISHARGGRVMWRTGLIFGAAGM 83

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY-------CERKFPDNYVKYI 161
               V  L+  H+    L  AFA+  +   + ML+  +          + + P   V   
Sbjct: 84  AGAFVGGLLGGHIPGQILLIAFAVMMVATSVAMLRGRKKKNDGAAEPVKHELPLGRVLLD 143

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
             +V          GG +    L L  G  +  A  TS  V A+ +F  L   + +    
Sbjct: 144 GVVVGLVTGLVGAGGGFLVVPALALLGGLPMSVAVGTSLVVIAMKSFAGLAGYLTTVQ-- 201

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                     ++ G  L +   +I+ + + +KL+  I +  L   F   +    
Sbjct: 202 ----------LDWGITLGVTAAAIVGSLIGSKLAGKIPEAALRKSFGWFVLAMG 245



 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 7/107 (6%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
            GGG ++VP L+           + M VA+GTSL VIA  S      +     ++  I  
Sbjct: 156 AGGGFLVVPALALL-------GGLPMSVAVGTSLVVIAMKSFAGLAGYLTTVQLDWGITL 208

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
                  + +++ S +   + ++ L K+F  F L MG  +L +    
Sbjct: 209 GVTAAAIVGSLIGSKLAGKIPEAALRKSFGWFVLAMGTFVLIQQAPP 255


>gi|7592615|dbj|BAA94322.1| hypothetical protein [Staphylococcus aureus]
          Length = 252

 Score = 79.7 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 107/255 (41%), Gaps = 14/255 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +++V   L G +SGL G+GG +V+          +    +   ++A G +   + 
Sbjct: 4   ITVIIVMLVIGILGGFISGLVGIGGAIVIY-PALLLLPPLFGLPTYSAYIASGLTSSQVF 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +++   ++  ++   +  ++ +    + I +++ +L+ +  +  F+N  + I  LL  I
Sbjct: 63  FSTLSGSLKAYKNKNFSRTLILNMGSGMVIGSILGALLATVFNSQFVNVIYIIIALLALI 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
           LM  +          +  +    G + G +SG +G GG       L++ +   +      
Sbjct: 123 LMFIKVTPSTSHIKFNRVLLITIGGIIGLVSGIVGAGGAFIIIPVLLVIFKLPMNMVVTN 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +  A ++++              G++ I + + ++  SIL TPL  K+   I
Sbjct: 183 SIVIAFISSIGAFIIKLLQ------------GYIPINSAIPLILGSILFTPLGMKIGQKI 230

Query: 259 GKKYLTIGFSMIMFT 273
                    S+++  
Sbjct: 231 PDSIQKGIVSILIVI 245


>gi|260431503|ref|ZP_05785474.1| putative membrane protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415331|gb|EEX08590.1| putative membrane protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 306

 Score = 79.7 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 50/291 (17%), Positives = 102/291 (35%), Gaps = 55/291 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    V     L++    + G LSG+FGVGGG +M P+L       GI  +    V
Sbjct: 1   MHIYLPIAEVSVNAFLLLGLGGMVGILSGMFGVGGGFLMTPLLFFI----GIPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    I  +S    + H R  T+++K+    +    +   +  ++ +++        
Sbjct: 53  AVATEANQIVASSFSGVLAHFRRKTVDLKMGCVLLVGGLLGAALGVVVFNYLKSLGQVDL 112

Query: 125 FLNKAFAIFCLLMGILML------------------------------KRDRLYCERKFP 154
            +   + +F  ++G LM                                + R      + 
Sbjct: 113 LVKLCYVVFLGVVGGLMFVESLNALRKSRKGGGQVAKRRQRGWIHALPFKMRFRTSGLYI 172

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLV 213
                 + G+  G LS  +GVGGG      M++  G        TS      +     ++
Sbjct: 173 SVIPPVLVGLCVGVLSAIMGVGGGFIMVPAMIYLLGMPTKVVVGTSLFQIIFVTAFTTML 232

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
              + +            V+I   +++L   ++   + T +   +  + L 
Sbjct: 233 HATTNYT-----------VDIVLAVLLLVGGVIGAQVGTVIGSRMPAEQLR 272


>gi|242243162|ref|ZP_04797607.1| hypothetical membrane protein [Staphylococcus epidermidis W23144]
 gi|242233414|gb|EES35726.1| hypothetical membrane protein [Staphylococcus epidermidis W23144]
          Length = 252

 Score = 79.7 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 109/256 (42%), Gaps = 14/256 (5%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +V  + ++++     G +SGL G+GG +++   +      +    +   ++A G +   +
Sbjct: 3   MVTSMIIMLLIGIFGGFISGLVGIGGAIIIY-PMLLLLPPLVGLPTYSAYIASGLTSSQV 61

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             +++    +  ++   +  ++ +    + I +++ +++ + ++  F+N  + I  LL  
Sbjct: 62  FFSTLSGSFKAYKNKDFSRTLVLNMGSGMIIGSILGAILANLINVQFVNMVYIIIALLAL 121

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           ILM  +          +  +    G + G +SG +G GG       L++ +   +     
Sbjct: 122 ILMFIKVAPSTSHIKFNRLLLITIGGIIGLVSGIVGAGGAFIIIPVLLVIFKLPMNTVVT 181

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            S  ++ + +  A ++++              G++ + + + ++  SIL TPL  K+   
Sbjct: 182 NSIVIAFISSVGAFIIKLLQ------------GYIPVNSAIPLILGSILFTPLGMKIGQK 229

Query: 258 IGKKYLTIGFSMIMFT 273
           I      +  S+++  
Sbjct: 230 IPDYIQKMIVSILIVI 245


>gi|223985850|ref|ZP_03635890.1| hypothetical protein HOLDEFILI_03196 [Holdemania filiformis DSM
           12042]
 gi|223962181|gb|EEF66653.1| hypothetical protein HOLDEFILI_03196 [Holdemania filiformis DSM
           12042]
          Length = 257

 Score = 79.7 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 95/263 (36%), Gaps = 25/263 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + + ++A   +G  +GL G+    V+ P+L         +       A+G SL    
Sbjct: 3   LTILIVTMIAGLGAGIATGLAGLSAAAVITPMLVTLLGFNAYE-------AVGISLASDV 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S +S   + +H  ++++     +    I T+V S + S V ++ L        +++GI
Sbjct: 56  LASAVSAFTYYKHKNLDIRNGLIMMISTVIFTMVGSWLGSLVPQTTLGSFSVWITMILGI 115

Query: 140 L------MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASI 192
                  M    +           +    G++ G + G +G GGG+   L+++   G  +
Sbjct: 116 RFIVKPVMSASSKNQTRTAKQKALLSLACGVLIGLICGFIGAGGGMMMLLVLVSVLGYDL 175

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A  TS  +    A    L                 G +    ++  +  + L   +A 
Sbjct: 176 KTAVGTSVFIMTFTALTGALSHFAIS-----------GTIQWFPLISSVFFTYLGAMIAA 224

Query: 253 KLSYMIGKKYLTIGFSMIMFTTS 275
           + +     K L     +++F   
Sbjct: 225 RFANKAEPKKLNQVTGVVLFILG 247



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 8/120 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +    L G + G  G GGG++M+ VL              +  A+GTS+ ++  T++
Sbjct: 139 LLSLACGVLIGLICGFIGAGGGMMMLLVLVSVL-------GYDLKTAVGTSVFIMTFTAL 191

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              + H    GTI    L   +F   +  ++ +   +  +   LN+   +   ++G+ ML
Sbjct: 192 TGALSHFAISGTIQWFPLISSVFFTYLGAMIAARFANKAEPKKLNQVTGVVLFILGVFML 251


>gi|226362126|ref|YP_002779904.1| hypothetical protein ROP_27120 [Rhodococcus opacus B4]
 gi|226240611|dbj|BAH50959.1| hypothetical membrane protein [Rhodococcus opacus B4]
          Length = 267

 Score = 79.7 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 85/202 (42%), Gaps = 9/202 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++++   ++G  + LFG GGG V VPV+  A   +G        VA+ TS  V+   +
Sbjct: 3   LFVLLLIGLVTGVTTVLFGFGGGFVTVPVILWAEAGLG---DTAAQVAVATSAAVMLINA 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++     R     ++  +    +L +  +  +L+   V  + +   F I+ +   + +L
Sbjct: 60  AVATAATPRTVLRRLQRSRGLPLLLGLGGIAGALLARDVPGAVIQWGFVIYLVATIVDVL 119

Query: 143 KRDRLYCERKFPDN------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
            R      +  P         +    G+  G  +  LGVGG + T  L    G  +  AT
Sbjct: 120 LRPGFVRPKAPPTTHPQQQFAIPTPLGLPIGATAAFLGVGGSVMTVPLPRRAGEGMGVAT 179

Query: 197 ATSAGVSALIAFPALLVRIYSG 218
             +  ++  I+ PA L  + +G
Sbjct: 180 TLANPLTLAISLPAALTFLAAG 201


>gi|42780649|ref|NP_977896.1| hypothetical protein BCE_1575 [Bacillus cereus ATCC 10987]
 gi|206978393|ref|ZP_03239264.1| putative membrane protein [Bacillus cereus H3081.97]
 gi|42736569|gb|AAS40504.1| membrane protein, putative [Bacillus cereus ATCC 10987]
 gi|206743398|gb|EDZ54834.1| putative membrane protein [Bacillus cereus H3081.97]
 gi|324325567|gb|ADY20827.1| hypothetical protein YBT020_07905 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 266

 Score = 79.7 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 56/275 (20%), Positives = 111/275 (40%), Gaps = 40/275 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T +
Sbjct: 4   IMLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGL 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ 
Sbjct: 57  SSTLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLML 116

Query: 144 RDRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL 183
           RD+L           +R F DN    +              + GF+SG  G+GGG     
Sbjct: 117 RDKLKPLSLSNMTVIKRSFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGIGGGALLVP 176

Query: 184 -LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            +ML +    + A ATS  +  L A  +    I            SLG V+    LI++P
Sbjct: 177 AMMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWIYALILIP 224

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + +   +   ++  +    +     + +      
Sbjct: 225 GAWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 259


>gi|52142448|ref|YP_084379.1| hypothetical protein BCZK2791 [Bacillus cereus E33L]
 gi|51975917|gb|AAU17467.1| conserved hypothetical protein [Bacillus cereus E33L]
          Length = 399

 Score = 79.7 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 92/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A  
Sbjct: 93  TITGGFFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE- 150

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   V +  +S++    +    ++
Sbjct: 151 ------VVTTAASGASHLKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISL 204

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R     ++    K          G+  GF+    G G G  T  ++L  
Sbjct: 205 FLFTLGVYILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLAR 264

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       ++  A +    S GW            V+   V  ++   I+ 
Sbjct: 265 GNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALMLGGIVA 314

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  ++    L +    ++  T+  
Sbjct: 315 APIAAWLVRIVPSHLLGVLVGGLIIFTNIR 344


>gi|302562974|dbj|BAJ14602.1| hypothetical protein [Staphylococcus fleurettii]
          Length = 251

 Score = 79.7 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 88/211 (41%), Gaps = 14/211 (6%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P +     L+GI  +   ++A G +   +  +++   +  R+    + K++      + I
Sbjct: 33  PAILILPPLIGI-PAYSAYIASGLTSSQVFFSTLSGSLNARKQPAFSPKLVIYMGGGMLI 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            +++ +++ S  + +F+N  + I  +L  ILM  + +   +       +  I G   G +
Sbjct: 92  GSMLGAILASLFNATFVNTVYVIIAILALILMFIKVKPTTQETKSKPLLLIIVGFGIGVI 151

Query: 170 SGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG +G GG      ++L  +   +      S  ++ + +  A  +++             
Sbjct: 152 SGIVGAGGAFIIIPVLLALFKLPMNTVVNNSIAIAFISSVGAFFIKLMQ----------- 200

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIG 259
            G++ + + + ++  SI+  P+  K+   + 
Sbjct: 201 -GYIPVESAIFLIIGSIIFAPIGLKVGKKVP 230


>gi|116624708|ref|YP_826864.1| hypothetical protein Acid_5632 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227870|gb|ABJ86579.1| protein of unknown function DUF81 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 281

 Score = 79.7 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 102/284 (35%), Gaps = 45/284 (15%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++  L+ + S ++G +  L G+GGG ++VP+L+  F        + +  A+G SL  +  
Sbjct: 7   EFSALLGLGSLVTGIIGALTGLGGGFIVVPLLTLCF-------GVDIRYAIGASLICVIA 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS  +   + R G  N+++            V+ + +   V    +     +  L   +L
Sbjct: 60  TSTGAAARYVRGGYPNIRLGMFLELATTGGAVLGAFLAPKVPTPVIGALCGVVLLYASLL 119

Query: 141 MLKRDRLYCERKFPDNYVKYI-------------------------WGMVTGFLSGALGV 175
            L+R         PD    ++                            + G LSG LG+
Sbjct: 120 TLRRTSEQVSTAVPDRVAAWLDVDGEYPTSQGAVSYRVRHVPEGFGVMGLAGMLSGLLGI 179

Query: 176 GGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           G G+   + +    G     +  TS+ +  + A  +  V +  G+    L         +
Sbjct: 180 GSGLIKVVALDQVMGLPFKVSATTSSFMIGVTAAASAGVHLSRGYIDPALA--------M 231

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             +L +L        L  ++      + L + F+ ++   +   
Sbjct: 232 PVLLGVLAG----ATLGARILPGAPPRRLRLLFAGLLAAVAIEM 271



 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+G LSGL G+G GL+ V  L +          +   V+  TS  +I  T+  S   H  
Sbjct: 169 LAGMLSGLLGIGSGLIKVVALDQVM-------GLPFKVSATTSSFMIGVTAAASAGVHLS 221

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            G I+  +    +  +     + + ++       L   FA     + I ML 
Sbjct: 222 RGYIDPALAMPVLLGVLAGATLGARILPGAPPRRLRLLFAGLLAAVAIEMLY 273


>gi|198284012|ref|YP_002220333.1| hypothetical protein Lferr_1905 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|198248533|gb|ACH84126.1| protein of unknown function DUF81 [Acidithiobacillus ferrooxidans
           ATCC 53993]
          Length = 305

 Score = 79.7 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 57/306 (18%), Positives = 105/306 (34%), Gaps = 56/306 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + +FL    +   I LII    + G LSGL GVGGG ++ P+L            +   V
Sbjct: 1   MELFLPVAHMAVNIWLIIGFGLIVGFLSGLTGVGGGFLITPLLIFV--------GVPPLV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS----- 124
           A+GT    I   S +    H R G ++M++    +    +  ++   +   +D S     
Sbjct: 53  AVGTGAAQIVGASAVGSYAHWRMGNVDMRMAFILLAGSWMGGLLGVHVARILDASGYFGL 112

Query: 125 FLNKAFAIFCLLMGILML-------------KRDRLYCERKFP----------------- 154
            +   +      +GI ML              +++       P                 
Sbjct: 113 VVTFLYVGLLGFIGISMLVESTLAMRWGHHPGKNKKKARAGIPWLDRLPWRMEFPVSGLR 172

Query: 155 -DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                  + G V G ++  +GVGGG     +ML+           TS       +  A +
Sbjct: 173 LSILAPVLLGFVVGIMAALMGVGGGFVMVPIMLYLLKMPTRVVVGTSLFQLLFTS--AEV 230

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             + +G      P           VL ++  SI  T    +L  ++  + L +  ++++ 
Sbjct: 231 GILQAGMNHAVDPYL---------VLALVLGSIFGTQFGARLGALMRGEQLRLVLALVVM 281

Query: 273 TTSFVF 278
             +   
Sbjct: 282 GVAIKM 287



 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 8/130 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   ++  F+ G ++ L GVGGG VMVP++    +       +   V +GTSL  +  TS
Sbjct: 175 ILAPVLLGFVVGIMAALMGVGGGFVMVPIMLYLLK-------MPTRVVVGTSLFQLLFTS 227

Query: 83  V-MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             +  ++   +  ++  ++   +      T   + + + +    L    A+  + + I M
Sbjct: 228 AEVGILQAGMNHAVDPYLVLALVLGSIFGTQFGARLGALMRGEQLRLVLALVVMGVAIKM 287

Query: 142 LKRDRLYCER 151
                +  E 
Sbjct: 288 GLGLVIPPEH 297


>gi|298674473|ref|YP_003726223.1| hypothetical protein Metev_0515 [Methanohalobium evestigatum
           Z-7303]
 gi|298287461|gb|ADI73427.1| protein of unknown function DUF81 [Methanohalobium evestigatum
           Z-7303]
          Length = 252

 Score = 79.7 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 96/259 (37%), Gaps = 23/259 (8%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI +  F    L  + G GG  + VP+L            I +H+ + T L +    +  
Sbjct: 5   LIAIIVFFLAILFSIIGTGGSTIYVPLLYWI--------GIDLHIVIPTVLLINTFATGS 56

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + + + +   ++ K     I        + +       +  L   FA+  LL+GI M+  
Sbjct: 57  ATIFYTKKKMVDFKTAIPLILTSVAGAPIGAYFSKSTPQDLLILIFAVLLLLIGIHMVFT 116

Query: 145 DRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
                  K      +       I G + G ++G LG+ GG+F   L+++ G +I  A+AT
Sbjct: 117 SSRIGHLKCTGRGTRKNVIISLISGFMIGIVAGLLGLSGGVFIVPLLVYLGYNIKTASAT 176

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  +    +    L  I  G     L    L + ++   L     S         + Y +
Sbjct: 177 SLFIIVFTSISGFLGHI--GTSTGSLDAGLLVYSSLAGFLGAQVGSYF-------MIYRL 227

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             K +   F ++++  +  
Sbjct: 228 KSKTINQMFGIVLWVVAIR 246



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 11/125 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +++ F+ G ++GL G+ GG+ +VP+L              +  A  TSL +I  TS
Sbjct: 134 VIISLISGFMIGIVAGLLGLSGGVFIVPLLVYL--------GYNIKTASATSLFIIVFTS 185

Query: 83  VMSFMEHR--RHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMGI 139
           +  F+ H     G+++  +L        +   V S  MI  +    +N+ F I   ++ I
Sbjct: 186 ISGFLGHIGTSTGSLDAGLLVYSSLAGFLGAQVGSYFMIYRLKSKTINQMFGIVLWVVAI 245

Query: 140 LMLKR 144
            ++  
Sbjct: 246 RLIIG 250


>gi|27467051|ref|NP_763688.1| hypothetical protein SE0133 [Staphylococcus epidermidis ATCC 12228]
 gi|57865843|ref|YP_189977.1| hypothetical protein SERP2432 [Staphylococcus epidermidis RP62A]
 gi|251811478|ref|ZP_04825951.1| hypothetical membrane protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|293367537|ref|ZP_06614192.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|27314593|gb|AAO03730.1|AE016744_133 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|57636501|gb|AAW53289.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
 gi|251804982|gb|EES57639.1| hypothetical membrane protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|291318365|gb|EFE58756.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 252

 Score = 79.7 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 109/256 (42%), Gaps = 14/256 (5%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +V  + ++++     G +SGL G+GG +++   +      +    +   ++A G +   +
Sbjct: 3   MVTSMIIMLLIGIFGGFISGLVGIGGAIIIY-PMLLLLPPLVGLPTYSAYIASGLTSSQV 61

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             +++    +  ++   +  ++ +    + I +++ +++ + ++  F+N  + I  LL  
Sbjct: 62  FFSTLSGSFKAYKNKDFSRTLVLNMGSGMIIGSILGAILANLINVQFVNMVYIIIALLAL 121

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           ILM  +          +  +    G + G +SG +G GG       L++ +   +     
Sbjct: 122 ILMFIKVAPSTSHIKFNRLLLITIGGIIGLVSGIVGAGGAFIIIPVLLVIFKLPMNTVVT 181

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            S  ++ + +  A ++++              G++ + + + ++  SIL TPL  K+   
Sbjct: 182 NSIVIAFISSIGAFIIKLLQ------------GYIPVNSAIPLILGSILFTPLGMKIGQK 229

Query: 258 IGKKYLTIGFSMIMFT 273
           I      +  S+++  
Sbjct: 230 IPDYIQKMIVSILIVI 245


>gi|47569119|ref|ZP_00239807.1| hypothetical protein membrane Spanning protein [Bacillus cereus
           G9241]
 gi|52143897|ref|YP_082932.1| hypothetical protein BCZK1333 [Bacillus cereus E33L]
 gi|228914123|ref|ZP_04077743.1| hypothetical protein bthur0012_13580 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228926580|ref|ZP_04089651.1| hypothetical protein bthur0010_12980 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228932833|ref|ZP_04095703.1| hypothetical protein bthur0009_13070 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228945147|ref|ZP_04107506.1| hypothetical protein bthur0007_13120 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228984629|ref|ZP_04144804.1| hypothetical protein bthur0001_13320 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|229090506|ref|ZP_04221744.1| hypothetical protein bcere0021_13320 [Bacillus cereus Rock3-42]
 gi|229121090|ref|ZP_04250330.1| hypothetical protein bcere0016_13970 [Bacillus cereus 95/8201]
 gi|229155119|ref|ZP_04283232.1| hypothetical protein bcere0010_13120 [Bacillus cereus ATCC 4342]
 gi|229183744|ref|ZP_04310963.1| hypothetical protein bcere0004_13130 [Bacillus cereus BGSC 6E1]
 gi|47554190|gb|EAL12553.1| hypothetical protein membrane Spanning protein [Bacillus cereus
           G9241]
 gi|51977366|gb|AAU18916.1| conserved hypothetical protein; possible membrane protein [Bacillus
           cereus E33L]
 gi|228599727|gb|EEK57328.1| hypothetical protein bcere0004_13130 [Bacillus cereus BGSC 6E1]
 gi|228628404|gb|EEK85118.1| hypothetical protein bcere0010_13120 [Bacillus cereus ATCC 4342]
 gi|228662419|gb|EEL18019.1| hypothetical protein bcere0016_13970 [Bacillus cereus 95/8201]
 gi|228692856|gb|EEL46577.1| hypothetical protein bcere0021_13320 [Bacillus cereus Rock3-42]
 gi|228775156|gb|EEM23547.1| hypothetical protein bthur0001_13320 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228814523|gb|EEM60785.1| hypothetical protein bthur0007_13120 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228826883|gb|EEM72647.1| hypothetical protein bthur0009_13070 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228833168|gb|EEM78734.1| hypothetical protein bthur0010_12980 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228845576|gb|EEM90607.1| hypothetical protein bthur0012_13580 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 262

 Score = 79.7 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 57/274 (20%), Positives = 112/274 (40%), Gaps = 40/274 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T + 
Sbjct: 1   MLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGLS 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ R
Sbjct: 54  STLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLMLR 113

Query: 145 DRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL- 183
           D+L           +R F DN    +              + GF+SG  G+GGG      
Sbjct: 114 DKLKPLSLSNMTVIKRSFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGIGGGALLVPA 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +    + A ATS  +  L A  +    I            SLG V+    LI++P 
Sbjct: 174 MMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWIYALILIPG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   +   ++  +  K +     + +      
Sbjct: 222 AWIGGKIGAYINTKLSGKAVINLLRITLIILGTR 255



 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  +++
Sbjct: 146 LLAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAI 198

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +S   H   G ++       I    I   + + + + +    +     I  +++G  ++
Sbjct: 199 VSSATHISLGNVSWIYALILIPGAWIGGKIGAYINTKLSGKAVINLLRITLIILGTRLI 257


>gi|47526743|ref|YP_018092.1| hypothetical protein GBAA_1470 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|47501891|gb|AAT30567.1| putative membrane protein [Bacillus anthracis str. 'Ames Ancestor']
          Length = 262

 Score = 79.7 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 57/274 (20%), Positives = 112/274 (40%), Gaps = 40/274 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T + 
Sbjct: 1   MLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGLS 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ R
Sbjct: 54  STLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLILR 113

Query: 145 DRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL- 183
           D+L           +R F DN    +              + GF+SG  G+GGG      
Sbjct: 114 DKLKPLSLSNMTVIKRSFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGIGGGALLVPA 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +    + A ATS  +  L A  +    I            SLG V+    LI++P 
Sbjct: 174 MMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWIYALILIPG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   +   ++  +  K +     + +      
Sbjct: 222 AWIGGKIGAYINTKLSGKAVINLLRITLIILGTR 255



 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  +++
Sbjct: 146 LLAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAI 198

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +S   H   G ++       I    I   + + + + +    +     I  +++G  ++
Sbjct: 199 VSSATHISLGNVSWIYALILIPGAWIGGKIGAYINTKLSGKAVINLLRITLIILGTRLI 257


>gi|251810296|ref|ZP_04824769.1| hypothetical membrane protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|251806178|gb|EES58835.1| hypothetical membrane protein [Staphylococcus epidermidis
           BCM-HMP0060]
          Length = 275

 Score = 79.7 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 75/190 (39%), Gaps = 21/190 (11%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L        +   I   +A+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTLVYLGVNHHLLHGITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            ++V S +  ++     N  F +F + + IL++ R ++   + F                
Sbjct: 92  GSLVGSFLSRYLTLDSFNLYFGVFMIFVSILLMIRHKIKPFKIFDKPKYARTYVDAEGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                     +I  +  G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YRYSVPPLFAFITTLFIGLLTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSG 218
            + +  I+ G
Sbjct: 212 MSSIGHIFQG 221


>gi|206895253|ref|YP_002246813.1| hypothetical protein COPRO5265_0449 [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206737870|gb|ACI16948.1| conserved hypothetical membrane protein [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 262

 Score = 79.7 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 54/272 (19%), Positives = 108/272 (39%), Gaps = 40/272 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            LI++   ++G ++GL G  G +V+VP L                 A+G SL      S+
Sbjct: 4   LLIVLVGLIAGVVTGLIGASGVMVIVPGLVML--------GYGAADAIGASLFADTVASL 55

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +    + + G +N++          +   V S +  H+ +S L  +F IF ++  ++   
Sbjct: 56  VVSWTYYQAGNVNLRQGWWIAVGSVLGAQVGSYISPHIAESSLGGSFGIFLIITAVIFAL 115

Query: 144 R---------DRLYCERKFPDNYVK----------YIWGMVTGFLSGALGVGGGIFTNLL 184
           R          +    ++ P+  +K           I G + G +SG LG GGG+   L+
Sbjct: 116 RGMGTVIGVNGQQVEAKREPNKLLKILRKNVVLSSLILGFLVGIISGLLGAGGGVMILLI 175

Query: 185 MLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           ++F    S+++   TS  + A  A    +   ++G     LP        + A ++    
Sbjct: 176 LVFVLEYSMHEGVGTSTFIMAFTAASGAIGHAFTG----NLP--------LEAAVLSGLG 223

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +++    A + +  + +K L+     I     
Sbjct: 224 TVIGGRFAARFANRVNEKVLSYIVGAIFGILG 255



 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 7/124 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +   ++  FL G +SGL G GGG++++ +L              MH  +GTS  ++A 
Sbjct: 145 NVVLSSLILGFLVGIISGLLGAGGGVMILLILVFVL-------EYSMHEGVGTSTFIMAF 197

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T+    + H   G + ++          I     +   + V++  L+        ++G+ 
Sbjct: 198 TAASGAIGHAFTGNLPLEAAVLSGLGTVIGGRFAARFANRVNEKVLSYIVGAIFGILGVA 257

Query: 141 MLKR 144
           ML  
Sbjct: 258 MLFG 261



 Score = 37.4 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 12/125 (9%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
              +  + G++ G ++G +G  G +     ++  G     A   S     + +       
Sbjct: 2   TQLLIVLVGLIAGVVTGLIGASGVMVIVPGLVMLGYGAADAIGASLFADTVASLVVSWTY 61

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                       +  G VN+     I   S+L   + + +S  I +  L   F + +  T
Sbjct: 62  ------------YQAGNVNLRQGWWIAVGSVLGAQVGSYISPHIAESSLGGSFGIFLIIT 109

Query: 275 SFVFA 279
           + +FA
Sbjct: 110 AVIFA 114


>gi|206968267|ref|ZP_03229223.1| putative membrane protein [Bacillus cereus AH1134]
 gi|218234248|ref|YP_002366233.1| hypothetical protein BCB4264_A1507 [Bacillus cereus B4264]
 gi|296502121|ref|YP_003663821.1| hypothetical protein BMB171_C1285 [Bacillus thuringiensis BMB171]
 gi|206737187|gb|EDZ54334.1| putative membrane protein [Bacillus cereus AH1134]
 gi|218162205|gb|ACK62197.1| putative membrane protein [Bacillus cereus B4264]
 gi|296323173|gb|ADH06101.1| hypothetical protein BMB171_C1285 [Bacillus thuringiensis BMB171]
 gi|326939171|gb|AEA15067.1| hypothetical protein CT43_CH1380 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 266

 Score = 79.7 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 56/275 (20%), Positives = 111/275 (40%), Gaps = 40/275 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T +
Sbjct: 4   IMLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGL 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ 
Sbjct: 57  SSTLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLML 116

Query: 144 RDRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL 183
           RD+L           +R F DN    +              + GF+SG  G+GGG     
Sbjct: 117 RDKLKPLSLSNTSVIKRSFTDNDGNTVHYQFPPFLAIFIAFIVGFISGLFGIGGGALLVP 176

Query: 184 -LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            +ML +    + A ATS  +  L A  +    I            SLG V+    LI++P
Sbjct: 177 AMMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWIYALILIP 224

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + +   +   ++  +    +     + +      
Sbjct: 225 GAWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 259


>gi|324324826|gb|ADY20086.1| hypothetical protein YBT020_04200 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 254

 Score = 79.7 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 100/260 (38%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTAHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + + +  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKTLVVYMGASILIGSFIGSFGANALAEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R   +    + ++  +     G  SG +G GG      +ML      I    AT
Sbjct: 120 MMFVPKRNNGDELKYNKWLASLLAFSVGGASGIIGAGGSFLLVPIMLVILNLPIRTTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVVMPALIIAIASIFAAPLGARVGKKI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAIKM 247


>gi|242373089|ref|ZP_04818663.1| hypothetical membrane Spanning protein [Staphylococcus epidermidis
           M23864:W1]
 gi|242349243|gb|EES40844.1| hypothetical membrane Spanning protein [Staphylococcus epidermidis
           M23864:W1]
          Length = 275

 Score = 79.7 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 74/190 (38%), Gaps = 21/190 (11%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L        +   I   +A+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTLVYLGVNHHLLHGITPQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            +++ S +  ++     N  F IF + + IL++ R ++   + F                
Sbjct: 92  GSLIGSFLSRYLTLDSFNLYFGIFMICVAILLMVRHKIKPFKIFDKPQYERTYVDVEGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                     ++  +  G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YHYSVPPLFAFVATLFIGVLTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSG 218
            + +  I  G
Sbjct: 212 MSSVGHIVQG 221



 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 7/122 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
               VA+   G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SV
Sbjct: 159 LFAFVATLFIGVLTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSV 211

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           MS + H   G +        I    I   +   +   +    +        LL+G  ++ 
Sbjct: 212 MSSVGHIVQGHVAWGYSIALIISSIIGAQIGVRVNRSIKSDTVVMLLRTVMLLIGAYLII 271

Query: 144 RD 145
           + 
Sbjct: 272 KS 273


>gi|149194015|ref|ZP_01871113.1| hypothetical protein CMTB2_02983 [Caminibacter mediatlanticus TB-2]
 gi|149135968|gb|EDM24446.1| hypothetical protein CMTB2_02983 [Caminibacter mediatlanticus TB-2]
          Length = 245

 Score = 79.7 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 83/233 (35%), Gaps = 21/233 (9%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT 94
             SG  GVGGG ++VP+L              +  A+G S+  +  +S+     + + G 
Sbjct: 13  FFSGFLGVGGGTILVPMLLFL--------GFPLKEAIGISVTQMMMSSIYGSFLNYKKGL 64

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
           + +K          +   ++ +++ +  K  L   F     +  I      +        
Sbjct: 65  LKIKNGLSLALGGALGASLSGIIVKYTPKEILGAIFLTLVAIAIIRFFITVKEPEYEPPI 124

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLV 213
           DN   +  G   G ++ ++GVGG I    +++ F    +    + S       +    + 
Sbjct: 125 DNKKLFFIGFFVGAIAISVGVGGAILITPILVGFLKYKLKTTVSLSLFFVVFSSVFGFIS 184

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           +  +G        ++ GF+       I   S++ T    KL + +  K     
Sbjct: 185 QSIAG-----HINYTEGFI-------IGFASLIGTYFGVKLYHKVDTKIHKKI 225



 Score = 39.7 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 7/119 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +    F  G ++   GVGG +++ P+L    +         +   +  SL  +  +SV  
Sbjct: 129 LFFIGFFVGAIAISVGVGGAILITPILVGFLKY-------KLKTTVSLSLFFVVFSSVFG 181

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           F+     G IN        F   I T     +   VD     K   I+ + +   M+ +
Sbjct: 182 FISQSIAGHINYTEGFIIGFASLIGTYFGVKLYHKVDTKIHKKILLIWYIFIFFAMIYK 240


>gi|163939366|ref|YP_001644250.1| hypothetical protein BcerKBAB4_1375 [Bacillus weihenstephanensis
           KBAB4]
 gi|163861563|gb|ABY42622.1| protein of unknown function DUF81 [Bacillus weihenstephanensis
           KBAB4]
          Length = 266

 Score = 79.3 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 57/275 (20%), Positives = 112/275 (40%), Gaps = 40/275 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T +
Sbjct: 4   IMLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGL 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ 
Sbjct: 57  ASTLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLIL 116

Query: 144 RDRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL 183
           RD+L           +R F DN    +              + GF+SG  G+GGG     
Sbjct: 117 RDKLKPLSLSNMTVIKRSFTDNEGNTVDYQFPPFLAIFIAFIVGFISGLFGIGGGALLVP 176

Query: 184 -LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            +ML +    + A ATS  +  L A  + L  I            SLG V+    LI++P
Sbjct: 177 AMMLLFAFPAHIAVATSMFIVFLSAIVSSLTHI------------SLGNVSWAYALILIP 224

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + +   +   ++  +    +     + +      
Sbjct: 225 GAWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 259


>gi|302563013|dbj|BAJ14639.1| hypothetical protein [Staphylococcus fleurettii]
          Length = 251

 Score = 79.3 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 88/211 (41%), Gaps = 14/211 (6%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P +     L+GI  +   ++A G +   +  +++   +  R+    + K++      + I
Sbjct: 33  PAILILPPLIGI-PAYSAYIASGLTSSQVFFSTLSGSLNARKQPAFSPKLVIYMGGGMLI 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            +++ +++ S  + +F+N  + I  +L  ILM  + +   +       +  I G   G +
Sbjct: 92  GSMLGAILASLFNATFVNTVYVIIAILALILMFIKVKPTTQETKSKPLLLIIVGFGIGVI 151

Query: 170 SGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG +G GG      ++L  +   +      S  ++ + +  A  +++             
Sbjct: 152 SGIVGAGGAFIIIPVLLALFKLPMNTVVNNSIAIAFISSVGAFFIKLMQ----------- 200

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIG 259
            G++ + + + ++  SI+  P+  K+   + 
Sbjct: 201 -GYIPVESAIFLIIGSIIFAPIGLKVGKKVP 230


>gi|56750151|ref|YP_170852.1| hypothetical protein syc0142_c [Synechococcus elongatus PCC 6301]
 gi|56685110|dbj|BAD78332.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 251

 Score = 79.3 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 78/239 (32%), Gaps = 28/239 (11%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVPVL      +G+        A GTS   I  TS+    ++ R G +    +       
Sbjct: 26  MVPVLI----GLGVSPVQ----AFGTSNLAILITSISGTWQNWRSGNLQAASIWQLGLPA 77

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIF----CLLMGILMLKRDRLYCERKFPDNYVK---Y 160
             T  +   +   +  + L    A        L+ +          ++  P         
Sbjct: 78  IATAQLGVFLAQRLPGNVLLLGIAGLYFLNIFLVELRQWLNRNASPDKDKPTQPSLMSVL 137

Query: 161 IWGMVTGFLSGALGVGGGIFTNLL-MLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           I G + G L+G  G+GGG     L +L     I  A  TS GV  + A  AL     +  
Sbjct: 138 ITGALGGVLAGLFGIGGGTLMVPLQVLLMRVPIKTAVQTSLGVIIVTACSALSGYAVA-- 195

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                     G V       +    +L   + T+L   +    +   F +++ +    F
Sbjct: 196 ----------GDVLWVQGFWLGLGGLLGVQVTTRLLPKLPAVLVQRCFQLLLLSFGIYF 244



 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 7/121 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++   L G L+GLFG+GGG +MVP+     +       + +  A+ TSLGVI  T+  +
Sbjct: 136 VLITGALGGVLAGLFGIGGGTLMVPLQVLLMR-------VPIKTAVQTSLGVIIVTACSA 188

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +   G +             +   VT+ ++  +    + + F +  L  GI  + + 
Sbjct: 189 LSGYAVAGDVLWVQGFWLGLGGLLGVQVTTRLLPKLPAVLVQRCFQLLLLSFGIYFIWKA 248

Query: 146 R 146
           +
Sbjct: 249 Q 249


>gi|229029228|ref|ZP_04185321.1| hypothetical protein bcere0028_13250 [Bacillus cereus AH1271]
 gi|228732136|gb|EEL83025.1| hypothetical protein bcere0028_13250 [Bacillus cereus AH1271]
          Length = 262

 Score = 79.3 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 57/274 (20%), Positives = 112/274 (40%), Gaps = 40/274 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T + 
Sbjct: 1   MLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGLS 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ R
Sbjct: 54  STLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLMLR 113

Query: 145 DRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL- 183
           D+L           +R F DN    +              + GF+SG  G+GGG      
Sbjct: 114 DKLNPLSLSNMTVIKRSFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGIGGGALLVPA 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +    + A ATS  +  L A  +    I            SLG V+    LI++P 
Sbjct: 174 MMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWIYALILIPG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   +   ++  +  K +     + +      
Sbjct: 222 AWIGGKIGAYINTKLSGKAVINLLRITLIILGTR 255



 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  +++
Sbjct: 146 LLAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAI 198

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +S   H   G ++       I    I   + + + + +    +     I  +++G  ++
Sbjct: 199 VSSATHISLGNVSWIYALILIPGAWIGGKIGAYINTKLSGKAVINLLRITLIILGTRLI 257


>gi|163734133|ref|ZP_02141574.1| integral membrane protein, putative [Roseobacter litoralis Och 149]
 gi|161392669|gb|EDQ16997.1| integral membrane protein, putative [Roseobacter litoralis Och 149]
          Length = 304

 Score = 79.3 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 98/277 (35%), Gaps = 53/277 (19%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG +M P+L       GI  +    VA+ T    I  +S    + H +  T++
Sbjct: 28  SGMFGVGGGFLMTPLLFFI----GIPPA----VAVATEANQIVASSFSGVLAHLKRKTVD 79

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFCLLMGILML--------- 142
           +K+    +    +   V  ++ +++         +   + +F  ++G LM          
Sbjct: 80  LKMGTVLLVGGLVGAAVGVVIFNYLKAQGQVDLLVKLCYVVFLGVIGGLMFIESLNAIRN 139

Query: 143 -------------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
                               + R      +       I G+  G L+  +GVGGG     
Sbjct: 140 TKKGKPPARKKHNWIHGLPFKMRFRVSGLYISVIPPLIVGVCVGILAAIMGVGGGFIMVP 199

Query: 184 LMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            M++  G        TS      +     L+   + +            V+I   +++L 
Sbjct: 200 AMIYLLGMPTKVVVGTSLFQIIFVTAFTTLLHATTNFT-----------VDIVLAVLLLV 248

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             ++   + T++   +  + L I  ++++       A
Sbjct: 249 GGVIGAQVGTRIGVKLKAEQLRILLAIMVLVVCGKLA 285



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 8/112 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G L+ + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 176 LIVGVCVGILAAIMGVGGGFIMVPAMIYLL-------GMPTKVVVGTSLFQIIFVTAFTT 228

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           + H     T+++ +    +    I   V + +   +    L    AI  L++
Sbjct: 229 LLHATTNFTVDIVLAVLLLVGGVIGAQVGTRIGVKLKAEQLRILLAIMVLVV 280


>gi|209548445|ref|YP_002280362.1| hypothetical protein Rleg2_0842 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534201|gb|ACI54136.1| protein of unknown function DUF81 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 243

 Score = 79.3 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 95/255 (37%), Gaps = 19/255 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   IV  F +  + G  G+  G++    L  AF +   + S   HVA          T+
Sbjct: 5   IFFFIVVGFCAQIVDGALGMAFGVLSTTSLL-AFGVPAANASAMTHVAE-------MFTT 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H  H  ++ +++        I   + + +++++D   +    + + + +G+L+ 
Sbjct: 57  AASGISHAYHRNVDWRLVARLAPAGMIGGAIGAYLLANIDGKVIAPFVSAYLIAIGLLIF 116

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            +      ++   ++     G   G L    G G G      ++  G  + +   ++   
Sbjct: 117 YKAFRPPAKREVRDWAVPPVGFCGGVLDAIGGGGWGPVVTSTLVGRGHDLKRVIGSTNFT 176

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              +     L  I            +LG+  + + + ++   ++  P    L   +  + 
Sbjct: 177 EFAVTLTISLTFIL-----------TLGWSELNSAIGLIIGGVIAAPFGAILVKRLPVRA 225

Query: 263 LTIGFSMIMFTTSFV 277
           L +  SM++  TS +
Sbjct: 226 LMVAVSMVIIVTSAI 240


>gi|217959028|ref|YP_002337576.1| hypothetical protein BCAH187_A1613 [Bacillus cereus AH187]
 gi|217067391|gb|ACJ81641.1| putative membrane protein [Bacillus cereus AH187]
          Length = 266

 Score = 79.3 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 56/275 (20%), Positives = 110/275 (40%), Gaps = 40/275 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T +
Sbjct: 4   IMLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGL 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +H  ++ K             ++ S     + +   +  F IF + + IL++ 
Sbjct: 57  SSTLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLKQDTFSLYFGIFLIFVSILLML 116

Query: 144 RDRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL 183
           RD+L           +R F DN    +              + GF+SG  G+GGG     
Sbjct: 117 RDKLKPLSLSNMTVIKRSFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGIGGGALLVP 176

Query: 184 -LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            +ML +    + A ATS  +  L A  +    I            SLG V+    LI++P
Sbjct: 177 AMMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWIYALILIP 224

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + +   +   ++  +    +     + +      
Sbjct: 225 GAWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 259


>gi|296331778|ref|ZP_06874245.1| putative integral inner membrane protein [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675832|ref|YP_003867504.1| putative integral inner membrane protein [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296151103|gb|EFG91985.1| putative integral inner membrane protein [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414076|gb|ADM39195.1| putative integral inner membrane protein [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 273

 Score = 79.3 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 106/273 (38%), Gaps = 32/273 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             +++V   ++GT+  L G+GGG+V+VP L     +  +   +   VA+GTSL VI  T 
Sbjct: 3   FVILVVLGLIAGTVGSLIGLGGGIVIVPSLMFLSTVTPLFQDVTPQVAIGTSLLVIIFTG 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S + + ++ T++ K    +       +++ + +    + +  +  F IF +L+ + ++
Sbjct: 63  LSSTLAYIKYKTVDYKSGLIFFIGSGPGSIIGAYVSKLFNSNSFSIWFGIFMILISLSLM 122

Query: 143 KRDRLYCERKFPDNYVKYI---------------WGMVTGFL-----SGALGVGGGIFTN 182
            + +     K     ++                  G+   F+           GG +   
Sbjct: 123 LKAKARPVNKAHKGIIRTFQDDAGEPYTYSYQAPIGIAIAFVVGFLGGLFGIGGGSLMVP 182

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            +ML +      A ATS  +  L +    +  + S            G VN    L ++P
Sbjct: 183 AMMLLFLFPPKVAVATSMFIIFLSSMTGSVSHVIS------------GHVNWLYALALVP 230

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            +     L   ++  +  K + +   +++    
Sbjct: 231 GAWFGGKLGAAINRKMQTKTIVMIMRIVLILIG 263



 Score = 39.7 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 7/97 (7%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP +   F            VA+ TS+ +I  +S+   + H   G +N       +  
Sbjct: 179 LMVPAMMLLFLF-------PPKVAVATSMFIIFLSSMTGSVSHVISGHVNWLYALALVPG 231

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                 + + +   +    +     I  +L+G  ++ 
Sbjct: 232 AWFGGKLGAAINRKMQTKTIVMIMRIVLILIGCQLIY 268


>gi|162149595|ref|YP_001604056.1| hypothetical protein GDI_3834 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209544826|ref|YP_002277055.1| hypothetical protein Gdia_2702 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161788172|emb|CAP57777.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209532503|gb|ACI52440.1| protein of unknown function DUF81 [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 271

 Score = 79.3 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 57/261 (21%), Positives = 96/261 (36%), Gaps = 25/261 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L + +  L G   GL G GG ++ VP++     L         HVA+GTS   +A  ++ 
Sbjct: 8   LGVASGVLVGFTLGLVGGGGSILAVPLMVYLVGLRD------AHVAIGTSAAAVAVNALA 61

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
               H R  T+  +    +     +  ++ +     V    L  AFA+  + +G+LML+ 
Sbjct: 62  GLASHARAHTVRWRCAAVFAAAGVLGALLGAHAGKIVGGQRLLLAFAVLMVGVGVLMLRG 121

Query: 145 D----RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATS 199
                         +       G+ TG LSG  G+GGG      LM   G  I  A  TS
Sbjct: 122 RDGAGDPDATCTRDNAGRIAGTGLATGLLSGFFGIGGGFLIVPGLMASTGMPILNAVGTS 181

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI- 258
               A+  F        SG             V+     + +   +  +   T+ +  + 
Sbjct: 182 LVAVAVFGFSTTASYALSGL------------VDWPLAGLFVAGGVAGSLGGTRAARRLA 229

Query: 259 -GKKYLTIGFSMIMFTTSFVF 278
             +  L   F+ ++F  +F  
Sbjct: 230 GSRGALARVFACVIFVVAFYM 250



 Score = 40.8 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 9/121 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I      +G LSG FG+GGG ++VP L            + +  A+GTSL  +A     +
Sbjct: 140 IAGTGLATGLLSGFFGIGGGFLIVPGLMA-------STGMPILNAVGTSLVAVAVFGFST 192

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS--FLNKAFAIFCLLMGILMLK 143
              +   G ++  +   ++      ++  +     +  S   L + FA    ++   M+ 
Sbjct: 193 TASYALSGLVDWPLAGLFVAGGVAGSLGGTRAARRLAGSRGALARVFACVIFVVAFYMIW 252

Query: 144 R 144
           R
Sbjct: 253 R 253


>gi|314935240|ref|ZP_07842593.1| putative membrane protein [Staphylococcus hominis subsp. hominis
           C80]
 gi|313656575|gb|EFS20314.1| putative membrane protein [Staphylococcus hominis subsp. hominis
           C80]
          Length = 243

 Score = 79.3 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 106/253 (41%), Gaps = 15/253 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++V   L G +SGL G+GG +V+          +    +   ++A G +   +  +++  
Sbjct: 1   MLVIGILGGFISGLVGIGGAIVIY-PALLLLPPLFGLPTYSAYIASGLTSSQVFFSTLSG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            +   ++   +  ++ +    + I +++ +++ + ++  F+N  + I  LL  ILM  + 
Sbjct: 60  SLNAYKNKNFSRTLILNMGSGMVIGSMLGAILANLINVQFVNTVYIIIALLALILMFIKV 119

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSA 204
                    +  +    G + G +SG +G GG       L++ +   +      S  ++ 
Sbjct: 120 TPSTSHIKFNRLLLITIGGIIGLVSGIVGAGGAFIIIPVLLVIFKLPMNMVVTNSIVIAF 179

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           + +  A ++++              G++ I + + ++  SIL TPL  K+   I   Y+ 
Sbjct: 180 ISSIGAFMIKLLQ------------GYIPINSAIPLILGSILFTPLGMKMGQKIP-DYIQ 226

Query: 265 IGFSMIMFTTSFV 277
                I+   + +
Sbjct: 227 KTIICILIVVAII 239



 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+I    + G +SG+ G GG  +++PVL   F+L        M++ +  S+ +   +S+
Sbjct: 131 LLLITIGGIIGLVSGIVGAGGAFIIIPVLLVIFKL-------PMNMVVTNSIVIAFISSI 183

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +FM     G I +      I    + T +   M   +          I  ++  I ++ 
Sbjct: 184 GAFMIKLLQGYIPINSAIPLILGSILFTPLGMKMGQKIPDYIQKTIICILIVVAIIKLIF 243


>gi|170289902|ref|YP_001736718.1| permease [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170173982|gb|ACB07035.1| Predicted permease [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 258

 Score = 79.3 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 94/243 (38%), Gaps = 28/243 (11%)

Query: 45  GLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWI 104
            ++M+P L+  F          + +A+GT++  +  T+    + H R G ++    K   
Sbjct: 26  CVIMLPALAFLFGYQ-------LPIAIGTTITAVIITATSGAIGHIRIGNVDYGTAKVVA 78

Query: 105 FVLPITTVVTSLMISHVDKS--FLNKAFAIFCLLMGILML-----KRDRLYCERKFPDNY 157
               I   + SL+   +  +   L+    +  L + + M+     +       ++ P + 
Sbjct: 79  ISGAIGAFIGSLIFILLAGNISILSLILGLAFLYVAVRMVYEGLRRSIGAKDGKEIPGSS 138

Query: 158 -VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
             K I G + G L+G +G+GGG       +   G+ +  A  TS      +A  +   ++
Sbjct: 139 KKKGILGFLIGILTGIVGLGGGYALVPSFIYLLGSPVKIAVGTSLASFISMALVSGAFKL 198

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                         G+V++ A L++   + +   +  +L   +    + I F ++    S
Sbjct: 199 IQ------------GYVDVIAALLLGIGTAVGAQIGARLVARVPAWVIKILFGLVFLYVS 246

Query: 276 FVF 278
             F
Sbjct: 247 LKF 249



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 46/116 (39%), Gaps = 7/116 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +  FL G L+G+ G+GGG  +VP                + +A+GTSL      +++S  
Sbjct: 143 ILGFLIGILTGIVGLGGGYALVPSFIYLL-------GSPVKIAVGTSLASFISMALVSGA 195

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                G +++           +   + + +++ V    +   F +  L + +  + 
Sbjct: 196 FKLIQGYVDVIAALLLGIGTAVGAQIGARLVARVPAWVIKILFGLVFLYVSLKFIL 251


>gi|172056396|ref|YP_001812856.1| hypothetical protein Exig_0355 [Exiguobacterium sibiricum 255-15]
 gi|171988917|gb|ACB59839.1| protein of unknown function DUF81 [Exiguobacterium sibiricum
           255-15]
          Length = 258

 Score = 79.3 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 99/263 (37%), Gaps = 18/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +I  I +  F+   +SG+ G+GG ++  P+L     L+G   +   H   G S   + 
Sbjct: 3   IGFIVTIFLIGFVGSYISGMLGIGGSIIKYPMLLYIPPLLGF-AAFSAHEVAGISAIQVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++     +R+ G +N  ++      + I + + +   + + +  +N  + I  L   +
Sbjct: 62  FATIGGVWAYRKGGYLNKSLIVSMGGAILIGSFIGAYGSNVLAEDTINIVYGILALTAAV 121

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI-----FTNLLMLFYGASIYK 194
           +M    +   +               + F+ G      G         ++++        
Sbjct: 122 MMFVPKKGLDDIPLDQVRFNKTIAASSAFIVGVGAGIVGAAGAFLLVPIMLVVLKIPTRM 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             A+S  ++ + +  A + +I +G             V+ G   +++  S++  PL    
Sbjct: 182 TIASSLAITFISSIGATVGKITTGQ------------VDWGPAAVMVVASLIAAPLGAIA 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K L I  ++++  T+  
Sbjct: 230 GKKMNTKILQIILAVLILATAVK 252



 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/99 (11%), Positives = 35/99 (35%), Gaps = 7/99 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            ++VP++    +       I   + + +SL +   +S+ + +     G ++       + 
Sbjct: 165 FLLVPIMLVVLK-------IPTRMTIASSLAITFISSIGATVGKITTGQVDWGPAAVMVV 217

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              I   + ++    ++   L    A+  L   + +   
Sbjct: 218 ASLIAAPLGAIAGKKMNTKILQIILAVLILATAVKIWLD 256


>gi|332884285|gb|EGK04553.1| hypothetical protein HMPREF9456_00880 [Dysgonomonas mossii DSM
           22836]
          Length = 282

 Score = 79.3 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 48/285 (16%), Positives = 103/285 (36%), Gaps = 47/285 (16%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  ++ + +  +G +  L G+GGG++++P+L+  F        + +  A+G +L     T
Sbjct: 8   FSLVLFIGACFAGFIGSLTGLGGGVIVIPILTLGF-------GVDIRYAVGAALVTSIAT 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  +   + + G  N++I            V  +++  ++DK ++     +  +   I  
Sbjct: 61  SSGAAAAYIKEGITNVRIGMFLEIATTTGAVAGAIVAMYLDKMYIAIILGVVLIFSAIRS 120

Query: 142 LKRDRLYCERKFPDN---------------------------YVKYIWGMVTGFLSGALG 174
           + +     +   P +                              Y    V G LSG LG
Sbjct: 121 VSKKEDGIDYSAPGDKLGDKLKLNGSYPTKDGRVEKYNVHNVIGGYSLMTVAGVLSGLLG 180

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G    L M          +T TS  +  + A  + ++    G+   GL         
Sbjct: 181 IGSGSLKVLAMDTAMKIPFKVSTTTSNFMVGVTAAASAVIYFQRGYIDPGL--------- 231

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               + I+   +L     +K+      + L + FS+++F  +   
Sbjct: 232 ---AMPIVVGVLLGAFFGSKILPKANVRNLRLLFSVVIFFLAVSM 273



 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G LSGL G+G G + V         M     I   V+  TS  ++  T+  S + + +
Sbjct: 171 VAGVLSGLLGIGSGSLKV-------LAMDTAMKIPFKVSTTTSNFMVGVTAAASAVIYFQ 223

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G I+  +    +  + +     S ++   +   L   F++    + + M+  
Sbjct: 224 RGYIDPGLAMPIVVGVLLGAFFGSKILPKANVRNLRLLFSVVIFFLAVSMIYN 276


>gi|218896481|ref|YP_002444892.1| hypothetical protein BCG9842_B3838 [Bacillus cereus G9842]
 gi|218541679|gb|ACK94073.1| putative membrane protein [Bacillus cereus G9842]
          Length = 266

 Score = 79.3 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 56/275 (20%), Positives = 111/275 (40%), Gaps = 40/275 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T +
Sbjct: 4   IMLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGL 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ 
Sbjct: 57  SSTLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLML 116

Query: 144 RDRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL 183
           RD+L           +R F DN    +              + GF+SG  G+GGG     
Sbjct: 117 RDKLKPLSLSNTSVIKRSFTDNDGNAVHYQFPPFLAIFIAFIVGFISGLFGIGGGALLVP 176

Query: 184 -LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            +ML +    + A ATS  +  L A  +    I            SLG V+    LI++P
Sbjct: 177 AMMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWIYALILIP 224

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + +   +   ++  +    +     + +      
Sbjct: 225 GAWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 259


>gi|332982857|ref|YP_004464298.1| hypothetical protein Mahau_2309 [Mahella australiensis 50-1 BON]
 gi|332700535|gb|AEE97476.1| protein of unknown function DUF81 [Mahella australiensis 50-1 BON]
          Length = 261

 Score = 79.3 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 102/273 (37%), Gaps = 38/273 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            LI+    ++G ++GL G  G +V+VP L                 A+G SL +    S+
Sbjct: 5   VLILFIGCVAGVVTGLIGASGVMVVVPALVIL--------GYATSDAIGASLFIDTIASL 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +    + ++  +N+K              + SL+   +    LN AF+IF ++  ++   
Sbjct: 57  VVAWTYYQNKNLNLKQGIWIAIGSVGGAQIGSLISPLIPDVGLNSAFSIFLVITAVIFWF 116

Query: 144 RDRLYCERKFPDNYVK-----------------YIWGMVTGFLSGALGVGGGIFTNLLML 186
           R          +N                     + G++ G +SG LG GGG+   L+++
Sbjct: 117 RGAKGGAPDLNNNVATQQSSILKLLRSNVIISGLLLGILVGIISGLLGAGGGVMILLILV 176

Query: 187 F-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           F    S+++   TS  + A  A    +    S    + LP        + A +     ++
Sbjct: 177 FVMQYSMHEGIGTSTLIMAFTAASGAIGHAIS----SNLP--------LKAAIYGAIGTL 224

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +    A + +  + +K L+     +      + 
Sbjct: 225 IGGRFAARFANKVNEKVLSKVVGGVFAALGVIM 257



 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 7/122 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + I   ++   L G +SGL G GGG++++ +L    Q         MH  +GTS  ++A 
Sbjct: 144 NVIISGLLLGILVGIISGLLGAGGGVMILLILVFVMQY-------SMHEGIGTSTLIMAF 196

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T+    + H     + +K          I     +   + V++  L+K        +G++
Sbjct: 197 TAASGAIGHAISSNLPLKAAIYGAIGTLIGGRFAARFANKVNEKVLSKVVGGVFAALGVI 256

Query: 141 ML 142
           ML
Sbjct: 257 ML 258


>gi|183599360|ref|ZP_02960853.1| hypothetical protein PROSTU_02829 [Providencia stuartii ATCC 25827]
 gi|188021598|gb|EDU59638.1| hypothetical protein PROSTU_02829 [Providencia stuartii ATCC 25827]
          Length = 281

 Score = 79.3 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 51/283 (18%), Positives = 94/283 (33%), Gaps = 47/283 (16%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +++A+F +  L G+ G+  G+ +VP+L   F        I +H+A+G SL  +   S 
Sbjct: 4   LWLVLAAFSASALGGVLGMASGIFIVPILIFIF-------GIDIHIAIGASLISVIACSC 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +S     +    N+++         I  +    +I  +    L   FAI   L    ML 
Sbjct: 57  VSAAPFLKRRLANVRLAIVLETATTIGALTGVFLIGIISTPVLYGLFAIILGLSAKQMLT 116

Query: 144 RDRLYCERKFPDN---------------------------YVKYIWGMVTGFLSGALGVG 176
           R         P                              +  +     G LS  LG+G
Sbjct: 117 RRHQTHHVTSPPTSWASRLQLHASYPDRVGKEVSYQIGHLPLGMLLMYGAGLLSALLGIG 176

Query: 177 GGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
            G+     M       +  ++ATS  +  + A  +                   G ++I 
Sbjct: 177 SGVLKIPAMDSALRLPLKVSSATSNFMIGVTATASACAYFVR------------GDIDID 224

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               I   S++   +  +L   +  + L I F +I+   +   
Sbjct: 225 IAGPITLGSVIGALIGARLLMWLPAEKLRIFFVIILALLAVQM 267



 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 7/125 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + ++ L ++  + +G LS L G+G G++ +P +  A +L        + V+  TS  +I 
Sbjct: 153 IGHLPLGMLLMYGAGLLSALLGIGSGVLKIPAMDSALRL-------PLKVSSATSNFMIG 205

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   +   G I++ I         I  ++ + ++  +    L   F I   L+ +
Sbjct: 206 VTATASACAYFVRGDIDIDIAGPITLGSVIGALIGARLLMWLPAEKLRIFFVIILALLAV 265

Query: 140 LMLKR 144
            ML  
Sbjct: 266 QMLLS 270


>gi|224825386|ref|ZP_03698491.1| protein of unknown function DUF81 [Lutiella nitroferrum 2002]
 gi|224602307|gb|EEG08485.1| protein of unknown function DUF81 [Lutiella nitroferrum 2002]
          Length = 257

 Score = 79.3 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 80/216 (37%), Gaps = 15/216 (6%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
             +A GT+L ++ P  ++ F  +R+     ++          ++T   + +   +D   L
Sbjct: 46  QQMAQGTALVMMVPNVLIGFWRYRQRNPFPLRTALTIGLASIVSTYPAARLAVALDARAL 105

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFPDNYV----KYIWGMVTGFLSGALGVGGGIFTN 182
             AFA+  L +    +   R     +              G+V G  +G   VG  I   
Sbjct: 106 KLAFAVLLLWLAGYFVWISRRQAGGEVRSAGWNERYLPAVGVVGGLFAGLFSVGAVIVAA 165

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            +++  G    +A A   G++  +  P  LV + + +       W LG         +  
Sbjct: 166 PILV-QGFGKRQAVA--QGLALALVVPGALVALAT-YSRAQHVDWHLG-------APLAV 214

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             +        L++ + ++ L   F++++  T+ + 
Sbjct: 215 GGMATISWGVALAHRLPERRLKQLFALMLLGTAILM 250



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 7/122 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +     + G  +GLF VG  +V  P+L + F            VA G +L ++ P +++
Sbjct: 141 YLPAVGVVGGLFAGLFSVGAVIVAAPILVQGF-------GKRQAVAQGLALALVVPGALV 193

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +   + R   ++  +          T      +   + +  L + FA+  L   ILM++ 
Sbjct: 194 ALATYSRAQHVDWHLGAPLAVGGMATISWGVALAHRLPERRLKQLFALMLLGTAILMMQP 253

Query: 145 DR 146
            R
Sbjct: 254 HR 255


>gi|27467533|ref|NP_764170.1| hypothetical protein SE0615 [Staphylococcus epidermidis ATCC 12228]
 gi|293368299|ref|ZP_06614927.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|27315077|gb|AAO04212.1|AE016746_2 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|291317546|gb|EFE57964.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329726803|gb|EGG63263.1| putative membrane protein [Staphylococcus epidermidis VCU144]
 gi|329737583|gb|EGG73829.1| putative membrane protein [Staphylococcus epidermidis VCU045]
          Length = 275

 Score = 79.3 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 93/249 (37%), Gaps = 33/249 (13%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L        +   I   +A+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTLVYLGVNHHLLHGITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            ++V S +  ++     N  F +F + + IL++ R ++   + F                
Sbjct: 92  GSLVGSFLSRYLTLDSFNLYFGVFMIFVSILLMIRHKIKPFKIFDKPKYARTYVDAEGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                     +I  +  G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YRYSVPPLFAFITTLFIGLLTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            + +  I+             G V  G  +I++  S++   +  +++  +    + +   
Sbjct: 212 MSSIGHIFQ------------GHVAWGYSIILIISSVIGAQIGVRVNRSMKSDTVVMLLR 259

Query: 269 MIMFTTSFV 277
            +M      
Sbjct: 260 TVMLIMGIY 268


>gi|282874767|ref|ZP_06283646.1| conserved domain protein [Staphylococcus epidermidis SK135]
 gi|281296483|gb|EFA88998.1| conserved domain protein [Staphylococcus epidermidis SK135]
 gi|329733694|gb|EGG70021.1| putative membrane protein [Staphylococcus epidermidis VCU028]
          Length = 246

 Score = 79.3 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 107/252 (42%), Gaps = 14/252 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++++     G +SGL G+GG +++   +      +    +   ++A G +   +  ++
Sbjct: 1   MIIMLLIGIFGGFISGLVGIGGAIIIY-PMLLLLPPLVGLPTYSAYIASGLTSSQVFFST 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +    +  ++   +  ++ +    + I +++ +++ + ++  F+N  + I  LL  ILM 
Sbjct: 60  LSGSFKAYKNKDFSRTLVLNMGSGMIIGSILGAILANLINVQFVNMVYIIIALLALILMF 119

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAG 201
            +          +  +    G + G +SG +G GG       L++ +   +      S  
Sbjct: 120 IKVAPSTSHIKFNRLLLITIGGIIGLVSGIVGAGGAFIIIPVLLVIFKLPMNTVVTNSIV 179

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           ++ + +  A ++++              G++ + + + ++  SIL TPL  K+   I   
Sbjct: 180 IAFISSIGAFIIKLLQ------------GYIPVNSAIPLILGSILFTPLGMKIGQKIPDY 227

Query: 262 YLTIGFSMIMFT 273
              +  S+++  
Sbjct: 228 IQKMIVSILIVI 239


>gi|218667447|ref|YP_002426656.1| hypothetical protein AFE_2258 [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|218519660|gb|ACK80246.1| membrane protein, putative [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 296

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 55/293 (18%), Positives = 100/293 (34%), Gaps = 56/293 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I LII    + G LSGL GVGGG ++ P+L            +   VA+GT    I   S
Sbjct: 5   IWLIIGFGLIVGFLSGLTGVGGGFLITPLLIFV--------GVPPLVAVGTGAAQIVGAS 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFCLLM 137
            +    H R G ++M++    +    +  ++   +   +D S      +   +      +
Sbjct: 57  AVGSYAHWRMGNVDMRMAFILLAGSWMGGLLGVHVARILDASGYFGLVVTFLYVGLLGFI 116

Query: 138 GILML-------------KRDRLYCERKFP------------------DNYVKYIWGMVT 166
           GI ML              +++       P                        + G V 
Sbjct: 117 GISMLVESTLAMRWGHHPGKNKKKARAGIPWLDRLPWRMEFPVSGLRLSILAPVLLGFVV 176

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G ++  +GVGGG     +ML+           TS       +  A +  + +G      P
Sbjct: 177 GIMAALMGVGGGFVMVPIMLYLLKMPTRVVVGTSLFQLLFTS--AEVGILQAGMNHAVDP 234

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                      VL ++  SI  T    +L  ++  + L +  ++++   +   
Sbjct: 235 YL---------VLALVLGSIFGTQFGARLGALMRGEQLRLVLALVVMGVAIKM 278



 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 8/130 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   ++  F+ G ++ L GVGGG VMVP++    +       +   V +GTSL  +  TS
Sbjct: 166 ILAPVLLGFVVGIMAALMGVGGGFVMVPIMLYLLK-------MPTRVVVGTSLFQLLFTS 218

Query: 83  V-MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             +  ++   +  ++  ++   +      T   + + + +    L    A+  + + I M
Sbjct: 219 AEVGILQAGMNHAVDPYLVLALVLGSIFGTQFGARLGALMRGEQLRLVLALVVMGVAIKM 278

Query: 142 LKRDRLYCER 151
                +  E 
Sbjct: 279 GLGLVIPPEH 288


>gi|57866438|ref|YP_188101.1| hypothetical protein SERP0509 [Staphylococcus epidermidis RP62A]
 gi|282875582|ref|ZP_06284453.1| putative membrane protein [Staphylococcus epidermidis SK135]
 gi|57637096|gb|AAW53884.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
 gi|281295609|gb|EFA88132.1| putative membrane protein [Staphylococcus epidermidis SK135]
 gi|329736846|gb|EGG73111.1| putative membrane protein [Staphylococcus epidermidis VCU028]
          Length = 275

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 75/190 (39%), Gaps = 21/190 (11%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L        +   I   +A+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTLVYLGVNHHLLHGITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------------- 155
            ++V S +  ++     N  F +F + + IL++ R ++   + F                
Sbjct: 92  GSLVGSFLSRYLTLDSFNLYFGVFMIFVSILLMIRHKIKPFKIFDKPKYARTYVDAEGKT 151

Query: 156 ------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                     +I  +  G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YRYSVPPLFAFITTLFIGLLTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSG 218
            + +  I+ G
Sbjct: 212 MSSIGHIFQG 221


>gi|315506355|ref|YP_004085242.1| hypothetical protein ML5_5631 [Micromonospora sp. L5]
 gi|315412974|gb|ADU11091.1| protein of unknown function DUF81 [Micromonospora sp. L5]
          Length = 298

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 91/260 (35%), Gaps = 23/260 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L +  + L G   GL G GG ++ VP+L            +    A+ TSL V+ 
Sbjct: 1   MTTLALTLAGAVLIGVTLGLLGGGGSILAVPLLVYV-------ADLPAKEAIATSLLVVG 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS +  + H     +  +    +             +   V    L   FA+  L   +
Sbjct: 54  VTSAVGVLPHAWANRVRWRTGLIFGVAGMTGAYAGGRLAEFVPAGVLLTGFALMMLATAV 113

Query: 140 LMLKRDRLYCERKFPDNYVKY---IWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKA 195
            ML+  R    R  P           G+V G ++G +G GGG      +    G  +  A
Sbjct: 114 AMLRGRRSAEGRPVPHELPMLRVVGDGVVVGLVTGLVGAGGGFLVVPALALLGGLPMPIA 173

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TS  V A+ +F  L   + S              ++ G    +   +++ + L  +L+
Sbjct: 174 VGTSLVVIAMKSFAGLAGYLSSVQ------------IHWGLAAGVTAAAVVGSLLGGRLA 221

Query: 256 YMIGKKYLTIGFSMIMFTTS 275
             I    L  GF   +    
Sbjct: 222 GRIPADLLRRGFGWFVVVMG 241



 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 7/108 (6%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
            GGG ++VP L+           + M +A+GTSL VIA  S      +     I+  +  
Sbjct: 152 AGGGFLVVPALALL-------GGLPMPIAVGTSLVVIAMKSFAGLAGYLSSVQIHWGLAA 204

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
                  + +++   +   +    L + F  F ++MG+ +L +     
Sbjct: 205 GVTAAAVVGSLLGGRLAGRIPADLLRRGFGWFVVVMGVFVLAQQLPPL 252


>gi|197123917|ref|YP_002135868.1| hypothetical protein AnaeK_3526 [Anaeromyxobacter sp. K]
 gi|196173766|gb|ACG74739.1| protein of unknown function DUF81 [Anaeromyxobacter sp. K]
          Length = 255

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 89/262 (33%), Gaps = 26/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+      +GTL  L G+GGG+++VP+L+  F        +    A+  SL VI  +S 
Sbjct: 4   LLLASVGLGAGTLGALMGIGGGIIVVPILTAGF-------GLPFRHAVAVSLVVIIASSS 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   +      +M++            ++ S +        L   FA   +   ++M +
Sbjct: 57  SAAASYVDRKLSDMRVGVVLELATVTGAMLGSAVAGLAPVGLLKALFAAVAVYSALVMWR 116

Query: 144 RDRLYCERKFPDNYVKYIWGM------VTGFLSGALGVGGGIFTNLLMLFYG-ASIYKAT 196
           R     +    + YV   WG       V G +SG +GVGGG     +M          A 
Sbjct: 117 RRPAGPQAAEGEPYVVRRWGTGLGASAVAGAISGLIGVGGGFIKVPVMTLAMELPFKVAV 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           ATS  +  + A  +  V    G     +               ++        L   L  
Sbjct: 177 ATSNFMIGVTAAASAYVYYARGDLEVAV------------AAPVVVGVFAGARLGATLLG 224

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            I    L   FS ++       
Sbjct: 225 RIPAARLQAAFSALLVLLGGRM 246



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 13/125 (10%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLV 213
              +    G+  G L   +G+GGGI    ++   +G     A A S  V    +  A   
Sbjct: 2   TALLLASVGLGAGTLGALMGIGGGIIVVPILTAGFGLPFRHAVAVSLVVIIASSSSAAAS 61

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            +        L    +G       +++   ++    L + ++ +     L   F+ +   
Sbjct: 62  YV-----DRKLSDMRVG-------VVLELATVTGAMLGSAVAGLAPVGLLKALFAAVAVY 109

Query: 274 TSFVF 278
           ++ V 
Sbjct: 110 SALVM 114


>gi|199597888|ref|ZP_03211313.1| Predicted permease [Lactobacillus rhamnosus HN001]
 gi|258507211|ref|YP_003169962.1| permease [Lactobacillus rhamnosus GG]
 gi|199591145|gb|EDY99226.1| Predicted permease [Lactobacillus rhamnosus HN001]
 gi|257147138|emb|CAR86111.1| Permease [Lactobacillus rhamnosus GG]
 gi|259648580|dbj|BAI40742.1| putative transporter protein [Lactobacillus rhamnosus GG]
          Length = 280

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 101/291 (34%), Gaps = 50/291 (17%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + L++    L G L  + G+GGG+++ P+L+           + +  A+G S+  + 
Sbjct: 1   MEQMLLLMGTGVLGGILGAVLGIGGGMIITPILTMLM-------GLPIQYAIGASIVSVI 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  + + + +   +N+++         +  V+ +++   V+   L   F    +    
Sbjct: 54  ATSSGATIAYLKDEMLNLRVAMFLEIATTVGAVIGAVITGLVNGKVLYILFGALLIFSAF 113

Query: 140 LMLKRDRLY------------------------------CERKFPDNYVKYIWGMVTGFL 169
            M+++ R+                                     +    +      G  
Sbjct: 114 NMIRKLRMKDDGVRQTTPDAMATKLRLNGTYFDKATGKEVNYTVTNVPGGFAMMFGAGIA 173

Query: 170 SGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG LG+G G F  + M       +  ++ATS  +  + A  +  V  + G     +    
Sbjct: 174 SGLLGIGSGAFKVIAMDTIMHMPLKPSSATSNLMMGVTAAASATVYYFGGQLQPQI---- 229

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                      +    ++   + +++  ++  K L + F  ++       A
Sbjct: 230 --------AAPLAIGILVGATVGSRVMQVLPNKVLRLIFIPVIGYMGIQMA 272



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV----AMGTSLGVIAPTSVMSF 86
           F +G  SGL G+G G   V           I     MH+    +  TS  ++  T+  S 
Sbjct: 168 FGAGIASGLLGIGSGAFKV-----------IAMDTIMHMPLKPSSATSNLMMGVTAAASA 216

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +   G +  +I       + +   V S ++  +    L   F      MGI M  +
Sbjct: 217 TVYYFGGQLQPQIAAPLAIGILVGATVGSRVMQVLPNKVLRLIFIPVIGYMGIQMALK 274


>gi|260431501|ref|ZP_05785472.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415329|gb|EEX08588.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 307

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 53/305 (17%), Positives = 105/305 (34%), Gaps = 56/305 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + V+L    +     L++      G LSG+FGVGGG ++ P+L       GI  +    V
Sbjct: 1   MHVYLPIAEISVSPFLLLGIGIAVGFLSGMFGVGGGFLITPLLFLI----GIPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ TS   +  +S    + H +  T+++K+    +    +   +  +  + + +      
Sbjct: 53  AVATSANQVVASSFSGVLAHLKRRTVDLKMGSVLLGGGLLGATIGMIAFNALKELGQVDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            +   + +F  L+G LM                                 + R      +
Sbjct: 113 AVQLCYVVFLGLIGSLMFVESVIAIRRTRQGGGTVTAARRRRGWIHAVPFKTRFRTSNLY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                  + G   G LS  +GVGGG      M++  G        TS      +A    +
Sbjct: 173 ISIIPPVMVGFGVGVLSAVMGVGGGFIMVPAMIYILGMPTKVVIGTSLFQIIFVAGFTTM 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           +   + +            V+I   L +L   ++     T L   +  + L I  ++++ 
Sbjct: 233 IHASTNFS-----------VDIVLALFLLIGGVIGAQFGTGLGARLKAEQLRILLAVMVM 281

Query: 273 TTSFV 277
             +  
Sbjct: 282 IVAAK 286


>gi|321312782|ref|YP_004205069.1| putative integral inner membrane protein [Bacillus subtilis BSn5]
 gi|320019056|gb|ADV94042.1| putative integral inner membrane protein [Bacillus subtilis BSn5]
          Length = 273

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 106/273 (38%), Gaps = 32/273 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             +++V   ++GT+  L G+GGG+V+VP L     +  +   +   VA+GTSL VI  T 
Sbjct: 3   FVILVVLGLIAGTVGSLIGLGGGIVIVPSLMFLSTVTELFQDVTPQVAIGTSLLVIIFTG 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S + + ++ T++ K    +       +++ + +    + +  +  F IF +L+ + ++
Sbjct: 63  LSSTLAYIKYKTVDYKSGLIFFIGSGPGSMIGAYVSKLFNSNSFSVWFGIFMILISLSLM 122

Query: 143 KRDRLYCERKFPDNYVKYI---------------WGMVTGFL-----SGALGVGGGIFTN 182
            + +     K     ++                  G+   F+           GG +   
Sbjct: 123 LKAKARPINKAHKGIIRTFQDDAGEPYTYSYQASVGIAIAFVVGFLGGLFGIGGGSLMVP 182

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            +ML +      A ATS  +  L +    +  + S            G VN    L ++P
Sbjct: 183 AMMLLFLFPPKVAVATSMFIIFLSSMTGSVSHMIS------------GHVNWLYALALVP 230

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            +     L   ++  +  K + +   +++    
Sbjct: 231 GAWFGGKLGAAINRKMQTKTIVMIMRIVLILIG 263



 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 7/97 (7%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP +   F            VA+ TS+ +I  +S+   + H   G +N       +  
Sbjct: 179 LMVPAMMLLFLF-------PPKVAVATSMFIIFLSSMTGSVSHMISGHVNWLYALALVPG 231

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                 + + +   +    +     I  +L+G  ++ 
Sbjct: 232 AWFGGKLGAAINRKMQTKTIVMIMRIVLILIGCQLIY 268


>gi|254510226|ref|ZP_05122293.1| membrane protein [Rhodobacteraceae bacterium KLH11]
 gi|221533937|gb|EEE36925.1| membrane protein [Rhodobacteraceae bacterium KLH11]
          Length = 321

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 79/226 (34%), Gaps = 44/226 (19%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
            G LSG+FGVGGG +M P+L       GI  +    VA+ T    I  +S    + H R 
Sbjct: 39  VGILSGMFGVGGGFLMTPLLFFI----GIPPA----VAVATEANQIVASSFSGVLAHFRR 90

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGILML----- 142
            T+++K+    +        +  ++ +++         +   + +F  ++G LM      
Sbjct: 91  RTVDLKMGTVLLVGGLAGAALGVILFNYLKSLGQVDLLVKLCYVVFLGVIGSLMFVESLN 150

Query: 143 -------------------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
                                     + R      +       + G+  G LS  +GVGG
Sbjct: 151 ALRKSRKGGTPPAKRRQRGWIHALPFKMRFRTSGLYISVIPPVLVGLFVGVLSAIMGVGG 210

Query: 178 GIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           G      M++  G        TS      +     ++   + + ++
Sbjct: 211 GFIMVPAMIYLLGMPTKVVVGTSLFQIIFVTAFTTMLHATTNYTVD 256



 Score = 44.3 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 41/99 (41%), Gaps = 8/99 (8%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G LS + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 193 VLVGLFVGVLSAIMGVGGGFIMVPAMIYLL-------GMPTKVVVGTSLFQIIFVTAFTT 245

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           M H     T+++ +    +    +   + +++ + +   
Sbjct: 246 MLHATTNYTVDVVLAVLLLVGGVVGAQIGTVIGARMPAE 284


>gi|218674118|ref|ZP_03523787.1| hypothetical conserved membrane protein [Rhizobium etli GR56]
          Length = 197

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 76/199 (38%), Gaps = 11/199 (5%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S + H  H  I+ +++        I   + + ++++VD   +    + + + +G
Sbjct: 7   MFTTAASGLSHAYHRNIDWRLVARLAPAGMIGGAIGAYLLANVDGKVIEPFVSAYLIAIG 66

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           +L+L +      R+   ++     G   G L    G G G      ++  G  + +   +
Sbjct: 67  LLILYKAFRPPGRREVRDWAVPPVGFCGGMLDAIGGGGWGPVVTSTLVGRGHDLKRVIGS 126

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +      +     L  I            +LG+  + + + ++   ++  P    L   +
Sbjct: 127 TNFTEFAVTLTISLTFIL-----------TLGWSELNSAVGLIIGGVIAAPFGAILVKRL 175

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             + L +  SM++ TTS +
Sbjct: 176 PVRALMVAVSMVIITTSAI 194


>gi|16080291|ref|NP_391118.1| integral inner membrane protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221311180|ref|ZP_03593027.1| hypothetical protein Bsubs1_17566 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315507|ref|ZP_03597312.1| hypothetical protein BsubsN3_17482 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320422|ref|ZP_03601716.1| hypothetical protein BsubsJ_17445 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324706|ref|ZP_03606000.1| hypothetical protein BsubsS_17596 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81342162|sp|O32134|YUNE_BACSU RecName: Full=UPF0721 transmembrane protein yunE
 gi|2635735|emb|CAB15228.1| putative integral inner membrane protein [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|291485703|dbj|BAI86778.1| hypothetical protein BSNT_04791 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 273

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 106/273 (38%), Gaps = 32/273 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             +++V   ++GT+  L G+GGG+V+VP L     +  +   +   VA+GTSL VI  T 
Sbjct: 3   FVILVVLGLIAGTVGSLIGLGGGIVIVPSLMFLSTVTQLFQDVTPQVAIGTSLLVIIFTG 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S + + ++ T++ K    +       +++ + +    + +  +  F IF +L+ + ++
Sbjct: 63  LSSTLAYIKYKTVDYKSGLIFFIGSGPGSMIGAYVSKLFNSNSFSVWFGIFMILISLSLM 122

Query: 143 KRDRLYCERKFPDNYVKYI---------------WGMVTGFL-----SGALGVGGGIFTN 182
            + +     K     ++                  G+   F+           GG +   
Sbjct: 123 LKAKARPINKAHKGIIRTFQDDAGEPYTYSYQASVGIAIAFVVGFLGGLFGIGGGSLMVP 182

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            +ML +      A ATS  +  L +    +  + S            G VN    L ++P
Sbjct: 183 AMMLLFLFPPKVAVATSMFIIFLSSMTGSVSHMIS------------GHVNWLYALALVP 230

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            +     L   ++  +  K + +   +++    
Sbjct: 231 GAWFGGKLGAAINRKMQTKTIVMIMRIVLILIG 263



 Score = 40.1 bits (93), Expect = 0.38,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 7/97 (7%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP +   F            VA+ TS+ +I  +S+   + H   G +N       +  
Sbjct: 179 LMVPAMMLLFLF-------PPKVAVATSMFIIFLSSMTGSVSHMISGHVNWLYALALVPG 231

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                 + + +   +    +     I  +L+G  ++ 
Sbjct: 232 AWFGGKLGAAINRKMQTKTIVMIMRIVLILIGCQLIY 268


>gi|328887336|emb|CCA60575.1| hypothetical protein SVEN_7289 [Streptomyces venezuelae ATCC 10712]
          Length = 290

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 87/237 (36%), Gaps = 27/237 (11%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP+L                 A+ TSL V+  TS+ + + H R   +  +    +  
Sbjct: 25  ILTVPILVYL-------AGQDTKEAVATSLFVVGVTSLAALVPHARALRVRWRTGLLFGA 77

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR------LYCERKFPDNYVK 159
                      +  +V  + L  AFA+  L   + ML+R R         ER  P  ++ 
Sbjct: 78  FSMAGAYGGGRLAEYVPGTALLVAFALMMLATAVAMLRRPRDGGEAARPAERDLPLRHI- 136

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
              G+  G ++G +G GGG      + +  G  +  A  TS  V A+ +F  L   + SG
Sbjct: 137 AAEGLAVGAVTGLVGSGGGFLLVPALAVLGGFPMGIAVGTSLLVIAMNSFAGLAGHL-SG 195

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            G           ++    L +   ++    +  +L+  + +  L   F   +    
Sbjct: 196 VG-----------IDWRLALTVTAAAVAGGLVGGRLAGRVPQDALRSAFGWFVVAVG 241



 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 51/139 (36%), Gaps = 7/139 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I       G ++GL G GGG ++VP L+             M +A+GTSL VIA  S   
Sbjct: 136 IAAEGLAVGAVTGLVGSGGGFLLVPALAVL-------GGFPMGIAVGTSLLVIAMNSFAG 188

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H     I+ ++            +V   +   V +  L  AF  F + +G+ +L + 
Sbjct: 189 LAGHLSGVGIDWRLALTVTAAAVAGGLVGGRLAGRVPQDALRSAFGWFVVAVGVFVLAQQ 248

Query: 146 RLYCERKFPDNYVKYIWGM 164
                   P         +
Sbjct: 249 LGTAALSHPAVLSGLGVAV 267


>gi|295706047|ref|YP_003599122.1| hypothetical protein BMD_3941 [Bacillus megaterium DSM 319]
 gi|294803706|gb|ADF40772.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 249

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 105/260 (40%), Gaps = 28/260 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I++     G + G  G GG   ++ +L+  +        + +H+A+ T+L  +  +S+  
Sbjct: 5   IVLTMLAVGLILGFVGAGGSGFIISILTLLY-------GVSVHIALATALTAMIFSSLSG 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF----CLLMGILM 141
            + H R G +++K       +  +   + S + S + +  L    A       +L+ + M
Sbjct: 58  AVSHYREGNVSLKSGISVGILGALGAWIGSNLSSFIPEGELKWLTAGMLLLSGVLLWLRM 117

Query: 142 LKRDRLYCERKFPDNYV----KYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
               R   ER  P          + G++TG LSG  G+G   F  L LM+  G SI ++ 
Sbjct: 118 FLFSRQQKERTVPTGAKFVAYSLLIGLITGALSGMFGIGSTPFIQLGLMMVLGLSIRQSA 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T+  V   IA    +     G            F++I  ++ ++  +++ + +  K + 
Sbjct: 178 GTTMLVIIPIAIGGGMGYYQQG------------FLDIPLLIQVVVGTMVGSYIGAKFTN 225

Query: 257 MIGKKYLTIGFSMIMFTTSF 276
            +    L      +   +SF
Sbjct: 226 RVPAPVLKTSLVALPICSSF 245


>gi|255030910|ref|ZP_05302861.1| hypothetical protein LmonL_20561 [Listeria monocytogenes LO28]
          Length = 220

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 113/241 (46%), Gaps = 25/241 (10%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++D I   ++A   +  +    G+GGG++++P+L     LMG+        +  T   + 
Sbjct: 1   IMDIITYFLIA-LSTSVVGSFLGIGGGVILLPILL----LMGVSQGTAAFSSALTVFTMA 55

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA-IFCLLM 137
             T   S    R+ G + + +          TT + +++   + ++     +  +  +L+
Sbjct: 56  IFT--CSIYYKRKQGNVGLAL--KIAVTSIPTTFIGAMVNQMLPEAVYRFLYGALIVVLL 111

Query: 138 GILMLKRDRLYCERKFPDNY--VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYK 194
           GI++ K+ R   +  F   Y  + Y++G++ GFL+G  G+GGG I   +L+L +  +   
Sbjct: 112 GIMIWKKKRNNEKPHFLSKYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQKT 171

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+ATS+ V+ L +  ++      G        +S+G       + ++P +I+   + T+L
Sbjct: 172 ASATSSYVTLLTSLASIGSYAIIGGS-----DFSIG-------IYMIPGAIIGALIGTRL 219

Query: 255 S 255
           +
Sbjct: 220 N 220


>gi|229166393|ref|ZP_04294150.1| hypothetical protein bcere0007_13660 [Bacillus cereus AH621]
 gi|228617135|gb|EEK74203.1| hypothetical protein bcere0007_13660 [Bacillus cereus AH621]
          Length = 262

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 56/274 (20%), Positives = 112/274 (40%), Gaps = 40/274 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    ++GT+  L G+GGG+++VP+L           ++   +A+GTS+  +  T + 
Sbjct: 1   MLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HNLSPQLAVGTSMVTVVFTGLA 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ R
Sbjct: 54  STLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLILR 113

Query: 145 DRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL- 183
           D+L           +R F DN    +              + GF+SG  G+GGG      
Sbjct: 114 DKLKPLSLSNMTVIKRSFTDNEGNTVDYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPA 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +    + A ATS  +  L A  + L  I            SLG V+    LI++P 
Sbjct: 174 MMLLFAFPAHIAVATSMFIVFLSAIVSSLTHI------------SLGNVSWAYALILIPG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   +   ++  +    +     + +      
Sbjct: 222 AWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 255


>gi|57652418|ref|YP_184959.1| hypothetical protein SACOL0049 [Staphylococcus aureus subsp. aureus
           COL]
 gi|57286604|gb|AAW38698.1| conserved domain protein [Staphylococcus aureus subsp. aureus COL]
          Length = 243

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 104/249 (41%), Gaps = 14/249 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++V   L G +SGL G+GG +V+          +    +   ++A G +   +  +++  
Sbjct: 1   MLVIGILGGFISGLVGIGGAIVIY-PALLLLPPLFGLPTYSAYIASGLTSSQVFFSTLSG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            ++  ++   +  ++ +    + I +++ +L+ +  +  F+N  + I  LL  ILM  + 
Sbjct: 60  SLKAYKNKNFSRTLILNMGSGMVIGSILGALLATVFNSQFVNVIYIIIALLALILMFIKV 119

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSA 204
                    +  +    G + G +SG +G GG       L++ +   +      S  ++ 
Sbjct: 120 TPSTSHIKFNRVLLITIGGIIGLVSGIVGAGGAFIIIPVLLVIFKLPMNMVVTNSIVIAF 179

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           + +  A ++++              G++ I + + ++  SIL TPL  K+   I      
Sbjct: 180 ISSIGAFIIKLLQ------------GYIPINSAIPLILGSILFTPLGMKIGQKIPDSIQK 227

Query: 265 IGFSMIMFT 273
              S+++  
Sbjct: 228 GIVSILIVI 236



 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+I    + G +SG+ G GG  +++PVL   F+L        M++ +  S+ +   +S+
Sbjct: 131 VLLITIGGIIGLVSGIVGAGGAFIIIPVLLVIFKL-------PMNMVVTNSIVIAFISSI 183

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +F+     G I +      I    + T +   +   +  S      +I  ++  I ++ 
Sbjct: 184 GAFIIKLLQGYIPINSAIPLILGSILFTPLGMKIGQKIPDSIQKGIVSILIVIAIIKLIF 243


>gi|30019601|ref|NP_831232.1| hypothetical protein BC1452 [Bacillus cereus ATCC 14579]
 gi|29895145|gb|AAP08433.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579]
          Length = 269

 Score = 79.0 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 59/281 (20%), Positives = 116/281 (41%), Gaps = 41/281 (14%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +++YI L+ +   ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  
Sbjct: 2   AILEYIMLLFI-GLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVT 53

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +  T + S + + +H  ++ K             ++ S     +++   +  F IF + +
Sbjct: 54  VVFTGLSSTLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFV 113

Query: 138 GILMLKRDRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGG 177
            IL++ RD+L           +R F DN    +              + GF+SG  G+GG
Sbjct: 114 SILLMLRDKLKPLSLSNTSVIKRSFTDNDGNTVHYQFPPFLAIFIAFIVGFISGLFGIGG 173

Query: 178 GIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G      +ML +    + A ATS  +  L A  +    I            SLG V+   
Sbjct: 174 GALLVPAMMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWIY 221

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            LI++P + +   +   ++  +    +     + +      
Sbjct: 222 ALILIPGAWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 262


>gi|229010855|ref|ZP_04168052.1| hypothetical protein bmyco0001_13100 [Bacillus mycoides DSM 2048]
 gi|228750529|gb|EEM00358.1| hypothetical protein bmyco0001_13100 [Bacillus mycoides DSM 2048]
          Length = 262

 Score = 79.0 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 57/274 (20%), Positives = 112/274 (40%), Gaps = 40/274 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T + 
Sbjct: 1   MLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGLA 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ R
Sbjct: 54  STLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLILR 113

Query: 145 DRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL- 183
           D+L           +R F DN    +              + GF+SG  G+GGG      
Sbjct: 114 DKLKPLSLSNMTVIKRSFTDNEGNTVDYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPA 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +    + A ATS  +  L A  + L  I            SLG V+    LI++P 
Sbjct: 174 MMLLFAFPAHIAVATSMFIVFLSAIVSSLTHI------------SLGNVSWAYALILIPG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   +   ++  +    +     + +      
Sbjct: 222 AWIGGKIGAYINTKLSGNAIINLLRITLIILGTR 255


>gi|254475159|ref|ZP_05088545.1| membrane protein [Ruegeria sp. R11]
 gi|214029402|gb|EEB70237.1| membrane protein [Ruegeria sp. R11]
          Length = 307

 Score = 79.0 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 108/305 (35%), Gaps = 56/305 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    V     L++    + G LSG+FGVGGG +M P+L       GI  +    V
Sbjct: 1   MQIYLPIAEVSVNAFLLLGLGGMVGILSGMFGVGGGFLMTPLLFFI----GIPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    I  +S    + H R  T+++K+         I   +  ++ +++        
Sbjct: 53  AVATEANQIVASSFSGVLAHFRRRTVDIKMGLVLQVGGLIGAALGVVVFNYLKALGQVDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            +   + +F  ++G LM                                 + R      +
Sbjct: 113 LVKLCYVVFLGVVGALMFIESLNAIRKSKKAGGTAPAARRQRGWVHALPFKMRFRTSGLY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                  + G+  G L+  +GVGGG      M++  G        TS     L+     +
Sbjct: 173 ISVIPPILVGVCVGILAAIMGVGGGFIMVPAMIYILGMPTKVVVGTSLFQIILVTAFTTM 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           +   + +            V+I   +++L   ++   + T++   +  + L I  ++++ 
Sbjct: 233 LHATTNYT-----------VDIVLAVLLLIGGVIGAQIGTRIGVYLKAEQLRILLAIMVL 281

Query: 273 TTSFV 277
                
Sbjct: 282 AVCIK 286



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+     G L+ + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 179 ILVGVCVGILAAIMGVGGGFIMVPAMIYIL-------GMPTKVVVGTSLFQIILVTAFTT 231

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H     T+++ +    +    I   + + +  ++    L    AI  L + I +    
Sbjct: 232 MLHATTNYTVDIVLAVLLLIGGVIGAQIGTRIGVYLKAEQLRILLAIMVLAVCIKLGLDL 291

Query: 146 RLYCER 151
            L    
Sbjct: 292 LLMPSD 297


>gi|222095183|ref|YP_002529243.1| hypothetical protein BCQ_1523 [Bacillus cereus Q1]
 gi|229195750|ref|ZP_04322512.1| hypothetical protein bcere0001_13150 [Bacillus cereus m1293]
 gi|221239241|gb|ACM11951.1| membrane protein, putative [Bacillus cereus Q1]
 gi|228587756|gb|EEK45812.1| hypothetical protein bcere0001_13150 [Bacillus cereus m1293]
          Length = 262

 Score = 79.0 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 56/274 (20%), Positives = 111/274 (40%), Gaps = 40/274 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T + 
Sbjct: 1   MLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGLS 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ R
Sbjct: 54  STLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLMLR 113

Query: 145 DRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL- 183
           D+L           +R F DN    +              + GF+SG  G+GGG      
Sbjct: 114 DKLKPLSLSNMTVIKRSFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGIGGGALLVPA 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +    + A ATS  +  L A  +    I            SLG V+    LI++P 
Sbjct: 174 MMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWIYALILIPG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   +   ++  +    +     + +      
Sbjct: 222 AWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 255



 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  +++
Sbjct: 146 LLAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAI 198

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +S   H   G ++       I    I   + + + + +  + +     I  +++G  ++
Sbjct: 199 VSSATHISLGNVSWIYALILIPGAWIGGKIGAYINTKLSGNAVINLLRITLIILGTRLI 257


>gi|255036372|ref|YP_003086993.1| hypothetical protein Dfer_2611 [Dyadobacter fermentans DSM 18053]
 gi|254949128|gb|ACT93828.1| protein of unknown function DUF81 [Dyadobacter fermentans DSM
           18053]
          Length = 392

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 106/270 (39%), Gaps = 22/270 (8%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           L +  ++  + +     ++  F++  + G  G+  G+      S     +G+  S  +  
Sbjct: 134 LTLLWNELEMSESFFYYVLGGFVAQMIDGALGMAYGVTA----STFLLTVGVPPS-AVSA 188

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF--LN 127
           ++ TS      TS +S   H + G +N K+ K  +F   +  +V +  +S ++K    + 
Sbjct: 189 SVHTSE---IFTSGVSGYMHLKFGNVNSKLFKKILFPGVLGAIVGAYALSSLEKYIYIIK 245

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
              AI+ L++GIL++++       K P   + ++  M  G L    G G G      ++ 
Sbjct: 246 PLVAIYTLVLGILIIQKALKKRVEKRPIKKIGWLA-MAGGTLDSIGGGGWGPIVTSTLIA 304

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
            G        +       ++  + +  I             +GF +   VL ++   ++ 
Sbjct: 305 RGRHPKYTIGSVNLAEFFVSLASSVTFISI-----------IGFSHWQVVLGLILGGMVS 353

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  LS  +  K + I    I+   S  
Sbjct: 354 APIAATLSRRLPIKTMMIMVGTIVIIVSLR 383


>gi|297571376|ref|YP_003697150.1| hypothetical protein Arch_0804 [Arcanobacterium haemolyticum DSM
           20595]
 gi|296931723|gb|ADH92531.1| protein of unknown function DUF81 [Arcanobacterium haemolyticum DSM
           20595]
          Length = 268

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 58/256 (22%), Positives = 97/256 (37%), Gaps = 23/256 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  I+V    +G LSGLFGVGGG+++VP L            +    A  TSL  I  T+
Sbjct: 12  ILTIVVIGGCAGFLSGLFGVGGGMIIVPALMIIL-------DMPQRQAAATSLCAIIITA 64

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               + +   G +++  +        I   +   ++  + +  L   F  F L + ++  
Sbjct: 65  ATGSIMYATQGNVSINAMLLVSLGALIGAQIGVWLLRILPEWLLPWIFVTFILSIIVIQQ 124

Query: 143 KRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATAT 198
             + L   R        +     G+V+G  +G +GVGGG      + L  GA    A  T
Sbjct: 125 FHEPLRASRIHVTALSAFGMIAVGVVSGIFAGLVGVGGGGIIVPGLELVVGAGDLIARGT 184

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S       A                   +  G V++   L +  I+  ITP+   ++  I
Sbjct: 185 SLLAMIPTALSGTFT------------SFRYGLVDLRVGLFVGAIASAITPVGMWVAQSI 232

Query: 259 GKKYLTIGFSMIMFTT 274
             +   I FS+ +   
Sbjct: 233 SPETGNILFSVFLVFV 248



 Score = 40.4 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 36/84 (42%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +A GTSL  + PT++       R+G +++++      +    T V   +   +     N 
Sbjct: 180 IARGTSLLAMIPTALSGTFTSFRYGLVDLRVGLFVGAIASAITPVGMWVAQSISPETGNI 239

Query: 129 AFAIFCLLMGILMLKRDRLYCERK 152
            F++F + + +  + + R    + 
Sbjct: 240 LFSVFLVFVCVSTVMKARRRMRKH 263


>gi|166368447|ref|YP_001660720.1| hypothetical protein MAE_57060 [Microcystis aeruginosa NIES-843]
 gi|166090820|dbj|BAG05528.1| hypothetical protein MAE_57060 [Microcystis aeruginosa NIES-843]
          Length = 252

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 102/266 (38%), Gaps = 26/266 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           + D   ++++    SG L+GLFG+GGG + V +L       G         ++ TS   I
Sbjct: 1   MADNYLILLITGVFSGLLAGLFGIGGGTISVAILLNLGYSYG--------ESVATSSLAI 52

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS+   +++ R G++  + +         T  +   ++ +  K  L  AF  F LL  
Sbjct: 53  VFTSLGGTIQNWRLGSLKWQRVLLLGLPGIFTAFIGVYLVKYSPKHLLEAAFGCFLLLNI 112

Query: 139 ILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLL-MLFYGASI 192
            L   +  L  +          N    + G + GFL+G  G+GGG     L M+F    I
Sbjct: 113 YLTNLKQNLSQKESVSAIRLHPNLACLLTGGIAGFLAGIFGIGGGAIMVPLQMIFLAEKI 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A  TS GV  L +  A      +            G +     +I+     L   + T
Sbjct: 173 KIAIVTSLGVVLLNSIAACFAHAQA------------GHILYLQGIILGIGGSLGVQVTT 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +    +  + + I F + +   +  F
Sbjct: 221 RFLPKLPDRLVRITFYIFLLLMAIYF 246



 Score = 43.9 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              ++   ++G L+G+FG+GGG +MVP+            +  + +A+ TSLGV+   S+
Sbjct: 136 LACLLTGGIAGFLAGIFGIGGGAIMVPLQMIFL-------AEKIKIAIVTSLGVVLLNSI 188

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   H + G I             +   VT+  +  +    +   F IF LLM I    
Sbjct: 189 AACFAHAQAGHILYLQGIILGIGGSLGVQVTTRFLPKLPDRLVRITFYIFLLLMAIYFFI 248

Query: 144 R 144
           R
Sbjct: 249 R 249


>gi|52081145|ref|YP_079936.1| membrane protein YrkJ [Bacillus licheniformis ATCC 14580]
 gi|52786525|ref|YP_092354.1| YrkJ [Bacillus licheniformis ATCC 14580]
 gi|319644890|ref|ZP_07999123.1| YrkJ protein [Bacillus sp. BT1B_CT2]
 gi|52004356|gb|AAU24298.1| conserved membrane protein YrkJ [Bacillus licheniformis ATCC 14580]
 gi|52349027|gb|AAU41661.1| YrkJ [Bacillus licheniformis ATCC 14580]
 gi|317392699|gb|EFV73493.1| YrkJ protein [Bacillus sp. BT1B_CT2]
          Length = 260

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 98/263 (37%), Gaps = 18/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +I LI    F+   +SG+ GVGG ++  P+L     L+G       H   G     + 
Sbjct: 3   ISFILLIFFIGFIGSFMSGMLGVGGAIINYPLLLYIPALLGFT-GFNAHQVSGIVAVQVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+ G +N +++      + + +++         +  +N  + +  ++  I
Sbjct: 62  IAAFSGVWAYRKDGYLNKELIFIMGLSILLGSLIGGYGSHFFSEDAINMVYGLLAIIAAI 121

Query: 140 LMLKRDRLYCERKFP----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYK 194
           +ML         +         +  I   V G  SG +G GG      LML         
Sbjct: 122 IMLIPKTGTEGNQSDHIRFPKILTSIMTFVVGLASGIVGAGGAFLLVPLMLVIIKIPARI 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             ATS  V+ + +      ++             +G V I   L+++  S++ +PL   +
Sbjct: 182 TIATSLAVTFISSIGTTATKLV------------IGQVPIMPALVVMAASLIASPLGVFI 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K L      ++F T+  
Sbjct: 230 GKKVNAKVLQGILIFVIFLTTVK 252



 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  + +F+ G  SG+ G GG  ++VP++    +       I   + + TSL V   +S+
Sbjct: 143 ILTSIMTFVVGLASGIVGAGGAFLLVPLMLVIIK-------IPARITIATSLAVTFISSI 195

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +       G + +      +    I + +   +   V+   L         L  + + 
Sbjct: 196 GTTATKLVIGQVPIMPALVVMAASLIASPLGVFIGKKVNAKVLQGILIFVIFLTTVKIW 254


>gi|229058186|ref|ZP_04196575.1| hypothetical protein bcere0026_13010 [Bacillus cereus AH603]
 gi|229132358|ref|ZP_04261212.1| hypothetical protein bcere0014_12940 [Bacillus cereus BDRD-ST196]
 gi|228651064|gb|EEL07045.1| hypothetical protein bcere0014_12940 [Bacillus cereus BDRD-ST196]
 gi|228720151|gb|EEL71733.1| hypothetical protein bcere0026_13010 [Bacillus cereus AH603]
          Length = 262

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 57/274 (20%), Positives = 112/274 (40%), Gaps = 40/274 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T + 
Sbjct: 1   MLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGLA 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ R
Sbjct: 54  STLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLILR 113

Query: 145 DRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL- 183
           D+L           +R F DN    +              + GF+SG  G+GGG      
Sbjct: 114 DKLKPLSLSNMTVIKRSFTDNEGNTVDYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPA 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +    + A ATS  +  L A  + L  I            SLG V+    LI++P 
Sbjct: 174 MMLLFAFPAHIAVATSMFIVFLSAIVSSLTHI------------SLGNVSWAYALILIPG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   +   ++  +    +     + +      
Sbjct: 222 AWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 255


>gi|229172189|ref|ZP_04299754.1| hypothetical protein bcere0006_13030 [Bacillus cereus MM3]
 gi|228611532|gb|EEK68789.1| hypothetical protein bcere0006_13030 [Bacillus cereus MM3]
          Length = 262

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 56/274 (20%), Positives = 111/274 (40%), Gaps = 40/274 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T + 
Sbjct: 1   MLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGLS 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ R
Sbjct: 54  STLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLMLR 113

Query: 145 DRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL- 183
           D+L           +R F DN    +              + GF+SG  G+GGG      
Sbjct: 114 DKLNPLSLSNMTVIKRSFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGIGGGALLVPA 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +    + A ATS  +  L A  +    I            SLG V+    LI++P 
Sbjct: 174 MMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWVYALILIPG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   +   ++  +    +     + +      
Sbjct: 222 AWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 255



 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  +++
Sbjct: 146 LLAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAI 198

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +S   H   G ++       I    I   + + + + +  + +     I  +++G  ++
Sbjct: 199 VSSATHISLGNVSWVYALILIPGAWIGGKIGAYINTKLSGNAVINLLRITLIILGTRLI 257


>gi|228920261|ref|ZP_04083609.1| hypothetical protein bthur0011_12770 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228951928|ref|ZP_04114026.1| hypothetical protein bthur0006_13420 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|229043292|ref|ZP_04191013.1| hypothetical protein bcere0027_13440 [Bacillus cereus AH676]
 gi|229109007|ref|ZP_04238608.1| hypothetical protein bcere0018_12800 [Bacillus cereus Rock1-15]
 gi|229126866|ref|ZP_04255878.1| hypothetical protein bcere0015_13230 [Bacillus cereus BDRD-Cer4]
 gi|229177959|ref|ZP_04305331.1| hypothetical protein bcere0005_13220 [Bacillus cereus 172560W]
 gi|229189632|ref|ZP_04316647.1| hypothetical protein bcere0002_13100 [Bacillus cereus ATCC 10876]
 gi|228593896|gb|EEK51700.1| hypothetical protein bcere0002_13100 [Bacillus cereus ATCC 10876]
 gi|228605447|gb|EEK62896.1| hypothetical protein bcere0005_13220 [Bacillus cereus 172560W]
 gi|228656806|gb|EEL12632.1| hypothetical protein bcere0015_13230 [Bacillus cereus BDRD-Cer4]
 gi|228674476|gb|EEL29719.1| hypothetical protein bcere0018_12800 [Bacillus cereus Rock1-15]
 gi|228726049|gb|EEL77285.1| hypothetical protein bcere0027_13440 [Bacillus cereus AH676]
 gi|228807851|gb|EEM54372.1| hypothetical protein bthur0006_13420 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228839460|gb|EEM84753.1| hypothetical protein bthur0011_12770 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 262

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 56/274 (20%), Positives = 111/274 (40%), Gaps = 40/274 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T + 
Sbjct: 1   MLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGLS 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ R
Sbjct: 54  STLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLMLR 113

Query: 145 DRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL- 183
           D+L           +R F DN    +              + GF+SG  G+GGG      
Sbjct: 114 DKLKPLSLSNTSVIKRSFTDNDGNTVHYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPA 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +    + A ATS  +  L A  +    I            SLG V+    LI++P 
Sbjct: 174 MMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWIYALILIPG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   +   ++  +    +     + +      
Sbjct: 222 AWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 255


>gi|110678948|ref|YP_681955.1| integral membrane protein, putative [Roseobacter denitrificans OCh
           114]
 gi|109455064|gb|ABG31269.1| integral membrane protein, putative [Roseobacter denitrificans OCh
           114]
          Length = 312

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 97/277 (35%), Gaps = 53/277 (19%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG +M P+L       GI  +    VA+ T    I  +S    + H +  T++
Sbjct: 36  SGMFGVGGGFLMTPLLFFI----GIPPA----VAVATEANQIVASSFSGVLAHLKRKTVD 87

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFCLLMGILML--------- 142
           +K+    +        V  ++ +++         +   + +F  ++G LM          
Sbjct: 88  LKMGTVLLIGGLAGAAVGVVIFNYLKAQGQVDLLVKLCYVVFLGVIGGLMFIESLNAIRN 147

Query: 143 -------------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
                               + R      +       I G+  G L+  +GVGGG     
Sbjct: 148 TKKGKPPARKKHNWIHGLPFKMRFRVSGLYISVIPPLIVGLCVGILAAIMGVGGGFIMVP 207

Query: 184 LMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            M++  G        TS      +     L+   + +            V+I   +++L 
Sbjct: 208 AMIYLLGMPTKVVVGTSLFQIIFVTAFTTLLHATTNFT-----------VDIVLAVLLLI 256

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             ++   + T++   +  + L I  ++++       A
Sbjct: 257 GGVIGAQVGTRIGVKLKAEQLRILLAIMVLAVCGKLA 293


>gi|108802274|ref|YP_642471.1| hypothetical protein Mmcs_5314 [Mycobacterium sp. MCS]
 gi|119871427|ref|YP_941379.1| hypothetical protein Mkms_5403 [Mycobacterium sp. KMS]
 gi|108772693|gb|ABG11415.1| protein of unknown function DUF81 [Mycobacterium sp. MCS]
 gi|119697516|gb|ABL94589.1| protein of unknown function DUF81 [Mycobacterium sp. KMS]
          Length = 291

 Score = 78.6 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 94/260 (36%), Gaps = 23/260 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L I  +   G   GL G GG ++ VP+L+           +    A+ TSL V+  T
Sbjct: 1   MIGLTIGLAVFVGIALGLLGGGGSILTVPLLAYV-------AGMDAKQAIATSLLVVGVT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S +  + H R G +  +    +            L+   +  + L   FA+  +   + M
Sbjct: 54  SAIGAISHARAGRVQWRTGLIFGAAGMAGAYGGGLLARFIPGTVLLIGFAVMMVATAVAM 113

Query: 142 LKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATA 197
           L+  +                   G+V G ++G +G GGG      +    G  +  A  
Sbjct: 114 LRGRKNVETAGGAHRLPVPKIIAEGLVVGLVTGLVGAGGGFLVVPALALLGGLPMPIAVG 173

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS  V A+ +F  L   + S              ++    L +   +++   +  +L+ M
Sbjct: 174 TSLIVIAMKSFAGLGGYLSSVQ------------IDWSVALAVTGAAVVGALVGARLTAM 221

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           +    L   F   +   S+V
Sbjct: 222 VNPDSLRKAFGWFVLAMSWV 241



 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 7/120 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II    + G ++GL G GGG ++VP L+           + M +A+GTSL VIA  S   
Sbjct: 134 IIAEGLVVGLVTGLVGAGGGFLVVPALALL-------GGLPMPIAVGTSLIVIAMKSFAG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +     I+  +         +  +V + + + V+   L KAF  F L M  ++L ++
Sbjct: 187 LGGYLSSVQIDWSVALAVTGAAVVGALVGARLTAMVNPDSLRKAFGWFVLAMSWVILGQE 246


>gi|154149849|ref|YP_001403467.1| hypothetical protein Mboo_0302 [Candidatus Methanoregula boonei
           6A8]
 gi|153998401|gb|ABS54824.1| protein of unknown function DUF81 [Methanoregula boonei 6A8]
          Length = 269

 Score = 78.6 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 105/281 (37%), Gaps = 41/281 (14%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +V     +I      G ++ + G+GGG + VP L+  F   G D      +A+GTSL V
Sbjct: 1   MIVSLAAFLISCGI--GVIAAVIGLGGGFLYVPTLTLIF---GFDP----RIAVGTSLAV 51

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +  +S  + + +RR G +  K            +++ S++ S++D   +   FA+  L M
Sbjct: 52  MVFSSFAATVVYRRQGRVLYKAAAVIAIPSIAFSMLASVISSYIDTRLIIALFALALLAM 111

Query: 138 GILMLKRDRLYCERKFPDNYV--------------------KYIWGMVTGFLSGALGVGG 177
              ML        +      +                      +WG   GF+SG  G  G
Sbjct: 112 SFEMLIPALHLIRKIGIGPLMALSCRDLDGTEKIIQIPYAHLVVWGAFGGFVSGVTGTSG 171

Query: 178 GIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
           G +    ++  G  ++ A ATS             V  +            LG V++  +
Sbjct: 172 GAYFVPALVALGVPVHWAVATSLLAVIPTVVTGASVHAF------------LGHVSVPFL 219

Query: 238 LIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++    + +   L   ++  I   ++   F +++   + + 
Sbjct: 220 VLYGAGAGMGACLGAYIAPRIHPDHIRKFFGVMLIFIAVLM 260



 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 8/120 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++V     G +SG+ G  GG   VP L            + +H A+ TSL  + PT V  
Sbjct: 153 LVVWGAFGGFVSGVTGTSGGAYFVPALVAL--------GVPVHWAVATSLLAVIPTVVTG 204

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H   G +++  L  +     +   + + +   +    + K F +  + + +LM+++ 
Sbjct: 205 ASVHAFLGHVSVPFLVLYGAGAGMGACLGAYIAPRIHPDHIRKFFGVMLIFIAVLMIQQK 264


>gi|229028580|ref|ZP_04184696.1| hypothetical protein bcere0028_6940 [Bacillus cereus AH1271]
 gi|228732701|gb|EEL83567.1| hypothetical protein bcere0028_6940 [Bacillus cereus AH1271]
          Length = 254

 Score = 78.6 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 101/260 (38%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      +   + + S   + +++  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKTLVVYMGASILAGSFIGSFGANVLEEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R   ++   + ++      + G  SG +G GG      +ML      I    AT
Sbjct: 120 MMFVPKRNIGDKVKYNKWLASSLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRTTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LII   SI   PL  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVVIPALIIAIASIFAAPLGARVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAVKM 247


>gi|229084550|ref|ZP_04216821.1| hypothetical protein bcere0022_11850 [Bacillus cereus Rock3-44]
 gi|228698753|gb|EEL51467.1| hypothetical protein bcere0022_11850 [Bacillus cereus Rock3-44]
          Length = 262

 Score = 78.6 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 108/274 (39%), Gaps = 40/274 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T + 
Sbjct: 1   MLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSIVTVVFTGLS 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ R
Sbjct: 54  STLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDSFSLYFGIFLIFVSILLMLR 113

Query: 145 DRLYC--------------------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL- 183
           D+L                             ++  I   V GF+SG  G+GGG      
Sbjct: 114 DKLKPLSLSNATVIKRSFTDAEGNTVHYQFPPFLSIIIAFVVGFISGLFGIGGGALLVPA 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +      A ATS  +  L A  + L  I            SLG V+    L+++P 
Sbjct: 174 MMLLFAFPAQIAVATSMFIVFLSAIVSSLTHI------------SLGNVSWVYALVLIPG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   +   ++  +    +     + +      
Sbjct: 222 AWIGGKIGAYINTKLSGNAIINLLRITLMILGTR 255


>gi|23466070|ref|NP_696673.1| hypothetical protein BL1515 [Bifidobacterium longum NCC2705]
 gi|23326796|gb|AAN25309.1| widely conserved hypothetical transmembrane protein with dub81
           [Bifidobacterium longum NCC2705]
          Length = 284

 Score = 78.6 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 94/242 (38%), Gaps = 24/242 (9%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
           FG+GGG ++VP L            +    A  TS+  I PTSV   + +   G ++   
Sbjct: 52  FGIGGGTIIVPALVWL--------GLTQRHAAATSMLAIVPTSVSGVLAYAVEGNVDWIA 103

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG---ILMLKRDRLYCERKFPDN 156
                  + I   + SL++S + +  L  AF +F   +    ++ +       E      
Sbjct: 104 ALLMFLGMFIGGQIGSLLLSRLPEVVLRWAFVVFMAFIIASQLIFIPSRDSSIEFNLVTV 163

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRI 215
            +  ++G++ G L+G LGVGGG      + + +GAS   A  TS       A    +  +
Sbjct: 164 LLMIVFGVLAGILAGLLGVGGGAICVPALSILFGASDLIARGTSLLSMFPNAMTTTVANV 223

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                           V+  A LII  ++ L  PL T ++  +  +   I F+  +    
Sbjct: 224 RRKM------------VHAKAGLIIGIVAALTAPLGTWIAGAMSPRAGGILFATYLTVLL 271

Query: 276 FV 277
             
Sbjct: 272 IR 273


>gi|126438256|ref|YP_001073947.1| hypothetical protein Mjls_5693 [Mycobacterium sp. JLS]
 gi|126238056|gb|ABO01457.1| protein of unknown function DUF81 [Mycobacterium sp. JLS]
          Length = 291

 Score = 78.6 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 93/260 (35%), Gaps = 23/260 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L I  +   G   GL G GG ++ VP+L+           +    A+ TSL V+  T
Sbjct: 1   MIGLTIGLAVFVGIALGLLGGGGSILTVPLLAYV-------AGMDAKQAIATSLLVVGVT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S +  + H R G +  +    +            L+   +  + L   FA+  +   + M
Sbjct: 54  SAIGAISHARAGRVQWRTGLIFGAAGMAGAYGGGLLARFIPGTVLLIGFAVMMVATAVAM 113

Query: 142 LKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATA 197
           L+  +                   G+V G ++G +G GGG      +    G  +  A  
Sbjct: 114 LRGRKNVETAGGAHRLPVPKIIAEGLVVGLVTGLVGAGGGFLVVPALALLGGLPMPIAVG 173

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS  V A+ +F  L   + S              ++    L +   +++   +  +L+ M
Sbjct: 174 TSLIVIAMKSFAGLGGYLSSVQ------------IDWSVALAVTGAAVVGALVGARLTAM 221

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           +    L   F   +   S V
Sbjct: 222 VNPDSLRKAFGWFVLAMSSV 241



 Score = 62.0 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 7/120 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II    + G ++GL G GGG ++VP L+           + M +A+GTSL VIA  S   
Sbjct: 134 IIAEGLVVGLVTGLVGAGGGFLVVPALALL-------GGLPMPIAVGTSLIVIAMKSFAG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +     I+  +         +  +V + + + V+   L KAF  F L M  ++L ++
Sbjct: 187 LGGYLSSVQIDWSVALAVTGAAVVGALVGARLTAMVNPDSLRKAFGWFVLAMSSVILGQE 246


>gi|84685127|ref|ZP_01013026.1| membrane protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84666859|gb|EAQ13330.1| membrane protein [Rhodobacterales bacterium HTCC2654]
          Length = 304

 Score = 78.6 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/306 (18%), Positives = 110/306 (35%), Gaps = 53/306 (17%)

Query: 8   FSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
            ++ ++L    V     L++    L G LSG+FGVGGG +M P+L       GI  +   
Sbjct: 1   MNMQIYLPIAEVSVNAFLLLGLGGLVGVLSGMFGVGGGFLMTPLLFMI----GIPPA--- 53

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK---- 123
            VA+ T    I  +SV   + H +  T+++K+    +    +       + +++      
Sbjct: 54  -VAVATGTNQIVASSVSGVLAHLKRKTVDLKMGCVLLSGGLVGAAAGVQLFAYLRSIGQV 112

Query: 124 -SFLNKAFAIFCLLMGILML----------------KRDRLYCERKFP------------ 154
              +  ++ +F  ++G LML                KR +       P            
Sbjct: 113 DLLVTLSYVVFLGIIGTLMLIESVGALMRSRRMAAPKRKKHNWVHNLPIKSKFRTSGLYI 172

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLV 213
                 + G   G LS  +GVGGG      M++  G        TS      +A    L+
Sbjct: 173 SVIPPVLVGFGVGVLSAIMGVGGGFIMVPAMIYILGMPTKVVVGTSLFQIIFVAAFTTLM 232

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
             +               V+IG  ++++   ++   +  ++   I  +   I  ++++  
Sbjct: 233 HAWENHT-----------VDIGLAVLLIVGGVIGAQVGARIGLRIKAEQTRILLALLVVG 281

Query: 274 TSFVFA 279
                A
Sbjct: 282 VCLNLA 287


>gi|310815340|ref|YP_003963304.1| integral membrane protein, putative [Ketogulonicigenium vulgare
           Y25]
 gi|308754075|gb|ADO42004.1| integral membrane protein, putative [Ketogulonicigenium vulgare
           Y25]
          Length = 304

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 90/276 (32%), Gaps = 53/276 (19%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I    ++ G LSG+FGVGGG ++ P+L            I   VA+ T+   I  +SV
Sbjct: 15  LWIFGLGWIVGILSGMFGVGGGFLITPLLIF--------SGIPSAVAVATATNQIVASSV 66

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH------------VDKSFLNKAFA 131
                H R   +++++    +    +   +   + +             +    L     
Sbjct: 67  SGLFAHLRRKNVDLRMGTVLMIGGLVGAAIGVGIFNWMRRMGQVDLMITLSYVILLGTIG 126

Query: 132 IFCLLMGILMLKRDRLYCERKFPDNYV---------------------KYIWGMVTGFLS 170
              L+ G   L R R         +                         + G   G LS
Sbjct: 127 AMMLVEGTRALLRQRSGVVPARKRHNWVHNLPLKMKFRVSGLYISVIPPLLVGTGVGVLS 186

Query: 171 GALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G +GVGGG      M++  G        TS      +     ++   + +          
Sbjct: 187 GIMGVGGGFIMVPAMIYLLGMPTKVVVGTSLFQIIFVTAFTTMLHATTNYT--------- 237

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
             V+I   L+++   ++   + T++   +  + L I
Sbjct: 238 --VDILLGLMLILGGVVGAQIGTRIGMRLRAEQLRI 271



 Score = 42.4 bits (99), Expect = 0.077,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 25/61 (40%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
           D    +  G + G LSG  GVGGG     L++F G     A AT+       +   L   
Sbjct: 13  DALWIFGLGWIVGILSGMFGVGGGFLITPLLIFSGIPSAVAVATATNQIVASSVSGLFAH 72

Query: 215 I 215
           +
Sbjct: 73  L 73


>gi|229138241|ref|ZP_04266837.1| hypothetical protein bcere0013_13630 [Bacillus cereus BDRD-ST26]
 gi|228645273|gb|EEL01509.1| hypothetical protein bcere0013_13630 [Bacillus cereus BDRD-ST26]
          Length = 262

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 56/274 (20%), Positives = 110/274 (40%), Gaps = 40/274 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T + 
Sbjct: 1   MLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGLS 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +H  ++ K             ++ S     + +   +  F IF + + IL++ R
Sbjct: 54  STLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLKQDTFSLYFGIFLIFVSILLMLR 113

Query: 145 DRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL- 183
           D+L           +R F DN    +              + GF+SG  G+GGG      
Sbjct: 114 DKLKPLSLSNMTVIKRSFTDNEGNTVHYQFPPLLAIFIAFIVGFISGLFGIGGGALLVPA 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +    + A ATS  +  L A  +    I            SLG V+    LI++P 
Sbjct: 174 MMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWIYALILIPG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   +   ++  +    +     + +      
Sbjct: 222 AWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 255



 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  +++
Sbjct: 146 LLAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAI 198

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +S   H   G ++       I    I   + + + + +  + +     I  +++G  ++
Sbjct: 199 VSSATHISLGNVSWIYALILIPGAWIGGKIGAYINTKLSGNAVINLLRITLIILGTRLI 257


>gi|322831936|ref|YP_004211963.1| hypothetical protein Rahaq_1213 [Rahnella sp. Y9602]
 gi|321167137|gb|ADW72836.1| protein of unknown function DUF81 [Rahnella sp. Y9602]
          Length = 266

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 91/236 (38%), Gaps = 25/236 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++   +  +G +  + G GGGL+ +P L       G+  +     A+ T+       S
Sbjct: 11  LVVLFFVALFAGFIDSIAG-GGGLISLPALL----AAGVSPAQ----AIATNKLSSIGGS 61

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + +   R G +++   K  I      +V+ +++I H+    L +   +  + +G+  L
Sbjct: 62  FSASLYFVRRGVVDLNDQKLNIACTFTGSVIGAILIQHLRADILRQVLPLLIICIGLYFL 121

Query: 143 KRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
              RL      R+        + G   GF  G  G G G F  L  +   G ++ KATA 
Sbjct: 122 LTPRLGESDRARRLNALPYALVGGGCVGFYDGFFGPGAGSFYALAFVTLCGFNLAKATAH 181

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           +  ++       L+  I  G  +     W LGFV       +     +   L  ++
Sbjct: 182 AKVLNFTSNLGGLIFFILGGKVI-----WVLGFV-------MAAGQFIGARLGARM 225


>gi|325959155|ref|YP_004290621.1| hypothetical protein Metbo_1410 [Methanobacterium sp. AL-21]
 gi|325330587|gb|ADZ09649.1| protein of unknown function DUF81 [Methanobacterium sp. AL-21]
          Length = 263

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 102/260 (39%), Gaps = 33/260 (12%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G L  +FG GGG + VPVL   F        +   VA+ TSL  + PTSV+S + H R G
Sbjct: 17  GLLVSMFGGGGGGLYVPVLILIF-------GVTPQVAIATSLASVLPTSVVSSISHFREG 69

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR--------- 144
            ++++          + T+V +++ + +    L K   IF L+M I ML+          
Sbjct: 70  NVDIRTGLILGIGGVVGTLVGAVIANLIPPVLLEKIMGIFTLIMLIPMLRSLVQRQQKMK 129

Query: 145 -----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
                ++     K P   V  ++G+ +G L+G  G+ G       +   G        TS
Sbjct: 130 ELNGENQEKTTLKGPKRAVASLFGVASGLLAGVFGISGTPPIIAGLYSLGLPALMVVGTS 189

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             V    +   +               + LG +N+  ++++   + +   +   L   I 
Sbjct: 190 VFVLIFNSLAGIGGF------------YLLGRLNLTLIILLGGSAAVGAFIGPLLLKKIN 237

Query: 260 KKYLTIGFSMIMFTTSFVFA 279
                  +  ++  T  +FA
Sbjct: 238 PNTFEKIYGPVIMGTMIIFA 257


>gi|49185865|ref|YP_029118.1| hypothetical protein BAS2859 [Bacillus anthracis str. Sterne]
 gi|49179792|gb|AAT55168.1| membrane protein, putative [Bacillus anthracis str. Sterne]
          Length = 399

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 92/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A  
Sbjct: 93  TITGGFFMQKLIVFAIIGFSAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE- 150

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   V +  +S++    +    ++
Sbjct: 151 ------VVTTAASGASHLKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISL 204

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R     ++    K          G+  GF+    G G G  T  ++L  
Sbjct: 205 FLFTLGVYILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLAR 264

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       +A  A +    S GW            V+   V  ++   I+ 
Sbjct: 265 GNEARKVIGSVDTSEFPVALAATIGFFISLGWEQ----------VSWFWVFALMLGGIVA 314

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  ++    L +    ++  T+  
Sbjct: 315 APIAAWLVRIVPSHLLGVLVGGLIIFTNIR 344


>gi|26988592|ref|NP_744017.1| hypothetical protein PP_1862 [Pseudomonas putida KT2440]
 gi|24983366|gb|AAN67481.1|AE016374_13 conserved hypothetical protein [Pseudomonas putida KT2440]
          Length = 249

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 83/230 (36%), Gaps = 17/230 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I  +          +   + 
Sbjct: 29  AIPALGVLFGLDQQLAQGTALVMVVPNVLLALWRYHQRNRIAFRHALPLSACSFLFAWLG 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMG----ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           S+    +D  F+   F  F + +     + M  +                + G   G + 
Sbjct: 89  SIWAVGLDAHFMRLGFVGFLVALAVWNVVRMFMKVSPPSAELRHAWPWLGVLGSFAGTMG 148

Query: 171 GALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G  GVGG +    ++   +GA+   A   S  ++A      L+       G++    W +
Sbjct: 149 GLFGVGGAVVATPILTSVFGATQVVAQGLSLALAAPSTLVTLVTY-----GVHHSVDWGV 203

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           G       + +    +L      KL++ + +K L   F + +   + + A
Sbjct: 204 G-------IPLAVGGLLSISWGVKLAHALPEKVLRAMFCVFLVVCAVMLA 246



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 7/119 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            + V    +GT+ GLFGVGG +V  P+L+  F    +       VA G SL + AP++++
Sbjct: 136 WLGVLGSFAGTMGGLFGVGGAVVATPILTSVFGATQV-------VAQGLSLALAAPSTLV 188

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + + +  H +++  +         ++      +   + +  L   F +F ++  +++  
Sbjct: 189 TLVTYGVHHSVDWGVGIPLAVGGLLSISWGVKLAHALPEKVLRAMFCVFLVVCAVMLAF 247


>gi|220918686|ref|YP_002493990.1| protein of unknown function DUF81 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956540|gb|ACL66924.1| protein of unknown function DUF81 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 255

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 88/262 (33%), Gaps = 26/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+      +GTL  L G+GGG+++VP+L+  F        +    A+  SL VI  +S 
Sbjct: 4   LLLASVGLGAGTLGALMGIGGGIIVVPILTAGF-------GLPFRHAVAVSLVVIIASSS 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   +      +M++            ++ S +        L   FA   +   ++M +
Sbjct: 57  SAAASYVDRKLSDMRVGVVLELATVAGAMLGSAVAGLAPVGLLKALFAAVAVYSALVMWR 116

Query: 144 RDRLYCERKFPDNYVKYIWGM------VTGFLSGALGVGGGIFTNLLMLFYG-ASIYKAT 196
           R          + YV   WG       V G +SG +GVGGG     +M          A 
Sbjct: 117 RRPAGPPAAEGEPYVVRRWGTGLGASAVAGAISGLIGVGGGFIKVPVMTLAMELPFKVAV 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           ATS  +  + A  +  V    G     +               ++        L   L  
Sbjct: 177 ATSNFMIGVTAAASAYVYYARGDLEVAV------------AAPVVVGVFAGARLGATLLG 224

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            I    L   FS ++       
Sbjct: 225 RIPAARLQAAFSALLVLLGGRM 246



 Score = 37.4 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 13/125 (10%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLV 213
              +    G+  G L   +G+GGGI    ++   +G     A A S  V    +  A   
Sbjct: 2   TALLLASVGLGAGTLGALMGIGGGIIVVPILTAGFGLPFRHAVAVSLVVIIASSSSAAAS 61

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            +        L    +G       +++   ++    L + ++ +     L   F+ +   
Sbjct: 62  YV-----DRKLSDMRVG-------VVLELATVAGAMLGSAVAGLAPVGLLKALFAAVAVY 109

Query: 274 TSFVF 278
           ++ V 
Sbjct: 110 SALVM 114


>gi|145641910|ref|ZP_01797484.1| thymidylate synthase [Haemophilus influenzae R3021]
 gi|145273389|gb|EDK13261.1| thymidylate synthase [Haemophilus influenzae 22.4-21]
          Length = 112

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 44/110 (40%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L     ++ + +S+ M  A+GTS   I  T + S   H + G I  + ++    V+ +
Sbjct: 2   PTLVYLLPIVDVPESLLMSTALGTSFATIVITGIGSAQRHHKLGNIVWQAVRILAPVIML 61

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK 159
           +  +  L I  +D+    K FA   + +   M+   +       P     
Sbjct: 62  SVFICGLFIGRLDREISAKIFACLVVYLATKMVLSIKKDQVTTKPLTPFL 111


>gi|229023011|ref|ZP_04179528.1| hypothetical protein bcere0029_13560 [Bacillus cereus AH1272]
 gi|228738317|gb|EEL88796.1| hypothetical protein bcere0029_13560 [Bacillus cereus AH1272]
          Length = 262

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/274 (20%), Positives = 112/274 (40%), Gaps = 40/274 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T + 
Sbjct: 1   MLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGLA 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ R
Sbjct: 54  STLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLILR 113

Query: 145 DRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL- 183
           D+L           +R F DN    +              + GF+SG  G+GGG      
Sbjct: 114 DKLKPLSLSNMTVIKRSFTDNEGNTVDYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPA 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +    + A ATS  +  L A  + L  I            SLG V+    LI++P 
Sbjct: 174 MMLLFAFPAHIAVATSMFIVFLSAIVSSLTHI------------SLGNVSWAYALILIPG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   +   ++  +    +     + +      
Sbjct: 222 AWVGGKIGAYINTKLSGNAVINLLRITLIILGTR 255


>gi|229159859|ref|ZP_04287866.1| hypothetical protein bcere0009_6600 [Bacillus cereus R309803]
 gi|228623598|gb|EEK80417.1| hypothetical protein bcere0009_6600 [Bacillus cereus R309803]
          Length = 254

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 102/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R++  ++  ++      + I + + S   + +++  +N  + +   +  +
Sbjct: 60  FATFAGAWAYRKNKDMDKTLVVYMGASILIGSFIGSFGANVLEEHTVNVVYTLLATIAAV 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    +        + ++  +   + G  SG +G GG      +ML      I    AT
Sbjct: 120 MMFIPKKNNSGVVKYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRMTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  V+ + +      ++ +G             V +   LII   SI   PL  ++   +
Sbjct: 180 SIAVTFISSIGITTGKVMTGQ------------VVMIPALIIAIASIFAAPLGARVGKRM 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKVLQYMLSILIVGTAVKM 247


>gi|315646542|ref|ZP_07899660.1| hypothetical protein PVOR_14159 [Paenibacillus vortex V453]
 gi|315278185|gb|EFU41505.1| hypothetical protein PVOR_14159 [Paenibacillus vortex V453]
          Length = 260

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 107/261 (40%), Gaps = 18/261 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I  I    F+   +SG+ G+GG ++  P+L     L G+  +   H   G S   +   
Sbjct: 7   FITTIFFIGFIGSFISGMVGIGGSIIKYPMLLYIPPLFGL-AAFTAHEVSGISAVQVFFA 65

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++     +R+ G +N  ++      + + + +     + + +  +N  + I  L+  ++M
Sbjct: 66  TIGGVWAYRKGGYLNKTLIIYMGSAILLGSFLGGFGSNMMSEDGINLIYGILALIAAVMM 125

Query: 142 LKRDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
              ++    +  ++   + ++  +  ++ G  +G +G  G      +ML           
Sbjct: 126 FIPNKGVDDISLDQVTFNKWLAAVLALIVGIGAGIVGAAGAFLLVPIMLVVLKIPTRMTI 185

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           ATS  ++ + +  + + ++ +G               + A++ ++  S++ +PL      
Sbjct: 186 ATSLAITFISSIGSAIGKLTTGQVD-----------YVPALI-MVIASLIASPLGASAGK 233

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            +  K L I  ++++  T+  
Sbjct: 234 KMNTKVLQIILAVLILATAIK 254



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 35/99 (35%), Gaps = 7/99 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            ++VP++    +       I   + + TSL +   +S+ S +     G ++       + 
Sbjct: 167 FLLVPIMLVVLK-------IPTRMTIATSLAITFISSIGSAIGKLTTGQVDYVPALIMVI 219

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              I + + +     ++   L    A+  L   I +   
Sbjct: 220 ASLIASPLGASAGKKMNTKVLQIILAVLILATAIKIWLD 258


>gi|260907021|ref|ZP_05915343.1| integral membrane protein [Brevibacterium linens BL2]
          Length = 265

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/215 (23%), Positives = 91/215 (42%), Gaps = 14/215 (6%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
           FG GGG V VP+++     +G D +    VA  TS  V+   +V+S +  +R    ++K 
Sbjct: 20  FGFGGGFVTVPIITLVHADLGSDTA---RVAAATSALVMLVNAVVSTLSTKRETLAHLKG 76

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP----- 154
                 +L       +       +  L   F I+  +  I +L R   +           
Sbjct: 77  EWWLFILLAAGGAFGAFCAKFAPEPLLKWGFVIYIAVTAIDLLARPGFFRRGGAKVRDEN 136

Query: 155 ----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPA 210
                  +  ++G   G L+  LGVGG + T  +M   G+++  AT  +  ++ +I  PA
Sbjct: 137 LSDGGRGIAALFGFPIGGLASFLGVGGSVMTVPMMRRSGSTMTVATTLANPLTLVIMLPA 196

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           +LV I +    +   P  +G V++ +   +L  +I
Sbjct: 197 VLVTITT--HASTAVPGMVGSVDLRSAFALLISAI 229


>gi|118472709|ref|YP_889628.1| hypothetical protein MSMEG_5387 [Mycobacterium smegmatis str. MC2
           155]
 gi|118173996|gb|ABK74892.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 290

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 56/259 (21%), Positives = 93/259 (35%), Gaps = 22/259 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L IV +   G   G+ G GG ++ VP+L+           +    A+ TSL V+  T
Sbjct: 1   MIALTIVLAVFVGIALGMLGGGGSILTVPLLAYV-------AGMDAKQAVTTSLLVVGVT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S +S + H R G +  +    +            ++   +  + L  AFA+  +   I M
Sbjct: 54  SAVSAVSHARAGRVQWRAGLSFGAAGMAGAYAGGVLGRFIPGTALLIAFAVVMVAAAIPM 113

Query: 142 LKRDRLYCERKFPDNYVKYIW--GMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATAT 198
           L+  R           V  +   G+  G L+G +G GGG      +    G  +  A  T
Sbjct: 114 LRGRRAPEATTAHGLPVVRVVSLGLAVGGLTGMIGAGGGFLVVPALTLLGGLPMPAAVGT 173

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  V AL +F  L   +                ++      +   ++    + T+L   I
Sbjct: 174 SLIVIALNSFSGLAGHLTGLQ------------IDWALAAAVTGAAVAGCLIGTRLITKI 221

Query: 259 GKKYLTIGFSMIMFTTSFV 277
               L   F   +   S V
Sbjct: 222 NADALRKAFGWFVLAMSSV 240



 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 7/123 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++      G L+G+ G GGG ++VP L+           + M  A+GTSL VIA  S
Sbjct: 130 VVRVVSLGLAVGGLTGMIGAGGGFLVVPALTLL-------GGLPMPAAVGTSLIVIALNS 182

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                 H     I+  +            ++ + +I+ ++   L KAF  F L M  ++L
Sbjct: 183 FSGLAGHLTGLQIDWALAAAVTGAAVAGCLIGTRLITKINADALRKAFGWFVLAMSSVIL 242

Query: 143 KRD 145
            ++
Sbjct: 243 AQE 245


>gi|228900131|ref|ZP_04064364.1| hypothetical protein bthur0014_13380 [Bacillus thuringiensis IBL
           4222]
 gi|228907182|ref|ZP_04071044.1| hypothetical protein bthur0013_13530 [Bacillus thuringiensis IBL
           200]
 gi|228964521|ref|ZP_04125633.1| hypothetical protein bthur0004_13680 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228795223|gb|EEM42717.1| hypothetical protein bthur0004_13680 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228852514|gb|EEM97306.1| hypothetical protein bthur0013_13530 [Bacillus thuringiensis IBL
           200]
 gi|228859537|gb|EEN03964.1| hypothetical protein bthur0014_13380 [Bacillus thuringiensis IBL
           4222]
          Length = 262

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 56/274 (20%), Positives = 111/274 (40%), Gaps = 40/274 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T + 
Sbjct: 1   MLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGLS 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ R
Sbjct: 54  STLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLMLR 113

Query: 145 DRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL- 183
           D+L           +R F DN    +              + GF+SG  G+GGG      
Sbjct: 114 DKLKPLSLSNTSVIKRSFTDNDGNAVHYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPA 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +    + A ATS  +  L A  +    I            SLG V+    LI++P 
Sbjct: 174 MMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWIYALILIPG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   +   ++  +    +     + +      
Sbjct: 222 AWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 255


>gi|171741794|ref|ZP_02917601.1| hypothetical protein BIFDEN_00889 [Bifidobacterium dentium ATCC
           27678]
 gi|283457004|ref|YP_003361568.1| hypothetical protein BDP_2187 [Bifidobacterium dentium Bd1]
 gi|171277408|gb|EDT45069.1| hypothetical protein BIFDEN_00889 [Bifidobacterium dentium ATCC
           27678]
 gi|283103638|gb|ADB10744.1| Conserved hypothetical membrane spanning protein with DUF81 domain
           [Bifidobacterium dentium Bd1]
          Length = 304

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 95/253 (37%), Gaps = 24/253 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++++   + G LSG+FG+GGG V+VP L            +    A  TS+  I PTS
Sbjct: 49  MMVLVIVGMIVGLLSGMFGIGGGTVIVPALVWL--------GLSQRHAAATSMLAIVPTS 100

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG---- 138
           +   + +  +G ++          +       S ++S + +  L   F +F + +     
Sbjct: 101 ISGVISYAHNGNVDWVAAVLLFVGMFAGGQFGSWLLSRLPELVLRWVFVVFLVFVTVNQV 160

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           I    RD+           +  +  ++          GG +    L + +GAS   A  T
Sbjct: 161 IFTPSRDQRISMSVATGVGLVLLGVVIGTLAGLLGIGGGALAVPALSILFGASDLIARGT 220

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S       +    +  +                V+I A LII  I+ L TP  T ++  +
Sbjct: 221 SLLAMFPNSITTSVANMKRKL------------VHIKAGLIIGVIAALTTPFGTWVAGAV 268

Query: 259 GKKYLTIGFSMIM 271
             +   I F+  +
Sbjct: 269 SPRAGAIMFAAYL 281



 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 43/127 (33%), Gaps = 12/127 (9%)

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
              +   +    +       V  I GM+ G LSG  G+GGG      +++ G S   A A
Sbjct: 31  ADRLFGPNPSGLDESPHGMMVLVIVGMIVGLLSGMFGIGGGTVIVPALVWLGLSQRHAAA 90

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS       +   ++   ++            G V+  A +++           + L   
Sbjct: 91  TSMLAIVPTSISGVISYAHN------------GNVDWVAAVLLFVGMFAGGQFGSWLLSR 138

Query: 258 IGKKYLT 264
           + +  L 
Sbjct: 139 LPELVLR 145



 Score = 40.4 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 7/95 (7%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP LS  F    +       +A GTSL  + P S+ + + + +   +++K       +  
Sbjct: 203 VPALSILFGASDL-------IARGTSLLAMFPNSITTSVANMKRKLVHIKAGLIIGVIAA 255

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +TT   + +   V        FA +  ++ +    
Sbjct: 256 LTTPFGTWVAGAVSPRAGAIMFAAYLCVLLVRSFF 290


>gi|261406167|ref|YP_003242408.1| hypothetical protein GYMC10_2322 [Paenibacillus sp. Y412MC10]
 gi|261282630|gb|ACX64601.1| protein of unknown function DUF81 [Paenibacillus sp. Y412MC10]
          Length = 260

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 104/266 (39%), Gaps = 18/266 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  + +I  I +  F+   +SG+ G+GG ++  P+L     L G+  +   H   G S  
Sbjct: 2   ELSISFIITIFLIGFIGSYISGMVGIGGSIIKYPMLLYIPPLFGL-AAFTAHEVSGISAV 60

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   ++     +R+ G +N  ++      + + + +       + +  +N  + I  L+
Sbjct: 61  QVFFATIGGVWAYRKGGYLNKTLIIYMGSAILLGSFIGGFGSKMMSEGGINLIYGILALI 120

Query: 137 MGILMLKRDR-----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
             ++M   ++        + KF       +  +V          G  +   ++++     
Sbjct: 121 AAVMMFIPNKGVDDIPLDQVKFNKWLAAALALVVGIGAGIVGAAGAFLLVPIMLVVLKIP 180

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
                ATS  ++ + +  + + ++ +G               I A++ ++  S++ +PL 
Sbjct: 181 TRMTIATSLAITFISSIGSTVGKLTTGQVD-----------YIPALI-MVVASLIASPLG 228

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
                 +  K+L I  ++++  T+  
Sbjct: 229 AAAGKKMNTKFLQIILAVLILATAIK 254



 Score = 37.4 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 36/99 (36%), Gaps = 7/99 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            ++VP++    +       I   + + TSL +   +S+ S +     G ++       + 
Sbjct: 167 FLLVPIMLVVLK-------IPTRMTIATSLAITFISSIGSTVGKLTTGQVDYIPALIMVV 219

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              I + + +     ++  FL    A+  L   I +   
Sbjct: 220 ASLIASPLGAAAGKKMNTKFLQIILAVLILATAIKIWLD 258


>gi|237750807|ref|ZP_04581287.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
 gi|229373252|gb|EEO23643.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
          Length = 269

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 98/254 (38%), Gaps = 16/254 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  + +   ++G++S LFG+GGG+++VP +     L+  D S   H A+G S+  +  +S
Sbjct: 3   IVCLAILGIITGSISALFGIGGGMIIVPCMLYLHYLL-PDLSFSTHDAVGISVMQMIFSS 61

Query: 83  VM-SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           V  S +   +   + +           I    + +++ ++ +  L   F    L      
Sbjct: 62  VFGSAINIFKKKNLCLDSAIFLGIGGFIGAAFSGVVLMYIAEKHLALIFLCVSLFTFYKF 121

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGAL----GVGGGIFTNLLMLFY-GASIYKAT 196
           L   +   ++       +    ++ G L+G      G+GGG+    L++++ G    K  
Sbjct: 122 LFSVKKTPQKVSLTKAKQGGILVIIGSLTGVFAISLGIGGGVMLVPLLMYFLGFDTKKIV 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S       A       +  G   + +         + A L++   S++   + T+L  
Sbjct: 182 PLSLFFIMCAALSGTFSFVRHGVITDSV---------LYAGLLLGAFSLVGVVIGTRLID 232

Query: 257 MIGKKYLTIGFSMI 270
            +  +       +I
Sbjct: 233 SMNAQIHYRILVII 246


>gi|282899001|ref|ZP_06306983.1| protein of unknown function DUF81 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281196141|gb|EFA71056.1| protein of unknown function DUF81 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 275

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 64/287 (22%), Positives = 110/287 (38%), Gaps = 49/287 (17%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  L+ + SF +G +  L G+GGG+V+VP+L+  F        + +  A+G SL  + 
Sbjct: 1   MAFSVLVWMGSFSAGLVGSLTGLGGGVVIVPLLTSVF-------GVDIRYAIGASLVSVI 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS+ S   + + G  N+++         I  VV + + + V   FL    A   +    
Sbjct: 54  ATSLGSASTYIKKGFTNIRLGMFLEVASTIGAVVGASIATLVSVKFLTIILAFVLIYSAY 113

Query: 140 LMLKRDRLYCERKFPDNYVKYI---------------------WGMVT----GFLSGALG 174
           L         E   PD   +Y+                      G       G +SG LG
Sbjct: 114 LSQIPKTESVEVVKPDPLAEYLQLNGTYPINDGVMSYNVNFLPAGFSIMLLAGIVSGLLG 173

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G F  L M    G     +T TS  +  + A  +  + +  G+   GL        +
Sbjct: 174 IGSGAFKVLAMDQAMGLPFKVSTTTSNFMIGVTAAASAGIYLSRGYIEPGL--------S 225

Query: 234 IGAVLIILPISILITP--LATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +  +L +LP + L     +  K       + L I FS+I+   +   
Sbjct: 226 MPVLLGVLPGAFLGARILIGAK------TQTLRIIFSIILVVMALKM 266



 Score = 49.3 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 47/125 (37%), Gaps = 7/125 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V+++        L+G +SGL G+G G   V         M     +   V+  TS  +I 
Sbjct: 152 VNFLPAGFSIMLLAGIVSGLLGIGSGAFKV-------LAMDQAMGLPFKVSTTTSNFMIG 204

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   +   G I   +    +  +     + + ++       L   F+I  ++M +
Sbjct: 205 VTAAASAGIYLSRGYIEPGLSMPVLLGVLPGAFLGARILIGAKTQTLRIIFSIILVVMAL 264

Query: 140 LMLKR 144
            M+  
Sbjct: 265 KMVYN 269


>gi|284040012|ref|YP_003389942.1| hypothetical protein Slin_5171 [Spirosoma linguale DSM 74]
 gi|283819305|gb|ADB41143.1| protein of unknown function DUF81 [Spirosoma linguale DSM 74]
          Length = 265

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/269 (18%), Positives = 100/269 (37%), Gaps = 37/269 (13%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
            ++ + G + GL G GG ++ VP+    F       +I   +A   SL V+  TS++  +
Sbjct: 10  ASAIVVGLVIGLAGGGGSILTVPIFVYVF-------NIPTVLATTYSLFVVGSTSLVGSL 62

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVT-SLMISHVDKSFLN-------------KAFAIF 133
            +  H  ++++    +     I+  ++   ++  +                     FAI 
Sbjct: 63  NYIWHRKVDLRATVAFALPSFISVYLSRRFLVPALPDPLFQFERFVLSKSEAILYFFAIV 122

Query: 134 CLLMGILMLKRDRLYCERKFPDNYV---KYIWGMVTGFLSGALGVGGGIFTNLLMLFY-G 189
            ++    M+K DR                 + G+  G L+G +G GGG     +++   G
Sbjct: 123 MIIAARAMIKSDRPEQGEAADGRPRYGNLALDGLAVGLLTGTIGAGGGFLIVPMLVLMAG 182

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             + +A ATS  + A+ +F   +  I      +  P W+        +L    +SI+   
Sbjct: 183 LPMPRAVATSVLIIAVNSFVGFIGDI-----QHTQPDWNF-------LLPFTGLSIIGIF 230

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +    +  +    L  GF   +   +   
Sbjct: 231 IGMYSAQFVPPDKLKKGFGWFVLVVALYM 259



 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +     G L+G  G GGG ++VP+L            + M  A+ TS+ +IA  S + 
Sbjct: 151 LALDGLAVGLLTGTIGAGGGFLIVPMLVLM-------AGLPMPRAVATSVLIIAVNSFVG 203

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           F+   +H   +   L  +  +  I   +       V    L K F  F L++ + M+ R+
Sbjct: 204 FIGDIQHTQPDWNFLLPFTGLSIIGIFIGMYSAQFVPPDKLKKGFGWFVLVVALYMISRE 263


>gi|207722331|ref|YP_002252767.1| permease protein [Ralstonia solanacearum MolK2]
 gi|206587508|emb|CAQ18090.1| permease protein [Ralstonia solanacearum MolK2]
          Length = 264

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 90/234 (38%), Gaps = 27/234 (11%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            ++G    +  H+A GT+L +IAP  ++ F  + +H  + ++ +        ++T V + 
Sbjct: 36  PILGYLYGMDQHLAQGTALVMIAPNVLIGFWRYHQHHPVPLRSVATLCAFAMVSTYVAAR 95

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLY--------------CERKFPDNYVKYIW 162
             + +D + L  AFA F + + +    + R                   +     V  + 
Sbjct: 96  FAAGLDAAHLRTAFAWFLIALAVYFASQLRDKAHPDPAAAHPAPAPGAARAMPPAVLLLL 155

Query: 163 GMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
           G+ +G +SG   VGGG+     L+  +G S  +A   +  +    +  AL    ++    
Sbjct: 156 GIASGGMSGIFTVGGGLVVVPALVTLFGMSQTRAQGMALALVVPGSLIALAAYAHA---- 211

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                   G V+ G  + +    ++       L++      L + F  ++   +
Sbjct: 212 --------GHVSWGTGIPLALGGMVSVSWGVALAHRFSPLRLRLVFCAVLLGAA 257



 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++++    SG +SG+F VGGGLV+VP L   F        +    A G +L ++ P S++
Sbjct: 151 VLLLLGIASGGMSGIFTVGGGLVVVPALVTLF-------GMSQTRAQGMALALVVPGSLI 203

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   +   G ++            ++      +        L   F    L   + ML
Sbjct: 204 ALAAYAHAGHVSWGTGIPLALGGMVSVSWGVALAHRFSPLRLRLVFCAVLLGAAVAML 261


>gi|319956493|ref|YP_004167756.1| hypothetical protein Nitsa_0740 [Nitratifractor salsuginis DSM
           16511]
 gi|319418897|gb|ADV46007.1| protein of unknown function DUF81 [Nitratifractor salsuginis DSM
           16511]
          Length = 248

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 11/198 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+       GTLSG FG+GGG V+VPVL                 A+G S+  +  +SV
Sbjct: 3   ILLFFVGMGIGTLSGFFGIGGGTVLVPVLLLM--------GFGFKHAVGISIMQMVFSSV 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                + + G++ +       F   +   ++  +  +V    L   F  F L   I M+ 
Sbjct: 55  YGSYLNIKKGSLQLGEGLFVGFGGFLGGYLSGYITPYVPDRVLQTVFIGFVLFALIRMMT 114

Query: 144 RDRLYCERKFPD--NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSA 200
                 E +       + ++ G+  G ++ ++GVGG I    L+       + KA +   
Sbjct: 115 SKAHSDEEESRSLPKALLFVIGVGIGVIAISIGVGGAIILIPLLSGLLHYPVKKAVSAGL 174

Query: 201 GVSALIAFPALLVRIYSG 218
                 +   L+ R+  G
Sbjct: 175 FFVVFSSVAGLIGRLMHG 192



 Score = 38.1 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 43/121 (35%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ V     G ++   GVGG ++++P+LS             +  A+   L  +  +SV
Sbjct: 130 ALLFVIGVGIGVIAISIGVGGAIILIPLLSGLLHY-------PVKKAVSAGLFFVVFSSV 182

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              +    HG I++               +   +  HV          +   ++  +M+ 
Sbjct: 183 AGLIGRLMHGQIDLLSGAIVGAGSLAGVYLGVWLKEHVCNKRHKTFIVVMYSIILAIMVY 242

Query: 144 R 144
           +
Sbjct: 243 K 243


>gi|220905401|ref|YP_002480713.1| hypothetical protein Ddes_2139 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869700|gb|ACL50035.1| protein of unknown function DUF81 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 245

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 87/250 (34%), Gaps = 22/250 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I ++     L G L G+ GVGG  +++P     F           H+AMGT+L    P 
Sbjct: 2   MIAVLYATCLLVGFLVGITGVGG--ILIPPALILFSGQ------ETHMAMGTALASFLPV 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            ++  + +RR G ++  +   ++    +     +L+ + +    L    A   +  G+  
Sbjct: 54  GLVGTIMYRRLGHVDWHMALPYMLG-SLAAWPGALLNAWLPAGPLVALLAGIIIFAGLCA 112

Query: 142 LKRDRLYCERKF-PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           L+  R      F       +  G VTG ++G  G GG + +   M+  G S   A   + 
Sbjct: 113 LRPPRPGSGSAFWQSRRGFFCIGAVTGLMAGLTGAGGPVLSIPWMIMAGVSPMTAVGLAM 172

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                 A    +           +    + F  +  +  +    +        ++  I  
Sbjct: 173 PYQVTTALFGTIG---------NMSDGHVDFTILPYICGMALAGLFA---GVAVARRIPT 220

Query: 261 KYLTIGFSMI 270
           + L      +
Sbjct: 221 ELLRKLIGGL 230



 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 38/109 (34%), Gaps = 8/109 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
                 ++G ++GL G GG ++ +P +  A         +    A+G ++     T++  
Sbjct: 131 FFCIGAVTGLMAGLTGAGGPVLSIPWMIMA--------GVSPMTAVGLAMPYQVTTALFG 182

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
            + +   G ++  IL     +          +   +    L K     C
Sbjct: 183 TIGNMSDGHVDFTILPYICGMALAGLFAGVAVARRIPTELLRKLIGGLC 231


>gi|241203701|ref|YP_002974797.1| hypothetical protein Rleg_0963 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857591|gb|ACS55258.1| protein of unknown function DUF81 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 243

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 97/255 (38%), Gaps = 19/255 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   IV  F +  + G  G+  G++    L  AF +   + S   HVA          T+
Sbjct: 5   IFFFIVVGFCAQIVDGALGMAFGVLSTTSLL-AFGVPAANASAMTHVAE-------MFTT 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H  H  ++ +++        I   + + +++++D   +    + + + +G+++L
Sbjct: 57  AASGISHAYHRNVDWRLVARLAPAGMIGGAIGAYLLANIDGKAIAPFVSAYLIAIGLVIL 116

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            +      ++   +++    G   G L    G G G      ++  G  + +   ++   
Sbjct: 117 YKAFRPPPKRDVRDWMVPPVGFCGGVLDAIGGGGWGPIVTSSLVSRGHDLKRVIGSTNFT 176

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              +     L  +            +LG+  + + + ++   ++  P    L   +  + 
Sbjct: 177 EFAVTLTISLTFML-----------TLGWSELNSAIGVIIGGVIAAPFGAILVKRLPVRP 225

Query: 263 LTIGFSMIMFTTSFV 277
           L +  SMI+  TS +
Sbjct: 226 LMVAVSMIIIGTSAI 240


>gi|229102153|ref|ZP_04232864.1| hypothetical protein bcere0019_13160 [Bacillus cereus Rock3-28]
 gi|228681353|gb|EEL35519.1| hypothetical protein bcere0019_13160 [Bacillus cereus Rock3-28]
          Length = 262

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 57/274 (20%), Positives = 111/274 (40%), Gaps = 40/274 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T + 
Sbjct: 1   MLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGLA 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ R
Sbjct: 54  STLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLMLR 113

Query: 145 DRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL- 183
           D+L           +R F DN    I              + GF+SG  G+GGG      
Sbjct: 114 DKLKPLSLSNMSVIKRSFTDNKGNTIHYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPA 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +    + A ATS  +  L A  +    I            SLG V+    LI++P 
Sbjct: 174 MMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWTYALILIPG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   +   ++  +    +     + +      
Sbjct: 222 AWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 255


>gi|229114996|ref|ZP_04244408.1| hypothetical protein bcere0017_12920 [Bacillus cereus Rock1-3]
 gi|228668508|gb|EEL23938.1| hypothetical protein bcere0017_12920 [Bacillus cereus Rock1-3]
          Length = 262

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 57/274 (20%), Positives = 112/274 (40%), Gaps = 40/274 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T + 
Sbjct: 1   MLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGLA 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +H  ++ K             ++ S     +++   +  F IF +L+ IL++ R
Sbjct: 54  STLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLILVSILLMLR 113

Query: 145 DRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL- 183
           D+L           +R F DN    +              + GF+SG  G+GGG      
Sbjct: 114 DKLKPLSLSNMSVIKRSFTDNKGNTVHYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPA 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +    + A ATS  +  L A  +    I            SLG V+    LI++P 
Sbjct: 174 MMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWTYALILIPG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   +   ++  +    +     + +      
Sbjct: 222 AWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 255


>gi|269798825|ref|YP_003312725.1| hypothetical protein Vpar_1769 [Veillonella parvula DSM 2008]
 gi|269095454|gb|ACZ25445.1| protein of unknown function DUF81 [Veillonella parvula DSM 2008]
          Length = 269

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 94/272 (34%), Gaps = 28/272 (10%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            D +V +     +  FL+  +  + G GGGLV VP+    F            + +GTSL
Sbjct: 7   IDNIVVFYIFFTIVGFLAAMIGTIIGAGGGLVFVPLFMYWF------PEWSPSMVVGTSL 60

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
             +   ++   + + +   + +     +        ++ + M           AF  F L
Sbjct: 61  FSVMCNAISGSIAYLKQKKVYINAAIIFSLATFPGAILGAQMSGWFSGKGFMFAFGCFML 120

Query: 136 LMGILMLKRDRLYCERKFP---------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
              +L+  ++    ERK              +        GF+S   G+GGG+     ++
Sbjct: 121 CASVLIGFKNFRKGERKEESLTLEQLSYSKPIGISISFFVGFISSIFGIGGGLIHVPALI 180

Query: 187 FY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           +  G   + ATATS  + A+     ++  +                +     +     +I
Sbjct: 181 YLMGFPTHMATATSQSILAVSTTVGVITHLIES------------HIIFSIAIPTSIGAI 228

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               +  +++  +  K +    S+ +F  +  
Sbjct: 229 FGAQVGARIAKRLKAKAILALMSIAVFALAVR 260



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 7/123 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           + I  SF  G +S +FG+GGGL+ VP L               H+A  TS  ++A ++ +
Sbjct: 152 IGISISFFVGFISSIFGIGGGLIHVPALIYLMGF-------PTHMATATSQSILAVSTTV 204

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + H     I   I             V + +   +    +    +I    + + ++ +
Sbjct: 205 GVITHLIESHIIFSIAIPTSIGAIFGAQVGARIAKRLKAKAILALMSIAVFALAVRLILK 264

Query: 145 DRL 147
             +
Sbjct: 265 SGI 267


>gi|289449455|ref|YP_003474469.1| hypothetical protein HMPREF0868_0117 [Clostridiales genomosp. BVAB3
           str. UPII9-5]
 gi|289184002|gb|ADC90427.1| conserved hypothetical protein [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 272

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 57/261 (21%), Positives = 93/261 (35%), Gaps = 25/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I LI+    L+G LSGLF VGGG+V+VP L+   +            A  TSL  I  TS
Sbjct: 20  IVLIVFIGLLAGFLSGLFAVGGGIVIVPALTVFMKFD-------QRHATATSLVAIIITS 72

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   + +   G ++       I      + +       + K      F +F LL+ I   
Sbjct: 73  LCGSIVYGLDGKVSFLSAFFLIIGSVFGSQIGVYFSHILPKKIFPWCFTLFVLLV-ICSS 131

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALG-----VGGGIFTNLLMLFYGASIYKATA 197
           +         F  +++K I  +  G  SG         GGGI    + L  G     A  
Sbjct: 132 QVWIPLRNVDFNVSFLKAICLIFIGVFSGIFSGILGVGGGGIIVPCVQLLLGMGDLMARG 191

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T+  V+   A    +      +       ++ G       +II   +     L   +++ 
Sbjct: 192 TALLVTLPTAISGSIANARYHYTH-----FTEG-------IIIGIFATFTVKLGAIIAHS 239

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           I      I F + +F+     
Sbjct: 240 ISPFICNILFCIFLFSACLRM 260



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 51/136 (37%), Gaps = 13/136 (9%)

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
             + R+    +  F +  +    G++ GFLSG   VGGGI     +  F       ATAT
Sbjct: 4   RYMLRNIFKTKYNFHNIVLIVFIGLLAGFLSGLFAVGGGIVIVPALTVFMKFDQRHATAT 63

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S     + +    +V    G             V+  +   ++  S+  + +    S+++
Sbjct: 64  SLVAIIITSLCGSIVYGLDGK------------VSFLSAFFLIIGSVFGSQIGVYFSHIL 111

Query: 259 GKKYLTIGFSMIMFTT 274
            KK     F++ +   
Sbjct: 112 PKKIFPWCFTLFVLLV 127



 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 33/84 (39%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +A GT+L V  PT++   + + R+   +             T  + +++   +     N 
Sbjct: 188 MARGTALLVTLPTAISGSIANARYHYTHFTEGIIIGIFATFTVKLGAIIAHSISPFICNI 247

Query: 129 AFAIFCLLMGILMLKRDRLYCERK 152
            F IF     + M+ +  +  + K
Sbjct: 248 LFCIFLFSACLRMILKTGVLAKNK 271


>gi|229074741|ref|ZP_04207761.1| hypothetical protein bcere0024_12970 [Bacillus cereus Rock4-18]
 gi|229096041|ref|ZP_04227016.1| hypothetical protein bcere0020_12900 [Bacillus cereus Rock3-29]
 gi|228687426|gb|EEL41329.1| hypothetical protein bcere0020_12900 [Bacillus cereus Rock3-29]
 gi|228708381|gb|EEL60534.1| hypothetical protein bcere0024_12970 [Bacillus cereus Rock4-18]
          Length = 262

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 56/274 (20%), Positives = 111/274 (40%), Gaps = 40/274 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T + 
Sbjct: 1   MLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGLA 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ R
Sbjct: 54  STLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLMLR 113

Query: 145 DRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL- 183
           D+L           +R F DN    +              + GF+SG  G+GGG      
Sbjct: 114 DKLKPLSLSNMSVIKRSFTDNKGNTVHYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPA 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +    + A ATS  +  L A  +    I            SLG V+    LI++P 
Sbjct: 174 MMLLFAFPAHIAVATSMFIVFLSAIVSSATHI------------SLGNVSWTYALILIPG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   +   ++  +    +     + +      
Sbjct: 222 AWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 255


>gi|319936025|ref|ZP_08010448.1| hypothetical protein HMPREF9488_01279 [Coprobacillus sp. 29_1]
 gi|319808975|gb|EFW05482.1| hypothetical protein HMPREF9488_01279 [Coprobacillus sp. 29_1]
          Length = 254

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 100/261 (38%), Gaps = 25/261 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           + I+A   +G  +GL G+    V+ P+L      +G D     + A+G SL      S +
Sbjct: 6   IYIIAGMGAGIGTGLAGLSAAAVISPMLI---TFLGFDP----YEAVGISLASDVLASAI 58

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL---- 140
           S   + ++  +++K     +  + + T++ S + S V    +        LL+GI     
Sbjct: 59  SAYTYGKNKNLDIKNGLVMLASVLVFTLIGSYIASLVPGGTMGSFSVFMTLLLGIKFIVR 118

Query: 141 --MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
             M  ++    + +   N    I G   GF+ G +G GGG+   L++       +  A  
Sbjct: 119 PVMTTKEAQAEKTQKEKNIQSLICGCFIGFICGFIGAGGGMMLLLILTSVLQYELKTAVG 178

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS  + +  AF         G           G  NI A+++ +  +++   +A   +  
Sbjct: 179 TSVFIMSFTAFTGACSHFAIG-----------GMPNIEALIVCVVATLVGARIAALFANK 227

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
              K L     +++       
Sbjct: 228 AEPKRLNQATGVVLTVLGLAM 248


>gi|163751894|ref|ZP_02159108.1| hypothetical protein KT99_00715 [Shewanella benthica KT99]
 gi|161328244|gb|EDP99408.1| hypothetical protein KT99_00715 [Shewanella benthica KT99]
          Length = 259

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 94/263 (35%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++     L+G +  + G GGGL+ +P L            I  H A+GT+       S 
Sbjct: 11  AILAGIGLLAGFIDAIAG-GGGLLSIPALLTL--------GINPHTALGTNKLAACFGSS 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   + +       +            V  + ++S +D  +L K   +  +++ I  L 
Sbjct: 62  TAAYTYYKQNLFTPHLWYYTFIATFFGAVAGTFIVSLIDSRWLEKLLPLMIMIIAIYTLL 121

Query: 144 RDR------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
           +            ++      +++ G   GF  G  G G G F T     ++   +  + 
Sbjct: 122 KPNAMGCNTFTPLKQPASKIKQWLQGFPLGFYDGFAGPGTGAFWTITSTTYHKLPLLHSC 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++      +L++ I            +LG VN+   L +    +L + +  K + 
Sbjct: 182 GLARTMTFTSNLTSLVIFI------------TLGQVNVIIGLFMGLCMMLGSFIGAKTAI 229

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G +++   F  ++   +   A
Sbjct: 230 KFGVQFIRPAFITLVLLIAAKLA 252


>gi|170720658|ref|YP_001748346.1| hypothetical protein PputW619_1472 [Pseudomonas putida W619]
 gi|169758661|gb|ACA71977.1| protein of unknown function DUF81 [Pseudomonas putida W619]
          Length = 261

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 83/228 (36%), Gaps = 17/228 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++          +   + 
Sbjct: 41  AIPALGVLFGLDQQLAQGTALVMVVPNVLLALWRYHQRNRIELRHALPLSVCSLVFAWLG 100

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGI----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           S+    +D   +   F  F + + +     M  +                + G  +G + 
Sbjct: 101 SIWAVGIDAQAMRLGFVGFLVALALWNVARMFNKSAPASPELRHHWPWLGVLGCFSGTMG 160

Query: 171 GALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G  GVGG +    ++   +GA+   A   S  ++A      LL       G++    W +
Sbjct: 161 GLFGVGGAVVATPILTSVFGATQVVAQGLSLALAAPSTMVTLLTY-----GVHHSVDWGV 215

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G       + +    +L      +L++ + +K L   F + +   + +
Sbjct: 216 G-------IPLAVGGLLSISWGVRLAHALPEKVLRAMFCVFLVVCAVM 256



 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 58/127 (45%), Gaps = 7/127 (5%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           +   +  +   + V    SGT+ GLFGVGG +V  P+L+  F    +       VA G S
Sbjct: 138 ASPELRHHWPWLGVLGCFSGTMGGLFGVGGAVVATPILTSVFGATQV-------VAQGLS 190

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           L + AP+++++ + +  H +++  +         ++      +   + +  L   F +F 
Sbjct: 191 LALAAPSTMVTLLTYGVHHSVDWGVGIPLAVGGLLSISWGVRLAHALPEKVLRAMFCVFL 250

Query: 135 LLMGILM 141
           ++  +++
Sbjct: 251 VVCAVML 257


>gi|328950601|ref|YP_004367936.1| protein of unknown function DUF81 [Marinithermus hydrothermalis DSM
           14884]
 gi|328450925|gb|AEB11826.1| protein of unknown function DUF81 [Marinithermus hydrothermalis DSM
           14884]
          Length = 227

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 7/128 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++ A  L+G  SGL G+GGG VMVP L                +A GTSL  +   + 
Sbjct: 107 IILLFAGALAGFASGLLGIGGGTVMVPALVL-------GAGFPQQLAQGTSLAAMILPAW 159

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +  + H R G +  +I    +  + +       +   + +  L   FA+  L  G   ++
Sbjct: 160 VGALTHYRLGHVRGEIAPWLLAGIAVGAYAGGSLALGLPEGILRGVFALVLLWTGTRYVR 219

Query: 144 RDRLYCER 151
                 +R
Sbjct: 220 SRTRGEQR 227



 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 78/221 (35%), Gaps = 17/221 (7%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             +  H A GTSL  ++ T+++    + + G +++           +T  + +     +D
Sbjct: 9   SKLRQHEAHGTSLLAVSATALVGGGTYAQAGAVDLAGAAALTVTAMLTARLGARFTRRLD 68

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRLYCERK----FPDNYVKYIWGMVTGFLSGALGVGGG 178
              L + F  F +L  +L+  +  L              +    G + GF SG LG+GGG
Sbjct: 69  PLSLRRVFGGFLILTALLLPFKQHLPHVAAGGAGAFSTIILLFAGALAGFASGLLGIGGG 128

Query: 179 IFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
                 ++   G     A  TS     L A+   L              + LG V     
Sbjct: 129 TVMVPALVLGAGFPQQLAQGTSLAAMILPAWVGALT------------HYRLGHVRGEIA 176

Query: 238 LIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             +L    +       L+  + +  L   F++++  T   +
Sbjct: 177 PWLLAGIAVGAYAGGSLALGLPEGILRGVFALVLLWTGTRY 217


>gi|116251105|ref|YP_766943.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255753|emb|CAK06834.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 243

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 98/255 (38%), Gaps = 19/255 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   IV  F +  + G  G+  G++    L  AF +   + S   HVA          T+
Sbjct: 5   IFFFIVVGFCAQIVDGALGMAFGVLSTTSLL-AFGVPAANASAMTHVAE-------MFTT 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H  H  ++ +++        I   + + +++++D   +    + + + +G+++L
Sbjct: 57  AASGISHAYHRNVDWRLVARLAPAGMIGGAIGAYLLANIDGKTIEPFVSAYLIAIGLVIL 116

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            +      ++   +++    G+  G L    G G G      ++  G  + +   ++   
Sbjct: 117 YKAFRPPPKRDVRDWMVPPVGLCGGMLDAIGGGGWGPIVTSSLVSRGHDLKRVIGSTNFT 176

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              +     L  I            +LG+  + + + ++   ++  P    L   +  + 
Sbjct: 177 EFAVTLTISLTFIL-----------TLGWSELDSAIGLIIGGVIAAPFGAILVKRLPVRP 225

Query: 263 LTIGFSMIMFTTSFV 277
           L +  SMI+  TS +
Sbjct: 226 LMVAVSMIIIGTSAI 240


>gi|83747354|ref|ZP_00944394.1| Putative permease [Ralstonia solanacearum UW551]
 gi|207739634|ref|YP_002258027.1| permease protein [Ralstonia solanacearum IPO1609]
 gi|83725941|gb|EAP73079.1| Putative permease [Ralstonia solanacearum UW551]
 gi|206593014|emb|CAQ59920.1| permease protein [Ralstonia solanacearum IPO1609]
          Length = 264

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 90/234 (38%), Gaps = 27/234 (11%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            ++G    +  H+A GT+L +IAP  ++ F  + +H  + ++ +        ++T V + 
Sbjct: 36  PILGYLYGMDQHLAQGTALVMIAPNVLIGFWRYHQHHPVPLRSVATLCACAMVSTYVAAR 95

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLY--------------CERKFPDNYVKYIW 162
             + +D + L  AFA F + + +    + R                   +     V  + 
Sbjct: 96  FAAGLDAAHLRTAFAWFLIALAVYFASQLRDKAHPDPAAAHPAPAPGAARAMPPAVLLLL 155

Query: 163 GMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
           G+ +G +SG   VGGG+     L+  +G S  +A   +  +    +  AL    ++    
Sbjct: 156 GIASGGMSGIFTVGGGLVVVPALVTLFGMSQTRAQGMALALVVPGSLIALAAYAHA---- 211

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                   G V+ G  + +    ++       L++      L + F  ++   +
Sbjct: 212 --------GHVSWGTGIPLALGGMVSVSWGVALAHRFSPLRLRLVFCAVLLGAA 257



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++++    SG +SG+F VGGGLV+VP L   F        +    A G +L ++ P S++
Sbjct: 151 VLLLLGIASGGMSGIFTVGGGLVVVPALVTLF-------GMSQTRAQGMALALVVPGSLI 203

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   +   G ++            ++      +        L   F    L   + ML
Sbjct: 204 ALAAYAHAGHVSWGTGIPLALGGMVSVSWGVALAHRFSPLRLRLVFCAVLLGAAVAML 261


>gi|196036619|ref|ZP_03104013.1| putative membrane protein [Bacillus cereus W]
 gi|195990819|gb|EDX54793.1| putative membrane protein [Bacillus cereus W]
          Length = 254

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 103/260 (39%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTAHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + +++  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNAMDKTLVVYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R   +    + ++  +   + G  SG +G GG      +ML      I +  AT
Sbjct: 120 MMFVPKRNNGDELKYNKWLASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRRTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LII   SI   P+  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVVMPALIIAIASIFAAPIGARVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAVKM 247


>gi|323490365|ref|ZP_08095580.1| putative permease [Planococcus donghaensis MPA1U2]
 gi|323396035|gb|EGA88866.1| putative permease [Planococcus donghaensis MPA1U2]
          Length = 258

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 100/263 (38%), Gaps = 18/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D+I +I +  F+   +SG+ G+GG ++  P+L     ++G   +   H   G S   + 
Sbjct: 3   IDFIIVIFLIGFIGSFISGMVGIGGSIIKYPMLLYIPVMLGYT-AFSAHEVSGISAIQVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++     +R  G +N  ++      + + + +     + + +  +N  +A+   +  I
Sbjct: 62  FATIAGVWAYRGSGYLNKTLIAYMGGAILVGSFIGGYGSTLLSEQAINIVYAVLATIAVI 121

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG-----IFTNLLMLFYGASIYK 194
           +M    +   +                 F  G      G     I   ++++        
Sbjct: 122 MMFMPKKGVDDIPLDQVTFNKWLAAGLAFAVGIAAGIVGAAGAFILVPIMLIVLKIPTRM 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             ATS  ++ L +  A + +I +              +   A ++I+  S++  PL  KL
Sbjct: 182 TIATSLAITFLSSIGATVGKIVTDQ-----------ILYGPASIMIV-ASLIAAPLGAKL 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  KYL    ++++  T+  
Sbjct: 230 GQKMNTKYLQWILALLILGTAIK 252


>gi|315639084|ref|ZP_07894252.1| conserved hypothetical integral membrane protein [Campylobacter
           upsaliensis JV21]
 gi|315480860|gb|EFU71496.1| conserved hypothetical integral membrane protein [Campylobacter
           upsaliensis JV21]
          Length = 263

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 71/195 (36%), Gaps = 13/195 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             +   +SG  SGLFG+GGG+++VP +            I  H A+  S+  +   ++  
Sbjct: 8   YFLVGIISGIASGLFGIGGGMIIVPTMLFL--------GISSHQAVAISVVQMIFAAIFG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              + +   +N K          +    +  ++S +    L   F        +      
Sbjct: 60  SYINHKKKNLNFKDGIYIGLGGLLGASFSGTLVSLLSDIALTAIFLCVSFAFFLKYAFGV 119

Query: 146 RLYCER----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSA 200
           +         KF  N + +  G+ TG  + +LG+GGG+    ++ ++ G    K    S 
Sbjct: 120 KNTTNHTQRSKFAKNAILFGAGVFTGVFAISLGIGGGLLIAPILAYFLGYDNKKVVPISL 179

Query: 201 GVSALIAFPALLVRI 215
                 +   L   I
Sbjct: 180 FFVVFASLAGLFSFI 194


>gi|22125482|ref|NP_668905.1| hypothetical protein y1587 [Yersinia pestis KIM 10]
 gi|45442199|ref|NP_993738.1| hypothetical protein YP_2410 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51596949|ref|YP_071140.1| hypothetical protein YPTB2630 [Yersinia pseudotuberculosis IP
           32953]
 gi|108808085|ref|YP_652001.1| hypothetical protein YPA_2090 [Yersinia pestis Antiqua]
 gi|108812355|ref|YP_648122.1| hypothetical protein YPN_2193 [Yersinia pestis Nepal516]
 gi|145599285|ref|YP_001163361.1| hypothetical protein YPDSF_2007 [Yersinia pestis Pestoides F]
 gi|149365227|ref|ZP_01887262.1| putative membrane protein [Yersinia pestis CA88-4125]
 gi|153949068|ref|YP_001400386.1| hypothetical protein YpsIP31758_1407 [Yersinia pseudotuberculosis
           IP 31758]
 gi|162421013|ref|YP_001604983.1| hypothetical protein YpAngola_A0375 [Yersinia pestis Angola]
 gi|165925366|ref|ZP_02221198.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165937018|ref|ZP_02225583.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166008059|ref|ZP_02228957.1| putative membrane protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166214257|ref|ZP_02240292.1| putative membrane protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399520|ref|ZP_02305044.1| putative membrane protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167421294|ref|ZP_02313047.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424606|ref|ZP_02316359.1| putative membrane protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167469292|ref|ZP_02333996.1| hypothetical protein YpesF_15699 [Yersinia pestis FV-1]
 gi|170023757|ref|YP_001720262.1| hypothetical protein YPK_1516 [Yersinia pseudotuberculosis YPIII]
 gi|186896030|ref|YP_001873142.1| hypothetical protein YPTS_2725 [Yersinia pseudotuberculosis PB1/+]
 gi|218929825|ref|YP_002347700.1| hypothetical protein YPO2753 [Yersinia pestis CO92]
 gi|229838320|ref|ZP_04458479.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229895350|ref|ZP_04510523.1| conserved inner membrane protein [Yersinia pestis Pestoides A]
 gi|229898885|ref|ZP_04514030.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229902714|ref|ZP_04517831.1| conserved inner membrane protein [Yersinia pestis Nepal516]
 gi|270490113|ref|ZP_06207187.1| inner membrane family protein [Yersinia pestis KIM D27]
 gi|294504660|ref|YP_003568722.1| hypothetical protein YPZ3_2550 [Yersinia pestis Z176003]
 gi|21958376|gb|AAM85156.1|AE013761_9 putative structural protein [Yersinia pestis KIM 10]
 gi|45437063|gb|AAS62615.1| putative membrane protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|51590231|emb|CAH21868.1| putative membrane protein [Yersinia pseudotuberculosis IP 32953]
 gi|108776003|gb|ABG18522.1| membrane protein [Yersinia pestis Nepal516]
 gi|108779998|gb|ABG14056.1| putative membrane protein [Yersinia pestis Antiqua]
 gi|115348436|emb|CAL21372.1| putative membrane protein [Yersinia pestis CO92]
 gi|145210981|gb|ABP40388.1| membrane protein [Yersinia pestis Pestoides F]
 gi|149291640|gb|EDM41714.1| putative membrane protein [Yersinia pestis CA88-4125]
 gi|152960563|gb|ABS48024.1| putative membrane protein [Yersinia pseudotuberculosis IP 31758]
 gi|162353828|gb|ABX87776.1| putative membrane protein [Yersinia pestis Angola]
 gi|165914881|gb|EDR33493.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165922973|gb|EDR40124.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165992441|gb|EDR44742.1| putative membrane protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166204613|gb|EDR49093.1| putative membrane protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166960783|gb|EDR56804.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167052024|gb|EDR63432.1| putative membrane protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056488|gb|EDR66257.1| putative membrane protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169750291|gb|ACA67809.1| protein of unknown function DUF81 [Yersinia pseudotuberculosis
           YPIII]
 gi|186699056|gb|ACC89685.1| protein of unknown function DUF81 [Yersinia pseudotuberculosis
           PB1/+]
 gi|229680161|gb|EEO76260.1| conserved inner membrane protein [Yersinia pestis Nepal516]
 gi|229688433|gb|EEO80504.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229694686|gb|EEO84733.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229701658|gb|EEO89684.1| conserved inner membrane protein [Yersinia pestis Pestoides A]
 gi|262362722|gb|ACY59443.1| hypothetical protein YPD4_2536 [Yersinia pestis D106004]
 gi|270338617|gb|EFA49394.1| inner membrane family protein [Yersinia pestis KIM D27]
 gi|294355119|gb|ADE65460.1| hypothetical protein YPZ3_2550 [Yersinia pestis Z176003]
 gi|320014551|gb|ADV98122.1| conserved inner membrane protein [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 268

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 95/234 (40%), Gaps = 25/234 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++   + L+G +  + G GGGL+ VP L            +    A+ T+       S  
Sbjct: 13  ILFAVALLAGFIDSIAG-GGGLLTVPALLAV--------GLPPAQALATNKLQSVGGSFS 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +   R G +N+K  K  I +  + +++ ++++ ++    L +   +  + +G+  L  
Sbjct: 64  ASLYFIRRGAVNLKQQKLTIALTLVGSMLGAILVQYMRADILRQILPLLVIGIGVYFLLT 123

Query: 145 DRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSA 200
            RL     +R+        I G   GF  G  G G G F  L  +   G ++ K+TA + 
Sbjct: 124 PRLGVVDQQRRLSALPFALIAGGGIGFYDGFFGPGAGSFYALAFVTLCGFNLAKSTAHAK 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            ++       L+  I  G  +     WS+G       L++L   +L   L   +
Sbjct: 184 VLNFTSNLGGLIFFIIGGKVV-----WSIG-------LVMLVGQVLGARLGAHM 225


>gi|229140306|ref|ZP_04268861.1| hypothetical protein bcere0013_34050 [Bacillus cereus BDRD-ST26]
 gi|229197787|ref|ZP_04324506.1| hypothetical protein bcere0001_33250 [Bacillus cereus m1293]
 gi|228585732|gb|EEK43831.1| hypothetical protein bcere0001_33250 [Bacillus cereus m1293]
 gi|228642867|gb|EEK99143.1| hypothetical protein bcere0013_34050 [Bacillus cereus BDRD-ST26]
          Length = 272

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 58/274 (21%), Positives = 112/274 (40%), Gaps = 27/274 (9%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLF-GVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           M+F+  +  + +I  ++   +++  ++ L  G+  G V          ++ +   I +HV
Sbjct: 1   MLFICVEERIWWIIALLEGEYVAIIITMLVMGILLGFVGAGGAGFIIAILTLVFHIPIHV 60

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ TSL  +A T++   + H R G + + I         + + + S + S +    L+  
Sbjct: 61  ALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGALGSYIGSKIGSLIPGHLLHWF 120

Query: 130 FAIFCLLMGILMLKRDRLYCERKFP-----------DNYVKYIWGMVTGFLSGALGVGGG 178
            A    L  I M  +   +  R+             +       G+VTG ++G+ G+G  
Sbjct: 121 TAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGMMAGSFGIGSA 180

Query: 179 IFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
            F  L LM+  G +I ++  T+  V   IA    L               S G+++   +
Sbjct: 181 PFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYLDYILL 228

Query: 238 LIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 229 LQVLIGTMLGAYIGAKFTNYAPRMLLK--FSMIM 260


>gi|296139145|ref|YP_003646388.1| hypothetical protein Tpau_1421 [Tsukamurella paurometabola DSM
           20162]
 gi|296027279|gb|ADG78049.1| protein of unknown function DUF81 [Tsukamurella paurometabola DSM
           20162]
          Length = 260

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 4/259 (1%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I ++++    SG  + LFG GGG V VPVL  A   +G        VA+ TS  ++   
Sbjct: 1   MIVILVLVGVASGVTTALFGFGGGFVAVPVLVWAEVGLG---DDAARVAVATSSVLMVVG 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++++ +    H    ++     + +L +   V +L    V    ++  F ++ L+  + +
Sbjct: 58  ALVATVSTPTHVLAGLRGSTCLLVLLGMGGAVGALAARGVPGGAISWGFLVYLLVTIVSV 117

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
             R         P   ++   G+  G ++  LGVGG + T  +M   G  +  ATA +  
Sbjct: 118 TMRKGFLEVVDGPVRPLRPAVGLPIGTIAAFLGVGGSVLTVPVMRRSGHRMAVATALANP 177

Query: 202 VSALIAFPALLVRIYSG-WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
           ++  +A PA +V + +      G     +G V++ A   +L  S+ +     +    I  
Sbjct: 178 LTLAVAVPAAVVFLLASGGRPEGAGGGVIGAVDVRAAGALLAGSVPVVVYLRRWGPRISD 237

Query: 261 KYLTIGFSMIMFTTSFVFA 279
                 +  ++ T + V A
Sbjct: 238 NVHARCYVALLVTVAIVMA 256


>gi|163744253|ref|ZP_02151613.1| integral membrane protein, putative [Oceanibulbus indolifex HEL-45]
 gi|161381071|gb|EDQ05480.1| integral membrane protein, putative [Oceanibulbus indolifex HEL-45]
          Length = 304

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 100/277 (36%), Gaps = 53/277 (19%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG ++ P+L       GI  +    VA+ TS   I  +S  + + H +  T++
Sbjct: 28  SGMFGVGGGFLITPLLFFV----GIPPA----VAVATSTNQIVASSFSALLAHLKRRTVD 79

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGILMLKRDRLYCER 151
            ++    +    I + +   + +++         +   + IF  ++G LM         R
Sbjct: 80  FRMGWVLLAGGLIGSGIGMFIFNYLKSLGQVDLLVTLCYVIFLGIIGGLMFFESLRAIRR 139

Query: 152 KFPDNYVK----------------------------YIWGMVTGFLSGALGVGGGIFTNL 183
                 V+                             + G   G LS  +GVGGG     
Sbjct: 140 SRKGGRVQRKKHYWVHGLPFKLRFRVSGLYISVIPPVLVGAAVGMLSAIMGVGGGFIMVP 199

Query: 184 LMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            M++  G        TS  +  +I        +++              V+I   +++L 
Sbjct: 200 AMIYLLGMPTKVVIGTS--LLQIIFVTGFTTMLHATTNQT---------VDIVLAVLLLV 248

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             +L   + T++   +  + L I  ++++   S   A
Sbjct: 249 GGVLGAQVGTRIGVRMQAEQLRILLAVLVLAVSGKLA 285



 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G LS + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 176 VLVGAAVGMLSAIMGVGGGFIMVPAMIYLL-------GMPTKVVIGTSLLQIIFVTGFTT 228

Query: 87  MEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H   + T+++ +    +    +   V + +   +    L    A+  L +   +    
Sbjct: 229 MLHATTNQTVDIVLAVLLLVGGVLGAQVGTRIGVRMQAEQLRILLAVLVLAVSGKLALDL 288

Query: 146 RLYCER 151
            L    
Sbjct: 289 LLEPAE 294


>gi|312887340|ref|ZP_07746941.1| siroheme synthase [Mucilaginibacter paludis DSM 18603]
 gi|311300143|gb|EFQ77211.1| siroheme synthase [Mucilaginibacter paludis DSM 18603]
          Length = 505

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 97/264 (36%), Gaps = 21/264 (7%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
             +       + A F+   + G  G+  G+      +     MGI  +     +MG  L 
Sbjct: 250 QTISPTFYYFLAAGFVFAMIDGAIGMSYGVTS----TTFSLTMGIPPATA---SMGVHLS 302

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD--KSFLNKAFAIFC 134
            I    +     H R G +N ++ K  +    I  V+ + ++S ++    +     +++ 
Sbjct: 303 EIMSNGIAG-WMHYRMGNVNWRLFKLLLIPGIIGAVLGAYILSSLEHYSMYTKPVVSLYT 361

Query: 135 LLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
           L++G ++  +  +   +R         + G   GF+    G G G      ++  G +  
Sbjct: 362 LILGCVIFSKAFKGKRKRADKKIKRISLLGFGGGFIDAVGGGGWGSIVLSSLIAGGRNAR 421

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            +  T       IA  + L  I      N          +  AV  ++  S L +P+A K
Sbjct: 422 FSLGTVKLSRFFIAMMSSLTFITMLSHGN----------HWEAVAGMIIGSALASPIAAK 471

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           +S  I  K + +  ++I+   S  
Sbjct: 472 VSNQISTKAIMVSVAVIVILISLY 495


>gi|218680679|ref|ZP_03528576.1| putative transmembrane protein [Rhizobium etli CIAT 894]
          Length = 243

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 97/253 (38%), Gaps = 19/253 (7%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
             IV  F +  + G  G+  G++    L  AF +   + S   HVA          T+  
Sbjct: 7   FFIVVGFCAQIVDGALGMAFGVLSTTSLL-AFGVPAANASAMTHVAE-------MFTTAA 58

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + H  H  ++ +++        I   + + +++++D   +    + + + +G+L+L +
Sbjct: 59  SGLSHAYHRNVDWRLVARLAPAGMIGGAIGAYLLANIDGKTIAPFVSAYLIAIGLLILYK 118

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
                 ++   +++    G+  G L    G G G      ++  G  + +   ++     
Sbjct: 119 AFRSPPKRDVRDWIVPPVGLCGGLLDAIGGGGWGPVVTSTLVSRGHDLKRVIGSTNFTEF 178

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
            +     L  +            +LG+  + + + ++   ++  P    L   +  + L 
Sbjct: 179 AVTLTISLTFVV-----------TLGWSELNSAIGLIIGGVIAAPFGALLVKRLPVRALM 227

Query: 265 IGFSMIMFTTSFV 277
           +  SMI+  TS +
Sbjct: 228 VAVSMIIIMTSAM 240


>gi|229098111|ref|ZP_04229059.1| hypothetical protein bcere0020_33450 [Bacillus cereus Rock3-29]
 gi|229117129|ref|ZP_04246508.1| hypothetical protein bcere0017_34090 [Bacillus cereus Rock1-3]
 gi|228666297|gb|EEL21760.1| hypothetical protein bcere0017_34090 [Bacillus cereus Rock1-3]
 gi|228685302|gb|EEL39232.1| hypothetical protein bcere0020_33450 [Bacillus cereus Rock3-29]
          Length = 251

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 84/212 (39%), Gaps = 24/212 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         + + + S   S +   
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLMIGGIVGGFGALGSYIGSKFGSLIPAH 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK-----------YIWGMVTGFLSGAL 173
            L+   A    L  I M  +  +   ++ P    +              G+VTG L+G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIMSLNKQQPPLCGQKKLSKNNLMKCICLGLVTGMLAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    +               S G++
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGIGYS------------SEGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           +   +L +L  ++L   +  K +    +  L 
Sbjct: 203 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR 234


>gi|313204527|ref|YP_004043184.1| hypothetical protein Palpr_2062 [Paludibacter propionicigenes WB4]
 gi|312443843|gb|ADQ80199.1| protein of unknown function DUF81 [Paludibacter propionicigenes
           WB4]
          Length = 259

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 53/269 (19%), Positives = 107/269 (39%), Gaps = 35/269 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI-APTSVM 84
           I++   ++G +SGLFG+GGG++MVP L   F        + M  A  TSL  +  P  V+
Sbjct: 5   ILIVGIVAGVMSGLFGIGGGIIMVPSLIAFF-------GMDMLNANATSLAAMLLPVGVL 57

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG-----I 139
             + + + G IN+K        L   +   + +   VD   L+K +A F L +      I
Sbjct: 58  GVISYYKAGYINIKESLWISIGLLAGSFFGAELAISVDVKVLSKLYAAFLLYVAVGYLNI 117

Query: 140 LMLKRDRLYCERKFP--------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA- 190
             L R +     + P          ++  + G+  G ++G  G GGG+    +++ +   
Sbjct: 118 PALFRRKNNSNIENPISGEKIQRSFWIYIVVGIFAGIIAGLFGKGGGLVIVPVLIKFFRY 177

Query: 191 -SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
            +   +  + A +   +  P+++V                G++N     ++    +    
Sbjct: 178 DAKAASATSLAALQLPVGLPSVIVYAQG------------GYLNWIYAGLMALGIVFGVF 225

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             TKL+  +        +++ +   +   
Sbjct: 226 FGTKLAIKLPSTTFKKVYAVFLLGVAVYM 254



 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 6/138 (4%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
           N ++   +S + +     + IV    +G ++GLFG GGGLV+VPVL K F+      S  
Sbjct: 126 NSNIENPISGEKIQRSFWIYIVVGIFAGIIAGLFGKGGGLVIVPVLIKFFRYDAKAASAT 185

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
                     +  P  + S + + + G +N          +       + +   +  +  
Sbjct: 186 SLA------ALQLPVGLPSVIVYAQGGYLNWIYAGLMALGIVFGVFFGTKLAIKLPSTTF 239

Query: 127 NKAFAIFCLLMGILMLKR 144
            K +A+F L + + M+ +
Sbjct: 240 KKVYAVFLLGVAVYMVVK 257



 Score = 39.7 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 14/120 (11%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATS-AGVSALIAFPALLVRI 215
              I G+V G +SG  G+GGGI     ++ F+G  +  A ATS A +   +    ++   
Sbjct: 4   GILIVGIVAGVMSGLFGIGGGIIMVPSLIAFFGMDMLNANATSLAAMLLPVGVLGVISY- 62

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                      +  G++NI   L I    +  +    +L+  +  K L+  ++  +   +
Sbjct: 63  -----------YKAGYINIKESLWISIGLLAGSFFGAELAISVDVKVLSKLYAAFLLYVA 111


>gi|30248483|ref|NP_840553.1| hypothetical protein NE0467 [Nitrosomonas europaea ATCC 19718]
 gi|30138369|emb|CAD84378.1| Domain of unknown function DUF81 [Nitrosomonas europaea ATCC 19718]
          Length = 259

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 51/272 (18%), Positives = 104/272 (38%), Gaps = 37/272 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
               +A  L+G + GL GVGGG +M P+L   F +  +        A+ T L   A T +
Sbjct: 4   WSFTLAGALTGFVIGLTGVGGGALMTPILLLVFGVQPV-------TAVATDLWFAAITKI 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH----VDKSFLNKAFAIFCLLMGI 139
                H  +G ++ +++K          ++  L++S         +L K   I  L+  I
Sbjct: 57  AGARVHHTNGNVDWQVVKRLWSGSLPMALLVVLLVSMGTHITKVDWLTKGIGIVVLITAI 116

Query: 140 LML-----------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF- 187
            +L           KR       +   + +  I G + G       VG G+  ++++L+ 
Sbjct: 117 GLLTAPRMVALARKKRTGQPERFETMQSILTVIAGAILGVCVALTSVGAGVLGSVMLLYL 176

Query: 188 --YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                + ++  AT    +  +A  A L  +++G             V+   ++ +L  S+
Sbjct: 177 YPLRMTPHRLIATDIVHAIPLAVVAGLGYLFAGK------------VDWWMLISLLLGSV 224

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                 + L+  I  +++ I  + ++      
Sbjct: 225 PTVVAGSMLASKITGRWIQIALACVLAAAGLK 256



 Score = 39.3 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 49/119 (41%), Gaps = 5/119 (4%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++A  + G    L  VG G++   +L   + L      +  H  + T +    P +V
Sbjct: 145 ILTVIAGAILGVCVALTSVGAGVLGSVMLLYLYPLR-----MTPHRLIATDIVHAIPLAV 199

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++ + +   G ++  +L   +     T V  S++ S +   ++  A A      G+ +L
Sbjct: 200 VAGLGYLFAGKVDWWMLISLLLGSVPTVVAGSMLASKITGRWIQIALACVLAAAGLKVL 258


>gi|229075562|ref|ZP_04208549.1| hypothetical protein bcere0024_33720 [Bacillus cereus Rock4-18]
 gi|229104207|ref|ZP_04234879.1| hypothetical protein bcere0019_33550 [Bacillus cereus Rock3-28]
 gi|228679224|gb|EEL33429.1| hypothetical protein bcere0019_33550 [Bacillus cereus Rock3-28]
 gi|228707541|gb|EEL59727.1| hypothetical protein bcere0024_33720 [Bacillus cereus Rock4-18]
          Length = 251

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         + + + S   S +   
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLMIGGIVGGFGALGSYIGSKFGSLIPAH 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK-----------YIWGMVTGFLSGAL 173
            L+   A    L  I M  +  +   ++ P    +              G+VTG L+G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIMSRNKQKPPLCGQKKLSKNNLMKCICLGLVTGMLAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    +               S G++
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGIGYS------------SEGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 203 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR--FSMIM 239


>gi|260430369|ref|ZP_05784342.1| membrane protein [Citreicella sp. SE45]
 gi|260418398|gb|EEX11655.1| membrane protein [Citreicella sp. SE45]
          Length = 301

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 107/301 (35%), Gaps = 50/301 (16%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + LI+    + G +SGLFGVGGG ++ P+L       GI  +    V
Sbjct: 1   MHIYLPVAEIPVNLFLIVGLGGVVGIMSGLFGVGGGFILTPLLFFI----GIPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    I  +S    + H R  T+++++    +      + +   + + +        
Sbjct: 53  AVSTQAVQIVASSCSGALAHWRRKTLDIRMGTVLLLGGLAGSTLGVWLFAFLRSLGQIDL 112

Query: 125 FLNKAFAIFCLLMGILMLK-------------------------RDRLYCERKFPDNYVK 159
            +   + +F   +G +M                           + +      +      
Sbjct: 113 AVQLFYVVFLGFIGAMMFFESLNALRGTRKPRRRRHGWGQGWPLKMKFRTSGLYISAIPP 172

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
            + G++ G L+  +GVGGG      M++           TS      ++    ++   + 
Sbjct: 173 LLVGVLCGVLAAIMGVGGGFIMLPAMIYLLKMPTKVVVGTSLFQITFVSVFTTVMHSATN 232

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                        V+I   L++L   ++   + T+    +  + + I  S+++   S   
Sbjct: 233 HT-----------VDIVLALLLLVGGVVGAQIGTRFGARLRGEQVRILLSILVLAVSAKV 281

Query: 279 A 279
           A
Sbjct: 282 A 282


>gi|238791930|ref|ZP_04635566.1| Inner membrane protein yfcA [Yersinia intermedia ATCC 29909]
 gi|238728561|gb|EEQ20079.1| Inner membrane protein yfcA [Yersinia intermedia ATCC 29909]
          Length = 268

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 97/234 (41%), Gaps = 25/234 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ V + L+G +  + G GGGL+ VP L       G+  +      + T+       S  
Sbjct: 13  ILFVVALLAGFIDSIAG-GGGLLTVPALLAV----GLPPAQV----LATNKLQSVGGSFS 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +   R G +N+K  K  I +  + +++ ++++ H+    L +   +  + +G+  L  
Sbjct: 64  ASLYFIRRGAVNLKEQKLIIALTLVGSMLGAILVQHMRADILRQILPLLVIGIGVYFLLT 123

Query: 145 DRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSA 200
            +L     +R+        I G   GF  G  G G G F  L  +   G ++ K+TA + 
Sbjct: 124 PKLGEVDQQRRLSPLPFALIAGGGVGFYDGFFGPGAGSFYALAFVTLCGFNLAKSTAHAK 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            ++       L+  I  G  +     WS+G       L++L   +L   L   +
Sbjct: 184 VLNFTSNLGGLIFFIIGGKVV-----WSIG-------LVMLVGQVLGARLGAHM 225


>gi|228957826|ref|ZP_04119567.1| hypothetical protein bthur0005_13390 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228801908|gb|EEM48784.1| hypothetical protein bthur0005_13390 [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 262

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 110/274 (40%), Gaps = 40/274 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T + 
Sbjct: 1   MLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGLS 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +H  ++ K             ++ S     +++   +  F IF + + IL++ R
Sbjct: 54  STLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGIFLIFVSILLMLR 113

Query: 145 DRLYC---------ERKFPDNYVKYI-----------WGMVTGFLSGALGVGGGIFTNL- 183
           D+L           +R F DN    +              + GF+SG  G+GGG      
Sbjct: 114 DKLKPLSLSNTSVIKRSFTDNDGNTVHYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPA 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +    + A ATS  +  L A  +    I             LG V+    LI++P 
Sbjct: 174 MMLLFAFPAHIAVATSMFIVFLSAIVSSATHIL------------LGNVSWIYALILIPG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   +   ++  +    +     + +      
Sbjct: 222 AWIGGKIGAYINTKLSGNAVINLLRITLIILGTR 255


>gi|89098835|ref|ZP_01171716.1| hypothetical protein B14911_05229 [Bacillus sp. NRRL B-14911]
 gi|89086511|gb|EAR65631.1| hypothetical protein B14911_05229 [Bacillus sp. NRRL B-14911]
          Length = 258

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 106/263 (40%), Gaps = 18/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I +I +  F    +SGL G+GG ++  P+L     L+G+  S   H   G S   + 
Sbjct: 3   IELIIVIFLLGFAGSFISGLLGIGGAIINFPMLLYIPALLGL-ASFTAHEVTGISAVQVL 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++     +R+ G +N  ++      +   +++       + ++ ++  + I  L+  +
Sbjct: 62  FATIGGVWAYRKGGFLNKSLILYMGISILAGSMIGGFGSKFLPEAGISLVYGILALIAAV 121

Query: 140 LMLKRDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYK 194
           +M    +    +  +    + ++      + G  +G +G GG      +ML         
Sbjct: 122 MMFIPKKRIDDVPLDEVVFNKWLAASLAFIVGIGAGIVGAGGAFLLVPIMLAVLKIPTRM 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             A+S  ++ + +  A   +I +G               + A++ ++  S+L +PL    
Sbjct: 182 TIASSLAITFISSIGATAAKISTGQVE-----------YLPALI-MVAASLLASPLGANA 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
                 K L +  ++++F T+  
Sbjct: 230 GKKANTKLLQVILAVLIFATAIK 252


>gi|294500703|ref|YP_003564403.1| hypothetical protein BMQ_3957 [Bacillus megaterium QM B1551]
 gi|294350640|gb|ADE70969.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
          Length = 249

 Score = 77.0 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 28/260 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I++     G + G  G GG   ++ +L+  +        + +HVA+ T+L  +  +S+  
Sbjct: 5   IVLTMLAVGLILGFVGAGGSGFIISILTLLY-------GVSVHVALATALTAMIFSSLSG 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI----LM 141
            + H R G +++K       +  +   + S + S + +  L    A   LL G+     M
Sbjct: 58  AVSHYREGNVSLKSGISVGILGALGAWIGSNLSSFIPEGELKWLTAGMLLLSGVLLWLRM 117

Query: 142 LKRDRLYCERKFPDNYV----KYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
               R   ER  P          + G++TG LSG  G+G   F  L LM+  G SI ++ 
Sbjct: 118 FLFSRQQKERTIPTGAKFVVYSLLIGLITGALSGMFGIGSTPFIQLGLMMVLGLSIRQSA 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T+  V   IA    +     G            F++I  ++ ++  +++ + +  K + 
Sbjct: 178 GTTMLVIIPIAIGGGMGYYQQG------------FLDIPLLIQVVVGTMVGSYIGAKFTN 225

Query: 257 MIGKKYLTIGFSMIMFTTSF 276
            +    L      +   +SF
Sbjct: 226 RVPAPVLKTSLVALPIFSSF 245


>gi|284161668|ref|YP_003400291.1| hypothetical protein Arcpr_0553 [Archaeoglobus profundus DSM 5631]
 gi|284011665|gb|ADB57618.1| protein of unknown function DUF81 [Archaeoglobus profundus DSM
           5631]
          Length = 261

 Score = 77.0 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 88/244 (36%), Gaps = 29/244 (11%)

Query: 45  GLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWI 104
            ++M+P L   F+         + +A+GT++  +  T+    + H +   ++    K   
Sbjct: 28  CVIMLPALVFIFKY-------PLPLAIGTTITAVILTATSGAIAHIKLRNVDYSTAKIVA 80

Query: 105 FVLPITTVVTSLMISHVDKS--FLNKAFAIFCLLMGILML------KRDRLYCERKFPD- 155
               +   V S+   ++      LN       L + I M+      ++       K P  
Sbjct: 81  ISGAVGAAVGSITFFYIANQLWLLNFILGFAFLYVSIRMIYEGIFKRKMPAKTGNKVPGS 140

Query: 156 NYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
            + K + G   G ++G +G+GGG       +   G+ +  A  TS      +A  +   +
Sbjct: 141 RFAKSLIGFFIGIVTGIVGLGGGYALVPSFIYLLGSPVKIAVGTSLASFISMAVVSGAFK 200

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +Y G             V+  A + +   +I+   +  +L+ +     +   F  +    
Sbjct: 201 LYQGV------------VDAIAAICLGIGTIIGAQIGARLTKIFPSWAIKAVFGFVFLYV 248

Query: 275 SFVF 278
           S  F
Sbjct: 249 SLKF 252



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 41/117 (35%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +  F  G ++G+ G+GGG  +VP                + +A+GTSL      +V+S  
Sbjct: 146 LIGFFIGIVTGIVGLGGGYALVPSFIYLL-------GSPVKIAVGTSLASFISMAVVSGA 198

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                G ++            I   + + +        +   F    L + +  + +
Sbjct: 199 FKLYQGVVDAIAAICLGIGTIIGAQIGARLTKIFPSWAIKAVFGFVFLYVSLKFIYQ 255


>gi|57242515|ref|ZP_00370453.1| conserved hypothetical integral membrane protein [Campylobacter
           upsaliensis RM3195]
 gi|57016800|gb|EAL53583.1| conserved hypothetical integral membrane protein [Campylobacter
           upsaliensis RM3195]
          Length = 258

 Score = 77.0 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 71/195 (36%), Gaps = 13/195 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             +   +SG  SGLFG+GGG+++VP +            I  H A+  S+  +   ++  
Sbjct: 3   YFLVGIISGIASGLFGIGGGMIIVPTMLFL--------GISSHQAVAISVVQMIFAAIFG 54

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              + +   +N K          +    +  ++S +    L   F        +      
Sbjct: 55  SYINHKKKNLNFKDGIYIGLGGLLGASFSGTLVSLLSDIVLTAIFLCVSFAFFLKYAFGV 114

Query: 146 RLYCER----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSA 200
           +         KF  N + +  G+ TG  + +LG+GGG+    ++ ++ G    K    S 
Sbjct: 115 KNTTNHTQRSKFVKNAILFGAGVFTGVFAISLGIGGGLLIAPILAYFLGYDNKKVVPISL 174

Query: 201 GVSALIAFPALLVRI 215
                 +   L   I
Sbjct: 175 FFVVFASLAGLFSFI 189


>gi|262366647|gb|ACY63204.1| membrane protein [Yersinia pestis D182038]
          Length = 258

 Score = 77.0 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 95/234 (40%), Gaps = 25/234 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++   + L+G +  + G GGGL+ VP L            +    A+ T+       S  
Sbjct: 3   ILFAVALLAGFIDSIAG-GGGLLTVPALLAV--------GLPPAQALATNKLQSVGGSFS 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +   R G +N+K  K  I +  + +++ ++++ ++    L +   +  + +G+  L  
Sbjct: 54  ASLYFIRRGAVNLKQQKLTIALTLVGSMLGAILVQYMRADILRQILPLLVIGIGVYFLLT 113

Query: 145 DRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSA 200
            RL     +R+        I G   GF  G  G G G F  L  +   G ++ K+TA + 
Sbjct: 114 PRLGVVDQQRRLSALPFALIAGGGIGFYDGFFGPGAGSFYALAFVTLCGFNLAKSTAHAK 173

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            ++       L+  I  G  +     WS+G       L++L   +L   L   +
Sbjct: 174 VLNFTSNLGGLIFFIIGGKVV-----WSIG-------LVMLVGQVLGARLGAHM 215


>gi|228977525|ref|ZP_04137917.1| hypothetical protein bthur0002_7390 [Bacillus thuringiensis Bt407]
 gi|228782169|gb|EEM30355.1| hypothetical protein bthur0002_7390 [Bacillus thuringiensis Bt407]
          Length = 235

 Score = 77.0 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 91/241 (37%), Gaps = 14/241 (5%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           + G+GG ++  P++     L+G       H   G +   +   +      +R+   +N  
Sbjct: 1   MVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVFFATFAGAWAYRKSNDMNKT 59

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV 158
           ++      + I + + S   + +++  +N  +A    +  I+M    +        + ++
Sbjct: 60  LVMYMGASILIGSFIGSFGANILEEHTVNVVYAALATIAAIMMFVPKQNNSGDVKYNKWL 119

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYS 217
             +   V G  SG +G GG      +ML      +    ATS  ++ + +      ++ +
Sbjct: 120 ASLLAFVVGGASGIIGAGGSFLLVPIMLVILKLPLRMTIATSIAITFISSIGITTGKVIT 179

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G             V I A++ I   SI   PL  ++   + +K L    S ++  T+  
Sbjct: 180 GQV-----------VIIPALI-IAVASIFAAPLGARVGKRLNQKVLQYVLSTLIVGTAVK 227

Query: 278 F 278
            
Sbjct: 228 M 228


>gi|86356840|ref|YP_468732.1| hypothetical protein RHE_CH01200 [Rhizobium etli CFN 42]
 gi|86280942|gb|ABC90005.1| hypothetical conserved membrane protein [Rhizobium etli CFN 42]
          Length = 220

 Score = 77.0 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 81/221 (36%), Gaps = 15/221 (6%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
               G+  +    +   T +     T+  S + H  H  ++ +++        I   + +
Sbjct: 11  LLAFGVPAANASAMTHVTEM----FTTAASGISHAYHRNVDWRLVARLAPAGMIGGAIGA 66

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGV 175
            +++++D   +    + + + +G+L+L +       +   +++    G   G L    G 
Sbjct: 67  YLLANIDGKVVEPFVSAYLIAIGLLILFKAFRPRPTREVRDWIVPPVGFFGGLLDAIGGG 126

Query: 176 GGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           G G      ++  G  + +   ++      +     L  I            +LG+  + 
Sbjct: 127 GWGPVVTSTLVGRGHDLKRVIGSTNFTEFAVTLTISLTFIL-----------TLGWSELN 175

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           + + ++   ++  P    L   +  + L +  SM++ TTS 
Sbjct: 176 SAIGLIIGGVIAAPFGAMLVKRLPVRALMVAVSMVIITTSA 216


>gi|149913247|ref|ZP_01901781.1| integral membrane protein, putative [Roseobacter sp. AzwK-3b]
 gi|149813653|gb|EDM73479.1| integral membrane protein, putative [Roseobacter sp. AzwK-3b]
          Length = 305

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 46/278 (16%), Positives = 99/278 (35%), Gaps = 54/278 (19%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG +M P+L       GI  +    VA+ T    I  +S    + H R  T++
Sbjct: 28  SGMFGVGGGFLMTPLLFFI----GIPPA----VAVATEANQIVASSFSGVLAHLRRKTVD 79

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFCLLMGILMLK-------- 143
           +++    +    +   +  ++ +++         +   + +F  ++G +M          
Sbjct: 80  LRMGTVLLIGGLVGAALGVVVFNYLKSMGQVDLLVKLCYVVFLGVIGGMMFFESLRAIRQ 139

Query: 144 ---------RDRLYCERKFP------------DNYVKYIWGMVTGFLSGALGVGGGIFTN 182
                    R +       P                  + G+  G L+  +GVGGG    
Sbjct: 140 TRSGKVVPKRKKHNWIHGLPFKMRFRTSGLYISVIPPLLVGVSVGILAAIMGVGGGFIMV 199

Query: 183 LLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
             M++  G        TS      +     ++   + +            V++   +++L
Sbjct: 200 PAMIYLLGMPTKVVVGTSLFQIIFVTAFTTMLHATTNFT-----------VDVALAVLLL 248

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              ++   + T++   +  + L I  +M++    F  A
Sbjct: 249 IGGVIGAQIGTQIGTKMKAEQLRILLAMMVLAVCFKLA 286



 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G L+ + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 177 LLVGVSVGILAAIMGVGGGFIMVPAMIYLL-------GMPTKVVVGTSLFQIIFVTAFTT 229

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H     T+++ +    +    I   + + + + +    L    A+  L +   +    
Sbjct: 230 MLHATTNFTVDVALAVLLLIGGVIGAQIGTQIGTKMKAEQLRILLAMMVLAVCFKLAFDL 289

Query: 146 RLYCER 151
            L    
Sbjct: 290 LLQPSE 295


>gi|320450895|ref|YP_004202991.1| hypothetical protein TSC_c18280 [Thermus scotoductus SA-01]
 gi|320151064|gb|ADW22442.1| putative domain of unknown function [Thermus scotoductus SA-01]
          Length = 248

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+ GVGGG +MVP +            +  H A GTSL  + P S++    H R G ++
Sbjct: 143 SGMMGVGGGTIMVPAMVLVL-------GMDQHTAQGTSLLAMVPASLVGAYTHHRLGNVD 195

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
             +    +  + + T +       + ++ L   FA+  L      L+  
Sbjct: 196 TLLAPSLVPGVLLGTFLGGEAAHFLPEATLRLVFAMVLLWTSWRYLRPS 244



 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 95/238 (39%), Gaps = 24/238 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            VM+P++    +L         H A GTSL  +  T +M  + +   G++++K       
Sbjct: 22  TVMIPLMVGILRL-------SQHKAHGTSLVAVFFTGLMGALTYGLQGSLSLKAALFLAA 74

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV----KYI 161
              +T  + +     + +  L +AF  F L + +L+L +  L                 +
Sbjct: 75  TAILTARLGARYAHSLAEKDLKRAFGFFLLFVSLLLLLKPYLAPVGLVRGEVWEDLTLLL 134

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G +TGFLSG +GVGGG      M+   G   + A  TS       +             
Sbjct: 135 AGGLTGFLSGMMGVGGGTIMVPAMVLVLGMDQHTAQGTSLLAMVPASLVGAYT------- 187

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                   LG V+      ++P  +L T L  + ++ + +  L + F+M++  TS+ +
Sbjct: 188 -----HHRLGNVDTLLAPSLVPGVLLGTFLGGEAAHFLPEATLRLVFAMVLLWTSWRY 240


>gi|258512604|ref|YP_003186038.1| hypothetical protein Aaci_2645 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479330|gb|ACV59649.1| protein of unknown function DUF81 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 261

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 99/263 (37%), Gaps = 19/263 (7%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +    ++   F    L+G+ GVGG +V  P+L     L+G+       VA G S   +  
Sbjct: 4   EMFVTLLAIGFAGSVLAGMVGVGGAIVKYPLLLYLPPLLGVGAFTAHQVA-GISSVQVLC 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   +R+ G ++ +++ D    +   + V + M     +S +N  +A+      ++
Sbjct: 63  ASFAAMWAYRKSGYLHPRLIADMGLAMLAGSFVGAYMAHFYTESVVNLVYAVLATAATLI 122

Query: 141 MLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYK 194
           ML+       R   D       +    G + G  SG +G  G      ++L         
Sbjct: 123 MLRPSASDELRGGVDEIAYPRPLAAGLGALVGLFSGVVGSAGAFLLMPILLGVLRIPTRV 182

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A A+S  V+ + +    +              W+   V  G  L++   S +  PL  +L
Sbjct: 183 AIASSIAVTFVASLGGFVG------------KWAAHEVMWGPALVLAWASAVGAPLGVRL 230

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  ++L    + ++  T   
Sbjct: 231 GRRVHARWLRWLLAGLIAATCVR 253



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 7/113 (6%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             L G  SG+ G  G  +++P+L    +       I   VA+ +S+ V    S+  F+  
Sbjct: 150 GALVGLFSGVVGSAGAFLLMPILLGVLR-------IPTRVAIASSIAVTFVASLGGFVGK 202

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                +         +   +   +   +   V   +L    A       + + 
Sbjct: 203 WAAHEVMWGPALVLAWASAVGAPLGVRLGRRVHARWLRWLLAGLIAATCVRIW 255


>gi|329924931|ref|ZP_08279878.1| putative membrane protein [Paenibacillus sp. HGF5]
 gi|328940315|gb|EGG36644.1| putative membrane protein [Paenibacillus sp. HGF5]
          Length = 260

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 103/266 (38%), Gaps = 18/266 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  + +I  I +  F+   +SG+ G+GG ++  P+L     L G+  +   H   G S  
Sbjct: 2   ELSISFIITIFLIGFIGSYISGMVGIGGSIIKYPMLLYIPSLFGL-AAFTAHEVSGISAV 60

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   ++     +R+ G +N  ++      + + + +       + +  +N  + I  L+
Sbjct: 61  QVFFATIGGVWAYRKGGYLNKTLIIYMGSAILLGSFIGGFGSKMMSEGGINLIYGILALI 120

Query: 137 MGILMLKRDR-----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
             ++M   ++        + KF       +  +V          G  +   ++++     
Sbjct: 121 AAVMMFIPNKGVDDIPLDQVKFNKWLAAALALVVGIGAGIVGAAGAFLLVPIMLVVLKIP 180

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
                ATS  ++ + +  + + ++ +G               I A++ ++  S++ +PL 
Sbjct: 181 TRMTIATSLAITFISSIGSTVGKLTTGQVD-----------YIPALI-MVVASLIASPLG 228

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
                 +  K L I  ++++  T+  
Sbjct: 229 AAAGKKMNTKILQIILAVLILATAIK 254



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 35/99 (35%), Gaps = 7/99 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            ++VP++    +       I   + + TSL +   +S+ S +     G ++       + 
Sbjct: 167 FLLVPIMLVVLK-------IPTRMTIATSLAITFISSIGSTVGKLTTGQVDYIPALIMVV 219

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              I + + +     ++   L    A+  L   I +   
Sbjct: 220 ASLIASPLGAAAGKKMNTKILQIILAVLILATAIKIWLD 258


>gi|294792491|ref|ZP_06757638.1| putative membrane protein [Veillonella sp. 6_1_27]
 gi|294456390|gb|EFG24753.1| putative membrane protein [Veillonella sp. 6_1_27]
          Length = 264

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 94/272 (34%), Gaps = 28/272 (10%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            D +V +     +  FL+  +  + G GGGLV VP+    F            + +GTSL
Sbjct: 2   IDNIVVFYIFFTIVGFLAAMIGTIIGAGGGLVFVPLFMYWF------PEWSPSMIVGTSL 55

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
             +   ++   + + +   + +     +        ++ + M           AF  F L
Sbjct: 56  FSVMCNAISGSIAYLKQKKVYINAAIVFSLATFPGAILGAQMSGWFSGKGFMFAFGCFML 115

Query: 136 LMGILMLKRDRLYCERKFP---------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
              +L+  ++    ERK              +        GF+S   G+GGG+     ++
Sbjct: 116 CASVLIGFKNFRKGERKEESLTLEQLSYSKPIGISISFFVGFISSIFGIGGGLIHVPALI 175

Query: 187 FY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           +  G   + ATATS  + A+     ++  +                +     +     +I
Sbjct: 176 YLMGFPTHMATATSQSILAVSTTVGVITHLIES------------HIIFSIAIPTSIGAI 223

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               +  +++  +  K +    S+ +F  +  
Sbjct: 224 FGAQVGARIAKRLKAKAILALMSIAVFALAVR 255



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 7/123 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           + I  SF  G +S +FG+GGGL+ VP L               H+A  TS  ++A ++ +
Sbjct: 147 IGISISFFVGFISSIFGIGGGLIHVPALIYLMGF-------PTHMATATSQSILAVSTTV 199

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + H     I   I             V + +   +    +    +I    + + ++ +
Sbjct: 200 GVITHLIESHIIFSIAIPTSIGAIFGAQVGARIAKRLKAKAILALMSIAVFALAVRLILK 259

Query: 145 DRL 147
             +
Sbjct: 260 SGI 262


>gi|325955348|ref|YP_004239008.1| hypothetical protein Weevi_1738 [Weeksella virosa DSM 16922]
 gi|323437966|gb|ADX68430.1| protein of unknown function DUF81 [Weeksella virosa DSM 16922]
          Length = 265

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 104/264 (39%), Gaps = 34/264 (12%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
            +   G + GL G GG ++ VP+L+  F            VA   SL ++  TS++  ++
Sbjct: 11  GALFIGIVLGLMGGGGSILAVPILAYLFHFDE-------KVATAYSLFIVGSTSLVGGIK 63

Query: 89  HRRHGTINMKILKDWIFVLPIT-TVVTSLMISHVDKSF-------------LNKAFAIFC 134
                 ++ + +  +     I  +++ + ++ ++ ++              +   F+I  
Sbjct: 64  QALKKMVDWRAVLIFGLPAVIGISIIRTFVVPNLPENLFHVGQYIVTRRMAMFGLFSILM 123

Query: 135 LLMGILMLKRDR-LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           L     +L  ++    ++K   + +    G   G L+G +G GGG      LM+     I
Sbjct: 124 LFAAFSLLSDNKGPRRKQKSKFHPLLLSEGFFIGCLTGLVGAGGGFLIVPALMVIAQLDI 183

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A+ATS     +I+  +L+                   ++ G +L  + +S++   L T
Sbjct: 184 KHASATSL---FIISINSLIGFFIGDVHHLT--------IDWGFLLEFVFLSMIGILLGT 232

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSF 276
             S  I  + L   F++ +   + 
Sbjct: 233 FFSTKISTETLKKSFAIFIILMAI 256



 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L++   F  G L+GL G GGG ++VP L    QL        +  A  TSL +I+  S++
Sbjct: 148 LLLSEGFFIGCLTGLVGAGGGFLIVPALMVIAQLD-------IKHASATSLFIISINSLI 200

Query: 85  SFM-EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            F      H TI+   L +++F+  I  ++ +   + +    L K+FAIF +LM I +  
Sbjct: 201 GFFIGDVHHLTIDWGFLLEFVFLSMIGILLGTFFSTKISTETLKKSFAIFIILMAIFIFL 260


>gi|229157253|ref|ZP_04285333.1| hypothetical protein bcere0010_34370 [Bacillus cereus ATCC 4342]
 gi|228626317|gb|EEK83064.1| hypothetical protein bcere0010_34370 [Bacillus cereus ATCC 4342]
          Length = 272

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 58/274 (21%), Positives = 113/274 (41%), Gaps = 27/274 (9%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLF-GVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           M+F+  +  + +I  ++   +++  ++ L  G+  G V          ++ +   I +HV
Sbjct: 1   MLFICVEERIWWIIALLEGEYVAIIITMLVMGILLGFVGAGGAGFIIAILTLVFHIPIHV 60

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ TSL  +A T++   + H R G + + I           + + S + S + +  L+  
Sbjct: 61  ALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSLIPRHLLHWF 120

Query: 130 FAIFCLLMGILMLKRDRLYCERKFP-----------DNYVKYIWGMVTGFLSGALGVGGG 178
            A    L  I M  +   +  R+             +       G+VTG ++G+ G+G  
Sbjct: 121 TAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGMMAGSFGIGSA 180

Query: 179 IFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
            F  L LM+  G +I ++  T+  V   IA    L               S G+++   +
Sbjct: 181 PFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYLDHILL 228

Query: 238 LIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           L +L  ++L   +  K +    + +L   FSMIM
Sbjct: 229 LQVLIGTMLGAYIGAKFTNYAPRMFLK--FSMIM 260


>gi|224476019|ref|YP_002633625.1| hypothetical protein Sca_0526 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222420626|emb|CAL27440.1| putative membrane protein [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 274

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 86/249 (34%), Gaps = 33/249 (13%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P +        +   I   +A+GTS  ++  T + S + + +   +++K    ++  L  
Sbjct: 31  PTMVYFGVEHHLLTGITPQIAIGTSSIILIVTGLTSTLGYMKSKQVDIKNGYIFLIGLLP 90

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN------------- 156
            ++V SL+  ++     N  F IF + + I+++ R  +     F                
Sbjct: 91  GSLVGSLLSRYLTLDSFNLYFGIFLIFVSIILMVRYYIKPISLFEKKKYERTYIANDGTT 150

Query: 157 -------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                     +      G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 151 YHYHVPPVFAFFATFGIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 210

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            + +  I+             G V     ++++  S     L  K++  I    + +   
Sbjct: 211 MSSIGHIFQ------------GHVAWHYAIVLVISSYFGAKLGVKINQSIQSNTVVVLLR 258

Query: 269 MIMFTTSFV 277
            +M      
Sbjct: 259 TVMLLMGIY 267



 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 7/122 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
                A+F  G L+GLFG+GGG +M P++   F+          HVA+GTS+ +I  +SV
Sbjct: 158 VFAFFATFGIGILTGLFGIGGGALMTPLMLIVFRF-------PPHVAVGTSMMMIFFSSV 210

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           MS + H   G +        +        +   +   +  + +        LLMGI ++ 
Sbjct: 211 MSSIGHIFQGHVAWHYAIVLVISSYFGAKLGVKINQSIQSNTVVVLLRTVMLLMGIYLII 270

Query: 144 RD 145
           + 
Sbjct: 271 KS 272


>gi|126652020|ref|ZP_01724209.1| hypothetical protein BB14905_11255 [Bacillus sp. B14905]
 gi|126591110|gb|EAZ85220.1| hypothetical protein BB14905_11255 [Bacillus sp. B14905]
          Length = 274

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 85/230 (36%), Gaps = 33/230 (14%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P        +G+   I     +G S+ ++  T + S + + +  T++ K    +      
Sbjct: 30  PATLYIGLNLGMIPDITPQKVVGLSVVMMIFTGLASTLSYMKSKTVDYKTGYIFFIGSIP 89

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK---------- 159
            +++ + +   +D    N  F I  +++ I++L RD+L   + F  N ++          
Sbjct: 90  GSILGAWVNKGLDLPSFNLYFGILLIILSIILLVRDKLKPVKWFVKNGLQQEFTDAEGKT 149

Query: 160 ----------YIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAF 208
                      ++    GF SG  G+GGG      M + +    + A ATS  +  L + 
Sbjct: 150 FVYGYPIWFAILFTFGVGFASGLFGIGGGSMIVPAMIILFLFPPHVAVATSMFLVFLTSL 209

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 +Y            LG V     + ++P + +   L   L+  I
Sbjct: 210 VNTASHVY------------LGHVPWLYTIPVIPGAFIGAKLGAALNKKI 247



 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 7/102 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I+ +F  G  SGLFG+GGG ++VP +   F           HVA+ TS+ ++  TS
Sbjct: 156 IWFAILFTFGVGFASGLFGIGGGSMIVPAMIILFLF-------PPHVAVATSMFLVFLTS 208

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +++   H   G +        I    I   + + +   +   
Sbjct: 209 LVNTASHVYLGHVPWLYTIPVIPGAFIGAKLGAALNKKIKSD 250


>gi|227547040|ref|ZP_03977089.1| integral membrane protein [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|227212457|gb|EEI80346.1| integral membrane protein [Bifidobacterium longum subsp. infantis
           ATCC 55813]
          Length = 274

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 94/242 (38%), Gaps = 24/242 (9%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
           FG+GGG ++VP L            +    A  TS+  I PTSV   + +   G ++   
Sbjct: 42  FGIGGGTIIVPALVWL--------GLTQRHAAATSMLAIVPTSVSGVLAYAVEGNVDWIA 93

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG---ILMLKRDRLYCERKFPDN 156
                  + I   + SL++S + +  L  AF +F   +    ++ +       E      
Sbjct: 94  ALLMFLGMFIGGQIGSLLLSRLPEVVLRWAFVVFMAFIIVSQLIFIPSRDSSIEFNLVTV 153

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRI 215
            +  ++G++ G L+G LGVGGG      + + +GAS   A  TS       A    +  +
Sbjct: 154 LLMIVFGVLAGILAGLLGVGGGAICVPALSILFGASDLIARGTSLLSMFPNAMTTTVANV 213

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                           V+  A LII  ++ L  PL T ++  +  +   I F+  +    
Sbjct: 214 RRKM------------VHAKAGLIIGIVAALTAPLGTWIAGAMSPRAGGILFATYLTVLL 261

Query: 276 FV 277
             
Sbjct: 262 IR 263


>gi|156973846|ref|YP_001444753.1| hypothetical protein VIBHAR_01556 [Vibrio harveyi ATCC BAA-1116]
 gi|156525440|gb|ABU70526.1| hypothetical protein VIBHAR_01556 [Vibrio harveyi ATCC BAA-1116]
          Length = 261

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 92/267 (34%), Gaps = 29/267 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+    + 
Sbjct: 7   TMLLVLALVAFVAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAASF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + R      +          I   + +L +  +   +L K   +  L   + 
Sbjct: 58  ASSTAAFTYYRKRLFKPQCWGRAFLATLIGATLGTLFVDAISTEWLEKVLPLIILAAAMY 117

Query: 141 MLKRDRLYCERKFPD-------NYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASI 192
            +         + P        N  +Y  G   GF  G  G G G F T   M  Y  +I
Sbjct: 118 TVFHKTPQSTHQSPTPEPCPMLNKKQYAQGFTIGFYDGLAGPGTGAFWTVSSMALYRLNI 177

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A+  +  ++    F +L+                LG +N    L +    +    +  
Sbjct: 178 LLASGLAKAMNFTSNFTSLITFAV------------LGHINWVLGLTMGVCLMAGAFIGA 225

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             +   G K++   F  ++   +   A
Sbjct: 226 HSAIRFGSKFIRPVFVTVVSVLAIKLA 252


>gi|154685065|ref|YP_001420226.1| YdhB [Bacillus amyloliquefaciens FZB42]
 gi|154350916|gb|ABS72995.1| YdhB [Bacillus amyloliquefaciens FZB42]
          Length = 252

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 60/251 (23%), Positives = 102/251 (40%), Gaps = 28/251 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I LII+  FL G + G  G GG   ++ +L+  F        + +H A+GTSL  +A TS
Sbjct: 5   IVLIILVMFLLGIILGFIGAGGAGFVIALLTILFH-------VPIHTALGTSLAGMAFTS 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +     H R G I MKI           +   + + S +    L+   A    L  +L+L
Sbjct: 58  LSGAFSHYREGNIQMKIGLIVGVFAAFGSFFGARLTSLIPADLLHYLTAGMLFLSALLIL 117

Query: 143 KRDRLYCERK--------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIY 193
            R  +  E +                + G++ G LSG  G+G   F  + LM+    SI 
Sbjct: 118 VRLFIVKETQEDSGQQSNLNIWVKAVVLGVIAGILSGTFGIGSAPFIQIGLMILLRLSIR 177

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           ++  T+  V   +A    L  +            + GFV+   ++ +L  ++    +  K
Sbjct: 178 QSVGTTMLVIIPLAVGGGLGYV------------TEGFVDYMLLVKVLIGTMCGAYVGAK 225

Query: 254 LSYMIGKKYLT 264
            + ++ K  L 
Sbjct: 226 FTNLVPKVILK 236



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 53/129 (41%), Gaps = 7/129 (5%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
            +   ++     +V   ++G LSG FG+G    +   L    +L        +  ++GT+
Sbjct: 131 GQQSNLNIWVKAVVLGVIAGILSGTFGIGSAPFIQIGLMILLRL-------SIRQSVGTT 183

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           + VI P +V   + +   G ++  +L   +        V +   + V K  L  A  +  
Sbjct: 184 MLVIIPLAVGGGLGYVTEGFVDYMLLVKVLIGTMCGAYVGAKFTNLVPKVILKSAIFLTP 243

Query: 135 LLMGILMLK 143
            + G+++L 
Sbjct: 244 AIAGLMLLF 252


>gi|296110128|ref|YP_003617077.1| protein of unknown function DUF81 [Methanocaldococcus infernus ME]
 gi|295434942|gb|ADG14113.1| protein of unknown function DUF81 [Methanocaldococcus infernus ME]
          Length = 249

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 25/257 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+  FL GT+ GL G+GGG++M P+L            +   +A+GT L     T  +S
Sbjct: 6   FIILGFLVGTIVGLTGIGGGVLMTPLLIFL--------GVEPLIAVGTDLLYATATKGLS 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD----KSFLNKAFAIFCLLMGILM 141
              H + G ++ KI     F      ++  L++  ++     +FL    A+  +L  ++ 
Sbjct: 58  SYLHNKKGNVDKKIALKLFFGTFPAVLLGGLILRMINRDIINNFLTAMLAVILILTSLIN 117

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSA 200
           LK++    ++K   +Y+   +G V G +     VG G+     LM F   S      TS 
Sbjct: 118 LKKEFFIFKKKVNSSYILVFFGFVVGLVVQFTSVGSGVLITFALMNFTDLSPKCIVGTSL 177

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
               L+ F + L  I             LG VN   VL ++  +I    L   L+Y +  
Sbjct: 178 FYGLLLTFVSSLNYI------------DLGLVNYFLVLSLIVGTIPGVFLGVYLNYKLHP 225

Query: 261 KYLTIGFSMIMFTTSFV 277
           KYL    S+++      
Sbjct: 226 KYLRKLISIMILFFGVY 242



 Score = 36.2 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 46/125 (36%), Gaps = 7/125 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V+   +++   F+ G +     VG G+++   L            +     +GTSL    
Sbjct: 129 VNSSYILVFFGFVVGLVVQFTSVGSGVLITFALMNF-------TDLSPKCIVGTSLFYGL 181

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             + +S + +   G +N  ++   I        +   +   +   +L K  +I  L  G+
Sbjct: 182 LLTFVSSLNYIDLGLVNYFLVLSLIVGTIPGVFLGVYLNYKLHPKYLRKLISIMILFFGV 241

Query: 140 LMLKR 144
            +L  
Sbjct: 242 YLLFN 246


>gi|304558789|gb|ADM41453.1| hypothetical protein ETAF_1341 [Edwardsiella tarda FL6-60]
          Length = 249

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 93/248 (37%), Gaps = 13/248 (5%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT- 94
           LS LFG+GGG+V+VPVL   F    +       +   TSL V+  T+ ++ +   R    
Sbjct: 2   LSALFGLGGGIVLVPVLHVLFPHCEV------QLLAATSLSVVMLTAFINVLAFWRQQAR 55

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
            + ++L  W   +     +   +   +    +   FA   LLM +  L+R R        
Sbjct: 56  PDTRLLIWWALGVSAGMQLGVHISFLLPGKAILLIFAAILLLMALRNLRRPRQVAATAMS 115

Query: 155 DNYVK---YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
               +          G ++G  G+GGG     L+    A   +  A       L+     
Sbjct: 116 PRCTRNRGLGLCFAGGTVAGITGLGGGSVLAPLLSLLPAIPRRQVAVYCNWLLLLGSAVT 175

Query: 212 LVRIYSGWGLNGLP---PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
           +          G      W  G+VN+  VL +   ++L  PLA +L   + +      FS
Sbjct: 176 VTTYLLRTPPTGAVLPGDWQFGYVNLSVVLPVFSCALLTQPLAMRLRRQMSEARQRQAFS 235

Query: 269 MIMFTTSF 276
            ++   + 
Sbjct: 236 AVLSGMAL 243


>gi|229191158|ref|ZP_04318147.1| hypothetical protein bcere0002_28220 [Bacillus cereus ATCC 10876]
 gi|228592308|gb|EEK50138.1| hypothetical protein bcere0002_28220 [Bacillus cereus ATCC 10876]
          Length = 336

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 93/276 (33%), Gaps = 23/276 (8%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
             S    ++    +  + +  +  F +  + G  G+  G V    L   F +     S  
Sbjct: 24  KVSFSFIITGGLFMQKLIVFAIIGFFAQLIDGALGMAYG-VTSSSLLLMFGIAPAVASAS 82

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +H+A          T+  S   H + G ++   +        I   V +  +S++    +
Sbjct: 83  VHLAE-------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVI 135

Query: 127 NKAFAIFCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
               ++F   +G+ +L R     ++    K          G+  GF+    G G G  T 
Sbjct: 136 KPYISVFLFTLGVYILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITT 195

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIIL 241
            ++L  G    K   +       ++  A +    S GW            V+   V  ++
Sbjct: 196 PVLLARGNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALM 245

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              I+  P+A  L  ++    L +    ++  T+  
Sbjct: 246 LGGIVAAPIAAWLVRIVPPHLLGVLVGGLIIFTNIR 281


>gi|228986764|ref|ZP_04146893.1| hypothetical protein bthur0001_34400 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228772936|gb|EEM21373.1| hypothetical protein bthur0001_34400 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 267

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I           + + S + S +   
Sbjct: 51  IPIHVALATSLTAMAFTTLSGVISHHREGNVVLTIGGIVGGCGAFGSYIGSKIGSLIPPY 110

Query: 125 FLNKAFAIFCLLMGILM---LKRDRLYCERKF--------PDNYVKYIWGMVTGFLSGAL 173
            L+   A    L  I M   L + +   E +          +       G+VTG ++G+ 
Sbjct: 111 LLHWFTAGMLFLSAIFMCIKLIKFQNKEEVRLVKIKDISKENIMKCICLGLVTGMMAGSF 170

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 171 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 218

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 219 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK--FSMIM 255



 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I    ++G ++G FG+G    +   L            + +  ++GT++ VI P +
Sbjct: 153 IMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTMLVILPIA 205

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           +   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 206 IGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK 250


>gi|167032449|ref|YP_001667680.1| hypothetical protein PputGB1_1437 [Pseudomonas putida GB-1]
 gi|166858937|gb|ABY97344.1| protein of unknown function DUF81 [Pseudomonas putida GB-1]
          Length = 261

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 81/228 (35%), Gaps = 17/228 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++          +   + 
Sbjct: 41  AIPALGVLFGLDQQLAQGTALVMVVPNVLLALWRYHQRNRIELRHAVPLSACSFLFAWLG 100

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGI----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           S+    +D   +   F  F + + +     M  +                + G   G + 
Sbjct: 101 SIWAVGLDAHSMRLGFVGFLVALAVWNVARMFMKVSPPSAELRYAWPWLGVLGSFAGTMG 160

Query: 171 GALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G  GVGG +    ++   +G +   A   S  ++A      L+       G++    W +
Sbjct: 161 GLFGVGGAVVATPILTSVFGTTQVVAQGLSLALAAPSTLVTLVTY-----GVHHSVDWGV 215

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G       + +    +L      KL++ + +K L   F + +   + +
Sbjct: 216 G-------IPLAVGGLLSISWGVKLAHALPEKVLRAMFCVFLVVCAVM 256



 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 54/117 (46%), Gaps = 7/117 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            + V    +GT+ GLFGVGG +V  P+L+  F            VA G SL + AP++++
Sbjct: 148 WLGVLGSFAGTMGGLFGVGGAVVATPILTSVF-------GTTQVVAQGLSLALAAPSTLV 200

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + + +  H +++  +         ++      +   + +  L   F +F ++  +++
Sbjct: 201 TLVTYGVHHSVDWGVGIPLAVGGLLSISWGVKLAHALPEKVLRAMFCVFLVVCAVML 257


>gi|163802092|ref|ZP_02195988.1| hypothetical protein 1103602000573_AND4_03704 [Vibrio sp. AND4]
 gi|159174233|gb|EDP59041.1| hypothetical protein AND4_03704 [Vibrio sp. AND4]
          Length = 261

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 94/267 (35%), Gaps = 29/267 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F++G +  + G GGG++ VP L            +  HVA+GT+    + 
Sbjct: 7   TMLLVLALVAFVAGFIDAVAG-GGGMLTVPALLSL--------GLPPHVALGTNKLAASF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + +      +          I   + +L++  +   +L KA  +  L   + 
Sbjct: 58  ASSTAAFTYYKKRLFKPQCWGRAFISTLIGATLGTLLVDAISTEWLEKALPLIILAAAMY 117

Query: 141 MLKRDRLYCERKFPD-------NYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASI 192
            +         + P        N  +Y  G   GF  G  G G G F T   M  Y  +I
Sbjct: 118 TVFHKTPQSTNQSPTPEPCPMLNRKQYAQGFTIGFYDGLAGPGTGAFWTVSSMALYRMNI 177

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A+  +  ++    F +L+                LG +N    L +    +    +  
Sbjct: 178 LLASGLAKAMNFTSNFTSLITFAV------------LGHINWLLGLTMGLCLMAGAFVGA 225

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             +   G K++   F  ++   +   A
Sbjct: 226 HSAIRFGSKFIRPVFVTVVSVLAIKLA 252


>gi|254462630|ref|ZP_05076046.1| permease [Rhodobacterales bacterium HTCC2083]
 gi|206679219|gb|EDZ43706.1| permease [Rhodobacteraceae bacterium HTCC2083]
          Length = 276

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 95/276 (34%), Gaps = 54/276 (19%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           +FGVGGG +M P+L       GI  +    VA+ T    I  +S    + H +  +++ +
Sbjct: 1   MFGVGGGFLMTPLLFFI----GIPPA----VAVATEANQIVASSFSGVLAHVKRKSVDFR 52

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFCLLMGILML----------- 142
           +    +    +   +  L+ +++         +   + +F  ++G LM            
Sbjct: 53  MGTVLLIGGLVGAALGVLVFNYLKSMGQVDLLVKLCYVLFLGIIGALMFVESLNAIRKSK 112

Query: 143 ------------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
                              + R      +       I G+  G L+  +GVGGG      
Sbjct: 113 KPGSAPKRKQRGWIHALPFKMRFRTSGLYISVIPPLIVGVCVGILAAIMGVGGGFIMVPA 172

Query: 185 MLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           M++  G        TS      +     L+   + +            V++   +++L  
Sbjct: 173 MIYLLGMPTKVVVGTSLFQIIFVTAFTTLLHATTNFT-----------VDMVLAVLLLVG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +    + T++   +  + L I  ++++ T     A
Sbjct: 222 GVFGAQIGTRIGTKLKAEQLRILLAIMVLTVCGKLA 257



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G L+ + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 148 LIVGVCVGILAAIMGVGGGFIMVPAMIYLL-------GMPTKVVVGTSLFQIIFVTAFTT 200

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           + H     T++M +    +        + + + + +    L    AI  L +   +    
Sbjct: 201 LLHATTNFTVDMVLAVLLLVGGVFGAQIGTRIGTKLKAEQLRILLAIMVLTVCGKLAFDL 260

Query: 146 RLYCER 151
            +    
Sbjct: 261 LVMPSE 266


>gi|145221576|ref|YP_001132254.1| hypothetical protein Mflv_0983 [Mycobacterium gilvum PYR-GCK]
 gi|145214062|gb|ABP43466.1| protein of unknown function DUF81 [Mycobacterium gilvum PYR-GCK]
          Length = 291

 Score = 77.0 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 93/260 (35%), Gaps = 23/260 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + L +  +   G   GL G GG ++ VP+L+           +    A+ TSL V+  T
Sbjct: 1   MMALTVGLAVFVGIALGLLGGGGSILTVPLLAYV-------AGMDAKQAIATSLLVVGVT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S +  + H R G +  +    +            L+   +  + L   FA+  +   + M
Sbjct: 54  SAIGAVSHARAGRVQWRTGLIFGAAGMAGAYAGGLLARFIPGTVLLIGFALMMIATAVAM 113

Query: 142 LKRDR---LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATA 197
           L+  +                   G++ G ++G +G GGG      +    G  +  A  
Sbjct: 114 LRGRKNVQATEGSHRLPVPKILAEGLLVGLVTGLVGAGGGFLVVPALALLGGLPMPVAVG 173

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS  V A+ +F  L   + S              ++    L +   +++   L  +L+ M
Sbjct: 174 TSLIVIAMKSFAGLGGYLSSVQ------------IDWSLALAVTAAAVVGALLGARLTSM 221

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           +    L   F   +   S V
Sbjct: 222 VNPDSLRKAFGWFVLAMSSV 241



 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 7/120 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I+    L G ++GL G GGG ++VP L+           + M VA+GTSL VIA  S   
Sbjct: 134 ILAEGLLVGLVTGLVGAGGGFLVVPALALL-------GGLPMPVAVGTSLIVIAMKSFAG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +     I+  +         +  ++ + + S V+   L KAF  F L M  ++L ++
Sbjct: 187 LGGYLSSVQIDWSLALAVTAAAVVGALLGARLTSMVNPDSLRKAFGWFVLAMSSVILAQE 246


>gi|228921724|ref|ZP_04085041.1| hypothetical protein bthur0011_27210 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228837936|gb|EEM83260.1| hypothetical protein bthur0011_27210 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 336

 Score = 76.6 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 93/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G V    L   F +     S  +H+A  
Sbjct: 30  IITGGFFMQKLIVFAIIGFFAQLIDGALGMAYG-VTSSSLLLMFGIAPAVASASVHLAE- 87

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   V +  +S++    +    ++
Sbjct: 88  ------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISV 141

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R     ++   +K          G+  GF+    G G G  T  ++L  
Sbjct: 142 FLFTLGVYILLRFIIQKQIVASKKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLAR 201

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       ++  A +    S GW            V+   V  ++   I+ 
Sbjct: 202 GNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALMLGGIVA 251

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  ++    L +    ++  T+  
Sbjct: 252 APIAAWLVRIVPAHLLGVLVGGLIIFTNIR 281


>gi|157371609|ref|YP_001479598.1| hypothetical protein Spro_3372 [Serratia proteamaculans 568]
 gi|157323373|gb|ABV42470.1| protein of unknown function DUF81 [Serratia proteamaculans 568]
          Length = 266

 Score = 76.6 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 99/238 (41%), Gaps = 25/238 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + ++ V + L+G +  + G GGGL+ VP L            +    A+ T+      
Sbjct: 9   EMLGVLFVVALLAGFIDSIAG-GGGLLTVPALLAV--------GVSPAQALATNKLQSVG 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S+ + +   R   +++   K  I +  I +V  ++++ H+    L +   +  + +G+ 
Sbjct: 60  GSLSASLYFIRRRAVDLNDQKLTILLALIGSVAGAILVQHMRADLLRQMLPLLVIGIGLY 119

Query: 141 MLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L   RL     +R+        + G   GF  G  G G G F  L  +   G ++ K+T
Sbjct: 120 FLLTPRLGESDRQRRLSALPFGLVAGGCVGFYDGFFGPGAGSFYALAYVTLCGFNLAKST 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A +  ++    F +L++ I  G  +     WS+G       L++L   +L   L   +
Sbjct: 180 AHAKVLNFTSNFGSLVLFIIGGKVV-----WSIG-------LVMLVGQVLGARLGAHM 225


>gi|192361530|ref|YP_001981013.1| hypothetical protein CJA_0490 [Cellvibrio japonicus Ueda107]
 gi|190687695|gb|ACE85373.1| putative membrane protein [Cellvibrio japonicus Ueda107]
          Length = 288

 Score = 76.6 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 55/293 (18%), Positives = 108/293 (36%), Gaps = 39/293 (13%)

Query: 4   LLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD 63
           LL N  L VF  + C +D+    IVA  + G + G+ GVGGG +M P+L       G+  
Sbjct: 13  LLKNQHLPVFSPESCFMDFHIGYIVAGLVVGFIVGMTGVGGGSLMTPILLY----FGVSP 68

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD- 122
           +     A+GT L   A T       H +   I+ +I  +          +T L++  +  
Sbjct: 69  AN----AVGTDLLYAAITKAGGIHVHHKKKNIDWRITGELALGSLPAAALTLLVLHSISI 124

Query: 123 -----KSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV-----------KYIWGMVT 166
                   +        +L  I +L + +++   +  ++++             + G++ 
Sbjct: 125 DTDTLNKIIKLTLGYALILTAIAILFKRKIFDYSRKNESWITRMTRRQQFIATVLTGVIL 184

Query: 167 GFLSGALGVGGGIFTN--LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
           G +     +G G      L ML+      +   T    +  +          +G G  GL
Sbjct: 185 GVVVTITSIGAGALGTVALFMLYPLLPTVRLVGTEIAHAVPLTL-------VAGMGHAGL 237

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                G V+   +  +L  S+    + + L+  +   YL    ++++      
Sbjct: 238 -----GNVDWSLLANLLMGSLPGIYMGSHLANRVADHYLRPALAIMLMLVGCK 285



 Score = 43.1 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 51/117 (43%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G +  +  +G G +    L   + L+    ++ +   +GT +    P ++++ 
Sbjct: 178 VLTGVILGVVVTITSIGAGALGTVALFMLYPLL---PTVRL---VGTEIAHAVPLTLVAG 231

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M H   G ++  +L + +        + S + + V   +L  A AI  +L+G  ++ 
Sbjct: 232 MGHAGLGNVDWSLLANLLMGSLPGIYMGSHLANRVADHYLRPALAIMLMLVGCKLVF 288


>gi|282849556|ref|ZP_06258940.1| putative membrane protein [Veillonella parvula ATCC 17745]
 gi|282580493|gb|EFB85892.1| putative membrane protein [Veillonella parvula ATCC 17745]
          Length = 264

 Score = 76.6 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 94/272 (34%), Gaps = 28/272 (10%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            D +V +     +  FL+  +  + G GGGLV VP+    F            + +GTSL
Sbjct: 2   IDNIVVFYIFFTIVGFLAAMIGTIIGAGGGLVFVPLFMYWF------PEWSPSMVVGTSL 55

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
             +   ++   + + +   + +     +        ++ + M           AF  F L
Sbjct: 56  FSVMCNAISGSIAYLKQKKVYINAAIIFSLATFPGAILGAQMSGWFSGKGFMFAFGCFML 115

Query: 136 LMGILMLKRDRLYCERKFP---------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
              +L+  ++    ERK              +        GF+S   G+GGG+     ++
Sbjct: 116 CASVLIGFKNFRKGERKEESLTLEQLSYSKSIGISISFFVGFISSIFGIGGGLIHVPALI 175

Query: 187 FY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           +  G   + ATATS  + A+     ++  +                +     +     +I
Sbjct: 176 YLMGFPTHMATATSQSILAVSTTVGVITHLIES------------HIIFSIAIPTSIGAI 223

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               +  +++  +  K +    S+ +F  +  
Sbjct: 224 FGAQVGARIAKRLKAKAILALMSIAVFALAVR 255



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 7/123 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           + I  SF  G +S +FG+GGGL+ VP L               H+A  TS  ++A ++ +
Sbjct: 147 IGISISFFVGFISSIFGIGGGLIHVPALIYLMGF-------PTHMATATSQSILAVSTTV 199

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + H     I   I             V + +   +    +    +I    + + ++ +
Sbjct: 200 GVITHLIESHIIFSIAIPTSIGAIFGAQVGARIAKRLKAKAILALMSIAVFALAVRLILK 259

Query: 145 DRL 147
             +
Sbjct: 260 SGI 262


>gi|312112189|ref|YP_003990505.1| hypothetical protein GY4MC1_3219 [Geobacillus sp. Y4.1MC1]
 gi|311217290|gb|ADP75894.1| protein of unknown function DUF81 [Geobacillus sp. Y4.1MC1]
          Length = 254

 Score = 76.6 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 101/257 (39%), Gaps = 18/257 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+  FL   + G+ G+GG ++  P+L     L G+  +   H   G S   +    +  
Sbjct: 5   FIIVIFLISFIGGMVGIGGSIIKYPMLLYLPPLFGL-VAFSAHEVSGISAVQVFFAIIGG 63

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +R+ G +N  ++      + I + +       + +  +N  + +   L   +M    
Sbjct: 64  VWAYRKSGYLNKTLILYMGISILIGSFLGGFGSKMMSEGTINVVYGVLAALAAAMMFAPK 123

Query: 146 R----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI-FTNLLMLFYGASIYKATATSA 200
           +    +  +    + ++     +V G  SG +G  G     +++++          A+S 
Sbjct: 124 KGIDDIPIDHLTFNKWLAATLALVIGIGSGIVGAAGAFLLVSVMLVVLKIPTRMTIASSL 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            ++ + +  + L +I            + G V +   +I++ +S++ +PL  K    +  
Sbjct: 184 AITLISSIGSTLGKI------------TAGQVALIPAIIMVIVSLIASPLGAKTGQKMDT 231

Query: 261 KYLTIGFSMIMFTTSFV 277
           K L +  + ++  T+  
Sbjct: 232 KILQVMLAFLILATAIK 248



 Score = 35.8 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 43/111 (38%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+ TL+ + G+G G+V          +M +   I   + + +SL +   +S+ S +    
Sbjct: 140 LAATLALVIGIGSGIVGAAGAFLLVSVMLVVLKIPTRMTIASSLAITLISSIGSTLGKIT 199

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            G + +      + V  I + + +     +D   L    A   L   I + 
Sbjct: 200 AGQVALIPAIIMVIVSLIASPLGAKTGQKMDTKILQVMLAFLILATAIKIW 250


>gi|229179345|ref|ZP_04306699.1| hypothetical protein bcere0005_26950 [Bacillus cereus 172560W]
 gi|228604243|gb|EEK61710.1| hypothetical protein bcere0005_26950 [Bacillus cereus 172560W]
          Length = 336

 Score = 76.6 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 93/276 (33%), Gaps = 23/276 (8%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
             S    ++    +  + +  +  F +  + G  G+  G V    L   F +     S  
Sbjct: 24  KVSFSFIITGGLFMQKLIVFAIIGFFAQLIDGALGMAYG-VTSSSLLLMFGIAPAVASAS 82

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +H+A          T+  S   H + G ++   +        I   V +  +S++    +
Sbjct: 83  VHLAE-------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVI 135

Query: 127 NKAFAIFCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
               +IF   +G+ +L R     ++    K          G+  GF+    G G G  T 
Sbjct: 136 KPYISIFLFTLGVYILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITT 195

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIIL 241
            ++L  G    K   +       ++  A +    S GW            V+   V  ++
Sbjct: 196 PVLLARGNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALM 245

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              I+  P+A  L  ++    L +    ++  T+  
Sbjct: 246 LGGIVAAPIAAWLVRIVPPHLLGVLVGGLIIFTNIR 281


>gi|300778844|ref|ZP_07088702.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Chryseobacterium gleum ATCC 35910]
 gi|300504354|gb|EFK35494.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Chryseobacterium gleum ATCC 35910]
          Length = 295

 Score = 76.6 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 101/279 (36%), Gaps = 25/279 (8%)

Query: 1   MYDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG 60
           MY+L Y   L   L+KD  + Y   +I+    +  ++G  G+G G++    L        
Sbjct: 28  MYELGYLEELQTILAKDNYIFY--WMILVGVFAEIVAGSMGMGYGVICTTTLMLL----- 80

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
              +I  H+   +     + T+    + H +   ++  ++K       I  ++ ++ +++
Sbjct: 81  ---NIPPHIVSASIHSAESFTTAAGSVSHIKLKNVSKSLVKKLAIPAVIGAIIGAVCLTY 137

Query: 121 VD---KSFLNKAFAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
           +            A + L +G  +L    +    +           G++ GF+    G G
Sbjct: 138 LGEYYAKITKTLIAFYTLYLGFQILSNAFKEKQSKALKRKTNLIRLGVIGGFIDSFAGGG 197

Query: 177 GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
            G      ++    +   A  +S     ++   A +              ++LG  +   
Sbjct: 198 WGPLVTGTLIKNAFTPRFAVGSSTVAKFILTITAAVTFF-----------FTLGIQHWNI 246

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +L +L   I+  P +  L+  +  K + +    ++   S
Sbjct: 247 ILGLLIGGIVTAPFSAMLTAKLPVKKMFVIIGTLVIVMS 285


>gi|325276029|ref|ZP_08141846.1| hypothetical protein G1E_21401 [Pseudomonas sp. TJI-51]
 gi|324098840|gb|EGB96869.1| hypothetical protein G1E_21401 [Pseudomonas sp. TJI-51]
          Length = 249

 Score = 76.6 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 81/228 (35%), Gaps = 17/228 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++          +   + 
Sbjct: 29  AIPALGVLFGLDQQLAQGTALVMVVPNVLLALWRYHQRNRIELRHALPLSLCSFVFAWLG 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGI----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           S+    +D   +   F  F + + +     M  +                + G   G + 
Sbjct: 89  SIWAVGLDAHSMRLGFVGFLVALAVWNVARMFMKVAPASAELRYAWPWLGVLGSFAGTMG 148

Query: 171 GALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G  GVGG +    ++   +G +   A   S  ++A      L+       G++    W +
Sbjct: 149 GLFGVGGAVVATPILTSVFGTTQVVAQGLSLALAAPSTLVTLVTY-----GVHHSVDWGV 203

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G       L +    +L      KL++ + +K L   F + +   + +
Sbjct: 204 G-------LPLAVGGLLSISWGVKLAHALPEKVLRAMFCVFLVVCAVM 244



 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 54/117 (46%), Gaps = 7/117 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            + V    +GT+ GLFGVGG +V  P+L+  F            VA G SL + AP++++
Sbjct: 136 WLGVLGSFAGTMGGLFGVGGAVVATPILTSVF-------GTTQVVAQGLSLALAAPSTLV 188

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + + +  H +++  +         ++      +   + +  L   F +F ++  +++
Sbjct: 189 TLVTYGVHHSVDWGVGLPLAVGGLLSISWGVKLAHALPEKVLRAMFCVFLVVCAVML 245


>gi|228953387|ref|ZP_04115433.1| hypothetical protein bthur0006_27670 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228806284|gb|EEM52857.1| hypothetical protein bthur0006_27670 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 336

 Score = 76.6 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 93/276 (33%), Gaps = 23/276 (8%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
             S    ++    +  + +  +  F +  + G  G+  G+     L   F +     S  
Sbjct: 24  KVSFSFIITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASAS 82

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +H+A          T+  S   H + G ++   +        I   V +  +S++    +
Sbjct: 83  VHLAE-------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDII 135

Query: 127 NKAFAIFCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
               ++F   +G+ +L R     ++    K          G+  GF+    G G G  T 
Sbjct: 136 KPYISVFLFTLGVYILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITT 195

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIIL 241
            ++L  G    K   +       ++  A +    S GW            V+   V  ++
Sbjct: 196 PVLLARGNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALM 245

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              I+  P+A  L  ++    L I    ++  T+  
Sbjct: 246 LGGIVAAPIAAWLVRIVPPHLLGILVGGLIIFTNIR 281


>gi|226943649|ref|YP_002798722.1| hypothetical protein Avin_15320 [Azotobacter vinelandii DJ]
 gi|226718576|gb|ACO77747.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
          Length = 249

 Score = 76.6 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 86/227 (37%), Gaps = 18/227 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G+   +  H+A G++L ++ P  +++   + +   I+ +           T  + 
Sbjct: 31  AIPVLGLLFGLDQHLAQGSALVMVVPNVLLALRRYHQRNRIDPRHALVMAGSGLCTAWLG 90

Query: 115 SLMISHVDKSFLNKAFAIFCLLMG----ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           +   + +D   + +AF  F L +     + +  R     E   P        GM +G L 
Sbjct: 91  AQAANLLDAGHMRQAFCGFLLALATWSGLRLFLRPAPGGELCRP-WPWLVPLGMGSGTLG 149

Query: 171 GALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G  GVGG +    L++  +GAS   A   S  ++      +L      G        W L
Sbjct: 150 GLFGVGGALVATPLLIALFGASQVVAQGLSLALAVPSTLVSLATYALHG-----RVDWML 204

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           G       + +    +       +L++ + ++ L + F  +M   + 
Sbjct: 205 G-------ISLAIGGLSGVGWGVRLAHALPERALGLLFCGLMSFCAL 244



 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            ++     SGTL GLFGVGG LV  P+L   F    +       VA G SL +  P++++
Sbjct: 137 WLVPLGMGSGTLGGLFGVGGALVATPLLIALFGASQV-------VAQGLSLALAVPSTLV 189

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S   +  HG ++  +                 +   + +  L   F        +L+L  
Sbjct: 190 SLATYALHGRVDWMLGISLAIGGLSGVGWGVRLAHALPERALGLLFCGLMSFCALLLLLD 249


>gi|269960963|ref|ZP_06175332.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269834182|gb|EEZ88272.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 261

 Score = 76.6 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 93/267 (34%), Gaps = 29/267 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+    + 
Sbjct: 7   TMLLVLALVAFVAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAASF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + +      +          I   + +L +  +   +L K   +  L   + 
Sbjct: 58  ASSTAAFTYYKKRLFKPQCWGRAFVATLIGATLGTLFVDAISTQWLEKVLPLIILAAAMY 117

Query: 141 MLKRDRLYCERKFPD-------NYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASI 192
            +         + P        N  +Y+ G   GF  G  G G G F T   M  Y  +I
Sbjct: 118 TVFHKTPQSTHQSPTPEPCPMLNKKQYMQGFTIGFYDGLAGPGTGAFWTVSSMALYRLNI 177

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A+  +  ++    F +L+                LG +N    L +    +    +  
Sbjct: 178 LLASGLAKAMNFTSNFTSLITFAV------------LGHINWVLGLTMGVCLMAGAFVGA 225

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             +   G K++   F  ++   +   A
Sbjct: 226 HSAIRFGSKFIRPVFVTVVSVLAIKLA 252


>gi|229070533|ref|ZP_04203774.1| hypothetical protein bcere0025_27170 [Bacillus cereus F65185]
 gi|229080237|ref|ZP_04212764.1| hypothetical protein bcere0023_28850 [Bacillus cereus Rock4-2]
 gi|228703132|gb|EEL55591.1| hypothetical protein bcere0023_28850 [Bacillus cereus Rock4-2]
 gi|228712615|gb|EEL64549.1| hypothetical protein bcere0025_27170 [Bacillus cereus F65185]
          Length = 336

 Score = 76.6 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
             S    ++    +  + +  +  F +  + G  G+  G+     L   F +     S  
Sbjct: 24  KVSFSFIITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASAS 82

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +H+A          T+  S   H + G ++   +        I   + +  +S++    +
Sbjct: 83  VHLAE-------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFIGACFLSNLPGDVI 135

Query: 127 NKAFAIFCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
               ++F   +G+ +L R     ++    K          G+  GF+    G G G  T 
Sbjct: 136 KPYISVFLFTLGVYILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITT 195

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIIL 241
            ++L  G    K   +       ++  A +    S GW            V+   V  ++
Sbjct: 196 PVLLARGNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALM 245

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              I+  P+A  L  ++    L +    ++  T+  
Sbjct: 246 LGGIVAAPIAAWLVRIVPPHLLGVLVGGLIIFTNIR 281


>gi|229520316|ref|ZP_04409742.1| hypothetical protein VIF_000838 [Vibrio cholerae TM 11079-80]
 gi|229342682|gb|EEO07674.1| hypothetical protein VIF_000838 [Vibrio cholerae TM 11079-80]
          Length = 257

 Score = 76.6 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 94/264 (35%), Gaps = 28/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+       S
Sbjct: 9   IMVLALVAFIAGFIDAVAG-GGGMLTVPALLSL--------GLPPHLALGTNKLAATFAS 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R    +    K       I  ++ +L++  +   +L K   +  L   +  +
Sbjct: 60  STAAWTYYRQKLFDPACWKRAFIATLIGAILGTLVVDAISTDWLRKVLPLIILAAALYTV 119

Query: 143 KRDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
                  E+             + + G+  GF  G  G G G F T   M  Y  +I  A
Sbjct: 120 LHRPHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILLA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++    F +L+                LG ++    L +    +    +    +
Sbjct: 180 SGLAKAMNLTSNFTSLVTFAL------------LGHIDWLLGLTMGVCLMAGAYVGAHSA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G  ++   F +++   +   A
Sbjct: 228 IRFGAPFIRPLFILVVTILAGKLA 251


>gi|315647880|ref|ZP_07900981.1| permease [Paenibacillus vortex V453]
 gi|315276526|gb|EFU39869.1| permease [Paenibacillus vortex V453]
          Length = 248

 Score = 76.6 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 97/256 (37%), Gaps = 30/256 (11%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I +     G L G  G GG   ++ +L   F        I +H A+GTS+  +  T +  
Sbjct: 3   IFITMLFLGGLLGFVGAGGSGFIIALLVTVFH-------IPVHTALGTSIAAMVFTMISG 55

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + H R     +           +     S     + +  L    AI   L G+L++ R 
Sbjct: 56  SVSHLREKNAILSTGLAVGLFGAMGAYAGSFAARLIPEDRLVLCTAIMLFLSGLLIMLRT 115

Query: 146 RLYCERKFPDNYVK--------YIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
           R+    K     ++         I G++TG +SG  G+G   F  L LM+ +   I  A 
Sbjct: 116 RMQFTPKPMLTSIRSSRFWMMALISGLITGGMSGVFGIGSTPFIQLALMVLFNMPITLAV 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T+  V   IA    +              +  G+++   +L ++  +++ + +  K + 
Sbjct: 176 GTTMMVIMPIALFGGIGY------------FQAGYIDWQLLLQVVAGTMIGSYIGAKYTS 223

Query: 257 MIGKKYLTIGFSMIMF 272
              +  L   FSMI+ 
Sbjct: 224 KAPRTLLR--FSMILM 237



 Score = 46.2 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 60/118 (50%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +++  ++G +SG+FG+G    +   L   F       ++ + +A+GT++ VI P ++   
Sbjct: 138 LISGLITGGMSGVFGIGSTPFIQLALMVLF-------NMPITLAVGTTMMVIMPIALFGG 190

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + + + G I+ ++L   +    I + + +   S   ++ L  +  +  +L GI+ML R
Sbjct: 191 IGYFQAGYIDWQLLLQVVAGTMIGSYIGAKYTSKAPRTLLRFSMILMPILGGIIMLLR 248


>gi|206968958|ref|ZP_03229913.1| putative membrane protein [Bacillus cereus AH1134]
 gi|206735999|gb|EDZ53157.1| putative membrane protein [Bacillus cereus AH1134]
          Length = 336

 Score = 76.6 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
             S    ++    +  + +  +  F +  + G  G+  G V    L   F +     S  
Sbjct: 24  KVSFSFIITGGLFMQKLIVFAIIGFFAQLIDGALGMAYG-VTSSSLLLMFGIAPAVASAS 82

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +H+A          T+  S   H + G ++   +        I   V +  +S++    +
Sbjct: 83  VHLAE-------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVI 135

Query: 127 NKAFAIFCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
               ++F   +G+ +L R     ++    K          G+  GF+    G G G  T 
Sbjct: 136 KPYISVFLFTLGVYILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITT 195

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIIL 241
            ++L  G    K   +       ++  A +    S GW            V+   V  ++
Sbjct: 196 PVLLARGNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALM 245

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              ++  P+A  L  ++    L +    ++  T+  
Sbjct: 246 LGGLVAAPIAAWLVRIVPPHLLGVLVGGLIIFTNIR 281


>gi|257437691|ref|ZP_05613446.1| conserved hypothetical protein [Faecalibacterium prausnitzii
           A2-165]
 gi|257199998|gb|EEU98282.1| conserved hypothetical protein [Faecalibacterium prausnitzii
           A2-165]
          Length = 259

 Score = 76.6 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 99/255 (38%), Gaps = 25/255 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  I +   A   +G  +G  G+    V+ P+L      +G+D     ++A+G +L   
Sbjct: 3   LLFTIIVTFFAGMGAGLGTGFAGMSAAAVISPMLI---TFLGMDP----YMAVGIALSSD 55

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              S +S   + ++  +++K     +  + + TVV S + S V  + +         L+G
Sbjct: 56  VLASAVSAYTYHKNKNLDIKNGLIMMASVLLFTVVGSWVASLVPSTTMGSFSVFMTFLLG 115

Query: 139 ILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
           I  + +  +  +        K       + G+V G + G +G GGG+   L++    G  
Sbjct: 116 IKFIVKPVMTTKEAMQGVSAKKRALQSIVCGVVIGMICGFIGAGGGMMMLLILTSVLGYE 175

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           +  A  TS  +    A    +     G    G P W++        ++ +  ++L   +A
Sbjct: 176 LKTAVGTSVFIMTFTALTGAVSHFTIG----GAPDWTV-------FILCVLFTLLWARIA 224

Query: 252 TKLSYMIGKKYLTIG 266
              +     K L   
Sbjct: 225 AVFANKADAKTLNRA 239


>gi|47568645|ref|ZP_00239343.1| predicted permeases [Bacillus cereus G9241]
 gi|47554741|gb|EAL13094.1| predicted permeases [Bacillus cereus G9241]
          Length = 388

 Score = 76.6 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 93/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A  
Sbjct: 82  TITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE- 139

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   + +  +S++    +    ++
Sbjct: 140 ------VVTTAASGASHIKIGNVDKYTVSRLTLPGAIGAFIGACFLSNLPGDVIKPYISV 193

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R     ++   +K          G+  GF+    G G G  T  ++L  
Sbjct: 194 FLFTLGVYILLRFIIQKQVVTSKKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLAR 253

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       ++  A +    S GW            V+   V  ++   I+ 
Sbjct: 254 GNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFSLMLGGIVA 303

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  ++    L +    ++  T+  
Sbjct: 304 APIAAWLVRIVPSHLLGVLVGGLIIFTNIR 333


>gi|295133829|ref|YP_003584505.1| hypothetical protein ZPR_1984 [Zunongwangia profunda SM-A87]
 gi|294981844|gb|ADF52309.1| membrane protein, putative [Zunongwangia profunda SM-A87]
          Length = 271

 Score = 76.6 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 7/119 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+I+   L+G ++GL G GGG ++VP+L            + M  A+GTSL +IA  S++
Sbjct: 152 LMILLGALTGLVTGLVGAGGGFIIVPILVFL-------AGLNMKEAVGTSLFIIAINSII 204

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            F+    H  ++   L  +  +  +       +   ++   L KAF    L+MGI +L 
Sbjct: 205 GFLGDLGHLNVDWFFLLLFTIISIVGIFFGIYLSRFINSQKLKKAFGWMVLIMGIYILY 263



 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 94/254 (37%), Gaps = 43/254 (16%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VPV      +  +        A   SL V+  +S +  +++   G I+ K    +  
Sbjct: 28  ILTVPVFVYILHINPV-------TATAYSLFVVGSSSAVGAIDNFNKGRIDFKSSLIFAL 80

Query: 106 VLPITTVVT-SLMISHVDKSF-------------LNKAFAIFCLLMGILMLKRDRLYC-- 149
              I+   T   ++  +                 +   FAI  L+    M+ + +  C  
Sbjct: 81  PAVISIFSTRKYLLPAIPHHIANFGNFELTKDLMIMSFFAILMLVASASMILKKKKECVD 140

Query: 150 ---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSAL 205
              E    +N +  + G +TG ++G +G GGG     +++F  G ++ +A  TS     +
Sbjct: 141 CENEPNESNNGLMILLGALTGLVTGLVGAGGGFIIVPILVFLAGLNMKEAVGTSL---FI 197

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVN--IGAVLIILPISILITPLATKLSYMIGKKYL 263
           IA  +++  +             LG +N     +L+   ISI+       LS  I  + L
Sbjct: 198 IAINSIIGFL-----------GDLGHLNVDWFFLLLFTIISIVGIFFGIYLSRFINSQKL 246

Query: 264 TIGFSMIMFTTSFV 277
              F  ++      
Sbjct: 247 KKAFGWMVLIMGIY 260


>gi|330994446|ref|ZP_08318371.1| UPF0721 transmembrane protein [Gluconacetobacter sp. SXCC-1]
 gi|329758446|gb|EGG74965.1| UPF0721 transmembrane protein [Gluconacetobacter sp. SXCC-1]
          Length = 262

 Score = 76.6 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 96/261 (36%), Gaps = 23/261 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L + +  + G   GL G GG ++ VP+L      +G+ D    H A+GTS   +   ++
Sbjct: 8   LLGLCSGGVIGFTLGLVGGGGSILAVPLLLYV---VGMPDP---HRAIGTSALAVTINAL 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +  +H R G +  K    +     I  +  +     ++   L   FA+  L +G LML+
Sbjct: 62  SNLAQHARTGNVRWKCATVFAGAGVIGALGGASCGKIINGQRLLFLFALVMLGVGALMLR 121

Query: 144 RDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             R+        ER  P   + Y            +G G  +    L+   G  +  A  
Sbjct: 122 GCRMPAQAAARPERDSPLPVLGYGIATGFCSGFFGIGGG-FLIVPALLAATGMPMLNAIG 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS                 +G     +    +G +  G V   +  ++L   L ++    
Sbjct: 181 TSLVAVCAFGLTTSASYAMAGMVDLPM----VGILVAGGVAGGMGGTLLARRLGSR---- 232

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
              ++L + F+ ++F  +   
Sbjct: 233 --PQHLRLIFACLIFLVALYM 251



 Score = 37.7 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 40/130 (30%), Gaps = 14/130 (10%)

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY--GASIYKATATSAGVSALIAF 208
                  +    G V GF  G +G GG I    L+L+       ++A  TSA    + A 
Sbjct: 2   PDLIQGLLGLCSGGVIGFTLGLVGGGGSILAVPLLLYVVGMPDPHRAIGTSALAVTINAL 61

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
             L     +            G V      +     ++          +I  + L   F+
Sbjct: 62  SNLAQHART------------GNVRWKCATVFAGAGVIGALGGASCGKIINGQRLLFLFA 109

Query: 269 MIMFTTSFVF 278
           ++M     + 
Sbjct: 110 LVMLGVGALM 119


>gi|300767954|ref|ZP_07077862.1| permease [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|300494495|gb|EFK29655.1| permease [Lactobacillus plantarum subsp. plantarum ATCC 14917]
          Length = 286

 Score = 76.6 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 106/296 (35%), Gaps = 50/296 (16%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +    ++  + L++    ++G    + G+GGG+++ P+L+    L        +  A+G 
Sbjct: 1   MKVKEMIYSLGLMLGVGVIAGIFGAILGIGGGMIVTPILTLGLGLD-------IKYAIGA 53

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           S+  +  TS  S + + R   +N+++         +  V+ +++   ++ +FL   F   
Sbjct: 54  SIIAVIATSSGSTIAYLRDEMLNLRVAMFLEIATTVGAVLGAVLTGVLNATFLYFLFGAL 113

Query: 134 CLLMGILMLKR------------------------------DRLYCERKFPDNYVKYIWG 163
            +     M+++                                   + +  +    +   
Sbjct: 114 LVFTTYNMIRKLMSKNGELPSVKDDKLATQLNLNGTYYDKALNKQVDYQVENVPGGFSMM 173

Query: 164 MVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
              GF SG LG+G G F  L M       +  ++ATS  +  + A  + +V  ++G    
Sbjct: 174 FGAGFASGLLGIGSGAFKVLAMDTIMHMPLKPSSATSNLMMGVTAAASAMVYFFNGSIKP 233

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G+               +    I+   + +++   +  + + + F  +M       
Sbjct: 234 GI------------AAPLAIGIIVGALIGSRIMTRLKPRLIRMIFVPVMLYLGIQM 277



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G  SGL G+G G   V  +            + +  +  TS  ++  T+  S M + 
Sbjct: 174 FGAGFASGLLGIGSGAFKVLAMDTIMH-------MPLKPSSATSNLMMGVTAAASAMVYF 226

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +G+I   I       + +  ++ S +++ +    +   F    L +GI M+ +
Sbjct: 227 FNGSIKPGIAAPLAIGIIVGALIGSRIMTRLKPRLIRMIFVPVMLYLGIQMIAK 280


>gi|297560616|ref|YP_003679590.1| hypothetical protein Ndas_1655 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296845064|gb|ADH67084.1| protein of unknown function DUF81 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 292

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 5/142 (3%)

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            ++ + +  RR G +    +      + +  V+ SL+ + V        F  +  +  + 
Sbjct: 88  NALSATLSQRRAGRLRRDYVWPLAAYIGVGAVLGSLVATVVGGGAQRVLFIAYIAVTLLD 147

Query: 141 MLKRD-----RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            L R          E +          G+  G ++  LGVGG + T  L+   G  + +A
Sbjct: 148 TLLRKGFLTHDPDAEPRLLGRRTTTAGGVAIGAVTSFLGVGGSVMTVPLLRRRGLPMGEA 207

Query: 196 TATSAGVSALIAFPALLVRIYS 217
           TA +  +S  +A     V    
Sbjct: 208 TAMANPLSLPVAVAGTAVYALF 229


>gi|150390000|ref|YP_001320049.1| permease [Alkaliphilus metalliredigens QYMF]
 gi|149949862|gb|ABR48390.1| permease [Alkaliphilus metalliredigens QYMF]
          Length = 122

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 7/119 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++    +G ++GLFG GGG ++VP L+  F        +  H A  T++ +I P +++S
Sbjct: 11  MMLVGLTAGIINGLFGAGGGTIIVPALTFIF-------CVKQHQAHATAISIILPFAMVS 63

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              + RHG     I         I + + S +++    S+L K F +F +L  I M+  
Sbjct: 64  SFIYYRHGFAEPTITFQITSGAVIGSYIGSKLLTRFSASYLRKTFGVFMILASIRMIFS 122



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 43/123 (34%), Gaps = 13/123 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRI 215
           +   + G+  G ++G  G GGG      + F +    ++A AT+  +    A  +  +  
Sbjct: 9   FKMMLVGLTAGIINGLFGAGGGTIIVPALTFIFCVKQHQAHATAISIILPFAMVSSFIYY 68

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G+    +               I   +++ + + +KL       YL   F + M   S
Sbjct: 69  RHGFAEPTI------------TFQITSGAVIGSYIGSKLLTRFSASYLRKTFGVFMILAS 116

Query: 276 FVF 278
              
Sbjct: 117 IRM 119


>gi|313113272|ref|ZP_07798881.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624409|gb|EFQ07755.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 258

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 92/255 (36%), Gaps = 25/255 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           V+  + +   A   +G  +G  G+    V+ P+L     +          +A+G +L   
Sbjct: 3   VLFTVLVTFFAGMGAGLGTGFAGMSAAAVISPMLITFLHMDPY-------MAVGIALSSD 55

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              S +S   + ++  +++K     +  + + TVV S + S V  + +         L+G
Sbjct: 56  VLASAVSAYTYHKNKNLDIKNGLIMMVSVLLFTVVGSWVASRVPSATMGGFSVFMTFLLG 115

Query: 139 ILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
           +  + R  +  +        K       + G++ GF+ G +G GGG+   L++    G  
Sbjct: 116 VKFIVRPVMTTKEAMQGVSAKKRAIQSIVCGVLIGFICGFIGAGGGMMMLLILTSVLGYE 175

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           +  A  TS  +    A    +     G           G  N     + +  ++L   +A
Sbjct: 176 LKTAVGTSVFIMTFTALTGAVSHFMIG-----------GAPNWFVWALCVVFTLLWARIA 224

Query: 252 TKLSYMIGKKYLTIG 266
              +     K L   
Sbjct: 225 AVFANKADPKTLNRA 239


>gi|296332930|ref|ZP_06875390.1| permease [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305673276|ref|YP_003864948.1| putative permease [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296150210|gb|EFG91099.1| permease [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305411520|gb|ADM36639.1| putative permease [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 245

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 51/207 (24%), Positives = 83/207 (40%), Gaps = 19/207 (9%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           + +H A+GTSL  +A TS+     H R G I MKI         + +   + + S +   
Sbjct: 35  VPIHTALGTSLAGMAFTSLSGAYSHYREGNIQMKIGLTVGCFAAVGSFFGAKLTSFIPAD 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCER------KFPDNYVKYIWGMVTGFLSGALGVGGG 178
            L+   A    L  IL+L R  L  E+               I G+V G LSG  G+G  
Sbjct: 95  LLHYLTAGMLFLSAILILIRLFLLKEKAQVNQSSLSTYTRAVILGIVAGVLSGTFGIGSA 154

Query: 179 IFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
            F  + LM+    SI  +  T+  V   +A    +  I            + GFV+   +
Sbjct: 155 PFIQIGLMIMLNLSIRHSVGTTMLVIIPLAVGGGIGYI------------TEGFVDYVLL 202

Query: 238 LIILPISILITPLATKLSYMIGKKYLT 264
           + +L  ++    +  K + ++ K  L 
Sbjct: 203 IKVLVGTMCGAYVGAKFTNLMPKVVLK 229


>gi|171915322|ref|ZP_02930792.1| hypothetical protein VspiD_29145 [Verrucomicrobium spinosum DSM
           4136]
          Length = 264

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 84/238 (35%), Gaps = 25/238 (10%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
             A  L+    S+ +  AMG SL  +  T+    +   RHG +       +     +T  
Sbjct: 28  IFAVPLLLYGLSVPVGTAMGLSLATVGLTAGFGALLRLRHGEVEWPAGLIFAVAGMLTAP 87

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF-------PDNYV------K 159
           + + +  H+  + L   FA+    +G  M +      +          P  +        
Sbjct: 88  LGTTLGRHLPAALLLSTFALLMAYIGARMWRGRGAEDDAPPSRCVARGPGAFGPECYLRL 147

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
              G   G LSG  GVGGG     ++LF  G SI++A ATS  V  LI+   ++  +  G
Sbjct: 148 GSGGAAAGLLSGLFGVGGGFIIVPVLLFVTGMSIHRAVATSLLVIFLISVSGVIAHMLHG 207

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                          +   L+ +        L + L   +    L   F+  M+  + 
Sbjct: 208 QLFP-----------MPLSLLFIGGGFAGMLLGSTLRSRVHGNTLQRLFAAAMWLVAL 254



 Score = 68.9 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 8/118 (6%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
               +G LSGLFGVGGG ++VPVL            + +H A+ TSL VI   SV   + 
Sbjct: 150 GGAAAGLLSGLFGVGGGFIIVPVLLFV-------TGMSIHRAVATSLLVIFLISVSGVIA 202

Query: 89  HRRHGTI-NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           H  HG +  M +   +I       ++ S + S V  + L + FA    L+ + ML R+
Sbjct: 203 HMLHGQLFPMPLSLLFIGGGFAGMLLGSTLRSRVHGNTLQRLFAAAMWLVALWMLVRN 260


>gi|111017581|ref|YP_700553.1| hypothetical protein RHA1_ro00560 [Rhodococcus jostii RHA1]
 gi|110817111|gb|ABG92395.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 258

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 87/199 (43%), Gaps = 9/199 (4%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++++   ++G  + LFG GGG V VPV+  A   +G        VA+ TS  V+   + +
Sbjct: 5   VLVLIGLVTGLTTVLFGFGGGFVTVPVVLWAEAGLG---DSAARVAVATSAAVMMVNAAV 61

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +     R    +++  +  + +L +  V  +L+   V  + +   F I+ +   + +L R
Sbjct: 62  ATSATSRTVLRHLRDSRCLLALLGLGGVAGALLARLVPGAIIQWGFVIYLVGTIVDVLVR 121

Query: 145 DR------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
                    +         +    G+  G  +  LGVGG + T  L+   G  +  ATA 
Sbjct: 122 PGFFRPAAPHTTDSRQRFAIPTSLGLPIGASAAFLGVGGSVMTVPLLRRSGLMMGVATAL 181

Query: 199 SAGVSALIAFPALLVRIYS 217
           +  ++  I+ PA+L+ +  
Sbjct: 182 ATPLTLAISLPAVLIFLVG 200


>gi|322692074|ref|YP_004221644.1| hypothetical protein BLLJ_1888 [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320456930|dbj|BAJ67552.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           longum JCM 1217]
          Length = 271

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 94/242 (38%), Gaps = 24/242 (9%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
           FG+GGG ++VP L            +    A  TS+  I PTSV   + +   G ++   
Sbjct: 39  FGIGGGTIIVPALVWL--------GLTQRHAAATSMLAIVPTSVSGVLAYAVEGNVDWIA 90

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG---ILMLKRDRLYCERKFPDN 156
                  + I   + SL++S + +  L  AF +F   +    ++ +       E      
Sbjct: 91  ALLMFLGMFIGGQIGSLLLSRLPEVVLRWAFVVFMAFIIASQLIFIPSRDSSIEFNLVTV 150

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRI 215
            +  ++G++ G L+G LGVGGG      + + +GAS   A  TS       A    +  +
Sbjct: 151 LLMIVFGVLAGILAGLLGVGGGAICVPALSILFGASDLIARGTSLLSMFPNAMTTTVANV 210

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                           V+  A LII  ++ L  PL T ++  +  +   I F+  +    
Sbjct: 211 RRKM------------VHAKAGLIIGIVAALTAPLGTWIAGAMSPRAGGILFATYLTVLL 258

Query: 276 FV 277
             
Sbjct: 259 IR 260


>gi|308172393|ref|YP_003919098.1| integral inner membrane protein [Bacillus amyloliquefaciens DSM 7]
 gi|307605257|emb|CBI41628.1| putative integral inner membrane protein [Bacillus
           amyloliquefaciens DSM 7]
 gi|328910487|gb|AEB62083.1| putative integral inner membrane protein [Bacillus
           amyloliquefaciens LL3]
          Length = 252

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 60/251 (23%), Positives = 102/251 (40%), Gaps = 28/251 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I LII+  FL G + G  G GG   ++ +L+  F        + +H A+GTSL  +A TS
Sbjct: 5   IVLIILVMFLLGIILGFIGAGGAGFVIALLTILFH-------VPIHTALGTSLAGMAFTS 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +     H R G I MKI           +   + + S +    L+   A    L  +L+L
Sbjct: 58  LSGAFSHYREGNIQMKIGLIVGVFAAFGSFFGARLTSLIPADLLHYLTAGMLFLSALLIL 117

Query: 143 KRDRLYCERK--------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIY 193
            R  +  E +                + G++ G LSG  G+G   F  + LM+    SI 
Sbjct: 118 VRLFILKETQEDSGRQSNLNIWVKAVVLGIIAGILSGTFGIGSAPFIQIGLMILLRLSIR 177

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           ++  T+  V   +A    L  +            + GFV+   ++ +L  ++    +  K
Sbjct: 178 QSVGTTMLVIIPLAVGGGLGYV------------TEGFVDYMLLVKVLIGTMCGAYVGAK 225

Query: 254 LSYMIGKKYLT 264
            + ++ K  L 
Sbjct: 226 FTNLVPKVILK 236



 Score = 36.6 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 7/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +V   ++G LSG FG+G    +   L    +L        +  ++GT++ VI P +V   
Sbjct: 143 VVLGIIAGILSGTFGIGSAPFIQIGLMILLRL-------SIRQSVGTTMLVIIPLAVGGG 195

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + +   G ++  +L   +        V +   + V K  L  A  +   + G+++L 
Sbjct: 196 LGYVTEGFVDYMLLVKVLIGTMCGAYVGAKFTNLVPKVILKSAIFLTPAIAGLMLLF 252


>gi|187478902|ref|YP_786926.1| membrane protein [Bordetella avium 197N]
 gi|115423488|emb|CAJ50022.1| putative membrane protein [Bordetella avium 197N]
          Length = 252

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 92/227 (40%), Gaps = 17/227 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ PT VM+  ++ +H  ++ ++          +T V 
Sbjct: 32  AIPALGLLLGMSQQLAQGTALIMVLPTIVMAVRKYNQHVRLDRRVAIAGAAGAVFSTWVG 91

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGI----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           + +   +    L   FA+F   + +      L++       +        + G+V G L 
Sbjct: 92  ARLALDIPSRTLRLGFAVFLFCIALFYLYKTLRKPAPSGGARPFTPPAAVVLGVVCGMLG 151

Query: 171 GALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G  GVGG +    L+   +      A A +  +    +  AL+   ++G        W +
Sbjct: 152 GFFGVGGAVLAVPLLTTMFRLPQTSAQALALSMVIPGSTIALITYGWAGET-----DWRI 206

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           G       L +   S+L  P+  +L+Y + +K L   F+ ++  T  
Sbjct: 207 G-------LPLAVGSLLFVPVGVRLAYRLPEKRLRAIFAAMLMVTVL 246



 Score = 35.8 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 39/98 (39%), Gaps = 7/98 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP+L+  F+L           A   +L ++ P S ++ + +   G  + +I      
Sbjct: 160 VLAVPLLTTMFRL-------PQTSAQALALSMVIPGSTIALITYGWAGETDWRIGLPLAV 212

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              +   V   +   + +  L   FA   ++  +L++ 
Sbjct: 213 GSLLFVPVGVRLAYRLPEKRLRAIFAAMLMVTVLLLIF 250


>gi|228922380|ref|ZP_04085686.1| hypothetical protein bthur0011_33690 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228837255|gb|EEM82590.1| hypothetical protein bthur0011_33690 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 245

 Score = 76.3 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         I + + S   S +   
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 88

Query: 125 FLNKAFAIFCLLMGILMLKR---------DRLYCERKFPDNYVK--YIWGMVTGFLSGAL 173
            L+   A    L  I M  +           LY  ++FP NY+      G+VTG ++G+ 
Sbjct: 89  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKEFPVNYLLKCICLGLVTGMMAGSF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 149 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 196

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 197 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR--FSMIM 233



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K+  V+Y+   I    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 124 KEFPVNYLLKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 176

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 177 LVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR 228


>gi|218232700|ref|YP_002367776.1| hypothetical protein BCB4264_A3067 [Bacillus cereus B4264]
 gi|218160657|gb|ACK60649.1| putative membrane protein [Bacillus cereus B4264]
          Length = 369

 Score = 76.3 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
             S    ++    +  + +  +  F +  + G  G+  G+     L   F +     S  
Sbjct: 57  KVSFSFIITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASAS 115

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +H+A          T+  S   H + G ++   +        I   V +  +S++    +
Sbjct: 116 VHLAE-------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVI 168

Query: 127 NKAFAIFCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
               ++F   +G+ +L R     ++    K          G+  GF+    G G G  T 
Sbjct: 169 KPYISVFLFTLGVYILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITT 228

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIIL 241
            ++L  G    K   +       ++  A +    S GW            V+   V  ++
Sbjct: 229 PVLLARGNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFSLM 278

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              I+  P+A  L  ++    L +    ++  T+  
Sbjct: 279 LGGIVAAPIAAWLVRIVPSHLLGVLVGGLIIFTNIR 314


>gi|23099829|ref|NP_693295.1| hypothetical protein OB2374 [Oceanobacillus iheyensis HTE831]
 gi|22778060|dbj|BAC14330.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 285

 Score = 76.3 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 110/283 (38%), Gaps = 36/283 (12%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            VV  IC II  + L+  +  L G+GGG++++P+L  + Q +   + +     +  SL V
Sbjct: 11  MVVALICFII--AVLAAFIGSLVGLGGGIILIPLLLLSSQYVIGFEWVSPQSVVAMSLVV 68

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +  T + S + + +   ++      ++      +++ + +  +V+       F +  +++
Sbjct: 69  MVFTGISSVLSYAKQKQVDFYAGSIFLAGSIPGSMIGAWLNQYVNMDGFYLYFGLLIIVI 128

Query: 138 GILMLKRDRLYCERKF---------------------PDNYVKYIWGMVTGFLSGALGVG 176
             +M  R +    R+                                +  G LSG  G+G
Sbjct: 129 SFIMSLRKKASKLRRNVDILEPGARSFELKGEVYIYKLSFISAISIALFVGMLSGLFGIG 188

Query: 177 GGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           GG      +ML +G   + A ATS  +   ++F   +  IY            LG V   
Sbjct: 189 GGAIMVPVMMLLFGFPAHLAAATSMFMIIFVSFMGSITHIY------------LGNVVWE 236

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            VL  +P + +   L  K+++++    L +   +++       
Sbjct: 237 YVLFFIPGAWIGGKLGAKVNHLLSNNVLELLLKVMLILVGIRM 279



 Score = 72.0 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 7/116 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I  +   G LSGLFG+GGG +MVPV+   F           H+A  TS+ +I   S M  
Sbjct: 172 ISIALFVGMLSGLFGIGGGAIMVPVMMLLFGF-------PAHLAAATSMFMIIFVSFMGS 224

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + H   G +  + +  +I    I   + + +   +  + L     +  +L+GI M+
Sbjct: 225 ITHIYLGNVVWEYVLFFIPGAWIGGKLGAKVNHLLSNNVLELLLKVMLILVGIRMI 280


>gi|228934951|ref|ZP_04097782.1| hypothetical protein bthur0009_34050 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228824851|gb|EEM70652.1| hypothetical protein bthur0009_34050 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 267

 Score = 76.3 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I           + + S + S +   
Sbjct: 51  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKISSLIPPY 110

Query: 125 FLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYI----------WGMVTGFLSGAL 173
            L+   A    L  I M +K  +   E +     +K I           G+VTG ++G+ 
Sbjct: 111 LLHWFTAGMLFLSAIFMCIKLIKFQNEEEVRLVKIKDISKENIMKCICLGLVTGMMAGSF 170

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 171 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 218

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 219 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK--FSMIM 255



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I    ++G ++G FG+G    +   L            + +  ++GT++ VI P +
Sbjct: 153 IMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTMLVILPIA 205

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           +   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 206 IGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK 250


>gi|228966574|ref|ZP_04127625.1| hypothetical protein bthur0004_33830 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228793096|gb|EEM40648.1| hypothetical protein bthur0004_33830 [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 245

 Score = 76.3 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         I + + S   S +   
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 88

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +  ++ +++    Y                G+VTG ++G+ 
Sbjct: 89  LLHWFTAGMLFLSAIFMFIKLIMFQKKEQSSLYKHKEFSVNYLLKCVCLGLVTGMMAGSF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 149 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 196

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 197 DYILLLQVLIGTMLGAYIGAKFTNYAPRTLLR--FSMIM 233



 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K+  V+Y+   +    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 124 KEFSVNYLLKCVCLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 176

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  ++ L 
Sbjct: 177 LVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRTLLR 228


>gi|238751943|ref|ZP_04613428.1| Inner membrane protein yfcA [Yersinia rohdei ATCC 43380]
 gi|238709777|gb|EEQ02010.1| Inner membrane protein yfcA [Yersinia rohdei ATCC 43380]
          Length = 268

 Score = 76.3 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 96/234 (41%), Gaps = 25/234 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ + + L+G +  + G GGGL+ VP L            +    A+ T+       S  
Sbjct: 13  ILFLVALLAGFIDSIAG-GGGLLTVPALLAV--------GLPPAQALATNKLQSVGGSFS 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +   R G +N+K  +  I +  + +++ ++++ H+    L +   +  + +G+  L  
Sbjct: 64  ASLYFIRRGAVNLKEQRLTIALTMVGSMLGAILVQHMRADILRQILPLLVIGIGLYFLVT 123

Query: 145 DRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSA 200
            +L     +R+        I G   GF  G  G G G F  L  +   G ++ K+TA + 
Sbjct: 124 PKLGEVDQQRRLSAVPFALIAGGGVGFYDGFFGPGAGSFYALAFVTLCGFNLAKSTAHAK 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            ++       L+  I  G  +     WS+G       L++L   +L   L   +
Sbjct: 184 VLNFTSNVGGLIFFIIGGKVV-----WSIG-------LVMLVGQVLGARLGAHM 225


>gi|228899459|ref|ZP_04063716.1| hypothetical protein bthur0014_6810 [Bacillus thuringiensis IBL
           4222]
 gi|228860216|gb|EEN04619.1| hypothetical protein bthur0014_6810 [Bacillus thuringiensis IBL
           4222]
          Length = 235

 Score = 76.3 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 91/241 (37%), Gaps = 14/241 (5%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           + G+GG ++  P++     L+G       H   G +   +   +      +R+   ++  
Sbjct: 1   MVGIGGAIINYPMILYIPVLLGFT-GYTSHEVSGITAVQVFFATFAGAWAYRKSNDMDKT 59

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV 158
           ++      + I + + S   + +++  +N  +A    +  I+M    R        + ++
Sbjct: 60  LVVYMGASILIGSFIGSFGANVLEEHTVNVVYAALATIAAIMMFVPKRNNSGEVTYNKWL 119

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYS 217
             +   + G  SG +G GG      +ML      I    ATS  ++ + +      ++ +
Sbjct: 120 ASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRTTIATSIAITFISSVGITTGKVIT 179

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G             V I A++ I   SI   PL  ++     +K L    S+++  T+  
Sbjct: 180 GQV-----------VVIPALI-IAVASIFAAPLGVRVGKGTNQKALQYMLSILIVGTAVK 227

Query: 278 F 278
            
Sbjct: 228 M 228


>gi|228902172|ref|ZP_04066335.1| hypothetical protein bthur0014_33510 [Bacillus thuringiensis IBL
           4222]
 gi|228857452|gb|EEN01949.1| hypothetical protein bthur0014_33510 [Bacillus thuringiensis IBL
           4222]
          Length = 245

 Score = 76.3 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         I + + S   S +   
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 88

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +  ++ +++    Y                G+VTG ++G+ 
Sbjct: 89  LLHWFTAGMLFLSAIFMFIKLIMFQKKEQSSLYKHKEFSVKYLLKCVCLGLVTGMMAGSF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 149 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 196

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 197 DYILLLQVLIGTMLGAYIGAKFTNYAPRTLLR--FSMIM 233



 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K+  V Y+   +    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 124 KEFSVKYLLKCVCLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 176

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  ++ L 
Sbjct: 177 LVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRTLLR 228


>gi|226327961|ref|ZP_03803479.1| hypothetical protein PROPEN_01843 [Proteus penneri ATCC 35198]
 gi|225203665|gb|EEG86019.1| hypothetical protein PROPEN_01843 [Proteus penneri ATCC 35198]
          Length = 185

 Score = 76.3 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 69/180 (38%), Gaps = 4/180 (2%)

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR---LYCERKFPDNYVK 159
               +    ++ +L+   V+ +++   F  +  +  +    R          K      +
Sbjct: 4   LFIGIAFGGILGALLALTVEGTWIKCIFIGYLFITILDCYFRPGFIAPTHNTKKVTKAKE 63

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            I G V G ++  LGVGG + T  L+   G  + ++ A +  ++  +A  A    +   +
Sbjct: 64  SINGTVIGIIAAFLGVGGSVMTVPLLRRRGTPMAQSAAMANVLTLPLALTATFTYVALSF 123

Query: 220 GLN-GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                     +G++ + A LI++  + +   ++ +    I  K+    + +++     V 
Sbjct: 124 TSPLNGESGFIGYIWLKAALILICSTWVGLKISERFLSRIPDKWHARIYPLLLSLVLIVM 183


>gi|148258007|ref|YP_001242592.1| hypothetical protein BBta_6796 [Bradyrhizobium sp. BTAi1]
 gi|146410180|gb|ABQ38686.1| putative membrane protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 286

 Score = 76.3 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 95/263 (36%), Gaps = 25/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L  ++  L G   GL G GG ++ VP++     +         HVA+GTS   +A  +
Sbjct: 28  LALGSLSGSLVGFTLGLIGGGGSVLAVPLMVYLVGVGNP------HVAIGTSAVAVAVNA 81

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + + H R G +       +     +  +  S +   VD   L   FA+  +++G+LML
Sbjct: 82  AANLVNHARSGHVKWPCALIFAAAGMVGALAGSTLGKMVDGQKLLLLFALVMIVIGLLML 141

Query: 143 KRDRLYCERKF----PDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           ++     +        +      +G+ TG LSG  G+GGG      LM   G  I  A  
Sbjct: 142 RKRGTDSQLDVRLSRRNLLPLLAFGLGTGTLSGFFGIGGGFLIVPALMFATGMPILSAIG 201

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +S                 SG             V+     I L   I       +L+  
Sbjct: 202 SSLVSVTTFGLTTAANYALSGL------------VDWTLAGIFLIAGIAGGLAGARLAAR 249

Query: 258 IGKKY--LTIGFSMIMFTTSFVF 278
           +      L   F+ ++F  +   
Sbjct: 250 LSATRGTLNKVFATMVFAVAAYM 272



 Score = 36.2 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 9/122 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++     +GTLSG FG+GGG ++VP L  A         + +  A+G+SL  +    + +
Sbjct: 162 LLAFGLGTGTLSGFFGIGGGFLIVPALMFA-------TGMPILSAIGSSLVSVTTFGLTT 214

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS--FLNKAFAIFCLLMGILMLK 143
              +   G ++  +   ++       +  + + + +  +   LNK FA     +   M+ 
Sbjct: 215 AANYALSGLVDWTLAGIFLIAGIAGGLAGARLAARLSATRGTLNKVFATMVFAVAAYMIY 274

Query: 144 RD 145
           R 
Sbjct: 275 RS 276


>gi|228947289|ref|ZP_04109583.1| hypothetical protein bthur0007_34190 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228812536|gb|EEM58863.1| hypothetical protein bthur0007_34190 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 267

 Score = 76.3 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I           + + S + S +   
Sbjct: 51  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSLIPPY 110

Query: 125 FLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYI----------WGMVTGFLSGAL 173
            L+   A    L  I M +K  +   E +     +K I           G+VTG ++G+ 
Sbjct: 111 LLHWFTAGMLFLSAIFMCIKLIKFQNEEEVRLVKIKDISKENIMKCICLGLVTGMMAGSF 170

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 171 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 218

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 219 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK--FSMIM 255



 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I    ++G ++G FG+G    +   L            + +  ++GT++ VI P +
Sbjct: 153 IMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTMLVILPIA 205

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           +   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 206 IGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK 250


>gi|313499975|gb|ADR61341.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 249

 Score = 76.3 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 82/228 (35%), Gaps = 17/228 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++          +   + 
Sbjct: 29  AIPALGVLFGLDQQLAQGTALVMVVPNVLLALWRYHQRNRIALRHALPLSVCSFLFAWLG 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMG----ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           S+    +D   +   F  F + +     + M  +                + G   G + 
Sbjct: 89  SIWAVGLDAHSMRLGFVGFLVALAVWNVVRMFMKVSPPSAELRHAWPWLGVLGSFAGTMG 148

Query: 171 GALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G  GVGG +    ++   +GA+   A   S  ++A      L+       G++    W +
Sbjct: 149 GLFGVGGAVVATPILTSVFGATQVVAQGLSLALAAPSTLVTLVTY-----GVHHSVDWGV 203

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G       + +    +L      KL++ + +K L   F + +   + +
Sbjct: 204 G-------IPLAVGGLLSISWGVKLAHALPEKVLRAMFCVFLVVCAVM 244



 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 55/117 (47%), Gaps = 7/117 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            + V    +GT+ GLFGVGG +V  P+L+  F    +       VA G SL + AP++++
Sbjct: 136 WLGVLGSFAGTMGGLFGVGGAVVATPILTSVFGATQV-------VAQGLSLALAAPSTLV 188

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + + +  H +++  +         ++      +   + +  L   F +F ++  +++
Sbjct: 189 TLVTYGVHHSVDWGVGIPLAVGGLLSISWGVKLAHALPEKVLRAMFCVFLVVCAVML 245


>gi|148549058|ref|YP_001269160.1| hypothetical protein Pput_3852 [Pseudomonas putida F1]
 gi|148513116|gb|ABQ79976.1| protein of unknown function DUF81 [Pseudomonas putida F1]
          Length = 261

 Score = 75.9 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 82/228 (35%), Gaps = 17/228 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++          +   + 
Sbjct: 41  AIPALGVLFGLDQQLAQGTALVMVVPNVLLALWRYHQRNRIALRHALPLSACSFLFAWLG 100

Query: 115 SLMISHVDKSFLNKAFAIFCLLMG----ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           S+    +D   +   F  F + +     + M  +                + G   G + 
Sbjct: 101 SIWAVGLDAHSMRLGFVGFLVALAVWNVVRMFMKVSPPSAELRHAWPWLGVLGSFAGTMG 160

Query: 171 GALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G  GVGG +    ++   +GA+   A   S  ++A      L+       G++    W +
Sbjct: 161 GLFGVGGAVVATPILTSVFGATQVVAQGLSLALAAPSTLVTLVTY-----GVHHSVDWGV 215

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G       + +    +L      KL++ + +K L   F + +   + +
Sbjct: 216 G-------IPLAVGGLLSISWGVKLAHALPEKVLRAMFCVFLVVCAVM 256



 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 55/117 (47%), Gaps = 7/117 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            + V    +GT+ GLFGVGG +V  P+L+  F    +       VA G SL + AP++++
Sbjct: 148 WLGVLGSFAGTMGGLFGVGGAVVATPILTSVFGATQV-------VAQGLSLALAAPSTLV 200

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + + +  H +++  +         ++      +   + +  L   F +F ++  +++
Sbjct: 201 TLVTYGVHHSVDWGVGIPLAVGGLLSISWGVKLAHALPEKVLRAMFCVFLVVCAVML 257


>gi|327484408|gb|AEA78815.1| hypothetical protein VCLMA_A1605 [Vibrio cholerae LMA3894-4]
          Length = 258

 Score = 75.9 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 94/264 (35%), Gaps = 28/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+       S
Sbjct: 9   IMVLALVAFIAGFIDAVAG-GGGMLTVPALLSL--------GLPPHLALGTNKLAATFAS 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R    +    K       I  ++ +L +  +   +L K   +  L   +  +
Sbjct: 60  STAAWTYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTV 119

Query: 143 KRDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +     E+             + + G+  GF  G  G G G F T   M  Y  +I  A
Sbjct: 120 LQRPHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILLA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++    F +L+                LG ++    L +    +    +    +
Sbjct: 180 SGLAKAMNLTSNFTSLVTFAL------------LGHIDWLLGLTMGVCLMAGAYVGAHSA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G  ++   F +++   +   A
Sbjct: 228 IRFGAPFIRPLFILVVTILAGKLA 251


>gi|196034066|ref|ZP_03101476.1| conserved hypothetical protein [Bacillus cereus W]
 gi|218904806|ref|YP_002452640.1| hypothetical protein BCAH820_3690 [Bacillus cereus AH820]
 gi|228916305|ref|ZP_04079875.1| hypothetical protein bthur0012_35210 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228928721|ref|ZP_04091757.1| hypothetical protein bthur0010_34150 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|229123188|ref|ZP_04252394.1| hypothetical protein bcere0016_34780 [Bacillus cereus 95/8201]
 gi|195993140|gb|EDX57098.1| conserved hypothetical protein [Bacillus cereus W]
 gi|218539859|gb|ACK92257.1| conserved hypothetical protein [Bacillus cereus AH820]
 gi|228660281|gb|EEL15915.1| hypothetical protein bcere0016_34780 [Bacillus cereus 95/8201]
 gi|228831040|gb|EEM76641.1| hypothetical protein bthur0010_34150 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228843503|gb|EEM88581.1| hypothetical protein bthur0012_35210 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 267

 Score = 75.9 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I           + + S + S +   
Sbjct: 51  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSLIPPY 110

Query: 125 FLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYI----------WGMVTGFLSGAL 173
            L+   A    L  I M +K  +   E +     +K I           G+VTG ++G+ 
Sbjct: 111 LLHWFTAGMLFLSAIFMCIKLIKFQNEEEVRLVKIKDISKENIMKCICLGLVTGMMAGSF 170

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 171 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 218

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 219 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK--FSMIM 255



 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I    ++G ++G FG+G    +   L            + +  ++GT++ VI P +
Sbjct: 153 IMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTMLVILPIA 205

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           +   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 206 IGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK 250


>gi|288554887|ref|YP_003426822.1| putative permease [Bacillus pseudofirmus OF4]
 gi|288546047|gb|ADC49930.1| Predicted permease [Bacillus pseudofirmus OF4]
          Length = 261

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 102/261 (39%), Gaps = 18/261 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I +I +  F    +SG+ G+GG ++  P+L     ++G+  +   H   G S   +   
Sbjct: 7   FIVVIFLIGFAGSFISGMVGIGGSIIKYPMLLYIPSIVGLS-AFTAHEVSGISAVQVLFA 65

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++     +R+ G +N  ++      + I + +       +  S +N  + I  ++   +M
Sbjct: 66  TIGGVWVYRKGGYLNKTLILYMGVSVLIGSFIGGYGSRFMPGSGVNLVYGILAIIAAGMM 125

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG-----IFTNLLMLFYGASIYKAT 196
               +   +    +         +  FL G      G     I   ++++          
Sbjct: 126 FLPKKNIDDIPLEEVTFNKWLAAMLAFLVGIGAGIVGAAGAFILVPIMLIVLKIPTRMTI 185

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A+S  ++ + +  A   ++ +G             +   AV++I+  S++ +PL  K+  
Sbjct: 186 ASSLAITFISSIGAATGKVLTGQV-----------LFWPAVIMII-ASLIASPLGAKVGK 233

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            +  K L    ++++F T+  
Sbjct: 234 KMNTKILQWMLAILIFATAIK 254


>gi|269925162|ref|YP_003321785.1| protein of unknown function DUF81 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269788822|gb|ACZ40963.1| protein of unknown function DUF81 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 309

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 99/266 (37%), Gaps = 34/266 (12%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I +A  L G L G+ G+G G +M P+L    +       +   +A+G+ L     T V  
Sbjct: 56  IALAGLLVGILVGMTGMGSGALMAPLLILILK-------VKPSLAIGSDLVYATITKVFG 108

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLM-----------ISHVDKSFLNKAFAIFC 134
             +H +HG++++++            ++ +               H     L   F +  
Sbjct: 109 AFQHYKHGSVHVRLTAWLAIGSVPGALLGAESVELIHRSYGDDAEHFITKVLAITFMLVS 168

Query: 135 LLMGILMLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
             + +      + Y +    +       +  I G   GFL G   VG G     +++ + 
Sbjct: 169 TSIILRTFLPIKSYSKANMENFSLTRKILTPILGFFVGFLVGLTSVGSGSLLMPILIMF- 227

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +     TS  V   I    LL       G  G   +  G V++  V  +L  S+    
Sbjct: 228 YPMP----TSTLVGTDIFHAVLLT------GAAGASHFMAGNVDLILVSNLLIGSVPGIV 277

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTS 275
           L ++L  ++ ++ L    ++++F T 
Sbjct: 278 LGSRLVKVVPERLLRTILAIVLFLTG 303



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 45/117 (38%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +  F  G L GL  VG G +++P+L   +        +     +GT +      +  +  
Sbjct: 200 ILGFFVGFLVGLTSVGSGSLLMPILIMFYP-------MPTSTLVGTDIFHAVLLTGAAGA 252

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            H   G +++ ++ + +       V+ S ++  V +  L    AI   L G  +   
Sbjct: 253 SHFMAGNVDLILVSNLLIGSVPGIVLGSRLVKVVPERLLRTILAIVLFLTGWKLWLN 309


>gi|301055163|ref|YP_003793374.1| membrane protein [Bacillus anthracis CI]
 gi|300377332|gb|ADK06236.1| conserved hypothetical membrane protein [Bacillus cereus biovar
           anthracis str. CI]
          Length = 267

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I           + + S + S +   
Sbjct: 51  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSLIPPY 110

Query: 125 FLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYI----------WGMVTGFLSGAL 173
            L+   A    L  I M +K  +   E +     +K I           G+VTG ++G+ 
Sbjct: 111 LLHWFTAGMLFLSAIFMCIKLIKFQNEEEVRLVKIKDISKENIMKCICLGLVTGMMAGSF 170

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 171 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 218

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 219 DYILLLQVLIGTMLGAYIGAKYTNYAPRMLLK--FSMIM 255



 Score = 39.3 bits (91), Expect = 0.69,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I    ++G ++G FG+G    +   L            + +  ++GT++ VI P +
Sbjct: 153 IMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTMLVILPIA 205

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           +   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 206 IGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKYTNYAPRMLLK 250


>gi|228909494|ref|ZP_04073319.1| hypothetical protein bthur0013_36460 [Bacillus thuringiensis IBL
           200]
 gi|228850271|gb|EEM95100.1| hypothetical protein bthur0013_36460 [Bacillus thuringiensis IBL
           200]
          Length = 245

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         I + + S   S +   
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 88

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +  ++  ++    Y                G+VTG ++G+ 
Sbjct: 89  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKEFSVNYLLKCVCLGLVTGMMAGSF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 149 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 196

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 197 DYILLLQVLIGTMLGAYIGAKFTNYAPRTLLR--FSMIM 233



 Score = 42.0 bits (98), Expect = 0.090,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K+  V+Y+   +    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 124 KEFSVNYLLKCVCLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 176

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  ++ L 
Sbjct: 177 LVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRTLLR 228


>gi|229092069|ref|ZP_04223252.1| hypothetical protein bcere0021_28610 [Bacillus cereus Rock3-42]
 gi|228691234|gb|EEL44997.1| hypothetical protein bcere0021_28610 [Bacillus cereus Rock3-42]
          Length = 336

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 92/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A  
Sbjct: 30  TITGGFFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE- 87

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   V +  +S++    +    ++
Sbjct: 88  ------VVTTAASGASHLKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISL 141

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R     ++    K          G+  GF+    G G G  T  ++L  
Sbjct: 142 FLFTLGVYILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLAR 201

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       +A  A +    S GW            V+   V  ++   I+ 
Sbjct: 202 GNEARKVIGSVDTSEFPVALAATIGFFISLGWEQ----------VSWVWVFALMLGGIVA 251

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  ++    L +    ++  T+  
Sbjct: 252 APIAAWLVRIVPSHLLGVLVGGLIIFTNIR 281


>gi|57865552|ref|YP_189743.1| hypothetical protein SERP2187 [Staphylococcus epidermidis RP62A]
 gi|57636210|gb|AAW52998.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
          Length = 299

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 89/259 (34%), Gaps = 24/259 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +A FL+  + GL G+G G       S      GI  ++       T       T+
Sbjct: 4   VLIFAIAGFLAQLVDGLLGMGFGA----SSSSILLTYGIAPAVV----SATVHFSEIATT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H R   ++   +        I+  + + +++ +   ++    A+F L MG  +L
Sbjct: 56  AASGTSHWRFDNVHKPTMLKLAIPGSISAFIGAGVLTFIHGDYIKPFIALFLLSMGFYIL 115

Query: 143 KRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKA 195
            +       +         ++     G V GFL    G G G     L+L         A
Sbjct: 116 YQFLFKRAHEHHHHVGDLSSFKVIPQGFVAGFLDAIGGGGWGPVNTPLLLSSKKIQPRYA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T +     +   A L  I    G+          +N  AV+ +    ++  P++  L 
Sbjct: 176 IGTVSASEFFVTSSAALSFIIF-LGVTQ--------INWFAVIALSLGGMVAAPISAYLV 226

Query: 256 YMIGKKYLTIGFSMIMFTT 274
            ++    L I    ++  T
Sbjct: 227 KVLPINILAICVGGLIIFT 245


>gi|329737791|gb|EGG74030.1| putative membrane protein [Staphylococcus epidermidis VCU045]
          Length = 246

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 106/252 (42%), Gaps = 14/252 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++++     G +SGL G+GG +++   +      +    +   ++A G +   +  ++
Sbjct: 1   MIIMLLIGIFGGFISGLVGIGGAIIIY-PMLLLLPPLVGLPTYSAYIASGLTSSQVFFST 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +    +  ++   +  ++ +    + I +++ +++ + ++  F+N  + I  LL  ILM 
Sbjct: 60  LSGSFKAYKNKDFSRTLVLNMGSGMIIGSILGAILANLINVQFVNMVYIIIALLALILMF 119

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAG 201
            +          +  +    G + G + G +G GG       L++ +   +      S  
Sbjct: 120 IKVAPSTSHIKFNRLLLITIGGIIGLVFGIVGAGGAFIIIPVLLVIFKLPMNTVVTNSIV 179

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           ++ + +  A ++++              G++ + + + ++  SIL TPL  K+   I   
Sbjct: 180 IAFISSIGAFIIKLLQ------------GYIPVNSAIPLILGSILFTPLGMKIGQKIPDY 227

Query: 262 YLTIGFSMIMFT 273
              +  S+++  
Sbjct: 228 IQKMIVSILIVI 239


>gi|229097582|ref|ZP_04228541.1| hypothetical protein bcere0020_28240 [Bacillus cereus Rock3-29]
 gi|228685852|gb|EEL39771.1| hypothetical protein bcere0020_28240 [Bacillus cereus Rock3-29]
          Length = 339

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 93/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A  
Sbjct: 33  IITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE- 90

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   V +  +S++    +    +I
Sbjct: 91  ------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISI 144

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R     ++   +K          G+  GF+    G G G  T  ++L  
Sbjct: 145 FLFTLGVYILLRFIIQKQIVTSKKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLAR 204

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       ++  A +    S GW            V+   V  ++   I+ 
Sbjct: 205 GNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALMLGGIVA 254

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  ++    L +    ++  T+  
Sbjct: 255 APIAAWLVRIVPPHLLGVLVGGLIIFTNIR 284


>gi|148253368|ref|YP_001237953.1| hypothetical protein BBta_1844 [Bradyrhizobium sp. BTAi1]
 gi|146405541|gb|ABQ34047.1| putative membrane protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 260

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 102/255 (40%), Gaps = 30/255 (11%)

Query: 35  TLSGLFGV--GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPTSVMSFMEHR- 90
             SGL GV  GGGLV+  VL               HVA G SL   I PTS+     +R 
Sbjct: 19  FTSGLLGVSPGGGLVVFAVLLL---------GAEQHVAQGLSLVAQIPPTSLAGIKRYRD 69

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
             G ++  ++        +  V+ +++ +    + L  A+ I+ LL+ +L+L+R      
Sbjct: 70  EGGRVSPSMVVWLGSGFLLGGVIGAVIANGTAATVLQWAYVIYLLLLDVLLLRRSSHREP 129

Query: 151 RKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVS 203
            +       P        G   G  SG LG+GGG+ T + +    G + ++A   S  ++
Sbjct: 130 AQTMDAELDPGALALLGVGCAAGVSSGFLGIGGGLATVVGLSAVLGMAQHRAQMISLVLT 189

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
                P  +   +  W    LPPWS        +L ++   ++ T +  +L+  +    L
Sbjct: 190 L---VPTTIPSAWIYWRHGALPPWST-------LLTVIIGLVIGTDVGARLANAVSPARL 239

Query: 264 TIGFSMIMFTTSFVF 278
            +     +   +   
Sbjct: 240 RVLLIGFVSVMALYM 254



 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 7/122 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++     +G  SG  G+GGGL  V  LS      G+       +++   +  + PT++
Sbjct: 142 LALLGVGCAAGVSSGFLGIGGGLATVVGLSAVL---GMAQHRAQMISL---VLTLVPTTI 195

Query: 84  MSFMEHRRHGTIN-MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            S   + RHG +     L   I  L I T V + + + V  + L      F  +M + M 
Sbjct: 196 PSAWIYWRHGALPPWSTLLTVIIGLVIGTDVGARLANAVSPARLRVLLIGFVSVMALYMT 255

Query: 143 KR 144
            +
Sbjct: 256 VK 257


>gi|229173712|ref|ZP_04301254.1| hypothetical protein bcere0006_28120 [Bacillus cereus MM3]
 gi|228609811|gb|EEK67091.1| hypothetical protein bcere0006_28120 [Bacillus cereus MM3]
          Length = 336

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 93/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A  
Sbjct: 30  IITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE- 87

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   + +  +S++    +    ++
Sbjct: 88  ------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFIGACFLSNLPGDVIKPYISV 141

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R     ++   +K          G+  GF+    G G G  T  ++L  
Sbjct: 142 FLFTLGVYILLRFLIQKQIVTSKKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLAR 201

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       ++  A +    S GW            V+   V  ++   I+ 
Sbjct: 202 GNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALMLGGIVA 251

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  +I    L +    ++  T+  
Sbjct: 252 APIAAWLVRIIPAHLLGVLVGGLIIFTNIR 281


>gi|229185908|ref|ZP_04313081.1| hypothetical protein bcere0004_34560 [Bacillus cereus BGSC 6E1]
 gi|228597620|gb|EEK55267.1| hypothetical protein bcere0004_34560 [Bacillus cereus BGSC 6E1]
          Length = 267

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I           + + S + S +   
Sbjct: 51  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSFIPPY 110

Query: 125 FLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYI----------WGMVTGFLSGAL 173
            L+   A    L  I M +K  +   E +     +K I           G+VTG ++G+ 
Sbjct: 111 LLHWFTAGMLFLSAIFMCIKLIKFQNEEEVRLVKIKDISKENIMKCICLGLVTGMMAGSF 170

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L +M+  G +I ++  T+  V   IA    L               S G++
Sbjct: 171 GIGSAPFIQLGIMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 218

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 219 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK--FSMIM 255



 Score = 38.1 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I    ++G ++G FG+G    +   +            + +  ++GT++ VI P +
Sbjct: 153 IMKCICLGLVTGMMAGSFGIGSAPFIQLGIMVLL-------GLTIQQSVGTTMLVILPIA 205

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           +   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 206 IGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK 250


>gi|196044637|ref|ZP_03111872.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|225865656|ref|YP_002751034.1| hypothetical protein BCA_3772 [Bacillus cereus 03BB102]
 gi|196024672|gb|EDX63344.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|225790833|gb|ACO31050.1| putative membrane protein [Bacillus cereus 03BB102]
          Length = 267

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I           + + S + S +   
Sbjct: 51  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSFIPPY 110

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERK-----------FPDNYVKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +   +   +             +       G+VTG ++G+ 
Sbjct: 111 LLHWFTAGMLFLSAIFMCIKLIKFQNEEEVCLVKIKDISKENIMKCICLGLVTGMMAGSF 170

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 171 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 218

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 219 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK--FSMIM 255



 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I    ++G ++G FG+G    +   L            + +  ++GT++ VI P +
Sbjct: 153 IMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTMLVILPIA 205

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           +   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 206 IGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK 250


>gi|170721027|ref|YP_001748715.1| hypothetical protein PputW619_1843 [Pseudomonas putida W619]
 gi|169759030|gb|ACA72346.1| protein of unknown function DUF81 [Pseudomonas putida W619]
          Length = 259

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 99/261 (37%), Gaps = 25/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++ + +F++G +  + G GGGL+  P L  A    G+      H+ +GT+       S
Sbjct: 12  LLILALVAFVAGFIDAIAG-GGGLLTTPALLTA----GMPP----HLVLGTNKLSSTFGS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + +    +    +  +F   +  ++ +++  ++   +LNK   +     GI +L
Sbjct: 63  ATAGFTYYKRKLFHPAQWRPALFATLVGALIGAVVAHYMPAEWLNKMLPVIVFACGIYLL 122

Query: 143 KRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATAT 198
                              ++  G   GF  G  G G G F T   +L Y   + +A+  
Sbjct: 123 FGGTPKAPLDADAPIRKKWQFPQGFTLGFYDGVAGPGTGAFWTVSTLLLYPIDLVRASGV 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++ +    AL V I SG        + +G       L +    ++      + +   
Sbjct: 183 ARSMNFVSNIAALTVFIISGQ-----VDYVVG-------LCMGLSVMVGAFFGARTAISG 230

Query: 259 GKKYLTIGFSMIMFTTSFVFA 279
           G K++   F  ++   +   A
Sbjct: 231 GSKFIRPVFITVVLALTVRLA 251


>gi|228928127|ref|ZP_04091171.1| hypothetical protein bthur0010_28290 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228946669|ref|ZP_04108977.1| hypothetical protein bthur0007_28070 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229122622|ref|ZP_04251833.1| hypothetical protein bcere0016_29160 [Bacillus cereus 95/8201]
 gi|228660874|gb|EEL16503.1| hypothetical protein bcere0016_29160 [Bacillus cereus 95/8201]
 gi|228812966|gb|EEM59279.1| hypothetical protein bthur0007_28070 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228831544|gb|EEM77137.1| hypothetical protein bthur0010_28290 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 336

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 92/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A  
Sbjct: 30  TITGGFFMQKLIIFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE- 87

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   V +  +S++    +    ++
Sbjct: 88  ------VVTTAASGASHLKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISL 141

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R     ++    K          G+  GF+    G G G  T  ++L  
Sbjct: 142 FLFTLGVYILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLAR 201

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       +A  A +    S GW            V+   V  ++   I+ 
Sbjct: 202 GNEARKVIGSVDTSEFPVALAATIGFFISLGWEQ----------VSWFWVFALMLGGIVA 251

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  ++    L +    ++  T+  
Sbjct: 252 APIAAWLVRIVPSHLLGVLVGGLIIFTNIR 281


>gi|228940167|ref|ZP_04102738.1| hypothetical protein bthur0008_28160 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228973058|ref|ZP_04133650.1| hypothetical protein bthur0003_28210 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228979644|ref|ZP_04139971.1| hypothetical protein bthur0002_28210 [Bacillus thuringiensis Bt407]
 gi|228780100|gb|EEM28340.1| hypothetical protein bthur0002_28210 [Bacillus thuringiensis Bt407]
 gi|228786617|gb|EEM34604.1| hypothetical protein bthur0003_28210 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228819293|gb|EEM65347.1| hypothetical protein bthur0008_28160 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326940817|gb|AEA16713.1| hypothetical protein CT43_CH3039 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 336

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
             S    ++    +  + +  +  F +  + G  G+  G+     L   F +     S  
Sbjct: 24  KVSFSFIITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASAS 82

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +H+A          T+  S   H + G ++   +        I   V +  +S++    +
Sbjct: 83  VHLAE-------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVI 135

Query: 127 NKAFAIFCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
               ++F   +G+ +L R     ++    K          G+  GF+    G G G  T 
Sbjct: 136 KPYISVFLFTLGVYILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITT 195

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIIL 241
            ++L  G    K   +       ++  A +    S GW            V+   V  ++
Sbjct: 196 PVLLARGNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALM 245

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              I+  P+A  L  ++    L +    ++  T+  
Sbjct: 246 LGGIVAAPIAAWLVRIVPAHLLGVLVGGLIIFTNIR 281


>gi|294495976|ref|YP_003542469.1| hypothetical protein Mmah_1325 [Methanohalophilus mahii DSM 5219]
 gi|292666975|gb|ADE36824.1| protein of unknown function DUF81 [Methanohalophilus mahii DSM
           5219]
          Length = 257

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 99/242 (40%), Gaps = 19/242 (7%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
            G+GG ++ VP+             I + +A+  SL +   T+  S   + R  TI+   
Sbjct: 22  LGIGGAVIYVPLFYWI--------GIDLRIAIPLSLLLNVVTTGSSSFIYLRKKTIDFHA 73

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK 159
              ++    I   +   + + + ++ +   F+   +L+G++M+           P +  +
Sbjct: 74  AIPFLVFSVIGAPIGKYIGTQISENAIISIFSFVIVLVGLIMMAPGSRNAILPKPADKKR 133

Query: 160 YIWGMVTGFL----SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            + G++ G      +G LG+GGG F   L+L +G  + +A ATS+    LI   +    +
Sbjct: 134 LLMGLLVGLGAGVCAGLLGIGGGSFVVPLLLAFGYGVREAAATSS----LIVLVSSASGL 189

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPIS-ILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            +      L   ++  + + A +     S I+ TP     +    +KY    F + +   
Sbjct: 190 VAHLNNISLTDSTVISLGLAAFIGSQLGSHIMYTPRGNLEA--FSRKYFKNIFGLFLIVV 247

Query: 275 SF 276
           + 
Sbjct: 248 AL 249



 Score = 43.5 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 45/117 (38%), Gaps = 15/117 (12%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           +GL G+GGG  +VP+L              +  A  TS  ++  +S    + H  + ++ 
Sbjct: 148 AGLLGIGGGSFVVPLLLAF--------GYGVREAAATSSLIVLVSSASGLVAHLNNISLT 199

Query: 97  MKILKDWIFVLPITTVVTSLMI-------SHVDKSFLNKAFAIFCLLMGILMLKRDR 146
              +        I + + S ++           + +    F +F +++ +L+  R  
Sbjct: 200 DSTVISLGLAAFIGSQLGSHIMYTPRGNLEAFSRKYFKNIFGLFLIVVALLLQYRVH 256


>gi|167461374|ref|ZP_02326463.1| hypothetical protein Plarl_02228 [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322381967|ref|ZP_08055917.1| hypothetical protein PL1_0738 [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321154107|gb|EFX46435.1| hypothetical protein PL1_0738 [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 315

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 87/231 (37%), Gaps = 31/231 (13%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           ++ +L+  F        I +H A+ TSL  +A T++     H R G  ++K         
Sbjct: 90  IIAILTFLFH-------IPIHTALATSLAAMAFTTLSGAFSHYREGNTSVKTGLITGGFG 142

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR----------DRLYCERKFPDNY 157
                  S + + +    L+   A    L   L++ R          ++    R+    +
Sbjct: 143 LTGAFAGSKVSALIPADSLHWLTAGMLFLSSFLLMVRLVVFDRYTQHNQTAKHRESSLFW 202

Query: 158 VKYI-WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
           +K I  G+ TGFL+G  G+G   F  + L+   G SI ++  T+  +   IA        
Sbjct: 203 LKCISLGIATGFLAGTFGIGSTPFIQIGLLTMLGLSIRQSVGTTMLIILFIAIGGGTGFS 262

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
                       + GF+++  ++ +L  ++    +  K +    K  L   
Sbjct: 263 ------------TKGFLDVTLLIQVLAGTMCGACIGAKFTGHAPKPLLKTA 301


>gi|85705724|ref|ZP_01036821.1| membrane protein [Roseovarius sp. 217]
 gi|85669714|gb|EAQ24578.1| membrane protein [Roseovarius sp. 217]
          Length = 304

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 94/277 (33%), Gaps = 53/277 (19%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG ++ P+L       GI  +    VA+ T    I   S  + + H R  T++
Sbjct: 28  SGMFGVGGGFILTPLLFFI----GIPPA----VAVATGANQIMAASFSAVLAHFRRKTVD 79

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGILML--------- 142
           +++    +    I   +   + +++         +   + +F  ++G +M          
Sbjct: 80  LEMGTVLLIGGLIGAAMGVFVFNYLKSLGQVDLLVTLCYVVFLGVIGGMMFIESLRSIRN 139

Query: 143 -------------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
                               + R      +       + G   G L+  +GVGGG     
Sbjct: 140 TRRGVVPKRKKHGWVHRLPFKMRFRTSGLYISVIPPLLVGTSVGILAAIMGVGGGFIMVP 199

Query: 184 LMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            M++  G        TS      +     L+   + +            V+I   +++L 
Sbjct: 200 AMIYLLGMPTKVVVGTSLFQIIFVTAFTTLLHATTNYT-----------VDIALAVLLLV 248

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             ++     T +   +  + L I  ++++       A
Sbjct: 249 GGVIGAQFGTSIGTRMKAEQLRILLAIMVLAVCGKLA 285


>gi|325273444|ref|ZP_08139693.1| hypothetical protein G1E_10383 [Pseudomonas sp. TJI-51]
 gi|324101421|gb|EGB99018.1| hypothetical protein G1E_10383 [Pseudomonas sp. TJI-51]
          Length = 259

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 98/261 (37%), Gaps = 25/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++ + +F++G +  + G GGGL+  P L  A    G+      H+ +GT+       S
Sbjct: 12  LLILALVAFVAGFIDAIAG-GGGLLTTPALLTA----GMPP----HLVLGTNKLSSTFGS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + +    +    +  +F   +  ++ +++  ++   +LNK   +     G+ +L
Sbjct: 63  ATASFTYYKRKLFHPAQWRPALFATLVGALIGAIVAHYMPAEWLNKMLPVIVFACGLYLL 122

Query: 143 KRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATAT 198
                              +   G   GF  G  G G G F T   +L Y   + +A+  
Sbjct: 123 FGGTPKAPLDADAPIRKKWQAPQGFTLGFYDGVAGPGTGAFWTVSTLLLYPIDLVRASGV 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++ +    AL V I SG        + +G       L +    ++      + +   
Sbjct: 183 ARSMNFVSNIAALTVFIISGQ-----VDYIVG-------LCMGLSVMVGAFFGARTAISG 230

Query: 259 GKKYLTIGFSMIMFTTSFVFA 279
           G K++   F  ++   +   A
Sbjct: 231 GSKFIRPVFITVVLALTVRLA 251


>gi|229092652|ref|ZP_04223800.1| hypothetical protein bcere0021_34120 [Bacillus cereus Rock3-42]
 gi|228690679|gb|EEL44456.1| hypothetical protein bcere0021_34120 [Bacillus cereus Rock3-42]
          Length = 267

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I           + + S + S +   
Sbjct: 51  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSLIPPY 110

Query: 125 FLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYI----------WGMVTGFLSGAL 173
            L+   A    +  I M +K  +   E +     +K I           G+VTG ++G+ 
Sbjct: 111 LLHWFTAGMLFVSAIFMCIKLIKFQNEEEVRLVKIKDISKENIMKCICLGLVTGMMAGSF 170

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 171 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 218

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 219 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK--FSMIM 255



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I    ++G ++G FG+G    +   L            + +  ++GT++ VI P +
Sbjct: 153 IMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTMLVILPIA 205

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           +   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 206 IGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK 250


>gi|317492680|ref|ZP_07951107.1| hypothetical protein HMPREF0864_01871 [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919430|gb|EFV40762.1| hypothetical protein HMPREF0864_01871 [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 270

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 97/238 (40%), Gaps = 25/238 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + ++   + L+G +  + G GGGL+ VP L       G+  +     A+ T+      
Sbjct: 13  EMLGILFFVAMLAGFIDSIAG-GGGLLTVPALLAV----GVPPAQ----ALATNKLQSVG 63

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R   +++   K  I +  I +++ S+++ ++    L +   I    +GI 
Sbjct: 64  GSFSASLYFIRRKAVDLNDQKLVIALTFIGSMIGSILVQNMRADILRQLLPILVAGIGIY 123

Query: 141 MLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L   RL     +R+        + G   GF  G  G G G F  L  +   G ++ K+T
Sbjct: 124 FLLTPRLGESDRQRRLSYIPFAIVAGCCVGFYDGFFGPGAGSFYALAYVTLCGFNLAKST 183

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A +  ++      ALL  +  G  +     WS+G       L++L   ++      K+
Sbjct: 184 AHAKVLNFTSNLAALLFFMLGGKVI-----WSIG-------LVMLVGQVIGARTGAKM 229


>gi|52144544|ref|YP_082283.1| hypothetical protein BCZK0678 [Bacillus cereus E33L]
 gi|51978013|gb|AAU19563.1| probable membrane protein [Bacillus cereus E33L]
          Length = 254

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 101/260 (38%), Gaps = 14/260 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +  F+   +SG+ G+GG ++  P++     L+G       H   G +   + 
Sbjct: 1   MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFT-GYTAHEVSGITAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      +R+   ++  ++      + I + + S   + +++  +N  +A    +  I
Sbjct: 60  FATFAGAWAYRKSNDMDKTLVVYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAI 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           +M    R   +    + ++  +     G  SG +G GG      +ML      I    AT
Sbjct: 120 MMFVPKRNNGDELKYNKWLASLLAFSVGGASGIIGAGGSFLLVPIMLVILKLPIRTTIAT 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  ++ + +      ++ +G             V +   LII   SI   P+  ++   I
Sbjct: 180 SIAITFISSVGITTGKVITGQ------------VVVMPALIIAIASIFAAPIGARVGKRI 227

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            +K L    S+++  T+   
Sbjct: 228 NQKALQYMLSILIVGTAVKM 247


>gi|229197240|ref|ZP_04323971.1| hypothetical protein bcere0001_27890 [Bacillus cereus m1293]
 gi|228586199|gb|EEK44286.1| hypothetical protein bcere0001_27890 [Bacillus cereus m1293]
          Length = 336

 Score = 75.9 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 92/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A  
Sbjct: 30  TITGGFFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE- 87

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   V +  +S++    +    ++
Sbjct: 88  ------VVTTAASGASHLKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISL 141

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R     ++    K          G+  GF+    G G G  T  ++L  
Sbjct: 142 FLFTLGVYILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLAR 201

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       ++  A +    S GW            V+   V  ++   I+ 
Sbjct: 202 GNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALMLGGIVA 251

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  ++    L +    ++  T+  
Sbjct: 252 APIAAWLVRIVPSHLLGVLVGGLIIFTNIR 281


>gi|238797446|ref|ZP_04640945.1| Inner membrane protein yfcA [Yersinia mollaretii ATCC 43969]
 gi|238718717|gb|EEQ10534.1| Inner membrane protein yfcA [Yersinia mollaretii ATCC 43969]
          Length = 268

 Score = 75.9 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 96/234 (41%), Gaps = 25/234 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ V + L+G +  + G GGGL+ VP L            +    A+ T+       S  
Sbjct: 13  ILFVVALLAGFIDSIAG-GGGLLTVPTLLAV--------GLPPAQALATNKLQSVGGSFS 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +   R G +N+K  K  I +  + +++ ++++ H+    L +   +  + +G+  L  
Sbjct: 64  ASLYFIRRGAVNLKDQKLTIALTLVGSMLGAILVQHMRADILRQILPLLVIGIGVYFLVT 123

Query: 145 DRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSA 200
            +L     +R+        I G   GF  G  G G G F  L  +   G ++ K+TA + 
Sbjct: 124 PKLGEFDQKRRLSALPFALIAGGGVGFYDGFFGPGAGSFYALAFVTLCGFNLAKSTAHAK 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            ++       L+  I  G  +     WS+G       L++L   +L   L   +
Sbjct: 184 VLNFTSNVGGLIFFIVGGKVV-----WSIG-------LVMLVGQVLGARLGAHM 225


>gi|322437613|ref|YP_004219703.1| protein of unknown function DUF81 [Acidobacterium sp. MP5ACTX9]
 gi|321165506|gb|ADW71209.1| protein of unknown function DUF81 [Acidobacterium sp. MP5ACTX9]
          Length = 278

 Score = 75.9 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 53/280 (18%), Positives = 109/280 (38%), Gaps = 45/280 (16%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++++S  +G +  L G+GGG+V+ PVL+           + +  A+G SL  +  TS  
Sbjct: 9   IVLLSSIGAGLVGALTGLGGGIVVTPVLTLML-------GVDIGYAIGASLISVIATSSG 61

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL---- 140
           +   + R G  N+++         +  +  +L+   +  ++L   F +  L         
Sbjct: 62  AAAAYVRDGLSNVRVGIFLEVATTLGAISGALISGKIPTTYLAILFGLVLLHSAWQASQA 121

Query: 141 ------------MLKRDRLYCERKFPDNYVKYIWG---------MVTGFLSGALGVGGGI 179
                       + +R RL    +     V+Y+            V G LSG LG+G G 
Sbjct: 122 RVEGGVVADQGSLSRRLRLGGTYRAEGKEVEYVVSREGTGLSLMYVAGMLSGLLGIGSGA 181

Query: 180 FTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
              + M    G     +TATS+ +  + A  +  +    G+ L  +         +  ++
Sbjct: 182 LKVIAMDRVMGLPFKVSTATSSFMIGVTAVASATIYFKRGYILPQMA--------VPVMI 233

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +L  S+    +  +L   +  K L   F++++   +   
Sbjct: 234 GVLIGSM----VGARLLPRLPVKTLRRIFAIVVGMIAIQM 269



 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           +++G LSGL G+G G + V         M     +   V+  TS  +I  T+V S   + 
Sbjct: 166 YVAGMLSGLLGIGSGALKV-------IAMDRVMGLPFKVSTATSSFMIGVTAVASATIYF 218

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + G I  ++    +  + I ++V + ++  +    L + FAI   ++ I M+ +
Sbjct: 219 KRGYILPQMAVPVMIGVLIGSMVGARLLPRLPVKTLRRIFAIVVGMIAIQMIVK 272


>gi|332796188|ref|YP_004457688.1| hypothetical protein Ahos_0502 [Acidianus hospitalis W1]
 gi|332693923|gb|AEE93390.1| conserved hypothetical protein [Acidianus hospitalis W1]
          Length = 303

 Score = 75.9 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 92/290 (31%), Gaps = 48/290 (16%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-------------SICMHVA 70
            L I++  L G   GL G GG ++ VP+L     L  +                   HVA
Sbjct: 12  ILAIISGVLVGFSLGLIGGGGSILAVPLLLYFVGLATVPPQYASNPTLAHEYSDYVAHVA 71

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+   +   + ++   H R G + +     +         +            L   F
Sbjct: 72  LGTTALAVGLNAYINSYMHFRKGNVRLPEGIMFTIPGIAGATLGGYASHITPGQSLLFFF 131

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYI----------------------WGMVTGF 168
            I  + + +LML+  +              +                       G + GF
Sbjct: 132 GILMIAVALLMLRPQKQTRTISKTQTAQISLRGLSALSIKSLTSDVSIKKVIPAGFIVGF 191

Query: 169 LSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            SG  G+GGG      +LF  G  + KA  TS          +  V  Y G+    LP  
Sbjct: 192 ASGYFGIGGGFLIVPGLLFSTGLCMIKAVGTSLISVGTFGITSAAVYAYYGY---VLPLI 248

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           S+ ++  G        SI         +  + +  L   F+ I+   +  
Sbjct: 249 SIAYLVGGIAGGYAGASI---------ASRMPRGMLRKVFAGIIIAVAIY 289



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 7/118 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I A F+ G  SG FG+GGG ++VP L            +CM  A+GTSL  +    + S
Sbjct: 182 VIPAGFIVGFASGYFGIGGGFLIVPGLLF-------STGLCMIKAVGTSLISVGTFGITS 234

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              +  +G +   I   ++          + + S + +  L K FA   + + I ++ 
Sbjct: 235 AAVYAYYGYVLPLISIAYLVGGIAGGYAGASIASRMPRGMLRKVFAGIIIAVAIYIMY 292


>gi|229111095|ref|ZP_04240653.1| hypothetical protein bcere0018_33420 [Bacillus cereus Rock1-15]
 gi|228672343|gb|EEL27629.1| hypothetical protein bcere0018_33420 [Bacillus cereus Rock1-15]
          Length = 245

 Score = 75.9 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         I + + S   S +   
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 88

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +  ++  ++    Y                G+VTG ++G+ 
Sbjct: 89  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKEFSMNYLLKCICLGLVTGMMAGSF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    +               S G++
Sbjct: 149 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGIGYS------------SEGYL 196

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 197 DYILLLQVLIGTMLGAYIGAKFTNYAPRTLLR--FSMIM 233



 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K+  ++Y+   I    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 124 KEFSMNYLLKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 176

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  ++ L 
Sbjct: 177 LVILPIAIGGGIGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRTLLR 228


>gi|228940756|ref|ZP_04103318.1| hypothetical protein bthur0008_33980 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228973675|ref|ZP_04134256.1| hypothetical protein bthur0003_34310 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228980232|ref|ZP_04140545.1| hypothetical protein bthur0002_34020 [Bacillus thuringiensis Bt407]
 gi|228779501|gb|EEM27755.1| hypothetical protein bthur0002_34020 [Bacillus thuringiensis Bt407]
 gi|228786034|gb|EEM34032.1| hypothetical protein bthur0003_34310 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228818907|gb|EEM64970.1| hypothetical protein bthur0008_33980 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 245

 Score = 75.9 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         I + + S   S +   
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 88

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +  ++  ++    Y                G+VTG ++G+ 
Sbjct: 89  LLHWFTAGMLFLSAIFMFIKLIMFQNKEKSSLYKHKEFSVNYLLKCVCLGLVTGMMAGSF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    +               S G++
Sbjct: 149 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGIGYS------------SEGYL 196

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 197 DYILLLQVLIGTMLGAYIGAKFTNYAPRTLLR--FSMIM 233



 Score = 42.0 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K+  V+Y+   +    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 124 KEFSVNYLLKCVCLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 176

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  ++ L 
Sbjct: 177 LVILPIAIGGGIGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRTLLR 228


>gi|326202549|ref|ZP_08192417.1| protein of unknown function DUF81 [Clostridium papyrosolvens DSM
           2782]
 gi|325987133|gb|EGD47961.1| protein of unknown function DUF81 [Clostridium papyrosolvens DSM
           2782]
          Length = 123

 Score = 75.9 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+    +G  +GLFG GGG + VP +               H A  T+L +I P +++S
Sbjct: 13  YILIGIAAGVANGLFGSGGGTIAVPAMVFLL-------EEDEHKAHATALLIILPLTLVS 65

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              +  H  +N  I    +    +   + + +++      L K F IF +L  I M+ 
Sbjct: 66  TYFYLSHNYVNWNITWKAMTGGVMGGAIGAFLLNKCPSKILRKIFGIFMILAAIRMIF 123



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 37/120 (30%), Gaps = 13/120 (10%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGA-SIYKATATSAGVSALIAFPALLVRIYSG 218
            + G+  G  +G  G GGG      M+F      +KA AT+  +   +   +    +   
Sbjct: 14  ILIGIAAGVANGLFGSGGGTIAVPAMVFLLEEDEHKAHATALLIILPLTLVSTYFYLSHN 73

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                       +VN       +   ++   +   L      K L   F + M   +   
Sbjct: 74  ------------YVNWNITWKAMTGGVMGGAIGAFLLNKCPSKILRKIFGIFMILAAIRM 121


>gi|312115508|ref|YP_004013104.1| hypothetical protein Rvan_2796 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220637|gb|ADP72005.1| protein of unknown function DUF81 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 319

 Score = 75.9 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 103/257 (40%), Gaps = 9/257 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+I+   + G   GL G  GGL + P L     L G+       +A+ T+L ++ P ++ 
Sbjct: 12  LLILTGGVVGLCFGLLGQAGGLALAPALLIVLPLCGVTAEAAPRLAVTTALAILIPVTIG 71

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                     I+   +        +  V+ +++  ++D   +        +L+ + + +R
Sbjct: 72  QAEGRLSWKAIDWDFILLLAPGAAVGAVIAAMVADNLDGRIVALFLGSGSILLALRLSRR 131

Query: 145 ----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
               DR + E + P      +  +V G  +   GV  G+     +        +A AT++
Sbjct: 132 AGGGDRDHVEPRNPSLLALTLKTVVGGAFAALTGVSAGLILARWLAK-ALPSAQAAATAS 190

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            ++   AF A +  + +   L   P    G + + A+  I   ++LI PLA +L   +  
Sbjct: 191 ALTLPFAFTASVGALLAPAPLTCGPA-CAGVLFLPALAAIGMSAVLIAPLALRLRPFLPS 249

Query: 261 KYLTI---GFSMIMFTT 274
              +     F++ +  T
Sbjct: 250 APASRSLAVFAIALLCT 266


>gi|259907876|ref|YP_002648232.1| hypothetical protein EpC_12070 [Erwinia pyrifoliae Ep1/96]
 gi|224963498|emb|CAX54986.1| Putative permease [Erwinia pyrifoliae Ep1/96]
 gi|283477750|emb|CAY73666.1| Inner membrane protein yfcA [Erwinia pyrifoliae DSM 12163]
          Length = 265

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 95/237 (40%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +C++ + + L+G +  + G GGGL+ VP L  A         +    A+ T+       
Sbjct: 10  LLCVLFLVALLAGFIDSIAG-GGGLLTVPALLAA--------GLSPAQALATNKLQSVGG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + +   R   ++++  +  I +  + ++  +L++ HV    L +   +  + +G+  
Sbjct: 61  SFSASLYFIRRKAVDLREQRLNIVLTFVGSLAGALLVQHVQGGILRQLLPLLVIAIGLYF 120

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   R+  E   R+        + G   GF  G  G G G F  L  +   G ++ K+TA
Sbjct: 121 LLMPRIGEEDRQRRLHGLPFALVTGGCVGFYDGFFGPGAGSFYALAFVTLCGYNLAKSTA 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++       LL+ + SG             V     L++L   +    L  ++
Sbjct: 181 HAKVLNFTSNLGGLLLFMLSGK------------VVWLVGLVMLAGQVCGARLGARM 225


>gi|87120732|ref|ZP_01076625.1| hypothetical protein MED121_18365 [Marinomonas sp. MED121]
 gi|86163960|gb|EAQ65232.1| hypothetical protein MED121_18365 [Marinomonas sp. MED121]
          Length = 258

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 26/249 (10%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  +  D  +  I ++   +FL+G +  + G GGGLV VPVL       GI+      +A
Sbjct: 1   MDLIFFDFSLSTILILTFVAFLAGIIDSIAG-GGGLVTVPVLLF----SGIEP--AQALA 53

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
                G     S       RR   +++K L   I    I +V+ +++++++D S L KA 
Sbjct: 54  TNKLQGCAGTVSASYHFIKRRK--VDLKALLPAIITTAIGSVLGTILVAYLDSSLLLKAV 111

Query: 131 AIFCLLMGILMLKRDRLYC----ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
            I  +L+ I  L  ++L      + +F       I G   GF  G +G G G  FT   +
Sbjct: 112 PIILILVAIFFLFLNKLQPLISSKVQFSSFAFALIIGTSFGFYDGLIGPGTGAFFTTAYL 171

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
              G ++  ATA +  ++A     +L +  ++            G V  G  L +     
Sbjct: 172 CLTGMNLISATANTKVLNATSNLASLFIFSFT------------GHVLWGLGLCMAAGQW 219

Query: 246 LITPLATKL 254
           L   + ++L
Sbjct: 220 LGAQIGSRL 228


>gi|228915647|ref|ZP_04079234.1| hypothetical protein bthur0012_28660 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228934326|ref|ZP_04097165.1| hypothetical protein bthur0009_27850 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|229185280|ref|ZP_04312464.1| hypothetical protein bcere0004_28340 [Bacillus cereus BGSC 6E1]
 gi|228598200|gb|EEK55836.1| hypothetical protein bcere0004_28340 [Bacillus cereus BGSC 6E1]
 gi|228825494|gb|EEM71288.1| hypothetical protein bthur0009_27850 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228844065|gb|EEM89127.1| hypothetical protein bthur0012_28660 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 336

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 92/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A  
Sbjct: 30  TITGGFFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE- 87

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   V +  +S++    +    ++
Sbjct: 88  ------VVTTAASGASHLKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISL 141

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R     ++    K          G+  GF+    G G G  T  ++L  
Sbjct: 142 FLFTLGVYILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLAR 201

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       +A  A +    S GW            V+   V  ++   I+ 
Sbjct: 202 GNEARKVIGSVDTSEFPVALAATIGFFISLGWEQ----------VSWFWVFALMLGGIVA 251

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  ++    L +    ++  T+  
Sbjct: 252 APIAAWLVRIVPSHLLGVLVGGLIIFTNIR 281


>gi|47567968|ref|ZP_00238675.1| hypothetical protein membrane Spanning protein [Bacillus cereus
           G9241]
 gi|47555446|gb|EAL13790.1| hypothetical protein membrane Spanning protein [Bacillus cereus
           G9241]
          Length = 242

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 88/219 (40%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I           + + S M S +   
Sbjct: 26  IPIHVALATSLTAMAFTTLSGVISHHREGNVVLTIGGIVGGCGAFGSYIGSKMGSLIPSY 85

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERK-----------FPDNYVKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +   +  ++             +       G+VTG ++G+ 
Sbjct: 86  LLHWFTAGMLFLSAIFMCIKLIKFQNKEEVCLVKIKDISKENIMKCICLGLVTGMMAGSF 145

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 146 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 193

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 194 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK--FSMIM 230



 Score = 39.7 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 48/122 (39%), Gaps = 13/122 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I    ++G ++G FG+G    +   L            + +  ++GT++ VI P +
Sbjct: 128 IMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTMLVILPIA 180

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK------AFAIFCLL 136
           +   + +   G ++  +L   +    +   + +   ++  +  L         FA   LL
Sbjct: 181 IGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLKFSMIMTPVFAGCMLL 240

Query: 137 MG 138
           MG
Sbjct: 241 MG 242


>gi|229116581|ref|ZP_04245968.1| hypothetical protein bcere0017_28670 [Bacillus cereus Rock1-3]
 gi|228666891|gb|EEL22346.1| hypothetical protein bcere0017_28670 [Bacillus cereus Rock1-3]
          Length = 339

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 93/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A  
Sbjct: 33  IITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE- 90

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   V +  +S++    +    +I
Sbjct: 91  ------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISI 144

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R     ++   +K          G+  GF+    G G G  T  ++L  
Sbjct: 145 FLFTLGVYILLRFIIQKQIVTSKKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLAR 204

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       ++  A +    S GW            V+   V  ++   I+ 
Sbjct: 205 GNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALMLGGIVA 254

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  ++    L +    ++  T+  
Sbjct: 255 APIAAWLVRIVPPHLLGVLVGGLIIFTNIR 284


>gi|229918251|ref|YP_002886897.1| hypothetical protein EAT1b_2532 [Exiguobacterium sp. AT1b]
 gi|229469680|gb|ACQ71452.1| protein of unknown function DUF81 [Exiguobacterium sp. AT1b]
          Length = 259

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 100/261 (38%), Gaps = 18/261 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I  I +  F+   +SG+ G+GG ++  P+L     ++G   +   H   G S   +   
Sbjct: 5   FIITIFLIGFIGSFISGMVGIGGSIIKYPMLLYIPPILGF-AAFSAHEVSGISAIQVFFA 63

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++     +R+ G +N +++      + I + +     + + ++ +N  +A+   +  I+M
Sbjct: 64  TIGGIYAYRKGGYLNKQLILYMGVSVLIGSFIGGYGSTILSETMINVVYAVLATIATIMM 123

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG-----IFTNLLMLFYGASIYKAT 196
                   +          +    + F+ G      G     I   ++++        A 
Sbjct: 124 FLPKPQVDDMPLDQVQFNKVIAASSAFVVGIAAGIVGAAGAFILMPIMLVVLRIPTKMAI 183

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A+S  ++ + +  +   +I +              +  G  +I++  S++  P+   +  
Sbjct: 184 ASSLAITFISSIGSTFGKIITDQ------------IVWGPAVIMIIASLIAAPIGANVGK 231

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            +  K L    ++++  ++  
Sbjct: 232 NMNTKALQWILALLILASTIK 252



 Score = 35.8 bits (82), Expect = 7.2,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 30/90 (33%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                +M +   I   +A+ +SL +   +S+ S         I        I    I   
Sbjct: 165 FILMPIMLVVLRIPTKMAIASSLAITFISSIGSTFGKIITDQIVWGPAVIMIIASLIAAP 224

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + +  +++   L    A+  L   I + 
Sbjct: 225 IGANVGKNMNTKALQWILALLILASTIKIW 254


>gi|323473570|gb|ADX84176.1| conserved hypothetical protein [Sulfolobus islandicus REY15A]
 gi|323476217|gb|ADX81455.1| conserved hypothetical protein [Sulfolobus islandicus HVE10/4]
          Length = 293

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 99/273 (36%), Gaps = 31/273 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLM-GIDD-----SICMHVAMGTSLGV 77
            L I++  L G   GL G GG ++ +P+L     L  GI       S   H+ +GT+   
Sbjct: 17  VLSIISGILVGFSLGLIGGGGSILAIPLLLYFVGLANGIAPGTPEYSYITHLTLGTTALA 76

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +   + ++   H + G + +     +     I  ++ + +   +  + +   F    + +
Sbjct: 77  VGINAYINSYMHFKRGNVRVSEGIIFTIPGIIGDIIGAYLSHLMSGALILFLFGFLMIAV 136

Query: 138 GILMLKRDRLYCERKFPDNYVKYI------------WGMVTGFLSGALGVGGGIFTNLLM 185
            I M K      +    +N  K               G + GF SG  G+GGG      +
Sbjct: 137 AIRMWKSKCNPNKSILSNNSHKLTLRERIKIDKVLPAGFLVGFASGYFGIGGGFLVVPGL 196

Query: 186 LFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           LF  G  + +A  TS          A +                 G+V+I   L+ L   
Sbjct: 197 LFSTGLDMLRAVGTSLIAVGTFGVAAAITYAVY------------GYVDIVISLLYLVGG 244

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           +      + ++  + ++ L   F++I+   +  
Sbjct: 245 VAGGYAGSAIASRMPRQTLRKLFAIIIILVAIY 277



 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 7/122 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++ A FL G  SG FG+GGG ++VP L            + M  A+GTSL  +    V +
Sbjct: 170 VLPAGFLVGFASGYFGIGGGFLVVPGLLF-------STGLDMLRAVGTSLIAVGTFGVAA 222

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + +  +G +++ I   ++          S + S + +  L K FAI  +L+ I  +  +
Sbjct: 223 AITYAVYGYVDIVISLLYLVGGVAGGYAGSAIASRMPRQTLRKLFAIIIILVAIYTMYVN 282

Query: 146 RL 147
           R+
Sbjct: 283 RV 284


>gi|167034623|ref|YP_001669854.1| hypothetical protein PputGB1_3627 [Pseudomonas putida GB-1]
 gi|166861111|gb|ABY99518.1| protein of unknown function DUF81 [Pseudomonas putida GB-1]
          Length = 259

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 98/261 (37%), Gaps = 25/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++ + +F++G +  + G GGGL+  P L  A    G+      H+ +GT+       S
Sbjct: 12  LLILALVAFVAGFIDAIAG-GGGLLTTPALLTA----GMPP----HLVLGTNKLSSTFGS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + +    +    +  +F   I  ++ +++  ++   +LNK   +     GI +L
Sbjct: 63  ATAGFTYYKRKLFHPAQWRPALFATLIGALLGAVIAHYMPAEWLNKMLPVIVFACGIYLL 122

Query: 143 KRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATAT 198
                              +   G   GF  G  G G G F T   +L Y   + +A+  
Sbjct: 123 FGGTPKAPLDADAPIKKKWQVPQGFTLGFYDGVAGPGTGAFWTVSTLLLYPIDLVRASGV 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++ +    AL V I SG        + +G       L +    ++      + +   
Sbjct: 183 ARSMNFVSNIAALTVFIISGQ-----VDYIVG-------LCMGLSVMVGAFFGARTAISG 230

Query: 259 GKKYLTIGFSMIMFTTSFVFA 279
           G K++   F  ++   +   A
Sbjct: 231 GSKFIRPVFITVVLALTVRLA 251


>gi|75762059|ref|ZP_00741968.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74490449|gb|EAO53756.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 258

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         I + + S   S +   
Sbjct: 42  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 101

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +  ++ +++    Y                G+VTG ++G+ 
Sbjct: 102 LLHWFTAGMLFLSAIFMFIKLIMFQKKEQSSLYKHKEFSVKYLLKCVCLGLVTGMMAGSF 161

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 162 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 209

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 210 DYILLLQVLIGTMLGAYIGAKFTNYAPRTLLR--FSMIM 246



 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K+  V Y+   +    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 137 KEFSVKYLLKCVCLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 189

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  ++ L 
Sbjct: 190 LVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRTLLR 241


>gi|229523874|ref|ZP_04413279.1| hypothetical protein VCA_001453 [Vibrio cholerae bv. albensis
           VL426]
 gi|229337455|gb|EEO02472.1| hypothetical protein VCA_001453 [Vibrio cholerae bv. albensis
           VL426]
          Length = 258

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 93/264 (35%), Gaps = 28/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+       S
Sbjct: 9   IMVLALVAFIAGFIDAVAG-GGGMLTVPALLSL--------GLPPHLALGTNKLAATFAS 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R    +    K       I  ++ +L +  +   +L K   +  L   +  +
Sbjct: 60  STAAWTYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTV 119

Query: 143 KRDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
                  E+             + + G+  GF  G  G G G F T   M  Y  +I  A
Sbjct: 120 LHRPHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILLA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++    F +L+                LG ++    L +    +    +    +
Sbjct: 180 SGLAKAMNLTSNFTSLVTFAV------------LGHIDWLLGLTMGVCLMAGAYVGAHSA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G  ++   F +++   +   A
Sbjct: 228 IRFGAPFIRPLFILVVTILAGKLA 251


>gi|255532977|ref|YP_003093349.1| siroheme synthase [Pedobacter heparinus DSM 2366]
 gi|255345961|gb|ACU05287.1| siroheme synthase [Pedobacter heparinus DSM 2366]
          Length = 498

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 94/261 (36%), Gaps = 24/261 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
                ++  F+   + G  G+  G+      +     MG+  +     +MG  L  I   
Sbjct: 247 MFYWFLLGGFIFAMIDGAIGMSYGVTS----TSFSLAMGVPPASA---SMGVHLSEILSN 299

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD--KSFLNKAFAIFCLLMGI 139
            +     H R G +N K+ K  +    I  V  + ++S ++    +     +++ L++G 
Sbjct: 300 GIAG-WMHYRFGNVNWKLFKLLLIPGIIGAVTGAYLLSSLEHYSHYTKPIVSLYTLILGF 358

Query: 140 LMLKR---DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           ++L +          +        + G+  GF+    G G G      ++  G +   + 
Sbjct: 359 VILSKAYQANRKSAVRKNKIKKIGLLGLFGGFIDAVGGGGWGSIVLSSLIAGGRNARFSL 418

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T       IA  + L  I    G            +  AV  ++  S L +P+A K+S 
Sbjct: 419 GTVKITRFFIALMSSLTFITMLNGA-----------HWEAVAGLVIGSALASPIAAKVSN 467

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            I  K + +   +++   S  
Sbjct: 468 RISAKTIMVSVGILVVLVSLR 488


>gi|227829102|ref|YP_002830881.1| protein of unknown function DUF81 [Sulfolobus islandicus L.S.2.15]
 gi|229577902|ref|YP_002836300.1| protein of unknown function DUF81 [Sulfolobus islandicus Y.G.57.14]
 gi|229580803|ref|YP_002839202.1| protein of unknown function DUF81 [Sulfolobus islandicus Y.N.15.51]
 gi|284996488|ref|YP_003418255.1| protein of unknown function DUF81 [Sulfolobus islandicus L.D.8.5]
 gi|227455549|gb|ACP34236.1| protein of unknown function DUF81 [Sulfolobus islandicus L.S.2.15]
 gi|228008616|gb|ACP44378.1| protein of unknown function DUF81 [Sulfolobus islandicus Y.G.57.14]
 gi|228011519|gb|ACP47280.1| protein of unknown function DUF81 [Sulfolobus islandicus Y.N.15.51]
 gi|284444383|gb|ADB85885.1| protein of unknown function DUF81 [Sulfolobus islandicus L.D.8.5]
          Length = 293

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 99/273 (36%), Gaps = 31/273 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLM-GIDD-----SICMHVAMGTSLGV 77
            L I++  L G   GL G GG ++ +P+L     L  GI       S   H+ +GT+   
Sbjct: 17  VLSIISGILVGFSLGLIGGGGSILAIPLLLYFVGLANGIAPGTPEYSYITHLTLGTTALA 76

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +   + ++   H + G + +     +     I  ++ + +   +  + +   F    + +
Sbjct: 77  VGINAYINSYMHFKRGNVRVSEGIVFTIPGIIGDIIGAYLSHLMSGALILFLFGFLMIAV 136

Query: 138 GILMLKRDRLYCERKFPDNYVKYI------------WGMVTGFLSGALGVGGGIFTNLLM 185
            I M K      +    +N  K               G + GF SG  G+GGG      +
Sbjct: 137 AIRMWKSKCNPNKSILSNNSHKLTLRERIKIDKVLPAGFLVGFASGYFGIGGGFLVVPGL 196

Query: 186 LFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           LF  G  + +A  TS          A +                 G+V+I   L+ L   
Sbjct: 197 LFSTGLDMLRAVGTSLIAVGTFGVAAAITYAVY------------GYVDIVISLLYLVGG 244

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           +      + ++  + ++ L   F++I+   +  
Sbjct: 245 VAGGYAGSAIASRMPRQTLRKLFAIIIILVAIY 277



 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 7/122 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++ A FL G  SG FG+GGG ++VP L            + M  A+GTSL  +    V +
Sbjct: 170 VLPAGFLVGFASGYFGIGGGFLVVPGLLF-------STGLDMLRAVGTSLIAVGTFGVAA 222

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + +  +G +++ I   ++          S + S + +  L K FAI  +L+ I  +  +
Sbjct: 223 AITYAVYGYVDIVISLLYLVGGVAGGYAGSAIASRMPRQTLRKLFAIIIILVAIYTMYVN 282

Query: 146 RL 147
           R+
Sbjct: 283 RV 284


>gi|327400493|ref|YP_004341332.1| hypothetical protein Arcve_0596 [Archaeoglobus veneficus SNP6]
 gi|327316001|gb|AEA46617.1| protein of unknown function DUF81 [Archaeoglobus veneficus SNP6]
          Length = 258

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 88/244 (36%), Gaps = 29/244 (11%)

Query: 45  GLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWI 104
            ++M+P L+  F          +  A+GT++  +  T+    + H +   ++    +   
Sbjct: 25  CVIMLPALTFLF-------DYPLPFAIGTTITAVIITASSGAIGHIKMRNVDFSTARVVA 77

Query: 105 FVLPITTVVTSLMISHVDKS--FLNKAFAIFCLLMGILML------KRDRLYCERKFPDN 156
                   V S+M  ++      LN       L + I M+      ++      ++ P +
Sbjct: 78  TTGAAGAAVGSIMFFYIANRLWLLNFVLGFAFLYVSIRMIYEGLFRRKMGAMDGKEVPGS 137

Query: 157 -YVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
              K + G   G ++G +G+GGG       +   G+ I  A  TS      +A  +   +
Sbjct: 138 AAAKGVIGFCIGVITGIVGLGGGYALVPSFIYLLGSPIKIAVGTSLASFISMAVVSGAFK 197

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +Y             GFV+I A + +   +     +  +L+  +    +   F  +    
Sbjct: 198 LYQ------------GFVDIVAAVCLGVGTAAGAQIGARLTKAVPPWVIKAIFGFVFLYV 245

Query: 275 SFVF 278
           S  F
Sbjct: 246 SLKF 249



 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 44/132 (33%), Gaps = 7/132 (5%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  +    V        V  F  G ++G+ G+GGG  +VP                + +A
Sbjct: 126 MGAMDGKEVPGSAAAKGVIGFCIGVITGIVGLGGGYALVPSFIYLL-------GSPIKIA 178

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GTSL      +V+S       G +++               + + +   V    +   F
Sbjct: 179 VGTSLASFISMAVVSGAFKLYQGFVDIVAAVCLGVGTAAGAQIGARLTKAVPPWVIKAIF 238

Query: 131 AIFCLLMGILML 142
               L + +  +
Sbjct: 239 GFVFLYVSLKFV 250


>gi|124028506|ref|YP_001013826.1| hypothetical protein Hbut_1668 [Hyperthermus butylicus DSM 5456]
 gi|123979200|gb|ABM81481.1| universally conserved protein [Hyperthermus butylicus DSM 5456]
          Length = 255

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 15/203 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + +   ++G +  L G+GGG +MVP L            + + VA   SL  I  TS
Sbjct: 5   VLAVPLVGVVAGFVGTLLGIGGGAIMVPALVLL--------GVPVKVAAPASLVAILGTS 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +       R G +++ +         +  +V  + +  + + FL     I  ++ G L+L
Sbjct: 57  LGGIRRLFRRGLVDVMLAVFLETASGLGALVGVIAVGRLTEGFLRGLLGIVLIVSGFLLL 116

Query: 143 KRDRLYCE------RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKA 195
              R          R        +I  ++ GF S  LG+GGG+F   +++F  G  +  A
Sbjct: 117 TTRRKLSSTIEAYRRSIVRLIASWIVALMAGFASATLGIGGGVFKVPVLVFILGLGLKHA 176

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
            ATS  +  + A   ++    +G
Sbjct: 177 VATSKLMVGITAAVGVIGHFIAG 199



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 47/115 (40%), Gaps = 7/115 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + + ++G  S   G+GGG+  VPVL            + +  A+ TS  ++  T+ +  +
Sbjct: 141 IVALMAGFASATLGIGGGVFKVPVLVFIL-------GLGLKHAVATSKLMVGITAAVGVI 193

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            H   G ++  +    +        + S ++  +    L      + + MG+ ML
Sbjct: 194 GHFIAGRVDFLLALPLLAGTYTGASIGSRILVKLRVKTLQGIAVAYHIAMGLYML 248


>gi|227826493|ref|YP_002828272.1| hypothetical protein M1425_0082 [Sulfolobus islandicus M.14.25]
 gi|229583655|ref|YP_002842156.1| hypothetical protein M1627_0082 [Sulfolobus islandicus M.16.27]
 gi|238618561|ref|YP_002913386.1| protein of unknown function DUF81 [Sulfolobus islandicus M.16.4]
 gi|227458288|gb|ACP36974.1| protein of unknown function DUF81 [Sulfolobus islandicus M.14.25]
 gi|228018704|gb|ACP54111.1| protein of unknown function DUF81 [Sulfolobus islandicus M.16.27]
 gi|238379630|gb|ACR40718.1| protein of unknown function DUF81 [Sulfolobus islandicus M.16.4]
          Length = 293

 Score = 75.5 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 99/273 (36%), Gaps = 31/273 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLM-GIDD-----SICMHVAMGTSLGV 77
            L I++  L G   GL G GG ++ +P+L     L  GI       S   H+ +GT+   
Sbjct: 17  VLSIISGILVGFSLGLIGGGGSILAIPLLLYFVGLANGIAPGTPEYSYITHLTLGTTALA 76

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +   + ++   H + G + +     +     I  ++ + +   +  + +   F    + +
Sbjct: 77  VGINAYINSYMHFKRGNVRVSEGIVFTIPGIIGDIIGAYLSHLMSGALILFLFGFLMIAV 136

Query: 138 GILMLKRDRLYCERKFPDNYVKYI------------WGMVTGFLSGALGVGGGIFTNLLM 185
            I M K      +    +N  K               G + GF SG  G+GGG      +
Sbjct: 137 AIRMWKSKCNPNKSILSNNSHKLTLRERIKIDKVIPAGFLVGFASGYFGIGGGFLVVPGL 196

Query: 186 LFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           LF  G  + +A  TS          A +                 G+V+I   L+ L   
Sbjct: 197 LFSTGLDMLRAVGTSLIAVGTFGVAAAITYAVY------------GYVDIVISLLYLVGG 244

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           +      + ++  + ++ L   F++I+   +  
Sbjct: 245 VAGGYAGSAIASRMPRQTLRKLFAIIIILVAIY 277



 Score = 59.3 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 7/122 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I A FL G  SG FG+GGG ++VP L            + M  A+GTSL  +    V +
Sbjct: 170 VIPAGFLVGFASGYFGIGGGFLVVPGLLF-------STGLDMLRAVGTSLIAVGTFGVAA 222

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + +  +G +++ I   ++          S + S + +  L K FAI  +L+ I  +  +
Sbjct: 223 AITYAVYGYVDIVISLLYLVGGVAGGYAGSAIASRMPRQTLRKLFAIIIILVAIYTMYVN 282

Query: 146 RL 147
           R+
Sbjct: 283 RV 284


>gi|118478380|ref|YP_895531.1| hypothetical protein BALH_2745 [Bacillus thuringiensis str. Al
           Hakam]
 gi|118417605|gb|ABK86024.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 342

 Score = 75.5 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 92/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A  
Sbjct: 36  TITGGFFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE- 93

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   V +  +S++    +    ++
Sbjct: 94  ------VVTTAASGASHLKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISL 147

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R     ++    K          G+  GF+    G G G  T  ++L  
Sbjct: 148 FLFTLGVYILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLAR 207

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       +A  A +    S GW            V+   V  ++   I+ 
Sbjct: 208 GNEARKVIGSVDTSEFPVALAATIGFFISLGWEQ----------VSWFWVFALMLGGIVA 257

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  ++    L +    ++  T+  
Sbjct: 258 APIAAWLVRIVPSHLLGVLVGGLIIFTNIR 287


>gi|149182200|ref|ZP_01860681.1| hypothetical protein BSG1_00075 [Bacillus sp. SG-1]
 gi|148850059|gb|EDL64228.1| hypothetical protein BSG1_00075 [Bacillus sp. SG-1]
          Length = 258

 Score = 75.5 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 106/263 (40%), Gaps = 18/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +I +I +  F+   +SG+ G+GG ++  P+L     L G+  +   H   G S   + 
Sbjct: 3   IGFIIVIFLIGFIGSYISGMLGIGGSIIKYPMLLYIPPLFGL-AAFSAHEVSGISAVQVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++     +R+ G +N  ++      + I + +       + +  +N  + I  L+  I
Sbjct: 62  FATIGGVWAYRKGGYLNKTLIAYMGGAILIGSFIGGYGSKLMSEGGINLVYGILALIAAI 121

Query: 140 LMLKRDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYK 194
           +M    +    +  ++   + ++     ++ G  +G +G  G      +ML         
Sbjct: 122 MMFIPKKGIDDIPLDQVTFNKWLAASLALIVGIGAGIVGAAGAFLLVPIMLVVLKIPTRM 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             A+S  ++ + +  A + +I +G               + A++ ++  S++ +PL    
Sbjct: 182 TIASSLAITFISSIGATVGKITTGQVE-----------YMPALV-MVVASLIASPLGAMA 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K L    ++++  T+  
Sbjct: 230 GKKVNTKILQYILAVLILGTAIK 252


>gi|229046760|ref|ZP_04192403.1| hypothetical protein bcere0027_27790 [Bacillus cereus AH676]
 gi|229128389|ref|ZP_04257370.1| hypothetical protein bcere0015_28340 [Bacillus cereus BDRD-Cer4]
 gi|229145660|ref|ZP_04274043.1| hypothetical protein bcere0012_28120 [Bacillus cereus BDRD-ST24]
 gi|229151259|ref|ZP_04279465.1| hypothetical protein bcere0011_28060 [Bacillus cereus m1550]
 gi|228632259|gb|EEK88882.1| hypothetical protein bcere0011_28060 [Bacillus cereus m1550]
 gi|228637906|gb|EEK94353.1| hypothetical protein bcere0012_28120 [Bacillus cereus BDRD-ST24]
 gi|228655248|gb|EEL11105.1| hypothetical protein bcere0015_28340 [Bacillus cereus BDRD-Cer4]
 gi|228724578|gb|EEL75892.1| hypothetical protein bcere0027_27790 [Bacillus cereus AH676]
          Length = 336

 Score = 75.5 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
             S    ++    +  + +  +  F +  + G  G+  G+     L   F +     S  
Sbjct: 24  KVSFSFIITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASAS 82

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +H+A          T+  S   H + G ++   +        I   V +  +S++    +
Sbjct: 83  VHLAE-------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVI 135

Query: 127 NKAFAIFCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
               ++F   +G+ +L R     ++    K          G+  GF+    G G G  T 
Sbjct: 136 KPYISVFLFTLGVYILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITT 195

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIIL 241
            ++L  G    K   +       ++  A +    S GW            V+   V  ++
Sbjct: 196 PVLLARGNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFSLM 245

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              I+  P+A  L  ++    L +    ++  T+  
Sbjct: 246 LGGIVAAPIAAWLVRIVPSHLLGVLVGGLIIFTNIR 281


>gi|149183879|ref|ZP_01862271.1| hypothetical protein BSG1_21490 [Bacillus sp. SG-1]
 gi|148848417|gb|EDL62675.1| hypothetical protein BSG1_21490 [Bacillus sp. SG-1]
          Length = 258

 Score = 75.5 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 106/263 (40%), Gaps = 18/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +I +I +  F+   +SG+ G+GG ++  P+L     L G+  +   H   G S   + 
Sbjct: 3   IGFIIVIFLIGFIGSYISGMLGIGGSIIKYPMLLYIPPLFGL-AAFSAHEVSGISAVQVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++     +R+ G +N  ++      + I + +       + +  +N  + +  L+  +
Sbjct: 62  FATIGGVWAYRKGGYLNKTLIAYMGGAILIGSFIGGYGSKLMSEGGINLVYGVLALIAAV 121

Query: 140 LMLKRDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYK 194
           +M    +    +  ++   + ++     ++ G  +G +G  G      +ML         
Sbjct: 122 MMFIPKKGIDDIPLDQVTFNKWLAASLALIVGIGAGIVGAAGAFLLVPIMLVVLKIPTRM 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             A+S  ++ + +  A + +I +G               + A++ ++  S++ +PL    
Sbjct: 182 TIASSLAITFISSIGATVGKITTGQVE-----------YMPALV-MVVASLIASPLGAMA 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K L    ++++  T+  
Sbjct: 230 GKKVNTKILQYILAVLILGTAIK 252


>gi|269967646|ref|ZP_06181696.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269827733|gb|EEZ82017.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 261

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 95/267 (35%), Gaps = 29/267 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+      
Sbjct: 7   TMLLVLALVAFVAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + +      +  +       +   + +L +  +   +L K   +  L   + 
Sbjct: 58  ASSTAAFTYYKKRLFKPQCWRRAFVATLVGATLGTLFVDAISTDWLEKGLPLVILAAALY 117

Query: 141 MLKRDRLYCERKFPDN-------YVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASI 192
            +     +   + P           +Y+ G+  GF  G  G G G F T   M  Y  +I
Sbjct: 118 TVFHKTPHSAHQSPIPEPCPKLHKKQYMQGLSIGFYDGLAGPGTGAFWTVSSMALYRLNI 177

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A+  +  ++    F +L+   +            LG +N    L +    +    +  
Sbjct: 178 LLASGLAKAMNFTSNFTSLITFAF------------LGHINWVLGLTMGVCLMAGAFVGA 225

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             +   G K++   F  ++   +   A
Sbjct: 226 HSAIRFGSKFIRPVFVTVVSILAIKLA 252


>gi|238753802|ref|ZP_04615163.1| Inner membrane protein yfcA [Yersinia ruckeri ATCC 29473]
 gi|238708038|gb|EEQ00395.1| Inner membrane protein yfcA [Yersinia ruckeri ATCC 29473]
          Length = 209

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 85/201 (42%), Gaps = 13/201 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + I ++ + + L+G +  + G GGGL+ +P L       G+  +     A+ T+      
Sbjct: 9   EVIGVLFLVALLAGFIDSIAG-GGGLLTIPALLAV----GVPPTQ----ALATNKLQSVG 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R G +N+K  K  I +  + +++ ++++ H+    L +   I  + +G+ 
Sbjct: 60  GSFSASLYFVRRGAVNLKEQKLTIALTLVGSMLGAILVQHLQADILRQILPILVIGIGVY 119

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L   +L     +R+        I G   GF  G  G G G F  L  +   G ++ K+T
Sbjct: 120 FLLTPKLGERDQQRRLSALPFALIAGGGIGFYDGFFGPGAGSFYALAFVTLCGFNLAKST 179

Query: 197 ATSAGVSALIAFPALLVRIYS 217
           A +  ++       L   I  
Sbjct: 180 AHAKVLNFTSNLGGLTFFILG 200


>gi|148547045|ref|YP_001267147.1| hypothetical protein Pput_1810 [Pseudomonas putida F1]
 gi|148511103|gb|ABQ77963.1| protein of unknown function DUF81 [Pseudomonas putida F1]
          Length = 259

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 97/261 (37%), Gaps = 25/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++ + +F++G +  + G GGGL+  P L  A    G+      H+ +GT+       S
Sbjct: 12  LLILALVAFVAGFIDAIAG-GGGLLTTPALLTA----GMPP----HLVLGTNKLSSTFGS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + +    +    +  +F      ++ +++  ++   +LNK   +     GI +L
Sbjct: 63  ATASFTYYKRKLFHPAQWRPALFATLTGALLGAVIAHYMPAEWLNKMLPVIVFACGIYLL 122

Query: 143 KRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATAT 198
                              +   G   GF  G  G G G F T   +L Y   + +A+  
Sbjct: 123 FGGTPKAPLDADAPIKKKWQVPQGFTLGFYDGVAGPGTGAFWTVSTLLLYPIDLVRASGV 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++ +    AL V I SG        + +G       L +    ++      + +   
Sbjct: 183 ARSMNFVSNIAALTVFIISGQ-----VDYIVG-------LCMGLSVMVGAFFGARTAISG 230

Query: 259 GKKYLTIGFSMIMFTTSFVFA 279
           G K++   F  ++   +   A
Sbjct: 231 GSKFIRPVFITVVLALTVRLA 251


>gi|260779116|ref|ZP_05888008.1| hypothetical protein VIC_004525 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605280|gb|EEX31575.1| hypothetical protein VIC_004525 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 259

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 49/266 (18%), Positives = 94/266 (35%), Gaps = 28/266 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+      
Sbjct: 7   TMLLVLALVAFVAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + +                 I   + +L++  +   +L K   I  LL  I 
Sbjct: 58  ASSTAAFTYYKKRLFKPHCWGRAFIATLIGATLGTLVVDLISTEWLEKILPIIILLAAIY 117

Query: 141 -MLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIY 193
            +  +       + P      N  +YI G   GF  G  G G G F T   M  Y  +I 
Sbjct: 118 TIWHKTPQSNSNEMPQPCPKFNKKQYIQGFSIGFYDGVAGPGTGAFWTVSSMALYRLNIL 177

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+  S  ++    F +L+                LG ++    L +    +    +   
Sbjct: 178 LASGLSKAMNFTSNFTSLITFAI------------LGHIDWVLGLTMGVCLMAGAFVGAH 225

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +   G K++   F  ++   +   A
Sbjct: 226 SAIRFGAKFIRPVFVTVVSILAVKLA 251


>gi|229110515|ref|ZP_04240085.1| hypothetical protein bcere0018_27680 [Bacillus cereus Rock1-15]
 gi|228672999|gb|EEL28273.1| hypothetical protein bcere0018_27680 [Bacillus cereus Rock1-15]
          Length = 336

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
             S    ++    +  + +  +  F +  + G  G+  G+     L   F +     S  
Sbjct: 24  KVSFSFIITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASAS 82

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +H+A          T+  S   H + G ++   +        I   V +  +S++    +
Sbjct: 83  VHLAE-------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVI 135

Query: 127 NKAFAIFCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
               ++F   +G+ +L R     ++    K          G+  GF+    G G G  T 
Sbjct: 136 KPYISVFLFTLGVYILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITT 195

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIIL 241
            ++L  G    K   +       ++  A +    S GW            V+   V  ++
Sbjct: 196 PVLLARGNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWIWVFSLM 245

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              I+  P+A  L  ++    L +    ++  T+  
Sbjct: 246 LGGIVAAPIAAWLVRIVPSHLLGVLVGGLIIFTNIR 281


>gi|297579375|ref|ZP_06941303.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297536969|gb|EFH75802.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 259

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 93/264 (35%), Gaps = 28/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+       S
Sbjct: 10  IMVLALVAFIAGFIDAVAG-GGGMLTVPALLSL--------GLPPHLALGTNKLAATFAS 60

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R    +    K       I  ++ +L +  +   +L K   +  L   +  +
Sbjct: 61  STAAWTYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTV 120

Query: 143 KRDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
                  E+             + + G+  GF  G  G G G F T   M  Y  +I  A
Sbjct: 121 LHRPHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILLA 180

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++    F +L+                LG ++    L +    +    +    +
Sbjct: 181 SGLAKAMNLTSNFTSLVTFAV------------LGHIDWLLGLTMGICLMAGAYVGAHSA 228

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G  ++   F +++   +   A
Sbjct: 229 IRFGAPFIRPLFILVVTILAGKLA 252


>gi|229508047|ref|ZP_04397552.1| hypothetical protein VCF_003281 [Vibrio cholerae BX 330286]
 gi|229511714|ref|ZP_04401193.1| hypothetical protein VCE_003123 [Vibrio cholerae B33]
 gi|229515236|ref|ZP_04404696.1| hypothetical protein VCB_002893 [Vibrio cholerae TMA 21]
 gi|229518852|ref|ZP_04408295.1| hypothetical protein VCC_002879 [Vibrio cholerae RC9]
 gi|229607608|ref|YP_002878256.1| hypothetical protein VCD_002520 [Vibrio cholerae MJ-1236]
 gi|254848942|ref|ZP_05238292.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255745384|ref|ZP_05419333.1| hypothetical protein VCH_001732 [Vibrio cholera CIRS 101]
 gi|262167413|ref|ZP_06035120.1| hypothetical protein VIJ_000577 [Vibrio cholerae RC27]
 gi|229343541|gb|EEO08516.1| hypothetical protein VCC_002879 [Vibrio cholerae RC9]
 gi|229347941|gb|EEO12900.1| hypothetical protein VCB_002893 [Vibrio cholerae TMA 21]
 gi|229351679|gb|EEO16620.1| hypothetical protein VCE_003123 [Vibrio cholerae B33]
 gi|229355552|gb|EEO20473.1| hypothetical protein VCF_003281 [Vibrio cholerae BX 330286]
 gi|229370263|gb|ACQ60686.1| hypothetical protein VCD_002520 [Vibrio cholerae MJ-1236]
 gi|254844647|gb|EET23061.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255737214|gb|EET92610.1| hypothetical protein VCH_001732 [Vibrio cholera CIRS 101]
 gi|262024110|gb|EEY42804.1| hypothetical protein VIJ_000577 [Vibrio cholerae RC27]
          Length = 258

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 93/264 (35%), Gaps = 28/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+       S
Sbjct: 9   IMVLALVAFIAGFIDAVAG-GGGMLTVPALLSL--------GLPPHLALGTNKLAATFAS 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R    +    K       I  ++ +L +  +   +L K   +  L   +  +
Sbjct: 60  STAAWTYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTV 119

Query: 143 KRDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
                  E+             + + G+  GF  G  G G G F T   M  Y  +I  A
Sbjct: 120 LHRPHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILLA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++    F +L+                LG ++    L +    +    +    +
Sbjct: 180 SGLAKAMNLTSNFTSLVTFAL------------LGHIDWLLGLTMGVCLMAGAYVGAHSA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G  ++   F +++   +   A
Sbjct: 228 IRFGAPFIRPLFILVVTILAGKLA 251


>gi|309390296|gb|ADO78176.1| protein of unknown function DUF81 [Halanaerobium praevalens DSM
           2228]
          Length = 255

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 82/214 (38%), Gaps = 19/214 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  II A + +G ++GL G    +++ P+L               + A+G SL      S
Sbjct: 4   LLTIIFAGWGAGIVTGLVGASAVVIVTPILVNFL-------GYSPYTAIGISLATDVIAS 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +S   + +HG  ++K          I  +V S +   +  S L  +  I  L +GI  L
Sbjct: 57  SISAYTYHKHGNTDIKNGIYMTIAAVIAALVGSKLSGQMSDSILGGSTNIVILFLGISFL 116

Query: 143 KRDRLYCERKFPDN-----------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGA 190
           ++        F +            +    +G + G + G +G GGG+   L++ F  G 
Sbjct: 117 RKPIHQRIEDFKEKFDLSFWKKRKLFSSLFFGSLIGLMCGIVGAGGGMIILLILTFVLGY 176

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
           S++ A  TS  +    A    +        +  L
Sbjct: 177 SVHIAIGTSVIIMTFTALSGSIGHFIVEASVPYL 210


>gi|51892120|ref|YP_074811.1| hypothetical protein STH982 [Symbiobacterium thermophilum IAM
           14863]
 gi|51855809|dbj|BAD39967.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 279

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 56/289 (19%), Positives = 95/289 (32%), Gaps = 48/289 (16%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V     I++ S L+G +  + G+GGG+++VP L+  F             A+  S   I 
Sbjct: 4   VALTLAILLTSVLAGLVGSMLGLGGGIIIVPALTLFF-------GYDFRTAVAASAVAII 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  + + + R    N +I         +  +  + +  +V   FL   FA        
Sbjct: 57  ATSTGAAVAYLRDHITNTRIAMFLEIGSTLGALSGAFIAGYVPARFLFLLFAALMAYSAF 116

Query: 140 LMLKRDRLYCER-----------KFPDNYVKYIWGMVT-----------------GFLSG 171
            M +  +                +    Y     G                    G  +G
Sbjct: 117 SMFRARKSELREDVVPDRLSERLQLRGAYYDKALGRTISYRATGALPGLLLMYVSGAFAG 176

Query: 172 ALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
            LGVGGG F    M +     I  +TATS  +  + A  +  V    G     + P   G
Sbjct: 177 LLGVGGGTFKVPAMDIVMKLPIKVSTATSNFMIGVTAAASAAVYFVRG----DVQPLVAG 232

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            V +G +            L ++L   +    L + F  ++   +   A
Sbjct: 233 PVALGVLCG--------ALLGSRLMVRMKGSTLRLLFVPLLVYVAVQMA 273


>gi|229103684|ref|ZP_04234365.1| hypothetical protein bcere0019_28340 [Bacillus cereus Rock3-28]
 gi|228679806|gb|EEL34002.1| hypothetical protein bcere0019_28340 [Bacillus cereus Rock3-28]
          Length = 339

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 93/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A  
Sbjct: 33  IITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE- 90

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   V +  +S++    +    +I
Sbjct: 91  ------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISI 144

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R     ++   +K          G+  GF+    G G G  T  ++L  
Sbjct: 145 FLFTLGVYILLRFIIQKQIVTSKKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLAR 204

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       ++  A +    S GW            V+   V  ++   I+ 
Sbjct: 205 GNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALMLGGIVA 254

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  ++    L +    ++  T+  
Sbjct: 255 APIAAWLVRIVPPHLLGVLVGGLIIFTNIR 284


>gi|300717706|ref|YP_003742509.1| permease [Erwinia billingiae Eb661]
 gi|299063542|emb|CAX60662.1| Putative permease [Erwinia billingiae Eb661]
          Length = 267

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 96/237 (40%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++ L+   + L+G +  + G GGGL+ VP L        +   +    A+ T+       
Sbjct: 10  FVGLLFFVAMLAGFIDSIAG-GGGLLTVPAL--------MSVGLSPAQAIATNKLQSVGG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + +   R G +N++  +  I +  +  V  +++I H+    L +   I  + +G+  
Sbjct: 61  SFSASLYFVRRGAVNLREQRLNIGMTFLGAVTGAILIQHLQAELLRQVLPILLIAIGLYF 120

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   ++  E   R+        + G   GF  G  G G G F  L  +   G ++ K+TA
Sbjct: 121 LLLPKIGEEDRQRRLHGLPFALVAGGCVGFYDGFFGPGAGSFYALAFVTLCGYNLAKSTA 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++    F  LL  ++ G             V  G  L++L  +I    L  ++
Sbjct: 181 HAKVLNFTSNFGGLLFFMFGGK------------VVWGTGLVMLVGAICGARLGARM 225


>gi|118478909|ref|YP_896060.1| permease [Bacillus thuringiensis str. Al Hakam]
 gi|118418134|gb|ABK86553.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 272

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 86/219 (39%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA  TSL  +A T++   + H R G + + I           + + S + S +   
Sbjct: 56  IPIHVAFATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSFIPPY 115

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERK-----------FPDNYVKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +   +   +             +       G+VTG ++G+ 
Sbjct: 116 LLHWFTAGMLFLSAIFMCIKLIKFQNEEEVCLVKIKDISKENIMKCICLGLVTGMMAGSF 175

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 176 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 223

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 224 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK--FSMIM 260



 Score = 39.7 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I    ++G ++G FG+G    +   L            + +  ++GT++ VI P +
Sbjct: 158 IMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTMLVILPIA 210

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           +   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 211 IGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK 255


>gi|325106350|ref|YP_004276004.1| protein of unknown function DUF81 [Pedobacter saltans DSM 12145]
 gi|324975198|gb|ADY54182.1| protein of unknown function DUF81 [Pedobacter saltans DSM 12145]
          Length = 265

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 89/247 (36%), Gaps = 36/247 (14%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L    ++  +        A G SL ++  TS++  + + +   +++K+   +     
Sbjct: 30  VPILVYIAKIEPVS-------ATGYSLFIVGVTSLIGMLSYFKEKLVDIKLAVLFAVPSM 82

Query: 109 ITTVVT-SLMISHVDKSFLNK-------------AFAIFCLLMGILMLKRDRLYCERKF- 153
           I+  +    +I ++  + L+               FA+  +L  I M+            
Sbjct: 83  ISVWLVRHFVIHNLPDTILSIGGWSLSKDTAIMFFFAVVMILSSIKMMFFKEQTQGHIQY 142

Query: 154 --PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPA 210
             P+     I G++ G LSG +G GGG      +  + G  ++ A  TS  + AL +   
Sbjct: 143 IDPNFKAAVIGGIIVGVLSGLIGAGGGFLIVPAITLFMGVPVHLAVGTSLLIIALNSLVG 202

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
                      + L       +N   +L     S +   +   L   +  K L   F+  
Sbjct: 203 FTG------DFSHLSE-----INWSYLLEFSLFSSVGVLVGVYLGKKLNPKRLKSVFAWF 251

Query: 271 MFTTSFV 277
           +   + V
Sbjct: 252 VMAVAVV 258



 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 8/119 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G LSGL G GGG ++VP ++           + +H+A+GTSL +IA  S++ F
Sbjct: 151 VIGGIIVGVLSGLIGAGGGFLIVPAITLFM-------GVPVHLAVGTSLLIIALNSLVGF 203

Query: 87  MEHRRH-GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                H   IN   L ++     +  +V   +   ++   L   FA F + + ++++  
Sbjct: 204 TGDFSHLSEINWSYLLEFSLFSSVGVLVGVYLGKKLNPKRLKSVFAWFVMAVAVVIMFD 262


>gi|228986146|ref|ZP_04146289.1| hypothetical protein bthur0001_28340 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228773661|gb|EEM22084.1| hypothetical protein bthur0001_28340 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 336

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 93/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A  
Sbjct: 30  TITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE- 87

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   + +  +S++    +    ++
Sbjct: 88  ------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFIGACFLSNLPGDVIKPYISV 141

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R     ++   +K          G+  GF+    G G G  T  ++L  
Sbjct: 142 FLFTLGVYILLRFIIQKQVVTSKKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLAR 201

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       ++  A +    S GW            V+   V  ++   I+ 
Sbjct: 202 GNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFSLMLGGIVA 251

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  ++    L +    ++  T+  
Sbjct: 252 APIAAWLVRIVPSHLLGVLVGGLIIFTNIR 281


>gi|254286785|ref|ZP_04961739.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150423212|gb|EDN15159.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 259

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 93/264 (35%), Gaps = 28/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+       S
Sbjct: 10  IMVLALVAFIAGFIDAVAG-GGGMLTVPALLSL--------GLPPHLALGTNKLAATFAS 60

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R    +    K       I  ++ +L +  +   +L K   +  L   +  +
Sbjct: 61  STAAWTYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTV 120

Query: 143 KRDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
                  E+             + + G+  GF  G  G G G F T   M  Y  +I  A
Sbjct: 121 LHRPHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILLA 180

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++    F +L+                LG ++    L +    +    +    +
Sbjct: 181 SGLAKAMNLTSNFTSLVTFAV------------LGHIDWLLGLTMGVCLMAGAYVGAHSA 228

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G  ++   F +++   +   A
Sbjct: 229 IRFGAPFIRPLFILVVTILAGKLA 252


>gi|159045387|ref|YP_001534181.1| hypothetical protein Dshi_2847 [Dinoroseobacter shibae DFL 12]
 gi|157913147|gb|ABV94580.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
          Length = 306

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 95/279 (34%), Gaps = 55/279 (19%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG +M P+L       GI  +    VA+ T    I  +S    + H R  T++
Sbjct: 28  SGMFGVGGGFLMTPLLFFI----GIPPA----VAVATEANQIVASSFSGVLAHLRRRTVD 79

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGILML--------- 142
           +++    +        +  ++ +++         +   + +F  ++G LM          
Sbjct: 80  LRMGTVLLVGGLFGAGIGVILFNYLKALGQVDLLVKLCYVVFLGVVGALMFVESLNAIRK 139

Query: 143 ---------------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
                                 + R      +       I G   G L+  +GVGGG   
Sbjct: 140 SRKSGGAPPARRQRNWVHALPFKMRFRTSGLYISVIPPLIVGFAVGVLAAIMGVGGGFIM 199

Query: 182 NLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
              M++  G        TS      +     L+   + + ++ +             +++
Sbjct: 200 VPAMIYILGMPTKVVVGTSLFQIIFVTAFTTLLHATTNFTVDMMLA-----------VLL 248

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           L   ++   + T L   +  + L I  ++I+       A
Sbjct: 249 LIGGVVGAQIGTALGTKLKAEQLRILLAIIVLAVCGKLA 287


>gi|52141866|ref|YP_084963.1| permease [Bacillus cereus E33L]
 gi|51975335|gb|AAU16885.1| permease [Bacillus cereus E33L]
          Length = 245

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I           + + S + S +   
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSLIPPY 88

Query: 125 FLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYI----------WGMVTGFLSGAL 173
            L+   A    L  I M +K  +   E++     +K I           G+VTG ++G+ 
Sbjct: 89  LLHWFTAGMLFLSAIFMCIKLIKFQNEKEVRLVKIKDISKENIMKCICLGLVTGMMAGSF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 149 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 196

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 197 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK--FSMIM 233



 Score = 39.3 bits (91), Expect = 0.69,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I    ++G ++G FG+G    +   L            + +  ++GT++ VI P +
Sbjct: 131 IMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTMLVILPIA 183

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           +   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 184 IGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK 228


>gi|294141745|ref|YP_003557723.1| hypothetical protein SVI_2974 [Shewanella violacea DSS12]
 gi|293328214|dbj|BAJ02945.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 257

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 95/263 (36%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++     L+G +  + G GGGL+ +P L            I  H A+GT+       S 
Sbjct: 11  AILAGIGLLAGFIDAIAG-GGGLLSIPALLTL--------GINPHTALGTNKLAACFGSS 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   + +      ++         +  +  + +++ +D   L K   +  +++ I  L 
Sbjct: 62  TAAYTYYKQNLFTPQLWYHTFIATFLGAISGTFIVTLIDSHLLEKLLPLMIIIIAIYTLA 121

Query: 144 RDR------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
           +            ++      +++ G   GF  G  G G G F T     ++   +  + 
Sbjct: 122 KPNSMGCSTFTPLKQPATRIKQWLQGFPLGFYDGFAGPGTGAFWTITSTTYHKQPLLHSC 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++      +L++ +            +LG VN+   L +    +L + +  + + 
Sbjct: 182 GLARAMTFTSNLTSLVIFL------------TLGQVNVIIGLSMGLCMMLGSFIGARTAI 229

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G +++   F  ++   +   A
Sbjct: 230 KFGVQFIRPVFITLVLLIAAKLA 252


>gi|126740488|ref|ZP_01756175.1| membrane protein [Roseobacter sp. SK209-2-6]
 gi|126718289|gb|EBA15004.1| membrane protein [Roseobacter sp. SK209-2-6]
          Length = 306

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 97/277 (35%), Gaps = 55/277 (19%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG +M P+L       GI  +    VA+ T    I  +S    + H R  T++
Sbjct: 28  SGMFGVGGGFLMTPLLFFI----GIPPT----VAVATEANQIVASSFSGVLAHFRRRTVD 79

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGILML--------- 142
           +K+         I   +  ++ +++         +   + +F  ++G LM          
Sbjct: 80  IKMGVVLQIGGVIGAALGVVVFNYLKSLGQVDLLVKLCYVVFLGVVGGLMFIESLNAMRK 139

Query: 143 ---------------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
                                 + R      +       + G+  G L+  +GVGGG   
Sbjct: 140 SKRSGGATPVRRQRGWVHVLPFKMRFRTSGLYISVIPPILVGVCVGILAAIMGVGGGFIM 199

Query: 182 NLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
              M++  G        TS     L+     ++   + +            V+I   +++
Sbjct: 200 VPAMIYILGMPTKVVVGTSLFQIILVTAFTTMLHATTNYT-----------VDIVLAVLL 248

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L   ++   + T++   +  + L I  ++++      
Sbjct: 249 LVGGVIGAQIGTRIGVYLKAEQLRILLALMVIAVCAK 285



 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+     G L+ + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 178 ILVGVCVGILAAIMGVGGGFIMVPAMIYIL-------GMPTKVVVGTSLFQIILVTAFTT 230

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H     T+++ +    +    I   + + +  ++    L    A+  + +   +    
Sbjct: 231 MLHATTNYTVDIVLAVLLLVGGVIGAQIGTRIGVYLKAEQLRILLALMVIAVCAKLGLDL 290

Query: 146 RLYCER 151
            L    
Sbjct: 291 LLMPAE 296


>gi|297567502|ref|YP_003686474.1| hypothetical protein Mesil_3139 [Meiothermus silvanus DSM 9946]
 gi|296851951|gb|ADH64966.1| protein of unknown function DUF81 [Meiothermus silvanus DSM 9946]
          Length = 280

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 58/287 (20%), Positives = 108/287 (37%), Gaps = 47/287 (16%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +++  LI + S L+G +  L G+GGG+++VP+L   F+       + +H A+G SL  + 
Sbjct: 4   LEFSLLIFLGSLLAGGVGALTGLGGGVILVPLLVLGFK-------VDLHYALGASLISVI 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  +   + R G  N++I         +  ++ + ++  + KS++   F +  L    
Sbjct: 57  ATSSGAASAYVREGYSNLRIGMFLEVATTLGALLGAHLVGILPKSWVATVFGVALLYSAF 116

Query: 140 LMLKRD----------------RLYCERKFPDNYVK-----------YIWGMVTGFLSGA 172
              +                  RL  E  +P                +    V G LSG 
Sbjct: 117 QSFQDRYKDGQPSTVPSDPLAVRLRMESTYPTPQGLQPYTVHRVLGGFSLMGVAGMLSGL 176

Query: 173 LGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF 231
           LG+G G    L M    G     +T TS  +  + A  +  V +  G+    L       
Sbjct: 177 LGIGSGAVKVLAMERVMGLPYKVSTTTSNFMIGVTAAASAGVYLSRGYIDPLLA------ 230

Query: 232 VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             +  +L +   S+L   + +K +       L + F  ++       
Sbjct: 231 --MPVMLGVFLGSLLGARILSKAA----PGRLRLLFVGVIALLGVQM 271



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G LSGL G+G G V V  + +          +   V+  TS  +I  T+  S   +  
Sbjct: 169 VAGMLSGLLGIGSGAVKVLAMERVM-------GLPYKVSTTTSNFMIGVTAAASAGVYLS 221

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G I+  +    +  + + +++ + ++S      L   F     L+G+ M+ +
Sbjct: 222 RGYIDPLLAMPVMLGVFLGSLLGARILSKAAPGRLRLLFVGVIALLGVQMIYQ 274


>gi|91225241|ref|ZP_01260409.1| hypothetical protein V12G01_20778 [Vibrio alginolyticus 12G01]
 gi|91189880|gb|EAS76152.1| hypothetical protein V12G01_20778 [Vibrio alginolyticus 12G01]
          Length = 261

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 94/267 (35%), Gaps = 29/267 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+      
Sbjct: 7   TMLLVLALVAFVAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + +      +  +           + +L +  +   +L K   +  L   + 
Sbjct: 58  ASSTAAFTYYKKRLFKPQCWRRAFVATLFGATLGTLFVDAISTDWLEKGLPLVILAAALY 117

Query: 141 MLKRDRLYCERKFPDN-------YVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASI 192
            +     +   + P           +Y+ G+  GF  G  G G G F T   M  Y  +I
Sbjct: 118 TVFHKTPHSAHQSPIPEPCPKLHKKQYMQGLSIGFYDGLAGPGTGAFWTVSSMALYRLNI 177

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A+  +  ++    F +L+   +            LG +N    L +    +    +  
Sbjct: 178 LLASGLAKAMNFTSNFTSLITFAF------------LGHINWVLGLTMGVCLMAGAFVGA 225

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             +   G K++   F  ++   +   A
Sbjct: 226 HSAIRFGSKFIRPVFVTVVSILAIKLA 252


>gi|15641858|ref|NP_231490.1| hypothetical protein VC1856 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121591486|ref|ZP_01678757.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121730143|ref|ZP_01682539.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147673887|ref|YP_001217390.1| hypothetical protein VC0395_A1447 [Vibrio cholerae O395]
 gi|153820117|ref|ZP_01972784.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153823811|ref|ZP_01976478.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|153825221|ref|ZP_01977888.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|153830578|ref|ZP_01983245.1| putative membrane protein [Vibrio cholerae 623-39]
 gi|227081985|ref|YP_002810536.1| putative Inner membrane protein [Vibrio cholerae M66-2]
 gi|229529121|ref|ZP_04418511.1| hypothetical protein VCG_002214 [Vibrio cholerae 12129(1)]
 gi|298498105|ref|ZP_07007912.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9656385|gb|AAF95004.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121546659|gb|EAX56843.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121628104|gb|EAX60642.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|126509335|gb|EAZ71929.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126518672|gb|EAZ75895.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146315770|gb|ABQ20309.1| putative membrane protein [Vibrio cholerae O395]
 gi|148873940|gb|EDL72075.1| putative membrane protein [Vibrio cholerae 623-39]
 gi|149741200|gb|EDM55251.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|227009873|gb|ACP06085.1| putative Inner membrane protein [Vibrio cholerae M66-2]
 gi|227013754|gb|ACP09964.1| putative Inner membrane protein [Vibrio cholerae O395]
 gi|229332895|gb|EEN98381.1| hypothetical protein VCG_002214 [Vibrio cholerae 12129(1)]
 gi|297542438|gb|EFH78488.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 259

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 93/264 (35%), Gaps = 28/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+       S
Sbjct: 10  IMVLALVAFIAGFIDAVAG-GGGMLTVPALLSL--------GLPPHLALGTNKLAATFAS 60

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R    +    K       I  ++ +L +  +   +L K   +  L   +  +
Sbjct: 61  STAAWTYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTV 120

Query: 143 KRDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
                  E+             + + G+  GF  G  G G G F T   M  Y  +I  A
Sbjct: 121 LHRPHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILLA 180

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++    F +L+                LG ++    L +    +    +    +
Sbjct: 181 SGLAKAMNLTSNFTSLVTFAL------------LGHIDWLLGLTMGVCLMAGAYVGAHSA 228

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G  ++   F +++   +   A
Sbjct: 229 IRFGAPFIRPLFILVVTILAGKLA 252


>gi|229139683|ref|ZP_04268253.1| hypothetical protein bcere0013_27930 [Bacillus cereus BDRD-ST26]
 gi|228643814|gb|EEL00076.1| hypothetical protein bcere0013_27930 [Bacillus cereus BDRD-ST26]
          Length = 336

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 92/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A  
Sbjct: 30  TITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE- 87

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   + +  +S++    +    ++
Sbjct: 88  ------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFIGACFLSNLPGDVIKPYISV 141

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R     ++    K          G+  GF+    G G G  T  ++L  
Sbjct: 142 FLFTLGVYILLRFIIQKQVVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLAR 201

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       ++  A +    S GW            V+   V  ++   I+ 
Sbjct: 202 GNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFSLMLGGIVA 251

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  ++    L +    ++  T+  
Sbjct: 252 APIAAWLVRIVPSHLLGVLVGGLIIFTNIR 281


>gi|169335362|ref|ZP_02862555.1| hypothetical protein ANASTE_01774 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258100|gb|EDS72066.1| hypothetical protein ANASTE_01774 [Anaerofustis stercorihominis DSM
           17244]
          Length = 255

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 95/267 (35%), Gaps = 25/267 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++    + I++   +G  +GL G+    V+ P+L         +       A+  +L   
Sbjct: 1   MIFSYLIYIISGLGAGIGTGLAGLSAAAVISPMLITFLGFNAYE-------AVSIALASD 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              S +S   + ++  I++K     +  + I TVV S + S V  S +         L+G
Sbjct: 54  VLASAVSAYIYYKNKNIDIKNGVIMLIAVLIFTVVGSYIASIVPNSTMGSFSVFMTFLLG 113

Query: 139 ILMLKRDRLYCERKFPDN------YVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
           I  + +  +  +                I G++ GF+ G +G GGG+   L++    G  
Sbjct: 114 IKFIVKPVMTTKENLEKKDKKSMAVSSVICGILIGFICGFIGAGGGMMMLLILTSVLGYE 173

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           +  A  TS  +    AF   L         +           I A++  +  + +   +A
Sbjct: 174 LKTAVGTSVFIMTFTAFTGFLSHTAISSAPD-----------IPALITCIIATFVGARVA 222

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              +     + L     +++       
Sbjct: 223 ALFANKSTPEKLNRITGIVLAVLGLSM 249



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 8/118 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   L G + G  G GGG++M+ +L+             +  A+GTS+ ++  T+   F
Sbjct: 141 VICGILIGFICGFIGAGGGMMMLLILTSVL-------GYELKTAVGTSVFIMTFTAFTGF 193

Query: 87  MEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + H       ++  L   I    +   V +L  +      LN+   I   ++G+ M+ 
Sbjct: 194 LSHTAISSAPDIPALITCIIATFVGARVAALFANKSTPEKLNRITGIVLAVLGLSMIL 251


>gi|260574562|ref|ZP_05842566.1| protein of unknown function DUF81 [Rhodobacter sp. SW2]
 gi|259023458|gb|EEW26750.1| protein of unknown function DUF81 [Rhodobacter sp. SW2]
          Length = 306

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 102/289 (35%), Gaps = 55/289 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + +FL    V     L++    + G LSG+FGVGGG ++ P+L       GI  +    V
Sbjct: 1   MQIFLPIAEVSVNAYLLLGIGGVVGFLSGMFGVGGGFLITPLLFFI----GIPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS----- 124
           A+ T    +  +SV   +   R   ++ ++    +    + +     + + + K+     
Sbjct: 53  AVATGANQVVASSVSGVLAQLRRKAVDFRMGVVLLAGGMLGSAFGIWVFALLTKAGQIDV 112

Query: 125 FLNKAFAIFCLLMGILMLK------------------------------RDRLYCERKFP 154
           F+  ++ +F  ++G LMLK                              + +      F 
Sbjct: 113 FVQLSYVLFLGIVGALMLKESLGTLLRTRGGRAPVARAHTHTWVHGLPLKVKFRTSGLFI 172

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLV 213
                   G V GFLS  +GVGGG      M++  G        TS      +     L+
Sbjct: 173 SVLPPLAVGAVVGFLSAIMGVGGGFIMVPAMIYLLGMPTKVVIGTSLFQIIFVTAFTTLM 232

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
           +  +              V+I    +++   ++   L  ++   +  + 
Sbjct: 233 QAVTNHT-----------VDIVLAALLIFGGVIGAQLGARVGVRLKAEQ 270


>gi|238785991|ref|ZP_04629953.1| Inner membrane protein yfcA [Yersinia bercovieri ATCC 43970]
 gi|238713095|gb|EEQ05145.1| Inner membrane protein yfcA [Yersinia bercovieri ATCC 43970]
          Length = 268

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 95/234 (40%), Gaps = 25/234 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ V + L+G +  + G GGGL+ VP L            +    A+ T+       S  
Sbjct: 13  ILFVVALLAGFIDSIAG-GGGLLTVPALLAV--------GLPPAQALATNKLQSVGGSFS 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +   R G +N+K  K  I +  + +++ ++++ H+    L +   +  + +G+  L  
Sbjct: 64  ASLYFIRRGAVNLKDQKLTIVLTLVGSMLGAILVQHMRADILRQILPLLVIGIGVYFLVT 123

Query: 145 DRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSA 200
            +L     +R+        I G   GF  G  G G G F  L  +   G ++ K+TA + 
Sbjct: 124 PKLGEFDQKRRLSALPFALIAGGGVGFYDGFFGPGAGSFYALAFVTLCGFNLAKSTAHAK 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            ++       L   I  G  +     WS+G       L++L   +L   L   +
Sbjct: 184 ILNFTSNLGGLTFFIVGGKVV-----WSIG-------LVMLVGQVLGARLGAHM 225


>gi|161528556|ref|YP_001582382.1| hypothetical protein Nmar_1048 [Nitrosopumilus maritimus SCM1]
 gi|160339857|gb|ABX12944.1| protein of unknown function DUF81 [Nitrosopumilus maritimus SCM1]
          Length = 257

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 96/256 (37%), Gaps = 24/256 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +I   F +G L  + G+GGG+++VPVL+      G   +     A   SL      +V
Sbjct: 5   LWLIPLGFAAGVLGSMIGLGGGVIVVPVLTFL----GFPPTA----AASNSLFAALSNAV 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S M + +   I   +      +    T++ +++ S V        F    +     +  
Sbjct: 57  ASTMSYSKQKRIEYSLGLKLGLLSVPGTILGAIVSSDVGSDIFKALFGFVLIASAAYIFL 116

Query: 144 RDRLYCERKFPDNYVK---YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATS 199
           R ++  + K     +           G +S   G+GGGI    LM+   G ++ KA  TS
Sbjct: 117 RKKIESKEKKISLQMMIFAIGASFFAGIISSFFGIGGGIVFVPLMVVGMGMTMKKAAPTS 176

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +    +   ++V               LG  +     ++   S +   +  +LS  I 
Sbjct: 177 QMILLFASSSGVIVHSL------------LGHPDFLQSGLLAIGSFIGGLVGARLSIDIK 224

Query: 260 KKYLTIGFSMIMFTTS 275
           ++ L I  S+++   +
Sbjct: 225 ERSLQILVSVVILIAA 240



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 7/126 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +   I ASF +G +S  FG+GGG+V VP++        +   + M  A  TS  ++ 
Sbjct: 129 LQMMIFAIGASFFAGIISSFFGIGGGIVFVPLMV-------VGMGMTMKKAAPTSQMILL 181

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S    + H   G  +            I  +V + +   + +  L    ++  L+   
Sbjct: 182 FASSSGVIVHSLLGHPDFLQSGLLAIGSFIGGLVGARLSIDIKERSLQILVSVVILIAAG 241

Query: 140 LMLKRD 145
            +    
Sbjct: 242 KLFFDS 247


>gi|308235758|ref|ZP_07666495.1| hypothetical protein GvagA14_05992 [Gardnerella vaginalis ATCC
           14018]
          Length = 272

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 57/261 (21%), Positives = 94/261 (36%), Gaps = 25/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I LI+    L+G LSGLFGVGGG+V+VP L+   +            A  TSL  I  TS
Sbjct: 20  IVLIVFIGLLAGFLSGLFGVGGGMVIVPALTVFMKFD-------QRHATATSLVAIIITS 72

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   + +  +G ++       I      + +       + K      F +F LL+ I   
Sbjct: 73  LCGSIVYGLNGKVSFLSAFFLIIGSVFGSQIGVYFSHILPKKIFPWCFTLFVLLV-ICSS 131

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALG-----VGGGIFTNLLMLFYGASIYKATA 197
           +         F  +++K I  +  G +SG         GGGI    + L  G     A  
Sbjct: 132 QVWIPLRNVDFNVSFLKAICLIFIGVVSGIFSGILGVGGGGIIVPCVQLLLGMGDLMARG 191

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T+  V+        +      +       ++ G       +II   +     L   ++  
Sbjct: 192 TALLVTLPTVISGSIANARYHYTH-----FTEG-------IIIGIFATFTVNLGAIIARS 239

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           I      I F + +F+     
Sbjct: 240 ISPFICNILFCIFLFSVCLQM 260



 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 13/136 (9%)

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
             + R+    +  F +  +    G++ GFLSG  GVGGG+     +  F       ATAT
Sbjct: 4   RYMFRNIFKIKYNFHNIVLIVFIGLLAGFLSGLFGVGGGMVIVPALTVFMKFDQRHATAT 63

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S     + +    +V   +G             V+  +   ++  S+  + +    S+++
Sbjct: 64  SLVAIIITSLCGSIVYGLNGK------------VSFLSAFFLIIGSVFGSQIGVYFSHIL 111

Query: 259 GKKYLTIGFSMIMFTT 274
            KK     F++ +   
Sbjct: 112 PKKIFPWCFTLFVLLV 127



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 33/84 (39%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +A GT+L V  PT +   + + R+   +             T  + +++   +     N 
Sbjct: 188 MARGTALLVTLPTVISGSIANARYHYTHFTEGIIIGIFATFTVNLGAIIARSISPFICNI 247

Query: 129 AFAIFCLLMGILMLKRDRLYCERK 152
            F IF   + + M+ +  +  + K
Sbjct: 248 LFCIFLFSVCLQMILKTGILAKNK 271


>gi|153213072|ref|ZP_01948610.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124116119|gb|EAY34939.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 259

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 94/264 (35%), Gaps = 28/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+       S
Sbjct: 10  IMVLALVAFIAGFIDAVAG-GGGMLTVPALLSL--------GLPPHLALGTNKLAATFAS 60

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R    +    K       I  ++ +L +  +  ++L K   +  L   +  +
Sbjct: 61  STAAWTYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTNWLRKVLPLIILAAALYTV 120

Query: 143 KRDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
                  E+             + + G+  GF  G  G G G F T   M  Y  +I  A
Sbjct: 121 LHRPHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILLA 180

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++    F +L+                LG ++    L +    +    +    +
Sbjct: 181 SGLAKAMNLTSNFTSLVTFAV------------LGHIDWLLGLTMGVCLMAGAYVGAHSA 228

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G  ++   F +++   +   A
Sbjct: 229 IRFGAPFIRPLFILVVTILAGKLA 252


>gi|89073477|ref|ZP_01160000.1| hypothetical membrane spanning protein [Photobacterium sp. SKA34]
 gi|89050741|gb|EAR56222.1| hypothetical membrane spanning protein [Photobacterium sp. SKA34]
          Length = 257

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 95/266 (35%), Gaps = 28/266 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +  +G +  + G GGG++ VP L            +  H+A+GT+    + 
Sbjct: 8   STLLILGIIALAAGFIDAVAG-GGGMLTVPALLSL--------GLQPHIALGTNKLAASF 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + +    + +          I  +  +L+++ +   +L K   +    + I 
Sbjct: 59  ASATAAWTYYKKNLFSPRFWLASFIATFIGAITGTLIVNLISSEWLEKGLPLLIFAVAIY 118

Query: 141 MLKRDRLYCERKFPDNYV------KYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIY 193
            +   +   E+             +++ G   GF  G  G G G F T   M+ Y   + 
Sbjct: 119 TIWHPQPKEEQYVLPPVTPILKLKQWLQGTSIGFYDGVAGPGTGAFWTVSSMILYRLDML 178

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +A   +  ++      +L+  I             LG VN    L +    +L   +   
Sbjct: 179 RACGLAKAMNFTSNITSLVTFIV------------LGQVNFALGLTMGICLMLGAYIGAH 226

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +   G K++   F  ++   +   A
Sbjct: 227 SAIRFGAKFIRPVFVTVVLILAIKLA 252


>gi|218898127|ref|YP_002446538.1| hypothetical protein BCG9842_B2179 [Bacillus cereus G9842]
 gi|228901582|ref|ZP_04065761.1| hypothetical protein bthur0014_27720 [Bacillus thuringiensis IBL
           4222]
 gi|228966001|ref|ZP_04127068.1| hypothetical protein bthur0004_28200 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|218543836|gb|ACK96230.1| putative membrane protein [Bacillus cereus G9842]
 gi|228793671|gb|EEM41207.1| hypothetical protein bthur0004_28200 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228858047|gb|EEN02528.1| hypothetical protein bthur0014_27720 [Bacillus thuringiensis IBL
           4222]
          Length = 336

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 92/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A  
Sbjct: 30  IITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE- 87

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   V +  +S++    +    ++
Sbjct: 88  ------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISV 141

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R     ++    K          G+  GF+    G G G  T  ++L  
Sbjct: 142 FLFTLGVYILLRFVLQKQIVASNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLAR 201

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       ++  A +    S GW            V+   V  ++   I+ 
Sbjct: 202 GNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALMLGGIVA 251

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  ++    L +    ++  T+  
Sbjct: 252 APIAAWLVRIVPAHLLGVLVGGLIIFTNIR 281


>gi|74318753|ref|YP_316493.1| hypothetical protein Tbd_2735 [Thiobacillus denitrificans ATCC
           25259]
 gi|74058248|gb|AAZ98688.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 266

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 92/267 (34%), Gaps = 38/267 (14%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           VA   +G + GLFG GG ++  P L            +    A+  SLG++A T+ ++ +
Sbjct: 7   VAGAATGIVLGLFGSGGSIIATPALLYLL-------DVEPKSAIAMSLGIVAVTATIAAL 59

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR- 146
           ++ R G +++ +   +     + T   + +      +     FA+        MLK  R 
Sbjct: 60  DNWRRGNVDVSVAAVFGLFGVLGTYAGARIGVVTPVAIQLAVFALVMYAAAWRMLKPARL 119

Query: 147 LYCERKFPDNYVKYIWGMVTGFLS------GALGVGGGI------------FTNLLMLFY 188
                              +G  S         G+G G+                L+L  
Sbjct: 120 PAVASGDLSVSAGAAALPCSGLFSPCMGHMALHGIGVGVLTGLVGVGGGFLIVPALVLLS 179

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
              +  A  TS  + A  ++              G  P     +N G +     ++++ +
Sbjct: 180 RIPMKTAVGTSLAIVAAKSYAGFAGY-------TGAVP-----INWGLMAGFTAVTVVAS 227

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTS 275
              T+L++   +  L   FS+ +   +
Sbjct: 228 FAGTRLAHRFSQDMLKRTFSVFLLFVA 254



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 41/100 (41%), Gaps = 7/100 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            ++VP L            I M  A+GTSL ++A  S   F  +     IN  ++  +  
Sbjct: 169 FLIVPALVLL-------SRIPMKTAVGTSLAIVAAKSYAGFAGYTGAVPINWGLMAGFTA 221

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           V  + +   + +     +  L + F++F L +   +L + 
Sbjct: 222 VTVVASFAGTRLAHRFSQDMLKRTFSVFLLFVATYILLKS 261


>gi|300119626|ref|ZP_07057169.1| permease [Bacillus cereus SJ1]
 gi|298722995|gb|EFI63894.1| permease [Bacillus cereus SJ1]
          Length = 251

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         + + + S + S +   
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGALGSYIGSKIGSLIPGH 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFP-----------DNYVKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +   +  R+             +       G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGMMAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 203 DHILLLQVLIGTMLGAYIGAKFTNYAPRMLLK--FSMIM 239



 Score = 37.0 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           KD   + I   I    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 130 KDFSKENIMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 182

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 183 LVILPIAIGGGLGYSSEGYLDHILLLQVLIGTMLGAYIGAKFTNYAPRMLLK 234


>gi|90580010|ref|ZP_01235818.1| hypothetical membrane spanning protein [Vibrio angustum S14]
 gi|90438895|gb|EAS64078.1| hypothetical membrane spanning protein [Vibrio angustum S14]
          Length = 257

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 93/266 (34%), Gaps = 28/266 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +  +G +  + G GGG++ VP L            +  H+A+GT+    + 
Sbjct: 8   STLLILGIIALAAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAASF 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + +    + +          I  +  +L+++ +   +L K   +    + I 
Sbjct: 59  ASATAAWTYYKKNLFSPRFWLVSFIATFIGAITGTLIVNLISSEWLEKGLPLLIFAVAIY 118

Query: 141 MLKRDRLY------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIY 193
            +   +                  +++ G   GF  G  G G G F T   M+ Y   + 
Sbjct: 119 TIWHPQPKDEQYVLPSVTPILKLKQWLQGTSIGFYDGVAGPGTGAFWTVSSMILYRLDML 178

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +A   +  ++      +L+  I             LG VN    L +    +L   +   
Sbjct: 179 RACGLAKAMNFTSNITSLVTFIV------------LGQVNFALGLTMGICLMLGAYIGAH 226

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +   G K++   F  ++   +   A
Sbjct: 227 SAIRFGAKFIRPVFVTVVLILAIKLA 252


>gi|330808365|ref|YP_004352827.1| membrane protein [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327376473|gb|AEA67823.1| Conserved hypothetical protein, membrane protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 249

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 84/230 (36%), Gaps = 17/230 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G+   +   +A GT+L ++ P  +++   + +   I ++ +     +      + 
Sbjct: 29  AIPVLGVWFGLDQQLAQGTALVMVVPNVMLALWRYHQRNRIELRHVLPLASMGFCFAWLG 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGIL----MLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           S+    +D + +   F  F + + +     M   +     +         + G  +G + 
Sbjct: 89  SIWAVGIDANSMRIGFVAFLIALTLYNLARMFAANAPASAQMRYGWPWLAVLGAASGTMG 148

Query: 171 GALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G  GVGG +    ++   +G S   A   S  ++             + +  +    WS+
Sbjct: 149 GLFGVGGAVVATPILTSIFGTSQVVAQGLSLALALP-----STGVTLATYAFHHEVDWSI 203

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           G       L +    +L      K+++ + ++ L   F   +   + + A
Sbjct: 204 G-------LPLAVGGLLSISWGVKVAHALPERLLRGLFCGFLVLCAVLLA 246



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            + V    SGT+ GLFGVGG +V  P+L+  F            VA G SL +  P++ +
Sbjct: 136 WLAVLGAASGTMGGLFGVGGAVVATPILTSIF-------GTSQVVAQGLSLALALPSTGV 188

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +   +  H  ++  I         ++      +   + +  L   F  F +L  +L+  +
Sbjct: 189 TLATYAFHHEVDWSIGLPLAVGGLLSISWGVKVAHALPERLLRGLFCGFLVLCAVLLAFK 248


>gi|260439258|ref|ZP_05793074.1| conserved hypothetical protein [Butyrivibrio crossotus DSM 2876]
 gi|292808272|gb|EFF67477.1| conserved hypothetical protein [Butyrivibrio crossotus DSM 2876]
          Length = 258

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 97/267 (36%), Gaps = 25/267 (9%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +   I +   A   +G  +G  G+    V+ P+L    ++          +A+G +L  
Sbjct: 2   DIFITIIVTFFAGMGAGLGTGFAGMSAAAVISPMLISFLKMDPY-------MAVGIALSS 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
               S +S   + ++  +++K     +  + + T + S + S +  + +     I    +
Sbjct: 55  DVLASAISAYTYGKNKNLDIKNGLIMMVSVLVFTFIGSYIASLLPSTTMGNFSVIMTFFL 114

Query: 138 GILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGA 190
           G+  + +  +  +    D   K         G++ GF+ G +G GGG+   L++    G 
Sbjct: 115 GVKFILKPVMATKESMSDVPAKKRAIQSLACGILIGFICGFVGAGGGMMMLLILTSVLGY 174

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            +  A  TS  +    A    +     G    G+P        I   ++ +  + +   +
Sbjct: 175 ELKTAVGTSVFIMTFTALTGAVSHFAIG----GMPD-------IPVFVLCVVFTFIWARI 223

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           A   +     + L     +I+     V
Sbjct: 224 AAIFANKAKPETLNRVTGVILMLLGIV 250


>gi|308234199|ref|ZP_07664936.1| hypothetical protein AvagD15_04084 [Atopobium vaginae DSM 15829]
 gi|328944457|ref|ZP_08241919.1| hypothetical protein HMPREF0091_11144 [Atopobium vaginae DSM 15829]
 gi|327491041|gb|EGF22818.1| hypothetical protein HMPREF0091_11144 [Atopobium vaginae DSM 15829]
          Length = 275

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 56/261 (21%), Positives = 91/261 (34%), Gaps = 25/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I LI+    L+G LSGLF VGGG+V+VP L+   +            A  TSL  I  TS
Sbjct: 20  IVLIVFIGLLAGFLSGLFAVGGGIVIVPALTVFMKFD-------QRHATATSLVAIIITS 72

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   + +   G ++       I      + +       + K      F +F LL+ I   
Sbjct: 73  LCGSIVYGLDGKVSFLSAFFLIIGSVFGSQIGVYFSHILPKKIFPWCFTLFVLLV-ICSS 131

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALG-----VGGGIFTNLLMLFYGASIYKATA 197
           +         F   +++ I  +  G  SG         GGGI    + L  G     A  
Sbjct: 132 QVWIPLRNVDFNVGFLEAICLIFIGVFSGIFSGILGVGGGGIIVPCVQLLLGMGDLMARG 191

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T+  V+   A    +      +       ++ G       +II   +     L   ++  
Sbjct: 192 TALLVTLPTAISGSIANARYHYTH-----FTEG-------IIIGIFATFTVKLGAIIASS 239

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           I      I F + +F+     
Sbjct: 240 ISPFICNILFCIFLFSACLRM 260



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 51/136 (37%), Gaps = 13/136 (9%)

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
             + R+    +  F +  +    G++ GFLSG   VGGGI     +  F       ATAT
Sbjct: 4   RYMLRNIFKTKYNFHNIVLIVFIGLLAGFLSGLFAVGGGIVIVPALTVFMKFDQRHATAT 63

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S     + +    +V    G             V+  +   ++  S+  + +    S+++
Sbjct: 64  SLVAIIITSLCGSIVYGLDGK------------VSFLSAFFLIIGSVFGSQIGVYFSHIL 111

Query: 259 GKKYLTIGFSMIMFTT 274
            KK     F++ +   
Sbjct: 112 PKKIFPWCFTLFVLLV 127



 Score = 38.1 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 34/84 (40%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +A GT+L V  PT++   + + R+   +             T  + +++ S +     N 
Sbjct: 188 MARGTALLVTLPTAISGSIANARYHYTHFTEGIIIGIFATFTVKLGAIIASSISPFICNI 247

Query: 129 AFAIFCLLMGILMLKRDRLYCERK 152
            F IF     + M+ +  +  + K
Sbjct: 248 LFCIFLFSACLRMILKTGILAKNK 271


>gi|313899382|ref|ZP_07832893.1| putative membrane protein [Clostridium sp. HGF2]
 gi|312955835|gb|EFR37492.1| putative membrane protein [Clostridium sp. HGF2]
          Length = 255

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 103/265 (38%), Gaps = 25/265 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++    +  +A   +G  +G  G+    V+ P+L     +          +A+G +L   
Sbjct: 1   MLYTFVICFIAGIGAGLGTGFAGMSAAAVISPMLITFLHMEPY-------MAVGIALASD 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              S +S   + RHG ++++     +  + I T+V S + S V  + +        LL+G
Sbjct: 54  VLASAVSAYTYGRHGNLDIRNGLVMMIFVLIFTLVGSYVSSLVPGTAMGGFSTFMTLLLG 113

Query: 139 ILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
           I  + R  +  +        K       + G + GF+ G +G GGG+   L++    G  
Sbjct: 114 IKFIVRPVMTTKSSMEHTDPKKRLMQSMLSGAMVGFICGFIGAGGGMMMLLILTSVLGYE 173

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           +  A  TS  +    AF   +     G    G+P  +       A+++ +  ++L   +A
Sbjct: 174 LKTAVGTSVFIMTFTAFTGAVSHFTIG----GMPDMT-------ALVLCIASTLLWARIA 222

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSF 276
            + +     K L     +++     
Sbjct: 223 ARFANKASAKTLNRATGVVLTVLGI 247


>gi|229589238|ref|YP_002871357.1| hypothetical protein PFLU1719 [Pseudomonas fluorescens SBW25]
 gi|229361104|emb|CAY47967.1| putative membrane protein [Pseudomonas fluorescens SBW25]
          Length = 249

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 81/228 (35%), Gaps = 17/228 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G+   +   +A GT+L ++ P  +++   + +   I ++       +      + 
Sbjct: 29  AIPVLGVLFGLDQQLAQGTALVMVVPNVMLALWRYHQRNRIELRHALPLGVMGFTFAWLG 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMG----ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           S+    +D   +   F  F L +     + M  R+     +         + G  +G + 
Sbjct: 89  SIWAVGLDAGAMRIGFIAFLLTLSAYNLLRMFTRNAPPTAQMRYSWPWLGVLGAASGSMG 148

Query: 171 GALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G  GVGG +    ++   +G +   A   S  ++       L+   +          W +
Sbjct: 149 GLFGVGGAVVATPVLTSLFGTTQVVAQGLSLALALPSTGVTLVTYAWH-----QEVDWMI 203

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G       + +    +L      K+++ + ++ L   F   +   + +
Sbjct: 204 G-------VPLAVGGLLSISWGVKVAHALPERILRGLFCGFLVVCAVM 244



 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            + V    SG++ GLFGVGG +V  PVL+  F            VA G SL +  P++ +
Sbjct: 136 WLGVLGAASGSMGGLFGVGGAVVATPVLTSLF-------GTTQVVAQGLSLALALPSTGV 188

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + + +  H  ++  I         ++      +   + +  L   F  F ++  +++  +
Sbjct: 189 TLVTYAWHQEVDWMIGVPLAVGGLLSISWGVKVAHALPERILRGLFCGFLVVCAVMLTFK 248


>gi|251796962|ref|YP_003011693.1| hypothetical protein Pjdr2_2960 [Paenibacillus sp. JDR-2]
 gi|247544588|gb|ACT01607.1| protein of unknown function DUF81 [Paenibacillus sp. JDR-2]
          Length = 254

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 85/226 (37%), Gaps = 25/226 (11%)

Query: 54  KAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV 113
               ++ +     +H A+GT+L  +  +S+   + H R G + +K              V
Sbjct: 27  FIIAILTVAFGYPIHTALGTALAAMFFSSLSGSVSHYREGNMILKTGAIVGLAGAAGAWV 86

Query: 114 TSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER--KFPDNYVKY----------I 161
           +S   S + +  L    +      G+ +  R     +   K P   ++            
Sbjct: 87  SSGWSSFIPEDKLGWMTSGMLFSSGLALWFRMAYQAKNGGKSPSAPMQTSGMKFYASAAF 146

Query: 162 WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G+VTG LSG  G+G   F  L LML  G S+  A  T+  V   IA             
Sbjct: 147 IGLVTGALSGLFGIGSTPFIQLGLMLILGMSMRFAAGTTMLVIMPIALAGGAGY------ 200

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
                 +S+G+++I  ++ ++  ++L + +  K +  +    L   
Sbjct: 201 ------YSVGYLDIQLLIAVVIGTMLGSYIGAKFTKRVPAVMLKTC 240



 Score = 39.3 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +         ++G LSGLFG+G    +   L            + M  A GT++ VI 
Sbjct: 138 MKFYASAAFIGLVTGALSGLFGIGSTPFIQLGLMLIL-------GMSMRFAAGTTMLVIM 190

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           P ++     +   G +++++L   +    + + + +     V    L  
Sbjct: 191 PIALAGGAGYYSVGYLDIQLLIAVVIGTMLGSYIGAKFTKRVPAVMLKT 239


>gi|153011459|ref|YP_001372673.1| hypothetical protein Oant_4144 [Ochrobactrum anthropi ATCC 49188]
 gi|151563347|gb|ABS16844.1| protein of unknown function DUF81 [Ochrobactrum anthropi ATCC
           49188]
          Length = 283

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 91/276 (32%), Gaps = 49/276 (17%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
               + +A+F +  L G+ G+  G+ +VP L+  F        + +HVA+G S+  +   
Sbjct: 2   LALWLFIAAFGASALGGVLGMASGIFIVPALTLFF-------GVDIHVAIGASIVSVIAC 54

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  S     +    N+++         +  +    +I  V  S L   FA   +L    M
Sbjct: 55  SCGSAAPLLKRRLTNVRLAVVLETATTLGALTGVFLIGIVSTSVLYGLFAAILVLSAKQM 114

Query: 142 LKRDRLYCERKFPDN-----------------------------YVKYIWGMVTGFLSGA 172
           L R R       PD                               +        G +S  
Sbjct: 115 LVRRRDEIGATMPDAKSLATSLRLNSSFPDHISGQEVHYRVGHVPLGMALMYGAGLVSAL 174

Query: 173 LGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF 231
           LG+G G+     M       I  ++ATS  +  + A  +                   G 
Sbjct: 175 LGIGSGVLKIPAMDTALKLPIKVSSATSNFMIGVTAAASASAYFVR------------GD 222

Query: 232 VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           ++IG    I   S++   +  +L   +  + L I F
Sbjct: 223 IDIGITGPIALGSVIGALVGARLLMSLPAEKLRIFF 258



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 7/111 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V ++ L +   + +G +S L G+G G++ +P +  A +L        + V+  TS  +I 
Sbjct: 155 VGHVPLGMALMYGAGLVSALLGIGSGVLKIPAMDTALKL-------PIKVSSATSNFMIG 207

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
            T+  S   +   G I++ I         I  +V + ++  +    L   F
Sbjct: 208 VTAAASASAYFVRGDIDIGITGPIALGSVIGALVGARLLMSLPAEKLRIFF 258


>gi|149191747|ref|ZP_01869987.1| hypothetical protein VSAK1_04117 [Vibrio shilonii AK1]
 gi|148834436|gb|EDL51433.1| hypothetical protein VSAK1_04117 [Vibrio shilonii AK1]
          Length = 257

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 95/267 (35%), Gaps = 29/267 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F +G +  + G GGG++ VP L            +  H+A+GT+      
Sbjct: 7   SMLVILALVAFAAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + R    + +          I   + +L++  +   +L K   +  L   + 
Sbjct: 58  ASSTAAFTYYRKRLFSPECWYRAFIATLIGATIGTLVVDMISTEWLEKILPLIILAAALY 117

Query: 141 MLKRDRLYCERKFPDNYV-------KYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASI 192
            + +     + +   +         +Y+ G+  GF  G  G G G F T   M  Y  +I
Sbjct: 118 TVFQKAPQGDEQNKVHVGCPKFNRKQYLQGLSLGFYDGVAGPGTGAFWTVSSMALYRLNI 177

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A+  S  ++    F +L+                LG +N    L +    +    +  
Sbjct: 178 LFASGLSKAMNFTSNFTSLITFAV------------LGHINWVLGLTMGLCLMAGAYIGA 225

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             +   G K++   F  ++   +   A
Sbjct: 226 HSAIRFGAKFIRPIFVTVVSILAIKLA 252


>gi|229018387|ref|ZP_04175256.1| hypothetical protein bcere0030_29160 [Bacillus cereus AH1273]
 gi|229024617|ref|ZP_04181062.1| hypothetical protein bcere0029_29300 [Bacillus cereus AH1272]
 gi|228736682|gb|EEL87232.1| hypothetical protein bcere0029_29300 [Bacillus cereus AH1272]
 gi|228742907|gb|EEL93038.1| hypothetical protein bcere0030_29160 [Bacillus cereus AH1273]
          Length = 336

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
             S    ++    +  + +  +  F +  + G  G+  G+     L   F +     S  
Sbjct: 24  KVSFSFIITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASAS 82

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +H+A          T+  S   H + G ++   +        I   + +  +S++    +
Sbjct: 83  VHLAE-------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFIGACFLSNLPGDVI 135

Query: 127 NKAFAIFCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
               +IF   +G+ +L R     ++    K          G+  GF+    G G G  T 
Sbjct: 136 KPYISIFLFTLGVYILLRFLIQKQIVASNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITT 195

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIIL 241
            ++L  G    K   +       ++  A +    S GW            V+   V  ++
Sbjct: 196 PVLLARGNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFSLM 245

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              I+  P+A  L  ++    L +    ++  T+  
Sbjct: 246 LGGIVAAPIAAWLVRIVPSHLLGVLVGGLIIFTNIR 281


>gi|229179958|ref|ZP_04307303.1| hypothetical protein bcere0005_33040 [Bacillus cereus 172560W]
 gi|228603492|gb|EEK60968.1| hypothetical protein bcere0005_33040 [Bacillus cereus 172560W]
          Length = 245

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         I + + S   S +   
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 88

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +  ++  ++    Y                G+VTG ++G+ 
Sbjct: 89  LLHWFTAGMLFLSAIFMFIKLIMFQNKEKSSLYKHKEFSVNYLLKCVCLGLVTGMMAGSF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    +               S G++
Sbjct: 149 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGIGYS------------SEGYL 196

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 197 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR--FSMIM 233



 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K+  V+Y+   +    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 124 KEFSVNYLLKCVCLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 176

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 177 LVILPIAIGGGIGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR 228


>gi|58039041|ref|YP_191005.1| hypothetical protein GOX0571 [Gluconobacter oxydans 621H]
 gi|58001455|gb|AAW60349.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H]
          Length = 255

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 104/264 (39%), Gaps = 25/264 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I L +    L G   GL G GG ++ VP++     +         HVA+GTS   +A  
Sbjct: 2   HIALELACGVLIGFTLGLIGGGGSILAVPLMVYVVGVKNP------HVAIGTSAMAVAVN 55

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++   + H R GT+  K    +     +  ++ +     V+   L   FA+  +++G+LM
Sbjct: 56  ALTGLVSHARAGTVKWKCAAIFAPCGVVGALIGAAFGKAVNGQKLLLCFALLMVVVGVLM 115

Query: 142 LKRDRLYCER----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKAT 196
           L+  R   E        +     + G  TG LSG  G+GGG      ++      I  A 
Sbjct: 116 LRGRRNKGEAGAACNRQNMPRVMMAGAGTGVLSGFFGIGGGFLIVPALIACTRMPILNAV 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            TS    A +     L  + S            G+V+     + +   I+ +   T+ + 
Sbjct: 176 GTSLVAVAALGASTALSYMLS------------GYVDWVMGALFVAGGIVGSFFGTRAAK 223

Query: 257 MI--GKKYLTIGFSMIMFTTSFVF 278
            +      LT  F+ ++FT +   
Sbjct: 224 RLSGSGAALTTFFACVIFTVAAYM 247



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 9/122 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++A   +G LSG FG+GGG ++VP L            + +  A+GTSL  +A     +
Sbjct: 137 VMMAGAGTGVLSGFFGIGGGFLIVPALIAC-------TRMPILNAVGTSLVAVAALGAST 189

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS--FLNKAFAIFCLLMGILMLK 143
            + +   G ++  +   ++    + +   +     +  S   L   FA     +   M+ 
Sbjct: 190 ALSYMLSGYVDWVMGALFVAGGIVGSFFGTRAAKRLSGSGAALTTFFACVIFTVAAYMIW 249

Query: 144 RD 145
           + 
Sbjct: 250 KS 251


>gi|319650228|ref|ZP_08004374.1| hypothetical protein HMPREF1013_00979 [Bacillus sp. 2_A_57_CT2]
 gi|317398059|gb|EFV78751.1| hypothetical protein HMPREF1013_00979 [Bacillus sp. 2_A_57_CT2]
          Length = 258

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 103/263 (39%), Gaps = 18/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + ++ +I +  F+   +SG+ G+GG ++  P+L     L G+  +   H   G S   + 
Sbjct: 3   LTFLFVIFLIGFIGSYISGMVGIGGSIIKYPMLLYIPPLFGL-AAFSAHEVSGISAVQVF 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++     +R+ G +N  ++      + I +++ S     + +  +N  + +  L+  +
Sbjct: 62  FATIGGVWAYRKGGYLNKPLIIYMGSAILIGSIIGSYGSRFMTEGGINLVYGVLALIAAV 121

Query: 140 LMLKRDR-----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
           +M    +        + KF      +   +V          G  +   ++++        
Sbjct: 122 MMFVPKKGLDDIPLDQVKFNKWLAAFFALIVGIGAGIVGAAGAFLLVPIMLVVLKIPTRM 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             ATS  ++ + +  +   ++ +G               I A ++I+  S++ +PL    
Sbjct: 182 TIATSLAITFISSIGSTAGKLATGQVD-----------YIPAAIMII-ASLIASPLGAAA 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K L +  S+++  TS  
Sbjct: 230 GKRVNTKILQVILSVLILATSIK 252



 Score = 35.4 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 34/97 (35%), Gaps = 7/97 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            ++VP++    +       I   + + TSL +   +S+ S       G ++       I 
Sbjct: 165 FLLVPIMLVVLK-------IPTRMTIATSLAITFISSIGSTAGKLATGQVDYIPAAIMII 217

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              I + + +     V+   L    ++  L   I + 
Sbjct: 218 ASLIASPLGAAAGKRVNTKILQVILSVLILATSIKIW 254


>gi|56695290|ref|YP_165638.1| membrane protein [Ruegeria pomeroyi DSS-3]
 gi|56677027|gb|AAV93693.1| membrane protein [Ruegeria pomeroyi DSS-3]
          Length = 316

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 107/307 (34%), Gaps = 55/307 (17%)

Query: 9   SLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMH 68
           ++ ++L    V     L++    + G LSG+FGVGGG +M P+L       GI  +    
Sbjct: 10  NMQIYLPIAEVSVNAFLLLGLGGMVGILSGMFGVGGGFLMTPLLFFI----GIPPA---- 61

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK----- 123
           VA+ T    I  +S    + H R  T++ ++    +        +  ++ +++       
Sbjct: 62  VAVATEANQIVASSFSGVLAHFRRRTVDFRMGTILLIGGLSGAALGVVLFNYLKSLGQVD 121

Query: 124 SFLNKAFAIFCLLMGILML------------------------------KRDRLYCERKF 153
             +   + +F  ++G LM                                + R      +
Sbjct: 122 LLVKLCYVVFLGIIGGLMFIESLNAIRKSRKAGGAVPKRRQRGWIHAMPFKMRFRTSGLY 181

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                  + G++ G LS  +GVGGG      M++  G        TS      +     +
Sbjct: 182 ISVIPPIVVGLLVGVLSAIMGVGGGFIMVPAMIYLLGMPTKVVVGTSLFQIIFVTAFTTM 241

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           +   + + ++ +             +++L   ++   + T +   +  + L I  + ++ 
Sbjct: 242 LHATTNYTVDVV-----------LAVLLLVGGVIGAQIGTVIGARMKAEQLRILLAGLVL 290

Query: 273 TTSFVFA 279
                 A
Sbjct: 291 AVCAKLA 297



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IV   L G LS + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 188 IVVGLLVGVLSAIMGVGGGFIMVPAMIYLL-------GMPTKVVVGTSLFQIIFVTAFTT 240

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H     T+++ +    +    I   + +++ + +    L    A   L +   +    
Sbjct: 241 MLHATTNYTVDVVLAVLLLVGGVIGAQIGTVIGARMKAEQLRILLAGLVLAVCAKLALDL 300

Query: 146 RLYCER 151
            L    
Sbjct: 301 LLMPSE 306


>gi|257062790|ref|YP_003142462.1| predicted permease [Slackia heliotrinireducens DSM 20476]
 gi|256790443|gb|ACV21113.1| predicted permease [Slackia heliotrinireducens DSM 20476]
          Length = 277

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 55/288 (19%), Positives = 100/288 (34%), Gaps = 49/288 (17%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++   + ++A  L G LSGLFG+GGG +MVP+   AF L  I        A  TSL  + 
Sbjct: 1   MEMFVIAVLAGLLVGVLSGLFGIGGGTIMVPLFRLAFGLPPIG-------ATATSLFTVI 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           PTS+   ++H ++ T   K+         + + +  L  S      +  A A        
Sbjct: 54  PTSLSGLVKHVKNKTTIPKLGIAAGLAGAVMSPMGVLAASKSPGWAIMGATAAVLCYSSC 113

Query: 140 LMLKRDRLYCER--------KFPDNYVKYIW-----------------GMVTGFLS---- 170
            M  +                 P+N                         + G  +    
Sbjct: 114 TMFSKGVRKLRSDRAQAAGCPTPENTKLTCTEGVVAETFGLTKDVVWKVTLIGAFAGLVG 173

Query: 171 -GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
                 GG +   + +   G S+  A+ TS     ++A P  + +   G        +++
Sbjct: 174 GYVGVGGGFVMVPMFISVLGISMRLASGTSLIAVCILALPGAIEQAVLG-----NIHYTI 228

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G       L ++  S+  + L   L   + +  L I F+  +   + +
Sbjct: 229 G-------LAMIVGSMPGSYLGATLVKRVPEAVLRIMFACFLMVVAVI 269



 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 38/82 (46%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            I M +A GTSL  +   ++   +E    G I+  I    I      + + + ++  V +
Sbjct: 193 GISMRLASGTSLIAVCILALPGAIEQAVLGNIHYTIGLAMIVGSMPGSYLGATLVKRVPE 252

Query: 124 SFLNKAFAIFCLLMGILMLKRD 145
           + L   FA F +++ ++++  +
Sbjct: 253 AVLRIMFACFLMVVAVILIVNE 274


>gi|221321922|ref|ZP_03603216.1| hypothetical protein BsubsS_03204 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|255767147|ref|NP_388450.2| integral inner membrane protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|321314224|ref|YP_004206511.1| permease [Bacillus subtilis BSn5]
 gi|239938763|sp|O05493|YDHB_BACSU RecName: Full=UPF0721 transmembrane protein ydhB
 gi|225184774|emb|CAB12388.2| putative integral inner membrane protein [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|291483005|dbj|BAI84080.1| hypothetical protein BSNT_00982 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320020498|gb|ADV95484.1| permease [Bacillus subtilis BSn5]
          Length = 245

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/207 (24%), Positives = 82/207 (39%), Gaps = 19/207 (9%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +H A+GTSL  +A TS+     H R G I MKI         + +   + + S +   
Sbjct: 35  IPIHTALGTSLAGMAFTSLSGAYSHYREGNIQMKIGLIVGGFAAVGSFFGAKLTSFIPAD 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERK------FPDNYVKYIWGMVTGFLSGALGVGGG 178
            L+   A    L  IL+L R  +  E+               I G+  G LSG  G+G  
Sbjct: 95  LLHYLTAGMLFLSAILILIRLFILKEKAQVNQSTLSTYTRAVILGIAAGVLSGTFGIGSA 154

Query: 179 IFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
            F  + LM+    SI  +  T+  V   +A    +  I            + GFV+   +
Sbjct: 155 PFIQIGLMIMLNLSIRHSVGTTMLVIIPLAVGGGIGYI------------TEGFVDYVLL 202

Query: 238 LIILPISILITPLATKLSYMIGKKYLT 264
           + +L  ++    +  K + ++ K  L 
Sbjct: 203 VKVLVGTMCGAYVGAKFTNLMPKVVLK 229


>gi|217961088|ref|YP_002339656.1| hypothetical protein BCAH187_A3714 [Bacillus cereus AH187]
 gi|217067331|gb|ACJ81581.1| conserved hypothetical protein [Bacillus cereus AH187]
          Length = 251

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         + + + S + S +   
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGALGSYIGSKIGSLIPGH 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFP-----------DNYVKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +   +  R+             +       G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGMMAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 203 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK--FSMIM 239



 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 51/129 (39%), Gaps = 13/129 (10%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           KD   + I   I    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 130 KDFSKENIMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 182

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK------A 129
            VI P ++   + +   G ++  +L   +    +   + +   ++  +  L         
Sbjct: 183 LVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLKFSMIMTPV 242

Query: 130 FAIFCLLMG 138
           FA   LLMG
Sbjct: 243 FAGCMLLMG 251


>gi|153837318|ref|ZP_01989985.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
 gi|149749349|gb|EDM60122.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
 gi|328473244|gb|EGF44092.1| hypothetical protein VP10329_21240 [Vibrio parahaemolyticus 10329]
          Length = 261

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 93/267 (34%), Gaps = 29/267 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+      
Sbjct: 7   TMLLVLALVAFVAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + +      +          +   + +L +  +   +L K   +  L   + 
Sbjct: 58  ASSTAAFTYYKKRLFKPQCWGRAFAATLVGATLGTLFVDAISTDWLEKVLPLIILAAALY 117

Query: 141 MLKRDRLYCERKFPDN-------YVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASI 192
            +     +   + P           +Y+ G+  GF  G  G G G F T   M  Y  +I
Sbjct: 118 TVFHKTPHSPHQSPIPEPCPKLHKKQYLQGLSIGFYDGLAGPGTGAFWTVSSMALYRLNI 177

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A+  +  ++    F +L+                LG +N    L +    +    +  
Sbjct: 178 LLASGLAKAMNFTSNFTSLITFAI------------LGHINWVLGLTMGVCLMAGAFVGA 225

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             +   G K++   F  ++   +   A
Sbjct: 226 HSAIRFGSKFIRPVFVTVVSVLAIKLA 252


>gi|329765600|ref|ZP_08257176.1| Putative permease [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138038|gb|EGG42298.1| Putative permease [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 264

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 107/262 (40%), Gaps = 25/262 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L I++  + G   GL G GG ++ VP+L     +         HVA+GTS   I   +
Sbjct: 13  LFLSIISGVVVGFSLGLVGGGGSVLAVPLLLYVVGVKD------THVAIGTSALAIGIIA 66

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V +    R+  T+++K    +       T++ S +        L   FA+F +++GI+M+
Sbjct: 67  VFNIFYRRKTSTLHIKKGLTFALPGIGGTLLGSQLGLWTPPENLLILFAVFMVVIGIIMI 126

Query: 143 KRDRLYCERKFPDNYV------KYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKA 195
           K    + E     + +        + G   G LSG  G+GGG      M++  G +I +A
Sbjct: 127 KYKITHIEITSEKHGLISLKKNLPLSGFSVGILSGYFGIGGGFLIVPTMMYSGGLNILQA 186

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TS    +            +            G V++   L+ +   IL      K S
Sbjct: 187 IGTSLVSVSSFGLVTAGRYFVA------------GNVDLVIALLFIIGGILGGYFGIKTS 234

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
             I ++ +T  FS+++F  +  
Sbjct: 235 KKITQEKITKFFSILLFVVASY 256



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 52/119 (43%), Gaps = 7/119 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + ++ F  G LSG FG+GGG ++VP +            + +  A+GTSL  ++   +++
Sbjct: 149 LPLSGFSVGILSGYFGIGGGFLIVPTMMY-------SGGLNILQAIGTSLVSVSSFGLVT 201

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              +   G +++ I   +I    +           + +  + K F+I   ++   ++  
Sbjct: 202 AGRYFVAGNVDLVIALLFIIGGILGGYFGIKTSKKITQEKITKFFSILLFVVASYIIIN 260


>gi|299536328|ref|ZP_07049641.1| hypothetical protein BFZC1_09920 [Lysinibacillus fusiformis ZC1]
 gi|298728314|gb|EFI68876.1| hypothetical protein BFZC1_09920 [Lysinibacillus fusiformis ZC1]
          Length = 274

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 82/230 (35%), Gaps = 33/230 (14%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P        +G+   I     +G S+ ++  T + S + + +  T++ K    +      
Sbjct: 30  PATLYIGLNLGMIPDITPQKVVGLSVVMMIFTGLASTLSYMKSKTVDYKSGFIFFIGSIP 89

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN------------- 156
            T++ + +   +D    N  F I  +++ I++L RD+L   + F  N             
Sbjct: 90  GTILGAWVNKGLDLPSFNLYFGILLIILSIILLVRDKLKPVKWFVKNGMQQEFTDSEGKT 149

Query: 157 -------YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAF 208
                  +         GF SG  G+GGG      M + +    + A ATS  +  L + 
Sbjct: 150 YVYGYPIWFAITLTFGIGFASGLFGIGGGSMIVPAMIILFLFPPHVAVATSMFMVFLTSI 209

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 I            +LG V     + ++P + L   L   L+  I
Sbjct: 210 VNSASHI------------ALGHVPWLYTIPVIPGAYLGAKLGAALNKKI 247



 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 7/102 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I  +F  G  SGLFG+GGG ++VP +   F           HVA+ TS+ ++  TS
Sbjct: 156 IWFAITLTFGIGFASGLFGIGGGSMIVPAMIILFLF-------PPHVAVATSMFMVFLTS 208

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +++   H   G +        I    +   + + +   +   
Sbjct: 209 IVNSASHIALGHVPWLYTIPVIPGAYLGAKLGAALNKKIKSD 250


>gi|53804555|ref|YP_113574.1| hypothetical protein MCA1104 [Methylococcus capsulatus str. Bath]
 gi|53758316|gb|AAU92607.1| putative membrane protein [Methylococcus capsulatus str. Bath]
          Length = 301

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 80/239 (33%), Gaps = 28/239 (11%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++MVP+L                 A+ TSL V+  TS+ +   H R G +  K+   +  
Sbjct: 24  VLMVPMLVYV-------AGFGPKEAITTSLVVVCLTSLAALAGHIRGGRVCWKMGAVFGL 76

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR-----LYCERKFPDNYVKY 160
                        + +    L   F +  L   + ML+  R          + P      
Sbjct: 77  AGMAGAYGGGRTAAALPGGILLILFGLVMLATAVAMLRGRRGDAVPPGRAPQCPLRLPVL 136

Query: 161 IW---GMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIY 216
                G + G L+G +G GGG      +   G   ++ A ATS  V A+ +  ALL    
Sbjct: 137 AVLFDGGMVGALTGLVGAGGGFMVVPALNLLGRLPMHAAVATSLMVVAMNSLAALLGY-- 194

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            G  +      +           I   ++  + +   L+  +G   L   F   +   +
Sbjct: 195 -GGHVQVRYDLA---------GPIAGAAVGGSVVGGWLAAHVGGTTLRRMFGGFVALIA 243



 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 7/153 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++    + G L+GL G GGG ++VP L+           + MH A+ TSL V+A  S
Sbjct: 135 VLAVLFDGGMVGALTGLVGAGGGFMVVPALNLL-------GRLPMHAAVATSLMVVAMNS 187

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + + +  H  +   +           +VV   + +HV  + L + F  F  L+ + +L
Sbjct: 188 LAALLGYGGHVQVRYDLAGPIAGAAVGGSVVGGWLAAHVGGTTLRRMFGGFVALIAVFLL 247

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGV 175
            R+      +     V        G  +  +G+
Sbjct: 248 YRELTPERLEAVGGLVAAHADFFRGATAVLVGM 280


>gi|229128946|ref|ZP_04257921.1| hypothetical protein bcere0015_33900 [Bacillus cereus BDRD-Cer4]
 gi|229146239|ref|ZP_04274614.1| hypothetical protein bcere0012_33840 [Bacillus cereus BDRD-ST24]
 gi|228637298|gb|EEK93753.1| hypothetical protein bcere0012_33840 [Bacillus cereus BDRD-ST24]
 gi|228654491|gb|EEL10354.1| hypothetical protein bcere0015_33900 [Bacillus cereus BDRD-Cer4]
          Length = 245

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         I + + S   S +   
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 88

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +  ++  ++    Y                G+VTG ++G+ 
Sbjct: 89  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKEFSMNYLLKCICLGLVTGMMAGSF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 149 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 196

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 197 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR--FSMIM 233



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K+  ++Y+   I    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 124 KEFSMNYLLKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 176

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 177 LVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR 228


>gi|75762229|ref|ZP_00742120.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74490279|gb|EAO53604.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 342

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 93/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A  
Sbjct: 36  IITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE- 93

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   V +  +S++    +    ++
Sbjct: 94  ------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISV 147

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R    +++    K          G+  GF+    G G G  T  ++L  
Sbjct: 148 FLFTLGVYILLRFVLQNQIVASNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLAR 207

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       ++  A +    S GW            V+   V  ++   I+ 
Sbjct: 208 GNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALMLGGIVA 257

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  ++    L +    ++  T+  
Sbjct: 258 APIAAWLVRIVPAHLLGVLVGGLIIFTNIR 287


>gi|84515899|ref|ZP_01003260.1| membrane protein [Loktanella vestfoldensis SKA53]
 gi|84510341|gb|EAQ06797.1| membrane protein [Loktanella vestfoldensis SKA53]
          Length = 305

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/278 (16%), Positives = 101/278 (36%), Gaps = 54/278 (19%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG ++ P+L       GI  +    VA+ TS   I  +S+   + H +  T++
Sbjct: 28  SGMFGVGGGFLITPLLFFI----GIPPA----VAVATSTNQIVASSISGVLAHFKRKTVD 79

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGILML--------- 142
             +    +    I + +  ++ +++         +   + +F   +G+LM          
Sbjct: 80  PVMGGVLLVGGVIGSAIGIVIFNYLRALGQVDLLVQLCYVVFLGAIGMLMFVESLRAIRR 139

Query: 143 --------------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
                                + +      +       + GM+ G L+  +GVGGG    
Sbjct: 140 SRGPSAVPQRRKHNWVHNLPFKMKFRVSGLYISVIPPIMVGMLVGILAAVMGVGGGFIMV 199

Query: 183 LLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
             M++  G        TS  +  +I        +++              V++   L++L
Sbjct: 200 PAMIYILGMPTKVVIGTS--LLQIIFVAGFTTMLHATTNQT---------VDVLLALLLL 248

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              ++   + T++   +  + L I  ++++       A
Sbjct: 249 IGGVIGAQVGTRIGVKMKAEQLRILLAIMVLIVCGKIA 286



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+   L G L+ + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 177 IMVGMLVGILAAVMGVGGGFIMVPAMIYIL-------GMPTKVVIGTSLLQIIFVAGFTT 229

Query: 87  MEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H   + T+++ +    +    I   V + +   +    L    AI  L++   +    
Sbjct: 230 MLHATTNQTVDVLLALLLLIGGVIGAQVGTRIGVKMKAEQLRILLAIMVLIVCGKIALDL 289

Query: 146 RLYCER 151
            +    
Sbjct: 290 LIMPSE 295


>gi|312959769|ref|ZP_07774285.1| membrane protein, putative [Pseudomonas fluorescens WH6]
 gi|311285935|gb|EFQ64500.1| membrane protein, putative [Pseudomonas fluorescens WH6]
          Length = 249

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 80/228 (35%), Gaps = 17/228 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G+   +   +A GT+L ++ P  +++   + +   I ++              + 
Sbjct: 29  AIPVLGVLFGLDQQIAQGTALVMVVPNVMLALWRYHQRNRIELRHALPLGLTGFTFAWLG 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMG----ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           S+    +D   +   F  F + +     + M  R+     +         + G  +G + 
Sbjct: 89  SIWAVGLDAGAMRIGFIAFLVALSTYNLVRMFTRNAPPTAQMRYSWPWLGVLGAASGSMG 148

Query: 171 GALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G  GVGG +    ++   +G +   A   S  ++       L+   +          W +
Sbjct: 149 GLFGVGGAVVATPVLTSIFGTTQVVAQGLSLALALPSTGVTLVTYAWH-----HEVDWMI 203

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G       + +    +L      K+++ + ++ L   F   +   + +
Sbjct: 204 G-------IPLAVGGLLSISWGVKVAHALPERLLRGLFCGFLVVCAVM 244



 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            + V    SG++ GLFGVGG +V  PVL+  F            VA G SL +  P++ +
Sbjct: 136 WLGVLGAASGSMGGLFGVGGAVVATPVLTSIF-------GTTQVVAQGLSLALALPSTGV 188

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + + +  H  ++  I         ++      +   + +  L   F  F ++  +++  +
Sbjct: 189 TLVTYAWHHEVDWMIGIPLAVGGLLSISWGVKVAHALPERLLRGLFCGFLVVCAVMLTFK 248


>gi|229174337|ref|ZP_04301870.1| hypothetical protein bcere0006_34300 [Bacillus cereus MM3]
 gi|228609194|gb|EEK66483.1| hypothetical protein bcere0006_34300 [Bacillus cereus MM3]
          Length = 251

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 84/212 (39%), Gaps = 24/212 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         + + + + + S +   
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVISHYREGNVVVTIGGIVGGCGALGSYIGAKLGSLIPPH 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFP-----------DNYVKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +   +  R+             +       G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFVKLIKFQNREELLLAEIKDFSKDNIMKCICLGLVTGMMAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           +   +L +L  ++L   +  K +    +  L 
Sbjct: 203 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK 234



 Score = 38.9 bits (90), Expect = 0.90,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 45/113 (39%), Gaps = 7/113 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           KD   D I   I    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 130 KDFSKDNIMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 182

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
            VI P ++   + +   G ++  +L   +    +   + +   ++  +  L  
Sbjct: 183 LVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLKL 235


>gi|329730935|gb|EGG67309.1| putative membrane protein [Staphylococcus epidermidis VCU144]
          Length = 299

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 89/259 (34%), Gaps = 24/259 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +A FL+  + G  G+G G       S      GI  ++       T       T+
Sbjct: 4   VLIFAIAGFLAQLVDGSLGMGFGA----SSSSILLTYGIAPAVV----SATVHFSEIATT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H R   ++   +        I+  + + +++ +   ++    A+F L MG  +L
Sbjct: 56  AASGTSHWRFDNVHKPTMLKLAIPGSISAFIGAGVLTFIHGDYIKPFIALFLLSMGFYIL 115

Query: 143 KR---DRLYCERKFPDNYVKYIW---GMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKA 195
            +    R +       N   +     G V GFL    G G G     L+L         A
Sbjct: 116 YQFLFKRAHEHHHHVGNLSSFKVIPQGFVAGFLDAIGGGGWGPVNTPLLLSSKKIQPRYA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T +     +   A L  I    G+          +N  AV+ +    ++  P++  L 
Sbjct: 176 IGTVSASEFFVTSSAALSFIIF-LGVTQ--------INWFAVIALSLGGMVSAPISAYLV 226

Query: 256 YMIGKKYLTIGFSMIMFTT 274
            ++    L I    ++  T
Sbjct: 227 KVLPINILAICVGGLIIFT 245


>gi|257465039|ref|ZP_05629410.1| permease [Actinobacillus minor 202]
 gi|257450699|gb|EEV24742.1| permease [Actinobacillus minor 202]
          Length = 266

 Score = 74.7 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 96/264 (36%), Gaps = 10/264 (3%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +++    L+  +S LFG+GGG++MVP+L   F          + +   TSL  + 
Sbjct: 3   LTTLLILMCCGVLTNIMSALFGIGGGVLMVPILHTLF------PEFPLQMVAATSLTTVM 56

Query: 80  PTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            T++++ +   +   ++ +K L  W   + +   +   +  +     +   F    L++ 
Sbjct: 57  GTALINLISFYKQKISVELKPLLLWSVGMIVGVQLGFELSFYFPNFLIITIFISTLLVLA 116

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVT---GFLSGALGVGGGIFTNLLMLFYGASIYKA 195
                  +   +     N       +     G        GG I   LL L       K 
Sbjct: 117 WRSFLAKKGQNQTASTANEKLKGVAVCFLGGGIAGITGIGGGSIMAPLLGLLPSIKPGKI 176

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
              S  +  +     L   +           W +G+VN   V I++  S L + ++ +L 
Sbjct: 177 AVYSNSMMLIGGLGNLYGYLSKAPPFYLEGAWQIGYVNFSVVAIVVFCSFLTSFISIRLK 236

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
             + +  +  G  +I+   +   A
Sbjct: 237 GYLPEALIQKGLGVILLVIAAYMA 260


>gi|222097136|ref|YP_002531193.1| hypothetical protein BCQ_3476 [Bacillus cereus Q1]
 gi|221241194|gb|ACM13904.1| membrane protein, putative [Bacillus cereus Q1]
          Length = 241

 Score = 74.7 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 86/219 (39%), Gaps = 27/219 (12%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         + + + S + S +   
Sbjct: 26  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGALGSYIGSKIGSLIPGH 85

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFP-----------DNYVKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +   +  R+             +       G+VTG ++G+ 
Sbjct: 86  LLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGMMAGSF 145

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L     G+             
Sbjct: 146 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLD----------- 194

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
               +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 195 --YILLQVLIGTMLGAYIGAKFTNYAPRMLLK--FSMIM 229


>gi|220929071|ref|YP_002505980.1| hypothetical protein Ccel_1649 [Clostridium cellulolyticum H10]
 gi|219999399|gb|ACL76000.1| protein of unknown function DUF81 [Clostridium cellulolyticum H10]
          Length = 277

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 86/262 (32%), Gaps = 48/262 (18%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++ P L+           I +  A+G S+  +  TS  S + + +    N+++      
Sbjct: 28  IIITPALTLLL-------GIDIKYAIGASIISVIATSSGSAVAYLKDRITNVRVAMFLEI 80

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP----------- 154
              I  +  + +   V   +L   F    L   I M K+ +    R              
Sbjct: 81  ATTIGALTGAFIAGLVSTKYLYLIFGFLLLYSAINMFKKRKQELPRDISPSPLSQKLNLS 140

Query: 155 -----------------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKAT 196
                              Y  +    V G +SG LG+G GIF  + M  F    +  +T
Sbjct: 141 GAYYDKALSETVEYNVTGVYGGFGMMYVAGVISGLLGIGSGIFKVMAMDSFMKLPMKVST 200

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           ATS  +  + A  +  + +            S G ++      +    +L   + TK+  
Sbjct: 201 ATSNFMIGVTAAASAGIYL------------SRGNIDPSIAAPVALGVLLGASVGTKVMQ 248

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            +    L + F  ++   S   
Sbjct: 249 RLKSSTLRLVFIPVLLYVSIQM 270



 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           +++G +SGL G+G G+  V  +    +L        M V+  TS  +I  T+  S   + 
Sbjct: 167 YVAGVISGLLGIGSGIFKVMAMDSFMKL-------PMKVSTATSNFMIGVTAAASAGIYL 219

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I+  I       + +   V + ++  +  S L   F    L + I M+ +
Sbjct: 220 SRGNIDPSIAAPVALGVLLGASVGTKVMQRLKSSTLRLVFIPVLLYVSIQMIVK 273


>gi|89053334|ref|YP_508785.1| hypothetical protein Jann_0843 [Jannaschia sp. CCS1]
 gi|88862883|gb|ABD53760.1| protein of unknown function DUF81 [Jannaschia sp. CCS1]
          Length = 307

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 96/280 (34%), Gaps = 56/280 (20%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG +M P+L       GI  +    VA+ T    I  +S    + H +  T++
Sbjct: 28  SGMFGVGGGFLMTPLLFFI----GIPPA----VAVATEANQIVASSFSGVLAHLKRKTVD 79

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGILML--------- 142
           +K+    +    I   +   + + +         +   + +F  ++G LM          
Sbjct: 80  LKMGLVLLIGGLIGAAIGVQVFAALTAIGQVDLLVRLCYVVFLGIIGGLMFIESLNAIRK 139

Query: 143 ----------------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
                                  + R      +       I G+  G L+  +GVGGG  
Sbjct: 140 SRRAGGVVPPKRRHRGWIHALPFKMRFRTSGLYISVIPPLIVGLFVGVLAAIMGVGGGFI 199

Query: 181 TNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
               M++  G        TS      +   A L+   + +            V++   ++
Sbjct: 200 MVPAMIYLLGMPTKVVVGTSLFQIIFVTGFATLMHATTNYT-----------VDMVLAVL 248

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           +L   ++   +  ++   +  + L I  ++++       A
Sbjct: 249 LLVGGVIGAQIGARIGTKMKAEQLRILLAIMVLAVCGKLA 288


>gi|317132465|ref|YP_004091779.1| protein of unknown function DUF81 [Ethanoligenens harbinense
           YUAN-3]
 gi|315470444|gb|ADU27048.1| protein of unknown function DUF81 [Ethanoligenens harbinense
           YUAN-3]
          Length = 257

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 95/263 (36%), Gaps = 29/263 (11%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +   +    FL G L    G GGG + V +L+  F        I   +A  TSL    PT
Sbjct: 3   HYIALPFVGFLVGLLIVSLGGGGGSIYVGILTVFFH-------IPPAIAASTSLATTIPT 55

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + +    H + G +  +     +    I  +  SL  S + ++  N+   I  +L+ + M
Sbjct: 56  TAVGTFSHWKAGNVRFRFGLTMLAGGVIGAIAGSLCSSLLPQNLYNRLTGIILVLLAVQM 115

Query: 142 LK----------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
           L                 +R   +      +G++ G +SG +G+ GG      ++  G  
Sbjct: 116 LIAFLRKRHKKAEVEKERQRNTSNMVKAIGFGLLGGVMSGMVGLSGGGPIVAGLMLLGCQ 175

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
             +   TS  V   IA       +            S+G ++ G V ++   ++    + 
Sbjct: 176 ALETVGTSVLVLLGIAVTGFAAHL------------SMGNIDWGLVGLLASGTVCGAFVG 223

Query: 252 TKLSYMIGKKYLTIGFSMIMFTT 274
             L   I KK L      ++F  
Sbjct: 224 PLLLKRINKKKLEKVLQPVLFLM 246



 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 8/115 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I    L G +SG+ G+ GG  +V  L                  +GTS+ V+   +V  F
Sbjct: 144 IGFGLLGGVMSGMVGLSGGGPIVAGLMLL--------GCQALETVGTSVLVLLGIAVTGF 195

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             H   G I+  ++            V  L++  ++K  L K       LM   M
Sbjct: 196 AAHLSMGNIDWGLVGLLASGTVCGAFVGPLLLKRINKKKLEKVLQPVLFLMVAGM 250


>gi|123441619|ref|YP_001005604.1| hypothetical protein YE1283 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088580|emb|CAL11375.1| putative membrane protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 268

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 98/234 (41%), Gaps = 25/234 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ + + L+G +  + G GGGL+ VP L       G+  +      + T+       S  
Sbjct: 13  ILFLVALLAGFIDSIAG-GGGLLTVPALLAV----GLPPAQV----LATNKLQSVGGSFS 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +   R G +N+K  K  I +  + +++ ++++ H+    L +   +  + +G+  L  
Sbjct: 64  ASLYFIRRGAVNLKEQKLTIALTVVGSMLGAILVQHMRADILRQILPLLVIGIGVYFLVT 123

Query: 145 DRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSA 200
            +L     +R+        I G   GF  G  G G G F  L  +   G ++ K+TA + 
Sbjct: 124 PKLGEVDQQRRLSALPFALIAGGGVGFYDGFFGPGAGSFYALAFVTLCGFNLAKSTAHAK 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            ++      +L+  I  G  +     WS+G       L++L   +L   L   +
Sbjct: 184 VLNFTSNLGSLIFFIVGGKVV-----WSIG-------LVMLVGQVLGARLGAHM 225


>gi|146278323|ref|YP_001168482.1| hypothetical protein Rsph17025_2287 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556564|gb|ABP71177.1| protein of unknown function DUF81 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 306

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 99/285 (34%), Gaps = 55/285 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    V   I L++    + G +SG+FGVGGG ++ P+L       GI  +    V
Sbjct: 1   MQLYLPIAEVSVNIFLLLGLGGIVGFMSGMFGVGGGFLITPLLFFI----GIPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    +  +SV   +   +   ++ ++    +      +     + + ++       
Sbjct: 53  AVATGANQVVASSVSGVLAQIKRKAVDFRMGMVLLAGGVAGSAFGVAVFARLNTLGQVDL 112

Query: 125 FLNKAFAIFCLLMGILML------------------------------KRDRLYCERKFP 154
           F+  ++ +F  L+G LML                               + +      + 
Sbjct: 113 FVQLSYVLFLGLVGALMLQESIRALRRARRTDAPVRRSRQHGWAHKMPLKMKFRASGLYI 172

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLV 213
                 + G   GFL+  +GVGGG      M++  G        TS      +     ++
Sbjct: 173 SVIPPLLVGAFVGFLAAIMGVGGGFIMVPAMIYLLGMPTKIVIGTSLFQIIFVTAFTTVM 232

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
              +              V++   L+++   ++   +  ++   +
Sbjct: 233 HAVTSQT-----------VDMALALLLILGGVIGAQVGARIGVRL 266


>gi|229156646|ref|ZP_04284734.1| hypothetical protein bcere0010_28310 [Bacillus cereus ATCC 4342]
 gi|228626815|gb|EEK83554.1| hypothetical protein bcere0010_28310 [Bacillus cereus ATCC 4342]
          Length = 342

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 93/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A  
Sbjct: 36  TITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE- 93

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   + +  +S++    +    +I
Sbjct: 94  ------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFIGACFLSNLPGDVIKPYISI 147

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R     ++   +K          G+  GF+    G G G  T  ++L  
Sbjct: 148 FLFTLGVYILLRFIIQKQVVTSKKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLAR 207

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       ++  A +    S GW            V+   V  ++   I+ 
Sbjct: 208 GNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFSLMLGGIVA 257

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  ++    L +    ++  T+  
Sbjct: 258 APIAAWLVRIVPSHLLGVLVGGLIIFTNIR 287


>gi|255281296|ref|ZP_05345851.1| putative integral membrane protein [Bryantella formatexigens DSM
           14469]
 gi|255268253|gb|EET61458.1| putative integral membrane protein [Bryantella formatexigens DSM
           14469]
          Length = 256

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 104/267 (38%), Gaps = 25/267 (9%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++  I +   A   +G  +G  G+    V+ P+L      +G+D     ++A+G +L  
Sbjct: 2   ELLTTIIVTFFAGMGAGLGTGFAGMSAAAVISPMLI---TFLGMDS----YMAVGIALSS 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
               S +S   + ++  +++K     +  + I TVV S + S V  + +        LL+
Sbjct: 55  DVLASAVSAYTYGKNKNLDIKNGLIMMVSVLIFTVVGSYVASLVPPATMGNFSVFMTLLL 114

Query: 138 GILMLKRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGA 190
           GI  + +  +  +                I G++ GF+ G +G GGG+   L++    G 
Sbjct: 115 GIKFIVKPVMTTKEAMQNVSARKRAVQSIICGILIGFICGFIGAGGGMMMLLILTTVLGY 174

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            +  A  TS  +    A    +     G    G P W++        ++ +  ++L   +
Sbjct: 175 ELKTAVGTSVFIMTFTALTGAVSHFTIG----GAPDWTV-------WILCVVFTLLWARI 223

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           A   +     K L     +++     V
Sbjct: 224 AAVFANKAEPKTLNRATGIVLVILGAV 250



 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 59/136 (43%), Gaps = 12/136 (8%)

Query: 9   SLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMH 68
           ++    ++   V  I   I+  F+ G +    G GGG++M+ +L+             + 
Sbjct: 129 AMQNVSARKRAVQSIICGILIGFICGFI----GAGGGMMMLLILTTVL-------GYELK 177

Query: 69  VAMGTSLGVIAPTSVMSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            A+GTS+ ++  T++   + H    G  +  +    +    +   + ++  +  +   LN
Sbjct: 178 TAVGTSVFIMTFTALTGAVSHFTIGGAPDWTVWILCVVFTLLWARIAAVFANKAEPKTLN 237

Query: 128 KAFAIFCLLMGILMLK 143
           +A  I  +++G ++L 
Sbjct: 238 RATGIVLVILGAVILL 253


>gi|152976051|ref|YP_001375568.1| hypothetical protein Bcer98_2327 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152024803|gb|ABS22573.1| protein of unknown function DUF81 [Bacillus cytotoxicus NVH 391-98]
          Length = 249

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 89/215 (41%), Gaps = 22/215 (10%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           + +H+A+ TSL  +A T++   + H R G +++KI         I + V S   + +   
Sbjct: 35  VPVHIALATSLTAMAFTTLSGVVSHYREGNVSLKIGGVVGIFGAIGSYVGSQFGAVIPAQ 94

Query: 125 FLNKAFAIFCLLMGILMLKR-------DRLYCERKFPDNYV--KYIWGMVTGFLSGALGV 175
            L+   A    L  I M  R        ++  E+      +    + G+VTG L+GA G+
Sbjct: 95  LLHWFTASMLFLSAICMCIRLLYFHNQSKMNHEKGLSITILVKSMLLGLVTGSLAGAFGI 154

Query: 176 GGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           G   F  L LM+  G +I ++  T+  +   IA    +               S G++N 
Sbjct: 155 GSAPFIQLGLMVLLGLTIQQSVGTTMLIILPIAIGGGIGYS------------SAGYLNY 202

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             ++ +L  ++L   L  K +    +  L +   +
Sbjct: 203 VLLVQVLIGTMLGAYLGAKFTNFAPRIVLKLSMII 237


>gi|313498089|gb|ADR59455.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 259

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 97/261 (37%), Gaps = 25/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++ + +F++G +  + G GGGL+  P L  A    G+      H+ +GT+       S
Sbjct: 12  LLILALVAFVAGFIDAIAG-GGGLLTTPALLTA----GMPP----HLVLGTNKLSSTFGS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + +    +    +  +F      ++ +++  ++   +LNK   +     GI +L
Sbjct: 63  ATAGFTYYKRKLFHPAQWRPALFATLTGALLGAVIAHYMPAEWLNKMLPVIVFACGIYLL 122

Query: 143 KRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATAT 198
                              +   G   GF  G  G G G F T   +L Y   + +A+  
Sbjct: 123 FGGTPKAPLDADAPIKKKWQVPQGFTLGFYDGVAGPGTGAFWTVSTLLLYPIDLVRASGV 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++ +    AL V I SG        + +G       L +    ++      + +   
Sbjct: 183 ARSMNFVSNIAALTVFIISGQ-----VDYIVG-------LCMGLSVMVGAFFGARTAISG 230

Query: 259 GKKYLTIGFSMIMFTTSFVFA 279
           G K++   F  ++   +   A
Sbjct: 231 GSKFIRPVFITVVLALTVRLA 251


>gi|154250913|ref|YP_001411737.1| hypothetical protein Plav_0457 [Parvibaculum lavamentivorans DS-1]
 gi|154154863|gb|ABS62080.1| protein of unknown function DUF81 [Parvibaculum lavamentivorans
           DS-1]
          Length = 307

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/289 (16%), Positives = 99/289 (34%), Gaps = 55/289 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   I  I+      G LSG+FG+GGG +M P+L       GI  +    V
Sbjct: 1   MQIYLPIAELPVSILTILAMGATVGFLSGMFGIGGGFLMTPLLIFL----GIPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS----- 124
           A+GT    +  +SV   + H    +I+ K+    +    + +V    +   + +      
Sbjct: 53  AVGTQTTQVVASSVTGALAHFTRKSIDFKMGGVLLIGGIVGSVSGIYLFKLLTEVGQIDL 112

Query: 125 FLNKAFAIFCLLMGILML------------------------------KRDRLYCERKFP 154
            ++ A+ +   ++G++M+                               + R    + + 
Sbjct: 113 TISIAYVLLLSIIGVMMMVESVRAIRAARGGAQPARRGGHHSWIHGLPFKVRFRRSKLYI 172

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLV 213
                 + G   G LS  +GVGGG      M++           TS      I F A L 
Sbjct: 173 SVIPPILVGFFVGTLSALMGVGGGFIMIPAMIYLLRMPTNVVIGTS---FFQIVFVAALT 229

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
            +                V+I    +++   ++      + +  +  + 
Sbjct: 230 GVMHATENQA--------VDIVLGFLLVIGGVIGAQYGVRAAEKLPAEQ 270


>gi|86141473|ref|ZP_01060019.1| membrane protein, putative [Leeuwenhoekiella blandensis MED217]
 gi|295133642|ref|YP_003584318.1| hypothetical protein ZPR_1792 [Zunongwangia profunda SM-A87]
 gi|85832032|gb|EAQ50487.1| membrane protein, putative [Leeuwenhoekiella blandensis MED217]
 gi|294981657|gb|ADF52122.1| membrane protein, putative [Zunongwangia profunda SM-A87]
          Length = 267

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 7/122 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ V     G ++G+ G GGG +++P L            + M  A+ TSL +IA  S+
Sbjct: 150 LLLSVQGLFIGVVTGMVGAGGGFLIIPALVLL-------AKLPMKKAVATSLFIIAINSL 202

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + F+   ++  I+   L  +  +  +   +   +   +D   L KAF  F L+MG+ ++ 
Sbjct: 203 IGFLGDVQNLDIDWPFLLIFTGISIVGIFIGIWLNKFIDGKKLKKAFGWFVLIMGVYIIY 262

Query: 144 RD 145
           ++
Sbjct: 263 KE 264



 Score = 69.3 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 91/250 (36%), Gaps = 38/250 (15%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP+L  A  L  I       +A   SL V+  TS++  +++ + G ++ K    +   
Sbjct: 29  LTVPILVYALSLNPI-------IATAYSLFVVGTTSLVGAIKNMKKGKVDFKTALIFAVP 81

Query: 107 LPITTVVT-SLMISHVDKSF-------------LNKAFAIFCLLMGILMLKRDRLYCERK 152
                 +T + +I  + +               +   FAI  LL  I M++        +
Sbjct: 82  AFTAVYLTRAYLIPVIPEQLFDVKNFMVTKNLAIMLFFAIVMLLASITMIRNGNRQFNSE 141

Query: 153 FPDNYVKYIW----GMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIA 207
             +    Y+     G+  G ++G +G GGG      ++      + KA ATS  + A+ +
Sbjct: 142 VIEKKSNYLLLSVQGLFIGVVTGMVGAGGGFLIIPALVLLAKLPMKKAVATSLFIIAINS 201

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
               L        +  L       ++   +LI   ISI+   +   L+  I  K L   F
Sbjct: 202 LIGFLG------DVQNLD------IDWPFLLIFTGISIVGIFIGIWLNKFIDGKKLKKAF 249

Query: 268 SMIMFTTSFV 277
              +      
Sbjct: 250 GWFVLIMGVY 259


>gi|229133955|ref|ZP_04262777.1| hypothetical protein bcere0014_28710 [Bacillus cereus BDRD-ST196]
 gi|228649515|gb|EEL05528.1| hypothetical protein bcere0014_28710 [Bacillus cereus BDRD-ST196]
          Length = 342

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
             S    ++    +  + +  +  F +  + G  G+  G+     L   F +     S  
Sbjct: 30  KVSFSFIITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASAS 88

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +H+A          T+  S   H + G ++   +        I   + +  +S++    +
Sbjct: 89  VHLAE-------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFIGACFLSNLPGDVI 141

Query: 127 NKAFAIFCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
               +IF   +G+ +L R     ++    K          G+  GF+    G G G  T 
Sbjct: 142 KPYISIFLFTLGVYILLRFIIQKQIVSSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITT 201

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIIL 241
            ++L  G    K   +       ++  A +    S GW            V+   V  ++
Sbjct: 202 PVLLARGNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALM 251

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              I+  P+A  L  ++    L +    ++  T+  
Sbjct: 252 LGGIVAAPIAAWLVRIVPSHLLGVLVGGLIIFTNIR 287


>gi|229012325|ref|ZP_04169502.1| hypothetical protein bmyco0001_27700 [Bacillus mycoides DSM 2048]
 gi|229167783|ref|ZP_04295516.1| hypothetical protein bcere0007_27440 [Bacillus cereus AH621]
 gi|228615739|gb|EEK72831.1| hypothetical protein bcere0007_27440 [Bacillus cereus AH621]
 gi|228748961|gb|EEL98809.1| hypothetical protein bmyco0001_27700 [Bacillus mycoides DSM 2048]
          Length = 336

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
             S    ++    +  + +  +  F +  + G  G+  G+     L   F +     S  
Sbjct: 24  KVSFSFIITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASAS 82

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +H+A          T+  S   H + G ++   +        I   + +  +S++    +
Sbjct: 83  VHLAE-------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFIGACFLSNLPGDVI 135

Query: 127 NKAFAIFCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
               +IF   +G+ +L R     ++    K          G+  GF+    G G G  T 
Sbjct: 136 KPYISIFLFTLGVYILLRFIIQKQIVSSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITT 195

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIIL 241
            ++L  G    K   +       ++  A +    S GW            V+   V  ++
Sbjct: 196 PVLLARGNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALM 245

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              I+  P+A  L  ++    L +    ++  T+  
Sbjct: 246 LGGIVAAPIAAWLVRIVPSHLLGVLVGGLIIFTNIR 281


>gi|291455626|ref|ZP_06595016.1| Dub81-like protein [Bifidobacterium breve DSM 20213]
 gi|291382554|gb|EFE90072.1| Dub81-like protein [Bifidobacterium breve DSM 20213]
          Length = 267

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 93/242 (38%), Gaps = 24/242 (9%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
           FG+GGG ++VP L            +    A  TS+  I PTSV   + +  +G ++   
Sbjct: 35  FGIGGGTIIVPALVWL--------GLTQRHAAATSMLAIIPTSVSGVLSYAVNGNVDWIA 86

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK---RDRLYCERKFPDN 156
                  + +   + SL++S + +  L  AF +F   + +  L          E      
Sbjct: 87  ALLVFIGMFVGGQIGSLLLSRLSEVVLRWAFVVFMAFVILSQLIFVPSRDSSIELNLVTG 146

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRI 215
            +  ++G++ G L+G LGVGGG      + + + AS   A  TS       A    +  +
Sbjct: 147 LLMVVFGVIAGILAGLLGVGGGAILVPSLSILFDASDLIARGTSLLAMFPNAVTTTVANV 206

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                   +    +G       LII  ++ L  PL T ++  +  +   I F+  +    
Sbjct: 207 -----RRRMVHAKVG-------LIIGIVAALTAPLGTWIAEAMTPRTGEILFATYLTVLL 254

Query: 276 FV 277
             
Sbjct: 255 IR 256


>gi|126461650|ref|YP_001042764.1| hypothetical protein Rsph17029_0881 [Rhodobacter sphaeroides ATCC
           17029]
 gi|221638621|ref|YP_002524883.1| hypothetical protein RSKD131_0522 [Rhodobacter sphaeroides KD131]
 gi|332557643|ref|ZP_08411965.1| hypothetical protein RSWS8N_01290 [Rhodobacter sphaeroides WS8N]
 gi|126103314|gb|ABN75992.1| protein of unknown function DUF81 [Rhodobacter sphaeroides ATCC
           17029]
 gi|221159402|gb|ACM00382.1| Hypothetical Protein RSKD131_0522 [Rhodobacter sphaeroides KD131]
 gi|332275355|gb|EGJ20670.1| hypothetical protein RSWS8N_01290 [Rhodobacter sphaeroides WS8N]
          Length = 306

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 99/285 (34%), Gaps = 55/285 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    V   I L++    + G +SG+FGVGGG ++ P+L       GI  +    V
Sbjct: 1   MQLYLPIAEVSVNIFLLLGLGGIVGFMSGMFGVGGGFLITPLLFFI----GIPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    +  +SV   +   +  T++ ++    +      +     + + ++       
Sbjct: 53  AVATGANQVVASSVSGVLAQLKRKTVDFRMGLVLLAGGVAGSAFGVAVFARLNTLGQVDL 112

Query: 125 FLNKAFAIFCLLMGILML------------------------------KRDRLYCERKFP 154
           F+  ++ +F  L+G LML                               + +      + 
Sbjct: 113 FVQLSYVLFLGLVGALMLQESVRALRRARRPDAPVKRARQHGWAHKMPFKMKFRASGLYI 172

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLV 213
                 + G   GFL+  +GVGGG      M++  G        TS      +     ++
Sbjct: 173 SVIPPLMVGAFVGFLAAIMGVGGGFIMVPAMIYLLGMPTKIVIGTSLFQIIFVTAFTTVM 232

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
              +   ++    +           +++   ++   +  ++   +
Sbjct: 233 HAVTSQTVDMALAF-----------LLIVGGVVGAQIGARIGVRL 266


>gi|77460215|ref|YP_349722.1| hypothetical protein Pfl01_3994 [Pseudomonas fluorescens Pf0-1]
 gi|77384218|gb|ABA75731.1| putative membrane protein [Pseudomonas fluorescens Pf0-1]
          Length = 249

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 77/228 (33%), Gaps = 17/228 (7%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            L+G+   +   +A GT+L ++ P  +++   + +   I ++       +      + S+
Sbjct: 31  PLLGVWFGLDQQIAQGTALVMVVPNVMLALWRYHQRNRIELRHALPLAVMGFCFAWIGSI 90

Query: 117 MISHVDKSFLNKAFAIFCLLMG----ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGA 172
               +D   +   F  F + +     + M                   + G  +G + G 
Sbjct: 91  WAVGIDAQTMRIGFVAFLVALSAYNLVRMFGARPAATSEMRYSWPWLGVLGAASGAMGGL 150

Query: 173 LGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF 231
            GVGG +    ++   +G +   A   S  ++               + ++    W +G 
Sbjct: 151 FGVGGAVVATPVLTSLFGTTQVVAQGLSLALALP-----STGVTLVTYAVHHEVDWMIG- 204

Query: 232 VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                 L +    +       K+++ + +K L   F   +   + + A
Sbjct: 205 ------LPLAIGGLASISWGVKVAHAMPEKLLRGLFCGFLVLCAVMLA 246



 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            + V    SG + GLFGVGG +V  PVL+  F            VA G SL +  P++ +
Sbjct: 136 WLGVLGAASGAMGGLFGVGGAVVATPVLTSLF-------GTTQVVAQGLSLALALPSTGV 188

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + + +  H  ++  I          +      +   + +  L   F  F +L  +++  +
Sbjct: 189 TLVTYAVHHEVDWMIGLPLAIGGLASISWGVKVAHAMPEKLLRGLFCGFLVLCAVMLAFK 248


>gi|229030735|ref|ZP_04186763.1| hypothetical protein bcere0028_28010 [Bacillus cereus AH1271]
 gi|228730583|gb|EEL81535.1| hypothetical protein bcere0028_28010 [Bacillus cereus AH1271]
          Length = 336

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
             S    ++    +  + +  +  F +  + G  G+  G+     L   F +     S  
Sbjct: 24  KVSFSFIITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASAS 82

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +H+A          T+  S   H + G ++   +        I   + +  +S++    +
Sbjct: 83  VHLAE-------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFIGACFLSNLPGDVI 135

Query: 127 NKAFAIFCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
               +IF   +G+ +L R     ++    K          G+  GF+    G G G  T 
Sbjct: 136 KPYISIFLFTLGVYILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITT 195

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIIL 241
            ++L  G    K   +       ++  A +    S GW            V+   V  ++
Sbjct: 196 PVLLARGNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFSLM 245

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              I+  P+A  L  ++    L +    ++  T+  
Sbjct: 246 LGGIVAAPIAAWLVRIVPSHLLGVLVGGLIIFTNIR 281


>gi|332162445|ref|YP_004299022.1| hypothetical protein YE105_C2823 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318606533|emb|CBY28031.1| putative membrane protein YfcA [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325666675|gb|ADZ43319.1| hypothetical protein YE105_C2823 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330861263|emb|CBX71511.1| UPF0721 transmembrane protein yfcA [Yersinia enterocolitica W22703]
          Length = 268

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 98/234 (41%), Gaps = 25/234 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ + + L+G +  + G GGGL+ VP L       G+  +      + T+       S  
Sbjct: 13  ILFLVALLAGFIDSIAG-GGGLLTVPALLAV----GLPPAQV----LATNKLQSVGGSFS 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +   R G +N+K  K  I +  + +++ ++++ H+    L +   +  + +G+  L  
Sbjct: 64  ASLYFIRRGAVNLKEQKLTIALTVVGSMLGAILVQHMRADILRQILPLLVIGIGVYFLVT 123

Query: 145 DRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSA 200
            +L     +R+        I G   GF  G  G G G F  L  +   G ++ K+TA + 
Sbjct: 124 PKLGEVDQQRRLSALPFALIAGGGVGFYDGFFGPGAGSFYALAFVTLCGFNLAKSTAHAK 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            ++      +L+  I  G  +     WS+G       L++L   +L   L   +
Sbjct: 184 VLNFTSNLGSLIFFIVGGKVV-----WSIG-------LVMLVGQVLGARLGAHM 225


>gi|293395107|ref|ZP_06639393.1| inner membrane protein YfcA [Serratia odorifera DSM 4582]
 gi|291422284|gb|EFE95527.1| inner membrane protein YfcA [Serratia odorifera DSM 4582]
          Length = 266

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 102/261 (39%), Gaps = 25/261 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +  +   + L+G +  + G GGGL+ VPVL       G+  +     A+ T+      
Sbjct: 9   EMLGALFAVALLAGFIDSIAG-GGGLLTVPVLLAV----GVPPAE----ALATNKLQSVG 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R   +N+   K  I +  + ++  ++++ H+    L +   +  + +G+ 
Sbjct: 60  GSFSASLYFIRRKAVNLNDQKLTILLTLLGSIAGAILVQHMRADLLRQMLPLLVIGIGLY 119

Query: 141 MLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L   RL     +R+        + G   GF  G  G G G F  L  +   G ++ K+T
Sbjct: 120 FLLTPRLGESDRQRRLSALPFGLVAGGCVGFYDGFFGPGAGSFYALAYVTLCGFNLAKST 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++    F +L+  I  G             V  G  L++L   +L   +   +  
Sbjct: 180 AHAKVLNFTSNFGSLIFFIMGGK------------VLWGIGLVMLVGQVLGARIGAHMVL 227

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G+K +     ++    S  
Sbjct: 228 TRGQKLIRPMIVIVSLIMSLK 248


>gi|260425701|ref|ZP_05779681.1| putative membrane protein [Citreicella sp. SE45]
 gi|260423641|gb|EEX16891.1| putative membrane protein [Citreicella sp. SE45]
          Length = 303

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 93/275 (33%), Gaps = 53/275 (19%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           +FGVGGG ++ P+L      MGI  +    VA+ T    I  +SV   + H +  T++++
Sbjct: 30  MFGVGGGFLITPLLFF----MGIPPA----VAVATGANQIVASSVSGVLAHLKRRTVDLR 81

Query: 99  ILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGILML----------- 142
           +    +    +   +   + + + +       +   + +F  ++G LM            
Sbjct: 82  MGTVLLCGGLVGAALGIWIFNLLKQLGQVDLLVRLCYVVFLGIIGGLMFIESLNALRRSK 141

Query: 143 -----------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
                             + R      +       + G+  G LS  +GVGGG      M
Sbjct: 142 KGAVPKRRHHGWVHGLPFKMRFRTSGLYISAIPPLLVGVSVGVLSAIMGVGGGFIMVPAM 201

Query: 186 LF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           ++  G        TS      +     +    +   ++ L             L++L   
Sbjct: 202 IYLLGMPTKVVVGTSLFQIIFVTAFTTMAHAITSQTVDVL-----------LALVLLIGG 250

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           ++     T +   +  + L I  + ++    F  A
Sbjct: 251 VIGAQFGTAIGTRLKAEQLRIALASLVLLVCFKLA 285



 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G LS + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 176 LLVGVSVGVLSAIMGVGGGFIMVPAMIYLL-------GMPTKVVVGTSLFQIIFVTAFTT 228

Query: 87  MEHR-RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H     T+++ +    +    I     + + + +    L  A A   LL+   +    
Sbjct: 229 MAHAITSQTVDVLLALVLLIGGVIGAQFGTAIGTRLKAEQLRIALASLVLLVCFKLALDL 288

Query: 146 RLYCER 151
            L    
Sbjct: 289 FLTPAD 294


>gi|229080934|ref|ZP_04213448.1| hypothetical protein bcere0023_35750 [Bacillus cereus Rock4-2]
 gi|228702351|gb|EEL54823.1| hypothetical protein bcere0023_35750 [Bacillus cereus Rock4-2]
          Length = 258

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G +   I         I + + S   S +   
Sbjct: 42  IPIHVALATSLTAMAFTTLSGVVSHYREGNVAFIIGGIVGGFGAIGSYIGSKFGSLIPAH 101

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +  ++  ++    Y                G+VTG ++G+ 
Sbjct: 102 LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKEFSMNYLLKCICLGLVTGMMAGSF 161

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+    +I ++  T+  V   IA    L               S G++
Sbjct: 162 GIGSAPFIQLGLMVLLRLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 209

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 210 DYILLLQVLIGTMLGAYIGAKFTNYAPRTLLR--FSMIM 246



 Score = 42.4 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 49/112 (43%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K+  ++Y+   I    ++G ++G FG+G    +   L    +L        +  ++GT++
Sbjct: 137 KEFSMNYLLKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLLRL-------TIQQSVGTTM 189

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  ++ L 
Sbjct: 190 LVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRTLLR 241


>gi|206968864|ref|ZP_03229819.1| permease [Bacillus cereus AH1134]
 gi|206735905|gb|EDZ53063.1| permease [Bacillus cereus AH1134]
 gi|326941388|gb|AEA17284.1| hypothetical protein CT43_CH3618 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 251

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         I + + S   S +   
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +  ++  ++    Y                G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIMFQNKEKSSLYKHKEFSVNYLLKCVCLGLVTGMMAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    +               S G++
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGIGYS------------SEGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 203 DYILLLQVLIGTMLGAYIGAKFTNYAPRTLLR--FSMIM 239



 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K+  V+Y+   +    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 130 KEFSVNYLLKCVCLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 182

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  ++ L 
Sbjct: 183 LVILPIAIGGGIGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRTLLR 234


>gi|229060725|ref|ZP_04198081.1| hypothetical protein bcere0026_28200 [Bacillus cereus AH603]
 gi|228718596|gb|EEL70226.1| hypothetical protein bcere0026_28200 [Bacillus cereus AH603]
          Length = 339

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 23/276 (8%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
             S    ++    +  + +  +  F +  + G  G+  G+     L   F +     S  
Sbjct: 27  KVSFSFIITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASAS 85

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +H+A          T+  S   H + G ++   +        I   + +  +S++    +
Sbjct: 86  VHLAE-------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFIGACFLSNLPGDVI 138

Query: 127 NKAFAIFCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
               +IF   +G+ +L R     ++    K          G+  GF+    G G G  T 
Sbjct: 139 KPYISIFLFTLGVYILLRFIIQKQIVSSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITT 198

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIIL 241
            ++L  G    K   +       ++  A +    S GW            V+   V  ++
Sbjct: 199 PVLLARGNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFSLM 248

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              I+  P+A  L  ++    L +    ++  T+  
Sbjct: 249 LGGIVAAPIAAWLVRIVPSHLLGVLVGGLIIFTNIR 284


>gi|229191760|ref|ZP_04318736.1| hypothetical protein bcere0002_34190 [Bacillus cereus ATCC 10876]
 gi|228591699|gb|EEK49542.1| hypothetical protein bcere0002_34190 [Bacillus cereus ATCC 10876]
          Length = 251

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G +   I         I + + S   S +   
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVVSHYREGNVAFIIGGIVGGFGAIGSYIGSKFGSLIPAH 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +  ++  ++    Y                G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKEFSMNYLLKCICLGLVTGMMAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+ +G +I ++  T+  V   IA    L               S G++
Sbjct: 155 GIGSAPFIQLGLMVLFGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 203 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR--FSMIM 239



 Score = 42.4 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K+  ++Y+   I    ++G ++G FG+G    +   L   F        + +  ++GT++
Sbjct: 130 KEFSMNYLLKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLF-------GLTIQQSVGTTM 182

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 183 LVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR 234


>gi|251811706|ref|ZP_04826179.1| protein of hypothetical function DUF81 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876847|ref|ZP_06285703.1| putative membrane protein [Staphylococcus epidermidis SK135]
 gi|293367297|ref|ZP_06613964.1| conserved membrane protein YtnM [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|251804786|gb|EES57443.1| protein of hypothetical function DUF81 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294498|gb|EFA87036.1| putative membrane protein [Staphylococcus epidermidis SK135]
 gi|291318586|gb|EFE58965.1| conserved membrane protein YtnM [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329733479|gb|EGG69810.1| putative membrane protein [Staphylococcus epidermidis VCU045]
 gi|329737664|gb|EGG73909.1| putative membrane protein [Staphylococcus epidermidis VCU028]
          Length = 299

 Score = 74.3 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 89/259 (34%), Gaps = 24/259 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +A FL+  + G  G+G G       S      GI  ++       T       T+
Sbjct: 4   VLIFAIAGFLAQLVDGSLGMGFGA----SSSSILLTYGIAPAVV----SATVHFSEIATT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H R   ++   +        I+  + + +++ +   ++    A+F L MG  +L
Sbjct: 56  AASGTSHWRFDNVHKPTMLKLAIPGSISAFIGAGVLTFIHGDYIKPFIALFLLSMGFYIL 115

Query: 143 KR---DRLYCERKFPDNYVKYIW---GMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKA 195
            +    R +       N   +     G V GFL    G G G     L+L         A
Sbjct: 116 YQFLFKRAHEHHHHVGNLSSFKVIPQGFVAGFLDAIGGGGWGPVNTPLLLSSKKIQPRYA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T +     +   A L  I    G+          +N  AV+ +    ++  P++  L 
Sbjct: 176 IGTVSASEFFVTSSAALSFIIF-LGVTQ--------INWFAVIALSLGGMVAAPISAYLV 226

Query: 256 YMIGKKYLTIGFSMIMFTT 274
            ++    L I    ++  T
Sbjct: 227 KVLPINILAICVGGLIIFT 245


>gi|323358863|ref|YP_004225259.1| permease [Microbacterium testaceum StLB037]
 gi|323275234|dbj|BAJ75379.1| predicted permease [Microbacterium testaceum StLB037]
          Length = 268

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 56/264 (21%), Positives = 100/264 (37%), Gaps = 23/264 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V +  + I    L+G +SGLFGVGGG       +    L+ +        A GTSL  I 
Sbjct: 14  VRFFAVCIGVGLLAGLMSGLFGVGGG-------TVIVPLLVLLLGFDQRFAAGTSLAAIV 66

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           PT+ +  + +   G +             +   + + ++  + ++ L  AF  F L + +
Sbjct: 67  PTATVGVITYAVDGHVAWIPALILAAGAVLGAQIGTWLLPKLSQTALRWAFVAFLLAVIV 126

Query: 140 LMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
            +              +       + G+VTG L+G LGVGGGI     L+L +G S   A
Sbjct: 127 SLYFVIPSRDAELVLTWVTGPGLALLGVVTGILAGLLGVGGGIIVVPALLLLFGTSDLIA 186

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TS  +    A    +  +                V++ A   +   +   T L  +++
Sbjct: 187 KGTSLLMMIPTAISGTVGNLRRS------------NVDLTAAACVGLAACATTALGAQIA 234

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
             +      + FS+ +   +   A
Sbjct: 235 KAVDPFVANVLFSIFLVFIASQIA 258



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 41/128 (32%), Gaps = 13/128 (10%)

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVGGGI-FTNLLMLFYGASIYKATATSAGVSALI 206
              R      V    G++ G +SG  GVGGG     LL+L  G     A  TS       
Sbjct: 9   RPPRSVRFFAVCIGVGLLAGLMSGLFGVGGGTVIVPLLVLLLGFDQRFAAGTSLAAIVPT 68

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           A   ++                 G V     LI+   ++L   + T L   + +  L   
Sbjct: 69  ATVGVITYAVD------------GHVAWIPALILAAGAVLGAQIGTWLLPKLSQTALRWA 116

Query: 267 FSMIMFTT 274
           F   +   
Sbjct: 117 FVAFLLAV 124



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 7/95 (7%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L   F    +       +A GTSL ++ PT++   + + R   +++            
Sbjct: 173 PALLLLFGTSDL-------IAKGTSLLMMIPTAISGTVGNLRRSNVDLTAAACVGLAACA 225

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           TT + + +   VD    N  F+IF + +   +  +
Sbjct: 226 TTALGAQIAKAVDPFVANVLFSIFLVFIASQIAIK 260


>gi|254467336|ref|ZP_05080747.1| permease [Rhodobacterales bacterium Y4I]
 gi|206688244|gb|EDZ48726.1| permease [Rhodobacterales bacterium Y4I]
          Length = 285

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 99/282 (35%), Gaps = 56/282 (19%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
            G LSG+FGVGGG +M P+L       GI  +    VA+ T    I  +S    + H R 
Sbjct: 2   VGVLSGMFGVGGGFLMTPLLFFI----GIPPA----VAVATEANQIVASSFSGVLAHFRR 53

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGILML----- 142
            T+++K+         +   +  ++ +++         +   + +F  ++G LM      
Sbjct: 54  RTVDIKMGLVLQAGGLMGAALGVVVFNYLKALGQVDLLVKLCYVVFLGVVGGLMFIESLN 113

Query: 143 --------------------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
                                      + R      +       + G+  G L+  +GVG
Sbjct: 114 AIRKAKKAGGAAPAPRRQRGWVHALPFKMRFRTSGLYISVIPPLLVGVCVGILAAIMGVG 173

Query: 177 GGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           GG      M++  G        TS     L+     ++   + +            V+I 
Sbjct: 174 GGFIMVPAMIYILGMPTKVVVGTSLFQIILVTGFTTMLHATTNYT-----------VDIV 222

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             +++L   ++   + T++   +  + L I  ++++      
Sbjct: 223 LAVLLLIGGVIGAQIGTRIGVYLKAEQLRILLALMVIAVCVK 264



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G L+ + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 157 LLVGVCVGILAAIMGVGGGFIMVPAMIYIL-------GMPTKVVVGTSLFQIILVTGFTT 209

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H     T+++ +    +    I   + + +  ++    L    A+  + + + +    
Sbjct: 210 MLHATTNYTVDIVLAVLLLIGGVIGAQIGTRIGVYLKAEQLRILLALMVIAVCVKLGLDL 269

Query: 146 RLYCER 151
            L    
Sbjct: 270 LLQPSE 275


>gi|228908821|ref|ZP_04072653.1| hypothetical protein bthur0013_29780 [Bacillus thuringiensis IBL
           200]
 gi|228850831|gb|EEM95653.1| hypothetical protein bthur0013_29780 [Bacillus thuringiensis IBL
           200]
          Length = 336

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 93/276 (33%), Gaps = 23/276 (8%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
             S    ++    +  + +  +  F +  + G  G+  G+     L   F +     S  
Sbjct: 24  KVSFSFIITGGLFMQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASAS 82

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +H+A          T+  S   H + G ++   +        I   V +  +S++    +
Sbjct: 83  VHLAE-------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVI 135

Query: 127 NKAFAIFCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
               +IF   +G+ +L R     ++    K          G+  GF+    G G G  T 
Sbjct: 136 KPYISIFLFTLGVYILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITT 195

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIIL 241
            ++L  G    K   +       ++  A +    S GW            V+   V  ++
Sbjct: 196 PVLLARGNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFSLM 245

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              I+  P+A  L  ++    L +    ++  T+  
Sbjct: 246 LGGIVAAPIAAWLVRIVPSHLLGVLVGGLIIFTNIR 281


>gi|229061244|ref|ZP_04198594.1| hypothetical protein bcere0026_33350 [Bacillus cereus AH603]
 gi|228718115|gb|EEL69755.1| hypothetical protein bcere0026_33350 [Bacillus cereus AH603]
          Length = 245

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G +   I         I + + S   S +   
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVVSHYREGNVVFVIGGIVGGFGAIGSFIGSKFGSLIPAH 88

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGAL 173
            L+   A    L  I M  R  ++  R+                     G+VTG L+GA 
Sbjct: 89  LLHWFTAGMLFLSAIFMFIRLIMFQNRERSSLKEEKELSKDNVIECIFLGLVTGILAGAF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA                    S G++
Sbjct: 149 GIGSAPFIQLGLMVLLGLTIRQSVGTTMLVILPIAIGGGFGYS------------SEGYL 196

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   ++ +L  ++L   +  K +    +  L   FSMIM
Sbjct: 197 DYVLLVQVLIGTMLGAYIGAKFTNYAPRMLLR--FSMIM 233



 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 42/107 (39%), Gaps = 7/107 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D +   I    ++G L+G FG+G    +   L            + +  ++GT++ VI P
Sbjct: 129 DNVIECIFLGLVTGILAGAFGIGSAPFIQLGLMVLL-------GLTIRQSVGTTMLVILP 181

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            ++     +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 182 IAIGGGFGYSSEGYLDYVLLVQVLIGTMLGAYIGAKFTNYAPRMLLR 228


>gi|326386778|ref|ZP_08208399.1| hypothetical protein Y88_2671 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208831|gb|EGD59627.1| hypothetical protein Y88_2671 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 345

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 54/293 (18%), Positives = 101/293 (34%), Gaps = 56/293 (19%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +I+    L+G LSG+FGVGGG +  P+L       G+  ++    A       +   SV
Sbjct: 56  LVIVGLGALTGLLSGMFGVGGGFLTTPLLIF----YGVPPTVAAASAA----SQVTGASV 107

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMG 138
              + H R G I+ +I    I    I T + +L+   +       + +N  + +    +G
Sbjct: 108 SGALAHARRGGIDYQIGAVLIAGGVIGTGIGALLFRVLQALGQIDTTINVLYVVMLGSIG 167

Query: 139 ILM-------------LKRDRLYCERKFP------------------DNYVKYIWGMVTG 167
            LM              +  +    R  P                        + G+ TG
Sbjct: 168 SLMGVESFGAIRARQTGRAQKARRRRHHPLVASLPLRWRFYRSGLYISPLAPLLLGIATG 227

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
            L+  +G+GGG      ML+  G S+     TS      +     ++   +         
Sbjct: 228 ILTMLMGIGGGFILVPAMLYILGMSVTVVVGTSLFQILFVTMATTMMHALTTRA------ 281

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                V++    ++L  S+L   +    +       L +  ++I+   +   A
Sbjct: 282 -----VDLVLASLLLVGSVLGAQIGALFAQKAKPDVLRLVLALIVLAVAVRMA 329



 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 48/126 (38%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++    +G L+ L G+GGG ++VP +            + + V +GTSL  I   ++ + 
Sbjct: 220 LLLGIATGILTMLMGIGGGFILVPAMLYIL-------GMSVTVVVGTSLFQILFVTMATT 272

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H      +++ +    +    +   + +L         L    A+  L + + M    
Sbjct: 273 MMHALTTRAVDLVLASLLLVGSVLGAQIGALFAQKAKPDVLRLVLALIVLAVAVRMALGL 332

Query: 146 RLYCER 151
               + 
Sbjct: 333 GWRPDE 338



 Score = 35.4 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 17/37 (45%), Positives = 21/37 (56%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
           +  V    G +TG LSG  GVGGG  T  L++FYG  
Sbjct: 54  NGLVIVGLGALTGLLSGMFGVGGGFLTTPLLIFYGVP 90


>gi|242242213|ref|ZP_04796658.1| hypothetical membrane protein [Staphylococcus epidermidis W23144]
 gi|242234332|gb|EES36644.1| hypothetical membrane protein [Staphylococcus epidermidis W23144]
 gi|319401800|gb|EFV90008.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
          Length = 275

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 75/190 (39%), Gaps = 21/190 (11%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L        +   I   +A+GTS  ++  T + S + + +   +++K    ++F L  
Sbjct: 32  PTLVYLGVNHHLLHGITTQIAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLP 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMG-ILMLKRD--------RLYCERKFPDNYVK- 159
            ++V S +  ++     N  F +F + +  +LM++          +    R + D   K 
Sbjct: 92  GSLVGSFLSRYLTLDSFNLYFGVFMIFVSILLMIRHKIKPFKIFDKPKYARTYVDAEGKT 151

Query: 160 ----------YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                     +I  +  G L+G  G+GGG     LML  +    + A  TS  +    + 
Sbjct: 152 YRYSVPPLFAFITTLFIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSV 211

Query: 209 PALLVRIYSG 218
            + +  I  G
Sbjct: 212 MSSIGHILQG 221


>gi|254556232|ref|YP_003062649.1| transport protein [Lactobacillus plantarum JDM1]
 gi|308180207|ref|YP_003924335.1| permease [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|254045159|gb|ACT61952.1| transport protein [Lactobacillus plantarum JDM1]
 gi|308045698|gb|ADN98241.1| permease [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 281

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 105/291 (36%), Gaps = 50/291 (17%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  + L++    ++G    + G+GGG+++ P+L+    L        +  A+G S+  +
Sbjct: 1   MIYSLGLMLGVGVIAGIFGAILGIGGGMIVTPILTLGLGLD-------IKYAIGASIIAV 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS  S + + R   +N+++         +  V+ +++   ++ +FL   F    +   
Sbjct: 54  IATSSGSTIAYLRDEMLNLRVAMFLEIATTVGAVLGAVLTGVLNATFLYFLFGALLVFTT 113

Query: 139 ILMLKR------------------------------DRLYCERKFPDNYVKYIWGMVTGF 168
             M+++                                   + +  +    +      GF
Sbjct: 114 YNMIRKLMSKNGELPSVKDDKLATQLNLNGTYYDKALNKQVDYQVENVPGGFSMMFGAGF 173

Query: 169 LSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            SG LG+G G F  L M       +  ++ATS  +  + A  + +V  ++G    G+   
Sbjct: 174 ASGLLGIGSGAFKVLAMDTIMHMPLKPSSATSNLMMGVTAAASAMVYFFNGSIKPGI--- 230

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                       +    I+   + +++   +  + + + F  +M       
Sbjct: 231 ---------AAPLAIGIIVGALIGSRIMTRLKPRLIRMIFVPVMLYLGIQM 272



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G  SGL G+G G   V  +     +        +  +  TS  ++  T+  S M + 
Sbjct: 169 FGAGFASGLLGIGSGAFKVLAMDTIMHM-------PLKPSSATSNLMMGVTAAASAMVYF 221

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +G+I   I       + +  ++ S +++ +    +   F    L +GI M+ +
Sbjct: 222 FNGSIKPGIAAPLAIGIIVGALIGSRIMTRLKPRLIRMIFVPVMLYLGIQMIAK 275


>gi|271501312|ref|YP_003334337.1| hypothetical protein Dd586_2792 [Dickeya dadantii Ech586]
 gi|270344867|gb|ACZ77632.1| protein of unknown function DUF81 [Dickeya dadantii Ech586]
          Length = 266

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 98/238 (41%), Gaps = 25/238 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D + L+ +AS ++G +  + G GGGL+ +PVL       G+  +      + T+      
Sbjct: 9   DILALLFLASVIAGFVDSIAG-GGGLLSIPVLL----AAGLSPAQV----LATNKLQAVG 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R   ++MKIL+  + +  +  V  + +I  +   FL K   +  + +G+ 
Sbjct: 60  GSFSASLYFMRRKAVDMKILRLTVPLTFLGAVFGAWLIQQIHADFLRKLLPVLVIGIGLY 119

Query: 141 MLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L   ++  E    +        + G   GF  G  G G G F  L  +   G ++ KAT
Sbjct: 120 FLLMPKVGGEDRHARLSLLPFSLLGGACVGFYDGFFGPGAGSFYALAYVTLLGFNLAKAT 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A +  ++    F +LL  +  G             V  G  L++L   I+   L  ++
Sbjct: 180 AHAKVLNFTSNFGSLLFFMLGGQ------------VVWGVGLVMLVGQIIGARLGARM 225


>gi|28378025|ref|NP_784917.1| transport protein [Lactobacillus plantarum WCFS1]
 gi|28270859|emb|CAD63764.1| transport protein [Lactobacillus plantarum WCFS1]
          Length = 281

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 105/291 (36%), Gaps = 50/291 (17%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  + L++    ++G    + G+GGG+++ P+L+    L        +  A+G S+  +
Sbjct: 1   MIYSLGLMLGVGVIAGIFGAILGIGGGMIVTPILTLGLGLD-------IKYAIGASIIAV 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS  S + + R   +N+++         +  V+ +++   ++ +FL   F    +   
Sbjct: 54  IATSSGSTIAYLRDEMLNLRVAMFLEIATTVGAVLGAVLTGVLNATFLYFLFGALLVFTT 113

Query: 139 ILMLKR------------------------------DRLYCERKFPDNYVKYIWGMVTGF 168
             M+++                                   + +  +    +      GF
Sbjct: 114 YNMIRKLMSKNGELPSVKDDKLATQLNLNGTYYDKALNKQVDYQVENVPGGFSMMFGAGF 173

Query: 169 LSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            SG LG+G G F  L M       +  ++ATS  +  + A  + ++  ++G    G+   
Sbjct: 174 ASGLLGIGSGAFKVLAMDTIMHMPLKPSSATSNLMMGVTAAASAMIYFFNGSIKPGI--- 230

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                       +    I+   + +++   +  + + + F  +M       
Sbjct: 231 ---------AAPLAIGIIVGALIGSRIMTRLKPRLIRMIFVPVMLYLGIQM 272



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G  SGL G+G G   V  +     +        +  +  TS  ++  T+  S M + 
Sbjct: 169 FGAGFASGLLGIGSGAFKVLAMDTIMHM-------PLKPSSATSNLMMGVTAAASAMIYF 221

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +G+I   I       + +  ++ S +++ +    +   F    L +GI M+ +
Sbjct: 222 FNGSIKPGIAAPLAIGIIVGALIGSRIMTRLKPRLIRMIFVPVMLYLGIQMIAK 275


>gi|238764942|ref|ZP_04625880.1| Inner membrane protein yfcA [Yersinia kristensenii ATCC 33638]
 gi|238696801|gb|EEP89580.1| Inner membrane protein yfcA [Yersinia kristensenii ATCC 33638]
          Length = 268

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 98/234 (41%), Gaps = 25/234 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ + + L+G +  + G GGGL+ VP L       G+  +      + T+       S  
Sbjct: 13  ILFLVALLAGFIDSIAG-GGGLLTVPALLAV----GLPPAQV----LATNKLQSVGGSFS 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +   R G +N+K  K  I +  + +++ ++++ H+    L +   +  + +G+  L  
Sbjct: 64  ASLYFIRRGAVNLKEQKLTIALTVVGSMLGAILVQHMRADILRQILPLLVIGIGVYFLVT 123

Query: 145 DRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSA 200
            +L     +R+        I G   GF  G  G G G F  L  +   G ++ K+TA + 
Sbjct: 124 PKLGEVDQQRRLSAVPFALIAGGGVGFYDGFFGPGAGSFYALAFVTLCGFNLAKSTAHAK 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            ++      +L+  I  G  +     WS+G       L++L   +L   L   +
Sbjct: 184 VLNFTSNLGSLIFFIVGGKVV-----WSIG-------LVMLVGQVLGARLGAHM 225


>gi|251794851|ref|YP_003009582.1| hypothetical protein Pjdr2_0816 [Paenibacillus sp. JDR-2]
 gi|247542477|gb|ACS99495.1| protein of unknown function DUF81 [Paenibacillus sp. JDR-2]
          Length = 272

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 32/257 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+++   ++     + G+GGG+++VPVL      +     I    A+GTSL ++  T++
Sbjct: 4   ILLVLLGVVAAMFGSIVGLGGGIIIVPVLMLLGPQL-TGGEISHATAVGTSLTMLIITAL 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +   ++ K    +        ++ S + S    +  + +F IF LLM  L++ 
Sbjct: 63  ASTLSYAKKKLVDFKSGWMFFITSGPAAMIGSALTSRFQGAAFSLSFGIFMLLMAGLLVA 122

Query: 144 RD-------RLYCERKFPDNYVK-----------YIWGMVTGFLSGALGVGGGIFTNLLM 185
           RD           +R   D   +              G   G +SG  G+GGG     LM
Sbjct: 123 RDYLKPINREWPIQRTIVDAKGQGHTYGYAIVPALAIGFAVGLISGLFGIGGGSLFVPLM 182

Query: 186 -LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
            L +    + ATATS     +I   ++L     GW         LG +N   VL ++P +
Sbjct: 183 VLLFRFPPHTATATS---MFVIFLSSILGSGMHGW---------LGEINYWIVLALVPGA 230

Query: 245 ILITPLATKLSYMIGKK 261
            +   +   ++  +  K
Sbjct: 231 WIGGKVGAVIAGRMSGK 247



 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 7/121 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   +   F  G +SGLFG+GGG + VP++   F+          H A  TS+ VI  +S
Sbjct: 153 IVPALAIGFAVGLISGLFGIGGGSLFVPLMVLLFRF-------PPHTATATSMFVIFLSS 205

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++    H   G IN  I+   +    I   V +++   +    L     I  LL+   ++
Sbjct: 206 ILGSGMHGWLGEINYWIVLALVPGAWIGGKVGAVIAGRMSGKGLLWLLRITLLLLAAQLI 265

Query: 143 K 143
            
Sbjct: 266 Y 266


>gi|300724037|ref|YP_003713352.1| hypothetical protein XNC1_3182 [Xenorhabdus nematophila ATCC 19061]
 gi|297630569|emb|CBJ91234.1| putative membrane protein [Xenorhabdus nematophila ATCC 19061]
          Length = 266

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 99/261 (37%), Gaps = 25/261 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +    + + + ++G +  + G GGGL+ +P L            +    A+ TS      
Sbjct: 9   EIYAFLFLVAVIAGFIDSIAG-GGGLLTIPALL--------STGVSPVQALATSKLQAIG 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +S  + +   R   I+ +  +  I +  I  ++ +L++  +   FL     I  +++G+ 
Sbjct: 60  SSFSASLYFIRRRVIDWQSQRFAIIMTLIGAMLGALLVQFISPDFLRYLLPIMVMIIGLY 119

Query: 141 MLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L    +  E   R+          G   GF  G  G G G F  L  ++  G ++ KAT
Sbjct: 120 FLLVPSIGAEDRQRRLGPIAFGCFAGCGIGFYDGVFGPGAGSFYALSYVMLCGYNLAKAT 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++      AL   I  G  L     W +GFV       +L   ++   +   L  
Sbjct: 180 AHAKVLNLASNLGALGFFILGGQVL-----WLIGFV-------MLIGQMIGARIGAGLVL 227

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G+K +      I F  S  
Sbjct: 228 SRGQKLIRPMLVTIAFLMSIK 248


>gi|255020887|ref|ZP_05292943.1| protein of unknown function DUF81 [Acidithiobacillus caldus ATCC
           51756]
 gi|254969678|gb|EET27184.1| protein of unknown function DUF81 [Acidithiobacillus caldus ATCC
           51756]
          Length = 303

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/288 (18%), Positives = 93/288 (32%), Gaps = 54/288 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + +FL    +   I LI+    L G LSGL GVGGG ++ P+L            +   +
Sbjct: 1   MEIFLPIAHMDINIFLIVAFGLLVGFLSGLTGVGGGFLITPLLIFV--------GVPPLI 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS----- 124
           A+GT    I   S +    H R G ++M++    +       +    +   ++ S     
Sbjct: 53  AVGTGAAQIVGASAVGSYAHWRMGNVDMRMALILLLGSWTGGLAGVRVARWLESSGHFGL 112

Query: 125 FLNKAFAIFCLLMGILMLKRD--RLYCERKFPDNYV------------------------ 158
            +   +      +G+ ML      +   R+ P                            
Sbjct: 113 VVTFLYVGLLGFIGLSMLFESLMAIRGARRPPKAAGESKASWTARLPWPMEFPVSGLRIS 172

Query: 159 ---KYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVR 214
                  G+  G L+  +GVGGG     +ML+           TS          A +  
Sbjct: 173 VLLPISLGLAVGVLTALMGVGGGFVMVPIMLYVLKMPTKVVVGTSLFQLLFT--TAEVGI 230

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
           + +G      P  +L          ++  SI  T    +L   +  + 
Sbjct: 231 LQAGMNHAVDPYLAL---------ALVVGSIFGTQFGARLGARMPGEQ 269



 Score = 43.9 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 8/130 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L I      G L+ L GVGGG VMVP++    ++          V +GTSL  +  T+
Sbjct: 173 VLLPISLGLAVGVLTALMGVGGGFVMVPIMLYVLKM-------PTKVVVGTSLFQLLFTT 225

Query: 83  V-MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             +  ++   +  ++  +    +      T   + + + +    L    A+  + + + M
Sbjct: 226 AEVGILQAGMNHAVDPYLALALVVGSIFGTQFGARLGARMPGEQLRLVLALVVVGVAVKM 285

Query: 142 LKRDRLYCER 151
                L  E 
Sbjct: 286 GLGLILPPEH 295


>gi|118591753|ref|ZP_01549149.1| hypothetical protein SIAM614_22457 [Stappia aggregata IAM 12614]
 gi|118435746|gb|EAV42391.1| hypothetical protein SIAM614_22457 [Stappia aggregata IAM 12614]
          Length = 247

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 85/255 (33%), Gaps = 19/255 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L +   F +  + G  G+  GL      +     +G         A  +       T+
Sbjct: 4   FLLFVAVGFAAQLIDGAIGMAYGL----ASTAVLLGLGFPPVT----ASASVHAAEVFTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H R G +   ++        I     ++++S +D   +    AI+  +MG+ ++
Sbjct: 56  GASALSHWRFGNVRWNMVARLAIPGAIGGFCGAMVLSFIDGDKVRPVIAIYLAIMGLWIV 115

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            +     +R   +  +    G+  G L    G G G      ++  G +   A  ++   
Sbjct: 116 AKAAFRKQRPPAEPRMLPALGLAGGLLDSIGGGGWGPIVTSSLIGQGGAARTAIGSTNAS 175

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
             L+        +            ++G      +L ++   +L  PLA  +   +  + 
Sbjct: 176 EFLVTLAISGTFVL-----------TVGLELWPIILGLIVGGVLAAPLAALVVKHMPDRP 224

Query: 263 LTIGFSMIMFTTSFV 277
           + +    ++   S  
Sbjct: 225 IMLMVGALILLLSVR 239


>gi|163941277|ref|YP_001646161.1| hypothetical protein BcerKBAB4_3359 [Bacillus weihenstephanensis
           KBAB4]
 gi|163863474|gb|ABY44533.1| protein of unknown function DUF81 [Bacillus weihenstephanensis
           KBAB4]
          Length = 251

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G +   I         + + + S   S +  +
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVVSHYREGNVVFVIGGIVGGFGAMGSFIGSKFGSLIPAN 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV-----------KYIWGMVTGFLSGAL 173
            L+   A    L  I M  R  ++ +R                      G+VTG L+GA 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIRLIMFQKRSQSSLKGHKELSKDNLIKCIFLGLVTGILAGAF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA                    S G++
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIRQSVGTTMLVILPIAIGGGFGYS------------SEGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   ++ +L  ++L   +  K +    +  L   FSMIM
Sbjct: 203 DYVLLVQVLMGTMLGAYIGAKFTNYAPRMLLR--FSMIM 239



 Score = 37.4 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 42/107 (39%), Gaps = 7/107 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D +   I    ++G L+G FG+G    +   L            + +  ++GT++ VI P
Sbjct: 135 DNLIKCIFLGLVTGILAGAFGIGSAPFIQLGLMVLL-------GLTIRQSVGTTMLVILP 187

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            ++     +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 188 IAIGGGFGYSSEGYLDYVLLVQVLMGTMLGAYIGAKFTNYAPRMLLR 234


>gi|238788714|ref|ZP_04632506.1| Inner membrane protein yfcA [Yersinia frederiksenii ATCC 33641]
 gi|238723309|gb|EEQ14957.1| Inner membrane protein yfcA [Yersinia frederiksenii ATCC 33641]
          Length = 268

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 98/234 (41%), Gaps = 25/234 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ + + L+G +  + G GGGL+ VP L       G+  +      + T+       S  
Sbjct: 13  ILFLIALLAGFIDSIAG-GGGLLTVPALLAV----GLPPAQV----LATNKLQSVGGSFS 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +   R G +N+K  +  I +  + +++ ++++ H+    L +   +  + +G+  L  
Sbjct: 64  ASLYFIRRGAVNLKEQRLTIALTVVGSMLGAILVQHMRADLLRQILPLLVIGIGVYFLVT 123

Query: 145 DRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSA 200
            +L     +R+        I G   GF  G  G G G F  L  +   G ++ K+TA + 
Sbjct: 124 PKLGEVDQQRRLSALPFALIAGGGVGFYDGFFGPGAGSFYALAFVTLCGFNLAKSTAHAK 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            ++      +L+  I  G  +     WS+G       L++L   +L   L   +
Sbjct: 184 VLNFTSNLGSLIFFIVGGKVV-----WSIG-------LVMLVGQVLGARLGAHM 225


>gi|149202975|ref|ZP_01879946.1| membrane protein [Roseovarius sp. TM1035]
 gi|149143521|gb|EDM31557.1| membrane protein [Roseovarius sp. TM1035]
          Length = 304

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 106/304 (34%), Gaps = 53/304 (17%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    V   I L++    + G LSG+FGVGGG ++ P+L       GI  +    V
Sbjct: 1   MQIYLPIAEVSVNIFLLLGLGGIVGILSGMFGVGGGFILTPLLFFI----GIPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    I   S  + + H R  T+++++    +    I   +  ++ +++        
Sbjct: 53  AVATGANQIMAASFSAVLAHFRRKTVDLEMGTVLLIGGLIGAALGVMVFNYLKSLGQVDL 112

Query: 125 FLNKAFAIFCLLMGILML----------------------------KRDRLYCERKFPDN 156
            +   + +F  ++G +M                              + R      +   
Sbjct: 113 LVTLCYVVFLGVIGGMMFIESLRAIRNTRRGVPPKRKKHGWVHGLPFKMRFRTSGLYISV 172

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRI 215
               + G   G L+  +GVGGG      M++  G        TS      +     L+  
Sbjct: 173 IPPLLVGTSVGILAAIMGVGGGFIMVPAMIYLLGMPTKVVVGTSLFQIIFVTAFTTLLHA 232

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            + +            V+I   + +L   ++     T +   +  + L I  ++++    
Sbjct: 233 MTNYT-----------VDIALAVFLLVGGVIGAQFGTSIGTRMKAEQLRILLAIMVLAVC 281

Query: 276 FVFA 279
              A
Sbjct: 282 GKLA 285


>gi|27469094|ref|NP_765731.1| hypothetical protein SE2176 [Staphylococcus epidermidis ATCC 12228]
 gi|27316643|gb|AAO05818.1|AE016751_113 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
          Length = 298

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 88/258 (34%), Gaps = 23/258 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +A FL+  + G  G+G G       S      GI  ++       T       T+
Sbjct: 4   VLIFAIAGFLAQLVDGSLGMGFGA----SSSSILLTYGIAPAVV----SATVHFSEIATT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H R   ++   +        I+  + + +++ +   ++    A+F L MG  +L
Sbjct: 56  AASGTSHWRFDNVHKPTMLKLAIPGSISAFIGAGVLTFIHGDYIKPFIALFLLSMGFYIL 115

Query: 143 KRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKAT 196
            +       +        ++     G V GFL    G G G     L+L         A 
Sbjct: 116 YQFLFKRAHEHHHVGNLSSFKVIPQGFVAGFLDAIGGGGWGPVNTPLLLSSKKIQPRYAI 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T +     +   A L  I    G+          +N  AV+ +    ++  P++  L  
Sbjct: 176 GTVSASEFFVTSSAALSFIIF-LGVTQ--------INWFAVIALSLGGMVAAPISAYLVK 226

Query: 257 MIGKKYLTIGFSMIMFTT 274
           ++    L I    ++  T
Sbjct: 227 VLPINILAICVGGLIIFT 244


>gi|149190316|ref|ZP_01868589.1| hypothetical protein VSAK1_13922 [Vibrio shilonii AK1]
 gi|148835805|gb|EDL52769.1| hypothetical protein VSAK1_13922 [Vibrio shilonii AK1]
          Length = 259

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 55/265 (20%), Positives = 107/265 (40%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  ++ + L+ + + L+G +  + G GGGL+ +P L       G+  +     A+ T+  
Sbjct: 2   EVTIEILGLLFLVAGLAGFIDAMAG-GGGLLTLPALLSV----GVPPTQ----ALATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  S  +     R+G +++K ++  I    I + V + ++ H+D   L     +  L 
Sbjct: 53  QSSFGSFSATWYFVRNGIVDLKEMRLAILCTFIGSAVGAELVQHIDAGVLTSLIPVLLLG 112

Query: 137 MGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
           + +  L   +      + K  +    +  G   GF  G  G G G IFT   +     SI
Sbjct: 113 ISLYFLLAPQAGEGGGKPKMSETLFAFSVGTGVGFYDGFFGPGTGSIFTICFVAIAQLSI 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             ATA +  ++      AL+  I +G     LP W +G       L++     L   +  
Sbjct: 173 VHATAKTKVLNFTSNLAALIFFIIAG-----LPVWEIG-------LVMAVGGFLGARMGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           K+    GKK++     ++    +  
Sbjct: 221 KVVVSKGKKFIRPLVVIMSMVMALK 245


>gi|312129723|ref|YP_003997063.1| hypothetical protein Lbys_0975 [Leadbetterella byssophila DSM
           17132]
 gi|311906269|gb|ADQ16710.1| protein of unknown function DUF81 [Leadbetterella byssophila DSM
           17132]
          Length = 281

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 7/121 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI++   + G L+GL G GGG +++P L            + M  A+GTSL +IA  S++
Sbjct: 165 LILIEGTVVGVLTGLVGAGGGFLIIPALVIL-------SKLPMKEAVGTSLVIIAAKSLI 217

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            F        I+   L   I    +   +   +   +D S L  AF  F L++GI ++ +
Sbjct: 218 GFFGESGETVIDWLFLSKVIAFAIVGIFIGMALSKKIDGSKLKPAFGWFVLVIGIYIIIK 277

Query: 145 D 145
           +
Sbjct: 278 E 278



 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 89/248 (35%), Gaps = 38/248 (15%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL   F +  +       +A   SL ++  TSV+    + + G +N+K    +     
Sbjct: 45  VPVLVYLFSVDAV-------LATAYSLFIVGTTSVVGSFSYFQKGLVNIKTAVVFGIPSI 97

Query: 109 ITTVVT-SLMISHVDKSFLNK-------------AFAIFCLLMGILMLKRDRLY----CE 150
            +  +T + ++  +     +               FA+  +     M+K+D+       +
Sbjct: 98  ASVFLTRAFIVPAIPNEIFSVGNFTVTKSILLMLLFALLMIFASYSMIKKDKKTCDEEPQ 157

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFP 209
           ++  +  +  I G V G L+G +G GGG      L++     + +A  TS  + A  +  
Sbjct: 158 KQQFNYPLILIEGTVVGVLTGLVGAGGGFLIIPALVILSKLPMKEAVGTSLVIIAAKSLI 217

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
                  SG  +          ++   +  ++  +I+   +   LS  I    L   F  
Sbjct: 218 GFFG--ESGETV----------IDWLFLSKVIAFAIVGIFIGMALSKKIDGSKLKPAFGW 265

Query: 270 IMFTTSFV 277
            +      
Sbjct: 266 FVLVIGIY 273


>gi|153842679|ref|ZP_01993528.1| membrane protein, putative [Vibrio parahaemolyticus AQ3810]
 gi|149745356|gb|EDM56607.1| membrane protein, putative [Vibrio parahaemolyticus AQ3810]
          Length = 83

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 41/81 (50%)

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +S+    +IA   ++  I  G+ + GLP +S+G+V + A+L I   S+L T +  KL+  
Sbjct: 1   SSSVCGCIIAISGMIGFILHGYKVEGLPAYSVGYVYLPALLAIAMTSMLTTKVGAKLATN 60

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +    L   F++ +   +   
Sbjct: 61  LPTAVLKKIFAIFLMFVAATM 81


>gi|50085422|ref|YP_046932.1| hypothetical protein ACIAD2329 [Acinetobacter sp. ADP1]
 gi|49531398|emb|CAG69110.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter sp. ADP1]
          Length = 291

 Score = 74.0 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 55/277 (19%), Positives = 93/277 (33%), Gaps = 43/277 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  L G   G+ GVGGG +M P+L   F+       I  H+A+GT L   A +    
Sbjct: 7   FILAGVLVGFCVGITGVGGGSLMTPILISLFR-------IEPHIAIGTDLLYAAISKFCG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
            M H +   I   I+          +  TS ++ H           L         L G+
Sbjct: 60  SMVHAKKLNIVWPIVIWLAIGSIPASFATSWVLEHYLSQSTHYKAVLTTVLGFMLTLTGV 119

Query: 140 LMLKRDRLYC----------------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
            ++ R R+                             I G+V G       VG G F  +
Sbjct: 120 SIIFRSRIEKFFMKFRKANSQVETVDINSKNKRLYIVIMGIVLGIFVTLSSVGAGAFGIM 179

Query: 184 LMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
            ++       + +   +    + L+              + GL   S G V+   ++ +L
Sbjct: 180 ALIIMFPNLPMIRIIGSDVVHAVLLT------------SVAGLSHMSAGNVDFTLLMWLL 227

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             SI    + T +S  + +K +     + +F     F
Sbjct: 228 IGSIPAIIIGTLISSKMPEKLIRKILGVTLFALGINF 264



 Score = 39.7 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 48/131 (36%), Gaps = 7/131 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I++   + G    L  VG G   +  L   F       ++ M   +G+ +      + 
Sbjct: 153 LYIVIMGIVLGIFVTLSSVGAGAFGIMALIIMF------PNLPMIRIIGSDVVHAVLLTS 206

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-ML 142
           ++ + H   G ++  +L   +       ++ +L+ S + +  + K   +    +GI  M+
Sbjct: 207 VAGLSHMSAGNVDFTLLMWLLIGSIPAIIIGTLISSKMPEKLIRKILGVTLFALGINFMV 266

Query: 143 KRDRLYCERKF 153
              +     K 
Sbjct: 267 HPVKAKPVEKP 277


>gi|23100103|ref|NP_693569.1| hypothetical protein OB2648 [Oceanobacillus iheyensis HTE831]
 gi|22778335|dbj|BAC14604.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 260

 Score = 74.0 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 97/262 (37%), Gaps = 17/262 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + ++  + +  F+   +SG+ G+GG ++  P+L      +G   +   H   G S   + 
Sbjct: 5   IFFMLTVFLIGFIGSMISGMVGIGGSIIKYPMLLYIPSFLGFT-AFTAHEVSGISAVQVL 63

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++     +R  G ++  ++      + I +++ S       +S +N  + I  +   +
Sbjct: 64  FATIGGVWAYRNTGYLHRSLIFYMGISVLIGSIIGSFGSGLFTESIINMVYGILAITAAM 123

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGM----VTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +M    +          + + +  +    V          G  +   +++          
Sbjct: 124 MMFIPRKEIDVTSNEIKFNRIVASVSALIVGIGAGIVGAAGAFLLVPIMLTILKIPTRVT 183

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            A+S  ++ + +  + + ++            S G V +    I++  S+   P+  KL 
Sbjct: 184 IASSLAITFISSIGSTIGKL------------STGQVPLLPAAIMIIASLFAAPIGAKLG 231

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
             +  K L +  ++++  T+  
Sbjct: 232 QKMNTKILQLILAILVSVTALK 253


>gi|218289937|ref|ZP_03494114.1| protein of unknown function DUF81 [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218239922|gb|EED07109.1| protein of unknown function DUF81 [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 261

 Score = 74.0 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 99/263 (37%), Gaps = 19/263 (7%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +    ++   F    L+G+ GVGG +V  P+L     L+G+       VA G S   +  
Sbjct: 4   EMFVTLLAIGFAGSVLAGMVGVGGAIVKYPLLLYLPPLLGLGAFTAHQVA-GISSVQVLC 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   +R+ G ++ +++ D    +   + V + M     +S +N  +A+      ++
Sbjct: 63  ASFAAMWAYRKSGYLHPRLIADMGLAMLAGSFVGAYMAHFYAESVVNLVYAVLATAATLI 122

Query: 141 MLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYK 194
           ML+       R   D       +    G + G  SG +G  G      ++L         
Sbjct: 123 MLRPSASDELRGGVDEIAYPRPLAAGLGALVGLFSGVVGSAGAFLLMPILLGVLRIPTRV 182

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A A+S  V+ + +    +              W+   V  G  L++   S +  PL  +L
Sbjct: 183 AIASSIAVTFVASLGGFVG------------KWAAHEVMWGPALVLAWASAVGAPLGVRL 230

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  ++L    + ++  T   
Sbjct: 231 GRRVHARWLRWLLAGLIAATCVR 253



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 7/113 (6%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             L G  SG+ G  G  +++P+L    +       I   VA+ +S+ V    S+  F+  
Sbjct: 150 GALVGLFSGVVGSAGAFLLMPILLGVLR-------IPTRVAIASSIAVTFVASLGGFVGK 202

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                +         +   +   +   +   V   +L    A       + + 
Sbjct: 203 WAAHEVMWGPALVLAWASAVGAPLGVRLGRRVHARWLRWLLAGLIAATCVRIW 255


>gi|254440248|ref|ZP_05053742.1| conserved domain protein, putative [Octadecabacter antarcticus 307]
 gi|198255694|gb|EDY80008.1| conserved domain protein, putative [Octadecabacter antarcticus 307]
          Length = 305

 Score = 74.0 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 94/278 (33%), Gaps = 54/278 (19%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG +M P+L       GI  +    VA+ T    I  +S    + H R  T++
Sbjct: 28  SGMFGVGGGFLMTPLLFFI----GIPPA----VAVATEAVQIVASSFSGVLAHLRRKTVD 79

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDK------------SFLNKAFAIFCLLMGILMLKR 144
           +++    +    I   +  ++ +++                          +     ++R
Sbjct: 80  LRMGTVLLIGGLIGAAIGVVLFNYLKSLGQVDLLVRLCYVVFLGIIGGLMFIESWRAIRR 139

Query: 145 DRLYCERKFPDNYVK----------------------YIWGMVTGFLSGALGVGGGIFTN 182
            ++   R     +                         I G+  G L+  +GVGGG    
Sbjct: 140 SKIVGARPVRRKHGLVHALPLKMKFRVSGLYISVIPPLIIGLCVGILAAIMGVGGGFIMV 199

Query: 183 LLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
             M++  G        TS      +     ++   + +            V+I   +++L
Sbjct: 200 PAMIYLLGMPTKVVIGTSLFQIIFVTAFTTMLHATTNFT-----------VDIVLAVLLL 248

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              ++   + T++   +  + L I  +M++       A
Sbjct: 249 IGGVIGAQVGTRIGVKMKAENLRILLAMMVLVVCGKLA 286


>gi|103486096|ref|YP_615657.1| hypothetical protein Sala_0603 [Sphingopyxis alaskensis RB2256]
 gi|98976173|gb|ABF52324.1| protein of unknown function DUF81 [Sphingopyxis alaskensis RB2256]
          Length = 315

 Score = 74.0 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 56/293 (19%), Positives = 104/293 (35%), Gaps = 56/293 (19%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +II+     G LSG+FGVGGG +  P+L       GI  +    VA  ++   +   SV
Sbjct: 28  LVIILLGGGVGFLSGMFGVGGGFLTTPLLIF----YGIPPT----VAAASAATQVTGASV 79

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMG 138
              + H   G +++++    +    + +++ + +   +       + +N  +      +G
Sbjct: 80  SGALAHLERGGVDLRMGAVLVVGGLLGSLIGAGLFELLTAWGQIDTVINMLYVALLGSVG 139

Query: 139 ILMLK-------------------------------RDRLYCERKFPDNYVKYIWGMVTG 167
            +M +                               R R Y    +       I GMV G
Sbjct: 140 SIMAREAWAALQNMRAGLPAPARKRRHHPMVANLPLRWRFYRSGLYISPLAPLILGMVVG 199

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
            L+  LGVGGG      MLF  G        TS      +     +V             
Sbjct: 200 ILTMLLGVGGGFIMVPAMLFLLGMGTQVVVGTSLFQILFVTIATTMVHAL---------- 249

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            + G V+I    ++L  S+    +  + +  +  +YL +  ++I+   +   A
Sbjct: 250 -TTGAVDIVLAGLLLLGSVTGAQIGARFAQSVKPEYLRMALAVIVLLVAARMA 301



 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L+ L GVGGG +MVP +            +   V +GTSL  I   ++ + 
Sbjct: 192 LILGMVVGILTMLLGVGGGFIMVPAMLFLL-------GMGTQVVVGTSLFQILFVTIATT 244

Query: 87  MEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H    G +++ +    +        + +     V   +L  A A+  LL+   M    
Sbjct: 245 MVHALTTGAVDIVLAGLLLLGSVTGAQIGARFAQSVKPEYLRMALAVIVLLVAARMAVDL 304

Query: 146 RLYCER 151
            +  + 
Sbjct: 305 FIRPDE 310



 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 30/64 (46%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
           +  V  + G   GFLSG  GVGGG  T  L++FYG     A A++A      +    L  
Sbjct: 26  NALVIILLGGGVGFLSGMFGVGGGFLTTPLLIFYGIPPTVAAASAATQVTGASVSGALAH 85

Query: 215 IYSG 218
           +  G
Sbjct: 86  LERG 89


>gi|307131866|ref|YP_003883882.1| hypothetical protein Dda3937_00495 [Dickeya dadantii 3937]
 gi|306529395|gb|ADM99325.1| conserved inner membrane protein [Dickeya dadantii 3937]
          Length = 266

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 99/238 (41%), Gaps = 25/238 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D + L+ +AS ++G +  + G GGGL+ +PVL       G+  +      + T+      
Sbjct: 9   DVLALLFLASVIAGFVDSIAG-GGGLLSIPVLL----AAGLSPAQV----LATNKLQAVG 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S+ + +   R   ++MKILK  + +  +  +  + +I  +   FL K   +  + +G+ 
Sbjct: 60  GSLSASLYFIRRKAVDMKILKLAVPLTFVGAMFGAWLIQQIHADFLRKLLPVLVIGIGLY 119

Query: 141 MLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L   ++  E    +        + G   GF  G  G G G F  L  +   G ++ KAT
Sbjct: 120 FLLMPKVGDEDRHARMSLLPFSLLGGASVGFYDGFFGPGAGSFYALAYVTLLGFNLAKAT 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A +  ++    F +LL  +  G             V  G  L++L   I+   L  ++
Sbjct: 180 AHAKVLNFTSNFGSLLFFMLGGQ------------VVWGVGLVMLVGQIIGARLGARM 225


>gi|329888276|ref|ZP_08266874.1| hypothetical protein BDIM_01990 [Brevundimonas diminuta ATCC 11568]
 gi|328846832|gb|EGF96394.1| hypothetical protein BDIM_01990 [Brevundimonas diminuta ATCC 11568]
          Length = 259

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 96/261 (36%), Gaps = 25/261 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L   A  L G   GL G GG ++ VP++     +         H+A+GTS   +A  +  
Sbjct: 5   LGAGAGSLVGFTLGLVGGGGSILAVPLIVYLVGVKDP------HLAIGTSAFAVAANAFA 58

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + + H R G +  KI   +     +   + S +   VD   L   FA+  L++G LML+ 
Sbjct: 59  NLLNHARRGAVKWKIALLFAAAGVVGAALGSSLGKAVDGQKLLALFAVLMLVVGALMLRG 118

Query: 145 DRLYCERKFP----DNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATS 199
                +        +       G  TG LSG  G+GGG      LM   G  IY A  +S
Sbjct: 119 RSAAGDPHVTLNAGNAPKLVGTGAATGMLSGFFGIGGGFLIVPSLMGSTGMPIYYAVGSS 178

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                            +GW            V+     + +   +L      +L+ ++ 
Sbjct: 179 LVGVTAFGLTTAFNYALAGW------------VDWPLAAVFIGGGVLGGLAGARLAKLMS 226

Query: 260 KKY--LTIGFSMIMFTTSFVF 278
            +   L   F+ ++F  +   
Sbjct: 227 SRKGLLNSVFAGLIFVVALYM 247


>gi|169826155|ref|YP_001696313.1| hypothetical protein Bsph_0558 [Lysinibacillus sphaericus C3-41]
 gi|168990643|gb|ACA38183.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
          Length = 274

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 84/230 (36%), Gaps = 33/230 (14%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P        +G+   I     +G S+ ++  T + S + + +  T++ K    +      
Sbjct: 30  PATLYIGLNLGMIPDITPQKVVGLSVVMMIFTGLASTLSYMKSKTVDYKTGYIFFIGSIP 89

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK---------- 159
            +++ + +   +D    N  F I  +++ I++L RD+L     F  N ++          
Sbjct: 90  GSILGAWVNKGLDLPSFNLYFGILLIILSIILLVRDKLKPVEWFVKNGLQQEFTDAQGKT 149

Query: 160 ----------YIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAF 208
                      ++    GF SG  G+GGG      M + +    + A ATS  +  L + 
Sbjct: 150 FVYGYPIWFAILFTFGVGFASGLFGIGGGSMIVPAMIILFLFPPHVAIATSMFLVFLTSV 209

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 IY            LG V     + ++P + +   L   L+  I
Sbjct: 210 VNTASHIY------------LGHVPWLYTIPVIPGAYIGAKLGAALNKKI 247



 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 7/102 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I+ +F  G  SGLFG+GGG ++VP +   F           HVA+ TS+ ++  TS
Sbjct: 156 IWFAILFTFGVGFASGLFGIGGGSMIVPAMIILFLF-------PPHVAIATSMFLVFLTS 208

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           V++   H   G +        I    I   + + +   +   
Sbjct: 209 VVNTASHIYLGHVPWLYTIPVIPGAYIGAKLGAALNKKIKSD 250


>gi|222824322|ref|YP_002575896.1| conserved hypothetical integral membrane protein (DUF81 domain
           protein) [Campylobacter lari RM2100]
 gi|222539543|gb|ACM64644.1| conserved hypothetical integral membrane protein (DUF81 domain
           protein) [Campylobacter lari RM2100]
          Length = 259

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 75/197 (38%), Gaps = 13/197 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            ++    SG  SG+FG+GGG+++VP +            +  H A+  S+  +   S+  
Sbjct: 8   YMIIGIFSGIASGVFGIGGGMIIVPFMLTL--------GLSSHHAVAISVVQMIFASIFG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              + +   + +K          I  + + +++++     L   F    ++  +      
Sbjct: 60  SYLNYKKKNLILKDGLIIGLGGFIGAMFSGVLLAYFSDITLTSIFLCVSIVFFLKFAFNQ 119

Query: 146 RLYCER----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSA 200
           +             N +  I G+ TG  + +LG+GGG+    ++ ++ G    K    S 
Sbjct: 120 KSTIGNINHSNILKNSILLICGVFTGIFAISLGIGGGLLITPILAYFLGYDTKKVVPLSL 179

Query: 201 GVSALIAFPALLVRIYS 217
                 +   +   +Y+
Sbjct: 180 FFVIFASISGISSFVYN 196


>gi|270262878|ref|ZP_06191149.1| hypothetical protein SOD_c05030 [Serratia odorifera 4Rx13]
 gi|270043562|gb|EFA16655.1| hypothetical protein SOD_c05030 [Serratia odorifera 4Rx13]
          Length = 257

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 89/234 (38%), Gaps = 25/234 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ V + L+G +  + G GGGL+ VP L            +    A+ T+       S  
Sbjct: 4   VLFVVALLAGFIDSIAG-GGGLLTVPALLAV--------GVSPAQALATNKLQSVGGSFS 54

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +   R   +++   K  I +  I ++  ++++ H+    L +   +  + +G+  L  
Sbjct: 55  ASLYFIRRRAVDLNDQKLTILLALIGSIAGAILVQHMRADLLRQMLPLLVIGIGLYFLLT 114

Query: 145 DRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSA 200
            RL     +R+        + G   GF  G  G G G F  L  +   G ++ K+TA + 
Sbjct: 115 PRLGESDRQRRLSALPFGLVAGGCVGFYDGFFGPGAGSFYALAYVTLCGFNLAKSTAHAK 174

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            ++       L   I  G             V  G  L++L   +L   L   +
Sbjct: 175 VLNFTSNVGGLTFFIIGGK------------VVWGIGLVMLMGQVLGARLGAHM 216


>gi|254503301|ref|ZP_05115452.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11]
 gi|222439372|gb|EEE46051.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11]
          Length = 261

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 94/253 (37%), Gaps = 25/253 (9%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +   D + L+ VA+F++G +  + G GGGL+ +P L  A         +     +GT+ 
Sbjct: 2   AEVAFDILLLLFVAAFIAGFIDSIAG-GGGLIAIPALLMA--------GLPPLETLGTAK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 S  + + + R G ++ K++     +     V  +L+ + +    L  A  +  +
Sbjct: 53  LQALFGSGSATLAYSRRGLVDYKVILPMAGLSAAGAVCGALVATILPTDVLQTALPVVLI 112

Query: 136 LMGILMLKRDRLYCERKFPDNYVKYIWGMV---TGFLSGALGVG-GGIFTNLLMLFYGAS 191
           ++ +    +  +    + P          V    GF  G  G G G  F    +   GA 
Sbjct: 113 VIAVYFALKPNVGAVEQVPRMTGFAFGATVVPTIGFYDGIFGPGTGSFFMLAFVALMGAG 172

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           + KATA +  ++        LV + SG             V     L++     L     
Sbjct: 173 LLKATAHTKVLNFASNLAGFLVFMVSGV------------VFWKIGLLMGVGQFLGAQAG 220

Query: 252 TKLSYMIGKKYLT 264
           +KL+   G K + 
Sbjct: 221 SKLAMKNGAKIIR 233


>gi|328552216|gb|AEB22708.1| permease [Bacillus amyloliquefaciens TA208]
          Length = 247

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 86/219 (39%), Gaps = 21/219 (9%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
              L+ I   + +H A+GTSL  +A TS+     H R G I MKI           +   
Sbjct: 25  VIALLTILFHVPIHTALGTSLAGMAFTSLSGAFSHYREGNIQMKIGLIVGVFAAFGSFFG 84

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK--------FPDNYVKYIWGMVT 166
           + + S +    L+   A    L  +L+L R  +  E +                + G++ 
Sbjct: 85  ARLTSLIPADLLHYLTAGMLFLSALLILVRLFILKETQEDSGRQSNLNIWVKAVVLGIIA 144

Query: 167 GFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G LSG  G+G   F  + LM+    SI ++  T+  V   +A    L  +          
Sbjct: 145 GILSGTFGIGSAPFIQIGLMILLRLSIRQSVGTTMLVIIPLAVGGGLGYV---------- 194

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
             + GFV+   ++ +L  ++    +  K + ++ K  L 
Sbjct: 195 --TEGFVDYMLLVKVLIGTMCGAYVGAKFTNLVPKVILK 231



 Score = 35.8 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 7/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +V   ++G LSG FG+G    +   L    +L        +  ++GT++ VI P +V   
Sbjct: 138 VVLGIIAGILSGTFGIGSAPFIQIGLMILLRL-------SIRQSVGTTMLVIIPLAVGGG 190

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + +   G ++  +L   +        V +   + V K  L  A  +   + G+++L 
Sbjct: 191 LGYVTEGFVDYMLLVKVLIGTMCGAYVGAKFTNLVPKVILKSAIFLTPAIAGLMLLF 247


>gi|52549948|gb|AAU83797.1| hypothetical protein GZ34A6_8 [uncultured archaeon GZfos34A6]
          Length = 252

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 95/260 (36%), Gaps = 24/260 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I + I     +G +SG+FG+GGG V +P+L+ A   +          A G +L ++ 
Sbjct: 9   ITLIVIYICIGLFAGFMSGMFGIGGGAVRIPLLNLAGLPL--------LSAFGINLFIVP 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S++  +   +   I+ +I            ++ + +   +    L   F    +L+  
Sbjct: 61  FSSLVGAVS--QRANIDKEIALYLALGGVFGALIGAFLAGLIPTFILAIIFFALSILIAF 118

Query: 140 LMLKRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            +     +     R    +   +       F++   G   G      +   G  I+KA A
Sbjct: 119 GIFLDRIVPALAHRINFTHRDVFASSFFLSFIAAIRGGSAGSLFPAFLKAIGCDIHKAIA 178

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS  V+      A  +             WS G +     +  L  S++   L + +S  
Sbjct: 179 TSLCVTIFTCIGAAAIF------------WSRGDIIWWPAIFALIGSMIGAKLGSAVSLK 226

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
               +L IG  M++   + +
Sbjct: 227 TKSIWLEIGLGMLVVALALI 246


>gi|242243620|ref|ZP_04798064.1| protein of hypothetical function DUF81 [Staphylococcus epidermidis
           W23144]
 gi|242232971|gb|EES35283.1| protein of hypothetical function DUF81 [Staphylococcus epidermidis
           W23144]
          Length = 299

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 87/259 (33%), Gaps = 24/259 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +A FL+  + G  G+G G       S      GI  ++       T       T+
Sbjct: 4   VLIFAIAGFLAQLVDGSLGMGFGA----SSSSILLTYGIAPAVV----SATVHFSEIATT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H R   ++   +        I+  + + +++ +   ++    A+F L MG  +L
Sbjct: 56  AASGTSHWRFDNVHKPTMLKLAIPGSISAFIGAGVLTFIHGDYIKPFIALFLLSMGFYIL 115

Query: 143 KRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKA 195
            +       +         ++     G V GFL    G G G     L+L         A
Sbjct: 116 YQFLFKRAHEHHHHVGDLSSFKVIPQGFVAGFLDAIGGGGWGPVNTPLLLSSKKIQPRYA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T +     +   A L  I             +  +N  AV+ +    ++  P++  L 
Sbjct: 176 IGTVSASEFFVTSSAALSFIIF---------LGITQINWFAVIALSLGGMVAAPISAYLV 226

Query: 256 YMIGKKYLTIGFSMIMFTT 274
            ++    L I    ++  T
Sbjct: 227 KVLPINILAICVGGLIIFT 245


>gi|229134474|ref|ZP_04263287.1| hypothetical protein bcere0014_33850 [Bacillus cereus BDRD-ST196]
 gi|228649095|gb|EEL05117.1| hypothetical protein bcere0014_33850 [Bacillus cereus BDRD-ST196]
          Length = 256

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G +   I         I + + S   S +  +
Sbjct: 40  IPIHVALATSLTAMAFTTLSGVVSHYREGNVVFVIGGIVGGFGAIGSFIGSKFGSLIPAN 99

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV-----------KYIWGMVTGFLSGAL 173
            L+   A    L  I M  R  ++ +R                      G+VTG L+GA 
Sbjct: 100 LLHWFTAGMLFLSAIFMFIRLIIFQKRSQSSLKGHKELSKDNVIKCIFLGLVTGILAGAF 159

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA                    S G++
Sbjct: 160 GIGSAPFIQLGLMVLLGLTIRQSVGTTMLVILPIAIGGGFGYS------------SEGYL 207

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   ++ +L  ++L   +  K +    +  L   FSMIM
Sbjct: 208 DYVLLVQVLIGTMLGAYIGAKFTNYAPRMLLR--FSMIM 244



 Score = 38.9 bits (90), Expect = 0.86,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 42/107 (39%), Gaps = 7/107 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D +   I    ++G L+G FG+G    +   L            + +  ++GT++ VI P
Sbjct: 140 DNVIKCIFLGLVTGILAGAFGIGSAPFIQLGLMVLL-------GLTIRQSVGTTMLVILP 192

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            ++     +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 193 IAIGGGFGYSSEGYLDYVLLVQVLIGTMLGAYIGAKFTNYAPRMLLR 239


>gi|269126271|ref|YP_003299641.1| hypothetical protein Tcur_2036 [Thermomonospora curvata DSM 43183]
 gi|268311229|gb|ACY97603.1| protein of unknown function DUF81 [Thermomonospora curvata DSM
           43183]
          Length = 257

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 77/237 (32%), Gaps = 26/237 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VPVL                 A+  SL V+  TS ++ + H R G +       +  
Sbjct: 28  ILTVPVLVYL-------AGADPRQAIAMSLVVVGVTSAVALVPHARAGNVRWSTGLLFGA 80

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK----RDRLYCERKFPDNYVKYI 161
                      +   V +  L   FA+  L+    ML           ER         I
Sbjct: 81  AGMAGAYAGGWLAQFVPERVLLAGFAVMMLVTAAAMLGLCCAARSPAPERAEGRRPWPKI 140

Query: 162 W--GMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
              G   G ++G +G GGG      +    G  +  A  TS  V AL +  AL   ++S 
Sbjct: 141 LAEGAAVGLVTGLVGAGGGFLVVPALALLGGLPMPAAVGTSLLVIALKSGAALAGYLHST 200

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                        V+    L +  +++  +    K++  +    L  GF   +    
Sbjct: 201 T------------VDWPLALAVTALAVAGSLAGAKIARAVPPGALRKGFGWFVVVMG 245



 Score = 63.9 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I+      G ++GL G GGG ++VP L+           + M  A+GTSL VIA  S  +
Sbjct: 140 ILAEGAAVGLVTGLVGAGGGFLVVPALALL-------GGLPMPAAVGTSLLVIALKSGAA 192

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +    T++  +      +    ++  + +   V    L K F  F ++MG+ +L   
Sbjct: 193 LAGYLHSTTVDWPLALAVTALAVAGSLAGAKIARAVPPGALRKGFGWFVVVMGVGVLASQ 252


>gi|70731611|ref|YP_261352.1| hypothetical protein PFL_4260 [Pseudomonas fluorescens Pf-5]
 gi|68345910|gb|AAY93516.1| membrane protein, putative [Pseudomonas fluorescens Pf-5]
          Length = 249

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 80/230 (34%), Gaps = 17/230 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G+   +   +A GT+L ++ P  +++   + +   I  +       +      + 
Sbjct: 29  AIPVLGVLFGLDQQIAQGTALVMVVPNVLLALWRYHQRNRIEARHALPLALMGFSFAWLG 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMG----ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           S+    +D   +   F  F L++     + M                   + G  +G + 
Sbjct: 89  SIWAVGIDAQKMRIGFVAFLLVLSAYNLLRMFMASAPASSEMRYPWPWLGVLGAASGAMG 148

Query: 171 GALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G  GVGG +    ++   +G +   A   S  ++               +G +    W++
Sbjct: 149 GLFGVGGAVVATPVLTSVFGTTQVVAQGLSLALALP-----STGVTLVTYGFHHQVDWAI 203

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           G       L +    +L      K+++ + ++ L   F   +   + + A
Sbjct: 204 G-------LPLAAGGLLSISWGVKVAHALPERLLRGLFCGFLVVCAVMLA 246



 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            + V    SG + GLFGVGG +V  PVL+  F            VA G SL +  P++ +
Sbjct: 136 WLGVLGAASGAMGGLFGVGGAVVATPVLTSVF-------GTTQVVAQGLSLALALPSTGV 188

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + + +  H  ++  I         ++      +   + +  L   F  F ++  +++  +
Sbjct: 189 TLVTYGFHHQVDWAIGLPLAAGGLLSISWGVKVAHALPERLLRGLFCGFLVVCAVMLAFK 248


>gi|259415120|ref|ZP_05739042.1| membrane protein [Silicibacter sp. TrichCH4B]
 gi|259349030|gb|EEW60784.1| membrane protein [Silicibacter sp. TrichCH4B]
          Length = 305

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 51/287 (17%), Positives = 100/287 (34%), Gaps = 53/287 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    V     LI+    + G LSG+FGVGGG ++ P+L       GI  +    V
Sbjct: 1   MNIYLPIAEVAVNAFLILGLGGMVGVLSGMFGVGGGFLLTPLLFFI----GIPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    I  +SV   + H R  T+++K+         I   +   + +++        
Sbjct: 53  AVATGANQIVASSVSGVLAHLRRRTVDLKMGAVLQAGGLIGAALGVAIFNYLKSLGQIDL 112

Query: 125 FLNKAFAIFCLLMGILML----------------------------KRDRLYCERKFPDN 156
           F+   + +F  ++G LM                              + R      +   
Sbjct: 113 FVTLCYVVFLGIVGGLMFIESVNALRKSKRGGPPKRRQRGWVHSLPLKMRFRTSGLYISV 172

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRI 215
                 G+  G L+  +GVGGG      M++  G        TS      +     ++  
Sbjct: 173 LPPVAVGLFVGMLTAIMGVGGGFIMVPAMIYLLGMPTKVVVGTSLFQIITVTAATTMMHA 232

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
            +              V+I   +++L   ++     T++  ++  + 
Sbjct: 233 ITNQT-----------VDIVLAVLLLIGGVVGAQFGTRIGTLLKAEQ 268


>gi|77462758|ref|YP_352262.1| hypothetical protein RSP_2206 [Rhodobacter sphaeroides 2.4.1]
 gi|77387176|gb|ABA78361.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
          Length = 306

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 98/285 (34%), Gaps = 55/285 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    V   I L++    + G +SG+FGVGGG ++ P+L       GI  +    V
Sbjct: 1   MQLYLPIAEVSVNIFLLLGLGGIVGFMSGMFGVGGGFLITPLLFFI----GIPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    +  +SV   +   +  T++ ++    +      +     + + ++       
Sbjct: 53  AVATGANQVVASSVSGVLAQLKRKTVDFRMGLVLLAGGVAGSAFGVAVFARLNTLGQVDL 112

Query: 125 FLNKAFAIFCLLMGILML------------------------------KRDRLYCERKFP 154
           F+  ++ +F  L+G LML                               + +      + 
Sbjct: 113 FVQLSYVLFLGLVGALMLQESVRALRRARRPDAPVKRARQHGWAHKMPFKMKFRASGLYI 172

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLV 213
                 + G   GFL+  +G GGG      M++  G        TS      +     ++
Sbjct: 173 SVIPPLMVGAFVGFLAAIMGAGGGFIMVPAMIYLLGMPTKIVIGTSLFQIIFVTAFTTVM 232

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
              +   ++    +           +++   ++   +  ++   +
Sbjct: 233 HAVTSQTVDMALAF-----------LLIVGGVVGAQIGARIGVRL 266


>gi|157374704|ref|YP_001473304.1| hypothetical protein Ssed_1565 [Shewanella sediminis HAW-EB3]
 gi|157317078|gb|ABV36176.1| protein of unknown function DUF81 [Shewanella sediminis HAW-EB3]
          Length = 257

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 102/263 (38%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++     ++G +  + G GGGL+ +P L       GI      H+A+GT+       S 
Sbjct: 11  AILAGIGLIAGFIDAVAG-GGGLLSIPALLTV----GIPP----HLALGTNKLAACFGSS 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+   + R       +         I  V  + ++  +DKS+L K   +  +++ I  L 
Sbjct: 62  MAAFTYYRKNLFTPNLWYHTFIATFIGAVSGTFIVYLIDKSWLEKWLPVIIIVIAIYTLL 121

Query: 144 RDR------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
           +            RK      +++ G++ GF  G  G G G F T     ++   +  + 
Sbjct: 122 KPNAMGCTSFTPLRKPATAVKQWLQGVILGFYDGFAGPGTGAFWTISSTTYHRLPLLHSC 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++      +LL+             ++LG VN+   L +    +L + +  + + 
Sbjct: 182 GLARAMTFTSNLTSLLIF------------FALGKVNLVIGLSMGLCMMLGSFIGARSAI 229

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G +++   F  I+  T+   A
Sbjct: 230 KFGVQFIRPLFVTIVLLTAAKLA 252


>gi|312884383|ref|ZP_07744089.1| membrane protein [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367966|gb|EFP95512.1| membrane protein [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 260

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 108/263 (41%), Gaps = 25/263 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +   + + ++   +  +  +  + G GGG++ +P L       G+  +     A+ T+  
Sbjct: 2   ELSFELLSMLFFVAIAASFIDAMAG-GGGMLTLPALL----AAGVPPTQ----ALATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             A  S  +     R G +N+K ++  IF   + +   + ++ ++D + L     I  ++
Sbjct: 53  QSAFGSFSASWYFVRKGIVNLKEMRLAIFCTFLGSAAGAEVVQYIDANLLTSLIPILLVV 112

Query: 137 MGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
           + +  L   +        +  +    ++ G   GF  G  G G G IFT   ++F   S+
Sbjct: 113 ISLYFLLMPKTRQHEGKARLSETLFAFLVGGGVGFYDGFFGPGTGSIFTVCFVVFANLSL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++      ALL  I +G     LP W LG       L++    ++   L  
Sbjct: 173 VEATAKTKVLNFTSNIGALLFFIIAG-----LPIWELG-------LVMALGGVIGARLGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTS 275
           ++    G+K++     ++    +
Sbjct: 221 RVVVTKGQKWIRPLVIVMSMLMA 243


>gi|149276481|ref|ZP_01882625.1| ABC transporter, permease component [Pedobacter sp. BAL39]
 gi|149233001|gb|EDM38376.1| ABC transporter, permease component [Pedobacter sp. BAL39]
          Length = 312

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 98/258 (37%), Gaps = 23/258 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              +++  F++  + G  G+G G+V     +      G++ ++      G+       +S
Sbjct: 65  FLWMLLVGFMAQMVDGALGMGYGVVS----TTLLLSGGLNPAVI----SGSIHTAEMFSS 116

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD---KSFLNKAFAIFCLLMGI 139
             S   H R G +N K+ K  +    +  +  +L++ +       ++    +I+ LL+GI
Sbjct: 117 GASGFSHYRFGNVNKKLFKTLLVPGVLGAIAGALLLGYAGEAFSQYIRPVISIYTLLLGI 176

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            +L        +        ++ G   GFL    G G G      ++  G +      + 
Sbjct: 177 RILSNAFKEKAKPQKVKRAGWLAGAG-GFLDSFGGGGWGPLVTSTLISKGRTPKYVIGSV 235

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +     +   + +   +            LG  +  ++L ++   ++  PLA +L   + 
Sbjct: 236 SLTEFFVTMASAITFFFI-----------LGVSHWQSILGLIVGGVIAAPLAARLVGKLP 284

Query: 260 KKYLTIGFSMIMFTTSFV 277
            K + IG + I+  +S  
Sbjct: 285 IKKMFIGVATIVIISSLR 302


>gi|297242679|ref|ZP_06926617.1| permease [Gardnerella vaginalis AMD]
 gi|296888890|gb|EFH27624.1| permease [Gardnerella vaginalis AMD]
          Length = 267

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 57/261 (21%), Positives = 94/261 (36%), Gaps = 25/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I LI+    L+G LSGLFGVGGG+V+VP L+   +            A  TSL  I  TS
Sbjct: 15  IVLIVFIGLLAGFLSGLFGVGGGMVIVPALTVFMKFD-------QRHATATSLVAIIITS 67

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   + +  +G ++       I      + +       + K      F +F LL+ I   
Sbjct: 68  LCGSIVYGLNGKVSFLSAFFLIIGSVFGSQIGVYFSHILPKKIFPWCFTLFVLLV-ICSS 126

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALG-----VGGGIFTNLLMLFYGASIYKATA 197
           +         F  +++K I  +  G +SG         GGGI    + L  G     A  
Sbjct: 127 QVWIPLRNVDFNVSFLKAICLIFIGVVSGIFSGILGVGGGGIIVPCVQLLLGMGDLMARG 186

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T+  V+        +      +       ++ G       +II   +     L   ++  
Sbjct: 187 TALLVTLPTVISGSIANARYHYTH-----FTEG-------IIIGIFATFTVNLGAIIARS 234

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           I      I F + +F+     
Sbjct: 235 ISPFICNILFCIFLFSVCLQM 255



 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 13/134 (9%)

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSA 200
           + R+    +  F +  +    G++ GFLSG  GVGGG+     +  F       ATATS 
Sbjct: 1   MLRNIFKIKYNFQNIVLIVFIGLLAGFLSGLFGVGGGMVIVPALTVFMKFDQRHATATSL 60

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
               + +    +V   +G             V+  +   ++  S+  + +    S+++ K
Sbjct: 61  VAIIITSLCGSIVYGLNGK------------VSFLSAFFLIIGSVFGSQIGVYFSHILPK 108

Query: 261 KYLTIGFSMIMFTT 274
           K     F++ +   
Sbjct: 109 KIFPWCFTLFVLLV 122



 Score = 36.6 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 33/84 (39%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +A GT+L V  PT +   + + R+   +             T  + +++   +     N 
Sbjct: 183 MARGTALLVTLPTVISGSIANARYHYTHFTEGIIIGIFATFTVNLGAIIARSISPFICNI 242

Query: 129 AFAIFCLLMGILMLKRDRLYCERK 152
            F IF   + + M+ +  +  + K
Sbjct: 243 LFCIFLFSVCLQMILKTGILAKNK 266


>gi|160902447|ref|YP_001568028.1| hypothetical protein Pmob_0983 [Petrotoga mobilis SJ95]
 gi|160360091|gb|ABX31705.1| protein of unknown function DUF81 [Petrotoga mobilis SJ95]
          Length = 246

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 93/262 (35%), Gaps = 22/262 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +   I+  FL+  + G  G+  G +     +      G+  +    ++  +      
Sbjct: 1   MQTLWFFIIVGFLAQVVDGALGMAYGTIS----NALLLSAGVPPA----ISSASVHFAEI 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+ +S   H + G ++  + K  +    +  V+ + +++++D   +     I+ L+MG+
Sbjct: 53  FTTSISGFSHLKLGNVDKSLFKKLLIPGIVGGVLGAYILTNIDGDKIKPFIGIYLLIMGV 112

Query: 140 LMLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
            +L +      Y E K        I G++ GF     G G G      ++  G +  K  
Sbjct: 113 RILYKVTTMHKYSEEKITRRRHYSILGLLGGFFDAIGGGGWGPIVTSTLVSDGKNPRKTI 172

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            +       +    ++                L   N   ++ ++    L  P+A  ++ 
Sbjct: 173 GSVNAAEFFVTISEVVTFFAL-----------LSQFNWSVIIGLIIGGSLAAPIAALITK 221

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            I  K L I    I+   S   
Sbjct: 222 KIPAKVLMISLGCIITFLSVRM 243


>gi|52549891|gb|AAU83740.1| hypothetical protein GZ33E1_37 [uncultured archaeon GZfos33E1]
          Length = 252

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 98/260 (37%), Gaps = 24/260 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I + I     +G +SG+FG+GGG V +P+L+ A         + +  A G +L ++ 
Sbjct: 9   ITLIVIYICIGLFAGFMSGMFGIGGGAVRIPLLNLAG--------LPLLSAFGINLFIVP 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S++  +   +   I+ +I            ++ + +   +    L   F    +++ +
Sbjct: 61  FSSLVGAVS--QRANIDKEIALYLAVGGVFGALIGAFLAGLIPTLILAIIFFALSIVIAL 118

Query: 140 LMLKRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            +     +     R    +   +    +  F++   G   G      +   G  I+KA A
Sbjct: 119 GIFLDRIVPALAHRINFTHRDIFASSFLLSFIAAIRGGSAGSLFPAFLKAIGCDIHKAIA 178

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS  V+      A  +             WS G +     +  L  S++   L + +S  
Sbjct: 179 TSLCVTIFTCIGAAAIF------------WSRGDIIWWPAIFALIGSMIGAKLGSTVSLK 226

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
               +L IG  M++   + +
Sbjct: 227 TKSIWLEIGLGMLVVALALI 246


>gi|311114666|ref|YP_003985887.1| hypothetical protein HMPREF0421_20782 [Gardnerella vaginalis ATCC
           14019]
 gi|310946160|gb|ADP38864.1| conserved hypothetical protein [Gardnerella vaginalis ATCC 14019]
          Length = 267

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 57/261 (21%), Positives = 94/261 (36%), Gaps = 25/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I LI+    L+G LSGLFGVGGG+V+VP L+   +            A  TSL  I  TS
Sbjct: 15  IVLIVFIGLLAGFLSGLFGVGGGMVIVPALTVFMKFD-------QRHATATSLVAIIITS 67

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   + +  +G ++       I      + +       + K      F +F LL+ I   
Sbjct: 68  LCGSIVYGLNGKVSFLSAFFLIIGSVFGSQIGVYFSHILPKKIFPWCFTLFVLLV-ICSS 126

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALG-----VGGGIFTNLLMLFYGASIYKATA 197
           +         F  +++K I  +  G +SG         GGGI    + L  G     A  
Sbjct: 127 QVWIPLRNVDFNVSFLKAICLIFIGVVSGIFSGILGVGGGGIIVPCVQLLLGMGDLMARG 186

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T+  V+        +      +       ++ G       +II   +     L   ++  
Sbjct: 187 TALLVTLPTVISGSIANARYHYTH-----FTEG-------IIIGIFATFTVNLGAIIARS 234

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           I      I F + +F+     
Sbjct: 235 ISPFICNILFCIFLFSVCLQM 255



 Score = 36.6 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 33/84 (39%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +A GT+L V  PT +   + + R+   +             T  + +++   +     N 
Sbjct: 183 MARGTALLVTLPTVISGSIANARYHYTHFTEGIIIGIFATFTVNLGAIIARSISPFICNI 242

Query: 129 AFAIFCLLMGILMLKRDRLYCERK 152
            F IF   + + M+ +  +  + K
Sbjct: 243 LFCIFLFSVCLQMILKTGILAKNK 266


>gi|49478322|ref|YP_037749.1| permease [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|49329878|gb|AAT60524.1| conserved hypothetical protein, possible permease [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 251

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 88/219 (40%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I           + + S + S +   
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSLIPPY 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFP-----------DNYVKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +   +  R+             +       G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGMMAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 203 DHILLLQVLIGTMLGAYIGAKFTNYAPRMLLK--FSMIM 239



 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           KD   + I   I    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 130 KDFSKENIMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 182

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 183 LVILPIAIGGGLGYSSEGYLDHILLLQVLIGTMLGAYIGAKFTNYAPRMLLK 234


>gi|42782758|ref|NP_980005.1| hypothetical protein BCE_3708 [Bacillus cereus ATCC 10987]
 gi|42738684|gb|AAS42613.1| membrane protein, putative [Bacillus cereus ATCC 10987]
          Length = 251

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         + + + S + S +   
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGALGSYIGSKIGSLIPGH 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFP-----------DNYVKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +   +  R+             +       G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGMMAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM   G +I ++  T+  V   IA    L               S G++
Sbjct: 155 GIGSAPFIQLGLMFLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +       L   FSMIM
Sbjct: 203 DHILLLQVLIGTMLGAYIGAKFTNYAPSMLLK--FSMIM 239



 Score = 38.5 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           KD   + I   I    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 130 KDFSKENIMKCICLGLVTGMMAGSFGIGSAPFIQLGLMFLL-------GLTIQQSVGTTM 182

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++     L 
Sbjct: 183 LVILPIAIGGGLGYSSEGYLDHILLLQVLIGTMLGAYIGAKFTNYAPSMLLK 234


>gi|323253867|gb|EGA37692.1| hypothetical protein SEEM8282_06879 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
          Length = 265

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 25/235 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +   + L+G +  + G GGGL+ +P L       G+  +     A+ T+       S+
Sbjct: 12  WCLFFVAVLAGFIDSIAG-GGGLLTIPALM----AAGMSPAN----ALATNKLQACGGSL 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S +   R   +N+   K  I +  I ++  +L++ HV    L +   I  + +G+  L 
Sbjct: 63  SSSLYFIRRKVVNLAEQKLNILMTFIGSMSGALLVQHVQADILRQILPILVIFIGLYFLL 122

Query: 144 RDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATS 199
             +L  E   R+        I G   GF  G  G   G F  L  +   G ++ K+TA +
Sbjct: 123 MPKLGEEDRQRRLYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGYNLAKSTAHA 182

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             ++A      LL+ I  G  +     W+ GFV       +L    L   + ++L
Sbjct: 183 KVLNATSNVGGLLLFIIGGKVI-----WATGFV-------MLVGQFLGARMGSRL 225


>gi|225628465|ref|ZP_03786499.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|237817542|ref|ZP_04596532.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|225616311|gb|EEH13359.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|237787297|gb|EEP61515.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
          Length = 301

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/285 (18%), Positives = 95/285 (33%), Gaps = 49/285 (17%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + VA+F +  L G+ G+  G+ +VP+L+  F        I +HVA+  SL  +   S 
Sbjct: 25  LWLFVAAFGASMLGGMLGMASGIFIVPLLTSIF-------GIDIHVAIAASLISVIACSC 77

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S     +    N+++         +       +I  +  ++L   FAI  +L    ML 
Sbjct: 78  GSAAPLLKERLTNIRLAVVLETATTLGAFTGVFLIGVIPTAYLYLMFAIILVLSAWQMLV 137

Query: 144 RDRLYCERKFP--------------------DNYVKYIWGMV---------TGFLSGALG 174
           R R   +   P                      +  Y  G +          G +S  LG
Sbjct: 138 RRREMPQTNRPASRTWATLLRLHSAVPDRSSGKFTSYQVGSLPLGLSLMYGAGLVSALLG 197

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G+     M       I  ++ATS  +  +    +                +  G +N
Sbjct: 198 IGSGVLKIPAMDTALRLPIKVSSATSNFMIGVTGAASAGAY------------FMRGDIN 245

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 +   S+L      ++   I    L I F +++   +   
Sbjct: 246 TAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAIAM 290



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + L +   + +G +S L G+G G++ +P +  A +L        + V+  TS  +I 
Sbjct: 176 VGSLPLGLSLMYGAGLVSALLGIGSGVLKIPAMDTALRL-------PIKVSSATSNFMIG 228

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T   S   +   G IN  I         +  V  + +++ +    L   F I  +L+ I
Sbjct: 229 VTGAASAGAYFMRGDINTAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAI 288

Query: 140 LM 141
            M
Sbjct: 289 AM 290


>gi|254228997|ref|ZP_04922418.1| domain of unknown function, putative [Vibrio sp. Ex25]
 gi|262394735|ref|YP_003286589.1| hypothetical protein VEA_003964 [Vibrio sp. Ex25]
 gi|151938465|gb|EDN57302.1| domain of unknown function, putative [Vibrio sp. Ex25]
 gi|262338329|gb|ACY52124.1| hypothetical protein VEA_003964 [Vibrio sp. Ex25]
          Length = 261

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 94/267 (35%), Gaps = 29/267 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+      
Sbjct: 7   TMLLVLALVAFVAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + +      +          +   + +L++  +   +L K   +  L   + 
Sbjct: 58  ASSTAAFTYYKKRLFKPQCWGRAFVATLVGATLGTLLVDAISTDWLEKGLPLVILAAALY 117

Query: 141 MLKRDRLYCERKFPDN-------YVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASI 192
            +     +   + P           +Y+ G+  GF  G  G G G F T   M  Y  +I
Sbjct: 118 TVFHKTPHSPHQSPIPEPCPKLHRKQYMQGLSIGFYDGLAGPGTGAFWTVSSMALYRLNI 177

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A+  +  ++    F +L+                LG +N    L +    +    +  
Sbjct: 178 LLASGLAKAMNFTSNFTSLITFAV------------LGHINWVLGLTMGVCLMAGAFVGA 225

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             +   G K++   F  ++   +   A
Sbjct: 226 HSAIRFGSKFIRPVFVTVVSILAIKLA 252


>gi|113475233|ref|YP_721294.1| hypothetical protein Tery_1540 [Trichodesmium erythraeum IMS101]
 gi|110166281|gb|ABG50821.1| protein of unknown function DUF81 [Trichodesmium erythraeum IMS101]
          Length = 305

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  I  +   +G L+G  G+GGG+VM+PVL       G         A+GT+   I  T+
Sbjct: 6   LLYISFSGLFAGVLAGFLGIGGGVVMIPVLVTL----GYQPVQ----AVGTTTLSILITA 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   +++ + G + +  +    F   IT  +   + +     +L  AF +F +L   L+ 
Sbjct: 58  ISGSIQNLQMGNLTISRVIAIGFPALITAQLGVYLENQFSSRWLLFAFGLFLILNIYLVE 117

Query: 143 KRDRLYCERK 152
            R ++   +K
Sbjct: 118 FRKQVTKRKK 127



 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 12/111 (10%)

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           G+  G L+G LG+GGG+    +++  G    +A  T+     + A    +  +  G    
Sbjct: 13  GLFAGVLAGFLGIGGGVVMIPVLVTLGYQPVQAVGTTTLSILITAISGSIQNLQMGNLTI 72

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
                         V+ I   +++   L   L      ++L   F + +  
Sbjct: 73  SR------------VIAIGFPALITAQLGVYLENQFSSRWLLFAFGLFLIL 111



 Score = 42.4 bits (99), Expect = 0.077,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 38/97 (39%), Gaps = 7/97 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+               + VA+ TSLGVI  T+  + + H   G +  +      F
Sbjct: 209 VILVPLQILLL-------GEKIKVAIPTSLGVIVITAFSACIGHAVRGNVLWETGLLLGF 261

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              +    ++  +  +    ++ AF     ++ I + 
Sbjct: 262 SGLLGVQFSTRSMKKLPDEVISFAFRALLAIISIYIF 298


>gi|242240009|ref|YP_002988190.1| hypothetical protein Dd703_2591 [Dickeya dadantii Ech703]
 gi|242132066|gb|ACS86368.1| protein of unknown function DUF81 [Dickeya dadantii Ech703]
          Length = 267

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 99/238 (41%), Gaps = 25/238 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + ++ V S ++G +  + G GGGL+ +P L  A    G+  +      + T+      
Sbjct: 9   NMLGILFVVSVVAGFIDSIAG-GGGLLAIPALLTA----GLSPAQV----LATNKLQAVG 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R   ++MK+L   + +  I  +  + +I  +   FL K   +  + +G+ 
Sbjct: 60  GSFSASLYFIRRKAVDMKLLTLAVPMTLIGAMFGAWLIQQIHADFLRKLLPVLVIGIGLY 119

Query: 141 MLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L   ++  E    +        + G   GF  G  G G G F  L  +   G ++ KAT
Sbjct: 120 FLLMPKVGDEDRHARLSTFTFSLLGGCCVGFYDGFFGPGAGSFYALAYVTLLGFNLAKAT 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A +  ++    F +LL  +  G  +     WS+G       L++L   I+   L  ++
Sbjct: 180 AHAKVLNFTSNFGSLLFFVLGGQVI-----WSIG-------LVMLVGQIIGARLGARM 225


>gi|229151869|ref|ZP_04280067.1| hypothetical protein bcere0011_34100 [Bacillus cereus m1550]
 gi|228631574|gb|EEK88205.1| hypothetical protein bcere0011_34100 [Bacillus cereus m1550]
          Length = 245

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 86/219 (39%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G +   I         I + + S   S +   
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVVSHYREGNVAFIIGGIVGGFGAIGSYIGSKFGSLIPAH 88

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +  ++  ++    Y                G+VTG ++G+ 
Sbjct: 89  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKEFSMNYLLKCICLGLVTGMMAGSF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+    +I ++  T+  V   IA    L     G+  N L        
Sbjct: 149 GIGSAPFIQLGLMVLLRLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDNIL-------- 200

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
               +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 201 ----LLQVLIGTMLGAYIGAKFTNYAPRMLLR--FSMIM 233



 Score = 41.2 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K+  ++Y+   I    ++G ++G FG+G    +   L    +L        +  ++GT++
Sbjct: 124 KEFSMNYLLKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLLRL-------TIQQSVGTTM 176

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 177 LVILPIAIGGGLGYSSEGYLDNILLLQVLIGTMLGAYIGAKFTNYAPRMLLR 228


>gi|70730629|ref|YP_260370.1| hypothetical protein PFL_3265 [Pseudomonas fluorescens Pf-5]
 gi|68344928|gb|AAY92534.1| membrane protein, putative [Pseudomonas fluorescens Pf-5]
          Length = 259

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 95/264 (35%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ + +F++G +  + G GGGL+  P L  A         +  H+ +GT+     
Sbjct: 9   LTTLAILALVAFIAGFIDAIAG-GGGLLTTPALLTA--------GLPPHLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     I    +  +  +++  ++   +LNK   +     G+
Sbjct: 60  FGSATASFTFYRRKLFHPRQWTHAIVGTLVGALTGAIVAHYLPAEWLNKMLPVIVFACGL 119

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G   GF  G  G G G F T   +L Y   + KA
Sbjct: 120 YLLFGGTPKAPLDSDAPIKKKWQSSQGFSLGFYDGVAGPGTGAFWTVSSLLLYPIDLVKA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V ++SG             V+    L +    ++      + +
Sbjct: 180 SGVARSMNFVSNIAALSVFVFSGQ------------VDWIIGLCMGLSVMVGAFFGARTA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 ISGGAKFIRPVFITVVLGLTVRLA 251


>gi|223939838|ref|ZP_03631708.1| protein of unknown function DUF81 [bacterium Ellin514]
 gi|223891526|gb|EEF58017.1| protein of unknown function DUF81 [bacterium Ellin514]
          Length = 268

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 104/259 (40%), Gaps = 25/259 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++     ++G +  + G GGGL+ +PV    +  +G+        A+GT+       S
Sbjct: 17  FPILFATGLIAGFVDSIAG-GGGLITLPV----WLSVGMPPQY----ALGTNKLQATFGS 67

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R G ++++     +F   I     ++++  +D SFL +   +  L +   ++
Sbjct: 68  GSAAWHYTRAGIVSLRECSLGVFFTLIGAAAGTVLVQKLDPSFLKRFIPVLLLGIVAYII 127

Query: 143 KRDRLYCERKFP---DNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
            + R+  +   P   +     I+G+V GF  G  G G G    + LML  G ++ KATA 
Sbjct: 128 FKPRIGDKDVHPRISNKPFYIIFGLVLGFYDGFFGPGAGSLWTMALMLGLGFNLTKATAY 187

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++      +L+               S G +   A L +    +L   + + +    
Sbjct: 188 TKVMNLASNACSLIFFA------------SAGHIYYLAGLSMGLGQLLGARVGSHMVVRK 235

Query: 259 GKKYLTIGFSMIMFTTSFV 277
           G  ++   F  ++   +  
Sbjct: 236 GTGFIRPIFISMVLAITIK 254


>gi|268324646|emb|CBH38234.1| hypothetical membrane protein [uncultured archaeon]
          Length = 252

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 96/260 (36%), Gaps = 24/260 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + + I     +G +SG+FG+GGG V +P+L+ A   +          A G +L ++ 
Sbjct: 9   ITLVIIYICIGLFAGFMSGMFGIGGGAVRIPLLNLAGLPL--------LSAFGINLFIVP 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S++  +   +   I+ +I            ++ + +   +    L   F    +L+  
Sbjct: 61  FSSLVGAVS--QRANIDKEIALYLAVGGVFGALIGAFLAGLIPTFILAIIFFALSILIAF 118

Query: 140 LMLKRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            +     +     R    +   +    +  F++   G   G      +   G  I+KA A
Sbjct: 119 GIFLDRIVPALAHRINFTHRDVFASSFLLSFIAAIRGGSAGSLFPAFLKAIGCDIHKAIA 178

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS  V+      A  +             WS G +     +  L  S++   L + +S  
Sbjct: 179 TSLCVTIFTCIGAAAIF------------WSRGDIIWWPAIFALLGSMIGARLGSAVSLK 226

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
               +L IG  M++   + +
Sbjct: 227 TKSIWLEIGLGMLVVALALI 246


>gi|241895908|ref|ZP_04783204.1| permease [Weissella paramesenteroides ATCC 33313]
 gi|241870951|gb|EER74702.1| permease [Weissella paramesenteroides ATCC 33313]
          Length = 257

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 84/203 (41%), Gaps = 14/203 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              +++A  + G  + + G G G + V +L+  F +  +       VA  TSL  + P +
Sbjct: 3   FLYLVIAGVIMGGFTVITGGGAGALYVSILTLGFNVSPV-------VATATSLATMFPVA 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +S   H + G IN KI    I    I  ++ S   + +  +  N+      +L+ +LM+
Sbjct: 56  AISSGLHAKSGNINFKIGWIMIGWGTIGALIGSYFSNDIPTNHYNRLIGSIIILLTVLMI 115

Query: 143 KRDRLYCERKFPDNYV-------KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + R   +      +           +G+++G LSG +G  G       +   G + ++ 
Sbjct: 116 IKKRQPVKLVKSVYHSNKYTFCQTSFFGIISGLLSGLVGTSGTTTIIAGLTLLGCTTFQT 175

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             TS  V + I+    + R  SG
Sbjct: 176 VGTSVFVLSGISLVGFIARATSG 198


>gi|309775188|ref|ZP_07670200.1| conserved hypothetical protein [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308917143|gb|EFP62871.1| conserved hypothetical protein [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 255

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 106/265 (40%), Gaps = 25/265 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++    +  +A   +G  +G  G+    V+ P+L      +G++     ++A+G +L   
Sbjct: 1   MLYTFLICFIAGIGAGLGTGFAGMSAAAVISPMLI---TFLGMEP----YMAVGIALASD 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              S +S   + +H  ++++     +  + + T+V S + + V  + +        LL+G
Sbjct: 54  VLASAVSAYTYGKHDNLDIRNGIVMMIFVLLFTLVGSYVSALVPGTAMGGFSTFMTLLLG 113

Query: 139 ILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
           I  + R  +  +        +       I G + GF+ G +G GGG+   L++    G  
Sbjct: 114 IKFIVRPVMTTKSSMEQTNPRKRLLQSMICGAMVGFICGFIGAGGGMMMLLILTSVLGYE 173

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           +  A  TS  + A  AF         G    G+P  +       A+++ +  ++L   +A
Sbjct: 174 LKTAVGTSVFIMAFTAFTGAASHFTIG----GMPDMT-------ALILCIASTLLWARIA 222

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSF 276
            + +     K L     +++     
Sbjct: 223 ARFANKASAKTLNRATGVVLTVLGI 247


>gi|90407709|ref|ZP_01215888.1| hypothetical membrane spanning protein [Psychromonas sp. CNPT3]
 gi|90311178|gb|EAS39284.1| hypothetical membrane spanning protein [Psychromonas sp. CNPT3]
          Length = 274

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 50/287 (17%), Positives = 104/287 (36%), Gaps = 31/287 (10%)

Query: 1   MYDLLYNFSLMVFLSKDCVV---DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQ 57
           M D L  F++   ++   ++     + L+     L+G +  + G GGGL+ VP L     
Sbjct: 1   MLDALPPFNIQFEVNMTELLLDPSNLFLLASVGLLAGFIDAIVG-GGGLLTVPTLLSL-- 57

Query: 58  LMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM 117
                  +  H+ +GT+    +  S  +   + +    +    K   +   I  +  +L+
Sbjct: 58  ------GLSPHLTLGTNKLAASFGSATAAFTYFKKNLFDPVFWKHSFYSSLIGALAGTLV 111

Query: 118 ISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD------NYVKYIWGMVTGFLSG 171
           I+ ++  +L+K   +    + +  L       + +          + +     + GF  G
Sbjct: 112 INAIEAPWLDKFLPVLIFCVALYTLFNRLHDIDNQTLPAITPDFKFKQKCQAFILGFYDG 171

Query: 172 ALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
             G G G F  +  M  Y  +I  A+  +  ++      AL V IY G            
Sbjct: 172 VSGPGTGAFWVISSMRLYQLNILLASGLAKAMNFTSNITALCVFIYFGQ----------- 220

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            VN    L +    ++ + +    +   G K++   F  ++   S  
Sbjct: 221 -VNWIIGLTMGGCIMIGSYIGAHSAIRFGGKFIRPIFICVVLIMSLK 266


>gi|34541225|ref|NP_905704.1| hypothetical protein PG1572 [Porphyromonas gingivalis W83]
 gi|34397541|gb|AAQ66603.1| membrane protein, putative [Porphyromonas gingivalis W83]
          Length = 268

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 7/124 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            LI++   + GTL+GL G GGG +++P L            + M  A+GTSL +I+  S+
Sbjct: 150 ALILLEGIVVGTLTGLVGAGGGFLIIPALVFL-------GGLPMKQAIGTSLVIISAKSL 202

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + F+       ++  +L        I   +   +  ++D   L  AF  F  +MG+ ++ 
Sbjct: 203 LGFLGENNPAGLDWGLLLSVTAFAIIGIFIGMKLSQYIDGDKLKPAFGWFVFVMGLYIIL 262

Query: 144 RDRL 147
           ++ +
Sbjct: 263 KETI 266



 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 94/253 (37%), Gaps = 41/253 (16%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VPVL      MGID      +    SL ++  TSV+  + + R   ++++    +   
Sbjct: 26  LTVPVLVYL---MGIDPV----LGTAYSLFIVGATSVVGSISYFRRSLVDVRTAVLFGLP 78

Query: 107 LPITTVVT-SLMISHVDKSFLN-------------KAFAIFCLLMGILMLKRDRLY---- 148
                 +T + ++  + +  L+               FA+  L   + M++  ++     
Sbjct: 79  SIFAVFLTRAYLVPAIPECVLSPGSFAIDRNMLLMLLFAVLMLTASVSMIRPAKMQEKAS 138

Query: 149 ---CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSA 204
               + K P   +  + G+V G L+G +G GGG      ++F  G  + +A  TS  + +
Sbjct: 139 QRPPKPKQPRYALILLEGIVVGTLTGLVGAGGGFLIIPALVFLGGLPMKQAIGTSLVIIS 198

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
             +    L            P      ++ G +L +   +I+   +  KLS  I    L 
Sbjct: 199 AKSLLGFLG--------ENNPAG----LDWGLLLSVTAFAIIGIFIGMKLSQYIDGDKLK 246

Query: 265 IGFSMIMFTTSFV 277
             F   +F     
Sbjct: 247 PAFGWFVFVMGLY 259


>gi|73663712|ref|YP_302493.1| hypothetical protein SSP2403 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72496227|dbj|BAE19548.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 303

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 55/263 (20%), Positives = 92/263 (34%), Gaps = 26/263 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +A FL+  + G  G+G G       S      GI  +    +A  T      
Sbjct: 1   MHKLFIFALAGFLAQLIDGSLGMGFGA----SSSSILLTFGIAPA----IASATIHFSEI 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H +   ++   +        IT+ + +  +SH+    +    AIF L MGI
Sbjct: 53  ATTAASGTSHLKFENVHKPTMIKLAIPGAITSFIGAAFLSHIHSDLIKPFIAIFLLTMGI 112

Query: 140 LMLKR---DRLYCERKFPDNYVKYIW---GMVTGFLSGALGVGGGIFTNLLMLFY-GASI 192
            +L +    R     K P    +Y     G V GFL    G G G     L+L       
Sbjct: 113 YILYQFLYKRHQTVVKDPSTIGRYAMIPQGAVAGFLDAIGGGGWGPVNTPLLLAQKKLEP 172

Query: 193 YKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
             A  T +     +   A +  I   GW            +N G V+ +    ++  P A
Sbjct: 173 RYAIGTVSASEFFVTISASISFIIFLGWSQ----------INWGLVIALSIGGLIAAPFA 222

Query: 252 TKLSYMIGKKYLTIGFSMIMFTT 274
             L  ++    L +    ++  T
Sbjct: 223 ACLVKILPMNILAVCVGGLIIFT 245


>gi|149925446|ref|ZP_01913710.1| hypothetical protein LMED105_04462 [Limnobacter sp. MED105]
 gi|149825563|gb|EDM84771.1| hypothetical protein LMED105_04462 [Limnobacter sp. MED105]
          Length = 258

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 85/214 (39%), Gaps = 15/214 (7%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
             +A GT+L ++ P  ++ +  + +H  +    +        ITT +T+ +   +D++ L
Sbjct: 46  QALAQGTALVLMVPNLLIGWWRYNQHHKLPWLAVAAIGITATITTWLTAKLAVRLDQNLL 105

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERK----FPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
           +  F +F L +G+ ML   +           P      I G++ G   G LG+GGG+   
Sbjct: 106 HWIFNLFILAVGLRMLLLRKNPSANSDNSDQPRTATMPIVGVLGGTSMGLLGMGGGLVAT 165

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            ++            T+  +S  +  P+ +    + +       W LG       L +  
Sbjct: 166 PMLT---TVFKHTQTTAQALSLALVAPSSV-MALTTYANAHRVNWELG-------LPLAF 214

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
             +        +++ + +K L   F+ +M   +F
Sbjct: 215 GGLFTVSAGVAIAHYLPEKALRRSFAAVMIVAAF 248



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 40/99 (40%), Gaps = 7/99 (7%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V  P+L+  F+            A   SL ++AP+SVM+   +     +N ++     F 
Sbjct: 163 VATPMLTTVFK-------HTQTTAQALSLALVAPSSVMALTTYANAHRVNWELGLPLAFG 215

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              T      +  ++ +  L ++FA   ++    ++ + 
Sbjct: 216 GLFTVSAGVAIAHYLPEKALRRSFAAVMIVAAFWLILQS 254


>gi|325122087|gb|ADY81610.1| hypothetical protein BDGL_001024 [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 295

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 94/278 (33%), Gaps = 44/278 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  L G   G+ GVGGG +M P+L   F+       I  H+A+GT L   A +    
Sbjct: 7   FILAGMLVGFCVGITGVGGGSLMTPILISLFR-------IEPHIAIGTDLLYAAISKFCG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
            M H R   I   I+          + +TS ++ H           L         L G+
Sbjct: 60  SMVHARKLNIVWPIVLWLAVGSIPASFITSWVLEHYLSQSTHYKAVLTMVLGFMLTLTGV 119

Query: 140 LMLKRDRLYCERK-----------------FPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++ R R+                              I G++ G       VG G F  
Sbjct: 120 SIIFRTRIEKFFNKFRSKEVTQTENEQLAIHKKRSFIVIMGIILGVFVTLSSVGAGAFGI 179

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
           + ++       + +   +    + L+              + GL   S G V+   ++ +
Sbjct: 180 MALVIMFPNLPMIRIIGSDVVHAVLLTL------------VAGLGHMSAGNVDFTLLMWL 227

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L  SI    + T +S  + ++ +     + +F     F
Sbjct: 228 LVGSIPAIIIGTLISSRMPERLIRKILGITLFALGVNF 265



 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 49/130 (37%), Gaps = 7/130 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            I++   + G    L  VG G   +  L   F       ++ M   +G+ +      +++
Sbjct: 155 FIVIMGIILGVFVTLSSVGAGAFGIMALVIMF------PNLPMIRIIGSDVVHAVLLTLV 208

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-MLK 143
           + + H   G ++  +L   +       ++ +L+ S + +  + K   I    +G+  M+ 
Sbjct: 209 AGLGHMSAGNVDFTLLMWLLVGSIPAIIIGTLISSRMPERLIRKILGITLFALGVNFMVH 268

Query: 144 RDRLYCERKF 153
             +   +   
Sbjct: 269 PVKAKPKAPV 278


>gi|319400303|gb|EFV88538.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
          Length = 299

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 87/259 (33%), Gaps = 24/259 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +A FL+  + G  G+G G       S      GI  ++       T       T+
Sbjct: 4   VLIFAIAGFLAQLVDGSLGMGFGA----SSSSILLTYGIAPAVV----SATVHFSEIATT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H R   ++   +        I+  + + +++ +   ++    A+F L MG  +L
Sbjct: 56  AASGTSHWRFDNVHKPTMLKLAIPGSISAFIGAGVLTFIHGDYIKPFIALFLLSMGFYIL 115

Query: 143 KRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKA 195
            +       +         ++     G V GFL    G G G     L+L         A
Sbjct: 116 YQFLFKRAHEHHHHVGDLSSFKVIPQGFVAGFLDAIGGGGWGPVNTPLLLSSKKIQPRYA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T +     +   A L  I             +  +N  AV+ +    ++  P++  L 
Sbjct: 176 IGTVSASEFFVTSSAALSFIIF---------LGITQINWFAVIALSLGGMVAAPISAYLV 226

Query: 256 YMIGKKYLTIGFSMIMFTT 274
            ++    L I    ++  T
Sbjct: 227 KVLPINILAICVGGLIIFT 245


>gi|160943479|ref|ZP_02090712.1| hypothetical protein FAEPRAM212_00969 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445158|gb|EDP22161.1| hypothetical protein FAEPRAM212_00969 [Faecalibacterium prausnitzii
           M21/2]
          Length = 261

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 92/260 (35%), Gaps = 25/260 (9%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           + K  ++  + +   A   +G  +G  G+    V+ P+L     +          +A+G 
Sbjct: 1   MDKMHLLFTVLVTFFAGMGAGLGTGFAGMSAAAVISPMLITFLHMDPY-------MAVGI 53

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +L      S +S   + ++  +++K     +  +   TVV S + S +  + +       
Sbjct: 54  ALSSDVLASAVSAYTYHKNKNLDIKNGLIMMASVLAFTVVGSWVASKMPSATMGGFSVFM 113

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLML- 186
             L+GI  + R  +  +        +       + G++ GF+ G +G GGG+   L++  
Sbjct: 114 TFLLGIKFILRPVMTTKEAMQGVSAQKRAVQSVVCGVLIGFICGFIGAGGGMMMLLILTS 173

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
             G  +  A  TS  +    A    +     G   +                + +  ++L
Sbjct: 174 VLGYELKTAVGTSVFIMTFTALTGAVSHFMIGGTPD-----------WLVWGLCVVFTLL 222

Query: 247 ITPLATKLSYMIGKKYLTIG 266
              +A   +     K L   
Sbjct: 223 WARIAAVFANKATPKTLNRA 242


>gi|205375097|ref|ZP_03227888.1| hypothetical protein Bcoam_18967 [Bacillus coahuilensis m4-4]
          Length = 256

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 102/262 (38%), Gaps = 17/262 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    LI +  F+   +SG+ G+GG ++  P+L     ++G   +   H   G S   + 
Sbjct: 1   MALSLLIFLIGFIGSFISGMVGIGGSIIKYPMLLYIPPVLGY-MAFTAHEVSGISAVQVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++     +R+ G +N +++      + I + +     + + ++ +N  + I      +
Sbjct: 60  FATIGGVWAYRKGGYLNKQLILYMGTAILIGSFIGGYGSTLLSENGVNVVYGILAATAAV 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI----FTNLLMLFYGASIYKA 195
           +M    R          + K+I   +   +    G+ G         ++++         
Sbjct: 120 MMFLPKRGDDLGSGEVTFSKWIASSLAFIVGVGAGIVGAAGAFLLVPIMLVVLKIPTRMT 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            A+S  ++ + +  + + ++ +G             V  G  LI++  S++ +PL  K  
Sbjct: 180 IASSLAITFISSIGSTVGKVMTGQ------------VLFGPALIMVIASLIASPLGAKAG 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
             +  K L    ++++  T+  
Sbjct: 228 QKVNTKLLQWILAILIAGTAVK 249


>gi|15920362|ref|NP_376031.1| hypothetical protein ST0183 [Sulfolobus tokodaii str. 7]
 gi|15621144|dbj|BAB65140.1| 262aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 262

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 80/202 (39%), Gaps = 15/202 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  +I+     G L+G+ G  G L++VP LS           +  + ++G+SL V   T+
Sbjct: 12  IYFLILIGISVGILTGITGSSGVLIVVPALSYL--------GLSYYDSIGSSLLVDVITT 63

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +     + ++G ++ ++         +   + S +   V +  L  +F IF   M  +  
Sbjct: 64  LSVIFVYFKNGNVDYRVSLLLGLGAVVGAQLGSRIAFAVPEKGLEASFTIFTSYMAYMSF 123

Query: 143 KRDR------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           KR R         E     + +     M+ G ++G LG  GGI    ++ML +   I + 
Sbjct: 124 KRSRNPKLNIKRIEIGKTKSLIAIFLAMIIGIVTGTLGASGGIMFIAVMMLLFSIDIKRM 183

Query: 196 TATSAGVSALIAFPALLVRIYS 217
             T+       A       I +
Sbjct: 184 IGTATLAMLFSAISGTTAYISA 205


>gi|228992361|ref|ZP_04152292.1| hypothetical protein bpmyx0001_31030 [Bacillus pseudomycoides DSM
           12442]
 gi|228767386|gb|EEM16018.1| hypothetical protein bpmyx0001_31030 [Bacillus pseudomycoides DSM
           12442]
          Length = 251

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 60/251 (23%), Positives = 102/251 (40%), Gaps = 31/251 (12%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II+  FL G L G  G GG   ++ VL+  F        + +H+A+ TSL  +A T++  
Sbjct: 3   IIITMFLMGILLGFVGAGGAGFIIAVLTLVFH-------VPIHIALATSLTAMAFTTLSG 55

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + H R   + MKI         + + V S + + +    L+   A    L  I ML R 
Sbjct: 56  VISHYRERNVVMKIGCVVGGFGALGSYVGSKIGAGIPAQLLHWFTAGMLFLSAICMLVRL 115

Query: 146 RLYCERKFPDNYVK-----------YIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIY 193
                +K     +             + G+ TG L+GA G+G   F  L LM+  G SI+
Sbjct: 116 FFVQNQKELSASLSDQLSPYVLGKGAMLGIATGILAGAFGIGSAPFIQLGLMVLLGLSIH 175

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           ++  T+  V   IA    +               S G+++   ++ +L  ++L   +  K
Sbjct: 176 QSVGTTMLVILPIAIGGGVGYT------------SAGYLDYMLLVQVLMGTMLGAYIGAK 223

Query: 254 LSYMIGKKYLT 264
            +    +  L 
Sbjct: 224 FTNYAPRIILR 234


>gi|168465906|ref|ZP_02699776.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|195631247|gb|EDX49807.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
          Length = 269

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 95/237 (40%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLVVLFFVAVLAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S +   R   +N+   K  I +  I ++  +L++ HV    L +   I  + +G+  
Sbjct: 65  SLSSSLYFIRRKVVNLAEQKLNILMTFIGSMSGALLVQHVQADILRQILPILVIFIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G   G F  L  +   G ++ K+TA
Sbjct: 125 LLMPKLGEEDRQRRLYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGYNLAKSTA 184

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++A      LL+ I  G  +     W+ GFV       +L    L   +  +L
Sbjct: 185 HAKVLNATSNVGGLLLFIIGGKVI-----WATGFV-------MLVGQFLGARMGARL 229


>gi|30021770|ref|NP_833401.1| hypothetical protein BC3673 [Bacillus cereus ATCC 14579]
 gi|296504173|ref|YP_003665873.1| hypothetical protein BMB171_C3343 [Bacillus thuringiensis BMB171]
 gi|29897326|gb|AAP10602.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579]
 gi|296325225|gb|ADH08153.1| hypothetical protein BMB171_C3343 [Bacillus thuringiensis BMB171]
          Length = 251

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         I + + S   S +   
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +  ++  ++    Y                G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKEFSMNYLLKCICLGLVTGMMAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 203 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR--FSMIM 239



 Score = 40.8 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K+  ++Y+   I    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 130 KEFSMNYLLKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 182

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 183 LVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR 234


>gi|295402485|ref|ZP_06812437.1| protein of unknown function DUF81 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312110810|ref|YP_003989126.1| hypothetical protein GY4MC1_1741 [Geobacillus sp. Y4.1MC1]
 gi|294975506|gb|EFG51132.1| protein of unknown function DUF81 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311215911|gb|ADP74515.1| protein of unknown function DUF81 [Geobacillus sp. Y4.1MC1]
          Length = 294

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 94/263 (35%), Gaps = 26/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++  F++  + G  G+  G+      +      GI  +    VA  +       T+
Sbjct: 4   LIVFVIVGFIAQLIDGSLGMAYGVTS----TTLLLAFGITPA----VASASVHLAEVVTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H + G ++  ++   I    +   V +  +S++    +    ++F L +G  ++
Sbjct: 56  AASGASHIKFGNVDRDMVLKLIVPGSLGAFVGACFLSNLPGDLIKPYVSLFLLALGFYIM 115

Query: 143 KRDRLYCERKFPDNYVKYI------WGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKA 195
            R      R+      K+        G+V GFL    G G G  +  ++L   G    K 
Sbjct: 116 YRFLFLSARQEQQTPRKFSNKQLVPLGLVAGFLDATGGGGWGPISTPVLLANKGIEARKV 175

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             T       +A  A +  + S GW            VN   V  ++   I+  P+A  L
Sbjct: 176 VGTVDTSEFAVALSATIGFVISLGWEQ----------VNWFWVGTLMLGGIIAAPIAAWL 225

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +    L +    ++  T+  
Sbjct: 226 VRKLPSHLLGVLVGGLIIFTNAR 248



 Score = 37.0 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 47/138 (34%), Gaps = 4/138 (2%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++    ++G L    G G G +  PVL       GI+    +   + TS   +A ++ + 
Sbjct: 138 LVPLGLVAGFLDATGGGGWGPISTPVL---LANKGIEARKVVGT-VDTSEFAVALSATIG 193

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           F+       +N   +   +    I   + + ++  +    L        +      L + 
Sbjct: 194 FVISLGWEQVNWFWVGTLMLGGIIAAPIAAWLVRKLPSHLLGVLVGGLIIFTNARTLLQA 253

Query: 146 RLYCERKFPDNYVKYIWG 163
               ++ +   Y   + G
Sbjct: 254 WEAPDKWYSAVYSIIVIG 271


>gi|163857468|ref|YP_001631766.1| hypothetical protein Bpet3156 [Bordetella petrii DSM 12804]
 gi|163261196|emb|CAP43498.1| putative membrane protein [Bordetella petrii]
          Length = 260

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 82/243 (33%), Gaps = 32/243 (13%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + +P L            +   +A GT+L ++ PT VM+  ++ +H  I+          
Sbjct: 31  IAIPALVLLM-------DMSQQLAQGTALIMVLPTIVMAVRKYNQHTRIDRPAAIAGAIG 83

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY-IWGMV 165
             + T V + +   +    L  +FA+F   + +  + +              +       
Sbjct: 84  AVLFTWVGARLALGIPSGTLRLSFAVFLFFVAVFYVYKIARAPRPAAKGRARQARPAPAF 143

Query: 166 TGFLSGALGVGG-----------GIFTNLLML-FYGASIYKATATSAGVSALIAFPALLV 213
           T   +  LGV              +    ++   +      A A +  +    +  AL  
Sbjct: 144 TRGRAALLGVASGTLGGFFGVGGAVMAVPILTSVFRLPQTSAQALALTMVIPGSTIALAT 203

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
             ++G              N    L +   S+L  P+  +++Y + ++ L   F+ ++F 
Sbjct: 204 YSWAGQA------------NWWIGLPLAAGSLLFVPVGVRVAYRLPERKLRACFAAMLFA 251

Query: 274 TSF 276
           T  
Sbjct: 252 TVL 254


>gi|224541699|ref|ZP_03682238.1| hypothetical protein CATMIT_00871 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525387|gb|EEF94492.1| hypothetical protein CATMIT_00871 [Catenibacterium mitsuokai DSM
           15897]
          Length = 258

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 96/267 (35%), Gaps = 25/267 (9%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            V+  I +   A   +G  +G  G+    V+ P+L     +          +A+G +L  
Sbjct: 2   TVLMTILVTFFAGMGAGLGTGFAGMSAAAVISPMLITFLGMKPY-------MAVGIALSS 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
               S  S  E+ ++  ++++     +  +   TVV S + S V  + +        +L+
Sbjct: 55  DVLASAASAYEYGKNKNLDIRNGLIMMVSVLCFTVVGSYISSLVPAATMGNFSVFMTMLL 114

Query: 138 GILMLKRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGA 190
           GI  + R  +  +                I G++ GF+ G +G GGG+   L++    G 
Sbjct: 115 GIKFILRPVMTTKESMEAVSPQKRAIQSVICGVIIGFICGFIGAGGGMMMLLILTSVLGY 174

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            +  A  TS  +    A    +     G   +            G  ++ +  + +   +
Sbjct: 175 ELKTAVGTSVFIMTFTALTGAVSHFAIGGTPD-----------WGVWILCVIFTFIWARI 223

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           A + +     + L     +I+     V
Sbjct: 224 AARFANKATPETLNRVTGIILVILGVV 250



 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 55/135 (40%), Gaps = 12/135 (8%)

Query: 9   SLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMH 68
           S+     +   +  +   ++  F+ G +    G GGG++M+ +L+             + 
Sbjct: 129 SMEAVSPQKRAIQSVICGVIIGFICGFI----GAGGGMMMLLILTSVL-------GYELK 177

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTI-NMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            A+GTS+ ++  T++   + H   G   +  +    +    I   + +   +      LN
Sbjct: 178 TAVGTSVFIMTFTALTGAVSHFAIGGTPDWGVWILCVIFTFIWARIAARFANKATPETLN 237

Query: 128 KAFAIFCLLMGILML 142
           +   I  +++G+++ 
Sbjct: 238 RVTGIILVILGVVVF 252


>gi|167855976|ref|ZP_02478723.1| DNA-binding transcriptional regulator OxyR [Haemophilus parasuis
           29755]
 gi|219871886|ref|YP_002476261.1| permease [Haemophilus parasuis SH0165]
 gi|167852913|gb|EDS24180.1| DNA-binding transcriptional regulator OxyR [Haemophilus parasuis
           29755]
 gi|219692090|gb|ACL33313.1| permease [Haemophilus parasuis SH0165]
          Length = 268

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 102/261 (39%), Gaps = 11/261 (4%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I ++I    L+  +S LFG+GGG++MVP+L   F          + +   TSL  + 
Sbjct: 3   ITTILILIACGILTNLMSALFGIGGGVLMVPILHTLF------PEFSLQMVAATSLMTVM 56

Query: 80  PTSVMS-FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            T+ ++    +++   + MK L  W   + I   +   +   +    +   F    +++ 
Sbjct: 57  GTAAINLVYFYKQRVPVKMKSLLLWSIGMIIGVQLGFEISFFIPNWAIVAVFVTTLVVLA 116

Query: 139 ILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYK 194
           + ++   +           +N       +  G ++G  G+GGG     L+        ++
Sbjct: 117 LCLILAKKSENSTACSSLKENIKGISVCLFGGSVAGITGIGGGSIMAPLISLLPSVKPHQ 176

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             A S  +  +     L   +     +     W +G+VN   V I++  S L +  + KL
Sbjct: 177 IAAYSNYMMIIGGLGNLYGYLSKIPPVYLENSWQVGYVNFTVVSIVVLCSFLTSFFSMKL 236

Query: 255 SYMIGKKYLTIGFSMIMFTTS 275
             ++    +    S I+   +
Sbjct: 237 RGILKPLTMQRLLSGILLVIA 257


>gi|222084814|ref|YP_002543343.1| permease protein [Agrobacterium radiobacter K84]
 gi|221722262|gb|ACM25418.1| permease protein [Agrobacterium radiobacter K84]
          Length = 308

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 50/292 (17%), Positives = 99/292 (33%), Gaps = 56/292 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   I +I+      G LSG+FGVGGG ++ P+L           +I   V
Sbjct: 1   MTIYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPVV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KS 124
           A+ T    +  +S+   + H R GT++MK+    +        V   + S +        
Sbjct: 53  AVATGANQVVASSISGAITHFRRGTLDMKLGSVLLIGGLSGATVGIWIFSLLRRIGQLDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
           F++  + +F   +G LML                                + R    + +
Sbjct: 113 FISLLYVVFLGTIGGLMLWESLNAMRRAARNEPAAPRRPGHHSWVHRLPLKMRFKKSKIY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G   G L+  +GVGGG      M++           TS      +     +
Sbjct: 173 LSVIPVIALGFGIGILTSVMGVGGGFIMVPAMIYLLRIPTNVVVGTSLFQIIFVTAYTTI 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           V+  + +            V+I    +++   ++      ++   +  + L 
Sbjct: 233 VQAATNYS-----------VDIVLAFLLMVAGVIGAQYGVRVGQKLRGEQLR 273


>gi|182413131|ref|YP_001818197.1| hypothetical protein Oter_1312 [Opitutus terrae PB90-1]
 gi|177840345|gb|ACB74597.1| protein of unknown function DUF81 [Opitutus terrae PB90-1]
          Length = 253

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 99/260 (38%), Gaps = 25/260 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  L+ V   ++GT+  + G GGGL+ VP L            + + +A+GT+    +  
Sbjct: 7   HYALLFVVGLVAGTVDAVAG-GGGLITVPALLNL--------GLPVPLALGTNKFQSSFG 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           SV + +   +   + +      I    I   + +  +  +D   L          + +  
Sbjct: 58  SVSASVHFVQRRAVRLSECWFGITATLIGAFLGAFAVQQIDADLLKHVVPWLLAAILLYT 117

Query: 142 LKRDRLYCERKFP---DNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATA 197
           L R  +  +   P         ++G+  GF  G  G G G F    L+L  G +  +ATA
Sbjct: 118 LLRPAIGTQDHPPKMSTGVFYGVFGLGLGFYDGFFGPGTGSFWAIALVLLLGQNFTRATA 177

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T+  ++A     +L +   +G             V++GA + +    ++   L   L   
Sbjct: 178 TTKVMNATSNVASLALFAVAGL------------VHLGAGVAMAAGQLIGGRLGAHLVMT 225

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
            G +++   F  ++  T   
Sbjct: 226 RGARFIRPVFLTMVTLTLAR 245


>gi|52548408|gb|AAU82257.1| conserved hypothetical protein [uncultured archaeon GZfos12E2]
          Length = 252

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 97/260 (37%), Gaps = 24/260 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I + I     +G +SG+FG+GGG V +P+L+ A         + +  A G +L ++ 
Sbjct: 9   ITLIVIYICIGLFAGFMSGMFGIGGGAVRIPLLNLAG--------LPLLSAFGINLFIVP 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S++  +   +   I+ +I            ++ + +   +    L   F    +L+  
Sbjct: 61  FSSLVGAVS--QRANIDKEIALYLAVGGVFGALIGAFLAGLIPTLILAIIFFALSILIAF 118

Query: 140 LMLKRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            +     +     R    +   +    +  F++   G   G      +   G  I+KA A
Sbjct: 119 GIFIDRIVPALAHRINFTHRDVFASSFLLSFIAAIRGGSAGSLFPAFLKAIGCDIHKAIA 178

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS  V+      A  +             WS G +     +  L  S++   L + +S  
Sbjct: 179 TSLCVTIFTCIGAAAIF------------WSRGDIIWWPAIFALIGSMIGAKLGSAVSLK 226

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
               +L IG  M++   + +
Sbjct: 227 TKSIWLEIGLGMLVVALALI 246


>gi|254451969|ref|ZP_05065406.1| membrane protein [Octadecabacter antarcticus 238]
 gi|198266375|gb|EDY90645.1| membrane protein [Octadecabacter antarcticus 238]
          Length = 319

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 91/276 (32%), Gaps = 54/276 (19%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           +FGVGGG +M P+L       GI  +    VA+ T    I  +S    + H R  T+++K
Sbjct: 44  MFGVGGGFLMTPLLFFI----GIPPA----VAVATGAVQIVASSFSGVLAHLRRKTVDLK 95

Query: 99  ILKDWIFVLPITTVVTSLMISHVD------------KSFLNKAFAIFCLLMGILMLKRDR 146
           +    +    I   V  ++ +++                          +     ++R +
Sbjct: 96  MGTVLLVGGLIGAAVGIVLFNYLKFLGQVDLLVNLCYVVFLGIIGGLMFIESWRAIRRSK 155

Query: 147 LYCERKFPDNYVK----------------------YIWGMVTGFLSGALGVGGGIFTNLL 184
           +   R     +                         I G+  G L+  +GVGGG      
Sbjct: 156 VPGSRPPRRKHGLVHALPLKMKFRVSGLYISVIPPLIIGLTVGILAAIMGVGGGFVMLPA 215

Query: 185 MLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           M++  G        TS      +     ++   + +            V+I   +++   
Sbjct: 216 MIYLLGMPTKVVIGTSLFQIIFVTAFTTMLHATTNFT-----------VDIVLAVLLSIG 264

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            ++   + T++   +  + L I  +M++       A
Sbjct: 265 GVIGAQVGTRIGVKMKAENLRILLAMMVLAVCGKLA 300


>gi|284041003|ref|YP_003390933.1| hypothetical protein Slin_6175 [Spirosoma linguale DSM 74]
 gi|283820296|gb|ADB42134.1| protein of unknown function DUF81 [Spirosoma linguale DSM 74]
          Length = 277

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 7/123 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + LI +   L G L+GL G GGG +++P L    +L        M +A+GTSL +IA  +
Sbjct: 159 LPLIALDGVLVGILTGLVGAGGGFLIIPALVLMVRL-------PMKMAVGTSLLIIAANT 211

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++ F     +  IN   L  +  +  I  +  S +   +    L K F  F L+MGI ++
Sbjct: 212 LIGFWGSTANLNINWPFLIKFTTLSVIGIMAGSFLTRFIPSQSLKKGFGYFVLVMGIYII 271

Query: 143 KRD 145
            R+
Sbjct: 272 ARE 274



 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 88/250 (35%), Gaps = 38/250 (15%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VPVL     +  +       ++   SL V+  TS++  + + R   IN +    +   
Sbjct: 39  LTVPVLVYLLGVNPL-------LSTTYSLFVVGTTSLVGSVNYMRQHQINYRAALIFSVP 91

Query: 107 LPITTVVT-SLMISHVDKSFLN-------------KAFAIFCLLMGILMLKRDRLYCERK 152
             +   ++ S ++ ++     +               FA+  L+  + M++         
Sbjct: 92  SFLGVYLSRSYLLPNIPDPVFSIQTFVLSKSVAIMILFALTMLMASMSMIRNKMPKVHHP 151

Query: 153 ----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIA 207
                 +  +  + G++ G L+G +G GGG      ++      +  A  TS     +IA
Sbjct: 152 GGTLHGNLPLIALDGVLVGILTGLVGAGGGFLIIPALVLMVRLPMKMAVGTSL---LIIA 208

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
              L+    S   LN         +N   ++    +S++     + L+  I  + L  GF
Sbjct: 209 ANTLIGFWGSTANLN---------INWPFLIKFTTLSVIGIMAGSFLTRFIPSQSLKKGF 259

Query: 268 SMIMFTTSFV 277
              +      
Sbjct: 260 GYFVLVMGIY 269


>gi|226954049|ref|ZP_03824513.1| protein of hypothetical function DUF81 [Acinetobacter sp. ATCC
           27244]
 gi|294650347|ref|ZP_06727714.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|226835206|gb|EEH67589.1| protein of hypothetical function DUF81 [Acinetobacter sp. ATCC
           27244]
 gi|292823760|gb|EFF82596.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 295

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 53/278 (19%), Positives = 96/278 (34%), Gaps = 44/278 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  L G   G+ GVGGG +M P+L   F+       I  H+A+GT L   + +    
Sbjct: 7   FILAGVLVGFCVGITGVGGGSLMTPILISLFK-------IEPHIAIGTDLLYASISKFCG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
            + H +   I   I+          +  T+ ++ H           L     +   L GI
Sbjct: 60  SLVHAKKLNIVWPIVIWLALGSIPASFATTWVLEHHLSQSTHYKSVLTMVLGVMLTLTGI 119

Query: 140 LMLKRD---------RLYCERKFPD--------NYVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++ R          R   +                  I G+V G L     VG G F  
Sbjct: 120 SIIFRAQIEKFFDRFRNREQADMESEQHALQHKRRYILIMGVVLGVLVTLSSVGAGAFGI 179

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
           + ++       + +   +    + L+              + GL   S G V+   ++ +
Sbjct: 180 MALVLMFPNLPMIRIIGSDVVHAVLLT------------AVAGLGHMSSGNVDFSLLMWL 227

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L  SI    + T +S  + ++++     + +F     F
Sbjct: 228 LVGSIPAIVVGTLISSRLPERFIRKILGITLFALGLNF 265



 Score = 43.1 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 47/121 (38%), Gaps = 6/121 (4%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            I++   + G L  L  VG G   +  L   F       ++ M   +G+ +      + +
Sbjct: 155 YILIMGVVLGVLVTLSSVGAGAFGIMALVLMF------PNLPMIRIIGSDVVHAVLLTAV 208

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + + H   G ++  +L   +       VV +L+ S + + F+ K   I    +G+  +  
Sbjct: 209 AGLGHMSSGNVDFSLLMWLLVGSIPAIVVGTLISSRLPERFIRKILGITLFALGLNFIVN 268

Query: 145 D 145
            
Sbjct: 269 P 269


>gi|293608182|ref|ZP_06690485.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828755|gb|EFF87117.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 295

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 95/278 (34%), Gaps = 44/278 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  L G   G+ GVGGG +M P+L   F+       I  H+A+GT L   A +    
Sbjct: 7   FILAGMLVGFCVGITGVGGGSLMTPILISLFR-------IEPHIAIGTDLLYAAISKFCG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
            M H R   I   I+          + +TS ++ H           L         L G+
Sbjct: 60  SMVHARKLNIVWPIVLWLAVGSIPASFITSWVLEHYLSQSTHYKAVLTMVLGFMLTLTGV 119

Query: 140 LMLKRDRL--------------YCERKF---PDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++ R R+                  +           I G++ G       VG G F  
Sbjct: 120 SIIFRTRIEKFFNKFRTKEVTQSENEQLAIDKKRSFIVIMGIILGVFVTLSSVGAGAFGI 179

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
           + ++       + +   +    + L+              + GL   S G V+   ++ +
Sbjct: 180 MALVIMFPNLPMIRIIGSDVVHAVLLTL------------VAGLGHMSAGNVDFTLLMWL 227

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L  SI    + T +S  + ++ +     + +F     F
Sbjct: 228 LVGSIPAIIIGTLISSRMPERLIRKILGLTLFALGVNF 265



 Score = 38.9 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 49/130 (37%), Gaps = 7/130 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            I++   + G    L  VG G   +  L   F       ++ M   +G+ +      +++
Sbjct: 155 FIVIMGIILGVFVTLSSVGAGAFGIMALVIMF------PNLPMIRIIGSDVVHAVLLTLV 208

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-MLK 143
           + + H   G ++  +L   +       ++ +L+ S + +  + K   +    +G+  M+ 
Sbjct: 209 AGLGHMSAGNVDFTLLMWLLVGSIPAIIIGTLISSRMPERLIRKILGLTLFALGVNFMVH 268

Query: 144 RDRLYCERKF 153
             +   +   
Sbjct: 269 PVKAKPKAPV 278


>gi|28897780|ref|NP_797385.1| hypothetical protein VP1006 [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363795|ref|ZP_05776550.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030]
 gi|28805993|dbj|BAC59269.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308113886|gb|EFO51426.1| conserved inner membrane protein [Vibrio parahaemolyticus K5030]
          Length = 261

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 94/267 (35%), Gaps = 29/267 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+      
Sbjct: 7   TMLLVLALVAFVAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + +      +          +   + +L +  +   +L K   +  L   + 
Sbjct: 58  ASSTAAFTYYKKRLFKPQCWGRAFAATLVGATLGTLFVDAISTDWLEKVLPLIILAAALY 117

Query: 141 MLKRDRLYCERKFPDN-------YVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASI 192
            +    L+   + P           +Y+ G+  GF  G  G G G F T   M  Y  +I
Sbjct: 118 TVFHKTLHSPHQSPIPEPCPKLHKKQYLQGLSIGFYDGLAGPGTGAFWTVSSMALYRLNI 177

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A+  +  ++    F +L+                LG +N    L +    +    +  
Sbjct: 178 LLASGLAKAMNFTSNFTSLITFAI------------LGHINWVLGLTMGVCLMAGAFVGA 225

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             +   G K++   F  ++   +   A
Sbjct: 226 HSAIRFGSKFIRPVFVTVVSVLAIKLA 252


>gi|89891731|ref|ZP_01203234.1| conserved hypothetical transmembrane protein [Flavobacteria
           bacterium BBFL7]
 gi|89516066|gb|EAS18730.1| conserved hypothetical transmembrane protein [Flavobacteria
           bacterium BBFL7]
          Length = 266

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 8/132 (6%)

Query: 15  SKDCVVDY-ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
            ++ V+ Y   LIIV   + GT++G+ G GGG +++P L            + M  A+ T
Sbjct: 139 DEESVITYNYLLIIVEGLVVGTITGIVGAGGGFLIIPALVLL-------AKLPMKKAVAT 191

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           SL +IA  S++ F+   ++  I+   L  +  +  I   +   +   +D   L KAF  F
Sbjct: 192 SLFIIAIKSLIGFLGDVKNLEIDWTFLLPFTALSIIGIFLGIWLNKFIDGKKLKKAFGWF 251

Query: 134 CLLMGILMLKRD 145
            L+MGI ++ ++
Sbjct: 252 VLVMGIYIIYKE 263



 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 93/249 (37%), Gaps = 37/249 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP+L  A  L  +       +A   SL V+  TS++  +++   G ++ K    +   
Sbjct: 29  LTVPILVYALTLNPV-------LATAYSLFVVGTTSLVGAIKNMMKGMVDFKTAIIFAIP 81

Query: 107 LPITTVVT-SLMISHVDKSFLNK-------------AFAIFCLLMGILMLKRDRLYCERK 152
             I   +T + +I  +                     FAI  LL  I M++ +R   + +
Sbjct: 82  AFIAVYLTRAYLIPAIPDELFTIGTIVVTKNLAIMLFFAIIMLLASISMIRNNRKEGDEE 141

Query: 153 FPDNY---VKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAF 208
               Y   +  + G+V G ++G +G GGG      ++      + KA ATS     +IA 
Sbjct: 142 SVITYNYLLIIVEGLVVGTITGIVGAGGGFLIIPALVLLAKLPMKKAVATSL---FIIAI 198

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            +L+  +     L          ++   +L    +SI+   L   L+  I  K L   F 
Sbjct: 199 KSLIGFLGDVKNLE---------IDWTFLLPFTALSIIGIFLGIWLNKFIDGKKLKKAFG 249

Query: 269 MIMFTTSFV 277
             +      
Sbjct: 250 WFVLVMGIY 258


>gi|66045690|ref|YP_235531.1| hypothetical protein Psyr_2454 [Pseudomonas syringae pv. syringae
           B728a]
 gi|63256397|gb|AAY37493.1| Protein of unknown function DUF81 [Pseudomonas syringae pv.
           syringae B728a]
          Length = 280

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 96/264 (36%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 30  LTTLAILAVVAFIAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 80

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     +    +   + +++  ++   +LN+   +     G+
Sbjct: 81  FGSATASFTFYRRKLFDPRQWLHAVVGTAVGAALGAVIAHYLPAEWLNQMLPVIVFGCGL 140

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G+  GF  G  G G G F T   +L Y   + KA
Sbjct: 141 YLLFGGTPKAPLDSNAPIRKKWQLPQGLGLGFYDGVAGPGTGAFWTVSTLLLYPVDLVKA 200

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V I+SG        + +G       L +    +L        +
Sbjct: 201 SGVARSMNFVSNAVALSVFIFSGQ-----VDYIIG-------LSMGLAVMLGAYFGAGTA 248

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 249 IKGGAKFIRPVFITVVLGLTVRLA 272


>gi|300778873|ref|ZP_07088731.1| membrane protein [Chryseobacterium gleum ATCC 35910]
 gi|300504383|gb|EFK35523.1| membrane protein [Chryseobacterium gleum ATCC 35910]
          Length = 260

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 7/116 (6%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             + G L+GL G GGG +++P L    +       I M +A+GTSL +I+  S++ F   
Sbjct: 149 GSIVGVLTGLVGAGGGFMIIPALVNLLK-------IPMKIAIGTSLVIISLNSLIGFFSS 201

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
             H  I+ K+L     +     V+ S +   +D   L  AF  F L+MGI ++ ++
Sbjct: 202 VNHMKIDWKLLISITVIAIAGIVIGSQLSKKIDGKKLKPAFGWFILIMGIYIITKE 257



 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 90/244 (36%), Gaps = 34/244 (13%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL   F +          +A   SL ++  +S++  + + + G IN KI   +     
Sbjct: 28  VPVLVYLFGIDAF-------MATEYSLFIVGISSLVGSVSYFKKGLINFKIAMVFGVPSI 80

Query: 109 ITTVVT-SLMISHVDKS-------------FLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
           I+  +T + ++  +                FL   FA   +L    M++++    +    
Sbjct: 81  ISIFLTRTYLLPLIPDEIFRIQNFTMTRNIFLLLIFAGLMILASYKMIRKNTSEHKTDKN 140

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLV 213
           + +     G + G L+G +G GGG      L+      +  A  TS     +I+  +L+ 
Sbjct: 141 NVFQAAGQGSIVGVLTGLVGAGGGFMIIPALVNLLKIPMKIAIGTSL---VIISLNSLIG 197

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
              S   +          ++   ++ I  I+I    + ++LS  I  K L   F   +  
Sbjct: 198 FFSSVNHMK---------IDWKLLISITVIAIAGIVIGSQLSKKIDGKKLKPAFGWFILI 248

Query: 274 TSFV 277
               
Sbjct: 249 MGIY 252


>gi|228998421|ref|ZP_04158012.1| hypothetical protein bmyco0003_29830 [Bacillus mycoides Rock3-17]
 gi|229005908|ref|ZP_04163602.1| hypothetical protein bmyco0002_28320 [Bacillus mycoides Rock1-4]
 gi|228755372|gb|EEM04723.1| hypothetical protein bmyco0002_28320 [Bacillus mycoides Rock1-4]
 gi|228761342|gb|EEM10297.1| hypothetical protein bmyco0003_29830 [Bacillus mycoides Rock3-17]
          Length = 251

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 85/212 (40%), Gaps = 24/212 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           + +H+A+ TSL  +A T++   + H R   + MKI         + + V S + + +   
Sbjct: 35  VPIHIALATSLTAMAFTTLSGVISHYRERNVVMKIGCVVGGFGALGSYVGSKIGAGIPAQ 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK-----------YIWGMVTGFLSGAL 173
            L+   A    L  I ML R      +K     +             + G+ TG L+GA 
Sbjct: 95  LLHWFTAGMLFLSAICMLVRLFFVQNQKELSASLSDQLSPYVLGKGAMLGIATGILAGAF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G SI+++  T+  V   IA    +               S G++
Sbjct: 155 GIGSAPFIQLGLMVLLGLSIHQSVGTTMLVILPIAIGGGVGYT------------SAGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           +   ++ +L  ++L   +  K +    +  L 
Sbjct: 203 DYMLLVQVLMGTMLGAYIGAKFTNYAPRIILR 234


>gi|218898767|ref|YP_002447178.1| permease [Bacillus cereus G9842]
 gi|218545096|gb|ACK97490.1| permease [Bacillus cereus G9842]
          Length = 251

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         I + + S     +   
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGLLIPAH 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +  ++ +++    Y                G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIMFQKKEQSSLYKHKEFSVKYLLKCVCLGLVTGMMAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 203 DYILLLQVLIGTMLGAYIGAKFTNYAPRTLLR--FSMIM 239



 Score = 40.4 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K+  V Y+   +    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 130 KEFSVKYLLKCVCLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 182

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  ++ L 
Sbjct: 183 LVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRTLLR 234


>gi|228959862|ref|ZP_04121535.1| hypothetical protein bthur0005_33360 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229047356|ref|ZP_04192954.1| hypothetical protein bcere0027_33430 [Bacillus cereus AH676]
 gi|228723981|gb|EEL75328.1| hypothetical protein bcere0027_33430 [Bacillus cereus AH676]
 gi|228799800|gb|EEM46744.1| hypothetical protein bthur0005_33360 [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 251

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         I + + S   S +   
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +  ++  ++    Y                G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKKFSMNYLLKCICLGLVTGMMAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 203 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR--FSMIM 239



 Score = 40.4 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K   ++Y+   I    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 130 KKFSMNYLLKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 182

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 183 LVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR 234


>gi|71906776|ref|YP_284363.1| hypothetical protein Daro_1137 [Dechloromonas aromatica RCB]
 gi|71846397|gb|AAZ45893.1| Protein of unknown function DUF81 [Dechloromonas aromatica RCB]
          Length = 250

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 83/214 (38%), Gaps = 17/214 (7%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
             +A GT+L ++ P   +S   + +   +        +      T +T+   S +  S L
Sbjct: 44  QKLAQGTALVMMVPNLSISLWRYTQRQPLPKLRTALLVLSAVTATTLTAHYASGLASSEL 103

Query: 127 NKAFAIFCLLMGI---LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
            + F  F L + I     L+  R       P+  +  + G+V G   G + +GGG+ T  
Sbjct: 104 RRYFGAFLLWLAIHSLWSLRAGRSRWSFSLPERLIP-LVGLVGGTCQGLISIGGGMITPP 162

Query: 184 LM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           ++  F+  +   A   +  +    +  ALL          GL  W +G       ++   
Sbjct: 163 ILVTFFRQTQAMAQGFAIALVMPSSIVALLTF-----SKVGLVDWKMG-------VLFAL 210

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              L       +++ + ++ L + F++++  T+ 
Sbjct: 211 GGALTVSYGVGIAHRLPERRLRVAFALMLLATAL 244



 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 54/119 (45%), Gaps = 7/119 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI +   + GT  GL  +GGG++  P+L   F+           +A G ++ ++ P+S++
Sbjct: 137 LIPLVGLVGGTCQGLISIGGGMITPPILVTFFR-------QTQAMAQGFAIALVMPSSIV 189

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + +   + G ++ K+   +     +T      +   + +  L  AFA+  L   + M+ 
Sbjct: 190 ALLTFSKVGLVDWKMGVLFALGGALTVSYGVGIAHRLPERRLRVAFALMLLATALWMIF 248


>gi|330445429|ref|ZP_08309081.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489620|dbj|GAA03578.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 257

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 94/266 (35%), Gaps = 28/266 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++   +  +G +  + G GGG++ VP L            +  H+A+GT+    + 
Sbjct: 8   STLLILGAVALAAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAASF 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + +    + +          I  +  +L+++ +    L KA  +    + I 
Sbjct: 59  ASATAAWAYYKKNLFSPRFWIASFIATLIGAITGTLIVNLISSDGLEKALPLVIFAVAIY 118

Query: 141 MLKRDRLYCERKFPD------NYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIY 193
            +   +   E +            +++ G   GF  G  G G G F T   M+ Y   + 
Sbjct: 119 TIWHPQPKDEHQTLPAVTPKFKAKQWLQGTSIGFYDGIAGPGTGAFWTVSSMILYRLDML 178

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +A   +  ++      +LL  I           ++LG       L +    +L   +   
Sbjct: 179 RACGLAKAMNFTSNITSLLTFIIL-----DQVNFALG-------LTMGVCLMLGAYIGAH 226

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +   G K++   F  ++   +   A
Sbjct: 227 SAIRFGAKFIRPVFVTVVLILAIKLA 252


>gi|258626826|ref|ZP_05721633.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258580873|gb|EEW05815.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 258

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 95/264 (35%), Gaps = 28/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+       S
Sbjct: 9   FMVLALVAFIAGFIDAVAG-GGGMLTVPALLSL--------GLPPHLALGTNKLAATFAS 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R    +    K       I  ++ +L +S +   +L K   +  L   +  +
Sbjct: 60  STAAWTYYREKLFDPACWKRAFIATLIGAILGTLAVSAISTEWLRKVLPLVILAAALYTV 119

Query: 143 KRDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
               +  ++    +        + + G+  GF  G  G G G F T   M+ Y  +I  A
Sbjct: 120 FHRPIQTQQTATPSPCPKLNRKQILQGLGLGFYDGLAGPGTGAFWTVSSMVLYRFNILFA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++      +L+                LG ++    L +    +    +    +
Sbjct: 180 SGLAKAMNLTSNLTSLVTFAI------------LGHIDWLLGLTMGICLMAGAFVGAHSA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G  ++   F +++   +   A
Sbjct: 228 IRFGAPFIRPLFILVVTLLAGKLA 251


>gi|19554001|ref|NP_602003.1| permease [Corynebacterium glutamicum ATCC 13032]
 gi|62391648|ref|YP_227050.1| permease [Corynebacterium glutamicum ATCC 13032]
 gi|21325585|dbj|BAC00206.1| Predicted permeases [Corynebacterium glutamicum ATCC 13032]
 gi|41326990|emb|CAF20834.1| Predicted permease [Corynebacterium glutamicum ATCC 13032]
          Length = 309

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 88/250 (35%), Gaps = 21/250 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +  I +A   +  + G  G+G G+    +L     L     S  +H A         
Sbjct: 1   MQTLIFIAIAGVAAQLVDGGLGMGFGVTSTTILIMLAGLGPAQASAVVHTAE-------V 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+++S + H + G ++ K++        I     +  +S++         ++   L+G+
Sbjct: 54  GTTLVSGLSHWKFGNVDWKVVVRLGIPGAIGAFAGATFLSNISTEAAAPITSLILALIGM 113

Query: 140 LML-----KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS-IY 193
            ++      R R     +          G+V GF+  + G G G  T   +L  G +   
Sbjct: 114 NLVWRFSKGRIRRDYSDRPHSRGFLGGLGIVGGFVDASGGGGWGPVTTSTLLSLGRTEPR 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           K   T      L++  A L  +   W             N+ AVL +L    +  P+   
Sbjct: 174 KVVGTVNTAEFLVSLAATLGFVVGLWDDLVA--------NLSAVLALLIGGAIAAPIGAW 225

Query: 254 LSYMIGKKYL 263
           +   +    L
Sbjct: 226 MISRVNATVL 235


>gi|110632388|ref|YP_672596.1| hypothetical protein Meso_0026 [Mesorhizobium sp. BNC1]
 gi|110283372|gb|ABG61431.1| protein of unknown function DUF81 [Chelativorans sp. BNC1]
          Length = 305

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 101/294 (34%), Gaps = 56/294 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G LSG+FGVGGG ++ P+L           ++   +A+ T    +  +S
Sbjct: 14  MLVLLAMGGAVGFLSGMFGVGGGFLITPLLIFY--------NVPPAIAVATGANQVIASS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL-----NKAFAIFCLLM 137
               + H + GT+++K+    +    I +     + +++ +  L     +  + +    +
Sbjct: 66  FSGTLSHLKRGTLDVKLGLVLLVGGIIGSAAGIYVFAYLRQLGLLDLTVSLLYVVLLGSV 125

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R    + F         G + 
Sbjct: 126 GGLMLVESVRAIQRSRAGQAASLRRPGQHNWIHRLPLKMRFRASKLFVSVIPILALGAMI 185

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           GFL+  +GVGGG      M++           TS      +A    +   Y+        
Sbjct: 186 GFLASLMGVGGGFIMVPAMIYLLKVPTNVVVGTSLFQIIFVAAFTTVSHAYTNQT----- 240

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                 V++    +++   +      T++   +  + L    ++++   +   A
Sbjct: 241 ------VDVVLAFLLMVGGVAGAQYGTRVGQKLRGEQLRALLALLVLAVAIRLA 288



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 56/141 (39%), Gaps = 9/141 (6%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M F +    V  I ++ + + + G L+ L GVGGG +MVP +    +       +  +V 
Sbjct: 164 MRFRASKLFVSVIPILALGAMI-GFLASLMGVGGGFIMVPAMIYLLK-------VPTNVV 215

Query: 71  MGTSLGVIAPTSVMSFMEH-RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           +GTSL  I   +  + + H   + T+++ +    +          + +   +    L   
Sbjct: 216 VGTSLFQIIFVAAFTTVSHAYTNQTVDVVLAFLLMVGGVAGAQYGTRVGQKLRGEQLRAL 275

Query: 130 FAIFCLLMGILMLKRDRLYCE 150
            A+  L + I +     +   
Sbjct: 276 LALLVLAVAIRLAFDLFVRPS 296


>gi|163761304|ref|ZP_02168379.1| hypothetical protein HPDFL43_21639 [Hoeflea phototrophica DFL-43]
 gi|162281461|gb|EDQ31757.1| hypothetical protein HPDFL43_21639 [Hoeflea phototrophica DFL-43]
          Length = 308

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 104/305 (34%), Gaps = 56/305 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + +I+      G LSG+FGVGGG ++ P+L           +I   V
Sbjct: 1   MTIYLPIAELSVNVFVILGMGAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPAV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    +  +S+   + H R G++++K+    +        V   + + + +      
Sbjct: 53  AVATGANQVVASSISGALAHFRRGSLDIKLGLVLLIGGLGGATVGIQIFTLLRQLGQLDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            ++  + +F   +G LML                                + R    + +
Sbjct: 113 IISLLYVVFLGSVGGLMLWESVNSMRRAANNNPVPLRKPGQHNWVHRLPFKMRFKRSKIY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G   G L+  +GVGGG      M++           TS      +     +
Sbjct: 173 LSIIPVIALGFAIGILTSVMGVGGGFIMVPAMIYLLRIPTNVVIGTSLFQIIFVTAFTTV 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           V+  + +            V+I    +++   ++      ++   +  + L  G ++++ 
Sbjct: 233 VQATTNYT-----------VDIVLAWLLMIAGVIGAQYGVRVGQKMRGEQLRAGLALLVL 281

Query: 273 TTSFV 277
                
Sbjct: 282 AVGIR 286


>gi|330809647|ref|YP_004354109.1| membrane protein [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327377755|gb|AEA69105.1| Conserved hypothetical protein, putative membrane protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 259

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 95/264 (35%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L  A         +  H+ +GT+     
Sbjct: 9   LTTLAILAVVAFIAGFIDAIAG-GGGLLTTPALLTA--------GLPPHLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     +    + +     +    +  +  +++  ++   +LNK   +     G+
Sbjct: 60  FGSATASFTFYKRKLFHPRQWTHALVGTLVGALTGAIVAHYLPAEWLNKMLPVIVFACGL 119

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G   GF  G  G G G F T   +L Y   + KA
Sbjct: 120 YLLFGGTPKAPLDSNAPIKKTWQSPQGFSLGFYDGVAGPGTGAFWTVSSLLLYPIDLVKA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V I+SG             V+    L +    ++      + +
Sbjct: 180 SGVARSMNFVSNIAALSVFIFSGQ------------VDWVIGLSMGVSVMIGAFFGARTA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 ISGGAKFIRPVFITVVLGLTVRLA 251


>gi|212640254|ref|YP_002316774.1| putative permease [Anoxybacillus flavithermus WK1]
 gi|212561734|gb|ACJ34789.1| Predicted permease [Anoxybacillus flavithermus WK1]
          Length = 274

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 101/274 (36%), Gaps = 33/274 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L++V  FL+GT+  L G+GGG+++VP L        +  +I   +A+GTSL VI    +
Sbjct: 6   ILLLVIGFLAGTIGSLVGLGGGVIIVPALLFLSTA-HVLPAISPQMAVGTSLVVIIFNGL 64

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +H  ++ K    +        ++ + +  HV     +  F +F + +  L++ 
Sbjct: 65  SSTLTYMKHKMVDYKSGLFFFIGSGPGAMLGAWVNQHVHMQHFSLYFGLFLIAVSFLLMF 124

Query: 144 RDRLYCERK-----------FPDNYVKYIWGMVTGFLSG---------ALGVGGGIFTNL 183
           + RL   +K                V Y +  +                   GG +    
Sbjct: 125 QSRLSPSKKRTFPMMSTYVTNEGEEVTYGYHPLIATFIAFVVGFVGGFFGIGGGSLMVPA 184

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +ML +    + A ATS  +  L +  +    ++            +G V       ++P 
Sbjct: 185 MMLLFLFPPHVAVATSMFIVFLSSIVSSSTHVW------------MGNVAWTFAFALIPG 232

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             +       L+  +  K +     M++      
Sbjct: 233 VWIGAKCGVWLNRRLKGKTVVTLLRMVLILLGVR 266



 Score = 43.5 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 37/96 (38%), Gaps = 7/96 (7%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP +   F           HVA+ TS+ ++  +S++S   H   G +        I  
Sbjct: 180 LMVPAMMLLFLF-------PPHVAVATSMFIVFLSSIVSSSTHVWMGNVAWTFAFALIPG 232

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + I       +   +    +     +  +L+G+ ++
Sbjct: 233 VWIGAKCGVWLNRRLKGKTVVTLLRMVLILLGVRLI 268


>gi|86138958|ref|ZP_01057529.1| membrane protein [Roseobacter sp. MED193]
 gi|85824189|gb|EAQ44393.1| membrane protein [Roseobacter sp. MED193]
          Length = 306

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 96/277 (34%), Gaps = 55/277 (19%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG +M P+L       GI       VA+ T    I  +S    + H R  T++
Sbjct: 28  SGMFGVGGGFLMTPLLFFI----GIPPV----VAVATEANQIVASSFSGVLAHFRRRTVD 79

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGILML--------- 142
           +K+         I   +  ++ +++         +   + +F  ++G LM          
Sbjct: 80  IKMGVVLQVGGLIGAGLGVVVFNYLKSLGQVDLLVTLCYVVFLGIVGTLMFIESLNAIFK 139

Query: 143 ---------------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
                                 + R      +       + G+  G L+  +GVGGG   
Sbjct: 140 SKRAGSGPAPRRQRGWVHALPFKMRFRTSGLYISVIPPIMVGVAVGILAAIMGVGGGFIM 199

Query: 182 NLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
              M++  G        TS     L+     ++   + +            V+I   +++
Sbjct: 200 VPAMIYILGMPTKVVVGTSLFQIILVTAFTTMLHATTNYT-----------VDIVLAVLL 248

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L   ++   + T++   +  + L I  ++++      
Sbjct: 249 LVGGVIGAQIGTRIGVYLKAEQLRILLALMVMLVCAK 285



 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 47/116 (40%), Gaps = 8/116 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+     G L+ + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 178 IMVGVAVGILAAIMGVGGGFIMVPAMIYIL-------GMPTKVVVGTSLFQIILVTAFTT 230

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           M H     T+++ +    +    I   + + +  ++    L    A+  +L+   +
Sbjct: 231 MLHATTNYTVDIVLAVLLLVGGVIGAQIGTRIGVYLKAEQLRILLALMVMLVCAKL 286


>gi|238759041|ref|ZP_04620211.1| Inner membrane protein yfcA [Yersinia aldovae ATCC 35236]
 gi|238702718|gb|EEP95265.1| Inner membrane protein yfcA [Yersinia aldovae ATCC 35236]
          Length = 268

 Score = 72.8 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 98/234 (41%), Gaps = 25/234 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ + + L+G +  + G GGGL+ VP L       G+  +      + T+       S  
Sbjct: 13  ILFLVAILAGFIDSIAG-GGGLLTVPALLAI----GLPPAQV----LATNKLQSVGGSFS 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +   R G +N+K  K  I +  + +++ ++++ H+    L +   +  + +G+  L  
Sbjct: 64  ASLYFIRRGAVNLKEQKLTIALTVVGSMLGAILVQHMRADILRQILPLLVIGIGVYFLVT 123

Query: 145 DRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSA 200
            +L     +R+        I G   GF  G  G G G F  L  +   G ++ K+TA + 
Sbjct: 124 PKLGEADQQRRLSALPFALIAGGGVGFYDGFFGPGAGSFYALAFVTLCGFNLAKSTAHAK 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            ++      +L+  I  G  +     WS+G       L++L   +L   L   +
Sbjct: 184 VLNFTSNAGSLIFFIVGGKVV-----WSIG-------LVMLVGQVLGARLGAHM 225


>gi|94496328|ref|ZP_01302905.1| hypothetical protein SKA58_09056 [Sphingomonas sp. SKA58]
 gi|94424074|gb|EAT09098.1| hypothetical protein SKA58_09056 [Sphingomonas sp. SKA58]
          Length = 257

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 95/254 (37%), Gaps = 19/254 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I+  F +  + G  G+  G++     S     MG+  S     A  +       T+
Sbjct: 12  ILPFILIGFGAQMIDGALGMAYGVIS----STLLLAMGVPPSR----ASASVHAAETFTT 63

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +S + H  HG ++ ++    I    +  V  + ++S++D S +     I+   +G+ ++
Sbjct: 64  GVSAISHILHGNVDWRLFARLIIPGVVGGVAGAYLLSNIDGSVIKPFVQIYLAAIGLYLI 123

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            R   +   K  D       G+  GF+    G G G      +L  G+S      T   V
Sbjct: 124 WRG-FHLPPKPRDPKWVTPLGLAGGFMDATGGGGWGPIVTSNLLLQGSSPRHTIGTVNSV 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
             ++     L  ++   G      +++G         +L   ++  P    L+  I  ++
Sbjct: 183 EFILTLSISLTFLFH-LGWETFTTYTVG---------LLIGGVVAAPFGAMLARRIAPRF 232

Query: 263 LTIGFSMIMFTTSF 276
           L     +I+  TS 
Sbjct: 233 LFSAVGVILTITSA 246


>gi|229071178|ref|ZP_04204403.1| hypothetical protein bcere0025_33520 [Bacillus cereus F65185]
 gi|228711919|gb|EEL63869.1| hypothetical protein bcere0025_33520 [Bacillus cereus F65185]
          Length = 251

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G +   I         I + + S   S +   
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVVSHYREGNVAFIIGGIVGGFGAIGSYIGSKFGSLIPAH 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +  ++  ++    Y                G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKEFSMNYFLKCICLGLVTGMMAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+    +I ++  T+  V   IA    L               S G++
Sbjct: 155 GIGSAPFIQLGLMVLLRLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 203 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR--FSMIM 239



 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K+  ++Y    I    ++G ++G FG+G    +   L    +L        +  ++GT++
Sbjct: 130 KEFSMNYFLKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLLRL-------TIQQSVGTTM 182

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 183 LVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR 234


>gi|104781314|ref|YP_607812.1| hypothetical protein PSEEN2185 [Pseudomonas entomophila L48]
 gi|95110301|emb|CAK15008.1| conserved hypothetical protein; putative membrane protein
           [Pseudomonas entomophila L48]
          Length = 259

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 98/261 (37%), Gaps = 25/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++ + +F++G +  + G GGGL+  P L  A    G+      H+ +GT+       +
Sbjct: 12  LLILALVAFVAGFIDAIAG-GGGLLTTPALLTA----GMPP----HLVLGTNKLSSTFGA 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + + + R    +    +  I    +  ++ ++   ++   +LNK   +     G+ +L
Sbjct: 63  ATASITYYRRKLFHPAQWRLAILGTLVGALIGAVAAHYMPAEWLNKMLPVIVFACGVYLL 122

Query: 143 KRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATAT 198
                              ++  G   GF  G  G G G F T   +L Y   + +A+  
Sbjct: 123 FGGTPKAPLDADAPIKRKWQFPQGFSLGFYDGVAGPGTGAFWTVSTLLLYPIDLVRASGV 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++ +    AL V I SG        + +G       L +    ++      + +   
Sbjct: 183 ARSMNFVSNIAALTVFIISGQ-----VDYIVG-------LCMGLSVMVGAFFGARTAISG 230

Query: 259 GKKYLTIGFSMIMFTTSFVFA 279
           G K++   F  ++   +   A
Sbjct: 231 GSKFIRPVFITVVLALTVRLA 251


>gi|196038130|ref|ZP_03105440.1| putative membrane protein [Bacillus cereus NVH0597-99]
 gi|196031400|gb|EDX69997.1| putative membrane protein [Bacillus cereus NVH0597-99]
          Length = 300

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 90/263 (34%), Gaps = 23/263 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A         
Sbjct: 1   MQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE-------V 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H + G ++   +        I   V +  +S++    +    ++F   +G+
Sbjct: 53  VTTAASGASHLKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISLFLFTLGV 112

Query: 140 LMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            +L R     ++    K          G+  GF+    G G G  T  ++L  G    K 
Sbjct: 113 YILLRFIIQKQIVTSNKRISAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLARGNEARKV 172

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             +       +A  A +    S GW            V+   V  ++   I+  P+A  L
Sbjct: 173 IGSVDTSEFPVALAATIGFFISLGWEQ----------VSWVWVFALMLGGIVAAPIAAWL 222

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             ++    L +    ++  T+  
Sbjct: 223 VRIVPSHLLGVLVGGLIIFTNIR 245


>gi|322419874|ref|YP_004199097.1| hypothetical protein GM18_2363 [Geobacter sp. M18]
 gi|320126261|gb|ADW13821.1| protein of unknown function DUF81 [Geobacter sp. M18]
          Length = 253

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 101/262 (38%), Gaps = 26/262 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              ++ +   ++G +  + G GGGL+ +PVL            +    A+GT+       
Sbjct: 8   LFPILFLTGGVAGLIDAIAG-GGGLITIPVLLGI--------GLPPQTALGTNKLQATFG 58

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  +     + GT+N++  +  +    +  V+ S  +  +D  FL K      L +    
Sbjct: 59  SCSAMTHFVKAGTVNLRDARPGVLWTAVGAVLGSYTVQQMDPGFLKKCIPFLLLAILCYT 118

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           +   +L  +    + P      + G+  GF  G LG G G F  + +ML  G  + K T 
Sbjct: 119 IFTPKLGAQEVHPRLPRRTFYLLAGLGLGFYDGFLGPGTGSFWVIAIMLGLGFDMRKGTG 178

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +   + +    +L V +              G V + A L++     +   +  +L   
Sbjct: 179 YTKLFNFVSNIVSLAVFVAG------------GHVLLWAGLLMGAGQAVGARVGARLVIH 226

Query: 258 IGKKYLTIGFSM-IMFTTSFVF 278
            G +++   F   ++  T+ +F
Sbjct: 227 KGTRFVRPVFICSVLAVTAKLF 248


>gi|251788967|ref|YP_003003688.1| hypothetical protein Dd1591_1347 [Dickeya zeae Ech1591]
 gi|247537588|gb|ACT06209.1| protein of unknown function DUF81 [Dickeya zeae Ech1591]
          Length = 266

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 25/238 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D + L+ +AS ++G +  + G GGGL+ +PVL       G+  +      + T+      
Sbjct: 9   DILALLFLASVIAGFVDSIAG-GGGLLSIPVLL----AAGLSPAQV----LATNKLQAVG 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R   ++MKIL+  + +  +  V  + +I  +   F+ K   +  + +G+ 
Sbjct: 60  GSFSASLYFIRRKAVDMKILRLTVPLTFLGAVFGAWLIQQIHADFMRKLLPVLVIGIGLY 119

Query: 141 MLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L   ++  +    +        + G   GF  G  G G G F  L  +   G ++ KAT
Sbjct: 120 FLLMPKVGGDDRQARLSLLPFSLLGGACVGFYDGFFGPGAGSFYALAYVTLLGFNLAKAT 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A +  ++    F +LL  +  G             V  G  L++L   I+   L  K+
Sbjct: 180 AHAKVLNFTSNFGSLLFFMLGGQ------------VVWGIGLVMLVGQIIGARLGAKM 225


>gi|239827198|ref|YP_002949822.1| hypothetical protein GWCH70_1814 [Geobacillus sp. WCH70]
 gi|239807491|gb|ACS24556.1| protein of unknown function DUF81 [Geobacillus sp. WCH70]
          Length = 294

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 96/263 (36%), Gaps = 26/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++  F++  + G  G+  G+     L  AF +     S  +H+A          T+
Sbjct: 4   LIVFVIVGFIAQLIDGSLGMAYGVTST-TLLLAFGIAPAVASASVHLAE-------VVTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H + G ++  ++   I    +     +  +S++    +    ++F L +G  ++
Sbjct: 56  AASGASHIKFGNVDRDMVIKLIIPGSLGAFFGACFLSNLPGDVIKPYISLFLLALGFYIM 115

Query: 143 KR---DRLYCERKFPDNYV---KYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKA 195
            R        +++ P  +        G+V GFL    G G G  +  ++L   G    K 
Sbjct: 116 YRFLFLSPRQDQQPPRKFSNKQLVPLGLVAGFLDATGGGGWGPISTPVLLANKGMEARKV 175

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             T       +A  A +  + S GW            VN   V  ++   I+  P+A  L
Sbjct: 176 VGTVDTSEFAVALSATIGFVISLGWEQ----------VNWFWVGTLMLGGIVAAPIAAWL 225

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +    L +    I+  T+  
Sbjct: 226 VRKMPSHLLGVLVGGIIIFTNIR 248


>gi|158320809|ref|YP_001513316.1| permease [Alkaliphilus oremlandii OhILAs]
 gi|158141008|gb|ABW19320.1| permease [Alkaliphilus oremlandii OhILAs]
          Length = 120

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 7/124 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V +   II+  F SG ++GLFG GGG + V  L+  F       S+  H A  T++ +I 
Sbjct: 4   VSHFTFIILIGFTSGIVNGLFGAGGGTIAVLALTLIF-------SVSQHKAQATAISIIL 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           P S++S   + R G   M+          I + + S +++ + +++L K F  F ++  +
Sbjct: 57  PLSLISGFIYYRSGFTTMETTVKVAIGGVIGSYIGSNLLNKIPENYLRKIFGAFIIVSAL 116

Query: 140 LMLK 143
            M+ 
Sbjct: 117 RMVF 120



 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 46/120 (38%), Gaps = 13/120 (10%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
            + G  +G ++G  G GGG    L +   +  S +KA AT+  +   ++  +  +     
Sbjct: 11  ILIGFTSGIVNGLFGAGGGTIAVLALTLIFSVSQHKAQATAISIILPLSLISGFIY---- 66

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                   +  GF  +   + +    ++ + + + L   I + YL   F   +  ++   
Sbjct: 67  --------YRSGFTTMETTVKVAIGGVIGSYIGSNLLNKIPENYLRKIFGAFIIVSALRM 118


>gi|297618339|ref|YP_003703498.1| hypothetical protein Slip_2191 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297146176|gb|ADI02933.1| protein of unknown function DUF81 [Syntrophothermus lipocalidus DSM
           12680]
          Length = 264

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 101/271 (37%), Gaps = 35/271 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  +   L+G + GL G GG  +++PV+   F            +A+GT+L  +  T+ 
Sbjct: 4   LVFFIVGILAGVIGGLLGTGGCALIMPVIRFGF-------DFAPALAVGTTLTAVVFTAS 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD--KSFLNKAFAIFCLLMGILM 141
              ++H + G ++ +      +   +  ++ S++  ++    S ++    I  +++ + M
Sbjct: 57  SGAIQHIKMGNVDKETAMLTGYSGILGVIIGSIVFGYIKPYGSLIDLIIGIAFIVVTLRM 116

Query: 142 LKRD------------RLYCERKFPDNYV-KYIWGMVTGFLSGALGVGGG-IFTNLLMLF 187
           L                    +  P   + K I G   GFL+G +G+GGG       +  
Sbjct: 117 LYEGITGLIAAAQPQPAPASGQGLPGTPLSKSILGSAIGFLTGIIGLGGGYALVPSFLYL 176

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           + A +  A  TS      +A    + ++Y               VNI   + +   +++ 
Sbjct: 177 FKAPMRFAIGTSMASFVWMALVGAIFKLYQHV------------VNIPVAITLGLGAVIG 224

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                KL        L   F ++    S  +
Sbjct: 225 AIYGAKLVARFKPAALKTLFGLLFLYVSLKY 255



 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 34/96 (35%), Gaps = 7/96 (7%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP     F+         M  A+GTS+      +++  +       +N+ +        
Sbjct: 169 LVPSFLYLFKA-------PMRFAIGTSMASFVWMALVGAIFKLYQHVVNIPVAITLGLGA 221

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            I  +  + +++    + L   F +  L + +  + 
Sbjct: 222 VIGAIYGAKLVARFKPAALKTLFGLLFLYVSLKYIL 257


>gi|89097979|ref|ZP_01170866.1| hypothetical Membrane Spanning Protein [Bacillus sp. NRRL B-14911]
 gi|89087481|gb|EAR66595.1| hypothetical Membrane Spanning Protein [Bacillus sp. NRRL B-14911]
          Length = 259

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 79/212 (37%), Gaps = 23/212 (10%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + +H+A+GTSL  +  TS+     H R G + +K                S + + +  
Sbjct: 42  DVPIHIALGTSLTAMIFTSLSGAYSHYREGNMAVKAGLVTGIAGAFGAYGGSQLAAGIPV 101

Query: 124 SFLNKAFAIFCLLMGILMLKR----------DRLYCERKFPDNYVKYIWGMVTGFLSGAL 173
             L+   A    L  IL++ R          +    +          I G++TG LSG  
Sbjct: 102 ESLHWLTAGMLFLSSILLMVRLYITKNLTDHEAGRDKLSVQLAVKAVILGLITGVLSGTF 161

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L L++  G +I ++  T+  V   IA    L               S G++
Sbjct: 162 GIGSTPFIQLGLLIMLGLTIRQSIGTTMLVILPIAAGGGLGY------------QSEGYL 209

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           +   +L +L  ++    +  K +    K  L 
Sbjct: 210 DYLLLLQVLLGTMTGAYIGAKFTGYAPKNVLK 241


>gi|260903448|ref|ZP_05911843.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037]
 gi|308110353|gb|EFO47893.1| conserved inner membrane protein [Vibrio parahaemolyticus AQ4037]
          Length = 249

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 90/261 (34%), Gaps = 29/261 (11%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            + +F++G +  + G GGG++ VP L            +  H+A+GT+       S  + 
Sbjct: 1   ALVAFVAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATFASSTAA 51

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             + +      +          +   + +L +  +   +L K   +  L   +  +    
Sbjct: 52  FTYYKKRLFKPQCWGRAFAATLVGATLGTLFVDAISTDWLEKVLPLIILAAALYTVFHKT 111

Query: 147 LYCERKFPDN-------YVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATAT 198
            +   + P           +Y+ G+  GF  G  G G G F T   M  Y  +I  A+  
Sbjct: 112 PHSPHQSPIPEPCPKLHKKQYLQGLSIGFYDGLAGPGTGAFWTVSSMALYRLNILLASGL 171

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++    F +L+                LG +N    L +    +    +    +   
Sbjct: 172 AKAMNFTSNFTSLITFAI------------LGHINWVLGLTMGVCLMAGAFVGAHSAIRF 219

Query: 259 GKKYLTIGFSMIMFTTSFVFA 279
           G K++   F  ++   +   A
Sbjct: 220 GSKFIRPVFVTVVSVLAIKLA 240


>gi|152988106|ref|YP_001348832.1| hypothetical protein PSPA7_3473 [Pseudomonas aeruginosa PA7]
 gi|150963264|gb|ABR85289.1| membrane protein, putative [Pseudomonas aeruginosa PA7]
          Length = 259

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 95/263 (36%), Gaps = 25/263 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++   +FL+G +  + G GGGL+ +P L  A    G+      H+A+GT+      
Sbjct: 10  STLIILAAVAFLAGFIDAIAG-GGGLLTIPALLTA----GVPP----HLALGTNKLSSTF 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     R    +    ++ +    I   V +     +   +LN+       + G+ 
Sbjct: 61  GAATASYTFYRRKLFHPGKWRNGLLATAIGAAVGAWAAHLLPAEWLNRMLPAVVFVCGLY 120

Query: 141 MLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
           ML                   ++  G+  GF  G  G G G F T   +L Y   + +A+
Sbjct: 121 MLFGGTPKAPLDADAPVGRKRQWPQGLALGFYDGVAGPGTGAFWTVSSLLMYPLDLVRAS 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++ +    AL V I SG             V     L +    ++      + + 
Sbjct: 181 GVARSMNFVSNVVALAVFIASGQ------------VVWLLGLCMGGSLMIGAYFGARTAI 228

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G +++   F +++   +   A
Sbjct: 229 GGGARFIRPVFILVVLALTARLA 251


>gi|229542917|ref|ZP_04431977.1| protein of unknown function DUF81 [Bacillus coagulans 36D1]
 gi|229327337|gb|EEN93012.1| protein of unknown function DUF81 [Bacillus coagulans 36D1]
          Length = 318

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 92/259 (35%), Gaps = 24/259 (9%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           + +  +  + ++ +    +  + G  G+G G+      +      GI  +    VA  + 
Sbjct: 18  AGNMNMQKLIVLALVGLAAQLVDGSLGMGYGVTS----TSLLLAFGIAPA----VASASV 69

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
                 T+  S + H + G ++  I+   +    +   + + ++SH+  S L    +IF 
Sbjct: 70  HLAEVFTTAASGVSHMKFGNVDKGIIWKLVVPGAVGAFLGATVLSHLPASTLKPYISIFL 129

Query: 135 LLMGILMLK------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           + +G+ +L       R  L  ++K   N      G V GF     G G G      +L  
Sbjct: 130 IALGLYILIRFLINARGALKVKKKTGSNVFFIPLGFVAGFFDATGGGGWGPIATPALLSR 189

Query: 189 G-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                 K   +       ++  + +  + S   +          +N    + ++   ++ 
Sbjct: 190 NDIEPRKVIGSVDTSEFAVSLASSIGFLLSLGAMQ---------INWIWTIALMLGGLIA 240

Query: 248 TPLATKLSYMIGKKYLTIG 266
            P+A  L  ++    L + 
Sbjct: 241 APIAAYLVKILPAHLLAVI 259


>gi|145296795|ref|YP_001139616.1| hypothetical protein cgR_2698 [Corynebacterium glutamicum R]
 gi|140846715|dbj|BAF55714.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 309

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 88/250 (35%), Gaps = 21/250 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +  I +A   +  + G  G+G G+    +L     L     S  +H A         
Sbjct: 1   MQTLIFIAIAGVAAQLVDGGLGMGFGVTSTTILIMLAGLGPAQASAVVHTAE-------V 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+++S + H + G ++ K++        I     +  +S++         ++   L+G+
Sbjct: 54  GTTLVSGLSHWKFGNVDWKVVVRLGIPGAIGAFAGATFLSNISTEAAAPITSLILALIGM 113

Query: 140 LML-----KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS-IY 193
            ++      R R     +          G+V GF+  + G G G  T   +L  G +   
Sbjct: 114 NLVWRFSKGRIRRDYSDRPHSRGFLGGLGIVGGFVDASGGGGWGPVTTSTLLSLGRTEPR 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           K   T      L++  A L  +   W             N+ AVL +L    +  P+   
Sbjct: 174 KVVGTVNTAEFLVSLAATLGFVVGLWEDLVA--------NLSAVLALLIGGAIAAPIGAW 225

Query: 254 LSYMIGKKYL 263
           +   +    L
Sbjct: 226 MISRVNATVL 235


>gi|237808215|ref|YP_002892655.1| hypothetical protein Tola_1454 [Tolumonas auensis DSM 9187]
 gi|237500476|gb|ACQ93069.1| protein of unknown function DUF81 [Tolumonas auensis DSM 9187]
          Length = 253

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 99/262 (37%), Gaps = 25/262 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +    +G +  + G GGGL+ VP L            I    A+ T+    +
Sbjct: 5   LSTLILLAICGVAAGFIDSIAG-GGGLLTVPALLSV--------GISPAQALATNKLQSS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R G I++K++++ IF   I + + +L++  +D S L +A     +   +
Sbjct: 56  FGSFSATFYFLRRGYIDLKLIRNGIFFTFIGSALGTLLVQQIDPSALKQAIPFMLIGFAL 115

Query: 140 LMLKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
             +   R+  E +      +    + G+  GF  G  G G G  F    +   G ++ KA
Sbjct: 116 YFIFSPRIGEEDRQQRINFSLFSLLVGLGVGFYDGFFGPGTGSFFAIAFVALAGFNLSKA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           TA S  ++      +L+  +  G             +     +I+     +   L +K+ 
Sbjct: 176 TAYSKLLNFTSNIASLIFFMLGGK------------ILWQVGIIMGVGQFIGARLGSKMV 223

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
              G K +      +    S  
Sbjct: 224 VSKGSKIIRPLLVTMSLIMSAR 245


>gi|52424923|ref|YP_088060.1| hypothetical protein MS0868 [Mannheimia succiniciproducens MBEL55E]
 gi|52306975|gb|AAU37475.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 264

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 53/267 (19%), Positives = 108/267 (40%), Gaps = 25/267 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  ++   ++   + ++G +  + G GGGL+ +P L     + G+  +    +A+GT+  
Sbjct: 12  EVTIEITVILFTVAVIAGFIDSIAG-GGGLITIPALL----MTGMPPA----LALGTNKL 62

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                S  +     R   +++  +   + +  I  V+ +++I  VD S + K      L 
Sbjct: 63  QACGGSFSASWYFIRRRAVDLSAVWLILLMTFIGAVIGTILIQLVDASLIKKVIPFLVLA 122

Query: 137 MGILMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
           +G+  L   +L      ++       +  G+  GF  G  G G G I +   +   G ++
Sbjct: 123 IGLYFLFTPKLGEQDARQRLSYGVYAFTAGVSIGFYDGFFGPGTGSILSLACVTLLGFNL 182

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            KATA +   +    F +L+  +  G  L     WS+G       L++L    +      
Sbjct: 183 AKATAHAKVFNFTSNFASLIFFLIGGHIL-----WSVG-------LVMLVGQFIGAHFGA 230

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           K+    GKK +     ++ F  +   A
Sbjct: 231 KMVLSGGKKIIRPMVVIMSFIMTVKMA 257


>gi|308094438|ref|ZP_05889299.2| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
 gi|308093853|gb|EFO43548.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
          Length = 259

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 94/267 (35%), Gaps = 29/267 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+      
Sbjct: 5   TMLLVLALVAFVAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATF 55

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + +      +          +   + +L +  +   +L K   +  L   + 
Sbjct: 56  ASSTAAFTYYKKRLFKPQCWGRAFAATLVGATLGTLFVDAISTDWLEKVLPLIILAAALY 115

Query: 141 MLKRDRLYCERKFPDN-------YVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASI 192
            +    L+   + P           +Y+ G+  GF  G  G G G F T   M  Y  +I
Sbjct: 116 TVFHKTLHSPHQSPIPEPCPKLHKKQYLQGLSIGFYDGLAGPGTGAFWTVSSMALYRLNI 175

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A+  +  ++    F +L+                LG +N    L +    +    +  
Sbjct: 176 LLASGLAKAMNFTSNFTSLITFAI------------LGHINWVLGLTMGVCLMAGAFVGA 223

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             +   G K++   F  ++   +   A
Sbjct: 224 HSAIRFGSKFIRPVFVTVVSVLAIKLA 250


>gi|229018872|ref|ZP_04175718.1| hypothetical protein bcere0030_33880 [Bacillus cereus AH1273]
 gi|229025113|ref|ZP_04181540.1| hypothetical protein bcere0029_34170 [Bacillus cereus AH1272]
 gi|228736223|gb|EEL86791.1| hypothetical protein bcere0029_34170 [Bacillus cereus AH1272]
 gi|228742426|gb|EEL92580.1| hypothetical protein bcere0030_33880 [Bacillus cereus AH1273]
          Length = 256

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G +   I         I + + S   S +  +
Sbjct: 40  IPIHVALATSLTAMAFTTLSGVVSHYREGNVVFVIGGIVGGFGAIGSFIGSKFGSLIPAN 99

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV-----------KYIWGMVTGFLSGAL 173
            L+   A    L  I M  R  ++ +++                     G+VTG L+G+ 
Sbjct: 100 LLHWFTAGMLFLSAIFMFIRLIIFQKKERSSLKGHNELSKDNLIKCICLGLVTGMLAGSF 159

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L L++  G +I ++  T+  V   IA    L               S G++
Sbjct: 160 GIGSAPFIQLGLIVLLGLTIQQSIGTTMLVILPIAIGGGLGYS------------SEGYL 207

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   ++ +L  ++L   +  K +    +  L   FSMIM
Sbjct: 208 DYVLLVQVLIGTMLGAYIGAKFTNYAPRMLLR--FSMIM 244



 Score = 38.5 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 43/107 (40%), Gaps = 7/107 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D +   I    ++G L+G FG+G    +   L            + +  ++GT++ VI P
Sbjct: 140 DNLIKCICLGLVTGMLAGSFGIGSAPFIQLGLIVLL-------GLTIQQSIGTTMLVILP 192

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            ++   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 193 IAIGGGLGYSSEGYLDYVLLVQVLIGTMLGAYIGAKFTNYAPRMLLR 239


>gi|30021165|ref|NP_832796.1| hypothetical protein BC3050 [Bacillus cereus ATCC 14579]
 gi|296503591|ref|YP_003665291.1| hypothetical protein BMB171_C2760 [Bacillus thuringiensis BMB171]
 gi|29896718|gb|AAP09997.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579]
 gi|296324643|gb|ADH07571.1| hypothetical protein BMB171_C2760 [Bacillus thuringiensis BMB171]
          Length = 300

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 90/263 (34%), Gaps = 23/263 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A         
Sbjct: 1   MQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE-------V 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H + G ++   +        I   V +  +S++    +    ++F   +G+
Sbjct: 53  VTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISVFLFTLGV 112

Query: 140 LMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            +L R     ++    K          G+  GF+    G G G  T  ++L  G    K 
Sbjct: 113 YILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLARGNEARKV 172

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             +       ++  A +    S GW            V+   V  ++   I+  P+A  L
Sbjct: 173 IGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFSLMLGGIVAAPIAAWL 222

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             ++    L +    ++  T+  
Sbjct: 223 VRIVPSHLLGVLVGGLIIFTNIR 245


>gi|209527086|ref|ZP_03275601.1| protein of unknown function DUF81 [Arthrospira maxima CS-328]
 gi|209492514|gb|EDZ92854.1| protein of unknown function DUF81 [Arthrospira maxima CS-328]
          Length = 270

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 97/256 (37%), Gaps = 36/256 (14%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
             G+GGG V+VP+L               + A+ TS+  +  T++   +++ R G + +K
Sbjct: 29  FLGIGGGTVLVPILVTL--------GYVSNQAVATSIFSVLITAISGSIQNWRMGFLRVK 80

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM---------------LK 143
            +    F   IT ++ S +   +  S+L   F    LL   L+               L 
Sbjct: 81  RVISIGFSAVITAILGSYIADLLPSSWLLFGFGCLLLLNIYLVKVRQDIIAKKQLDEQLN 140

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL-MLFYGASIYKATATSAGV 202
                 E+         I G + G L+G  GVGGG+    L +L  G +I  +  TS GV
Sbjct: 141 PGSTQPEKTINPYLAFMITGSLAGLLAGLFGVGGGVIIVPLQILLLGETIKVSIQTSLGV 200

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
             + A  A +                 G V  G   ++    ++   ++T+    +  + 
Sbjct: 201 IIITAASACIGHAIQ------------GNVLWGQGFMLGLGGLVGVQISTRFLPKLPDRI 248

Query: 263 LTIGFSMIMFTTSFVF 278
           +T+ F  ++   S   
Sbjct: 249 VTLAFRTLLGILSIYM 264



 Score = 68.6 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +  ++     ++   L+G L+GLFGVGGG+++VP+               + V++ TSL
Sbjct: 146 PEKTINPYLAFMITGSLAGLLAGLFGVGGGVIIVPLQILLL-------GETIKVSIQTSL 198

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
           GVI  T+  + + H   G +             +   +++  +  +    +  AF     
Sbjct: 199 GVIIITAASACIGHAIQGNVLWGQGFMLGLGGLVGVQISTRFLPKLPDRIVTLAFRTLLG 258

Query: 136 LMGILMLKR 144
           ++ I M  R
Sbjct: 259 ILSIYMFWR 267


>gi|75674383|ref|YP_316804.1| hypothetical protein Nwi_0184 [Nitrobacter winogradskyi Nb-255]
 gi|74419253|gb|ABA03452.1| Protein of unknown function DUF81 [Nitrobacter winogradskyi Nb-255]
          Length = 343

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 101/309 (32%), Gaps = 60/309 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + LI+      G +SG+FG+GGG +M P+L            I   V
Sbjct: 36  VQLYLPIADIPVNVLLILAMGAAVGFVSGMFGIGGGFLMTPLLIFV--------GIAPAV 87

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS---------- 119
           A+ T    IA +S    + + R   ++  +    +    I T++  L  +          
Sbjct: 88  AVATVTSHIAASSFSGALSYWRKRAVDPMLALVLLSGGVIGTILGVLTFTRLRSLGQLDL 147

Query: 120 --HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV------------------- 158
              +    L           G+  + R R         +                     
Sbjct: 148 LIALSYLVLLSGVGAAMSWEGLRAMLRARQNRTVPLRRSGGHGWVHGLPLKIRFKRSKIY 207

Query: 159 -----KYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G++ GF+   +G+GGG     L+++           TS  ++ +    A +
Sbjct: 208 LSAIPVIAIGLLIGFIGAVMGIGGGFILVPLLIYLLRVPTSTVIGTSMMLTLITMTFATV 267

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS--ILITPLATKLSYMIGKKYLTIGFSMI 270
           +   +   ++             AVL ++ ++  +       +    I  ++L +   M+
Sbjct: 268 LHAATNHLVD-------------AVLALILMTGGVTGAQFGARAGQRIRGEHLRLLLGML 314

Query: 271 MFTTSFVFA 279
           +      FA
Sbjct: 315 ILAVGIRFA 323


>gi|239637839|ref|ZP_04678801.1| conserved membrane protein YtnM [Staphylococcus warneri L37603]
 gi|239596597|gb|EEQ79132.1| conserved membrane protein YtnM [Staphylococcus warneri L37603]
          Length = 299

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 89/259 (34%), Gaps = 24/259 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +A FL+  + G  G+G G       S      G+  +I       T       T+
Sbjct: 4   LLVFALAGFLAQLVDGSLGMGFGA----SSSSILLTFGVAPAIV----SATVHFSEIATT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H +   ++   +        I+  + + +++ ++ + +    A+F L MG+ +L
Sbjct: 56  AASGTSHWKFENVHYPTMLKLAIPGAISAFLGAAVLTRINANAIKPLIALFLLSMGVYIL 115

Query: 143 KR---DRLYCERKFPDNYV---KYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKA 195
            +        E  +   +      + G + GFL    G G G     L+L          
Sbjct: 116 YQFIFKHTNEEHHYSGQFGRIRMVLQGAIAGFLDAIGGGGWGPVNTPLLLSSKKMEPRYV 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T +     +   A L  I             +  +N  AV+ +    ++  P++  L 
Sbjct: 176 IGTVSASEFFVTLSASLSFIVF---------LGMTHINWLAVIALSVGGLIAAPISAYLV 226

Query: 256 YMIGKKYLTIGFSMIMFTT 274
            ++    L I    ++  T
Sbjct: 227 KILPINILAICVGGLIIFT 245


>gi|332982251|ref|YP_004463692.1| hypothetical protein Mahau_1689 [Mahella australiensis 50-1 BON]
 gi|332699929|gb|AEE96870.1| protein of unknown function DUF81 [Mahella australiensis 50-1 BON]
          Length = 125

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 7/118 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I    F++G  +GLFG GGG+++VP +S           I  H A  T+L +I P +++S
Sbjct: 15  ITAIGFVTGLFNGLFGSGGGMIVVPAMSMIL-------GIEEHDAHATALSIILPLTIVS 67

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + + G ++ ++             + + ++  V    L K FA+F ++  + M+ 
Sbjct: 68  IFIYAKSGIVDWQLTWKVALGGVSGGYIGARLLHVVPADTLRKIFAVFMIIAAVRMIF 125



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 13/120 (10%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
              G VTG  +G  G GGG+     M    G   + A AT+  +   +   ++ +   SG
Sbjct: 16  TAIGFVTGLFNGLFGSGGGMIVVPAMSMILGIEEHDAHATALSIILPLTIVSIFIYAKSG 75

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                        V+      +    +    +  +L +++    L   F++ M   +   
Sbjct: 76  I------------VDWQLTWKVALGGVSGGYIGARLLHVVPADTLRKIFAVFMIIAAVRM 123


>gi|293399969|ref|ZP_06644115.1| putative transporter [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306369|gb|EFE47612.1| putative transporter [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 256

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 95/261 (36%), Gaps = 25/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             +  +A   +G  +G  G+    V+ P+L            +  + A+G +L      S
Sbjct: 5   FIVCFIAGIGAGLGTGFAGMSAAAVISPMLITFL-------GMPAYEAVGIALSSDVLAS 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +S   + ++  +++K     +  + I T+V S + S V  + +         L+GI  +
Sbjct: 58  AISAYTYGKNKNLDIKNGLVMMVTVLIFTMVGSWISSLVPNTAMGGFSVFMTFLLGIKFI 117

Query: 143 KRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKA 195
            R  +  +                + G++ GF+ G +G GGG+   L++    G  +  A
Sbjct: 118 VRPVMTTKESMGDIDPKKRFVQSVLCGILIGFICGFIGAGGGMMMLLILTSVLGYELKTA 177

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TS  +    AF   +     G           G  +  A+L  +  ++L   +A K +
Sbjct: 178 VGTSVFIMTFTAFTGAVSHFTIG-----------GAPDWWAMLFCILSTLLWARVAAKFA 226

Query: 256 YMIGKKYLTIGFSMIMFTTSF 276
                  L     +++     
Sbjct: 227 NKAKPITLNRATGVVLTVLGI 247


>gi|254420823|ref|ZP_05034547.1| conserved domain protein, putative [Brevundimonas sp. BAL3]
 gi|196187000|gb|EDX81976.1| conserved domain protein, putative [Brevundimonas sp. BAL3]
          Length = 264

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 59/261 (22%), Positives = 98/261 (37%), Gaps = 25/261 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L   A  L G   GL G GG ++ VP++     +         H+A+GTS   +A  +  
Sbjct: 10  LGAGAGSLVGFTLGLVGGGGSILAVPLIVYLVGVKDP------HLAIGTSAFAVAANAFA 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + + H RHGT+  KI   +         + S +   VD   L   FA   L++G+LML+ 
Sbjct: 64  NLLNHARHGTVKWKIAGLFALAGVFGAFLGSSLGKAVDGQKLLALFAALMLVVGVLMLRG 123

Query: 145 DRLYCERKFP----DNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATS 199
                +        +       G +TG +SG  G+GGG      LM+     IY A  +S
Sbjct: 124 RSASGDPDVVLTPGNAPKLVGAGALTGIMSGFFGIGGGFLIVPGLMVSTRMPIYYAVGSS 183

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                             GW            V+     + +   +L   +  +L+  + 
Sbjct: 184 LVGVTAFGLTTAFNYALDGW------------VDWPLAAVFIGGGVLGGLVGARLAKALS 231

Query: 260 KKY--LTIGFSMIMFTTSFVF 278
            +   L   F+ ++F  +F  
Sbjct: 232 GQKGLLNTVFAGLIFVVAFYM 252



 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 9/122 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++ A  L+G +SG FG+GGG ++VP L        +   + ++ A+G+SL  +    + +
Sbjct: 142 LVGAGALTGIMSGFFGIGGGFLIVPGLM-------VSTRMPIYYAVGSSLVGVTAFGLTT 194

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS--FLNKAFAIFCLLMGILMLK 143
              +   G ++  +   +I    +  +V + +   +      LN  FA    ++   ML 
Sbjct: 195 AFNYALDGWVDWPLAAVFIGGGVLGGLVGARLAKALSGQKGLLNTVFAGLIFVVAFYMLY 254

Query: 144 RD 145
           R 
Sbjct: 255 RS 256


>gi|312126788|ref|YP_003991662.1| hypothetical protein Calhy_0552 [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776807|gb|ADQ06293.1| protein of unknown function DUF81 [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 276

 Score = 72.4 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 57/289 (19%), Positives = 107/289 (37%), Gaps = 51/289 (17%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  + V S ++G +  L G+GGGL+++P LS  F+         MH A    L  +  T
Sbjct: 1   MIAEVFVVSIIAGFIGSLLGIGGGLIVIPFLSIVFKFN-------MHQAAAAGLVSVIAT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  +   + +    +++I         I  V+ +++   +    L+  F I  L    LM
Sbjct: 54  SSGAASAYVKDRLTHLRIGMFLQLATVIGGVLGAILSGFLPAKVLSLIFGILLLYNSFLM 113

Query: 142 LKRDRLYCERKFPDNYVK-------------------------------YIWGMVTGFLS 170
           +K  +   + +     +                                ++   + G LS
Sbjct: 114 IKNRKSDEKPQPSSLQISKWAKKLKLYGSYFDKIQNREIEYSAQNITGGFLMMTLAGILS 173

Query: 171 GALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G LG+G GIF  L +          +TATS  +  + A  ++ + +  G  +        
Sbjct: 174 GLLGIGSGIFKVLALDTIMKLPFKVSTATSNFMMGVTALASISIYLARGDIVYD------ 227

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 A   +    ++ + +  +L   I  KYL + F++I+  TS   
Sbjct: 228 ------ACGAVAVGVLVGSAIGARLMPYIKSKYLRVAFALILIYTSIEM 270



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+G LSGL G+G G+  V  L    +L          V+  TS  ++  T++ S   +  
Sbjct: 168 LAGILSGLLGIGSGIFKVLALDTIMKL-------PFKVSTATSNFMMGVTALASISIYLA 220

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G I           + + + + + ++ ++   +L  AFA+  +   I M+++
Sbjct: 221 RGDIVYDACGAVAVGVLVGSAIGARLMPYIKSKYLRVAFALILIYTSIEMIRK 273


>gi|146307159|ref|YP_001187624.1| hypothetical protein Pmen_2132 [Pseudomonas mendocina ymp]
 gi|145575360|gb|ABP84892.1| protein of unknown function DUF81 [Pseudomonas mendocina ymp]
          Length = 254

 Score = 72.0 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 75/229 (32%), Gaps = 24/229 (10%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + +PVL   F L          +A GT+L ++ P  +++   + +   I+++        
Sbjct: 30  IAIPVLGVLFGLD-------QQLAQGTALVMVVPNVMLAIWRYHQRNRIDLRHALLLGVT 82

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIF----CLLMGILMLKRDRLYCERKFPDNYVKYIW 162
                 + SL    VD   +  AF  F         + ML                  + 
Sbjct: 83  SFFCAWLASLYAVEVDSRTMRWAFVGFLLALAAYNLLRMLMAQVPASGELRHHWGWFGVL 142

Query: 163 GMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
           G V+G + G  GVGG +    ++   +G +   A   S  ++       LL         
Sbjct: 143 GGVSGAMGGLFGVGGAVVATPVLTSVFGTTQVVAQGLSLSLALPSTGVTLLTYALHH--- 199

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
                     VN    + +    +L      +L++ + ++ L   F   
Sbjct: 200 ---------HVNWWMGVPLAIGGLLSISWGVRLAHSLPERLLRSLFCGF 239



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
              V   +SG + GLFGVGG +V  PVL+  F    +       VA G SL +  P++ +
Sbjct: 138 WFGVLGGVSGAMGGLFGVGGAVVATPVLTSVFGTTQV-------VAQGLSLSLALPSTGV 190

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           + + +  H  +N  +         ++      +   + +  L   F  F
Sbjct: 191 TLLTYALHHHVNWWMGVPLAIGGLLSISWGVRLAHSLPERLLRSLFCGF 239


>gi|57168482|ref|ZP_00367616.1| conserved hypothetical integral membrane protein [Campylobacter
           coli RM2228]
 gi|305432901|ref|ZP_07402059.1| conserved hypothetical integral membrane protein [Campylobacter
           coli JV20]
 gi|57020290|gb|EAL56964.1| conserved hypothetical integral membrane protein [Campylobacter
           coli RM2228]
 gi|304444055|gb|EFM36710.1| conserved hypothetical integral membrane protein [Campylobacter
           coli JV20]
          Length = 261

 Score = 72.0 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 74/198 (37%), Gaps = 13/198 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I     SG  SGLFG+GGG+++VP +               H A+G S+  +   ++  
Sbjct: 8   YIFIGIFSGITSGLFGIGGGMIIVPSMFAL--------GASAHHAIGISVLQMIFAAIFG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              + +   +N+K          +    + +++  +    L   F     +  I      
Sbjct: 60  SYINYKKKNLNLKDGIVIGLGGLLGASFSGILLQALSDVALTAIFLGVSCVFFIKYAFGI 119

Query: 146 RLYCERKFPD----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSA 200
           +    +        N + +I G  TG  + +LG+GGG+    ++ ++ G    K  + S 
Sbjct: 120 KESVVKSHKSVWVKNGILFIAGAFTGIFAISLGIGGGLLIAPILAYFLGYDSKKVVSLSL 179

Query: 201 GVSALIAFPALLVRIYSG 218
                 +   ++    SG
Sbjct: 180 FFVIFASISGIISFANSG 197


>gi|218236098|ref|YP_002368485.1| permease [Bacillus cereus B4264]
 gi|218164055|gb|ACK64047.1| permease [Bacillus cereus B4264]
          Length = 251

 Score = 72.0 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         I + + S   S +   
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVVSHYREGNVALIIGGIVGGFGAIGSYIGSKFGSLIPAH 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +  ++  ++    Y                G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIMFQNKEQSSLYKHKKFSMNYLLKCIYLGLVTGMMAGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA    L               S G++
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 203 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR--FSMIM 239



 Score = 40.1 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K   ++Y+   I    ++G ++G FG+G    +   L            + +  ++GT++
Sbjct: 130 KKFSMNYLLKCIYLGLVTGMMAGSFGIGSAPFIQLGLMVLL-------GLTIQQSVGTTM 182

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 183 LVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR 234


>gi|222096544|ref|YP_002530601.1| hypothetical protein BCQ_2884 [Bacillus cereus Q1]
 gi|221240602|gb|ACM13312.1| membrane protein, putative [Bacillus cereus Q1]
          Length = 300

 Score = 72.0 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 91/263 (34%), Gaps = 23/263 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A         
Sbjct: 1   MQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE-------V 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H + G ++   +        I   + +  +S++    +    ++F   +G+
Sbjct: 53  VTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFIGACFLSNLPGDVIKPYISVFLFTLGV 112

Query: 140 LMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            +L R     ++   +K          G+  GF+    G G G  T  ++L  G    K 
Sbjct: 113 YILLRFIIQKQVVTSKKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLARGNEARKV 172

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             +       ++  A +    S GW            V+   V  ++   I+  P+A  L
Sbjct: 173 IGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFSLMLGGIVAAPIAAWL 222

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             ++    L +    ++  T+  
Sbjct: 223 VRIVPSHLLGVLVGGLIIFTNIR 245


>gi|222150801|ref|YP_002559954.1| hypothetical protein MCCL_0551 [Macrococcus caseolyticus JCSC5402]
 gi|222119923|dbj|BAH17258.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 238

 Score = 72.0 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 87/236 (36%), Gaps = 33/236 (13%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
           D I    A+GTS  ++  T + + + + ++   ++K    ++  +    ++ + +  ++ 
Sbjct: 7   DGITPQKAIGTSTVILISTGLTAAIGYMKNKQADLKNAVIFMIGIIPGALIGAHLSKYLT 66

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY--------------------VKYIW 162
               N  F IF ++M I++L RD++   + F +                         I 
Sbjct: 67  LHSFNLYFGIFLIIMSIVLLVRDKIKPIKLFQNKAHEKTFTDKEGVTYHYSIAPIPAVIA 126

Query: 163 GMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
               G L+G  G+GGG     LM + +    + A  TS  +  + +    +  I      
Sbjct: 127 TFFVGCLTGLFGIGGGALMTPLMIIIFRFPPHIAVGTSMIMIFVSSITGAVSHI-----A 181

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                WS  F+       ++  S +   +  +++  +    + +   +I+      
Sbjct: 182 QDNIIWSYAFI-------LIAASYVGARIGVRINKTMKSSTVVMMLRVILMLLGIY 230



 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 7/119 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A+F  G L+GLFG+GGG +M P++   F+          H+A+GTS+ +I  +S+   
Sbjct: 124 VIATFFVGCLTGLFGIGGGALMTPLMIIIFRF-------PPHIAVGTSMIMIFVSSITGA 176

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           + H     I        I    +   +   +   +  S +     +  +L+GI ++ + 
Sbjct: 177 VSHIAQDNIIWSYAFILIAASYVGARIGVRINKTMKSSTVVMMLRVILMLLGIYLIIKS 235


>gi|262165964|ref|ZP_06033701.1| hypothetical protein VMA_002413 [Vibrio mimicus VM223]
 gi|262025680|gb|EEY44348.1| hypothetical protein VMA_002413 [Vibrio mimicus VM223]
          Length = 258

 Score = 72.0 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 95/264 (35%), Gaps = 28/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+       S
Sbjct: 9   FMVLALVAFIAGFIDAVAG-GGGMLTVPALLSL--------GLPPHLALGTNKLAATFAS 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R    +    K       I  ++ +L +S +   +L K   +  L   +  +
Sbjct: 60  STAAWTYYREKLFDPACWKRAFIATLIGAILGTLAVSAISTEWLRKVLPLIILAAALYTV 119

Query: 143 KRDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
               ++ ++    +        + + G+  GF  G  G G G F T   M  Y  +I  A
Sbjct: 120 FHRPIHTQQTATPSPCPKLNRKQILQGLGLGFYDGLAGPGTGAFWTVSSMALYRFNILFA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++      +L+                LG ++    L +    +    +    +
Sbjct: 180 SGLAKAMNLTSNLTSLVTFAI------------LGHIDWLLGLTMGVCLMAGAFVGAHSA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G  ++   F +++   +   A
Sbjct: 228 IRFGAPFIRPLFILVVTLLAGKLA 251


>gi|148558578|ref|YP_001258028.1| hypothetical protein BOV_A1081 [Brucella ovis ATCC 25840]
 gi|148369863|gb|ABQ62735.1| putative membrane protein [Brucella ovis ATCC 25840]
          Length = 286

 Score = 72.0 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 52/285 (18%), Positives = 95/285 (33%), Gaps = 49/285 (17%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + VA+F +  L G+ G+  G+ +VP+L+  F        I +HVA+  SL  +   S 
Sbjct: 10  LWLFVAAFGASMLGGMLGMASGIFIVPLLTSIF-------GIDIHVAIAASLISVIACSC 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S     +    N+++         +       +I  +  ++L   FAI  +L    ML 
Sbjct: 63  GSAAPLLKERLTNIRLAVVLETATTLGAFTGVFLIGVIPTAYLYLMFAIILVLSAWQMLV 122

Query: 144 RDRLYCERKFP--------------------DNYVKYIWGMV---------TGFLSGALG 174
           R R   +   P                      +  Y  G +          G +S  LG
Sbjct: 123 RRREMPQTNRPASRTWATLLRLHSAVPDRSSGKFTSYQVGSLPLGLSLMYGAGLVSALLG 182

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G+     M       I  ++ATS  +  +    +                +  G +N
Sbjct: 183 IGSGVLKIPAMDTALRLPIKVSSATSNFMIGVTGAASAGAY------------FMRGDIN 230

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 +   S+L      ++   I    L I F +++   +   
Sbjct: 231 TAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAIAM 275



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + L +   + +G +S L G+G G++ +P +  A +L        + V+  TS  +I 
Sbjct: 161 VGSLPLGLSLMYGAGLVSALLGIGSGVLKIPAMDTALRL-------PIKVSSATSNFMIG 213

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T   S   +   G IN  I         +  V  + +++ +    L   F I  +L+ I
Sbjct: 214 VTGAASAGAYFMRGDINTAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAI 273

Query: 140 LM 141
            M
Sbjct: 274 AM 275


>gi|228991835|ref|ZP_04151772.1| hypothetical protein bpmyx0001_25810 [Bacillus pseudomycoides DSM
           12442]
 gi|228997953|ref|ZP_04157555.1| hypothetical protein bmyco0003_25230 [Bacillus mycoides Rock3-17]
 gi|229005493|ref|ZP_04163206.1| hypothetical protein bmyco0002_24300 [Bacillus mycoides Rock1-4]
 gi|228755855|gb|EEM05187.1| hypothetical protein bmyco0002_24300 [Bacillus mycoides Rock1-4]
 gi|228761828|gb|EEM10772.1| hypothetical protein bmyco0003_25230 [Bacillus mycoides Rock3-17]
 gi|228767916|gb|EEM16542.1| hypothetical protein bpmyx0001_25810 [Bacillus pseudomycoides DSM
           12442]
          Length = 323

 Score = 72.0 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 95/274 (34%), Gaps = 23/274 (8%)

Query: 9   SLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMH 68
           + +  ++    +  + +  +  F +  + G  G+  G V    L   F +     S  +H
Sbjct: 14  AFLFIITGGFYMQKLIVFAIIGFFAQLIDGALGMAYG-VTSSSLLLMFGIAPAVASASVH 72

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +A          T+  S + H R G ++   +        I   V +  +S++    +  
Sbjct: 73  LAE-------VVTTAASGVSHIRFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDLIKP 125

Query: 129 AFAIFCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
             +IF   +G+ +L R     ++    K          G+  GF+    G G G  T  +
Sbjct: 126 YISIFLFTLGVYILLRFIIQKQIVQSNKRMSGKQLIPLGLFAGFVDSTGGGGWGPITTPV 185

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPI 243
           +L  G    K   +       ++  A +    S GW            V+   V  ++  
Sbjct: 186 LLARGNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWFWVFALMLG 235

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            I+  P+A  L  ++    L +    ++  T+  
Sbjct: 236 GIIAAPIAAWLVRIVPSHLLGVLVGGLIIFTNIR 269


>gi|294635841|ref|ZP_06714296.1| putative membrane protein [Edwardsiella tarda ATCC 23685]
 gi|291090813|gb|EFE23374.1| putative membrane protein [Edwardsiella tarda ATCC 23685]
          Length = 266

 Score = 72.0 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 56/266 (21%), Positives = 104/266 (39%), Gaps = 17/266 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L+ +   L+  LS LFG+GGG+V+VPVL   F       +  + +   TSL V+ 
Sbjct: 3   LGIIALLCLCGALTSLLSALFGLGGGIVLVPVLHVLF------PACEVQLLAATSLSVVM 56

Query: 80  PTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            T++++ +   R     + ++L  W   +     +   +   +    +   FA   LLM 
Sbjct: 57  LTALINVLAFWRQQLRPDPRLLIGWALAVSAGMQLGVHISFLLPGRAILLIFAAILLLMA 116

Query: 139 ILMLKRDRLYCERKF-PDNYVKYIWGMVT--GFLSGALGVGGGIFTNLLMLFYGASIYKA 195
              L+           P     Y  G+    G ++G  G+GGG     L+    +   + 
Sbjct: 117 WRNLRCAASSTTTVMSPPRTRNYGIGLCLAGGTVAGITGLGGGSVLAPLLALLPSIPRQ- 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGL-----PPWSLGFVNIGAVLIILPISILITPL 250
              +   + L+   + +           L       W  G+VN+  VL +   ++L  PL
Sbjct: 176 -RIALYCNWLLLLGSAVTVTSYLLRTPPLGAVLPGAWQFGYVNLSVVLPVFACALLTQPL 234

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSF 276
           A +L   +   +    FS ++   + 
Sbjct: 235 AMQLRRRVSDSHQRQAFSGVLAGMAL 260


>gi|217960487|ref|YP_002339049.1| hypothetical protein BCAH187_A3099 [Bacillus cereus AH187]
 gi|217066240|gb|ACJ80490.1| putative membrane protein [Bacillus cereus AH187]
          Length = 300

 Score = 72.0 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 90/263 (34%), Gaps = 23/263 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A         
Sbjct: 1   MQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE-------V 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H + G ++   +        I   + +  +S++    +    ++F   +G+
Sbjct: 53  VTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFIGACFLSNLPGDVIKPYISVFLFTLGV 112

Query: 140 LMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            +L R     ++    K          G+  GF+    G G G  T  ++L  G    K 
Sbjct: 113 YILLRFIIQKQVVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLARGNEARKV 172

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             +       ++  A +    S GW            V+   V  ++   I+  P+A  L
Sbjct: 173 IGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFSLMLGGIVAAPIAAWL 222

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             ++    L +    ++  T+  
Sbjct: 223 VRIVPSHLLGVLVGGLIIFTNIR 245


>gi|320334388|ref|YP_004171099.1| hypothetical protein Deima_1786 [Deinococcus maricopensis DSM
           21211]
 gi|319755677|gb|ADV67434.1| protein of unknown function DUF81 [Deinococcus maricopensis DSM
           21211]
          Length = 250

 Score = 72.0 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 86/204 (42%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D +   +  +FL+G +  + G GGG + +P L     LMG+  +      + T+  +  
Sbjct: 4   LDVLLYGLPLAFLAGFIDAVAG-GGGTITLPTLF----LMGLPPAQV----VATNKLLAI 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  + +++ R G +   ++   I +  + + + + ++  VD +      A+  L +G 
Sbjct: 55  FGSGSATVQYWRAGHVEKPLVLRLIPLALLGSALGAFLVRFVDPNTFRALVAVVILAVGT 114

Query: 140 LMLKRDRLYCERKFPDNYVKYIW-----GMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
           L+L   R   E ++P    + +        V G   G LG G G F   L    G ++ +
Sbjct: 115 LVLVNKRFGLEDRYPGLTGRVLALTMPGAFVIGAYDGFLGPGTGTFLMFLFALAGMNLVR 174

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A+  +  ++      A L  +  G
Sbjct: 175 ASGNARTINFATNLGAFLFFLLGG 198


>gi|50057025|emb|CAF32664.1| hypothetical protein [Oenoccocus phage fOgPSU1]
          Length = 252

 Score = 72.0 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 101/266 (37%), Gaps = 30/266 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +IV   + GT   LFG GG  + + +L+           +    A  TSL  + P+ 
Sbjct: 3   VVFLIVIGLIVGTFVILFGGGGAAIYLGILTGVV-------GLNASTAASTSLVTVLPSL 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++    + R GTI  ++    +       ++ SL+ S++  +       I  +L+GI ML
Sbjct: 56  ILGVWTYYRQGTIKTRLGNQMLITAIPAVIIGSLISSYIPDNLYKWIVGIILILLGINML 115

Query: 143 KRDRLYCERKF-------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +               D +   I+G++ G + G  G+ GG      +   G S   A
Sbjct: 116 FQKQKSQVDPVMSKQINRKDRFKAGIFGIIGGLMVGVAGMSGGAPIIAGLFLIGLSTVNA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            ATSA V   ++    +  I                V+  A + ++  +++   +  +L 
Sbjct: 176 VATSAYVLVFMSAIGTVFHIVGSQ------------VDWNAGISLMVGALIGAAIGPRLL 223

Query: 256 YMIGK----KYLTIGFSMIMFTTSFV 277
             + K    KY+    +  +    F 
Sbjct: 224 TRLTKSKVGKYIKPVIAFFLVLLGFK 249



 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 42/120 (35%), Gaps = 12/120 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +   + G + G+ G+ GG  ++  L            +    A+ TS  V+   S +  +
Sbjct: 141 IFGIIGGLMVGVAGMSGGAPIIAGLFLI--------GLSTVNAVATSAYVLVFMSAIGTV 192

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHV----DKSFLNKAFAIFCLLMGILMLK 143
            H     ++       +    I   +   +++ +       ++    A F +L+G   L 
Sbjct: 193 FHIVGSQVDWNAGISLMVGALIGAAIGPRLLTRLTKSKVGKYIKPVIAFFLVLLGFKTLF 252


>gi|206974511|ref|ZP_03235427.1| putative membrane protein [Bacillus cereus H3081.97]
 gi|206747154|gb|EDZ58545.1| putative membrane protein [Bacillus cereus H3081.97]
          Length = 300

 Score = 72.0 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 90/263 (34%), Gaps = 23/263 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A         
Sbjct: 1   MQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE-------V 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H + G ++   +        I   V +  +S++    +    ++F   +G+
Sbjct: 53  VTTAASGASHLKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISVFLFTLGV 112

Query: 140 LMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            +L R     ++    K          G+  GF+    G G G  T  ++L  G    K 
Sbjct: 113 YILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLARGNEARKV 172

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             +       ++  A +    S GW            V+   V  ++   I+  P+A  L
Sbjct: 173 IGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFSLMLGGIVAAPIAAWL 222

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             ++    L +    ++  T+  
Sbjct: 223 VRIVPSHLLGVLVGGLIIFTNIR 245


>gi|258621399|ref|ZP_05716433.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|262171181|ref|ZP_06038859.1| hypothetical protein VII_001997 [Vibrio mimicus MB-451]
 gi|258586787|gb|EEW11502.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|261892257|gb|EEY38243.1| hypothetical protein VII_001997 [Vibrio mimicus MB-451]
          Length = 258

 Score = 72.0 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 94/264 (35%), Gaps = 28/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+       S
Sbjct: 9   FMVLALVAFIAGFIDAVAG-GGGMLTVPALLSL--------GLPPHLALGTNKLAATFAS 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R    +    K       I  ++ +L +S +   +L K   +  L   +  +
Sbjct: 60  STAAWTYYREKLFDPACWKRAFIATLIGAILGTLAVSAISTEWLRKVLPLVILAAALYTV 119

Query: 143 KRDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
               +  ++    +        + + G+  GF  G  G G G F T   M  Y  +I  A
Sbjct: 120 FHRPIQTQQTATPSPCPKLNRKQILQGLGLGFYDGLAGPGTGAFWTVSSMALYRFNILFA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++      +L+                LG ++    L +    +    +    +
Sbjct: 180 SGLAKAMNLTSNLTSLVTFAI------------LGHIDWLLGLTMGVCLMAGAFVGAHSA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G  ++   F +++   +   A
Sbjct: 228 IRFGAPFIRPLFILVVTLLAGKLA 251


>gi|148263500|ref|YP_001230206.1| hypothetical protein Gura_1432 [Geobacter uraniireducens Rf4]
 gi|146397000|gb|ABQ25633.1| protein of unknown function DUF81 [Geobacter uraniireducens Rf4]
          Length = 257

 Score = 72.0 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 98/260 (37%), Gaps = 25/260 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              ++ +    +G +  + G GGGL+ +PVL      +G+        A+GT+       
Sbjct: 12  LFPVLFLTGMFAGLVDSIAG-GGGLITIPVLL----GLGMPPQY----ALGTNKLQSTFG 62

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  +       G I++K     +        + +  +  +D  FL +      L + +  
Sbjct: 63  SASAMAHFAHAGVISLKESLAGVVWTACGAGLGAYTVQLLDPGFLRRVIPYLLLAIALYT 122

Query: 142 LKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   RL       +         +G++ GF  G LG G G F  + LML  G ++ KAT 
Sbjct: 123 LLSPRLGHEDVHPRLERKVFYLFFGLLLGFYDGFLGPGTGSFWVIALMLGLGHNMKKATG 182

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  ++ +    +L+V +              G V  GA L +     +   + ++L   
Sbjct: 183 YTKLMNFISNIVSLVVFVAG------------GHVYYGAGLAMGVGQAVGARVGSRLVLA 230

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
            G +++   F   +F  +  
Sbjct: 231 RGARFVRPIFIAAVFAVTAK 250


>gi|223044154|ref|ZP_03614192.1| conserved membrane protein YtnM [Staphylococcus capitis SK14]
 gi|222442415|gb|EEE48522.1| conserved membrane protein YtnM [Staphylococcus capitis SK14]
          Length = 299

 Score = 72.0 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +A FL+  + G  G+G G       S      GI  ++       T       T+
Sbjct: 4   VLIFAIAGFLAQLVDGSLGMGFGA----SSSSILLTYGIAPAVV----SATVHFSEIATT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H +   ++   L        I+  + + +++ +  +++    A+F L MG  +L
Sbjct: 56  AASGTSHWKFENVHKPTLLKLAIPGSISAFIGAGVLTFIHGNYIKPFIALFLLSMGFYIL 115

Query: 143 KRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKA 195
            +       +         ++     G + GFL    G G G     L+L         A
Sbjct: 116 YQFLFKRTHEHHTHVGDLSSFKVIPQGAIAGFLDAIGGGGWGPVNTPLLLSSKKIQPRYA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T +     +   A +  I             L  +N  AV+ +    +L  P++  L 
Sbjct: 176 IGTVSASEFFVTSSAAISFIIF---------LGLTQINWFAVIALSVGGMLAAPISAYLV 226

Query: 256 YMIGKKYLTIGFSMIMFTT 274
            ++    L I    ++  T
Sbjct: 227 KILPINILAICVGGLIIFT 245


>gi|153803554|ref|ZP_01958140.1| domain of unknown function, putative [Vibrio cholerae MZO-3]
 gi|124120906|gb|EAY39649.1| domain of unknown function, putative [Vibrio cholerae MZO-3]
          Length = 240

 Score = 72.0 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 76/203 (37%), Gaps = 16/203 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+       S
Sbjct: 9   IMVLALVAFIAGFIDAVAG-GGGMLTVPALLSL--------GLPPHLALGTNKLAATFAS 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R    +    K       I  ++ +L +  +   +L K   +  L   +  +
Sbjct: 60  STAAWTYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTV 119

Query: 143 KRDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
                  E+             + + G+  GF  G  G G G F T   M  Y  +I  A
Sbjct: 120 LHRPHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILLA 179

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
           +  +  ++    F +L+     G
Sbjct: 180 SGLAKAMNLTSNFTSLVTFAVLG 202


>gi|52550332|gb|AAU84181.1| hypothetical protein GZ37D1_28 [uncultured archaeon GZfos37D1]
          Length = 252

 Score = 72.0 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 95/260 (36%), Gaps = 24/260 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + + I     +G +SG+FG+GGG V +P+L+ A         + +  A G +L ++ 
Sbjct: 9   ITLVIIYICIGLFAGFMSGMFGIGGGAVRIPLLNLAG--------LPLLSAFGINLFIVP 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S++  +   +   I+ +I            ++ + +   +    L   F    +L+  
Sbjct: 61  FSSLVGAVS--QRANIDKEIALYLAVGGVFGALIGAFLAGLIPTFILAIIFFALSILIAF 118

Query: 140 LMLKRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            +     +     R    +   +        ++   G   G      +   G  I+KA A
Sbjct: 119 GIFLERIVPALAHRINFTHRAVFASSFFLSLIAAIRGGSAGSLFPAFLKAIGCDIHKAIA 178

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS  V+      A  +             WS G +     +  L  S++   L + +S  
Sbjct: 179 TSLCVTIFTCIGAAAIF------------WSRGDIIWWPAIFALIGSMIGARLGSAVSLK 226

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
               +L IG  M++   + +
Sbjct: 227 TKSIWLEIGLGMLVVALALI 246


>gi|260907045|ref|ZP_05915367.1| hypothetical protein BlinB_17054 [Brevibacterium linens BL2]
          Length = 266

 Score = 72.0 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 82/234 (35%), Gaps = 24/234 (10%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL+    L  +        A+ TSL ++  TS++S   H     +  +    +     
Sbjct: 41  VPVLTYITGLEPVQ-------AIPTSLFIVGVTSLVSLSLHAAKKRVVWRTGLIFGVAAM 93

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK----YIWGM 164
           +         ++V    L  +FA       I M++  R   ++      +        G 
Sbjct: 94  VGAFAGGRAGAYVPAPVLMLSFAAVMTAAAIAMIRGRRQTGDQHERPPELPISKVLATGA 153

Query: 165 VTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           V G +SG +G GGG      ++      + +A ATS  +  + +   L     S      
Sbjct: 154 VVGLVSGFVGAGGGFLIVPALVLLARLPMPRAVATSLLIITMQSASGLAGYALSTP---- 209

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                   ++    + I  +++  + +   LS  +  + L  GF   +   + V
Sbjct: 210 --------LDWSLAVAIAGLAVAGSFIGFWLSNRLPSQGLRKGFGFFVLAIAAV 255


>gi|23500891|ref|NP_700331.1| hypothetical protein BRA1178 [Brucella suis 1330]
 gi|62317994|ref|YP_223847.1| hypothetical protein BruAb2_1114 [Brucella abortus bv. 1 str.
           9-941]
 gi|83269971|ref|YP_419262.1| hypothetical protein BAB2_1137 [Brucella melitensis biovar Abortus
           2308]
 gi|161621221|ref|YP_001595107.1| hypothetical protein BCAN_B1209 [Brucella canis ATCC 23365]
 gi|189023246|ref|YP_001932987.1| Protein of unknown function DUF81 [Brucella abortus S19]
 gi|254691573|ref|ZP_05154827.1| hypothetical protein Babob68_15820 [Brucella abortus bv. 6 str.
           870]
 gi|254698229|ref|ZP_05160057.1| hypothetical protein Babob28_11090 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254702421|ref|ZP_05164249.1| hypothetical protein Bsuib36_00335 [Brucella suis bv. 3 str. 686]
 gi|254706459|ref|ZP_05168287.1| hypothetical protein BpinM_05582 [Brucella pinnipedialis
           M163/99/10]
 gi|254711856|ref|ZP_05173667.1| hypothetical protein BcetM6_00330 [Brucella ceti M644/93/1]
 gi|254714925|ref|ZP_05176736.1| hypothetical protein BcetM_00335 [Brucella ceti M13/05/1]
 gi|254731673|ref|ZP_05190251.1| hypothetical protein Babob42_10895 [Brucella abortus bv. 4 str.
           292]
 gi|256015937|ref|YP_003105946.1| hypothetical protein BMI_II1184 [Brucella microti CCM 4915]
 gi|256256759|ref|ZP_05462295.1| hypothetical protein Babob9C_05265 [Brucella abortus bv. 9 str.
           C68]
 gi|260166833|ref|ZP_05753644.1| hypothetical protein BruF5_00320 [Brucella sp. F5/99]
 gi|260544179|ref|ZP_05820000.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260568676|ref|ZP_05839145.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260757202|ref|ZP_05869550.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260759431|ref|ZP_05871779.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260762675|ref|ZP_05875007.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260883008|ref|ZP_05894622.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261216616|ref|ZP_05930897.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261313911|ref|ZP_05953108.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261319485|ref|ZP_05958682.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261752984|ref|ZP_05996693.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|261756211|ref|ZP_05999920.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|294853007|ref|ZP_06793679.1| hypothetical protein BAZG_01945 [Brucella sp. NVSL 07-0026]
 gi|297250114|ref|ZP_06933815.1| hypothetical protein BAYG_02899 [Brucella abortus bv. 5 str. B3196]
 gi|23464560|gb|AAN34336.1| membrane protein, putative [Brucella suis 1330]
 gi|62198187|gb|AAX76486.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941]
 gi|82940245|emb|CAJ13303.1| Protein of unknown function DUF81 [Brucella melitensis biovar
           Abortus 2308]
 gi|161338032|gb|ABX64336.1| protein of unknown function DUF81 [Brucella canis ATCC 23365]
 gi|189021820|gb|ACD74541.1| Protein of unknown function DUF81 [Brucella abortus S19]
 gi|255998597|gb|ACU50284.1| hypothetical protein BMI_II1184 [Brucella microti CCM 4915]
 gi|260097450|gb|EEW81324.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260155341|gb|EEW90422.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260669749|gb|EEX56689.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260673096|gb|EEX59917.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260677310|gb|EEX64131.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260872536|gb|EEX79605.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260921705|gb|EEX88273.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261292175|gb|EEX95671.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261302937|gb|EEY06434.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261736195|gb|EEY24191.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|261742737|gb|EEY30663.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|294818662|gb|EFG35662.1| hypothetical protein BAZG_01945 [Brucella sp. NVSL 07-0026]
 gi|297173983|gb|EFH33347.1| hypothetical protein BAYG_02899 [Brucella abortus bv. 5 str. B3196]
          Length = 289

 Score = 72.0 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 52/285 (18%), Positives = 95/285 (33%), Gaps = 49/285 (17%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + VA+F +  L G+ G+  G+ +VP+L+  F        I +HVA+  SL  +   S 
Sbjct: 13  LWLFVAAFGASMLGGMLGMASGIFIVPLLTSIF-------GIDIHVAIAASLISVIACSC 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S     +    N+++         +       +I  +  ++L   FAI  +L    ML 
Sbjct: 66  GSAAPLLKERLTNIRLAVVLETATTLGAFTGVFLIGVIPTAYLYLMFAIILVLSAWQMLV 125

Query: 144 RDRLYCERKFP--------------------DNYVKYIWGMV---------TGFLSGALG 174
           R R   +   P                      +  Y  G +          G +S  LG
Sbjct: 126 RRREMPQTNRPASRTWATLLRLHSAVPDRSSGKFTSYQVGSLPLGLSLMYGAGLVSALLG 185

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G+     M       I  ++ATS  +  +    +                +  G +N
Sbjct: 186 IGSGVLKIPAMDTALRLPIKVSSATSNFMIGVTGAASAGAY------------FMRGDIN 233

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 +   S+L      ++   I    L I F +++   +   
Sbjct: 234 TAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAIAM 278



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + L +   + +G +S L G+G G++ +P +  A +L        + V+  TS  +I 
Sbjct: 164 VGSLPLGLSLMYGAGLVSALLGIGSGVLKIPAMDTALRL-------PIKVSSATSNFMIG 216

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T   S   +   G IN  I         +  V  + +++ +    L   F I  +L+ I
Sbjct: 217 VTGAASAGAYFMRGDINTAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAI 276

Query: 140 LM 141
            M
Sbjct: 277 AM 278


>gi|314934688|ref|ZP_07842047.1| conserved hypothetical protein [Staphylococcus caprae C87]
 gi|313652618|gb|EFS16381.1| conserved hypothetical protein [Staphylococcus caprae C87]
          Length = 298

 Score = 72.0 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 88/259 (33%), Gaps = 25/259 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +A FL+  + G  G+G G       S      GI  ++       T       T+
Sbjct: 4   VLIFAIAGFLAQLVDGSLGMGFG-----ASSSILLTYGIAPAVV----SATVHFSEIATT 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H +   ++   +        I+  + + +++ +  +++    A+F L MG  +L
Sbjct: 55  AASGTSHWKFENVHKPTMLKLAIPGSISAFIGAGVLTFIHGNYIKPFIALFLLSMGFYIL 114

Query: 143 KRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKA 195
            +       +         ++     G + GFL    G G G     L+L         A
Sbjct: 115 YQFLFKRTHEHHTHVGDLSSFKVIPQGAIAGFLDAIGGGGWGPVNTPLLLSSKKIQPRYA 174

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T +     +   A +  I             L  +N  AV+ +    +L  P++  L 
Sbjct: 175 IGTVSASEFFVTSSAAISFIIF---------LGLTQINWFAVIALSVGGMLAAPISAYLV 225

Query: 256 YMIGKKYLTIGFSMIMFTT 274
            ++    L I    ++  T
Sbjct: 226 KILPINILAICVGGLIIFT 244


>gi|298710489|emb|CBJ25553.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 452

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 98/289 (33%), Gaps = 41/289 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGID-DSICMHVAMGTSLGVIAPTS 82
             +     L  T +   G+GG  +  PV    F L+G D     +  ++ T++   A   
Sbjct: 157 AFMFPVGILVATCAQTAGIGGAALTAPVFLLGFPLLGPDYPLHSVAASVATAILCEAFGF 216

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               + + R G I+      +I     + ++ +L++ + D+  L   +A+F L +   +L
Sbjct: 217 SSGLLGYFRRGLIDPGSALPFILASIPSCLLGALIVPYADERVLKAIYAVFMLGLSAYLL 276

Query: 143 KRDRLYCE-----------------------------RKFPDNYVKYIWGMVTGFLSGAL 173
             ++                                 RK        +     G ++G L
Sbjct: 277 LDEQGSESLVPEECSVEELESGDMKAICTSEGTEYIYRKPDFGTGSGLSTAFGGLMTGML 336

Query: 174 GVGGGIFTNLLML-FYGASIYKATATSAGVSALIAF--PALLVRIYSGWGLNGLPPWSLG 230
           GVG G      ++   G  +  A  TS  V  L A       +      G   +P     
Sbjct: 337 GVGIGEVVIPQLVKKNGVPLPVAAGTSILVVFLNAVVAAGTQIGGIVSRGGEDVPW---- 392

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             N+ A   I+P  ++   LA K+   + ++ +    + +       FA
Sbjct: 393 --NLIAF--IVPGVVIGGQLAPKMQGRLSQRTMEKVLAGVFGGVGVTFA 437


>gi|77459105|ref|YP_348611.1| hypothetical protein Pfl01_2880 [Pseudomonas fluorescens Pf0-1]
 gi|77383108|gb|ABA74621.1| putative membrane protein [Pseudomonas fluorescens Pf0-1]
          Length = 259

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 95/264 (35%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ + +F++G +  + G GGGL+  P L  A         +  H+ +GT+     
Sbjct: 9   LTTLAVLALVAFIAGFIDAIAG-GGGLLTTPALLTA--------GLPPHLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + K     I    +  +  +++  ++   +LNK   +     G+
Sbjct: 60  FGSATASFTFYRRKLFHPKQWMHAIVGTLVGALTGAIVAHYLPAEWLNKMLPVIVFACGL 119

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G   GF  G  G G G F T   +L Y   + KA
Sbjct: 120 YLLFGGTPKAPLDSDAPIKKKWQSTQGFSLGFYDGVAGPGTGAFWTVSSLLLYPIDLVKA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V ++SG             V+    L +    ++      + +
Sbjct: 180 SGVARSMNFVSNIAALSVFVFSGQ------------VDWIIGLSMGLSVMVGAFFGARTA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 ISGGAKFIRPVFITVVLGLTVRLA 251


>gi|262278983|ref|ZP_06056768.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262259334|gb|EEY78067.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 295

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 55/278 (19%), Positives = 94/278 (33%), Gaps = 44/278 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  L G   G+ GVGGG +M P+L   F+       I  H+A+GT L   A +    
Sbjct: 7   FILAGMLVGFCVGITGVGGGSLMTPILISLFR-------IEPHIAIGTDLLYAAISKFCG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
            M H R   I   I+          + VTS ++ H           L         L G+
Sbjct: 60  SMVHARKLNIVWPIVLWLAVGSIPASFVTSWVLEHYLSQSTHYKAVLTMVLGFMLTLTGV 119

Query: 140 LMLKRDRLYCERKFPD-----------------NYVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++ R R+                              I G++ G       VG G F  
Sbjct: 120 SIIFRSRIEKFFNRFRSKEVTQTENEQLAIHHKRLYIIIMGIILGVFVTLSSVGAGAFGI 179

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
           + ++       + +   +    + L+              + GL   S G V+   ++ +
Sbjct: 180 MALVIMFPNLPMIRIIGSDVVHAVLLTL------------VAGLGHMSAGNVDFTLLMWL 227

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L  SI    + T +S  + ++ +     + +F     F
Sbjct: 228 LVGSIPAIIVGTLISSRMPERLIRKILGITLFALGVNF 265



 Score = 40.8 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 46/122 (37%), Gaps = 6/122 (4%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             II+   + G    L  VG G   +  L   F       ++ M   +G+ +      ++
Sbjct: 154 LYIIIMGIILGVFVTLSSVGAGAFGIMALVIMF------PNLPMIRIIGSDVVHAVLLTL 207

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G ++  +L   +       +V +L+ S + +  + K   I    +G+  + 
Sbjct: 208 VAGLGHMSAGNVDFTLLMWLLVGSIPAIIVGTLISSRMPERLIRKILGITLFALGVNFMV 267

Query: 144 RD 145
             
Sbjct: 268 NP 269


>gi|51035327|emb|CAF32676.1| hypothetical protein [Oenococcus phage fOg30]
          Length = 252

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 101/266 (37%), Gaps = 30/266 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +IV   + GT   LFG GG  + + +L+           +    A  TSL  + P+ 
Sbjct: 3   VVFLIVIGLIVGTFVILFGGGGAAIYLGILTGVV-------GLNASTAASTSLVTVLPSL 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++    + R GTI  ++    +       ++ SL+ S++  +       I  +L+GI ML
Sbjct: 56  ILGVWTYYRQGTIKTRLGNQMLITAIPAVIIGSLISSYIPDNLYKWIVGIILILLGINML 115

Query: 143 KRDRLYCERKF-------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +               D +   I+G++ G + G  G+ GG      +   G S   A
Sbjct: 116 FQKQKSQVDPVMSKQINRKDRFKAGIFGIIGGLMVGVAGMNGGAPIIAGLFLIGLSTVNA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            ATSA V   ++    +  I                V+  A + ++  +++   +  +L 
Sbjct: 176 VATSAYVLVFMSAIGTVFHIVGSQ------------VDWNAGISLMVGALIGAAIGPRLL 223

Query: 256 YMIGK----KYLTIGFSMIMFTTSFV 277
             + K    KY+    +  +    F 
Sbjct: 224 TRLTKSKVGKYIKPVIAFFLVLLGFK 249



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 42/120 (35%), Gaps = 12/120 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +   + G + G+ G+ GG  ++  L            +    A+ TS  V+   S +  +
Sbjct: 141 IFGIIGGLMVGVAGMNGGAPIIAGLFLI--------GLSTVNAVATSAYVLVFMSAIGTV 192

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHV----DKSFLNKAFAIFCLLMGILMLK 143
            H     ++       +    I   +   +++ +       ++    A F +L+G   L 
Sbjct: 193 FHIVGSQVDWNAGISLMVGALIGAAIGPRLLTRLTKSKVGKYIKPVIAFFLVLLGFKTLF 252


>gi|169796062|ref|YP_001713855.1| hypothetical protein ABAYE1988 [Acinetobacter baumannii AYE]
 gi|213157207|ref|YP_002319252.1| hypothetical protein AB57_1890 [Acinetobacter baumannii AB0057]
 gi|215483518|ref|YP_002325735.1| hypothetical protein ABBFA_001832 [Acinetobacter baumannii
           AB307-0294]
 gi|260555109|ref|ZP_05827330.1| permease [Acinetobacter baumannii ATCC 19606]
 gi|301345321|ref|ZP_07226062.1| hypothetical protein AbauAB0_03734 [Acinetobacter baumannii AB056]
 gi|301510369|ref|ZP_07235606.1| hypothetical protein AbauAB05_02299 [Acinetobacter baumannii AB058]
 gi|301596343|ref|ZP_07241351.1| hypothetical protein AbauAB059_11026 [Acinetobacter baumannii
           AB059]
 gi|332851711|ref|ZP_08433636.1| hypothetical protein HMPREF0021_01208 [Acinetobacter baumannii
           6013150]
 gi|332865914|ref|ZP_08436694.1| hypothetical protein HMPREF0020_00300 [Acinetobacter baumannii
           6013113]
 gi|169148989|emb|CAM86866.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter baumannii AYE]
 gi|193077300|gb|ABO12092.2| putative membrane protein [Acinetobacter baumannii ATCC 17978]
 gi|213056367|gb|ACJ41269.1| putative membrane protein [Acinetobacter baumannii AB0057]
 gi|213988054|gb|ACJ58353.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
 gi|260411651|gb|EEX04948.1| permease [Acinetobacter baumannii ATCC 19606]
 gi|332729718|gb|EGJ61053.1| hypothetical protein HMPREF0021_01208 [Acinetobacter baumannii
           6013150]
 gi|332734964|gb|EGJ66050.1| hypothetical protein HMPREF0020_00300 [Acinetobacter baumannii
           6013113]
          Length = 295

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 93/278 (33%), Gaps = 44/278 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  L G   G+ GVGGG +M P+L   F+       I  H+A+GT L   A +    
Sbjct: 7   FILAGMLVGFCVGITGVGGGSLMTPILIGLFR-------IEPHIAIGTDLLYAAISKFCG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
            M H +   I   I+          +  T+ ++ H           L         L G+
Sbjct: 60  SMVHAKKLNIVWPIVLWLAVGSIPASFGTAWVLEHYLSQSTHYKAVLTMVLGFMLTLTGV 119

Query: 140 LMLKRDRLYCERK-----------------FPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++ R R+                              I G++ G       VG G F  
Sbjct: 120 SIIFRTRIEKFFNKFRNKENTQTENEQLAVQNKRTYIVIMGIILGVFVTLSSVGAGAFGI 179

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
           + ++       + +   +    + L+              + GL   S G V+   ++ +
Sbjct: 180 MALVIMFPNLPMIRIIGSDVVHAVLLTL------------VAGLGHMSAGNVDFVLLMWL 227

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L  SI    + T +S  + ++ +     + +F     F
Sbjct: 228 LVGSIPAIIIGTLISSRMPERLIRKILGITLFALGVNF 265



 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 49/128 (38%), Gaps = 7/128 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I++   + G    L  VG G   +  L   F       ++ M   +G+ +      ++
Sbjct: 154 TYIVIMGIILGVFVTLSSVGAGAFGIMALVIMF------PNLPMIRIIGSDVVHAVLLTL 207

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-ML 142
           ++ + H   G ++  +L   +       ++ +L+ S + +  + K   I    +G+  M+
Sbjct: 208 VAGLGHMSAGNVDFVLLMWLLVGSIPAIIIGTLISSRMPERLIRKILGITLFALGVNFMV 267

Query: 143 KRDRLYCE 150
              +   +
Sbjct: 268 HPVKAKPK 275


>gi|196032438|ref|ZP_03099852.1| putative membrane protein [Bacillus cereus W]
 gi|218904199|ref|YP_002452033.1| hypothetical protein BCAH820_3083 [Bacillus cereus AH820]
 gi|195995189|gb|EDX59143.1| putative membrane protein [Bacillus cereus W]
 gi|218539381|gb|ACK91779.1| putative membrane protein [Bacillus cereus AH820]
          Length = 300

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 90/263 (34%), Gaps = 23/263 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A         
Sbjct: 1   MQKLIIFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE-------V 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H + G ++   +        I   V +  +S++    +    ++F   +G+
Sbjct: 53  VTTAASGASHLKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISLFLFTLGV 112

Query: 140 LMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            +L R     ++    K          G+  GF+    G G G  T  ++L  G    K 
Sbjct: 113 YILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLARGNEARKV 172

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             +       +A  A +    S GW            V+   V  ++   I+  P+A  L
Sbjct: 173 IGSVDTSEFPVALAATIGFFISLGWEQ----------VSWFWVFALMLGGIVAAPIAAWL 222

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             ++    L +    ++  T+  
Sbjct: 223 VRIVPSHLLGVLVGGLIIFTNIR 245


>gi|4204415|gb|AAD10707.1| putative permease [Oenococcus phage fOg44]
 gi|57281911|emb|CAD19152.1| hypothetical protein [Oenococcus phage fOg44]
          Length = 252

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 99/266 (37%), Gaps = 30/266 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +IV   + GT   LFG GG  + + +L+           +    A  TSL  + P+ 
Sbjct: 3   VVFLIVIGLIVGTFVILFGGGGAAIYLGILTGVV-------GLNASTAASTSLVTVLPSL 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++    + R GTI  ++    +       ++ SL+ S++  +       I  +L+GI ML
Sbjct: 56  ILGVWTYYRQGTIKTRLGNQMLITAIPAVIIGSLISSYIPDNLYKWIVGIILILLGINML 115

Query: 143 KRDRLYCERKF-------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +                 +   I G++ G + G  G+ GG      +   G S   A
Sbjct: 116 FQKQKSQVDPVMSKQINRKGRFKAGICGIIGGLMVGVAGMSGGAPIIAGLFLIGLSTVNA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            ATSA V   ++    +  I                V+  A + ++  +++   +  +L 
Sbjct: 176 VATSAYVLVFMSAIGTVFHIVGSQ------------VDWNAGISLMVGALIGAAIGPRLL 223

Query: 256 YMIGK----KYLTIGFSMIMFTTSFV 277
             + K    KY+    +  +    F 
Sbjct: 224 TRLTKSKVGKYIKPVIAFFLVLLGFK 249



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 42/120 (35%), Gaps = 12/120 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +   + G + G+ G+ GG  ++  L            +    A+ TS  V+   S +  +
Sbjct: 141 ICGIIGGLMVGVAGMSGGAPIIAGLFLI--------GLSTVNAVATSAYVLVFMSAIGTV 192

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHV----DKSFLNKAFAIFCLLMGILMLK 143
            H     ++       +    I   +   +++ +       ++    A F +L+G   L 
Sbjct: 193 FHIVGSQVDWNAGISLMVGALIGAAIGPRLLTRLTKSKVGKYIKPVIAFFLVLLGFKTLF 252


>gi|283786405|ref|YP_003366270.1| hypothetical protein ROD_27391 [Citrobacter rodentium ICC168]
 gi|282949859|emb|CBG89482.1| putative exported protein [Citrobacter rodentium ICC168]
          Length = 270

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 97/237 (40%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  L G GGGL+ +P L       G+  +     A+ T+       
Sbjct: 14  LLVVLFFVAMLAGFIDSLAG-GGGLLTIPALM----AAGMSPAH----ALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +N+   K  I +  I ++  +L++ HV    L +   +  + +G+  
Sbjct: 65  SISASVYFIRRKVVNLADQKLNIAMTFIGSMSGALLVQHVQAEVLRQILPVLVICIGLYF 124

Query: 142 LKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L     +R+        I G   GF  G  G   G F  L  +   G ++ K+TA
Sbjct: 125 LLMPKLGEDDRQRRLYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGYNLAKSTA 184

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++A      LL+ +  G  +     W+ GFV       +L    L   + ++L
Sbjct: 185 HAKVLNATSNIGGLLLFMIGGKVI-----WATGFV-------MLIGQFLGARMGSRL 229


>gi|254711255|ref|ZP_05173066.1| hypothetical protein BpinB_13550 [Brucella pinnipedialis B2/94]
 gi|256030116|ref|ZP_05443730.1| hypothetical protein BpinM2_05610 [Brucella pinnipedialis
           M292/94/1]
 gi|261318849|ref|ZP_05958046.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|265987145|ref|ZP_06099702.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|261298072|gb|EEY01569.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|264659342|gb|EEZ29603.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
          Length = 289

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 93/285 (32%), Gaps = 49/285 (17%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + VA+F +  L G+ G+  G+ +VP+L+  F        I +HVA+  SL  +   S 
Sbjct: 13  LWLFVAAFGASMLGGMLGMASGIFIVPLLTSIF-------GIDIHVAIAASLISVIACSC 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S     +    N+++         +       +I  +  ++L   FAI  +L    ML 
Sbjct: 66  GSAAPLLKERLTNIRLAVVLETATTLGAFTGVFLIGVIPTAYLYLMFAIILVLSAWQMLV 125

Query: 144 RDRLYCERKFPDN-----------------------------YVKYIWGMVTGFLSGALG 174
           R R   +   P +                              +        G +S  LG
Sbjct: 126 RRREMPQTNRPASRTWATLLRLHSAVSDRSSGKFTSYQVGSLPLGLSLMYGAGLVSALLG 185

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G+     M       I  ++ATS  +  +    +                +  G +N
Sbjct: 186 IGSGVLKIPAMDTALRLPIKVSSATSNFMIGVTGAASAGAY------------FMRGDIN 233

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 +   S+L      ++   I    L I F +++   +   
Sbjct: 234 TAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAIAM 278



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + L +   + +G +S L G+G G++ +P +  A +L        + V+  TS  +I 
Sbjct: 164 VGSLPLGLSLMYGAGLVSALLGIGSGVLKIPAMDTALRL-------PIKVSSATSNFMIG 216

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T   S   +   G IN  I         +  V  + +++ +    L   F I  +L+ I
Sbjct: 217 VTGAASAGAYFMRGDINTAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAI 276

Query: 140 LM 141
            M
Sbjct: 277 AM 278


>gi|319401027|gb|EFV89246.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
          Length = 254

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 104/256 (40%), Gaps = 26/256 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +I+   F++  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   LSIMLMIVAFGFIASFIDSVVG-GGGLISTPALLAV--------GLPPSVALGTNKFASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +++ S ++  R G +++KI+     ++ + +   +++ +++  + L     I   L+ I
Sbjct: 56  FSTLTSALKFLRSGKVDLKIVGKMFPLIFVASGGGAIIATYIPANILKPLIIIALSLVLI 115

Query: 140 LMLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             + +      R F D       +  +  +V GF  G LG G G F    +L +G     
Sbjct: 116 YTIIQKDWGNVRTFTDFTFTKAVLFTLIFIVIGFYDGFLGGGTGSFMLFTLLLFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A   +  ++      ALL  +             LG VN    +I+    ++   L  + 
Sbjct: 176 AAGNAKVLNFASNCGALLFFMI------------LGQVNYFYGIIMASSMMIGALLGAQF 223

Query: 255 SYMIGKKYLTIGFSMI 270
           +   G +Y+   F ++
Sbjct: 224 ALKKGVRYVKALFIVV 239


>gi|225865031|ref|YP_002750409.1| hypothetical protein BCA_3138 [Bacillus cereus 03BB102]
 gi|225788042|gb|ACO28259.1| putative membrane protein [Bacillus cereus 03BB102]
          Length = 300

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 90/263 (34%), Gaps = 23/263 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A         
Sbjct: 1   MQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE-------V 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H + G ++   +        I   V +  +S++    +    ++F   +G+
Sbjct: 53  VTTAASGASHLKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISLFLFTLGV 112

Query: 140 LMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            +L R     ++    K          G+  GF+    G G G  T  ++L  G    K 
Sbjct: 113 YILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLARGNEARKV 172

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             +       ++  A +    S GW            V+   V  ++   I+  P+A  L
Sbjct: 173 IGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALMLGGIVAAPIAAWL 222

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             ++    L +    ++  T+  
Sbjct: 223 VRIVPSHLLGVLVGGLIIFTNIR 245


>gi|152975797|ref|YP_001375314.1| hypothetical protein Bcer98_2049 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152024549|gb|ABS22319.1| protein of unknown function DUF81 [Bacillus cytotoxicus NVH 391-98]
          Length = 299

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 90/263 (34%), Gaps = 23/263 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A         
Sbjct: 1   MQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE-------V 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H R G ++   +        I   V +  +S++    +    ++F   +G+
Sbjct: 53  VTTAASGFSHARFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISLFLFSLGV 112

Query: 140 LMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            +L R     ++        +      G+  GF+    G G G  T  ++L  G    K 
Sbjct: 113 YILLRFIIQKQIVTSNTRMSSKQLIPLGLFAGFIDSTGGGGWGPITTPVLLARGNEARKV 172

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             +       +A  A +    S GW            V+   V  ++   I+  P+A  L
Sbjct: 173 IGSVDTSEFPVALAATIGFFISLGWEQ----------VSWIWVFALMLGGIIAAPIAAWL 222

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             ++    L +    ++  T+  
Sbjct: 223 VRIVPSHLLGVLVGGLIIFTNIR 245


>gi|242242978|ref|ZP_04797423.1| membrane protein [Staphylococcus epidermidis W23144]
 gi|242233579|gb|EES35891.1| membrane protein [Staphylococcus epidermidis W23144]
          Length = 254

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 104/256 (40%), Gaps = 26/256 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +I+   F++  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   LSIMLMIVAFGFIASFVDSVVG-GGGLISTPALLAV--------GLPPSVALGTNKFASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +++ S ++  R G +++KI+     ++ + +   +++ +++  + L     I   L+ I
Sbjct: 56  FSTLTSALKFLRSGKVDLKIVGKMFPLIFVASGGGAIIATYIPANILKPLIIIALSLVLI 115

Query: 140 LMLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             + +      R F D       +  +  +V GF  G LG G G F    +L +G +   
Sbjct: 116 YTIIQKDWGNVRTFTDFTFTKAVLFTLIFIVIGFYDGFLGGGTGSFMLFTLLLFGFNFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A   +  ++      ALL  +             LG VN    +I+    ++   L  + 
Sbjct: 176 AAGNAKVLNFASNCGALLFFMI------------LGQVNYFYGIIMAFSMMIGALLGAQF 223

Query: 255 SYMIGKKYLTIGFSMI 270
           +     +Y+   F ++
Sbjct: 224 ALKKEVRYVKALFIVV 239


>gi|228959300|ref|ZP_04120995.1| hypothetical protein bthur0005_27880 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228800370|gb|EEM47292.1| hypothetical protein bthur0005_27880 [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 312

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 92/270 (34%), Gaps = 23/270 (8%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++    +  + +  +  F +  + G  G+  G V    L   F +     S  +H+A  
Sbjct: 6   IITGGFFMQKLIVFAIIGFFAQLIDGALGMAYG-VTSSSLLLMFGIAPAVASASVHLAE- 63

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                   T+  S   H + G ++   +        I   V +  +S++    +    ++
Sbjct: 64  ------VVTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISV 117

Query: 133 FCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F   +G+ +L R     ++    K          G+  GF+    G G G  T  ++L  
Sbjct: 118 FLFTLGVYILLRFIIQKQIVASNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPILLAR 177

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G    K   +       ++  A +    S GW            V+   V  ++   I+ 
Sbjct: 178 GNEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALMLGGIVA 227

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+A  L  ++    L +    ++  T+  
Sbjct: 228 APIAAWLVRIVPAHLLGVLVGGLIIFTNIR 257


>gi|306841240|ref|ZP_07473954.1| Hypothetical protein BIBO2_1024 [Brucella sp. BO2]
 gi|306288716|gb|EFM60041.1| Hypothetical protein BIBO2_1024 [Brucella sp. BO2]
          Length = 289

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 93/285 (32%), Gaps = 49/285 (17%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + VA+F +  L G+ G+  G+ +VP+L+  F        I +H+A+  SL  +   S 
Sbjct: 13  LWLFVAAFGASMLGGMLGMASGIFIVPLLTSIF-------GIDIHMAIAASLISVIACSC 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S     +    N+++         +       +I  +  ++L   FAI  +L    ML 
Sbjct: 66  GSAAPLLKERLTNIRLAVVLETATTLGAFTGVFLIGVIPTAYLYLMFAIILVLSAWQMLV 125

Query: 144 RDRLYCERKFPDN-----------------------------YVKYIWGMVTGFLSGALG 174
           R R   +   P +                              +        G +S  LG
Sbjct: 126 RRREMPQTNGPASRTWATLLRLHSAVPDRSSGKFTSYQVGSLPLGLSLMYGAGLVSALLG 185

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G+     M       I  ++ATS  +  +    +                +  G +N
Sbjct: 186 IGSGVLKIPAMDTALRLPIKVSSATSNFMIGVTGAASAGAY------------FMRGDIN 233

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 +   S+L      ++   I    L I F +++   +   
Sbjct: 234 TAIAGPVALGSVLGAVAGARILAGISGDKLRIFFVIVLVLLAIAM 278



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + L +   + +G +S L G+G G++ +P +  A +L        + V+  TS  +I 
Sbjct: 164 VGSLPLGLSLMYGAGLVSALLGIGSGVLKIPAMDTALRL-------PIKVSSATSNFMIG 216

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T   S   +   G IN  I         +  V  + +++ +    L   F I  +L+ I
Sbjct: 217 VTGAASAGAYFMRGDINTAIAGPVALGSVLGAVAGARILAGISGDKLRIFFVIVLVLLAI 276

Query: 140 LM 141
            M
Sbjct: 277 AM 278


>gi|229161953|ref|ZP_04289930.1| hypothetical protein bcere0009_27370 [Bacillus cereus R309803]
 gi|228621560|gb|EEK78409.1| hypothetical protein bcere0009_27370 [Bacillus cereus R309803]
          Length = 297

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 91/263 (34%), Gaps = 23/263 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A         
Sbjct: 1   MQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE-------V 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H + G ++   +        I   + +  +S++    +    +IF   +G+
Sbjct: 53  VTTAASGASHIKFGNVDNYTVSRLTLPGAIGAFIGACFLSNLPGDVIKPYISIFLFTLGV 112

Query: 140 LMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            +L R     ++   +K          G+  GF+    G G G  T  ++L  G    K 
Sbjct: 113 YILLRFLIQKKIVASKKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLARGNETRKV 172

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             +       ++  A +    S GW            V+   V  ++   I+  P+A  L
Sbjct: 173 IGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFSLMLGGIVAAPIAAWL 222

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             ++    L +    ++  T+  
Sbjct: 223 VRIVPSHLLGVLVGGLIIFTNIR 245


>gi|86360493|ref|YP_472381.1| hypothetical protein RHE_PE00219 [Rhizobium etli CFN 42]
 gi|86284595|gb|ABC93654.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 259

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 90/259 (34%), Gaps = 25/259 (9%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           ++  L G    L G GG ++ VP+L  A  L         H A+ TS   +A  +++S +
Sbjct: 13  LSGALVGFTLALLGGGGSILAVPLLVHAVGLTD------AHTAIATSAVAVASNALISLV 66

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            H R GT+  +    +     +  ++ + +   +D   L   F+   + + ILML+R   
Sbjct: 67  MHARRGTVIWRYAGLYCATGIVGALLGASIGKMLDGKHLLLYFSGLMIAIAILMLRRISA 126

Query: 148 YCER----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGV 202
             E     +  +       G   G +SG  G+GGG      ++F  G     A +TS   
Sbjct: 127 GSENSCVFERRNTTKVLAIGGGCGVVSGFFGIGGGFLIVPGLVFSTGMPTINAVSTSLVA 186

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK-- 260
                         SG             V+     + +        L   L + +    
Sbjct: 187 IVAFGSTTAATYSISGL------------VDWPLAAVFIAGGAFGAVLGCNLVHHLRPYQ 234

Query: 261 KYLTIGFSMIMFTTSFVFA 279
             L   F+  + T     A
Sbjct: 235 SALNSVFAGAILTFGIAMA 253



 Score = 35.8 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 14/121 (11%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY--GASIYKATATSAGVSALIAFPALLVRIYS 217
            + G + GF    LG GG I    L++        + A ATSA   A  A  +L++    
Sbjct: 12  TLSGALVGFTLALLGGGGSILAVPLLVHAVGLTDAHTAIATSAVAVASNALISLVMHARR 71

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G             V      +     I+   L   +  M+  K+L + FS +M   + +
Sbjct: 72  GT------------VIWRYAGLYCATGIVGALLGASIGKMLDGKHLLLYFSGLMIAIAIL 119

Query: 278 F 278
            
Sbjct: 120 M 120


>gi|42782158|ref|NP_979405.1| hypothetical protein BCE_3102 [Bacillus cereus ATCC 10987]
 gi|42738083|gb|AAS42013.1| membrane protein, putative [Bacillus cereus ATCC 10987]
          Length = 300

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 90/263 (34%), Gaps = 23/263 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A         
Sbjct: 1   MQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE-------V 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H + G ++   +        I   V +  +S++    +    ++F   +G+
Sbjct: 53  VTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISVFLFTLGV 112

Query: 140 LMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            +L R     ++    K          G+  GF+    G G G  T  ++L  G    K 
Sbjct: 113 YILLRFIIQKQVITSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLARGNEARKV 172

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             +       ++  A +    S GW            V+   V  ++   I+  P+A  L
Sbjct: 173 IGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFSLMLGGIVAAPIAAWL 222

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             ++    L I    ++  T+  
Sbjct: 223 VRIVPSHLLGILVGGLIIFTNIR 245


>gi|325262312|ref|ZP_08129049.1| hypothetical protein HMPREF0240_01296 [Clostridium sp. D5]
 gi|324032144|gb|EGB93422.1| hypothetical protein HMPREF0240_01296 [Clostridium sp. D5]
          Length = 258

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 104/268 (38%), Gaps = 24/268 (8%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++  I + + A   +G  +GL G+    V+ P+L         +       A+G SL  
Sbjct: 1   MMIAKILVCLAAGMGAGIGTGLAGLSAAAVISPMLITFLGFDAYE-------AVGISLAS 53

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
               S +S   + +H  +++K     +  + + T+  S + S V  + +        LL+
Sbjct: 54  DVLASAVSAYTYGKHKNLDIKNGVVMLCTVLVFTLFGSYIASLVPNTTMGSFSVFMTLLL 113

Query: 138 GILMLKRDRLYCERKFPDNYVKY------IWGMVTGFLSGALGVGGGIFTNLLML-FYGA 190
           GI  + +  +  + K  +   +       + G+V GF+ G +G GGG+   L++    G 
Sbjct: 114 GIKFIVKPVMTTKEKQEEKSTRTKVIQSILCGIVIGFICGFIGAGGGMMMLLMLTSILGY 173

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            +  A  TS  + A  AF   +       GL            I A+++ +  +++   +
Sbjct: 174 ELKTAVGTSVFIMAFTAFTGAVSHFSISGGLPD----------IQALVLCILFTLIGARV 223

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           A K +     K L     +++       
Sbjct: 224 AAKFANKAPAKTLNRATGIVLSVLGIAM 251


>gi|167461961|ref|ZP_02327050.1| hypothetical protein Plarl_05295 [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322384651|ref|ZP_08058329.1| hypothetical protein PL1_2161 [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321150536|gb|EFX44017.1| hypothetical protein PL1_2161 [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 277

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 90/262 (34%), Gaps = 48/262 (18%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++ P L+  F        + +  A+G S+  +  TS  S + + R    N+++      
Sbjct: 26  IIVTPALTLLF-------GVDIKHAIGASIISVIATSSGSAIAYIRDQITNVRVGMFLEI 78

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP----------- 154
              I  V  +++   +    L   F +  L   + M+K+ +     + P           
Sbjct: 79  ATTIGAVTGAIIGGLIAPGALYVIFGLLLLYSALAMIKKGKDELPAEVPLHPVAEKLKLH 138

Query: 155 -----------------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKAT 196
                            + Y  +      G +SG LG+G G F  + M +F    +  ++
Sbjct: 139 NHYYDKALQQNVSYNVDNVYGGFGVMYGAGIISGLLGIGSGSFKVMAMDVFMKLPLKVSS 198

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           ATS  +  + A  +  + ++ G    G+               +    ++   + T++  
Sbjct: 199 ATSNFMMGVTAAASAGIYLFRGDIDPGIS------------APVALGVLIGATVGTRIMQ 246

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            +  K +   F  I+   S   
Sbjct: 247 RLKSKTIRKLFIPILIYVSIQM 268



 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G +SGL G+G G       S     M +   + + V+  TS  ++  T+  S   +   
Sbjct: 167 AGIISGLLGIGSG-------SFKVMAMDVFMKLPLKVSSATSNFMMGVTAAASAGIYLFR 219

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           G I+  I       + I   V + ++  +    + K F    + + I M+ +
Sbjct: 220 GDIDPGISAPVALGVLIGATVGTRIMQRLKSKTIRKLFIPILIYVSIQMILQ 271


>gi|302381431|ref|YP_003817254.1| hypothetical protein Bresu_0316 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302192059|gb|ADK99630.1| protein of unknown function DUF81 [Brevundimonas subvibrioides ATCC
           15264]
          Length = 259

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 85/246 (34%), Gaps = 17/246 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L ++   ++  + G  G+  G++     S      G+  +     A  +  G   
Sbjct: 1   MDTFFLFLLVGVVAQAVDGALGMAYGVIS----SSVLLAFGVPPAT----ASASVHGAEV 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H  H  +  ++L        I   + + +++ +D   +      +   MG 
Sbjct: 53  FTTAASAGSHIWHRNVEWRLLVPLAVAGVIGGCLGAYVLAGLDGDVIKPFIVAYLAGMGC 112

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            +L R     + +    ++    G+V GF     G G G   +  M+  GA   +A  T 
Sbjct: 113 YILYRATRDQKPRHIPRWLVAPLGLVGGFFDAIGGGGWGPTVSSAMVGAGAEPRRAIGTV 172

Query: 200 AGVSALIAFPALLVRIYS----GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
                 +        +++     W             ++ AV  ++   ++  P A  ++
Sbjct: 173 NTAEFFLTVAISATFVWALMTGHWKDADALEN-----HLPAVAGLVVGGLMAAPFAGWIT 227

Query: 256 YMIGKK 261
             + ++
Sbjct: 228 KTVPQR 233


>gi|310825717|ref|YP_003958074.1| putative transporter [Eubacterium limosum KIST612]
 gi|308737451|gb|ADO35111.1| putative transporter [Eubacterium limosum KIST612]
          Length = 256

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 99/264 (37%), Gaps = 25/264 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++    +  +A   +G  +G  G+    V+ P+L            I  + A+G +L   
Sbjct: 1   MLFKFIICFIAGIGAGLGTGFAGMSAAAVISPMLITFL-------GIPAYEAVGIALASD 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              S +S   + +H  +++K     +  +   T+V S + S V  + +        LL+G
Sbjct: 54  VLASAVSAYTYGKHKNLDIKNGLVMMAAVLCFTLVGSWISSLVPSTAMGGFSVFMTLLLG 113

Query: 139 ILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
           I  + +  +  +    D   +       + GM  GF+ G +G GGG+   L++    G  
Sbjct: 114 IKFIVKPVMTTKDSMTDTSPQKRFVQSVVCGMAIGFICGFVGAGGGMMMLLILTSVLGYE 173

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           +  A  TS  V A  AF   +     G   +           + +++  +  ++L   +A
Sbjct: 174 LKIAVGTSVFVMAFTAFTGAVSHFAIGGPPD-----------VWSLVFCVLSTLLWARIA 222

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTS 275
            K +       L     +++    
Sbjct: 223 AKFANKASPIVLNRATGVVLSVLG 246


>gi|324327017|gb|ADY22277.1| hypothetical protein YBT020_15235 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 300

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 90/263 (34%), Gaps = 23/263 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A         
Sbjct: 1   MQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE-------V 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H + G ++   +        I   V +  +S++    +    ++F   +G+
Sbjct: 53  VTTAASGASHLKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISVFLFTLGV 112

Query: 140 LMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            +L R     ++    K          G+  GF+    G G G  T  ++L  G    K 
Sbjct: 113 YILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLARGNEARKV 172

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             +       ++  A +    S GW            V+   V  ++   I+  P+A  L
Sbjct: 173 IGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFSLMLGGIVAAPIAAWL 222

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             ++    L +    ++  T+  
Sbjct: 223 VRIVPSHLLGVLVGGLIIFTNIR 245


>gi|313206800|ref|YP_004045977.1| hypothetical protein Riean_1314 [Riemerella anatipestifer DSM
           15868]
 gi|312446116|gb|ADQ82471.1| protein of unknown function DUF81 [Riemerella anatipestifer DSM
           15868]
 gi|315023873|gb|EFT36875.1| hypothetical protein RAYM_00625 [Riemerella anatipestifer RA-YM]
 gi|325335760|gb|ADZ12034.1| Protein of unknown function DUF81 [Riemerella anatipestifer RA-GD]
          Length = 264

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 7/122 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+I    L G ++GL G GGG +++P L            + M  A+GTSL +I  +S 
Sbjct: 146 TLLISQGLLVGIITGLVGAGGGFLIIPALVMIL-------GLKMKEAIGTSLFIITLSST 198

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + F+       I+   L  +  +  +  ++   +   VD   L  AF  F L MG+ +L 
Sbjct: 199 IGFVSSLDKVAIDWYFLLSFTGLSILGVLLGLALSKRVDGKKLKPAFGWFVLGMGVYILI 258

Query: 144 RD 145
           ++
Sbjct: 259 KE 260



 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 89/250 (35%), Gaps = 37/250 (14%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VPV +  F L  +  +         SL V+A   ++  + H +   I++     +  
Sbjct: 25  ILSVPVFAYLFALDAVTSTTL-------SLFVVACNGLVGSLGHFKEKQIHLNTALLFGI 77

Query: 106 VLPITTVVT-SLMISHVDK-------------SFLNKAFAIFCLLMGILMLKRDRLYC-- 149
              +  + +  +++ H+ +              FL   FA   LL    M+ R +     
Sbjct: 78  PSVLGVLFSRRVVVPHLPEYIINRWGICLTKDMFLLILFASLMLLASYKMIVRSKTEPST 137

Query: 150 -ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIA 207
            E     N +    G++ G ++G +G GGG      ++   G  + +A  TS     +I 
Sbjct: 138 LEISPSRNTLLISQGLLVGIITGLVGAGGGFLIIPALVMILGLKMKEAIGTSL---FIIT 194

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
             + +  + S   +          ++   +L    +SIL   L   LS  +  K L   F
Sbjct: 195 LSSTIGFVSSLDKVA---------IDWYFLLSFTGLSILGVLLGLALSKRVDGKKLKPAF 245

Query: 268 SMIMFTTSFV 277
              +      
Sbjct: 246 GWFVLGMGVY 255


>gi|49479544|ref|YP_037156.1| hypothetical protein BT9727_2831 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|196042898|ref|ZP_03110137.1| putative membrane protein [Bacillus cereus 03BB108]
 gi|300117687|ref|ZP_07055468.1| hypothetical protein BCSJ1_02265 [Bacillus cereus SJ1]
 gi|301054570|ref|YP_003792781.1| membrane protein [Bacillus anthracis CI]
 gi|49331100|gb|AAT61746.1| conserved hypothetical protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|196026382|gb|EDX65050.1| putative membrane protein [Bacillus cereus 03BB108]
 gi|298724917|gb|EFI65578.1| hypothetical protein BCSJ1_02265 [Bacillus cereus SJ1]
 gi|300376739|gb|ADK05643.1| conserved hypothetical membrane protein [Bacillus cereus biovar
           anthracis str. CI]
          Length = 300

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 90/263 (34%), Gaps = 23/263 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A         
Sbjct: 1   MQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE-------V 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H + G ++   +        I   V +  +S++    +    ++F   +G+
Sbjct: 53  VTTAASGASHLKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISLFLFTLGV 112

Query: 140 LMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            +L R     ++    K          G+  GF+    G G G  T  ++L  G    K 
Sbjct: 113 YILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLARGNEARKV 172

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             +       +A  A +    S GW            V+   V  ++   I+  P+A  L
Sbjct: 173 IGSVDTSEFPVALAATIGFFISLGWEQ----------VSWFWVFALMLGGIVAAPIAAWL 222

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             ++    L +    ++  T+  
Sbjct: 223 VRIVPSHLLGVLVGGLIIFTNIR 245


>gi|163940792|ref|YP_001645676.1| hypothetical protein BcerKBAB4_2854 [Bacillus weihenstephanensis
           KBAB4]
 gi|163862989|gb|ABY44048.1| protein of unknown function DUF81 [Bacillus weihenstephanensis
           KBAB4]
          Length = 300

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 90/263 (34%), Gaps = 23/263 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A         
Sbjct: 1   MQKLIVFAIIGFFAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE-------V 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H + G ++   +        I   + +  +S++    +    +IF   +G+
Sbjct: 53  VTTAASGASHIKFGNVDKYTVSRLTLPGAIGAFIGACFLSNLPGDVIKPYISIFLFTLGV 112

Query: 140 LMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            +L R     ++    K          G+  GF+    G G G  T  ++L  G    K 
Sbjct: 113 YILLRFIIQKQIVSSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLARGNEARKV 172

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             +       ++  A +    S GW            V+   V  ++   I+  P+A  L
Sbjct: 173 IGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALMLGGIVAAPIAAWL 222

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             ++    L +    ++  T+  
Sbjct: 223 VRIVPSHLLGVLVGGLIIFTNIR 245


>gi|16761306|ref|NP_456923.1| hypothetical protein STY2614 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16765709|ref|NP_461324.1| hypothetical protein STM2382 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29140998|ref|NP_804340.1| hypothetical protein t0482 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56412721|ref|YP_149796.1| hypothetical protein SPA0482 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62180954|ref|YP_217371.1| hypothetical protein SC2384 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161612882|ref|YP_001586847.1| hypothetical protein SPAB_00588 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167549611|ref|ZP_02343370.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167993071|ref|ZP_02574166.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168229757|ref|ZP_02654815.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168237407|ref|ZP_02662465.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168242508|ref|ZP_02667440.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168261594|ref|ZP_02683567.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168817880|ref|ZP_02829880.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194443451|ref|YP_002041647.1| hypothetical protein SNSL254_A2571 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194451205|ref|YP_002046438.1| hypothetical protein SeHA_C2624 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194469436|ref|ZP_03075420.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194736462|ref|YP_002115452.1| hypothetical protein SeSA_A2611 [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197265880|ref|ZP_03165954.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197361655|ref|YP_002141291.1| hypothetical protein SSPA0446 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198245940|ref|YP_002216454.1| hypothetical protein SeD_A2735 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200387940|ref|ZP_03214552.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204929142|ref|ZP_03220285.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205353495|ref|YP_002227296.1| hypothetical protein SG2412 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207857800|ref|YP_002244451.1| hypothetical protein SEN2364 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213161567|ref|ZP_03347277.1| hypothetical protein Salmoneentericaenterica_16742 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213426184|ref|ZP_03358934.1| hypothetical protein SentesTyphi_11439 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213582771|ref|ZP_03364597.1| hypothetical protein SentesTyph_16818 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213854939|ref|ZP_03383179.1| hypothetical protein SentesT_12990 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224583129|ref|YP_002636927.1| hypothetical protein SPC_1323 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238912339|ref|ZP_04656176.1| hypothetical protein SentesTe_14566 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|25512309|pir||AD0804 probable membrane protein STY2614 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16420926|gb|AAL21283.1| putative permease [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|16503605|emb|CAD07614.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29136623|gb|AAO68189.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56126978|gb|AAV76484.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62128587|gb|AAX66290.1| putative permease [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161362246|gb|ABX66014.1| hypothetical protein SPAB_00588 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402114|gb|ACF62336.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194409509|gb|ACF69728.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194455800|gb|EDX44639.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194711964|gb|ACF91185.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197093131|emb|CAR58575.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197244135|gb|EDY26755.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197289674|gb|EDY29037.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197940456|gb|ACH77789.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199605038|gb|EDZ03583.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204321686|gb|EDZ06885.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205273276|emb|CAR38241.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205325176|gb|EDZ13015.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205328841|gb|EDZ15605.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205335606|gb|EDZ22370.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205338623|gb|EDZ25387.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205344829|gb|EDZ31593.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205349564|gb|EDZ36195.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206709603|emb|CAR33948.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224467656|gb|ACN45486.1| hypothetical protein SPC_1323 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261247588|emb|CBG25415.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267994485|gb|ACY89370.1| hypothetical protein STM14_2931 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301158940|emb|CBW18453.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312913373|dbj|BAJ37347.1| hypothetical protein STMDT12_C24040 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320086815|emb|CBY96587.1| UPF0721 transmembrane protein yfcA [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321222916|gb|EFX47987.1| Putative membrane protein YfcA [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322617127|gb|EFY14033.1| hypothetical protein SEEM315_08925 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322617568|gb|EFY14467.1| hypothetical protein SEEM971_01774 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322624803|gb|EFY21632.1| hypothetical protein SEEM973_01477 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322630353|gb|EFY27123.1| hypothetical protein SEEM974_07826 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322634533|gb|EFY31266.1| hypothetical protein SEEM201_19831 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322639244|gb|EFY35936.1| hypothetical protein SEEM202_09119 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322640107|gb|EFY36774.1| hypothetical protein SEEM954_16399 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645675|gb|EFY42199.1| hypothetical protein SEEM054_15878 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322652037|gb|EFY48400.1| hypothetical protein SEEM675_01047 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322656210|gb|EFY52507.1| hypothetical protein SEEM965_15239 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322659362|gb|EFY55609.1| hypothetical protein SEEM19N_01588 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322665822|gb|EFY62005.1| hypothetical protein SEEM801_10251 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669940|gb|EFY66081.1| hypothetical protein SEEM507_14330 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673925|gb|EFY70022.1| hypothetical protein SEEM877_08699 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322678684|gb|EFY74740.1| hypothetical protein SEEM867_09442 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322683522|gb|EFY79536.1| hypothetical protein SEEM180_09851 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322687597|gb|EFY83567.1| hypothetical protein SEEM600_13272 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322715434|gb|EFZ07005.1| UPF0721 transmembrane protein yfcA [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323130715|gb|ADX18145.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323193569|gb|EFZ78774.1| hypothetical protein SEEM581_00980 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198476|gb|EFZ83578.1| hypothetical protein SEEM501_10392 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204588|gb|EFZ89591.1| hypothetical protein SEEM460_00270 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208474|gb|EFZ93413.1| hypothetical protein SEEM020_08746 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213612|gb|EFZ98401.1| hypothetical protein SEEM6152_06868 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323218353|gb|EGA03063.1| hypothetical protein SEEM0077_15686 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219262|gb|EGA03755.1| hypothetical protein SEEM0047_18957 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323232348|gb|EGA16451.1| hypothetical protein SEEM0052_09516 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235619|gb|EGA19703.1| hypothetical protein SEEM3312_11846 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323241222|gb|EGA25258.1| hypothetical protein SEEM5258_16804 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323244964|gb|EGA28966.1| hypothetical protein SEEM1156_21637 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323250083|gb|EGA33977.1| hypothetical protein SEEM9199_06436 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323255004|gb|EGA38795.1| hypothetical protein SEEM8283_18515 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262795|gb|EGA46346.1| hypothetical protein SEEM8284_08954 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323264170|gb|EGA47677.1| hypothetical protein SEEM8285_16523 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270868|gb|EGA54306.1| hypothetical protein SEEM8287_08765 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326624206|gb|EGE30551.1| UPF0721 transmembrane protein yfcA [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326628588|gb|EGE34931.1| Putative membrane protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
 gi|332989315|gb|AEF08298.1| hypothetical protein STMUK_2412 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 269

 Score = 71.6 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLVVLFFVAVLAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S +   R   +N+   K  I +  I ++  +L++ HV    L +   I  + +G+  
Sbjct: 65  SLSSSLYFIRRKVVNLAEQKLNILMTFIGSMSGALLVQHVQADILRQILPILVIFIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G   G F  L  +   G ++ K+TA
Sbjct: 125 LLMPKLGEEDRQRRLYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGYNLAKSTA 184

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++A      LL+ I  G  +     W+ GFV       +L    L   + ++L
Sbjct: 185 HAKVLNATSNVGGLLLFIIGGKVI-----WATGFV-------MLVGQFLGARMGSRL 229


>gi|161502474|ref|YP_001569586.1| hypothetical protein SARI_00518 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863821|gb|ABX20444.1| hypothetical protein SARI_00518 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 269

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLVVLFFVAVLAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S +   R   +N+   K  I +  I ++  +L++ HV    L +   I  + +G+  
Sbjct: 65  SLSSSLYFIRRKVVNLAEQKLNILMTFIGSMSGALLVQHVQADILRQILPILVIFIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G   G F  L  +   G ++ K+TA
Sbjct: 125 LLMPKLGEEDRQRRLYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGYNLAKSTA 184

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++A      LL+ I  G  +     W+ GFV       +L    L   + ++L
Sbjct: 185 HAKVLNATSNVGGLLLFIIGGKVI-----WATGFV-------MLVGQFLGARMGSRL 229


>gi|148977565|ref|ZP_01814144.1| predicted permease [Vibrionales bacterium SWAT-3]
 gi|145963216|gb|EDK28483.1| predicted permease [Vibrionales bacterium SWAT-3]
          Length = 259

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 87/266 (32%), Gaps = 28/266 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F +G +  + G GGG++ VP L            +  H+A+GT+      
Sbjct: 7   TMLVILALVAFAAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + R      +   +      I   + +L +  +   +L K   +  L   I 
Sbjct: 58  ASSTAAFTYYRKKLFKPECWINAFIATLIGATIGTLTVDAISTQWLEKVLPLIILAAAIY 117

Query: 141 MLKRDRLYCERKFPDNYVKYIW------GMVTGFLSGALGVGGGIF-TNLLMLFYGASIY 193
            +                  +       G + GF  G  G G G F T   M  Y  +I 
Sbjct: 118 TIFHKTPNANHNVSPKPCPVLKKKQKYQGFILGFYDGVAGPGTGAFWTVSSMALYRLNIL 177

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+  S  ++    F +L+                LG ++    L +    +    +   
Sbjct: 178 LASGLSKAMNFTSNFTSLVTFAI------------LGHIDWVLGLTMGVCLMAGAFVGAH 225

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +   G  ++   F  ++   +   A
Sbjct: 226 SAIRFGATFIRPVFVTVVSILAIKLA 251


>gi|306845463|ref|ZP_07478037.1| Hypothetical protein BIBO1_2151 [Brucella sp. BO1]
 gi|306274206|gb|EFM56022.1| Hypothetical protein BIBO1_2151 [Brucella sp. BO1]
          Length = 289

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 93/285 (32%), Gaps = 49/285 (17%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + VA+F +  L G+ G+  G+ +VP+L+  F        I +H+A+  SL  +   S 
Sbjct: 13  LWLFVAAFGASMLGGMLGMASGIFIVPLLTSIF-------GIDIHMAIAASLISVIACSC 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S     +    N+++         +       +I  +  ++L   FAI  +L    ML 
Sbjct: 66  GSAAPLLKERLTNIRLAVVLETATTLGAFTGVFLIGVIPTAYLYLMFAIILVLSAWQMLV 125

Query: 144 RDRLYCERKFPDN-----------------------------YVKYIWGMVTGFLSGALG 174
           R R   +   P +                              +        G +S  LG
Sbjct: 126 RRREMPQTNGPASRTWATLLRLHSAVPDRSSGKFTSYQVGSLPLGLSLMYGAGLVSALLG 185

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G+     M       I  ++ATS  +  +    +                +  G +N
Sbjct: 186 IGSGVLKIPAMDTALRLPIKVSSATSNFMIGVTGAASAGAY------------FMRGDIN 233

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 +   S+L      ++   I    L I F +++   +   
Sbjct: 234 TAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAIAM 278



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + L +   + +G +S L G+G G++ +P +  A +L        + V+  TS  +I 
Sbjct: 164 VGSLPLGLSLMYGAGLVSALLGIGSGVLKIPAMDTALRL-------PIKVSSATSNFMIG 216

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T   S   +   G IN  I         +  V  + +++ +    L   F I  +L+ I
Sbjct: 217 VTGAASAGAYFMRGDINTAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAI 276

Query: 140 LM 141
            M
Sbjct: 277 AM 278


>gi|240144880|ref|ZP_04743481.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
 gi|257203077|gb|EEV01362.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
 gi|291535901|emb|CBL09013.1| Predicted permeases [Roseburia intestinalis M50/1]
 gi|291538397|emb|CBL11508.1| Predicted permeases [Roseburia intestinalis XB6B4]
          Length = 254

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 102/266 (38%), Gaps = 25/266 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  I +   A   +G  +G  G+    V+ P+L      +G+D     ++A+G +L   
Sbjct: 3   MLLTIIVTFFAGMGAGLGTGFAGMSAAAVISPMLI---TFLGMDP----YMAVGIALSSD 55

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              S +S   + ++  ++++     +  + + TV  S + S V  + +         L+G
Sbjct: 56  VLASAVSAYTYGKNKNLDIRNGIIMMVSVLLFTVFGSYVSSLVPSAAMGNFSVFMTFLLG 115

Query: 139 ILMLKRDRLYCERKFPD------NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
           I  + R  +  +                I G++ GF+ G +G GGG+   L++    G  
Sbjct: 116 IKFIVRPVMTTKEAMQGVSAEKRAVQSVICGVLIGFICGFVGAGGGMMMLLILTSVLGYE 175

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           +  A  TS  +    A          G    G P W++       +++ +  +++   +A
Sbjct: 176 LKTAVGTSVFIMTFTALTGAASHFAIG----GAPDWTV-------LILCVVFTLIWARIA 224

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
              +     K L     +I+     V
Sbjct: 225 AVFANKATPKTLNRATGVILVILGLV 250


>gi|167760573|ref|ZP_02432700.1| hypothetical protein CLOSCI_02947 [Clostridium scindens ATCC 35704]
 gi|167661794|gb|EDS05924.1| hypothetical protein CLOSCI_02947 [Clostridium scindens ATCC 35704]
          Length = 256

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 92/265 (34%), Gaps = 25/265 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++    +  +A   +G  +G  G+    V+ P+L            I  + A+G +L   
Sbjct: 1   MLTKFIVCFIAGIGAGLGTGFAGMSAAAVISPMLITFLH-------IPAYEAVGIALSSD 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              S +S   + +H  +++K     +  +   T+V S + S V    +        LL+G
Sbjct: 54  VLASAVSAYTYGKHKNLDIKNGIVMMISVLCFTLVGSYISSLVPSHAMGGFSVFMTLLLG 113

Query: 139 ILMLKRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
           I  + R  +  +                  GM+ GF+ G +G GGG+   L++    G  
Sbjct: 114 IKFIVRPVMTTKESMEAVSPKKRFIQSIFCGMLIGFICGFVGAGGGMMMLLILTSVLGYE 173

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           +  A  TS  +    AF   +     G           G  +   +   +  + L   +A
Sbjct: 174 LKTAVGTSVFIMTFTAFTGAVSHFAIG-----------GAPDWWCMAFCILSTFLWARVA 222

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSF 276
            K +       L     +++     
Sbjct: 223 AKFANKTSPIILNRATGVVLSVLGI 247


>gi|15614021|ref|NP_242324.1| hypothetical protein BH1459 [Bacillus halodurans C-125]
 gi|10174075|dbj|BAB05177.1| BH1459 [Bacillus halodurans C-125]
          Length = 285

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 84/233 (36%), Gaps = 24/233 (10%)

Query: 52  LSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITT 111
           L+    L G   ++     +GTSL +   TS+     H R   I+   +        + T
Sbjct: 28  LTPLLLLFGFPPAVV----IGTSLMLSLGTSLGGAWAHFRMKNIHWSHVFIINSAGIVGT 83

Query: 112 VVTSLMISHVDKSFLN-------KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM 164
            +   ++  +++  L          F +      +L+ +  R    R  P+  +    G+
Sbjct: 84  QLAVPLMLFLEERQLAEITISLCYIFLLGFFASSMLIPQTKRKPIIRNLPNKLIAVFIGL 143

Query: 165 VTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
             GF+S  LGV GG F   +++     +  KA  TS      I F   +           
Sbjct: 144 GAGFISAMLGVSGGFFLVPMLISLLRFAPKKAVGTSLASVIFIVFAGFISYSVQTP---- 199

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                   VN G  L+++  +++ +P+  K++    +K +      +     F
Sbjct: 200 --------VNFGLGLLLIIGTLIGSPVGAKMTAFYSEKAMRTLLGSLYIVIIF 244


>gi|325291889|ref|YP_004277753.1| hypothetical protein AGROH133_03791 [Agrobacterium sp. H13-3]
 gi|325059742|gb|ADY63433.1| hypothetical protein AGROH133_03791 [Agrobacterium sp. H13-3]
          Length = 308

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/286 (17%), Positives = 97/286 (33%), Gaps = 56/286 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + V+L    +   I +I+      G LSG+FGVGGG ++ P+L           +I   V
Sbjct: 1   MTVYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPVV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    +  +SV   + H R GT+++K+    +    +   V   + S +        
Sbjct: 53  AVATGANQVVASSVSGSITHFRRGTLDVKLGSVLLVGGLVGATVGVWIFSFLRSIGQLDL 112

Query: 125 FLNKAFAIFCLLMGILMLK-------------------------------RDRLYCERKF 153
            ++  + I    +G LMLK                               + R    + +
Sbjct: 113 IVSLLYVILLGTVGTLMLKESISALRRAARNETVTLRRPGHHNWVHRLPLKMRFKKSKIY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G   G L+  +GVGGG      M++           TS      +     +
Sbjct: 173 LSIIPVVTLGFGIGILTSIMGVGGGFIMVPAMIYLLRIPTNVVVGTSLFQIIFVTAYTTI 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           V+  + +            V++    I++   ++      ++   +
Sbjct: 233 VQAATNYS-----------VDVVLAFILMVAGVIGAQYGVRVGQKL 267



 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 51/124 (41%), Gaps = 8/124 (6%)

Query: 2   YDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI 61
           ++ ++   L +   K  +   I  ++   F  G L+ + GVGGG +MVP +    +    
Sbjct: 154 HNWVHRLPLKMRFKKSKIYLSIIPVVTLGFGIGILTSIMGVGGGFIMVPAMIYLLR---- 209

Query: 62  DDSICMHVAMGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
              I  +V +GTSL  I   T+  + ++   + ++++ +    +    I       +   
Sbjct: 210 ---IPTNVVVGTSLFQIIFVTAYTTIVQAATNYSVDVVLAFILMVAGVIGAQYGVRVGQK 266

Query: 121 VDKS 124
           +   
Sbjct: 267 LRGE 270


>gi|284036615|ref|YP_003386545.1| hypothetical protein Slin_1700 [Spirosoma linguale DSM 74]
 gi|283815908|gb|ADB37746.1| protein of unknown function DUF81 [Spirosoma linguale DSM 74]
          Length = 355

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 103/261 (39%), Gaps = 26/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I+A F++  + G  G+  G+      +     +GI        A  +       TS
Sbjct: 109 IFYFIMAGFVAQMIDGALGMAYGVTA----TTFLTSVGISPLF----ATASVHSSEIFTS 160

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH-----VDKSFLNKAFAIFCLLM 137
            +S   H + G +N ++ K  +    I   + + +I+      +   +L+ A +++  ++
Sbjct: 161 GVSGYMHLKFGNVNSRLFKIVLIPGVIGAALGAFLITKLADMEIVAQYLSPAISVYTAIL 220

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           GIL+LK+      +K P   +  +     GF+    G G G   N  ++  G        
Sbjct: 221 GILILKKALAKQTKKKPVRQIGLLAWFG-GFVDAIGGGGWGPIVNSTLIASGRHPRYTIG 279

Query: 198 TSAGVSALIAFPALLVR-IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           +       ++F + +V  +Y+G    G+            +L ++   ++  P+A +L+ 
Sbjct: 280 SVNLAEFFVSFASSVVFALYAGLDNYGMV-----------ILGLILGGMIAAPIAARLAQ 328

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            +  K + I   +++   S  
Sbjct: 329 KLPVKTMMILVGIVVILVSLR 349


>gi|197249005|ref|YP_002147341.1| hypothetical protein SeAg_B2522 [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197212708|gb|ACH50105.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
          Length = 269

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLVVLFFVAVLAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S +   R   +N+   K  I +  I ++  +L++ HV    L +   I  + +G+  
Sbjct: 65  SLSSSLYFIRRKVVNLAEQKLNILMTFIGSMSGALLVQHVQADILRQILPILVIFIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G   G F  L  +   G ++ K+TA
Sbjct: 125 LLMPKLGEEDRQRRLYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGYNLAKSTA 184

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++A      LL+ I  G  +     W+ GFV       +L    L   + ++L
Sbjct: 185 HAKVLNATSNVGGLLLFIIGGKVI-----WATGFV-------MLVGQFLGARMGSRL 229


>gi|212704325|ref|ZP_03312453.1| hypothetical protein DESPIG_02380 [Desulfovibrio piger ATCC 29098]
 gi|212672287|gb|EEB32770.1| hypothetical protein DESPIG_02380 [Desulfovibrio piger ATCC 29098]
          Length = 246

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 83/235 (35%), Gaps = 22/235 (9%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           GL GVGG  ++VP +            +  H AMGT+L     T  +    + ++G    
Sbjct: 16  GLAGVGG--ILVPPVLILM------SGLEPHTAMGTALASFIGTGFVGTWLYHKNGHYRF 67

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL--YCERKFPD 155
                +     +     +L+ + +D   L    A+  +  G   L+  +        +  
Sbjct: 68  MEAVPFALGSFVCAAPGALVNARIDAGPLVMILAVIIVFAGACTLRPPKPGRKGSPFWLG 127

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
              + + G  TGF++G  G GG + +   M+  G S   A A S       +F   +  +
Sbjct: 128 WKGRAVIGGATGFMAGLTGAGGPVASIPWMVLVGYSPIHAVALSMPYQIATSFSGSVGNM 187

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
             G        W L    + A+  +  + +L       ++  +   +L      +
Sbjct: 188 MGG-----HVDWML----LPALCAVQVVGLLG---GIAMAQRVSAPFLRKVIGAL 230



 Score = 43.9 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 8/119 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V    +G ++GL G GG +  +P +                 A+  S+     TS    
Sbjct: 132 AVIGGATGFMAGLTGAGGPVASIPWMVLV--------GYSPIHAVALSMPYQIATSFSGS 183

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           + +   G ++  +L     V  +  +    M   V   FL K     C+ +G  +  R 
Sbjct: 184 VGNMMGGHVDWMLLPALCAVQVVGLLGGIAMAQRVSAPFLRKVIGALCIGLGAFLFLRQ 242


>gi|256158287|ref|ZP_05456196.1| hypothetical protein BcetM4_05535 [Brucella ceti M490/95/1]
 gi|256252772|ref|ZP_05458308.1| hypothetical protein BcetB_00335 [Brucella ceti B1/94]
 gi|261219851|ref|ZP_05934132.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|265996807|ref|ZP_06109364.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|260918435|gb|EEX85088.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|262551104|gb|EEZ07265.1| conserved hypothetical protein [Brucella ceti M490/95/1]
          Length = 289

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/285 (17%), Positives = 94/285 (32%), Gaps = 49/285 (17%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + VA+F +  L G+ G+  G+ +VP+L+  F        I +HVA+  SL  +   S 
Sbjct: 13  LWLFVAAFGASMLGGMLGMASGIFIVPLLTSIF-------GIDIHVAIAASLISVIACSC 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S     +    N+++         +       +I  +  ++L   FAI  +L    ML 
Sbjct: 66  GSAAPLLKERLTNIRLAVVLETATTLGAFTGVFLIGVIPTAYLYLMFAIILVLSAWQMLV 125

Query: 144 RDRLYCERKFP--------------------DNYVKYIWGMV---------TGFLSGALG 174
           R     +   P                      +  Y  G +          G +S  LG
Sbjct: 126 RRHEMPQTNRPASRTWATLLRLHSAVPDRSSGKFTSYQVGSLPLGLSLMYGAGLVSALLG 185

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G+     M       I  ++ATS  +  +    +                +  G +N
Sbjct: 186 IGSGVLKIPAMDTALRLPIKVSSATSNFMIGVTGAASAGAY------------FMRGDIN 233

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 +   S+L      ++   I    L I F +++   +   
Sbjct: 234 TAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAIAM 278



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + L +   + +G +S L G+G G++ +P +  A +L        + V+  TS  +I 
Sbjct: 164 VGSLPLGLSLMYGAGLVSALLGIGSGVLKIPAMDTALRL-------PIKVSSATSNFMIG 216

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T   S   +   G IN  I         +  V  + +++ +    L   F I  +L+ I
Sbjct: 217 VTGAASAGAYFMRGDINTAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAI 276

Query: 140 LM 141
            M
Sbjct: 277 AM 278


>gi|295098040|emb|CBK87130.1| Predicted permeases [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 269

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  L G GGGL+ VP L       G+  +     A+ T+       
Sbjct: 14  LLAVLFFVAMLAGFIDALAG-GGGLLTVPALL----AAGMSPAQ----ALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S +   R   +N+   K  I +  I +   +L++ HV    L +   +  + +G+  
Sbjct: 65  SLSSSLYFIRRKVVNLADQKLNILMTFIGSTAGALLVQHVQSDILRQILPLLVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G G G F  L  +   G ++ K+TA
Sbjct: 125 LLMPKLGEEDRQRRLHGLPFALIAGGCVGFYDGFFGPGAGSFYALAFVTLAGFNLAKSTA 184

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++A      LL+ I  G  +     W+ GFV       ++    L     ++L
Sbjct: 185 HAKVLNATSNVGGLLLFIIGGKVI-----WATGFV-------MMAGQFLGARAGSRL 229


>gi|91217130|ref|ZP_01254092.1| hypothetical protein P700755_04018 [Psychroflexus torquis ATCC
           700755]
 gi|91184730|gb|EAS71111.1| hypothetical protein P700755_04018 [Psychroflexus torquis ATCC
           700755]
          Length = 269

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 7/121 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LII+   + G L+G+ G GGG +++P L    +L        M  A+ TSL +IA  S++
Sbjct: 153 LIIIEGVVVGALTGIVGAGGGFLIIPALVLLAKL-------PMKKAVATSLLIIAVKSLI 205

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            F+   ++  I+   L  +  +      +   +   +D   L K F  F  LMG+ ++ +
Sbjct: 206 GFLGDVQNIEIDWSFLGLFTGLSVAGIFIGIWLNKFIDGKKLKKGFGWFVFLMGVYIVYK 265

Query: 145 D 145
           +
Sbjct: 266 E 266



 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 89/252 (35%), Gaps = 40/252 (15%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VPVL        +        A   SL V+   S++  + + + G +++K    +   
Sbjct: 29  LTVPVLVYLLAEDPV-------TATAYSLFVVGTASLVGAVRNMQKGLVDIKTAVVFAIP 81

Query: 107 LPITTVVT-SLMISHVDKSFLNK-------------AFAIFCLLMGILMLKRDRLYCE-- 150
             IT  +T    +  +  S  +               FA+  LL    M+K      +  
Sbjct: 82  AFITVYLTRMYAVPAIPDSLFSVGGFEVTKNIGIMLFFALIMLLASYSMIKDKNKELKEV 141

Query: 151 ----RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSAL 205
               +   +  +  I G+V G L+G +G GGG      ++      + KA ATS     +
Sbjct: 142 EGKGKVKFNYPLIIIEGVVVGALTGIVGAGGGFLIIPALVLLAKLPMKKAVATSL---LI 198

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           IA  +L+  +  G   N    WS     +G    +    I    +   L+  I  K L  
Sbjct: 199 IAVKSLIGFL--GDVQNIEIDWSF----LGLFTGLSVAGIF---IGIWLNKFIDGKKLKK 249

Query: 266 GFSMIMFTTSFV 277
           GF   +F     
Sbjct: 250 GFGWFVFLMGVY 261


>gi|190890252|ref|YP_001976794.1| permease [Rhizobium etli CIAT 652]
 gi|190695531|gb|ACE89616.1| putative permease protein [Rhizobium etli CIAT 652]
          Length = 307

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 52/292 (17%), Positives = 99/292 (33%), Gaps = 56/292 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   I +I+      G LSG+FGVGGG ++ P+L           +I   V
Sbjct: 1   MTIYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPVV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    +  +S+   + H R GT+++K+    +        V   + S +        
Sbjct: 53  AVATGANQVVASSISGAITHFRRGTLDVKLGTVLLVGGLSGATVGIWIFSLLRALGQLDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
           F++  + IF   +G LML                                + R    + F
Sbjct: 113 FISLLYVIFLGTVGGLMLLESINAMRRAARNEPPAPRKPGHQHWVHKLPLKVRFKKSKIF 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G   G L+  +GVGGG      M++           TS      +     +
Sbjct: 173 LSVIPIVALGFAIGILTSVMGVGGGFIMVPAMIYLLRIPTNVVVGTSLYQIIFVTAYTTI 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           V+  + +            V+I    I++   ++      ++   +  + L 
Sbjct: 233 VQAATNFS-----------VDIVLAFILMVAGVIGAQYGVRVGQKLRGEQLR 273



 Score = 42.4 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 8/124 (6%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           ++   L V   K  +   +  I+   F  G L+ + GVGGG +MVP +    +       
Sbjct: 157 VHKLPLKVRFKKSKIFLSVIPIVALGFAIGILTSVMGVGGGFIMVPAMIYLLR------- 209

Query: 65  ICMHVAMGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           I  +V +GTSL  I   T+  + ++   + ++++ +    +    I       +   +  
Sbjct: 210 IPTNVVVGTSLYQIIFVTAYTTIVQAATNFSVDIVLAFILMVAGVIGAQYGVRVGQKLRG 269

Query: 124 SFLN 127
             L 
Sbjct: 270 EQLR 273


>gi|295103743|emb|CBL01287.1| Predicted permeases [Faecalibacterium prausnitzii SL3/3]
          Length = 258

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 90/255 (35%), Gaps = 25/255 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  + +   A   +G  +G  G+    V+ P+L     +          +A+G +L   
Sbjct: 3   LLFTVLVTFFAGMGAGLGTGFAGMSAAAVISPMLITFLHMDPY-------MAVGIALSSD 55

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              S +S   + ++  +++K     +  +   TVV S + S +  + +         L+G
Sbjct: 56  VLASAVSAYTYHKNKNLDIKNGLIMMASVLAFTVVGSWVASKMPSATMGGFSVFMTFLLG 115

Query: 139 ILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
           +  + R  +  +        +       + G++ GF+ G +G GGG+   L++    G  
Sbjct: 116 VKFILRPVMTTKEAMQGVSAQKRAVQSVVCGVLIGFICGFIGAGGGMMMLLILTSVLGYE 175

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           +  A  TS  +    A    +     G   +                + +  ++L   +A
Sbjct: 176 LKTAVGTSVFIMTFTALTGAVSHFMIGGTPD-----------WLVWGLCVVFTLLWARIA 224

Query: 252 TKLSYMIGKKYLTIG 266
              +     K L   
Sbjct: 225 AVFANKATPKTLNRA 239


>gi|300770023|ref|ZP_07079902.1| conserved hypothetical transmembrane protein [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300762499|gb|EFK59316.1| conserved hypothetical transmembrane protein [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 265

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/271 (18%), Positives = 98/271 (36%), Gaps = 34/271 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  + + L G   GL G GG ++ VP+L     +  I       +A   SL ++  TS+
Sbjct: 3   LLAYLLAVLIGISLGLIGSGGSILTVPILVYILDIDPI-------LATAYSLFIVGMTSL 55

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVT-SLMISHVD-------------KSFLNKA 129
              +       ++ K++  +     I  + T   ++ H+                F+   
Sbjct: 56  AGGISQTISKQVDYKMVLLFGIPSIIMVLFTRGYIMPHIPQEIGRVGDFVLTKGMFVMVL 115

Query: 130 FAIFCLLMGILMLKRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
           FA+  L   + M++        E++  DN    + G   G ++G +G GGG      ++ 
Sbjct: 116 FAVIMLFASVSMIRSKEKTFVAEKQRYDNKSIILKGAFLGVITGMVGAGGGFLIIPTLVL 175

Query: 188 Y-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           + G  + KA  TS  + A  +    +  +                V+   + +    +I+
Sbjct: 176 FAGMQMKKAIGTSLMIIAFNSLIGFIGFVEIDGHE----------VDWRLLFLFSIAAIM 225

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              + T LS  I    L I F   +     +
Sbjct: 226 GILIGTLLSRKISGSNLKISFGWFVLIMGIM 256



 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 9/122 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II+     G ++G+ G GGG +++P L     +        M  A+GTSL +IA  S++ 
Sbjct: 147 IILKGAFLGVITGMVGAGGGFLIIPTLVLFAGMQ-------MKKAIGTSLMIIAFNSLIG 199

Query: 86  FMEHRRHG--TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           F+         ++ ++L  +     +  ++ +L+   +  S L  +F  F L+MGI++L 
Sbjct: 200 FIGFVEIDGHEVDWRLLFLFSIAAIMGILIGTLLSRKISGSNLKISFGWFVLIMGIMILV 259

Query: 144 RD 145
           R+
Sbjct: 260 RE 261


>gi|99078076|ref|YP_611334.1| hypothetical protein TM1040_3098 [Ruegeria sp. TM1040]
 gi|99035214|gb|ABF62072.1| protein of unknown function DUF81 [Ruegeria sp. TM1040]
          Length = 330

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/288 (17%), Positives = 100/288 (34%), Gaps = 53/288 (18%)

Query: 9   SLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMH 68
            + ++L    V     LI+    + G LSG+FGVGGG ++ P+L       GI  +    
Sbjct: 25  DMNIYLPIAEVAVNAFLILGLGGMVGVLSGMFGVGGGFLLTPLLFFI----GIPPA---- 76

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK----- 123
           VA+ T    I  +SV   + H R  T+++K+         I   +   + +++       
Sbjct: 77  VAVATGANQIVASSVSGVLAHLRRRTVDLKMGAVLQLGGLIGAGLGVAIFNYLKSLGQID 136

Query: 124 SFLNKAFAIFCLLMGILML----------------------------KRDRLYCERKFPD 155
            F+   + +F  ++G LM                              + R      +  
Sbjct: 137 LFVTLCYVVFLGIVGGLMFIESVNALRKSKRGGAPKRRQRGWVHSLPFKMRFRTSGLYIS 196

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVR 214
                  G+  G L+  +GVGGG      M++  G        TS      +     ++ 
Sbjct: 197 VLPPVAVGLFVGMLTAIMGVGGGFIMVPAMIYLLGMPTKVVVGTSLFQIITVTAATTMMH 256

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
             +              V+I   +++L   ++     T++  ++  + 
Sbjct: 257 AVTNQT-----------VDIVLAVLLLIGGVVGAQFGTRIGMLLKAEQ 293


>gi|297530162|ref|YP_003671437.1| hypothetical protein GC56T3_1871 [Geobacillus sp. C56-T3]
 gi|319766694|ref|YP_004132195.1| hypothetical protein GYMC52_1609 [Geobacillus sp. Y412MC52]
 gi|297253414|gb|ADI26860.1| protein of unknown function DUF81 [Geobacillus sp. C56-T3]
 gi|317111560|gb|ADU94052.1| protein of unknown function DUF81 [Geobacillus sp. Y412MC52]
          Length = 295

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 93/263 (35%), Gaps = 26/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +   F++  + G  G+  G V    L   F +     S  +H+A          T+
Sbjct: 4   LIVFVFVGFIAQLIDGSLGMAYG-VTSSTLLLTFGIAPAVASASVHLAE-------VVTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H + G ++ ++    I    +   V +  +S++    +    ++F L +G  ++
Sbjct: 56  AASGASHWKFGNVDRRMAFRLIIPGSVGAFVGACFLSNLPGDLIKPYVSLFLLALGFYII 115

Query: 143 KRDRLYCERKFPDNYVKYI------WGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKA 195
            R  +   R       ++        G+V GFL    G G G     ++L        K 
Sbjct: 116 YRFLVLNGRAPSTPGKQWSNKQLVPLGLVAGFLDATGGGGWGPIATPVLLANKSMEARKV 175

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             T       +A  A L  + S GW            VN   VL ++   I+  P+A  L
Sbjct: 176 VGTVDTSEFAVALSATLGFVISLGWEQ----------VNWYWVLTLMAGGIVAAPIAAWL 225

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +    L +    ++  T+  
Sbjct: 226 VRKLPSHLLGVLVGGLIILTNVR 248



 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 47/138 (34%), Gaps = 4/138 (2%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++    ++G L    G G G +  PVL     +    ++  +   + TS   +A ++ + 
Sbjct: 138 LVPLGLVAGFLDATGGGGWGPIATPVLLANKSM----EARKVVGTVDTSEFAVALSATLG 193

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           F+       +N   +   +    +   + + ++  +    L        +L  +  L   
Sbjct: 194 FVISLGWEQVNWYWVLTLMAGGIVAAPIAAWLVRKLPSHLLGVLVGGLIILTNVRTLLHA 253

Query: 146 RLYCERKFPDNYVKYIWG 163
                  +P  Y   + G
Sbjct: 254 WEAPAPVYPTVYGLIVIG 271


>gi|292670468|ref|ZP_06603894.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
 gi|292647878|gb|EFF65850.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
          Length = 252

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 95/253 (37%), Gaps = 32/253 (12%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ ++  L G + G  G GG  V++ +L   F        + +H A+  +LG +A T++ 
Sbjct: 1   MLFLSMLLMGGIIGFVGAGGSGVIITLLVVGF-------GVPIHQALAVALGSMAFTTLS 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + H R   +             I  ++ +++ +H++   L+       L   +L+  R
Sbjct: 54  GAVSHYREHEVVPLTGAVLGMGGLIGALIGAVISNHMEAPHLSLFTGFMLLSSAVLLYLR 113

Query: 145 --------DRLYCERKFPDNYVKYIWGMVTGFL----SGALGVGGGI-FTNLLMLFYGAS 191
                    ++    +       Y+ G+  GF+    SGA G+G        LM+ +G  
Sbjct: 114 IYRAEWLGRQIPVREELLTGRRLYLCGLPIGFICGVLSGAFGIGSAAYIQIALMVVFGVP 173

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           + +A  T+  +   I+    +  I  G     L   +L        + +   S       
Sbjct: 174 LLQAIGTTMMIIVPISVSGGIGYILYGQLELQLFIQTL--------VGLSVGSYF----G 221

Query: 252 TKLSYMIGKKYLT 264
            KL+++     L 
Sbjct: 222 AKLTHLAPLPVLR 234



 Score = 38.5 bits (89), Expect = 1.00,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 7/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +   F+ G LSG FG+G    +   L   F        + +  A+GT++ +I P SV   
Sbjct: 141 LPIGFICGVLSGAFGIGSAAYIQIALMVVF-------GVPLLQAIGTTMMIIVPISVSGG 193

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + +  +G + +++    +  L + +   + +        L         + G +M+ 
Sbjct: 194 IGYILYGQLELQLFIQTLVGLSVGSYFGAKLTHLAPLPVLRFWIVALPAIGGTIMVL 250


>gi|254699299|ref|ZP_05161127.1| hypothetical protein Bsuib55_00347 [Brucella suis bv. 5 str. 513]
 gi|261749742|ref|ZP_05993451.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261739495|gb|EEY27421.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
          Length = 289

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 92/285 (32%), Gaps = 49/285 (17%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + VA+F +  L G+ G+  G+ +VP+L   F        I +HVA+  SL  +   S 
Sbjct: 13  LWLFVAAFGASMLGGMLGMASGIFIVPLLISIF-------GIDIHVAIAASLISVIACSC 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S     +    N+++         +       +I  +  ++L   FAI  +L    ML 
Sbjct: 66  GSAAPLLKERLTNIRLAVVLETATTLGAFTGVFLIGVIPTAYLYLMFAIILVLSAWQMLV 125

Query: 144 RDRLYCERKFPDN-----------------------------YVKYIWGMVTGFLSGALG 174
           R R   +   P +                              +        G +S  LG
Sbjct: 126 RRREMPQTNRPASRTWATLLRLHSAVPDRSSGKFTSYQVGSLPLGLSLMYGAGLVSALLG 185

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G+     M       I  ++ATS  +  +    +                +  G +N
Sbjct: 186 IGSGVLKIPAMDTALRLPIKVSSATSNFMIGVTGAASAGAY------------FMRGDIN 233

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 +   S+L      ++   I    L I F +++   +   
Sbjct: 234 TAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAIAM 278



 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + L +   + +G +S L G+G G++ +P +  A +L        + V+  TS  +I 
Sbjct: 164 VGSLPLGLSLMYGAGLVSALLGIGSGVLKIPAMDTALRL-------PIKVSSATSNFMIG 216

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T   S   +   G IN  I         +  V  + +++ +    L   F I  +L+ I
Sbjct: 217 VTGAASAGAYFMRGDINTAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAI 276

Query: 140 LM 141
            M
Sbjct: 277 AM 278


>gi|298208928|ref|YP_003717107.1| hypothetical protein CA2559_11828 [Croceibacter atlanticus
           HTCC2559]
 gi|83848855|gb|EAP86724.1| membrane protein, putative [Croceibacter atlanticus HTCC2559]
          Length = 266

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 7/121 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LII    + G ++G+ G GGG +++P L            + M  A+ TSL +IA  S++
Sbjct: 150 LIIAEGIIVGAITGIVGAGGGFLIIPALVLL-------AKLPMKKAVATSLFIIAIKSLI 202

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            F+   ++  I+   L  +  +  I   +   +   +D   L KAF  F L+MGI ++ +
Sbjct: 203 GFLGDVQNLDIDWPFLLIFTGLSIIGIFIGIWLNKFIDGKKLKKAFGWFVLIMGIYIIYK 262

Query: 145 D 145
           +
Sbjct: 263 E 263



 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 92/249 (36%), Gaps = 37/249 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP+L  A  L  +       +A   SL V+  TS++  +++   G ++ K    +   
Sbjct: 29  LTVPILVYALTLNPV-------IATAYSLFVVGTTSLVGAIKNITKGMVDFKTAIIFAIP 81

Query: 107 LPITTVVT-SLMISHVDKSFLNK-------------AFAIFCLLMGILMLKRDRLYCERK 152
             I   +T + +I  +                     FA   LL  + M++  R   + +
Sbjct: 82  AFIAVYITRAFLIPAIPDELFQIGNIMVTKNLAIMLFFAFIMLLASVSMIRNKRKETDEE 141

Query: 153 FP---DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAF 208
                +  +    G++ G ++G +G GGG      ++      + KA ATS     +IA 
Sbjct: 142 AEITYNYPLIIAEGIIVGAITGIVGAGGGFLIIPALVLLAKLPMKKAVATSL---FIIAI 198

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            +L+  +     L+         ++   +LI   +SI+   +   L+  I  K L   F 
Sbjct: 199 KSLIGFLGDVQNLD---------IDWPFLLIFTGLSIIGIFIGIWLNKFIDGKKLKKAFG 249

Query: 269 MIMFTTSFV 277
             +      
Sbjct: 250 WFVLIMGIY 258


>gi|320450787|ref|YP_004202883.1| hypothetical protein TSC_c17200 [Thermus scotoductus SA-01]
 gi|320150956|gb|ADW22334.1| putative domain of unknown function [Thermus scotoductus SA-01]
          Length = 253

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 103/254 (40%), Gaps = 16/254 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L +V + L G   GL G GG ++ VPVL                 A+  SL ++   +++
Sbjct: 3   LALVGALLIGVSLGLLGSGGSILTVPVLVYLL-------GEPPKQAIAESLLIVGGIALL 55

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + +   G ++ + +  +       T + + +   V        FA+  LL    M + 
Sbjct: 56  GALPYALRGLVDWRNVLFFGLPGMAGTYLGAWLSRFVSGEVQLLTFALVMLLAAYFMARP 115

Query: 145 DRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGV 202
             L  + +      K +  G+  G L+G +GVGGG      ++   G  ++ A  TS  +
Sbjct: 116 SPLRAKGEGSRKPWKIVLDGLAVGALTGFVGVGGGFLIVPALVLLGGLPMHLAIGTSLFI 175

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
            AL +F      ++       LP   L  VN G  L+ + +  L + L  +L+  + ++ 
Sbjct: 176 IALKSFAGFYKYLHL------LPELGL-AVNYGVALLFVGVGTLGSFLGGRLAVRLPQEG 228

Query: 263 LTIGFSMIMFTTSF 276
           L  GF++ +     
Sbjct: 229 LRRGFALFLVAMGA 242



 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 12/125 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I++     G L+G  GVGGG ++VP L            + MH+A+GTSL +IA  S   
Sbjct: 131 IVLDGLAVGALTGFVGVGGGFLIVPALVLL-------GGLPMHLAIGTSLFIIALKSFAG 183

Query: 86  FMEHRRHG-----TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           F ++          +N  +   ++ V  + + +   +   + +  L + FA+F + MG  
Sbjct: 184 FYKYLHLLPELGLAVNYGVALLFVGVGTLGSFLGGRLAVRLPQEGLRRGFALFLVAMGAF 243

Query: 141 MLKRD 145
           ++ + 
Sbjct: 244 IVAQS 248


>gi|256426206|ref|YP_003126859.1| hypothetical protein Cpin_7258 [Chitinophaga pinensis DSM 2588]
 gi|256041114|gb|ACU64658.1| protein of unknown function DUF81 [Chitinophaga pinensis DSM 2588]
          Length = 263

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 92/264 (34%), Gaps = 29/264 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++++   + G LSGL G GG  V  P L       G++       A+ + L     +++
Sbjct: 11  LVVLIIGLIVGYLSGLLGKGGSAVSTPALQI---FAGVNPFY----ALASPLPAAITSTI 63

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG---IL 140
            +   + R    N K++          T+  S +   +    L    A+F + +G   + 
Sbjct: 64  SATTVYSRQKLFNRKVILTGALFGVPATLAGSFLSKFLPGKTLMILTALFIVSIGGSLLF 123

Query: 141 MLKRDRLYCERKFPDNY-------VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
              R +   E    +N        +      +          GG +F++  +      I 
Sbjct: 124 SFLRKKNVEETPVVENAAEGHQQLIVLASLGIGLLSGLLANAGGVLFSSFFIKKLHMPIK 183

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +A A S  +SAL++ P  L              W LG ++    L++   +I  + L  K
Sbjct: 184 QALACSIVLSALLSIPGALA------------HWWLGHIDWNIALVLSLTAIPSSYLGAK 231

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
            +  +    L   F+  +      
Sbjct: 232 TAVKMKSPLLEKLFACTLIVFGVY 255


>gi|311747495|ref|ZP_07721280.1| membrane protein [Algoriphagus sp. PR1]
 gi|126574855|gb|EAZ79226.1| membrane protein [Algoriphagus sp. PR1]
          Length = 268

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 7/128 (5%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            VV    +I +   + G ++G+ G GGG +++P L    +L        M  A+GTSL +
Sbjct: 144 QVVFNYPMIALEGSVVGLVTGIVGAGGGFLIIPALVLLAKL-------PMKKAVGTSLLI 196

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           IA  S++ F+    + TI+ K+L  +  +  +   + S +   ++++ L K F  F L M
Sbjct: 197 IAAKSLIGFLGDVSNQTIDWKMLLIFTGLSIVGIFIGSALSKKINENALKKGFGWFVLAM 256

Query: 138 GILMLKRD 145
           G+ ++ ++
Sbjct: 257 GVYIISKE 264



 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 86/250 (34%), Gaps = 38/250 (15%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VPVL     +  +       +A   SL V+  TS++    + +   ++ K    +   
Sbjct: 29  LTVPVLVYILSVEPV-------LATAYSLFVVGSTSLLGSFTYMKKQLVDYKTALVFAIP 81

Query: 107 LPITTVVT-SLMISHVDKSFLN-------------KAFAIFCLLMGILMLKRDRLYCERK 152
             I   +T   ++  +     +               FA+  L     M+K  +   + +
Sbjct: 82  SFIAVFLTRKFLVPALPDPLFSLAGFEVAKNVGIMVFFALIMLAASYSMIKGRKNDLDEE 141

Query: 153 FP----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIA 207
                 +  +  + G V G ++G +G GGG      ++      + KA  TS  + A  +
Sbjct: 142 NSQVVFNYPMIALEGSVVGLVTGIVGAGGGFLIIPALVLLAKLPMKKAVGTSLLIIAAKS 201

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
               L  + +              ++   +LI   +SI+   + + LS  I +  L  GF
Sbjct: 202 LIGFLGDVSNQT------------IDWKMLLIFTGLSIVGIFIGSALSKKINENALKKGF 249

Query: 268 SMIMFTTSFV 277
              +      
Sbjct: 250 GWFVLAMGVY 259


>gi|167045656|gb|ABZ10304.1| putative domain of unknown function DUF81 [uncultured marine
           crenarchaeote HF4000_APKG10L15]
          Length = 251

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 66/174 (37%), Gaps = 12/174 (6%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL+     MG   +    +A+  SL  +   SV S   + R   I + +      +  
Sbjct: 30  VPVLTF----MGFSPT----LAVSNSLFAVFSNSVASTTMYARQKRIELSLGWKLGLMAV 81

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK---YIWGMV 165
             T++ + + S +        FA+  +     +  + ++  +       +          
Sbjct: 82  PGTILGAFVSSEISPDIFKILFALVLISSASYIFLKRKIEEKPIDTSRLLLVFSAGASFF 141

Query: 166 TGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            G +S   G+GGG+    LM +  G S+ +A  TS  +    +F  L++    G
Sbjct: 142 AGIISSLFGIGGGLIFVPLMVVALGISMKRAAPTSQFILMFASFSGLIMHSMLG 195



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 7/103 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +     ASF +G +S LFG+GGGL+ VP++  A         I M  A  TS  ++   
Sbjct: 131 LLVFSAGASFFAGIISSLFGIGGGLIFVPLMVVAL-------GISMKRAAPTSQFILMFA 183

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           S    + H   G  +               ++ + +   + ++
Sbjct: 184 SFSGLIMHSMLGHPDYYQALLLSIGAFAGGILGARLSLEIKEN 226


>gi|159037821|ref|YP_001537074.1| hypothetical protein Sare_2223 [Salinispora arenicola CNS-205]
 gi|157916656|gb|ABV98083.1| protein of unknown function DUF81 [Salinispora arenicola CNS-205]
          Length = 298

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 78/224 (34%), Gaps = 23/224 (10%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L            +    A+ TSL V+  TS +  + H R G I  +    +     
Sbjct: 31  VPLLVYV-------ADLPAKEAIATSLLVVGVTSAVGVLPHARAGRIRWRTGLLFGVAGM 83

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP---DNYVKYIWGMV 165
           +       +   V  + L   FA+  L     M++  R       P         + G+V
Sbjct: 84  VGAYAGGRLAVFVPAAVLLTGFAVMMLATAAAMIRGRRANGGGPAPPELPVLRVLVDGVV 143

Query: 166 TGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            G ++G +G GGG     ++    G  +  A  TS  V A+ +F  L   + +       
Sbjct: 144 VGLVTGLVGAGGGFLVVPVLALLGGLPMPVAVGTSLVVIAMKSFAGLAGYLSNTS----- 198

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
                  ++     ++   ++  +    +L+  + +  L   F 
Sbjct: 199 -------IDWSLAAMVTAAAVAGSLAGARLAGRVPEVVLRRTFG 235



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 7/91 (7%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
            GGG ++VPVL+           + M VA+GTSL VIA  S      +  + +I+  +  
Sbjct: 153 AGGGFLVVPVLALL-------GGLPMPVAVGTSLVVIAMKSFAGLAGYLSNTSIDWSLAA 205

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                    ++  + +   V +  L + F  
Sbjct: 206 MVTAAAVAGSLAGARLAGRVPEVVLRRTFGW 236


>gi|330686468|gb|EGG98064.1| putative membrane protein [Staphylococcus epidermidis VCU121]
          Length = 299

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 24/259 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +A FL+  + G  G+G G       S      G+  +I       T       T+
Sbjct: 4   LFIFALAGFLAQLVDGSLGMGFGA----SSSSILLTFGVAPAIV----SATVHFSEIATT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H +   ++   +        I+  + + +++ ++ + +    A+F L MG+ +L
Sbjct: 56  AASGTSHWKFENVHYPTMLKLAIPGAISAFLGAAVLTSINANAIKPLIALFLLSMGVYIL 115

Query: 143 KR---DRLYCERKFPDNYVKYIW---GMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKA 195
            +     +  E  +   + +      G + GFL    G G G     L+L          
Sbjct: 116 YQFIFKHMNDEHHYSGQFGRIRMVTQGAIAGFLDAIGGGGWGPVNTPLLLSSKKMEPRYV 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T +     +   A L  I             +  +N  AV+ +    ++  P++  L 
Sbjct: 176 IGTVSASEFFVTLSASLSFIIF---------LGMTHINWLAVIALSAGGLIAAPISAYLV 226

Query: 256 YMIGKKYLTIGFSMIMFTT 274
            ++    L I    ++  T
Sbjct: 227 KILPINILAICVGGLIIFT 245


>gi|254506172|ref|ZP_05118316.1| transporter [Vibrio parahaemolyticus 16]
 gi|219550990|gb|EED27971.1| transporter [Vibrio parahaemolyticus 16]
          Length = 259

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 96/264 (36%), Gaps = 28/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++ + +F +G +  + G GGG++ VP L            +  H+A+GT+       S
Sbjct: 9   LLVLALVAFAAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATFAS 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-M 141
             +   + R      +  K       I   + +L +  +   +L K   +  L   +  +
Sbjct: 60  STAAFTYYRKRLFKPRCWKRAFVSTLIGATLGTLFVDLISTEWLEKILPLIILAAAVYTI 119

Query: 142 LKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
             +     + + P+     N  +Y  G++ GF  G  G G G F T   M  Y  +I  A
Sbjct: 120 WHKTPNAVKNEMPEPCPVLNKKQYGQGLILGFYDGVAGPGTGAFWTVSSMALYKLNILLA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  S  ++    F +L+                LG ++    L +    +    +    +
Sbjct: 180 SGLSKAMNFTSNFTSLVTFAI------------LGHIDWVLGLTMGLCLMAGAFVGAHSA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 IRFGAKFIRPVFVTVVSILAVKLA 251


>gi|229085791|ref|ZP_04218019.1| hypothetical protein bcere0022_23970 [Bacillus cereus Rock3-44]
 gi|228697590|gb|EEL50347.1| hypothetical protein bcere0022_23970 [Bacillus cereus Rock3-44]
          Length = 306

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 94/269 (34%), Gaps = 23/269 (8%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           ++    +  + +  +  F +  + G  G+  G V    L   F +     S  +H+A   
Sbjct: 2   ITGGFYMQKLIVFAIIGFFAQLIDGALGMAYG-VTSSSLLLMFGIAPAVASASVHLAE-- 58

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
                  T+  S + H R G ++   +        I   V +  +S++    +    ++F
Sbjct: 59  -----VVTTAASGVSHIRFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDLIKPYISLF 113

Query: 134 CLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
              +G+ +L R     ++    K   +      G+  GF+    G G G  T  ++L  G
Sbjct: 114 LFTLGVYILLRFIIQKQIVKSNKRMSSKQLIPLGLFAGFVDSTGGGGWGPITTPVLLARG 173

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
               K   +       ++  A +    S GW            V+   V  ++   IL  
Sbjct: 174 NEARKVIGSVDTSEFPVSLAATIGFFISLGWEQ----------VSWVWVFALMLGGILAA 223

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           PLA  L  ++    L +    ++  T+  
Sbjct: 224 PLAAWLVRIVPSHLLGVLVGGLIIFTNIR 252


>gi|209547817|ref|YP_002279734.1| hypothetical protein Rleg2_0208 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533573|gb|ACI53508.1| protein of unknown function DUF81 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 307

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 98/292 (33%), Gaps = 56/292 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   I +I+      G LSG+FGVGGG ++ P+L           +I   V
Sbjct: 1   MTIYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPVV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    +  +S+   + H R GT+++K+    +        V   + S +        
Sbjct: 53  AVATGANQVVASSISGAITHFRRGTLDVKLGTVLLVGGLTGATVGIWIFSLLRAIGQLDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            ++  + IF   +G LML                                + R    + F
Sbjct: 113 IISLMYVIFLGTVGGLMLLESINAMRRAARNEPPAPRKPGHQHWVHRLPLKVRFKKSKIF 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G   G L+  +GVGGG      M++           TS      +     +
Sbjct: 173 LSVIPIVALGFAIGILTSIMGVGGGFIMVPAMIYLLRIPTNVVVGTSLFQIIFVTAYTTI 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           V+  + +            V+I    I++   ++      ++   +  + L 
Sbjct: 233 VQAATNFS-----------VDIVLAFILMVAGVIGAQYGVRVGQKLRGEQLR 273



 Score = 43.5 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 8/124 (6%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           ++   L V   K  +   +  I+   F  G L+ + GVGGG +MVP +    +       
Sbjct: 157 VHRLPLKVRFKKSKIFLSVIPIVALGFAIGILTSIMGVGGGFIMVPAMIYLLR------- 209

Query: 65  ICMHVAMGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           I  +V +GTSL  I   T+  + ++   + ++++ +    +    I       +   +  
Sbjct: 210 IPTNVVVGTSLFQIIFVTAYTTIVQAATNFSVDIVLAFILMVAGVIGAQYGVRVGQKLRG 269

Query: 124 SFLN 127
             L 
Sbjct: 270 EQLR 273


>gi|150395375|ref|YP_001325842.1| hypothetical protein Smed_0148 [Sinorhizobium medicae WSM419]
 gi|150026890|gb|ABR59007.1| protein of unknown function DUF81 [Sinorhizobium medicae WSM419]
          Length = 308

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/286 (16%), Positives = 99/286 (34%), Gaps = 56/286 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + V+L    +   I +I+      G LSG+FGVGGG ++ P+L           +I   V
Sbjct: 1   MTVYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPVV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS----- 124
           A+ T    +  +S+   + H R GTI++K+    +    +   V   + S +  +     
Sbjct: 53  AVATGANQVVASSISGAIAHFRRGTIDIKLGTVLLCGGLVGATVGVWLFSLLRSAGQLDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            ++  + +    +G LML                                + R    + +
Sbjct: 113 VISLLYVLLLGSVGTLMLWESIGAMRKAAKNQAPQLRRPGQHNWIHGLPLKMRFKKSKIY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G   G L+  +GVGGG      M++           TS      ++   ++
Sbjct: 173 LSVIPVATLGFSIGVLTSVMGVGGGFIMVPAMIYLLRIPTNVVVGTSLFQIVFVSAYTVI 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           V+  + +            V+I    +++   ++      ++   +
Sbjct: 233 VQASTNYT-----------VDIVLAFVLMIAGVIGAQYGVRVGQRL 267



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 8/124 (6%)

Query: 2   YDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI 61
           ++ ++   L +   K  +   +  +    F  G L+ + GVGGG +MVP +    +    
Sbjct: 154 HNWIHGLPLKMRFKKSKIYLSVIPVATLGFSIGVLTSVMGVGGGFIMVPAMIYLLR---- 209

Query: 62  DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISH 120
              I  +V +GTSL  I   S  + +       T+++ +    +    I       +   
Sbjct: 210 ---IPTNVVVGTSLFQIVFVSAYTVIVQASTNYTVDIVLAFVLMIAGVIGAQYGVRVGQR 266

Query: 121 VDKS 124
           +   
Sbjct: 267 LRGE 270


>gi|322508331|gb|ADX03785.1| permease [Acinetobacter baumannii 1656-2]
          Length = 294

 Score = 71.3 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 93/278 (33%), Gaps = 44/278 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  L G   G+ GVGGG +M P+L   F+       I  H+A+GT L   A +    
Sbjct: 7   FILAGMLVGFCVGITGVGGGSLMTPILIGLFR-------IEPHIAIGTDLLYAAISKFCG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
            M H +   I   I+          +  T+ ++ H           L         L G+
Sbjct: 60  SMVHAKKLNIVWPIVLWLAVGSIPASFGTAWVLEHYLSQSTHYKAVLTMVLGFMLTLTGV 119

Query: 140 LMLKRDRLYCERK-----------------FPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++ R R+                              I G++ G       VG G F  
Sbjct: 120 SIIFRTRIEKFFNKFRNKENTQTENEQLAVQNKRTYIVIMGIILGVFVTLSSVGAGAFGI 179

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
           + ++       + +   +    + L+              + GL   S G V+   ++ +
Sbjct: 180 MALVIMFPNLPMIRIIGSDVVHAVLLTL------------VAGLGHMSAGNVDFMLLMWL 227

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L  SI    + T +S  + ++ +     + +F     F
Sbjct: 228 LVGSIPAIIIGTLISSRMPERLIRKILGITLFALGVNF 265



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 49/128 (38%), Gaps = 7/128 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I++   + G    L  VG G   +  L   F       ++ M   +G+ +      ++
Sbjct: 154 TYIVIMGIILGVFVTLSSVGAGAFGIMALVIMF------PNLPMIRIIGSDVVHAVLLTL 207

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-ML 142
           ++ + H   G ++  +L   +       ++ +L+ S + +  + K   I    +G+  M+
Sbjct: 208 VAGLGHMSAGNVDFMLLMWLLVGSIPAIIIGTLISSRMPERLIRKILGITLFALGVNFMV 267

Query: 143 KRDRLYCE 150
              +   +
Sbjct: 268 HPVKAKPK 275


>gi|197334287|ref|YP_002155812.1| hypothetical membrane spanning protein [Vibrio fischeri MJ11]
 gi|197315777|gb|ACH65224.1| hypothetical membrane spanning protein [Vibrio fischeri MJ11]
          Length = 256

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 103/276 (37%), Gaps = 32/276 (11%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M FL    ++    ++ + +F++G +  + G GGG++ VP L            +  H+A
Sbjct: 1   MEFLEPSTLI----ILGLVAFIAGFIDAVAG-GGGMLTVPALLSI--------GLPPHIA 47

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+    +  S  + + + +    +    K             +L+++++   +L K  
Sbjct: 48  LGTNKLAASFASSTAALTYFKKKLFDPHFWKTSFVATLFGATCGTLLVNYISTEWLEKGL 107

Query: 131 AIFCLLMGILMLKRDRLYC-ERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIF-TNL 183
            +  L   I  +   +    + + PD        + I G+  GF  G  G G G F T  
Sbjct: 108 PLIILAAAIYTIWHPQPKADQNQLPDITPKLKTQQIIQGLSLGFYDGVAGPGTGAFWTVS 167

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
            M  Y  +I  A+  +  ++    F +L+                LG +N    L +   
Sbjct: 168 SMAMYRLNILLASGLAKAMNFTSNFTSLVTFAI------------LGHINWALGLTMGVC 215

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            ++   +    +   G K++   F  ++   +   A
Sbjct: 216 LMVGAFIGAHSAIRFGSKFIRPVFVTVVCILAVKLA 251


>gi|116250358|ref|YP_766196.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255006|emb|CAK06080.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 307

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/292 (17%), Positives = 98/292 (33%), Gaps = 56/292 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   I +I+      G LSG+FGVGGG ++ P+L           +I   V
Sbjct: 1   MTIYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPVV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    +  +S+   + H R G++++K+    +        V   + S +        
Sbjct: 53  AVATGANQVVASSISGAITHFRRGSLDVKLGTVLLVGGLAGATVGIWIFSLLRAIGQLDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            ++  + IF   +G LML                                + R    + F
Sbjct: 113 IISLMYVIFLGTVGGLMLLESVNAMRRAARNEPPAPRKPGHQHWVHKLPLKVRFKKSKIF 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G   G L+  +GVGGG      M++           TS      +     +
Sbjct: 173 LSVIPIVALGFAIGILTSIMGVGGGFIMVPAMIYLLRIPTNVVVGTSLFQIIFVTAYTTI 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           V+  + +            V+I    I++   ++      ++   +  + L 
Sbjct: 233 VQAATNFS-----------VDIVLAFILMVAGVIGAQYGVRVGQKLRGEQLR 273



 Score = 43.1 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 8/124 (6%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           ++   L V   K  +   +  I+   F  G L+ + GVGGG +MVP +    +       
Sbjct: 157 VHKLPLKVRFKKSKIFLSVIPIVALGFAIGILTSIMGVGGGFIMVPAMIYLLR------- 209

Query: 65  ICMHVAMGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           I  +V +GTSL  I   T+  + ++   + ++++ +    +    I       +   +  
Sbjct: 210 IPTNVVVGTSLFQIIFVTAYTTIVQAATNFSVDIVLAFILMVAGVIGAQYGVRVGQKLRG 269

Query: 124 SFLN 127
             L 
Sbjct: 270 EQLR 273


>gi|309810493|ref|ZP_07704311.1| putative membrane protein [Dermacoccus sp. Ellin185]
 gi|308435490|gb|EFP59304.1| putative membrane protein [Dermacoccus sp. Ellin185]
          Length = 262

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 90/249 (36%), Gaps = 33/249 (13%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VPVL  A            H A  +SL ++  +S++    H R GT+       +  
Sbjct: 24  ILTVPVLVYAL-------DKSPHEATTSSLVIVGISSLVGLWSHHRAGTVQWGQGALFGL 76

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR---------LYCERKFPDN 156
           V      + +     VD + L   FA   +++  +M+ R R             R+    
Sbjct: 77  VGIGGAYLGTRASRGVDGNLLLTLFAALLVVVATVMIMRARRERDNTACVPRPLREENGG 136

Query: 157 YV-----KYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPA 210
           +        + G   G L+G  GVGGG      +    G  +  A  TS  V  + +  +
Sbjct: 137 HTFALVKVALAGTGVGLLTGFFGVGGGFAIVPALTLALGYCMPYAVGTSLLVVVINSATS 196

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           LL     G  L               V+     +++   L  +L+  I K+ L +GF++ 
Sbjct: 197 LLFHSADGADLE-----------WNVVVPFAATAVIGAALGGRLAQRIPKRMLQLGFAVF 245

Query: 271 MFTTSFVFA 279
           +   +   A
Sbjct: 246 LMCVAAYTA 254


>gi|327403119|ref|YP_004343957.1| hypothetical protein Fluta_1123 [Fluviicola taffensis DSM 16823]
 gi|327318627|gb|AEA43119.1| protein of unknown function DUF81 [Fluviicola taffensis DSM 16823]
          Length = 266

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 94/247 (38%), Gaps = 34/247 (13%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP+L   FQ+   D ++        SL ++  TS+   ++H +   IN+K    +  
Sbjct: 27  ILAVPILVLFFQMEPKDATVY-------SLFIVGVTSLFGAIQHFKSKLINLKNTLLFAI 79

Query: 106 VLPITTVV---------------TSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
              I+  +                  ++  ++  F+   F +  +L  I M+K  +    
Sbjct: 80  PAVISVSLTRLFVIPKLPPIIHVGDFIVFDLNT-FIMGLFGLLMILAAIPMIKGQKELPS 138

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFP 209
            K     +  I+G + GF+SG +G GGG      + +F    I  A ATS  + A+ +  
Sbjct: 139 AKKNRPTILVIFGAIIGFISGLVGAGGGFMIIPSLSIFMKVPIKNAIATSIVIIAINSLS 198

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
                ++               +N   +L    I++    +  +L+++I    L   F +
Sbjct: 199 GFTAELFRPNIQ----------LNWEILLGFTLIAVAGLMIGLRLNHLIQAAKLKKAFGV 248

Query: 270 IMFTTSF 276
            +     
Sbjct: 249 FVLIIGI 255



 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 9/121 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++++   + G +SGL G GGG +++P LS   +       + +  A+ TS+ +IA  S+
Sbjct: 145 TILVIFGAIIGFISGLVGAGGGFMIIPSLSIFMK-------VPIKNAIATSIVIIAINSL 197

Query: 84  MSFMEHRRHGTI--NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             F        I  N +IL  +  +     ++   +   +  + L KAF +F L++GI +
Sbjct: 198 SGFTAELFRPNIQLNWEILLGFTLIAVAGLMIGLRLNHLIQAAKLKKAFGVFVLIIGITI 257

Query: 142 L 142
           L
Sbjct: 258 L 258


>gi|146312517|ref|YP_001177591.1| hypothetical protein Ent638_2875 [Enterobacter sp. 638]
 gi|145319393|gb|ABP61540.1| protein of unknown function DUF81 [Enterobacter sp. 638]
          Length = 270

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  L G GGGL+ VP L       G+  +     A+ T+       
Sbjct: 14  LLAVLFFVAMLAGFIDALAG-GGGLLTVPALLAV----GMSPAQ----ALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +  I +   +L++ HV    L +   I  + +G+  
Sbjct: 65  SLSASIYFIRRKVVSLADQKLNILMTFIGSTSGALLVQHVQSDILRQILPILVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G G G F  L  +   G ++ K+TA
Sbjct: 125 LLMPKLGEEDRQRRLHGLPFALIAGGCVGFYDGFFGPGAGSFYALAFVTLAGFNLAKSTA 184

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++A      LL+ I  G  +     W+ GFV       ++    L   + ++L
Sbjct: 185 HAKVLNATSNLGGLLLFIIGGKVI-----WATGFV-------MMVGQFLGARVGSRL 229


>gi|188994402|ref|YP_001928654.1| hypothetical protein PGN_0538 [Porphyromonas gingivalis ATCC 33277]
 gi|188594082|dbj|BAG33057.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 268

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 7/124 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            LI++   + GTL+GL G GG  +++P L            + M  A+GTSL +I+  S+
Sbjct: 150 ALILLEGIVVGTLTGLVGAGGSFLIIPALVFL-------GGLPMKQAIGTSLVIISAKSL 202

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + F+       ++  +L        I   +   +  ++D   L  AF  F  +MG+ ++ 
Sbjct: 203 LGFLGENNPAGLDWGLLLSVTAFAIIGIFIGMKLSQYIDGDKLKPAFGWFVFVMGLYIIL 262

Query: 144 RDRL 147
           ++ +
Sbjct: 263 KETI 266



 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 93/253 (36%), Gaps = 41/253 (16%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VPVL      MGID      +    SL ++  TSV+  + + R   ++++    +   
Sbjct: 26  LTVPVLVYL---MGIDPV----LGTAYSLFIVGATSVVGSISYFRRSLVDVRTAVLFGLP 78

Query: 107 LPITTVVT-SLMISHVDKSFLN-------------KAFAIFCLLMGILMLKRDRLY---- 148
                 +T + ++  + +  L+               FA+  L   + M++  ++     
Sbjct: 79  SIFAVFLTRAYLVPAIPECVLSPGSFAIDRNMLLMLLFAVLMLTASVSMIRPAKMQEKAS 138

Query: 149 ---CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSA 204
               + K P   +  + G+V G L+G +G GG       ++F  G  + +A  TS  + +
Sbjct: 139 QRPPKPKQPRYALILLEGIVVGTLTGLVGAGGSFLIIPALVFLGGLPMKQAIGTSLVIIS 198

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
             +    L            P      ++ G +L +   +I+   +  KLS  I    L 
Sbjct: 199 AKSLLGFLG--------ENNPAG----LDWGLLLSVTAFAIIGIFIGMKLSQYIDGDKLK 246

Query: 265 IGFSMIMFTTSFV 277
             F   +F     
Sbjct: 247 PAFGWFVFVMGLY 259


>gi|291618239|ref|YP_003520981.1| YfcA [Pantoea ananatis LMG 20103]
 gi|291153269|gb|ADD77853.1| YfcA [Pantoea ananatis LMG 20103]
          Length = 267

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 92/237 (38%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + L+   + L+G +  + G GGGL+ VP L  A         +    A+ T+       
Sbjct: 10  LVALLFFIALLAGFIDSIAG-GGGLLTVPALLAA--------GLSPAQALATNKLQSVGG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + +   R G I +   +  I +  +  V  +++I H+   FL +   +  + +G+  
Sbjct: 61  SFSASLYFVRRGAIKLSEQRLNIAMTFLGAVGGAILIQHLQADFLRQVLPLLLIAIGMWF 120

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   R+  +    +        + G   GF  G  G G G F  L  +   G ++ KATA
Sbjct: 121 LLMPRIGEDDRVHRLQGLPFALVGGGCIGFYDGFFGPGAGSFYALGFVTLCGYNLAKATA 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++      +LL  ++ G             V  G  LI++  +     L  +L
Sbjct: 181 HAKLLNFTSNLGSLLFFMFGGK------------VVWGTGLIMMLGAFCGARLGARL 225


>gi|327394632|dbj|BAK12054.1| inner membrane protein YfcA [Pantoea ananatis AJ13355]
          Length = 267

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 92/237 (38%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + L+   + L+G +  + G GGGL+ VP L  A         +    A+ T+       
Sbjct: 10  LVALLFFIALLAGFIDSIAG-GGGLLTVPALLAA--------GLSPAQALATNKLQSVGG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + +   R G I +   +  I +  +  V  +++I H+   FL +   +  + +G+  
Sbjct: 61  SFSASLYFVRRGAIKLSEQRLNIAMTFLGAVGGAILIQHLQADFLRQVLPLLLIAIGMWF 120

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   R+  +    +        + G   GF  G  G G G F  L  +   G ++ KATA
Sbjct: 121 LLMPRIGEDDRVHRLQGLPFALVGGGCIGFYDGFFGPGAGSFYALGFVTLCGYNLAKATA 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++      +LL  ++ G             V  G  LI++  +     L  +L
Sbjct: 181 HAKLLNFTSNLGSLLFFMFGGK------------VVWGTGLIMMLGAFCGARLGARL 225


>gi|167043268|gb|ABZ07974.1| putative domain of unknown function DUF81 [uncultured marine
           crenarchaeote HF4000_ANIW141M12]
          Length = 251

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 66/174 (37%), Gaps = 12/174 (6%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL+ A    G   +    +A+  SL  +   SV S   + +   I + +      +  
Sbjct: 30  VPVLTFA----GFSPT----LAVSNSLFAVFSNSVASTTMYAKQKRIELSLGWKLGLMAV 81

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK---YIWGMV 165
             T++ + + S +        FA+  +     +  + ++  +       +          
Sbjct: 82  PGTILGAFVSSEISPDIFKILFALILISSASYIFLKRKIEEKPIDVSRLLLVFSAGASFF 141

Query: 166 TGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            G +S   G+GGG+    LM +  G S+ +A  TS  +    +F  L+V    G
Sbjct: 142 AGIISSLFGIGGGLIFVPLMVVALGISMKRAAPTSQFILMFASFSGLIVHSMLG 195



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 7/103 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +     ASF +G +S LFG+GGGL+ VP++  A         I M  A  TS  ++   
Sbjct: 131 LLVFSAGASFFAGIISSLFGIGGGLIFVPLMVVAL-------GISMKRAAPTSQFILMFA 183

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           S    + H   G  +               ++ + +   + ++
Sbjct: 184 SFSGLIVHSMLGHPDYYQALLLSIGAFAGGILGARLSLEIKEN 226


>gi|253689185|ref|YP_003018375.1| hypothetical protein PC1_2809 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251755763|gb|ACT13839.1| protein of unknown function DUF81 [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 266

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 92/238 (38%), Gaps = 25/238 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + ++     L+G +  + G GGGL+ +P L  A         +    A+ T+      
Sbjct: 9   EMLAVLFFVGALAGFIDSIAG-GGGLLTIPALLAA--------GLSPAQALATNKLQAVG 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R   +N+   K  I +  I +   + +I  +   FL +   +  + +G+ 
Sbjct: 60  GSFSASLYFIRRRAVNLGEQKLAIALTFIGSTFGAWLIQQIHADFLRQLLPVLIIGIGLY 119

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L   ++     +R+        + G   GF  G  G G G F  L  +  YG ++ KAT
Sbjct: 120 FLLTPKIGDDDRQRRLSPLPFAIVAGGCVGFYDGFFGPGAGSFYALAFVTLYGFNLAKAT 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A +  ++    F  LL  + SG  +  +              ++L   IL   L  K+
Sbjct: 180 ANAKILNFTSNFGGLLFFMLSGKVVWVV------------GGVMLIGQILGARLGAKM 225


>gi|261404614|ref|YP_003240855.1| hypothetical protein GYMC10_0748 [Paenibacillus sp. Y412MC10]
 gi|261281077|gb|ACX63048.1| protein of unknown function DUF81 [Paenibacillus sp. Y412MC10]
          Length = 255

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 82/227 (36%), Gaps = 26/227 (11%)

Query: 54  KAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV 113
               ++ +     +H A+GT+L  +  +S+   + H R G + ++              V
Sbjct: 27  FIISILTVVFGYPIHTALGTALAAMFFSSLSGSVSHYREGNMVLRTGAVVGLAGAAGAWV 86

Query: 114 TSLMISHVDKSFLNKAFAIFCLLMGILMLKR-------------DRLYCERKFPDNYVKY 160
           +S   S + +  L    +      G+ +  R                   + F       
Sbjct: 87  SSGWSSLIPEDQLGFMTSGMLFASGLALWFRMMYVSRRSKASEVSAPPVVQGFRYWLQAL 146

Query: 161 IWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           + G++TG LSG  G+G   F  + LML  G S+  A  T+  V   IA            
Sbjct: 147 LIGLITGALSGLFGIGSTPFIQIGLMLVLGMSMRFAAGTTMLVIMPIALAGGAGY----- 201

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
                  +S+G++++  +  ++  ++  + +  K +  +   +L   
Sbjct: 202 -------FSIGYLDVQLLAAVVVGTMSGSYVGAKFTKRVPVVWLKTC 241


>gi|229550888|ref|ZP_04439613.1| possible permease [Lactobacillus rhamnosus LMS2-1]
 gi|258538399|ref|YP_003172898.1| permease [Lactobacillus rhamnosus Lc 705]
 gi|229315713|gb|EEN81686.1| possible permease [Lactobacillus rhamnosus LMS2-1]
 gi|257150075|emb|CAR89047.1| Permease [Lactobacillus rhamnosus Lc 705]
          Length = 280

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 90/269 (33%), Gaps = 50/269 (18%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           +GGG+++ P+L+           + +  A+G S+  +  TS  + + + +   +N+++  
Sbjct: 23  IGGGMIITPILTMLM-------GLPIQYAIGASIVSVIATSSGATIAYLKDEMLNLRVAM 75

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY------------- 148
                  +  V+ +++   V+   L   F    +     M+++ R+              
Sbjct: 76  FLEIATTVGAVIGAVITGLVNGKVLYILFGALLIFSAFNMIRKLRMKDDGVRQTTPDAMA 135

Query: 149 -----------------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGA 190
                                  +    +      G  SG LG+G G F  + M      
Sbjct: 136 TKLRLNGTYFDKATGKEVNYTVTNVPGGFAMMFGAGIASGLLGIGSGAFKVIAMDTIMHM 195

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            +  ++ATS  +  + A  +  V  + G     +               +    ++   +
Sbjct: 196 PLKPSSATSNLMMGVTAAASATVYYFGGQLQPQI------------AAPLAIGILVGATV 243

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +++  ++  K L + F  ++       A
Sbjct: 244 GSRVMQVLPNKVLRLIFIPVIGYMGIQMA 272



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV----AMGTSLGVIAPTSVMSF 86
           F +G  SGL G+G G   V           I     MH+    +  TS  ++  T+  S 
Sbjct: 168 FGAGIASGLLGIGSGAFKV-----------IAMDTIMHMPLKPSSATSNLMMGVTAAASA 216

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +   G +  +I       + +   V S ++  +    L   F      MGI M  +
Sbjct: 217 TVYYFGGQLQPQIAAPLAIGILVGATVGSRVMQVLPNKVLRLIFIPVIGYMGIQMALK 274


>gi|86132622|ref|ZP_01051215.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
 gi|85816864|gb|EAQ38049.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
          Length = 270

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 8/120 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI++   L G ++G+ G GGG +++P L           +I M VA+GTSL +IA  S+M
Sbjct: 151 LILIEGLLVGAITGMIGAGGGFLIIPALVIL-------ANIKMKVAVGTSLIIIAFKSLM 203

Query: 85  SFM-EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            F         ++   L  +  +  I   + S + + +D   L K F  F   M I +  
Sbjct: 204 GFFLGDALTMNVDWVFLSIFTLISLIGIFIGSYLSNFIDGQKLKKGFGYFIFAMAIFIFY 263



 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 95/249 (38%), Gaps = 37/249 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VPVL+  F       S+   VA   SL ++  ++++  ++    G ++ +    +   
Sbjct: 29  LAVPVLAYLF-------SVNEKVATAYSLFIVGASALVGGLKQHLKGYVDWRTAVVFGIP 81

Query: 107 LPIT-TVVTSLMISHVDKSFLNK-------------AFAIFCLLMGILMLKRDRLYCERK 152
             +  TVV   ++  +                     FAI  +     MLK+ +   E+ 
Sbjct: 82  AIVGVTVVRHYVVPALPDVLFTIGDFDFTRRMAMFGLFAILMIPAAFSMLKKRKECPEKN 141

Query: 153 ----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIA 207
                 +  +  I G++ G ++G +G GGG      L++     +  A  TS     +IA
Sbjct: 142 DGKVSYNYPLILIEGLLVGAITGMIGAGGGFLIIPALVILANIKMKVAVGTSL---IIIA 198

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F +L+   + G  L     W    V +    +I  I I    + + LS  I  + L  GF
Sbjct: 199 FKSLMGF-FLGDALTMNVDW----VFLSIFTLISLIGIF---IGSYLSNFIDGQKLKKGF 250

Query: 268 SMIMFTTSF 276
              +F  + 
Sbjct: 251 GYFIFAMAI 259


>gi|241202991|ref|YP_002974087.1| hypothetical protein Rleg_0237 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856881|gb|ACS54548.1| protein of unknown function DUF81 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 307

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 98/292 (33%), Gaps = 56/292 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   I +I+      G LSG+FGVGGG ++ P+L           +I   V
Sbjct: 1   MTIYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPVV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    +  +S+   + H R G++++K+    +        V   + S +        
Sbjct: 53  AVATGANQVVASSISGAITHFRRGSLDVKLGTVLLVGGLTGATVGIWIFSLLRAIGQLDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            ++  + +F   +G LML                                + R    + +
Sbjct: 113 IISLMYVVFLGTVGGLMLLESINAMRRAARNEPPAPRKPGHQHWVHKLPLKVRFKKSKIY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G   G L+  +GVGGG      M++           TS      +     +
Sbjct: 173 LSVIPIVALGFAIGILTSIMGVGGGFIMVPAMIYLLRIPTNVVVGTSLFQIIFVTAYTTI 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           V+  + +            V+I    I++   ++      ++   +  + L 
Sbjct: 233 VQAATNFS-----------VDIVLAFILMVAGVIGAQYGVRVGQKLRGEQLR 273



 Score = 43.5 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 8/124 (6%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           ++   L V   K  +   +  I+   F  G L+ + GVGGG +MVP +    +       
Sbjct: 157 VHKLPLKVRFKKSKIYLSVIPIVALGFAIGILTSIMGVGGGFIMVPAMIYLLR------- 209

Query: 65  ICMHVAMGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           I  +V +GTSL  I   T+  + ++   + ++++ +    +    I       +   +  
Sbjct: 210 IPTNVVVGTSLFQIIFVTAYTTIVQAATNFSVDIVLAFILMVAGVIGAQYGVRVGQKLRG 269

Query: 124 SFLN 127
             L 
Sbjct: 270 EQLR 273


>gi|184158012|ref|YP_001846351.1| permease [Acinetobacter baumannii ACICU]
 gi|332874472|ref|ZP_08442375.1| hypothetical protein HMPREF0022_01994 [Acinetobacter baumannii
           6014059]
 gi|183209606|gb|ACC57004.1| predicted permease [Acinetobacter baumannii ACICU]
 gi|323517955|gb|ADX92336.1| permease [Acinetobacter baumannii TCDC-AB0715]
 gi|332737316|gb|EGJ68240.1| hypothetical protein HMPREF0022_01994 [Acinetobacter baumannii
           6014059]
          Length = 294

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 93/278 (33%), Gaps = 44/278 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  L G   G+ GVGGG +M P+L   F+       I  H+A+GT L   A +    
Sbjct: 7   FILAGMLVGFCVGITGVGGGSLMTPILIGLFR-------IEPHIAIGTDLLYAAISKFCG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
            M H +   I   I+          +  T+ ++ H           L         L G+
Sbjct: 60  SMVHAKKLNIVWPIVLWLAVGSIPASFGTAWVLEHYLSQSTHYKAVLTMVLGFMLTLTGV 119

Query: 140 LMLKRDRLYCERK-----------------FPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++ R R+                              I G++ G       VG G F  
Sbjct: 120 SIIFRTRIEKFFNKFRNKENTQTENEQLAVQNKRTYIVIMGIILGVFVTLSSVGAGAFGI 179

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
           + ++       + +   +    + L+              + GL   S G V+   ++ +
Sbjct: 180 MALVIMFPNLPMIRIIGSDVVHAVLLTL------------VAGLGHMSAGNVDFMLLMWL 227

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L  SI    + T +S  + ++ +     + +F     F
Sbjct: 228 LVGSIPAIIIGTLISSRMPERLIRKILGITLFALGVNF 265



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 49/128 (38%), Gaps = 7/128 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I++   + G    L  VG G   +  L   F       ++ M   +G+ +      ++
Sbjct: 154 TYIVIMGIILGVFVTLSSVGAGAFGIMALVIMF------PNLPMIRIIGSDVVHAVLLTL 207

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-ML 142
           ++ + H   G ++  +L   +       ++ +L+ S + +  + K   I    +G+  M+
Sbjct: 208 VAGLGHMSAGNVDFMLLMWLLVGSIPAIIIGTLISSRMPERLIRKILGITLFALGVNFMV 267

Query: 143 KRDRLYCE 150
              +   +
Sbjct: 268 HPVKAKPK 275


>gi|257077326|ref|ZP_05571687.1| permease [Ferroplasma acidarmanus fer1]
          Length = 252

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 95/263 (36%), Gaps = 26/263 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +    I+   + G L+G+ G  G + +VP L          +S     A+GTSL +   T
Sbjct: 5   FYLEFIILGIIVGALTGVLGSSGVVAVVPALIII-------NSELPQEAIGTSLLIDVIT 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           SVM    + + G +N+K     I    I + +   +   +    +   FA+F + MGI  
Sbjct: 58  SVMVAYVYFKRGRVNIKKGIPMILGAIIGSQIGVRIAFLIPAESVKIGFAVFIIAMGIYS 117

Query: 142 LKRDRLYCERK------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI-YK 194
           L R +     K          +   +  +  G  +G LG  GGI   ++ +         
Sbjct: 118 LIRRKEMQNTKDTQRLLNIKPWEIVLITIPVGLATGILGASGGIMFLIISILILKLDIKT 177

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A  TS     + A    +  + +            G + I A LII  ISIL   + +++
Sbjct: 178 AVGTSTFSMIISASSGTVGYLIA------------GHIMIIAALIIGSISILSGLIFSRI 225

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              I           +      V
Sbjct: 226 GNNINPLSTYKILGTVFIIIGIV 248


>gi|260553916|ref|ZP_05826183.1| permease [Acinetobacter sp. RUH2624]
 gi|260404948|gb|EEW98451.1| permease [Acinetobacter sp. RUH2624]
          Length = 294

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 93/278 (33%), Gaps = 44/278 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  L G   G+ GVGGG +M P+L   F+       I  H+A+GT L   A +    
Sbjct: 7   FILAGMLVGFCVGITGVGGGSLMTPILIGLFR-------IEPHIAIGTDLLYAAISKFCG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
            M H +   I   I+          +  T+ ++ H           L         L G+
Sbjct: 60  SMVHAKKLNIVWPIVLWLAVGSIPASFGTAWVLEHYLSQSTHYKAVLTMVLGFMLTLTGV 119

Query: 140 LMLKRDRLYCERK-----------------FPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++ R R+                              I G++ G       VG G F  
Sbjct: 120 SIIFRTRIEKFFNKFRNKENTQTENEQLAVQNKRTYIVIMGIILGVFVTLSSVGAGAFGI 179

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
           + ++       + +   +    + L+              + GL   S G V+   ++ +
Sbjct: 180 MALVIMFPNLPMIRIIGSDVVHAVLLTL------------VAGLGHMSAGNVDFMLLMWL 227

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L  SI    + T +S  + ++ +     + +F     F
Sbjct: 228 LVGSIPAIIIGTLISSRMPERLIRKILGITLFALGVNF 265



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 49/128 (38%), Gaps = 7/128 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I++   + G    L  VG G   +  L   F       ++ M   +G+ +      ++
Sbjct: 154 TYIVIMGIILGVFVTLSSVGAGAFGIMALVIMF------PNLPMIRIIGSDVVHAVLLTL 207

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-ML 142
           ++ + H   G ++  +L   +       ++ +L+ S + +  + K   I    +G+  M+
Sbjct: 208 VAGLGHMSAGNVDFMLLMWLLVGSIPAIIIGTLISSRMPERLIRKILGITLFALGVNFMV 267

Query: 143 KRDRLYCE 150
              +   +
Sbjct: 268 HPVKAKPK 275


>gi|169633514|ref|YP_001707250.1| hypothetical protein ABSDF1886 [Acinetobacter baumannii SDF]
 gi|239501867|ref|ZP_04661177.1| hypothetical protein AbauAB_06100 [Acinetobacter baumannii AB900]
 gi|169152306|emb|CAP01222.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter baumannii]
          Length = 295

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 93/278 (33%), Gaps = 44/278 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  L G   G+ GVGGG +M P+L   F+       I  H+A+GT L   A +    
Sbjct: 7   FILAGMLVGFCVGITGVGGGSLMTPILIGLFR-------IEPHIAIGTDLLYAAISKFCG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
            M H +   I   I+          +  T+ ++ H           L         L G+
Sbjct: 60  SMVHAKKLNIVWPIVLWLAVGSIPASFGTAWVLEHYLSQSTHYKAVLTMVLGFMLTLTGV 119

Query: 140 LMLKRDRLYCERK-----------------FPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++ R R+                              I G++ G       VG G F  
Sbjct: 120 SIIFRTRIEKFFNKFRNKENTQTENEQLAVQNKRTYIVIMGIILGVFVTLSSVGAGAFGI 179

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
           + ++       + +   +    + L+              + GL   S G V+   ++ +
Sbjct: 180 MALVIMFPNLPMIRIIGSDVVHAVLLTL------------VAGLGHMSAGNVDFMLLMWL 227

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L  SI    + T +S  + ++ +     + +F     F
Sbjct: 228 LVGSIPAIIIGTLISSRMPERLIRKILGITLFALGVNF 265



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 49/128 (38%), Gaps = 7/128 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I++   + G    L  VG G   +  L   F       ++ M   +G+ +      ++
Sbjct: 154 TYIVIMGIILGVFVTLSSVGAGAFGIMALVIMF------PNLPMIRIIGSDVVHAVLLTL 207

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-ML 142
           ++ + H   G ++  +L   +       ++ +L+ S + +  + K   I    +G+  M+
Sbjct: 208 VAGLGHMSAGNVDFMLLMWLLVGSIPAIIIGTLISSRMPERLIRKILGITLFALGVNFMV 267

Query: 143 KRDRLYCE 150
              +   +
Sbjct: 268 HPVKAKPK 275


>gi|163845495|ref|YP_001623150.1| hypothetical protein BSUIS_B1409 [Brucella suis ATCC 23445]
 gi|163676218|gb|ABY40328.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 289

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/285 (17%), Positives = 94/285 (32%), Gaps = 49/285 (17%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + VA+F +  L G+ G+  G+ +VP+L+  F        I +HVA+  SL  +   S 
Sbjct: 13  LWLFVAAFGASMLGGMLGMASGIFIVPLLTSIF-------GIDIHVAIAASLISVIACSC 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S     +    N+++         +       +I  +  ++L   FA   +L    ML 
Sbjct: 66  GSAAPLLKERLTNIRLAVVLETATTLGAFTGVFLIGVIPTAYLYLMFANILVLSAWQMLV 125

Query: 144 RDRLYCERKFP--------------------DNYVKYIWGMV---------TGFLSGALG 174
           R R   +   P                      +  Y  G +          G +S  LG
Sbjct: 126 RRREMPQTNRPASRTWATLLRLHSAVPDRSSGKFTSYQVGSLPLGLSLMYGAGLVSALLG 185

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G+     M       I  ++ATS  +  +    +                +  G +N
Sbjct: 186 IGSGVLKIPAMDTALRLPIKVSSATSNFMIGVTGAASAGAY------------FMRGDIN 233

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 +   S+L      ++   I    L I F +++   +   
Sbjct: 234 TAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAIAM 278



 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + L +   + +G +S L G+G G++ +P +  A +L        + V+  TS  +I 
Sbjct: 164 VGSLPLGLSLMYGAGLVSALLGIGSGVLKIPAMDTALRL-------PIKVSSATSNFMIG 216

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T   S   +   G IN  I         +  V  + +++ +    L   F I  +L+ I
Sbjct: 217 VTGAASAGAYFMRGDINTAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAI 276

Query: 140 LM 141
            M
Sbjct: 277 AM 278


>gi|312142636|ref|YP_003994082.1| protein of unknown function DUF81 [Halanaerobium sp. 'sapolanicus']
 gi|311903287|gb|ADQ13728.1| protein of unknown function DUF81 [Halanaerobium sp. 'sapolanicus']
          Length = 256

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 79/214 (36%), Gaps = 19/214 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I +I++A F +G ++GL G    +++ P L                 A+G SL      S
Sbjct: 4   IFIILIAGFGAGVVTGLVGASAVVIVTPFLVTFLGYDPYS-------AIGISLATDVVAS 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +S   ++ HG IN+K             ++ S     ++ + L     +  LL GI   
Sbjct: 57  SVSAYTYKSHGNINIKGGLLIAISAVTAAIIGSWFSGGMNSTTLGGMTGVIILLTGISFT 116

Query: 143 KRDRLYCERKFPDN-----------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGA 190
           ++       +F +            +   ++G + G ++G  G GGG+   +++ F    
Sbjct: 117 RKPINQRVEEFKNKFDLNFFRERTRFSSILFGTLIGLMTGVFGAGGGVMILIVLTFVLDY 176

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
             + A  TS  + A  AF               L
Sbjct: 177 KTHIAIGTSVLIMAFTAFFGSASHFIVEQHFPYL 210


>gi|167765892|ref|ZP_02437945.1| hypothetical protein CLOSS21_00383 [Clostridium sp. SS2/1]
 gi|167712390|gb|EDS22969.1| hypothetical protein CLOSS21_00383 [Clostridium sp. SS2/1]
          Length = 262

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 103/266 (38%), Gaps = 25/266 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  I +   A   +G  +G  G+    V+ P+L    ++          +A+G +L   
Sbjct: 7   ILLTIAVTFFAGMGAGLGTGFAGMSAAAVISPMLITFLKMDPY-------MAVGIALSSD 59

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              S +S   + ++  +++K     +  +   TVV S + S +  + +         L+G
Sbjct: 60  VLASAVSAYIYGKNKNLDIKNGIIMMISVLTFTVVGSYIASLLPAATMGSFSVFMTFLLG 119

Query: 139 ILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
           I  + R  +  +        K       + G++ G + G +G GGG+   L++    G  
Sbjct: 120 IKFIVRPVMTTKEAMQGVSAKKRAIQSVVCGIMIGLICGFVGAGGGMMMLLILTSVLGYE 179

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           +  A  TS  + A  AF   +      + + G P W++        ++ +  +++   +A
Sbjct: 180 LKTAVGTSVFIMAFTAFTGAVSH----FMIVGAPDWTV-------FILCIVFTLIGARIA 228

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + +     + L     +I+     V
Sbjct: 229 ARFANKATPETLNRATGVILVILGIV 254



 Score = 42.0 bits (98), Expect = 0.085,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 8/117 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +V   + G + G  G GGG++M+ +L+             +  A+GTS+ ++A T+    
Sbjct: 147 VVCGIMIGLICGFVGAGGGMMMLLILTSVL-------GYELKTAVGTSVFIMAFTAFTGA 199

Query: 87  MEHRRH-GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + H    G  +  +    I    I   + +   +      LN+A  +  +++GI++L
Sbjct: 200 VSHFMIVGAPDWTVFILCIVFTLIGARIAARFANKATPETLNRATGVILVILGIVVL 256


>gi|108761854|ref|YP_634293.1| hypothetical protein MXAN_6162 [Myxococcus xanthus DK 1622]
 gi|108465734|gb|ABF90919.1| putative membrane protein [Myxococcus xanthus DK 1622]
          Length = 288

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 53/290 (18%), Positives = 99/290 (34%), Gaps = 51/290 (17%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             +  +  A+F +  L G+ G+  G+ +VP+L+  F       SI +HVA+G S+  +  
Sbjct: 4   TMVFWLFAAAFGASALGGVLGMASGIFIVPILTLFF-------SIDIHVAIGASIISVIA 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S     +    N+++         +  +    +I  V  SFL   F+    L    
Sbjct: 57  CSCGSAAPLLKKRLTNIRLAIVLETATTLGALTGVFLIGIVSNSFLYGLFSFILALSAKQ 116

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMV-------------------------------TGFL 169
           ML R R           VK +  ++                                G +
Sbjct: 117 MLARRREVEVVATSGPNVKSLATVLRLHSSFPDHASGRDVPYQVGHVPISLALMYGAGVI 176

Query: 170 SGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           S  LG+G G+     M       I  ++ATS  +  + A  +                  
Sbjct: 177 SALLGIGSGVLKIPAMDTALRLPIKVSSATSNFMIGVTAAASAGAYFVR----------- 225

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            G ++IG    +   S++   +  +L   +  + + I F +I+   +   
Sbjct: 226 -GDIDIGIAGPVALGSVVGALVGARLLMRLPAEKIRISFVVILTLLAVQM 274



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 55/125 (44%), Gaps = 7/125 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V ++ + +   + +G +S L G+G G++ +P +  A +L        + V+  TS  +I 
Sbjct: 160 VGHVPISLALMYGAGVISALLGIGSGVLKIPAMDTALRL-------PIKVSSATSNFMIG 212

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   +   G I++ I         +  +V + ++  +    +  +F +   L+ +
Sbjct: 213 VTAAASAGAYFVRGDIDIGIAGPVALGSVVGALVGARLLMRLPAEKIRISFVVILTLLAV 272

Query: 140 LMLKR 144
            ML  
Sbjct: 273 QMLLS 277


>gi|218673769|ref|ZP_03523438.1| putative permease protein [Rhizobium etli GR56]
          Length = 306

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 98/292 (33%), Gaps = 56/292 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   I +I+      G LSG+FGVGGG ++ P+L           +I   V
Sbjct: 1   MTIYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPVV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KS 124
           A+ T    +  +S+   + H R GT+++K+    +        V   + S +        
Sbjct: 53  AVATGANQVVASSISGAITHFRRGTLDVKLGTVLLVGGLSGATVGIWIFSLLRRVGQLDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            ++  + IF   +G LML                                + R    + F
Sbjct: 113 MISLMYVIFLGTVGGLMLLESINAMRRAARNEPPVPRKPGHQHWVHKLPLKVRFKKSKIF 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G   G L+  +GVGGG      M++           TS      +     +
Sbjct: 173 LSVIPIVALGFAIGILTSIMGVGGGFIMVPAMIYLLRIPTNVVVGTSLYQIIFVTAYTTI 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           V+  + +            V+I    I++   ++      ++   +  + L 
Sbjct: 233 VQAATNFS-----------VDIVLAFILMVAGVIGAQYGVRVGQKLRGEQLR 273



 Score = 43.1 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 8/124 (6%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           ++   L V   K  +   +  I+   F  G L+ + GVGGG +MVP +    +       
Sbjct: 157 VHKLPLKVRFKKSKIFLSVIPIVALGFAIGILTSIMGVGGGFIMVPAMIYLLR------- 209

Query: 65  ICMHVAMGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           I  +V +GTSL  I   T+  + ++   + ++++ +    +    I       +   +  
Sbjct: 210 IPTNVVVGTSLYQIIFVTAYTTIVQAATNFSVDIVLAFILMVAGVIGAQYGVRVGQKLRG 269

Query: 124 SFLN 127
             L 
Sbjct: 270 EQLR 273


>gi|241889910|ref|ZP_04777208.1| permease [Gemella haemolysans ATCC 10379]
 gi|241863532|gb|EER67916.1| permease [Gemella haemolysans ATCC 10379]
          Length = 282

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 88/263 (33%), Gaps = 53/263 (20%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++ P L+  F          +  A+G S+  +  TS  S +   +    NM++      
Sbjct: 27  IIITPALTILFGFD-------IKYAIGASIVAVIATSSGSAIAFVKDHVSNMRVGMLLEV 79

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR----------------DRLYC 149
                 VV +LM        L   F++  L     MLK+                D+   
Sbjct: 80  FTTAGGVVGALMAGVFSSKLLYIFFSLILLNSFYGMLKKTGLITKLKKEEENVENDKYAD 139

Query: 150 ERKFPDNYVKYIWG-----------------MVTGFLSGALGVGGGIFTNLLM-LFYGAS 191
           + K    Y     G                    GF SG LG+G G F  + +  +    
Sbjct: 140 KYKLNSTYYDKATGETVKYNVTNVPQGSLVMFGAGFASGLLGIGSGAFKVVALDTYMKLP 199

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           I  +TATS  +  + A  + L+  ++G             +N      I   +++ +   
Sbjct: 200 IKVSTATSNFMMGVTATASALIYFFNGT------------INPVVAAPIAIGTLIGSRTG 247

Query: 252 TKLSYMIGKKYLTIGFSMIMFTT 274
            K+   +  KY+   F  I+  T
Sbjct: 248 AKVMQRLDAKYIRYIFLPILLFT 270



 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G  SGL G+G G   V  L    +L        + V+  TS  ++  T+  S + + 
Sbjct: 171 FGAGFASGLLGIGSGAFKVVALDTYMKL-------PIKVSTATSNFMMGVTATASALIYF 223

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +GTIN  +         I +   + ++  +D  ++   F    L   I M  +
Sbjct: 224 FNGTINPVVAAPIAIGTLIGSRTGAKVMQRLDAKYIRYIFLPILLFTIINMFLK 277


>gi|220929939|ref|YP_002506848.1| permease [Clostridium cellulolyticum H10]
 gi|220000267|gb|ACL76868.1| permease [Clostridium cellulolyticum H10]
          Length = 123

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 7/118 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+    +G  +GLFG GGG + VP +               H A  T+L +I P +++S
Sbjct: 13  YILTGLAAGVANGLFGSGGGTIAVPAMVFLL-------DADEHKAHATALLIILPLTLVS 65

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              +  +  ++  I    +    +   + + +++    + L K F IF +L  I M+ 
Sbjct: 66  TYFYLSNNYVDWNITWKAMAGGVVGGAIGAFLLNKCPSNVLRKIFGIFMILAAIRMIF 123



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 38/120 (31%), Gaps = 13/120 (10%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
            + G+  G  +G  G GGG      M+F   A  +KA AT+  +   +   +    + + 
Sbjct: 14  ILTGLAAGVANGLFGSGGGTIAVPAMVFLLDADEHKAHATALLIILPLTLVSTYFYLSNN 73

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                       +V+       +   ++   +   L        L   F + M   +   
Sbjct: 74  ------------YVDWNITWKAMAGGVVGGAIGAFLLNKCPSNVLRKIFGIFMILAAIRM 121


>gi|209694679|ref|YP_002262607.1| membrane protein [Aliivibrio salmonicida LFI1238]
 gi|208008630|emb|CAQ78813.1| membrane protein [Aliivibrio salmonicida LFI1238]
          Length = 256

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 106/276 (38%), Gaps = 32/276 (11%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M FL    ++    ++ + +F++G +  + G GGG++ VP L            +  H+A
Sbjct: 1   MEFLEPSTLI----ILGLVAFVAGFIDAVAG-GGGMLTVPALLSI--------GLPPHIA 47

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+       S  + + + +    + +  K       +     +L+++++   +L K  
Sbjct: 48  LGTNKLAATFASSTAAITYFKKKLFDPQFWKASFIATLLGATCGTLLVNYISTEWLEKGL 107

Query: 131 AIFCLLMGILMLKRDR-LYCERKFPDNYVKY-----IWGMVTGFLSGALGVGGGIF-TNL 183
            +  L   I  +  +R +  + + P+   K+     I G+  GF  G  G G G F T  
Sbjct: 108 PLIILGAAIYTIWPNRLISEQNQLPEKTPKFKKQQIIQGLSLGFYDGVAGPGTGAFWTVS 167

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
            M  Y  +I  A+  +  ++      +L+                LG +N    L +   
Sbjct: 168 SMALYRLNILLASGLAKAMNFTSNITSLVTFAI------------LGQINWALGLTMGIC 215

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            ++   L    +   G K++   F  ++   +   A
Sbjct: 216 LMVGAFLGAHSAIRFGSKFIRPVFVTVVCILAAKLA 251


>gi|13474679|ref|NP_106248.1| hypothetical protein mll5620 [Mesorhizobium loti MAFF303099]
 gi|14025434|dbj|BAB52034.1| mll5620 [Mesorhizobium loti MAFF303099]
          Length = 307

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 90/279 (32%), Gaps = 56/279 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G LSG+FGVGGG ++ P+L           +I   +A+ T    +  +S
Sbjct: 14  VFVLLAMGAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPAIAVATGANQVIASS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
           V   + H + GT++ K+    +    I +     + + +        F++  + +    +
Sbjct: 66  VSGVLSHMKRGTLDFKLGGVLLAGGIIGSTAGIYVFAFLRRLGQLDLFISLLYVVLLGTV 125

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R    + F         G   
Sbjct: 126 GGLMLVESINALRATRSGAAPVLKKSGQHNWIHRLPLKMRFRASKLFVSVIPVLGLGAGI 185

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           GFLS  +GVGGG      +++           TS       +    LV   +        
Sbjct: 186 GFLSSIMGVGGGFIMVPALIYLLKVPTNVVIGTSLFQIIFTSAYTTLVHATTNQT----- 240

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
                 V++    +++   +       K    +  + L 
Sbjct: 241 ------VDVVLAFLLMAGGVAGAQYGAKAGQRLRGEQLR 273


>gi|319785588|ref|YP_004145064.1| hypothetical protein Mesci_6007 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317171476|gb|ADV15014.1| protein of unknown function DUF81 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 307

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 91/279 (32%), Gaps = 56/279 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I +++      G LSG+FGVGGG ++ P+L           +I   +A+ T    +  +S
Sbjct: 14  IFVLLAMGAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPAIAVATGANQVIASS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
           V   + H + GT+++K+    +    + +     + + +        F++  + +    +
Sbjct: 66  VSGVLSHMKRGTLDLKLGGVLLAGGIVGSTGGIYVFAFLRRLGQLDLFISLLYVVLLGTV 125

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R    + F         G   
Sbjct: 126 GGLMLVESVNALRATRSGAAPVLKKSGQHNWIHRLPLKMRFRASKLFVSVIPVLGLGAGI 185

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           GFLS  +GVGGG      +++           TS       +    LV   +        
Sbjct: 186 GFLSSIMGVGGGFIMVPALIYLLKVPTNVVIGTSLFQIIFTSAYTTLVHATTNQT----- 240

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
                 V++    +++   +       K    +  + L 
Sbjct: 241 ------VDVVLAFLLMAGGVAGAQYGAKAGQRLRGEQLR 273


>gi|291542778|emb|CBL15888.1| Predicted permeases [Ruminococcus bromii L2-63]
          Length = 259

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 91/256 (35%), Gaps = 25/256 (9%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +   I +   A   +G  +G  G+    V+ P+L     +          +A+G +L  
Sbjct: 2   DIFITILVTFFAGMGAGLGTGFAGMSAAAVISPMLITFLNMDPY-------MAVGIALSS 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
               S +S   + ++  ++++     +  +   T+V S + S V  + +         L+
Sbjct: 55  DVLASAVSAYTYHKNKNLDVRNGLIMMASVLAFTIVGSYVASIVPSATMGGFSVFMTFLL 114

Query: 138 GILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLM-LFYGA 190
           GI  + R  +  +        K       I GM+ GF+ G +G GGG+   L++      
Sbjct: 115 GIKFIIRPVMTTKEAMLGVSAKKRAIQSVICGMLIGFICGFIGAGGGMMMLLILTTVLNY 174

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            +  A  TS  +    A          G    G P W +        ++ +  +++   +
Sbjct: 175 ELKTAVGTSVFIMTFTALTGAASHFMIG----GTPDWFV-------FILCIAFTLIWARI 223

Query: 251 ATKLSYMIGKKYLTIG 266
           A   +     K L   
Sbjct: 224 AAVFANKANPKTLNRA 239


>gi|59711615|ref|YP_204391.1| inner membrane protein [Vibrio fischeri ES114]
 gi|59479716|gb|AAW85503.1| conserved inner membrane protein [Vibrio fischeri ES114]
          Length = 256

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 102/276 (36%), Gaps = 32/276 (11%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M FL    ++    ++ + +F++G +  + G GGG++ VP L            +  H+A
Sbjct: 1   MEFLEPSTLI----ILGLVAFIAGFIDAVAG-GGGMLTVPALLSI--------GLPPHIA 47

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+    +  S  + + + +    +    K             +L+++++   +L K  
Sbjct: 48  LGTNKLAASFASSTAALTYFKKKLFDPHFWKTSFVATLFGATCGTLLVNYISTEWLEKGL 107

Query: 131 AIFCLLMGILMLKRDRLYC-ERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIF-TNL 183
            +  L   I  +   +    + + P         + I G+  GF  G  G G G F T  
Sbjct: 108 PLIILAAAIYTIWHPQPKADQNQLPGITPKLKTQQIIQGLSLGFYDGVAGPGTGAFWTVS 167

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
            M  Y  +I  A+  +  ++    F +L+                LG +N    L +   
Sbjct: 168 SMAMYRLNILLASGLAKAMNFTSNFTSLVTFAI------------LGHINWALGLTMGVC 215

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            ++   +    +   G K++   F  ++   +   A
Sbjct: 216 LMVGAFIGAHSAIRFGSKFIRPVFVTVVCILAVKLA 251


>gi|290893716|ref|ZP_06556697.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Listeria
           monocytogenes FSL J2-071]
 gi|290556789|gb|EFD90322.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Listeria
           monocytogenes FSL J2-071]
          Length = 256

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 82/244 (33%), Gaps = 41/244 (16%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            I +  A+G S+  +  TS  S + + + G  N+++         I  +  + +   +  
Sbjct: 17  GIDIQYAIGASIISVIATSSGSAIAYIKDGITNLRVGMFLEIATTIGAITGAFVSGLLSA 76

Query: 124 SFLNKAFAIFCLLMGILMLKR----------------------------DRLYCERKFPD 155
           + L   F +  L     M+K+                             R   + +  +
Sbjct: 77  TALYIIFGLLLLYSAFNMIKKVGTEFPTNVKPDPLATKLNLHDSYYDKSLRQTVDYQVAN 136

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVR 214
               +      G  SG LG+G G F  + + +F    +  ++ATS  +  + A  +  V 
Sbjct: 137 VPAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSATSNLMMGVTAAASATVY 196

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           ++ G     +               +    ++   L T++   +  K + I F  ++   
Sbjct: 197 LFQGDIQPAI------------AAPVAIGVLVGATLGTRIMQRLKSKVIRIIFIPVILYV 244

Query: 275 SFVF 278
           +F  
Sbjct: 245 AFQM 248



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  SGL G+G G   V         + +   + + V+  TS  ++  T+  S   +   
Sbjct: 147 AGIASGLLGIGSGAFKV-------MALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQ 199

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           G I   I       + +   + + ++  +    +   F    L +   M+ 
Sbjct: 200 GDIQPAIAAPVAIGVLVGATLGTRIMQRLKSKVIRIIFIPVILYVAFQMIL 250


>gi|312792611|ref|YP_004025534.1| hypothetical protein Calkr_0368 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179751|gb|ADQ39921.1| protein of unknown function DUF81 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 276

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 81/244 (33%), Gaps = 44/244 (18%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           MH A    L  +  TS  +   + +    +++I         I  V+ +++   +    L
Sbjct: 39  MHQAAAAGLVSVIATSSGAASAYVKDRLTHLRIGMFLQLATVIGGVLGAILSGFLPAKVL 98

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFPDN------------------------------ 156
           +  F I  L    LM+K  +   + +                                  
Sbjct: 99  SLIFGILLLYNSFLMIKNRKSVEKPQLASPKISKWAKRLKLYGSYFDKIQNREIEYSAQN 158

Query: 157 -YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVR 214
               ++     G LSG LG+G GIF  L +          +TATS  +  + A  ++ + 
Sbjct: 159 IAGGFLMMTFAGILSGLLGIGSGIFKVLALDTIMKLPFKVSTATSNFMMGVTALASISIY 218

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +  G  +              A   +    ++ + +  +L   I  KYL   F++I+  T
Sbjct: 219 LARGDIVYD------------ACGAVAVGVLVGSAIGARLMPYIKSKYLRTAFALILIYT 266

Query: 275 SFVF 278
           S   
Sbjct: 267 SIEM 270



 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
            +G LSGL G+G G+  V  L    +L          V+  TS  ++  T++ S   +  
Sbjct: 168 FAGILSGLLGIGSGIFKVLALDTIMKL-------PFKVSTATSNFMMGVTALASISIYLA 220

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G I           + + + + + ++ ++   +L  AFA+  +   I M+++
Sbjct: 221 RGDIVYDACGAVAVGVLVGSAIGARLMPYIKSKYLRTAFALILIYTSIEMIRK 273


>gi|312960682|ref|ZP_07775188.1| protein of unknown function DUF81 [Pseudomonas fluorescens WH6]
 gi|311285208|gb|EFQ63783.1| protein of unknown function DUF81 [Pseudomonas fluorescens WH6]
          Length = 259

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 95/264 (35%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L  A    G+      H+ +GT+     
Sbjct: 9   LTTLAILAVVAFIAGFIDAIAG-GGGLLTTPALLTA----GMPP----HLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     I    +  +V +++  ++    LNK   +     G+
Sbjct: 60  FGSATASFTFYRRKLFHPRQWVHAIVGTLVGALVGAVVAHYLPAETLNKMLPVIVFACGV 119

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G   GF  G  G G G F T   ML Y   + KA
Sbjct: 120 YLLFGGTPKAPLDAEAPIKKKWQATQGFGLGFYDGVAGPGTGAFWTVSTMLLYPIDLVKA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V I++G             V+    L +    +       + +
Sbjct: 180 SGVARSMNFVSNAAALSVFIFNGS------------VDWIVGLAMGVSVMCGAFFGARSA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 ISGGAKFIRPVFITVVLGLTVRLA 251


>gi|126730488|ref|ZP_01746299.1| membrane protein [Sagittula stellata E-37]
 gi|126709221|gb|EBA08276.1| membrane protein [Sagittula stellata E-37]
          Length = 304

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 94/275 (34%), Gaps = 53/275 (19%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG ++ P+L       GI  +    VA+ T    I   S    + H R  T++
Sbjct: 28  SGMFGVGGGFLLTPLLFFI----GIPPA----VAVATGANQIVAASFSGLLAHLRRKTVD 79

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGILML--------- 142
           +++    +    +   +  ++ +++         +   + +F  ++G LM          
Sbjct: 80  LRMGTVLLLGGLVGAGLGVMLFNYLKSLGQVDLLVRLCYVVFLGIIGGLMFIESLNALRK 139

Query: 143 -------KRDRLYCERKFP------------DNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
                  KR +       P                  + G   G L+  +GVGGG     
Sbjct: 140 ARAGARPKRRKHNWIHNLPLKMRFRTSGLYISVIPPALVGTAVGVLAAIMGVGGGFIMVP 199

Query: 184 LMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            M++  G        TS      +A    L+   + +            V++   ++++ 
Sbjct: 200 AMIYLLGMPTKVVVGTSLFQIIFVAAFTTLLHATTNYT-----------VDVVLAVMLIL 248

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             ++     T L   +  + L I  + ++      
Sbjct: 249 GGVVGAQFGTMLGTRLKAEQLRILLAGLVLLVCIK 283



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 55/141 (39%), Gaps = 8/141 (5%)

Query: 2   YDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI 61
           ++ ++N  L +      +   +    +     G L+ + GVGGG +MVP +         
Sbjct: 151 HNWIHNLPLKMRFRTSGLYISVIPPALVGTAVGVLAAIMGVGGGFIMVPAMIYLL----- 205

Query: 62  DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISH 120
              +   V +GTSL  I   +  + + H     T+++ +    I    +     +++ + 
Sbjct: 206 --GMPTKVVVGTSLFQIIFVAAFTTLLHATTNYTVDVVLAVMLILGGVVGAQFGTMLGTR 263

Query: 121 VDKSFLNKAFAIFCLLMGILM 141
           +    L    A   LL+ I +
Sbjct: 264 LKAEQLRILLAGLVLLVCIKL 284


>gi|329888691|ref|ZP_08267289.1| hypothetical protein BDIM_06180 [Brevundimonas diminuta ATCC 11568]
 gi|328847247|gb|EGF96809.1| hypothetical protein BDIM_06180 [Brevundimonas diminuta ATCC 11568]
          Length = 259

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 93/257 (36%), Gaps = 9/257 (3%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L ++   L+  + G  G+  G++     S     +G+  +     A  +      
Sbjct: 1   MDTFFLFLLVGVLAQAVDGALGMAYGVIS----SSVLLALGVPPAT----ASASVHAAEV 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H  H  +  ++L        I  V+ + +++ ++ S +      +  L+G+
Sbjct: 53  FTTAASAGSHAWHKNVEWRLLAPLAIAGVIGGVLGAYVLTGLEASTIKPFVVGYLALVGV 112

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            +L R       +    +V    G+V GFL    G G G   +  M+  G    KA  T 
Sbjct: 113 WILWRAGHDIRPRHLPAWVTAPLGLVGGFLDAVGGGGWGPTVSSTMVGAGHEPRKAIGTV 172

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                 +        +++    +     +L   +  AV  ++   ++  P A  +   + 
Sbjct: 173 NTAEFFLTVAVSATFVWALVSGHWEEAGAL-QNHAAAVGGLVVGGLIAAPFAGLIVKKVP 231

Query: 260 KKYLTIGFSMIMFTTSF 276
           +K LT     ++   + 
Sbjct: 232 RKALTYAVGFLLLILAA 248


>gi|326800586|ref|YP_004318405.1| siroheme synthase [Sphingobacterium sp. 21]
 gi|326551350|gb|ADZ79735.1| siroheme synthase [Sphingobacterium sp. 21]
          Length = 507

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 93/242 (38%), Gaps = 22/242 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
             + A F+   + G  G+  G+      S     MGI  +     +MG  L  +    + 
Sbjct: 259 YFLGAGFVFAMVDGAIGMSYGVTS----SSFSLAMGIPPAPA---SMGIHLSEVLSNGIA 311

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD--KSFLNKAFAIFCLLMGILML 142
               H R G +N K+ K  +    +  V+ + ++S ++   ++     A++  ++G+++L
Sbjct: 312 G-WMHYRMGNVNWKLFKLLLIPGVVGAVIGAYLLSSLEHYSAYTKPLVALYTGILGVVIL 370

Query: 143 KRDRLYCERKFPDNYVKY-IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
            +     + K      +  + G   GF+  A G G G      ++  G     +  T   
Sbjct: 371 MKAFNIKKNKKRKKIERIGLLGFFGGFIDAAFGGGWGSIVLSNLIAGGRHPLFSLGTVKI 430

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
               IA  + L  I             LG  +  AVL ++  S L  P+A K+S  I  K
Sbjct: 431 TRFFIAILSSLTFISM-----------LGGAHWEAVLGLILGSALAAPIAAKVSNRISAK 479

Query: 262 YL 263
            +
Sbjct: 480 TI 481


>gi|310779253|ref|YP_003967586.1| protein of unknown function DUF81 [Ilyobacter polytropus DSM 2926]
 gi|309748576|gb|ADO83238.1| protein of unknown function DUF81 [Ilyobacter polytropus DSM 2926]
          Length = 247

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 104/263 (39%), Gaps = 27/263 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ +  F +G +  + G GGGL+ VP L     + G+      H+A+GT+    A  S
Sbjct: 3   IVILGIGMFAAGFIDSIAG-GGGLISVPALL----MTGMPP----HMALGTNKMAAALGS 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S  E  +   +N ++LK  I    +  V+  + + ++    L          + I  +
Sbjct: 54  FTSSYEFFKSNKLNKQLLKMLIPFAFMGAVLGVVTVQYISPKILEILIPFMIFAVAIYTV 113

Query: 143 KRDRL-----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
              ++     Y      + ++  +     GF  G  G G G F    ++  +      AT
Sbjct: 114 ISKKVGMSNEYAGIDSKNGFLGKLLTSALGFYDGFFGPGTGTFFMFGLVKIFKFDFTVAT 173

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++    F ALL  I++G             VN+    I     I+ + + +K++ 
Sbjct: 174 ANTKVLNFTTGFAALLTFIFNGQ------------VNLKYGAISAIFIIVGSKMGSKMAI 221

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G +++   F ++    +F  A
Sbjct: 222 KNGARFIKPIFVIMSLVMAFKMA 244


>gi|312881226|ref|ZP_07741024.1| hypothetical protein VIBC2010_08493 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309371118|gb|EFP98572.1| hypothetical protein VIBC2010_08493 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 259

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 92/264 (34%), Gaps = 28/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ + +FL+G +  + G GGG++ VP L            +  H+A+GT+       S
Sbjct: 9   IVVLALVAFLAGFIDAVAG-GGGMLTVPTLLSL--------GLPPHIALGTNKLAATFAS 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R      +      F      ++ +L +  +   +L K   +  L   I  L
Sbjct: 60  STAAFTYYRKKLFKPRCWYRAFFATLAGAILGTLFVDQISTQWLEKILPLIILAAAIYTL 119

Query: 143 KRDRLY------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
                        E        +YI G+  GF  G  G G G F T   +  Y  +I  A
Sbjct: 120 LNKTPQNVNDEVPEPCPKFQRKQYIQGISLGFYDGVAGPGTGAFWTVSSIALYRLNILLA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++    F +L+                LG ++    L +    +    +    +
Sbjct: 180 SGVAKAMNVTSNFTSLVTFAI------------LGHIDWLLGLTMGACLMAGAFVGAHSA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 IRFGAKFIRPVFITVVSILAIKLA 251


>gi|163741796|ref|ZP_02149186.1| membrane protein [Phaeobacter gallaeciensis 2.10]
 gi|161384969|gb|EDQ09348.1| membrane protein [Phaeobacter gallaeciensis 2.10]
          Length = 307

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 109/305 (35%), Gaps = 56/305 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    V     L++    + G LSG+FGVGGG +M P+L       GI  +    V
Sbjct: 1   MQIYLPIAEVSVNAFLLLGLGGMVGILSGMFGVGGGFLMTPLLFFI----GIPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    I  +S    + H R  T+++K+         +   +  ++ +++        
Sbjct: 53  AVATEANQIVASSFSGVLAHFRRRTVDIKMGLVLQAGGLLGAALGVVVFNYLKALGQVDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            +   + +F  ++G LM                                 + R      +
Sbjct: 113 LVKLCYVVFLGVVGGLMFVESLNAIRKSKTSAGAAPAPRRQRGWVHALPFKMRFRTSGLY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                  + G+V G L+  +GVGGG      M++  G        TS     L+     +
Sbjct: 173 ISVIPPLLVGVVVGILAAIMGVGGGFIMVPAMIYILGMPTKVVVGTSLFQIILVTAFTTM 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           +   + +            V+I   +++L   ++   + T++   +  + L I  ++++ 
Sbjct: 233 LHATTNYT-----------VDIVLAVLLLVGGVIGAQIGTRIGVYLKAEQLRILLALMVI 281

Query: 273 TTSFV 277
                
Sbjct: 282 VVCVK 286



 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 50/126 (39%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L+ + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 179 LLVGVVVGILAAIMGVGGGFIMVPAMIYIL-------GMPTKVVVGTSLFQIILVTAFTT 231

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H     T+++ +    +    I   + + +  ++    L    A+  +++ + +    
Sbjct: 232 MLHATTNYTVDIVLAVLLLVGGVIGAQIGTRIGVYLKAEQLRILLALMVIVVCVKLGLDL 291

Query: 146 RLYCER 151
            L    
Sbjct: 292 LLMPSE 297


>gi|30263027|ref|NP_845404.1| hypothetical protein BA_3074 [Bacillus anthracis str. Ames]
 gi|47778117|ref|YP_019715.2| hypothetical protein GBAA_3074 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|65320336|ref|ZP_00393295.1| COG0730: Predicted permeases [Bacillus anthracis str. A2012]
 gi|167631914|ref|ZP_02390241.1| putative membrane protein [Bacillus anthracis str. A0442]
 gi|167637456|ref|ZP_02395736.1| putative membrane protein [Bacillus anthracis str. A0193]
 gi|170684700|ref|ZP_02875925.1| putative membrane protein [Bacillus anthracis str. A0465]
 gi|170704977|ref|ZP_02895442.1| putative membrane protein [Bacillus anthracis str. A0389]
 gi|177650036|ref|ZP_02933037.1| putative membrane protein [Bacillus anthracis str. A0174]
 gi|190565117|ref|ZP_03018038.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I]
 gi|227814125|ref|YP_002814134.1| hypothetical protein BAMEG_1533 [Bacillus anthracis str. CDC 684]
 gi|229602181|ref|YP_002867300.1| hypothetical protein BAA_3124 [Bacillus anthracis str. A0248]
 gi|254685618|ref|ZP_05149477.1| hypothetical protein BantC_17410 [Bacillus anthracis str.
           CNEVA-9066]
 gi|254723026|ref|ZP_05184814.1| hypothetical protein BantA1_11204 [Bacillus anthracis str. A1055]
 gi|254738081|ref|ZP_05195784.1| hypothetical protein BantWNA_23219 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254742746|ref|ZP_05200431.1| hypothetical protein BantKB_17337 [Bacillus anthracis str. Kruger
           B]
 gi|254752397|ref|ZP_05204433.1| hypothetical protein BantV_08016 [Bacillus anthracis str. Vollum]
 gi|254760914|ref|ZP_05212938.1| hypothetical protein BantA9_21601 [Bacillus anthracis str.
           Australia 94]
 gi|30257660|gb|AAP26890.1| putative membrane protein [Bacillus anthracis str. Ames]
 gi|47551822|gb|AAT32190.2| putative membrane protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|167514963|gb|EDR90329.1| putative membrane protein [Bacillus anthracis str. A0193]
 gi|167532212|gb|EDR94848.1| putative membrane protein [Bacillus anthracis str. A0442]
 gi|170129832|gb|EDS98694.1| putative membrane protein [Bacillus anthracis str. A0389]
 gi|170670960|gb|EDT21698.1| putative membrane protein [Bacillus anthracis str. A0465]
 gi|172083988|gb|EDT69047.1| putative membrane protein [Bacillus anthracis str. A0174]
 gi|190564434|gb|EDV18398.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I]
 gi|227007262|gb|ACP17005.1| putative membrane protein [Bacillus anthracis str. CDC 684]
 gi|229266589|gb|ACQ48226.1| putative membrane protein [Bacillus anthracis str. A0248]
          Length = 300

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 90/263 (34%), Gaps = 23/263 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A         
Sbjct: 1   MQKLIVFAIIGFSAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE-------V 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H + G ++   +        I   V +  +S++    +    ++F   +G+
Sbjct: 53  VTTAASGASHLKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISLFLFTLGV 112

Query: 140 LMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            +L R     ++    K          G+  GF+    G G G  T  ++L  G    K 
Sbjct: 113 YILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLARGNEARKV 172

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             +       +A  A +    S GW            V+   V  ++   I+  P+A  L
Sbjct: 173 IGSVDTSEFPVALAATIGFFISLGWEQ----------VSWFWVFALMLGGIVAAPIAAWL 222

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             ++    L +    ++  T+  
Sbjct: 223 VRIVPSHLLGVLVGGLIIFTNIR 245


>gi|119855138|ref|YP_935743.1| hypothetical protein Mkms_5752 [Mycobacterium sp. KMS]
 gi|119697856|gb|ABL94928.1| protein of unknown function DUF81 [Mycobacterium sp. KMS]
          Length = 292

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 83/236 (35%), Gaps = 23/236 (9%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP+L+           +    A+ TSL V+  TS +  + H R G +   +   +  
Sbjct: 25  ILTVPLLAYV-------GGLETKQAIATSLLVVGVTSAVGAIAHVRAGRVRWGVALPFGG 77

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN---YVKYIW 162
                 +   L+   +  + L  AFA   +  G  ML+  +         +       + 
Sbjct: 78  AAMTGALGGGLVARFIPATVLLIAFAAIMIAAGGAMLRDRKNTIAADETRHVPVVAMAVL 137

Query: 163 GMVTGFLSGALGVGGGI-FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
           G+  G +SG +G GGG      L L  G  +  A  TS  V  + +F  L   + SG   
Sbjct: 138 GVAVGAVSGLVGAGGGFLLVPALALLAGLPMSGAVGTSLVVITMQSFAGLTGHLASGQ-- 195

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                     ++      +   + +   +  +L+  +    L   F   +   + V
Sbjct: 196 ----------IDWPMAATVTTAAAVGALVGGRLTGAVDPDALRRLFGWFVLLMASV 241



 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 49/142 (34%), Gaps = 7/142 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + V     G +SGL G GGG             + +   + M  A+GTSL VI   S
Sbjct: 131 VVAMAVLGVAVGAVSGLVGAGGGF-------LLVPALALLAGLPMSGAVGTSLVVITMQS 183

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                 H   G I+  +         +  +V   +   VD   L + F  F LLM  ++L
Sbjct: 184 FAGLTGHLASGQIDWPMAATVTTAAAVGALVGGRLTGAVDPDALRRLFGWFVLLMASVIL 243

Query: 143 KRDRLYCERKFPDNYVKYIWGM 164
            ++                 G 
Sbjct: 244 AQETTPAVGAASAAVTVIGAGT 265


>gi|239787713|emb|CAX84221.1| Magnetosome protein MamO [uncultured bacterium]
          Length = 654

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 84/261 (32%), Gaps = 49/261 (18%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
                G    +   VA  T++ V    S+ +     + G +    +K          V+ 
Sbjct: 402 MMAFFGYGMYLIRPVAFLTNVAVYGAASLRNS----KAGLVEWDKVKKLAPWGVAGVVLG 457

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKR------------------------------ 144
             + + +    +     +F + M +  +                                
Sbjct: 458 YFLGNAMGDGSIAILLGVFAMAMAMKAVHEVAYADRASGSKPDALDEFIGETDESARKNQ 517

Query: 145 -DRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFYGA-SIYKATATSAG 201
            D +      P+ +++    G+  G +SG LG+ GG+    L  + G  S+  A A S+ 
Sbjct: 518 ADEIKPAFDVPEGHLRSAVLGLPMGLVSGILGISGGVIEVPLQRYIGRTSLQNAIANSSV 577

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA----VLIILPISILITPLATKLSYM 257
           +    +    LV    G         S G ++  A     L+++P + +   L  +L   
Sbjct: 578 LVFWASVAGTLVSFSHGI--------SRGLIDWQAPIVLALLMIPGAYVGGILGARLMRA 629

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +    L   +++IM   +   
Sbjct: 630 LPVVTLKSIYAVIMAAIAVKM 650



 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 45/125 (36%), Gaps = 15/125 (12%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V     G +SG+ G+ GG++ VP+               +  A+  S  ++   SV   
Sbjct: 535 AVLGLPMGLVSGILGISGGVIEVPLQRYI-------GRTSLQNAIANSSVLVFWASVAGT 587

Query: 87  ---MEH-RRHGTINMK----ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                H    G I+ +    +    I    +  ++ + ++  +    L   +A+    + 
Sbjct: 588 LVSFSHGISRGLIDWQAPIVLALLMIPGAYVGGILGARLMRALPVVTLKSIYAVIMAAIA 647

Query: 139 ILMLK 143
           + ML 
Sbjct: 648 VKMLF 652


>gi|84393761|ref|ZP_00992509.1| hypothetical protein V12B01_06786 [Vibrio splendidus 12B01]
 gi|84375623|gb|EAP92522.1| hypothetical protein V12B01_06786 [Vibrio splendidus 12B01]
          Length = 259

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 87/266 (32%), Gaps = 28/266 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F +G +  + G GGG++ VP L            +  H+A+GT+      
Sbjct: 7   TMLVILALVAFAAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + R      +   +      I   + +L +  +   +L K   +  L   + 
Sbjct: 58  ASSTAAFTYYRKKLFKPECWTNAFISTLIGATIGTLTVDAISTEWLEKVLPLVILAAAVY 117

Query: 141 MLKRDRLYCERKFPDNYVKYIW------GMVTGFLSGALGVGGGIF-TNLLMLFYGASIY 193
            +                  +       G + GF  G  G G G F T   M  Y  +I 
Sbjct: 118 TIFHKTPDVSHNVSPKPCPVLKRKQKYQGFILGFYDGVAGPGTGAFWTVSSMALYRLNIL 177

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+  S  ++    F +L+                LG ++    L +    +    +   
Sbjct: 178 LASGLSKAMNFTSNFTSLVTFAI------------LGHIDWVLGLTMGLCLMAGAFVGAH 225

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +   G  ++   F  ++   +   A
Sbjct: 226 SAIRFGATFIRPVFVTVVSVLAIKLA 251


>gi|253574523|ref|ZP_04851864.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251846228|gb|EES74235.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 277

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/289 (16%), Positives = 106/289 (36%), Gaps = 48/289 (16%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +   +  I + + L+G +  + G+GGG+++ P L+  F        + ++ A+G S+  +
Sbjct: 1   MTTTVIEIFMIAILAGIVGSILGLGGGIIVTPALTLLF-------GVDINHAIGASIISV 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS  S + + R    N+++         +  +  + + + +   FL   FA+  L   
Sbjct: 54  IATSSGSAVAYIRDRITNLRVGMFLEIATTVGAITGAFIGALIAPRFLYIIFALLLLYSA 113

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWG----------------------------MVTGFLS 170
             M+K+ +       P + V    G                               G +S
Sbjct: 114 YAMIKKSKQEVPENVPLHPVAEKLGLQGEYYDKALGKTVAYNVDRVYEGFGVMYGAGVIS 173

Query: 171 GALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G LG+G G F  + M +F    +  ++ATS  +  + A  +  + +  G  +  +     
Sbjct: 174 GLLGIGSGSFKVMAMDVFMKMPLKVSSATSNFMMGVTAAASAGIYLLRGDIIPVIS---- 229

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                     +    ++   + ++L   +  K +   F  +M   +F  
Sbjct: 230 --------APVALGVLIGATVGSRLMQRMKSKTIRKLFIPVMVYVAFQM 270



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G +SGL G+G G       S     M +   + + V+  TS  ++  T+  S   +   
Sbjct: 169 AGVISGLLGIGSG-------SFKVMAMDVFMKMPLKVSSATSNFMMGVTAAASAGIYLLR 221

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           G I   I       + I   V S ++  +    + K F    + +   M+ +
Sbjct: 222 GDIIPVISAPVALGVLIGATVGSRLMQRMKSKTIRKLFIPVMVYVAFQMIYQ 273


>gi|291288821|ref|YP_003505637.1| hypothetical protein Dacet_2931 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885981|gb|ADD69681.1| protein of unknown function DUF81 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 274

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 51/233 (21%), Positives = 86/233 (36%), Gaps = 34/233 (14%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +++ ICL+ +  F+S  L+ L G+GGG ++VPVL   F          +H A+  SL V
Sbjct: 1   MIIELICLLAL-GFISAVLAYLLGIGGGALIVPVLVVFF-------GYPVHEAVAVSLVV 52

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +  +S+     +     +N+K+         +  V   L   ++ +  L+  FA    + 
Sbjct: 53  VVASSISITSVNLLKNMVNIKLALFLESAAILGAVGGGLASVNISEQVLSAVFAGIMAIT 112

Query: 138 GILMLKRDRLYCER-------------------------KFPDNYVKYIWGMVTGFLSGA 172
             +M K+  +                             K            + G  SG 
Sbjct: 113 AYIMWKKAEVDVSSVDIPLDMGEFDRDFMDAGRGELRFYKVEKPEQTMFIVFLAGITSGM 172

Query: 173 LGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
           LG+GGG+F    M +     I  ATATS  +    A    L  +  G+     
Sbjct: 173 LGLGGGVFKVPAMNVISRVPIKAATATSNFMICFTAAAGSLPYLMKGFFHPAA 225



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 48/118 (40%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +   FL+G  SG+ G+GGG+  VP ++           + +  A  TS  +I  T+    
Sbjct: 160 MFIVFLAGITSGMLGLGGGVFKVPAMNVI-------SRVPIKAATATSNFMICFTAAAGS 212

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +   G  +       +      +   +  ++ V+   +   F +F L + + M+ +
Sbjct: 213 LPYLMKGFFHPAAAGTMVLGAFAGSKFATGRLAKVESKSIKLLFILFLLFVAVQMVYK 270


>gi|226356007|ref|YP_002785747.1| hypothetical protein Deide_10970 [Deinococcus deserti VCD115]
 gi|226317997|gb|ACO45993.1| conserved hypothetical protein; putative membrane protein
           [Deinococcus deserti VCD115]
          Length = 250

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 80/203 (39%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +   +  +FL+G +  + G GGG + +P L            +    A+ T+  +   
Sbjct: 5   EVLLYGLPLAFLAGFIDAVAG-GGGTITLPTLFFM--------GLSPAQAVATNKLLAIF 55

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +++ R G ++  ++   I +    + + + ++  +D         I  L +G L
Sbjct: 56  GSGSATVQYWRKGHVDRDLVVRLIPLALAGSALGAYLVHFIDPDAFRTLVGIVILGVGAL 115

Query: 141 MLKRDRLYCERKFPDNYVKYIW-----GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +L   R   E +FP    + +        V G   G LG G G F   L    G ++ ++
Sbjct: 116 VLVNKRFGMEDRFPGLTTRVLALTLPGAFVIGLYDGFLGPGTGTFLMFLFALVGFNLVRS 175

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
           +  +  ++      A L  +  G
Sbjct: 176 SGNARTINFATNLGAFLFFLVGG 198


>gi|324327574|gb|ADY22834.1| permease [Bacillus thuringiensis serovar finitimus YBT-020]
          Length = 251

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 86/219 (39%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         + + + S + S +   
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGALGSYIGSKIGSLIPGH 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFP-----------DNYVKYIWGMVTGFLSGAL 173
            L+   A    L  I M  +   +  R+             +       G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGMMAGSF 154

Query: 174 GVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G        LM   G +I ++  T+  V   IA    L               S G++
Sbjct: 155 GIGSAPFIQLGLMGLLGLTIQQSVGTTMLVILPIAIGGGLGYS------------SEGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 203 DYILLLQVLIGTMLGAYIGAKFTNYAPRMLLK--FSMIM 239



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 50/129 (38%), Gaps = 13/129 (10%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           KD   + I   I    ++G ++G FG+G               +     + +  ++GT++
Sbjct: 130 KDFSKENIMKCICLGLVTGMMAGSFGIGSA-------PFIQLGLMGLLGLTIQQSVGTTM 182

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK------A 129
            VI P ++   + +   G ++  +L   +    +   + +   ++  +  L         
Sbjct: 183 LVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLKFSMIMTPV 242

Query: 130 FAIFCLLMG 138
           FA   LLMG
Sbjct: 243 FAGCMLLMG 251


>gi|307571934|emb|CAR85113.1| membrane protein, putative [Listeria monocytogenes L99]
          Length = 301

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 86/258 (33%), Gaps = 48/258 (18%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+  F        I +  A+G S+  +  TS  S + + + G  N+++         I
Sbjct: 55  PALTLIF-------GIDIQYAIGASIISVIATSSGSAIAYIKDGITNLRVGMFLEIATTI 107

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR------------------------- 144
             +  + +   +  + L   F +  L     M+K+                         
Sbjct: 108 GAITGAFVSGLLSATALYIIFGLLLLYSAFNMIKKVGTEFPTNVKPDPLATKLNLHDSYY 167

Query: 145 ---DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA 200
               R   + +  +    +      G  SG LG+G G F  + + +F    +  ++ATS 
Sbjct: 168 DKSLRQTVDYQVANVPAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSATSN 227

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  + A  +  V ++ G     +               +    ++   L T++   +  
Sbjct: 228 LMMGVTAAASATVYLFQGDIQPAI------------AAPVAIGVLVGATLGTRIMQRLKS 275

Query: 261 KYLTIGFSMIMFTTSFVF 278
           K + I F  ++   +F  
Sbjct: 276 KVIRIIFIPVILYVAFQM 293



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  SGL G+G G   V         + +   + + V+  TS  ++  T+  S   +   
Sbjct: 192 AGIASGLLGIGSGAFKV-------MALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQ 244

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           G I   I       + +   + + ++  +    +   F    L +   M+ 
Sbjct: 245 GDIQPAIAAPVAIGVLVGATLGTRIMQRLKSKVIRIIFIPVILYVAFQMIL 295


>gi|296119361|ref|ZP_06837928.1| putative integral membrane protein [Corynebacterium ammoniagenes
           DSM 20306]
 gi|295967646|gb|EFG80904.1| putative integral membrane protein [Corynebacterium ammoniagenes
           DSM 20306]
          Length = 216

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 59/120 (49%), Gaps = 7/120 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I+   + G ++GL G GGG ++VP L+           + M VA+GTSL VI   S   
Sbjct: 66  VILDGLVVGVITGLVGAGGGFLVVPALALL-------GGLSMPVAVGTSLVVITMKSFAG 118

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +     ++  ++        + +++ S +   + ++ L K F +F L+MG+ +L ++
Sbjct: 119 LAGYLTSVELDWALVGAVTVAAILGSLLGSRLAGRIPEALLRKGFGVFVLVMGVFVLIQE 178



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 63/161 (39%), Gaps = 18/161 (11%)

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCE----RKFPDNYVKYIWGMVTGFLSGALGV 175
           H+    L  AFA+  +   I M++  +        R  P   V  + G+V G ++G +G 
Sbjct: 24  HIPSVVLMVAFALMMIATSIAMIRGRKGSAGEVKDRDLPLGRV-ILDGLVVGVITGLVGA 82

Query: 176 GGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           GGG      +    G S+  A  TS  V  + +F  L   + S              ++ 
Sbjct: 83  GGGFLVVPALALLGGLSMPVAVGTSLVVITMKSFAGLAGYLTSVE------------LDW 130

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             V  +   +IL + L ++L+  I +  L  GF + +    
Sbjct: 131 ALVGAVTVAAILGSLLGSRLAGRIPEALLRKGFGVFVLVMG 171


>gi|159184343|ref|NP_353526.2| hypothetical protein Atu0498 [Agrobacterium tumefaciens str. C58]
 gi|159139659|gb|AAK86311.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 308

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 50/286 (17%), Positives = 97/286 (33%), Gaps = 56/286 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + V+L    +   I +I+      G LSG+FGVGGG ++ P+L           +I   V
Sbjct: 1   MTVYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPVV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    +  +SV   + H R GT+++K+    +    +   V   + S +        
Sbjct: 53  AVATGANQVVASSVSGSITHFRRGTLDIKLGTVLLVGGLVGATVGVWIFSFLRSIGQLDL 112

Query: 125 FLNKAFAIFCLLMGILMLK-------------------------------RDRLYCERKF 153
            ++  + I    +G LMLK                               + R    + +
Sbjct: 113 IVSLLYVILLGTVGTLMLKESISALRRAARNETVTLRRPGHHNWVHRLPLKMRFKKSKIY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G   G L+  +GVGGG      M++           TS      +     +
Sbjct: 173 LSIIPIVALGFGIGILTSIMGVGGGFIMVPAMIYLLRIPTSVVVGTSLFQIIFVTAYTTV 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           V+  + +            V++    I++   ++      ++   +
Sbjct: 233 VQAATNYS-----------VDVVLAFILMVAGVIGAQYGVRVGQKL 267



 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 50/124 (40%), Gaps = 8/124 (6%)

Query: 2   YDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI 61
           ++ ++   L +   K  +   I  I+   F  G L+ + GVGGG +MVP +    +    
Sbjct: 154 HNWVHRLPLKMRFKKSKIYLSIIPIVALGFGIGILTSIMGVGGGFIMVPAMIYLLR---- 209

Query: 62  DDSICMHVAMGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
              I   V +GTSL  I   T+  + ++   + ++++ +    +    I       +   
Sbjct: 210 ---IPTSVVVGTSLFQIIFVTAYTTVVQAATNYSVDVVLAFILMVAGVIGAQYGVRVGQK 266

Query: 121 VDKS 124
           +   
Sbjct: 267 LRGE 270


>gi|70725419|ref|YP_252333.1| hypothetical protein SH0418 [Staphylococcus haemolyticus JCSC1435]
 gi|68446143|dbj|BAE03727.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 289

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +A FL+  + G  G+G G       S      GI  +I       T       T+
Sbjct: 4   LFIFALAGFLAQLVDGSLGMGFGA----SSSSILLTYGIAPAIV----SATVHFSEIATT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H +   ++   +        I+  + + +++ +   ++    A+F L MGI +L
Sbjct: 56  AASGTSHWKFENVHKPTMLKLAIPGAISGFIGAGLLTQIHGDYIKPYIALFLLSMGIYIL 115

Query: 143 KRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKA 195
            +      R+          +     G + GFL    G G G     L+L  +      A
Sbjct: 116 YQFLFKRNREIHTHVGKLSGFKLVPQGAIAGFLDAIGGGGWGPVNTPLLLASHKIQPRYA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T +     +     L  I             +  +N   V+ +    ++  P++  L+
Sbjct: 176 IGTVSASEFFVTLSTSLSFIIF---------LGITQINWWFVIALSVGGMIAAPISAYLT 226

Query: 256 YMIGKKYLTIGFSMIMFTT 274
            ++    L I    ++  T
Sbjct: 227 KILPINILAICVGGLIIFT 245


>gi|323497698|ref|ZP_08102714.1| hypothetical protein VISI1226_13631 [Vibrio sinaloensis DSM 21326]
 gi|323317281|gb|EGA70276.1| hypothetical protein VISI1226_13631 [Vibrio sinaloensis DSM 21326]
          Length = 259

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 94/264 (35%), Gaps = 28/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++ + +F +G +  + G GGG++ VP L            +  H+A+GT+       S
Sbjct: 9   LLVLALVAFAAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATFAS 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R      +  K       I   + +L +  +   +L K   +  L   I  +
Sbjct: 60  STAAFTYYRKRLFKPRCWKRAFVSTLIGATLGTLFVDLISTEWLEKVLPLIILAAAIYTI 119

Query: 143 KRDRLYCER-KFPD-----NYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
                   + + P      N  +Y  G++ GF  G  G G G F T   M  Y  +I  A
Sbjct: 120 WHKTPNANKNEMPQPCPVLNKKQYAQGLILGFYDGVAGPGTGAFWTASSMALYRLNILLA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  S  ++    F +L+                LG ++    L +    +    +    +
Sbjct: 180 SGLSKAMNFTSNFTSLVTFAV------------LGHIDWLLGLTMGLCLMAGAFVGAHSA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 IRFGAKFIRPVFVTVVSILAVKLA 251


>gi|284802846|ref|YP_003414711.1| hypothetical protein LM5578_2603 [Listeria monocytogenes 08-5578]
 gi|284995987|ref|YP_003417755.1| hypothetical protein LM5923_2552 [Listeria monocytogenes 08-5923]
 gi|284058408|gb|ADB69349.1| hypothetical protein LM5578_2603 [Listeria monocytogenes 08-5578]
 gi|284061454|gb|ADB72393.1| hypothetical protein LM5923_2552 [Listeria monocytogenes 08-5923]
          Length = 301

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 86/258 (33%), Gaps = 48/258 (18%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+  F        I +  A+G S+  +  TS  S + + + G  N+++         I
Sbjct: 55  PALTLIF-------GIDIQYAIGASIISVIATSSGSAIAYIKDGITNLRVGMFLEIATTI 107

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR------------------------- 144
             +  + +   +  + L   F +  L     M+K+                         
Sbjct: 108 GAITGAFVSGLLSATALYIIFGLLLLYSAFNMIKKVGSEFPTNVKPDPLATKLNLHDSYY 167

Query: 145 ---DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA 200
               R   + +  +    +      G  SG LG+G G F  + + +F    +  ++ATS 
Sbjct: 168 DKSLRQTVDYQVANVPAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSATSN 227

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  + A  +  V ++ G     +               +    ++   L T++   +  
Sbjct: 228 LMMGVTAAASATVYLFQGDIQPAI------------AAPVAIGVLVGATLGTRIMQRLKS 275

Query: 261 KYLTIGFSMIMFTTSFVF 278
           K + I F  ++   +F  
Sbjct: 276 KVIRIIFIPVILYVAFQM 293



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  SGL G+G G   V         + +   + + V+  TS  ++  T+  S   +   
Sbjct: 192 AGIASGLLGIGSGAFKV-------MALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQ 244

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           G I   I       + +   + + ++  +    +   F    L +   M+ 
Sbjct: 245 GDIQPAIAAPVAIGVLVGATLGTRIMQRLKSKVIRIIFIPVILYVAFQMIL 295


>gi|269103108|ref|ZP_06155805.1| hypothetical protein VDA_002534 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163006|gb|EEZ41502.1| hypothetical protein VDA_002534 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 257

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 93/264 (35%), Gaps = 28/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++   + ++G +  + G GGG++ VP L            +  H+A+GT+       S
Sbjct: 10  LAILGGVALVAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATFAS 60

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R    +    K       I  V+ +L+++ +   +L KA  +  L   I  +
Sbjct: 61  STAAWTYYRKLLFSPSFWKKSFIATFIGAVIGTLVVNQISTMWLEKALPLIILAAAIYTI 120

Query: 143 KRDRLYCERKFPDNYV------KYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
                   ++            +++ G   GF  G  G G G F T   M  Y   I  A
Sbjct: 121 WHPHPKTAQQSLPQVSASLYRKQWLQGSSLGFYDGLAGPGTGAFWTVSSMALYRLDILLA 180

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++      +L+                LG +N    L +    ++   +    +
Sbjct: 181 SGLAKAMNFTSNMTSLVTFAI------------LGHINFALGLTMGLCLMVGAYIGAHSA 228

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 229 IRFGAKFIRPIFITVVMILAIKLA 252


>gi|308187639|ref|YP_003931770.1| Inner membrane protein yfcA [Pantoea vagans C9-1]
 gi|308058149|gb|ADO10321.1| Inner membrane protein yfcA [Pantoea vagans C9-1]
          Length = 267

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 95/237 (40%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + L+ + + L+G +  + G GGGL+ VP L  A         +    A+ T+       
Sbjct: 10  LVGLLFLIAMLAGFIDSIAG-GGGLLTVPSLLAA--------GLSPAQALATNKLQSVGG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + +   R G +N+      I +  + +++ +++I  +   FL +   +F + +G+  
Sbjct: 61  SFSASLYFVRRGAVNLNEQWLNIAMTLLGSILGAILIQRLQADFLRQMLPLFLIAIGLWF 120

Query: 142 LKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L      R+        + G   GF  G  G G G F  L  +   G ++ KATA
Sbjct: 121 LLMPKLGEVDQARRLHGLPYALVGGGAVGFYDGFFGPGAGSFYALAFVTLCGYNLAKATA 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++      +LL  ++ G             V  G  LI++  +     L  +L
Sbjct: 181 HAKVLNFTSNMGSLLFFMFGGK------------VVWGTGLIMMLGAFCGARLGARL 225



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 13/121 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           + ++  M+ GF+    G GGG+ T   +L  G S  +A AT+   S   +F A L  +  
Sbjct: 13  LLFLIAMLAGFIDSIAG-GGGLLTVPSLLAAGLSPAQALATNKLQSVGGSFSASLYFVRR 71

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                       G VN+    + + +++L + L   L   +   +L     + +      
Sbjct: 72  ------------GAVNLNEQWLNIAMTLLGSILGAILIQRLQADFLRQMLPLFLIAIGLW 119

Query: 278 F 278
           F
Sbjct: 120 F 120


>gi|290968879|ref|ZP_06560416.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L]
 gi|290781175|gb|EFD93766.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L]
          Length = 259

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 93/261 (35%), Gaps = 26/261 (9%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  +S    +  I  I++  F++G +  + G GGGL+ +P+L  A         +  H+A
Sbjct: 1   MDIMSASSGIQTIFFIMIGGFMAGFVDSIAG-GGGLISLPILLAA--------GMTPHLA 51

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+       + MS  +  R G  +M +L+  I    +  V   +++ ++   +L    
Sbjct: 52  LGTNKFSATFGACMSARQFIRAGKTDMSLLRRLIPCSFLGAVAGCVLMLYISAKWLQPII 111

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIW-----GMVTGFLSGALGVGGGIFTNLLM 185
            I  +     +  R  L     +       +        V G   G +G G G F  +  
Sbjct: 112 IIALIGSAFFVFFRRHLGAAMTYSGESRTVLIKSSLMAFVLGMYDGFIGPGTGTFLIVFF 171

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
              G     A   +  ++ +    + ++ +  G             V     +++     
Sbjct: 172 AMLGFDFVLAAGNAKVLNLISNLTSFVIFVACGK------------VYYVYGILMAVCIF 219

Query: 246 LITPLATKLSYMIGKKYLTIG 266
           L      +L+   G +++   
Sbjct: 220 LGAFFGARLAIRKGIRFVRYV 240


>gi|86356207|ref|YP_468099.1| putative permease protein [Rhizobium etli CFN 42]
 gi|86280309|gb|ABC89372.1| putative permease protein [Rhizobium etli CFN 42]
          Length = 307

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 98/292 (33%), Gaps = 56/292 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   I +I+      G LSG+FGVGGG ++ P+L           +I   V
Sbjct: 1   MTIYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPVV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    +  +S+   + H R GT+++K+    +        V   + S +        
Sbjct: 53  AVATGANQVVASSISGAITHFRRGTLDIKLGTVLLVGGLSGATVGIWIFSLLRAIGQLDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            ++  + IF   +G LML                                + R    + F
Sbjct: 113 IISLMYVIFLGTVGGLMLLESIKAMRRAARNEPPVPRKPGHQHWVHKLPLKVRFKKSKIF 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G   G L+  +GVGGG      M++           TS      +     +
Sbjct: 173 LSVIPIVALGFAIGILTSIMGVGGGFIMVPAMIYLLRIPTNVVVGTSLYQIIFVTAYTTI 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           V+  + +            V+I    I++   ++      ++   +  + L 
Sbjct: 233 VQAATNFS-----------VDIVLAFILMVAGVVGAQYGVRVGQKLRGEQLR 273



 Score = 42.0 bits (98), Expect = 0.087,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 50/124 (40%), Gaps = 8/124 (6%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           ++   L V   K  +   +  I+   F  G L+ + GVGGG +MVP +    +       
Sbjct: 157 VHKLPLKVRFKKSKIFLSVIPIVALGFAIGILTSIMGVGGGFIMVPAMIYLLR------- 209

Query: 65  ICMHVAMGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           I  +V +GTSL  I   T+  + ++   + ++++ +    +    +       +   +  
Sbjct: 210 IPTNVVVGTSLYQIIFVTAYTTIVQAATNFSVDIVLAFILMVAGVVGAQYGVRVGQKLRG 269

Query: 124 SFLN 127
             L 
Sbjct: 270 EQLR 273


>gi|299770331|ref|YP_003732357.1| hypothetical protein AOLE_10475 [Acinetobacter sp. DR1]
 gi|298700419|gb|ADI90984.1| hypothetical protein AOLE_10475 [Acinetobacter sp. DR1]
          Length = 295

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 93/278 (33%), Gaps = 44/278 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  L G   G+ GVGGG +M P+L   F+       I  H+A+GT L   A +    
Sbjct: 7   FILAGMLVGFCVGITGVGGGSLMTPILIGLFR-------IEPHIAIGTDLLYAAISKFCG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
            M H R   I   I+          +  T+ ++ H           L         L G+
Sbjct: 60  SMVHARKLNIVWPIVLWLAVGSIPASFGTTWILEHYLSQSTHYKAVLTMVLGFMLTLTGV 119

Query: 140 LMLKRDRLYCERK-----------------FPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++ R R+                              + G++ G       VG G F  
Sbjct: 120 SIIFRSRIEKFFSRFRSKEVTQTETEHLAIHKKRSFIVVMGIILGVFVTLSSVGAGAFGI 179

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
           + ++       + +   +    + L+              + GL   S G V+   ++ +
Sbjct: 180 MALVIMFPNLPMIRIIGSDVVHAVLLTL------------VAGLGHMSAGNVDFTLLMWL 227

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L  SI    + T +S  + ++ +     + +F     F
Sbjct: 228 LVGSIPAIIVGTLISSRMPERLIRKILGITLFALGVNF 265



 Score = 38.5 bits (89), Expect = 0.97,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 49/130 (37%), Gaps = 7/130 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            I+V   + G    L  VG G   +  L   F       ++ M   +G+ +      +++
Sbjct: 155 FIVVMGIILGVFVTLSSVGAGAFGIMALVIMF------PNLPMIRIIGSDVVHAVLLTLV 208

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-MLK 143
           + + H   G ++  +L   +       +V +L+ S + +  + K   I    +G+  M+ 
Sbjct: 209 AGLGHMSAGNVDFTLLMWLLVGSIPAIIVGTLISSRMPERLIRKILGITLFALGVNFMVH 268

Query: 144 RDRLYCERKF 153
             +   +   
Sbjct: 269 PVKAKPKAPV 278


>gi|317124043|ref|YP_004098155.1| hypothetical protein Intca_0901 [Intrasporangium calvum DSM 43043]
 gi|315588131|gb|ADU47428.1| protein of unknown function DUF81 [Intrasporangium calvum DSM
           43043]
          Length = 243

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 81/232 (34%), Gaps = 20/232 (8%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           G+ GVG G+++ P L            +  + A  TS      T V+  + +   G +  
Sbjct: 17  GMVGVG-GVLLPPGLVAL-------GDLTANEATATSTWAFVFTGVVGTVAYAWRGVVPW 68

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY 157
            +L      +     + +L+ + +  S +    A   L +G+  L+   +   R+     
Sbjct: 69  GMLAGLTVGVAPAAFLGALINARLPASVVLLGLAALTLFVGVQQLRPRAVRGTREGLGAA 128

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
                G   GF S   G GG +    ++L  G +  +A A S  V   +     +  +  
Sbjct: 129 ALVALGAFVGFGSALTGTGGPVLLVPMLLTLGVAPLRAVAVSQAVQLPVVVAGSVGYL-- 186

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
                 L    LG V       +  ++ L     + ++  I  + L    ++
Sbjct: 187 ---QTDLVDIRLGTV-------LGCLAALGVAAGSVVATRIPAEGLRRIVAV 228



 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 46/113 (40%), Gaps = 8/113 (7%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
             G  S L G GG +++VP+L            +    A+  S  V  P  V   + + +
Sbjct: 136 FVGFGSALTGTGGPVLLVPMLLTL--------GVAPLRAVAVSQAVQLPVVVAGSVGYLQ 187

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              +++++      +  +     S++ + +    L +  A+ CL  G+ ++ R
Sbjct: 188 TDLVDIRLGTVLGCLAALGVAAGSVVATRIPAEGLRRIVAVACLAAGVFLVVR 240


>gi|15964290|ref|NP_384643.1| hypothetical protein SMc02232 [Sinorhizobium meliloti 1021]
 gi|307307026|ref|ZP_07586765.1| protein of unknown function DUF81 [Sinorhizobium meliloti BL225C]
 gi|307320680|ref|ZP_07600093.1| protein of unknown function DUF81 [Sinorhizobium meliloti AK83]
 gi|15073467|emb|CAC45109.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
 gi|306893715|gb|EFN24488.1| protein of unknown function DUF81 [Sinorhizobium meliloti AK83]
 gi|306901966|gb|EFN32565.1| protein of unknown function DUF81 [Sinorhizobium meliloti BL225C]
          Length = 308

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/286 (16%), Positives = 98/286 (34%), Gaps = 56/286 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + V+L    +   I +I+      G LSG+FGVGGG ++ P+L           +I   V
Sbjct: 1   MTVYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPVV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    +  +S+   + H R GTI++K+    +    +   V   + S +        
Sbjct: 53  AVATGANQVVASSISGAIAHFRRGTIDIKLGTVLLCGGLVGATVGVWLFSLLRSIGQLDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            ++  + +    +G LML                                + R    + +
Sbjct: 113 VISLLYVVLLGSVGALMLWESIGAMRKAAKNQPAQLRRPGQHNWIHGLPLKMRFKKSKIY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G   G L+  +GVGGG      M++           TS      ++   ++
Sbjct: 173 LSVIPVATLGFSIGVLTSVMGVGGGFIMVPAMIYLLRIPTSVVVGTSLFQIVFVSAYTVI 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           V+  + +            V+I    +++   ++      ++   +
Sbjct: 233 VQASTNYT-----------VDIVLAFVLMIAGVIGAQYGVRVGQRL 267


>gi|163738959|ref|ZP_02146372.1| membrane protein [Phaeobacter gallaeciensis BS107]
 gi|161387764|gb|EDQ12120.1| membrane protein [Phaeobacter gallaeciensis BS107]
          Length = 307

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 109/305 (35%), Gaps = 56/305 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    V     L++    + G LSG+FGVGGG +M P+L       GI  +    V
Sbjct: 1   MQIYLPIAEVSVNAFLLLGLGGMVGILSGMFGVGGGFLMTPLLFFI----GIPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    I  +S    + H R  T+++K+         +   +  ++ +++        
Sbjct: 53  AVATEANQIVASSFSGVLAHFRRRTVDIKMGLVLQAGGLLGAALGVVVFNYLKALGQVDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            +   + +F  ++G LM                                 + R      +
Sbjct: 113 LVKLCYVVFLGVVGGLMFVESLNAIRKSKASAGAAPAPRRQRGWVHALPFKMRFRTSGLY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                  + G+V G L+  +GVGGG      M++  G        TS     L+     +
Sbjct: 173 ISVIPPLLVGVVVGILAAIMGVGGGFIMVPAMIYILGMPTKVVVGTSLFQIILVTAFTTM 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           +   + +            V+I   +++L   ++   + T++   +  + L I  ++++ 
Sbjct: 233 LHATTNYT-----------VDIVLAVLLLVGGVIGAQIGTRIGVYLKAEQLRILLALMVI 281

Query: 273 TTSFV 277
                
Sbjct: 282 VVCVK 286



 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 50/126 (39%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L+ + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 179 LLVGVVVGILAAIMGVGGGFIMVPAMIYIL-------GMPTKVVVGTSLFQIILVTAFTT 231

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H     T+++ +    +    I   + + +  ++    L    A+  +++ + +    
Sbjct: 232 MLHATTNYTVDIVLAVLLLVGGVIGAQIGTRIGVYLKAEQLRILLALMVIVVCVKLGLDL 291

Query: 146 RLYCER 151
            L    
Sbjct: 292 LLMPSE 297


>gi|229541295|ref|ZP_04430355.1| protein of unknown function DUF81 [Bacillus coagulans 36D1]
 gi|229325715|gb|EEN91390.1| protein of unknown function DUF81 [Bacillus coagulans 36D1]
          Length = 250

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 86/230 (37%), Gaps = 22/230 (9%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            L+ I   + +H A+ T+L  +  +S    + H R G +++K       +        S 
Sbjct: 29  SLLTILFGVSIHTALATALTAMIFSSFSGAVSHYREGNVSIKAGITTGIIGAAGAWAGSH 88

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY---------IWGMVTG 167
           + +H+    L    A   +    L+  R  L  ++      + +         + G+VTG
Sbjct: 89  VSAHIASGELKWLTAGMLMFSAFLLWLRMFLLQKQSIQAKTLPFGPRFVTRSLLLGIVTG 148

Query: 168 FLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
            LSG  G+G   F  L LM+  G S+ +A  T+  V   IA               GL  
Sbjct: 149 ALSGMFGIGSTPFIQLGLMILLGLSVRQAAGTTMMVIIPIAIGG------------GLAS 196

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           +  G +++G ++ ++  ++    +  K +       L      +    S 
Sbjct: 197 FQQGTLDLGLLVEVVIGTMSGAYIGAKFTNRAPVSLLKSSMIAVPIVASL 246



 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 52/122 (42%), Gaps = 7/122 (5%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++   ++   ++G LSG+FG+G    +   L            + +  A GT++ VI P 
Sbjct: 136 FVTRSLLLGIVTGALSGMFGIGSTPFIQLGLMILL-------GLSVRQAAGTTMMVIIPI 188

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++   +   + GT+++ +L + +        + +   +    S L  +     ++  +L+
Sbjct: 189 AIGGGLASFQQGTLDLGLLVEVVIGTMSGAYIGAKFTNRAPVSLLKSSMIAVPIVASLLL 248

Query: 142 LK 143
           + 
Sbjct: 249 IL 250


>gi|300856495|ref|YP_003781479.1| putative permease [Clostridium ljungdahlii DSM 13528]
 gi|300436610|gb|ADK16377.1| putative permease [Clostridium ljungdahlii DSM 13528]
          Length = 278

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 98/279 (35%), Gaps = 48/279 (17%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I+  S ++G    + G+GGG V+ P L+  F        I +  A+G SL  +  TS  +
Sbjct: 8   ILSVSVIAGIAGSILGLGGGTVITPALTLLF-------GIDIKYAIGASLISVIATSSGA 60

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              + +    N+++         I  V  + +   ++  +L   F +  L   + M K+ 
Sbjct: 61  AAAYIKDKITNLRVGMFLEIATTIGAVTGAFLGGIINPKYLYFLFGLLLLYSALAMAKKG 120

Query: 146 RLYCER-----------KFPDNYVKYIWG-----------------MVTGFLSGALGVGG 177
           +    +           K    Y   I G                    G +SG LG+G 
Sbjct: 121 KSELPQGVQTHPLAKKLKLNGEYYDKIVGETVCYNVANVPSGFGVMYGAGIISGLLGIGS 180

Query: 178 GIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G F  + M LF    +  ++ATS  +  + A  +  V +  G             ++   
Sbjct: 181 GSFKVMAMDLFMKLPLKVSSATSNFMMGVTAAASAGVYLLRGNIDPK--------ISAPV 232

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            L +L        + T++   +  K +   F   +   S
Sbjct: 233 ALGVLAG----ATMGTRIMQNMKSKTIRKIFVPFLIYIS 267



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G +SGL G+G G       S     M +   + + V+  TS  ++  T+  S   +   
Sbjct: 169 AGIISGLLGIGSG-------SFKVMAMDLFMKLPLKVSSATSNFMMGVTAAASAGVYLLR 221

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           G I+ KI       +     + + ++ ++    + K F  F + + + M+ +
Sbjct: 222 GNIDPKISAPVALGVLAGATMGTRIMQNMKSKTIRKIFVPFLIYISVEMVLK 273


>gi|65320945|ref|ZP_00393904.1| COG0730: Predicted permeases [Bacillus anthracis str. A2012]
 gi|227813496|ref|YP_002813505.1| permease [Bacillus anthracis str. CDC 684]
 gi|227006710|gb|ACP16453.1| permease [Bacillus anthracis str. CDC 684]
          Length = 227

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 12/167 (7%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I           + + S + S +   
Sbjct: 51  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSLIPPY 110

Query: 125 FLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYI----------WGMVTGFLSGAL 173
            L+   A    L  I M +K  +   E +     +K I           G+VTG ++G+ 
Sbjct: 111 LLHWFTAGMLFLSAIFMCIKLIKFQNEEEVRLVKIKDISKENIMKCICLGLVTGMMTGSF 170

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           G+G   F  L LM+  G +I ++  T+  V   IA    L     G+
Sbjct: 171 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGY 217


>gi|261340720|ref|ZP_05968578.1| inner membrane protein YfcA [Enterobacter cancerogenus ATCC 35316]
 gi|288317137|gb|EFC56075.1| inner membrane protein YfcA [Enterobacter cancerogenus ATCC 35316]
          Length = 269

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  L G GGGL+ VP L       G+  +     A+ T+       
Sbjct: 14  LLAVLFFVAMLAGFIDALAG-GGGLLTVPALL----AAGMSPAQ----ALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +N+   K  I +  I +   +L++ HV    L +   I  + +G+  
Sbjct: 65  SLSASLYFIRRKVVNLADQKLNIAMTFIGSTAGALLVQHVQSDILRQILPILVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G G G F  L  +   G ++ K+TA
Sbjct: 125 LLMPKLGEEDRQRRLHGLPFALIAGGCVGFYDGFFGPGAGSFYALAFVTLAGFNLAKSTA 184

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++A      LL+ I  G  +     W+ GFV       ++    L     ++L
Sbjct: 185 HAKVLNATSNVGGLLLFIIGGKVI-----WATGFV-------MMVGQFLGARAGSRL 229


>gi|152984238|ref|YP_001347054.1| hypothetical protein PSPA7_1670 [Pseudomonas aeruginosa PA7]
 gi|150959396|gb|ABR81421.1| membrane protein, putative [Pseudomonas aeruginosa PA7]
          Length = 250

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 80/212 (37%), Gaps = 14/212 (6%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+G SLG +A ++++  +   R G +  + +         +  V   +   V +  L  A
Sbjct: 44  AIGVSLGAVALSALIGAIPRARQGQVAWRPVLILALAGLPSNAVGQWLGRFVPEGVLIVA 103

Query: 130 FAIFCLLMGILMLKRDRLY-CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F +  L     M +   +         N      G+  G LSG +GVGGG      +L++
Sbjct: 104 FCLLVLWSAWRMWRGAGMKREASDQARNLPLLGIGLAVGLLSGLMGVGGGFLVVPGLLWF 163

Query: 189 G-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
              S+  ATATS  V AL++    L+ +        L            +  +     + 
Sbjct: 164 TPLSMMAATATSMAVIALVSGGGFLIYLTGAHPPLPL------------LGGLAAGGAVG 211

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                 L+  +G   L   F++++   SF  A
Sbjct: 212 VLGGNLLAQRLGGPTLQRLFALMLVAVSFSLA 243



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++      G LSGL GVGGG ++VP L     L        M  A  TS+ VIA  S   
Sbjct: 134 LLGIGLAVGLLSGLMGVGGGFLVVPGLLWFTPL-------SMMAATATSMAVIALVSGGG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           F+ +       + +L        +  +  +L+   +    L + FA+  + +  
Sbjct: 187 FLIYLTGAHPPLPLLGGLAAGGAVGVLGGNLLAQRLGGPTLQRLFALMLVAVSF 240


>gi|330445722|ref|ZP_08309374.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489913|dbj|GAA03871.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 259

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 93/242 (38%), Gaps = 25/242 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  ++   L+   + L+G +  + G GGGL+ VP L       GI  +      + T+  
Sbjct: 2   ELSLEIFVLLFFVAGLAGFIDAIAG-GGGLLTVPALLSV----GIPPAQV----LATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  S  + +   R+G + +  ++  I    I + + +L++ H+D   L     +  + 
Sbjct: 53  QSSFGSFSASLYFVRNGLVKLSEMRLAIVCTFIGSALGALLVQHIDAGILTSLIPVLLIF 112

Query: 137 MGILMLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           + +  L      +   E K  +    +  G   GF  G  G G G    +  +      +
Sbjct: 113 VSLYFLLSPNVGKPQGEPKLSEAMFAFAVGTSIGFYDGFFGPGTGSLFTICFVAIAKFGL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++      AL+  I +G     LP W LG       L++     +   L  
Sbjct: 173 VEATARTKVLNFTSNIAALIFFIIAG-----LPLWKLG-------LVMAAGGFIGARLGA 220

Query: 253 KL 254
            +
Sbjct: 221 HI 222


>gi|301169525|emb|CBW29126.1| predicted permease [Haemophilus influenzae 10810]
          Length = 269

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 99/264 (37%), Gaps = 12/264 (4%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I ++++    +  +S +FG+GGG++MVP+L   F       ++ + V   TSL V+  
Sbjct: 4   STIFILLICGICTNMVSAIFGIGGGVLMVPILRTLF------PALPIQVISATSLTVVMC 57

Query: 81  TSVMSF-MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           T++++    H++   I+   +  W   + I   +   +  +   + ++  F +    + I
Sbjct: 58  TALINLLFFHKQKIKIDYINMILWSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAI 117

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTG-----FLSGALGVGGGIFTNLLMLFYGASIYK 194
                           + ++   G ++              GG I   L+    G    +
Sbjct: 118 KTFLNRSRTQIEVANMSPIERAKGSISCCGGGLIAGITGIGGGSILAPLVGQLKGVKTQQ 177

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
               +  +  +     L   +   +  +      LG+VN   V ++   S +++  + KL
Sbjct: 178 IAVYTNYMMIIGGIGNLYGYLTRVFPYDVSLSGQLGYVNFLVVGVVTLGSFVMSFFSMKL 237

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
             ++         ++I+F  +   
Sbjct: 238 RGLMNPALTRKLLAIILFCIAAYM 261


>gi|296104013|ref|YP_003614159.1| hypothetical protein ECL_03676 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295058472|gb|ADF63210.1| hypothetical protein ECL_03676 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 270

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 96/237 (40%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  L G GGGL+ VP L       G+  +     A+ T+       
Sbjct: 14  LLVVLFFVAMLAGFIDALAG-GGGLLTVPALL----AAGMSPAQ----ALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +N+   K  I +  I +   +L++ HV    L +   +  + +G+  
Sbjct: 65  SLSASLYFIRRKVVNLADQKLNILMTFIGSTSGALLVQHVQSDILRQILPVLVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G G G F  L  +   G ++ K+TA
Sbjct: 125 LLMPKLGEEDRQRRLHGLPFALIAGGCVGFYDGFFGPGAGSFYALAFVTLAGFNLAKSTA 184

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++A      LL+ I  G  +     W+ GFV       ++    L     ++L
Sbjct: 185 HAKVLNATSNVGGLLLFIIGGKVI-----WATGFV-------MMAGQFLGARAGSRL 229


>gi|193084351|gb|ACF10008.1| hypothetical protein [uncultured marine crenarchaeote
           SAT1000-49-D2]
          Length = 252

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 67/174 (38%), Gaps = 12/174 (6%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL+     MG   +    +A+  SL  +   SV S   + R   I + +      +  
Sbjct: 30  VPVLTF----MGFSPT----LAVSNSLFAVFSNSVASTTMYARQKRIELSLGWKLGLMAV 81

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK---YIWGMV 165
             T++ + + S +        FA+  +     +  + ++  +     + +          
Sbjct: 82  PGTILGAFISSEISPDIFKILFALVLISSASYIFLKRKIEEKPIDVSHLLLVFSAGASFF 141

Query: 166 TGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            G +S   G+GGG+    LM +  G S+ +A  TS  +    +F  L+V    G
Sbjct: 142 AGIISSLFGIGGGLIFVPLMVVALGISMKRAAPTSQFILMFASFSGLIVHSMLG 195



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 7/103 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +     ASF +G +S LFG+GGGL+ VP++  A         I M  A  TS  ++   
Sbjct: 131 LLVFSAGASFFAGIISSLFGIGGGLIFVPLMVVAL-------GISMKRAAPTSQFILMFA 183

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           S    + H   G  +               ++ + +   + ++
Sbjct: 184 SFSGLIVHSMLGHPDYYQALLLSIGAFAGGILGARLSLEIKEN 226


>gi|146307100|ref|YP_001187565.1| hypothetical protein Pmen_2072 [Pseudomonas mendocina ymp]
 gi|145575301|gb|ABP84833.1| protein of unknown function DUF81 [Pseudomonas mendocina ymp]
          Length = 281

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 99/261 (37%), Gaps = 25/261 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F +G +  + G GGGL+ +P L  A         +  H+ +GT+      
Sbjct: 34  STLAILALVAFTAGFIDAIAG-GGGLLTIPALLTA--------GLPPHLVLGTNKLCATF 84

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R    +    +  +    I  ++ +++   +  ++LN+         G+ 
Sbjct: 85  GSGTAALTFYRRKLFDPGQWRSALLATLIGALLGAVIAHWMPAAWLNQMLPAVVFACGLY 144

Query: 141 MLKRDRL--YCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
           +L         E+  P     ++  G+  GF  G  G G G F T   +L Y   + +A+
Sbjct: 145 LLFGRMPEAPPEQNLPIARGRQWPQGLGLGFYDGVAGPGTGAFWTVSSLLMYPLDLVRAS 204

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++ +    AL V I            + G V     L +    ++   L  + + 
Sbjct: 205 GVARTMNFVSNAAALAVFI------------AFGQVAWVLGLSMGAALMVGAFLGARTAI 252

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G K++   F +++   +  
Sbjct: 253 KGGSKFIRPVFILVVLALTAR 273


>gi|229916106|ref|YP_002884752.1| hypothetical protein EAT1b_0375 [Exiguobacterium sp. AT1b]
 gi|229467535|gb|ACQ69307.1| protein of unknown function DUF81 [Exiguobacterium sp. AT1b]
          Length = 282

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 71/214 (33%), Gaps = 18/214 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS----- 124
           A+  SL +   ++    + H R   +N+           + T + + ++ +++       
Sbjct: 45  AIALSLMLTLGSTTAGTISHIRLRNVNVSHALWIGVFGIVGTWIATPLVFYLEGVDGATL 104

Query: 125 FLNKAFAIFCLLMGILMLK-RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
            ++  +        +   + +  +             I G+  GF+S  +GV GG     
Sbjct: 105 IISLVYIALLTYFALSFFRSKQHVEGSVGTDSVPRLGIIGVFAGFISSLMGVSGGFVLTP 164

Query: 184 LML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           L +      + +A  TS   + LI    ++    +G   N           +  + +I  
Sbjct: 165 LQVKLLNTEMKRAVGTSITAALLIVVSGVISYTVAGAETN----------YLHGLALIA- 213

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            +++ +P   K       +++         T + 
Sbjct: 214 GAMIGSPFGAKQLQRFSSQHVKKALGGFYITVAI 247



 Score = 45.1 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 43/120 (35%), Gaps = 8/120 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D +  + +    +G +S L GV GG V+ P+  K         +  M  A+GTS+     
Sbjct: 135 DSVPRLGIIGVFAGFISSLMGVSGGFVLTPLQVKLL-------NTEMKRAVGTSITAALL 187

Query: 81  TSVMSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             V   + +   G   N       I    I +   +  +       + KA   F + + I
Sbjct: 188 IVVSGVISYTVAGAETNYLHGLALIAGAMIGSPFGAKQLQRFSSQHVKKALGGFYITVAI 247


>gi|288959672|ref|YP_003450013.1| hypothetical protein AZL_028310 [Azospirillum sp. B510]
 gi|288911980|dbj|BAI73469.1| hypothetical protein AZL_028310 [Azospirillum sp. B510]
          Length = 305

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 102/306 (33%), Gaps = 55/306 (17%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + V+L    +     L++   +L G LSG+FGVGGG +M P+L       G+  +    +
Sbjct: 1   MQVYLPIAEMSVNALLVLGMGWLVGFLSGMFGVGGGFLMTPLLIFI----GVPPA----I 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL------------M 117
           A+GT    +   SV   + H R G +++K+    +    + T V               +
Sbjct: 53  AVGTQANQLVAASVSGVLAHWRRGNVDVKLGVVMLGGGVLGTAVGVWVFGILQRLGQIDI 112

Query: 118 ISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK-----------------------FP 154
              +   F         L+     + R R    ++                       + 
Sbjct: 113 AITLSYVFFLGTIGGMMLVESSRAILRRRAPTAKRGKLHRHIWLHGLPFKMRFQRSKLYI 172

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLV 213
              +    G V G L   +G+GGG      M++           TS          A L+
Sbjct: 173 SALLPAGIGAVGGMLVAIMGIGGGFLLVPAMIYLLNMPAGLVAGTSLFQIIFTTAAATLL 232

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
           +  +   ++ +             L++L   ++     T+    +  +   +  ++I+  
Sbjct: 233 QAATNQTVDAMLA-----------LLLLIGGVIGAQFGTRAGSRLRGETARLALALIVVA 281

Query: 274 TSFVFA 279
            +   A
Sbjct: 282 VALKLA 287


>gi|330953364|gb|EGH53624.1| hypothetical protein PSYCIT7_18696 [Pseudomonas syringae Cit 7]
          Length = 259

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 95/264 (35%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 9   LTTLAILAVVAFIAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     +    I   + +++  ++   +LN+   +     G+
Sbjct: 60  FGSATASFTFYRRKLFDPRQWLHAVVGTAIGAALGAVIAHYLPAEWLNQMLPVIVFGCGL 119

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +                    +   G+  GF  G  G G G F T   +L Y   + KA
Sbjct: 120 YLFFGGTPKAPLDSNAPIKRKWQLPQGVSLGFYDGVAGPGTGAFWTVSTLLLYPVDLVKA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V ++SG        + +G       L +    +L        +
Sbjct: 180 SGVARSMNFVSNAVALSVFMFSGQ-----VDYIIG-------LSMGLAVMLGAYFGAGTA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 IKGGAKFIRPVFITVVLGLTVRLA 251


>gi|238025213|ref|YP_002909445.1| putative permease [Burkholderia glumae BGR1]
 gi|237879878|gb|ACR32210.1| Predicted permease [Burkholderia glumae BGR1]
          Length = 268

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 93/272 (34%), Gaps = 40/272 (14%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   L G + GL G GGG++ VP L              M  A   +L  ++ ++ +  
Sbjct: 5   LILGALVGAVLGLTGAGGGILAVPALVVGLGW-------PMQQATPVALIAVSGSAAIGA 57

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           +E  R   +  +            T +       + +  L   FA   L++ + + ++ R
Sbjct: 58  LEAFRQRLVRYRAALLMAAAGMPATSLGVRAAHALPQRLLLALFAAVMLVVALRLWRQVR 117

Query: 147 LYCERKFPDNYVKYI---------------------WGMVTGFLSGALGVGGGIFTNLLM 185
                +   + +                         G VTGF++G LGVGGG     ++
Sbjct: 118 AGRSAQAEASPLCVGRINPETGRLAWTPRTALALAATGAVTGFMTGLLGVGGGFIIVPML 177

Query: 186 L-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
                 S++   ATS  V AL+    +   I  G  +                +     +
Sbjct: 178 RKLTNVSMHGVVATSLMVIALVGVGGIASTIAHGTPVPAQVA-----------IWFSVTT 226

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            +        S+ +  +Y+  GF+ ++   + 
Sbjct: 227 AVGMLAGRLASHRLADRYVQAGFAAVLSVVAL 258



 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G ++GL GVGGG ++VP+L K         ++ MH  + TSL VIA   V        
Sbjct: 157 VTGFMTGLLGVGGGFIIVPMLRKL-------TNVSMHGVVATSLMVIALVGVGGIASTIA 209

Query: 92  HGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           HGT +  ++   +     +  +   L    +   ++   FA    ++ + +L +
Sbjct: 210 HGTPVPAQVAIWFSVTTAVGMLAGRLASHRLADRYVQAGFAAVLSVVALGLLAK 263



 Score = 38.5 bits (89), Expect = 0.97,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 45/119 (37%), Gaps = 13/119 (10%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            I G + G + G  G GGGI     L++  G  + +A          +A  A+      G
Sbjct: 5   LILGALVGAVLGLTGAGGGILAVPALVVGLGWPMQQA--------TPVALIAVSGSAAIG 56

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                L  +    V   A L++    +  T L  + ++ + ++ L   F+ +M   +  
Sbjct: 57  ----ALEAFRQRLVRYRAALLMAAAGMPATSLGVRAAHALPQRLLLALFAAVMLVVALR 111


>gi|255307001|ref|ZP_05351172.1| hypothetical protein CdifA_10462 [Clostridium difficile ATCC 43255]
          Length = 250

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 100/254 (39%), Gaps = 27/254 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + +  FL+  +  + G GGGL+ +PVL            + +H+A+GT+    +   
Sbjct: 4   VIFLCIGGFLAAFVDSIAG-GGGLISMPVLMAI--------GVPVHLAIGTNKFAASAGC 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   + + G IN  +LK  +    I +V+    +  + +  LN       L++ I   
Sbjct: 55  ISSAYRYAKSGKINNNLLKKLVPFTIIGSVLGVRCVLSISEEILNVLVVAMILIVAIYTF 114

Query: 143 KRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
               L  E  F      +  +  +  ++ GF  G  G G G F     +  YG     A+
Sbjct: 115 ISKNLGQEDNFEAVNKKNLRLGMLMALIMGFYDGFFGPGTGTFLTFGFIKIYGYDFLHAS 174

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++      +LL+ + +G             V+    ++   + I+   +  K++ 
Sbjct: 175 ANTKILNLTSNITSLLLFMINGQ------------VDYKIAIVFALVMIMGAYVGAKVAI 222

Query: 257 MIGKKYLTIGFSMI 270
             G K +   F ++
Sbjct: 223 KKGSKMIKPIFLVM 236


>gi|165869042|ref|ZP_02213702.1| putative membrane protein [Bacillus anthracis str. A0488]
 gi|164715768|gb|EDR21285.1| putative membrane protein [Bacillus anthracis str. A0488]
          Length = 300

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 90/263 (34%), Gaps = 23/263 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  F +  + G  G+  G+     L   F +     S  +H+A         
Sbjct: 1   MQKLIVFAIIGFSAQLIDGALGMAYGVTST-SLLLMFGIAPAVASASVHLAE-------V 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H + G ++   +        I   V +  +S++    +    ++F   +G+
Sbjct: 53  VTTAASGASHLKFGNVDKYTVSRLTLPGAIGAFVGACFLSNLPGDVIKPYISLFLFTLGV 112

Query: 140 LMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            +L R     ++    K          G+  GF+    G G G  T  ++L  G    K 
Sbjct: 113 YILLRFIIQKQIVTSNKRMSAKQLVPLGLFAGFVDSTGGGGWGPITTPVLLARGNEARKI 172

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             +       +A  A +    S GW            V+   V  ++   I+  P+A  L
Sbjct: 173 IGSVDTSEFPVALAATIGFFISLGWEQ----------VSWFWVFALMLGGIVAAPIAAWL 222

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             ++    L +    ++  T+  
Sbjct: 223 VRIVPSHLLGVLVGGLIIFTNIR 245


>gi|300176156|emb|CBK23467.2| unnamed protein product [Blastocystis hominis]
          Length = 364

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 13/129 (10%)

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALI 206
                   N   +  G+V   L   +G+GGG     L+  +G  S ++A + S       
Sbjct: 76  PESSALKRNVAGFTVGLVASALGSMVGLGGGFIIIPLLTTFGGMSQHQAASCSLVSIFAT 135

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           A       I            S G ++I A   I   S+++    +K S+    K L   
Sbjct: 136 ALTGTGTYI------------SQGLIDIPAAAAITVTSMIMARYGSKWSHNFESKKLKRY 183

Query: 267 FSMIMFTTS 275
           + ++    +
Sbjct: 184 YGILCLLVA 192



 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 53/288 (18%), Positives = 98/288 (34%), Gaps = 59/288 (20%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
              ++  L  + G+GGG +++P+L+           +  H A   SL  I  T++     
Sbjct: 90  VGLVASALGSMVGLGGGFIIIPLLTTF-------GGMSQHQAASCSLVSIFATALTGTGT 142

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
           +   G I++           I     S    + +   L + + I CLL+  L+  + R+ 
Sbjct: 143 YISQGLIDIPAAAAITVTSMIMARYGSKWSHNFESKKLKRYYGILCLLVAPLLPIKTRIM 202

Query: 149 CERK-------------------------------------FPDNYVKYIWGMVTGFLSG 171
            +RK                                        + +    G+V G +SG
Sbjct: 203 EKRKEQEAQKKAQEVSNLAEENAKLGYRDCLSMEAMKQSEVVEHSPLLLSLGLVAGTMSG 262

Query: 172 ALGVGGGIFTNL-LMLFYGASIYKATATS-AGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
             GVGGGI  +  L LF   +  K   TS A +    +  A L                 
Sbjct: 263 FFGVGGGIIVSPSLCLFTQMAPKKIMGTSLASMIIPTSISAHLSYKK------------- 309

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G + +G  L I   S++   + +K++  +  K +      ++  +   
Sbjct: 310 GNLVLGTALPICLGSVVGGVIGSKVAGKMPAKKIQWVLVALLLVSGLK 357



 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 54/134 (40%), Gaps = 7/134 (5%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  + +  VV++  L++    ++GT+SG FGVGGG+++ P L        +     M   
Sbjct: 235 MEAMKQSEVVEHSPLLLSLGLVAGTMSGFFGVGGGIIVSPSLCL---FTQMAPKKIM--- 288

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
            GTSL  +   + +S     + G + +           +  V+ S +   +    +    
Sbjct: 289 -GTSLASMIIPTSISAHLSYKKGNLVLGTALPICLGSVVGGVIGSKVAGKMPAKKIQWVL 347

Query: 131 AIFCLLMGILMLKR 144
               L+ G+  +  
Sbjct: 348 VALLLVSGLKSVLS 361


>gi|328475699|gb|EGF46445.1| hypothetical protein LM220_02535 [Listeria monocytogenes 220]
          Length = 176

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 90/179 (50%), Gaps = 16/179 (8%)

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA-IFCLLMGILMLKRDRLYCERKFPDNY 157
           +          TT + +++   + ++     +  +  +L+GI++ K+ R   +  F   Y
Sbjct: 1   MALKIAVTSIPTTFLGAMVNQMLPEAVYRFLYGALIVVLLGIMIWKKKRHNEKPHFLSEY 60

Query: 158 --VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
             + Y++G++ GFL+G  G+GGG I   +L+L +  +   A+ATS+ V+ L +  ++   
Sbjct: 61  RIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLNQKTASATSSYVTLLTSLASIGSY 120

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
              G        +S+G       + ++P +I+   + T+L+ ++ +K++ I F++++  
Sbjct: 121 AIIGGS-----DFSIG-------IYMIPGAIIGALIGTRLNKLLDEKWIAILFNVLLIA 167



 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
              + +Y  +  V   + G L+GLFG+GGG +++P+L   F L           A  TS 
Sbjct: 54  PHFLSEYRIIPYVFGVIIGFLAGLFGIGGGPIVIPILLLIFMLN-------QKTASATSS 106

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            V   TS+ S   +   G  +  I    I    I  ++ + +   +D+ ++   F +  +
Sbjct: 107 YVTLLTSLASIGSYAIIGGSDFSIGIYMIPGAIIGALIGTRLNKLLDEKWIAILFNVLLI 166

Query: 136 LMGILMLKR 144
            +  L L +
Sbjct: 167 ALFALNLIK 175


>gi|330967653|gb|EGH67913.1| hypothetical protein PSYAC_24023 [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 259

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 96/264 (36%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 9   LTTLAILAVVAFVAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     I    +   + +++  ++   +LN+   +     G+
Sbjct: 60  FGSATASFTFYRRKLFHPRQWLHAIVGTAVGAALGAIIAHYLPAEWLNQMLPVIVFGCGL 119

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G+  GF  G  G G G F T   +L Y   + KA
Sbjct: 120 YLLFGGTPKAPLDSDAPIKKKWQLPQGLGLGFYDGIAGPGTGAFWTVSTLLMYPVDLVKA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V I+SG        + +G       L +    +L        +
Sbjct: 180 SGVARSMNFVSNIVALSVFIFSGQ-----VDYIIG-------LTMGLAVMLGAYFGAGTA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 IKGGAKFIRPVFITVVLGLTVRLA 251


>gi|56420173|ref|YP_147491.1| hypothetical protein GK1638 [Geobacillus kaustophilus HTA426]
 gi|56380015|dbj|BAD75923.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 295

 Score = 70.1 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 93/263 (35%), Gaps = 26/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +   F++  + G  G+  G V    L   F +     S  +H+A          T+
Sbjct: 4   LIVFVFVGFIAQLIDGSLGMAYG-VTSSTLLLTFGIAPAVASASVHLAE-------VVTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H + G ++ ++    I    +   V +  +S++    +    ++F L +G  ++
Sbjct: 56  AASGASHWKFGNVDRRMAFRLIIPGSVGAFVGACFLSNLPGDLIKPYVSLFLLALGFYII 115

Query: 143 KRDRLYCERKFPDNYVKYI------WGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKA 195
            R  +   R       ++        G+V GFL    G G G     ++L        K 
Sbjct: 116 YRFLVLNGRAPSTPGKQWSNKQLVPLGLVAGFLDATGGGGWGPIATPVLLANKSMEARKV 175

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             T       +A  A L  + S GW            VN   VL ++   ++  P+A  L
Sbjct: 176 VGTVDTSEFAVALSATLGFVISLGWEQ----------VNWHWVLTLMAGGVVAAPIAAWL 225

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +    L +    ++  T+  
Sbjct: 226 VRKLPSHLLGVLVGGLIILTNVR 248



 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 47/138 (34%), Gaps = 4/138 (2%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++    ++G L    G G G +  PVL     +    ++  +   + TS   +A ++ + 
Sbjct: 138 LVPLGLVAGFLDATGGGGWGPIATPVLLANKSM----EARKVVGTVDTSEFAVALSATLG 193

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           F+       +N   +   +    +   + + ++  +    L        +L  +  L   
Sbjct: 194 FVISLGWEQVNWHWVLTLMAGGVVAAPIAAWLVRKLPSHLLGVLVGGLIILTNVRTLLHA 253

Query: 146 RLYCERKFPDNYVKYIWG 163
                  +P  Y   + G
Sbjct: 254 WEAPAPVYPTVYGLIVIG 271


>gi|114563151|ref|YP_750664.1| hypothetical protein Sfri_1980 [Shewanella frigidimarina NCIMB 400]
 gi|114334444|gb|ABI71826.1| protein of unknown function DUF81 [Shewanella frigidimarina NCIMB
           400]
          Length = 250

 Score = 70.1 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 94/251 (37%), Gaps = 15/251 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+ + L G +  + G GG ++ VPVL     +          +A+ +SL ++   S++S 
Sbjct: 6   IIGALLIGLVLSVLGSGGSILTVPVLLYLIGMQP-------QLAIASSLCIVGAISLISS 58

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           M   +H  ++   +  +       T + + + S          F I  L+  ++M +   
Sbjct: 59  MGFIKHKKVSWPHVLLFGLPGMAGTYLGAWLSSFFSSDIQLTVFVILMLIGAVMMWRNQS 118

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSAL 205
              +    +       G+  G ++G +GVGGG      ++   G  +  A  TS  + ++
Sbjct: 119 SRYQAGKLNIAKILSQGLAVGVVTGFVGVGGGFLIVPALVLLGGIEMSLAIGTSLLIISM 178

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
            +                   WS+       + I++   ++ +     ++  + K  L  
Sbjct: 179 NSLVGFAKYYSLLSSKGFEFDWSI-------IAIMIAGGLVGSIAGQWINQYLPKAVLQK 231

Query: 266 GFSMIMFTTSF 276
            F++ +   + 
Sbjct: 232 IFAVFLVLMAL 242



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 12/104 (11%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR-----RHGTINMKILK 101
           ++VP L            I M +A+GTSL +I+  S++ F ++      +    +  I+ 
Sbjct: 152 LIVPALVLL-------GGIEMSLAIGTSLLIISMNSLVGFAKYYSLLSSKGFEFDWSIIA 204

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
             I    + ++    +  ++ K+ L K FA+F +LM + ++ + 
Sbjct: 205 IMIAGGLVGSIAGQWINQYLPKAVLQKIFAVFLVLMALFIVTKS 248


>gi|325918699|ref|ZP_08180797.1| putative permease [Xanthomonas vesicatoria ATCC 35937]
 gi|325535091|gb|EGD06989.1| putative permease [Xanthomonas vesicatoria ATCC 35937]
          Length = 261

 Score = 70.1 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 91/261 (34%), Gaps = 21/261 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L  ++    G   GL G GG ++ VP++     +         H+A+GTS   +A  +
Sbjct: 6   FLLGALSGVAVGFTLGLVGGGGSILAVPLMVYLVGVQNP------HLAIGTSALAVAANA 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++    H R   +  +    +     +     +++   +D   L   FA+  L +  +M+
Sbjct: 60  LIGLTNHARKHNVKWRCASAFATAGVVGAWFGAMLGKAMDGQRLLALFALLMLAVAGMMV 119

Query: 143 KRDRLYCERKF----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATA 197
           +      +        +       G  TG LSG  G+GGG      ++   G  I  A  
Sbjct: 120 RSRGREGDPSVIFNRSNAPKLLGSGAATGLLSGFFGIGGGFLVVPGLIASTGMPILFAVG 179

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +S    A       +    SG     L    +G             S+    LA +L++ 
Sbjct: 180 SSLVAVAAFGLTTAVSYASSGLVAWSLAGVFIG--------GGAIGSLFGARLAARLAHR 231

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
                L +  + ++   +F  
Sbjct: 232 --NGVLNLVLAGLIVVVAFYM 250


>gi|227327267|ref|ZP_03831291.1| hypothetical protein PcarcW_08083 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 266

 Score = 70.1 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 92/238 (38%), Gaps = 25/238 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + ++     L+G +  + G GGGL+ +P L  A         +    A+ T+      
Sbjct: 9   EMLAVLFFVGALAGFIDSIAG-GGGLLTIPALLAA--------GLSPAQALATNKLQAVG 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R   +N+   K  I +    +   + +I  ++  FL +   +  + +G+ 
Sbjct: 60  GSFSASLYFIRRRAVNLGEQKLAIALTFAGSTFGAWLIQQINADFLRQLLPLLIIGIGLY 119

Query: 141 MLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L   ++  E   R+        + G   GF  G  G G G F  L  +  YG ++ KAT
Sbjct: 120 FLLTPKIGDEDRQRRLSPLPFAIVAGSCVGFYDGFFGPGAGSFYALAFVTLYGFNLAKAT 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A +  ++    F  LL  + SG  +  +              ++L   IL   L  K+
Sbjct: 180 AHAKVLNFTSNFGGLLFFMLSGKVVWVV------------GGVMLIGQILGARLGAKM 225


>gi|15923039|ref|NP_370573.1| hypothetical protein SAV0049 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15925753|ref|NP_373286.1| hypothetical protein SA0046 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148266482|ref|YP_001245425.1| hypothetical protein SaurJH9_0037 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150392515|ref|YP_001315190.1| hypothetical protein SaurJH1_0037 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156978379|ref|YP_001440638.1| hypothetical protein SAHV_0048 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|221141500|ref|ZP_03565993.1| hypothetical protein SauraJ_07648 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|254663978|ref|ZP_05143450.1| hypothetical protein SauraM_00230 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257795457|ref|ZP_05644436.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|258407202|ref|ZP_05680349.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|258422014|ref|ZP_05684933.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|258446403|ref|ZP_05694559.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|258449236|ref|ZP_05697340.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|258453141|ref|ZP_05701133.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|258455143|ref|ZP_05703104.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|282929383|ref|ZP_06336946.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|295407702|ref|ZP_06817489.1| hypothetical protein SMAG_02873 [Staphylococcus aureus A8819]
 gi|295429342|ref|ZP_06821964.1| hypothetical protein SIAG_01555 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297246732|ref|ZP_06930551.1| hypothetical protein SLAG_02787 [Staphylococcus aureus A8796]
 gi|304380024|ref|ZP_07362748.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|5360839|dbj|BAA82209.1| unnamed protein product [Staphylococcus aureus]
 gi|13699965|dbj|BAB41264.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14020989|dbj|BAB47613.1| hypothetical protein [Staphylococcus aureus]
 gi|14245816|dbj|BAB56211.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|28465868|dbj|BAC57485.1| hypothetical protein [Staphylococcus aureus]
 gi|62815951|emb|CAH17602.1| hypothetical protein [Staphylococcus aureus]
 gi|70568196|dbj|BAE06293.1| conserved hypothetical protein [Staphylococcus aureus]
 gi|147739551|gb|ABQ47849.1| protein of unknown function DUF81 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149944967|gb|ABR50903.1| protein of unknown function DUF81 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156720514|dbj|BAF76931.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|166203517|gb|ABY84696.1| unknown [Staphylococcus aureus]
 gi|169403113|emb|CAP17714.1| hypothetical protein [Staphylococcus pseudintermedius]
 gi|195963191|emb|CAQ43016.1| hypothetical protein [Staphylococcus aureus]
 gi|221327658|gb|ACM17502.1| conserved hypothetical protein [Staphylococcus aureus]
 gi|238773847|dbj|BAH66410.1| hypothetical protein [Staphylococcus aureus]
 gi|257789429|gb|EEV27769.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|257841211|gb|EEV65658.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|257841989|gb|EEV66419.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|257854812|gb|EEV77759.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|257857510|gb|EEV80407.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|257859175|gb|EEV82031.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|257862702|gb|EEV85469.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|269939598|emb|CBI47964.1| putative membrane protein (fragment) [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282589052|gb|EFB94155.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|285815773|gb|ADC36260.1| Protein of unknown function DUF81 [Staphylococcus aureus 04-02981]
 gi|288551744|gb|ADC53341.1| hypothetical protein [Staphylococcus aureus]
 gi|294967441|gb|EFG43483.1| hypothetical protein SMAG_02873 [Staphylococcus aureus A8819]
 gi|295127101|gb|EFG56745.1| hypothetical protein SIAG_01555 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|295443915|dbj|BAJ06385.1| hypothetical protein [Staphylococcus aureus]
 gi|297176417|gb|EFH35688.1| hypothetical protein SLAG_02787 [Staphylococcus aureus A8796]
 gi|304341397|gb|EFM07312.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|304560881|gb|ADM43464.1| putative membrane protein [Staphylococcus cohnii]
 gi|315129580|gb|EFT85572.1| hypothetical protein CGSSa03_11386 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329312764|gb|AEB87177.1| hypothetical protein SAT0131_00042 [Staphylococcus aureus subsp.
           aureus T0131]
          Length = 214

 Score = 70.1 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 74/171 (43%), Gaps = 2/171 (1%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P +     L+GI  +   ++A G +   +  +++   +  R+    + K++      + I
Sbjct: 33  PAILILPPLIGI-PAYSAYIASGLTSSQVFFSTLSGSLNARKQPAFSPKLVIYMGGGMLI 91

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            +++ +++ S  + +F+N  + I  +L  ILM  + +   +       +  I G   G +
Sbjct: 92  GSMLGAILASLFNATFVNTVYVIIAILALILMFIKVKPTTQETKSKPLLFIIVGFGIGVI 151

Query: 170 SGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           SG +G GG      ++L  +   +      S  ++ + +  A  +++  G+
Sbjct: 152 SGIVGAGGAFIIIPVLLALFKLPMNTVVNNSIAIAFISSVGAFFIKLMQGY 202


>gi|229590241|ref|YP_002872360.1| hypothetical protein PFLU2779 [Pseudomonas fluorescens SBW25]
 gi|229362107|emb|CAY49009.1| putative membrane protein [Pseudomonas fluorescens SBW25]
          Length = 259

 Score = 70.1 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 93/264 (35%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++   +F++G +  + G GGGL+  P L  A    G+      H+ +GT+     
Sbjct: 9   LTTLAILAAVAFIAGFIDAIAG-GGGLLTTPALLTA----GMPP----HLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     I    I  +  +++  ++    LNK   +     G+
Sbjct: 60  FGSATASFTFYRRKLFHPRQWVHAIVGTLIGALAGAVVAHYLPAETLNKMLPVIVFGCGL 119

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G   GF  G  G G G F T   ML +   + KA
Sbjct: 120 YLLFGGTPKAPLDADAPIKKKWQSTQGFGLGFYDGVAGPGTGAFWTVSTMLLHPIDLVKA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V I++G             V+    L +    +       + +
Sbjct: 180 SGVARSMNFVSNAAALSVFIFNGS------------VDWIVGLAMGVSVMCGAFFGARSA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 ISGGAKFIRPVFITVVLGLTVRLA 251


>gi|227498781|ref|ZP_03928921.1| integral membrane protein [Acidaminococcus sp. D21]
 gi|226904233|gb|EEH90151.1| integral membrane protein [Acidaminococcus sp. D21]
          Length = 254

 Score = 70.1 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 90/239 (37%), Gaps = 27/239 (11%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++  +++A F+   +  + G GGGL+ +P          +   + M  A+G++       
Sbjct: 8   HLGFLMLAGFVGSFIDAIVG-GGGLITLPA--------WMATGLPMAYALGSNKMASVVG 58

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ SF    R G ++ ++L+    +  I +V+ +++ S + +  L        +++ +  
Sbjct: 59  AITSFTTFMRSGRVDRRMLRYM-PLSVIGSVLGAVIASSLPEMLLRYIVIAALVIVALYT 117

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVT-----GFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
             +       +      K + G++      G   G  G G G F     L++G +   A 
Sbjct: 118 FFKKEWGGADQIASFSTKDLAGILFMILFLGAYDGFFGPGTGTFLIFGFLYFGYNFVTAA 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             +  ++       +   ++            LG V     + +    I+   L  K++
Sbjct: 178 GNAKAMNLASNLGGIAAFLF------------LGKVYFIYAIPMALCEIIGAHLGAKIA 224


>gi|94311333|ref|YP_584543.1| hypothetical protein Rmet_2397 [Cupriavidus metallidurans CH34]
 gi|254241482|ref|ZP_04934804.1| hypothetical protein PA2G_02178 [Pseudomonas aeruginosa 2192]
 gi|24461528|gb|AAN62099.1|AF440523_6 conserved hypothetical membrane protein [Pseudomonas aeruginosa]
 gi|93355185|gb|ABF09274.1| putative membrane protein [Cupriavidus metallidurans CH34]
 gi|126194860|gb|EAZ58923.1| hypothetical protein PA2G_02178 [Pseudomonas aeruginosa 2192]
          Length = 268

 Score = 70.1 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 89/274 (32%), Gaps = 42/274 (15%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V   + G + GL G GGG+  VP L            + +  A   +L  +   + +  +
Sbjct: 8   VLGLIIGAVLGLTGAGGGIFAVPALVFGL-------GMDIRQAAPVALLAVGAAATLGAL 60

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
           +  R G +  K          +T  +       +   +LN  F    L++   M    R 
Sbjct: 61  QGLRQGVVRYKAAMMLAAAGAVTAPLGVQFAHWLSPRWLNLIFVAIMLVVAYRMFMSSRG 120

Query: 148 YCERK----------------------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
              +                                 G+V+G  +G LGVGGG      +
Sbjct: 121 SQTQDDLADEPARVCKISKDTGRFVWNVRTATTLGSIGIVSGLATGMLGVGGGFIIVPAL 180

Query: 186 LFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
             +    ++   ATS  V AL++   + +    G  L   P W+            +  +
Sbjct: 181 AHFSELRMHSIVATSLMVIALLSAVTVFIAWSHGMTLTA-PAWTF-----------VLTA 228

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++   L   L+  I  K L   FS+     + + 
Sbjct: 229 LVGMSLGRVLARRIPSKMLQRVFSITCVAVAALM 262



 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 7/116 (6%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             +SG  +G+ GVGGG ++VP L+           + MH  + TSL VIA  S ++    
Sbjct: 158 GIVSGLATGMLGVGGGFIIVPALAHF-------SELRMHSIVATSLMVIALLSAVTVFIA 210

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
             HG         ++    +   +  ++   +    L + F+I C+ +  LML R+
Sbjct: 211 WSHGMTLTAPAWTFVLTALVGMSLGRVLARRIPSKMLQRVFSITCVAVAALMLMRN 266


>gi|242372291|ref|ZP_04817865.1| protein of hypothetical function DUF81 [Staphylococcus epidermidis
           M23864:W1]
 gi|242350020|gb|EES41621.1| protein of hypothetical function DUF81 [Staphylococcus epidermidis
           M23864:W1]
          Length = 299

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 87/259 (33%), Gaps = 24/259 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +A FL+  + G  G+G G       S      GI  ++       T       T+
Sbjct: 4   VLIFAIAGFLAQLVDGSLGMGFGA----SSSSILLTYGIAPAVV----SATVHFSEIATT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H +   ++   +        I+  + + +++ +   ++    A+F L MG  +L
Sbjct: 56  AASGTSHWKFENVHKPTMLKLAIPGSISAFIGAGVLTFIHGDYIKPFIALFLLSMGFYIL 115

Query: 143 KRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKA 195
            +       +         ++     G + GFL    G G G     L+L         A
Sbjct: 116 YQFLFKRTHEHHTHVGDLSSFKVIPQGAIAGFLDAIGGGGWGPVNTPLLLSSKKIQPRYA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T +     +   A L  I             L  +N  AV+ +    ++  P++  L 
Sbjct: 176 IGTVSASEFFVTSSAALSFIIF---------LGLTQINWFAVIALSVGGMIAAPISAYLV 226

Query: 256 YMIGKKYLTIGFSMIMFTT 274
            ++    L I    ++  T
Sbjct: 227 KILPINILAICVGGLIIFT 245


>gi|90411558|ref|ZP_01219568.1| hypothetical membrane spanning protein [Photobacterium profundum
           3TCK]
 gi|90327448|gb|EAS43801.1| hypothetical membrane spanning protein [Photobacterium profundum
           3TCK]
          Length = 257

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 95/266 (35%), Gaps = 28/266 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F +G +  + G GGG++ VP L            +  H+A+GT+      
Sbjct: 8   SMMVMLGLIAFSAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATF 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + R    +    +       I  ++ +L+++ +  S+L K   +  L + + 
Sbjct: 59  ASSTAAWTYYRKQLFSPLFWRASFIATFIGAILGTLVVNIISTSWLEKGLPLVILAIAVY 118

Query: 141 MLKRDRLYCERKFPDNYVKYIW------GMVTGFLSGALGVGGGIF-TNLLMLFYGASIY 193
            +       +        K +       G   GF  G +G G G F T   M  Y   I 
Sbjct: 119 TIWHPHPKGDSSKLPEPSKALMKKQWFQGGSLGFYDGLVGPGTGAFWTVSSMAMYQLDIL 178

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +A+  +  ++      +L+                LG +N    L +    +L   L   
Sbjct: 179 RASGLAKAMNFTSNITSLITFAI------------LGQINYALGLTMGACIMLGAFLGAH 226

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +   G K++   F  ++   +   A
Sbjct: 227 SAIRFGAKFIRPVFITVVVILAGKLA 252


>gi|145588203|ref|YP_001154800.1| hypothetical protein Pnuc_0014 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145046609|gb|ABP33236.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 263

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/266 (18%), Positives = 101/266 (37%), Gaps = 25/266 (9%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M+    +  +    L+  A+F +G +  + G GGGL+ VP L  A+        +     
Sbjct: 1   MIGPPIEFSIYIWPLLFCAAFFAGLVDAVAG-GGGLIQVPALFAAY------PDVPPATL 53

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           + T+       ++ +  +  RH ++   ++   I    + +++ +  +SH     L KA 
Sbjct: 54  LSTNKLASVGGTLNAARKFLRHVSLPWAVVGPAIVAAFVGSLMGANAVSHFPAEPLRKAL 113

Query: 131 AIFCLLMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNL-L 184
               + + I    +  L              +   + G+  GF  G  G G G F     
Sbjct: 114 PFVLVFLLIYTWFQPSLGEAHAPKEVSHYQKFKALLLGLTIGFYDGFFGPGTGSFLLFGF 173

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           + F+G     A+A +  V+      A+L+              SLG +N     +++  +
Sbjct: 174 VRFFGFDFLHASAATKLVNVSTNLAAILMLA------------SLGQINWPLGFVMMIAN 221

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMI 270
           I  +   ++L+   G  ++   F +I
Sbjct: 222 IAGSQFGSRLAIKHGSGFVRKVFLVI 247


>gi|260461931|ref|ZP_05810176.1| protein of unknown function DUF81 [Mesorhizobium opportunistum
           WSM2075]
 gi|259032178|gb|EEW33444.1| protein of unknown function DUF81 [Mesorhizobium opportunistum
           WSM2075]
          Length = 307

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 90/279 (32%), Gaps = 56/279 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G LSG+FGVGGG ++ P+L           +I   +A+ T    +  +S
Sbjct: 14  VFVLLAMGAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPAIAVATGANQVIASS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
               + H + GT++ K+    +    + +     + + +        F++  + +    +
Sbjct: 66  FSGALSHMKRGTLDFKLGGVLLAGGVVGSTGGIFVFAFLRRLGQLDLFISLLYVVLLGTV 125

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R    + F         G   
Sbjct: 126 GGLMLVESVNALRATRSGAAPVLKKSGQHNWIHRLPLKMRFRASKLFVSVIPVLGLGAGI 185

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           GFLS  +GVGGG      +++           TS       +    LV   +   ++ + 
Sbjct: 186 GFLSSIMGVGGGFIMVPALIYLLKVPTNVVIGTSLFQIIFTSAYTTLVHASTNQTVDVML 245

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
            +           +++   +       K    +  + L 
Sbjct: 246 AF-----------LLMAGGVAGAQYGAKAGQRLRGEQLR 273


>gi|251792163|ref|YP_003006883.1| inner membrane protein YfcA [Aggregatibacter aphrophilus NJ8700]
 gi|247533550|gb|ACS96796.1| inner membrane protein YfcA [Aggregatibacter aphrophilus NJ8700]
          Length = 255

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 109/264 (41%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           VD + ++   +F++G +  + G GGGL+ +P L     + GI  +    VA+GT+     
Sbjct: 5   VDILAILFAVAFIAGFIDAIAG-GGGLITIPALL----MTGIPPA----VALGTNKLQAC 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  + +   R   +    +   + ++ + +V  +++I  +D S + K      L +G+
Sbjct: 56  GGSFSASLYFLRKRAVKFSEVWLILLMIFLGSVAGTILIQLIDASLIKKILPFLILAIGL 115

Query: 140 LMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
             L   +L  E   ++       +  G + GF  G  G G G I +   +   G ++ KA
Sbjct: 116 YFLLTPKLGDEDRKQRLSYPIFAFCIGSLMGFYDGFFGPGTGSIMSLACVTLLGFNLAKA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           TA +  ++      +L+  +  G  L     W++G       L+++    +      K+ 
Sbjct: 176 TAHAKVMNFTSNLASLIFFLIGGQIL-----WTVG-------LVMMAGQFIGANFGAKMV 223

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              GK  +     ++ F  +   A
Sbjct: 224 MAKGKTLIRPMVVVMSFIMTIKMA 247


>gi|238020096|ref|ZP_04600522.1| hypothetical protein VEIDISOL_01977 [Veillonella dispar ATCC 17748]
 gi|237863620|gb|EEP64910.1| hypothetical protein VEIDISOL_01977 [Veillonella dispar ATCC 17748]
          Length = 282

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 102/268 (38%), Gaps = 26/268 (9%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           +Y   L+        +  + L+ VA   +G +  + G GGGL+ VP +           +
Sbjct: 17  VYMEWLIEVTGLPFDILILVLLAVAGAFAGFVDSIVG-GGGLISVPAMLL--------TN 67

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +   +A+G++       +  + +   R+  ++  +++  +    I +++ +L +  +   
Sbjct: 68  LPPSMALGSNKLSSIFGAGSASITFLRNHMVDFSLVRKLLPFTFIGSMIGTLAVVSLPPL 127

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI-----WGMVTGFLSGALGVGGGI 179
           ++     +  + + + ++ +       +      K +     + +  G   G +G G G 
Sbjct: 128 YVKPIIIVLLVCVTLFVVFKKDWGEINRTSAVAGKALYICMAFALGIGVYDGFIGPGTGT 187

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
           F  +  +F G     A+A +  ++      +L+V             + LG VNI   L 
Sbjct: 188 FLIMGFIFTGFDFLHASANAKILNFTSNLASLIVF------------FCLGHVNIKYGLA 235

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGF 267
                I+   L + L+   G   + + F
Sbjct: 236 TGVGQIIGAYLGSHLAIAKGSSLVRVVF 263


>gi|268679193|ref|YP_003303624.1| hypothetical protein Sdel_0553 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268617224|gb|ACZ11589.1| protein of unknown function DUF81 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 250

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 80/233 (34%), Gaps = 22/233 (9%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            ++VP L              + +A+G S+  +  +S+     + + G + +       F
Sbjct: 26  TILVPTLIYF--------GYDIKMAIGISVMQMIFSSMFGSYHNYKAGVLQLHSGIYLGF 77

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
              I    + L++  +    L   FA    L          +          + +  G+V
Sbjct: 78  GALIGAGFSGLIVDALSSLALLILFASILALSIYKFFSAPIVPAHEPNESKSLLFGVGIV 137

Query: 166 TGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            G ++ + G GG IF    ++ F    I KA  T+       +    +    SG      
Sbjct: 138 IGAIAISTGTGGAIFLTPFLVGFLHWDIKKAVGTTLFFIIFGSISGFISLALSG-----H 192

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             +++G       + +   S+L      KLS+ + KK       + ++   FV
Sbjct: 193 VDYTVG-------VAVGIGSVLGVYFGVKLSHRVEKKVQKRAL-LFLYVVMFV 237



 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 48/140 (34%), Gaps = 7/140 (5%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           +Y F     +      +   L+     + G ++   G GG + + P L            
Sbjct: 110 IYKFFSAPIVPAHEPNESKSLLFGVGIVIGAIAISTGTGGAIFLTPFLVGFLHWD----- 164

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
             +  A+GT+L  I   S+  F+     G ++  +         +       +   V+K 
Sbjct: 165 --IKKAVGTTLFFIIFGSISGFISLALSGHVDYTVGVAVGIGSVLGVYFGVKLSHRVEKK 222

Query: 125 FLNKAFAIFCLLMGILMLKR 144
              +A     ++M +L L +
Sbjct: 223 VQKRALLFLYVVMFVLTLNK 242


>gi|299536682|ref|ZP_07049994.1| hypothetical protein BFZC1_11707 [Lysinibacillus fusiformis ZC1]
 gi|298728166|gb|EFI68729.1| hypothetical protein BFZC1_11707 [Lysinibacillus fusiformis ZC1]
          Length = 253

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 95/246 (38%), Gaps = 26/246 (10%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           +F++  L+ + G GGGL+ +P L       G+  S     A+ T+      ++  S +  
Sbjct: 15  AFIASFLNAIVG-GGGLISLPALMAV----GLPPST----AIATNKLANTISNGTSMLTF 65

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL-- 147
            R G ++ K +   +  + + +++ +  +  V  + L     +  +L+    + +     
Sbjct: 66  LRAGKVDFKKIGKILPFIFVGSLLGAFTVHLVSPAILKPLMLVMLVLVAAYTMFKKDWGQ 125

Query: 148 -YCERKFPDNYVKYIWGMV--TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            Y ER           G     GF  G  G G G F   ++L  G    +A   +   + 
Sbjct: 126 QYQERVLSTAKNLAFIGAFAAIGFYDGFFGPGTGSFFIFILLMMGYDFLQAAGNAKAFNF 185

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
                AL++ +  G  ++ L  +S+GFV            I    L +K +   G   + 
Sbjct: 186 TSNLAALIMFLVLG-EVHFLYGFSMGFVM-----------IFGAILGSKFALKRGTSMMR 233

Query: 265 IGFSMI 270
           + F ++
Sbjct: 234 VIFIVM 239


>gi|330971289|gb|EGH71355.1| hypothetical protein PSYAR_12404 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 259

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 96/264 (36%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 9   LTTLAILAVVAFIAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     +    +   + +++  ++   +LN+   +     G+
Sbjct: 60  FGSATASFTFYRRKLFDPRQWLHAVVGTAVGAALGAVIAHYLPAEWLNQMLPVIVFGCGL 119

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G+  GF  G  G G G F T   +L Y   + KA
Sbjct: 120 YLLFGGTPKAPLDSNAPIRKKWQLPQGLGLGFYDGVAGPGTGAFWTVSTLLLYPVDLVKA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V I+SG        + +G       L +    +L        +
Sbjct: 180 SGVARSMNFVSNAVALSVFIFSGQ-----VDYIIG-------LSMGLAVMLGAYFGAGTA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 IKGGAKFIRPVFITVVLGLTVRLA 251


>gi|255318113|ref|ZP_05359357.1| putative membrane protein [Acinetobacter radioresistens SK82]
 gi|255304824|gb|EET83997.1| putative membrane protein [Acinetobacter radioresistens SK82]
          Length = 292

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 92/278 (33%), Gaps = 44/278 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  L G   G+ GVGGG +M P+L   F+       I  H+A+GT L   A +    
Sbjct: 7   FILAGVLVGFCVGITGVGGGSLMTPILISLFR-------IEPHIAIGTDLLYAAISKFCG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
            + H R   I   I+          +  T  ++ H           L         L GI
Sbjct: 60  SLVHARKLNIVWPIVLWLALGSIPASFATHWVLEHYLSQSTHYKAVLTTVLGFMLTLTGI 119

Query: 140 LMLKR----------DRLYCERK-------FPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++ R           +     +           +     G+V G       VG G F  
Sbjct: 120 SIIFRAQIEKFFSRFRKPEVSDQEQALFANPRRRFYILFMGIVLGIFVTLSSVGAGAFGI 179

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
           + ++       + +   +    + L+              + GL   S G V+   ++ +
Sbjct: 180 MALILMFPNLPMIRIIGSDVVHAVLLTL------------VAGLGHMSSGNVDFTLLMWL 227

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L  SI    + T +S  + ++ +     + +F     F
Sbjct: 228 LVGSIPAIIVGTLISSRLPERIIRKILGITLFALGINF 265



 Score = 40.4 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 49/138 (35%), Gaps = 7/138 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            I+    + G    L  VG G   +  L   F       ++ M   +G+ +      +++
Sbjct: 155 YILFMGIVLGIFVTLSSVGAGAFGIMALILMF------PNLPMIRIIGSDVVHAVLLTLV 208

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-MLK 143
           + + H   G ++  +L   +       +V +L+ S + +  + K   I    +GI  ML 
Sbjct: 209 AGLGHMSSGNVDFTLLMWLLVGSIPAIIVGTLISSRLPERIIRKILGITLFALGINFMLH 268

Query: 144 RDRLYCERKFPDNYVKYI 161
             +           +  +
Sbjct: 269 PVKAKPVTTSESAVISTV 286


>gi|228475674|ref|ZP_04060392.1| conserved membrane protein YtnM [Staphylococcus hominis SK119]
 gi|314935495|ref|ZP_07842847.1| putative membrane protein [Staphylococcus hominis subsp. hominis
           C80]
 gi|228270456|gb|EEK11891.1| conserved membrane protein YtnM [Staphylococcus hominis SK119]
 gi|313656060|gb|EFS19800.1| putative membrane protein [Staphylococcus hominis subsp. hominis
           C80]
          Length = 291

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 89/261 (34%), Gaps = 28/261 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +A FL+  + G  G+G G       S      GI  +I       T       T+
Sbjct: 4   LFIFALAGFLAQLVDGSLGMGFGA----SSSSILLTYGIAPAIV----SATVHFSEIATT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H +   ++   +        I+  + + +++ +   ++    A+F L MG  +L
Sbjct: 56  AASGTSHWKFENVHKPTMLKLAIPGSISGFIGAALLTQIHGDYIKPYIALFLLSMGFYIL 115

Query: 143 KRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKA 195
            +      + F        +      G V GFL    G G G     L+L  +      A
Sbjct: 116 YQFLFKRHKDFHTHVGTLSSVKLVPQGAVAGFLDAIGGGGWGPVNTPLLLASHKIQPRYA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF--VNIGAVLIILPISILITPLATK 253
             T +     +     L  I             LGF  +N   V+ +    ++  P++  
Sbjct: 176 IGTVSASEFFVTLSTSLSFIIF-----------LGFTQINWWFVIALSIGGMIAAPISAY 224

Query: 254 LSYMIGKKYLTIGFSMIMFTT 274
           L+ ++    L I    ++  T
Sbjct: 225 LTKILPINILAICVGGLIIFT 245


>gi|86146442|ref|ZP_01064765.1| hypothetical protein MED222_12543 [Vibrio sp. MED222]
 gi|85835705|gb|EAQ53840.1| hypothetical protein MED222_12543 [Vibrio sp. MED222]
          Length = 259

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 87/266 (32%), Gaps = 28/266 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F +G +  + G GGG++ VP L            +  H+A+GT+      
Sbjct: 7   TMLVILALVAFAAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + R      +   +      I   + +L +  +   +L K   +  L   + 
Sbjct: 58  ASSTAAFTYYRKKLFKPECWVNAFISTLIGATIGTLTVDAISTEWLEKVLPLVILAAAVY 117

Query: 141 MLKRDRLYCERKFPDNYVKYIW------GMVTGFLSGALGVGGGIF-TNLLMLFYGASIY 193
            +                  +       G + GF  G  G G G F T   M  Y  +I 
Sbjct: 118 TIFHKTPDVSHNVSPKPCPVLKRKQKYQGFILGFYDGVAGPGTGAFWTVSSMALYRLNIL 177

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+  S  ++    F +L+                LG ++    L +    +    +   
Sbjct: 178 LASGLSKAMNFTSNFTSLVTFAI------------LGHIDWVLGLTMGLCLMAGAFVGAH 225

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +   G  ++   F  ++   +   A
Sbjct: 226 SAIRFGATFIRPVFVTVVSVLAIKLA 251


>gi|20806629|ref|NP_621800.1| permease [Thermoanaerobacter tengcongensis MB4]
 gi|20515075|gb|AAM23404.1| predicted permease [Thermoanaerobacter tengcongensis MB4]
          Length = 277

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 82/244 (33%), Gaps = 41/244 (16%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + +  A+G S+  +  TS  + + + R    N++I         +  +  + +   +  
Sbjct: 39  GVDIRYAIGASIVSVIATSSGAAVAYVRDNITNLRIGMFLEIATTLGAITGAYIAGLISS 98

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV------------------------- 158
            +L   F +  L   + MLK+ +    +    + +                         
Sbjct: 99  KYLYIIFGLVLLYSALAMLKKRKEELPQNVISHPLAKKLNLEGSYFDKVLNKEVKYKVAG 158

Query: 159 ---KYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVR 214
               +    + G LSG LG+G G+F  L M LF    +  +TATS  +  + A  +  V 
Sbjct: 159 VYEAFGTMYLAGILSGLLGIGSGVFKVLAMDLFMKLPMKVSTATSNFMIGVTAAASAGVY 218

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +  G             +N      +    +L   L TK+   +    +   F  ++   
Sbjct: 219 LMRGT------------INPEIAGPVAIGVLLGATLGTKIMERLKNTTIRKIFIPVLIYI 266

Query: 275 SFVF 278
           S   
Sbjct: 267 SVQM 270



 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           +L+G LSGL G+G G+  V         M +   + M V+  TS  +I  T+  S   + 
Sbjct: 167 YLAGILSGLLGIGSGVFKV-------LAMDLFMKLPMKVSTATSNFMIGVTAAASAGVYL 219

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             GTIN +I       + +   + + ++  +  + + K F    + + + ML +
Sbjct: 220 MRGTINPEIAGPVAIGVLLGATLGTKIMERLKNTTIRKIFIPVLIYISVQMLIK 273


>gi|318077227|ref|ZP_07984559.1| hypothetical protein SSA3_11008 [Streptomyces sp. SA3_actF]
          Length = 268

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 10/215 (4%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
            + LFG GGG V VPV++     +G D    + VA  TS  V+   ++++ +        
Sbjct: 16  TTALFGFGGGFVTVPVITVVDAGLGGD---AVRVATATSALVMLVNALVATLAAPPRA-- 70

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD---RLYCERK 152
            ++     + +L +   + ++         L   F  +  +  + +L R    R      
Sbjct: 71  -LRGRWALLVLLGVGGALGAVAGRFAPGPVLRWGFVAYVGVTVVDLLARPGFLRPARTVA 129

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                +    G+  G ++  LGVGG + T  L+   GAS+  A A +  ++  I  PAL 
Sbjct: 130 GRRQALPTGLGLPIGAVASFLGVGGSVMTVPLLRRAGASMPVAAALANPLTLAIVAPALC 189

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           V +    G        +G V+I A L +L  S ++
Sbjct: 190 VSLLV-RGSTPAGAGLVGAVDIVAALSLLAGSTVV 223


>gi|254479289|ref|ZP_05092630.1| conserved domain protein, putative [Carboxydibrachium pacificum DSM
           12653]
 gi|214034764|gb|EEB75497.1| conserved domain protein, putative [Carboxydibrachium pacificum DSM
           12653]
          Length = 277

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 81/244 (33%), Gaps = 41/244 (16%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + +  A+G S+  +  TS  + + + R    N++I         +  +  + +   +  
Sbjct: 39  GVDIRYAIGASIVSVIATSSGAAVAYVRDNITNLRIGMFLEIATTLGAITGAYIAGLISS 98

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV------------------------- 158
            +L   F +  L   + MLK+ +    +    + +                         
Sbjct: 99  KYLYIIFGLVLLYSALAMLKKRKEELPQNVISHPLAKKLNLEGSYFDKVLNKEVKYKVAG 158

Query: 159 ---KYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVR 214
               +    + G LSG LG+G G F  L M LF    +  +TATS  +  + A  +  V 
Sbjct: 159 VYEAFGTMYLAGILSGLLGIGSGAFKVLAMDLFMKLPMKVSTATSNFMIGVTAAASAGVY 218

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +  G             +N      +    +L   L TK+   +    +   F  ++   
Sbjct: 219 LMRGT------------INPEIAGPVAIGVLLGATLGTKIMERLKNTTIRKIFIPVLIYI 266

Query: 275 SFVF 278
           S   
Sbjct: 267 SIQM 270



 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           +L+G LSGL G+G G   V         M +   + M V+  TS  +I  T+  S   + 
Sbjct: 167 YLAGILSGLLGIGSGAFKV-------LAMDLFMKLPMKVSTATSNFMIGVTAAASAGVYL 219

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             GTIN +I       + +   + + ++  +  + + K F    + + I ML +
Sbjct: 220 MRGTINPEIAGPVAIGVLLGATLGTKIMERLKNTTIRKIFIPVLIYISIQMLIK 273


>gi|127513412|ref|YP_001094609.1| hypothetical protein Shew_2484 [Shewanella loihica PV-4]
 gi|126638707|gb|ABO24350.1| protein of unknown function DUF81 [Shewanella loihica PV-4]
          Length = 257

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 98/263 (37%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++    F++G +  + G GGGL+ +P L       GI      H A+GT+    +  S 
Sbjct: 11  AILAATGFIAGFIDAIAG-GGGLLSIPALLTI----GIPP----HTALGTNKLAASFGSS 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+   + R      +          I  V+ + ++  +D  +L K   +F + + +  L 
Sbjct: 62  MAAFTYYRKQFFTPRFWYHASIATFIGAVIGTFVVYLIDNQWLEKWLPLFIIAVALYTLL 121

Query: 144 RDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
           +             K P  + ++  G+  GF  G  G   G F T   +  Y   +  + 
Sbjct: 122 KPNAMGCPTYEPPVKAPSKFKQWRQGIPLGFYDGFAGPATGAFWTISSVSQYKLPVLNSC 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++ +    +L V +            +LG VN+   L +    +L + +  + + 
Sbjct: 182 GLARAMTLISNLTSLSVFL------------ALGQVNLMVGLSMGLCMMLGSFIGARTAI 229

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F  I+   +   A
Sbjct: 230 KFGVPFIRPLFISIVILIAINLA 252


>gi|330900715|gb|EGH32134.1| hypothetical protein PSYJA_25490 [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 259

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 96/264 (36%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 9   LTTLAILAVVAFIAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     +    +   + +++  ++   +LN+   +     G+
Sbjct: 60  FGSATASFTFYRRKLFDPRQWLHAVLGTAVGAALGAVIAHYLPAEWLNQMLPVIVFGCGL 119

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G+  GF  G  G G G F T   +L Y   + KA
Sbjct: 120 YLLFGGTPKAPLDSNAPIKKKWQLPQGLGLGFYDGVAGPGTGAFWTVSTLLLYPVDLVKA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V I+SG        + +G       L +    +L        +
Sbjct: 180 SGVARSMNFVSNAVALSVFIFSGQ-----VDYIIG-------LSMGLAVMLGAYFGAGTA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 IKGGAKFIRPVFITVVLGLTVRLA 251


>gi|293376838|ref|ZP_06623057.1| putative membrane protein [Turicibacter sanguinis PC909]
 gi|325837282|ref|ZP_08166360.1| putative membrane protein [Turicibacter sp. HGF1]
 gi|292644532|gb|EFF62623.1| putative membrane protein [Turicibacter sanguinis PC909]
 gi|325491056|gb|EGC93351.1| putative membrane protein [Turicibacter sp. HGF1]
          Length = 259

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 92/260 (35%), Gaps = 30/260 (11%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              + I A   +G ++GL G+   +++ P+L         D       A+  +L      
Sbjct: 3   LYLVYIFAGIGAGVVTGLAGLSAAVIITPLLVSICGWKSYD-------AVTVALAADVLA 55

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS---LMISHVDKSFLNKAFAIFCLLMG 138
           S+++   + ++  I++K          + T+V S    + S      L     +  + +G
Sbjct: 56  SLLTAYTYYKNKNIDLKHGMLVAMTAFVGTIVGSYSGFLFSQSQPDGLGYISMLTTIFLG 115

Query: 139 ILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-G 189
           I  L +             +          I+G   G++ G  G GGGI    +   + G
Sbjct: 116 IKFLVKPIEEGHDAEAGLEQISKKKMIQAMIFGCGIGWICGFTGSGGGILMLTVFTLHLG 175

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
            ++  A  TS  +  L+A    +     G  +  +P           +L+++   ++   
Sbjct: 176 YNLKVAVGTSTMIMTLVALIGTISHFSMGASIQVIP-----------MLVVIICCVVAAY 224

Query: 250 LATKLSYMIGKKYLTIGFSM 269
           ++ K +     K L     M
Sbjct: 225 VSAKFANKCEIKTLNKVVGM 244


>gi|312621537|ref|YP_004023150.1| hypothetical protein Calkro_0431 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202004|gb|ADQ45331.1| protein of unknown function DUF81 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 276

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 56/289 (19%), Positives = 104/289 (35%), Gaps = 51/289 (17%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  I   S ++G +  L G+GGGL+++P LS  F+         MH A    L  +  T
Sbjct: 1   MIAEIFAVSIIAGFVGSLLGIGGGLIVIPFLSIVFKFN-------MHQAAAAGLVSVIAT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  +   + +    +++I         I  V+ +++   +    L+  F +  L    LM
Sbjct: 54  SSGAASAYVKDKLTHLRIGMFLQLATVIGGVLGAILSGILPAKVLSLIFGVLLLYNSFLM 113

Query: 142 LKRDRLYCERKFPDN-------------------------------YVKYIWGMVTGFLS 170
           +K  +   + +                                      ++  +  G LS
Sbjct: 114 IKNRKSDEKPQSSSFQISKWAKKLKLYGSYFDKIQNREIEYSAQNIAGGFLMMIFAGILS 173

Query: 171 GALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G LG+G GIF  L +          +TATS  +  + A  ++ + +  G  +        
Sbjct: 174 GLLGIGSGIFKVLALDTIMKLPFKVSTATSNFMMGVTALASISIYLARGDIVYD------ 227

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 A   +    +  + L  K+   I  KYL + F++++  TS   
Sbjct: 228 ------ACGAVAVGVLFGSLLGAKVMPYIKSKYLRVAFALVLIYTSIEM 270



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
             +G LSGL G+G G+  V  L    +L          V+  TS  ++  T++ S   + 
Sbjct: 167 IFAGILSGLLGIGSGIFKVLALDTIMKL-------PFKVSTATSNFMMGVTALASISIYL 219

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I           +   +++ + ++ ++   +L  AFA+  +   I M+K+
Sbjct: 220 ARGDIVYDACGAVAVGVLFGSLLGAKVMPYIKSKYLRVAFALVLIYTSIEMIKK 273


>gi|327192631|gb|EGE59572.1| putative permease protein [Rhizobium etli CNPAF512]
          Length = 288

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 90/272 (33%), Gaps = 56/272 (20%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G LSG+FGVGGG ++ P+L           +I   VA+ T    +  +S+   + H
Sbjct: 2   GAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPVVAVATGANQVVASSISGAITH 53

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGILML-- 142
            R GT+++K+    +        V   + S +        F++  + IF   +G LML  
Sbjct: 54  FRRGTLDVKLGTVLLVGGLSGATVGIWIFSLLRALGQLDLFISLLYVIFLGTVGGLMLLE 113

Query: 143 -----------------------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGAL 173
                                         + R    + F         G   G L+  +
Sbjct: 114 SINAMRRAARNEPPAPRKPGHQHWVHKLPLKVRFKKSKIFLSVIPIVALGFAIGILTSVM 173

Query: 174 GVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           GVGGG      M++           TS      +     +V+  + +            V
Sbjct: 174 GVGGGFIMVPAMIYLLRIPTNVVVGTSLYQIIFVTAYTTIVQAATNFS-----------V 222

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           +I    I++   ++      ++   +  + L 
Sbjct: 223 DIVLAFILMVAGVIGAQYGVRVGQKLRGEQLR 254



 Score = 43.1 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 8/124 (6%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           ++   L V   K  +   +  I+   F  G L+ + GVGGG +MVP +    +       
Sbjct: 138 VHKLPLKVRFKKSKIFLSVIPIVALGFAIGILTSVMGVGGGFIMVPAMIYLLR------- 190

Query: 65  ICMHVAMGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           I  +V +GTSL  I   T+  + ++   + ++++ +    +    I       +   +  
Sbjct: 191 IPTNVVVGTSLYQIIFVTAYTTIVQAATNFSVDIVLAFILMVAGVIGAQYGVRVGQKLRG 250

Query: 124 SFLN 127
             L 
Sbjct: 251 EQLR 254



 Score = 42.0 bits (98), Expect = 0.085,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 22/52 (42%)

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
            G   GFLSG  GVGGG     L++FY      A AT A      +    + 
Sbjct: 1   MGAAVGFLSGMFGVGGGFLITPLLIFYNIPPVVAVATGANQVVASSISGAIT 52


>gi|330503506|ref|YP_004380375.1| hypothetical protein MDS_2591 [Pseudomonas mendocina NK-01]
 gi|328917791|gb|AEB58622.1| hypothetical protein MDS_2591 [Pseudomonas mendocina NK-01]
          Length = 255

 Score = 69.7 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 75/218 (34%), Gaps = 17/218 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++GI   +   +A GT+L ++ P  +++   + +   IN++              + 
Sbjct: 31  AIPVLGIVFGLDQQLAQGTALVMVVPNVMLAIWRYHQRNRINLRHALLLGITSFFCAWLA 90

Query: 115 SLMISHVDKSFLNKAFAIF----CLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           SL    VD   +  AF  F         + ML                  + G V+G + 
Sbjct: 91  SLYAVEVDSRTMRWAFVGFLLALAAYNLLRMLMAQAPASGELRHHWGWFGVLGGVSGAMG 150

Query: 171 GALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G  GVGG +    ++   +GA+   A   S  ++       LL                 
Sbjct: 151 GLFGVGGAVVATPVLTSVFGATQVVAQGLSLSLALPSTGVTLLTYAMHQ----------- 199

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
             VN    + +    +L      +L++ + ++ L   F
Sbjct: 200 -HVNWWMGMPLAVGGLLSISWGVRLAHSLPERLLRSLF 236



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
              V   +SG + GLFGVGG +V  PVL+  F    +       VA G SL +  P++ +
Sbjct: 138 WFGVLGGVSGAMGGLFGVGGAVVATPVLTSVFGATQV-------VAQGLSLSLALPSTGV 190

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           + + +  H  +N  +         ++      +   + +  L   F  F
Sbjct: 191 TLLTYAMHQHVNWWMGMPLAVGGLLSISWGVRLAHSLPERLLRSLFCGF 239


>gi|315231826|ref|YP_004072262.1| hypothetical protein TERMP_02065 [Thermococcus barophilus MP]
 gi|315184854|gb|ADT85039.1| hypothetical protein TERMP_02065 [Thermococcus barophilus MP]
          Length = 246

 Score = 69.7 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 91/256 (35%), Gaps = 26/256 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I   FL G L GL G+GGG +M P L            I   +A+GT L     T +  
Sbjct: 4   FIFLGFLVGFLVGLTGIGGGALMTPSLIFL--------GIEPLMAVGTDLLYATVTRIFG 55

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS----FLNKAFAIFCLLMGILM 141
              H R G+I   +            ++ S+++  +DKS    +L     +  ++     
Sbjct: 56  VFFHHRKGSIRFDLALRLFAGSLPAILLGSVLLRVIDKSTLNNYLTLLLGVILVVSSFFS 115

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSA 200
           L +   +   + P     Y+ G + G       VG G+  +  LM     S  +    + 
Sbjct: 116 LVKGEFHVPIR-PRREYLYLLGFIVGLTVQFTSVGAGVIVSFALMNLAKLSPREVVGVTI 174

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                ++F + L   + G     L             L+++  ++    L T ++  + +
Sbjct: 175 FYGLPLSFLSALNYAFLGSTNYHL------------ALLLIAGTLPGVYLGTHVNRKVDR 222

Query: 261 KYLTIGFSMIMFTTSF 276
             L    ++I+     
Sbjct: 223 DKLKRVINVIILVIGL 238


>gi|163787704|ref|ZP_02182151.1| hypothetical protein FBALC1_04157 [Flavobacteriales bacterium
           ALC-1]
 gi|159877592|gb|EDP71649.1| hypothetical protein FBALC1_04157 [Flavobacteriales bacterium
           ALC-1]
          Length = 265

 Score = 69.7 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 7/121 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI +   + G L+G+ G GGG +++P L            + M  A+GTSL +IA  S++
Sbjct: 150 LIAIEGVVVGILTGIVGAGGGFLIIPALVLL-------AKLPMKKAVGTSLLIIAAKSLI 202

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            F+    +  I+   L  +  +     ++       +    L K F  F LLM I +L +
Sbjct: 203 GFLGDLSNIEIDWSFLLIFTTISIFGIILGVYASKFISGKKLKKGFGYFTLLMAIYILYK 262

Query: 145 D 145
           +
Sbjct: 263 E 263



 Score = 66.2 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 52/250 (20%), Positives = 93/250 (37%), Gaps = 37/250 (14%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP+L     L  I        A   SL V+  TS++   ++ + G +++K    +  
Sbjct: 28  ILTVPILVYLIGLNPI-------TATAYSLFVVGVTSIIGAFKNFKKGLVDIKTAVIFAI 80

Query: 106 VLPITTVVT-SLMISHVDK-------------SFLNKAFAIFCLLMGILMLKRDRLYCER 151
              I   +T   ++  + +              F+   FAI  LL    M+K+ +   + 
Sbjct: 81  PAFIAVYLTRRFLVPMIPEIMFTINDFEVTNNIFIMVFFAIIMLLASFSMIKKKKHSNDE 140

Query: 152 KFP---DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIA 207
           +     +  +  I G+V G L+G +G GGG      ++      + KA  TS     +IA
Sbjct: 141 EQDIHYNYPLIAIEGVVVGILTGIVGAGGGFLIIPALVLLAKLPMKKAVGTSL---LIIA 197

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
             +L+  +     +          ++   +LI   ISI    L    S  I  K L  GF
Sbjct: 198 AKSLIGFLGDLSNIE---------IDWSFLLIFTTISIFGIILGVYASKFISGKKLKKGF 248

Query: 268 SMIMFTTSFV 277
                  +  
Sbjct: 249 GYFTLLMAIY 258


>gi|302130179|ref|ZP_07256169.1| hypothetical protein PsyrptN_02225 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
          Length = 259

 Score = 69.7 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 96/264 (36%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +FL+G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 9   LTTLAILAVVAFLAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     I    +   + +++  ++   +LN+   +     G+
Sbjct: 60  FGSATASFTFYRRKLFHPRQWLHAIVGTAVGAALGAIIAHYLPAEWLNQMLPVIVFGCGL 119

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G+  GF  G  G G G F T   +L Y   + KA
Sbjct: 120 YLLFGGTPKAPLDSDAPIKKKWQLPQGLGLGFYDGVAGPGTGAFWTVSTLLMYPVDLVKA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V I+SG        + +G       L +    +L        +
Sbjct: 180 SGVARSMNFVSNIVALSVFIFSGQ-----VDYIIG-------LTMGLAVMLGAYFGAGTA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 IKGGAKFIRPVFITVVLGLTVRLA 251


>gi|302517379|ref|ZP_07269721.1| integral membrane protein [Streptomyces sp. SPB78]
 gi|302426274|gb|EFK98089.1| integral membrane protein [Streptomyces sp. SPB78]
          Length = 264

 Score = 69.7 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 10/215 (4%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
            + LFG GGG V VPV++     +G D    + VA  TS  V+   ++++ +        
Sbjct: 22  TTALFGFGGGFVTVPVITVVDAGLGGD---AVRVATATSALVMLVNALVATLTAPPRA-- 76

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD---RLYCERK 152
            ++     + +L +   + ++         L   F  +  +  + +L R    R      
Sbjct: 77  -LRGRWALLVLLGVGGALGAVAGRFAPGPVLRWGFVAYVGVTVVDLLARPGFLRPARTVA 135

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                +    G+  G ++  LGVGG + T  L+   GAS+  A A +  ++  I  PAL 
Sbjct: 136 GRRQALPTGLGLPIGAVASFLGVGGSVMTVPLLRRAGASMPVAAALANPLTLAIVAPALC 195

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           V +    G        +G V+I A L +L  S ++
Sbjct: 196 VSLLV-RGSTPAGAGLVGAVDIVAALSLLAGSTVV 229


>gi|27365445|ref|NP_760973.1| hypothetical protein VV1_2112 [Vibrio vulnificus CMCP6]
 gi|37680514|ref|NP_935123.1| permease [Vibrio vulnificus YJ016]
 gi|320155829|ref|YP_004188208.1| hypothetical protein VVM_01933 [Vibrio vulnificus MO6-24/O]
 gi|27361593|gb|AAO10500.1| hypothetical protein VV1_2112 [Vibrio vulnificus CMCP6]
 gi|37199262|dbj|BAC95094.1| predicted permease [Vibrio vulnificus YJ016]
 gi|319931141|gb|ADV86005.1| hypothetical protein VVMO6_00983 [Vibrio vulnificus MO6-24/O]
          Length = 260

 Score = 69.7 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 93/267 (34%), Gaps = 29/267 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+      
Sbjct: 7   TMLVVLALVAFIAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + R      +          +   + +L +  +   +L K   +  L   I 
Sbjct: 58  ASSTAAFTYYRKRLFKPQCWLRAFAATLVGATLGTLFVDAISTEWLEKILPLIILAAAIY 117

Query: 141 MLKRDRLYCERKFPD-------NYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASI 192
            +                    N  +++ G   GF  G  G G G F T   M  Y  +I
Sbjct: 118 TIWHKTPESAHNSTTPEPCPMLNKKQFVQGATLGFYDGVAGPGTGAFWTVSSMALYKLNI 177

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A+  +  ++      +L++  +            LG +N G  LI+    +    +  
Sbjct: 178 LLASGLAKAMNFTSNITSLVMFAF------------LGHINWGLGLIMGVCLMAGAFVGA 225

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             +   G K++   F  ++   +   A
Sbjct: 226 HSAIRFGAKFIRPVFVTVVSILAMKLA 252


>gi|261210500|ref|ZP_05924793.1| hypothetical protein VCJ_000752 [Vibrio sp. RC341]
 gi|260840285|gb|EEX66856.1| hypothetical protein VCJ_000752 [Vibrio sp. RC341]
          Length = 249

 Score = 69.7 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 90/263 (34%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+       S 
Sbjct: 1   MVLALVAFIAGFIDAVAG-GGGMLTVPALLSL--------GLPPHLALGTNKLAATFASS 51

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   + R         K       I  +V +L +  +   +L K   +  L   +  + 
Sbjct: 52  TAAWTYYRQKLFTPACWKRAFIATLIGAIVGTLAVDAISTEWLRKVLPLVILAAALYSVW 111

Query: 144 RDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
                 E+             + + G+  GF  G  G G G F T   M  Y  +I  A+
Sbjct: 112 HRPQNSEQNTTPKPCPKLHRKQILQGLGLGFYDGLAGPGTGAFWTVSSMALYRFNILFAS 171

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++      +L+                LG ++    L +    +    +    + 
Sbjct: 172 GLAKAMNLTSNLTSLVTFAI------------LGHIDWLLGLTMGLCLMAGAFVGAHSAI 219

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F +++   +   A
Sbjct: 220 RFGAPFIRPLFVLVVTLLAGKLA 242


>gi|222530175|ref|YP_002574057.1| hypothetical protein Athe_2210 [Caldicellulosiruptor bescii DSM
           6725]
 gi|222457022|gb|ACM61284.1| protein of unknown function DUF81 [Caldicellulosiruptor bescii DSM
           6725]
          Length = 276

 Score = 69.7 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 59/289 (20%), Positives = 106/289 (36%), Gaps = 51/289 (17%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  I   S ++G +  L G+GGGL+++P LS  F+         MH A    L  +  T
Sbjct: 1   MIAEIFAVSIIAGFVGSLLGIGGGLIVIPFLSIVFKFN-------MHQAAAAGLVSVIAT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  +   + +    +++I         I  V+ +++   +    L+  F I  L    LM
Sbjct: 54  SSGAASAYVKDKLTHLRIGMFLQLATVIGGVLGAILSGILPAKVLSLIFGILLLYNSFLM 113

Query: 142 LKRDRLYCERKFPDNYV--------------------------KYIWGMVT-----GFLS 170
           +K  +   + +     +                          + I G  +     G LS
Sbjct: 114 IKNRKSDEKPQPSSLQISKWAKKLKLYGSYFDKIQNREIEYSAQNIAGGFSMMIFAGILS 173

Query: 171 GALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G LG+G GIF  L +          +TATS  +  + A  ++ + +  G  +        
Sbjct: 174 GLLGIGSGIFKVLALDTIMKLPFKVSTATSNFMMGVTALASISIYLARGDIVYD------ 227

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 A   +    +  + L  K+   I  KYL + F++++  TS   
Sbjct: 228 ------ACGAVAVGVLFGSLLGAKVMPYIKSKYLRVAFALVLIYTSIEM 270



 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
             +G LSGL G+G G+  V  L    +L          V+  TS  ++  T++ S   + 
Sbjct: 167 IFAGILSGLLGIGSGIFKVLALDTIMKL-------PFKVSTATSNFMMGVTALASISIYL 219

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I           +   +++ + ++ ++   +L  AFA+  +   I M+K+
Sbjct: 220 ARGDIVYDACGAVAVGVLFGSLLGAKVMPYIKSKYLRVAFALVLIYTSIEMIKK 273


>gi|255532049|ref|YP_003092421.1| hypothetical protein Phep_2155 [Pedobacter heparinus DSM 2366]
 gi|255345033|gb|ACU04359.1| protein of unknown function DUF81 [Pedobacter heparinus DSM 2366]
          Length = 312

 Score = 69.7 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 89/242 (36%), Gaps = 23/242 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            ++   F +  + G  G+G G+V     +      G++ ++      G+       +S  
Sbjct: 67  WMLAVGFFAQLVDGALGMGYGVVS----TTLLLSGGLNPAVI----SGSIHTAEMFSSGA 118

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD---KSFLNKAFAIFCLLMGILM 141
           S   H R G +N K+ K  +    +  +  +L++S+       ++    +I+ LL+GI +
Sbjct: 119 SGFSHYRFGNVNKKLFKTLLIPGVLGAIAGALLLSYAGEAFSQWIRPVISIYTLLLGIRI 178

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L        +        ++ G   GFL    G G G      ++  G +      + + 
Sbjct: 179 LSNAFKAKTKPQKVKRAGWLAGAG-GFLDSFGGGGWGPLVTSTLISKGRTPKYVIGSVSL 237

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
               +   + +   +            LG  +  +++ ++   ++  P+A  L   +  K
Sbjct: 238 TEFFVTMASAVTFFFV-----------LGVSHWQSIVGLIVGGVVAAPIAANLVGKLPIK 286

Query: 262 YL 263
            +
Sbjct: 287 KM 288


>gi|229168389|ref|ZP_04296113.1| hypothetical protein bcere0007_33460 [Bacillus cereus AH621]
 gi|228615033|gb|EEK72134.1| hypothetical protein bcere0007_33460 [Bacillus cereus AH621]
          Length = 245

 Score = 69.7 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         + + + S   S +   
Sbjct: 29  IPIHVALATSLTAMAFTTLSGVVSHYREGNVVLVIGGVVGGFGALGSYIGSKFGSLIPAH 88

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV-----------KYIWGMVTGFLSGAL 173
            L+   A    L  I M  R  ++ +R                      G+VTG L+GA 
Sbjct: 89  LLHWFTAGMLFLSAIFMFIRLIMFQKRSQSSLNGHKELSKDNVIKCIFLGLVTGILAGAF 148

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA                    S G++
Sbjct: 149 GIGSAPFIQLGLMVLLGLTIRQSVGTTMLVILPIAIGGGFGYS------------SEGYL 196

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   ++ +L  ++L   +  K +    +  L   FSMIM
Sbjct: 197 DYVLLVQVLIGTMLGAYIGAKFTNYAPRMLLR--FSMIM 233



 Score = 38.9 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 42/107 (39%), Gaps = 7/107 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D +   I    ++G L+G FG+G    +   L            + +  ++GT++ VI P
Sbjct: 129 DNVIKCIFLGLVTGILAGAFGIGSAPFIQLGLMVLL-------GLTIRQSVGTTMLVILP 181

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            ++     +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 182 IAIGGGFGYSSEGYLDYVLLVQVLIGTMLGAYIGAKFTNYAPRMLLR 228


>gi|28869908|ref|NP_792527.1| hypothetical protein PSPTO_2721 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213967053|ref|ZP_03395203.1| membrane protein [Pseudomonas syringae pv. tomato T1]
 gi|301385238|ref|ZP_07233656.1| hypothetical protein PsyrptM_21487 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302063293|ref|ZP_07254834.1| hypothetical protein PsyrptK_25204 [Pseudomonas syringae pv. tomato
           K40]
 gi|28853153|gb|AAO56222.1| membrane protein, putative [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213928375|gb|EEB61920.1| membrane protein [Pseudomonas syringae pv. tomato T1]
 gi|330875140|gb|EGH09289.1| hypothetical protein PSYMP_09210 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|331014362|gb|EGH94418.1| hypothetical protein PLA106_00635 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 259

 Score = 69.3 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 96/264 (36%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 9   LTTLAILAVVAFVAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     I    +   + +++  ++   +LN+   +     G+
Sbjct: 60  FGSATASFTFYRRKLFHPRQWLHAIVGTAVGAALGAIIAHYLPAEWLNQMLPVIVFGCGL 119

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G+  GF  G  G G G F T   +L Y   + KA
Sbjct: 120 YLLFGGTPKAPLDSDAPIKKKWQLPQGLGLGFYDGVAGPGTGAFWTVSTLLMYPVDLVKA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V I+SG        + +G       L +    +L        +
Sbjct: 180 SGVARSMNFVSNIVALSVFIFSGQ-----VDYIIG-------LTMGLAVMLGAYFGAGTA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 IKGGAKFIRPVFITVVLGLTVRLA 251


>gi|54309521|ref|YP_130541.1| hypothetical protein PBPRA2354 [Photobacterium profundum SS9]
 gi|46913957|emb|CAG20739.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 256

 Score = 69.3 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 99/242 (40%), Gaps = 25/242 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D   + + L+ + + L+G +  + G GGG++ VP L       G+  +     A+ T+  
Sbjct: 2   DLSFEILGLLFLVAGLAGFIDAIAG-GGGMITVPALLAV----GVPPAQ----ALATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  S  + +   R+G +N+K +++ I    I + + ++++  +D   L     +  + 
Sbjct: 53  QGSFGSFSASLYFVRNGFVNLKDMRNAIVFTFIGSAIGAVLVQRIDAGVLTSLIPVLLVC 112

Query: 137 MGILMLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           + +  L      +     K  +N   +  G   GF  G  G G G    +  +      +
Sbjct: 113 ISLYFLFAPQTGKGGGTPKLSENAFAFSVGTSIGFYDGFFGPGAGSLFTVCFVAIAQFGL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++    F ALL  I +G     LP W +G       L++     +   +  
Sbjct: 173 VEATARTKILNFTSNFAALLFFIMAG-----LPIWEIG-------LLMAVGGFIGARMGA 220

Query: 253 KL 254
           K+
Sbjct: 221 KV 222



 Score = 40.4 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 13/121 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           + ++   + GF+    G GGG+ T   +L  G    +A AT+    +  +F A L  + +
Sbjct: 10  LLFLVAGLAGFIDAIAG-GGGMITVPALLAVGVPPAQALATNKLQGSFGSFSASLYFVRN 68

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                       GFVN+  +   +  + + + +   L   I    LT    +++   S  
Sbjct: 69  ------------GFVNLKDMRNAIVFTFIGSAIGAVLVQRIDAGVLTSLIPVLLVCISLY 116

Query: 278 F 278
           F
Sbjct: 117 F 117


>gi|52549457|gb|AAU83306.1| hypothetical protein GZ27E6_28 [uncultured archaeon GZfos27E6]
          Length = 247

 Score = 69.3 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 91/250 (36%), Gaps = 24/250 (9%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
              +G +SG+FG+GGG V +P+L+           + +  A G +L ++  +S++  +  
Sbjct: 14  GLFAGFMSGMFGIGGGAVRIPLLNLV--------GLPLLSAFGINLFIVPFSSLVGAVT- 64

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY- 148
            + G I  +I            ++ + +   +    L   F    L++   +     +  
Sbjct: 65  -QRGNIEKEIAIYLGVGGVFGAIIGAFLAGLIPTLILAVIFVALSLVIVFGLFLDRIVPA 123

Query: 149 -CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
              +    +   +        ++   G   G      +  +G  I++A ATS  V+    
Sbjct: 124 LAHKINLTHKSAFASSFFLSLMAAIRGGSAGSLFPAFLKAFGCDIHRAIATSLCVTIFTC 183

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
             A  +             WS G +     +  L  S++   L + +S      +L IG 
Sbjct: 184 IGAATIF------------WSRGDIIWLPAIFALIGSMVGARLGSAVSLKTKSVWLEIGL 231

Query: 268 SMIMFTTSFV 277
            +++   + +
Sbjct: 232 GILVVALALI 241


>gi|227820754|ref|YP_002824724.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
 gi|227339753|gb|ACP23971.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
          Length = 308

 Score = 69.3 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 98/286 (34%), Gaps = 56/286 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + V+L    +   I +I+      G LSG+FGVGGG ++ P+L           +I   V
Sbjct: 1   MTVYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPVV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    +  +S+   + H R GTI++K+    +    +   +   + S +        
Sbjct: 53  AVATGANQVVASSISGAITHFRRGTIDIKLGTVLLCGGLVGATLGVWLFSLLRSIGQLDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            ++  + +    +G LML                                + R    + +
Sbjct: 113 VISLLYVVLLGSVGGLMLWESIGAMRKAARNQPTQLRRPGQHNWIHGLPLKMRFKKSKIY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G   G L+  +GVGGG      M++           TS      ++   ++
Sbjct: 173 LSVIPVATLGFSIGILTSIMGVGGGFIMVPAMIYLLRIPTSVVVGTSLFQIVFVSAYTVI 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           V+  + +            V+I    +++   ++      ++   +
Sbjct: 233 VQASTNYT-----------VDIVLAFVLMIAGVIGAQYGVRVGQRL 267


>gi|312877935|ref|ZP_07737878.1| protein of unknown function DUF81 [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311795285|gb|EFR11671.1| protein of unknown function DUF81 [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 276

 Score = 69.3 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 83/244 (34%), Gaps = 44/244 (18%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           MH +    L  +  TS  +   + +    +++I         I  V+ +++   +    L
Sbjct: 39  MHQSAAAGLVSVIATSSGAASAYVKDRLTHLRIGMFLQLATVIGGVLGAILSGFLPAKVL 98

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK--------------------------- 159
           +  F I  L    LM+K  +   + +     +                            
Sbjct: 99  SLIFGILLLYNSFLMIKNRKSDEKPQPSSLQISKWAKKLKLYGSYFDKIQNKEIEYSAQN 158

Query: 160 ----YIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVR 214
               ++   + G LSG LG+G GIF  L +          +TATS  +  + A  ++ + 
Sbjct: 159 ITGGFLMMTLAGILSGLLGIGSGIFKVLALDTIMKLPFKVSTATSNFMMGVTALASISIY 218

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +  G  +              A   +    ++ + +  +L   I  KYL   F++I+  T
Sbjct: 219 LARGDIVYD------------ACGAVAVGVLVGSAIGARLMPYIKSKYLRTAFALILIYT 266

Query: 275 SFVF 278
           S   
Sbjct: 267 SIEM 270



 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+G LSGL G+G G+  V  L    +L          V+  TS  ++  T++ S   +  
Sbjct: 168 LAGILSGLLGIGSGIFKVLALDTIMKL-------PFKVSTATSNFMMGVTALASISIYLA 220

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G I           + + + + + ++ ++   +L  AFA+  +   I M+++
Sbjct: 221 RGDIVYDACGAVAVGVLVGSAIGARLMPYIKSKYLRTAFALILIYTSIEMIRK 273


>gi|256042907|ref|ZP_05445853.1| hypothetical protein Bmelb1R_00395 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256112130|ref|ZP_05453058.1| hypothetical protein Bmelb3E_05507 [Brucella melitensis bv. 3 str.
           Ether]
 gi|260564141|ref|ZP_05834626.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|265989340|ref|ZP_06101897.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265993561|ref|ZP_06106118.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|260151784|gb|EEW86877.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|262764431|gb|EEZ10463.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263000009|gb|EEZ12699.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 289

 Score = 69.3 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 92/285 (32%), Gaps = 49/285 (17%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + VA+F +  L G+ G+  G+ +VP+L+  F        I +HVA+  SL  +   S 
Sbjct: 13  LWLFVAAFGASMLGGMLGMASGIFIVPLLTSIF-------GIDIHVAIAASLISVIACSC 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S     +    N+++         +       +I  +  ++L   FAI  +L    ML 
Sbjct: 66  GSAAPLLKERLTNIRLAVVLETATTLGAFTGVFLIGVIPTAYLYLMFAIILVLSAWQMLV 125

Query: 144 RDRLYCERKFPDN-----------------------------YVKYIWGMVTGFLSGALG 174
           R R   +   P +                              +        G +S  LG
Sbjct: 126 RRREMPQTNRPASRTWATLLRLHSAVPDRSSGKFTSYQVGSLPLGLSLMYGAGLVSALLG 185

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G+     M       I  ++A S  +  +    +                +  G +N
Sbjct: 186 IGSGVLKIPAMDTALRLPIKVSSAASNFMIGVTGAASAGAY------------FMRGDIN 233

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 +   S+L      ++   I    L I F +++   +   
Sbjct: 234 TAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAIAM 278


>gi|329923611|ref|ZP_08279055.1| putative membrane protein [Paenibacillus sp. HGF5]
 gi|328941164|gb|EGG37463.1| putative membrane protein [Paenibacillus sp. HGF5]
          Length = 255

 Score = 69.3 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 83/227 (36%), Gaps = 26/227 (11%)

Query: 54  KAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV 113
               ++ +     +H A+GT+L  +  +S+   + H R G + ++              V
Sbjct: 27  FIISILTVVFGYPIHTALGTALAAMFFSSLSGSVSHYREGNMVLRTGAVVGLAGAAGAWV 86

Query: 114 TSLMISHVDKSFLNKAFAIFCLLMGI----LMLKRDRLYCERKFPDNYV---------KY 160
           +S   S + +  L    +      G+     ML   R     +     +           
Sbjct: 87  SSGWSSLIPEDQLGFMTSGMLFASGLALWFRMLYVSRRSQASEVSAPPIVQGFRYWLQAL 146

Query: 161 IWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           + G++TG LSG  G+G   F  + LML  G S+  A  T+  V   IA            
Sbjct: 147 LIGLITGALSGLFGIGSTPFIQIGLMLVLGMSLRFAAGTTMLVIMPIALAGGAGY----- 201

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
                  +S+G++++  +  ++  ++  + +  K +  +   +L   
Sbjct: 202 -------FSIGYLDVQLLAAVVVGTMSGSYVGAKFTKRVPVVWLKTC 241


>gi|222147475|ref|YP_002548432.1| hypothetical protein Avi_0602 [Agrobacterium vitis S4]
 gi|221734465|gb|ACM35428.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 307

 Score = 69.3 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 46/294 (15%), Positives = 98/294 (33%), Gaps = 57/294 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I +I+      G LSG+FGVGGG ++ P+L           +I   VA+ T    +  +S
Sbjct: 14  IFIILGMGAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPVVAVATGANQVVASS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLM 137
           V   M H R G++++K+    +        +   +   + K      F++  + +    +
Sbjct: 66  VSGAMSHFRRGSLDLKLGGVLLVGGLFGASLGMWIFVALRKLGQIDLFISILYVVLLGSI 125

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R    + +       + G + 
Sbjct: 126 GTLMLWESIGALRRAARKQPAPVRRPGHHNWVHRLPFKMRFKKSKIYLSAIPILVLGFLV 185

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G L   +G+GGG      M++           TS      ++    + +  + +      
Sbjct: 186 GVL-TPMGIGGGFILVPAMIYLLRIPTNVVVGTSLFQIIFVSAFTTIAQAKANYS----- 239

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                 V+I    +++   ++      ++   +  + L     +++       A
Sbjct: 240 ------VDIVLAFMLMIAGVIGAQYGVRVGQKLRGEQLRALLGLLVMAVGLRLA 287


>gi|289827499|ref|ZP_06546111.1| hypothetical protein Salmonellentericaenterica_17312 [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
          Length = 252

 Score = 69.3 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 94/233 (40%), Gaps = 25/233 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             + + L+G +  + G GGGL+ +P L        +   +    A+ T+       S+ S
Sbjct: 1   CFLFAVLAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGGSLSS 51

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            +   R   +N+   K  I +  I ++  +L++ HV    L +   I  + +G+  L   
Sbjct: 52  SLYFIRRKVVNLAEQKLNILMTFIGSMSGALLVQHVQADILRQILPILVIFIGLYFLLMP 111

Query: 146 RLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAG 201
           +L  E   R+        I G   GF  G  G   G F  L  +   G ++ K+TA +  
Sbjct: 112 KLGEEDRQRRLYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGYNLAKSTAHAKV 171

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           ++A      LL+ I  G  +     W+ GFV       +L    L   + ++L
Sbjct: 172 LNATSNVGGLLLFIIGGKVI-----WATGFV-------MLVGQFLGARMGSRL 212


>gi|15598653|ref|NP_252147.1| hypothetical protein PA3457 [Pseudomonas aeruginosa PAO1]
 gi|9949599|gb|AAG06845.1|AE004766_6 hypothetical protein PA3457 [Pseudomonas aeruginosa PAO1]
          Length = 250

 Score = 69.3 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 80/212 (37%), Gaps = 14/212 (6%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+G SLG +A ++++  +   R G +  + +         +  V   +   V +  L  A
Sbjct: 44  AIGVSLGAVALSALIGAIPRARQGQVAWRPVLVLALAGLPSNAVGQWLGRFVPEGVLIVA 103

Query: 130 FAIFCLLMGILMLKRDRLY-CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F +  L     M +   +         +      G+  G LSG +GVGGG      +L++
Sbjct: 104 FCLLVLWSAWRMWRGAGMKREASDQARSLPLLGIGLAVGLLSGLMGVGGGFLVVPGLLWF 163

Query: 189 G-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
              S+  ATATS  V AL++    L+ +        L            +  +     + 
Sbjct: 164 TPLSMMAATATSMAVIALVSGGGFLIYLTGAHPPLPL------------LGGLAAGGAVG 211

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                 L+  +G   L   F++++   SF  A
Sbjct: 212 VLGGNLLAQRLGGPTLQRLFALMLVAVSFSLA 243



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++      G LSGL GVGGG ++VP L     L        M  A  TS+ VIA  S   
Sbjct: 134 LLGIGLAVGLLSGLMGVGGGFLVVPGLLWFTPL-------SMMAATATSMAVIALVSGGG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           F+ +       + +L        +  +  +L+   +    L + FA+  + +  
Sbjct: 187 FLIYLTGAHPPLPLLGGLAAGGAVGVLGGNLLAQRLGGPTLQRLFALMLVAVSF 240


>gi|116051477|ref|YP_789690.1| hypothetical protein PA14_19390 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218890343|ref|YP_002439207.1| putative transmembrane protein [Pseudomonas aeruginosa LESB58]
 gi|254242143|ref|ZP_04935465.1| hypothetical protein PA2G_02872 [Pseudomonas aeruginosa 2192]
 gi|296388026|ref|ZP_06877501.1| putative transmembrane protein [Pseudomonas aeruginosa PAb1]
 gi|115586698|gb|ABJ12713.1| putative transmembrane protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126195521|gb|EAZ59584.1| hypothetical protein PA2G_02872 [Pseudomonas aeruginosa 2192]
 gi|218770566|emb|CAW26331.1| putative transmembrane protein [Pseudomonas aeruginosa LESB58]
          Length = 250

 Score = 69.3 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 80/212 (37%), Gaps = 14/212 (6%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+G SLG +A ++++  +   R G +  + +         +  V   +   V +  L  A
Sbjct: 44  AIGVSLGAVALSALIGAIPRARQGQVAWRPVLVLALAGLPSNAVGQWLGRFVPEGVLIVA 103

Query: 130 FAIFCLLMGILMLKRDRLY-CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F +  L     M +   +         +      G+  G LSG +GVGGG      +L++
Sbjct: 104 FCLLVLWSAWRMWRGAGMKREASDQARSLPLLGIGLAVGLLSGLMGVGGGFLVVPGLLWF 163

Query: 189 G-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
              S+  ATATS  V AL++    L+ +        L            +  +     + 
Sbjct: 164 TPLSMMAATATSMAVIALVSGGGFLIYLTGAHPPLPL------------LGGLAAGGAVG 211

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                 L+  +G   L   F++++   SF  A
Sbjct: 212 VLGGNLLAQRLGGPTLQRLFALMLVAVSFSLA 243



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++      G LSGL GVGGG ++VP L     L        M  A  TS+ VIA  S   
Sbjct: 134 LLGIGLAVGLLSGLMGVGGGFLVVPGLLWFTPL-------SMMAATATSMAVIALVSGGG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           F+ +       + +L        +  +  +L+   +    L + FA+  + +  
Sbjct: 187 FLIYLTGAHPPLPLLGGLAAGGAVGVLGGNLLAQRLGGPTLQRLFALMLVAVSF 240


>gi|261419879|ref|YP_003253561.1| hypothetical protein GYMC61_2481 [Geobacillus sp. Y412MC61]
 gi|261376336|gb|ACX79079.1| protein of unknown function DUF81 [Geobacillus sp. Y412MC61]
          Length = 288

 Score = 69.3 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 91/259 (35%), Gaps = 26/259 (10%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +   F++  + G  G+  G V    L   F +     S  +H+A          T+  S 
Sbjct: 1   MFVGFIAQLIDGSLGMAYG-VTSSTLLLTFGIAPAVASASVHLAE-------VVTTAASG 52

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             H + G ++ ++    I    +   V +  +S++    +    ++F L +G  ++ R  
Sbjct: 53  ASHWKFGNVDRRMAFRLIIPGSVGAFVGACFLSNLPGDLIKPYVSLFLLALGFYIIYRFL 112

Query: 147 LYCERKFPDNYVKYI------WGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATS 199
           +   R       ++        G+V GFL    G G G     ++L        K   T 
Sbjct: 113 VLNGRAPSTPGKQWSNKQLVPLGLVAGFLDATGGGGWGPIATPVLLANKSMEARKVVGTV 172

Query: 200 AGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 +A  A L  + S GW            VN   VL ++   I+  P+A  L   +
Sbjct: 173 DTSEFAVALSATLGFVISLGWEQ----------VNWYWVLTLMAGGIVAAPIAAWLVRKL 222

Query: 259 GKKYLTIGFSMIMFTTSFV 277
               L +    ++  T+  
Sbjct: 223 PSHLLGVLVGGLIILTNVR 241



 Score = 40.1 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 47/138 (34%), Gaps = 4/138 (2%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++    ++G L    G G G +  PVL     +    ++  +   + TS   +A ++ + 
Sbjct: 131 LVPLGLVAGFLDATGGGGWGPIATPVLLANKSM----EARKVVGTVDTSEFAVALSATLG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           F+       +N   +   +    +   + + ++  +    L        +L  +  L   
Sbjct: 187 FVISLGWEQVNWYWVLTLMAGGIVAAPIAAWLVRKLPSHLLGVLVGGLIILTNVRTLLHA 246

Query: 146 RLYCERKFPDNYVKYIWG 163
                  +P  Y   + G
Sbjct: 247 WEAPAPVYPTVYGLIVIG 264


>gi|138895146|ref|YP_001125599.1| hypothetical protein GTNG_1484 [Geobacillus thermodenitrificans
           NG80-2]
 gi|134266659|gb|ABO66854.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 305

 Score = 69.3 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 92/263 (34%), Gaps = 26/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +   F++  + G  G+  G+     L   F +     S  +H+A          T+
Sbjct: 14  LIVFVFVGFIAQLIDGSLGMAYGVTST-TLLLTFGIAPAVASASVHLAE-------VVTT 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H + G I+  ++   I    +   V +  +S++    +    ++F L +G  ++
Sbjct: 66  AASGVSHWKFGNIDRDMVVKLIIPGSVGAFVGACFLSNLPGDLIKPCISLFLLALGFYII 125

Query: 143 KRDRLYCERKFPDNYVKYI------WGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKA 195
            R      R    +  ++        G+  GFL    G G G     ++L        K 
Sbjct: 126 YRFLFLNGRSSSKSKKQWSNKQLIPLGLTAGFLDATGGGGWGPIATPILLANKSTEARKV 185

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             T       IA  A L    S GW            VN   VL ++   I+  P+A  L
Sbjct: 186 IGTVDTSEFAIALSATLGFAISLGWEQ----------VNWYWVLTLMAGGIVAAPIAAWL 235

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +    L +    ++  T+  
Sbjct: 236 VRKLPSHLLGVLVGGLIILTNAR 258



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 43/138 (31%), Gaps = 4/138 (2%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I     +G L    G G G +  P+L          ++  +   + TS   IA ++ + 
Sbjct: 148 LIPLGLTAGFLDATGGGGWGPIATPILL----ANKSTEARKVIGTVDTSEFAIALSATLG 203

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           F        +N   +   +    +   + + ++  +    L        +L     L   
Sbjct: 204 FAISLGWEQVNWYWVLTLMAGGIVAAPIAAWLVRKLPSHLLGVLVGGLIILTNARTLLHA 263

Query: 146 RLYCERKFPDNYVKYIWG 163
                  +P  Y   + G
Sbjct: 264 WEVPAPVYPTVYGLIVIG 281


>gi|291559792|emb|CBL38592.1| Predicted permeases [butyrate-producing bacterium SSC/2]
          Length = 258

 Score = 69.3 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 103/266 (38%), Gaps = 25/266 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  I +   A   +G  +G  G+    V+ P+L    ++          +A+G +L   
Sbjct: 3   ILLTIAVTFFAGMGAGLGTGFAGMSAAAVISPMLITFLKMDPY-------MAVGIALSSD 55

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              S +S   + ++  +++K     +  +   TVV S + S +  + +         L+G
Sbjct: 56  VLASAVSAYIYGKNKNLDIKNGIIMMISVLTFTVVGSYIASLLPAATMGSFSVFMTFLLG 115

Query: 139 ILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
           I  + R  +  +        K       + G++ G + G +G GGG+   L++    G  
Sbjct: 116 IKFIVRPVMTTKEAMQGVSAKKRAIQSVVCGIMIGLICGFVGAGGGMMMLLILTSVLGYE 175

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           +  A  TS  + A  AF   +      + + G P W++        ++ +  +++   +A
Sbjct: 176 LKTAVGTSVFIMAFTAFTGAVSH----FMIVGAPDWTV-------FILCIVFTLIGARIA 224

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + +     + L     +I+     V
Sbjct: 225 ARFANKATPETLNRATGVILVILGIV 250



 Score = 41.6 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 8/117 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +V   + G + G  G GGG++M+ +L+             +  A+GTS+ ++A T+    
Sbjct: 143 VVCGIMIGLICGFVGAGGGMMMLLILTSVL-------GYELKTAVGTSVFIMAFTAFTGA 195

Query: 87  MEHRRH-GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + H    G  +  +    I    I   + +   +      LN+A  +  +++GI++L
Sbjct: 196 VSHFMIVGAPDWTVFILCIVFTLIGARIAARFANKATPETLNRATGVILVILGIVVL 252


>gi|255655972|ref|ZP_05401381.1| hypothetical protein CdifQCD-2_09804 [Clostridium difficile
           QCD-23m63]
 gi|296450599|ref|ZP_06892352.1| membrane protein [Clostridium difficile NAP08]
 gi|296879282|ref|ZP_06903277.1| membrane protein [Clostridium difficile NAP07]
 gi|296260443|gb|EFH07285.1| membrane protein [Clostridium difficile NAP08]
 gi|296429825|gb|EFH15677.1| membrane protein [Clostridium difficile NAP07]
          Length = 250

 Score = 69.3 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 100/254 (39%), Gaps = 27/254 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  + +  FL+  +  + G GGGL+ +PVL            + +H+A+GT+    +   
Sbjct: 4   IIFLCIGGFLAAFVDSIAG-GGGLISMPVLMAI--------GVPVHLAIGTNKFAASAGC 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   + + G +N  +LK  +    + +++    +  + +  LN    +  L++ I   
Sbjct: 55  ISSAYRYAKSGKVNNDLLKKLVPFTIVGSILGVRCVLSISEDILNVLVVVMILIVAIYTF 114

Query: 143 KRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
               L  E  F      +  +  +   + GF  G  G G G F     +  YG     A+
Sbjct: 115 TSKNLGQEDNFESINNKNLRLGMLMAFIMGFYDGFFGPGTGTFLTFGFIKIYGYDFLHAS 174

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++      +LL+ + +G             V+    ++   + I+   +  K++ 
Sbjct: 175 ANTKILNLTSNITSLLLFMINGQ------------VDYKIAIVFALVMIMGAYIGAKVAI 222

Query: 257 MIGKKYLTIGFSMI 270
             G K +   F ++
Sbjct: 223 KKGSKMIKPIFLVM 236


>gi|107102990|ref|ZP_01366908.1| hypothetical protein PaerPA_01004059 [Pseudomonas aeruginosa PACS2]
          Length = 250

 Score = 69.3 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 80/212 (37%), Gaps = 14/212 (6%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+G SLG +A ++++  +   R G +  + +         +  V   +   V +  L  A
Sbjct: 44  AIGVSLGAVALSALIGAIPRARQGQVAWRPVLVLALAGLPSNAVGQWLGRFVPEGVLIVA 103

Query: 130 FAIFCLLMGILMLKRDRLY-CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F +  L     M +   +         +      G+  G LSG +GVGGG      +L++
Sbjct: 104 FCLLVLWSAWRMWRGAGMKHEASDQARSLPLLGIGLAVGLLSGLMGVGGGFLVVPGLLWF 163

Query: 189 G-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
              S+  ATATS  V AL++    L+ +        L            +  +     + 
Sbjct: 164 TPLSMMAATATSMAVIALVSGGGFLIYLTGAHPPLPL------------LGGLAAGGAVG 211

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                 L+  +G   L   F++++   SF  A
Sbjct: 212 VLGGNLLAQRLGGPTLQRLFALMLVAVSFSLA 243



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++      G LSGL GVGGG ++VP L     L        M  A  TS+ VIA  S   
Sbjct: 134 LLGIGLAVGLLSGLMGVGGGFLVVPGLLWFTPL-------SMMAATATSMAVIALVSGGG 186

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           F+ +       + +L        +  +  +L+   +    L + FA+  + +  
Sbjct: 187 FLIYLTGAHPPLPLLGGLAAGGAVGVLGGNLLAQRLGGPTLQRLFALMLVAVSF 240


>gi|86608140|ref|YP_476902.1| hypothetical protein CYB_0652 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556682|gb|ABD01639.1| putative membrane protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 285

 Score = 69.3 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 104/279 (37%), Gaps = 33/279 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + +   ++G L+G+ G+GGG+++VP+        GI        A  TS   I  TS+
Sbjct: 3   LALAIGGLVAGILAGVLGIGGGVILVPLQVSL----GIPPVQ----AAATSNLSIVMTSI 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              +++ R G +++K +        +T  V +++ S +    L  AF +  L    L+  
Sbjct: 55  AGSIQNWRMGMLDLKRVILLGIPALLTAQVGAIIASRLPSYLLLAAFGVLLLANTYLVQL 114

Query: 144 RDRL--------------------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
             ++                        +      + + G   G L+G  G+GGG+    
Sbjct: 115 NKKVVIQAQELGADVSGAEHLSGTESSGQMSPWLARALTGGTAGLLAGLFGIGGGVILVP 174

Query: 184 L-MLFYGASIYKATATSAGVSALIAFPALLVRIYSG---WGLNGLPPWSL-GFVNIGAVL 238
           + +L    +I  A  TS G   + A  A           W   G    ++   V     L
Sbjct: 175 MQILLLKETIKVAIQTSLGAIVITAVAATASHAGLSDWIWNGLGFGDGTIHQNVLWIPGL 234

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           I+    ++   ++T+    +  + +++ F   +   S  
Sbjct: 235 ILGTGGLIGVQISTRTLPKLPDETVSLLFRGFLAILSLY 273



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 50/132 (37%), Gaps = 23/132 (17%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +    +G L+GLFG+GGG+++VP+     +         + VA+ TSLG I  T+V + 
Sbjct: 151 ALTGGTAGLLAGLFGIGGGVILVPMQILLLKE-------TIKVAIQTSLGAIVITAVAAT 203

Query: 87  MEHRR----------------HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
             H                  H  +             I   +++  +  +    ++  F
Sbjct: 204 ASHAGLSDWIWNGLGFGDGTIHQNVLWIPGLILGTGGLIGVQISTRTLPKLPDETVSLLF 263

Query: 131 AIFCLLMGILML 142
             F  ++ + + 
Sbjct: 264 RGFLAILSLYIF 275


>gi|218709060|ref|YP_002416681.1| hypothetical protein VS_1066 [Vibrio splendidus LGP32]
 gi|218322079|emb|CAV18159.1| hypothetical protein VS_1066 [Vibrio splendidus LGP32]
          Length = 259

 Score = 69.3 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 86/266 (32%), Gaps = 28/266 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F +G +  + G GGG++ VP L            +  H+A+GT+      
Sbjct: 7   TMLVILALVAFAAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + R      +          I   + +L +  +   +L K   +  L   + 
Sbjct: 58  ASSTAAFTYYRKKLFKPECWVSAFISTLIGATIGTLTVDAISTEWLEKVLPLVILAAAVY 117

Query: 141 MLKRDRLYCERKFPDNYVKYIW------GMVTGFLSGALGVGGGIF-TNLLMLFYGASIY 193
            +                  +       G + GF  G  G G G F T   M  Y  +I 
Sbjct: 118 TIFHKTPDVSHNVSPKPCPVLKRKQKYQGFILGFYDGVAGPGTGAFWTVSSMALYRLNIL 177

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+  S  ++    F +L+                LG ++    L +    +    +   
Sbjct: 178 LASGLSKAMNFTSNFTSLVTFAI------------LGHIDWVLGLTMGLCLMAGAFVGAH 225

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +   G  ++   F  ++   +   A
Sbjct: 226 SAIRFGATFIRPVFVTVVSVLAIKLA 251


>gi|327398711|ref|YP_004339580.1| hypothetical protein Hipma_0550 [Hippea maritima DSM 10411]
 gi|327181340|gb|AEA33521.1| protein of unknown function DUF81 [Hippea maritima DSM 10411]
          Length = 259

 Score = 69.3 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 80/203 (39%), Gaps = 11/203 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + +  V  + +  L  + G+GGG+V VPV+       G D      VA+   L +  
Sbjct: 5   VSILGITFVIIWATSFLFAMLGLGGGMVYVPVMKWL----GFDLKT---VAIPLGLLLNG 57

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             + ++ +   +   I+ K    +     I   + +  +  +    +   F I  L   +
Sbjct: 58  LNTGLAMIPFHKAKLIDYKGALPFALAAIIGAPLGAYTVQFIPTRIVLILFIIAVLTAAV 117

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMV----TGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            +    +   E    +   + I+G +     GF++G LG+GGG     +++  G    +A
Sbjct: 118 KVFISTKAPDEDNLIEFKKRAIYGGLSGLLIGFVAGMLGIGGGFLAAPILMSMGYGAIRA 177

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
            AT+A +    +    L  +  G
Sbjct: 178 AATTAYIVTFSSASGFLGHVAEG 200


>gi|312113365|ref|YP_004010961.1| hypothetical protein Rvan_0583 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311218494|gb|ADP69862.1| protein of unknown function DUF81 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 263

 Score = 69.3 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 71/205 (34%), Gaps = 15/205 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L   +  L G + GL G GG ++ VP+L     +         H+A+GTS   +A +++
Sbjct: 5   ILAFGSGALVGFVLGLIGGGGSVLAVPLLVYVVGVK------SPHIAIGTSAIAVALSAL 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + ++H R   +  +    +         + S +    D   L   F I  +++ + M  
Sbjct: 59  FNLVQHARARNVKWQCASVFAIAGVAGAFLGSSIGKAFDGQKLLLLFGIVMIVIAVFMAT 118

Query: 144 RD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYK 194
           +         +L              +G   G LSG  G+GGG      +M      +  
Sbjct: 119 KKGTMGSPNVKLTSASAQRLLPRLSSYGFGVGTLSGFFGIGGGFLVVPGIMAATDMPMLA 178

Query: 195 ATATSAGVSALIAFPALLVRIYSGW 219
           A  +S                 SG 
Sbjct: 179 AVGSSLVSVTAFGLTTAANYAVSGL 203


>gi|288957804|ref|YP_003448145.1| hypothetical protein AZL_009630 [Azospirillum sp. B510]
 gi|288910112|dbj|BAI71601.1| hypothetical protein AZL_009630 [Azospirillum sp. B510]
          Length = 268

 Score = 69.3 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 81/202 (40%), Gaps = 13/202 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + ++     L+G +  + G GGGL+ +P L  A         +    A+ T     + 
Sbjct: 7   ESLGILFAVGLLAGFVDSIAG-GGGLLTIPALLAA--------GLSPAEALATGKLQSSF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S+ + ++  R G ++   ++  I    +     + ++  +D SFL     I  + + + 
Sbjct: 58  GSLSATVKFVRRGEVHPGSMRTMILCTFVGAGAGATLVQMLDPSFLRDVIPILLIGIALY 117

Query: 141 MLKRDR---LYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
           +L   +   +   ++  ++      G   GF  G  G G G  F    +   G ++ KAT
Sbjct: 118 LLLSPKAGDVDAHQRIGEHAFALSVGTGIGFYDGFFGPGTGTFFAIAFVSLLGHNLRKAT 177

Query: 197 ATSAGVSALIAFPALLVRIYSG 218
           A +  ++      +LL  I  G
Sbjct: 178 AHTKVLNLTSNVASLLFFIVGG 199



 Score = 36.2 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 47/120 (39%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           + +  G++ GF+    G GGG+ T   +L  G S  +A AT    S+  +  A +  +  
Sbjct: 11  ILFAVGLLAGFVDSIAG-GGGLLTIPALLAAGLSPAEALATGKLQSSFGSLSATVKFVRR 69

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G             V+ G++  ++  + +       L  M+   +L     +++   +  
Sbjct: 70  GE------------VHPGSMRTMILCTFVGAGAGATLVQMLDPSFLRDVIPILLIGIALY 117


>gi|304398256|ref|ZP_07380130.1| protein of unknown function DUF81 [Pantoea sp. aB]
 gi|304354122|gb|EFM18495.1| protein of unknown function DUF81 [Pantoea sp. aB]
          Length = 267

 Score = 69.3 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 94/237 (39%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + L+ + + L+G +  + G GGGL+ VP L  A         +    A+ T+       
Sbjct: 10  LVGLLFLIAMLAGFIDSIAG-GGGLLTVPSLLAA--------GLSPAQALATNKLQSVGG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + +   R G + +      I +  + +V+ +++I  +   FL +   +F + +G+  
Sbjct: 61  SFSASLYFVRRGAVKLNEQWLNIAMTLMGSVLGAILIQRLQADFLRQMLPLFLIAIGLWF 120

Query: 142 LKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   RL      R+        + G   GF  G  G G G F  L  +   G ++ KATA
Sbjct: 121 LLMPRLGEVDQARRLHGLAYALVGGGAVGFYDGFFGPGAGSFYALAFVTLCGYNLAKATA 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++      +LL  ++ G             V  G  L+++  +     L  +L
Sbjct: 181 HAKVLNFTSNLGSLLFFMFGGK------------VVWGTGLVMMLGAFCGARLGARL 225


>gi|330835113|ref|YP_004409841.1| Predicted permease [Metallosphaera cuprina Ar-4]
 gi|329567252|gb|AEB95357.1| Predicted permease [Metallosphaera cuprina Ar-4]
          Length = 247

 Score = 68.9 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 94/255 (36%), Gaps = 24/255 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+   L G L G+ G  G L++VP L+                A+ +SL V   T+V  
Sbjct: 6   FIIIGVLVGALVGVTGSSGVLIVVPGLTLL--------GYRFQTAVSSSLIVDLITTVSV 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + + R+  + ++          I   + S +   ++   L   F  F  +M ++   R 
Sbjct: 58  VLTYFRYDNVRVRTGLLLGLGAVIGAQIGSRVAVMINPLPLEIGFTFFAAVMAVVSFLRS 117

Query: 146 RLYCERKFPDNYVK---YIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATATSAG 201
                ++    + +   ++  +  G L+G +G  GGI    ++M FY   + +   T+  
Sbjct: 118 SSISFKRVEVRFARVLSFLLSVSVGILTGTIGTSGGIMFIAIMMAFYNYGVKEMIGTATF 177

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              L A   +   + SG               + A ++I   ++++  +  K++  +   
Sbjct: 178 SMFLSALSGVSGYVASGVYD------------LDASVVIGSTALIVGTVFAKVANRMKPS 225

Query: 262 YLTIGFSMIMFTTSF 276
            +      +   T  
Sbjct: 226 TIYQILGSVFVITCI 240


>gi|323225683|gb|EGA09909.1| hypothetical protein SEEM0055_12408 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
          Length = 231

 Score = 68.9 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLVVLFFVAVLAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S +   R   +N+   K  I +  I ++  +L++ HV    L +   I  + +G+  
Sbjct: 65  SLSSSLYFIRRKVVNLAEQKLNILMTFIGSMSGALLVQHVQADILRQILPILVIFIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G   G F  L  +   G ++ K+TA
Sbjct: 125 LLMPKLGEEDRQRRLYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGYNLAKSTA 184

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++A      LL+ I  G  +     W+ GFV       +L    L   + ++L
Sbjct: 185 HAKVLNATSNVGGLLLFIIGGKVI-----WATGFV-------MLVGQFLGARMGSRL 229


>gi|255534255|ref|YP_003094626.1| hypothetical protein FIC_00088 [Flavobacteriaceae bacterium
           3519-10]
 gi|255340451|gb|ACU06564.1| conserved hypothetical transmembrane protein [Flavobacteriaceae
           bacterium 3519-10]
          Length = 266

 Score = 68.9 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 7/122 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++    L G ++GL G GGG ++VP L            + M  A+ TSL +IA  S+
Sbjct: 145 TILVSQGLLVGIVTGLIGAGGGFLIVPALVMLL-------GLNMKKAVATSLFIIAMNSL 197

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + F+   +    +   L  +  +  I   +   +   +D   L   F    L MG+ ++ 
Sbjct: 198 IGFLSTMKIVKHDWVFLLSFTSLSVIGIFIGLALSKRMDGRKLKPLFGWIVLAMGLFIIV 257

Query: 144 RD 145
           ++
Sbjct: 258 KE 259



 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 92/245 (37%), Gaps = 36/245 (14%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+    F    +        A   SL V+  TS++  +   + G I+ +    +     
Sbjct: 28  VPIFVYVFGFDAV-------TATALSLFVVGITSLVGSVGFIKQGQIDFRTALTFAIPSV 80

Query: 109 ITTVVTS-LMISHVDKSFLNK-------------AFAIFCLLMGILMLKRDRLYCERKFP 154
           +  + +  L++ H+    +N+              FAI  L+  I M++++     RK+ 
Sbjct: 81  LGVLFSRRLVLPHLPHYIINRWGITLTKDMFLLLLFAILMLIASIKMIRKNERPRLRKYD 140

Query: 155 DNYVKYIW--GMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPAL 211
           +     +   G++ G ++G +G GGG      L++  G ++ KA ATS  + A+ +    
Sbjct: 141 EVNYTILVSQGLLVGIVTGLIGAGGGFLIVPALVMLLGLNMKKAVATSLFIIAMNSLIGF 200

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           L  +                     +L    +S++   +   LS  +  + L   F  I+
Sbjct: 201 LSTMKIVKHD------------WVFLLSFTSLSVIGIFIGLALSKRMDGRKLKPLFGWIV 248

Query: 272 FTTSF 276
                
Sbjct: 249 LAMGL 253


>gi|317498868|ref|ZP_07957153.1| hypothetical protein HMPREF0996_02136 [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316893864|gb|EFV16061.1| hypothetical protein HMPREF0996_02136 [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 258

 Score = 68.9 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 103/266 (38%), Gaps = 25/266 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  I +   A   +G  +G  G+    V+ P+L    ++          +A+G +L   
Sbjct: 3   ILLTIAVTFFAGMGAGLGTGFAGMSAAAVISPMLITFLKMDPY-------MAVGIALSSD 55

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              S +S   + ++  +++K     +  +   TVV S + S +  + +         L+G
Sbjct: 56  VLASAVSAYIYGKNKNLDIKNGIIMMISVLTFTVVGSYIASLLPAATMGSFSVFMTFLLG 115

Query: 139 ILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
           I  + R  +  +        K       + G++ G + G +G GGG+   L++    G  
Sbjct: 116 IKFIVRPVMTTKEAMQGVSAKKRAIQSVVCGIMIGLICGFVGAGGGMMMLLILTSVLGYE 175

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           +  A  TS  + A  AF   +      + + G P W++        ++ +  +++   +A
Sbjct: 176 LKTAVGTSVFIMAFTAFTGAVSH----FMIVGAPDWTV-------FILCVVFTLIWARIA 224

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + +     + L     +I+     V
Sbjct: 225 ARFANKATPETLNRATGVILVILGIV 250



 Score = 38.9 bits (90), Expect = 0.92,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 52/117 (44%), Gaps = 8/117 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +V   + G + G  G GGG++M+ +L+             +  A+GTS+ ++A T+    
Sbjct: 143 VVCGIMIGLICGFVGAGGGMMMLLILTSVL-------GYELKTAVGTSVFIMAFTAFTGA 195

Query: 87  MEHRRH-GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + H    G  +  +    +    I   + +   +      LN+A  +  +++GI++L
Sbjct: 196 VSHFMIVGAPDWTVFILCVVFTLIWARIAARFANKATPETLNRATGVILVILGIVVL 252


>gi|293390057|ref|ZP_06634391.1| inner membrane protein YfcA [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290950591|gb|EFE00710.1| inner membrane protein YfcA [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 255

 Score = 68.9 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 107/264 (40%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + ++   +F++G +  + G GGGL+ +P L            +   VA+GT+     
Sbjct: 5   IDILAILFAVAFIAGFIDAIAG-GGGLITIPALLM--------TGLPPAVALGTNKLQAC 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  + +   R   +    +   + ++ + ++  +++I  +D S + K      L++GI
Sbjct: 56  GGSFSASLYFLRQRAVKFSEVWLILLMIFLGSIAGTILIQLIDASLIKKILPFLILVIGI 115

Query: 140 LMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
             L   +L  E   ++       +  G   GF  G  G G G I +   +   G ++ KA
Sbjct: 116 YFLVTPKLGDEDRKQRLSYPVFAFCIGTFMGFYDGFFGPGTGSIMSLACVTLLGFNLAKA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           TA +  ++      +L+  +  G  L     W++G       LI+L    +   L  K+ 
Sbjct: 176 TAHAKVMNFTSNLASLIFFLIGGQIL-----WTVG-------LIMLAGQFIGANLGAKMV 223

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              GK  +     ++ F  +   A
Sbjct: 224 MTKGKTLIRPMVVVMSFIMTVKMA 247


>gi|78777362|ref|YP_393677.1| hypothetical protein Suden_1164 [Sulfurimonas denitrificans DSM
           1251]
 gi|78497902|gb|ABB44442.1| Protein of unknown function DUF81 [Sulfurimonas denitrificans DSM
           1251]
          Length = 246

 Score = 68.9 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 79/193 (40%), Gaps = 9/193 (4%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++     GTLSG FG+GGG ++VP+L              +  A+G S+  +  +S+  
Sbjct: 4   LLLLGVGVGTLSGFFGIGGGTILVPLLLFL--------GYQIKDAIGISVVQMVFSSIYG 55

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              + ++  +++ ++            ++  ++S ++  FL   F  F       +  + 
Sbjct: 56  SYLNNKNKNLDVAMVVTIGIGGFCGAFLSGFIVSSINDKFLEIIFLAFASFALYRLFAKT 115

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSA 204
            +    +  +  +  + G++ G  S  +GVGG I    +++ F    + +A +       
Sbjct: 116 VINQTPRSVNRVLLLVIGVILGTFSMLIGVGGSILLVPILVGFLHVDLKRAISAGLFFVV 175

Query: 205 LIAFPALLVRIYS 217
             +   L+    S
Sbjct: 176 FSSVAGLISHSLS 188



 Score = 38.9 bits (90), Expect = 0.85,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 7/99 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L++V   + GT S L GVGG +++VP+L            + +  A+   L  +  +SV
Sbjct: 127 VLLLVIGVILGTFSMLIGVGGSILLVPILVGFLH-------VDLKRAISAGLFFVVFSSV 179

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
              + H     I+            I   +   +   VD
Sbjct: 180 AGLISHSLSREIDFFSGIIIGLASLIGVYIGVYLKDRVD 218


>gi|57865853|ref|YP_190055.1| hypothetical protein SERP2513 [Staphylococcus epidermidis RP62A]
 gi|57636511|gb|AAW53299.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
 gi|302749954|gb|ADL64131.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. JKD6008]
          Length = 209

 Score = 68.9 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 74/171 (43%), Gaps = 2/171 (1%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P +     L+GI  +   ++A G +   +  +++   +  R+    + K++      + I
Sbjct: 28  PAILILPPLIGI-PAYSAYIASGLTSSQVFFSTLSGSLNARKQPAFSPKLVIYMGGGMLI 86

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            +++ +++ S  + +F+N  + I  +L  ILM  + +   +       +  I G   G +
Sbjct: 87  GSMLGAILASLFNATFVNTVYVIIAILALILMFIKVKPTTQETKSKPLLFIIVGFGIGVI 146

Query: 170 SGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           SG +G GG      ++L  +   +      S  ++ + +  A  +++  G+
Sbjct: 147 SGIVGAGGAFIIIPVLLALFKLPMNTVVNNSIAIAFISSVGAFFIKLMQGY 197


>gi|78062270|ref|YP_372178.1| hypothetical protein Bcep18194_B1420 [Burkholderia sp. 383]
 gi|77970155|gb|ABB11534.1| protein of unknown function DUF81 [Burkholderia sp. 383]
          Length = 283

 Score = 68.9 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 87/271 (32%), Gaps = 49/271 (18%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + VA+F +  L G+ G+  G+ +VP+L+  F        + +  A+G S+  +   S 
Sbjct: 4   LWLFVAAFGASALGGVLGMASGIFVVPLLTLLF-------GVSIQTAIGASIVSVIACSC 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                  +   +N+++            +   L+I  V  SFL   FA+  ++    ML 
Sbjct: 57  SGAASFLKGRLVNVRLAIVLETATTFGALAGVLLIGRVPTSFLYALFAVILVVSAKQMLA 116

Query: 144 RDRLYCERKFPDN-----------------------------YVKYIWGMVTGFLSGALG 174
           R         PD                                     +  G +S  LG
Sbjct: 117 RRHEAPADGPPDAASWASTLRLHASFPDPASGREIGYQVGRVPFGMALMVGAGLISALLG 176

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G+     M       I  ++ATS  +  + A  +                   G ++
Sbjct: 177 IGSGVLKIPAMDTALRLPIKVSSATSNFMIGVTAAASAGAYFAR------------GDID 224

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLT 264
           I     I   S++   +  +L   +    L 
Sbjct: 225 IRLAGPIALGSVIGAIVGARLLIRLPADKLR 255


>gi|27363674|ref|NP_759202.1| putative permease [Vibrio vulnificus CMCP6]
 gi|27359790|gb|AAO08729.1| Predicted permease [Vibrio vulnificus CMCP6]
          Length = 251

 Score = 68.9 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 97/260 (37%), Gaps = 24/260 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +   S ++ TL+ L G G GL+  P+L       G+        A+ T         V
Sbjct: 7   LFLFFGSLIANTLASLAGGGAGLLQFPLLIFLGLPFGV--------ALATHKLASVALGV 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   H R G I + +    +F   I  V+ + ++  +             L +GI    
Sbjct: 59  GAAYSHFRSGKIPLSVAAYLVFTGSIGVVIGAHLVLMIPSDIAEILLGTMILALGIYSRF 118

Query: 144 RDRLYCERKFPDNYVK-YIWGMV----TGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
           + +L    +  + +++ +++G +     G ++G+L    G+   L ++ ++G    +A A
Sbjct: 119 KKQLGQHEQPRNRHLQGWLFGGIGLMLIGVINGSLTASSGLLVTLFLVRWFGYDYKQAVA 178

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +            +   ++G G   +       V+   + I+L  S L   L   ++  
Sbjct: 179 LTLIC---------VGFFWNGIGGIAVVQAGA-PVHWPWLPILLASSFLGGALGAWMTNR 228

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
              + + I F ++ F     
Sbjct: 229 YSNRTVKIAFELLTFAVGLK 248


>gi|134102247|ref|YP_001107908.1| membrane permease protein [Saccharopolyspora erythraea NRRL 2338]
 gi|291003791|ref|ZP_06561764.1| membrane permease protein [Saccharopolyspora erythraea NRRL 2338]
 gi|133914870|emb|CAM04983.1| conserved hypothetical membrane permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 249

 Score = 68.9 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 83/244 (34%), Gaps = 28/244 (11%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G   GL G GG ++ VP L              +  A+  SL V+A +S+   +   R  
Sbjct: 3   GLCVGLLGAGGSILAVPALVY-------GAGQPLESAIPVSLAVVALSSLAGLLPRERWT 55

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
                I   +  V        + +     + +L   FA    ++ + ML+    Y     
Sbjct: 56  QARWHIAAVFGVVGVPGAFAGTALGELFPQRWLMLGFAALMAVVAVRMLRHGDEYSGTCM 115

Query: 154 PDN---------YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVS 203
                             G+V G L+G  GVGGG      M L  G S  +A ATS  V 
Sbjct: 116 TPRGEVIWRICLPKSAAVGLVVGVLTGLFGVGGGFVVVPAMSLLMGLSTRQAVATSLVVV 175

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            L +   LL    +              ++   V      +++    A +L+  +  + +
Sbjct: 176 FLNSTGGLLAHARTAVE-----------IDYPVVPAFGCAAVVFALAAGRLTARLPARAV 224

Query: 264 TIGF 267
             GF
Sbjct: 225 RRGF 228


>gi|114331231|ref|YP_747453.1| hypothetical protein Neut_1235 [Nitrosomonas eutropha C91]
 gi|114308245|gb|ABI59488.1| protein of unknown function DUF81 [Nitrosomonas eutropha C91]
          Length = 259

 Score = 68.9 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 53/272 (19%), Positives = 99/272 (36%), Gaps = 37/272 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
                A   +G + GL GVGGG +M P+L   F        I    A+ T L   A T +
Sbjct: 4   WSYAAAGTFTGFIIGLTGVGGGALMTPILLLFF-------GISPTTAVATDLWFAAITKI 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH----VDKSFLNKAFAIFCLLMGI 139
                H  +G ++ +++K           +  L+IS     V   +L K   I  L+  I
Sbjct: 57  AGARIHHTNGNVDWQVVKRLWAGSLPMASLIVLLISMGTHIVKVDWLTKGIGIVVLVTAI 116

Query: 140 LMLKRDRL-----------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF- 187
            +L   RL               K     +    G + G       VG G+  ++++L+ 
Sbjct: 117 GLLVAPRLIAFAKRKQIGQPERFKTMQAVLTIFAGAILGVCVALTSVGAGVLGSVMLLYL 176

Query: 188 --YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                + ++  AT    +  +A  A L  +++G     +            ++ +L  SI
Sbjct: 177 YPLRITPHRLVATEIVHAIPLAIIAGLGYLFAGMVDGEM------------LISLLAGSI 224

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                 +KL+  I  +++    ++++      
Sbjct: 225 PAVIAGSKLASRITGQWIRFALAIVLAAAGLK 256


>gi|34557549|ref|NP_907364.1| hypothetical protein WS1179 [Wolinella succinogenes DSM 1740]
 gi|34483266|emb|CAE10264.1| conserved hypothetical protein [Wolinella succinogenes]
          Length = 252

 Score = 68.9 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 96/248 (38%), Gaps = 24/248 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + ++ + +F++G +  + G GGGL+ +P L       GI  +     A+GT+     
Sbjct: 5   VGILVILGLCAFVAGFVDSIAG-GGGLITIPALLAV----GIPPAQ----ALGTNKLQAT 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  + +   R G I +  +K  I  + I + V ++ +  +D + L++      +   +
Sbjct: 56  FGSFSATLYFWRRGYIELAEMKGAILAVFIASSVGTIFVQFIDAAILSRVIPFLLIGFAL 115

Query: 140 LMLKRDRLYCE--RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
             L   ++  E  +++       +   V GF  G  G G G  F  + +   G  I  AT
Sbjct: 116 YFLFSPKVSNEGSKRYLGALGMALAAGVVGFYDGFFGPGTGSFFAVVFVALGGYGITHAT 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++      +LL     G             V     L++     L   L ++ + 
Sbjct: 176 ANAKLLNFTSNVASLLFFALGGK------------VLWIIGLVMAIGQYLGARLGSRAAV 223

Query: 257 MIGKKYLT 264
             G + + 
Sbjct: 224 KHGARIIK 231


>gi|90422261|ref|YP_530631.1| hypothetical protein RPC_0741 [Rhodopseudomonas palustris BisB18]
 gi|90104275|gb|ABD86312.1| protein of unknown function DUF81 [Rhodopseudomonas palustris
           BisB18]
          Length = 308

 Score = 68.9 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 101/307 (32%), Gaps = 56/307 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + LI+      G +SG+FG+GGG +M P+L            I   V
Sbjct: 1   MQLYLPIADIPVNVLLILAMGAAVGFVSGMFGIGGGFLMTPLLIFI--------GIAPAV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL------------M 117
           A+ +    +A +S+   + + R   I+  +    +    I T +               +
Sbjct: 53  AVASVTSHMAASSLSGALSYWRRRAIDPALALVLLCGGLIGTALGVWFFTLMRSLGQLDL 112

Query: 118 ISHVDKSFLNKAFAIFCLLMGILMLKRD------------------------RLYCERKF 153
           +  +    L  A     +  G+  + R                         R    + +
Sbjct: 113 VIALSYVVLLTAVGGLMVWEGLRAILRTRRGDIVQPKRSGNRNWIHALPLKMRFKRSKMY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                  + G+V GF+   +GVGGG     ++++           TS  ++      A +
Sbjct: 173 LSVIPVVVIGLVIGFIGAVMGVGGGFILVPILIYLLRVPTSTVIGTSMVLTLFTMLIATV 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           +   +   ++ +             LI++   +       +    I  + L +   +++ 
Sbjct: 233 LHAVTNHLVDAVLA-----------LILMIGGVTGAQFGARAGQRIRGEQLRLLLGLLIL 281

Query: 273 TTSFVFA 279
                FA
Sbjct: 282 AVGVRFA 288


>gi|255029392|ref|ZP_05301343.1| hypothetical protein LmonL_10303 [Listeria monocytogenes LO28]
          Length = 250

 Score = 68.9 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 88/261 (33%), Gaps = 48/261 (18%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++ P L+  F        I +  A+G S+  +  TS  S + + + G  N+++       
Sbjct: 1   IVTPALTLIF-------GIDIQYAIGASIISVIATSSGSAIAYIKDGITNLRVGMFLEIA 53

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR---------------------- 144
             I  +  + +   +  + L   F +  L     M+K+                      
Sbjct: 54  TTIGAITGAFVSGLLSATALYIIFGLLLLYSAFNMIKKVGTEFPTNVKPDPLATKLNLHD 113

Query: 145 ------DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATA 197
                  R   + +  +    +      G  SG LG+G G F  + + +F    +  ++A
Sbjct: 114 SYYDKSLRQTVDYQVANVPAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSA 173

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS  +  + A  +  V ++ G     +               +    ++   L T++   
Sbjct: 174 TSNLMMGVTAAASATVYLFQGDIQPAI------------AAPVAIGVLVGATLGTRIMQR 221

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +  K + I F  ++   +F  
Sbjct: 222 LKSKVIRIIFIPVILYVAFQM 242



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  SGL G+G G   V         + +   + + V+  TS  ++  T+  S   +   
Sbjct: 141 AGIASGLLGIGSGAFKV-------MALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQ 193

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           G I   I       + +   + + ++  +    +   F    L +   M+ 
Sbjct: 194 GDIQPAIAAPVAIGVLVGATLGTRIMQRLKSKVIRIIFIPVILYVAFQMIL 244


>gi|322418530|ref|YP_004197753.1| hypothetical protein GM18_1001 [Geobacter sp. M18]
 gi|320124917|gb|ADW12477.1| protein of unknown function DUF81 [Geobacter sp. M18]
          Length = 278

 Score = 68.9 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 83/259 (32%), Gaps = 48/259 (18%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L+  F        + M  A+  S   I  TS  + +   R    N ++         
Sbjct: 31  VPALTLGF-------GMPMRTAVAASTVCIIATSTGAAVAFLRDRLTNTRVAIWLEMGTA 83

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV---------- 158
              +  +L+ + V++  L   F          M +  +   + +   + +          
Sbjct: 84  TGALTGALVAALVNQRLLFILFGALLSYSAYNMFRTRKEQQKPEVVPDAISRKLRLKGSY 143

Query: 159 --------------KYIWGMVT----GFLSGALGVGGGIFTNLLM-LFYGASIYKATATS 199
                         + + G++     G  +G LG+G GIF    M    G     ++ATS
Sbjct: 144 YDKALGRRVDYQVTRTLHGLIIMYFSGAAAGLLGIGAGIFKVPAMDQVMGMPFKASSATS 203

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +  + A    +V    G     + P   G V +G +L           L  +L   + 
Sbjct: 204 NFMIGVTAASGAVVYFARG----DVKPLVAGPVVLGVLLG--------AILGARLMMRMN 251

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              + + F  I+  T+   
Sbjct: 252 ANKIRLFFMPILAYTAIEM 270



 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 46/117 (39%), Gaps = 7/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++  + SG  +GL G+G G+  VP + +          +    +  TS  +I  T+    
Sbjct: 163 LIIMYFSGAAAGLLGIGAGIFKVPAMDQVM-------GMPFKASSATSNFMIGVTAASGA 215

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + +   G +   +    +  + +  ++ + ++  ++ + +   F        I M+ 
Sbjct: 216 VVYFARGDVKPLVAGPVVLGVLLGAILGARLMMRMNANKIRLFFMPILAYTAIEMIY 272


>gi|218295094|ref|ZP_03495930.1| protein of unknown function DUF81 [Thermus aquaticus Y51MC23]
 gi|218244297|gb|EED10822.1| protein of unknown function DUF81 [Thermus aquaticus Y51MC23]
          Length = 247

 Score = 68.9 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 16/230 (6%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL                 A+  SL ++   +++  + +   G ++ + +  +     
Sbjct: 27  VPVLVYLLGEYP-------KQAIAESLLIVGGIALLGAIPYALRGLVDWRNILFFGLPGM 79

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
             T + + +   V        FA+  +L    M +   L   +K    +   + G   G 
Sbjct: 80  AGTYLGAWLSQFVSGQVQLLTFALVMILAAYFMARPTPLRPTQK-RQAWKIVLEGTAVGA 138

Query: 169 LSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           L+G +GVGGG      ++   G  ++ A  TS  + AL +F      ++      GL   
Sbjct: 139 LTGFVGVGGGFLIVPALVLLGGLPMHLAVGTSLLIIALKSFAGFYKYLHL-LPAQGLS-- 195

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               VN     + + +  L + L  +++  +  + L  GF++ +      
Sbjct: 196 ----VNFTVAGLFVLVGALGSLLGGRVAVRLPHEALKRGFALFLVVMGVY 241



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 63/125 (50%), Gaps = 12/125 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I++     G L+G  GVGGG ++VP L            + MH+A+GTSL +IA  S   
Sbjct: 129 IVLEGTAVGALTGFVGVGGGFLIVPALVLL-------GGLPMHLAVGTSLLIIALKSFAG 181

Query: 86  FMEH-----RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           F ++      +  ++N  +   ++ V  + +++   +   +    L + FA+F ++MG+ 
Sbjct: 182 FYKYLHLLPAQGLSVNFTVAGLFVLVGALGSLLGGRVAVRLPHEALKRGFALFLVVMGVY 241

Query: 141 MLKRD 145
           ++ ++
Sbjct: 242 IVAQN 246


>gi|94984949|ref|YP_604313.1| hypothetical protein Dgeo_0842 [Deinococcus geothermalis DSM 11300]
 gi|94555230|gb|ABF45144.1| protein of unknown function DUF81 [Deinococcus geothermalis DSM
           11300]
          Length = 262

 Score = 68.9 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 104/262 (39%), Gaps = 26/262 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D +   +  +FL+G +  + G GGG + +P L      MG+  +      + T+  +   
Sbjct: 18  DVLLYGLPLAFLAGFIDAVAG-GGGTITLPTLFF----MGLSPAQT----VATNKLLAIF 68

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +++ R G +   ++   + +  + + + + ++  V+ +       +  L +G+L
Sbjct: 69  GSGSATLQYWRKGHVEKALVLRLVPLALLGSALGAYLVHFVNPNAFRTLVGVVILGVGVL 128

Query: 141 MLKRDRLYCERKFPDNYVKYIW-----GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +L   R   E  +P   V+ +       ++ G   G LG G G F   L    G ++ ++
Sbjct: 129 VLVNKRFGLEDHYPGLTVRTLALTLPGALIIGMYDGFLGPGTGTFLMFLFALAGFNLVRS 188

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++      A L  +  G  +                L +   + L   L  +++
Sbjct: 189 SGNARTINFATNLGAFLFFLLGGQMV------------WWIGLPMGAANALGATLGARMA 236

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
            + G  ++ + + +I+   +  
Sbjct: 237 MLRGSGFVKVMYGLIVVLVAAR 258


>gi|332707777|ref|ZP_08427804.1| putative permease [Lyngbya majuscula 3L]
 gi|332353480|gb|EGJ32993.1| putative permease [Lyngbya majuscula 3L]
          Length = 268

 Score = 68.9 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 74/215 (34%), Gaps = 25/215 (11%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            ++ +   +  L+G L+G  G+                + +        A  TS   I  
Sbjct: 4   THLLIFAGSGLLAGILAGFLGI--------GGGVVLVPLLVALGYQPVQAAATSSLSIVI 55

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T+    +++ R G  ++K +    F   IT  + + +        L  AF I  L+   L
Sbjct: 56  TASSGTVQNWRMGYFDLKSVIGIGFPALITAQIGAYLADLFPPYLLLVAFGILLLVTIYL 115

Query: 141 MLKRDRLYCERKFPD----------------NYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
           +  R +L    +                      +   G + G L+G  G+GGG     L
Sbjct: 116 IQLRKQLKSRAQQESQRAPNNTPSSNSSTKATVARIATGALAGLLAGLFGIGGGTIMVPL 175

Query: 185 -MLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            ML  G  I  A  TS GV  + A  A +     G
Sbjct: 176 QMLLLGEPIKTAIQTSLGVIVITAVSASVGHALQG 210



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 7/101 (6%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           +GGG +MVP+               +  A+ TSLGVI  T+V + + H   G +      
Sbjct: 166 IGGGTIMVPLQMLLL-------GEPIKTAIQTSLGVIVITAVSASVGHALQGNVLWIEGL 218

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                  +   +++  +  +    ++  F      + I + 
Sbjct: 219 LLGIGGFLGAQISTRFLPKLPDQVVSNGFRTLLFSLSIYIF 259


>gi|148556986|ref|YP_001264568.1| hypothetical protein Swit_4087 [Sphingomonas wittichii RW1]
 gi|148502176|gb|ABQ70430.1| protein of unknown function DUF81 [Sphingomonas wittichii RW1]
          Length = 262

 Score = 68.9 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 96/257 (37%), Gaps = 18/257 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ +   I   F++  + G  G+  G++   +L     +     S  +H+       V  
Sbjct: 14  IEALAPFIAVGFVAQVVDGALGMAFGVITNTLLVSVIGIAPARASASVHL-------VET 66

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S + H     ++ ++    +    +  ++ + +++++D S        + + +G+
Sbjct: 67  FTTAASAVSHIAQRNVDWRLFARLVLPGMLGGILGAYLLANIDGSVARPFVMAYLVGIGV 126

Query: 140 LMLKR-DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
            +L R  R+    +     V    G+V GFL  A G G G      +L  G    +   T
Sbjct: 127 YLLWRAWRMDHGAEHKPAKVIAPLGLVGGFLDAAGGGGWGPVVTSNLLVQGTEPRRTIGT 186

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                  +     L  + +     GL  +++      A + ++   +L  P+   L   I
Sbjct: 187 VNTAEFFLTSTISLTFVAT----LGLQAFTI------AAVGLIIGGLLAAPIGALLVKRI 236

Query: 259 GKKYLTIGFSMIMFTTS 275
             K L     +++  TS
Sbjct: 237 PAKRLLTMVGIVLVATS 253


>gi|114569085|ref|YP_755765.1| hypothetical protein Mmar10_0534 [Maricaulis maris MCS10]
 gi|114339547|gb|ABI64827.1| protein of unknown function DUF81 [Maricaulis maris MCS10]
          Length = 310

 Score = 68.9 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 88/277 (31%), Gaps = 57/277 (20%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           +FGVGGG +M P+L       G+  +    VA+ T    I  +S    + H +  T+++K
Sbjct: 30  MFGVGGGFLMTPLLFFI----GVPPA----VAVSTEANQIVASSASGALAHWKRKTLDIK 81

Query: 99  ILKDWIFVLPITTVVTSLMISHVDK-------------SFLNKAFAIFCLLMGILMLKRD 145
           +    +      ++    + + +               SFL     +  +     +LKR+
Sbjct: 82  MGSLLLVGGSAGSIFGVQLFAFLRSLGQIDLIISLSYVSFLGIVGGLMFVESARSILKRN 141

Query: 146 RLYCERKFPDN------------------------YVKYIWGMVTGFLSGALGVGGGIFT 181
                R    +                            + G   G L+  +GVGGG   
Sbjct: 142 DPASARSRTGHRKRGWIDRLPFKMRFPASGLYISVIPPVLIGFFVGTLAAIMGVGGGFVM 201

Query: 182 NLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
              M++           TS          AL   + +              V++   +++
Sbjct: 202 VPAMIYILRMPTNVVVGTSLFQILF--VTALTTFLQATQNQT---------VDVVLAVLL 250

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           +   ++   L  +    +  + L    +M++    F 
Sbjct: 251 IIGGVIGAQLGARAGRNVKAEELRALLAMMVLAVCFK 287



 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 8/116 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-TSVMS 85
           ++  F  GTL+ + GVGGG VMVP +    +       +  +V +GTSL  I   T++ +
Sbjct: 180 VLIGFFVGTLAAIMGVGGGFVMVPAMIYILR-------MPTNVVVGTSLFQILFVTALTT 232

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           F++  ++ T+++ +    I    I   + +    +V    L    A+  L +   +
Sbjct: 233 FLQATQNQTVDVVLAVLLIIGGVIGAQLGARAGRNVKAEELRALLAMMVLAVCFKL 288


>gi|293606260|ref|ZP_06688623.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292815407|gb|EFF74525.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 275

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 50/290 (17%), Positives = 112/290 (38%), Gaps = 42/290 (14%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           + +D  +  I   + A  L G + G+ G+GGGL+ +P L            +   +A GT
Sbjct: 1   MEQDVSLLVIAACLAAGSLIGFMGGVLGIGGGLIAIPALVLLM-------GMSQQLAQGT 53

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +L ++ P   M+  ++ +   I+ ++         + T V + +   +D S L ++FA+F
Sbjct: 54  ALIMVLPAITMAVRKYNQQTRIDKRVAAAGAAGAVVFTWVGARLALGIDSSVLRRSFAVF 113

Query: 134 CLLMGILML-------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG---- 176
              + +  +             K    +       +  K      T   +  LG+     
Sbjct: 114 LFFIAVFYVWQTWRAGRLAARRKSGDQHPHPASSKHAEKPAAPAFTPRRASVLGMLCGTL 173

Query: 177 -------GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
                  G +    ++         +  T+  ++  +  P   + + + +G  G   W +
Sbjct: 174 GGFFGVGGAVLAVPIIT---TVFRLSQTTAQALALSMVIPGSTIALIT-YGWAGQADWMV 229

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           G       + +   S+L  P+  +L+Y + ++ L   F++++F T  + A
Sbjct: 230 G-------VPLAIGSLLFVPVGVRLAYKLPERKLRASFALMLFATVALLA 272


>gi|90414495|ref|ZP_01222470.1| hypothetical protein P3TCK_00875 [Photobacterium profundum 3TCK]
 gi|90324403|gb|EAS40965.1| hypothetical protein P3TCK_00875 [Photobacterium profundum 3TCK]
          Length = 256

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 98/242 (40%), Gaps = 25/242 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D   + + L+ + + ++G +  + G GGG++ VP L       G+  +     A+ T+  
Sbjct: 2   DLSFEILGLLFLVAGVAGFIDAIAG-GGGMITVPALLAV----GVPPAQ----ALATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  S  + +   R+G +++K +++ I    I + + +L++  +D   L        + 
Sbjct: 53  QGSFGSFSASLYFVRNGFVSLKEMRNAIVFTFIGSAIGALLVQRIDAGVLTSLIPALLVC 112

Query: 137 MGILMLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           + +  L      +     K  +N   +  G   GF  G  G G G    +  +      +
Sbjct: 113 ISLYFLFAPQTGKGGGTPKLSENAFAFTVGTSIGFYDGFFGPGAGSLFTVCFVALAQFGL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++    F ALL  I +G     LP W +G       L++     +   +  
Sbjct: 173 VEATARTKILNFTSNFAALLFFIMAG-----LPIWEIG-------LLMAAGGFIGARMGA 220

Query: 253 KL 254
           K+
Sbjct: 221 KV 222



 Score = 38.9 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 47/121 (38%), Gaps = 13/121 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           + ++   V GF+    G GGG+ T   +L  G    +A AT+    +  +F A L  + +
Sbjct: 10  LLFLVAGVAGFIDAIAG-GGGMITVPALLAVGVPPAQALATNKLQGSFGSFSASLYFVRN 68

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                       GFV++  +   +  + + + +   L   I    LT     ++   S  
Sbjct: 69  ------------GFVSLKEMRNAIVFTFIGSAIGALLVQRIDAGVLTSLIPALLVCISLY 116

Query: 278 F 278
           F
Sbjct: 117 F 117


>gi|238922919|ref|YP_002936432.1| hypothetical protein EUBREC_0507 [Eubacterium rectale ATCC 33656]
 gi|238874591|gb|ACR74298.1| Hypothetical protein EUBREC_0507 [Eubacterium rectale ATCC 33656]
          Length = 258

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 54/267 (20%), Positives = 103/267 (38%), Gaps = 25/267 (9%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
             +  I +   A   +G  +G  G+    V+ P+L      +G+D     ++A+G +L  
Sbjct: 2   STLITIIVTFFAGMGAGLGTGFAGLSAAAVISPMLI---TFLGMDP----YMAVGIALSS 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
               S +S   + ++  +++K     +  +   TVV S + S V  + +         L+
Sbjct: 55  DVLASAVSAYTYGKNKNLDVKNGLIMMVTVLCFTVVGSYVSSLVPSATMGNFSVFMTFLL 114

Query: 138 GILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGA 190
           GI  + R  +  +        K       I G++ GF+ G +G GGG+   L++    G 
Sbjct: 115 GIKFIVRPVMTTKEAMQGVSAKKRAVQSIICGVIIGFICGFIGAGGGMMMLLILTSVLGY 174

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            +  A  TS  + A  AF         G    G P W +       +L+ +  ++L   +
Sbjct: 175 ELKTAVGTSVFIMAFTAFTGAASHFAIG----GKPDWFV-------LLLCIAFTLLWARI 223

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           A   +     K L     +++     V
Sbjct: 224 AAVFANKASAKTLNRATGIVLVILGIV 250



 Score = 38.1 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 12/129 (9%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           +K   V  I   ++  F+ G +    G GGG++M+ +L+             +  A+GTS
Sbjct: 135 AKKRAVQSIICGVIIGFICGFI----GAGGGMMMLLILTSVL-------GYELKTAVGTS 183

Query: 75  LGVIAPTSVMSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           + ++A T+      H    G  +  +L   I    +   + ++  +      LN+A  I 
Sbjct: 184 VFIMAFTAFTGAASHFAIGGKPDWFVLLLCIAFTLLWARIAAVFANKASAKTLNRATGIV 243

Query: 134 CLLMGILML 142
            +++GI++ 
Sbjct: 244 LVILGIVVF 252


>gi|125973730|ref|YP_001037640.1| permease [Clostridium thermocellum ATCC 27405]
 gi|256005532|ref|ZP_05430493.1| protein of unknown function DUF81 [Clostridium thermocellum DSM
           2360]
 gi|281417887|ref|ZP_06248907.1| protein of unknown function DUF81 [Clostridium thermocellum JW20]
 gi|125713955|gb|ABN52447.1| permease [Clostridium thermocellum ATCC 27405]
 gi|255990512|gb|EEU00633.1| protein of unknown function DUF81 [Clostridium thermocellum DSM
           2360]
 gi|281409289|gb|EFB39547.1| protein of unknown function DUF81 [Clostridium thermocellum JW20]
 gi|316940076|gb|ADU74110.1| protein of unknown function DUF81 [Clostridium thermocellum DSM
           1313]
          Length = 123

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 53/117 (45%), Gaps = 7/117 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             V   ++G  +GLFG GGG ++VP +    +          HVA  T++ +I P +++S
Sbjct: 13  FAVIGLVTGIANGLFGSGGGTIVVPAMVLLLKEEE-------HVAHATAISIILPLTLVS 65

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              +  +  I+  +    +    +   + + +++      L K FA+F +   + M+
Sbjct: 66  AFIYVSNSYIDWNLTVKTMLGGIVGGYLGAKLLNVCPSHVLRKIFAVFIIAAAVRMI 122



 Score = 43.5 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 13/120 (10%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            + G+VTG  +G  G GGG      M L      + A AT+  +   +   +  + + + 
Sbjct: 14  AVIGLVTGIANGLFGSGGGTIVVPAMVLLLKEEEHVAHATAISIILPLTLVSAFIYVSNS 73

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                       +++    +  +   I+   L  KL  +     L   F++ +   +   
Sbjct: 74  ------------YIDWNLTVKTMLGGIVGGYLGAKLLNVCPSHVLRKIFAVFIIAAAVRM 121


>gi|27468308|ref|NP_764945.1| hypothetical protein SE1390 [Staphylococcus epidermidis ATCC 12228]
 gi|57867226|ref|YP_188850.1| hypothetical protein SERP1278 [Staphylococcus epidermidis RP62A]
 gi|251811104|ref|ZP_04825577.1| membrane protein [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875864|ref|ZP_06284731.1| putative membrane protein [Staphylococcus epidermidis SK135]
 gi|293366339|ref|ZP_06613019.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|27315854|gb|AAO04989.1|AE016748_223 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|57637884|gb|AAW54672.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
 gi|251805324|gb|EES57981.1| membrane protein [Staphylococcus epidermidis BCM-HMP0060]
 gi|281294889|gb|EFA87416.1| putative membrane protein [Staphylococcus epidermidis SK135]
 gi|291319577|gb|EFE59943.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329737414|gb|EGG73668.1| putative membrane protein [Staphylococcus epidermidis VCU028]
 gi|329737501|gb|EGG73754.1| putative membrane protein [Staphylococcus epidermidis VCU045]
          Length = 254

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 103/256 (40%), Gaps = 26/256 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +I+   F++  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   LSIMLMIVAFGFIASFVDSVVG-GGGLISTPALLAV--------GLPPSVALGTNKFASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +++ S ++  R G +++KI+     ++ + +   +++ +++  + L     I   L+ I
Sbjct: 56  FSTLTSALKFLRSGKVDLKIVGKMFPLIFVASGGGAIIATYIPANILKPLIIIALSLVLI 115

Query: 140 LMLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             + +      R F D       +  +  +V GF  G LG G G F    +L +G     
Sbjct: 116 YTVIQKDWGNIRTFTDFTFTKAVLFTLIFIVIGFYDGFLGGGTGSFMLFTLLLFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A   +  ++      ALL  +             LG VN    +I+    ++   L  + 
Sbjct: 176 AAGNAKVLNFASNCGALLFFMI------------LGQVNYFYGIIMASSMMIGALLGAQF 223

Query: 255 SYMIGKKYLTIGFSMI 270
           +   G  Y+   F ++
Sbjct: 224 ALKKGVGYVKALFLVV 239


>gi|167772382|ref|ZP_02444435.1| hypothetical protein ANACOL_03759 [Anaerotruncus colihominis DSM
           17241]
 gi|167665485|gb|EDS09615.1| hypothetical protein ANACOL_03759 [Anaerotruncus colihominis DSM
           17241]
          Length = 116

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 8/119 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            IV    +G L+GLFG GGG+V+VP+L +        D +    A  TS+ VI P S+ S
Sbjct: 6   FIVTGAAAGLLNGLFGAGGGMVVVPMLQR--------DGLSAQRAHATSIAVILPLSIAS 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            + +   G I++     +I        + +L++  +   +L++ F    L   + +L +
Sbjct: 58  SLLYLTRGYIDLAAAARFIPFGLFGAWLGTLLLPRIKTVWLHRIFGAIVLYSAVRLLLQ 116



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 12/118 (10%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            + G   G L+G  G GGG+    ++   G S  +A ATS  V   ++  + L+ +    
Sbjct: 7   IVTGAAAGLLNGLFGAGGGMVVVPMLQRDGLSAQRAHATSIAVILPLSIASSLLYL---- 62

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                   + G++++ A    +P  +    L T L   I   +L   F  I+  ++  
Sbjct: 63  --------TRGYIDLAAAARFIPFGLFGAWLGTLLLPRIKTVWLHRIFGAIVLYSAVR 112


>gi|318058915|ref|ZP_07977638.1| hypothetical protein SSA3_13281 [Streptomyces sp. SA3_actG]
          Length = 258

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 10/215 (4%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
            + LFG GGG V VPV++     +G D    + VA  TS  V+   ++++ +        
Sbjct: 16  TTALFGFGGGFVTVPVITVVDAGLGGD---AVRVATATSALVMLVNALVATLAAPPRA-- 70

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD---RLYCERK 152
            ++     + +L +   + ++         L   F  +  +  + +L R    R      
Sbjct: 71  -LRGRWALLVLLGVGGALGAVAGRFAPGPVLRWGFVAYVGVTVVDLLARPGFLRPARTVA 129

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                +    G+  G ++  LGVGG + T  L+   GAS+  A A +  ++  I  PAL 
Sbjct: 130 GRRQALPTGLGLPIGAVASFLGVGGSVMTVPLLRRAGASMPVAAALANPLTLAIVAPALC 189

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           V +    G        +G V+I A L +L  S ++
Sbjct: 190 VSLLV-RGSTPAGAGLVGAVDIVAALSLLAGSTVV 223


>gi|315633990|ref|ZP_07889279.1| inner membrane protein YfcA [Aggregatibacter segnis ATCC 33393]
 gi|315477240|gb|EFU67983.1| inner membrane protein YfcA [Aggregatibacter segnis ATCC 33393]
          Length = 255

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 110/264 (41%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + ++ V + ++G +  + G GGGL+ +P L     + GI  +    VA+GT+     
Sbjct: 5   LDILAILFVVALVAGFIDAIAG-GGGLITIPSLL----MTGIPPA----VALGTNKLQAC 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  + +   R   +N   +   + ++   +V  +++I  +D S + K      L +G+
Sbjct: 56  GGSFSASLYFLRKRAVNFSEVWLILLMIFFGSVAGTILIQLIDASVIKKILPFLILAIGV 115

Query: 140 LMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
             L   +L  E   ++       +  G + GF  G  G G G I +   +   G ++ KA
Sbjct: 116 YFLVTPKLGDEDRKQRLSYPVFAFCIGTLMGFYDGFFGPGTGSIMSLACVTLLGFNLAKA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           TA +  ++      +L++ +  G  L     W++G       L ++    +   L  K+ 
Sbjct: 176 TAHAKVMNFTSNLASLILFLIGGQIL-----WTVG-------LAMMAGQFIGANLGAKMV 223

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              GK  +     ++ F  +   A
Sbjct: 224 MTKGKTLIRPMVVVMSFIMTIKMA 247


>gi|228471555|ref|ZP_04056330.1| ABC transporter, permease component [Capnocytophaga gingivalis ATCC
           33624]
 gi|228277131|gb|EEK15811.1| ABC transporter, permease component [Capnocytophaga gingivalis ATCC
           33624]
          Length = 309

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 98/275 (35%), Gaps = 29/275 (10%)

Query: 8   FSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
             L   LS+D  + Y   +I+A   +  ++G  G+G G++     +    +M ID     
Sbjct: 50  LPLREALSRDNYIFY--WMILAGCGAEIVAGSMGMGYGVIC----ATILLMMNIDPRAI- 102

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD----- 122
               G+       TS    + H +   ++ +++K  +    I TVV +L++ ++      
Sbjct: 103 ---SGSIHASETFTSAAGSISHFKLKNMDKELIKRLLVPAIIGTVVGALLLLYLGDEGSR 159

Query: 123 -KSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
              F     A++ +++G+ +L     +  +           G+  GF+    G G G   
Sbjct: 160 WAKFTKPFIAVYTIVLGVKILANG--FRGKVENKEVKTIPLGLFAGFVDAFTGGGWGPLV 217

Query: 182 NLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
               +  G +       S   +  I   + L+ I                +N    L ++
Sbjct: 218 TSSFIKNGHTPRYVIGVSTFTNFAITVVSTLIFITVPEA-----------INWRIALGLV 266

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              +L  P++  ++  +  + +      ++     
Sbjct: 267 IGGVLTAPISALITSKLHTRKIFFIIGSLIIIMGL 301


>gi|148559517|ref|YP_001259216.1| hypothetical protein BOV_1267 [Brucella ovis ATCC 25840]
 gi|225627768|ref|ZP_03785805.1| Protein of unknown function DUF81 [Brucella ceti str. Cudo]
 gi|237815716|ref|ZP_04594713.1| protein of unknown function DUF81 [Brucella abortus str. 2308 A]
 gi|148370774|gb|ABQ60753.1| putative membrane protein [Brucella ovis ATCC 25840]
 gi|225617773|gb|EEH14818.1| Protein of unknown function DUF81 [Brucella ceti str. Cudo]
 gi|237789014|gb|EEP63225.1| protein of unknown function DUF81 [Brucella abortus str. 2308 A]
          Length = 272

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 99/259 (38%), Gaps = 27/259 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+  A+F++G +  + G GGG++ +P L     L GI        A+GT+       S 
Sbjct: 21  LLLTAAAFIAGIIDSIAG-GGGMITIPALL----LAGIPPVE----ALGTNKLQGLFGSS 71

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + R G +N+           + +V+ +L+ + +  + +  A  +  + + I    
Sbjct: 72  SATIAYARKGHVNILQQWPEALASLLGSVLGALLATVLPVNIMRAALPMLLIAIAIYFAL 131

Query: 144 RDRLYCERKFPDNYVKYIWGM----VTGFLSGALGVG-GGIFTNLLMLFYGASIYKATAT 198
           +  L    +       +++G+    + GF  G  G G G  F    + F G  + KATA 
Sbjct: 132 KPSLGDVDRA-RRIGPFLFGVTLVPLIGFYDGLFGPGTGSFFMLAFVAFAGYGVLKATAH 190

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++       L                ++G +N    + +     +   +  +L+  I
Sbjct: 191 TKLLNCASNIGGLATFA------------AVGVINWKIGISMGIAQFIGAQIGARLAMKI 238

Query: 259 GKKYLTIGFSMIMFTTSFV 277
           G + +     ++    +  
Sbjct: 239 GSRIIKPLLIVVSLALAGR 257



 Score = 40.8 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 13/124 (10%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
             +      + G +    G GGG+ T   +L  G    +A  T+       +  A +   
Sbjct: 20  TLLLTAAAFIAGIIDSIAG-GGGMITIPALLLAGIPPVEALGTNKLQGLFGSSSATIAYA 78

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                         G VNI         S+L + L   L+ ++    +     M++   +
Sbjct: 79  RK------------GHVNILQQWPEALASLLGSVLGALLATVLPVNIMRAALPMLLIAIA 126

Query: 276 FVFA 279
             FA
Sbjct: 127 IYFA 130


>gi|227114795|ref|ZP_03828451.1| hypothetical protein PcarbP_17620 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 266

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 13/201 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + ++     L+G +  + G GGGL+ +P L  A         +    A+ T+      
Sbjct: 9   EMLAVLFFVGALAGFIDSIAG-GGGLLTIPALLAA--------GLSPAQALATNKLQAVG 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R   +N+   K  I +  + +   + +I  ++  FL +   +  + +G+ 
Sbjct: 60  GSFSASLYFIRRRAVNLGEQKLAIALTFVGSTFGAWLIQQINADFLRQLLPVLIIGIGLY 119

Query: 141 MLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L   ++  E   R+        + G   GF  G  G G G F  L  +  YG ++ KAT
Sbjct: 120 FLLTPKIGDEDRQRRLSPLPFAIVAGCCVGFYDGFFGPGAGSFYALAFVTLYGFNLAKAT 179

Query: 197 ATSAGVSALIAFPALLVRIYS 217
           A +  ++    F  LL  I S
Sbjct: 180 AHAKILNFTSNFGGLLFFILS 200


>gi|330960935|gb|EGH61195.1| hypothetical protein PMA4326_20572 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 259

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 96/264 (36%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +FL+G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 9   LTTLAILAVVAFLAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     +    +   + +++  ++   +LN+   +     G+
Sbjct: 60  FGSATASFTFYRRKLFHPRQWLHAVVGTAVGAAIGAVIAHYLPAEWLNQMLPVIVFGCGL 119

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G+  GF  G  G G G F T   +L Y   + KA
Sbjct: 120 YLLFGGTPKAPLDSDAPIKKKWQLPQGLGLGFYDGVAGPGTGAFWTVSTLLLYPVDLVKA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V ++SG        + +G       L +    +L        +
Sbjct: 180 SGVARSMNFVSNAVALSVFMFSGQ-----VDYIIG-------LSMGLAVMLGAYFGAGTA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 IKGGAKFIRPVFITVVLGLTVRLA 251


>gi|297184080|gb|ADI20199.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
          Length = 263

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 56/268 (20%), Positives = 99/268 (36%), Gaps = 35/268 (13%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +AS   G   GL G GG ++ VPVL   F        I + ++   SL ++  T+++  +
Sbjct: 7   IASIFIGISLGLIGSGGSILTVPVLVYLF-------GIGVEMSTAYSLFIVGSTALVGGV 59

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVT-SLMISHVDKSFLN-------------KAFAIF 133
            +   G +N K    +     I    T + ++  +    +                FA+ 
Sbjct: 60  RNAFLGNVNYKTAVVFTIPAFIAVYTTRAYLVPAIPSVIMTLGTYVLTKDIAIMVFFALV 119

Query: 134 CLLMGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-G 189
            L   + M++  R   E       +  V  I G V G L+G +G GGG      ++ +  
Sbjct: 120 MLAASVSMIRNKRKKEEENAVPQLNLPVIIIEGAVVGVLTGIVGAGGGFLIIPALVLFAK 179

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             + KA  TS     +IA  +L+  I           W+        +L +  I++    
Sbjct: 180 LPMKKAVGTSL---LIIAAKSLIGFIGDVQRYGDQLDWT-------RLLTVTAIAVFGIF 229

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           +   L+  I  K L  GF   +   +  
Sbjct: 230 IGIYLNTFIDGKKLKKGFGWFVLLMAVY 257



 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 9/125 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +II+   + G L+G+ G GGG +++P L            + M  A+GTSL +IA  S
Sbjct: 145 LPVIIIEGAVVGVLTGIVGAGGGFLIIPALVLF-------AKLPMKKAVGTSLLIIAAKS 197

Query: 83  VMSFMEHRRH--GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           ++ F+   +     ++   L     +      +   + + +D   L K F  F LLM + 
Sbjct: 198 LIGFIGDVQRYGDQLDWTRLLTVTAIAVFGIFIGIYLNTFIDGKKLKKGFGWFVLLMAVY 257

Query: 141 MLKRD 145
           ++ + 
Sbjct: 258 IIGKQ 262


>gi|152978642|ref|YP_001344271.1| hypothetical protein Asuc_0968 [Actinobacillus succinogenes 130Z]
 gi|150840365|gb|ABR74336.1| protein of unknown function DUF81 [Actinobacillus succinogenes
           130Z]
          Length = 254

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 102/242 (42%), Gaps = 25/242 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  ++ I ++   + ++G +  L G GGGL+ +P L     + G+  +    +A+GT+  
Sbjct: 2   EISIELIGILFGVAIVAGFIDALAG-GGGLITIPALL----MTGMPPA----MALGTNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                S  + +   R   ++++ +   +      +V+ S++I  V+ S + K      L 
Sbjct: 53  QACGGSFSASLYFIRKKAVDLRAIWFILLCTFTGSVIGSVLIQLVNSSLIKKVIPFLVLA 112

Query: 137 MGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
           +G   L   +L  +   ++   +       +  GF  G  G G G I + + +   G ++
Sbjct: 113 VGFYFLLTPKLGEKDRRQRLSFHTFALTAALGLGFYDGFFGPGTGSILSLVFVTLLGFNL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            KATA +  ++      +L+  +  G  +     WS+G       + ++   I+   L  
Sbjct: 173 IKATAYTKVLNFTSNLASLICFLIGGQIM-----WSVG-------IAMMCGQIVGAHLGA 220

Query: 253 KL 254
           K+
Sbjct: 221 KM 222


>gi|291523807|emb|CBK89394.1| Predicted permeases [Eubacterium rectale DSM 17629]
 gi|291528725|emb|CBK94311.1| Predicted permeases [Eubacterium rectale M104/1]
          Length = 258

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 54/267 (20%), Positives = 103/267 (38%), Gaps = 25/267 (9%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
             +  I +   A   +G  +G  G+    V+ P+L      +G+D     ++A+G +L  
Sbjct: 2   STLITIIVTFFAGMGAGLGTGFAGLSAAAVISPMLI---TFLGMDP----YMAVGIALSS 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
               S +S   + ++  +++K     +  +   TVV S + S V  + +         L+
Sbjct: 55  DVLASAVSAYTYGKNKNLDVKNGLIMMVTVLCFTVVGSYVSSLVPSATMGNFSVFMTFLL 114

Query: 138 GILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGA 190
           GI  + R  +  +        K       I G++ GF+ G +G GGG+   L++    G 
Sbjct: 115 GIKFIVRPVMTTKEAMQGVSAKKRAVQSIICGVLIGFICGFIGAGGGMMMLLILTSVLGY 174

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            +  A  TS  + A  AF         G    G P W +       +L+ +  ++L   +
Sbjct: 175 ELKTAVGTSVFIMAFTAFTGAASHFAIG----GKPDWFV-------LLLCIAFTLLWARI 223

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           A   +     K L     +++     V
Sbjct: 224 AAVFANKASAKTLNRATGIVLVILGIV 250



 Score = 37.7 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 12/129 (9%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           +K   V  I   ++  F+ G +    G GGG++M+ +L+             +  A+GTS
Sbjct: 135 AKKRAVQSIICGVLIGFICGFI----GAGGGMMMLLILTSVL-------GYELKTAVGTS 183

Query: 75  LGVIAPTSVMSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           + ++A T+      H    G  +  +L   I    +   + ++  +      LN+A  I 
Sbjct: 184 VFIMAFTAFTGAASHFAIGGKPDWFVLLLCIAFTLLWARIAAVFANKASAKTLNRATGIV 243

Query: 134 CLLMGILML 142
            +++GI++ 
Sbjct: 244 LVILGIVVF 252


>gi|91226822|ref|ZP_01261475.1| hypothetical protein V12G01_13634 [Vibrio alginolyticus 12G01]
 gi|269967372|ref|ZP_06181432.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91188953|gb|EAS75237.1| hypothetical protein V12G01_13634 [Vibrio alginolyticus 12G01]
 gi|269827960|gb|EEZ82234.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 259

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 54/263 (20%), Positives = 103/263 (39%), Gaps = 25/263 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  V+ +  + + +  +G +  + G GGGL+ +P L  A         +    A+ T+  
Sbjct: 2   EITVEILLALFLVATAAGFIDAMAG-GGGLITLPALLAA--------GLSPTQALATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  S  +     R+G +++K ++  I    I   + +  +  +D S L     +  + 
Sbjct: 53  QSSFGSFSASWYFVRNGIVSLKEMRFAILCTFIGAAIGAEAVQFIDASVLTSLIPVLLIA 112

Query: 137 MGILMLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
           + +  L      ++  E K  +       G   GF  G  G G G IFT   +     S+
Sbjct: 113 ISLYFLLAPSTRKIDGEPKLSEAMFALCIGGGIGFYDGFFGPGTGSIFTVCFVALGHFSL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++      ALL  I++G     LP W LG       L +     L   L  
Sbjct: 173 VEATARTKILNFTSNIAALLFFIFAG-----LPVWKLG-------LTMAVGGFLGAQLGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTS 275
           K+    G+K++     ++    +
Sbjct: 221 KVVVSKGQKWIRPLVIVMSMLMA 243


>gi|157144731|ref|YP_001452050.1| hypothetical protein CKO_00458 [Citrobacter koseri ATCC BAA-895]
 gi|157081936|gb|ABV11614.1| hypothetical protein CKO_00458 [Citrobacter koseri ATCC BAA-895]
          Length = 269

 Score = 68.6 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 96/237 (40%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  L G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLIVLFFVAMLAGFIDSLAG-GGGLLTIPAL--------MAAGMSPAQALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +N+   K  I +  I ++  +L++ +V  S L +   +  + +G+  
Sbjct: 65  SLSASIYFIRRKVVNLADQKLNILMTFIGSMSGALLVQYVQASILRQILPVLVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        + G   GF  G  G   G F  L  +   G ++ K+TA
Sbjct: 125 LLMPKLGEEDRQRRLYGLPFALVAGGCVGFYDGFFGPAAGSFYALAFVTLCGYNLAKSTA 184

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++A      LL+    G  +     W+ GFV       +L    L   + ++L
Sbjct: 185 HAKVLNATSNIGGLLLFAIGGKVI-----WATGFV-------MLIGQFLGARMGSRL 229


>gi|118474096|ref|YP_891945.1| inner membrane protein YfcA [Campylobacter fetus subsp. fetus
           82-40]
 gi|118413322|gb|ABK81742.1| inner membrane protein YfcA [Campylobacter fetus subsp. fetus
           82-40]
          Length = 257

 Score = 68.6 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 25/260 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  L+   +  SG +  + G GGGL+ +P+L        I   I  H+A+ T+    +  
Sbjct: 7   HYALLFFVACFSGFVDAIAG-GGGLITIPIL--------ISVGIPEHIALATNKLQSSFG 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + +     G IN K +   +    I  V+ ++ +  +D   L+    IF +L+ +  
Sbjct: 58  SFTATLNFSLKGYINYKDIWIGVVFTFIGAVLGTICVLVIDPKILSYLIPIFLILIFLYT 117

Query: 142 LKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
           +   ++  +    K         +G++ GF  G  G G G F    M+   G  + KA A
Sbjct: 118 IFSPKIGEKDRAAKLSPKVFYITFGLMLGFYDGFFGPGAGSFWMFAMVALLGIHMKKAVA 177

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  ++      +L V I  G  L     W LG       +I+    I+     +K+   
Sbjct: 178 HTKALNFTSNIVSLGVFIAGGQIL-----WMLG-------IIMGFGQIIGAYFGSKMVIK 225

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
              K++ I F +++  T   
Sbjct: 226 KEVKFIKIVFLVVVACTILK 245


>gi|256372437|ref|YP_003110261.1| protein of unknown function DUF81 [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009021|gb|ACU54588.1| protein of unknown function DUF81 [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 281

 Score = 68.6 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 76/238 (31%), Gaps = 41/238 (17%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           + +A+G SL  +  TS        R G +N+++         +  +V +L+   V   FL
Sbjct: 47  IRLAVGASLVTVVATSATGASRLVRRGMVNVRLALYLAIATTLGAIVGALLSRAVPTRFL 106

Query: 127 NKAFAIFCLLMGILMLKRDR----------------------------LYCERKFPDNYV 158
              FA   +   + ML+R                              +    +   + +
Sbjct: 107 FLLFAAILVYSAVAMLRRRSGDRIEQPRDDRIADALQLHGAAPIGDGGVLVAHRVERSLL 166

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYS 217
             +     G +S  LG+G G      M +  G  +  A+ATS+ +  + A  +  + +  
Sbjct: 167 GLVLMFGAGVVSALLGIGSGALNVPTMDMLMGVPLKVASATSSFMIGMTAAASAAIYLSR 226

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           G     L               I    +    L  +L   +    +   F  ++   +
Sbjct: 227 GQIDPIL------------AGPIAVGVLGGATLGARLLTRVNVTVVRWVFIAVLVVVA 272



 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 54/125 (43%), Gaps = 7/125 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V+   L +V  F +G +S L G+G G + VP +            + + VA  TS  +I 
Sbjct: 161 VERSLLGLVLMFGAGVVSALLGIGSGALNVPTMDMLM-------GVPLKVASATSSFMIG 213

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   +   G I+  +       +     + + +++ V+ + +   F    +++ +
Sbjct: 214 MTAAASAAIYLSRGQIDPILAGPIAVGVLGGATLGARLLTRVNVTVVRWVFIAVLVVVAV 273

Query: 140 LMLKR 144
            ML++
Sbjct: 274 EMLQK 278


>gi|225874567|ref|YP_002756026.1| hypothetical protein ACP_3017 [Acidobacterium capsulatum ATCC
           51196]
 gi|225791404|gb|ACO31494.1| putative membrane protein [Acidobacterium capsulatum ATCC 51196]
          Length = 277

 Score = 68.6 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 88/258 (34%), Gaps = 44/258 (17%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +V+VPVL+  F        + +H A+G SL  +  TS  +   + R G  N++I      
Sbjct: 30  VVIVPVLTLIFH-------VDIHYAIGASLISVIATSSGAAASYVRDGFSNVRIGMFLEV 82

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD-------------RLYCERK 152
              +  +  + + + V  S +   F +  L       +               +L  +  
Sbjct: 83  ATTLGALFGAYLTTRVPSSAIGVVFGVVLLYSAWSSFRTKHDVHTDAHDPLATKLKLQGS 142

Query: 153 FPDN-----------YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA 200
           FP                +    + G LSG LG+G G    L M          +T TS 
Sbjct: 143 FPGPEGAEAYTAQRVPAGFGLMYLAGTLSGLLGIGSGAVKVLAMDQAMRLPFKVSTTTSN 202

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  + A  +  + +  G+    L         +  +L +L  S+    +  ++      
Sbjct: 203 FMIGVTAAASAGIYLSRGYISPELA--------MPVMLGVLAGSM----IGARMLVHAPV 250

Query: 261 KYLTIGFSMIMFTTSFVF 278
           + L   F+ ++    F  
Sbjct: 251 RTLRTVFAFVIVALGFEM 268



 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 7/115 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           +L+GTLSGL G+G G V V         M     +   V+  TS  +I  T+  S   + 
Sbjct: 165 YLAGTLSGLLGIGSGAVKV-------LAMDQAMRLPFKVSTTTSNFMIGVTAAASAGIYL 217

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
             G I+ ++    +  +   +++ + M+ H     L   FA   + +G  M+   
Sbjct: 218 SRGYISPELAMPVMLGVLAGSMIGARMLVHAPVRTLRTVFAFVIVALGFEMIYNS 272


>gi|47092988|ref|ZP_00230768.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858]
 gi|47018642|gb|EAL09395.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858]
          Length = 249

 Score = 68.6 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 87/260 (33%), Gaps = 48/260 (18%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P L+  F        I +  A+G S+  +  TS  S + + + G  N+++        
Sbjct: 1   MTPALTLIF-------GIDIQYAIGASIISVIATSSGSAIAYIKDGITNLRVGMFLEIAT 53

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR----------------------- 144
            I  +  + +   +  + L   F +  L     M+K+                       
Sbjct: 54  TIGAITGAFVSGLLSATALYIIFGLLLLYSAFNMIKKVGTEFPTNVKPDPLATKLNLHDS 113

Query: 145 -----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATAT 198
                 R   + +  +    +      G  SG LG+G G F  + + +F    +  ++AT
Sbjct: 114 YYDKSLRQTVDYQVANVPAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSAT 173

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  +  + A  +  V ++ G     +               +    ++   L T++   +
Sbjct: 174 SNLMMGVTAAASATVYLFQGDIQPAI------------AAPVAIGVLVGATLGTRIMQRL 221

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
             K + I F  ++   +F  
Sbjct: 222 KSKVIRIIFIPVILYVAFQM 241



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  SGL G+G G   V         + +   + + V+  TS  ++  T+  S   +   
Sbjct: 140 AGIASGLLGIGSGAFKV-------MALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQ 192

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           G I   I       + +   + + ++  +    +   F    L +   M+ 
Sbjct: 193 GDIQPAIAAPVAIGVLVGATLGTRIMQRLKSKVIRIIFIPVILYVAFQMIL 243


>gi|126466107|ref|YP_001041216.1| hypothetical protein Smar_1214 [Staphylothermus marinus F1]
 gi|126014930|gb|ABN70308.1| protein of unknown function DUF81 [Staphylothermus marinus F1]
          Length = 265

 Score = 68.6 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 97/275 (35%), Gaps = 36/275 (13%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  +   I++  +   LS + G+GGG  M+P              + ++ A+GTS  VI 
Sbjct: 5   VLMLIANIISGLVIAILSTMAGIGGGAFMIPYFYFI--------GLPINEAVGTSKFVIV 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+   + + R   + +K     +  +   + + + ++S +D   L    ++F L   I
Sbjct: 57  FISLFGTINYLRLRKVMVKQGIMILIGMIPASYLGAYLVSIIDNRILRLIISVFILFYSI 116

Query: 140 LMLKRDRLYCERKFPDNYVKYIWG-----------MVTGFLSGALGVGGGIF-----TNL 183
            ++         K   +  +   G           ++ G LSG +    G         L
Sbjct: 117 RLIYGFLKKKFGKIKTSTAQQHVGENYIVDKPSVAVLIGLLSGFVAGLTGTGGGVVNMPL 176

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
            +      ++ A A S  V    +  A +         N    + +G       L  +  
Sbjct: 177 FLSVMKIPVHFAVALSTFVIFPSSVAAAIRHAL-----NNDINYFIG-------LPFVLG 224

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +++   +  +++     ++L +   +I+F      
Sbjct: 225 AVIGANIGPRIATKTHSQHLRLFIGLILFYAGIRM 259



 Score = 45.1 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 7/131 (5%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           + ++ +VD   + ++   LSG ++GL G GGG+V +P+     +       I +H A+  
Sbjct: 139 VGENYIVDKPSVAVLIGLLSGFVAGLTGTGGGVVNMPLFLSVMK-------IPVHFAVAL 191

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           S  VI P+SV + + H  +  IN  I   ++    I   +   + +      L     + 
Sbjct: 192 STFVIFPSSVAAAIRHALNNDINYFIGLPFVLGAVIGANIGPRIATKTHSQHLRLFIGLI 251

Query: 134 CLLMGILMLKR 144
               GI ML  
Sbjct: 252 LFYAGIRMLYS 262


>gi|229012853|ref|ZP_04170020.1| hypothetical protein bmyco0001_32920 [Bacillus mycoides DSM 2048]
 gi|228748397|gb|EEL98255.1| hypothetical protein bmyco0001_32920 [Bacillus mycoides DSM 2048]
          Length = 251

 Score = 68.6 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 26/219 (11%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I         I + + S   S +   
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVVSHYREGNVVLVIGGVVGGFGAIGSFIGSKFGSLIPAH 94

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV-----------KYIWGMVTGFLSGAL 173
            L+   A    L  I M  R  ++ +R                      G+VTG L+GA 
Sbjct: 95  LLHWFTAGMLFLSAIFMFIRLIMFQKRSQSSLKGHKELSKDNVIKCIFLGLVTGILAGAF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G   F  L LM+  G +I ++  T+  V   IA                    S G++
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIRQSVGTTMLVILPIAIGGGFGYS------------SEGYL 202

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +   ++ +L  ++L   +  K +    +  L   FSMIM
Sbjct: 203 DYVLLVQVLIGTMLGAYIGAKFTNYAPRMLLR--FSMIM 239



 Score = 37.7 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 42/107 (39%), Gaps = 7/107 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D +   I    ++G L+G FG+G    +   L            + +  ++GT++ VI P
Sbjct: 135 DNVIKCIFLGLVTGILAGAFGIGSAPFIQLGLMVLL-------GLTIRQSVGTTMLVILP 187

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            ++     +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 188 IAIGGGFGYSSEGYLDYVLLVQVLIGTMLGAYIGAKFTNYAPRMLLR 234


>gi|254695129|ref|ZP_05156957.1| hypothetical protein Babob3T_10863 [Brucella abortus bv. 3 str.
           Tulya]
 gi|261215484|ref|ZP_05929765.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|260917091|gb|EEX83952.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
          Length = 289

 Score = 68.6 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/285 (17%), Positives = 95/285 (33%), Gaps = 49/285 (17%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + VA+F +  L G+ G+  G+ +VP+L+  F        I +HVA+  SL  +   S 
Sbjct: 13  LWLFVAAFGASMLGGMLGMASGIFIVPLLTSIF-------GIDIHVAIAASLISVIACSC 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S     +    N+++         +       +I  +  ++L   FAI  +L    ML 
Sbjct: 66  GSAAPLLKERLTNIRLAVVLETATTLGAFTGVFLIGVIPTAYLYLMFAIILVLSAWQMLV 125

Query: 144 RDRLYCE--------------------RKFPDNYVKYIWGMV---------TGFLSGALG 174
           R R   +                     +    +  Y  G +          G +S  LG
Sbjct: 126 RRREMPQTNRLASRTWATLLRLHSAVPDRSSGKFTSYQVGSLPLGLSLMYGAGLVSALLG 185

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G+     M       I  ++ATS  +  +    +                +  G +N
Sbjct: 186 IGSGVLKIQAMDTALRLPIKVSSATSNFMIGVTGAASAGAY------------FMRGDIN 233

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 +   S+L      ++   I    L I F +++   +   
Sbjct: 234 TAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAIAM 278



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 7/122 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + L +   + +G +S L G+G G++ +       Q M     + + V+  TS  +I 
Sbjct: 164 VGSLPLGLSLMYGAGLVSALLGIGSGVLKI-------QAMDTALRLPIKVSSATSNFMIG 216

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T   S   +   G IN  I         +  V  + +++ +    L   F I  +L+ I
Sbjct: 217 VTGAASAGAYFMRGDINTAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAI 276

Query: 140 LM 141
            M
Sbjct: 277 AM 278


>gi|222151631|ref|YP_002560787.1| hypothetical protein MCCL_1384 [Macrococcus caseolyticus JCSC5402]
 gi|222120756|dbj|BAH18091.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 256

 Score = 68.6 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 79/204 (38%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + ++I   FL+  +  + G GGGL+ +P L       G+  S    +A+GT+    +
Sbjct: 3   LNILLILIFFGFLAAFIDSVVG-GGGLISIPALL----ATGMPPS----IALGTNKLASS 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  S +   R   +++ I+     +    +++ + + + +   +L     I   L+ +
Sbjct: 54  FGSFTSTLSFLRSKKVDLNIVGKLFPLSFFGSILGAFIATKMPPEYLKPIAIICLSLVLV 113

Query: 140 LMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             L +        +       + +        G   G LG G G F    +L  G    +
Sbjct: 114 YTLFKKDWGSISTYKKLDKKKSALFIFAITFIGLYDGFLGGGTGSFLLFTLLIIGFDFLR 173

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A   +  ++      ALL+ +  G
Sbjct: 174 AAGNAKFLNFASNLGALLLFMALG 197


>gi|118579626|ref|YP_900876.1| hypothetical protein Ppro_1197 [Pelobacter propionicus DSM 2379]
 gi|118502336|gb|ABK98818.1| protein of unknown function DUF81 [Pelobacter propionicus DSM 2379]
          Length = 277

 Score = 68.6 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/289 (16%), Positives = 98/289 (33%), Gaps = 48/289 (16%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++     I + +  +G +  + G+GGG+++VP L+  F        + M  A+  S   I
Sbjct: 1   MITTTLEIFLIAIAAGVVGSILGLGGGIIIVPALTLLF-------DVPMRSAVAASTVSI 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS  + + +      N+++            +  +L+  ++++  L   F +     G
Sbjct: 54  IATSTGAAVAYLHDRLSNVRVAMWLEMGTAAGALSGALVAGYLNQRLLFIMFGLLLAYSG 113

Query: 139 ILMLKRDR----------------------------LYCERKFPDNYVKYIWGMVTGFLS 170
             M K  +                                 +   +    I    +G  +
Sbjct: 114 FNMFKARKQELPGEVTPDRVSRRLGLGGSYHDHSLDTQVTYQVTRSIPGLILMYFSGAAA 173

Query: 171 GALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G LG+G GIF    M          +TATS  +  + A    +V             ++ 
Sbjct: 174 GTLGIGAGIFKVPAMEQVMRMPFKASTATSNFMIGVTAASGAVVY------------FAR 221

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G VN      ++   +L   +  +L   +  K +   F  ++  T+ + 
Sbjct: 222 GDVNPLIAGPVVLGVLLGALVGARLMVRMNTKTIRKLFIPLIAYTAIMM 270



 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 49/122 (40%), Gaps = 7/122 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++  + SG  +G  G+G G+  VP + +  +       +    +  TS  +I  T+    
Sbjct: 163 LILMYFSGAAAGTLGIGAGIFKVPAMEQVMR-------MPFKASTATSNFMIGVTAASGA 215

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           + +   G +N  I    +  + +  +V + ++  ++   + K F        I+M+ R  
Sbjct: 216 VVYFARGDVNPLIAGPVVLGVLLGALVGARLMVRMNTKTIRKLFIPLIAYTAIMMVYRGI 275

Query: 147 LY 148
             
Sbjct: 276 WK 277


>gi|317495109|ref|ZP_07953479.1| hypothetical protein HMPREF0432_00081 [Gemella moribillum M424]
 gi|316914531|gb|EFV36007.1| hypothetical protein HMPREF0432_00081 [Gemella moribillum M424]
          Length = 281

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 89/261 (34%), Gaps = 52/261 (19%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++ P L+  F        I +  A+G S+  +  TS  S +   +    NM++       
Sbjct: 28  IVTPALTILF-------GIDIKYAIGASIVAVIATSSGSAIAFVKDHVSNMRVGMLLEIF 80

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR---------------DRLYCER 151
                V+ +LM        L   F++  L     MLK+               D+   + 
Sbjct: 81  TTAGGVIGALMAGIFSSKVLYIFFSLILLNAFYGMLKKTGLITKKRVEEKVENDKYAEKY 140

Query: 152 KFPDNYVKYIWG-----------------MVTGFLSGALGVGGGIFTNLLM-LFYGASIY 193
           K   +Y     G                    GF SG LG+G G F  + +  +    I 
Sbjct: 141 KLNSSYYDKATGKTLAYNVTNVPQGSLVMFGAGFASGLLGIGSGAFKVVALDNYMKLPIK 200

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            +TATS  +  + A  + L+  ++G             +N      I   +++ +    K
Sbjct: 201 VSTATSNFMMGVTATASALIYFFNGT------------INPAIAAPIALGTLIGSRTGAK 248

Query: 254 LSYMIGKKYLTIGFSMIMFTT 274
           +   +  KY+   F  I+  T
Sbjct: 249 VMQRLDAKYIRYIFLPILLFT 269



 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G  SGL G+G G   V  L    +L        + V+  TS  ++  T+  S + + 
Sbjct: 170 FGAGFASGLLGIGSGAFKVVALDNYMKL-------PIKVSTATSNFMMGVTATASALIYF 222

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +GTIN  I         I +   + ++  +D  ++   F    L   I M  +
Sbjct: 223 FNGTINPAIAAPIALGTLIGSRTGAKVMQRLDAKYIRYIFLPILLFTIINMFLK 276


>gi|154508978|ref|ZP_02044620.1| hypothetical protein ACTODO_01494 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798612|gb|EDN81032.1| hypothetical protein ACTODO_01494 [Actinomyces odontolyticus ATCC
           17982]
          Length = 266

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 84/270 (31%), Gaps = 31/270 (11%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I   ++     G + G  G GGG++ VP+L               H A G SL ++  T
Sbjct: 1   MIVEALLIGAFVGIVVGSLGAGGGILSVPILVYIL-------GQDPHQATGLSLIIVGLT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + +S     R G +  +    +     + T   S +   +    L  +F      + + M
Sbjct: 54  AAISLATRARSGNVAWREGALFALAGLVGTWAGSALGPLISARALMLSFCALLGAVAVFM 113

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGV-----------------GGGIFTNLL 184
           +            D          T  L+    V                 GG      L
Sbjct: 114 VHSQMRPSASSSSDEAGDTKVDKGTWTLTTVFRVVALATLTGFLTGFFGVGGGFAIVPAL 173

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
            L     + +A+ATS  V  + A   L  R  +G          +       V +    S
Sbjct: 174 HLALRYPMKRASATSLLVMVITAAFGLASRTLAGTLTITAEAGVM-------VALFTAAS 226

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +    +  KL+  +  + L + F+ ++   
Sbjct: 227 MGGGIVGAKLTKRVSNRVLGLVFAALLVCV 256


>gi|299820751|ref|ZP_07052640.1| permease [Listeria grayi DSM 20601]
 gi|299817772|gb|EFI85007.1| permease [Listeria grayi DSM 20601]
          Length = 279

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 89/260 (34%), Gaps = 50/260 (19%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL+  F L        +  A+G S+  +  TS  S + + R   +N+++         I
Sbjct: 30  PVLTLVFGLD-------IKYAIGASIISVIATSSGSTIAYLRDRMLNLRVAMFLEIATTI 82

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK---------- 159
             ++ +++   ++ +F+   F +  +     M+ + R     +      K          
Sbjct: 83  GAILGAVLTGVLNATFMYILFGLLLVYSATNMIIKLRSKKTEQLNKEPDKIAEKLKLDST 142

Query: 160 --------------------YIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATAT 198
                               +      G  SG LG+G G F  + +  F    +  ++AT
Sbjct: 143 YYDKALRKDVDYRVEHVPSGFSVMFGAGLASGLLGIGSGAFKVMALDTFMKMPLKPSSAT 202

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  +  + A  +  V  ++G     +               +    ++   L +++  ++
Sbjct: 203 SNLMMGVTAAASATVYFFNGSIRPEI------------AAPVALGVLIGATLGSRIMQIL 250

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
             K++ + F  I+F      
Sbjct: 251 PAKWIRMIFIPILFYIGIQM 270



 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 50/130 (38%), Gaps = 7/130 (5%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
             D  V+++       F +G  SGL G+G G   V  L    +       + +  +  TS
Sbjct: 151 DVDYRVEHVPSGFSVMFGAGLASGLLGIGSGAFKVMALDTFMK-------MPLKPSSATS 203

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
             ++  T+  S   +  +G+I  +I       + I   + S ++  +   ++   F    
Sbjct: 204 NLMMGVTAAASATVYFFNGSIRPEIAAPVALGVLIGATLGSRIMQILPAKWIRMIFIPIL 263

Query: 135 LLMGILMLKR 144
             +GI M+  
Sbjct: 264 FYIGIQMILN 273


>gi|148556449|ref|YP_001264031.1| hypothetical protein Swit_3547 [Sphingomonas wittichii RW1]
 gi|148501639|gb|ABQ69893.1| protein of unknown function DUF81 [Sphingomonas wittichii RW1]
          Length = 304

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 98/293 (33%), Gaps = 56/293 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +II    L G LSG+FGVGGG +  P++       GI  +    VA+ +S   I   S
Sbjct: 14  MLVIIGLGGLVGVLSGMFGVGGGFLTTPLMIF----YGIPPA----VAVASSAPQITGAS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM------ISHVDKSFLNKAFAIFCLL 136
           V   + H     ++  +    +    I ++    +         +D         +   +
Sbjct: 66  VSGVLAHGSRDGVDYHMGAVLVAGGAIGSLAGGFLFRLLQEAGQIDTVVTVMYVVMLGGI 125

Query: 137 MGI------------------------------LMLKRDRLYCERKFPDNYVKYIWGMVT 166
             +                              ++  R R Y    +      ++ G +T
Sbjct: 126 GAVMARDAIGAILAEWRGESPPGSGRRHHPLIAMLPFRWRFYRSGLYISPLAPFLLGFLT 185

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G ++  +GVGGG      M++  G S      TS      +     +V   +        
Sbjct: 186 GVMTVLMGVGGGFILVPAMIYILGMSARVVVGTSLFQILFVTAATTMVHAMTTRA----- 240

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 V++    ++L  S+    L  +L+  +  +YL +  + I+   +   
Sbjct: 241 ------VDLVLTGLLLIGSVTGAQLGARLALKMKPEYLRLALAFIVLVVAIRM 287



 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 8/124 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +  FL+G ++ L GVGGG ++VP +            +   V +GTSL  I   +  + 
Sbjct: 179 FLLGFLTGVMTVLMGVGGGFILVPAMIYIL-------GMSARVVVGTSLFQILFVTAATT 231

Query: 87  MEH-RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H      +++ +    +        + + +   +   +L  A A   L++ I ML   
Sbjct: 232 MVHAMTTRAVDLVLTGLLLIGSVTGAQLGARLALKMKPEYLRLALAFIVLVVAIRMLLGL 291

Query: 146 RLYC 149
               
Sbjct: 292 TWRP 295


>gi|327404988|ref|YP_004345826.1| hypothetical protein Fluta_3009 [Fluviicola taffensis DSM 16823]
 gi|327320496|gb|AEA44988.1| protein of unknown function DUF81 [Fluviicola taffensis DSM 16823]
          Length = 268

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 7/127 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I++     GT++GL G GGG +++P L    +L        +  A+GTSL +I+  S+M 
Sbjct: 149 ILLQGVFIGTITGLIGAGGGFLIIPALVNLLKL-------PIRTAVGTSLVIISINSLMG 201

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           F+    H ++    L     +  +  ++ S + + +  + L   F  F L+MG+ +L ++
Sbjct: 202 FLFSLSHTSVQWGFLLSIAAIAIVGILIGSYLSTLIKATKLKPIFGWFVLIMGLYILLKE 261

Query: 146 RLYCERK 152
            L+  + 
Sbjct: 262 TLFTLKS 268



 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 87/248 (35%), Gaps = 38/248 (15%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL   F L  I       +A   SL ++  TS +    + + G +++K    +     
Sbjct: 28  VPVLVYLFGLDTI-------LATAYSLFIVGSTSAVGSFSYFKKGLVSIKTAIVFGIPSI 80

Query: 109 ITTVVT-SLMISHVDKSF-------------LNKAFAIFCLLMGILMLKRDRLY----CE 150
               +T   ++  + +               L   FA+  +     M+K+++        
Sbjct: 81  AAIFLTRRYILPAIPQDVFTIGSFTVTKDILLMLLFAVLMVAASYSMIKKNQQTSEEIPS 140

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFP 209
           ++  + +   + G+  G ++G +G GGG      L+      I  A  TS  + ++ +  
Sbjct: 141 QQTFNYFQILLQGVFIGTITGLIGAGGGFLIIPALVNLLKLPIRTAVGTSLVIISINSLM 200

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             L  +                V  G +L I  I+I+   + + LS +I    L   F  
Sbjct: 201 GFLFSLSHTS------------VQWGFLLSIAAIAIVGILIGSYLSTLIKATKLKPIFGW 248

Query: 270 IMFTTSFV 277
            +      
Sbjct: 249 FVLIMGLY 256


>gi|325954102|ref|YP_004237762.1| hypothetical protein Weevi_0465 [Weeksella virosa DSM 16922]
 gi|323436720|gb|ADX67184.1| protein of unknown function DUF81 [Weeksella virosa DSM 16922]
          Length = 268

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 8/132 (6%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           +KD +     +I++   L G L+GL G GGG +++P L            + M +A+GTS
Sbjct: 141 NKDEIQYNYPMILLEGGLVGVLTGLVGAGGGFLIIPALVLL-------ARMPMKLAVGTS 193

Query: 75  LGVIAPTSVMSFMEHRRHGTI-NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           L +IA  S++ F+    +G I + ++L  +  +  +   +   +   +    L  AF  F
Sbjct: 194 LFIIAIKSLLGFLGDINNGEIIDWQLLSIFTVLAVVGIFIGIFLSKKIAGDKLKTAFGYF 253

Query: 134 CLLMGILMLKRD 145
            L+MG+ +L ++
Sbjct: 254 VLVMGVYILVKE 265



 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 95/269 (35%), Gaps = 37/269 (13%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + + L G   GL G GG ++ VP+L     +  +       +A   SL V+  TS++  +
Sbjct: 10  ILAVLVGVSLGLIGSGGSILTVPILVYVMGVNPV-------LATAYSLFVVGTTSLVGGV 62

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVT-SLMISHVDKSFLNK-------------AFAIF 133
           ++     ++ K +  +         +T + +I  +    L                FA+ 
Sbjct: 63  QNAMQKKVDFKTVFIFGIPSIAAVYLTRAYLIPLLPDVLLRIGDFELTKSIGLMILFAVV 122

Query: 134 CLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY- 188
            +L  + M++          +    +  +  + G + G L+G +G GGG      ++   
Sbjct: 123 MILASVSMIRPCPYCQDQNKDEIQYNYPMILLEGGLVGVLTGLVGAGGGFLIIPALVLLA 182

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
              +  A  TS  + A+ +    L  I +G             ++   + I   ++++  
Sbjct: 183 RMPMKLAVGTSLFIIAIKSLLGFLGDINNGE-----------IIDWQLLSIFTVLAVVGI 231

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            +   LS  I    L   F   +      
Sbjct: 232 FIGIFLSKKIAGDKLKTAFGYFVLVMGVY 260


>gi|228942852|ref|ZP_04105369.1| permease [Bacillus thuringiensis serovar berliner ATCC 10792]
 gi|228976756|ref|ZP_04137173.1| permease [Bacillus thuringiensis serovar thuringiensis str. T01001]
 gi|228782969|gb|EEM31131.1| permease [Bacillus thuringiensis serovar thuringiensis str. T01001]
 gi|228816808|gb|EEM62916.1| permease [Bacillus thuringiensis serovar berliner ATCC 10792]
          Length = 282

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 98/282 (34%), Gaps = 48/282 (17%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I+V +  +G +  + G+GGG+++ P L+  F        + ++ A+G S+  +  TS  S
Sbjct: 14  ILVIAIFAGIVGSILGLGGGIIITPALTLLF-------GVDINHAIGASIISVIATSSGS 66

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + + +    NM++         +  +  + +   +   +L   F +  L   I MLK+ 
Sbjct: 67  AIAYLKDKITNMRVGMFLEIATTVGAITGAFIGGIIAPDYLYIIFGLLLLYSAIAMLKKV 126

Query: 146 RL----------------------------YCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
                                                + Y  +      G +SG LG+G 
Sbjct: 127 SQEIPVNVSKHPLATKLKLHGQYYDKALGENISYHVDNVYGGFGVMYGAGVISGLLGIGS 186

Query: 178 GIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G F  + M +F    +  ++ATS  +  + A  +  V    G     +            
Sbjct: 187 GSFKVMAMDVFMKLPLKVSSATSNFMMGVTAAASASVYFLRGDIDPKIS----------- 235

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              +    ++   +  K+   +  K + + F  I+   +   
Sbjct: 236 -APVAIGVLIGATIGAKIMQRLKSKTIRMLFIPILAYVAVQM 276



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G +SGL G+G G       S     M +   + + V+  TS  ++  T+  S   +   
Sbjct: 175 AGVISGLLGIGSG-------SFKVMAMDVFMKLPLKVSSATSNFMMGVTAAASASVYFLR 227

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           G I+ KI       + I   + + ++  +    +   F      + + M+ +
Sbjct: 228 GDIDPKISAPVAIGVLIGATIGAKIMQRLKSKTIRMLFIPILAYVAVQMIIQ 279


>gi|227831114|ref|YP_002832894.1| protein of unknown function DUF81 [Sulfolobus islandicus L.S.2.15]
 gi|227457562|gb|ACP36249.1| protein of unknown function DUF81 [Sulfolobus islandicus L.S.2.15]
          Length = 300

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 98/292 (33%), Gaps = 52/292 (17%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +++  ++++ S LSG L  L G+GG   +VP+ +          ++ +  A G SL    
Sbjct: 19  IEFFVIVVLISALSGILGALTGLGGATFLVPIYTLYL-------NVPIAYASGASLISTI 71

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN----KAFAIFCL 135
            TS  +   + +    N+KI           ++  +L ++++    L       F I  L
Sbjct: 72  ATSSGAASAYIKDRITNVKIGMGLEIATTTGSIAGALTVAYIYAHHLEFIVYIVFGIVLL 131

Query: 136 LMGILMLKRDRLYCERKFPDNYVKY----------------------------IWGMVTG 167
               + L + +    +    ++                               I     G
Sbjct: 132 SQVYVQLAKSKFELPKPIKPDWTTRVFELYGKYYDTVLKREVEYHGVRWWLGEIIMFFAG 191

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           F+SG LG+G G    L M +     +  +T TS  +  + A     +    G+    L  
Sbjct: 192 FISGLLGIGSGALKVLGMDWAMNLPMKVSTTTSNFMIGVTAATGSSIYWIFGYIQPFLAA 251

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +                ++   + TK+   +  K +   F++I+       
Sbjct: 252 GT------------ALGVLIGAFIGTKILVRVTNKTIRYIFTVILIFLGIQM 291



 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +  F +G +SGL G+G G + V  +  A        ++ M V+  TS  +I  T+ 
Sbjct: 181 WLGEIIMFFAGFISGLLGIGSGALKVLGMDWAM-------NLPMKVSTTTSNFMIGVTAA 233

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +   G I   +       + I   + + ++  V    +   F +  + +GI M+ 
Sbjct: 234 TGSSIYWIFGYIQPFLAAGTALGVLIGAFIGTKILVRVTNKTIRYIFTVILIFLGIQMIL 293

Query: 144 R 144
           R
Sbjct: 294 R 294


>gi|313894067|ref|ZP_07827633.1| putative membrane protein [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441631|gb|EFR60057.1| putative membrane protein [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 264

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 99/253 (39%), Gaps = 26/253 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ VA   +G +  + G GGGL+ VP +           ++   +A+G++     
Sbjct: 14  ILILILLAVAGAFAGFVDSIVG-GGGLISVPAMLL--------TNLPPSMALGSNKLSSI 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  + +   R+  ++  +++  +    I +++ +L +  +   ++     +  + + +
Sbjct: 65  FGAGSASITFLRNHMVDFSLVRKLLPFTFIGSMIGTLAVVSLPPLYVKPIIIVLLVCVTL 124

Query: 140 LMLKRDRLYCERKFPDNYVKYI-----WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            ++ +       +      K +     + +  G   G +G G G F  +  +F G     
Sbjct: 125 FVVFKKDWGEVNRTSAVVGKALYICMAFALGIGAYDGFIGPGTGTFLIMGFIFTGFDFLH 184

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A +  ++      +LLV +Y            LG VNI   L      I+   L + L
Sbjct: 185 ASANAKVLNFTSNVASLLVFLY------------LGHVNIKYGLATGAGQIIGAYLGSHL 232

Query: 255 SYMIGKKYLTIGF 267
           +   G   + + F
Sbjct: 233 AIAKGSSLVRVVF 245


>gi|254467781|ref|ZP_05081187.1| hypothetical protein KB13_5 [beta proteobacterium KB13]
 gi|207086591|gb|EDZ63874.1| hypothetical protein KB13_5 [beta proteobacterium KB13]
          Length = 258

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 54/269 (20%), Positives = 105/269 (39%), Gaps = 34/269 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  ++ F+ G L GL GVGGG +M P+L   F+       +   +A+GT L   + T  
Sbjct: 1   MLFTLSGFIIGLLIGLTGVGGGSLMTPLLMLFFK-------VPAAIAVGTDLLYASITKS 53

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIFCLLM 137
           +   +H++ G I   I+KD +       ++TS  +S          SF+     I  ++ 
Sbjct: 54  VGIFKHQKLGHIEWPIVKDLMTGSVPAAILTSFFLSLNLVQEGNMTSFIEVFLGIALIVT 113

Query: 138 GILMLK---------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
            + +           +     E+K     +     +       ++G G    T LL+L+ 
Sbjct: 114 SVAIFFQPLIINKSLKRPSLSEKKRKSITIILGIILGFIVTLTSVGAGAIGVTMLLILYP 173

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
              I K   T    +  +   + +               S+G V++  ++++L  SI   
Sbjct: 174 KLPIKKIIGTDIAHAVPLTLISGIGHA------------SIGTVDLELLIVLLVGSIPGV 221

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            L  KL+     +++ +   +I+F  +  
Sbjct: 222 WLGAKLNAKANDEWIRLLLVIILFGIALK 250



 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 42/103 (40%), Gaps = 6/103 (5%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           VG G + V +L   +        + +   +GT +    P +++S + H   GT+++++L 
Sbjct: 158 VGAGAIGVTMLLILY------PKLPIKKIIGTDIAHAVPLTLISGIGHASIGTVDLELLI 211

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +        + + + +  +  ++     I    + + +L  
Sbjct: 212 VLLVGSIPGVWLGAKLNAKANDEWIRLLLVIILFGIALKLLGN 254


>gi|308048875|ref|YP_003912441.1| hypothetical protein Fbal_1158 [Ferrimonas balearica DSM 9799]
 gi|307631065|gb|ADN75367.1| protein of unknown function DUF81 [Ferrimonas balearica DSM 9799]
          Length = 257

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 98/266 (36%), Gaps = 28/266 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + ++   +F++G +  + G GGGL+ +P L  A         +  H+A+GT+      
Sbjct: 8   NLMAMLAAVAFVAGFVDAIAG-GGGLLTIPALLTA--------GLPPHLALGTNKLAATF 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +     R    + +  +   +   +   + +L +  +   +L +A  +  L + + 
Sbjct: 59  GSATASYTFYRKKLFDPRFWQRAFWGTLLGAAIGTLAVDALSVDWLERALPLLILAIAVH 118

Query: 141 MLKRDRLYCERKFPDNYV------KYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIY 193
            L       E+             ++  G+  GF  G  G G G F T   M+ Y  +I 
Sbjct: 119 SLVSKPPQEEQHQLPEATKSVHRRQWGQGLAIGFYDGFAGPGTGAFWTASSMMLYKMNIL 178

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            ++  +  ++ +    +L   I  G        +S+G       + +    +    +   
Sbjct: 179 LSSGLARSMNFVSNATSLGFFIALG-----HVQFSIG-------IAMGLSLMAGAWIGAH 226

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +   G +++   F  ++   +   A
Sbjct: 227 SAIRFGGRFIRPVFITMVMIIAANLA 252


>gi|296188121|ref|ZP_06856513.1| membrane protein, putative [Clostridium carboxidivorans P7]
 gi|296047247|gb|EFG86689.1| membrane protein, putative [Clostridium carboxidivorans P7]
          Length = 256

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 96/261 (36%), Gaps = 27/261 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + VA F +  +  + G GGG++ VP     F L G+      H+ +GT+       S
Sbjct: 10  LIFLCVAGFFAAFVDSIAG-GGGIISVPA----FLLAGVPP----HITLGTNKFSSTCAS 60

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S ++  + G +++KILK  +    I  V+    +  +D  +LN       L +GI  L
Sbjct: 61  FTSSLKFMQSGKVDLKILKFLLPFTVIGAVLGVNTVLIIDAKYLNMIVLTLLLFVGIYSL 120

Query: 143 KRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
               +  E KF         +  +     GF  G  G G G F    ++  Y     ++ 
Sbjct: 121 FSKSIGKEDKFKGLCKKSLILGILLAFSLGFYDGFFGPGTGSFLIFGLIGIYQFDFVRSA 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
                ++      +L++  + G             +N    + +    I+     TK++ 
Sbjct: 181 GNGKVMNFGSNIASLIMFAFRGQ------------INYKLGVPVAIFMIIGAKFGTKVAL 228

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G K +   F  +    +  
Sbjct: 229 KNGAKIIKPLFVTMSLCVALK 249


>gi|114765506|ref|ZP_01444614.1| membrane protein [Pelagibaca bermudensis HTCC2601]
 gi|114542099|gb|EAU45131.1| membrane protein [Roseovarius sp. HTCC2601]
          Length = 301

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 93/275 (33%), Gaps = 53/275 (19%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           +FGVGGG ++ P+L      MGI  +    VA+ T    I  +SV   + H +  T++++
Sbjct: 30  MFGVGGGFLITPLLFF----MGIPPA----VAVATGANQIVASSVSGVLAHLKRKTVDLR 81

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFCLLMGILML----------- 142
           +    +    +   +   + + + +       +   + +F  ++G LM            
Sbjct: 82  MGTVLLGGGLVGAALGVYVFNLLKQVGQVDLLVRLCYVVFLGIIGSLMFVESLRALRRSK 141

Query: 143 -----------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
                             + R      +       + G+  G LS  +GVGGG      M
Sbjct: 142 KGGPPKRRHHGWVHGLPLKMRFRTSGLYISAIPPVMVGLSVGVLSAIMGVGGGFIMVPAM 201

Query: 186 LF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           ++  G        TS      +     ++   + +            V+I   L++L   
Sbjct: 202 IYLLGMPTKVVVGTSLFQIIFVTAFTTMLHAVTNYT-----------VDILLALVLLIGG 250

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           ++     T     +  + L I  + ++       A
Sbjct: 251 VIGAQFGTAFGTRLKAEQLRILLASLVLLVCGKLA 285



 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G LS + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 176 VMVGLSVGVLSAIMGVGGGFIMVPAMIYLL-------GMPTKVVVGTSLFQIIFVTAFTT 228

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H     T+++ +    +    I     +   + +    L    A   LL+   +    
Sbjct: 229 MLHAVTNYTVDILLALVLLIGGVIGAQFGTAFGTRLKAEQLRILLASLVLLVCGKLALDL 288

Query: 146 RLYCER 151
            L    
Sbjct: 289 FLTPAD 294


>gi|297183261|gb|ADI19399.1| predicted permeases [uncultured Pseudomonadales bacterium
           HF0500_12O04]
          Length = 286

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 62/164 (37%), Gaps = 12/164 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++   +F++G +  + G GGGL+  P L  A    G+      H+ +GT+     
Sbjct: 9   LTTLAILAAVAFVAGFIDAIAG-GGGLLTTPALLTA----GLPP----HLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  + +   R    + +  K  IF      ++ + +  ++   +LNK   +     G+
Sbjct: 60  FGAATASLTFYRRKLFHPREWKLAIFGTLAGALIGATVAHYMPAEWLNKMLPVIVFGCGL 119

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
            +L                   +   G+  GF  G  G G G F
Sbjct: 120 YLLFGGTPKTPIDNDAPIKKKWQLPQGLGLGFYDGVAGPGTGAF 163



 Score = 39.7 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 37/130 (28%), Gaps = 13/130 (10%)

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
                     +      V GF+    G GGG+ T   +L  G   +    T+   S   A
Sbjct: 4   ELSVDLTTLAILAAVAFVAGFIDAIAG-GGGLLTTPALLTAGLPPHLVLGTNKLSSTFGA 62

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
             A L                          + +  ++    +   +++ +  ++L    
Sbjct: 63  ATASLTFYRRKLFHPRE------------WKLAIFGTLAGALIGATVAHYMPAEWLNKML 110

Query: 268 SMIMFTTSFV 277
            +I+F     
Sbjct: 111 PVIVFGCGLY 120


>gi|284998613|ref|YP_003420381.1| protein of unknown function DUF81 [Sulfolobus islandicus L.D.8.5]
 gi|284446509|gb|ADB88011.1| protein of unknown function DUF81 [Sulfolobus islandicus L.D.8.5]
          Length = 300

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 98/292 (33%), Gaps = 52/292 (17%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +++  ++++ S LSG L  L G+GG   +VP+ +          ++ +  A G SL    
Sbjct: 19  IEFFVIVVLISALSGILGALTGLGGATFLVPIYTLYL-------NVPIAYASGASLISTI 71

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN----KAFAIFCL 135
            TS  +   + +    N+KI           ++  +L ++++    L       F I  L
Sbjct: 72  ATSSGAASAYIKDRITNVKIGMGLEIATTTGSIAGALTVAYIYAHHLEFIVYIVFGIVLL 131

Query: 136 LMGILMLKRDRLYCERKFPDNYVKY----------------------------IWGMVTG 167
               + L + +    +    ++                               I     G
Sbjct: 132 SQVYVQLAKSKFELPKPIKPDWTTRVFELYGKYYDTVLKREVEYHGVRWWLGEIIMFFAG 191

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           F+SG LG+G G    L M +     +  +T TS  +  + A     +    G+    L  
Sbjct: 192 FISGLLGIGSGALKVLGMDWAMNLPMKVSTTTSNFMIGVTAATGSSIYWIFGYIQPFLAA 251

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +                ++   + TK+   +  K +   F++I+       
Sbjct: 252 GT------------ALGVLIGAFIGTKILVRVTNKTIRYIFTIILIFLGIQM 291



 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +  F +G +SGL G+G G + V  +  A        ++ M V+  TS  +I  T+ 
Sbjct: 181 WLGEIIMFFAGFISGLLGIGSGALKVLGMDWAM-------NLPMKVSTTTSNFMIGVTAA 233

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +   G I   +       + I   + + ++  V    +   F I  + +GI M+ 
Sbjct: 234 TGSSIYWIFGYIQPFLAAGTALGVLIGAFIGTKILVRVTNKTIRYIFTIILIFLGIQMIL 293

Query: 144 R 144
           R
Sbjct: 294 R 294


>gi|49186465|ref|YP_029717.1| hypothetical protein BAS3462 [Bacillus anthracis str. Sterne]
 gi|49180392|gb|AAT55768.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
          Length = 211

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 12/167 (7%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I +HVA+ TSL  +A T++   + H R G + + I           + + S + S +   
Sbjct: 35  IPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSLIPPY 94

Query: 125 FLNKAFAIFCLLMGILM-LKRDRLYCERKFPDNYVKYI----------WGMVTGFLSGAL 173
            L+   A    L  I M +K  +   E +     +K I           G+VTG ++G+ 
Sbjct: 95  LLHWFTAGMLFLSAIFMCIKLIKFQNEEEVRLVKIKDISKENIMKCICLGLVTGMMTGSF 154

Query: 174 GVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           G+G   F  L LM+  G +I ++  T+  V   IA    L     G+
Sbjct: 155 GIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGY 201


>gi|262379836|ref|ZP_06072992.1| permease [Acinetobacter radioresistens SH164]
 gi|262299293|gb|EEY87206.1| permease [Acinetobacter radioresistens SH164]
          Length = 292

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/278 (18%), Positives = 91/278 (32%), Gaps = 44/278 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  L G   G+ GVGGG +M P+L   F+       I  H+A+ T L   A +    
Sbjct: 7   FILAGVLVGFCVGITGVGGGSLMTPILISLFR-------IEPHIAIDTDLLYAAISKFCG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
            + H R   I   I+          +  T  ++ H           L         L GI
Sbjct: 60  SLVHARKLNIVWPIVLWLALGSIPASFATHWVLEHYLSQSTHYKAVLTTVLGFMLTLTGI 119

Query: 140 LMLKR----------DRLYCERK-------FPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++ R           +     +           +     G+V G       VG G F  
Sbjct: 120 SIIFRAQIEKFFSRFRKPEVSDQEQALFANPRRRFYILFMGIVLGIFVTLSSVGAGAFGI 179

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
           + ++       + +   +    + L+              + GL   S G V+   ++ +
Sbjct: 180 MALILMFPNLPMIRIIGSDVVHAVLLTL------------VAGLGHMSSGNVDFTLLMWL 227

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L  SI    + T +S  + ++ +     + +F     F
Sbjct: 228 LVGSIPAIIVGTLISSRLPERIIRKILGITLFALGINF 265



 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 49/138 (35%), Gaps = 7/138 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            I+    + G    L  VG G   +  L   F       ++ M   +G+ +      +++
Sbjct: 155 YILFMGIVLGIFVTLSSVGAGAFGIMALILMF------PNLPMIRIIGSDVVHAVLLTLV 208

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-MLK 143
           + + H   G ++  +L   +       +V +L+ S + +  + K   I    +GI  ML 
Sbjct: 209 AGLGHMSSGNVDFTLLMWLLVGSIPAIIVGTLISSRLPERIIRKILGITLFALGINFMLH 268

Query: 144 RDRLYCERKFPDNYVKYI 161
             +           +  +
Sbjct: 269 PVKAKPVTTSESAVISTV 286


>gi|262395245|ref|YP_003287099.1| membrane protein [Vibrio sp. Ex25]
 gi|262338839|gb|ACY52634.1| membrane protein [Vibrio sp. Ex25]
          Length = 259

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 54/263 (20%), Positives = 101/263 (38%), Gaps = 25/263 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  V+ +  +   +  +G +  + G GGGL+ +P L  A         +    A+ T+  
Sbjct: 2   EITVEILLALFFVATAAGFIDAMAG-GGGLITLPALLAA--------GLSPTQALATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  S  +     R+G +++K ++  I    I   + +  +  +D S L     +  + 
Sbjct: 53  QSSFGSFSASWYFVRNGIVSLKEMRFAILCTFIGAAIGAEAVQFIDASVLTSLIPVLLIA 112

Query: 137 MGILMLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
           + +  L      ++  E K  +       G   GF  G  G G G IFT   +     S+
Sbjct: 113 ISLYFLLAPSTRKIDGEPKLSEAMFALCIGGGIGFYDGFFGPGTGSIFTVCFVALGHFSL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++      ALL  I +G     LP W LG       L +     L   L  
Sbjct: 173 VEATARTKILNFTSNIAALLFFILAG-----LPVWKLG-------LTMAVGGFLGAQLGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTS 275
           K+    G+K++     ++    +
Sbjct: 221 KVVVSKGQKWIRPLVIVMSMLMA 243


>gi|261868272|ref|YP_003256194.1| inner membrane protein YfcA [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413604|gb|ACX82975.1| inner membrane protein YfcA [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 255

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 106/264 (40%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + ++   +F++G +  + G GGGL+ +P L            +   VA+GT+     
Sbjct: 5   LDILAILFAVAFIAGFIDAIAG-GGGLITIPALLM--------TGLPPAVALGTNKLQAC 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  + +   R   +    +   + ++ + +V  +++I  +D S + K      L +GI
Sbjct: 56  GGSFSASLYFLRQRAVKFSEVWLILLMIFLGSVAGTILIQLIDASLIKKILPFLILAIGI 115

Query: 140 LMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
             L   +L  E   ++       +  G   GF  G  G G G I +   +   G ++ KA
Sbjct: 116 YFLVTPKLGDEDRKQRLSYPIFAFCIGTFMGFYDGFFGPGTGSIMSLACVTLLGFNLAKA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           TA +  ++      +L+  +  G  L     W++G       LI+L    +   L  K+ 
Sbjct: 176 TAHAKVMNFTSNLASLIFFLIGGQIL-----WTVG-------LIMLAGQFIGANLGAKMV 223

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              GK  +     ++ F  +   A
Sbjct: 224 MTKGKTLIRPMVVVMSFIMTVKMA 247


>gi|147678596|ref|YP_001212811.1| permease [Pelotomaculum thermopropionicum SI]
 gi|146274693|dbj|BAF60442.1| predicted permease [Pelotomaculum thermopropionicum SI]
          Length = 299

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 79/250 (31%), Gaps = 46/250 (18%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             +   VA  +    I   S    + H R G ++ K+    +    I     + ++  + 
Sbjct: 42  AGVPPAVATASDTNQIVAASASGTLAHSRSGNVDFKLGFIILVGGLIGGSYGTELVRVLR 101

Query: 123 KS-----FLNKAFAIFCLLMGILMLK--------------RDRLYCERKFPDNY------ 157
                   +  A+ +    +G+ M                +      R            
Sbjct: 102 GMGNFDFVVKIAYVVMLFSVGLFMFFEGLHALRSRNVPREKKDPAVVRYLSRLPLQMDFQ 161

Query: 158 ---------VKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIA 207
                      ++ G + G L+  +GVGGG     +M++  G    KA  TS       +
Sbjct: 162 VSGIRCSVIGLFLLGFLIGILAALMGVGGGFIMLPVMIYLIGIPTIKAVGTSIFTVVFTS 221

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
               + +               G V++   +++L  S +   L  +L  M+  + L + F
Sbjct: 222 INVTIAQSVLN-----------GTVDLVLAILLLIGSSIGAQLGVRLGRMLRGEQLRVIF 270

Query: 268 SMIMFTTSFV 277
           S+I+   +  
Sbjct: 271 SVIVLAVAVK 280



 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 8/123 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + +  FL G L+ L GVGGG +M+PV+            I    A+GTS+  +  TS
Sbjct: 169 VIGLFLLGFLIGILAALMGVGGGFIMLPVMIYLI-------GIPTIKAVGTSIFTVVFTS 221

Query: 83  VMSFMEHR-RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +   +     +GT+++ +    +    I   +   +   +    L   F++  L + + +
Sbjct: 222 INVTIAQSVLNGTVDLVLAILLLIGSSIGAQLGVRLGRMLRGEQLRVIFSVIVLAVAVKI 281

Query: 142 LKR 144
           L  
Sbjct: 282 LYD 284


>gi|16079980|ref|NP_390806.1| transporter [Bacillus subtilis subsp. subtilis str. 168]
 gi|221310872|ref|ZP_03592719.1| hypothetical protein Bsubs1_15986 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315197|ref|ZP_03597002.1| hypothetical protein BsubsN3_15882 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320115|ref|ZP_03601409.1| hypothetical protein BsubsJ_15798 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324397|ref|ZP_03605691.1| hypothetical protein BsubsS_15957 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81637564|sp|O34430|YTNM_BACSU RecName: Full=UPF0721 transmembrane protein ytnM
 gi|2293257|gb|AAC00335.1| YtnM [Bacillus subtilis]
 gi|2635393|emb|CAB14888.1| putative transporter [Bacillus subtilis subsp. subtilis str. 168]
          Length = 300

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 88/263 (33%), Gaps = 26/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +      LS  + G  G+  G+      +      GI  +    VA  +       T+
Sbjct: 4   LIVFAFIGLLSQLIDGSLGMAYGVTS----TSLLLAFGITPA----VASASVHLAEVVTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG---- 138
             S + H + G ++ + +   +    I   + +  +S +         ++F LL+G    
Sbjct: 56  AASGVSHIKFGNVDKQTVYQLVIPGSIGAFLGAAFLSQLPGDVAKPYISLFLLLLGGYVL 115

Query: 139 ILMLKRDRLYCERK--FPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
           I  L + +   E+K    +       G++ GF     G G G  T   L+   G S  K 
Sbjct: 116 IRFLFQYKPALEKKHVPLNRKQSIPLGVIAGFADATGGGGWGPVTTPILLSRKGLSPRKV 175

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             T       IA  A    + S GW            VN   V  ++   I+  P+A  L
Sbjct: 176 VGTVDTSEFAIAVSATAGFLISLGWED----------VNWLWVFSLMAGGIIAAPIAAWL 225

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
                 + + +     +   +  
Sbjct: 226 VQKFHPQLMGVLVGGFIILVNAR 248


>gi|333028919|ref|ZP_08456983.1| putative integral membrane protein [Streptomyces sp. Tu6071]
 gi|332748771|gb|EGJ79212.1| putative integral membrane protein [Streptomyces sp. Tu6071]
          Length = 258

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 97/247 (39%), Gaps = 10/247 (4%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
            + LFG GGG V VPV++     +G D    + VA  TS  V+   ++++ +        
Sbjct: 16  TTALFGFGGGFVTVPVITVVDAGLGGD---AVRVATATSALVMLVNALVATLAAPPRA-- 70

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD---RLYCERK 152
            ++     + +L +   + ++         L   F  +  +  + +L R    R      
Sbjct: 71  -LRGRWALLVLLGVGGALGAVAGRFAPGPVLRWGFVAYVGVTVVDLLARPGFLRPARTVA 129

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                +    G+  G ++  LGVGG + T  L+   GAS+  A A +  ++  I  PAL 
Sbjct: 130 GRRQALPTGVGLPIGAIASFLGVGGSVMTVPLLRRAGASMPVAAALANPLTLAIVAPALC 189

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           V +    G        +G V+I A L +L  S ++  L  +    +        +  ++ 
Sbjct: 190 VSLLV-RGSTPAGAGLVGAVDIVAALSLLAGSTVVVVLLRRRPPRVPDALHAGAYVALLV 248

Query: 273 TTSFVFA 279
               V A
Sbjct: 249 AAGAVVA 255


>gi|90415884|ref|ZP_01223817.1| membrane protein, putative [marine gamma proteobacterium HTCC2207]
 gi|90332258|gb|EAS47455.1| membrane protein, putative [marine gamma proteobacterium HTCC2207]
          Length = 262

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 61/276 (22%), Positives = 104/276 (37%), Gaps = 38/276 (13%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L I +    G   GL GVGGG +M P+L     L G   +    VA+GT L   A T 
Sbjct: 4   LILYIASGAAVGLAIGLTGVGGGSLMTPLLI----LFGFPYN----VAIGTDLLYAAITK 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAIFCLL 136
               + H++  TI  + ++         +V+T+L +S V       +  L ++  +  +L
Sbjct: 56  AGGVVSHQKQKTIQWRTVRMLALGSVPASVITALFLSQVFNDSTEYEGILTRSLGVMLVL 115

Query: 137 MGILMLKRDRLYCERKFP-----------DNYVKYIWGMVTGFLSGALGVGGGIFT--NL 183
              ++L   RL    K             ++ V ++ G+  G       VG G F    L
Sbjct: 116 TATVILLNGRLRQTVKITPESSNGFFARHNDAVIFLVGIFLGIFVTLSSVGAGAFCAAVL 175

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           ++L+      K   T    +  +   A L  +             LG V+   +  +L  
Sbjct: 176 MVLYPHMPALKIVGTDIAHAVPLTLVAGLGHMIW-----------LGNVDFMLLGCLLIG 224

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           S+    L T+L+  I    L    + ++      FA
Sbjct: 225 SLPAIHLGTRLARRIPSNILQTAIATLLLGMGIKFA 260


>gi|288555852|ref|YP_003427787.1| putative permease with tauE sulfite export domain [Bacillus
           pseudofirmus OF4]
 gi|288547012|gb|ADC50895.1| putative permease with tauE sulfite export domain [Bacillus
           pseudofirmus OF4]
          Length = 289

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 85/228 (37%), Gaps = 25/228 (10%)

Query: 52  LSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITT 111
           L+    + G+  +      +GTSL +   TS+   + H R   IN   +  +     I T
Sbjct: 28  LTPLLLMFGLPPTTV----IGTSLMLSLGTSISGAISHFRLKNINWYYVIIFNCTGIIGT 83

Query: 112 VVTSLMISHVDK-----SFLNKAFAIFCLLMGILMLKRDRL---YCERKFPDNYVKYIWG 163
            +   ++  +D      + ++  +          +L   +      ++K P   V  + G
Sbjct: 84  QIAHPLMIRLDSMGFAETVISVFYIALLSYFAFSLLFPAKKEIQSTKKKLPPAIVAGLIG 143

Query: 164 MVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           +  GF+S ALGV GG F   L++   G    +A  TS      I    L+    S     
Sbjct: 144 LGAGFISSALGVSGGFFIVPLLISLLGFKASQAVGTSLASVVFIVAAGLISYSLSSP--- 200

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
                    +N G  L ++  + L  P+  + + +  +K +     ++
Sbjct: 201 ---------INFGIGLALILGTFLGAPIGARSTRLFNEKKMKNLLGIL 239



 Score = 43.9 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 39/117 (33%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +    +G +S   GV GG  +VP+L                 A+GTSL  +        +
Sbjct: 141 LIGLGAGFISSALGVSGGFFIVPLLISLLGF-------KASQAVGTSLASVVFIVAAGLI 193

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +     IN  I    I    +   + +      ++  +     I  + M + +L  
Sbjct: 194 SYSLSSPINFGIGLALILGTFLGAPIGARSTRLFNEKKMKNLLGILYVCMIVSVLSN 250


>gi|260913641|ref|ZP_05920117.1| inner membrane protein YfcA [Pasteurella dagmatis ATCC 43325]
 gi|260632180|gb|EEX50355.1| inner membrane protein YfcA [Pasteurella dagmatis ATCC 43325]
          Length = 253

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 55/264 (20%), Positives = 109/264 (41%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D I ++   +F++G +  + G GGGL+ +P L     + G+  +    +A+GT+     
Sbjct: 5   LDIIAILFCVAFIAGFIDAIAG-GGGLITIPALL----MTGMPPA----LALGTNKLQAC 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  + +   R   +N+  +   + +  +     +++I  VD   + KA     L +G+
Sbjct: 56  GGSFSASLYFLRQRAVNLSEVWLILLMTFLGASCGTILIQLVDSGLIKKALPFLILAIGL 115

Query: 140 LMLKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
             L   +L  E +          +  GM  GF  G  G G G   +L  ++  G ++ KA
Sbjct: 116 YFLLSPKLGEEDRQKRISYTVFAFTAGMGIGFYDGFFGPGTGSMLSLAFVMLLGFNLTKA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           TA +  ++      +L+  +  G  +     WS+G       L ++   I+   L  K+ 
Sbjct: 176 TAHAKVLNFTSNIASLIFFLIGGQIM-----WSVG-------LAMMFGQIIGANLGAKMV 223

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              GK  +     ++ F  +   A
Sbjct: 224 LTKGKTLIRPMVVIMSFIMTIKMA 247


>gi|229015688|ref|ZP_04172671.1| integral membrane protein [Bacillus cereus AH1273]
 gi|229021880|ref|ZP_04178450.1| integral membrane protein [Bacillus cereus AH1272]
 gi|228739426|gb|EEL89852.1| integral membrane protein [Bacillus cereus AH1272]
 gi|228745605|gb|EEL95624.1| integral membrane protein [Bacillus cereus AH1273]
          Length = 287

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 80/208 (38%), Gaps = 14/208 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           + ++     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T
Sbjct: 31  IMEELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLSPASAIAT 81

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       ++ S +   R G ++ +I+   I +  I  V  +L++  +    L     + 
Sbjct: 82  NKLAATMGTLTSTIYFIRSGKVDFRIVGKLIPLTIIGAVAGALVVKFIPPDILRPLVLVM 141

Query: 134 CLLMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
            + + I ++ +        +         + +   ++ GF  G  G G G F     L  
Sbjct: 142 LVFIAIYIIAKKDWGSASTYKKMTKGKTLMFFFVILMIGFYDGFFGPGTGSFLIFAFLLI 201

Query: 189 GASIYKATATSAGVSALIAFPALLVRIY 216
           G    +A A+   ++ +    +L+  ++
Sbjct: 202 GLDFIQAAASGKLLNFVSNIVSLITFLF 229


>gi|172058870|ref|YP_001815330.1| hypothetical protein Exig_2867 [Exiguobacterium sibiricum 255-15]
 gi|171991391|gb|ACB62313.1| protein of unknown function DUF81 [Exiguobacterium sibiricum
           255-15]
          Length = 284

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 76/220 (34%), Gaps = 19/220 (8%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
                VA+ TSL +   ++V   + H R   +  +       V  I + + + ++  +++
Sbjct: 36  GFAPSVAIATSLMLTLGSTVSGTLSHLRLKNVVWRDSLVVGLVGIIGSTIATPIVLRLEE 95

Query: 124 S-----FLNKAFAIFCLLMGILMLKRDRLYCERK--FPDNYVKYIWGMVTGFLSGALGVG 176
                  ++  +    L      L+       +             G+  GF+S  LGV 
Sbjct: 96  VNGAHLVISIVYIGLLLYFANKFLRPKTTTGSQTGWKNRYLALGFIGLFAGFISSLLGVS 155

Query: 177 GGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           GG     L++   G  + +A  TS   + LI    L+    +              V++ 
Sbjct: 156 GGFIITPLLVGIAGYELKRAVGTSIASALLIVLSGLVNYTVASTD-----------VDLL 204

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             ++++  ++L  P+  K        ++     +   T +
Sbjct: 205 VGVMLIIGALLGAPIGAKQLAHFDSPFVKKYLGIFYLTVA 244



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 8/124 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +    +      +G +S L GV GG ++ P+L              +  A+GTS+     
Sbjct: 133 NRYLALGFIGLFAGFISSLLGVSGGFIITPLLVGI-------AGYELKRAVGTSIASALL 185

Query: 81  TSVMSFMEH-RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +   + +      +++ +    I    +   + +  ++H D  F+ K   IF L +  
Sbjct: 186 IVLSGLVNYTVASTDVDLLVGVMLIIGALLGAPIGAKQLAHFDSPFVKKYLGIFYLTVAT 245

Query: 140 LMLK 143
            +L 
Sbjct: 246 SVLL 249


>gi|315283501|ref|ZP_07871677.1| permease [Listeria marthii FSL S4-120]
 gi|313612855|gb|EFR86821.1| permease [Listeria marthii FSL S4-120]
          Length = 279

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 86/258 (33%), Gaps = 48/258 (18%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+  F        I +  A+G S+  +  TS  S + + + G  N+++         I
Sbjct: 33  PALTLIF-------GIDIQYAIGASIISVIATSSGSAIAYIKDGITNLRVGMFLEIATTI 85

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR------------------------- 144
             +  + +   +  + L   F +  L     M+K+                         
Sbjct: 86  GAITGAFVSGLLSATALYIIFGLLLLYSAFNMIKKVGTEFPTNVKPDPLATKLNLHDSYY 145

Query: 145 ---DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA 200
               R   + +  +    +      G  SG LG+G G F  + + +F    +  ++ATS 
Sbjct: 146 DKSLRQNVDYQVANVPAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSATSN 205

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  + A  +  V ++ G     +               +    ++   L T++   +  
Sbjct: 206 LMMGVTAAASATVYLFQGDIQPAI------------AAPVAIGVLVGATLGTRIMQRLKS 253

Query: 261 KYLTIGFSMIMFTTSFVF 278
           K + I F  ++   +F  
Sbjct: 254 KVIRIIFIPVILYVAFQM 271



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  SGL G+G G   V         + +   + + V+  TS  ++  T+  S   +   
Sbjct: 170 AGIASGLLGIGSGAFKV-------MALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQ 222

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           G I   I       + +   + + ++  +    +   F    L +   M+ 
Sbjct: 223 GDIQPAIAAPVAIGVLVGATLGTRIMQRLKSKVIRIIFIPVILYVAFQMIL 273


>gi|145632165|ref|ZP_01787900.1| 50S ribosomal protein L17 [Haemophilus influenzae 3655]
 gi|145634782|ref|ZP_01790490.1| predicted permease [Haemophilus influenzae PittAA]
 gi|229844674|ref|ZP_04464813.1| 50S ribosomal protein L17 [Haemophilus influenzae 6P18H1]
 gi|144987072|gb|EDJ93602.1| 50S ribosomal protein L17 [Haemophilus influenzae 3655]
 gi|145267948|gb|EDK07944.1| predicted permease [Haemophilus influenzae PittAA]
 gi|229812388|gb|EEP48078.1| 50S ribosomal protein L17 [Haemophilus influenzae 6P18H1]
          Length = 269

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 97/264 (36%), Gaps = 12/264 (4%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I ++++    +  +S +FG+GGG++MVP+L   F        + + V   TSL ++  
Sbjct: 4   STIFILLICGICTNMVSAIFGIGGGVLMVPILRTLF------PELPIQVISATSLTIVMC 57

Query: 81  TSVMSF-MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           T++++    H++   I+   +  W   + I   +   +  +   + ++  F +    + I
Sbjct: 58  TALINLLFFHKQKIKIDYINMILWSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAI 117

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVT-----GFLSGALGVGGGIFTNLLMLFYGASIYK 194
                           + ++   G ++              GG I   L+    G    +
Sbjct: 118 KTFLNRSRTQIEVSNMSPIERAKGSISFCGGGLIAGITGIGGGSILAPLVGQLKGVKTQQ 177

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
               +  +  +     L   +   +  +      LG+VN   V ++   S  ++  + KL
Sbjct: 178 IAVYTNYMMIIGGIGNLYGYLTRAFPYDISLSGQLGYVNFFVVGVVTLGSFGMSFFSMKL 237

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
             ++         ++I+F  +   
Sbjct: 238 RGLMNPALTRKLLAIILFCIAAYM 261


>gi|146301061|ref|YP_001195652.1| hypothetical protein Fjoh_3317 [Flavobacterium johnsoniae UW101]
 gi|146155479|gb|ABQ06333.1| protein of unknown function DUF81 [Flavobacterium johnsoniae UW101]
          Length = 278

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 38/241 (15%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + +H A+G +L  +  TS  S   + + G  NM++         I  V  +L+ +    
Sbjct: 41  GVDIHYAIGAALVSVIATSSGSAAAYVKEGITNMRLGIFLEIATTIGAVCGALLSTIAPT 100

Query: 124 SFLNKAFAIFCLLMGILMLKRDR--------------------LYCERKFPDNYVKYIWG 163
           SF+   F +  +   I  L++                         E +      K + G
Sbjct: 101 SFIAVLFGLTLIFSAINSLRKKEEHIVLESSPLAKKLKLNGTYPTHEGEVVSYGTKNVIG 160

Query: 164 -----MVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYS 217
                 + G +SG LG+G G F  + M          +T TS  +  + A  + ++ I  
Sbjct: 161 GFSMMGIAGMMSGLLGIGSGAFKVIAMDNIMRIPFKVSTTTSNFMMGVTAMASSVIYIQK 220

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G+   G        + +  V+ +    +       K+      K L I F+ ++F  +  
Sbjct: 221 GYIEPG--------ICMPVVIGV----LFGAMAGAKVLVKTNPKKLRIFFACLIFVLAVN 268

Query: 278 F 278
            
Sbjct: 269 M 269



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 46/113 (40%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G +SGL G+G G   V  +    +       I   V+  TS  ++  T++ S + + +
Sbjct: 167 IAGMMSGLLGIGSGAFKVIAMDNIMR-------IPFKVSTTTSNFMMGVTAMASSVIYIQ 219

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G I   I    +  +    +  + ++   +   L   FA    ++ + M+  
Sbjct: 220 KGYIEPGICMPVVIGVLFGAMAGAKVLVKTNPKKLRIFFACLIFVLAVNMIYN 272


>gi|256847182|ref|ZP_05552628.1| permease [Lactobacillus coleohominis 101-4-CHN]
 gi|256715846|gb|EEU30821.1| permease [Lactobacillus coleohominis 101-4-CHN]
          Length = 282

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 80/247 (32%), Gaps = 44/247 (17%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + M  A+G S+  +  TS  + + + +   +N+++         I  +  +++   +D 
Sbjct: 39  GLPMRYAIGASVIAVIATSSGATIAYLKDDLLNLRVAMFLEIATTIGAITGAILTGVIDG 98

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCER-------------------------------K 152
            +L   F IF +     ++++ R                                    +
Sbjct: 99  KWLEVIFGIFLVYSTYNLIQKLRGKVRVDATNVSDDKWARKLKLQGSYYDQLSMQEKYYQ 158

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPAL 211
                  +      G  SG LG+G G+F  + M       +  ++ATS  +  + A  + 
Sbjct: 159 VTRVPGGFAMMYAAGLASGLLGIGSGVFKVIAMDTIMKMPLKPSSATSNLMMGVTAAASA 218

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            V  ++G     +               +    ++   + T+L   I  + L + F  I+
Sbjct: 219 TVYFFNGSIHPHI------------AAPLAIGILIGAAIGTRLMQRIQPRLLRMIFVPIL 266

Query: 272 FTTSFVF 278
                  
Sbjct: 267 LIMGIQM 273



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  SGL G+G G+  V  +    +       + +  +  TS  ++  T+  S   +  +
Sbjct: 172 AGLASGLLGIGSGVFKVIAMDTIMK-------MPLKPSSATSNLMMGVTAAASATVYFFN 224

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           G+I+  I       + I   + + ++  +    L   F    L+MGI M+ +
Sbjct: 225 GSIHPHIAAPLAIGILIGAAIGTRLMQRIQPRLLRMIFVPILLIMGIQMILK 276


>gi|321312464|ref|YP_004204751.1| putative transporter [Bacillus subtilis BSn5]
 gi|320018738|gb|ADV93724.1| putative transporter [Bacillus subtilis BSn5]
          Length = 300

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 88/263 (33%), Gaps = 26/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +      LS  + G  G+  G+      +      GI  +    VA  +       T+
Sbjct: 4   LIVFAFIGLLSQLIDGSLGMAYGVTS----TSLLLAFGITPA----VASASVHLAEVVTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG---- 138
             S + H + G ++ + +   +    I   + +  +S +         ++F LL+G    
Sbjct: 56  AASGVSHIKFGNVDKQTVYQLVIPGSIGAFLGAAFLSQLPGDVAKPYISLFLLLLGGYVL 115

Query: 139 ILMLKRDRLYCERK--FPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
           I  L + +   E+K    +       G++ GF     G G G  T   L+   G S  K 
Sbjct: 116 IRFLFQYKPALEKKHVPLNRKQSIPLGVIAGFADATGGGGWGPVTTPILLSRKGLSPRKV 175

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             T       IA  A    + S GW            VN   V  ++   I+  P+A  L
Sbjct: 176 VGTVDTSEFAIAVSATAGFLISLGWED----------VNWLWVFSLMAGGIIAAPIAAWL 225

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
                 + + +     +   +  
Sbjct: 226 VQKFHPQLMGVLVGGFIILVNAR 248


>gi|282916974|ref|ZP_06324732.1| hypothetical protein SATG_00467 [Staphylococcus aureus subsp.
           aureus D139]
 gi|282319461|gb|EFB49813.1| hypothetical protein SATG_00467 [Staphylococcus aureus subsp.
           aureus D139]
          Length = 249

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 75/193 (38%), Gaps = 14/193 (7%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  +  I  IIV  F++  +  + G GGGL+  P L       G+  S    VA+GT+  
Sbjct: 2   DISLTMIITIIVFGFIAAFIDAVVG-GGGLISTPALLAI----GLPPS----VALGTNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  S+ S ++  R G +++ ++      + + +   + + + V    L     I    
Sbjct: 53  ASSFGSLTSTIKFIRSGKVDLYVVAKLFGFVFLASACGAYIATMVPSQILKPLIIIALSS 112

Query: 137 MGILMLKRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
           + I  L +      R      F    +     ++ GF  G +G   G F   ++L +G  
Sbjct: 113 VFIFTLLKKDWGNTRTFTQFTFKKALLFAALFILIGFYDGFVGGETGSFMLFVLLIFGFD 172

Query: 192 IYKATATSAGVSA 204
              A   +  ++ 
Sbjct: 173 FLSAAGNAKVLNF 185


>gi|326335836|ref|ZP_08202015.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325691980|gb|EGD33940.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 310

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 95/261 (36%), Gaps = 29/261 (11%)

Query: 8   FSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
            SL   L+++  + Y   +I+A   +  ++G  G+G G++     +    +M +D     
Sbjct: 51  ISLKNTLAQENYLFY--WMILAGCGAEIIAGSMGMGYGVIC----ATILLIMNVDPRAI- 103

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD----- 122
               G+       T+    + H +   ++ +++K  +    I TV+ +L++ ++      
Sbjct: 104 ---SGSIHASETVTAAAGSISHFKLKNMDKELIKRLLIPAIIGTVIGALLLLYLGNEGNG 160

Query: 123 -KSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
                    A++ +++G  +L+    +  +           G+  GF+    G G G   
Sbjct: 161 LAKLTKPFIAMYTIVLGFKILRNG--FRGKVENKEVKTIPLGLFAGFVDAFTGGGWGPLV 218

Query: 182 NLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
               +  G +       S   +  I   + ++ I                +N    L ++
Sbjct: 219 TSSFIKNGHTPRYVIGVSTFTNFAITVVSTIIFITVPEA-----------INWRIALGLI 267

Query: 242 PISILITPLATKLSYMIGKKY 262
              ++  P++  ++  +  + 
Sbjct: 268 IGGVVTAPISALVTSKLPPRK 288


>gi|283778256|ref|YP_003369011.1| hypothetical protein Psta_0463 [Pirellula staleyi DSM 6068]
 gi|283436709|gb|ADB15151.1| protein of unknown function DUF81 [Pirellula staleyi DSM 6068]
          Length = 275

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 81/227 (35%), Gaps = 35/227 (15%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I    L G   GL G GG +  VP+L      +G D      +    SL  +  TS+
Sbjct: 4   ALTIALGALVGVSLGLTGGGGAIFAVPLLVY---GLGFDSRQAATM----SLVTVGITSL 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +  ++      +  K+   +     + + +  ++ + + ++     FA   L++   M +
Sbjct: 57  IGLLQKAAQRQLEFKVGLLFAIAGALGSPIGVMLAAQLHETLRLALFAGLMLVIAFQMWR 116

Query: 144 RDRLY---------------------------CERKFPDNYVKYIWGMVTGFLSGALGVG 176
           R                                    P   +    G+  G LSG  GVG
Sbjct: 117 RASTVQLELPLAWHRTPTEQRAVTCQRDPEGILRITSPCALLLGAVGIGAGILSGMFGVG 176

Query: 177 GGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           GG      ++ + G ++ +A  TS  V  +++   LL++   G  + 
Sbjct: 177 GGFIIVPALVLFSGMAMRRAVGTSLLVITIVSLTTLLLQTLDGVEIP 223



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 8/122 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+      +G LSG+FGVGGG ++VP L            + M  A+GTSL VI   S+
Sbjct: 157 LLLGAVGIGAGILSGMFGVGGGFIIVPALVLF-------SGMAMRRAVGTSLLVITIVSL 209

Query: 84  MSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            + +     G  I +     +        ++ S +   +    L K FA   LL+ I ++
Sbjct: 210 TTLLLQTLDGVEIPLITTSLFSAGSIAGLLLGSGLSHLLAGPRLQKVFATMILLVVIFII 269

Query: 143 KR 144
            +
Sbjct: 270 TK 271


>gi|15865656|gb|AAL09994.1|AF374354_2 unknown [Magnetospirillum gryphiswaldense MSR-1]
 gi|33945233|emb|CAE12038.1| mamO [Magnetospirillum gryphiswaldense]
 gi|78033504|emb|CAJ30122.1| magnetosome protein MamO [Magnetospirillum gryphiswaldense MSR-1]
 gi|144901165|emb|CAM78029.1| magnetosome protein MamO, putative serine protease
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 632

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 72/235 (30%), Gaps = 48/235 (20%)

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + +   +    +K  I       V+   + + +  S +     +F L+M    + 
Sbjct: 402 AAALRNDKAQLVQWDKVKPLIPWGVAGVVIGYFIGNAIGDSVVGVLLGLFALIMAGKAVL 461

Query: 144 -----------------------------------RDRLYCERKFPDNYVKYIWGMVTGF 168
                                              R +              + G+  G 
Sbjct: 462 EILQPNAGEDTAEAIAAAEAGDEMDELMALAEGTTRPKTSGIALPEGPTRSAVLGLPMGL 521

Query: 169 LSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            SG LG+ GG+    L  + G  S+  A A S+ +    +    +V    G         
Sbjct: 522 FSGILGISGGVIEVPLQRYIGRISLQNAIANSSVLVFWASVAGSVVAFIHG--------G 573

Query: 228 SLGFVNIGA----VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           S G ++  A     L+++P + +   L  +L  ++  + L   ++  M   +   
Sbjct: 574 STGLIHWEAPVTLALVMIPGAYVGGILGARLMRVLPVRVLKGIYAATMAAIAIKM 628



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 15/124 (12%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V     G  SG+ G+ GG++ VP+             I +  A+  S  ++   SV   
Sbjct: 513 AVLGLPMGLFSGILGISGGVIEVPLQRYI-------GRISLQNAIANSSVLVFWASVAGS 565

Query: 87  MEHRRHGT----INMK----ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           +    HG     I+ +    +    I    +  ++ + ++  +    L   +A     + 
Sbjct: 566 VVAFIHGGSTGLIHWEAPVTLALVMIPGAYVGGILGARLMRVLPVRVLKGIYAATMAAIA 625

Query: 139 ILML 142
           I ML
Sbjct: 626 IKML 629


>gi|254705697|ref|ZP_05167525.1| hypothetical protein BpinM_01480 [Brucella pinnipedialis
           M163/99/10]
          Length = 316

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 88/273 (32%), Gaps = 56/273 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G LSGLFGVGG  ++ P+L           +I   +A+ T    +  +S
Sbjct: 24  MLVLLGMGAAVGFLSGLFGVGGSFLITPLLIFY--------NIPPAIAVATGANQVIASS 75

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
           V   + H +  T+++K+    +    + +++   + S +         ++  +  F   +
Sbjct: 76  VSGALAHFKRRTLDIKLGLFLVAGGILGSLIGIFVFSWLRDLGQLDLIVSILYVFFLGTI 135

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R      +         G   
Sbjct: 136 GGLMLVESVQALRRAKKGQGGAVRRSGQHTWIHRLPFKMRFRASTIYVSVIPVLGIGFFI 195

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G LS  +GVGGG      +++           TS      +     +++  +        
Sbjct: 196 GLLSSVMGVGGGFIMVPALIYLLHVPTNVVVGTSLFQITFVTAFTTVMQATTNQS----- 250

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 ++I    +++   ++      +    +
Sbjct: 251 ------IDIVLAFLLMVGGVIGAQYGARAGRKL 277



 Score = 42.4 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 8/103 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-T 81
           +  ++   F  G LS + GVGGG +MVP L            +  +V +GTSL  I   T
Sbjct: 185 VIPVLGIGFFIGLLSSVMGVGGGFIMVPALIYLLH-------VPTNVVVGTSLFQITFVT 237

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +  + M+   + +I++ +    +    I     +     +   
Sbjct: 238 AFTTVMQATTNQSIDIVLAFLLMVGGVIGAQYGARAGRKLRGE 280


>gi|325109046|ref|YP_004270114.1| hypothetical protein Plabr_2491 [Planctomyces brasiliensis DSM
           5305]
 gi|324969314|gb|ADY60092.1| protein of unknown function DUF81 [Planctomyces brasiliensis DSM
           5305]
          Length = 297

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 77/264 (29%), Gaps = 31/264 (11%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
            + + G   G+ G GG  + VPVL                 ++  S+ ++   S+ + + 
Sbjct: 7   GALIIGITLGMLGSGGSAITVPVLVYLV-------GHGAKESIAESMAIVGLISIAAAIP 59

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
           + R   I+ + +  +       T + + +      S     F     L    M    R  
Sbjct: 60  YARARQIDWRSVWLFGIPGMAGTFLGAWLGGIAPDSLQLSVFGGVLFLAAFSMFDWKRNR 119

Query: 149 -----------------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
                               + P   V     +V          GG +    L+L    S
Sbjct: 120 QAAGVSEETEDSPATDEPIHRSPMWKVATEGSVVGVLTGFVGVGGGFLIVPALVLLGKLS 179

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           +  A  TS  + A  +        +    +       +       VL+   I      L 
Sbjct: 180 MRLAVGTSLLIIAAKSLVGFAKYEHHLLQMGSSADMQV-------VLLFFVIGAAGALLG 232

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTS 275
            K++  + ++ L   F++ +    
Sbjct: 233 RKINARLDQRVLKNVFAVFLILLG 256


>gi|227547830|ref|ZP_03977879.1| protein of hypothetical function DUF81 [Corynebacterium
           lipophiloflavum DSM 44291]
 gi|227080123|gb|EEI18086.1| protein of hypothetical function DUF81 [Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 316

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 83/250 (33%), Gaps = 21/250 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + LI +A      + G  G+G G+    +L     L     S  +H A         
Sbjct: 4   LTTLILIALAGLAGQLVDGGLGMGFGVTSTTMLVMLAGLGPAQASAVVHTAE-------L 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+ +S + H R G ++ K++        +     + ++S++         ++   L+G 
Sbjct: 57  GTTFVSGISHWRFGNVDWKVVASIGIPGAVGAFAGATVLSNLSTEAAKPIMSLILALIGA 116

Query: 140 LMLKR-----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS-IY 193
            ++ R      R     K        + G+  GF+    G G G  T   +L  G S   
Sbjct: 117 NLMLRFSRGLTRRKLGVKPHSRGFLGVLGLFGGFVDATGGGGWGPVTTSTLLSAGRSEPR 176

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +   T       +   A L  +   W                AV  +L   ++  PLA  
Sbjct: 177 RIIGTVNTAEFFVTLAATLGFVLGMWDDLVANLA--------AVAALLIGGVIAAPLAAW 228

Query: 254 LSYMIGKKYL 263
           L   +    L
Sbjct: 229 LVTRLNPILL 238


>gi|88857895|ref|ZP_01132537.1| hypothetical protein PTD2_10934 [Pseudoalteromonas tunicata D2]
 gi|88819512|gb|EAR29325.1| hypothetical protein PTD2_10934 [Pseudoalteromonas tunicata D2]
          Length = 258

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 95/263 (36%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ + +F +G +  + G GGGL+ VP L  A         +  H+ +GT+    +  S+
Sbjct: 12  TILCIVAFAAGFIDAIAG-GGGLLTVPALLTA--------GLPPHLVLGTNKLAASFGSL 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + +    N    K  I    +  ++ +L++ H+   FLNK   I  + + I  L 
Sbjct: 63  TASVTYYKKKLFNPSFWKKSIAATALGALIGTLIVDHLSTDFLNKLLPIVIISVAIYSLF 122

Query: 144 RD-RLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKAT 196
                    + P         +   G+  GF  G  G G G F      + Y  ++    
Sbjct: 123 GSLNHSESVEMPKDIPNLAPKQISQGLALGFFDGVAGPGTGAFWTASNAYLYKMNLLLNC 182

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++ +    +L   I             LG VN    + +    +    L    + 
Sbjct: 183 GVARSMNFVSNVVSLSAFIV------------LGHVNFLLGITMGAFLMFGAWLGAHSAI 230

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G K +   F+ ++   +   A
Sbjct: 231 RFGSKLIRPLFNTMVILLALKLA 253


>gi|313122602|ref|YP_004044529.1| permease [Halogeometricum borinquense DSM 11551]
 gi|312296084|gb|ADQ69173.1| predicted permease [Halogeometricum borinquense DSM 11551]
          Length = 261

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 76/211 (36%), Gaps = 19/211 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++ A   +G ++GL G    +V+ PVL                 A+G SL      S 
Sbjct: 6   LVVLFAGIGAGAVTGLIGASAVVVVTPVLITVLGYNPY-------TAIGISLVTDVFASS 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +S   + R+G I ++      F   +  VV S +   VD + L     +  LLMG+   +
Sbjct: 59  VSAATYWRNGNIRIRGGLTIAFTAVLAAVVGSWLSGDVDPTTLGGLSGVVILLMGVSFTR 118

Query: 144 RDRLYCERKFPDNY-----------VKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGAS 191
           +        F +                + G   G ++G  G GGG+   +++ F     
Sbjct: 119 KSLNERLESFRETADLSAVREHKTVASALAGGFIGTMTGVFGAGGGVMILIILTFILEYE 178

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           ++ A  TS  +    A    +        + 
Sbjct: 179 VHTAVGTSVLIMIFTALSGGVSHFIVESAVP 209


>gi|228997078|ref|ZP_04156709.1| integral membrane protein [Bacillus mycoides Rock3-17]
 gi|229004733|ref|ZP_04162469.1| integral membrane protein [Bacillus mycoides Rock1-4]
 gi|228756526|gb|EEM05835.1| integral membrane protein [Bacillus mycoides Rock1-4]
 gi|228762703|gb|EEM11619.1| integral membrane protein [Bacillus mycoides Rock3-17]
          Length = 262

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 77/197 (39%), Gaps = 14/197 (7%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +I + FL+  +  + G GGGL+ +P L       G+  S     A+ T+    +  S+M
Sbjct: 16  FLIASGFLAAFIDSVVG-GGGLISIPALLF----TGLPPST----AIATNKLASSMGSLM 66

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S +   R G +N K++     +  I  ++ + ++ H+    L     +  + + I  + +
Sbjct: 67  STISFIRSGNVNFKLVSKLFPLTFIGAILGAFVVKHISSEILKPLVLVLLIAVAIYTIMK 126

Query: 145 DRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
                +  +         V      + GF  G  G G G F     L  G    ++   +
Sbjct: 127 KEWGKDASYSGMSVKKRVVFSSVIFIIGFYDGFFGAGTGSFLLFTFLIIGFDFVQSAGNA 186

Query: 200 AGVSALIAFPALLVRIY 216
             ++      AL++ +Y
Sbjct: 187 KVLNFGSNIAALIIFLY 203


>gi|120435315|ref|YP_861001.1| hypothetical protein GFO_0960 [Gramella forsetii KT0803]
 gi|117577465|emb|CAL65934.1| membrane protein containing DUF81 [Gramella forsetii KT0803]
          Length = 266

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LII+   + G L+G+ G GGG +++P L    +L        M  A+ TSL +IA  S++
Sbjct: 151 LIIIEGLVVGLLTGIVGAGGGFLIIPALVILAKL-------PMKKAVATSLMIIAVKSLI 203

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            F+    +  I+ K L  +  +      +   + + ++   L K F  F LLMGI ++
Sbjct: 204 GFIGDVENIEIDWKFLLIFTGISIGGIWLGVYLNNFINGKKLKKGFGWFVLLMGIYII 261



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 90/251 (35%), Gaps = 38/251 (15%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VPVL     +  +        A   SL V+  +S++  + +     I+ +    +  
Sbjct: 28  ILTVPVLVYLMAINPV-------TATAYSLFVVGSSSLVGAIRNIPKKLIDFRTAIVFAI 80

Query: 106 VLPITTVVT-SLMISHVDKSFLNK-------------AFAIFCLLMGILMLKRD----RL 147
              I   +T   ++  + +   +               FAI  ++  I M+         
Sbjct: 81  PAFIAVYLTRKFLVPAIPEEIFSIFGLMITKNIGIMLFFAIIMVIASISMISEKESTQNT 140

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALI 206
             ++   +  +  I G+V G L+G +G GGG      L++     + KA ATS     +I
Sbjct: 141 EEDKVSYNYPLIIIEGLVVGLLTGIVGAGGGFLIIPALVILAKLPMKKAVATSL---MII 197

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           A  +L+  I     +          ++   +LI   ISI    L   L+  I  K L  G
Sbjct: 198 AVKSLIGFIGDVENIE---------IDWKFLLIFTGISIGGIWLGVYLNNFINGKKLKKG 248

Query: 267 FSMIMFTTSFV 277
           F   +      
Sbjct: 249 FGWFVLLMGIY 259


>gi|145638392|ref|ZP_01794002.1| predicted permease [Haemophilus influenzae PittII]
 gi|145272721|gb|EDK12628.1| predicted permease [Haemophilus influenzae PittII]
 gi|309751532|gb|ADO81516.1| Hypothetical protein R2866_1587 [Haemophilus influenzae R2866]
          Length = 269

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 97/264 (36%), Gaps = 12/264 (4%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I ++++    +  +S +FG+GGG++MVP+L   F        + + V   TSL ++  
Sbjct: 4   STIFILLICGICTNMVSAIFGIGGGVLMVPILRTLF------PELPIQVISATSLTIVMC 57

Query: 81  TSVMSF-MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           T++++    H++   I+   +  W   + I   +   +  +   + ++  F +    + I
Sbjct: 58  TALINLLFFHKQKIKIDYINMILWSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAI 117

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMV-----TGFLSGALGVGGGIFTNLLMLFYGASIYK 194
                        F  + ++   G +               GG I   L+    G    +
Sbjct: 118 KTFLNRSRIQIEVFNMSPIERAKGSISFCGGGLIAGITGIGGGSILAPLVGQLKGVKTQQ 177

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
               +  +  +     L   +   +  +      LG+VN   V ++   S  ++  + KL
Sbjct: 178 IAVYTNYMMIIGGIGNLYGYLTRAFPYDISLSGQLGYVNFLVVGVVTLGSFGMSFFSMKL 237

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
             ++         ++I+F  +   
Sbjct: 238 RGLMNPALTRKLLAIILFCIAAYM 261


>gi|188533299|ref|YP_001907096.1| hypothetical protein ETA_11560 [Erwinia tasmaniensis Et1/99]
 gi|188028341|emb|CAO96202.1| Putative permease [Erwinia tasmaniensis Et1/99]
          Length = 265

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 79/187 (42%), Gaps = 13/187 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +C++ + + L+G +  + G GGGL+ VP L  A         +    A+ T+       
Sbjct: 10  LLCVLFLVALLAGFIDSIAG-GGGLLTVPALLAA--------GLSPAQALATNKLQSVGG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + +   R   +N++     I +  + ++  +L++ HV    L +   +  + +G+  
Sbjct: 61  SFSASLYFIRRKAVNLREQWLNIVLTFLGSLAGALLVQHVQGDILRQLLPLLVIAIGLYF 120

Query: 142 LKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   R+     +R+        + G   GF  G  G G G F  L  +   G ++ K+TA
Sbjct: 121 LLMPRIGEDDRQRRLHGLPFALVAGGCVGFYDGFFGPGAGSFYALAFVTLCGYNLAKSTA 180

Query: 198 TSAGVSA 204
            +  ++ 
Sbjct: 181 HAKVLNF 187


>gi|310768213|gb|ADP13163.1| hypothetical protein EJP617_34820 [Erwinia sp. Ejp617]
          Length = 265

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 80/187 (42%), Gaps = 13/187 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +C++ + + L+G +  + G GGGL+ VP L  A         +    A+ T+       
Sbjct: 10  LLCVLFLVALLAGFIDSIAG-GGGLLTVPALLAA--------GLSPAQALATNKLQSVGG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + +   R   ++++  +  I +  + ++  +L++ HV    L +   +  + +G+  
Sbjct: 61  SFSASLYFIRRKAVDLREQRLNIVLTFVGSLAGALLVQHVQGGILRQLLPLLVIAIGLYF 120

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   R+  E   R+        + G   GF  G  G G G F  L  +   G ++ K+TA
Sbjct: 121 LLMPRIGEEDRQRRLHGLPFALVTGGCVGFYDGFFGPGAGSFYALAFVTLCGYNLAKSTA 180

Query: 198 TSAGVSA 204
            +  ++ 
Sbjct: 181 HAKVLNF 187


>gi|312114506|ref|YP_004012102.1| hypothetical protein Rvan_1756 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311219635|gb|ADP71003.1| protein of unknown function DUF81 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 317

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 97/257 (37%), Gaps = 9/257 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+I+     G   GLFG  GGL + P L     L G+       ++  T+L ++ P ++ 
Sbjct: 12  LLILTGGAIGLCFGLFGQAGGLALAPALLIVLPLCGVTAEAAPRLSAATALAILIPVTIG 71

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM--- 141
                      +  ++        +  V+ +++  ++D   +    +   +L+ + +   
Sbjct: 72  QAEGKNSWKATDWDLILLLAPGAAVGAVIAAMVADNLDGRIVALLLSSGPILLALRLSRH 131

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
                   + + P      +  +  G  +   GV  G    L      A   KA AT++ 
Sbjct: 132 AGGGGADGQPRNPSLIALTLKTVAGGAFAALTGVSAG--LVLARSLAKALPSKAAATASA 189

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           ++   AF A +  +     L   P    G + + A+  I   ++LI PLA +L   +   
Sbjct: 190 LTLPFAFTASVGALLVPAPLTCGPA-CAGVIFLPALAAIGMSAVLIAPLALRLRPFLPSA 248

Query: 262 YLTI---GFSMIMFTTS 275
             +     F+M +  T+
Sbjct: 249 PASRSLALFAMALLCTA 265


>gi|108758743|ref|YP_632496.1| hypothetical protein MXAN_4321 [Myxococcus xanthus DK 1622]
 gi|108462623|gb|ABF87808.1| putative membrane protein [Myxococcus xanthus DK 1622]
          Length = 264

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 84/235 (35%), Gaps = 24/235 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP+L                 ++   L V+  TS+     H R G +  K    +  
Sbjct: 25  IITVPILVYVMGF-------GAKESIAMGLAVVGITSLFGAASHWRRGNVQWKAALVFGA 77

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL----YCERKFPDNYVKYI 161
           V    T   + + + +  +     FA   L+  + M +  R       E K     +  +
Sbjct: 78  VAMAGTYAGARLSALISGTTQLLLFATVMLVSAVFMFRNGRKDSVQAPEPKKASFPLMAL 137

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWG 220
             +  G L+G +GVGGG      ++   G  + +A  TS  V AL +       +    G
Sbjct: 138 AALGVGGLTGLVGVGGGFLIVPALVLLVGLPMKQAVGTSLLVIALNSLVGFAGYL----G 193

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
              +P  SLG     AV+ IL        L T  S+ + +  L   FS  +    
Sbjct: 194 HVEVPWVSLGIFTAIAVVGIL--------LGTWASHFVSQATLKAAFSGFLVVMG 240



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 7/101 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            ++VP L            + M  A+GTSL VIA  S++ F  +  H  +    L  +  
Sbjct: 155 FLIVPALVLLV-------GLPMKQAVGTSLLVIALNSLVGFAGYLGHVEVPWVSLGIFTA 207

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           +  +  ++ +     V ++ L  AF+ F ++MG+ +  ++R
Sbjct: 208 IAVVGILLGTWASHFVSQATLKAAFSGFLVVMGVFIFFKNR 248


>gi|117617625|ref|YP_856916.1| hypothetical protein AHA_2401 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559032|gb|ABK35980.1| putative membrane protein [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 259

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 88/249 (35%), Gaps = 25/249 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +  +   + ++G +  + G GGGL+ VP L       G+  ++     +GT+    +
Sbjct: 5   LFTLLALFGVALVAGFIDAIAG-GGGLLTVPALL----ATGMPPALV----LGTNKLQSS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +   + R G +   I+   +    I   + +L +  +D + L +      +    
Sbjct: 56  FGSFSATWFYARKGLLEWHIIWPAVICTFIGAALGTLAVQTIDAAILERLLPFLLMAFAC 115

Query: 140 LMLKRDRLY---CERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
                 R+      R+        + G   GF  G  G G G  F    +   G  + +A
Sbjct: 116 YFFFSPRVSDAESSRRLAPMAFALLVGGGVGFYDGFFGPGTGSFFAIGFVALAGFGMARA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           TA +  ++      +LL     G  +     WS+GF        +     +     +K+ 
Sbjct: 176 TAHTKLLNFTSNIASLLFFALGGKVV-----WSVGF-------CMALGQFIGARFGSKMV 223

Query: 256 YMIGKKYLT 264
              G K + 
Sbjct: 224 LKQGVKLIK 232


>gi|87200655|ref|YP_497912.1| hypothetical protein Saro_2642 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87136336|gb|ABD27078.1| protein of unknown function DUF81 [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 304

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/293 (18%), Positives = 99/293 (33%), Gaps = 56/293 (19%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +I+    L+G LSG+FGVGGG +  P+L       G+  ++    A       +   SV
Sbjct: 15  LVIVGLGALTGLLSGMFGVGGGFLTTPLLIF----YGVPPTVAAASAA----SQVTGASV 66

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMG 138
                H R G I+  I    +    I T + SL+   +       + +N  + +    +G
Sbjct: 67  SGAFAHARRGGIDYHIGAVLVAGGVIGTGLGSLLFRLLQALGQIDTVINILYVLLLGGIG 126

Query: 139 ILML-------------------KRDRLYCERKFP------------DNYVKYIWGMVTG 167
            LM                    KR         P                  + GM TG
Sbjct: 127 GLMAHESMTALRAQKAGIPVPARKRRHHPLVASLPLRWRFYRSGLYISPLAPLLLGMATG 186

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
            L+  +G+GGG      ML+  G  +     TS      +     ++   +         
Sbjct: 187 ILTMLMGIGGGFILVPAMLYILGMGVNVVVGTSLFQILFVTMATTMMHALTTRA------ 240

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                V+I   +++L  S+    +  + +     + L +  ++I+   +   A
Sbjct: 241 -----VDIVLAVLLLVGSVTGAQVGAQFAQKAKPEQLRLILAVIVLLVALRMA 288



 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++    +G L+ L G+GGG ++VP +            + ++V +GTSL  I   ++ + 
Sbjct: 179 LLLGMATGILTMLMGIGGGFILVPAMLYIL-------GMGVNVVVGTSLFQILFVTMATT 231

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H      +++ +    +        V +          L    A+  LL+ + M    
Sbjct: 232 MMHALTTRAVDIVLAVLLLVGSVTGAQVGAQFAQKAKPEQLRLILAVIVLLVALRMALGL 291

Query: 146 RLYCER 151
               + 
Sbjct: 292 GYRPDE 297


>gi|307293196|ref|ZP_07573042.1| protein of unknown function DUF81 [Sphingobium chlorophenolicum
           L-1]
 gi|306881262|gb|EFN12478.1| protein of unknown function DUF81 [Sphingobium chlorophenolicum
           L-1]
          Length = 257

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 92/254 (36%), Gaps = 19/254 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I+  F +  + G  G+  G++     S     +G+  S     A  +       T+
Sbjct: 12  ILPFILIGFGAQMIDGALGMAYGVIS----STLLLALGVPPSR----ASASVHAAETFTT 63

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +S + H  H  ++ ++    I    I  V  + ++SHVD + +      +   +G+ ++
Sbjct: 64  GVSAISHIIHRNVDWRLFARLIIPGVIGGVTGAYLLSHVDGAVIKPFVQFYLTAIGVYLV 123

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            R   Y   +  +       G+V GF+    G G G      +L  GAS      T   V
Sbjct: 124 WRGFHYP-PQARNPKWVGPLGLVGGFMDATGGGGWGPVVTSNLLIQGASPRHTIGTVNSV 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
             ++     L  +    G      +++G         +L   ++  P    L+  +  + 
Sbjct: 183 EFILTLSISLTFLLH-LGWETFTTYTVG---------LLIGGVIAAPFGAMLARHVSPRT 232

Query: 263 LTIGFSMIMFTTSF 276
           L I    I+  TS 
Sbjct: 233 LFIAVGSILTLTSL 246


>gi|239813891|ref|YP_002942801.1| hypothetical protein Vapar_0883 [Variovorax paradoxus S110]
 gi|239800468|gb|ACS17535.1| protein of unknown function DUF81 [Variovorax paradoxus S110]
          Length = 270

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 102/252 (40%), Gaps = 19/252 (7%)

Query: 8   FSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
             ++ FL+ D  +  +C++   +F++G    + G GGGLV VP L  A    G+D     
Sbjct: 1   MDMIGFLAGDHSLSILCILAGVAFIAGAFDAIAG-GGGLVTVPALVIA----GLDPVS-- 53

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
             A+ TS       +V +     R G I  + +     +  + +V+ +L +S V +  + 
Sbjct: 54  --AIATSKLQATLGAVSATTSFGRAGLIEWRRIWPAALLACVGSVLGALAVSSVPQQVVK 111

Query: 128 KAFAIFCLLMGILMLKRDRLY---CERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNL 183
                  + M +      ++      ++           +V GF  GA G G G  F   
Sbjct: 112 TGLPFLLIAMALYFALSPKMTDEDAGQRISMAAFCATAAVVIGFYDGAFGPGTGSFFMIA 171

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN-IGAVLIILP 242
            +L  G  + +ATA +  ++      +L + ++ G     L  W +G V  +GA +  L 
Sbjct: 172 FVLLLGWGVVRATAHTKLLNLASILGSLSIYLFHG-----LVHWRIGVVMGLGAFIGALV 226

Query: 243 ISILITPLATKL 254
            S L      +L
Sbjct: 227 GSRLAIRAGARL 238


>gi|239828234|ref|YP_002950858.1| hypothetical protein GWCH70_2913 [Geobacillus sp. WCH70]
 gi|239808527|gb|ACS25592.1| protein of unknown function DUF81 [Geobacillus sp. WCH70]
          Length = 272

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 94/275 (34%), Gaps = 34/275 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+++  FL+GT+  L G+GGG+++VP L            +    A+GTSL VI    +
Sbjct: 4   VLLVIVGFLAGTIGSLVGLGGGVIIVPSLLFL-GATHWLPHVTPQAAVGTSLVVIIFNGL 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + +   ++ +    +        ++ + M + +     +  F +F + +   +  
Sbjct: 63  SSTLSYMKEKMVDYQSGLLFFIGSGPGAIIGAWMNNKLSLEHFSFYFGLFLIAVSFFLSF 122

Query: 144 RDRLYCERKFP------------DNYVKYIWGMVTGFLSG---------ALGVGGGIFTN 182
                   +                 V Y +  +   +               GG +   
Sbjct: 123 SKNASVRSQRKTFKITRTYTTNEGETVTYGYNPIVAIVISFIVGFFGGIFGIGGGSLMVP 182

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            +M+ +    + A ATS  +  L +  + L  I+            +G V     L ++P
Sbjct: 183 AMMILFFFPPHVAVATSMLMIFLSSLVSSLTHIF------------MGNVQWLFALALIP 230

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                      ++  +  K + I   +++      
Sbjct: 231 GVWFGAKTGAFINKRLRSKTVVIFLRLVLVLLGIR 265



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 7/97 (7%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP +   F           HVA+ TS+ +I  +S++S + H   G +        I  
Sbjct: 179 LMVPAMMILFFF-------PPHVAVATSMLMIFLSSLVSSLTHIFMGNVQWLFALALIPG 231

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +       + +   +    +     +  +L+GI ++ 
Sbjct: 232 VWFGAKTGAFINKRLRSKTVVIFLRLVLVLLGIRLIY 268


>gi|306840233|ref|ZP_07473007.1| Protein of unknown function DUF81 [Brucella sp. BO2]
 gi|306289760|gb|EFM60942.1| Protein of unknown function DUF81 [Brucella sp. BO2]
          Length = 261

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 98/259 (37%), Gaps = 27/259 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+  A+F++G +  + G GGG++ +P L     L GI        A+GT+       S 
Sbjct: 10  LLLTAAAFIAGIIDSIAG-GGGMITIPALL----LAGIPPVE----ALGTNKLQGLFGSS 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + R G +N+           + +V+ +L+ + +  + +  A  I  + + I    
Sbjct: 61  SATIAYARKGHVNILQQWPEALASLLGSVLGALLATVLPVNIMRAALPILLIAIAIYFAL 120

Query: 144 RDRLYCERKFPDNYVKYIWGM----VTGFLSGALGVG-GGIFTNLLMLFYGASIYKATAT 198
           +  L    +       +++G+    + GF  G  G G G  F    + F G  + KATA 
Sbjct: 121 KPSLGDIDRA-RRIGPFLFGVTLVPLIGFYDGLFGPGTGSFFMLAFVAFAGYGVLKATAH 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++                        ++G +N    + +     +   +  +L+  I
Sbjct: 180 TKLLNCASNIGGFATFA------------AVGVINWKIGISMGIAQFIGAQIGARLAMKI 227

Query: 259 GKKYLTIGFSMIMFTTSFV 277
           G + +     ++    +  
Sbjct: 228 GSRIIKPLLIVVSLALAVR 246



 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 13/124 (10%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
             +      + G +    G GGG+ T   +L  G    +A  T+       +  A +   
Sbjct: 9   TLLLTAAAFIAGIIDSIAG-GGGMITIPALLLAGIPPVEALGTNKLQGLFGSSSATIAYA 67

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                         G VNI         S+L + L   L+ ++    +     +++   +
Sbjct: 68  RK------------GHVNILQQWPEALASLLGSVLGALLATVLPVNIMRAALPILLIAIA 115

Query: 276 FVFA 279
             FA
Sbjct: 116 IYFA 119


>gi|255101133|ref|ZP_05330110.1| hypothetical protein CdifQCD-6_10019 [Clostridium difficile
           QCD-63q42]
          Length = 250

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 101/254 (39%), Gaps = 27/254 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + +  FL+  +  + G GGGL+ +PVL            + +H+A+GT+    +   
Sbjct: 4   VIFLCIGGFLAAFVDSIAG-GGGLISMPVLMAI--------GVPVHLAIGTNKFAASAGC 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   + + G IN  +LK  +    I +V+    +  + +  LN    +  L++ I   
Sbjct: 55  ISSAYRYAKSGKINNDLLKKLVPFTIIGSVLGVRCVLSISEEILNVLVVVMILIVAIYTF 114

Query: 143 KRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
               L  E  F      +  +  +  ++ GF  G  G G G F     +  YG     A+
Sbjct: 115 ISKNLGQEDNFEAVNKKNLRLGMLMALIMGFYDGFFGPGTGTFLTFGFIKIYGYDFLHAS 174

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++      +LL+ + +G             V+    ++   + I+   +  K++ 
Sbjct: 175 ANTKILNLTSNITSLLLFMINGQ------------VDYKIAIVFALVMIMGAYVGAKVAI 222

Query: 257 MIGKKYLTIGFSMI 270
             G K +   F ++
Sbjct: 223 KKGSKMIKPIFLVM 236


>gi|229083592|ref|ZP_04215921.1| integral membrane protein [Bacillus cereus Rock3-44]
 gi|228699724|gb|EEL52380.1| integral membrane protein [Bacillus cereus Rock3-44]
          Length = 256

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 78/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +  +  I L++   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSLQIIVLLVAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLPPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 S+ S +   R   ++ +I+   I +  I  V+ +L++  +    L     +  +
Sbjct: 53  LASTMGSLTSTIYFIRSKKVDFRIVGKLIPLTIIGAVLGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + Y   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIVKKDWGSVSTYKKMTKGKTLIFYFVILIIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A    ++ +    +L+  ++
Sbjct: 173 DFIRAAAAGKVLNFVSNIVSLITFLF 198


>gi|293192395|ref|ZP_06609506.1| putative integral membrane protein [Actinomyces odontolyticus
           F0309]
 gi|292820310|gb|EFF79304.1| putative integral membrane protein [Actinomyces odontolyticus
           F0309]
          Length = 266

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 84/271 (30%), Gaps = 31/271 (11%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I   ++     G + G  G GGG++ VP+L               H A G SL ++  T
Sbjct: 1   MIVEALLIGAFVGIVVGSLGAGGGILSVPILVYIL-------GQDPHQATGLSLIIVGLT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + +S     R G +  +    +     + T   S +   +    L  +F      + + M
Sbjct: 54  AAVSLATRARSGNVAWREGALFALAGLVGTWAGSALGPLISARALMLSFCALLGAVAVFM 113

Query: 142 LKRDRLYCERKFPDNYVKY-----------------IWGMVTGFLSGALGVGGGIFTNLL 184
           ++           D                      +  +           GG      L
Sbjct: 114 VRSQIRPSASSSSDEAGDTKVDKGTWTLTTAFRVVALATLTGFLTGFFGVGGGFAIVPAL 173

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
            L     + +A+ATS  V  + A   L  R  +G          +       + +    S
Sbjct: 174 HLALRYPMKRASATSLLVMVITAAFGLASRTLAGTLTITAEAGVM-------ITLFTAAS 226

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +    +  KL+  +  + L + F+ ++   +
Sbjct: 227 MGGGIVGAKLTKRVSNRVLGLVFAALLVCVA 257


>gi|262372584|ref|ZP_06065863.1| conserved hypothetical protein [Acinetobacter junii SH205]
 gi|262312609|gb|EEY93694.1| conserved hypothetical protein [Acinetobacter junii SH205]
          Length = 295

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 53/278 (19%), Positives = 92/278 (33%), Gaps = 44/278 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  L G   G+ GVGGG +M P+L   F+       I  H+A+GT L   + +    
Sbjct: 7   FIMAGVLVGFCVGITGVGGGSLMTPILISLFK-------IEPHIAIGTDLLYASISKFCG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
            + H +   I   I+    F     +  TS ++ H           L         L GI
Sbjct: 60  SVVHAKKLNIVWPIVIWLAFGSIPASFATSWVLEHYLSQSTHYKAVLTMVLGFMLTLTGI 119

Query: 140 ---------LMLKRDRLYCERKFPD--------NYVKYIWGMVTGFLSGALGVGGGIFTN 182
                        R R   +              +   I G++ G       VG G F  
Sbjct: 120 SIVFRAQIEKFFDRFRNREQANMESEQHALQHKRHYIVIMGIILGVFVTLSSVGAGAFGI 179

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
           + ++       + +   +    + L+              + GL   S G V+   ++ +
Sbjct: 180 MALVIMFPNLPMIRIIGSDVVHAVLLT------------AVAGLSHMSSGNVDFTLLMWL 227

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L  SI      T +S  + ++ +     + +F     F
Sbjct: 228 LVGSIPAIIAGTLISSHMPERLIRKILGITLFALGINF 265



 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 48/128 (37%), Gaps = 7/128 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            I++   + G    L  VG G   +  L   F       ++ M   +G+ +      + +
Sbjct: 155 YIVIMGIILGVFVTLSSVGAGAFGIMALVIMF------PNLPMIRIIGSDVVHAVLLTAV 208

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-MLK 143
           + + H   G ++  +L   +       +  +L+ SH+ +  + K   I    +GI  M+ 
Sbjct: 209 AGLSHMSSGNVDFTLLMWLLVGSIPAIIAGTLISSHMPERLIRKILGITLFALGINFMVN 268

Query: 144 RDRLYCER 151
             +   + 
Sbjct: 269 PIKAKPKP 276


>gi|89894646|ref|YP_518133.1| hypothetical protein DSY1900 [Desulfitobacterium hafniense Y51]
 gi|219669083|ref|YP_002459518.1| hypothetical protein Dhaf_3059 [Desulfitobacterium hafniense DCB-2]
 gi|89334094|dbj|BAE83689.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219539343|gb|ACL21082.1| protein of unknown function DUF81 [Desulfitobacterium hafniense
           DCB-2]
          Length = 251

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 103/265 (38%), Gaps = 27/265 (10%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++D I L+ +  F++  +  + G GGGL+ +P L            +  H A+GT+    
Sbjct: 1   MLDDIILLCILGFIAALIDAIAG-GGGLISLPALLLV--------GVPPHHALGTNKFAS 51

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              S+ S M + R G +   ++K  I    + T      + H+    L KA  +  LL+G
Sbjct: 52  TIGSLTSSMTYARSGKVFFSVVKWQIPFTLMGTCFGVWSVLHLSADLLTKAVPVLILLVG 111

Query: 139 ILMLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
              L +  L  E +F        +  +++    GF  G  G G G       +  YG + 
Sbjct: 112 FYTLWQKNLGVEDRFQGVTPLKRFWGFLFAFALGFYDGFFGPGTGAFLIFGYITLYGFNF 171

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             ++A +  ++ +    +L++   SG  +     ++ G       + +     L + + T
Sbjct: 172 IVSSANAKVLNFVSNLVSLILFAISGKII-----YAYG-------IPMALSMFLGSRIGT 219

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
            L+   G   +   F  +    +  
Sbjct: 220 TLAIRKGSALIKPIFITMSLLVALK 244


>gi|313607064|gb|EFR83592.1| permease [Listeria monocytogenes FSL F2-208]
          Length = 279

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 86/258 (33%), Gaps = 48/258 (18%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+  F        I +  A+G S+  +  TS  S + + + G  N+++         I
Sbjct: 33  PALTLIF-------GIDIQYAIGASIISVIATSSGSAIAYIKDGITNLRVGMFLEIATTI 85

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR------------------------- 144
             +  + +   +  + L   F +  L     M+K+                         
Sbjct: 86  GAITGAFVSGLLSATALYIIFGLLLLYSAFNMIKKVGTEFPTNVKPDPLATKLNLHDSYY 145

Query: 145 ---DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA 200
               R   + +  +    +      G  SG LG+G G F  + + +F    +  ++ATS 
Sbjct: 146 DKSLRQTVDYQVANVPAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSATSX 205

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  + A  +  V ++ G     +               +    ++   L T++   +  
Sbjct: 206 XMMGVTAAASATVYLFQGDIQPAI------------AAPVAIGVLVGATLGTRIMQRLKS 253

Query: 261 KYLTIGFSMIMFTTSFVF 278
           K + I F  ++   +F  
Sbjct: 254 KVIRIIFIPVILYVAFQM 271



 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  SGL G+G G   V  L        +   + + V+  TS  ++  T+  S   +   
Sbjct: 170 AGIASGLLGIGSGAFKVMAL-------DVFMKMPLKVSSATSXXMMGVTAAASATVYLFQ 222

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           G I   I       + +   + + ++  +    +   F    L +   M+ 
Sbjct: 223 GDIQPAIAAPVAIGVLVGATLGTRIMQRLKSKVIRIIFIPVILYVAFQMIL 273


>gi|297617398|ref|YP_003702557.1| hypothetical protein Slip_1219 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145235|gb|ADI01992.1| protein of unknown function DUF81 [Syntrophothermus lipocalidus DSM
           12680]
          Length = 119

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 8/124 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-T 81
           I + +    ++G LSGL G+ GG+V++P L   F             A GT+L ++ P  
Sbjct: 3   IIMYVALGLVAGVLSGLLGIAGGIVIIPSLVFLFGF-------SQQQAQGTTLALMVPPI 55

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            +++   + + G +++K        + +  +  + + + +  S L K F +  LL+GI M
Sbjct: 56  GILAAWTYYQKGFVDLKAAGLICLGVFVGGLFGARIATALPASALQKVFGVLVLLVGIKM 115

Query: 142 LKRD 145
           +   
Sbjct: 116 ILNR 119



 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 14/121 (11%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSAL-IAFPALLVRIYS 217
              G+V G LSG LG+ GGI     ++F +G S  +A  T+  +    I   A       
Sbjct: 7   VALGLVAGVLSGLLGIAGGIVIIPSLVFLFGFSQQQAQGTTLALMVPPIGILAAWTY--- 63

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  GFV++ A  +I     +      +++  +    L   F +++      
Sbjct: 64  ---------YQKGFVDLKAAGLICLGVFVGGLFGARIATALPASALQKVFGVLVLLVGIK 114

Query: 278 F 278
            
Sbjct: 115 M 115


>gi|256826570|ref|YP_003150529.1| putative permease [Cryptobacterium curtum DSM 15641]
 gi|256582713|gb|ACU93847.1| predicted permease [Cryptobacterium curtum DSM 15641]
          Length = 302

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 96/280 (34%), Gaps = 69/280 (24%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V+VP+L   F    I+       A  TSL  I PTSV   + H RH T  + +      
Sbjct: 28  TVIVPLLRLGFGFAAIE-------ATATSLFAIIPTSVAGVVGHLRHRTCVVGVGVAAGL 80

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR------------DRLYCERKF 153
              +T+ +   +        +  A A+      + MLK+               +     
Sbjct: 81  AGALTSPIGVQLADRSPSWAIMLAAALVIGYSAVTMLKKALVSSHVTSSHAASPHVPHAM 140

Query: 154 PDN-------------------------------------YVKYIWGMVTGFLSGALGVG 176
           P                                        V  + G++ G  SG +GVG
Sbjct: 141 PSQDASPHVASSHAISPYVAQESIKKSINAHRVHATCHQILVGALSGLIAGLASGYVGVG 200

Query: 177 GGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           GG       + F G S+ +++ TS    A++A P ++ ++            +LG V + 
Sbjct: 201 GGFIMVPLFVSFAGISMKQSSGTSLIGVAILAIPGVISQM------------TLGNVQVL 248

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             L +   S+       +L  +I ++ L + F M++   +
Sbjct: 249 PGLALALGSVPGALWGARLVQVIPERSLRLLFGMVLVLMA 288



 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I +  ++  ++G  SG  GVGGG +MVP+             I M  + GTSL  +A  +
Sbjct: 180 ILVGALSGLIAGLASGYVGVGGGFIMVPLFVSF-------AGISMKQSSGTSLIGVAILA 232

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   +     G + +              +  + ++  + +  L   F +  +LM   ++
Sbjct: 233 IPGVISQMTLGNVQVLPGLALALGSVPGALWGARLVQVIPERSLRLLFGMVLVLMACALV 292

Query: 143 KRD 145
             +
Sbjct: 293 FNE 295


>gi|120599392|ref|YP_963966.1| hypothetical protein Sputw3181_2588 [Shewanella sp. W3-18-1]
 gi|146292612|ref|YP_001183036.1| hypothetical protein Sputcn32_1512 [Shewanella putrefaciens CN-32]
 gi|120559485|gb|ABM25412.1| protein of unknown function DUF81 [Shewanella sp. W3-18-1]
 gi|145564302|gb|ABP75237.1| protein of unknown function DUF81 [Shewanella putrefaciens CN-32]
 gi|319425913|gb|ADV53987.1| protein of unknown function DUF81 [Shewanella putrefaciens 200]
          Length = 257

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 91/263 (34%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ +   ++G +  + G GGGL+ +P L            I  H A+GT+    +  S 
Sbjct: 11  ALLAIIGLIAGFIDAIVG-GGGLLSIPALLTL--------GIAPHTALGTNKLAASFGSS 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+   + R                 I  V+ S+++  +D  +L K   +  + + I  L 
Sbjct: 62  MAAWTYYRQHLFTPSFWYMAFIATFIGAVLGSVLVYLIDTQWLEKILPLLIIGIAIYSLL 121

Query: 144 RDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
                         + P    + + G++ G   G  G G G F T      Y   +  + 
Sbjct: 122 SPSAISDTDCQVPIQSPPTQKQGLQGLILGAYDGFAGPGIGAFWTVSSGSLYKLPLLHSC 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++      AL +  +            LG V     L +    +L + +  + + 
Sbjct: 182 GLARAMTFTSNLTALAIFGW------------LGQVQWQIGLWMGLCMMLGSFIGARCAI 229

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F +I+   +   A
Sbjct: 230 KFGMPFIRPLFILIVLLIAANLA 252


>gi|90579528|ref|ZP_01235337.1| hypothetical protein VAS14_01161 [Vibrio angustum S14]
 gi|90439102|gb|EAS64284.1| hypothetical protein VAS14_01161 [Vibrio angustum S14]
          Length = 260

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 100/265 (37%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  ++   L+   + L+G +  + G GGGL+ VP L       GI  +      + T+  
Sbjct: 2   ELTLEIFVLLFFVAGLAGFIDAIAG-GGGLLTVPALLSV----GIPPAQV----LATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  S  + +   R+G + +K ++  I      + + +L++ H+D   L     +  + 
Sbjct: 53  QSSFGSFSASLYFVRNGLVKLKDMRLAIACTFTGSAIGALLVQHIDAGILTSLIPLLLIF 112

Query: 137 MGILMLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           + +  L      +   + K  +    +  G   GF  G  G G G    +  +      +
Sbjct: 113 VSLYFLFSPNIGKPQGDPKLSEAMFAFAVGTSIGFYDGFFGPGTGSLFTICFVSIAKFGL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++      AL   I +G     LP W LG       LI+     +   L  
Sbjct: 173 VEATARTKILNFTSNIAALTFFIIAG-----LPLWKLG-------LIMAAGGFIGARLGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
            +    G+K++     ++    +  
Sbjct: 221 HIVINKGQKFIRPMVIIMSMIMAIK 245


>gi|145299216|ref|YP_001142057.1| hypothetical protein ASA_2258 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851988|gb|ABO90309.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 259

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 89/249 (35%), Gaps = 25/249 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +  +   + ++G +  + G GGGL+ VP L       G+  ++     +GT+    +
Sbjct: 5   LFTLLALFGVALIAGFIDAIAG-GGGLLTVPALL----ATGMPPALV----LGTNKLQSS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +   + R G +   ++   +    I   + +L +  +D + L +      +    
Sbjct: 56  FGSFSATWFYARKGLLEWAMIWPAVICTFIGAAIGTLAVQTIDAAILERLLPFLLMAFAC 115

Query: 140 LMLKRDRLY---CERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
                 R+      R+        + G   GF  G  G G G  F    +   G  + +A
Sbjct: 116 YFFFSPRVSDAESARRLTPMVFALLVGGGVGFYDGFFGPGTGSFFAIGFVALAGFGMARA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           TA +  ++      +LL     G  +     WS+GF        +     +   + ++L 
Sbjct: 176 TAHTKLLNLTSNLASLLFFALGGKVV-----WSVGF-------CMALGQFIGARVGSRLV 223

Query: 256 YMIGKKYLT 264
              G K + 
Sbjct: 224 LKKGVKLIK 232


>gi|254420418|ref|ZP_05034142.1| conserved domain protein, putative [Brevundimonas sp. BAL3]
 gi|196186595|gb|EDX81571.1| conserved domain protein, putative [Brevundimonas sp. BAL3]
          Length = 264

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/218 (22%), Positives = 85/218 (38%), Gaps = 19/218 (8%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           H+A+GTS   +A  +  + + H RHGT+  KI   +     +  V+ S +   VD   L 
Sbjct: 47  HLAIGTSAFAVAANAFANLLNHARHGTVKWKIAGLFALAGVLGAVLGSTLGKAVDGQKLL 106

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFP----DNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
             FA+  L++G LML+      +        +       G++TG +SG  G+GGG     
Sbjct: 107 ALFAVLMLIVGALMLRGRSAAGDPDVVLTPGNAPKLIGTGVLTGVMSGFFGIGGGFLIVP 166

Query: 184 -LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            LM+     IY A  +S                  GW            V+     I + 
Sbjct: 167 SLMVSTRMPIYYAVGSSLVGVTAFGLTTAFNYALDGW------------VDWPLAAIFIG 214

Query: 243 ISILITPLATKLSYMIGKKY--LTIGFSMIMFTTSFVF 278
             +L   L  +L+  +  +   L   F++++F  +   
Sbjct: 215 GGVLGGLLGARLAKSLSGQKGVLNTVFAILIFVVAVYM 252



 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 56/122 (45%), Gaps = 9/122 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I    L+G +SG FG+GGG ++VP L        +   + ++ A+G+SL  +    + +
Sbjct: 142 LIGTGVLTGVMSGFFGIGGGFLIVPSLM-------VSTRMPIYYAVGSSLVGVTAFGLTT 194

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS--FLNKAFAIFCLLMGILMLK 143
              +   G ++  +   +I    +  ++ + +   +      LN  FAI   ++ + ML 
Sbjct: 195 AFNYALDGWVDWPLAAIFIGGGVLGGLLGARLAKSLSGQKGVLNTVFAILIFVVAVYMLY 254

Query: 144 RD 145
           R 
Sbjct: 255 RS 256


>gi|196248273|ref|ZP_03146974.1| protein of unknown function DUF81 [Geobacillus sp. G11MC16]
 gi|196211998|gb|EDY06756.1| protein of unknown function DUF81 [Geobacillus sp. G11MC16]
          Length = 295

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 92/263 (34%), Gaps = 26/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +   F++  + G  G+  G+     L   F +     S  +H+A          T+
Sbjct: 4   LIVFVFVGFIAQLIDGSLGMAYGVTST-TLLLTFGIAPAVASASVHLAE-------VVTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H + G I+  ++   I    +   V +  +S++    +    ++F L +G  ++
Sbjct: 56  AASGVSHWKFGNIDRDMVVKLIIPGSVGAFVGACFLSNLPGDLIKPCISLFLLALGFYII 115

Query: 143 KRDRLYCERKFPDNYVKYI------WGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKA 195
            R      R    +  ++        G+  GFL    G G G     ++L        K 
Sbjct: 116 YRFLFLNGRSSSKSKKQWSNKQLIPLGLTAGFLDATGGGGWGPIATPILLANKSTEARKV 175

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             T       IA  A L    S GW            VN   VL ++   I+  P+A  L
Sbjct: 176 IGTVDTSEFAIALSATLGFAISLGWEQ----------VNWYWVLTLMAGGIVAAPIAAWL 225

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +    L +    ++  T+  
Sbjct: 226 VRKLPSHLLGVLVGGLIILTNAR 248



 Score = 38.9 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 43/138 (31%), Gaps = 4/138 (2%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I     +G L    G G G +  P+L          ++  +   + TS   IA ++ + 
Sbjct: 138 LIPLGLTAGFLDATGGGGWGPIATPILL----ANKSTEARKVIGTVDTSEFAIALSATLG 193

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           F        +N   +   +    +   + + ++  +    L        +L     L   
Sbjct: 194 FAISLGWEQVNWYWVLTLMAGGIVAAPIAAWLVRKLPSHLLGVLVGGLIILTNARTLLHA 253

Query: 146 RLYCERKFPDNYVKYIWG 163
                  +P  Y   + G
Sbjct: 254 WEVPAPVYPTVYGLIVIG 271


>gi|170290371|ref|YP_001737187.1| permease [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174451|gb|ACB07504.1| Predicted permease [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 285

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 59/118 (50%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++AS+L+G +S + G+GGG++ VP++++         ++ M  A+ TS  +I  T+    
Sbjct: 170 LIASYLAGIISAMLGLGGGIIKVPIMNQLM-------NVPMKAAVATSKFMIGVTASTGA 222

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +  +G +N + +      + I     + +++ +  SF+   F +  L     M+ R
Sbjct: 223 LLYLAYGLVNGEAVAPVAVGVMIGATAGTYVMNRMKASFIKLTFGLLLLYFAYNMILR 280



 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 94/290 (32%), Gaps = 54/290 (18%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+++   ++G    + G+GGG++++P L   F          +  A+  S+  +  TS+
Sbjct: 7   LLMLLMGTIAGLFGAVLGIGGGVIIIPCLVMFFGF-------SIKEAIAVSIVSVVATSI 59

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +      N+++            V  +L+   +  S L     +  + + I  + 
Sbjct: 60  AGASRYVDQRMTNVRLGMFLETATTAGAVSGALLTIKMPSSLLYLMMGLLLIYLSISQIS 119

Query: 144 RDRLYCER----------------------------------KFPDNYVKYIWGMVTGFL 169
             R   E+                                           I   + G +
Sbjct: 120 TRRREEEKLRKDLFLGKEDGIARKLGFSNSYPDLAEGKEVKYTVVRTKSGLIASYLAGII 179

Query: 170 SGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           S  LG+GGGI    +M       +  A ATS  +  + A    L+ +  G          
Sbjct: 180 SAMLGLGGGIIKVPIMNQLMNVPMKAAVATSKFMIGVTASTGALLYLAYGL--------- 230

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              VN  AV  +    ++     T +   +   ++ + F +++   ++  
Sbjct: 231 ---VNGEAVAPVAVGVMIGATAGTYVMNRMKASFIKLTFGLLLLYFAYNM 277


>gi|119485715|ref|ZP_01619990.1| hypothetical protein L8106_25070 [Lyngbya sp. PCC 8106]
 gi|119457040|gb|EAW38167.1| hypothetical protein L8106_25070 [Lyngbya sp. PCC 8106]
          Length = 297

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/308 (17%), Positives = 106/308 (34%), Gaps = 70/308 (22%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +  + V+   +G L+G  G+GGG V+VP++      +G +       A+ TS   I 
Sbjct: 3   ISELLTLAVSGIFAGILAGFLGIGGGTVLVPMML----GLGYEPIN----AVATSTLSIM 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLP----ITTVVTSLMISHVDKSFLNKAFAIFCL 135
            TS+   +++ R G +++  +    F       I   + +L  S +          +   
Sbjct: 55  ITSISGSIQNWRMGYLSLNRVIGIGFPALVTAQIGAYLANLFSSQILLILFGLLLLLNIY 114

Query: 136 LMGIL---------------------------------------------MLKRDRLYCE 150
           L+ +                                              ++   +   +
Sbjct: 115 LVEVRKKVTKQKKKQEENQNSSEFSSYPQNSTSLNLIPETLFPITPHPLSLVFEYQQNSK 174

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL-MLFYGASIYKATATSAGVSALIAFP 209
           +       + I G + G L+G  G+GGG+    L +L    +I  A  TS GV  + AF 
Sbjct: 175 QIQSQQIAQIITGSLAGLLAGLFGIGGGVIMVPLQILLLNETIKTAIQTSLGVIVITAFS 234

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           A L                 G V      I+    +L    +T+    + +K +++ F  
Sbjct: 235 ACLGHALQ------------GNVIWITGTILGLGGLLGAQFSTRFLPNLSEKTVSLAFKS 282

Query: 270 IMFTTSFV 277
           ++F  S  
Sbjct: 283 LLFILSIY 290



 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 52/116 (44%), Gaps = 7/116 (6%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
              L+G L+GLFG+GGG++MVP+            +  +  A+ TSLGVI  T+  + + 
Sbjct: 186 TGSLAGLLAGLFGIGGGVIMVPLQILLL-------NETIKTAIQTSLGVIVITAFSACLG 238

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           H   G +             +    ++  + ++ +  ++ AF     ++ I +  +
Sbjct: 239 HALQGNVIWITGTILGLGGLLGAQFSTRFLPNLSEKTVSLAFKSLLFILSIYIFWK 294


>gi|16804442|ref|NP_465927.1| hypothetical protein lmo2404 [Listeria monocytogenes EGD-e]
 gi|217963492|ref|YP_002349170.1| transport protein [Listeria monocytogenes HCC23]
 gi|224500149|ref|ZP_03668498.1| hypothetical protein LmonF1_10899 [Listeria monocytogenes Finland
           1988]
 gi|224503448|ref|ZP_03671755.1| hypothetical protein LmonFR_13222 [Listeria monocytogenes FSL
           R2-561]
 gi|226224955|ref|YP_002759062.1| hypothetical protein Lm4b_02376 [Listeria monocytogenes Clip81459]
 gi|254825472|ref|ZP_05230473.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|254827982|ref|ZP_05232669.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|254831173|ref|ZP_05235828.1| hypothetical protein Lmon1_07423 [Listeria monocytogenes 10403S]
 gi|254853590|ref|ZP_05242938.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|254933169|ref|ZP_05266528.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|300765264|ref|ZP_07075249.1| hypothetical protein LMHG_11350 [Listeria monocytogenes FSL N1-017]
 gi|16411892|emb|CAD00482.1| lmo2404 [Listeria monocytogenes EGD-e]
 gi|217332762|gb|ACK38556.1| transport protein [Listeria monocytogenes HCC23]
 gi|225877417|emb|CAS06131.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258600365|gb|EEW13690.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258606964|gb|EEW19572.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|293584727|gb|EFF96759.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|293594714|gb|EFG02475.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|300514085|gb|EFK41147.1| hypothetical protein LMHG_11350 [Listeria monocytogenes FSL N1-017]
 gi|328465271|gb|EGF36528.1| hypothetical protein LM1816_13835 [Listeria monocytogenes 1816]
 gi|328471468|gb|EGF42362.1| hypothetical protein LM220_13870 [Listeria monocytogenes 220]
 gi|332312835|gb|EGJ25930.1| Membrane protein [Listeria monocytogenes str. Scott A]
          Length = 279

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 86/258 (33%), Gaps = 48/258 (18%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+  F        I +  A+G S+  +  TS  S + + + G  N+++         I
Sbjct: 33  PALTLIF-------GIDIQYAIGASIISVIATSSGSAIAYIKDGITNLRVGMFLEIATTI 85

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR------------------------- 144
             +  + +   +  + L   F +  L     M+K+                         
Sbjct: 86  GAITGAFVSGLLSATALYIIFGLLLLYSAFNMIKKVGTEFPTNVKPDPLATKLNLHDSYY 145

Query: 145 ---DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA 200
               R   + +  +    +      G  SG LG+G G F  + + +F    +  ++ATS 
Sbjct: 146 DKSLRQTVDYQVANVPAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSATSN 205

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  + A  +  V ++ G     +               +    ++   L T++   +  
Sbjct: 206 LMMGVTAAASATVYLFQGDIQPAI------------AAPVAIGVLVGATLGTRIMQRLKS 253

Query: 261 KYLTIGFSMIMFTTSFVF 278
           K + I F  ++   +F  
Sbjct: 254 KVIRIIFIPVILYVAFQM 271



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  SGL G+G G   V         + +   + + V+  TS  ++  T+  S   +   
Sbjct: 170 AGIASGLLGIGSGAFKV-------MALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQ 222

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           G I   I       + +   + + ++  +    +   F    L +   M+ 
Sbjct: 223 GDIQPAIAAPVAIGVLVGATLGTRIMQRLKSKVIRIIFIPVILYVAFQMIL 273


>gi|171185638|ref|YP_001794557.1| hypothetical protein Tneu_1182 [Thermoproteus neutrophilus V24Sta]
 gi|170934850|gb|ACB40111.1| protein of unknown function DUF81 [Thermoproteus neutrophilus
           V24Sta]
          Length = 283

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 92/290 (31%), Gaps = 52/290 (17%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
               +   S  +G +  L G+GGG+V+VP+   A         + +  A G SL     T
Sbjct: 6   LFAALFTTSVFAGFVGALTGLGGGVVLVPIYVLAL-------GVPVEYAAGASLVSTIAT 58

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN----KAFAIFCLLM 137
           S+ +   + R    N++I         +  +  SL  + +  S L       F    +  
Sbjct: 59  SLATSAAYVRDRLTNVRIGMSLEISTTLGALAGSLTAAWIYASGLQRVVYLVFGAVLIFS 118

Query: 138 GILMLKRDRLYCERKFP----------------------------DNYVKYIWGMVTGFL 169
             +     +L    + P                              ++  +     G +
Sbjct: 119 SYMQWAVAKLGERPRPPPDRWTSFLKLRGRYYDVVRRETVEYYGVRWWLGALIMFGAGLV 178

Query: 170 SGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG LG+GGG    L M +     I  +TATS  +  + A     V    G+    L   +
Sbjct: 179 SGFLGIGGGALKVLAMDWAMALPIKVSTATSNFMIGVTAATGTAVYWVHGYIQPFLAAAT 238

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                           +    + +K+   +  + + + F+ ++       
Sbjct: 239 ------------ALGVLAGAYVGSKVLPRLRGRSVRLFFAAVVLLLGVQM 276



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 7/125 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +  F +G +SG  G+GGG + V  +  A        ++ + V+  TS  +I  T+ 
Sbjct: 166 WLGALIMFGAGLVSGFLGIGGGALKVLAMDWAM-------ALPIKVSTATSNFMIGVTAA 218

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +  HG I   +       +     V S ++  +    +   FA   LL+G+ M+ 
Sbjct: 219 TGTAVYWVHGYIQPFLAAATALGVLAGAYVGSKVLPRLRGRSVRLFFAAVVLLLGVQMML 278

Query: 144 RDRLY 148
           R    
Sbjct: 279 RGIWS 283


>gi|303231307|ref|ZP_07318043.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302514037|gb|EFL56043.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6]
          Length = 264

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 100/253 (39%), Gaps = 26/253 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + L+ VA   +G +  + G GGGL+ VP +           ++   VA+G++     
Sbjct: 14  VMILILLAVAGAFAGFVDSIVG-GGGLISVPAMLL--------TNLPPSVALGSNKLSSI 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  + +   R+  ++ ++++  +    I +++ +L +  +   ++     +  + + +
Sbjct: 65  FGAGSASITFLRNHMVDFRLVRKLLPFTFIGSMLGTLAVVSLPPLYVKPIIIVLLVAVTL 124

Query: 140 LMLKRDRLYCERKFPDNYVKYI-----WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            ++ +       +      + +     + +  G   G +G G G F  +  +F G     
Sbjct: 125 FVVFKKNWGEVNRTSQVMGRALYICMAFALGIGIYDGFIGPGTGTFLIMGFIFTGFDFLH 184

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A +  ++      +LLV +Y            LG VNI   L      ++   L + L
Sbjct: 185 ASANAKILNFTSNLASLLVFLY------------LGHVNIVYGLAAAVGQVVGAYLGSHL 232

Query: 255 SYMIGKKYLTIGF 267
           +   G   + + F
Sbjct: 233 AIAKGSSLVRVVF 245


>gi|50121990|ref|YP_051157.1| hypothetical protein ECA3067 [Pectobacterium atrosepticum SCRI1043]
 gi|49612516|emb|CAG75966.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
          Length = 266

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 91/238 (38%), Gaps = 25/238 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D + ++     L+G +  + G GGGL+ +P L       G+  +      + T+      
Sbjct: 9   DMLVVLFFVGALAGFIDSIAG-GGGLLTIPALL----AAGLSPAQV----LATNKLQAVG 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R   +N+   K  I +  I +   + +I  +   FL +      + +G+ 
Sbjct: 60  GSFSASLYFIRRRAVNLGEQKLAIALTFIGSTFGAWLIQQIHADFLRQLLPFLIIGIGLY 119

Query: 141 MLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L   ++  E   R+        + G   GF  G  G G G F  L  +  YG ++ KAT
Sbjct: 120 FLLTPKIGDEDRQRRLSPLPFAIVAGGCVGFYDGFFGPGAGSFYALAFVTLYGFNLAKAT 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A +  ++    F  LL  + SG  +  +              ++L   IL   L  K+
Sbjct: 180 ANAKILNFTSNFGGLLFFMLSGKVVWVV------------GGVMLIGQILGARLGAKM 225


>gi|16801565|ref|NP_471833.1| hypothetical protein lin2503 [Listeria innocua Clip11262]
 gi|47095881|ref|ZP_00233485.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
 gi|116873767|ref|YP_850548.1| hypothetical protein lwe2351 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|254900461|ref|ZP_05260385.1| hypothetical protein LmonJ_11622 [Listeria monocytogenes J0161]
 gi|254913301|ref|ZP_05263313.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254937682|ref|ZP_05269379.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|255025892|ref|ZP_05297878.1| hypothetical protein LmonocytFSL_05285 [Listeria monocytogenes FSL
           J2-003]
 gi|16415025|emb|CAC97730.1| lin2503 [Listeria innocua Clip11262]
 gi|47015758|gb|EAL06687.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
 gi|116742645|emb|CAK21769.1| putative membrane protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|258610282|gb|EEW22890.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|293591302|gb|EFF99636.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|313622558|gb|EFR92964.1| permease [Listeria innocua FSL J1-023]
          Length = 279

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 86/258 (33%), Gaps = 48/258 (18%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+  F        I +  A+G S+  +  TS  S + + + G  N+++         I
Sbjct: 33  PALTLIF-------GIDIQYAIGASIISVIATSSGSAIAYIKDGITNLRVGMFLEIATTI 85

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR------------------------- 144
             +  + +   +  + L   F +  L     M+K+                         
Sbjct: 86  GAITGAFVSGLLSATALYIIFGLLLLYSAFNMIKKVGSEFPTNVKPDPLATKLNLHDSYY 145

Query: 145 ---DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA 200
               R   + +  +    +      G  SG LG+G G F  + + +F    +  ++ATS 
Sbjct: 146 DKSLRQTVDYQVANVPAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSATSN 205

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  + A  +  V ++ G     +               +    ++   L T++   +  
Sbjct: 206 LMMGVTAAASATVYLFQGDIQPAI------------AAPVAIGVLVGATLGTRIMQRLKS 253

Query: 261 KYLTIGFSMIMFTTSFVF 278
           K + I F  ++   +F  
Sbjct: 254 KVIRIIFIPVILYVAFQM 271



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  SGL G+G G   V         + +   + + V+  TS  ++  T+  S   +   
Sbjct: 170 AGIASGLLGIGSGAFKV-------MALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQ 222

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           G I   I       + +   + + ++  +    +   F    L +   M+ 
Sbjct: 223 GDIQPAIAAPVAIGVLVGATLGTRIMQRLKSKVIRIIFIPVILYVAFQMIL 273


>gi|125625253|ref|YP_001033736.1| hypothetical protein llmg_2497 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124494061|emb|CAL99061.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300072063|gb|ADJ61463.1| hypothetical protein LLNZ_12900 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 283

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 98/280 (35%), Gaps = 50/280 (17%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
            F++G    + G+GGG+++ PV++  F        + +  A+G S+  +  TS  + + +
Sbjct: 14  GFVAGVFGSILGLGGGIIITPVITTFF-------GVDIKYAIGASIVAVIATSSGAAISY 66

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
            +   IN++          I  +V +++    D + LN  F    +  G  M ++     
Sbjct: 67  LKDDMINVRTAMFLEIFTTIGGLVGAILAGFFDATILNILFGCLLIFQGYNMWRKMHKGE 126

Query: 150 ER------------------------------KFPDNYVKYIWGMVTGFLSGALGVGGGI 179
           E                               +           +  G  SG LG+G G+
Sbjct: 127 EVVQNVESDKIAEKLKLNSSYYDKQLGKEIPYQVEKVPGGAAVMLGAGVASGLLGIGSGV 186

Query: 180 FTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
           F  + M       +  +TATS  +  + A  +  V  ++            G+VN     
Sbjct: 187 FKVMAMDSMMKMPLKASTATSNLMIGVTAAASATVYFFN------------GYVNPSLAG 234

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +    +    L +K+   +  K + + F  ++   +   
Sbjct: 235 PLAIGIVAGAALGSKIMPKLPAKTIRLIFIPVILIMALQM 274



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 11/114 (9%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV--AMGTSLGVIAPTSVMSFMEHR 90
           +G  SGL G+G G          F++M +D  + M +  +  TS  +I  T+  S   + 
Sbjct: 173 AGVASGLLGIGSG---------VFKVMAMDSMMKMPLKASTATSNLMIGVTAAASATVYF 223

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +G +N  +       +     + S ++  +    +   F    L+M + ML +
Sbjct: 224 FNGYVNPSLAGPLAIGIVAGAALGSKIMPKLPAKTIRLIFIPVILIMALQMLLK 277


>gi|126699606|ref|YP_001088503.1| hypothetical protein CD1995 [Clostridium difficile 630]
 gi|115251043|emb|CAJ68874.1| putative membrane protein [Clostridium difficile]
          Length = 250

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 101/254 (39%), Gaps = 27/254 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + +  FL+  +  + G GGGL+ +PVL            + +H+A+GT+    +   
Sbjct: 4   VIFLCIGGFLAAFVDSIAG-GGGLISMPVLMAI--------GVPVHLAIGTNKFAASAGC 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   + + G IN  +LK  +    I +V+    +  + +  LN    +  L++ I   
Sbjct: 55  ISSAYRYAKSGKINNNLLKKLVPFTIIGSVLGVRCVLSISEEILNVLVVVMILIVAIYTF 114

Query: 143 KRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
               L  E  F      +  +  +  ++ GF  G  G G G F     +  YG     A+
Sbjct: 115 ISKNLGQEDNFEAVNKKNLRLGMLMALIMGFYDGFFGPGTGTFLTFGFIKIYGYDFLHAS 174

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++      +LL+ + +G             V+    ++   + I+   +  K++ 
Sbjct: 175 ANTKILNLTSNITSLLLFMINGQ------------VDYKIAIVFALVMIMGAYVGAKVAI 222

Query: 257 MIGKKYLTIGFSMI 270
             G K +   F ++
Sbjct: 223 KKGSKMIKPIFLVM 236


>gi|116513159|ref|YP_812066.1| permease [Lactococcus lactis subsp. cremoris SK11]
 gi|116108813|gb|ABJ73953.1| Predicted permease [Lactococcus lactis subsp. cremoris SK11]
          Length = 283

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 98/280 (35%), Gaps = 50/280 (17%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
            F++G    + G+GGG+++ PV++  F        + +  A+G S+  +  TS  + + +
Sbjct: 14  GFVAGVFGSILGLGGGIIITPVITTFF-------GVDIKYAIGASIVAVIATSSGAAISY 66

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
            +   IN++          I  +V +++    D + LN  F    +  G  M ++     
Sbjct: 67  LKDDMINVRTAMFLEIFTTIGGLVGAVLAGFFDATILNILFGCLLIFQGYNMWRKMHKGE 126

Query: 150 ER------------------------------KFPDNYVKYIWGMVTGFLSGALGVGGGI 179
           E                               +           +  G  SG LG+G G+
Sbjct: 127 EVVQNVESDKIAEKLKLNSSYYDKQLGKEIPYQVEKVPGGAAVMLGAGVASGLLGIGSGV 186

Query: 180 FTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
           F  + M       +  +TATS  +  + A  +  V  ++            G+VN     
Sbjct: 187 FKVMAMDSMMKMPLKASTATSNLMIGVTAAASATVYFFN------------GYVNPSLAG 234

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +    +    L +K+   +  K + + F  ++   +   
Sbjct: 235 PLAIGIVAGAALGSKIMPKLPAKTIRLIFIPVILIMALQM 274



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 11/114 (9%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV--AMGTSLGVIAPTSVMSFMEHR 90
           +G  SGL G+G G          F++M +D  + M +  +  TS  +I  T+  S   + 
Sbjct: 173 AGVASGLLGIGSG---------VFKVMAMDSMMKMPLKASTATSNLMIGVTAAASATVYF 223

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +G +N  +       +     + S ++  +    +   F    L+M + ML +
Sbjct: 224 FNGYVNPSLAGPLAIGIVAGAALGSKIMPKLPAKTIRLIFIPVILIMALQMLLK 277


>gi|260592772|ref|ZP_05858230.1| putative membrane protein [Prevotella veroralis F0319]
 gi|260535303|gb|EEX17920.1| putative membrane protein [Prevotella veroralis F0319]
          Length = 278

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/287 (17%), Positives = 108/287 (37%), Gaps = 45/287 (15%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++ +  L+++ ++ +G L  L G+GGG++++P+L+  F        I  H A+G +L  
Sbjct: 2   SIIVFTILLLLGAYCAGLLGSLTGLGGGVIVIPLLTLCF-------GIDFHYAIGAALVA 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
              TS  +   + + G  N+++         I  V+ + +   +  + +   F +  LL 
Sbjct: 55  SIATSSGAASAYVKEGMTNIRLGMFLEIATSIGAVLGAAVALWMPTNAIAIIFGVVLLLT 114

Query: 138 GILMLK-------------------------RDRLYCERKFPDNYVKYIWGMVTGFLSGA 172
             L  +                         +D    + +  +    +   ++ G LSG 
Sbjct: 115 IALQFRQKTDYVDVKGSRLAMKLKLFGSYPTKDGKQQKYELTNVTGGFSVMVLAGALSGL 174

Query: 173 LGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF 231
           LG+G G    L M          +T TS  +  + A  + +V +  G+   G        
Sbjct: 175 LGIGSGALKVLAMDGCMKVPFKVSTTTSNFMIGVTAVTSAVVYLQRGYIEPG-------- 226

Query: 232 VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +    ++ +L  ++       KL   +  + L   F++ +   +   
Sbjct: 227 IAFPIMIGVLAGAMS----GAKLLKRLDVRLLRKIFAVAILLAALNM 269



 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
            L+G LSGL G+G G + V         M     +   V+  TS  +I  T+V S + + 
Sbjct: 166 VLAGALSGLLGIGSGALKV-------LAMDGCMKVPFKVSTTTSNFMIGVTAVTSAVVYL 218

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + G I   I    +  +    +  + ++  +D   L K FA+  LL  + M+  
Sbjct: 219 QRGYIEPGIAFPIMIGVLAGAMSGAKLLKRLDVRLLRKIFAVAILLAALNMIYN 272


>gi|239637967|ref|ZP_04678928.1| transporter [Staphylococcus warneri L37603]
 gi|239596530|gb|EEQ79066.1| transporter [Staphylococcus warneri L37603]
          Length = 258

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 80/204 (39%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +I++  FL+  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   IYVILIIVLFGFLASFIDSVVG-GGGLISTPALLAI--------GLPPAVALGTNKLASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ S ++  R G +++KI+      + I +   + + + +    L     I   L+ I
Sbjct: 56  FGTLTSTIKFIRSGNVDLKIVSKLFPFVLIASSGGAYLATLLPAQLLKPLIIIALSLVFI 115

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGM-----VTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             L +      R F                + GF  G +G G G F   ++L +G     
Sbjct: 116 YTLVKKDWGSVRTFTTFTRMKAIMFVMAYLIIGFYDGFIGGGTGSFMLFVLLMFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A   +  ++      AL++ +  G
Sbjct: 176 AAGNAKVLNFASNIGALILFMILG 199


>gi|158424560|ref|YP_001525852.1| hypothetical protein AZC_2936 [Azorhizobium caulinodans ORS 571]
 gi|158331449|dbj|BAF88934.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 275

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 65/271 (23%), Positives = 113/271 (41%), Gaps = 4/271 (1%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M   S   +++++  ++    L+G L GLFG  GGLV+VPVL      +G+ +S+ +HVA
Sbjct: 1   MASESIPELIEFVLALLALGALAGLLVGLFGAYGGLVIVPVLHPLLTTLGMHNSLVVHVA 60

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
            G SL ++A T +  +   R   +        W++ +    V  S+++S +    +   F
Sbjct: 61  TGISLALVAVTGLRLWRGRRAARSGRGLAPGGWLWAVSAAAVAASVVVSALPSGEMELVF 120

Query: 131 AIFCLLMGILMLKRDRLYC--ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
            I  L   + ML    +      +           +     S      GG F  L   + 
Sbjct: 121 TIAVLAGAVKMLFLGHISAPSGARLVAAGGGGAATLSDDGFSDLESSLGGAFHKLRDAWA 180

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
           GA   +  A    V A++A P L     + +G    P  S  F+ +  V +IL  ++ + 
Sbjct: 181 GAG--RMMADPLAVCAVLAVPGLFGLAAAVFGDPQFPAASADFMQVFGVAVILVTAVGLA 238

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           PL   LS    K+ L +   + +   +  FA
Sbjct: 239 PLGAALSGQFPKRVLEVSLGVFLLMLAGEFA 269


>gi|306844206|ref|ZP_07476799.1| Protein of unknown function DUF81 [Brucella sp. BO1]
 gi|306275481|gb|EFM57218.1| Protein of unknown function DUF81 [Brucella sp. BO1]
          Length = 261

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 98/259 (37%), Gaps = 27/259 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+  A+F++G +  + G GGG++ +P L     L G+        A+GT+       S 
Sbjct: 10  LLLTAAAFIAGIIDSIAG-GGGMITIPALL----LAGVPPVE----ALGTNKLQGLFGSS 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + R G +N+           + +V+ +L+ + +  + +  A  +  + + I    
Sbjct: 61  SATIAYARKGHVNILQQWPEALASLLGSVLGALLATVLPVNIMRAALPMLLIAIAIYFAL 120

Query: 144 RDRLYCERKFPDNYVKYIWGM----VTGFLSGALGVG-GGIFTNLLMLFYGASIYKATAT 198
           +  L    +       +++G+    + GF  G  G G G  F    + F G  + KATA 
Sbjct: 121 KPSLGDIDRA-RRIGPFLFGVTLVPLIGFYDGLFGPGTGSFFMLAFVAFAGYGVLKATAH 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++                        ++G +N    + +     +   +  +L+  I
Sbjct: 180 TKLLNCASNIGGFATFA------------AVGVINWKIGISMGIAQFIGAQIGARLAMKI 227

Query: 259 GKKYLTIGFSMIMFTTSFV 277
           G + +     ++    +  
Sbjct: 228 GSRIIKPLLIVVSLALAVR 246



 Score = 40.4 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 13/124 (10%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
             +      + G +    G GGG+ T   +L  G    +A  T+       +  A +   
Sbjct: 9   TLLLTAAAFIAGIIDSIAG-GGGMITIPALLLAGVPPVEALGTNKLQGLFGSSSATIAYA 67

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                         G VNI         S+L + L   L+ ++    +     M++   +
Sbjct: 68  RK------------GHVNILQQWPEALASLLGSVLGALLATVLPVNIMRAALPMLLIAIA 115

Query: 276 FVFA 279
             FA
Sbjct: 116 IYFA 119


>gi|147919689|ref|YP_686566.1| hypothetical protein RCIX2106 [uncultured methanogenic archaeon
           RC-I]
 gi|110621962|emb|CAJ37240.1| conserved hypothetical protein [uncultured methanogenic archaeon
           RC-I]
          Length = 263

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 101/262 (38%), Gaps = 18/262 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L ++   ++G   GL G+GG +++VPVL+  F        + +H+A+  SL      S
Sbjct: 7   IILFLITGLIAGAFGGLLGLGGAVILVPVLTLGF-------GLPIHLAIPVSLISNIFVS 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S M +RR G ++ + +           ++ +L+ +    + +   F IF L M    +
Sbjct: 60  LTSVMSYRRRGLLHRRTIWIMNVWSVTGIILGTLVAAWSPDTRIKLLFGIFLLFMIAEAV 119

Query: 143 KRDR-----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKAT 196
              R        E +  +       G   G L   LG+GGG     +        +  A 
Sbjct: 120 LVKREIDLGEAQEPEKLNVPAFSALGFCMGLLGALLGIGGGTLAVPVQNSLLKVPLRNAI 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A S     + A    +     G G       +     +     I+P S++   LAT  S 
Sbjct: 180 ANSLATIVVSASVGAVTYFIVGSGTLFSATEA-----LVIAAAIVPGSVIGAKLATMFSD 234

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            +  +Y+   F +++   S+  
Sbjct: 235 RLPVRYIRYIFYLVLLYISYNM 256


>gi|282858893|ref|ZP_06268033.1| putative membrane protein [Prevotella bivia JCVIHMP010]
 gi|282588275|gb|EFB93440.1| putative membrane protein [Prevotella bivia JCVIHMP010]
          Length = 277

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 57/286 (19%), Positives = 108/286 (37%), Gaps = 44/286 (15%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            V+ +  ++I+A+FL+G L  L G+GGG+V++PVL+  F        I  H A+G +L  
Sbjct: 2   TVLTFTLILILAAFLAGLLGSLTGLGGGVVVIPVLTLCF-------GIDFHYAIGAALIA 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
              TS  S   + R G  N+++         I  V  + +   +  + +   F +  ++ 
Sbjct: 55  SIATSSGSASAYVREGITNIRLGMFLEIATTIGAVCGAFIAIWMPTNIIAVIFGVVMIMT 114

Query: 138 GILMLKRD-------------------RLYCERKFPDNYVKYIWGMVT-----GFLSGAL 173
            +L  +R                        +       +  + G  +     G LSG L
Sbjct: 115 AVLQQRRKVDHENVVGSTMAKKLQLYGSYPTKEGMKSYQLTNVAGGFSIMLSAGVLSGLL 174

Query: 174 GVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G G+   L M          +T TS  +  + A  + +V +  G+   G        +
Sbjct: 175 GIGSGVLKVLAMDAAMKVPFKVSTTTSNFMIGVTAVASAVVYLQRGYIDPG--------I 226

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               ++ +L  S+       +L   +    L   FS+ +   +   
Sbjct: 227 AFPIIIGVLAGSMS----GARLLKRMNVSVLRKIFSVAIALVALNM 268



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 7/112 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G LSGL G+G G++ V         M     +   V+  TS  +I  T+V S + + + 
Sbjct: 167 AGVLSGLLGIGSGVLKV-------LAMDAAMKVPFKVSTTTSNFMIGVTAVASAVVYLQR 219

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           G I+  I    I  +   ++  + ++  ++ S L K F++   L+ + M+  
Sbjct: 220 GYIDPGIAFPIIIGVLAGSMSGARLLKRMNVSVLRKIFSVAIALVALNMIYN 271


>gi|313202527|ref|YP_004041184.1| hypothetical protein Palpr_0037 [Paludibacter propionicigenes WB4]
 gi|312441843|gb|ADQ78199.1| protein of unknown function DUF81 [Paludibacter propionicigenes
           WB4]
          Length = 279

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 88/260 (33%), Gaps = 46/260 (17%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +V++P+L+  F        + M  A+GT+L     TS  +   + R G  N +I      
Sbjct: 30  VVIIPLLTLGF-------GVDMRFAVGTALVTSIATSSGAAAAYIREGITNTRIGMFLEI 82

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN--------- 156
                 V  +L+  ++    +   FA   +    + +++     +   P +         
Sbjct: 83  ATTTGAVAGALVAMYLPTHIIALIFAAILIFSAAMTIRKRNTVVDYAAPGDKLGVKLKLN 142

Query: 157 -----------------YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATAT 198
                               Y    V G LSG LG+G G    L M          +T T
Sbjct: 143 GSYPSEKGTINYNVHNVLGGYSLMTVAGVLSGLLGIGSGALKVLAMDTMMKIPFKVSTTT 202

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  +  + A  + ++ +  G+   GL             + I+P  ++     +K+    
Sbjct: 203 SNFMVGVTAAASAVIYLQRGYIDPGL------------AMPIVPGVLIGAFFGSKILVKA 250

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
             + L   FS+++   +   
Sbjct: 251 KVQTLRKVFSVVITMLALQM 270



 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G LSGL G+G G + V         M     I   V+  TS  ++  T+  S + + +
Sbjct: 168 VAGVLSGLLGIGSGALKV-------LAMDTMMKIPFKVSTTTSNFMVGVTAAASAVIYLQ 220

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G I+  +    +  + I     S ++       L K F++   ++ + M+  
Sbjct: 221 RGYIDPGLAMPIVPGVLIGAFFGSKILVKAKVQTLRKVFSVVITMLALQMIYN 273


>gi|261885597|ref|ZP_06009636.1| hypothetical protein CfetvA_10889 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 223

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 53/154 (34%), Gaps = 1/154 (0%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +  A+G S+  +  +S+     + + G                   ++  ++ +    +L
Sbjct: 40  IKYAIGISVMQMIFSSLFGSYINYKKGMFKFGEGFYVGIGGIFGAFLSGFIVKYTPSLWL 99

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LM 185
              FA    +M I    +     E K     +  I G+  G +  ++G+GGG+  +L   
Sbjct: 100 ECMFASLLFIMIIKAFIKKSFASEEKKLSKPILIIIGIFVGIMGVSVGIGGGMLISLIFF 159

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            F G  I KA +              +    +G 
Sbjct: 160 GFLGYDIKKAVSMGLFFVVFAGVSGFISLSINGL 193


>gi|289435669|ref|YP_003465541.1| hypothetical protein lse_2308 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171913|emb|CBH28459.1| membrane protein, putative [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|313632109|gb|EFR99200.1| permease [Listeria seeligeri FSL N1-067]
 gi|313636494|gb|EFS02235.1| permease [Listeria seeligeri FSL S4-171]
          Length = 279

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 86/258 (33%), Gaps = 48/258 (18%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+  F        I +  A+G S+  +  TS  S + + + G  N+++         +
Sbjct: 33  PALTLIF-------GIDIQYAIGASIISVIATSSGSAVAYIKDGITNLRVGMFLEIATTV 85

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR------------------------- 144
             +  + +   +  + L   F +  L     M+K+                         
Sbjct: 86  GAITGAFVSGLLSATALYIIFGLLLLYSAFNMIKKVGSEFPTNVKPDPIATKLNLHDSYY 145

Query: 145 ---DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA 200
               R   + +  +    +      G  SG LG+G G F  + + +F    +  ++ATS 
Sbjct: 146 DKSLRQTVDYQVANVPAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSATSN 205

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  + A  +  V ++ G     +               +    ++   L T++   +  
Sbjct: 206 LMMGVTAAASATVYLFQGDIQPAI------------AAPVAIGVLIGATLGTRVMQRLKS 253

Query: 261 KYLTIGFSMIMFTTSFVF 278
           K + I F  ++   +F  
Sbjct: 254 KVIRIIFIPVILYVAFQM 271



 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  SGL G+G G   V         + +   + + V+  TS  ++  T+  S   +   
Sbjct: 170 AGIASGLLGIGSGAFKV-------MALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQ 222

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           G I   I       + I   + + ++  +    +   F    L +   M+ 
Sbjct: 223 GDIQPAIAAPVAIGVLIGATLGTRVMQRLKSKVIRIIFIPVILYVAFQMIL 273


>gi|329767163|ref|ZP_08258691.1| hypothetical protein HMPREF0428_00388 [Gemella haemolysans M341]
 gi|328837888|gb|EGF87513.1| hypothetical protein HMPREF0428_00388 [Gemella haemolysans M341]
          Length = 282

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 88/263 (33%), Gaps = 53/263 (20%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++ P L+  F        I +  A+G S+  +  TS  S +   +    NM++      
Sbjct: 27  IIITPALTILF-------GIDIKYAIGASIVAVIATSSGSAIAFVKDHISNMRVGMFLEV 79

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR----------------DRLYC 149
                 VV +LM        L   F++  L     MLK+                D+   
Sbjct: 80  FTTAGGVVGALMAGIFSSKLLYIFFSLILLNSFYGMLKKTGLITKLKKEEEKVVNDKYAD 139

Query: 150 ERKFPDNYVKYIWGMVT-----------------GFLSGALGVGGGIFTNLLM-LFYGAS 191
             K    Y     G                    GF SG LG+G G F  + +  +    
Sbjct: 140 RYKLNSTYYDKATGKTIAYNVTNVPQGSLVMFGAGFASGLLGIGSGAFKVVALDSYMKLP 199

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           I  +TATS  +  + A  + L+  ++G             +N      I   +++ +   
Sbjct: 200 IRVSTATSNFMMGVTATASALIYFFNGT------------INPAIAAPIAIGTLIGSRTG 247

Query: 252 TKLSYMIGKKYLTIGFSMIMFTT 274
            K+   +  KY+   F  I+  T
Sbjct: 248 AKVMQRLDAKYIRYIFLPILLFT 270



 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G  SGL G+G G   V  L    +L        + V+  TS  ++  T+  S + + 
Sbjct: 171 FGAGFASGLLGIGSGAFKVVALDSYMKL-------PIRVSTATSNFMMGVTATASALIYF 223

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +GTIN  I         I +   + ++  +D  ++   F    L   + M  +
Sbjct: 224 FNGTINPAIAAPIAIGTLIGSRTGAKVMQRLDAKYIRYIFLPILLFTIVNMFLK 277


>gi|262404199|ref|ZP_06080754.1| hypothetical protein VOA_002189 [Vibrio sp. RC586]
 gi|262349231|gb|EEY98369.1| hypothetical protein VOA_002189 [Vibrio sp. RC586]
          Length = 259

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 92/264 (34%), Gaps = 28/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+       S
Sbjct: 9   IMVLALVAFIAGFIDAVAG-GGGMLTVPALLSL--------GLPPHLALGTNKLAATFAS 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R    +            +  V+ +L +  +    L KA  +  L   +  +
Sbjct: 60  STAAWTYYREKLFDPACWNRAFIATFVGAVLGTLAVDAISTERLGKALPLIILAAALYTV 119

Query: 143 KRDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
               +  ++             + + G+  GF  G  G G G F T   M  Y  +I  A
Sbjct: 120 WYKPIQNQQNASPKPCPKLHRKQILQGVGLGFYDGLAGPGTGAFWTVSSMALYRFNILLA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++      +L+                LG ++    L +    +    +    +
Sbjct: 180 SGLAKAMNLTSNLTSLVTFAI------------LGHIDWLLGLTMGVCLMAGAFVGAHSA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G  ++   F +++   +   A
Sbjct: 228 IRFGAPFIRPLFILVVTLLATKLA 251


>gi|52550071|gb|AAU83920.1| permease [uncultured archaeon GZfos34H9]
          Length = 252

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 92/250 (36%), Gaps = 24/250 (9%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
              +G +SG+FG+GGG V +P+L+ A         + +  A G +L ++  +S++  +  
Sbjct: 19  GLFAGFMSGMFGIGGGAVRIPLLNLA--------GLPLLSAFGINLFIVPFSSLVGAVS- 69

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY- 148
            +   I+ +I            ++ + +   +    L   F    +++   +     +  
Sbjct: 70  -QRANIDKEIALYLAVGGVFGALIGAFLAGLIPTFILAVIFFALSIIIVFGIFLDRIVPA 128

Query: 149 -CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
              R    +   +    +   ++   G   G      +   G  I+KA ATS  V+    
Sbjct: 129 LAHRINFTHRDVFASSFLLSLIAAIRGGSAGSLFPAFLKAIGCDIHKAIATSLCVTIFTC 188

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
             A  V             WS G +     +  L  S++   L + +S      +L IG 
Sbjct: 189 IGAAAVF------------WSRGDIIWWPAIFALIGSMIGARLGSAVSLKTKSIWLEIGL 236

Query: 268 SMIMFTTSFV 277
            M++   + +
Sbjct: 237 GMLVVALALI 246


>gi|255099908|ref|ZP_05328885.1| hypothetical protein CdifQCD-6_03830 [Clostridium difficile
           QCD-63q42]
          Length = 128

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 55/116 (47%), Gaps = 7/116 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +    +G ++G+FG GGG ++VP+L+   +       +  H +  T+L +I   +  S +
Sbjct: 20  IIGVFTGFINGVFGSGGGTLLVPILNDIVK-------VEEHKSHATALSIIIFLTTASSV 72

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   GT ++ +         +  ++ + +++ V   FL  +F I  ++  + M+ 
Sbjct: 73  LYVSKGTYDVNLTIKVAVGSILGGIIGAKLLNKVTGKFLRISFGIIMIIAALRMVF 128



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 13/124 (10%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVR 214
           N    I G+ TGF++G  G GGG     ++        +K+ AT+  +   +   + ++ 
Sbjct: 15  NLKNTIIGVFTGFINGVFGSGGGTLLVPILNDIVKVEEHKSHATALSIIIFLTTASSVLY 74

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +  G     L             + +   SIL   +  KL   +  K+L I F +IM   
Sbjct: 75  VSKGTYDVNL------------TIKVAVGSILGGIIGAKLLNKVTGKFLRISFGIIMIIA 122

Query: 275 SFVF 278
           +   
Sbjct: 123 ALRM 126


>gi|222148591|ref|YP_002549548.1| permease [Agrobacterium vitis S4]
 gi|221735577|gb|ACM36540.1| permease [Agrobacterium vitis S4]
          Length = 256

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 52/271 (19%), Positives = 100/271 (36%), Gaps = 38/271 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + ++ F+ G L G+ GVGG  +M P++   F        +    A+GT L   A T +  
Sbjct: 1   MSLSGFVVGCLVGITGVGGASLMTPLMVLLF-------GVHPATAVGTDLLYAAVTKMAG 53

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAIFCLLMGI 139
              H RHG I  +++          T +T  ++S V          L  +  I  ++  +
Sbjct: 54  AAVHHRHGHIRWRLVGLLALGSVPATGLTLWLMSGVDRKSAHSVDLLTTSLGIMLMMTAM 113

Query: 140 LMLKRD-------RLYCERKFPDN----YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           ++L RD             + P         ++ G+V G +     VG G     ++LF 
Sbjct: 114 ILLFRDLLVRYEMNWLKSHRSPSPRTIAIGTFVLGLVLGAVVTLTSVGAGAIGVTVLLFL 173

Query: 189 --GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
              ++I     +    +  +     +              W +G VN   +  +L  SI 
Sbjct: 174 YPRSTINDIVGSDIAHAIPLTLIGGIGY------------WVIGDVNWVLLGSLLIGSIP 221

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              L +  +  + +K + I  ++I+   +  
Sbjct: 222 GIVLGSYAAPRLPEKAVRIILALILVIVAAK 252



 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 44/116 (37%), Gaps = 6/116 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V   + G +  L  VG G + V VL   +    I+D +   +A         P +++  
Sbjct: 145 FVLGLVLGAVVTLTSVGAGAIGVTVLLFLYPRSTINDIVGSDIAHA------IPLTLIGG 198

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +   G +N  +L   +       V+ S     + +  +    A+  +++   ++
Sbjct: 199 IGYWVIGDVNWVLLGSLLIGSIPGIVLGSYAAPRLPEKAVRIILALILVIVAAKLI 254


>gi|153853856|ref|ZP_01995212.1| hypothetical protein DORLON_01203 [Dorea longicatena DSM 13814]
 gi|149753606|gb|EDM63537.1| hypothetical protein DORLON_01203 [Dorea longicatena DSM 13814]
          Length = 258

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 95/254 (37%), Gaps = 25/254 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +   A   +G  +G  G+    V+ P+L      +G+D     ++A+G +L    
Sbjct: 4   ILMIIVTFFAGMGAGLGTGFAGMSAAAVISPILI---TFLGMDP----YMAVGIALSSDV 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S +S   + ++  +++K     +  +   TVV S + S V  + +         L+GI
Sbjct: 57  LASAVSAYTYGKNKNLDVKNGLIMMVSVLTFTVVGSYVSSLVPSTTMGNFSVFMTFLLGI 116

Query: 140 LMLKRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASI 192
             + +  +  +                I G++ GF+ G +G GGG+   L++       +
Sbjct: 117 KFIVKPVMTTKEAMEKVSPKKRAVQSLICGVMIGFICGFIGAGGGMMMLLILTSVLDYEL 176

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A  TS  +    AF   +     G           G  NI   ++ +  ++L   +A 
Sbjct: 177 KTAVGTSVFIMTFTAFTGAVSHFAIG-----------GMPNIAVWILCIVFTLLWARIAA 225

Query: 253 KLSYMIGKKYLTIG 266
             +     K L   
Sbjct: 226 VFANKATPKTLNRA 239


>gi|126698373|ref|YP_001087270.1| hypothetical protein CD0793 [Clostridium difficile 630]
 gi|254974415|ref|ZP_05270887.1| hypothetical protein CdifQC_03833 [Clostridium difficile QCD-66c26]
 gi|255091806|ref|ZP_05321284.1| hypothetical protein CdifC_03975 [Clostridium difficile CIP 107932]
 gi|255305797|ref|ZP_05349969.1| hypothetical protein CdifA_04340 [Clostridium difficile ATCC 43255]
 gi|255313541|ref|ZP_05355124.1| hypothetical protein CdifQCD-7_04298 [Clostridium difficile
           QCD-76w55]
 gi|255516226|ref|ZP_05383902.1| hypothetical protein CdifQCD-_03877 [Clostridium difficile
           QCD-97b34]
 gi|255649323|ref|ZP_05396225.1| hypothetical protein CdifQCD_03932 [Clostridium difficile
           QCD-37x79]
 gi|260682493|ref|YP_003213778.1| hypothetical protein CD196_0743 [Clostridium difficile CD196]
 gi|260686092|ref|YP_003217225.1| hypothetical protein CDR20291_0724 [Clostridium difficile R20291]
 gi|306519418|ref|ZP_07405765.1| hypothetical protein CdifQ_04335 [Clostridium difficile QCD-32g58]
 gi|115249810|emb|CAJ67627.1| putative membrane protein, DUF81 family [Clostridium difficile]
 gi|260208656|emb|CBA61418.1| putative membrane protein [Clostridium difficile CD196]
 gi|260212108|emb|CBE02725.1| putative membrane protein [Clostridium difficile R20291]
          Length = 128

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 55/116 (47%), Gaps = 7/116 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +    +G ++G+FG GGG ++VP+L+   +       +  H +  T+L +I   +  S +
Sbjct: 20  IIGVFTGFINGVFGSGGGTLLVPILNDIVK-------VEEHKSHATALSIIIFLTTASSV 72

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   GT ++ +         +  ++ + +++ V   FL  +F I  ++  + M+ 
Sbjct: 73  LYVSKGTYDVNLTIKVAVGSILGGIIGAKLLNKVTGKFLRISFGIIMIIAALRMVF 128



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 13/124 (10%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVR 214
           N    I G+ TGF++G  G GGG     ++        +K+ AT+  +   +   + ++ 
Sbjct: 15  NLKNTIIGVFTGFINGVFGSGGGTLLVPILNDIVKVEEHKSHATALSIIIFLTTASSVLY 74

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +  G     L             + +   SIL   +  KL   +  K+L I F +IM   
Sbjct: 75  VSKGTYDVNL------------TIKVAVGSILGGIIGAKLLNKVTGKFLRISFGIIMIIA 122

Query: 275 SFVF 278
           +   
Sbjct: 123 ALRM 126


>gi|16124627|ref|NP_419191.1| hypothetical protein CC_0372 [Caulobacter crescentus CB15]
 gi|221233315|ref|YP_002515751.1| hypothetical protein CCNA_00376 [Caulobacter crescentus NA1000]
 gi|13421527|gb|AAK22359.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|220962487|gb|ACL93843.1| hypothetical membrane spanning protein [Caulobacter crescentus
           NA1000]
          Length = 268

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 92/255 (36%), Gaps = 25/255 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D +  + V + L+G L  + G GGGL+ +P L  A         +    A+GT+    A
Sbjct: 13  LDILASLFVVAALAGALDAIAG-GGGLITLPALLLA--------GLSPVQALGTNKLQGA 63

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +++ S     R G I+ K          +  +  +L  S +   FL     +  + + +
Sbjct: 64  ISALSSTSAFARRGLIDWKTALPVAGASALAGLGGALCASLLSPEFLRAVVPLMLIAIAL 123

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMV---TGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
                  +  E   P   +      V    GF  G  G G G F    ++   G    KA
Sbjct: 124 YFGLSRAIKAEDVTPRMALIPFACFVAPLIGFYDGIFGPGAGAFYMVAIVTLLGYGALKA 183

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           TA +   +A     +L++                G V     L++   + +   + ++L+
Sbjct: 184 TAHTKLANAASNLGSLVLFTLK------------GAVVWPVGLVMAAGAFIGAQVGSRLA 231

Query: 256 YMIGKKYLTIGFSMI 270
              G K +     +I
Sbjct: 232 MRFGPKLIRPLLVVI 246


>gi|311108548|ref|YP_003981401.1| hypothetical protein AXYL_05386 [Achromobacter xylosoxidans A8]
 gi|310763237|gb|ADP18686.1| hypothetical protein AXYL_05386 [Achromobacter xylosoxidans A8]
          Length = 285

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 93/279 (33%), Gaps = 48/279 (17%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             +  +  A+F +  L G+ G+  G+ +VP+L+  F        + +HVA+G S+  +  
Sbjct: 4   STLFWLFAAAFGASALGGVLGMASGIFIVPILTLLF-------GVDIHVAIGASIISVIA 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S     +    N+++         +  +    +I  V   FL   FA    +    
Sbjct: 57  CSCGSAAPFLKGRLTNVRLAIVLETATTLGALTGVFLIGIVSTEFLYGLFAAILAVSAQQ 116

Query: 141 MLKRDR---------------LYCERKFPDN-------------YVKYIWGMVTGFLSGA 172
           ML R R               L     FPD               +        G +S  
Sbjct: 117 MLARRREAVAIAPDAASWATALRLHSSFPDRAQGREVHYQVDRVPLGLSLMYGAGLISAL 176

Query: 173 LGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF 231
           LG+G G+     M       I  ++ATS  +  + A  +                   G 
Sbjct: 177 LGIGSGVLKIPAMDAALKLPIKVSSATSNFMIGVTAAASAGAYFVR------------GD 224

Query: 232 VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           ++IG    +   S+    L  ++   +    L I F ++
Sbjct: 225 IDIGIAGPVALGSVAGALLGARMLMGLPADKLRIFFVVV 263



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           VD + L +   + +G +S L G+G G++ +P +  A +L        + V+  TS  +I 
Sbjct: 157 VDRVPLGLSLMYGAGLISALLGIGSGVLKIPAMDAALKL-------PIKVSSATSNFMIG 209

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            T+  S   +   G I++ I            ++ + M+  +    L   F + 
Sbjct: 210 VTAAASAGAYFVRGDIDIGIAGPVALGSVAGALLGARMLMGLPADKLRIFFVVV 263


>gi|153952056|ref|YP_001398608.1| hypothetical protein JJD26997_1616 [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939502|gb|ABS44243.1| putative membrane protein [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 261

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 71/185 (38%), Gaps = 13/185 (7%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           LFG+GGG+++VP +               H A+G S+  +   +V     + +   +N+K
Sbjct: 21  LFGIGGGMIIVPSMFAL--------GASAHHAIGISVLQMIFAAVFGSYINYKKKNLNLK 72

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD--- 155
                 F   I    + +++  +    L   F     +  I      +    +       
Sbjct: 73  DGIMIGFGGLIGASFSGMLLKALSDVALTSVFLAVSCIFFIKYAFGIKENIVQNQRSVWV 132

Query: 156 -NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
            N + +I G  TG  + +LG+GGG+    ++ ++ G    K  + S       +   ++ 
Sbjct: 133 KNVILFIAGAFTGIFAISLGIGGGLLIAPILAYFLGYDSKKVVSLSLFFVIFASISGIIS 192

Query: 214 RIYSG 218
            + SG
Sbjct: 193 FLNSG 197


>gi|16263729|ref|NP_436522.1| hypothetical protein SMa2359 [Sinorhizobium meliloti 1021]
 gi|307300834|ref|ZP_07580609.1| protein of unknown function DUF81 [Sinorhizobium meliloti BL225C]
 gi|14524449|gb|AAK65934.1| conserved hypothetical protein [Sinorhizobium meliloti 1021]
 gi|306904368|gb|EFN34953.1| protein of unknown function DUF81 [Sinorhizobium meliloti BL225C]
          Length = 258

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 83/256 (32%), Gaps = 9/256 (3%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++   L  +  FL+  + G  G+  G++     S      G+  +     A  +      
Sbjct: 1   MEDFILFALVGFLAQVIDGALGMAYGVIC----STVLLAFGVPPAQ----ASASVHAAEL 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H  H  I+ K+    I       ++ + +++  D   +      +  ++G 
Sbjct: 53  FTTAASGSAHLYHRNIDWKLFWRLIPFGIAGGMLGAFVVTSFDGDQVKPFVTAYLAVIGA 112

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            +L R             +    G   GFL  A G G G      +L  G        T 
Sbjct: 113 WLLYRSFHRIPTNPVKLRIVAPLGATAGFLDAAGGGGWGPVATTGLLGAGGQPRFVIGTV 172

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                LIA    L  + +    +          ++ ++  ++   ++  P A  +   + 
Sbjct: 173 NASEFLIALSVSLSFLATVLTGHWEQAGDFR-DHLTSIGGLITGGVVAAPFAGWVVKALK 231

Query: 260 KKYLTIGFSMIMFTTS 275
           +K L      ++   +
Sbjct: 232 EKTLLRLVGSLITLLA 247


>gi|83310068|ref|YP_420332.1| trypsin-like serine protease [Magnetospirillum magneticum AMB-1]
 gi|82944909|dbj|BAE49773.1| Trypsin-like serine protease [Magnetospirillum magneticum AMB-1]
          Length = 637

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 73/235 (31%), Gaps = 48/235 (20%)

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + +   +    +K  I       ++   + + +  S +     +F L+M    + 
Sbjct: 407 AASLRNDKAQLVQWDKVKPLIPWGIAGVILGYFIGNAIGDSVVGILLGLFALIMAGKAVM 466

Query: 144 -----------------------------------RDRLYCERKFPDNYVKYIWGMVTGF 168
                                              R +         +    + G+  G 
Sbjct: 467 EILQPNAGEETAESISATEAEDEMDELMALADGTSRPKASGLALPEGHARSAVLGLPMGL 526

Query: 169 LSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            SG LG+ GG+    L  + G  S+  A A S+ +    +    +V    G         
Sbjct: 527 FSGILGISGGVIEVPLQRYVGRISLQNAIANSSVLVFWASVAGSVVAFLHGS-------- 578

Query: 228 SLGFVNIGA----VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           S G ++  A     L+++P + +   +  +L  ++  + L   ++  M   +   
Sbjct: 579 STGLIHWEAPVTLALVMIPGAYVGGIIGARLMRVLPVRVLKGVYAATMAAIALKM 633



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 15/124 (12%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V     G  SG+ G+ GG++ VP+             I +  A+  S  ++   SV   
Sbjct: 518 AVLGLPMGLFSGILGISGGVIEVPLQRYV-------GRISLQNAIANSSVLVFWASVAGS 570

Query: 87  MEHRRHGT----INMK----ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           +    HG+    I+ +    +    I    +  ++ + ++  +    L   +A     + 
Sbjct: 571 VVAFLHGSSTGLIHWEAPVTLALVMIPGAYVGGIIGARLMRVLPVRVLKGVYAATMAAIA 630

Query: 139 ILML 142
           + ML
Sbjct: 631 LKML 634


>gi|120435621|ref|YP_861307.1| membrane protein [Gramella forsetii KT0803]
 gi|117577771|emb|CAL66240.1| membrane protein [Gramella forsetii KT0803]
          Length = 271

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 97/249 (38%), Gaps = 38/249 (15%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VPVL+  F       S+   VA   SL ++  ++++  ++    G ++ K    +   
Sbjct: 29  LAVPVLAYLF-------SMGERVATAYSLFIVGASALVGGIKQHYKGYVDWKTAIIFGIP 81

Query: 107 LPIT-TVVTSLMISHVDKSFLNK-------------AFAIFCLLMGILMLKRDRLYCERK 152
             I  T+V   ++  + +S                  FA+  +     ML++     E+K
Sbjct: 82  AVIGVTIVRHYVVPALPESLFYIQDFEFTRRMAMFGLFAVLMIPAAFSMLRKKDSGKEKK 141

Query: 153 FPDN-----YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALI 206
             +       +    G++ G ++G +G GGG      L++     +  A  TS     +I
Sbjct: 142 SSNERKYNYPLILAEGLIVGGITGMIGAGGGFLIIPALVILANIEMKTAVGTSL---III 198

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           AF +LL   + G  +     W+        + II  +S L   + + LS  I  + L  G
Sbjct: 199 AFKSLLGF-FLGDAITMEIDWTF-------LGIITGLSFLGIFIGSYLSNYINGERLKKG 250

Query: 267 FSMIMFTTS 275
           F   +F  +
Sbjct: 251 FGYFIFLMA 259



 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 8/120 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI+    + G ++G+ G GGG +++P L           +I M  A+GTSL +IA  S++
Sbjct: 152 LILAEGLIVGGITGMIGAGGGFLIIPALVIL-------ANIEMKTAVGTSLIIIAFKSLL 204

Query: 85  SFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            F         I+   L     +  +   + S + ++++   L K F  F  LM   +  
Sbjct: 205 GFFLGDAITMEIDWTFLGIITGLSFLGIFIGSYLSNYINGERLKKGFGYFIFLMAGFIFY 264


>gi|116491798|ref|YP_811342.1| permease [Oenococcus oeni PSU-1]
 gi|290891448|ref|ZP_06554507.1| hypothetical protein AWRIB429_1897 [Oenococcus oeni AWRIB429]
 gi|116092523|gb|ABJ57677.1| Predicted permease [Oenococcus oeni PSU-1]
 gi|290478890|gb|EFD87555.1| hypothetical protein AWRIB429_1897 [Oenococcus oeni AWRIB429]
          Length = 283

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 95/278 (34%), Gaps = 50/278 (17%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + + I    L+G    + G+GGG+++ P+L   F       ++ +H A+  S+  +  
Sbjct: 4   TLLIVYISIGILAGVFGAVLGLGGGMIVTPILVLGF-------NLPIHYAIAASIIAVIG 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS  + + + +   +N+++         I  ++ ++++     S+LN  F    L  G  
Sbjct: 57  TSSGASVAYLKDDLLNIRVAMFLEIFTTIGALIGAVLVGIFKASWLNAFFGFLLLYQGFA 116

Query: 141 MLKRDRLYCERKF------------------------------PDNYVKYIWGMVTGFLS 170
           M ++                                              +     GF S
Sbjct: 117 MWQKMHSKKADTLALKDDTAARKLNLDSSYYDKLQGKEVTYHIQKVPFGALIMFGAGFAS 176

Query: 171 GALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G LG+G G F    M       +  ++ATS  +  + A  + L+  ++G           
Sbjct: 177 GLLGIGSGTFKVFAMDTVMQMPLKPSSATSNFMMGVTAAASALIYFFNGTIQP------- 229

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
                  V  I    I  + L +K+   +  K L   F
Sbjct: 230 -----LIVAPIAIGIIFGSTLGSKVMPYLPNKLLRGIF 262



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 7/125 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +    +  F +G  SGL G+G G   V  +    Q       + +  +  TS  ++ 
Sbjct: 159 IQKVPFGALIMFGAGFASGLLGIGSGTFKVFAMDTVMQ-------MPLKPSSATSNFMMG 211

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S + +  +GTI   I+      +   + + S ++ ++    L   F    +L G+
Sbjct: 212 VTAAASALIYFFNGTIQPLIVAPIAIGIIFGSTLGSKVMPYLPNKLLRGIFIPVVVLAGV 271

Query: 140 LMLKR 144
            ++ +
Sbjct: 272 QLVIK 276


>gi|146299259|ref|YP_001193850.1| hypothetical protein Fjoh_1499 [Flavobacterium johnsoniae UW101]
 gi|146153677|gb|ABQ04531.1| protein of unknown function DUF81 [Flavobacterium johnsoniae UW101]
          Length = 260

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 99/277 (35%), Gaps = 39/277 (14%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D+   +++A    G + GL GVGGG +M P+L           +I    A+GT L   A
Sbjct: 1   MDFQIGLVIAGLAVGFIVGLTGVGGGSLMTPILLYF--------NIPPTTAVGTDLLYAA 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIF 133
            T       H + G IN KI            +VT  +++ +          +  +    
Sbjct: 53  FTKAGGVFVHNKKGNINWKITGWLTLGSVPAALVTLWILNSIKTDIETINRVIKYSLGWA 112

Query: 134 CLLMGILMLKRDRL-----------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-- 180
            L   + ++ ++++           +       N +    G++ G       +G G    
Sbjct: 113 LLFTSVAIIFKNKILKYSQKHAGDKFHSESTTQNMLTIAIGVLLGATVTLTSIGAGALGT 172

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             L  L+      +   T    +  +              + GL   S+G +++  +  +
Sbjct: 173 VTLFFLYPLLPTPRLVGTEIAHAVPLTL------------VAGLGHASMGNLDLALLGQL 220

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L  S+    + + LS  +  ++L    ++++F   + 
Sbjct: 221 LMGSLPGIYMGSMLSGKVPDQFLRNAIALMLFMAGYK 257


>gi|319783106|ref|YP_004142582.1| hypothetical protein Mesci_3409 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317168994|gb|ADV12532.1| protein of unknown function DUF81 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 261

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 88/266 (33%), Gaps = 25/266 (9%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            D  +  + ++  A+F +G +  + G GGGL+ VP L  A              A+ T+ 
Sbjct: 2   IDLSIQTVAMLAFAAFAAGFVDSIAG-GGGLITVPALLLA--------GFTPVQALATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 S  + + +   G ++++       +  + + + +L+ + V    L  A  I  +
Sbjct: 53  LQGMFGSGSATIHYASKGHVDLRRQLPSALLALVGSAIGALLATIVPGDILRAALPIVLI 112

Query: 136 LMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGAS 191
            + +    +  +       +              GF  G  G G G F     +   G  
Sbjct: 113 AIALYFAFKPNMNDVDRAERLSPFLFGLTLVPAIGFYDGLFGPGAGSFYMLAFVALAGYG 172

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           + KATA +  ++        +V    G             V     L++     L   + 
Sbjct: 173 VLKATAHTKLLNFASNIGGFIVFAAFGV------------VYWKIGLMMGVAQFLGARVG 220

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
             L+  IG + +     ++    +  
Sbjct: 221 ASLAMRIGARLIKPLLVIVCLALAVK 246


>gi|312886334|ref|ZP_07745945.1| protein of unknown function DUF81 [Mucilaginibacter paludis DSM
           18603]
 gi|311301178|gb|EFQ78236.1| protein of unknown function DUF81 [Mucilaginibacter paludis DSM
           18603]
          Length = 277

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 98/275 (35%), Gaps = 44/275 (16%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++ +  L++  ++L+G +  L G+GGG+V++P+L+  F        + +  A+G +L  
Sbjct: 2   TIITFTLLLLAGAYLAGLVGSLTGLGGGVVIIPLLTLVFH-------VDIRYAIGAALLA 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
               S  +   + + G  N+++         +  VV +L+  +   + +   F    L  
Sbjct: 55  SIANSSGAASAYVKEGITNIRLGMFLEIATTVGAVVGALIAVYTPTNTIAILFGSILLFS 114

Query: 138 GILMLKRDRLYC------------------------ERKFPDNYVKYIWGMVTGFLSGAL 173
             + L++                                  +    +    + G  SG L
Sbjct: 115 AAMTLRKKNQEALLVGSPAANKLKLNSTYPTKDGEVSYHLKNVGAGFSIMTLAGVFSGLL 174

Query: 174 GVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G G    L M          +T TS  +  + A  + +V +  G+   G        +
Sbjct: 175 GIGSGALKVLAMDSTMHIPFKVSTTTSNFMIGVTAAASAVVYLQRGYMDAG--------I 226

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
               VL +L  +       +KL   I  + L   F
Sbjct: 227 AFPVVLGVLGGAFT----GSKLLPRIDARILKYIF 257



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+G  SGL G+G G + V         M     I   V+  TS  +I  T+  S + + +
Sbjct: 166 LAGVFSGLLGIGSGALKV-------LAMDSTMHIPFKVSTTTSNFMIGVTAAASAVVYLQ 218

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G ++  I    +  +       S ++  +D   L   F      + + M+  
Sbjct: 219 RGYMDAGIAFPVVLGVLGGAFTGSKLLPRIDARILKYIFCTAIAFVAVEMIYN 271


>gi|153009210|ref|YP_001370425.1| hypothetical protein Oant_1880 [Ochrobactrum anthropi ATCC 49188]
 gi|151561098|gb|ABS14596.1| protein of unknown function DUF81 [Ochrobactrum anthropi ATCC
           49188]
          Length = 272

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 91/252 (36%), Gaps = 27/252 (10%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F++G +  + G GGG++ +P L     L GI        A+GT+       S  + + + 
Sbjct: 28  FIAGIIDSIAG-GGGMITIPALL----LAGIPPVE----ALGTNKLQGLFGSSSATIAYA 78

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           R G +N+K          I +V  +L+ + +    +  A  I  + + +    +  L   
Sbjct: 79  RKGHVNIKEQWPEALASLIGSVFGALLATVLPVDIMRAALPILLIAIAVYFAIKPSLGDV 138

Query: 151 RKFPDNYVKYIWGM----VTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSAL 205
            +       +++G+    + GF  G  G G G  F    +   G  + KATA +  ++  
Sbjct: 139 DRA-RRIGPFLFGVTLVPLIGFYDGLFGPGTGSFFMLAFVALAGFGVLKATAHTKLLNCA 197

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
                                 ++G +N    + +     +   +   L+  +G + +  
Sbjct: 198 SNVGGFATFA------------AVGVINWKIGICMGVAQFIGAQIGASLAMKVGSRIIKP 245

Query: 266 GFSMIMFTTSFV 277
              ++    +  
Sbjct: 246 LLIVVSLALAVR 257



 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 13/116 (11%)

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            + G +    G GGG+ T   +L  G    +A  T+       +  A +           
Sbjct: 28  FIAGIIDSIAG-GGGMITIPALLLAGIPPVEALGTNKLQGLFGSSSATIAYARK------ 80

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                 G VNI         S++ +     L+ ++    +     +++   +  FA
Sbjct: 81  ------GHVNIKEQWPEALASLIGSVFGALLATVLPVDIMRAALPILLIAIAVYFA 130


>gi|295687791|ref|YP_003591484.1| hypothetical protein Cseg_0348 [Caulobacter segnis ATCC 21756]
 gi|295429694|gb|ADG08866.1| protein of unknown function DUF81 [Caulobacter segnis ATCC 21756]
          Length = 259

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 90/255 (35%), Gaps = 25/255 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D I  + V + L+G L  + G GGGLV +P L  A         +    A+GT+    A
Sbjct: 4   IDVIATLFVVATLAGALDAIAG-GGGLVTLPALLLA--------GLSPVQALGTNKLQGA 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +++ S     R G I+ K          +  +  +L  S +    L     +  + + +
Sbjct: 55  VSAISSTSAFARRGLIDWKTAWPVAAAAAVAGLCGALCASLLSPQVLRAIVPVLLIAIAL 114

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMV---TGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
                  L  E   P   +      V    GF  G  G G G F    ++   G  + KA
Sbjct: 115 YFGFSRALKSEDVTPRMALVPFACFVTPLVGFYDGIFGPGAGAFYMVAIVTLLGYGVLKA 174

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           TA +   +A     +L +    G             V     L +   + +   + ++L+
Sbjct: 175 TAHTKLANAASNLGSLTLFALKGV------------VVWPVGLAMAAGAFIGAQVGSRLA 222

Query: 256 YMIGKKYLTIGFSMI 270
              G K +     +I
Sbjct: 223 MRFGPKLIRPLLVVI 237


>gi|118474296|ref|YP_891549.1| hypothetical protein CFF8240_0347 [Campylobacter fetus subsp. fetus
           82-40]
 gi|118413522|gb|ABK81942.1| hypothetical protein CFF8240_0347 [Campylobacter fetus subsp. fetus
           82-40]
          Length = 247

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 76/215 (35%), Gaps = 16/215 (7%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +  A+G S+  +  +S+     + + G                   ++  ++ +    +L
Sbjct: 40  IKYAIGISVMQMIFSSLFGSYINYKKGMFKFGEGFYVGIGGIFGAFLSGFIVKYTPSLWL 99

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LM 185
              FA    +M I    +     E K     +  I G+  G +  ++G+GGG+  +L   
Sbjct: 100 ECMFASLLFIMIIKAFIKKSFASEEKKLSKPILIIIGIFVGIMGVSVGIGGGMLISLIFF 159

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
            F G  I KA +              +    +G     L  +  GF        +   +I
Sbjct: 160 GFLGYDIKKAVSMGLFFVVFAGVSGFISLSING-----LVDYYHGF-------ALGIGAI 207

Query: 246 LITPLATKLSYMIGK---KYLTIGFSMIMFTTSFV 277
           +     T  S  I +   K L +GF+MI+F  +  
Sbjct: 208 IGVYFGTNASIKIDRTKQKRLNLGFNMILFLLTIK 242


>gi|23502179|ref|NP_698306.1| hypothetical protein BR1303 [Brucella suis 1330]
 gi|62290207|ref|YP_222000.1| hypothetical protein BruAb1_1304 [Brucella abortus bv. 1 str.
           9-941]
 gi|82700129|ref|YP_414703.1| hypothetical protein BAB1_1323 [Brucella melitensis biovar Abortus
           2308]
 gi|161619254|ref|YP_001593141.1| hypothetical protein BCAN_A1326 [Brucella canis ATCC 23365]
 gi|163843565|ref|YP_001627969.1| hypothetical protein BSUIS_A1353 [Brucella suis ATCC 23445]
 gi|189024443|ref|YP_001935211.1| hypothetical protein BAbS19_I12360 [Brucella abortus S19]
 gi|225852794|ref|YP_002733027.1| hypothetical protein BMEA_A1350 [Brucella melitensis ATCC 23457]
 gi|254689513|ref|ZP_05152767.1| hypothetical protein Babob68_04919 [Brucella abortus bv. 6 str.
           870]
 gi|254694001|ref|ZP_05155829.1| hypothetical protein Babob3T_04924 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254697651|ref|ZP_05159479.1| hypothetical protein Babob28_08076 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254704579|ref|ZP_05166407.1| hypothetical protein Bsuib36_11741 [Brucella suis bv. 3 str. 686]
 gi|254706525|ref|ZP_05168353.1| hypothetical protein BpinM_05963 [Brucella pinnipedialis
           M163/99/10]
 gi|254710364|ref|ZP_05172175.1| hypothetical protein BpinB_08833 [Brucella pinnipedialis B2/94]
 gi|254714360|ref|ZP_05176171.1| hypothetical protein BcetM6_13607 [Brucella ceti M644/93/1]
 gi|254717259|ref|ZP_05179070.1| hypothetical protein BcetM_12745 [Brucella ceti M13/05/1]
 gi|254719350|ref|ZP_05181161.1| hypothetical protein Bru83_07373 [Brucella sp. 83/13]
 gi|254730541|ref|ZP_05189119.1| hypothetical protein Babob42_04939 [Brucella abortus bv. 4 str.
           292]
 gi|256031858|ref|ZP_05445472.1| hypothetical protein BpinM2_14619 [Brucella pinnipedialis
           M292/94/1]
 gi|256061378|ref|ZP_05451522.1| hypothetical protein Bneo5_13540 [Brucella neotomae 5K33]
 gi|256160053|ref|ZP_05457748.1| hypothetical protein BcetM4_13617 [Brucella ceti M490/95/1]
 gi|256255259|ref|ZP_05460795.1| hypothetical protein BcetB_13384 [Brucella ceti B1/94]
 gi|256257762|ref|ZP_05463298.1| hypothetical protein Babob9C_10516 [Brucella abortus bv. 9 str.
           C68]
 gi|256263720|ref|ZP_05466252.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|256369724|ref|YP_003107234.1| hypothetical protein BMI_I1316 [Brucella microti CCM 4915]
 gi|260168993|ref|ZP_05755804.1| hypothetical protein BruF5_11607 [Brucella sp. F5/99]
 gi|260546752|ref|ZP_05822491.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260566179|ref|ZP_05836649.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260755035|ref|ZP_05867383.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260758251|ref|ZP_05870599.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260762078|ref|ZP_05874421.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884046|ref|ZP_05895660.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261214291|ref|ZP_05928572.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|261219076|ref|ZP_05933357.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261222455|ref|ZP_05936736.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261313987|ref|ZP_05953184.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261317927|ref|ZP_05957124.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261322136|ref|ZP_05961333.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261325379|ref|ZP_05964576.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261755262|ref|ZP_05998971.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|261758485|ref|ZP_06002194.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|265984351|ref|ZP_06097086.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|265988956|ref|ZP_06101513.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265998422|ref|ZP_06110979.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|294852639|ref|ZP_06793312.1| hypothetical protein BAZG_01567 [Brucella sp. NVSL 07-0026]
 gi|297248598|ref|ZP_06932316.1| hypothetical protein BAYG_01558 [Brucella abortus bv. 5 str. B3196]
 gi|306839124|ref|ZP_07471941.1| Protein of unknown function DUF81 [Brucella sp. NF 2653]
 gi|23348145|gb|AAN30221.1| conserved hypothetical protein [Brucella suis 1330]
 gi|62196339|gb|AAX74639.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616230|emb|CAJ11279.1| Protein of unknown function DUF81 [Brucella melitensis biovar
           Abortus 2308]
 gi|161336065|gb|ABX62370.1| hypothetical protein BCAN_A1326 [Brucella canis ATCC 23365]
 gi|163674288|gb|ABY38399.1| hypothetical protein BSUIS_A1353 [Brucella suis ATCC 23445]
 gi|189020015|gb|ACD72737.1| Protein of unknown function DUF81 [Brucella abortus S19]
 gi|225641159|gb|ACO01073.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
 gi|255999886|gb|ACU48285.1| hypothetical protein BMI_I1316 [Brucella microti CCM 4915]
 gi|260095802|gb|EEW79679.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260155697|gb|EEW90777.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260668569|gb|EEX55509.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260672510|gb|EEX59331.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675143|gb|EEX61964.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260873574|gb|EEX80643.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260915898|gb|EEX82759.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|260921039|gb|EEX87692.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|260924165|gb|EEX90733.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261294826|gb|EEX98322.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261297150|gb|EEY00647.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261301359|gb|EEY04856.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261303013|gb|EEY06510.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261738469|gb|EEY26465.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|261745015|gb|EEY32941.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|262553046|gb|EEZ08880.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|263093777|gb|EEZ17782.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|264661153|gb|EEZ31414.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|264662943|gb|EEZ33204.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|294821228|gb|EFG38227.1| hypothetical protein BAZG_01567 [Brucella sp. NVSL 07-0026]
 gi|297175767|gb|EFH35114.1| hypothetical protein BAYG_01558 [Brucella abortus bv. 5 str. B3196]
 gi|306405671|gb|EFM61933.1| Protein of unknown function DUF81 [Brucella sp. NF 2653]
 gi|326409327|gb|ADZ66392.1| conserved hypothetical protein [Brucella melitensis M28]
 gi|326539036|gb|ADZ87251.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 261

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 99/259 (38%), Gaps = 27/259 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+  A+F++G +  + G GGG++ +P L     L GI        A+GT+       S 
Sbjct: 10  LLLTAAAFIAGIIDSIAG-GGGMITIPALL----LAGIPPVE----ALGTNKLQGLFGSS 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + R G +N+           + +V+ +L+ + +  + +  A  +  + + I    
Sbjct: 61  SATIAYARKGHVNILQQWPEALASLLGSVLGALLATVLPVNIMRAALPMLLIAIAIYFAL 120

Query: 144 RDRLYCERKFPDNYVKYIWGM----VTGFLSGALGVG-GGIFTNLLMLFYGASIYKATAT 198
           +  L    +       +++G+    + GF  G  G G G  F    + F G  + KATA 
Sbjct: 121 KPSLGDVDRA-RRIGPFLFGVTLVPLIGFYDGLFGPGTGSFFMLAFVAFAGYGVLKATAH 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++       L                ++G +N    + +     +   +  +L+  I
Sbjct: 180 TKLLNCASNIGGLATFA------------AVGVINWKIGISMGIAQFIGAQIGARLAMKI 227

Query: 259 GKKYLTIGFSMIMFTTSFV 277
           G + +     ++    +  
Sbjct: 228 GSRIIKPLLIVVSLALAGR 246



 Score = 40.4 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 13/124 (10%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
             +      + G +    G GGG+ T   +L  G    +A  T+       +  A +   
Sbjct: 9   TLLLTAAAFIAGIIDSIAG-GGGMITIPALLLAGIPPVEALGTNKLQGLFGSSSATIAYA 67

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                         G VNI         S+L + L   L+ ++    +     M++   +
Sbjct: 68  RK------------GHVNILQQWPEALASLLGSVLGALLATVLPVNIMRAALPMLLIAIA 115

Query: 276 FVFA 279
             FA
Sbjct: 116 IYFA 119


>gi|113474376|ref|YP_720437.1| hypothetical protein Tery_0509 [Trichodesmium erythraeum IMS101]
 gi|110165424|gb|ABG49964.1| protein of unknown function DUF81 [Trichodesmium erythraeum IMS101]
          Length = 260

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+     G L+GLFGVGGG++MVP+               + VA+ TSLGVI  TS+ + 
Sbjct: 146 IITGGTVGLLAGLFGVGGGVIMVPLQIILL-------DEPIKVAVQTSLGVIVITSISAS 198

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + H  +G +         F   I   + +  +  +  S ++ AF    +++ +    +
Sbjct: 199 LGHYFNGNVVFIGGLFLGFGGLIGAQIGTRFLPKLSDSVVSFAFKSLLIILAVYTFWK 256



 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 68/185 (36%), Gaps = 20/185 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            VMVP+L                 A+ TS+  I  T+    +++ R G I  + +     
Sbjct: 29  TVMVPLLVAL--------GYQPIQAVATSVLAITVTATSGTLQNWRMGYIKPQRVLLLSL 80

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV------- 158
              + T     +      + L   F++  L+   L+  R R+  + K             
Sbjct: 81  PALLATQGGVYLAEKFSPTLLLLGFSLLMLVSIYLLELRKRVIAQYKNAGKNGEKQQWIN 140

Query: 159 ----KYIWGMVTGFLSGALGVGGGIFTNLL-MLFYGASIYKATATSAGVSALIAFPALLV 213
               + I G   G L+G  GVGGG+    L ++     I  A  TS GV  + +  A L 
Sbjct: 141 PAIARIITGGTVGLLAGLFGVGGGVIMVPLQIILLDEPIKVAVQTSLGVIVITSISASLG 200

Query: 214 RIYSG 218
             ++G
Sbjct: 201 HYFNG 205


>gi|219112005|ref|XP_002177754.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410639|gb|EEC50568.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 629

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 20/122 (16%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G  +G+FG+GGG+V+VP+L       G+       VA  TS  +I  TS+ S   +  
Sbjct: 490 IAGVFAGMFGIGGGVVIVPLLL----HSGVHPG----VASATSSAMILFTSLASVSTYFV 541

Query: 92  HGTINMKILKDWIFVLPITTVVTSLM------ISHVDKS------FLNKAFAIFCLLMGI 139
            G I          +  I++ +  ++                   +L        L+  +
Sbjct: 542 FGLIVADFAMAGFVIGFISSTLGQILMRRVRQAKSASGRKFERNSYLAFVIGGVVLVSAL 601

Query: 140 LM 141
           LM
Sbjct: 602 LM 603



 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            + G  +G  G+GGG+    L+L  G     A+ATS+ +    +  ++      G  +  
Sbjct: 489 TIAGVFAGMFGIGGGVVIVPLLLHSGVHPGVASATSSAMILFTSLASVSTYFVFGLIVAD 548

Query: 224 --LPPWSLGFVN 233
             +  + +GF++
Sbjct: 549 FAMAGFVIGFIS 560


>gi|90021311|ref|YP_527138.1| hypothetical protein Sde_1666 [Saccharophagus degradans 2-40]
 gi|89950911|gb|ABD80926.1| protein of unknown function DUF81 [Saccharophagus degradans 2-40]
          Length = 261

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 93/272 (34%), Gaps = 35/272 (12%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I A    G   GL GVGGG +M P+L            +   +A+GT L   A T 
Sbjct: 3   ILFYIFAGAGVGLAVGLTGVGGGSLMTPLLIL--------SGVPEKIAIGTDLLYAAATK 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD---KSFLNKAFAIFCLLMGI 139
             +   H R GTI  +I+          +++TS +++  D      L+    +  +L G+
Sbjct: 55  TGAMHAHHRQGTIRWQIVLMLAAGSLPASLITSYILNTWDFDYGPRLSNILGVMLILTGV 114

Query: 140 LMLKRDRLYCERKFP----------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY- 188
           ++  + RL  E                 + +  G+  G       VG G F   L+L   
Sbjct: 115 VVFLKQRLQGETSATELSVGWVHKHSKSITFFAGIALGVFVTLSSVGAGAFCAALLLTLY 174

Query: 189 -GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                     T    +  +   A +   ++              ++   +  +L  S+  
Sbjct: 175 PRLPALHVVGTDIAHAVPLTLIAGIGHFFND------------NIDFKLLGGLLIGSLPA 222

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             L +K +  +    L    + ++      FA
Sbjct: 223 VHLGSKAAAKVPNSILQPILASLLIIIGIKFA 254


>gi|307265693|ref|ZP_07547246.1| protein of unknown function DUF81 [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|326389206|ref|ZP_08210774.1| protein of unknown function DUF81 [Thermoanaerobacter ethanolicus
           JW 200]
 gi|306919337|gb|EFN49558.1| protein of unknown function DUF81 [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|325994569|gb|EGD52993.1| protein of unknown function DUF81 [Thermoanaerobacter ethanolicus
           JW 200]
          Length = 277

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 86/260 (33%), Gaps = 48/260 (18%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           ++P L+           + +  A+G S+  +  TS  + + + R    N++I        
Sbjct: 30  VIPALTLLL-------GVDIKYAIGASIVSVIATSSGAAVAYVRDKITNLRIGMFLEIAT 82

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK-------- 159
               +  + +   +   +L   F I  L   + ML++      +    + +         
Sbjct: 83  TTGAITGAYIAGLISPKYLYIIFGIVLLYSALAMLRKRHEELPQNVVSHPLAKKLKLEGS 142

Query: 160 --------------------YIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATAT 198
                               +    V G LSG LG+G GIF  + M LF    +  +TAT
Sbjct: 143 YFDKVLNKEVKYKVAGVYSGFGTMYVAGVLSGLLGIGSGIFKVMAMDLFMKLPMKVSTAT 202

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  +  + A  +  V +              G+++      +    +L   L T++   +
Sbjct: 203 SNFMIGVTAAASAGVYLMR------------GYIDPKIAGPVALGVLLGAMLGTRIMEKL 250

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               +   F  ++   S   
Sbjct: 251 KNTTIRKIFIPVLAYISIQM 270



 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           +++G LSGL G+G G+  V         M +   + M V+  TS  +I  T+  S   + 
Sbjct: 167 YVAGVLSGLLGIGSGIFKV-------MAMDLFMKLPMKVSTATSNFMIGVTAAASAGVYL 219

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I+ KI       + +  ++ + ++  +  + + K F      + I ML +
Sbjct: 220 MRGYIDPKIAGPVALGVLLGAMLGTRIMEKLKNTTIRKIFIPVLAYISIQMLIK 273


>gi|260581623|ref|ZP_05849420.1| permease [Haemophilus influenzae NT127]
 gi|260095216|gb|EEW79107.1| permease [Haemophilus influenzae NT127]
          Length = 269

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 97/264 (36%), Gaps = 12/264 (4%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I ++++    +  +S +FG+GGG++MVP+L   F        + + V   TSL ++  
Sbjct: 4   STIFILLICGICTNMVSAIFGIGGGVLMVPILRTLF------PELPIQVISATSLTIVMC 57

Query: 81  TSVMSF-MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           T++++    H++   I+   +  W   + I   +   +  +   + ++  F +    + I
Sbjct: 58  TALINLLFFHKQKIKIDYINMILWSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAI 117

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMV-----TGFLSGALGVGGGIFTNLLMLFYGASIYK 194
                        F  + ++   G +               GG I   L+    G    +
Sbjct: 118 KTFLNRSRIQIEVFNMSPIERAKGSISFCGGGLIAGITGIGGGSILAPLVGQLKGVKTQQ 177

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
               +  +  +     L   +   +  +      LG+VN   V ++   S  ++  + KL
Sbjct: 178 IAVYTNYMMIIGGIGNLYGYLTRAFPYDISLSGQLGYVNFLVVGVVTLGSFGMSFFSMKL 237

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
             ++         ++I+F  +   
Sbjct: 238 RGLMNPVLTRKLLAIILFCIAAYM 261


>gi|291530940|emb|CBK96525.1| Predicted permeases [Eubacterium siraeum 70/3]
          Length = 126

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L+GLFG GGG V VP     F+  G +       A  +S+ +I   S+++ 
Sbjct: 18  LLYGSICGFLNGLFGSGGGTVAVPA----FEKNGTEP----KKAHASSVALIFVLSLVTA 69

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + +  +G ++     ++I    I  ++ S ++  +    +   F +  +  G+ M+ 
Sbjct: 70  VIYLMNGKLDFGTAWEYIPYGLIGAILGSFLLGKIPDRLIRIIFGLLMIASGVRMIL 126



 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 48/135 (35%), Gaps = 12/135 (8%)

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             +   +      +   ++G + GFL+G  G GGG          G    KA A+S  + 
Sbjct: 2   NSKRKRKSDRTGKHAHLLYGSICGFLNGLFGSGGGTVAVPAFEKNGTEPKKAHASSVALI 61

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            +++    ++ + +G    G     + +             ++   L + L   I  + +
Sbjct: 62  FVLSLVTAVIYLMNGKLDFGTAWEYIPY------------GLIGAILGSFLLGKIPDRLI 109

Query: 264 TIGFSMIMFTTSFVF 278
            I F ++M  +    
Sbjct: 110 RIIFGLLMIASGVRM 124


>gi|157962478|ref|YP_001502512.1| hypothetical protein Spea_2657 [Shewanella pealeana ATCC 700345]
 gi|157847478|gb|ABV87977.1| protein of unknown function DUF81 [Shewanella pealeana ATCC 700345]
          Length = 257

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 99/260 (38%), Gaps = 28/260 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +  F++G +  + G GGGL+ +P L      MG+      H+A+GT+    +  S 
Sbjct: 11  AILALVGFIAGFIDAVSG-GGGLLSIPALLT----MGVPP----HLALGTNKLAASFGSS 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+   + +    +  +         I  V+ + ++ H+D  +L K   I  + + +  L 
Sbjct: 62  MAAYTYYKQRLFSPSLWYHTFIATFIGAVIGTFIVYHIDNQWLEKWLPIMIIAIALYTLF 121

Query: 144 RDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
           +            +K  +   +++ G+  GF  G  G G G F  +     +   +  + 
Sbjct: 122 QPNAMGDSNHKSPQKPKNKMKQWLQGLPLGFYDGFAGPGIGAFWTVSSTGLHKLPLLYSC 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++      +L++ I            +LG VN    L +    +  + +    + 
Sbjct: 182 GLARAMTFTSNLTSLIIFI------------ALGKVNFAIGLSMGVCMMAGSYIGAHSAI 229

Query: 257 MIGKKYLTIGFSMIMFTTSF 276
             G  ++   F  ++   + 
Sbjct: 230 KFGLPFIRPIFITVILLIAA 249


>gi|270291070|ref|ZP_06197293.1| permease [Pediococcus acidilactici 7_4]
 gi|304385350|ref|ZP_07367695.1| permease [Pediococcus acidilactici DSM 20284]
 gi|270280466|gb|EFA26301.1| permease [Pediococcus acidilactici 7_4]
 gi|304328557|gb|EFL95778.1| permease [Pediococcus acidilactici DSM 20284]
          Length = 281

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/253 (12%), Positives = 82/253 (32%), Gaps = 43/253 (16%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            ++ I   + +  A+G S+  +  TS  + + + R   +N+++         +  +V ++
Sbjct: 32  PVLTIGMGLDIKYAIGASIIAVIATSSGATIAYLRDEMLNLRVAMFLEIATTVGAIVGAI 91

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKR------------------------------DR 146
           M    + + L   F  F +     M ++                               +
Sbjct: 92  MTGLFNSTVLYVLFGSFLVFSSWNMYRKLRQGGSEEGSAKNDRLANQLNLNGSYYDKALK 151

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSAL 205
              + +  +           G  SG LG+G G F  + M       +  ++ATS  +  +
Sbjct: 152 KQIDYQVENVPGGSAVMFGAGLASGLLGIGSGAFKVMAMDNIMKMPLKPSSATSNLMMGV 211

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
            A  + +V  ++G     +               +    +    L +++   +  +++ +
Sbjct: 212 TAAASAMVYFFNGSIHADI------------AGPLAIGILFGAQLGSRIMQRLRPRWIRL 259

Query: 266 GFSMIMFTTSFVF 278
            F  ++       
Sbjct: 260 IFIPVLLYMGLQM 272



 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 11/131 (8%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV--AMGT 73
            D  V+ +       F +G  SGL G+G G         AF++M +D+ + M +  +  T
Sbjct: 154 IDYQVENVPGGSAVMFGAGLASGLLGIGSG---------AFKVMAMDNIMKMPLKPSSAT 204

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           S  ++  T+  S M +  +G+I+  I       +     + S ++  +   ++   F   
Sbjct: 205 SNLMMGVTAAASAMVYFFNGSIHADIAGPLAIGILFGAQLGSRIMQRLRPRWIRLIFIPV 264

Query: 134 CLLMGILMLKR 144
            L MG+ M+ +
Sbjct: 265 LLYMGLQMVLK 275


>gi|126177964|ref|YP_001045929.1| hypothetical protein Memar_0012 [Methanoculleus marisnigri JR1]
 gi|125860758|gb|ABN55947.1| protein of unknown function DUF81 [Methanoculleus marisnigri JR1]
          Length = 310

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 97/253 (38%), Gaps = 29/253 (11%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
           L G+ G GG  VM+P+L              + +A+GT+L  +  T++     H     +
Sbjct: 67  LGGIIGAGGCSVMLPILHFYL-------GYPVPIAIGTTLFAVIFTAISGGYGHLIRKNL 119

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVD--KSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
           ++K          I  V+ S + + +    + L     I  LL  + M+     + ++  
Sbjct: 120 DVKTTLWLGGFGIIGVVIGSYVFNLLSDQTALLGLILGIAFLLPAVRMIFEGVAHRKKSQ 179

Query: 154 PDNYV-------KYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSAL 205
           P+  V       K + G V G L+G +G+GGG      +++ + A +Y    TS      
Sbjct: 180 PEGNVIPGSEGRKGLLGFVVGILTGLVGLGGGYALVPGLIYLFNAPVYVTMGTSLATIIP 239

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           +A               G    + G+V IGA L++   +I+   L   +        L +
Sbjct: 240 LAVVG------------GGIKLAEGYVAIGAALLLAAGTIVGAQLGAAVIKKFHPATLKL 287

Query: 266 GFSMIMFTTSFVF 278
            F +     S  F
Sbjct: 288 IFGVYFLYVSVKF 300



 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 7/95 (7%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L   F          ++V MGTSL  I P +V+        G + +           
Sbjct: 215 VPGLIYLFNA-------PVYVTMGTSLATIIPLAVVGGGIKLAEGYVAIGAALLLAAGTI 267

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +   + + +I     + L   F ++ L + +  + 
Sbjct: 268 VGAQLGAAVIKKFHPATLKLIFGVYFLYVSVKFIL 302


>gi|284165551|ref|YP_003403830.1| hypothetical protein Htur_2277 [Haloterrigena turkmenica DSM 5511]
 gi|284015206|gb|ADB61157.1| protein of unknown function DUF81 [Haloterrigena turkmenica DSM
           5511]
          Length = 259

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 76/219 (34%), Gaps = 23/219 (10%)

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
           GT+      T ++    +   G +     +    VL  ++++ +L+ + V+       F 
Sbjct: 52  GTAHATFVVTGLVGSAAYLHSGEMRTGESRAIAVVLSASSILGALVGASVNAFVPRSLFG 111

Query: 132 IFC----LLMGILMLKRDRLYCER-------KFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
           +        +G ++L R+R            +    +     G   G  SG LG+GG + 
Sbjct: 112 VLLGGVSTTVGAVILYRERRGFNPFYDLEPLERRGQFALAGLGFALGICSGLLGIGGPVL 171

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
               ++  G  +  A A +   S  IA  A                   G V +   ++I
Sbjct: 172 AVPALVLVGVPMLLAVAVAQVQSIFIATFAAAGYALQ------------GNVLLPLAVVI 219

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
               +L      K+++MI  + L +   +++       A
Sbjct: 220 GTPLLLGVVTGWKVAHMIDPERLKVALGVVLLGVGPYLA 258



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 8/118 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +    F  G  SGL G+GG ++ VP L            + M +A+  +       +  +
Sbjct: 150 LAGLGFALGICSGLLGIGGPVLAVPALVLV--------GVPMLLAVAVAQVQSIFIATFA 201

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              +   G + + +       L +  V    +   +D   L  A  +  L +G  +  
Sbjct: 202 AAGYALQGNVLLPLAVVIGTPLLLGVVTGWKVAHMIDPERLKVALGVVLLGVGPYLAL 259


>gi|262368390|ref|ZP_06061719.1| permease [Acinetobacter johnsonii SH046]
 gi|262316068|gb|EEY97106.1| permease [Acinetobacter johnsonii SH046]
          Length = 298

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 51/282 (18%), Positives = 95/282 (33%), Gaps = 48/282 (17%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  L G   G+ GVGGG +M P+L   F+       I  H+A+GT L   A +    
Sbjct: 7   FILAGVLVGFCVGITGVGGGSLMTPILISLFR-------IEPHIAIGTDLLYAAISKFCG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
              H +   I   I+          +  T   + +           L         + G+
Sbjct: 60  SFVHAKKLNIVWPIVLWLAIGSIPASFATHWALDNYLSQSTHYKAVLTMVLGFMLTITGL 119

Query: 140 LMLKRDRLYC------ERKFPD---------------NYVKYIWGMVTGFLSGALGVGGG 178
            ++ R+++        + + PD                    + G+V G       VG G
Sbjct: 120 SIVFRNQIEKFFNKLRKDELPDMTEDLEKVQLQTSNKRKYIVMMGVVLGVFVTLSSVGAG 179

Query: 179 IFTNLLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
            F  + ++       + +   +    + L+ F A +  + SG     L            
Sbjct: 180 AFGIMALVIMFPNLPMIRIIGSDVVHAVLLTFVAGMGHMTSGNVDFHL------------ 227

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++ +L  SI    + T +S  + +K +     + +F     F
Sbjct: 228 LMWLLVGSIPAIIIGTLISSRLPEKIIRKVLGITLFALGVNF 269



 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 48/129 (37%), Gaps = 7/129 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            I++   + G    L  VG G   +  L   F       ++ M   +G+ +      + +
Sbjct: 159 YIVMMGVVLGVFVTLSSVGAGAFGIMALVIMF------PNLPMIRIIGSDVVHAVLLTFV 212

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-MLK 143
           + M H   G ++  +L   +       ++ +L+ S + +  + K   I    +G+  ML 
Sbjct: 213 AGMGHMTSGNVDFHLLMWLLVGSIPAIIIGTLISSRLPEKIIRKVLGITLFALGVNFMLN 272

Query: 144 RDRLYCERK 152
             +    + 
Sbjct: 273 PIKAKPVKP 281


>gi|23014600|ref|ZP_00054408.1| COG0730: Predicted permeases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 637

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 73/235 (31%), Gaps = 48/235 (20%)

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + +   +    +K  I       ++   + + +  S +     +F L+M    + 
Sbjct: 407 AASLRNDKAQLVQWDKVKPLIPWGIAGVILGYFIGNAIGDSVVGILLGLFALIMAGKAVM 466

Query: 144 -----------------------------------RDRLYCERKFPDNYVKYIWGMVTGF 168
                                              R +         +    + G+  G 
Sbjct: 467 EILQPNAGEETAESISAAEAEDEMDELMALADGTSRPKASGLALPEGHARSAVLGLPMGL 526

Query: 169 LSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            SG LG+ GG+    L  + G  S+  A A S+ +    +    +V    G         
Sbjct: 527 FSGILGISGGVIEVPLQRYVGRISLQNAIANSSVLVFWASVAGSVVAFLHGS-------- 578

Query: 228 SLGFVNIGA----VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           S G ++  A     L+++P + +   +  +L  ++  + L   ++  M   +   
Sbjct: 579 STGLIHWEAPVTLALVMIPGAYVGGIIGARLMRVLPVRVLKGVYAATMAAIALKM 633



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 15/124 (12%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V     G  SG+ G+ GG++ VP+             I +  A+  S  ++   SV   
Sbjct: 518 AVLGLPMGLFSGILGISGGVIEVPLQRYV-------GRISLQNAIANSSVLVFWASVAGS 570

Query: 87  MEHRRHGT----INMK----ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           +    HG+    I+ +    +    I    +  ++ + ++  +    L   +A     + 
Sbjct: 571 VVAFLHGSSTGLIHWEAPVTLALVMIPGAYVGGIIGARLMRVLPVRVLKGVYAATMAAIA 630

Query: 139 ILML 142
           + ML
Sbjct: 631 LKML 634


>gi|312135887|ref|YP_004003225.1| hypothetical protein Calow_1896 [Caldicellulosiruptor owensensis
           OL]
 gi|311775938|gb|ADQ05425.1| protein of unknown function DUF81 [Caldicellulosiruptor owensensis
           OL]
          Length = 276

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 54/286 (18%), Positives = 106/286 (37%), Gaps = 51/286 (17%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  I+V S ++G +  L G+GGGL+++P LS  F+         MH A    L  +  T
Sbjct: 1   MIAQILVVSVIAGFIGSLLGIGGGLIVIPFLSIVFKFN-------MHQAAAAGLVSVIAT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  +   + +    +++          I  V+ +++        L+  F I  L    LM
Sbjct: 54  SSGAASAYVKDRLTHLRTGMFLQLATVIGGVLGAILSGIFPTKILSLIFGILLLYNSFLM 113

Query: 142 LKRDRLYCERKF-------------------------------PDNYVKYIWGMVTGFLS 170
           +K  +   + +                                 +    ++  +  G +S
Sbjct: 114 IKNRKSDEKIQPAILQISKWAKKLKLYGRYFDKIQNREIEYSAQNIIGGFLMMIFAGIMS 173

Query: 171 GALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G LG+G GIF  L +          +TATS  +  + A  ++ + +  G  +        
Sbjct: 174 GLLGIGSGIFKVLALDTIMKLPFKVSTATSNFMMGVTALASISIYLARGDIVYD------ 227

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                 A   +    ++ + +  ++   I  +YL I F++I+  T+
Sbjct: 228 ------ACGAVAVGVLIGSTIGARVMPYIKSRYLKIAFALILIYTA 267



 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 11/129 (8%)

Query: 20  VDYICLIIVASFL----SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           ++Y    I+  FL    +G +SGL G+G G+  V  L    +L          V+  TS 
Sbjct: 152 IEYSAQNIIGGFLMMIFAGIMSGLLGIGSGIFKVLALDTIMKL-------PFKVSTATSN 204

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            ++  T++ S   +   G I           + I + + + ++ ++   +L  AFA+  +
Sbjct: 205 FMMGVTALASISIYLARGDIVYDACGAVAVGVLIGSTIGARVMPYIKSRYLKIAFALILI 264

Query: 136 LMGILMLKR 144
              + M+++
Sbjct: 265 YTAVEMIRK 273


>gi|212712230|ref|ZP_03320358.1| hypothetical protein PROVALCAL_03316 [Providencia alcalifaciens DSM
           30120]
 gi|212684976|gb|EEB44504.1| hypothetical protein PROVALCAL_03316 [Providencia alcalifaciens DSM
           30120]
          Length = 267

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 93/238 (39%), Gaps = 25/238 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +   L+   + L+G +  + G GGGL+ +P L            I     + T+      
Sbjct: 10  EVYALLFFVALLAGFIDSIAG-GGGLLTIPALLSV--------GITPVETLATNKLQAIG 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R   IN++     + +  I  ++ +++I  +D +FL +   +  + +G+ 
Sbjct: 61  GSFSATLYFARRKAINLREQIFPVIMTMIGAMIGAILIQSIDTAFLKQLLPVMVICVGLY 120

Query: 141 MLKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            L    L  + +             GM  GF  GA G G G       +L  G ++ KAT
Sbjct: 121 FLLTPSLGVQDRPQRVSMPIFGVAAGMGIGFYDGAFGPGTGSFLALAYVLLLGYNLAKAT 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A +  ++    F +L+  I  G        W LGFV       +L   ++   L  +L
Sbjct: 181 AHAKLLNFASNFGSLIFFIIGG-----HVLWVLGFV-------MLAGQMVGARLGARL 226


>gi|268590457|ref|ZP_06124678.1| inner membrane protein YfcA [Providencia rettgeri DSM 1131]
 gi|291314137|gb|EFE54590.1| inner membrane protein YfcA [Providencia rettgeri DSM 1131]
          Length = 267

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 97/238 (40%), Gaps = 25/238 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +   L+   +  +G +  + G GGGL+ +P L            I    A+ T+      
Sbjct: 10  EVYALLFFVALFAGFIDSIAG-GGGLLTIPALLSV--------GITPVEALATNKLQAVG 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R   I+++       +  I  ++ +++I  +D +FL +   I  + +G+ 
Sbjct: 61  GSFSSTLYFVRRKAIDLRAQLFPFIMTMIGAMLGAIVIQMIDTAFLKQLLPILVICVGLY 120

Query: 141 MLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L    +     +++    +     GM  GF  GA G G G F  L  +L  G ++ KAT
Sbjct: 121 FLLTPSIGVQDRQQRISMPFFGVAIGMTLGFYDGAFGPGTGSFLALGYVLLLGYNLAKAT 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A +  ++    F +L+  I  G        W+LGFV       +L   ++   L  +L
Sbjct: 181 AHAKLLNFASNFGSLVFFIIGG-----HVLWALGFV-------MLIGQMVGARLGARL 226


>gi|253988991|ref|YP_003040347.1| inner membrane protein yfca [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211638062|emb|CAR66689.1| inner membrane protein yfca [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780441|emb|CAQ83603.1| inner membrane protein yfca [Photorhabdus asymbiotica]
          Length = 260

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 90/248 (36%), Gaps = 25/248 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D I ++   +FL+G    + G GGGL+ +P L     L GI+    M     T+      
Sbjct: 4   DLIGILATIAFLAGFFDAIAG-GGGLITLPALF----LAGIEPISAM----ATNKLQATS 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S+ + +   R+G I  +     +    +  V  +L +S V K  L     I  +++ I 
Sbjct: 55  ASISATVTFARNGLIEWRNSVFLVLFSLLGGVSGALFVSVVSKRVLEACVPILLIVVAIY 114

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +   +L      ++       ++   V GF  G  G G G       M F G  + +A 
Sbjct: 115 FIFAPKLSGRSNRKRISVLLFSFLIAPVLGFYDGIFGPGTGSFLMMSFMFFCGLEMMQAM 174

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           + +   +A     AL + I  G             +     L +   S     L  + + 
Sbjct: 175 SFTKLANASCNIGALFIFITKGV------------IIWPLALAMAIASFAGAQLGARYAV 222

Query: 257 MIGKKYLT 264
            IG + + 
Sbjct: 223 KIGPRLVR 230


>gi|325292981|ref|YP_004278845.1| hypothetical protein AGROH133_06399 [Agrobacterium sp. H13-3]
 gi|325060834|gb|ADY64525.1| hypothetical protein AGROH133_06399 [Agrobacterium sp. H13-3]
          Length = 313

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 88/253 (34%), Gaps = 25/253 (9%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           +D  ++   ++   +  +G +  + G GGGL+ +P +     +MGI         +GT+ 
Sbjct: 48  QDIALNVFLVLFCVAIFAGFIDSIAG-GGGLITIPAML----IMGIPPLDT----LGTNK 98

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 S  + + + R G +N++       +  I   + +   + V    L        +
Sbjct: 99  LQSQFGSASATIAYARRGHVNLREQLPMAIMAMIGGELGAFTAAFVPSDLLRTIMPFLLI 158

Query: 136 LMGILMLKRDRLY---CERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGAS 191
            + +    + +L      R+            + GF  G  G G G F     +   G  
Sbjct: 159 AIALYFAFKPQLSDIDSHRRITPFVFGLTAAPLVGFYDGVFGPGAGSFYMLAFVGLAGFG 218

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           + KATA +  ++    F   +V    G        W LG       + +     +   + 
Sbjct: 219 MLKATAHTKLLNLGSNFGGFVVFAAGG-----AVLWKLG-------IAMGIGQFVGAQIG 266

Query: 252 TKLSYMIGKKYLT 264
           ++ +   G K + 
Sbjct: 267 SRFAMKNGAKIIR 279


>gi|294792942|ref|ZP_06758088.1| putative membrane protein [Veillonella sp. 6_1_27]
 gi|294455887|gb|EFG24251.1| putative membrane protein [Veillonella sp. 6_1_27]
          Length = 264

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 99/253 (39%), Gaps = 26/253 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ VA   +G +  + G GGGL+ VP +           ++   VA+G++     
Sbjct: 14  ILILVLLAVAGAFAGFVDSIVG-GGGLISVPAMLL--------TNLPPSVALGSNKLSSI 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  + +   R+  ++  +++  +    + +++ +L +  +   ++     I  + + +
Sbjct: 65  FGAGSASITFLRNHMVDFSLVRKLLPFTFVGSMLGTLAVVSLPPLYVKPIIIILLVCVTL 124

Query: 140 LMLKRDRLYCERKFPDNYVKYI-----WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            ++ +       +      K +     + +  G   G +G G G F  +  +F G     
Sbjct: 125 FVVFKKDWGEINRTSQVAGKALYICMAFALGIGIYDGFIGPGTGTFLIMGFIFTGFDFLH 184

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A +  ++      +LLV +Y            LG VN+   L      I+   L + L
Sbjct: 185 ASANAKILNFTSNLASLLVFLY------------LGHVNVKYGLATGAGQIIGAYLGSHL 232

Query: 255 SYMIGKKYLTIGF 267
           +   G   + + F
Sbjct: 233 AIAKGSSLVRVVF 245


>gi|296115692|ref|ZP_06834318.1| hypothetical protein GXY_07875 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295977669|gb|EFG84421.1| hypothetical protein GXY_07875 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 269

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 57/278 (20%), Positives = 110/278 (39%), Gaps = 25/278 (8%)

Query: 8   FSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
              M  +     + ++ L +++  + G   GL G GG ++ VP++      +G+ ++   
Sbjct: 3   LHFMGGMGMSPEMVHLLLELLSGVVVGFTLGLIGGGGSILAVPLMVYV---VGVPNA--- 56

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           HVA+GTS   +A  +++    H R  T+  +    +     +  +V +     VD   L 
Sbjct: 57  HVAIGTSAVSVAANALVGLGYHARARTVKWRCAGIFASCGILGALVGASAGKAVDGQKLL 116

Query: 128 KAFAIFCLLMGILMLKRDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
             FA+  + +G LML+          +    +      +G VTG LSG  G+GGG     
Sbjct: 117 LCFAVLMIGVGFLMLRGRHDRGCADAQCNRDNAPRVMAFGGVTGLLSGFFGIGGGFLIVP 176

Query: 184 LMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            ++      I  A  TS    A       +  + S            G+V+ G  ++ + 
Sbjct: 177 GLIASTHMPILNAVGTSLVAVAAFGLSTAISYMMS------------GYVDWGLAVLFIA 224

Query: 243 ISILITPLATKLSYMI--GKKYLTIGFSMIMFTTSFVF 278
              L +    ++S  +      LT+ F+ ++F  +   
Sbjct: 225 GGTLGSYGGMRVSRRMAGSSGMLTVFFAGVIFCVATYM 262



 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 50/122 (40%), Gaps = 9/122 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++    ++G LSG FG+GGG ++VP L            + +  A+GTSL  +A   + +
Sbjct: 152 VMAFGGVTGLLSGFFGIGGGFLIVPGLIA-------STHMPILNAVGTSLVAVAAFGLST 204

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--DKSFLNKAFAIFCLLMGILMLK 143
            + +   G ++  +   +I    + +     +   +      L   FA     +   M+ 
Sbjct: 205 AISYMMSGYVDWGLAVLFIAGGTLGSYGGMRVSRRMAGSSGMLTVFFAGVIFCVATYMIW 264

Query: 144 RD 145
           R 
Sbjct: 265 RS 266


>gi|261492049|ref|ZP_05988624.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261496843|ref|ZP_05993215.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261307526|gb|EEY08857.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312332|gb|EEY13460.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 263

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 102/263 (38%), Gaps = 14/263 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I ++I+   +    S LFG+GGG++M+P+L   F        + + V    SL ++ 
Sbjct: 1   MAVIIILIICGVVVNITSALFGIGGGVLMMPILHSLF------PELPLQVISACSLTIVI 54

Query: 80  PTSVMSF-MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            ++ ++  + H +   IN K +  W   + +   +   +      + +   F +  L + 
Sbjct: 55  GSATINLCLFHHQQIKINRKNVLIWSLAMMLGVQIGFELSFLFSDNSIIAIFILTLLTLS 114

Query: 139 ILMLK---RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
              L    R +   +    +  +  + G++ G      G    I   ++      S  + 
Sbjct: 115 FKTLFHKPRVKPKPKEAVSNATMCSLGGLIAGITGIGGGS---IMAPIVTQIRSVSPKQV 171

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNG-LPPWSLGFVNIGAVLIILPISILITPLATKL 254
              +  +  +     L   +   + LN  L  W +G+VN   V I++  S+     + KL
Sbjct: 172 AVYTNYMMVIGGIGNLYGYLSRPFVLNSTLATWQIGYVNFAIVGIVVMSSLFTVYFSMKL 231

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             ++  +  T    MI+F  +  
Sbjct: 232 RNILSPELTTKLLGMILFGIACY 254


>gi|300022250|ref|YP_003754861.1| hypothetical protein Hden_0720 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299524071|gb|ADJ22540.1| protein of unknown function DUF81 [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 264

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 73/219 (33%), Gaps = 15/219 (6%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +  +  L  ++  L G + GL G GG ++ VP+L     +         H+A+GTS   
Sbjct: 1   MLFSFDPLATLSGTLVGFVLGLIGGGGSVLAVPLLVYVVGVQ------SPHIAIGTSAVA 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +A +++   + H R   +       +     +   + S +    +   L   F I  +++
Sbjct: 55  VALSALAGLIGHARQNKVKWPCALVFASAGVVGAAIGSSLGKTFNGQHLLLLFGILMVVI 114

Query: 138 GILMLKRDRLYCERKF--------PDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFY 188
              M+ + R                   +    G   G +SG  G+GGG      LM   
Sbjct: 115 AAFMVFKKRADGNPDVCLNKTSAKSLLPLLLFNGSGVGLMSGFFGIGGGFLVVPGLMAAT 174

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
              +  A  +S                 SG     L  W
Sbjct: 175 DMPLIFAIGSSLVSVVAFGTTTAFNYALSGLVDWPLAAW 213



 Score = 38.1 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 14/124 (11%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG--ASIYKATATSAGVSALIAFPALLVR 214
            +  + G + GF+ G +G GG +    L+++     S + A  TSA   AL A   L+  
Sbjct: 7   PLATLSGTLVGFVLGLIGGGGSVLAVPLLVYVVGVQSPHIAIGTSAVAVALSALAGLIGH 66

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                            V     L+     ++   + + L      ++L + F ++M   
Sbjct: 67  ARQNK------------VKWPCALVFASAGVVGAAIGSSLGKTFNGQHLLLLFGILMVVI 114

Query: 275 SFVF 278
           +   
Sbjct: 115 AAFM 118


>gi|46446183|ref|YP_007548.1| hypothetical protein pc0549 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46399824|emb|CAF23273.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 251

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 78/213 (36%), Gaps = 10/213 (4%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            +A+  SL ++   +++  + +     ++ + +  +     I + + + +   +      
Sbjct: 39  KLAVAESLAIVGVIALVGAIPYAIRQQVHWRTVGFFGLAGIIGSYIGACIAHSISGRVQL 98

Query: 128 KAFAIFCLLMGILMLKRDRL--YCERKFPDNYVKYIWGMVTGFLSGALGVGGGI-FTNLL 184
             F    L++  +MLK  +     +       V  + G + G L+G  GVGGG     +L
Sbjct: 99  FIFGSVMLIVAWIMLKDKKWFQRNKDTSHSTLVSLLSGFLLGQLTGCSGVGGGFIIVPIL 158

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           ++    SIY A  TS  + AL A  A             L   S   VN   + +     
Sbjct: 159 IVILNLSIYVAIGTSLMIIALNALTAF-------SQQAFLLQRSGMHVNWKVIALFSLFG 211

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           ++ + +   +   I   +L   F  +M      
Sbjct: 212 VIGSLIGGTIVKYIPAVHLRKLFGTLMLPLGVY 244



 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 12/121 (9%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +++ FL G L+G  GVGGG            ++ +  ++ ++VA+GTSL +IA  ++ +F
Sbjct: 133 LLSGFLLGQLTGCSGVGGGF-------IIVPILIVILNLSIYVAIGTSLMIIALNALTAF 185

Query: 87  -----MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                +  R    +N K++  +     I +++   ++ ++    L K F    L +G+ +
Sbjct: 186 SQQAFLLQRSGMHVNWKVIALFSLFGVIGSLIGGTIVKYIPAVHLRKLFGTLMLPLGVYI 245

Query: 142 L 142
           L
Sbjct: 246 L 246


>gi|238620550|ref|YP_002915376.1| protein of unknown function DUF81 [Sulfolobus islandicus M.16.4]
 gi|238381620|gb|ACR42708.1| protein of unknown function DUF81 [Sulfolobus islandicus M.16.4]
 gi|323478153|gb|ADX83391.1| conserved hypothetical protein [Sulfolobus islandicus HVE10/4]
          Length = 286

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 98/292 (33%), Gaps = 52/292 (17%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +++  ++++ S LSG L  L G+GG   +VP+ +          ++ +  A G SL    
Sbjct: 5   IEFFVIVVLISALSGILGALTGLGGATFLVPIYTLYL-------NVPIAYASGASLISTI 57

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN----KAFAIFCL 135
            TS  +   + +    N+KI           ++  +L ++++    L       F I  L
Sbjct: 58  ATSSGAASAYIKDRITNVKIGMGLEIATTTGSIAGALTVAYIYAHHLEFIVYIVFGIVLL 117

Query: 136 LMGILMLKRDRLYCERKFPDNYVKY----------------------------IWGMVTG 167
               + L + +    +    ++                               I     G
Sbjct: 118 SQVYVQLAKSKFELPKPIKPDWTTRVFELYGKYYDTVLKREVEYHGVRWWLGEIIMFFAG 177

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           F+SG LG+G G    L M +     +  +T TS  +  + A     +    G+    L  
Sbjct: 178 FISGLLGIGSGALKVLGMDWAMNLPMKVSTTTSNFMIGVTAATGSSIYWIFGYIQPFLAA 237

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +                ++   + TK+   I  K +   F++I+       
Sbjct: 238 GT------------ALGVLIGAFIGTKILVRITNKTIRYIFTVILIFLGIQM 277



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +  F +G +SGL G+G G + V  +  A        ++ M V+  TS  +I  T+ 
Sbjct: 167 WLGEIIMFFAGFISGLLGIGSGALKVLGMDWAM-------NLPMKVSTTTSNFMIGVTAA 219

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +   G I   +       + I   + + ++  +    +   F +  + +GI M+ 
Sbjct: 220 TGSSIYWIFGYIQPFLAAGTALGVLIGAFIGTKILVRITNKTIRYIFTVILIFLGIQMIL 279

Query: 144 R 144
           R
Sbjct: 280 R 280


>gi|330968149|gb|EGH68409.1| hypothetical protein PSYAC_26631 [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 248

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 102/261 (39%), Gaps = 23/261 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++     GTL GLFG+ GGLV +P L   F L          +A GT+L ++ P  
Sbjct: 4   VVMFVLLGAAMGTLGGLFGIDGGLVAIPALGVLFGLD-------QQLAQGTALLMVLPNV 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI--- 139
           +++   + +   I ++     I    I   +TS++   +D   +   F  F +++ +   
Sbjct: 57  LLALWRYNQRNRILLRNALMLIIPSFIFAWLTSMLAVRIDPQSMRLGFVAFLVILTVFNV 116

Query: 140 -LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             M  R+ L       + Y+  +              GG + T +L   +GA+   A   
Sbjct: 117 AQMYWRNTLASGGLRHEKYLWLLGVGSGVTGGLFGVGGGVVATPILTSVFGATQVVAQGL 176

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++A              + L+    WS+G       + +    +       KL++ +
Sbjct: 177 ALSLAAP-----STGITLVTYALHDHVNWSMG-------IPLAVGGLASISWGVKLAHSL 224

Query: 259 GKKYLTIGFSMIMFTTSFVFA 279
            ++ L + F + +   + + A
Sbjct: 225 PERTLRLMFCVFLVLCAVILA 245


>gi|319897700|ref|YP_004135897.1| hypothetical protein HIBPF15040 [Haemophilus influenzae F3031]
 gi|317433206|emb|CBY81580.1| conserved hypothetical protein [Haemophilus influenzae F3031]
          Length = 269

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 98/264 (37%), Gaps = 12/264 (4%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I ++++    +  +S +FG+GGG++MVP+L   F        + + V   TSL ++  
Sbjct: 4   STIFILLICGICTNMVSAIFGIGGGVLMVPILRTLF------PELPIQVISATSLTIVMC 57

Query: 81  TSVMS-FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           T++++    H++   I+   +  W   + I   +   +  +   + ++  F +    + I
Sbjct: 58  TALINLLFFHKQKIKIDYINMILWSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAI 117

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTG-----FLSGALGVGGGIFTNLLMLFYGASIYK 194
                        F  + ++   G ++              GG I   L+    G    +
Sbjct: 118 KTFLNRSRIQIEVFNMSPIERAKGSISCCGGGLIAGITGIGGGSILAPLVGQLKGVKTQQ 177

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
               +  +  +     L   +   +  +      LG+VN   V ++   S  ++  + KL
Sbjct: 178 IAVYTNYMMIIGGIGNLYGYLTRAFPYDISLSSQLGYVNFFVVGVVTLGSFGMSFFSMKL 237

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
             ++         ++I+F  +   
Sbjct: 238 RGLMNPVLTRKLLAIILFCIAAYM 261


>gi|62258462|gb|AAX77796.1| unknown protein [synthetic construct]
          Length = 284

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 101/263 (38%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +I+  F+ G   GL G GG ++ VP+L+           +  H A+  SL V+  T++
Sbjct: 27  MFLIIFGFICGIALGLTGGGGSILAVPLLTY-------GVGLDFHSAVTISLLVVGFTAI 79

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + + +   I+   +   I    +   + S +   +    L  +F+I  +L+G   L 
Sbjct: 80  FGLIVNYKQHDIHYIAVAVMICTGVVFAPIGSYISQDLSDKLLMLSFSILMILIGAWSLL 139

Query: 144 RDRLYCERK--------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYK 194
           + ++    +                I G V G L+G  GVGGG      ++F     I +
Sbjct: 140 KAKIMSSSQKSVCKSIGSRCIVALLISGAVVGTLTGFFGVGGGFLIVPALVFITAMPIKR 199

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A  TS  V  +++    +              +    ++     + +  S +   LATK+
Sbjct: 200 AINTSLLVIFVVSISGFIS------------HYDKANMSWYIASMFIVGSAIGMLLATKV 247

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K L   F++++     V
Sbjct: 248 KKSLNDKVLQTIFAIMLVILGVV 270



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 7/121 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++++  + GTL+G FGVGGG ++VP L           ++ +  A+ TSL VI   S
Sbjct: 160 IVALLISGAVVGTLTGFFGVGGGFLIVPALVFI-------TAMPIKRAINTSLLVIFVVS 212

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +  F+ H     ++  I   +I    I  ++ + +   ++   L   FAI  +++G+++ 
Sbjct: 213 ISGFISHYDKANMSWYIASMFIVGSAIGMLLATKVKKSLNDKVLQTIFAIMLVILGVVIY 272

Query: 143 K 143
            
Sbjct: 273 L 273


>gi|253988909|ref|YP_003040265.1| hypothetical protein PAU_01428 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780359|emb|CAQ83520.1| putative permease (putative membrane protein) [Photorhabdus
           asymbiotica]
          Length = 266

 Score = 66.6 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 104/261 (39%), Gaps = 25/261 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +   L+ + + ++G +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 9   EVYVLLFLVAVIAGFIDSISG-GGGLLTIPALLSV--------GVSPVQALATNKLQAVG 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R+G +++K  +  I +    ++  ++++  +   FL++   +  +++G+ 
Sbjct: 60  GSFSASLYFVRYGAVDLKSQRFAILMTLFGSMAGAIIVQFMKPDFLSQLLPVMVIIIGLY 119

Query: 141 MLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
            L      R    R+        + G   G   G  G G G F   + +   G ++ K+T
Sbjct: 120 FLLTPAIGREDRHRRLTPVAFACLAGGGLGLYDGIFGPGVGSFYALVYVTLCGYNLAKST 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++      +L++ I  G  L     W LGFV       +L   ++   L   L  
Sbjct: 180 AHAKVLNFASNMGSLILFILGGQVL-----WGLGFV-------MLAGQVIGARLGASLVL 227

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G+K +     +I F  S  
Sbjct: 228 THGQKLIRPMIVIISFLMSIK 248


>gi|163754008|ref|ZP_02161131.1| hypothetical protein KAOT1_20337 [Kordia algicida OT-1]
 gi|161326222|gb|EDP97548.1| hypothetical protein KAOT1_20337 [Kordia algicida OT-1]
          Length = 265

 Score = 66.6 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 8/120 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI++   + G ++G+ G GGG +++P L           ++ M VA+GTSL +IA  S++
Sbjct: 146 LILIEGLVVGAITGMIGAGGGFLIIPALVLL-------ANVEMKVAVGTSLIIIAFKSLL 198

Query: 85  SFM-EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            F+        I+ + L  +  +  +   + S + + VD   L K F  F  +M I +  
Sbjct: 199 GFLLGDALTMEIDWEFLTIFTAISLVGIFIGSYLGNFVDGKKLKKGFGYFIFVMAIFIFY 258



 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 92/247 (37%), Gaps = 35/247 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VPVL+  F       S+   VA   SL ++  ++++  ++    G ++ +    +   
Sbjct: 26  LAVPVLAYLF-------SVNEKVATAYSLFIVGTSALVGGLKQHLKGFVDWRTAIVFGIP 78

Query: 107 LPITTVVTSLMISHVDKSFLNKA-----------FAIFCLLM---GILMLK--RDRLYCE 150
             I   +    +       L              F +F +LM    + MLK  ++++   
Sbjct: 79  AIIGVSLVRYYVVPALPDVLFTIGNFEFTRRMGMFGLFAILMFPAALSMLKERKEKISSG 138

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFP 209
               +  +  I G+V G ++G +G GGG      ++      +  A  TS     +IAF 
Sbjct: 139 EVSYNYPLILIEGLVVGAITGMIGAGGGFLIIPALVLLANVEMKVAVGTSL---IIIAFK 195

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           +LL  +                ++   + I   IS++   + + L   +  K L  GF  
Sbjct: 196 SLLGFLLGDALTME--------IDWEFLTIFTAISLVGIFIGSYLGNFVDGKKLKKGFGY 247

Query: 270 IMFTTSF 276
            +F  + 
Sbjct: 248 FIFVMAI 254


>gi|330958122|gb|EGH58382.1| hypothetical protein PMA4326_06035 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 261

 Score = 66.6 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 99/273 (36%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +VA  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   FVVAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + HR++  I+ K+            ++T   +S +        + + +A     LL  +
Sbjct: 60  VLVHRKNDNIDWKVTGLLTLGSVPAVLMTLWFLSSLHTAPDALNAIIKQALGFVLLLTAL 119

Query: 140 LMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + RL                     +  I G++ G +     +G G      L +L
Sbjct: 120 AILFKKRLLAFAHGRGDDHSFFSGTSLTVLTVITGLILGTMVALTSIGAGALGTVALFIL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +              + GL   S+G +N   +  +L  S+ 
Sbjct: 180 YPLLPTRRLVGTEIAHAVPLTL------------VAGLGHASMGNMNWELLGWLLMGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + ++  +    L    ++++    F  A
Sbjct: 228 GIYLGSHMAGRVSDDLLRPCLAVMLGIIGFKLA 260



 Score = 40.8 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 148 VLTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G +N ++L   +        + S M   V    L    A+   ++G  +  
Sbjct: 202 VAGLGHASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDDLLRPCLAVMLGIIGFKLAF 261



 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 28/58 (48%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            N    + G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 4   GNLGFVVAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 61


>gi|164688795|ref|ZP_02212823.1| hypothetical protein CLOBAR_02442 [Clostridium bartlettii DSM
           16795]
 gi|164602271|gb|EDQ95736.1| hypothetical protein CLOBAR_02442 [Clostridium bartlettii DSM
           16795]
          Length = 266

 Score = 66.6 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 87/222 (39%), Gaps = 18/222 (8%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            +  + A+G +L      S +S   + ++  +++K     +  + I T+V S + S V  
Sbjct: 49  GMPAYQAVGIALASDVLASAVSAYTYGKNKNLDIKNGMIMMITVLIFTMVGSYISSLVPN 108

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY------IWGMVTGFLSGALGVGG 177
             +         L+G+  + +  +  +    +  VK       + G++ GF+ G +G GG
Sbjct: 109 KMMGNFSVYMTFLVGLKFIIKPVMTTKDDMEEKSVKTKIIQSILCGIMIGFICGFVGAGG 168

Query: 178 GIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G+   L++    G  +  A  TS  +    A    +     G    G+P + +       
Sbjct: 169 GMMLLLILTSVLGYELKTAVGTSVFIMTFTALTGAMSHFAIG----GMPDFKI------- 217

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +++ +  + +   ++ K +    ++ L     +++     + 
Sbjct: 218 LILCMLFTFVGAQVSAKFANKSSEEVLNRVLGIVLCAIGALM 259



 Score = 49.3 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 8/130 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           + +  V   I   I+   + G + G  G GGG++++ +L+             +  A+GT
Sbjct: 138 MEEKSVKTKIIQSILCGIMIGFICGFVGAGGGMMLLLILTSVL-------GYELKTAVGT 190

Query: 74  SLGVIAPTSVMSFMEHRRHGTI-NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           S+ ++  T++   M H   G + + KIL   +    +   V++   +   +  LN+   I
Sbjct: 191 SVFIMTFTALTGAMSHFAIGGMPDFKILILCMLFTFVGAQVSAKFANKSSEEVLNRVLGI 250

Query: 133 FCLLMGILML 142
               +G LM+
Sbjct: 251 VLCAIGALMI 260


>gi|77360916|ref|YP_340491.1| hypothetical protein PSHAa1992 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76875827|emb|CAI87048.1| conserved protein of unknown functions similar to YfcA
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 258

 Score = 66.6 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 98/261 (37%), Gaps = 28/261 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++   +  +G +  + G GGG++ VP L  A         +  H+ +GT+    +  S+
Sbjct: 12  AILCAVALAAGFIDAIAG-GGGMLTVPALLTA--------GLPPHLTLGTNKLAASFGSL 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   + +    N K     IF   I  ++ +L++ H+   FLNK   I  +++    L 
Sbjct: 63  TASYTYYKKDLFNPKFWLASIFATAIGALIGTLIVDHLSIDFLNKLLPIIIIVVACYSLF 122

Query: 144 RD-RLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKAT 196
                    + P         +++ G+  GF  G  G G G F      + Y  ++    
Sbjct: 123 GSLSTTEGSELPKLTQTMKIKQWLQGLSLGFFDGLAGPGTGTFWTASNGMLYKMNLLLNC 182

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S  ++ +  F +L+  +            +LG VN    + +    +L        + 
Sbjct: 183 GLSRSMNFVSNFISLITFV------------ALGHVNFLLGITMGFFIMLGAWFGAHSAI 230

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G K++   F+ ++   +  
Sbjct: 231 RFGSKFIRPVFNTMVILLALK 251


>gi|291557551|emb|CBL34668.1| Predicted permeases [Eubacterium siraeum V10Sc8a]
          Length = 126

 Score = 66.6 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L+GLFG GGG V VP     F+  G +       A  +S+ +I   S+++ 
Sbjct: 18  LLYGSICGFLNGLFGSGGGTVAVPA----FEKNGTEP----KKAHASSVALIFVLSLVTA 69

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + +  +G ++     ++I    I  ++ S ++  +    +   F +  +  G+ M+ 
Sbjct: 70  VIYLMNGKLDFGTALEYIPYGLIGAILGSFLLGKIPDRLIRIIFGLLMIASGVRMIL 126



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 12/135 (8%)

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             +   +    + Y   ++G + GFL+G  G GGG          G    KA A+S  + 
Sbjct: 2   NSKRKRKSDRTEKYTHLLYGSICGFLNGLFGSGGGTVAVPAFEKNGTEPKKAHASSVALI 61

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            +++    ++ + +G             ++ G  L  +P  ++   L + L   I  + +
Sbjct: 62  FVLSLVTAVIYLMNGK------------LDFGTALEYIPYGLIGAILGSFLLGKIPDRLI 109

Query: 264 TIGFSMIMFTTSFVF 278
            I F ++M  +    
Sbjct: 110 RIIFGLLMIASGVRM 124


>gi|282849110|ref|ZP_06258495.1| putative membrane protein [Veillonella parvula ATCC 17745]
 gi|282580814|gb|EFB86212.1| putative membrane protein [Veillonella parvula ATCC 17745]
          Length = 264

 Score = 66.6 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 99/253 (39%), Gaps = 26/253 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ VA   +G +  + G GGGL+ VP +           ++   VA+G++     
Sbjct: 14  ILILVLLAVAGAFAGFVDSIVG-GGGLISVPAMLL--------TNLPPSVALGSNKLSSI 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  + +   R+  ++  +++  +    + +++ +L +  +   ++     I  + + +
Sbjct: 65  FGAGSASITFLRNHMVDFSLVRKLLPFTFVGSMLGTLAVVSLPPLYVKPIIIILLVCVTL 124

Query: 140 LMLKRDRLYCERKFPDNYVKYI-----WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            ++ +       +      K +     + +  G   G +G G G F  +  +F G     
Sbjct: 125 FVVFKKDWGEINRTSQVTGKALYICMAFALGIGIYDGFIGPGTGTFLIMGFIFTGFDFLH 184

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A +  ++      +LLV +Y            LG VNI   L      I+   L + L
Sbjct: 185 ASANAKILNFTSNLASLLVFLY------------LGHVNITYGLATGAGQIIGAYLGSHL 232

Query: 255 SYMIGKKYLTIGF 267
           +   G   + + F
Sbjct: 233 AIAKGSSLVRVVF 245


>gi|223934555|ref|ZP_03626476.1| protein of unknown function DUF81 [bacterium Ellin514]
 gi|223897018|gb|EEF63458.1| protein of unknown function DUF81 [bacterium Ellin514]
          Length = 252

 Score = 66.6 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 90/234 (38%), Gaps = 22/234 (9%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VPVL  A        ++    A+  SL ++  TS+       R G ++ +    +  
Sbjct: 24  IITVPVLVYA-------ANVPAQSAVAMSLAIVGVTSIAGACMKWRQGLVHARASVLFSL 76

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--KRDRLYCERKFPDNYVKYIWG 163
              I  +    +   V  S L   FA   L++   ML  ++            +     G
Sbjct: 77  TGIIGALAGGQLTPLVRPSVLLVIFAGLMLVIAGRMLWARKQEDVPAAAQCRPWRCASAG 136

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           M  G ++G LGVGGG      ++ +G   + +A  TS  + AL +   L+  +  G    
Sbjct: 137 MGVGIMTGFLGVGGGFLIVPALMHFGRIPLKQAVGTSLVIIALNSLAGLVGHLGHGSVDW 196

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            L     G  ++ A++ +            +LS  + K+ L+  F+ ++   + 
Sbjct: 197 RL----TGIFSLLALIGMFA--------GVQLSRKVSKEKLSRWFAWVVIAVAI 238



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 7/118 (5%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A    G ++G  GVGGG ++VP L            I +  A+GTSL +IA  S+   + 
Sbjct: 135 AGMGVGIMTGFLGVGGGFLIVPALMHF-------GRIPLKQAVGTSLVIIALNSLAGLVG 187

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           H  HG+++ ++   +  +  I       +   V K  L++ FA   + + I +L R+R
Sbjct: 188 HLGHGSVDWRLTGIFSLLALIGMFAGVQLSRKVSKEKLSRWFAWVVIAVAIFVLIRNR 245


>gi|320450796|ref|YP_004202892.1| transport protein [Thermus scotoductus SA-01]
 gi|320150965|gb|ADW22343.1| transport protein [Thermus scotoductus SA-01]
          Length = 277

 Score = 66.6 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 56/277 (20%), Positives = 100/277 (36%), Gaps = 50/277 (18%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
            L+G +  L G+GGG+V+VP+L+  F        + + +A+G SL  +  TS  +   + 
Sbjct: 15  VLAGFVGALTGLGGGVVLVPMLTLLF-------GVDLKLALGASLVSVIATSSGAAAAYV 67

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD----- 145
           R G  N+++         +  V  + + + +    +   F +  L    + L+       
Sbjct: 68  REGFTNLRLGMLLEVATTLGAVAGASLTARLPHGVVAGIFGLVLLHSAYMGLRGWERGAR 127

Query: 146 -----------RLYCERKFPDNYVKYIWGM-----------VTGFLSGALGVGGGIFTNL 183
                      RL  +  +P       + +           + G LSG LG+G G    L
Sbjct: 128 ADPGPPDPLAVRLRLQGTYPGPRGSVPYAVRRVVPGFLLMGLAGVLSGLLGIGSGAVKVL 187

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
            M       YK + TS  +  + A     V +  G+    L            VL +L  
Sbjct: 188 AMDRIMGLPYKVSTTSTFMIGVTAAAGAGVYLRHGFIHPDLA--------FPVVLGVLLG 239

Query: 244 SILITPL--ATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++L   L    K+S       L + FS ++       
Sbjct: 240 AVLRARLLPGAKVS------RLRLLFSGVIALLGLEM 270



 Score = 42.0 bits (98), Expect = 0.085,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 8/116 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+G LSGL G+G G V V  + +    MG+   +       TS  +I  T+      + R
Sbjct: 169 LAGVLSGLLGIGSGAVKVLAMDRI---MGLPYKVST-----TSTFMIGVTAAAGAGVYLR 220

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
           HG I+  +    +  + +  V+ + ++     S L   F+    L+G+ ML +   
Sbjct: 221 HGFIHPDLAFPVVLGVLLGAVLRARLLPGAKVSRLRLLFSGVIALLGLEMLAQGLW 276


>gi|15806858|ref|NP_295581.1| hypothetical protein DR_1858 [Deinococcus radiodurans R1]
 gi|6459640|gb|AAF11413.1|AE002026_1 conserved hypothetical protein [Deinococcus radiodurans R1]
          Length = 250

 Score = 66.6 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 94/262 (35%), Gaps = 26/262 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +   +  +FL+G +  + G GGG + +P L            +     + T+  +   
Sbjct: 5   EVLLYGLPLAFLAGFIDAVAG-GGGTITLPTLFFM--------GLAPAQVVATNKLLAIF 55

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + ++  R G +   ++   I +    + + + ++  VD +          L +G L
Sbjct: 56  GSASATVQFWRGGHVERALVLRLIPLALAGSALGAYLVRFVDPNTFKTLVGFVILGVGAL 115

Query: 141 MLKRDRLYCERKFPDNYVKYIW-----GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           +L   R   E + P    + +        + G   G LG G G F   L    G ++ ++
Sbjct: 116 VLANKRFGLEDRSPGLTPRVLALTLPGTFIIGMYDGFLGPGTGTFAMFLFALAGFNLVRS 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++      A +  +  G  +                L +   + L   L  +++
Sbjct: 176 SGNARTINFATNLGAFIAFLIGGNMV------------WWIGLPMGVANALGATLGARMA 223

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
            + G  ++   + +I+   +  
Sbjct: 224 MLRGSAFVKWMYGLIVVLVAAR 245


>gi|118587476|ref|ZP_01544901.1| permease [Oenococcus oeni ATCC BAA-1163]
 gi|118432126|gb|EAV38867.1| permease [Oenococcus oeni ATCC BAA-1163]
          Length = 283

 Score = 66.6 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 95/278 (34%), Gaps = 50/278 (17%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + + I    L+G    + G+GGG+++ P+L   F       ++ +H A+  S+  +  
Sbjct: 4   TLLIVYISIGILAGVFGAVLGLGGGMIVTPILVLGF-------NLPIHYAIAASIIAVIG 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS  + + + +   +N+++         I  ++ ++++     S+LN  F    L  G  
Sbjct: 57  TSSGASVAYLKDDLLNIRVAMFLEIFTTIGALIGAVLVGIFKASWLNAFFGFLLLYQGFA 116

Query: 141 MLKRDRLYCERKF------------------------------PDNYVKYIWGMVTGFLS 170
           M ++                                              +     GF S
Sbjct: 117 MWQKMHSEKADTLALKDDTAARKLNLDSSYYDKLQGKEVTYHIQKVPFGALIMFGAGFAS 176

Query: 171 GALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G LG+G G F    M       +  ++ATS  +  + A  + L+  ++G           
Sbjct: 177 GLLGIGSGTFKVFAMDTVMQMPLKPSSATSNFMMGVTAAASALIYFFNGTIQP------- 229

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
                  V  I    I  + L +K+   +  K L   F
Sbjct: 230 -----LIVAPIAIGIIFGSTLGSKVMPYLPNKLLRGIF 262



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 7/125 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +    +  F +G  SGL G+G G   V  +    Q       + +  +  TS  ++ 
Sbjct: 159 IQKVPFGALIMFGAGFASGLLGIGSGTFKVFAMDTVMQ-------MPLKPSSATSNFMMG 211

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S + +  +GTI   I+      +   + + S ++ ++    L   F    +L G+
Sbjct: 212 VTAAASALIYFFNGTIQPLIVAPIAIGIIFGSTLGSKVMPYLPNKLLRGIFIPVVVLAGV 271

Query: 140 LMLKR 144
            ++ +
Sbjct: 272 QLVIK 276


>gi|291531587|emb|CBK97172.1| Predicted permeases [Eubacterium siraeum 70/3]
          Length = 258

 Score = 66.6 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 102/261 (39%), Gaps = 25/261 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            + ++A   +G  +G  G+    V+ P+L      +GI+     + A+G +L      S 
Sbjct: 8   AICLLAGIGAGLGTGFAGMSAAAVITPMLV---TFLGIEP----YTAVGIALASDVLASA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +S   + ++  +++K     +  + I TVV S + S V    +        LL+GI  + 
Sbjct: 61  VSAYTYGKNKNLDIKNGLVMMITVLIFTVVGSFVSSLVPSVAMGNFSVFMTLLLGIKFIV 120

Query: 144 RDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
           R  +  +        K       I G++ GF+ G +G GGG+   LL+    G  +  A 
Sbjct: 121 RPVMTTKADMSARSAKSVLIKSIICGIIVGFICGFIGAGGGMMMLLLLTSVMGYELKTAV 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            TS  +    A    +     G   + LP            ++ +  +++   +A K++ 
Sbjct: 181 GTSVFIMTFTALTGSVSHFAIGGLPDMLP-----------FILCIIFTLIFARIAAKIAN 229

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
               + L     +I+     V
Sbjct: 230 KASPETLNRVTGIILVILGIV 250


>gi|229581340|ref|YP_002839739.1| protein of unknown function DUF81 [Sulfolobus islandicus Y.N.15.51]
 gi|228012056|gb|ACP47817.1| protein of unknown function DUF81 [Sulfolobus islandicus Y.N.15.51]
          Length = 286

 Score = 66.6 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 98/292 (33%), Gaps = 52/292 (17%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +++  ++++ S LSG L  L G+GG   +VP+ +          ++ +  A G SL    
Sbjct: 5   IEFFVIVVLISALSGILGALTGLGGATFLVPIYTLYL-------NVPIAYASGASLISTI 57

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN----KAFAIFCL 135
            TS  +   + +    N+KI           ++  +L ++++    L       F I  L
Sbjct: 58  ATSSGAASAYIKDRITNVKIGMGLEIATTTGSIAGALTVAYIYAHHLEFIVYIVFGIVLL 117

Query: 136 LMGILMLKRDRLYCERKFPDNYVKY----------------------------IWGMVTG 167
               + L + +    +    ++                               I     G
Sbjct: 118 SQVYVQLDKSKFELPKPIKPDWTTRVFELYGKYYDTVLKREVEYHGVRWWLGEIIMFFAG 177

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           F+SG LG+G G    L M +     +  +T TS  +  + A     +    G+    L  
Sbjct: 178 FISGLLGIGSGALKVLGMDWAMNLPMKVSTTTSNFMIGVTAATGSSIYWIFGYIQPFLAA 237

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +                ++   + TK+   +  K +   F++I+       
Sbjct: 238 GT------------ALGVLIGAFIGTKILVRVTNKTIRYIFTVILIFLGIQM 277



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +  F +G +SGL G+G G + V  +  A        ++ M V+  TS  +I  T+ 
Sbjct: 167 WLGEIIMFFAGFISGLLGIGSGALKVLGMDWAM-------NLPMKVSTTTSNFMIGVTAA 219

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +   G I   +       + I   + + ++  V    +   F +  + +GI M+ 
Sbjct: 220 TGSSIYWIFGYIQPFLAAGTALGVLIGAFIGTKILVRVTNKTIRYIFTVILIFLGIQMIL 279

Query: 144 R 144
           R
Sbjct: 280 R 280


>gi|323497907|ref|ZP_08102916.1| hypothetical protein VISI1226_07692 [Vibrio sinaloensis DSM 21326]
 gi|323316952|gb|EGA69954.1| hypothetical protein VISI1226_07692 [Vibrio sinaloensis DSM 21326]
          Length = 260

 Score = 66.6 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 103/265 (38%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  ++ + ++ V +  +G +  + G GGGL+ +P L       G+  +     A+ T+  
Sbjct: 2   ELTLEILTILFVVATAAGFIDAMAG-GGGLLTLPALLAV----GVPPTQ----ALATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  S  +     R+G +N+K ++  I    I + + +  +  +D   L     +  + 
Sbjct: 53  QSSFGSFSASWYFVRNGIVNIKEMRLAIACTFIGSAIGAEAVQFIDAGILTSLIPVLLVA 112

Query: 137 MGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
           + +  L   +        K  +       G   GF  G  G G G IFT   +     S+
Sbjct: 113 ISLYFLLMPKAKEHSGNAKLSEAMFALSVGGGVGFYDGFFGPGTGSIFTVCFVALGHFSL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             ATA +  ++      ALL  I++G     LP W LG       L++     +   +  
Sbjct: 173 VDATARTKVLNFTSNIAALLFFIFAG-----LPIWELG-------LVMAVGGFIGARVGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           K+    G+K++     ++    +  
Sbjct: 221 KVVISKGQKWIRPLVIIMSMLMAAK 245


>gi|294795079|ref|ZP_06760214.1| putative membrane protein [Veillonella sp. 3_1_44]
 gi|294454441|gb|EFG22815.1| putative membrane protein [Veillonella sp. 3_1_44]
          Length = 264

 Score = 66.6 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 99/253 (39%), Gaps = 26/253 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ VA   +G +  + G GGGL+ VP +           ++   VA+G++     
Sbjct: 14  ILILVLLAVAGAFAGFVDSIVG-GGGLISVPAMLL--------TNLPPSVALGSNKLSSI 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  + +   R+  ++  +++  +    + +++ +L +  +   ++     I  + + +
Sbjct: 65  FGAGSASITFLRNHMVDFSLVRKLLPFTFVGSMLGTLAVVSLPPLYVKPIIIILLVCVTL 124

Query: 140 LMLKRDRLYCERKFPDNYVKYI-----WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            ++ +       +      K +     + +  G   G +G G G F  +  +F G     
Sbjct: 125 FVVFKKDWGEINRTSQVAGKALYICMAFALGIGIYDGFIGPGTGTFLIMGFIFTGFDFLH 184

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A +  ++      +LLV +Y            LG VN+   L      I+   L + L
Sbjct: 185 ASANAKILNFTSNLASLLVFLY------------LGHVNVKYGLATGAGQIIGAYLGSHL 232

Query: 255 SYMIGKKYLTIGF 267
           +   G   + + F
Sbjct: 233 AIAKGSSLVRVVF 245


>gi|46908578|ref|YP_014967.1| hypothetical protein LMOf2365_2378 [Listeria monocytogenes serotype
           4b str. F2365]
 gi|46881850|gb|AAT05144.1| putative membrane protein [Listeria monocytogenes serotype 4b str.
           F2365]
          Length = 282

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 86/258 (33%), Gaps = 48/258 (18%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+  F        I +  A+G S+  +  TS  S + + + G  N+++         I
Sbjct: 36  PALTLIF-------GIDIQYAIGASIISVIATSSGSAIAYIKDGITNLRVGMFLEIATTI 88

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR------------------------- 144
             +  + +   +  + L   F +  L     M+K+                         
Sbjct: 89  GAITGAFVSGLLSATALYIIFGLLLLYSAFNMIKKVGTEFPTNVKPDPLATKLNLHDSYY 148

Query: 145 ---DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA 200
               R   + +  +    +      G  SG LG+G G F  + + +F    +  ++ATS 
Sbjct: 149 DKSLRQTVDYQVANVPAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSATSN 208

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  + A  +  V ++ G     +               +    ++   L T++   +  
Sbjct: 209 LMMGVTAAASATVYLFQGDIQPAI------------AAPVAIGVLVGATLGTRIMQRLKS 256

Query: 261 KYLTIGFSMIMFTTSFVF 278
           K + I F  ++   +F  
Sbjct: 257 KVIRIIFIPVILYVAFQM 274



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  SGL G+G G   V         + +   + + V+  TS  ++  T+  S   +   
Sbjct: 173 AGIASGLLGIGSGAFKV-------MALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQ 225

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           G I   I       + +   + + ++  +    +   F    L +   M+ 
Sbjct: 226 GDIQPAIAAPVAIGVLVGATLGTRIMQRLKSKVIRIIFIPVILYVAFQMIL 276


>gi|330718301|ref|ZP_08312901.1| permease [Leuconostoc fallax KCTC 3537]
          Length = 291

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 81/251 (32%), Gaps = 43/251 (17%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            ++ I  ++ +H A+G S+  +  TS  + + + +   +N+++         I  +  +L
Sbjct: 41  PILVIGFNLPIHYAIGASIIAVIATSSGASIAYLKDDMLNLRMAMFLEIFTTIGALAGAL 100

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN-------------------- 156
           +       +LN  F I  +     M ++                                
Sbjct: 101 LAIFFKAIWLNFLFGILLVYQAYRMWRKLHSKKVDAPSTKEDHFAQKMQLNSSYFDKSTH 160

Query: 157 ----------YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSAL 205
                         +  +  G  SG LG+G G+F    M       +  ++ATS  +  +
Sbjct: 161 QQIDYKVENVAGGALAMIWAGIASGLLGIGSGMFKVFAMDTVMKMPLKPSSATSNLMMGV 220

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
            A  + LV  ++G             + +   L I    +L   +  +L   I  K L  
Sbjct: 221 TAATSALVYFFNGTIKAN--------IAVPIALGI----LLGATIGARLMPHIPAKRLRQ 268

Query: 266 GFSMIMFTTSF 276
            F  ++     
Sbjct: 269 LFIPVVGIAGL 279



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 56/131 (42%), Gaps = 11/131 (8%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV--AMGT 73
            D  V+ +    +A   +G  SGL G+G G+         F++  +D  + M +  +  T
Sbjct: 163 IDYKVENVAGGALAMIWAGIASGLLGIGSGM---------FKVFAMDTVMKMPLKPSSAT 213

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           S  ++  T+  S + +  +GTI   I       + +   + + ++ H+    L + F   
Sbjct: 214 SNLMMGVTAATSALVYFFNGTIKANIAVPIALGILLGATIGARLMPHIPAKRLRQLFIPV 273

Query: 134 CLLMGILMLKR 144
             + G+ +L +
Sbjct: 274 VGIAGLQLLLK 284


>gi|313617389|gb|EFR89792.1| permease [Listeria innocua FSL S4-378]
          Length = 282

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 86/258 (33%), Gaps = 48/258 (18%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+  F        I +  A+G S+  +  TS  S + + + G  N+++         I
Sbjct: 36  PALTLIF-------GIDIQYAIGASIISVIATSSGSAIAYIKDGITNLRVGMFLEIATTI 88

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR------------------------- 144
             +  + +   +  + L   F +  L     M+K+                         
Sbjct: 89  GAITGAFVSGLLSATALYIIFGLLLLYSAFNMIKKVGSEFPTNVKPDPLATKLNLHDSYY 148

Query: 145 ---DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA 200
               R   + +  +    +      G  SG LG+G G F  + + +F    +  ++ATS 
Sbjct: 149 DKSLRQTVDYQVANVPAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSATSN 208

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  + A  +  V ++ G     +               +    ++   L T++   +  
Sbjct: 209 LMMGVTAAASATVYLFQGDIQPAI------------AAPVAIGVLVGATLGTRIMQRLKS 256

Query: 261 KYLTIGFSMIMFTTSFVF 278
           K + I F  ++   +F  
Sbjct: 257 KVIRIIFIPVILYVAFQM 274



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  SGL G+G G   V         + +   + + V+  TS  ++  T+  S   +   
Sbjct: 173 AGIASGLLGIGSGAFKV-------MALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQ 225

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           G I   I       + +   + + ++  +    +   F    L +   M+ 
Sbjct: 226 GDIQPAIAAPVAIGVLVGATLGTRIMQRLKSKVIRIIFIPVILYVAFQMIL 276


>gi|150377472|ref|YP_001314067.1| hypothetical protein Smed_5363 [Sinorhizobium medicae WSM419]
 gi|150032019|gb|ABR64134.1| protein of unknown function DUF81 [Sinorhizobium medicae WSM419]
          Length = 257

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 87/256 (33%), Gaps = 9/256 (3%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++   L  +  FL+  + G  G+  G++     S     +G+  +     A    L    
Sbjct: 1   MEEFLLFALVGFLAQAIDGALGMAYGVIS----STVLLALGVPPAQASASAHAAEL---- 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+  S   H  H  I+ K+    +    +  ++ + +++  D   +      +  ++G 
Sbjct: 53  FTTAASGSAHLYHRNIDWKLFWRLVPFGVVGGMLGAFVVTSFDGDQVKPFVTAYLAVIGA 112

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            +L R       K     +    G V GFL  A G G G      +L  G        T 
Sbjct: 113 WLLYRSFHRIPTKPVKLRIVAPLGAVAGFLDAAGGGGWGPVATTGLLGAGGQPRFVIGTV 172

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +    LIA    L  + +    +           + ++  ++   ++  PLA      + 
Sbjct: 173 SASEFLIALSVSLSFLATILTGHWEQAGEFR-DYLASIGGLIIGGVMAAPLAGWAVKALR 231

Query: 260 KKYLTIGFSMIMFTTS 275
           +K L      ++   +
Sbjct: 232 EKTLLRLVGSMIVLLA 247


>gi|332292374|ref|YP_004430983.1| protein of unknown function DUF81 [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332170460|gb|AEE19715.1| protein of unknown function DUF81 [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 270

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 8/120 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI++   + G ++G+ G GGG +++P L           ++ M VA+GTSL +IA  S+M
Sbjct: 151 LILIEGLIVGGITGMIGAGGGFLIIPALVIL-------ANVEMKVAVGTSLIIIAFKSLM 203

Query: 85  SFM-EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            F         I+   L  +  +  +   + S + + +D   L + F  F  +M I +  
Sbjct: 204 GFFLGDALTMDIDWLFLSIFTGISFVGIFIGSYLSNFIDGDKLKRGFGYFIFVMAIFIFY 263



 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 91/249 (36%), Gaps = 37/249 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VPVL+  F       S+   VA   SL ++  ++++   +    G ++ +    +   
Sbjct: 29  LAVPVLAYLF-------SVNEKVATAYSLFIVGASALVGGFKQHLKGYVDWRTAIVFGLP 81

Query: 107 LPIT-TVVTSLMISHVDKSFLN-------------KAFAIFCLLMGILMLKRDRLYCERK 152
             +  TVV   ++  +    L                FA+  +     MLK+ +   ++ 
Sbjct: 82  AIVGVTVVRHYVVPALPDILLTTGDFEFTRRMAMFGLFAVLMIPAAFSMLKKRKDNKQKG 141

Query: 153 ----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIA 207
                 +  +  I G++ G ++G +G GGG      L++     +  A  TS     +IA
Sbjct: 142 DGTVTYNYPLILIEGLIVGGITGMIGAGGGFLIIPALVILANVEMKVAVGTSL---IIIA 198

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F +L+                + ++ +     I  + I    + + LS  I    L  GF
Sbjct: 199 FKSLMGFFLG-----DALTMDIDWLFLSIFTGISFVGIF---IGSYLSNFIDGDKLKRGF 250

Query: 268 SMIMFTTSF 276
              +F  + 
Sbjct: 251 GYFIFVMAI 259


>gi|291301252|ref|YP_003512530.1| hypothetical protein Snas_3780 [Stackebrandtia nassauensis DSM
           44728]
 gi|290570472|gb|ADD43437.1| protein of unknown function DUF81 [Stackebrandtia nassauensis DSM
           44728]
          Length = 332

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 92/272 (33%), Gaps = 34/272 (12%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L+IVA  L G   GL G+GGG +M P++   F   G++ +     A+G+ L    
Sbjct: 1   MDISLLVIVAGVLVGLSVGLTGMGGGALMTPIMVLVF---GVNPTA----AVGSDLTASV 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-----DKSFLNKAFAIFC 134
               +  + H R GT+   +++  +          + +IS +      +  L        
Sbjct: 54  AMKPVGAVVHHRAGTVRWDLVRWLLPTAIPAGFAGAWLISLLGDGKAVQDGLKLIIGAAL 113

Query: 135 LLMGILMLKRDRLY----------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
           LL  + M  R  L             R  P   +             ++G G  I   L+
Sbjct: 114 LLAVVGMFARIILSRRRGTATTDGPTRIKPVPALLIGVVGGLIVGVTSVGSGSLIIVLLM 173

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +        +   T    +  +   A L     G     L     G V +GA+  I    
Sbjct: 174 LTHPRLRANELVGTDLVQAIPLVASAALGHWIFGDTQLAL----AGTVLLGAIPGIY--- 226

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                +  KLS    +  L    ++++  +  
Sbjct: 227 -----VGAKLSARAPESILRWALAVLLLGSGM 253


>gi|330952253|gb|EGH52513.1| hypothetical protein PSYCIT7_12954 [Pseudomonas syringae Cit 7]
          Length = 270

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 51/284 (17%), Positives = 101/284 (35%), Gaps = 45/284 (15%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++  L +    + G +  L G GGG++ VP+L     L  ++ +    +A+G + G+ A 
Sbjct: 3   EHQLLGVGLGTIIGMVLALTGAGGGILAVPLLVFGLGLSIVEAAPVGLLAVGLAAGIGAV 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +       R G +  +       +  +   +   +   +  + L   F++  L     
Sbjct: 63  LGL-------RQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACGR 115

Query: 141 MLKRDRLYCER-----------------------KFPDNYVKYIWGMVTGFLSGALGVGG 177
           M  R                                P      + G+ +G LSG  GVGG
Sbjct: 116 MFIRASRELRHGKPAPRAEILPCVLNPLQGRLRWTMPCLRALTLTGVGSGLLSGLWGVGG 175

Query: 178 GIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSG-WGLNGLPPWSLGFVNIG 235
           G      +  Y    +    ATS  V AL++  +++    SG        P++LG     
Sbjct: 176 GFVIIPALTRYSDLDMKSVVATSLAVIALVSTGSVITASLSGVMHWAVGAPFALG----- 230

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           AV+ ++        +  +++  +    L   F++     +F+ A
Sbjct: 231 AVVGLI--------IGRQVARYLAGPRLQQLFAVCGIVAAFMLA 266



 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 7/121 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +    SG LSGL+GVGGG V++P L++          + M   + TSL VIA  S  S
Sbjct: 157 LTLTGVGSGLLSGLWGVGGGFVIIPALTRY-------SDLDMKSVVATSLAVIALVSTGS 209

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            +     G ++  +   +     +  ++   +  ++    L + FA+  ++   ++    
Sbjct: 210 VITASLSGVMHWAVGAPFALGAVVGLIIGRQVARYLAGPRLQQLFAVCGIVAAFMLALSV 269

Query: 146 R 146
           R
Sbjct: 270 R 270


>gi|294499777|ref|YP_003563477.1| hypothetical protein BMQ_3021 [Bacillus megaterium QM B1551]
 gi|294349714|gb|ADE70043.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
          Length = 295

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 89/263 (33%), Gaps = 26/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +    +  FL+  + G  G+  G+     L   F +     S  +H+A          T+
Sbjct: 4   LITFALIGFLAQLIDGSLGMAYGVTST-TLLLTFGIAPAVASASVHLAE-------VVTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H + G ++  ++   I    I   V +  +S++    +    + F LL+G+ +L
Sbjct: 56  AASGVSHIKFGNVDKSMVLKLIIPGSIGAFVGACFLSNLPGDAVRPYVSTFLLLLGVYVL 115

Query: 143 ------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKA 195
                  +       K          G++ GF     G G G     ++L   G +  K 
Sbjct: 116 FRFLFTFKTNEEKSTKPLSTKQSIPLGLIAGFADATGGGGWGPIATPVLLAKKGTTARKV 175

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             T       IA  A L  + S GW            VN   V  ++   I+  P+A   
Sbjct: 176 VGTVDTSEFAIAVSATLGFLISLGWEQ----------VNWFWVGALMIGGIIAAPIAAWF 225

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             +I    L       +  T+  
Sbjct: 226 VRIIPAHLLGSLVGGFIILTNAR 248


>gi|299821143|ref|ZP_07053031.1| permease [Listeria grayi DSM 20601]
 gi|299816808|gb|EFI84044.1| permease [Listeria grayi DSM 20601]
          Length = 248

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 93/221 (42%), Gaps = 19/221 (8%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           +I +HVA+GTSL  +  T++   + H R   I+ KI         I  ++ S  + ++ +
Sbjct: 34  NIPIHVAIGTSLLGLISTALFGSISHTREKNIDFKIGSFLGLSGGIGALIDSFCVKYIPE 93

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI------WGMVTGFLSGALGVGG 177
           S L+   +I  +   I++  R  +    K  +  +K I      +G++ G +SG  G+  
Sbjct: 94  SNLSLLTSIALISSSIILWIRISIMTNGKEKNLRLKSIILRALFFGIILGSISGLFGIAS 153

Query: 178 GIFT-NLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
             F    L+L +G  + K+  T+  V   I+    +  I +            G++++  
Sbjct: 154 SAFIQITLLLAFGLDLRKSAGTTMLVILPISLIGGIGYIAN------------GYIDVLL 201

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           ++ ++  +   T +  K +  +    L I    +    + +
Sbjct: 202 LIKVILGTSFGTYIGAKFTNRLSPLILKIAMISVPLIGAII 242



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 52/122 (42%), Gaps = 7/122 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I   +    + G++SGLFG+     +   L  AF        + +  + GT++ VI P
Sbjct: 130 SIILRALFFGIILGSISGLFGIASSAFIQITLLLAF-------GLDLRKSAGTTMLVILP 182

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S++  + +  +G I++ +L   I      T + +   + +    L  A     L+  I+
Sbjct: 183 ISLIGGIGYIANGYIDVLLLIKVILGTSFGTYIGAKFTNRLSPLILKIAMISVPLIGAII 242

Query: 141 ML 142
           ++
Sbjct: 243 LI 244


>gi|257468228|ref|ZP_05632324.1| transporter [Fusobacterium ulcerans ATCC 49185]
          Length = 276

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 102/270 (37%), Gaps = 27/270 (10%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  L +   +     + +A F +  +  + G GGGL+ +P              +  HVA
Sbjct: 1   MFGLMEGMDLSGFIFLGIACFFAAFIDAIAG-GGGLISLPAFLA--------SGLPAHVA 51

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+      +++ S  +  + G IN +++K       I  V+    +  +D  +L    
Sbjct: 52  LGTNKVAACCSTIASSAKFAQSGKINWQLMKKLAAFSFIGAVLGVKTVVMIDSKYLYPIA 111

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVGGGIFTNLLM 185
            +  +++ I  L+   L  E +F     +      I     GF  G  G G G F    M
Sbjct: 112 IVLLVMVLIYTLRNKNLGEENRFEGLTGQNVKWGIIMAFALGFYDGFFGPGTGSFLIFAM 171

Query: 186 LF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +  +      A+  +  ++      ++++ +  G          + +V   ++  I+   
Sbjct: 172 IRIFKIDFTNASGNAKILNLSSNVASVIMFVSMG---------KVAYVYSFSMAAIM--- 219

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           ++   +  K++   G K++   F ++    
Sbjct: 220 VVGAIIGAKMAVTRGTKFIKPMFLIVTTVV 249


>gi|227828357|ref|YP_002830137.1| hypothetical protein M1425_2099 [Sulfolobus islandicus M.14.25]
 gi|229579999|ref|YP_002838399.1| protein of unknown function DUF81 [Sulfolobus islandicus Y.G.57.14]
 gi|229585587|ref|YP_002844089.1| hypothetical protein M1627_2181 [Sulfolobus islandicus M.16.27]
 gi|227460153|gb|ACP38839.1| protein of unknown function DUF81 [Sulfolobus islandicus M.14.25]
 gi|228010715|gb|ACP46477.1| protein of unknown function DUF81 [Sulfolobus islandicus Y.G.57.14]
 gi|228020637|gb|ACP56044.1| protein of unknown function DUF81 [Sulfolobus islandicus M.16.27]
 gi|323475432|gb|ADX86038.1| conserved hypothetical protein [Sulfolobus islandicus REY15A]
          Length = 286

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 98/292 (33%), Gaps = 52/292 (17%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +++  ++++ S LSG L  L G+GG   +VP+ +          ++ +  A G SL    
Sbjct: 5   IEFFVIVVLISALSGILGALTGLGGATFLVPIYTLYL-------NVPIAYASGASLISTI 57

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN----KAFAIFCL 135
            TS  +   + +    N+KI           ++  +L ++++    L       F I  L
Sbjct: 58  ATSSGAASAYIKDRITNVKIGMGLEIATTTGSIAGALTVAYIYAHHLEFIVYIVFGIVLL 117

Query: 136 LMGILMLKRDRLYCERKFPDNYVKY----------------------------IWGMVTG 167
               + L + +    +    ++                               I     G
Sbjct: 118 SQVYVQLAKSKFELPKPIKPDWTTRVFELYGKYYDTVLKREVEYHGVRWWLGEIIMFFAG 177

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           F+SG LG+G G    L M +     +  +T TS  +  + A     +    G+    L  
Sbjct: 178 FISGLLGIGSGALKVLGMDWAMNLPMKVSTTTSNFMIGVTAATGSSIYWIFGYIQPFLAA 237

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +                ++   + TK+   +  K +   F++I+       
Sbjct: 238 GT------------ALGVLIGAFIGTKILVRVTNKTIRYIFTVILIFLGIQM 277



 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +  F +G +SGL G+G G + V  +  A        ++ M V+  TS  +I  T+ 
Sbjct: 167 WLGEIIMFFAGFISGLLGIGSGALKVLGMDWAM-------NLPMKVSTTTSNFMIGVTAA 219

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +   G I   +       + I   + + ++  V    +   F +  + +GI M+ 
Sbjct: 220 TGSSIYWIFGYIQPFLAAGTALGVLIGAFIGTKILVRVTNKTIRYIFTVILIFLGIQMIL 279

Query: 144 R 144
           R
Sbjct: 280 R 280


>gi|313673676|ref|YP_004051787.1| hypothetical protein Calni_1718 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940432|gb|ADR19624.1| protein of unknown function DUF81 [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 273

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 52/234 (22%), Positives = 85/234 (36%), Gaps = 34/234 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L++    ++G L  L G+GGG ++VP+L              MH A+   L  I  TS
Sbjct: 3   IVLLVAVGIIAGFLGALLGIGGGSIIVPILVTFLHY-------PMHNAVAIGLLTIVATS 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V     +   G IN+++     F+  I ++V S + + +D + L   + I   ++ ++ +
Sbjct: 56  VSVAHVNILKGLINLELSLVLEFLTVIASIVGSFIGNKLDNNTLQIIYGIILSIISLIYI 115

Query: 143 --------------------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
                                        + Y            I   V G  SG LG+G
Sbjct: 116 KESIRPKIEINIITDKNNFFYDEYYDFDLKKYVGYSPIKIVKTMIVSTVAGAFSGMLGIG 175

Query: 177 GGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           GG+F    M       I  A ATS  +  L A    +  I  G        + +
Sbjct: 176 GGVFKVPAMNLLSKIPIKVAIATSNYMIGLTAASGSIPYIIHGKISPSASIYMI 229



 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 9/143 (6%)

Query: 2   YDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI 61
           YD  Y+F L  ++    +   I   ++ S ++G  SG+ G+GGG+  VP ++        
Sbjct: 136 YDEYYDFDLKKYVGYSPI--KIVKTMIVSTVAGAFSGMLGIGGGVFKVPAMNLL------ 187

Query: 62  DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV 121
              I + VA+ TS  +I  T+    + +  HG I+       I  +   + +     + +
Sbjct: 188 -SKIPIKVAIATSNYMIGLTAASGSIPYIIHGKISPSASIYMIVGVIFGSKIALTKFNKI 246

Query: 122 DKSFLNKAFAIFCLLMGILMLKR 144
               L   FA+F + + + ML +
Sbjct: 247 KDKKLKILFALFLIFVSLNMLYK 269


>gi|283832241|ref|ZP_06351982.1| inner membrane protein YfcA [Citrobacter youngae ATCC 29220]
 gi|291071882|gb|EFE09991.1| inner membrane protein YfcA [Citrobacter youngae ATCC 29220]
          Length = 269

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 98/237 (41%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  L G GGGL+ +P L       G+  +     A+ T+       
Sbjct: 14  LLAVLFFVAMLAGFIDSLAG-GGGLLTIPALM----AAGMPPAH----ALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S +   R G +N+   K  IF+  I ++  +L++ HV    L +   +  + +G+  
Sbjct: 65  SISSSLYFIRQGVVNLADQKLNIFMTFIGSMSGALLVQHVQSDILRQILPVLVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   ++  E   R+        + G   GF  G  G   G F  L  ++  G ++ K+TA
Sbjct: 125 LLMPKVGEEDRQRRLHGLPFALVAGGCVGFYDGFFGPAAGSFYALCFVMLCGYNLAKSTA 184

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++A      LL+         G   W+ GFV       +L    +   + ++L
Sbjct: 185 HAKVLNATSNIGGLLLFALG-----GKVIWATGFV-------MLIGQFIGARMGSRL 229


>gi|46198791|ref|YP_004458.1| putative permease [Thermus thermophilus HB27]
 gi|46196414|gb|AAS80831.1| putative permease [Thermus thermophilus HB27]
          Length = 250

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 87/228 (38%), Gaps = 15/228 (6%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL                 A+  SL ++   +++  + +   G ++ + +  +     
Sbjct: 28  VPVLVYLL-------GEPPKQAIAESLLIVGGIALLGAVPYALRGLVDFRNVLFFGLPGM 80

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
             T + + +   V        FA+  LL    M +   L  +      +   + G+  G 
Sbjct: 81  AGTYLGAWLSRFVSGQVQLLTFALVMLLAAYFMARPLPLKRQEGGRTPWKIVLEGLFVGA 140

Query: 169 LSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           L+G +GVGGG      ++   G  ++ A  TS  + A+ +F      ++       LP  
Sbjct: 141 LTGFVGVGGGFLIVPALVLLGGLPMHLAVGTSLLIIAMKSFAGFYKYLHL------LPAL 194

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            L  VN     + + +  L + L  +++  + ++ L  GF++ +    
Sbjct: 195 GL-SVNYQVAGLFVLVGFLGSLLGGRVAVRLPQESLKRGFALFLVAMG 241



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 63/125 (50%), Gaps = 12/125 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I++     G L+G  GVGGG ++VP L            + MH+A+GTSL +IA  S   
Sbjct: 131 IVLEGLFVGALTGFVGVGGGFLIVPALVLL-------GGLPMHLAVGTSLLIIAMKSFAG 183

Query: 86  FMEHRRH-----GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           F ++         ++N ++   ++ V  + +++   +   + +  L + FA+F + MG+ 
Sbjct: 184 FYKYLHLLPALGLSVNYQVAGLFVLVGFLGSLLGGRVAVRLPQESLKRGFALFLVAMGVF 243

Query: 141 MLKRD 145
           ++ ++
Sbjct: 244 IVAQN 248


>gi|86153732|ref|ZP_01071935.1| putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|85842693|gb|EAQ59905.1| putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 261

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 70/185 (37%), Gaps = 13/185 (7%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           LFG+GGG+++VP +               H A+G S+  +   +V     + +   +N+K
Sbjct: 21  LFGIGGGMIIVPSMFAL--------GASAHHAIGISVLQMIFAAVFGSYINYKKKNLNLK 72

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD--- 155
                 F   I    + +++  +    L   F     +  I      +    +       
Sbjct: 73  DGIMIGFGGLIGASFSGMLLKALSDVTLTSVFLAVSCIFFIKYAFGIKENIVQNQRSVWV 132

Query: 156 -NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
            N + +I G  TG  + +LG+GGG+    ++ ++ G    K  + S       +   ++ 
Sbjct: 133 KNVILFIAGAFTGIFAISLGIGGGLLIAPILAYFLGYDSKKVVSLSLFFVIFASVSGIIS 192

Query: 214 RIYSG 218
              SG
Sbjct: 193 FSNSG 197


>gi|302872603|ref|YP_003841239.1| hypothetical protein COB47_1988 [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302575462|gb|ADL43253.1| protein of unknown function DUF81 [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 276

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 56/286 (19%), Positives = 106/286 (37%), Gaps = 51/286 (17%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  I+  S ++G +  L G+GGGL+++P LS  F+         MH A    L  +  T
Sbjct: 1   MIVQILAVSIIAGFIGSLLGIGGGLIIIPFLSIVFKFN-------MHQAAAAGLVSVIAT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  +     +    +++I         I  V+ +++   +    L+  F I  L    LM
Sbjct: 54  SSGAASAFVKDRLTHLRIGMFLQLATVIGGVLGAILSGILPTKILSLIFGILLLYNSFLM 113

Query: 142 LKRDRLYCERKFPDNYVK-------------------------------YIWGMVTGFLS 170
           +K  +   + +     +                                ++   + G LS
Sbjct: 114 IKNRKSDEKIQPATLQISKWSRKLKLYGSYLDKIQNKQIEYSAQNITGGFLMMTLAGILS 173

Query: 171 GALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G LG+G GIF  L +          +TATS  +  + A  ++ + I  G  +  L     
Sbjct: 174 GLLGIGSGIFKVLALDTIMKLPFKVSTATSNFMMGVTALASISIYIARGDIVFNL----- 228

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                     +    ++ + +  ++   I  +YL I F++I+  T+
Sbjct: 229 -------CGAVAVGVLIGSTIGARVMPYIKSRYLKIAFALILIYTA 267



 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 51/113 (45%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+G LSGL G+G G+  V  L    +L          V+  TS  ++  T++ S   +  
Sbjct: 168 LAGILSGLLGIGSGIFKVLALDTIMKL-------PFKVSTATSNFMMGVTALASISIYIA 220

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G I   +       + I + + + ++ ++   +L  AFA+  +   + M+++
Sbjct: 221 RGDIVFNLCGAVAVGVLIGSTIGARVMPYIKSRYLKIAFALILIYTAVEMIRK 273


>gi|295705165|ref|YP_003598240.1| hypothetical protein BMD_3050 [Bacillus megaterium DSM 319]
 gi|294802824|gb|ADF39890.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 295

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 89/263 (33%), Gaps = 26/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +    +  FL+  + G  G+  G+     L   F +     S  +H+A          T+
Sbjct: 4   LITFALIGFLAQLIDGSLGMAYGVTST-TLLLTFGIAPAVASASVHLAE-------VVTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H + G ++  ++   I    I   V +  +S++    +    + F LL+G+ +L
Sbjct: 56  AASGVSHIKFGNVDKSMVLKLIIPGSIGAFVGACFLSNLPGEAVRPYVSTFLLLLGVYVL 115

Query: 143 ------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKA 195
                  +       K          G++ GF     G G G     ++L   G +  K 
Sbjct: 116 FRFLFTFKTNEEKSTKPLSTKQSIPLGLIAGFADATGGGGWGPIATPVLLAKKGTTARKV 175

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             T       IA  A L  + S GW            VN   V  ++   I+  P+A   
Sbjct: 176 VGTVDTSEFAIAVSATLGFLISLGWEQ----------VNWFWVGALMIGGIIAAPIAAWF 225

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             +I    L       +  T+  
Sbjct: 226 VRIIPAHLLGSLVGGFIILTNAR 248


>gi|20093581|ref|NP_613428.1| permease [Methanopyrus kandleri AV19]
 gi|19886437|gb|AAM01358.1| Predicted permease [Methanopyrus kandleri AV19]
          Length = 263

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 87/264 (32%), Gaps = 27/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++   F++G L G+ G GG ++M+P+L    +         +  A+ T++  +  T+
Sbjct: 9   VLELLGTGFIAGYLGGIIGTGGCVLMLPMLVFLLKY-------PIPEAIATTVFAVVWTA 61

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--DKSFLNKAFAIFCLLMGIL 140
               M H + G I+ +     +    I  ++ S++ + +      L        L   + 
Sbjct: 62  TFGTMSHAKLGNIDYETSAIVLAAGAIGALLGSVIFALIMKHTGALQVILGAAFLYAAVR 121

Query: 141 MLKR-DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG-----IFTNLLMLFYGASIYK 194
           M+    +     +  +   K       GF  G L    G           +    A ++ 
Sbjct: 122 MIYEWIKKIPGSEADEIPGKPSSKAAIGFGIGILTGILGLGGGYALVPSFIYLLDAPVHL 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A  TS      +A  +   ++  G                    ++   +I    L  K 
Sbjct: 182 AVGTSMISMIPMATVSAAYKMAQGLTDLVG------------GTLLGLGTIAGVKLGAKT 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
           +  I    +   F ++    S  F
Sbjct: 230 TQKIKPWTIKGIFGVVFLYISLKF 253



 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 28/92 (30%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                         +H+A+GTS+  + P + +S       G  ++               
Sbjct: 165 YALVPSFIYLLDAPVHLAVGTSMISMIPMATVSAAYKMAQGLTDLVGGTLLGLGTIAGVK 224

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +     +    +   F +  L + +  + +
Sbjct: 225 LGAKTTQKIKPWTIKGIFGVVFLYISLKFILQ 256


>gi|327438407|dbj|BAK14772.1| predicted permease [Solibacillus silvestris StLB046]
          Length = 256

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 99/255 (38%), Gaps = 26/255 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++I   FL+  +  + G GGGL+ +P L  A         +    A+ T+      
Sbjct: 8   QLVIILICFGFLAAFIDSVVG-GGGLISLPALMFA--------GLSPSAAVATNKLAGTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S+ S +   R G +++K +  +   + I++++ + ++  +D + L     I    + + 
Sbjct: 59  GSLTSTITFYRSGKLDIKSVMKYFPWVFISSMIGAWIVHLLDPNLLKPLMLIMLAAVAVY 118

Query: 141 MLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +                  + ++   + GF  G LG G G F     L  G    KA
Sbjct: 119 TIFKKDWGSISAVKSLSKTKYILFFLVISLIGFYDGFLGPGTGSFLIFAFLMVGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
              +  ++      ALL+ IY            LG +N    LI+    I+   + ++ +
Sbjct: 179 AGNAKLLNFGSNIGALLMFIY------------LGQINYTYGLIMGAAQIVGAIVGSRFA 226

Query: 256 YMIGKKYLTIGFSMI 270
              G  Y+ + F ++
Sbjct: 227 IKRGSGYVRVLFIIV 241


>gi|307594454|ref|YP_003900771.1| hypothetical protein Vdis_0313 [Vulcanisaeta distributa DSM 14429]
 gi|307549655|gb|ADN49720.1| protein of unknown function DUF81 [Vulcanisaeta distributa DSM
           14429]
          Length = 279

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 98/274 (35%), Gaps = 33/274 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L IV+  L G   GL G GG ++ VP+      L  I D    H+A+GT+   +   + 
Sbjct: 11  ALSIVSGVLVGFSLGLIGGGGSILAVPLFLYFVGLDTIPD--AAHIAIGTTALAVGLNAY 68

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++   H R   +  K+   +  V  + +++ + +      + L   FAI  +++G+ M  
Sbjct: 69  INSYMHLRKKNVAPKVGGIFAGVGLVGSLIGAYLGHITPGTDLLTYFAIAMIVLGVYMAI 128

Query: 144 RDRLY------------------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
           R                                  ++G + G +SG  G+GGG      +
Sbjct: 129 RRESTQAGTINEVNHVLDAFNKCPRLTISTILKVAVFGFIVGLVSGYFGIGGGFLIVPSL 188

Query: 186 LFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +F  G  I +A  TS          +     + G   + L   +L +V  G        S
Sbjct: 189 MFSAGLCITRAIGTSLISVGTFGVASGAEYWFYG---DVLILIALLYVAGGIAGGYAGTS 245

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           I         +    K+ L I + +I+       
Sbjct: 246 I---------AVKAPKRTLRIAYGIIIVLVGIYM 270



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 7/125 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I  + V  F+ G +SG FG+GGG ++VP L            +C+  A+GTSL  + 
Sbjct: 156 ISTILKVAVFGFIVGLVSGYFGIGGGFLIVPSLMF-------SAGLCITRAIGTSLISVG 208

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              V S  E+  +G + + I   ++          + +     K  L  A+ I  +L+GI
Sbjct: 209 TFGVASGAEYWFYGDVLILIALLYVAGGIAGGYAGTSIAVKAPKRTLRIAYGIIIVLVGI 268

Query: 140 LMLKR 144
            ML R
Sbjct: 269 YMLMR 273


>gi|242309104|ref|ZP_04808259.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
 gi|239524528|gb|EEQ64394.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
          Length = 234

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 80/216 (37%), Gaps = 16/216 (7%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           + +A+G S+  +  +S+     + +   ++ K          I    + +++ +V  + L
Sbjct: 24  IKIAIGISIMQMIFSSIYGSYVNYKKKNLDFKDGVFVGIGGLIGASFSGVIVDNVPSNIL 83

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKF----PDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
              F  F +   I   + +    ER+              G V G  + +LG+GGG+   
Sbjct: 84  EIVFTCFIVYSIIKFFRANAYGGERRIDEGRNSALFLIAGGCVVGIFAISLGIGGGMMLA 143

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            L+ +Y          S+     I+   ++    SG+    L     G+V+     ++  
Sbjct: 144 PLLAYY-------LGYSSKKIVPISLFFVIFSSVSGFTSLALH----GYVDYKQGFLVGI 192

Query: 243 ISILITPLATKLSYMIGKKYLTIG-FSMIMFTTSFV 277
            S++   +   +  +I  K       +M +F  + +
Sbjct: 193 ASLIGVRIGIWILSIIDAKKHKYALLAMYVFVLAIM 228



 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 7/124 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +    +I    + G  +   G+GGG+++ P+L+     +G      + +    SL  +  
Sbjct: 115 NSALFLIAGGCVVGIFAISLGIGGGMMLAPLLAY---YLGYSSKKIVPI----SLFFVIF 167

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +SV  F     HG ++ K          I   +   ++S +D      A     + +  +
Sbjct: 168 SSVSGFTSLALHGYVDYKQGFLVGIASLIGVRIGIWILSIIDAKKHKYALLAMYVFVLAI 227

Query: 141 MLKR 144
           ML++
Sbjct: 228 MLEK 231


>gi|225375393|ref|ZP_03752614.1| hypothetical protein ROSEINA2194_01018 [Roseburia inulinivorans DSM
           16841]
 gi|225212764|gb|EEG95118.1| hypothetical protein ROSEINA2194_01018 [Roseburia inulinivorans DSM
           16841]
          Length = 255

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 89/247 (36%), Gaps = 25/247 (10%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           +G  G+    V+ P+L     +           A+G +L      S +S   + ++  ++
Sbjct: 18  TGFAGMSAAAVISPMLIAFLHMDAYQ-------AIGIALASDVLASAVSAYTYGKNKNLD 70

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN 156
           +K     +F + I T V S + S +  + +        +L+GI  + +  +  +      
Sbjct: 71  IKNGLVMMFTVMIFTFVASYLASFIPSTTMGGFSTFMTMLLGIKFIVKPVMTTKETMAAT 130

Query: 157 YVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFP 209
             K       I G V G + G +G GGG+   L++    G  +  A  TS  +    A  
Sbjct: 131 DPKKRIIQSIICGTVIGCICGFVGAGGGMMMLLILTSVLGYELKTAVGTSVFIMTFTALT 190

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             L     G   +           +  +++ +  +++   +A  L+     K L     +
Sbjct: 191 GALSHFAIGGTPD-----------LVVLILCIVSTLIFARVAAVLANKAPAKLLNQATGV 239

Query: 270 IMFTTSF 276
           I+     
Sbjct: 240 ILVILGA 246


>gi|148826549|ref|YP_001291302.1| permease [Haemophilus influenzae PittEE]
 gi|148827994|ref|YP_001292747.1| 50S ribosomal protein L17 [Haemophilus influenzae PittGG]
 gi|229845857|ref|ZP_04465969.1| 50S ribosomal protein L17 [Haemophilus influenzae 7P49H1]
 gi|148716709|gb|ABQ98919.1| predicted permease [Haemophilus influenzae PittEE]
 gi|148719236|gb|ABR00364.1| 50S ribosomal protein L17 [Haemophilus influenzae PittGG]
 gi|229810861|gb|EEP46578.1| 50S ribosomal protein L17 [Haemophilus influenzae 7P49H1]
 gi|309973702|gb|ADO96903.1| Hypothetical protein R2846_1521 [Haemophilus influenzae R2846]
          Length = 269

 Score = 66.6 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 96/264 (36%), Gaps = 12/264 (4%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I ++++    +  +S +FG+GGG++MVP+L   F        + + V   TSL ++  
Sbjct: 4   STIFILLICGICTNMVSAIFGIGGGVLMVPILRTLF------PELPIQVISATSLTIVMC 57

Query: 81  TSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           T++++ +   +    I+   +  W   + I   +   +  +   + ++  F +    + I
Sbjct: 58  TALINLLFFYKQKIKIDYINMILWSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAI 117

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMV-----TGFLSGALGVGGGIFTNLLMLFYGASIYK 194
                        F  + ++   G +               GG I   L+    G    +
Sbjct: 118 KTFLNRSRIQIEVFNMSPIERAKGSISFCGGGLIAGITGIGGGSILAPLVGQLKGVKTQQ 177

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
               +  +  +     L   +   +  +      LG+VN   V ++   S  ++  + KL
Sbjct: 178 IAVYTNYMMIIGGIGNLYGYLTRAFPYDISLSGQLGYVNFFVVGVVTLGSFGMSFFSMKL 237

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
             ++         ++I+F  +   
Sbjct: 238 RGLMNPALTRKLLAIILFCIAAYM 261


>gi|162449009|ref|YP_001611376.1| hypothetical protein sce0739 [Sorangium cellulosum 'So ce 56']
 gi|161159591|emb|CAN90896.1| hypothetical protein sce0739 [Sorangium cellulosum 'So ce 56']
          Length = 296

 Score = 66.2 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 92/260 (35%), Gaps = 26/260 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI     + G +S + G G  ++ V +L+           + +H A+ TSL  +   S++
Sbjct: 11  LIAALGLIIGIVSAILGAGPSILTVLLLTSV-------AGLELHRAVATSLVAVMLMSLV 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + + +     +  +    +         ++  +   + +  L   F +  ++  + ML  
Sbjct: 64  AVVPYAMENAVVWRYAFTFGLASITGAYLSGHIAGVIPEHILRVIFFMATVVASVAMLWD 123

Query: 145 DRLYCERKFPDN------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATA 197
                  +           V    G++ G L+G +G+GGG     L++ + G  ++ A  
Sbjct: 124 RPPPPLDQGRKRSSWRPMAVLAAGGILVGCLTGLVGLGGGFAIVPLLVMFTGTPVHAAIG 183

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS  V A+     L   +         PP     V+      +       +    +L+  
Sbjct: 184 TSILVIAMNTMAGLAGHL-------PHPP-----VDWPLAASLSITECAGSLAGARLARH 231

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           I        F+ +M   S V
Sbjct: 232 ISAAVRRWAFAGLMLAVSAV 251



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 36/92 (39%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                L+ +     +H A+GTS+ VIA  ++     H  H  ++  +           ++
Sbjct: 164 FAIVPLLVMFTGTPVHAAIGTSILVIAMNTMAGLAGHLPHPPVDWPLAASLSITECAGSL 223

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + +  H+  +    AFA   L +  + L +
Sbjct: 224 AGARLARHISAAVRRWAFAGLMLAVSAVTLGQ 255



 Score = 39.7 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 13/112 (11%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRI 215
           Y+    G++ G +S  LG G  I T LL+    G  +++A ATS     L++  A++   
Sbjct: 10  YLIAALGLIIGIVSAILGAGPSILTVLLLTSVAGLELHRAVATSLVAVMLMSLVAVVPYA 69

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
                           V           SI    L+  ++ +I +  L + F
Sbjct: 70  MEN------------AVVWRYAFTFGLASITGAYLSGHIAGVIPEHILRVIF 109


>gi|71908524|ref|YP_286111.1| hypothetical protein Daro_2911 [Dechloromonas aromatica RCB]
 gi|71848145|gb|AAZ47641.1| Protein of unknown function DUF81 [Dechloromonas aromatica RCB]
          Length = 266

 Score = 66.2 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 91/268 (33%), Gaps = 36/268 (13%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L  ++ F  G + GL GVGGG +M P+L   F        +    A+GT L   A T   
Sbjct: 12  LYTLSGFAVGAIVGLTGVGGGSLMTPLLVLLF-------GVHPATAVGTDLLYAAMTKAG 64

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIFCLLMG 138
             + H R G I+  I             +T  ++S +          ++       LL  
Sbjct: 65  GTVAHGRKGHIDWSITGRLALGSIPAAAITVWVLSQLPKGNNVIGQLISNGLGFALLLTA 124

Query: 139 ILMLKRDRLY---------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN--LLMLF 187
           I +L   +L            R+     +    G + G L     VG G      L  L+
Sbjct: 125 IAILFGRKLREYAAQHDDSPLRQCCLGKITVAVGAILGVLVTISSVGAGALGVAALFFLY 184

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
              S  K   +    +  +              + GL  W LG V+   +  +L  S+  
Sbjct: 185 PKLSPVKIVGSDVAHAVPLTL------------VAGLGHWMLGGVDWALLGSLLLGSLPG 232

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             L T++S  + +  L    + ++    
Sbjct: 233 IWLGTQISAKVPEHILRRLLATMLVLIG 260



 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 44/117 (37%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +    + G L  +  VG G + V  L   +  +     +   VA         P ++++ 
Sbjct: 155 VAVGAILGVLVTISSVGAGALGVAALFFLYPKLSPVKIVGSDVAHA------VPLTLVAG 208

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + H   G ++  +L   +        + + + + V +  L +  A   +L+G  ++ 
Sbjct: 209 LGHWMLGGVDWALLGSLLLGSLPGIWLGTQISAKVPEHILRRLLATMLVLIGTKLVF 265


>gi|325281989|ref|YP_004254531.1| hypothetical protein Odosp_3399 [Odoribacter splanchnicus DSM
           20712]
 gi|324313798|gb|ADY34351.1| protein of unknown function DUF81 [Odoribacter splanchnicus DSM
           20712]
          Length = 250

 Score = 66.2 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 101/252 (40%), Gaps = 27/252 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +  +++  F SG ++ +F  GG +++VP L            +  HVA  T+   I  
Sbjct: 4   NSMLYLVLLGFASGFIN-MFAGGGSMLVVPFLIFL--------GLPPHVANATNRVAILL 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +++S    R+   +N K     +    + +++ +     +  + L K      ++M  +
Sbjct: 55  QNIVSTATFRQKKILNFKTDYPLLLPTTLGSILGAFTAVDIQAAVLQKMIGGLLVVMFFM 114

Query: 141 MLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYK 194
           +L     + +           +V+++  +  GF  G + +G G F    ++   G  + K
Sbjct: 115 ILLDPNTWVKSNIEKAKARHPWVRFLIFLGIGFYGGFIQIGVGFFMLGGLVLGCGYDLLK 174

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A A    +  +  F AL++ I+       L  W  G       LI+   ++    + T+L
Sbjct: 175 ANALKVLLILIYTFGALVIFIWY-----DLVDWRTG-------LILACGNMAGAWIGTRL 222

Query: 255 SYMIGKKYLTIG 266
           S   G KY+   
Sbjct: 223 SVKWGAKYIRYI 234


>gi|294669128|ref|ZP_06734212.1| putative integral membrane protein [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308942|gb|EFE50185.1| putative integral membrane protein [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 256

 Score = 66.2 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 91/261 (34%), Gaps = 24/261 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+++  F +G +    G GGGL+ +P L           S+       +  G +  T   
Sbjct: 9   LLLLTGFAAGLMDAAVG-GGGLLQIPGLFNLLPASTPVASVMGINKFASCCGTLTAT--- 64

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              ++ R   +  K+L     +    + + +  +      ++  A  +  + M +    +
Sbjct: 65  --RQYLRRIPVPWKMLLPAAVLAFAASYLGAKAVVFFPVQYMKPAMLLIMIAMCLYTFLK 122

Query: 145 DRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATAT 198
             L    +         +    +G + GF  G  G G G     + + FYG     A A+
Sbjct: 123 KDLGQAVRTEKLTRRETWWGLFFGALIGFYDGIFGPGTGSLLAFVFVRFYGYDFLTANAS 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  +++     AL   I              G V     + +   ++    +   L+   
Sbjct: 183 AKVINSTTNLAALTFFIPQ------------GHVVWVWAVPLALANLCGGIIGAHLAIRG 230

Query: 259 GKKYLTIGFSMIMFTTSFVFA 279
           G ++L  GF +++  T   FA
Sbjct: 231 GTRFLRYGFMLLLCLTIGKFA 251


>gi|121533526|ref|ZP_01665354.1| protein of unknown function DUF81 [Thermosinus carboxydivorans
           Nor1]
 gi|121308085|gb|EAX48999.1| protein of unknown function DUF81 [Thermosinus carboxydivorans
           Nor1]
          Length = 254

 Score = 66.2 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 81/206 (39%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           ++  ++ +  ++ A F +  +  + G GGGL+ +P L     L G+  +    +A+GT+ 
Sbjct: 2   ENISLEMVLFLLGAGFAASFIDSVVG-GGGLISLPALL----LTGLPPN----LALGTNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 ++ S +   R G +N+  +K    +     V    ++ H+   FL     +  +
Sbjct: 53  LASVMCTLTSTISFIRSGKVNLGAVKYLFPLSFFGAVAGVYVVRHMPPQFLRPLVIVMLI 112

Query: 136 LMGILMLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + + +L +     E  +         +  +  ++ GF  G  G G G F     L  G 
Sbjct: 113 AVAVYILVKKDWGKESTYRGFTKKTGLLSGLAALLLGFYDGFFGPGTGSFLIFAFLLLGF 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A   +  ++      A++  + 
Sbjct: 173 DFVEAAGNAKILNFASNIAAIVTFML 198



 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 13/119 (10%)

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
               G    F+   +G GGG+ +   +L  G     A  T+   S +    + +  I SG
Sbjct: 12  LLGAGFAASFIDSVVG-GGGLISLPALLLTGLPPNLALGTNKLASVMCTLTSTISFIRSG 70

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                        VN+GAV  + P+S         +   +  ++L     +++   +  
Sbjct: 71  K------------VNLGAVKYLFPLSFFGAVAGVYVVRHMPPQFLRPLVIVMLIAVAVY 117


>gi|110632717|ref|YP_672925.1| hypothetical protein Meso_0356 [Mesorhizobium sp. BNC1]
 gi|110283701|gb|ABG61760.1| protein of unknown function DUF81 [Chelativorans sp. BNC1]
          Length = 258

 Score = 66.2 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 84/254 (33%), Gaps = 11/254 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L     F +  + G  G+  G++     S      G+  +     A  +       T+
Sbjct: 4   FILFAAVGFAAQIVDGALGMAYGVIC----STVLLSFGVPPAY----ASASVHAAELFTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H  H  I+ ++         +   + + +++  + + +      +  L+G  ++
Sbjct: 56  AASGSAHLYHRNIDWRLFVRLAPFGILGGCIGAYVLTSFEGNAVKPFITTYLALVGGWLI 115

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            R             V    G V GFL  A G G G      +L  GA       T    
Sbjct: 116 FRSFRKIPSNPVPAKVVAPLGAVGGFLDAAGGGGWGPIVTTGLLGAGAPPRYVIGTVNAT 175

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFV-NIGAVLIILPISILITPLATKLSYMIGKK 261
             L+A    L  ++S    +     +  +V +  A+  ++   ++  P A  +   I ++
Sbjct: 176 EFLVATAVSLSFLFSLLTGHWEAAGT--YVEHAAAIGGLIVGGMVAAPFAGWILKSIKER 233

Query: 262 YLTIGFSMIMFTTS 275
            L      ++   +
Sbjct: 234 ILLRTIGCLIVLLA 247


>gi|119718969|ref|YP_919464.1| hypothetical protein Tpen_0051 [Thermofilum pendens Hrk 5]
 gi|119524089|gb|ABL77461.1| protein of unknown function DUF81 [Thermofilum pendens Hrk 5]
          Length = 255

 Score = 66.2 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 78/197 (39%), Gaps = 3/197 (1%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI-DDSICMHVAMGTSLGVI 78
           +    L  V+  L G   GL G GG ++ +P+L     L  + D    +HVA+GT+   +
Sbjct: 4   LTLYALSAVSGVLVGFALGLVGGGGSILAIPLLLYFAGLSSVLDQDTAVHVAIGTTSVAV 63

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              ++ +F  H + G   +K    +  +  + + + +L+        L     +  +L+ 
Sbjct: 64  GLNALANFAMHLKSGNAELKAGAVFAGIGTVASTLGALLGRQTKGQLLLALLGVAMVLLS 123

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             +  + R    +             + GF+SG LG+GGG      +L+ G  + KA  T
Sbjct: 124 FWVASKRRYAGGKTSLKR--LAAGSALVGFVSGFLGIGGGFLVAPALLWAGLDVKKAIGT 181

Query: 199 SAGVSALIAFPALLVRI 215
           S     L       V  
Sbjct: 182 SLLAVGLFGLSTSAVYA 198


>gi|254724767|ref|ZP_05186550.1| hypothetical protein BantA1_20239 [Bacillus anthracis str. A1055]
          Length = 256

 Score = 66.2 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 78/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLPPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G ++ KI+   I +  I  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAIYFIRSGKVDFKIVGKLIPLTVIGAVAGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +ATA+   ++ +    +L+  ++
Sbjct: 173 DFIQATASGKLLNFVSNIVSLITFLF 198


>gi|68249401|ref|YP_248513.1| permease [Haemophilus influenzae 86-028NP]
 gi|68057600|gb|AAX87853.1| predicted permease [Haemophilus influenzae 86-028NP]
          Length = 269

 Score = 66.2 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 98/264 (37%), Gaps = 12/264 (4%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I ++++    +  +S +FG+GGG++MVP+L   F       ++ + V   TSL ++  
Sbjct: 4   STIFILLICGICTNMVSAIFGIGGGVLMVPILRTLF------PALPIQVISATSLTIVMC 57

Query: 81  TSVMSF-MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           T++++    H++   I+   +  W   + I   +   +  +   + ++  F +    + I
Sbjct: 58  TALINLLFFHKQKIKIDYINMILWSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAI 117

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMV-----TGFLSGALGVGGGIFTNLLMLFYGASIYK 194
                        F  + ++   G +               GG I   L+    G    +
Sbjct: 118 KTFLNRSRIQIEVFNMSPIERAKGSISFCGGGLIAGITGIGGGSILAPLVGQLKGVKTQQ 177

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
               +  +  +     L   +   +  +      LG+VN   V ++   S  ++  + KL
Sbjct: 178 IAVYTNYMMIIGGIGNLYGYLTRAFPYDISLSGQLGYVNFLVVGVVTLGSFGMSFFSMKL 237

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
             ++         ++I+F  +   
Sbjct: 238 RGLMNPVLTRKLLAIILFCIAAYM 261


>gi|145220309|ref|YP_001131018.1| hypothetical protein Cvib_1505 [Prosthecochloris vibrioformis DSM
           265]
 gi|145206473|gb|ABP37516.1| conserved hypothetical protein [Chlorobium phaeovibrioides DSM 265]
          Length = 126

 Score = 66.2 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 11/126 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPT 81
           +  +++   L+G LSG+FG+GGG+++VP L            +  H A  TSL  ++ P 
Sbjct: 8   VITMLLIGSLAGILSGMFGIGGGVIIVPALVLLL-------GMTQHTANATSLVALLLPV 60

Query: 82  SVMSFMEHRRHGTINMKILK---DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            ++  +E+ R G I+M  +         L       + + +H+  S L KAFA+F  ++ 
Sbjct: 61  GILGALEYYRAGKISMDNVWLGLILAVGLFGGAYFGAKIATHLSGSVLRKAFAVFTGIVA 120

Query: 139 ILMLKR 144
           + +  +
Sbjct: 121 LRLWFK 126



 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 11/121 (9%)

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATS-AGVSALIAFPALLVRIY 216
             + G + G LSG  G+GGG+     L+L  G + + A ATS   +   +     L    
Sbjct: 11  MLLIGSLAGILSGMFGIGGGVIIVPALVLLLGMTQHTANATSLVALLLPVGILGALEYYR 70

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           +G              N+   LI+            K++  +    L   F++     + 
Sbjct: 71  AGKISMD---------NVWLGLILAVGLFGGAYFGAKIATHLSGSVLRKAFAVFTGIVAL 121

Query: 277 V 277
            
Sbjct: 122 R 122


>gi|145295452|ref|YP_001138273.1| hypothetical protein cgR_1386 [Corynebacterium glutamicum R]
 gi|140845372|dbj|BAF54371.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 250

 Score = 66.2 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 14/212 (6%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A   SL ++   +++  +     G + +K    +  +  + + V S + S++  S L   
Sbjct: 41  ATTASLIIVGLGALIGLISQYTAGQVRLKEGLSFGLLGLVGSFVGSRLASNIPDSLLLSG 100

Query: 130 FAIFCLLMGILMLKRDRLYCE--RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
           FAI  L++ + M+ + R   E   + P      +     GFL+G  GV GG      ++F
Sbjct: 101 FAILTLVVALTMISKLRSTREYITRRPSILAIALSATGVGFLTGFFGVDGGFAIVPALIF 160

Query: 188 -YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
             G S+ +A+ATS  V A+ +    +   YS          S           I+  ++L
Sbjct: 161 ALGFSMRQASATSLVVIAINS-AIAMGFRYSDLASIDCSVIS----------PIITTTVL 209

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 KL+  +    L +GF+  +   S   
Sbjct: 210 GAFSGVKLAKKVKASSLQLGFAGFLIFISIYM 241



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 8/128 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  I +++   G L+G FGV GG  +VP L  A           M  A  TSL VIA  S
Sbjct: 129 ILAIALSATGVGFLTGFFGVDGGFAIVPALIFALGF-------SMRQASATSLVVIAINS 181

Query: 83  VMSF-MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            ++    +    +I+  ++   I    +       +   V  S L   FA F + + I M
Sbjct: 182 AIAMGFRYSDLASIDCSVISPIITTTVLGAFSGVKLAKKVKASSLQLGFAGFLIFISIYM 241

Query: 142 LKRDRLYC 149
             ++    
Sbjct: 242 GFQNFPDL 249


>gi|311107348|ref|YP_003980201.1| hypothetical protein AXYL_04167 [Achromobacter xylosoxidans A8]
 gi|310762037|gb|ADP17486.1| hypothetical protein AXYL_04167 [Achromobacter xylosoxidans A8]
          Length = 259

 Score = 66.2 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 55/270 (20%), Positives = 111/270 (41%), Gaps = 32/270 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   + A  L G + G+ G+GGGL+ +P L            +   +A GT+L ++ PT 
Sbjct: 6   IAACLAAGGLIGFMGGVLGIGGGLIAIPALVLLM-------GMSQQLAQGTALIMVLPTI 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +M+  ++ +   I+ ++         + T V + +   +D   L ++FA+F   + +  +
Sbjct: 59  MMAVRKYNQQTRIDKRVALAGAAGAVVFTWVGAQLALGIDSGILRRSFAVFLFFIALFYV 118

Query: 143 ------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYG 189
                       ++                + GM+ G L G  GVGG +     +   + 
Sbjct: 119 WQTWRASRPAAARKPAAKGAAPVFTPRRASVLGMLCGTLGGFFGVGGAVLAVPIITTVFR 178

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
                A A +  +    +F AL+   ++G        W +G       + +   S+L  P
Sbjct: 179 LPQTTAQALALSMVIPGSFIALITYTWAGQA-----DWLVG-------VPLALGSLLFVP 226

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           +  KL+Y + ++ L   F++++F T  + A
Sbjct: 227 IGVKLAYRLPERKLRACFALMLFATVALLA 256


>gi|167750386|ref|ZP_02422513.1| hypothetical protein EUBSIR_01360 [Eubacterium siraeum DSM 15702]
 gi|167656537|gb|EDS00667.1| hypothetical protein EUBSIR_01360 [Eubacterium siraeum DSM 15702]
          Length = 126

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L+GLFG GGG V VP     F+  G +       A  +S+ +I   S+++ 
Sbjct: 18  LLYGSICGFLNGLFGSGGGTVAVPA----FEKNGTEP----KKAHASSVALIFVLSLVTA 69

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + +  +G ++     ++I    I  ++ S ++  +    +   F +  +  G+ M+ 
Sbjct: 70  VIYLINGKLDFGTALEYIPYGLIGAILGSFLLGKIPDRLIRIIFGLLMIASGVRMIL 126



 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 12/135 (8%)

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             +   +    + Y   ++G + GFL+G  G GGG          G    KA A+S  + 
Sbjct: 2   NSKRKRKSDRTEKYTHLLYGSICGFLNGLFGSGGGTVAVPAFEKNGTEPKKAHASSVALI 61

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            +++    ++ + +G             ++ G  L  +P  ++   L + L   I  + +
Sbjct: 62  FVLSLVTAVIYLINGK------------LDFGTALEYIPYGLIGAILGSFLLGKIPDRLI 109

Query: 264 TIGFSMIMFTTSFVF 278
            I F ++M  +    
Sbjct: 110 RIIFGLLMIASGVRM 124


>gi|55980804|ref|YP_144101.1| hypothetical protein TTHA0835 [Thermus thermophilus HB8]
 gi|55772217|dbj|BAD70658.1| conserved hypothetical membrane protein [Thermus thermophilus HB8]
          Length = 250

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 87/228 (38%), Gaps = 15/228 (6%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL                 A+  SL ++   +++  + +   G ++ + +  +     
Sbjct: 28  VPVLVYLL-------GEPPKQAIAESLLIVGGIALLGAVPYALRGLVDFRNVLFFGLPGM 80

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
             T + + +   V        FA+  LL    M +   L  +      +   + G+  G 
Sbjct: 81  AGTYLGAWLSRFVSGQVQLLTFALVMLLAAYFMARPLPLRRQEGGRTPWKIVLEGLFVGA 140

Query: 169 LSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           L+G +GVGGG      ++   G  ++ A  TS  + A+ +F      ++       LP  
Sbjct: 141 LTGFVGVGGGFLIVPALVLLGGLPMHLAVGTSLLIIAMKSFAGFYKYLHL------LPAL 194

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            L  VN     + + +  L + L  +++  + ++ L  GF++ +    
Sbjct: 195 GL-SVNYQVAGLFVLVGFLGSLLGGRVAVRLPQESLKRGFALFLVAMG 241



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 63/125 (50%), Gaps = 12/125 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I++     G L+G  GVGGG ++VP L            + MH+A+GTSL +IA  S   
Sbjct: 131 IVLEGLFVGALTGFVGVGGGFLIVPALVLL-------GGLPMHLAVGTSLLIIAMKSFAG 183

Query: 86  FMEHRRH-----GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           F ++         ++N ++   ++ V  + +++   +   + +  L + FA+F + MG+ 
Sbjct: 184 FYKYLHLLPALGLSVNYQVAGLFVLVGFLGSLLGGRVAVRLPQESLKRGFALFLVAMGVF 243

Query: 141 MLKRD 145
           ++ ++
Sbjct: 244 IVAQN 248


>gi|330685038|gb|EGG96711.1| putative membrane protein [Staphylococcus epidermidis VCU121]
          Length = 258

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 80/204 (39%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +I++  FL+  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   IYVILIIVLFGFLASFIDSVVG-GGGLISTPALLAI--------GLPPAVALGTNKLASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ S ++  R G +++KI+      + I +   + + + +    L     +   L+ I
Sbjct: 56  FGTLTSTIKFIRSGNVDLKIVSKLFPFVLIASSGGAYLATILPAHLLKPLIIVALSLVFI 115

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGM-----VTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             L +      R F                + GF  G +G G G F   ++L +G     
Sbjct: 116 YTLVKKDWGSIRTFTTFTPMKAVMFFTAYLIIGFYDGFIGGGTGSFMLFVLLMFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A   +  ++      AL++ +  G
Sbjct: 176 AAGNAKVLNFASNVGALILFMILG 199


>gi|312129044|ref|YP_003996384.1| hypothetical protein Lbys_0238 [Leadbetterella byssophila DSM
           17132]
 gi|311905590|gb|ADQ16031.1| protein of unknown function DUF81 [Leadbetterella byssophila DSM
           17132]
          Length = 271

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 98/269 (36%), Gaps = 37/269 (13%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +A+   G   G+ G GG ++ +P+L   F +  I       +A   SL ++  TS +  +
Sbjct: 7   LAAIAIGITLGMIGGGGSILTIPLLVYVFGIDPI-------LATLYSLFIVGSTSWVGGI 59

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVT-SLMISHVDKSFLNK-------------AFAIF 133
                G +N++    +     I+ ++T + +   +  + L                FA  
Sbjct: 60  PKYTQGLVNLRTALLFGIPSIISVLLTRAFIAPAIPNTILRIGNFQLEKSVFLMLLFASL 119

Query: 134 CLLMGILMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
            +   + M+K  R+       +          + G++ G L+G +G GGG      ++ +
Sbjct: 120 MIGASLSMIKDKRIRRNMMRSKSAEVKTTRIMLEGVMVGILTGLVGAGGGFLIIPALILF 179

Query: 189 G-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           G   +  A  TS     +IA  + +  +           W         +L +  ++I+ 
Sbjct: 180 GKLPMKIAVGTSL---IIIAANSSIGFLSGLSHHAEEIDWKF-------LLTLTALAIIG 229

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
             L  ++S     + L   F  ++     
Sbjct: 230 IFLGHRISKKWDGERLKKNFGRLILVLGI 258



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 9/128 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I++   + G L+GL G GGG +++P L            + M +A+GTSL +IA  S + 
Sbjct: 150 IMLEGVMVGILTGLVGAGGGFLIIPALILF-------GKLPMKIAVGTSLIIIAANSSIG 202

Query: 86  FME--HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           F+         I+ K L     +  I   +   +    D   L K F    L++GI +L 
Sbjct: 203 FLSGLSHHAEEIDWKFLLTLTALAIIGIFLGHRISKKWDGERLKKNFGRLILVLGITILV 262

Query: 144 RDRLYCER 151
            + +   +
Sbjct: 263 LEGIKIIK 270


>gi|330722002|gb|EGG99933.1| Putative membrane protein YfcA [gamma proteobacterium IMCC2047]
          Length = 257

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 106/263 (40%), Gaps = 27/263 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
              ++ + L+ + + ++G +  L G GGGL+ VP L     L G+       +A+GT+  
Sbjct: 5   QVSIELLALLFLVAVIAGFVDTLAG-GGGLITVPSLI----LAGVPPV----MALGTNKL 55

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                +  S M   R G ++   +K  +       ++ +L +  V    L+    +  LL
Sbjct: 56  QGCMGTATSTMFMFRKGKLSWVTIKLAMMYAFCGAILGTLSLQLVSSEVLSFVVPVVLLL 115

Query: 137 MGILMLKRDRLYCERKFP---DNYVKYIWGMVTGFLSGALGVGGGIFTNLL-MLFYGASI 192
           + +  +   +L  E + P       +       GF  G  G G G F +L  +   G  +
Sbjct: 116 IAVYFVFSAKLSLENQKPCMTVPAYRRSIVPAIGFYDGFFGPGTGSFFSLAGVALRGQGL 175

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             ATA++  ++      +L+V + +G  +     WS+G       L+++   ++      
Sbjct: 176 LDATASAKALNFSTNIASLIVFVVAGKIV-----WSIG-------LVMMAGQVIGAWFGA 223

Query: 253 KLSYMIGKKYLT--IGFSMIMFT 273
              + +  ++L   I F  ++  
Sbjct: 224 HCLFRVPLQFLRSLIVFVCLLML 246


>gi|308095512|ref|ZP_07663309.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466]
 gi|308085506|gb|EFO35201.1| conserved inner membrane protein [Vibrio parahaemolyticus Peru-466]
          Length = 204

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 78/204 (38%), Gaps = 17/204 (8%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F++G +  + G GGG++ VP L            +  H+A+GT+      
Sbjct: 7   TMLLVLALVAFVAGFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +   + +      +          +   + +L +  +   +L K   +  L   + 
Sbjct: 58  ASSTAAFTYYKKRLFKPQCWGRAFAATLVGATLGTLFVDAISTDWLEKVLPLIILAAALY 117

Query: 141 MLKRDRLYCERKFPDN-------YVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASI 192
            +    L+   + P           +Y+ G+  GF  G  G G G F T   M  Y  +I
Sbjct: 118 TVFHKTLHSPHQSPIPEPCPKLHKKQYLQGLSIGFYDGLAGPGTGAFWTVSSMALYRLNI 177

Query: 193 YKATATSAGVSALIAFPALLVRIY 216
             A+  +  ++     P LL+ ++
Sbjct: 178 LLASGLAKAMNFTSNLPHLLLSLF 201


>gi|330829405|ref|YP_004392357.1| hypothetical protein B565_1705 [Aeromonas veronii B565]
 gi|328804541|gb|AEB49740.1| Putative membrane protein [Aeromonas veronii B565]
          Length = 258

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 87/246 (35%), Gaps = 25/246 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +   + ++G +  + G GGGL+ VP L       G+  ++     +GT+    +  S
Sbjct: 8   LFALFGVALVAGFIDAIAG-GGGLLTVPALL----ATGMPPALV----LGTNKLQSSFGS 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R G +   ++   +    I   + +L +  +D + L +      +       
Sbjct: 59  FSATWFYARKGLLEWAMIWPAVICTFIGAAIGTLAVQTIDAAILERLLPFLLMAFACYFY 118

Query: 143 KRDRLY---CERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATAT 198
              R+      R+        + G   GF  G  G G G  F    +   G  + +ATA 
Sbjct: 119 FSPRVSDAESSRRLTPMLFALLVGGGVGFYDGFFGPGTGSFFAIGFVALAGFGMARATAH 178

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++      +LL     G  +     WS+GF        +     +     +K+    
Sbjct: 179 TKLLNFTSNIASLLFFALGGKVV-----WSVGF-------CMALGQFIGARFGSKMVLKK 226

Query: 259 GKKYLT 264
           G K + 
Sbjct: 227 GVKLIK 232


>gi|332187656|ref|ZP_08389391.1| hypothetical protein SUS17_2851 [Sphingomonas sp. S17]
 gi|332012222|gb|EGI54292.1| hypothetical protein SUS17_2851 [Sphingomonas sp. S17]
          Length = 262

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 97/262 (37%), Gaps = 25/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L   +  L G   GL G GG ++ VP++     +         HVA+GTS   +A  + 
Sbjct: 9   LLGAGSGSLVGFTLGLVGGGGSILAVPLMVYLVGVA------SPHVAIGTSALAVAANAG 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + H R  TI  +    +           S +    D   L   FA+  +L+G LMLK
Sbjct: 63  ANLVPHARQRTIKWRCAGMFAAAGVAGAYAGSTLGKAFDGQKLLFLFALLMILVGALMLK 122

Query: 144 RD----RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
           +         + +  +      +G  TG  SG  G+GGG      LM   G  +  A  +
Sbjct: 123 KRGDPGNPDVQCRRENAPKVIGYGGATGLFSGFFGIGGGFLIVPGLMASTGMPMRNAVGS 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S          A L   +SG             V+ G   + +   I+   +   LS+ +
Sbjct: 183 SLVAVTAFGLTAALNYAFSGL------------VDWGLAAVFIGGGIVGGIVGAALSHRL 230

Query: 259 G--KKYLTIGFSMIMFTTSFVF 278
              K  L   F++++F  +   
Sbjct: 231 SGHKGALNTIFAVLIFVVAAYM 252



 Score = 36.6 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 35/86 (40%), Gaps = 2/86 (2%)

Query: 62  DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV 121
              + M  A+G+SL  +    + + + +   G ++  +   +I    +  +V + +   +
Sbjct: 171 STGMPMRNAVGSSLVAVTAFGLTAALNYAFSGLVDWGLAAVFIGGGIVGGIVGAALSHRL 230

Query: 122 DKS--FLNKAFAIFCLLMGILMLKRD 145
                 LN  FA+   ++   ML R 
Sbjct: 231 SGHKGALNTIFAVLIFVVAAYMLWRS 256


>gi|27364025|ref|NP_759553.1| membrane protein [Vibrio vulnificus CMCP6]
 gi|37678813|ref|NP_933422.1| permease [Vibrio vulnificus YJ016]
 gi|27360142|gb|AAO09080.1| membrane protein [Vibrio vulnificus CMCP6]
 gi|37197554|dbj|BAC93393.1| predicted permease [Vibrio vulnificus YJ016]
          Length = 262

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 103/266 (38%), Gaps = 25/266 (9%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           L  D  ++ +  +   + ++G +  + G GGGL+ +P L            +    A+ T
Sbjct: 2   LELDITIEMLAALFFVASVAGFIDAMAG-GGGLLTLPALLA--------SGLSPTQALAT 52

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +    +  S  + +   R+G +++K +K  I    I   + + ++  +D S L     + 
Sbjct: 53  NKLQSSFGSFSASLYFVRNGIVSLKEMKVAIACTFIGAAIGAELVQVIDASVLTSLIPVL 112

Query: 134 CLLMGILMLKRDRLY---CERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
            + + +  L          + K  +       G   GF  G  G G G IFT   ++   
Sbjct: 113 LIAISLYFLLAPPTRNTGGQPKLSEAMFALSVGGGVGFYDGFFGPGTGSIFTVCFVVLGQ 172

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
            S+ +ATA +  ++      ALL  + +G     LP W +G       L++     +   
Sbjct: 173 FSLVEATARTKVLNFTSNIAALLFFVLAG-----LPVWKVG-------LVMAVGGFIGAR 220

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTS 275
           L  K+    G K++     ++    +
Sbjct: 221 LGAKVVVTKGHKWIRPLVIVMSMAMA 246



 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
              +    V GF+    G GGG+ T   +L  G S  +A AT+   S+  +F A L  + 
Sbjct: 12  AALFFVASVAGFIDAMAG-GGGLLTLPALLASGLSPTQALATNKLQSSFGSFSASLYFVR 70

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           +G             V++  + + +  + +   +  +L  +I    LT    +++   S 
Sbjct: 71  NGI------------VSLKEMKVAIACTFIGAAIGAELVQVIDASVLTSLIPVLLIAISL 118

Query: 277 VF 278
            F
Sbjct: 119 YF 120


>gi|156933079|ref|YP_001436995.1| hypothetical protein ESA_00889 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531333|gb|ABU76159.1| hypothetical protein ESA_00889 [Cronobacter sakazakii ATCC BAA-894]
          Length = 268

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 93/237 (39%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +  +   + L+G +  L G GGGL+ VP L       G+  +     A+ T+       
Sbjct: 13  LLTALFFVAMLAGFIDALAG-GGGLLTVPALL----AAGMSPAQ----ALATNKLQACGG 63

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R G +++   K  I +  I +   +L++ HV    L +   +  + +G+  
Sbjct: 64  SLSASLYFIRRGVVSLHDQKLNILMTFIGSTSGALLVQHVQSDILRQILPVLVIAIGLYF 123

Query: 142 LKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   RL     +R+        + G   GF  G  G G G F  L  +   G  + K+TA
Sbjct: 124 LLMPRLGEDDRQRRLYGLPFALVAGGCVGFYDGFFGPGAGSFYALAFVTLAGFGLAKSTA 183

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++A      LL+ I  G             V  G   ++L    L   L ++L
Sbjct: 184 HAKVLNATSNVGGLLLFIIGGK------------VIWGTGFVMLAGQFLGARLGSRL 228


>gi|57237397|ref|YP_178410.1| hypothetical protein CJE0391 [Campylobacter jejuni RM1221]
 gi|57166201|gb|AAW34980.1| membrane protein, putative [Campylobacter jejuni RM1221]
 gi|315057767|gb|ADT72096.1| membrane protein [Campylobacter jejuni subsp. jejuni S3]
          Length = 261

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 70/185 (37%), Gaps = 13/185 (7%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           LFG+GGG+++VP +               H A+G S+  +   +V     + +   +N+K
Sbjct: 21  LFGIGGGMIIVPSMFAL--------GASAHHAIGISVLQMIFAAVFGSYINYKKKNLNLK 72

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD--- 155
                 F   I    + +++  +    L   F     +  I      +    +       
Sbjct: 73  DGIMIGFGGLIGASFSGMLLKALSDVALTSVFLAVSCIFFIKYAFGIKENIVQNQRSVCV 132

Query: 156 -NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
            N + +I G  TG  + +LG+GGG+    ++ ++ G    K  + S       +   ++ 
Sbjct: 133 KNIILFIAGAFTGIFAISLGIGGGLLIAPILAYFLGYDSKKVVSLSLFFVIFASVSGIIS 192

Query: 214 RIYSG 218
              SG
Sbjct: 193 FSNSG 197


>gi|86149219|ref|ZP_01067451.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88597301|ref|ZP_01100536.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|121612892|ref|YP_001000055.1| hypothetical protein CJJ81176_0367 [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|148926437|ref|ZP_01810120.1| putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|167005011|ref|ZP_02270769.1| hypothetical protein Cjejjejuni_01840 [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|205356004|ref|ZP_03222772.1| putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|218562002|ref|YP_002343781.1| putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|85840577|gb|EAQ57834.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|87250123|gb|EAQ73081.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|88190362|gb|EAQ94336.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112359708|emb|CAL34494.1| putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|145844600|gb|EDK21706.1| putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|205346128|gb|EDZ32763.1| putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|284925615|gb|ADC27967.1| putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315927854|gb|EFV07179.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315930647|gb|EFV09668.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 261

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 70/185 (37%), Gaps = 13/185 (7%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           LFG+GGG+++VP +               H A+G S+  +   +V     + +   +N+K
Sbjct: 21  LFGIGGGMIIVPSMFAL--------GASAHHAIGISVLQMIFAAVFGSYINYKKKNLNLK 72

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD--- 155
                 F   I    + +++  +    L   F     +  I      +    +       
Sbjct: 73  DGIMIGFGGLIGASFSGMLLKALSDVALTSVFLAVSCIFFIKYAFGIKENIVQNQRSVWV 132

Query: 156 -NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
            N + +I G  TG  + +LG+GGG+    ++ ++ G    K  + S       +   ++ 
Sbjct: 133 KNVILFIAGAFTGIFAISLGIGGGLLIAPILAYFLGYDSKKVVSLSLFFVIFASVSGIIS 192

Query: 214 RIYSG 218
              SG
Sbjct: 193 FSNSG 197


>gi|15674200|ref|NP_268375.1| permease [Lactococcus lactis subsp. lactis Il1403]
 gi|281492898|ref|YP_003354878.1| transport protein [Lactococcus lactis subsp. lactis KF147]
 gi|12725284|gb|AAK06316.1|AE006450_9 permease [Lactococcus lactis subsp. lactis Il1403]
 gi|281376550|gb|ADA66036.1| Transport protein [Lactococcus lactis subsp. lactis KF147]
 gi|326407809|gb|ADZ64880.1| transmembrane protein [Lactococcus lactis subsp. lactis CV56]
          Length = 283

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 80/246 (32%), Gaps = 43/246 (17%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + +  A+G S+  +  TS  + + + +   IN++          I  +V +++    D 
Sbjct: 41  GVDIKYAIGASIVAVIATSSGAAISYLKDDMINVRTAMFLEIFTTIGGLVGAILAGFFDA 100

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCER------------------------------KF 153
           + LN  F    +  G  M ++     E                               + 
Sbjct: 101 TILNILFGCLLIFQGYNMWRKMHKGEEVVQKVESDKIAEKLKLNSSYYDKQLGKEIPYQV 160

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALL 212
                     +  G  SG LG+G G+F  + M       +  +TATS  +  + A  +  
Sbjct: 161 EKVPGGAAVMLGAGVASGLLGIGSGVFKVMAMDSMMKMPLKASTATSNLMIGVTAAASAT 220

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           V  ++            G+VN      +    +    L +K+   +  K + + F  ++ 
Sbjct: 221 VYFFN------------GYVNPSLAGPLAIGIVAGAALGSKIMPKLPAKTIRLIFIPVIL 268

Query: 273 TTSFVF 278
             +   
Sbjct: 269 IMALQM 274



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 11/114 (9%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV--AMGTSLGVIAPTSVMSFMEHR 90
           +G  SGL G+G G          F++M +D  + M +  +  TS  +I  T+  S   + 
Sbjct: 173 AGVASGLLGIGSG---------VFKVMAMDSMMKMPLKASTATSNLMIGVTAAASATVYF 223

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +G +N  +       +     + S ++  +    +   F    L+M + ML +
Sbjct: 224 FNGYVNPSLAGPLAIGIVAGAALGSKIMPKLPAKTIRLIFIPVILIMALQMLLK 277


>gi|86151262|ref|ZP_01069477.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|157414640|ref|YP_001481896.1| hypothetical protein C8J_0320 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|315123908|ref|YP_004065912.1| hypothetical protein ICDCCJ07001_314 [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85841609|gb|EAQ58856.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|157385604|gb|ABV51919.1| putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|307747280|gb|ADN90550.1| Putative membrane protein [Campylobacter jejuni subsp. jejuni M1]
 gi|315017630|gb|ADT65723.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315931579|gb|EFV10545.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 261

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 70/185 (37%), Gaps = 13/185 (7%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           LFG+GGG+++VP +               H A+G S+  +   +V     + +   +N+K
Sbjct: 21  LFGIGGGMIIVPSMFAL--------GASAHHAIGISVLQMIFAAVFGSYINYKKKNLNLK 72

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD--- 155
                 F   I    + +++  +    L   F     +  I      +    +       
Sbjct: 73  DGIMIGFGGLIGASFSGMLLKALSDVALTSVFLAVSCIFFIKYAFGIKENIVQNQRSVWV 132

Query: 156 -NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
            N + +I G  TG  + +LG+GGG+    ++ ++ G    K  + S       +   ++ 
Sbjct: 133 KNVILFIAGAFTGIFAISLGIGGGLLIAPILAYFLGYDSKKVVSLSLFFVIFASVSGIIS 192

Query: 214 RIYSG 218
              SG
Sbjct: 193 FSNSG 197


>gi|237751169|ref|ZP_04581649.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
 gi|229373614|gb|EEO24005.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
          Length = 253

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 97/254 (38%), Gaps = 24/254 (9%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  D  +D   ++  A+F +G +  + G GGG++ +P L     L GI      H A+G 
Sbjct: 1   MLGDLGLDIYAILFCAAFCAGFIDSIAG-GGGMITIPALF----LAGIPP----HQALGV 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  + M   + G I +K     +  + +     +L++  ++  FL K     
Sbjct: 52  NKLQSCFGSFSATMHFYKKGHIVLKDNIIPVICVFLCAAGGTLLVQFLEAQFLAKCIPFL 111

Query: 134 CLLMGILMLKRDRLYCERKFP--DNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGA 190
            ++  +  L   ++  E+      + + Y      GF  G  G G G      L++  G 
Sbjct: 112 LIVFALYFLFSPKITEEQSHVRYTHALLYFVLGAIGFYDGFFGPGTGSFLMLALIMLGGY 171

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            +  A A +   +      ++LV    G  L     W LGF       ++     +   L
Sbjct: 172 GLKNALAHAKLFNFTSNLASMLVFAIGGQIL-----WVLGF-------LMGAGQFIGANL 219

Query: 251 ATKLSYMIGKKYLT 264
            ++L+   G K + 
Sbjct: 220 GSRLALRYGIKIVK 233


>gi|325102991|ref|YP_004272645.1| siroheme synthase [Pedobacter saltans DSM 12145]
 gi|324971839|gb|ADY50823.1| siroheme synthase [Pedobacter saltans DSM 12145]
          Length = 507

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 94/257 (36%), Gaps = 26/257 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            + A F+   + G  G+  G+      +     MGI  +     + G  +  I    +  
Sbjct: 256 FLAAGFVFAMIDGAIGMSYGVTT----TTFSLSMGIPPASA---STGVHISEILSNGIAG 308

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD--KSFLNKAFAIFCLLMGILMLK 143
              H + G +N K+ K  +    I  V  + ++S ++    +     +++   +G+L+L+
Sbjct: 309 -WMHYKMGNVNKKLFKLLVVAGIIGAVTGAYLLSSLEHYSHYTKPIISVYTFSLGVLILR 367

Query: 144 RDRLYCERKFPDNYVKYI-----WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           +  L  +R       K I      G   GF+    G G G      ++  G     +  +
Sbjct: 368 KAFLAQQRAKKKIKTKKITKIKPLGFFGGFIDAVGGGGWGTIVLSSLIAGGRHARFSLGS 427

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                  IA  + L  I             L  ++   V  ++  S + +P+A K+S  I
Sbjct: 428 VKLSRFFIALMSSLTFITM-----------LDNLHWYVVSGLVLGSAIASPIAAKVSNKI 476

Query: 259 GKKYLTIGFSMIMFTTS 275
             K + +   +I+   S
Sbjct: 477 SAKSIMVAVGVIVILAS 493


>gi|124268986|ref|YP_001022990.1| hypothetical protein Mpe_A3802 [Methylibium petroleiphilum PM1]
 gi|124261761|gb|ABM96755.1| conserved hypothetical transmembrane protein [Methylibium
           petroleiphilum PM1]
          Length = 253

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 91/254 (35%), Gaps = 25/254 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + +AS  +G +  + G GGGL++VP L   F               GT+ G     +
Sbjct: 4   LATVTLASLFAGFVDAIVG-GGGLILVPALFSVF------PGAAPATLFGTNKGAAVWGT 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +  ++ R  T+  + L        + +   +  +  V    L +A     L + +  L
Sbjct: 57  AWATAQYARRVTLPWQALLPAAGAALVGSFAGAWAVMQVSADGLRRALPFILLGVLLYTL 116

Query: 143 KRDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKAT 196
            R  L    +       +       G V GF  G  G G G F   L +   G     A+
Sbjct: 117 VRKDLGRTHEPQHSGVRETAWACGIGAVVGFYDGFFGPGTGSFFVFLFVRLLGYDFLHAS 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A++  ++      AL    +S            G V     L++   ++  + L T+L+ 
Sbjct: 177 ASAKLLNTATNLSALAAFAWS------------GHVWWHVALVMAVANVAGSLLGTRLAL 224

Query: 257 MIGKKYLTIGFSMI 270
             G  ++   F ++
Sbjct: 225 RHGAGFVRGVFIVV 238


>gi|255535723|ref|YP_003096094.1| hypothetical protein FIC_01585 [Flavobacteriaceae bacterium
           3519-10]
 gi|255341919|gb|ACU08032.1| hypothetical protein FIC_01585 [Flavobacteriaceae bacterium
           3519-10]
          Length = 265

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 7/122 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +I+   L G ++GL G GGG +++P L    +L        +  A+GTSL +I+  S+
Sbjct: 147 TAVILHGALVGFVTGLIGAGGGFLIIPALVGLLKLD-------IKKAIGTSLFIISLNSI 199

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
             F        I   ++   + +      + S + + ++   L  AF  F L+MG+ ++ 
Sbjct: 200 FGFSVSVSQFVIEWNLILKILGLAAAGVFIGSWLSTKIEGKKLKPAFGWFVLVMGVYIII 259

Query: 144 RD 145
           ++
Sbjct: 260 KE 261



 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 87/248 (35%), Gaps = 38/248 (15%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL   F+       +   VA   SL ++  TSV     + R G +++K    +     
Sbjct: 28  VPVLVYLFR-------VDASVATVYSLFIVGVTSVAGSFSYFRKGLVHLKTALIFGIPSI 80

Query: 109 ITTVVT-SLMISHVDKSF-------------LNKAFAIFCLLMGILMLKRDR----LYCE 150
           I+  +T + ++  + +               L   FA+  +     M+K+         E
Sbjct: 81  ISVFITRTYIVPAIPEEIMSVGGFIITKDIMLMLVFAVLMIFASYSMIKKCTGADCFPSE 140

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFP 209
            +   N    + G + GF++G +G GGG      ++      I KA  TS     +I+  
Sbjct: 141 DQKVKNTAVILHGALVGFVTGLIGAGGGFLIIPALVGLLKLDIKKAIGTSL---FIISLN 197

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           ++     S              +    +L IL ++     + + LS  I  K L   F  
Sbjct: 198 SIFGFSVSVSQFV---------IEWNLILKILGLAAAGVFIGSWLSTKIEGKKLKPAFGW 248

Query: 270 IMFTTSFV 277
            +      
Sbjct: 249 FVLVMGVY 256


>gi|295401404|ref|ZP_06811375.1| protein of unknown function DUF81 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312109639|ref|YP_003987955.1| hypothetical protein GY4MC1_0512 [Geobacillus sp. Y4.1MC1]
 gi|294976619|gb|EFG52226.1| protein of unknown function DUF81 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311214740|gb|ADP73344.1| protein of unknown function DUF81 [Geobacillus sp. Y4.1MC1]
          Length = 273

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 94/276 (34%), Gaps = 34/276 (12%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+++  FL+GT+  L G+GGG+++VP L      +     +   VA+GTSL VI    
Sbjct: 4   VLLLVIVGFLAGTVGSLVGLGGGVIIVPSLLFL-GAIHWLPHVTPQVAVGTSLVVIIFNG 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S + + +   ++ +    +        ++ + M + +     +  F +F + +   + 
Sbjct: 63  LSSTLSYMKEKMVDYRSGLLFFIGSGPGAIIGAWMNNKLSLEHFSLYFGLFLIAVSFFLS 122

Query: 143 KRDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGVGGGI----------------FT 181
                    +         Y+      VT        +                      
Sbjct: 123 FSSNASARSQRKPFKITRTYITNEGETVTYGYHPLAAIAISFVVGFFGGMFGIGGGSLMV 182

Query: 182 NLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
             +++ +    + A ATS  +  L +  + L  ++            +G V     L ++
Sbjct: 183 PAMIILFFFPPHVAVATSMFMIFLSSLVSSLTHVF------------MGNVQWLFALSLI 230

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           P           ++  +  K + I   +++      
Sbjct: 231 PGVWFGAKTGAFINKRLRSKTIVIALRLVLVLLGIR 266



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 7/99 (7%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +MVP +   F           HVA+ TS+ +I  +S++S + H   G +        I  
Sbjct: 180 LMVPAMIILFFF-------PPHVAVATSMFMIFLSSLVSSLTHVFMGNVQWLFALSLIPG 232

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           +       + +   +    +  A  +  +L+GI ++ + 
Sbjct: 233 VWFGAKTGAFINKRLRSKTIVIALRLVLVLLGIRLIYQS 271


>gi|167855492|ref|ZP_02478255.1| hypothetical protein HPS_04142 [Haemophilus parasuis 29755]
 gi|167853358|gb|EDS24609.1| hypothetical protein HPS_04142 [Haemophilus parasuis 29755]
          Length = 257

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 96/239 (40%), Gaps = 25/239 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   ++ VA+F++G +  + G GGGL+ +P L       G   +    VA+GT+     
Sbjct: 5   LDVAIILFVAAFVAGFIDAIAG-GGGLITIPALLAV----GFPPA----VALGTNKLQAC 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  + +   R   ++++ +   I +  I   + ++++  +D + L  A     L++G 
Sbjct: 56  GGSFSASLYFVRKKAVDLRQIWLLILLTFIGGSIGTILVQMIDVNALKVALPFLILIIGC 115

Query: 140 LMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
             L    L  E   ++           M  GF  G  G   G F  L  +L  G ++ ++
Sbjct: 116 YFLFSPSLGDEQRRQRMSFPMFACTAAMGIGFYDGLFGPATGSFFTLAFVLLLGFNLTQS 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            A S  ++      +L+  I  G        W +GF       +++    +   L  ++
Sbjct: 176 VAHSKVLNFTSNLASLIFFIIGG-----AILWKIGF-------LMMIGQFIGASLGARM 222


>gi|218532302|ref|YP_002423118.1| hypothetical protein Mchl_4414 [Methylobacterium chloromethanicum
           CM4]
 gi|218524605|gb|ACK85190.1| protein of unknown function DUF81 [Methylobacterium
           chloromethanicum CM4]
          Length = 300

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 72/201 (35%), Gaps = 15/201 (7%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S + H R G ++  + +  +    I  V  + +++ VD   +    +++ L MG
Sbjct: 106 IFTTAFSGLSHWRLGNVDGPLFRRLLIPGVIGAVAGATLLTSVDGETIKPFVSVYLLGMG 165

Query: 139 ILMLKR--DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           + +L +    L      P   V    G   GF+    G G G      ++  G     + 
Sbjct: 166 LYVLSKAFRSLKANCAPPRAVVPLALGG--GFVDAIGGGGWGPVVTATLVGGGQDPRTSI 223

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            +       +A  + L     G           G  +   +  ++   +   P+A  L  
Sbjct: 224 GSVNAAEFFVAVASGLSFTLLG-----------GLTHWTTIAGLVVGGLFAAPIAALLVR 272

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
           +I  + L +   +++ + S V
Sbjct: 273 VIPARVLMVVVGLLIASLSLV 293


>gi|220919691|ref|YP_002494994.1| protein of unknown function DUF81 [Methylobacterium nodulans ORS
           2060]
 gi|219952111|gb|ACL62502.1| protein of unknown function DUF81 [Methylobacterium nodulans ORS
           2060]
          Length = 244

 Score = 66.2 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 82/234 (35%), Gaps = 20/234 (8%)

Query: 44  GGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDW 103
           GG+++VPV++           I +  A+  ++     T +   +   R+G+I   +    
Sbjct: 22  GGVILVPVMTLGI-------GIPIGTAIAAAMAGYVLTGLSGTLVFGRNGSIRWTLALSL 74

Query: 104 IFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF-PDNYVKYIW 162
                   ++ +     ++   +    A   ++ G+  L+ + +                
Sbjct: 75  CLGAAPGALLGAWASGAINAHIIEMLIAALAIMSGLYNLRGNSVVDTPPLALGTLGFVAM 134

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           G   G LS   G GG +    L+L +G  +  A      +   +A  A L          
Sbjct: 135 GACVGLLSAVTGTGGPVILVPLLLTFGYPVLTAVGLGQAIQLPVAALATLG--------- 185

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
               ++ G ++I   +++     + + +   +++ + +  L    + ++  T  
Sbjct: 186 ---AYAFGSLDIYLSVLLSIGLAVGSTVGAGVAHHVPRATLRTIAASVLIATGA 236



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 53/140 (37%), Gaps = 8/140 (5%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           LYN      +    +       +      G LS + G GG +++VP+L            
Sbjct: 110 LYNLRGNSVVDTPPLALGTLGFVAMGACVGLLSAVTGTGGPVILVPLLLTF--------G 161

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
             +  A+G    +  P + ++ +     G++++ +       L + + V + +  HV ++
Sbjct: 162 YPVLTAVGLGQAIQLPVAALATLGAYAFGSLDIYLSVLLSIGLAVGSTVGAGVAHHVPRA 221

Query: 125 FLNKAFAIFCLLMGILMLKR 144
            L    A   +  G  ++ R
Sbjct: 222 TLRTIAASVLIATGAFIIFR 241


>gi|157164354|ref|YP_001466719.1| hypothetical protein CCC13826_0160 [Campylobacter concisus 13826]
 gi|112800166|gb|EAT97510.1| inner membrane protein YfcA [Campylobacter concisus 13826]
          Length = 253

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 99/255 (38%), Gaps = 25/255 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  VA+FL G +  + G GGGL+ +P +      MG+      H+A+GT+       S 
Sbjct: 9   VVFFVAAFLGGFIDAIAG-GGGLITLPAIM----AMGVPP----HLALGTNKLQGVFGSF 59

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + +   + G I+ K     I    I  ++ + +I  ++ +FL        + + I  L 
Sbjct: 60  TATLNFTKKGLIDYKECFVGIVFTFIGALIGATLILFLNANFLKIIIPFLLIAIFIYTLF 119

Query: 144 RDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATS 199
             ++       K  +     I+G++ GF  G  G G G F    M+   G ++ KA A +
Sbjct: 120 MPKIGENDRAAKMNERLFYVIFGLILGFYDGFFGPGAGSFWMFAMVALIGLNLKKAVAHT 179

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             ++      AL V I  G             +      ++    IL     + L     
Sbjct: 180 KALNFTSNIVALGVFIAGGQ------------ILWLVGFLMAVGQILGAYFGSNLVIKKE 227

Query: 260 KKYLTIGFSMIMFTT 274
            K++   F +++  T
Sbjct: 228 VKFIRTMFLIVVAAT 242


>gi|158929996|gb|ABW82977.1| permease [uncultured bacterium pEAF66]
          Length = 257

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 59/271 (21%), Positives = 105/271 (38%), Gaps = 32/271 (11%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +   IV+ F  G L G+ GVGGG +M P+L+  F   G+  S    VA+GT L   + T
Sbjct: 1   MLITYIVSGFAVGLLVGMTGVGGGSLMTPLLTLIF---GVPPS----VAVGTDLAFASIT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIFCL 135
                  HR  GT+   I+K          V T+L +            F+  + A   L
Sbjct: 54  KSAGAFTHRLRGTVRWDIVKLLCIGALPAAVATALALKQYGALDASIGQFIRYSIAGSVL 113

Query: 136 LMGILMLKRDRL------YCERKFPDNYV---KYIWGMVTGFLSGALGVGGGIFTNLLML 186
           L  + ++ + ++      + ER+     +       G+  G L     +G G     L++
Sbjct: 114 LTVVALIFKGKMLAWLNAHPERQLQGRALDAATVFAGLGLGVLVTISSIGAGAIGATLLV 173

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
                   + A  AG     A P   +  +  W         LG +N   + ++L  S+ 
Sbjct: 174 M--LYPRLSAAEVAGTDIAYAVPLTAIAAFGHWW--------LGSINWTLLAMLLVGSLP 223

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              L + ++  + +K+L +  +M +   +  
Sbjct: 224 GITLGSWIAKSVPEKFLRVLLAMTLTGVAAK 254



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 41/117 (35%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + A    G L  +  +G G +   +L   +  +   +        GT +    P + ++ 
Sbjct: 147 VFAGLGLGVLVTISSIGAGAIGATLLVMLYPRLSAAEVA------GTDIAYAVPLTAIAA 200

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
             H   G+IN  +L   +        + S +   V + FL    A+    +   ++ 
Sbjct: 201 FGHWWLGSINWTLLAMLLVGSLPGITLGSWIAKSVPEKFLRVLLAMTLTGVAAKLIY 257


>gi|145630553|ref|ZP_01786333.1| 50S ribosomal protein L17 [Haemophilus influenzae R3021]
 gi|144983943|gb|EDJ91385.1| 50S ribosomal protein L17 [Haemophilus influenzae R3021]
          Length = 269

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 96/264 (36%), Gaps = 12/264 (4%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I ++++    +  +S +FG+GGG++MVP+L   F        + + V   TSL ++  
Sbjct: 4   STIFILLICGICTNMVSAIFGIGGGVLMVPILRTLF------PELPIQVISATSLTIVMC 57

Query: 81  TSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           T++++ +   +    I+   +  W   + I   +   +  +   + ++  F +    + I
Sbjct: 58  TALINLLFFYKQKIKIDYINMILWSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAI 117

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMV-----TGFLSGALGVGGGIFTNLLMLFYGASIYK 194
                        F  + ++   G +               GG I   L+    G    +
Sbjct: 118 KTFLNRSRIQIEVFNMSPIERAKGSISFCGGGLIAGITGIGGGSILAPLVGQLKGVKTQQ 177

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
               +  +  +     L   +   +  +      LG+VN   V ++   S  ++  + KL
Sbjct: 178 IAVYTNYMMIIGGIGNLYGYLTRAFPYDISLSGQLGYVNFLVVGVVTLGSFGMSFFSMKL 237

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
             ++         ++I+F  +   
Sbjct: 238 RGLMNPVLTRKLLAIILFCIAAYM 261


>gi|225862895|ref|YP_002748273.1| hypothetical protein BCA_0984 [Bacillus cereus 03BB102]
 gi|225790401|gb|ACO30618.1| putative membrane protein [Bacillus cereus 03BB102]
          Length = 255

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SILIILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNY--VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +  +   +  V GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFVIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNVGALLMFMYVG 201



 Score = 35.4 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|303229162|ref|ZP_07315963.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a]
 gi|302516175|gb|EFL58116.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a]
          Length = 264

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 100/253 (39%), Gaps = 26/253 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + L+ VA   +G +  + G GGGL+ VP +           ++   VA+G++     
Sbjct: 14  VMILILLAVAGAFAGFVDSIVG-GGGLISVPAMLL--------TNLPPSVALGSNKLSSI 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  + +   R+  ++ ++++  +    I +++ +L +  +   ++     +  + + +
Sbjct: 65  FGAGSASITFLRNHMVDFRLVRKLLPFTFIGSMLGTLAVVSLSPLYVKPIIIVLLVAVTL 124

Query: 140 LMLKRDRLYCERKFPDNYVKYI-----WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            ++ +       +      + +     + +  G   G +G G G F  +  +F G     
Sbjct: 125 FVVFKKNWGEVNRTSQVMGRALYICMAFALGIGIYDGFIGPGTGTFLIMGFIFTGFDFLH 184

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A +  ++      +LLV +Y            LG VNI   L      ++   L + L
Sbjct: 185 ASANAKILNFTSNLASLLVFLY------------LGHVNIMYGLAAAVGQVVGAYLGSHL 232

Query: 255 SYMIGKKYLTIGF 267
           +   G   + + F
Sbjct: 233 AIAKGSSLVRVVF 245


>gi|91775905|ref|YP_545661.1| hypothetical protein Mfla_1552 [Methylobacillus flagellatus KT]
 gi|91709892|gb|ABE49820.1| protein of unknown function DUF81 [Methylobacillus flagellatus KT]
          Length = 344

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 94/219 (42%), Gaps = 17/219 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I + +F++  LS + G G GL+++P+L        +  +    +++GTS      +S+  
Sbjct: 6   IFLVAFVAFALSMVCGGGAGLLLIPILGYVLPAAQVPAA----LSIGTS-----VSSLTK 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
                R   +N  I+K ++       ++ + ++S++   ++    A+F +     + +++
Sbjct: 57  LYLFFRQ--VNWTIVKHFLPSALPGVLIGAWLLSYLAPMYIELCMAVFLVSNLPYLFRKE 114

Query: 146 RLYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
               + K    N+   + G + GF+S   G  G +  N + L YG +  +  AT A    
Sbjct: 115 PTASKDKPRYSNHFLKLIGFLAGFISALTGAVG-VLFNGVYLRYGLAKEEIVATRAANEL 173

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           ++    L      G     L  ++LG   + A+  I+  
Sbjct: 174 ILHLVKLCSYASLGL--FTLEAFNLGI--LVAMAAIVST 208


>gi|86358099|ref|YP_469991.1| hypothetical protein RHE_CH02487 [Rhizobium etli CFN 42]
 gi|86282201|gb|ABC91264.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 261

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 92/266 (34%), Gaps = 25/266 (9%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            D  +  I L+  A+F +G +  + G GGGL+ VP +  A    GI         +GT+ 
Sbjct: 2   PDIALHLILLLCAAAFFAGFVDAIAG-GGGLITVPAMLIA----GIPPLQT----LGTNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  + + + R G + +        +  +   + + + + V    L     +  L
Sbjct: 53  VQSIFGAASATLAYARKGHVELSEQLPMALMAVMGGALGAALATIVPGQVLQAIMPVLLL 112

Query: 136 LMGILMLKRDRLY---CERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGAS 191
            + I    +  L      R               GF  G  G G G  F    +   G  
Sbjct: 113 AIAIFFAVKPNLNDLDKHRLITPFAFGLTLVPAIGFYDGVFGPGTGSFFMLAFVTLAGFG 172

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           + KATA +  ++    F AL+V              S G +     L++     L   + 
Sbjct: 173 VLKATAHTKLLNLGSNFGALIVFA------------SFGAILWKIGLLMGLCQFLGAQVG 220

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
           ++L+  IG K +     ++    +  
Sbjct: 221 SRLAMRIGAKLIKPLLVIVCVALAVK 246



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 13/123 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
            +        GF+    G GGG+ T   ML  G    +   T+   S   A  A L    
Sbjct: 10  LLLCAAAFFAGFVDAIAG-GGGLITVPAMLIAGIPPLQTLGTNKVQSIFGAASATLAYAR 68

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                        G V +   L +  ++++   L   L+ ++  + L     +++   + 
Sbjct: 69  K------------GHVELSEQLPMALMAVMGGALGAALATIVPGQVLQAIMPVLLLAIAI 116

Query: 277 VFA 279
            FA
Sbjct: 117 FFA 119


>gi|89073991|ref|ZP_01160497.1| hypothetical protein SKA34_15515 [Photobacterium sp. SKA34]
 gi|89050319|gb|EAR55823.1| hypothetical protein SKA34_15515 [Photobacterium sp. SKA34]
          Length = 259

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 100/265 (37%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  ++   ++   + L+G +  + G GGGL+ VP L       GI  +      + T+  
Sbjct: 2   ELTLEIFVILFFVAGLAGFIDAIAG-GGGLLTVPALLSV----GIPPAQV----LATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  S  + +   R+G + +K ++  I      + + +L++ H+D   L     +  + 
Sbjct: 53  QSSFGSFSASLYFVRNGLVKLKDMRLAIACTFTGSAIGALLVQHIDAGILTSLIPLLLIF 112

Query: 137 MGILMLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           + +  L      +   + K  +    +  G   GF  G  G G G    +  +      +
Sbjct: 113 VSLYFLFSPNIGKPQGDPKLSEAMFAFAVGTSIGFYDGFFGPGTGSLFTICFIAIAKFGL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++      AL   I +G     LP W LG       LI+     +   L  
Sbjct: 173 VEATARTKILNFTSNIAALTFFIIAG-----LPIWKLG-------LIMAIGGFIGARLGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
            +    G+K++     ++    +  
Sbjct: 221 HIVINKGQKFIRPMVIIMSMIMAIK 245


>gi|299537550|ref|ZP_07050844.1| hypothetical protein BFZC1_16075 [Lysinibacillus fusiformis ZC1]
 gi|298727111|gb|EFI67692.1| hypothetical protein BFZC1_16075 [Lysinibacillus fusiformis ZC1]
          Length = 255

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 99/269 (36%), Gaps = 26/269 (9%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  D  V+ + ++I+  FL+  +  + G GGGL+ +P L       G+  S     A+ T
Sbjct: 1   MPFDLDVNILLILILFGFLAAFIDSVVG-GGGLISLPALMFV----GLPPST----AVAT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S+ S +   R G +++K +      +   +++ + ++  +D S L     I 
Sbjct: 52  NKLAGTMGSLTSTVTFYRSGKLDIKAVYKLFPFVFFGSMLGAWIVHLMDPSVLKPLMLIM 111

Query: 134 CLLMGILMLKRDRLYC-----ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
              + I  + +          +     + +      + GF  G LG G G F     L  
Sbjct: 112 LAAVAIYTIFKKDWGSMTTYKQLTPKRSIIFVFVITLIGFYDGFLGPGTGSFLLFAFLLV 171

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
           G    ++   +  ++      ALL+ IY            LG +N    L +    I   
Sbjct: 172 GFDFLQSAGNAKFLNFGSNVAALLMFIY------------LGQINYAYGLPMGLAQIAGA 219

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + +K +   G  Y+   F ++       
Sbjct: 220 IVGSKFAIKRGSGYVRKLFIVVTILLLLK 248


>gi|253700338|ref|YP_003021527.1| hypothetical protein GM21_1715 [Geobacter sp. M21]
 gi|251775188|gb|ACT17769.1| protein of unknown function DUF81 [Geobacter sp. M21]
          Length = 254

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 94/260 (36%), Gaps = 25/260 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y+ L+ V    +G +  + G GGGL+ VPVL            +    A+GT+    +  
Sbjct: 8   YLPLLFVTGAGAGLIDSIAG-GGGLITVPVLLGL--------GLSPQAALGTNKLQGSFG 58

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + +   + GT+ +              ++ S  +  +D  FL K      L +    
Sbjct: 59  SFSAMVHFVQAGTVKLSDAAAGAAWTAAGAILGSYTVQQLDPGFLKKGIPFLLLAILCYT 118

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           +   RL  E    + P        G+  GF  G LG G G F  + LML  G  + K T 
Sbjct: 119 IFTPRLGAEEVHPRLPRGLFYAAAGLALGFYDGFLGPGTGSFWVMALMLGLGFDMRKGTG 178

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +   + +    +L V +  G             V + A L++     +   +  +L   
Sbjct: 179 YTKVFNFVSNIVSLAVFLAGGE------------VLLLAGLVMGAGQAVGARVGARLVIR 226

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
            G +++   F   +   +  
Sbjct: 227 KGTRFVRPVFICSVLAVTAK 246


>gi|239832195|ref|ZP_04680524.1| Protein of unknown function DUF81 [Ochrobactrum intermedium LMG
           3301]
 gi|239824462|gb|EEQ96030.1| Protein of unknown function DUF81 [Ochrobactrum intermedium LMG
           3301]
          Length = 261

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 92/252 (36%), Gaps = 27/252 (10%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F++G +  + G GGG++ +P L     L GI        A+GT+       S  + + + 
Sbjct: 17  FIAGIIDSIAG-GGGMITIPALL----LAGIPPVE----ALGTNKLQGLFGSSSATIAYA 67

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           R G +N++          I +V  +L+ + +    +  A  I  + + +    +  L   
Sbjct: 68  RKGHVNIREQWPEALASLIGSVFGALLATVLPVDIMRAALPILLIAIAVYFAVKPSLGDV 127

Query: 151 RKFPDNYVKYIWGM----VTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSAL 205
            +    +  +++G+    + GF  G  G G G  F    +   G  + KATA +  ++  
Sbjct: 128 DRA-RRFGPFLFGVTLVPLIGFYDGLFGPGTGSFFMLAFVALAGFGVLKATAHTKLLNCA 186

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
               + +     G             +N    + +     +   +   L+  +G + +  
Sbjct: 187 SNVGSFVTFALVGT------------INWKIGICMGIAQFIGAQIGASLAMKVGSRIIKP 234

Query: 266 GFSMIMFTTSFV 277
              ++    +  
Sbjct: 235 LLVVVSLALAVR 246



 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 13/116 (11%)

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            + G +    G GGG+ T   +L  G    +A  T+       +  A +           
Sbjct: 17  FIAGIIDSIAG-GGGMITIPALLLAGIPPVEALGTNKLQGLFGSSSATIAYARK------ 69

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                 G VNI         S++ +     L+ ++    +     +++   +  FA
Sbjct: 70  ------GHVNIREQWPEALASLIGSVFGALLATVLPVDIMRAALPILLIAIAVYFA 119


>gi|255654842|ref|ZP_05400251.1| hypothetical protein CdifQCD-2_03897 [Clostridium difficile
           QCD-23m63]
 gi|296449585|ref|ZP_06891362.1| permease [Clostridium difficile NAP08]
 gi|296878092|ref|ZP_06902107.1| permease [Clostridium difficile NAP07]
 gi|296261649|gb|EFH08467.1| permease [Clostridium difficile NAP08]
 gi|296430845|gb|EFH16677.1| permease [Clostridium difficile NAP07]
          Length = 128

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 55/116 (47%), Gaps = 7/116 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +    +G ++G+FG GGG ++VP+L+   +       +  H +  T+L +I   +  S +
Sbjct: 20  IIGVFTGFINGVFGSGGGTLLVPILNDIVK-------VEEHKSHATALSIIIFLTTTSSV 72

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   GT ++ +         +  ++ + +++ V   FL  +F I  ++  + M+ 
Sbjct: 73  LYVSKGTYDVNLTIKVAVGSILGGIIGAKLLNKVTGKFLRISFGIIMIIAALRMVF 128



 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 13/124 (10%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVR 214
           N    I G+ TGF++G  G GGG     ++        +K+ AT+  +   +   + ++ 
Sbjct: 15  NLKNTIIGVFTGFINGVFGSGGGTLLVPILNDIVKVEEHKSHATALSIIIFLTTTSSVLY 74

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +  G     L             + +   SIL   +  KL   +  K+L I F +IM   
Sbjct: 75  VSKGTYDVNL------------TIKVAVGSILGGIIGAKLLNKVTGKFLRISFGIIMIIA 122

Query: 275 SFVF 278
           +   
Sbjct: 123 ALRM 126


>gi|52144382|ref|YP_082446.1| hypothetical protein BCZK0842 [Bacillus cereus E33L]
 gi|51977851|gb|AAU19401.1| conserved hypothetical protein; possible membrane protein [Bacillus
           cereus E33L]
          Length = 255

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRLYCERKFPDNYVKYIWG-----MVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +              +++          GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIVFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNVGALLMFMYVG 201


>gi|325104727|ref|YP_004274381.1| protein of unknown function DUF81 [Pedobacter saltans DSM 12145]
 gi|324973575|gb|ADY52559.1| protein of unknown function DUF81 [Pedobacter saltans DSM 12145]
          Length = 316

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 95/260 (36%), Gaps = 22/260 (8%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +    ++   F +  + G  G+G G++     +      G   ++      G+       
Sbjct: 67  EQFLFMLAVGFFAQMVDGALGMGYGVIS----TTMLLSGGFSPAVI----SGSIHTAEMF 118

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD---KSFLNKAFAIFCLLM 137
           +S  S   H + G +N K+ K  +    I  V+ +L++ +VD     ++    +++  ++
Sbjct: 119 SSGASGFSHYKFGNVNRKLFKTLLIPGVIGAVLGALLLGYVDEAYAGYIRPIISVYTFIL 178

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           GI +L +       K              GFL    G G G      ++  G S      
Sbjct: 179 GIRILSQAFKKANSKPKKVKRAGWLAGAGGFLDSFGGGGWGPLVTSTLISKGRSPRYVIG 238

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           + +     +   + L                LG  ++ +++ ++   +L  PLA KL   
Sbjct: 239 SVSLTEFFVTMASALTFFVI-----------LGTSHLESIIGLILGGLLAAPLAAKLVGK 287

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           +  K + IG  +I+  +S  
Sbjct: 288 LPLKKMLIGVGVIVLISSLR 307


>gi|297567013|ref|YP_003685985.1| hypothetical protein Mesil_2628 [Meiothermus silvanus DSM 9946]
 gi|296851462|gb|ADH64477.1| protein of unknown function DUF81 [Meiothermus silvanus DSM 9946]
          Length = 252

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 87/230 (37%), Gaps = 15/230 (6%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL                +A+  SL ++   +++  + +     ++ K +  +     
Sbjct: 27  VPVLVYLV-------GEPDKLAVAESLAIVGIIALVGSLPYALRALVDWKSVVVFGIPGV 79

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           + T   + +   V        FA+  LL   +M +   L+  R+    +   + GM  G 
Sbjct: 80  VGTYAGAWLSQFVSGGVQLGLFAVVMLLAAFIMARPKGLHVPRRSGAIWKTGLEGMAVGA 139

Query: 169 LSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           ++G +GVGGG      ++   G  ++ A  TS  V AL +       ++       LP  
Sbjct: 140 IAGLVGVGGGFLIVPALVLLGGLPMHLAVGTSLLVIALNSAGGFYKYLHL------LPAL 193

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            L  V+   VL+   + I  + L  ++   I +  L  GF+  +      
Sbjct: 194 GL-TVHWDLVLLFSALGIGGSFLGGRIGVRIPQDVLRRGFAGFLVLMGLY 242



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 12/127 (9%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +     G ++GL GVGGG ++VP L            + MH+A+GTSL VIA  S   F 
Sbjct: 132 LEGMAVGAIAGLVGVGGGFLIVPALVLL-------GGLPMHLAVGTSLLVIALNSAGGFY 184

Query: 88  EHRRHG-----TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++         T++  ++  +  +    + +   +   + +  L + FA F +LMG+ + 
Sbjct: 185 KYLHLLPALGLTVHWDLVLLFSALGIGGSFLGGRIGVRIPQDVLRRGFAGFLVLMGLYIF 244

Query: 143 KRDRLYC 149
            +     
Sbjct: 245 WQSLPKL 251


>gi|229028148|ref|ZP_04184290.1| integral membrane protein [Bacillus cereus AH1271]
 gi|228733166|gb|EEL84006.1| integral membrane protein [Bacillus cereus AH1271]
          Length = 256

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +  +  I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSLQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLPPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G ++ KI+   I +  I  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAIYFIRSGKVDFKIVGKLIPLTIIGAVAGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 CIAIYIIVKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|328476069|gb|EGF46779.1| hypothetical protein AAULR_00525 [Lactobacillus rhamnosus MTCC
           5462]
          Length = 248

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 70/199 (35%), Gaps = 13/199 (6%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +  S      +  +    ++  G ++ ++         +  ++   +   +  S++    
Sbjct: 50  LAFSFLAFIISGWLGSRHYQHEGLMDRRVAYLLSGGSFVGAIIGVRLNLLLPTSWVQFLL 109

Query: 131 AIFCLLMGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
            +  LL GI +L + R   +          +  I G+VTG +    G GG +    L++ 
Sbjct: 110 YLVVLLSGIAILIQQRHPPKPGVDHLNQPVLLVILGVVTGLICALSGAGGPVLVMPLLVL 169

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
            G   + A   +   S  I+ PA +  +     +  LP           + II+    + 
Sbjct: 170 LGCEPHAAVGIALLNSVFISLPAAVGYLSQVQFMTTLPL----------LAIIIVTHGIG 219

Query: 248 TPLATKLSYMIGKKYLTIG 266
             + +++   I  + L   
Sbjct: 220 VIVGSRIGPKIDGRLLKTA 238


>gi|49479911|ref|YP_034628.1| integral membrane protein [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|49331467|gb|AAT62113.1| conserved hypothetical protein, possible integral membrane protein
           [Bacillus thuringiensis serovar konkukian str. 97-27]
          Length = 256

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 78/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLPPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G ++ KI+   I +  I  VV +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAIYFIRSGKVDFKIVGKLIPLTVIGAVVGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|325968834|ref|YP_004245026.1| permease [Vulcanisaeta moutnovskia 768-28]
 gi|323708037|gb|ADY01524.1| putative permease [Vulcanisaeta moutnovskia 768-28]
          Length = 279

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 57/274 (20%), Positives = 98/274 (35%), Gaps = 33/274 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L IV+  L G   GL G GG ++ VP+      L  I D    H+A+GT+   +   + 
Sbjct: 11  VLSIVSGILVGFSLGLIGGGGSILAVPLFLYFVGLDTIPD--AAHIAIGTTALAVGLNAY 68

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++   H +   +  ++   +  V  + +++ + +      + L   FAI  +++GI M  
Sbjct: 69  INSYMHLKKKNVAPRVGGIFAGVGLVGSLIGAYLGHITPGTDLLTYFAIAMIVLGIYMAI 128

Query: 144 RDRLYCE-------------RKFPDNYVKYI-----WGMVTGFLSGALGVGGGIFTNLLM 185
           R                   +K P      I     +G + G +SG  G+GGG      +
Sbjct: 129 RRESTQAGTADEVNHVMNALKKCPRLTTLTILKVATFGFIVGLVSGYFGIGGGFLIVPSL 188

Query: 186 LFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +F  G  I +A  TS          +                W  G V I   L+ +   
Sbjct: 189 MFSAGLCITRAIGTSLLSVGTFGVASGAEY------------WYYGDVLILIALLYVAGG 236

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                  T L+    K+ L I +  I+       
Sbjct: 237 AAGGYAGTSLAVKAPKRALRIAYGAIIVLVGIYM 270



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 7/122 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  +    F+ G +SG FG+GGG ++VP L            +C+  A+GTSL  +    
Sbjct: 159 ILKVATFGFIVGLVSGYFGIGGGFLIVPSLMF-------SAGLCITRAIGTSLLSVGTFG 211

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V S  E+  +G + + I   ++          + +     K  L  A+    +L+GI ML
Sbjct: 212 VASGAEYWYYGDVLILIALLYVAGGAAGGYAGTSLAVKAPKRALRIAYGAIIVLVGIYML 271

Query: 143 KR 144
            R
Sbjct: 272 MR 273


>gi|13541475|ref|NP_111163.1| permease [Thermoplasma volcanium GSS1]
 gi|14324859|dbj|BAB59785.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 278

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 51/280 (18%), Positives = 95/280 (33%), Gaps = 42/280 (15%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              I++  L G   GL G GG ++ +P+L     +         H+ +GT+   +   ++
Sbjct: 9   IYSIISGVLVGFSLGLIGGGGSILAIPLLIYFVGIRDP------HLVIGTTALAVGINAL 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++   H R   +N KI   +     I  ++ + +        L   F+   + +G+ M  
Sbjct: 63  INVYSHLRKKNVNFKIGTAFTVFGVIGVLIGTTLGLITPGGELLFLFSFLMIAIGLYMFL 122

Query: 144 RD-----------------------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
                                         RK    +  YI+G++ GF SG  G+GGG  
Sbjct: 123 TKCRTCKNFDALPKDDPPDPPDDPVHFSNIRKKFGQFKVYIFGLLAGFASGYFGIGGGFL 182

Query: 181 TNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
               +L+    ++  A  TS            L    +G             V +   L+
Sbjct: 183 IVPALLYSADITMNIAVGTSLLSVGTFGLVTALRYGIAGE------------VLVPIALL 230

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +   I       ++S  + +  L   FS+I+       A
Sbjct: 231 YVLGGIFGGFAGARVSTSMKRSTLRRFFSIIIVVVGIYMA 270


>gi|261313116|ref|ZP_05952313.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261302142|gb|EEY05639.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
          Length = 306

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 88/273 (32%), Gaps = 56/273 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G LSGLFGVGG  ++ P+L           +I   +A+ T    +  +S
Sbjct: 14  MLVLLGMGAAVGFLSGLFGVGGSFLITPLLIFY--------NIPPAIAVATGANQVIASS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
           V   + H +  T+++K+    +    + +++   + S +         ++  +  F   +
Sbjct: 66  VSGALAHFKRRTLDIKLGLFLVAGGILGSLIGIFVFSWLRDLGQLDLIVSILYVFFLGTI 125

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R      +         G   
Sbjct: 126 GGLMLVESVQALRRAKKGQGGAVRRSGQHTWIHRLPFKMRFRASTIYVSVIPVLGIGFFI 185

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G LS  +GVGGG      +++           TS      +     +++  +        
Sbjct: 186 GLLSSVMGVGGGFIMVPALIYLLHVPTNVVVGTSLFQITFVTAFTTVMQATTNQS----- 240

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 ++I    +++   ++      +    +
Sbjct: 241 ------IDIVLAFLLMVGGVIGAQYGARAGRKL 267



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 8/103 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-T 81
           +  ++   F  G LS + GVGGG +MVP L            +  +V +GTSL  I   T
Sbjct: 175 VIPVLGIGFFIGLLSSVMGVGGGFIMVPALIYLLH-------VPTNVVVGTSLFQITFVT 227

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +  + M+   + +I++ +    +    I     +     +   
Sbjct: 228 AFTTVMQATTNQSIDIVLAFLLMVGGVIGAQYGARAGRKLRGE 270


>gi|227489244|ref|ZP_03919560.1| protein of hypothetical function DUF81 [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227090775|gb|EEI26087.1| protein of hypothetical function DUF81 [Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 298

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 71/238 (29%), Gaps = 16/238 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +  FL+  + G  G+G G     +L     L     S  +HVA          T+ 
Sbjct: 4   IIVAITGFLAQLVDGGLGMGFGATSTTLLITLAALTPAHASAVVHVAE-------LGTTA 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +S   H R G ++++          +   + +L+++ +    +         L  +    
Sbjct: 57  VSGFSHWRFGNVDLRQALWLGIPGGVGAFIGALLLTSITSPVVTAVILTGLGLNVMRRFA 116

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGV 202
           R                  G   G +    G G G + ++ ++  +     +   T    
Sbjct: 117 RRHQKPTAGTHSRSFLTGLGFFGGLIDATGGGGWGPVTSSTMLTLHKQDPRRIVGTVNTA 176

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
             L+   A    I   W                 +L +L    +  PLA  +      
Sbjct: 177 EFLVTASATAGFIVGLWEELLAT--------WPLILALLIGGSIAAPLAAWIVSRFNP 226


>gi|77459951|ref|YP_349458.1| hypothetical protein Pfl01_3729 [Pseudomonas fluorescens Pf0-1]
 gi|77383954|gb|ABA75467.1| putative membrane protein [Pseudomonas fluorescens Pf0-1]
          Length = 261

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 49/273 (17%), Positives = 98/273 (35%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++A  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   LVIAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPAT----AVGTDLLYAAITKSSG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + HR++  I+  I             +T   +S +        + + +A         +
Sbjct: 60  VLVHRKNKNIDWAITGWLTLGSVPAVAMTLWFLSTLHTAPDAMNAIIKQALGFVLFATAL 119

Query: 140 LMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + RL                   N +  I G++ G +     +G G      L +L
Sbjct: 120 AILFKKRLLEFAHKRAGGNYNPSGARLNVMTVITGLILGTMVALTSIGAGALGTVALFIL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +              + GL   S+G ++ G +  +L  S+ 
Sbjct: 180 YPLLPTRRLVGTEIAHAVPLTL------------VAGLGHASMGNMDWGVLGFLLVGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + L+  +  + L    + ++    +  A
Sbjct: 228 GIWLGSHLTGRVSDELLRPCLATMLVLIGYKLA 260



 Score = 40.8 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 29/57 (50%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
           N+   I G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 5   NFGLVIAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSSGVL 61



 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            + ++   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 148 VMTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G ++  +L   +        + S +   V    L    A   +L+G  +  
Sbjct: 202 VAGLGHASMGNMDWGVLGFLLVGSLPGIWLGSHLTGRVSDELLRPCLATMLVLIGYKLAF 261


>gi|307942571|ref|ZP_07657919.1| inner membrane protein YfcA [Roseibium sp. TrichSKD4]
 gi|307774210|gb|EFO33423.1| inner membrane protein YfcA [Roseibium sp. TrichSKD4]
          Length = 271

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 93/255 (36%), Gaps = 27/255 (10%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
             D     +  + V +F++G +  + G GGGL+ +P L     + G+         +GTS
Sbjct: 11  EADLATHVLLFLFVVAFVAGFVDAIAG-GGGLIAIPALL----MTGLPPLEV----LGTS 61

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
                  S  + + + R G ++++ +     +     V+ +++ + +    L     +  
Sbjct: 62  KLQALFGSGSATIAYARQGHVDLRKIFPMAVISFCGAVLGAMVATILPIDVLRAGLPVIL 121

Query: 135 LLMGILMLKRDRLYCERKFPDNYVKYIWGM----VTGFLSGALGVG-GGIFTNLLMLFYG 189
           + + I    +  +    + P     +++G+    + GF  G  G G G  F    +   G
Sbjct: 122 IAIAIYFAVKPDIGVVERHP-RLSLFVFGLTIVPLIGFYDGLFGPGTGSFFMFAFVSLAG 180

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             I KATA +  ++         V                G V     L++     +   
Sbjct: 181 FGILKATAHTKVLNFASNLGGFAVFFVG------------GAVIWKVGLLMALGQTIGAQ 228

Query: 250 LATKLSYMIGKKYLT 264
           L ++L+   G K + 
Sbjct: 229 LGSRLAMKNGSKIIR 243



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 42/121 (34%), Gaps = 13/121 (10%)

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            ++   V GF+    G GGG+     +L  G    +   TS   +   +  A +      
Sbjct: 22  LFVVAFVAGFVDAIAG-GGGLIAIPALLMTGLPPLEVLGTSKLQALFGSGSATIAYARQ- 79

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                      G V++  +  +  IS     L   ++ ++    L  G  +I+   +  F
Sbjct: 80  -----------GHVDLRKIFPMAVISFCGAVLGAMVATILPIDVLRAGLPVILIAIAIYF 128

Query: 279 A 279
           A
Sbjct: 129 A 129


>gi|296118797|ref|ZP_06837373.1| YtnM protein [Corynebacterium ammoniagenes DSM 20306]
 gi|295968286|gb|EFG81535.1| YtnM protein [Corynebacterium ammoniagenes DSM 20306]
          Length = 316

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 87/250 (34%), Gaps = 21/250 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +  I +A F +  + G  G+G G+    +L     L     S  +H A         
Sbjct: 1   MPTLIFIALAGFAAQLVDGGIGMGFGVTSTTLLIFLAGLGPAQASAVVHAAE-------L 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+++S   H R G ++ KI+        I   + + ++S++         +   +L+ I
Sbjct: 54  GTTLVSGFSHWRFGNVDWKIVFSLAIPGAIAAFIGATLLSNLSLEAAQPVTSALLVLIAI 113

Query: 140 LML-----KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS-IY 193
            ++        +     +          G V G +    G G G  T   ++  G     
Sbjct: 114 NLIWRFSRGNIKRTIANRPHATPFLVALGSVGGMVDATGGGGWGPVTTSTLMAAGRDKPR 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +   T +    L+   A++   +  W             ++GA++ +L    +  PLA  
Sbjct: 174 RIVGTVSAAEFLVTLGAIIGFAFGLWEDIVA--------HLGAIVAMLIGGSIAAPLAAW 225

Query: 254 LSYMIGKKYL 263
           +   +    L
Sbjct: 226 MVSRLNPIML 235


>gi|313895386|ref|ZP_07828943.1| putative membrane protein [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312976281|gb|EFR41739.1| putative membrane protein [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 252

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 88/232 (37%), Gaps = 26/232 (11%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            L+ +   + +H A+  +LG +A T++   + H R G +  +          +  ++ ++
Sbjct: 26  TLLVVGFGVPIHQALAVALGSMAFTTLSGAVSHYREGEVVPRTGFVIGAGGLVGALIGAV 85

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKR--------DRLYCERKFPDNYVKYIWGMVT-- 166
           + +H++   L+    +       L+  R          ++   +       YI+G +T  
Sbjct: 86  ISNHIESGNLSLFTGLMLESSAFLLYLRIYQSSWLEQHIHVRAELLTGRPLYIYGSLTGL 145

Query: 167 --GFLSGALGVGGGI-FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
             G L+GA G+G        LM+ +G  + +A  T+  +   I+    +  +  G     
Sbjct: 146 VCGILAGAFGIGSAAYIQIALMVVFGVPLLQAIGTTMMIIVPISISGGIGYLLYGQFEPV 205

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                   + +  ++ +   S        KL+++  +  L   F + + T  
Sbjct: 206 --------IFLQTLVALSVGSYF----GAKLTHLAPRAVL-RFFIVALPTVG 244



 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 46/122 (37%), Gaps = 7/122 (5%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
                 +   + G L+G FG+G    +   L   F        + +  A+GT++ +I P 
Sbjct: 136 LYIYGSLTGLVCGILAGAFGIGSAAYIQIALMVVF-------GVPLLQAIGTTMMIIVPI 188

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+   + +  +G     I    +  L + +   + +     ++ L         + G++M
Sbjct: 189 SISGGIGYLLYGQFEPVIFLQTLVALSVGSYFGAKLTHLAPRAVLRFFIVALPTVGGLIM 248

Query: 142 LK 143
           + 
Sbjct: 249 VL 250


>gi|298370073|ref|ZP_06981389.1| integral membrane protein [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281533|gb|EFI23022.1| integral membrane protein [Neisseria sp. oral taxon 014 str. F0314]
          Length = 259

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 93/265 (35%), Gaps = 24/265 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +   +++  F +G +    G GGGL+ +P L           S+       +  G +  
Sbjct: 8   SFFYYLLLIGFAAGLMDAAVG-GGGLLQIPGLFNLLPNATPVASVMGINKFASCCGTLTA 66

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T      ++ R  ++  K+L     +    + + +  +++    ++  A  +  + M + 
Sbjct: 67  TG-----QYLRRISVPWKMLLPAAVLAFAASYLGANAVAYFPVQYMKSAMLVIMIAMCLY 121

Query: 141 MLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYK 194
              +  L    +         +    +G + GF  G  G G G     + + FYG     
Sbjct: 122 TFLKKDLGQAVRTEKLTRRETWWGLFFGALIGFYDGIFGPGTGSLLAFVFVRFYGYDFLT 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A A    +++     AL   I              G V     + +   ++    +  +L
Sbjct: 182 ANAAGKVINSTTNLAALTFFIPQ------------GHVVWAWAVPLALANLCGGVVGARL 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVFA 279
           +   G ++L  GF +++  T   FA
Sbjct: 230 AIRGGTRFLRYGFMLLLCLTIGKFA 254


>gi|206968565|ref|ZP_03229521.1| putative membrane protein [Bacillus cereus AH1134]
 gi|206737485|gb|EDZ54632.1| putative membrane protein [Bacillus cereus AH1134]
          Length = 256

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 78/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           ++     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   EELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLSPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S M   R G ++ KI+   I +  +  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAMYFIRSGKVDFKIVGKLIPLTIVGAVAGALVVKFIPSDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G     + L  G 
Sbjct: 113 FIAIYIIAKKNWGSVSTYKKMTQRKTLIFFFAILMIGFYDGFFGPGTGSLLIFVFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|33592356|ref|NP_880000.1| hypothetical protein BP1228 [Bordetella pertussis Tohama I]
 gi|33602241|ref|NP_889801.1| hypothetical protein BB3265 [Bordetella bronchiseptica RB50]
 gi|33572001|emb|CAE41524.1| putative membrane protein [Bordetella pertussis Tohama I]
 gi|33576680|emb|CAE33757.1| putative membrane protein [Bordetella bronchiseptica RB50]
 gi|332381772|gb|AEE66619.1| hypothetical protein BPTD_1218 [Bordetella pertussis CS]
          Length = 257

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 92/229 (40%), Gaps = 23/229 (10%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
             +G+   +   +A GT+L ++ PT +M+  ++ +H  I+M++         + T V + 
Sbjct: 33  PALGLLLGMPQQLAQGTALIMVLPTIMMAVRKYHQHARIDMRVAGAGAAGAVVFTWVGAQ 92

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRD----------RLYCERKFPDNYVKYIWGMVT 166
           +   +    L  +FA+F   + +  + +                          + G++ 
Sbjct: 93  LALGIASRTLRLSFAVFLFFIALFYVYQTVRKRAAAAPAAPARPAPVLSPPRASVLGVLC 152

Query: 167 GFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G L G  GVGG +    ++   +      A A +  +    +  AL+   ++G       
Sbjct: 153 GTLGGFFGVGGAVLAVPIITSVFRLPQTMAQALALTMVIPGSMIALVTYTWAGQA----- 207

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            W +G       + +   S++  P+  +L+Y + ++ L   F+ ++F T
Sbjct: 208 DWWIG-------VPLAAGSLVFVPVGVRLAYRLPERKLRACFAAMLFAT 249


>gi|30250485|ref|NP_842555.1| hypothetical protein NE2566 [Nitrosomonas europaea ATCC 19718]
 gi|30139326|emb|CAD86478.1| Domain of unknown function DUF81 [Nitrosomonas europaea ATCC 19718]
          Length = 277

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 96/280 (34%), Gaps = 42/280 (15%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++   L I+    +G + GL G GG ++ VP+L  +      + +    +++  S  V  
Sbjct: 1   MEIQWLAILPGVFTGLVLGLTGSGGAIIAVPLLVFSLHTTIAEAAPVALLSIAVSAAVAT 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             + M        G +  +          +       +   +    L   F+        
Sbjct: 61  CNAFM-------QGIVRYRAAALIASTGMLVAPAGIWIARQLPDLLLTVVFSAVLAFAAG 113

Query: 140 LMLKRDRLYCERKFPDNY----------------------VKYIWGMVTGFLSGALGVGG 177
            M ++ R   +   P+                             G+ TGFLSG LGVGG
Sbjct: 114 YMYRQGRRSAQPAPPEEAVYPPCQLSLESGRLIWTIPCAKGLLFSGVATGFLSGLLGVGG 173

Query: 178 GIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G  T   +       +   TAT+  ++ LI+   ++               S+GF+N   
Sbjct: 174 GFITIPALRKVSNLPMQSLTATALAITTLISITGVVSAT------------SMGFMNWPL 221

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            L     +++ T    + ++   +  L  GF+++ +  S 
Sbjct: 222 ALPFTVGTVIGTLTGRRYAHRFDEAKLQYGFAILAWCISL 261



 Score = 40.4 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 30/82 (36%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
            ++ M     T+L +    S+   +     G +N  +   +     I T+         D
Sbjct: 185 SNLPMQSLTATALAITTLISITGVVSATSMGFMNWPLALPFTVGTVIGTLTGRRYAHRFD 244

Query: 123 KSFLNKAFAIFCLLMGILMLKR 144
           ++ L   FAI    + + M+ +
Sbjct: 245 EAKLQYGFAILAWCISLGMIVK 266


>gi|327480851|gb|AEA84161.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 261

 Score = 65.9 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 94/263 (35%), Gaps = 25/263 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++   +F++G +  + G GGGL+ +P L  A         +  H+ +GT+      
Sbjct: 12  STLAILFAVAFIAGFIDAIAG-GGGLLTIPALLTA--------GLPPHLVLGTNKLSATF 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +     R       + +  +    I   V +L+   +  S+LN+   +     GI 
Sbjct: 63  GSATASYTFYRRRLFEPVVWRRALIGTAIGAAVGALLAQFMPASWLNQLLPLVVSACGIY 122

Query: 141 MLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
           +L      +   E        ++   +  GF  G  G G G F T   ML Y   + +A+
Sbjct: 123 LLFSKVPAKAAGEAAEIGRRRQWPQSLSLGFYDGVAGPGTGAFWTVSSMLLYPLDLLRAS 182

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++ +    AL V I              G V     + +    +       + + 
Sbjct: 183 GVARTMNFVSNAVALAVFIVG------------GHVAWVLGIGMGLALMTGAYFGARTAI 230

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G +++   F +++   S   A
Sbjct: 231 GGGSRFIRPVFILVVLAMSLRLA 253


>gi|283955181|ref|ZP_06372683.1| putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793394|gb|EFC32161.1| putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 261

 Score = 65.9 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 68/181 (37%), Gaps = 13/181 (7%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           LFG+GGG+++VP +               H A+G S+  +   +V     + R   +N+K
Sbjct: 21  LFGIGGGMIIVPSMFAL--------GASAHHAIGISVLQMIFAAVFGSYINYRKKNLNLK 72

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD--- 155
                 F   I    + +++  +    L   F     +  I      +    +       
Sbjct: 73  DGIMIGFGGLIGASFSGMLLKALSDVALTSIFLTVSCIFFIKYAFEIKGNIVKNQRSVWV 132

Query: 156 -NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
            N + +I G  TG  + +LG+GGG+    ++ ++ G    K  + S       +   ++ 
Sbjct: 133 KNVILFIAGAFTGIFAISLGIGGGLLIAPILAYFLGYDSKKVVSLSLFFVIFASVSGIIS 192

Query: 214 R 214
            
Sbjct: 193 F 193


>gi|253997285|ref|YP_003049349.1| hypothetical protein Mmol_1919 [Methylotenera mobilis JLW8]
 gi|253983964|gb|ACT48822.1| protein of unknown function DUF81 [Methylotenera mobilis JLW8]
          Length = 343

 Score = 65.9 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 87/191 (45%), Gaps = 12/191 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I +A+ L+ ++S + G G GL+++P+L  A     I  +    +++GTS+  +   S+  
Sbjct: 6   IFIAALLAFSISVICGGGAGLLLIPILGYALPASQIPAA----LSIGTSVNSVTKLSLFY 61

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
                    IN  I++ ++        + + ++S++D +++    AIF +     + +++
Sbjct: 62  S-------KINWHIVRLFLPAALPGVALGAWLLSYLDPTYVELCMAIFLVSNLPYLFRKE 114

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
            +   +    N      G++ GF+SG  G  G +  N + L YG    +  AT A    L
Sbjct: 115 TVANAKPNYSNQFLRAIGLLAGFISGLTGAVG-VLFNGVYLRYGLVKTEIVATRAANEIL 173

Query: 206 IAFPALLVRIY 216
           +    L +  Y
Sbjct: 174 LHIIKLFLYAY 184


>gi|153811667|ref|ZP_01964335.1| hypothetical protein RUMOBE_02059 [Ruminococcus obeum ATCC 29174]
 gi|149832408|gb|EDM87493.1| hypothetical protein RUMOBE_02059 [Ruminococcus obeum ATCC 29174]
          Length = 258

 Score = 65.9 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 104/267 (38%), Gaps = 25/267 (9%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++  + +   A   +G  +G  G+    V+ P+L      +G+D     ++A+G +L  
Sbjct: 2   QILWTVIVTFFAGMGAGLGTGFAGMSAAAVISPMLI---TFLGMDP----YMAVGIALSS 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
               S +S   + ++  +++K     +  +   TVV S + S V  + +         L+
Sbjct: 55  DVLASAVSAYVYGKNKNLDIKNGVIMMISVLTFTVVGSYVSSLVPSATMGNFSVFMTFLL 114

Query: 138 GILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGA 190
           GI  + R  +  +    +   K       + G++ GF+ G +G GGG+   L++    G 
Sbjct: 115 GIKFIVRPVMTTKESMQNVSAKKRVIQSIVCGVLIGFICGFIGAGGGMMMLLILTSVLGY 174

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            +  A  TS  + A  AF         G    G+P  ++        ++ +  + +   +
Sbjct: 175 ELKTAVGTSVFIMAFTAFTGAASHFAIG----GMPDVTV-------WILCIVFTFIWARI 223

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           A   +     K L     +I+     V
Sbjct: 224 AAVFANKASTKTLNRATGIILVVLGIV 250



 Score = 38.1 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 12/132 (9%)

Query: 9   SLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMH 68
           S+    +K  V+  I   ++  F+ G +    G GGG++M+ +L+             + 
Sbjct: 129 SMQNVSAKKRVIQSIVCGVLIGFICGFI----GAGGGMMMLLILTSVL-------GYELK 177

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDW-IFVLPITTVVTSLMISHVDKSFLN 127
            A+GTS+ ++A T+      H   G +    +    I    I   + ++  +      LN
Sbjct: 178 TAVGTSVFIMAFTAFTGAASHFAIGGMPDVTVWILCIVFTFIWARIAAVFANKASTKTLN 237

Query: 128 KAFAIFCLLMGI 139
           +A  I  +++GI
Sbjct: 238 RATGIILVVLGI 249


>gi|329937380|ref|ZP_08286938.1| Putative sulfate permease [Streptomyces griseoaurantiacus M045]
 gi|329303256|gb|EGG47143.1| Putative sulfate permease [Streptomyces griseoaurantiacus M045]
          Length = 320

 Score = 65.9 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 92/275 (33%), Gaps = 35/275 (12%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D+   +I++  L G   GL G+GGG +M P++   F   G++ +     A+G+ L    
Sbjct: 1   MDFSGPLILSGALVGLAVGLTGMGGGALMTPIMVMVF---GVNPTA----AIGSDLAASV 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFC 134
                  + H+R GT+   +++  +            ++  + +       +        
Sbjct: 54  FMKPFGAVVHQRAGTVRWDLVRWLLPTAVPAAFGGVFLLRALGEGEALQRHVKYVIGGAL 113

Query: 135 LLMGILMLKR--------DRLYCERKFPDNYV-KYIWGMVTGFLSGALGVGGGIFTNLLM 185
           LL  + ML R                 P   +     G++ G + G   VG G    +++
Sbjct: 114 LLAVLGMLVRMALDRRRGAAPDESGDVPVRPLATLGIGLLGGTVVGMTSVGSGSLIIVML 173

Query: 186 LFYGASIYKA--TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +     +       T    +  +   A L  +  G    GL               +L  
Sbjct: 174 MLAHPRLRANHLVGTDLVQAIPVVAAAALGHLVRGDADLGL------------AATLLVG 221

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +I    L  +LS  +    L     +++  +    
Sbjct: 222 AIPGVLLGARLSTRVTGPALRWALVVLLTGSGLSM 256



 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 44/116 (37%), Gaps = 6/116 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +    L GT+ G+  VG G +++ +L  A         +  +  +GT L    P    + 
Sbjct: 148 LGIGLLGGTVVGMTSVGSGSLIIVMLMLA------HPRLRANHLVGTDLVQAIPVVAAAA 201

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + H   G  ++ +    +       ++ + + + V    L  A  +     G+ ML
Sbjct: 202 LGHLVRGDADLGLAATLLVGAIPGVLLGARLSTRVTGPALRWALVVLLTGSGLSML 257


>gi|328949890|ref|YP_004367225.1| protein of unknown function DUF81 [Marinithermus hydrothermalis DSM
           14884]
 gi|328450214|gb|AEB11115.1| protein of unknown function DUF81 [Marinithermus hydrothermalis DSM
           14884]
          Length = 253

 Score = 65.9 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 76/231 (32%), Gaps = 18/231 (7%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L                +A+  SL ++   S+ + + + R G ++ + +  +     
Sbjct: 27  VPILVYLV-------GEPEKLAIAESLAIVGLISLAAALPYARKGLVDFRNVLWFGVPGM 79

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW--GMVT 166
             T + + +   V  +     FA   LL    M +  RL    + P  Y K       V 
Sbjct: 80  AGTYLGAFLSQFVSGALQLALFAFVMLLAARSMARPPRLEATPRAPRPYWKIALDGLGVG 139

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
                    GG +    L+L  G  +++A  TS  V AL +                   
Sbjct: 140 VLTGLVGVGGGFLIVPALVLLGGLPMHQAIGTSLVVIALKSAAGFYKYALLLPAQGYAMH 199

Query: 227 WS-LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           W  +G  ++             + L  +L+  + +  L  GF+  +     
Sbjct: 200 WELIGLFSLLGFAG--------SLLGGRLALRVPQASLRRGFAGFLVAMGA 242



 Score = 44.7 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 12/107 (11%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR-----RHGTINMKILKD 102
           +VP L            + MH A+GTSL VIA  S   F ++      +   ++ +++  
Sbjct: 153 IVPALVLL-------GGLPMHQAIGTSLVVIALKSAAGFYKYALLLPAQGYAMHWELIGL 205

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
           +  +    +++   +   V ++ L + FA F + MG L+L R+    
Sbjct: 206 FSLLGFAGSLLGGRLALRVPQASLRRGFAGFLVAMGALILVRNLPDL 252


>gi|47569952|ref|ZP_00240617.1| hypothetical protein membrane Spanning protein [Bacillus cereus
           G9241]
 gi|52144938|ref|YP_081890.1| integral membrane protein [Bacillus cereus E33L]
 gi|118476057|ref|YP_893208.1| integral membrane protein [Bacillus thuringiensis str. Al Hakam]
 gi|225862346|ref|YP_002747724.1| hypothetical protein BCA_0381 [Bacillus cereus 03BB102]
 gi|228983549|ref|ZP_04143754.1| integral membrane protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229154061|ref|ZP_04282186.1| integral membrane protein [Bacillus cereus ATCC 4342]
 gi|229194682|ref|ZP_04321475.1| integral membrane protein [Bacillus cereus m1293]
 gi|300118927|ref|ZP_07056638.1| hypothetical protein BCSJ1_19928 [Bacillus cereus SJ1]
 gi|47553398|gb|EAL11784.1| hypothetical protein membrane Spanning protein [Bacillus cereus
           G9241]
 gi|51978407|gb|AAU19957.1| conserved hypothetical protein; possible integral membrane protein
           [Bacillus cereus E33L]
 gi|118415282|gb|ABK83701.1| possible integral membrane protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|225790497|gb|ACO30714.1| putative membrane protein [Bacillus cereus 03BB102]
 gi|228588785|gb|EEK46810.1| integral membrane protein [Bacillus cereus m1293]
 gi|228629341|gb|EEK86043.1| integral membrane protein [Bacillus cereus ATCC 4342]
 gi|228776145|gb|EEM24506.1| integral membrane protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|298723543|gb|EFI64274.1| hypothetical protein BCSJ1_19928 [Bacillus cereus SJ1]
          Length = 256

 Score = 65.9 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 77/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLPPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G ++ KI+   I +  I  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAIYFIRSGKVDFKIVGKLIPLTVIGAVAGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|302348582|ref|YP_003816220.1| Predicted permease [Acidilobus saccharovorans 345-15]
 gi|302328994|gb|ADL19189.1| Predicted permease [Acidilobus saccharovorans 345-15]
          Length = 251

 Score = 65.9 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 90/261 (34%), Gaps = 27/261 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +++     G L+G+ G  G L++VP LS           +    ++G+SL V   T+
Sbjct: 4   LYALVLIGVAVGALTGITGSSGVLIVVPALSYL--------GLSFKDSIGSSLLVDVITT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                 +  H  +++K          +   V S +        L  AF+ F   M  +  
Sbjct: 56  TSVIYVYFTHRNVDVKKAVLIGLGAVLGAQVGSAIAFRAPVRALEIAFSTFTAYMAYVSF 115

Query: 143 KRDRLYCERKFPDNYVKYIW------GMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           +R +            +  +        V G ++G LG  GGI    ++ML +   + + 
Sbjct: 116 RRSKSPSLNVRSLGLGRAAYVLAPALSFVVGLVTGTLGASGGIMFIAIMMLLFSMEVKRM 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T+     + A       I  G               + A +II  +++L      +L+
Sbjct: 176 IGTATLAMFMSAASGAEAYIADGMSD------------VMASVIIGVVAMLSGIYFARLA 223

Query: 256 YMIGKKYLTIGFSMIMFTTSF 276
             +    +      +   T+ 
Sbjct: 224 NRMKSSTIYKFLGSVFVLTTI 244


>gi|256113857|ref|ZP_05454650.1| hypothetical protein Bmelb3E_13850 [Brucella melitensis bv. 3 str.
           Ether]
 gi|265995206|ref|ZP_06107763.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|262766319|gb|EEZ12108.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
          Length = 261

 Score = 65.9 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 100/259 (38%), Gaps = 27/259 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+  A+F++G +  + G GGG++ +P L     L GI        A+GT+       S 
Sbjct: 10  LLLTAAAFIAGIIDSIAG-GGGMITIPALL----LAGIPPVE----ALGTNKLQGLFGSS 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + R G +N+           + +V+++L+ + +  + +  A  +  + + I    
Sbjct: 61  SATIAYARKGHVNILQQWPEALASLLGSVLSALLATVLPVNIMRAALPMLLIAIAIYFAL 120

Query: 144 RDRLYCERKFPDNYVKYIWGM----VTGFLSGALGVG-GGIFTNLLMLFYGASIYKATAT 198
           +  L    +       +++G+    + GF  G  G G G  F    + F G  + KATA 
Sbjct: 121 KPSLGDVDRA-RRIGPFLFGVTLVPLIGFYDGLFGPGTGSFFMLAFVAFAGYGVLKATAH 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++       L                ++G +N    + +     +   +  +L+  I
Sbjct: 180 TKLLNCASNIGGLATFA------------AVGVINWKIGISMGIAQFIGAQIGARLAMKI 227

Query: 259 GKKYLTIGFSMIMFTTSFV 277
           G + +     +I    +  
Sbjct: 228 GSRIIKPLLIVISLALAGR 246



 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 41/124 (33%), Gaps = 13/124 (10%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
             +      + G +    G GGG+ T   +L  G    +A  T+       +  A +   
Sbjct: 9   TLLLTAAAFIAGIIDSIAG-GGGMITIPALLLAGIPPVEALGTNKLQGLFGSSSATIAYA 67

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                         G VNI         S+L + L+  L+ ++    +     M++   +
Sbjct: 68  RK------------GHVNILQQWPEALASLLGSVLSALLATVLPVNIMRAALPMLLIAIA 115

Query: 276 FVFA 279
             FA
Sbjct: 116 IYFA 119


>gi|324324307|gb|ADY19567.1| hypothetical protein YBT020_01575 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 256

 Score = 65.9 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 77/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLPPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G ++ KI+   I +  I  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAIYFIRSGKVDFKIVGKLIPLTVIGAVAGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|313496865|gb|ADR58231.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 263

 Score = 65.9 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 92/249 (36%), Gaps = 25/249 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + ++ L+ + + ++G    + G GGGL+ +PVL  A    G++       A+ T+    A
Sbjct: 6   LTFVLLLALVALMAGFFDAIAG-GGGLITLPVLFIA----GVEPLA----AIATNKFQAA 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +V +     R G I+ +       +  I   + +L I++V KS L        +L+  
Sbjct: 57  SATVSATCAFARKGMIDWRRGSPMAVMAFIGGALGALSITYVPKSVLQACVPPLLILIAA 116

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
                 +      + K   +        + GF  G  G G G  F    ++  G  + +A
Sbjct: 117 YFAFSPKPNEQARKAKVSTSLFCVTAAPIIGFYDGIFGPGVGSFFMLACVVLLGQHLIQA 176

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TS  ++A     AL V   S            G +     L +   + +   L  + +
Sbjct: 177 VCTSKLLNAACNLGALSVFSLS------------GAIIWPLALAMALAAFMGAQLGARCA 224

Query: 256 YMIGKKYLT 264
              G + + 
Sbjct: 225 VRFGSRLIK 233


>gi|228963389|ref|ZP_04124550.1| integral membrane protein [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228796283|gb|EEM43730.1| integral membrane protein [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 256

 Score = 65.9 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           ++     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   EELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLSPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S M   R G ++ KI+   I +  +  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAMYFIRSGKVDFKIVGKLIPLTIVGAVAGALVVKFIPSDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKNWGSVSTYKKMTQRKTLIFFFAILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|253583632|ref|ZP_04860830.1| membrane protein [Fusobacterium varium ATCC 27725]
 gi|251834204|gb|EES62767.1| membrane protein [Fusobacterium varium ATCC 27725]
          Length = 276

 Score = 65.9 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 99/270 (36%), Gaps = 27/270 (10%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  L +   +     + VA F +  +  + G GGGL+ +P              +  HVA
Sbjct: 1   MFGLMEGMDLSGFIFLGVACFFAAFIDAIAG-GGGLISLPAFLA--------SGLPAHVA 51

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+      +++ S  +  + G IN +++K       I  V+    +  +D  +L    
Sbjct: 52  LGTNKVAACCSTIASSAKFAQSGKINWQLMKKLAIFSFIGAVLGVKTVVMIDSKYLYPIA 111

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVGGGIFTNLLM 185
            +  +++ +  L+   L  E +F            +     GF  G  G G G F    M
Sbjct: 112 IVLLIMVLLYTLRNKNLGEENRFEGLNGTNVKWGIVMAFALGFYDGFFGPGTGSFLIFAM 171

Query: 186 LF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +  +      A+  +  ++      ++++ +            S+G V       +  I 
Sbjct: 172 IRIFKIDFTNASGNAKILNLSSNVASVIMFV------------SMGKVAYIYSFSMAAIM 219

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           ++   +  K++   G K++   F ++    
Sbjct: 220 VVGAIIGAKMAVTKGTKFIKPMFLIVTTIV 249


>gi|33596466|ref|NP_884109.1| hypothetical protein BPP1841 [Bordetella parapertussis 12822]
 gi|33566235|emb|CAE37143.1| putative membrane protein [Bordetella parapertussis]
          Length = 257

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 92/229 (40%), Gaps = 23/229 (10%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
             +G+   +   +A GT+L ++ PT +M+  ++ +H  I+M++         + T V + 
Sbjct: 33  PALGLLLGMPQQLAQGTALIMVLPTIMMAVRKYHQHARIDMRVAGAGAAGAVVFTWVGAQ 92

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRD----------RLYCERKFPDNYVKYIWGMVT 166
           +   +    L  +FA+F   + +  + +                          + G++ 
Sbjct: 93  LALGIVSRTLRLSFAVFLFFIALFYVYQTVRKRAAAAPAAPARPAPVLSPPRASVLGVLC 152

Query: 167 GFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G L G  GVGG +    ++   +      A A +  +    +  AL+   ++G       
Sbjct: 153 GTLGGFFGVGGAVLAVPIITSVFRLPQTMAQALALTMVIPGSMIALVTYTWAGQA----- 207

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            W +G       + +   S++  P+  +L+Y + ++ L   F+ ++F T
Sbjct: 208 DWWIG-------VPLAAGSLVFVPVGVRLAYRLPERKLRACFAAMLFAT 249


>gi|292488898|ref|YP_003531785.1| inner membrane protein YfcA [Erwinia amylovora CFBP1430]
 gi|292900042|ref|YP_003539411.1| membrane protein [Erwinia amylovora ATCC 49946]
 gi|291199890|emb|CBJ47014.1| putative membrane protein [Erwinia amylovora ATCC 49946]
 gi|291554332|emb|CBA21709.1| Inner membrane protein yfcA [Erwinia amylovora CFBP1430]
 gi|312173059|emb|CBX81314.1| Inner membrane protein yfcA [Erwinia amylovora ATCC BAA-2158]
          Length = 265

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 79/187 (42%), Gaps = 13/187 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++ + + L+G +  + G GGGL+ VP L  A         +    A+ T+       
Sbjct: 10  LLGVLFLVALLAGFIDSIAG-GGGLLTVPALLAA--------GLSPAQALATNKLQSVGG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + +   R   +N++  +  I +  + ++  +L++ HV    L +   +  + +G+  
Sbjct: 61  SFSASLYFIRRKAVNLREQRLNIALTFVGSLAGALLVQHVRGDILRQLLPLLVIAIGLYF 120

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   R+  E   R+        + G   GF  G  G G G F  L  +   G ++ K+TA
Sbjct: 121 LLMPRIGEEDRQRRLHGLPFALVAGGCVGFYDGFFGPGAGSFYALAFVTLCGYNLAKSTA 180

Query: 198 TSAGVSA 204
            +  ++ 
Sbjct: 181 HAKVLNF 187


>gi|223043544|ref|ZP_03613589.1| transporter [Staphylococcus capitis SK14]
 gi|222443032|gb|EEE49132.1| transporter [Staphylococcus capitis SK14]
          Length = 257

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 97/256 (37%), Gaps = 26/256 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I  I+   F++  +  + G GGGL+  P L            +   +A+GT+    +
Sbjct: 5   LSVIVTIMFFGFIASFIDSVVG-GGGLISTPALLAV--------GLPPSMALGTNKFASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +++ S  +  R G +++K++      + I +   +++ +++  + L     +   ++ +
Sbjct: 56  FSTLTSAFKFIRSGKVDLKVVGKLFPFVFIASGAGAILATYLPANILKPLIIVVLTIVIV 115

Query: 140 LMLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             + +      R F         +  I  ++ GF  G LG G G F    +L +G     
Sbjct: 116 YTIVKKDWGSVRSFTSFTFIKAIIFSIMFIILGFYDGFLGGGTGSFMLFTLLMFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A   +  ++       LL+ I             LG VN     I+    I+ +      
Sbjct: 176 AAGNAKVLNFASNIGGLLLFIM------------LGQVNFTYGFIMALSMIVGSYFGAHF 223

Query: 255 SYMIGKKYLTIGFSMI 270
           +   G  Y+   F ++
Sbjct: 224 ALKKGVGYVKNLFILV 239


>gi|228990991|ref|ZP_04150954.1| integral membrane protein [Bacillus pseudomycoides DSM 12442]
 gi|228768771|gb|EEM17371.1| integral membrane protein [Bacillus pseudomycoides DSM 12442]
          Length = 262

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 76/197 (38%), Gaps = 14/197 (7%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +I + FL+  +  + G GGGL+ +P L       G+  S     A+ T+    +  S+M
Sbjct: 16  FLIASGFLAAFIDSVVG-GGGLISIPALLF----TGLPPST----AIATNKLASSMGSLM 66

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S +   R G +N K++     +  I  ++ + ++ H+    L     +  + + I  + +
Sbjct: 67  STISFIRSGNVNFKLVSKLFSLTFIGAILGAFVVKHISSEILKPLVLVLLIAVAIYTIMK 126

Query: 145 DRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
                +            +      + GF  G  G G G F     L  G    ++   +
Sbjct: 127 KEWGKDASYNGMSVKKRVIFSSVIFIIGFYDGFFGAGTGSFLLFTFLIIGFDFVQSAGNA 186

Query: 200 AGVSALIAFPALLVRIY 216
             ++      AL++ +Y
Sbjct: 187 KVLNFGSNIAALIIFLY 203


>gi|89257191|ref|YP_514553.1| hypothetical protein FTL_1954 [Francisella tularensis subsp.
           holarctica LVS]
 gi|89145022|emb|CAJ80393.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. holarctica LVS]
          Length = 108

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/103 (28%), Positives = 51/103 (49%)

Query: 176 GGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           G  +F   L+   G  I KA  TS  ++  I+    +  I  GW  + LPP+S+G++N+ 
Sbjct: 4   GISVFFVPLLTKCGLDIRKAIVTSTIITFFISLVMSIFFISFGWHASNLPPYSIGYLNLI 63

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             L+ L  S++   +  K +    +KYL I + ++MF  +   
Sbjct: 64  IFLVGLIPSLIGVNIGVKATASFPQKYLQIIYILMMFIIAITM 106


>gi|330503139|ref|YP_004380008.1| hypothetical protein MDS_2225 [Pseudomonas mendocina NK-01]
 gi|328917425|gb|AEB58256.1| hypothetical protein MDS_2225 [Pseudomonas mendocina NK-01]
          Length = 259

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 98/261 (37%), Gaps = 25/261 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ + +F++G +  + G GGGL+ +P L  A         +  H+ +GT+      
Sbjct: 12  STLAILAMVAFIAGFIDAIAG-GGGLLTIPALLTA--------GLPPHLVLGTNKLCATF 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R         ++ +    I  ++ +++   +  ++LN+   +     GI 
Sbjct: 63  GSGTAALTFYRRKLFKPAQWRNALLATLIGALLGAVIAHWMPAAWLNQMLPVIVFACGIY 122

Query: 141 MLKRDRL--YCERKFPDNYVK-YIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
           +L         E   P    + +  G+  G   G  G G G F T   +L Y   + +A+
Sbjct: 123 LLFGRMPEAPAEHDLPIARGRQWPQGLGLGLYDGVAGPGTGAFWTVSSLLMYPLDLVRAS 182

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++ +    AL+V I  G             V     L +    ++   L  + + 
Sbjct: 183 GVARTMNFVSNAAALVVFIAFGQ------------VAWVLGLSMGAALMVGAFLGARTAI 230

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G K++   F  ++   +  
Sbjct: 231 KGGSKFIRPVFITVVLALTAR 251


>gi|316932351|ref|YP_004107333.1| hypothetical protein Rpdx1_0972 [Rhodopseudomonas palustris DX-1]
 gi|315600065|gb|ADU42600.1| protein of unknown function DUF81 [Rhodopseudomonas palustris DX-1]
          Length = 320

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 93/294 (31%), Gaps = 56/294 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L++      G +SG+FGVGGG +M P+L            I   VA+ +    +A +S
Sbjct: 27  VLLVLAMGAAVGFVSGMFGVGGGFLMTPLLIFI--------GISPAVAVASVTSHMAASS 78

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL------------MISHVDKSFLNKAF 130
               + + R   I+  +    +      T +               ++  +    L  A 
Sbjct: 79  FSGALSYWRRRAIDPLLAFILLCGGIAGTGLGVWFFVLMRSVGQLDLVIALSYVVLLTAV 138

Query: 131 AIFCLLMGILML------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
               +  GI  +                         + R    + +         G++ 
Sbjct: 139 GGLMVSEGIRAIRRTSRGEVALPGRSGNRNWLYALPFKVRFKRSKIYLSVLPVIAIGVMI 198

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           GF+   +GVGGG     ++++           TS  ++      A ++   +   ++ + 
Sbjct: 199 GFIGAVMGVGGGFLLVPMLIYLLRVPTSTVVGTSMVLTLATMLIATVLHAATSHLVDAVL 258

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                       LI++   +       +    I  + L +   +++      FA
Sbjct: 259 A-----------LILMIGGVAGAQFGARAGQRIRGEQLRLLLGLLVLAVGIRFA 301



 Score = 42.0 bits (98), Expect = 0.087,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 50/148 (33%), Gaps = 8/148 (5%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           LY     V   +  +   +  +I    + G +  + GVGGG ++VP+L    +       
Sbjct: 170 LYALPFKVRFKRSKIYLSVLPVIAIGVMIGFIGAVMGVGGGFLLVPMLIYLLR------- 222

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDK 123
           +     +GTS+ +   T +++ + H      ++  +    +          +     +  
Sbjct: 223 VPTSTVVGTSMVLTLATMLIATVLHAATSHLVDAVLALILMIGGVAGAQFGARAGQRIRG 282

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCER 151
             L     +  L +GI       +    
Sbjct: 283 EQLRLLLGLLVLAVGIRFAIELGIRPAE 310


>gi|284799570|ref|ZP_05984306.2| putative integral membrane protein [Neisseria subflava NJ9703]
 gi|284797408|gb|EFC52755.1| putative integral membrane protein [Neisseria subflava NJ9703]
          Length = 259

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 91/265 (34%), Gaps = 24/265 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +   +++  F +G +    G GGGL+ +P L           S+       +  G +  
Sbjct: 8   SFFYYLVLVGFAAGLMDAAVG-GGGLLQIPGLFNLLPNATPVASVMGVNKFASCCGTLTA 66

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T      ++ R   +  K+L     +  + + + +  + +    ++     +  + M + 
Sbjct: 67  TG-----QYLRRIPVPWKMLLPAAVLAFVASYLGAKTVVYFPVQYMKPTMLVIMIAMCLY 121

Query: 141 MLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYK 194
              +  L    +              +G + GF  G  G G G     + + FYG     
Sbjct: 122 TFLKKDLGQTVRTEKLTRRETLWGLFFGALIGFYDGVFGPGTGSLLAFVFVRFYGYDFLA 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A A++  +++     AL   I              G V     + +   ++    +  +L
Sbjct: 182 ANASAKVINSTTNLAALTFFIPQ------------GHVVWAWAIPLAVANLCGGVVGARL 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVFA 279
           +   G + L  GF +++  T   FA
Sbjct: 230 AMRGGTRLLRYGFMLLLCLTIGKFA 254


>gi|261346198|ref|ZP_05973842.1| inner membrane protein YfcA [Providencia rustigianii DSM 4541]
 gi|282565854|gb|EFB71389.1| inner membrane protein YfcA [Providencia rustigianii DSM 4541]
          Length = 267

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 93/238 (39%), Gaps = 25/238 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +   L+   + L+G +  + G GGGL+ +P L            I     + T+      
Sbjct: 10  EVYALLFFVALLAGFIDSIAG-GGGLLTIPALLSV--------GITPVETLATNKLQAVG 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R   IN++       +  I  ++ +++I  +D +FL +   +  + +G+ 
Sbjct: 61  GSFSASLYFIRRKAINLREQIFPFVMTMIGAMLGAILIQSIDTAFLKQLLPVMVICVGVY 120

Query: 141 MLKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            L    +  + +             GM  GF  GA G G G       +L  G ++ KAT
Sbjct: 121 FLLTPSIGVKDRPQRVSMPIFGVAAGMTMGFYDGAFGPGTGSFLALAYVLLLGYNLAKAT 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A +  ++    F +L+  I  G        WSLGFV       +L   +L   L  +L
Sbjct: 181 AHAKLLNFASNFGSLIFFIIGG-----HVLWSLGFV-------MLAGQMLGARLGARL 226


>gi|195952382|ref|YP_002120672.1| protein of unknown function DUF81 [Hydrogenobaculum sp. Y04AAS1]
 gi|195931994|gb|ACG56694.1| protein of unknown function DUF81 [Hydrogenobaculum sp. Y04AAS1]
          Length = 267

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 97/263 (36%), Gaps = 21/263 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGID-----DSICMHVAMGTSLGVI 78
            L  V+    G +  L G GG ++ VP+L     L   +     D+I  H+A+G++   +
Sbjct: 10  LLSAVSGVFVGLILSLIGGGGSILAVPLLLYFVGLDNGNLSKEQDNIVKHLAIGSTALAV 69

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              + ++ M H +HG +++K    +     I + + +   + +  + L  AF    + + 
Sbjct: 70  GINAFINSMFHFKHGNVSIKEGFIFAIPGIIGSFLGAKAGASLRGADLLVAFGFMMIAIA 129

Query: 139 ILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYK 194
             ++         K     + ++  + G   G LSG  G+GGG      +LF    S  K
Sbjct: 130 FYVMSTKEKKEFHKEGIAGNPFLIALSGFFVGILSGFFGIGGGFLIVPALLFSTNLSTIK 189

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A  TS     +      +V                  V+    +  L    L   L  KL
Sbjct: 190 AIGTSLISVGMFGITTAIVYATKHE------------VDFLIAICYLIGGFLGGFLGVKL 237

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
           +  +  K L   +++ +      
Sbjct: 238 ATRLNAKKLKTFYAIAVILVGLY 260



 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 7/121 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI ++ F  G LSG FG+GGG ++VP L           ++    A+GTSL  +    + 
Sbjct: 152 LIALSGFFVGILSGFFGIGGGFLIVPALLF-------STNLSTIKAIGTSLISVGMFGIT 204

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + + +     ++  I   ++    +   +   + + ++   L   +AI  +L+G+ ++ R
Sbjct: 205 TAIVYATKHEVDFLIAICYLIGGFLGGFLGVKLATRLNAKKLKTFYAIAVILVGLYIIYR 264

Query: 145 D 145
           +
Sbjct: 265 N 265


>gi|229176886|ref|ZP_04304282.1| integral membrane protein [Bacillus cereus 172560W]
 gi|228606559|gb|EEK63984.1| integral membrane protein [Bacillus cereus 172560W]
          Length = 256

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 79/206 (38%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           ++     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   EELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLSPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S M   R G ++ KI++  I +  +  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAMYFIRSGKVDFKIVEKLIPLTIVGAVAGALVVKFIPSDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKNWGSVSTYKKMTQRKTLIFFFAILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|284005856|ref|YP_003391675.1| protein of unknown function DUF81 [Spirosoma linguale DSM 74]
 gi|283821040|gb|ADB42876.1| protein of unknown function DUF81 [Spirosoma linguale DSM 74]
          Length = 268

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 7/123 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             +I +   L G ++G+ G GGG +++P L    +L        M  A+G+SL +IA  S
Sbjct: 149 FPVIALEGGLVGLVTGIVGAGGGFLIIPTLVLFARL-------PMKTAIGSSLLIIAFNS 201

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++ F        I+   L  +  +      + S +  ++    L KAF  F L MG+ +L
Sbjct: 202 LVGFTSSPADQVIDWGFLSVFTALSVGGIFLGSQLARYIAGQHLRKAFGWFVLGMGVFIL 261

Query: 143 KRD 145
            ++
Sbjct: 262 AKE 264



 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 90/245 (36%), Gaps = 38/245 (15%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL     +  I       ++   SL ++  TS++  + + + G IN      +     +
Sbjct: 32  PVLVYLLHINPI-------LSTAYSLFIVGTTSLVGSINYMKQGLINYSAAVAFALPSLV 84

Query: 110 TTVVT-SLMISHVDKSF-------------LNKAFAIFCLLMGILMLKRDRLYC----ER 151
           T ++    M+ H+                 L   FA+  L     M++ ++       E 
Sbjct: 85  TVILARQFMLPHIPARLPLWAGFELTKPVALMVLFALIMLAAAYSMIRENKAVSVTERED 144

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPA 210
           K  +  V  + G + G ++G +G GGG      ++ +    +  A  +S     +IAF +
Sbjct: 145 KGTNFPVIALEGGLVGLVTGIVGAGGGFLIIPTLVLFARLPMKTAIGSSL---LIIAFNS 201

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           L+    S              ++ G + +   +S+    L ++L+  I  ++L   F   
Sbjct: 202 LVGFTSSPADQV---------IDWGFLSVFTALSVGGIFLGSQLARYIAGQHLRKAFGWF 252

Query: 271 MFTTS 275
           +    
Sbjct: 253 VLGMG 257


>gi|188587473|ref|YP_001919018.1| permease [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179352160|gb|ACB86430.1| permease [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 117

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 63/119 (52%), Gaps = 7/119 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++V   ++G+++GL GVGGG  ++P L+           +  H+A GT++ VI PT++ S
Sbjct: 6   LVVIGLITGSINGLLGVGGGTFLIPALTHV-------KKLKQHIAHGTTISVILPTALAS 58

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              +  H  ++  +    I    + + + + +++ ++  FL + FA F ++ GI ++  
Sbjct: 59  AAIYGFHDRVDYLLALKVIASGALGSFLGAKLMNFLNPDFLKRIFATFIIITGIWLIMS 117



 Score = 43.9 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 13/123 (10%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
            +    + G++TG ++G LGVGGG F    +        + A  T+  V    A  +  +
Sbjct: 2   SHIKLVVIGLITGSINGLLGVGGGTFLIPALTHVKKLKQHIAHGTTISVILPTALASAAI 61

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
             +                 + A+ +I   + L + L  KL   +   +L   F+  +  
Sbjct: 62  YGFHDRVD-----------YLLALKVIASGA-LGSFLGAKLMNFLNPDFLKRIFATFIII 109

Query: 274 TSF 276
           T  
Sbjct: 110 TGI 112


>gi|108804662|ref|YP_644599.1| hypothetical protein Rxyl_1829 [Rubrobacter xylanophilus DSM 9941]
 gi|108765905|gb|ABG04787.1| protein of unknown function DUF81 [Rubrobacter xylanophilus DSM
           9941]
          Length = 258

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 86/239 (35%), Gaps = 28/239 (11%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L  AF             A+  SL V+  TS+    EH R   + +++   +  +  
Sbjct: 28  VPILVYAFGF-------GAKEAVAASLAVVGLTSLFGAAEHWRRDRVRLRVALVFGTIAA 80

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK--------Y 160
               + + +   +  +     FA   L+  + ML+       R  P +            
Sbjct: 81  AGAYLGAHLAGFLSGAVQLSLFAAVMLIAALFMLRNGEPGEARGEPPSGGSAGRLLLRFA 140

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGW 219
             GM  G L+G +GVGGG      +    G  +  A  TS  + A+ +F      +    
Sbjct: 141 APGMGVGVLTGLVGVGGGFLIVPALALLGGVPMEAAVGTSLLIVAVNSFAGFAGYL---- 196

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G   +P        + ++ ++L ++         L   + +  L  GF++ +   + + 
Sbjct: 197 GEAEVPWG------LVSLFVVLAVTGSFA--GAYLVRFVPQHALKRGFAVFLVAMALLM 247



 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 46/101 (45%), Gaps = 7/101 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            ++VP L+           + M  A+GTSL ++A  S   F  +     +   ++  ++ 
Sbjct: 159 FLIVPALALL-------GGVPMEAAVGTSLLIVAVNSFAGFAGYLGEAEVPWGLVSLFVV 211

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           +    +   + ++  V +  L + FA+F + M +LML  +R
Sbjct: 212 LAVTGSFAGAYLVRFVPQHALKRGFAVFLVAMALLMLYENR 252


>gi|121603094|ref|YP_980423.1| hypothetical protein Pnap_0177 [Polaromonas naphthalenivorans CJ2]
 gi|120592063|gb|ABM35502.1| protein of unknown function DUF81 [Polaromonas naphthalenivorans
           CJ2]
          Length = 252

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 97/254 (38%), Gaps = 25/254 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+ +AS L+G +  + G GGGL++VP L   F       +       G + G     +
Sbjct: 3   LLLVSIASLLAGFVDSIVG-GGGLILVPALFAVF------PTTHPATLFGINKGASVWGT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++  ++ R   +    L          ++  + +++ +D  FL KA     + +    L
Sbjct: 56  AVATTQYARRVQLRWSALLPAAAAGFFGSLAGAWLVTVIDPGFLRKALPFVLVAVLAYTL 115

Query: 143 KRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKAT 196
            +  +            +  +    G+V GF  G  G G G F   L + + G     A+
Sbjct: 116 VKKDMGRHHTPRFTGRTETGIACCIGLVIGFYDGFFGPGTGSFLVFLFVRWLGYDFLNAS 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A++  ++      AL +  Y             G V     L +   ++  + L T+L+ 
Sbjct: 176 ASAKLLNTATNVAALGLFAYK------------GHVWWHFALTMAVANVAGSLLGTRLAL 223

Query: 257 MIGKKYLTIGFSMI 270
             G  ++ + F ++
Sbjct: 224 KHGAGFVRLVFIVV 237


>gi|224368324|ref|YP_002602487.1| hypothetical protein HRM2_12110 [Desulfobacterium autotrophicum
           HRM2]
 gi|223691040|gb|ACN14323.1| conserved hypothetical membrane protein [Desulfobacterium
           autotrophicum HRM2]
          Length = 567

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 93/298 (31%), Gaps = 63/298 (21%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             II+ + L G    + G  GGL+M    +   Q  G       +V   +++ +   + +
Sbjct: 265 LWIIIGAILVGAYFSMIGAAGGLLMAAFQAMVVQTAGPIGINAANVLRPSNIALTLFSPL 324

Query: 84  MSFMEHR-RHGTINMKILKDWIFVLPITTV-VTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            SF     +   +   +   +   + I +V +    I ++  S   +  A+  +LMGI  
Sbjct: 325 GSFYRFAVKEKRVAWPVGLSFGVGIFIGSVWLGKYAIEYLPMSSYKEWLAVLVVLMGIKT 384

Query: 142 LKRDRLYCERKFPD---------------------------------------------- 155
           L+        K  +                                              
Sbjct: 385 LQELTPKAMEKRKNIKAMVQKFNAAVAKAKKEGTAAEMGSIEPVKASLVDYRFKFWGEEF 444

Query: 156 ---NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPAL 211
                +  I G+  G +S + G+GGG      M   G   +Y A   +   +   +  + 
Sbjct: 445 RINPLLFGILGLGIGIVSRSFGIGGGFLLVPAMTSLGALPMYVAVPIALVGTCFSSIGSF 504

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           +  I +G+    LP        +   + I+        L ++L  +  +  L    ++
Sbjct: 505 IGYILNGY----LPD-------LWLAISIIIGGFAGGMLGSRLQTLFSEIQLKWVLAI 551


>gi|196045209|ref|ZP_03112441.1| putative membrane protein [Bacillus cereus 03BB108]
 gi|196023793|gb|EDX62468.1| putative membrane protein [Bacillus cereus 03BB108]
          Length = 256

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 77/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLPPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G ++ KI+   I +  I  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAIYFIRSGKVDFKIVGKLIPLTVIGAVTGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|119873393|ref|YP_931400.1| hypothetical protein Pisl_1910 [Pyrobaculum islandicum DSM 4184]
 gi|119674801|gb|ABL89057.1| protein of unknown function DUF81 [Pyrobaculum islandicum DSM 4184]
          Length = 283

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 91/290 (31%), Gaps = 52/290 (17%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
               +   S  +G +  L G+GGG+V+VP+   A         + +  A G SL     T
Sbjct: 6   LFAALFTISVFAGFVGSLTGLGGGVVLVPIYVLAL-------GVPVEYAAGASLVSTIAT 58

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN----KAFAIFCLLM 137
           S+ +   + R    N++I         +  +  SL  + +  S L       F    +  
Sbjct: 59  SLATSATYVRDRLTNVRIGMSLEISTTLGALAGSLTAAWIYASGLQRVVYLVFGAVLIFS 118

Query: 138 GILMLKRDRLYCERKFP----------------------------DNYVKYIWGMVTGFL 169
             +     +L    + P                              ++  +     G +
Sbjct: 119 SYMQWAVAKLGERPRPPPDRWTSFLKLRGRYYDAARGETVEYYGVRWWLGALIMFAAGLV 178

Query: 170 SGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG LG+GGG    L M +     I  +TATS  +  + A     V    G+    L   +
Sbjct: 179 SGFLGIGGGALKVLAMDWAMALPIKVSTATSNFMIGVTAATGTAVYWVHGYIQPFLAAAT 238

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                           +    + ++L   +  + +   F+ ++       
Sbjct: 239 ------------ALGVLAGAYVGSRLLPHLRSRSVRFFFATVVLLLGVQM 276



 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 7/125 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +  F +G +SG  G+GGG + V  +  A        ++ + V+  TS  +I  T+ 
Sbjct: 166 WLGALIMFAAGLVSGFLGIGGGALKVLAMDWAM-------ALPIKVSTATSNFMIGVTAA 218

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +  HG I   +       +     V S ++ H+    +   FA   LL+G+ ML 
Sbjct: 219 TGTAVYWVHGYIQPFLAAATALGVLAGAYVGSRLLPHLRSRSVRFFFATVVLLLGVQMLL 278

Query: 144 RDRLY 148
           +    
Sbjct: 279 KGVWS 283


>gi|206974274|ref|ZP_03235191.1| putative membrane protein [Bacillus cereus H3081.97]
 gi|217957866|ref|YP_002336410.1| hypothetical protein BCAH187_A0380 [Bacillus cereus AH187]
 gi|222094066|ref|YP_002528123.1| hypothetical protein BCQ_0359 [Bacillus cereus Q1]
 gi|229137133|ref|ZP_04265752.1| integral membrane protein [Bacillus cereus BDRD-ST26]
 gi|229182690|ref|ZP_04309931.1| integral membrane protein [Bacillus cereus BGSC 6E1]
 gi|206747514|gb|EDZ58904.1| putative membrane protein [Bacillus cereus H3081.97]
 gi|217065368|gb|ACJ79618.1| putative membrane protein [Bacillus cereus AH187]
 gi|221238121|gb|ACM10831.1| conserved hypothetical protein [Bacillus cereus Q1]
 gi|228600775|gb|EEK58354.1| integral membrane protein [Bacillus cereus BGSC 6E1]
 gi|228646305|gb|EEL02520.1| integral membrane protein [Bacillus cereus BDRD-ST26]
          Length = 256

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 77/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLPPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G ++ KI+   I +  I  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAIYFIRSGKVDFKIVGKLIPLTVIGAVAGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|317062510|ref|ZP_07926995.1| membrane protein [Fusobacterium ulcerans ATCC 49185]
 gi|313688186|gb|EFS25021.1| membrane protein [Fusobacterium ulcerans ATCC 49185]
          Length = 269

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 99/261 (37%), Gaps = 27/261 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +     + +A F +  +  + G GGGL+ +P              +  HVA+GT+     
Sbjct: 3   LSGFIFLGIACFFAAFIDAIAG-GGGLISLPAFLA--------SGLPAHVALGTNKVAAC 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +++ S  +  + G IN +++K       I  V+    +  +D  +L     +  +++ I
Sbjct: 54  CSTIASSAKFAQSGKINWQLMKKLAAFSFIGAVLGVKTVVMIDSKYLYPIAIVLLVMVLI 113

Query: 140 LMLKRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIY 193
             L+   L  E +F     +      I     GF  G  G G G F    M+  +     
Sbjct: 114 YTLRNKNLGEENRFEGLTGQNVKWGIIMAFALGFYDGFFGPGTGSFLIFAMIRIFKIDFT 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+  +  ++      ++++ +  G          + +V   ++  I+   ++   +  K
Sbjct: 174 NASGNAKILNLSSNVASVIMFVSMG---------KVAYVYSFSMAAIM---VVGAIIGAK 221

Query: 254 LSYMIGKKYLTIGFSMIMFTT 274
           ++   G K++   F ++    
Sbjct: 222 MAVTRGTKFIKPMFLIVTTVV 242


>gi|219870905|ref|YP_002475280.1| putative permease [Haemophilus parasuis SH0165]
 gi|219691109|gb|ACL32332.1| putative permease [Haemophilus parasuis SH0165]
          Length = 257

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 97/239 (40%), Gaps = 25/239 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   ++ VA+F++G +  + G GGGL+ +P L       GI  +    VA+GT+     
Sbjct: 5   LDVAIILFVAAFVAGFIDAIAG-GGGLITIPALLAV----GIPPT----VALGTNKLQAC 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  + +   R   +++K +   I +  I   + ++++  +D + L  A     L++G 
Sbjct: 56  GGSFSASLYFVRKKAVDLKQIWLLILLTFIGGSIGTILVQIIDVNALKVALPFLILIIGC 115

Query: 140 LMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
             L    L  E   ++           M  GF  G  G   G F  L  +L  G ++ ++
Sbjct: 116 YFLFSPSLGDEQRRQRMSFPMFACTAAMGIGFYDGLFGPATGSFFTLAFVLLLGFNLTQS 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            A S  ++      +L+  I  G        W +GF       +++    +   L  ++
Sbjct: 176 VAHSKVLNFTSNLASLIFFIIGG-----AILWKIGF-------LMMIGQFIGASLGARM 222


>gi|183599679|ref|ZP_02961172.1| hypothetical protein PROSTU_03168 [Providencia stuartii ATCC 25827]
 gi|188021933|gb|EDU59973.1| hypothetical protein PROSTU_03168 [Providencia stuartii ATCC 25827]
          Length = 276

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 25/238 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +   L+   +  +G +  + G GGGL+ +P L            I    A+ T+      
Sbjct: 19  EIYLLLFCVALFAGFIDSIAG-GGGLLTIPALLSV--------GITPVEALATNKLQAVG 69

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R   IN++       +  I  ++ +++I  ++  FL +   I  + +G+ 
Sbjct: 70  GSFSSSLYFVRRKAINLREQMFPFIMTIIGAMLGAILIQMINTDFLKQLLPIMVICVGLY 129

Query: 141 MLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L    +     +++          GM  GF  GA G G G F  L  +L  G ++ KAT
Sbjct: 130 FLLTPSIGAQDRKQRISMPVFGVAVGMTMGFYDGAFGPGTGSFLALGYVLLLGYNLAKAT 189

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A +  ++    F +L+  I  G        W LGFV       +L   ++   L  +L
Sbjct: 190 AHAKLLNFASNFGSLIFFIIGG-----HVLWVLGFV-------MLIGQMVGARLGARL 235


>gi|114332472|ref|YP_748694.1| hypothetical protein Neut_2525 [Nitrosomonas eutropha C91]
 gi|114309486|gb|ABI60729.1| protein of unknown function DUF81 [Nitrosomonas eutropha C91]
          Length = 277

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 99/279 (35%), Gaps = 39/279 (13%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++   L I+    +G + GL G GG ++ VP+L     +   + +    +++G S  V  
Sbjct: 1   MEVHWLGILPGIFTGFVLGLTGSGGTIIAVPLLIFGLNVTVAEAAPVALLSVGVSAAVAT 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S+       R   I  +          + T     +      + L   F+       +
Sbjct: 61  YSSL-------RQRIIRYRAAGLIAGTGMLITPAGVWVAQQFSDALLTVLFSAVLAYAAL 113

Query: 140 LMLKRDRLYCERK-------------------FPDNYVKYIWGMVTGFLSGALGVGGGIF 180
            M ++  L  + +                    P      + G  TGFLSG LGVGGG  
Sbjct: 114 YMYRKSNLAAQPEEAVFPPCQLNLESGRLIWTIPCAKGLLVSGAATGFLSGLLGVGGGFI 173

Query: 181 TNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
               +      S+    AT+  ++ALI+   ++               S+GF+N    L 
Sbjct: 174 IIPALRKVSDLSMKTLIATALSITALISLTGVISAT------------SMGFMNWPLALP 221

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               ++  T +    ++   +  L  GF+++ +  +   
Sbjct: 222 FTAGTVAGTLIGKHYAHSFDEAKLERGFAILTWCIALSM 260



 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 7/98 (7%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +++P L K          + M   + T+L + A  S+   +     G +N  +   +   
Sbjct: 173 IIIPALRKV-------SDLSMKTLIATALSITALISLTGVISATSMGFMNWPLALPFTAG 225

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
               T++        D++ L + FAI    + + ML +
Sbjct: 226 TVAGTLIGKHYAHSFDEAKLERGFAILTWCIALSMLIK 263


>gi|317484490|ref|ZP_07943400.1| hypothetical protein HMPREF0179_00751 [Bilophila wadsworthia 3_1_6]
 gi|316924266|gb|EFV45442.1| hypothetical protein HMPREF0179_00751 [Bilophila wadsworthia 3_1_6]
          Length = 254

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 95/249 (38%), Gaps = 25/249 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++I+  F+ G L G  G+G G++++P L            +  HVAMGT+L     T+ +
Sbjct: 5   MMIIVGFIVGFLVGCTGMG-GIILIPALVYL-------SGLSSHVAMGTTLFTFIFTTSL 56

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-- 142
               + R G ++ K          + T V + + +     +LN   A+  L+ G L+   
Sbjct: 57  CSWLYIRLGHVDWKATIPICIGGFLFTYVGADVKAFTAAPYLNLILALLILMAGALVFCP 116

Query: 143 ---KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
              +R     E +    +V +  G   GF++G  G GG + +  +M+  G     A    
Sbjct: 117 VRGRRFSFMEEGRRSRFWVLFAVGSGVGFVAGLTGAGGPVLSVPIMIALGFPPLIAIGAG 176

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
              S  +A          G        + +G        +++ I IL   L   ++  + 
Sbjct: 177 QVYSVPVALSGSAANFLHG-----AIDYKVG-------ALMIVIQILGILLGVYMANRMD 224

Query: 260 KKYLTIGFS 268
              L    +
Sbjct: 225 TTKLRKMVA 233



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 8/122 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++       G ++GL G GG ++ VP++       G        +A+G       P +
Sbjct: 133 FWVLFAVGSGVGFVAGLTGAGGPVLSVPIMIAL----GFPPL----IAIGAGQVYSVPVA 184

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +     +  HG I+ K+    I +  +  ++   M + +D + L K  A  CL  G  +L
Sbjct: 185 LSGSAANFLHGAIDYKVGALMIVIQILGILLGVYMANRMDTTKLRKMVAWVCLFCGGFIL 244

Query: 143 KR 144
             
Sbjct: 245 VN 246


>gi|16082023|ref|NP_394445.1| hypothetical protein Ta0985 [Thermoplasma acidophilum DSM 1728]
 gi|10640300|emb|CAC12114.1| conserved hypothetical membrane protein [Thermoplasma acidophilum]
          Length = 255

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 16/197 (8%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G L+G+ G  G L++VP LS           +    ++GTSL V   T+      +
Sbjct: 11  GIAVGALTGITGSSGVLIVVPALSIM--------GLSFQDSVGTSLLVDVITTSTVIYVY 62

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR--- 146
            ++  I++           + T +   +   V +  L  AFAI  +++ I M +R R   
Sbjct: 63  LKNKNIDIIPAVIMGIGALVGTQIGIRIAISVSERPLEIAFAILTIILAIQMFRRSRGHK 122

Query: 147 ----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATATSAG 201
                  E +       ++  +  G L+G LG  GGI    +LMLF+  S  K   T+  
Sbjct: 123 TSINGKKEYRRAAWVFAFLLSIPVGILTGTLGTSGGIMFIGILMLFFSLSAQKMVGTATF 182

Query: 202 VSALIAFPALLVRIYSG 218
                A       +  G
Sbjct: 183 AMLFSALSGSAGYLIVG 199


>gi|225022462|ref|ZP_03711654.1| hypothetical protein CORMATOL_02502 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944701|gb|EEG25910.1| hypothetical protein CORMATOL_02502 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 309

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 86/247 (34%), Gaps = 25/247 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA-MGTSLGVIAPTS 82
            LII A   +  + G  G+G G  +         +     S  +H A +GT+L       
Sbjct: 1   MLIIFAGAFAQLVDG--GIGMGFGVTSTTILLLSMGPAQASAVVHAAEVGTTLA------ 52

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H R G +N +++        I     + ++SH+         AI   L+G+ +L
Sbjct: 53  --SGLSHWRFGNVNWRVVLTLGVPGAIGAATGATLLSHIATDSAKPITAIILALVGVNLL 110

Query: 143 KR-DRLYCERKFPDNYVKYIWGMVTGFLSGAL-GVGGGIFTNL----LMLFYGASIYKAT 196
            R  R    R       +  + +  G   G +   GGG +  +    LM        +  
Sbjct: 111 WRFSRGVIARHNTPKPYRTPFLIFLGIFGGLIDATGGGGWGPITTSTLMSLGKEEPRRVV 170

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T      L+A  A +      W             N  AVL +L   +L  PL+  L +
Sbjct: 171 GTVNTAEFLVASAATMGFTLGLWQELQT--------NAVAVLCLLLGGVLTAPLSAWLIH 222

Query: 257 MIGKKYL 263
            +    L
Sbjct: 223 HMNPIIL 229


>gi|332185052|ref|ZP_08386801.1| hypothetical protein SUS17_418 [Sphingomonas sp. S17]
 gi|332014776|gb|EGI56832.1| hypothetical protein SUS17_418 [Sphingomonas sp. S17]
          Length = 253

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 92/258 (35%), Gaps = 21/258 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +I   +   F +  + G  G+  G++     +     +G+  +     A      V  
Sbjct: 8   LIHILPFVAVGFAAQVVDGALGMAFGVIS----NTLLMSLGVPPAA----ASAGVHSVET 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+ +S + H  H  ++ K+    +    I   + + ++S++D + +     ++   +G+
Sbjct: 60  FTTAVSGISHAVHRNVDWKLFLRLMIPGVIGGALGAYVLSNIDAAVVKPFILMYLAGIGV 119

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            +L R  L       +  +    G++ GFL  A G G G      +L  GA+      T 
Sbjct: 120 YLLIRA-LRHRPNVREPKIVEPLGLIGGFLDAAGGGGWGPVVTSNLLAQGAAPRLTIGTV 178

Query: 200 AGVSALIAFPALLVRIY-SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 +        I   GW    +           A + +L   I   P    L+  +
Sbjct: 179 NTAEFFLTATISATFITQMGWAAFTM-----------ATVGLLIGGIFAAPFGAMLAKRV 227

Query: 259 GKKYLTIGFSMIMFTTSF 276
             + L +   +I+  TS 
Sbjct: 228 PPQKLLLMVGIIVTLTSL 245


>gi|291533753|emb|CBL06866.1| Predicted permeases [Megamonas hypermegale ART12/1]
          Length = 254

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 89/252 (35%), Gaps = 26/252 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +IV  F++  +  + G GGGL+ +P L       G+        A+ T+    +  + 
Sbjct: 10  LFLIVTGFIAAFIDTVVG-GGGLISLPALLF----TGMPPV----TAIATNKVSASMGAT 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + F    R G ++   +K  + +  I ++  + ++  +   FL     I  + + I  L 
Sbjct: 61  IGFASFVRSGRVDFSTIKYLLPLSFIGSICGASILKLIPSDFLRPLIIILLVAVTIYTLT 120

Query: 144 RDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           +        F         +  I   + GF  G  G G G F     L+ G     A A 
Sbjct: 121 KKEFGQVATFNGMSQKMWILSAIAAFIFGFYDGFFGPGTGTFLLFAFLWIGFDFIGAAAN 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           + G++        L  I SG             V+    + +    ++      +++   
Sbjct: 181 ARGLNFASNIAGALFFISSGI------------VDFAYAIPMGLAMMVGAFCGARMAIAK 228

Query: 259 GKKYLTIGFSMI 270
           G  Y+   F ++
Sbjct: 229 GATYVKTLFIIM 240


>gi|229095011|ref|ZP_04226007.1| integral membrane protein [Bacillus cereus Rock3-29]
 gi|229101112|ref|ZP_04231878.1| integral membrane protein [Bacillus cereus Rock3-28]
 gi|229113964|ref|ZP_04243390.1| integral membrane protein [Bacillus cereus Rock1-3]
 gi|228669423|gb|EEL24839.1| integral membrane protein [Bacillus cereus Rock1-3]
 gi|228682240|gb|EEL36351.1| integral membrane protein [Bacillus cereus Rock3-28]
 gi|228688341|gb|EEL42223.1| integral membrane protein [Bacillus cereus Rock3-29]
          Length = 256

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +  +  I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSLQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLSPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G ++ KI+   I +  I  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAIYFIRSGKVDFKIVGKLIPLTIIGAVAGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|229165274|ref|ZP_04293061.1| integral membrane protein [Bacillus cereus AH621]
 gi|228618099|gb|EEK75137.1| integral membrane protein [Bacillus cereus AH621]
          Length = 256

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 79/206 (38%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           ++     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   EELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLSPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 ++ S +   R G ++ +I+   I +  I  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTLTSTIYFIRSGKVDFRIVGKLIPLTIIGAVAGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKDWGSASTYKKMTKGKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|65318350|ref|ZP_00391309.1| COG0730: Predicted permeases [Bacillus anthracis str. A2012]
          Length = 263

 Score = 65.5 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 16  SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 66

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 67  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVIAIY 126

Query: 141 MLKRDRL---YCERKFPDNY--VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +  +   +  V GF  G LG G G F    +LF G    KA
Sbjct: 127 TIFKKDWGSISTHKKLSGRHVIIFAFFIFVIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 186

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 187 AGTAKFLNLGSNVGALLMFMYVG 209



 Score = 35.4 bits (81), Expect = 9.4,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 20  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 75

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 76  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVIAIY 126


>gi|314933866|ref|ZP_07841231.1| putative integral membrane protein [Staphylococcus caprae C87]
 gi|313654016|gb|EFS17773.1| putative integral membrane protein [Staphylococcus caprae C87]
          Length = 257

 Score = 65.5 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 96/256 (37%), Gaps = 26/256 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I  I+   F+S  +  + G GGGL+  P L            +   +A+GT+    +
Sbjct: 5   LSVIVTIMFFGFISSFIDSVVG-GGGLISTPALLAV--------GLPPSMALGTNKFASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +++ S  +  R G +++K++      + I +   +++ +++  + L     +   ++ +
Sbjct: 56  FSTLTSAFKFIRSGKVDLKVVGKLFPFVFIASGAGAILATYLPANILKPLIIVVLTIVIV 115

Query: 140 LMLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             + +      R F         +  I  ++ GF  G LG G G      +L +G     
Sbjct: 116 YTIVKKDWGSVRSFTSFTFIKAIIFSIMFIILGFYDGFLGGGTGSLMLFTLLMFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A   +  ++       LL+ I             LG VN     I+    I+ +      
Sbjct: 176 AAGNAKVLNFASNIGGLLLFIM------------LGQVNFTYGFIMALSMIVGSYFGAHF 223

Query: 255 SYMIGKKYLTIGFSMI 270
           +   G  Y+   F ++
Sbjct: 224 ALKKGVGYVKNLFILV 239


>gi|229159448|ref|ZP_04287466.1| integral membrane protein [Bacillus cereus R309803]
 gi|228624019|gb|EEK80827.1| integral membrane protein [Bacillus cereus R309803]
          Length = 256

 Score = 65.5 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 77/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSFQIIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLPPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G ++ KI+   I +  I  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSTIYFIRSGKVDFKIVGKLIPLTIIGAVAGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|294012260|ref|YP_003545720.1| putative permease [Sphingobium japonicum UT26S]
 gi|292675590|dbj|BAI97108.1| putative permease [Sphingobium japonicum UT26S]
          Length = 257

 Score = 65.5 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 92/254 (36%), Gaps = 19/254 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I+  F +  + G  G+  G++     S     +G+  S     A  +       T+
Sbjct: 12  ILPFILIGFGAQMIDGALGMAYGVIS----STLLLALGVPPSR----ASASVHAAETFTT 63

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +S + H  H  ++ ++    I    I  V  + ++S+VD + +      +   +G+ ++
Sbjct: 64  GVSAISHIIHRNVDWRLFARLIIPGVIGGVAGAYLLSNVDGAMIKPFVQFYLTAIGVYLV 123

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            R   Y   +  +       G+V GF+    G G G      +L  G+S      T   V
Sbjct: 124 WRGFHYP-PQARNPKWVGPLGLVGGFMDATGGGGWGPVVTSNLLIQGSSPRHTIGTVNSV 182

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
             ++     +  +    G      +++G         +L   ++  P    L+  +  + 
Sbjct: 183 EFILTTSISITFLLH-LGWETFTTYTVG---------LLIGGVIAAPFGAMLARHVSPRT 232

Query: 263 LTIGFSMIMFTTSF 276
           L I    I+  TS 
Sbjct: 233 LFIAVGSILTLTSL 246


>gi|30260480|ref|NP_842857.1| hypothetical protein BA_0308 [Bacillus anthracis str. Ames]
 gi|47525571|ref|YP_016920.1| hypothetical protein GBAA_0308 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49183322|ref|YP_026574.1| hypothetical protein BAS0294 [Bacillus anthracis str. Sterne]
 gi|65317732|ref|ZP_00390691.1| COG0730: Predicted permeases [Bacillus anthracis str. A2012]
 gi|165871380|ref|ZP_02216028.1| putative membrane protein [Bacillus anthracis str. A0488]
 gi|167634263|ref|ZP_02392585.1| putative membrane protein [Bacillus anthracis str. A0442]
 gi|167640129|ref|ZP_02398396.1| putative membrane protein [Bacillus anthracis str. A0193]
 gi|170688369|ref|ZP_02879578.1| putative membrane protein [Bacillus anthracis str. A0465]
 gi|170708767|ref|ZP_02899204.1| putative membrane protein [Bacillus anthracis str. A0389]
 gi|177653670|ref|ZP_02935809.1| putative membrane protein [Bacillus anthracis str. A0174]
 gi|190567387|ref|ZP_03020301.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I]
 gi|190567495|ref|ZP_03020408.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I]
 gi|196034601|ref|ZP_03102009.1| putative membrane protein [Bacillus cereus W]
 gi|196040173|ref|ZP_03107475.1| putative membrane protein [Bacillus cereus NVH0597-99]
 gi|218901497|ref|YP_002449331.1| hypothetical protein BCAH820_0339 [Bacillus cereus AH820]
 gi|227812972|ref|YP_002812981.1| hypothetical protein BAMEG_0365 [Bacillus anthracis str. CDC 684]
 gi|228925552|ref|ZP_04088641.1| integral membrane protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229119954|ref|ZP_04249209.1| integral membrane protein [Bacillus cereus 95/8201]
 gi|229603476|ref|YP_002864925.1| hypothetical protein BAA_0362 [Bacillus anthracis str. A0248]
 gi|254686691|ref|ZP_05150549.1| hypothetical protein BantC_23015 [Bacillus anthracis str.
           CNEVA-9066]
 gi|254739084|ref|ZP_05196786.1| hypothetical protein BantWNA_28340 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254742294|ref|ZP_05199980.1| hypothetical protein BantKB_14998 [Bacillus anthracis str. Kruger
           B]
 gi|254756070|ref|ZP_05208099.1| hypothetical protein BantV_26711 [Bacillus anthracis str. Vollum]
 gi|254761887|ref|ZP_05213736.1| hypothetical protein BantA9_25711 [Bacillus anthracis str.
           Australia 94]
 gi|301052020|ref|YP_003790231.1| putative integral membrane protein [Bacillus anthracis CI]
 gi|30253848|gb|AAP24343.1| putative membrane protein [Bacillus anthracis str. Ames]
 gi|47500719|gb|AAT29395.1| putative membrane protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177249|gb|AAT52625.1| membrane protein, putative [Bacillus anthracis str. Sterne]
 gi|164712864|gb|EDR18393.1| putative membrane protein [Bacillus anthracis str. A0488]
 gi|167511940|gb|EDR87319.1| putative membrane protein [Bacillus anthracis str. A0193]
 gi|167530577|gb|EDR93292.1| putative membrane protein [Bacillus anthracis str. A0442]
 gi|170126346|gb|EDS95236.1| putative membrane protein [Bacillus anthracis str. A0389]
 gi|170667701|gb|EDT18455.1| putative membrane protein [Bacillus anthracis str. A0465]
 gi|172081250|gb|EDT66325.1| putative membrane protein [Bacillus anthracis str. A0174]
 gi|190561282|gb|EDV15254.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I]
 gi|190561514|gb|EDV15485.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I]
 gi|195992644|gb|EDX56604.1| putative membrane protein [Bacillus cereus W]
 gi|196029028|gb|EDX67633.1| putative membrane protein [Bacillus cereus NVH0597-99]
 gi|218536522|gb|ACK88920.1| putative membrane protein [Bacillus cereus AH820]
 gi|227006933|gb|ACP16676.1| putative membrane protein [Bacillus anthracis str. CDC 684]
 gi|228663420|gb|EEL19005.1| integral membrane protein [Bacillus cereus 95/8201]
 gi|228834030|gb|EEM79578.1| integral membrane protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229267884|gb|ACQ49521.1| putative membrane protein [Bacillus anthracis str. A0248]
 gi|300374189|gb|ADK03093.1| possible integral membrane protein [Bacillus cereus biovar
           anthracis str. CI]
          Length = 256

 Score = 65.5 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 77/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLPPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G ++ KI+   I +  I  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAIYFIRSGKVDFKIVGKLIPLTVIGAVAGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|115380244|ref|ZP_01467264.1| permease [Stigmatella aurantiaca DW4/3-1]
 gi|310822959|ref|YP_003955317.1| hypothetical protein STAUR_5728 [Stigmatella aurantiaca DW4/3-1]
 gi|115362752|gb|EAU61967.1| permease [Stigmatella aurantiaca DW4/3-1]
 gi|309396031|gb|ADO73490.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 270

 Score = 65.5 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 66/189 (34%), Gaps = 18/189 (9%)

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK--- 152
           ++++         +  ++  L+  ++  + +   F +F L +G+ +L       E     
Sbjct: 80  DIRLGLTLELATVMGALIGGLVAVYIAPAMVAVVFGLFALYVGLQLLLVRSPQEEPVQGT 139

Query: 153 -FPDNYVKYIWGMVT-GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFP 209
             P NY   + G    G LS  LGVGGG     LM +        A+ATS+ +  +    
Sbjct: 140 YTPVNYPLGVSGSFVAGGLSALLGVGGGPLKVPLMSYGMRVPFKVASATSSLMIGVTGAA 199

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           ++    + G     L               ++   +      ++L   +    L   F+ 
Sbjct: 200 SVASYAWRGHLKLALVSP------------LIVGVLAGAHGGSRLMPYVSTSLLKKLFAG 247

Query: 270 IMFTTSFVF 278
           ++   +   
Sbjct: 248 LLLVVAVQM 256



 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L +  SF++G LS L GVGGG + VP++S   +       +   VA  TS  +I  T   
Sbjct: 147 LGVSGSFVAGGLSALLGVGGGPLKVPLMSYGMR-------VPFKVASATSSLMIGVTGAA 199

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S   +   G + + ++   I  +       S ++ +V  S L K FA   L++ + ML +
Sbjct: 200 SVASYAWRGHLKLALVSPLIVGVLAGAHGGSRLMPYVSTSLLKKLFAGLLLVVAVQMLWK 259


>gi|83943864|ref|ZP_00956321.1| membrane protein [Sulfitobacter sp. EE-36]
 gi|83953505|ref|ZP_00962227.1| membrane protein [Sulfitobacter sp. NAS-14.1]
 gi|83842473|gb|EAP81641.1| membrane protein [Sulfitobacter sp. NAS-14.1]
 gi|83845111|gb|EAP82991.1| membrane protein [Sulfitobacter sp. EE-36]
          Length = 302

 Score = 65.5 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 94/263 (35%), Gaps = 53/263 (20%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG ++ P+L       GI  +    VA+ T    I  +S  + + H +  T++
Sbjct: 28  SGMFGVGGGFLITPLLFFI----GIPPA----VAVATGANQIVASSFSALLVHLKRKTVD 79

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGILMLK-------- 143
           +++    +    +       + +++         +N  + +F  ++G LML         
Sbjct: 80  LRMGSVLLAGGLVGAAAGVTIFNYLKSLGQVDLLVNLCYVVFLGIIGGLMLIESLNAMYK 139

Query: 144 --------RDRLYCERKFP------------DNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
                   R +    +K P                  + G   G L+  +GVGGG     
Sbjct: 140 TRSGKRPPRKKHTWIQKLPFKMRFRVTGLYISVIPPLLVGAFVGLLAAIMGVGGGFIMVP 199

Query: 184 LMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            M++  G        TS      +A    ++   + +            V+I   +++L 
Sbjct: 200 AMIYLLGMPTKVVVGTSLFQIIFVAAFTTMLHATTNYT-----------VDIVLAVLLLI 248

Query: 243 ISILITPLATKLSYMIGKKYLTI 265
             ++     T L   +  + L I
Sbjct: 249 GGVIGAQFGTSLGTKLKAEQLRI 271


>gi|237732360|ref|ZP_04562841.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226907899|gb|EEH93817.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 269

 Score = 65.5 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 98/237 (41%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  L G GGGL+ +P L       G+  +     A+ T+       
Sbjct: 14  LLGVLFFVAMLAGFIDSLAG-GGGLLTIPALM----AAGMPPAQ----ALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S +   R G +N+   K  IF+  I ++  +L++ HV    L +   +  + +G+  
Sbjct: 65  SISSSLYFIRRGVVNLADQKLNIFMTFIGSMSGALLVQHVQSDVLRQILPVLVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   ++  E   R+        + G   GF  G  G   G F  L  ++  G ++ K+TA
Sbjct: 125 LLMPKIGEEDRQRRLHGLPFALVAGGCVGFYDGFFGPAAGSFYALAFVMLCGYNLAKSTA 184

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +  ++A      LL+         G   W+ GFV       +L    +   + ++L
Sbjct: 185 HAKVLNATSNIGGLLLFALG-----GKVIWATGFV-------MLIGQFIGARMGSRL 229


>gi|222086295|ref|YP_002544828.1| hypothetical protein Arad_2790 [Agrobacterium radiobacter K84]
 gi|221723743|gb|ACM26899.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 275

 Score = 65.5 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 83/241 (34%), Gaps = 28/241 (11%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGLV VP +     L GI         +GT+       +  + + + R G + ++    
Sbjct: 42  GGGLVTVPAML----LAGIPPLQT----LGTNKVQSICGAASATIAYARQGHVQLREQLP 93

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY---CERKFPDNYVK 159
              +  I  ++ + + + +    L        + + +    +  L      R+       
Sbjct: 94  MALMAVIGGMLGAALATIMPGDVLRIILPFLLIAIALYFAFKPNLNDVEKHRRMSAGLFG 153

Query: 160 YIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
                + GF  GA G G G       +   G  + KATA +  ++       L+V I+S 
Sbjct: 154 ITLVPLIGFYDGAFGPGTGSFLMLAFVALAGFGLLKATAHTKLLNFGSNLGGLIVFIFS- 212

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                      G +     L++     L   + ++L+  IG + +      ++      F
Sbjct: 213 -----------GAILWKVGLVMGLGQFLGAQVGSRLAMRIGARLIKP----LLVIVCIAF 257

Query: 279 A 279
           A
Sbjct: 258 A 258


>gi|42779418|ref|NP_976665.1| hypothetical protein BCE_0337 [Bacillus cereus ATCC 10987]
 gi|42735334|gb|AAS39273.1| membrane protein, putative [Bacillus cereus ATCC 10987]
          Length = 256

 Score = 65.5 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 77/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLPPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G ++ KI+   I +  I  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAIYFIRSGKVDFKIVGKLIPLTIIGAVAGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|56476908|ref|YP_158497.1| hypothetical protein ebA2617 [Aromatoleum aromaticum EbN1]
 gi|56312951|emb|CAI07596.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 259

 Score = 65.5 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 53/272 (19%), Positives = 92/272 (33%), Gaps = 37/272 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
               VA F  G + GL GVGGG +M P+L   F        I   VA+GT L   + T  
Sbjct: 3   LAYTVAGFAVGAIVGLTGVGGGSLMTPLLVLLF-------GIHPSVAVGTDLLYASITKT 55

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-------DKSFLNKAFAIFCLL 136
              + H   GT++ +I +          VVT L++              +  A  +  +L
Sbjct: 56  GGTLAHGLKGTVDWQITRRLATGSLPAAVVTLLLVGTFAPGGMEGATGLIKVALGVALVL 115

Query: 137 MGILMLKRDRLYC---------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN--LLM 185
             + ++ R ++                   +  + G V G L     VG G      L  
Sbjct: 116 TAVALIFRKQIQAYALARFGGTSNPVRTARLTVLVGAVLGVLVSISSVGAGALGVTALFF 175

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           L+ G    +   +    +  +   A +              W LG V+   +  ++  S+
Sbjct: 176 LYPGMPALRIVGSDIAHAVPLTLVAGIG------------HWMLGSVDWFLLGSLIVGSL 223

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               L T +S  +  + L    + ++      
Sbjct: 224 PGIWLGTHISTKVPDRVLRPILATMLVLVGAK 255



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 46/118 (38%), Gaps = 6/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L ++   + G L  +  VG G + V  L   +        +     +G+ +    P +++
Sbjct: 146 LTVLVGAVLGVLVSISSVGAGALGVTALFFLY------PGMPALRIVGSDIAHAVPLTLV 199

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + H   G+++  +L   I        + + + + V    L    A   +L+G  ++
Sbjct: 200 AGIGHWMLGSVDWFLLGSLIVGSLPGIWLGTHISTKVPDRVLRPILATMLVLVGAKLI 257


>gi|290891597|ref|ZP_06554652.1| hypothetical protein AWRIB429_2042 [Oenococcus oeni AWRIB429]
 gi|290478748|gb|EFD87417.1| hypothetical protein AWRIB429_2042 [Oenococcus oeni AWRIB429]
          Length = 248

 Score = 65.5 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 80/197 (40%), Gaps = 8/197 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  +++   + G +    G GG  + + VL+  F L           A  TSL    P+ 
Sbjct: 3   IVSLLLIGLIIGFVVISMGGGGAAIYLGVLTAVFHL-------APAAATATSLVTALPSL 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++  + + R   IN K+    +       VV SL+  ++ +S       I  +L+G+ ++
Sbjct: 56  ILGSLGYYRQRAINFKLGNQMLIAALPAVVVGSLLSPYIPESIYTWVVGIILVLLGLNIM 115

Query: 143 KRDRLYCER-KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +  +    + +         +G+++G + G  G+ GG      +L  G ++  A ATS+ 
Sbjct: 116 RNKQTGSTQLQAHGRLKASSFGILSGLMVGVAGISGGGPILAGLLILGLNMVNAVATSSY 175

Query: 202 VSALIAFPALLVRIYSG 218
           V   +     +     G
Sbjct: 176 VLVGMTIVGTIFHTAGG 192


>gi|39933890|ref|NP_946166.1| hypothetical protein RPA0813 [Rhodopseudomonas palustris CGA009]
 gi|192289309|ref|YP_001989914.1| hypothetical protein Rpal_0881 [Rhodopseudomonas palustris TIE-1]
 gi|39647737|emb|CAE26257.1| possible permease [Rhodopseudomonas palustris CGA009]
 gi|192283058|gb|ACE99438.1| protein of unknown function DUF81 [Rhodopseudomonas palustris
           TIE-1]
          Length = 320

 Score = 65.5 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 87/273 (31%), Gaps = 56/273 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L++      G +SG+FGVGGG +M P+L            I   VA+ +    +A +S
Sbjct: 27  VLLVLAMGAAVGFVSGMFGVGGGFLMTPLLIFI--------GISPAVAVASVTSHMAASS 78

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL------------MISHVDKSFLNKAF 130
               + + R   I+  +    +      T +               ++  V    L  + 
Sbjct: 79  FSGALSYWRRRAIDPLLAFVLLCGGIAGTGLGVWFFVLMRAVGQLDLVIAVSYVVLLTSV 138

Query: 131 AIFCLLMGILMLKRD------------------------RLYCERKFPDNYVKYIWGMVT 166
               +  GI  ++R                         R    + +         G++ 
Sbjct: 139 GGLMVYEGIRAIRRSNRGEVPLAGRSGNRNWLYALPFKVRFKRSKIYLSVLPVVAIGVLI 198

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           GF+   +GVGGG     ++++           TS  ++ +    A ++   +   ++ + 
Sbjct: 199 GFIGAVMGVGGGFILVPMLIYLLRVPTSTVVGTSMVLTLVTMLIATVLHAATSHLVDAVL 258

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                       LI++   +       +    I
Sbjct: 259 A-----------LILMIGGVTGAQFGARAGQRI 280



 Score = 43.1 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 43/121 (35%), Gaps = 8/121 (6%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           LY     V   +  +   +  ++    L G +  + GVGGG ++VP+L    +       
Sbjct: 170 LYALPFKVRFKRSKIYLSVLPVVAIGVLIGFIGAVMGVGGGFILVPMLIYLLR------- 222

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDK 123
           +     +GTS+ +   T +++ + H      ++  +    +          +     +  
Sbjct: 223 VPTSTVVGTSMVLTLVTMLIATVLHAATSHLVDAVLALILMIGGVTGAQFGARAGQRIRG 282

Query: 124 S 124
            
Sbjct: 283 E 283


>gi|331005743|ref|ZP_08329104.1| putative Permease [gamma proteobacterium IMCC1989]
 gi|330420460|gb|EGG94765.1| putative Permease [gamma proteobacterium IMCC1989]
          Length = 261

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 62/272 (22%), Positives = 95/272 (34%), Gaps = 34/272 (12%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L I+A  + G   G+ GVGGG +M P L     L G   +    VA+GT L   A T 
Sbjct: 5   FLLYIMAGAVVGLAVGITGVGGGSLMTPFLL----LFGFPPN----VAIGTDLLYAAITK 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLL 136
                 H++ G I   +++   +      ++TSL + ++          L  +  I  + 
Sbjct: 57  SGGIFSHQKQGNIQWDLVRRLAWGSIPAAIITSLALHYLFGDANEYSHILTFSLGIMLVF 116

Query: 137 MGILMLKRDRLYCERKFPDN----------YVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
              ++  R RL  E                 V  + G + G       VG G     ++ 
Sbjct: 117 TSSVLFFRSRLKVENHKAGGLLSFAHRHTAPVTIVMGAILGVFVTLSSVGAGAIGAAIL- 175

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
               ++Y A A    V   IA    L  I       G     LG V+   +  +L  S+ 
Sbjct: 176 ---MTLYPALAARKVVGVDIAHAVPLTFI------AGFAHLLLGNVDFVLLGSLLVGSLP 226

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              L  KLS  I    L    + I+      F
Sbjct: 227 AVVLGAKLSTKIPNNLLQPLLASILMVLGIKF 258



 Score = 35.4 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 43/117 (36%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IV   + G    L  VG G +   +L   +  +     + + +A         P + ++ 
Sbjct: 150 IVMGAILGVFVTLSSVGAGAIGAAILMTLYPALAARKVVGVDIAHA------VPLTFIAG 203

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
             H   G ++  +L   +       V+ + + + +  + L    A   +++GI  + 
Sbjct: 204 FAHLLLGNVDFVLLGSLLVGSLPAVVLGAKLSTKIPNNLLQPLLASILMVLGIKFVF 260


>gi|148243594|ref|YP_001228751.1| hypothetical protein SynRCC307_2495 [Synechococcus sp. RCC307]
 gi|147851904|emb|CAK29398.1| Uncharacterized conserved membrane protein [Synechococcus sp.
           RCC307]
          Length = 237

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 72/219 (32%), Gaps = 18/219 (8%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
              F L G+           T+L +    + +   +  R G +  +     + +      
Sbjct: 25  IAVFALAGLAPEQIRP----TALLLNVVVASLGSWQFWRAGHLQWRQFWPLLPLAVPAAF 80

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGA 172
           +   +   V    L     +  L   +  L R +   +   PD +     G   GF++G 
Sbjct: 81  LGGWL--DVPTRGLRVLLGVVLLSAAVRFLLRPQDPEQLAPPDRFSLLATGGGLGFMAGL 138

Query: 173 LGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF 231
            G GGG+F +  M+        +A A SA    + +   LL    SG  L  +P      
Sbjct: 139 TGTGGGVFLSPWMVLRRWCGTRQAAAASAVFILMNSIAGLLGFWRSGQPLPAVP------ 192

Query: 232 VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
                +LI+L        +    S+      +    +++
Sbjct: 193 --WAWLLIVLLAGGAGAYVG---SHRWAVPTIRRLLALV 226


>gi|225010824|ref|ZP_03701292.1| protein of unknown function DUF81 [Flavobacteria bacterium
           MS024-3C]
 gi|225005032|gb|EEG42986.1| protein of unknown function DUF81 [Flavobacteria bacterium
           MS024-3C]
          Length = 266

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 7/121 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +I++   + G L+G+ G GGG +++P L    +L        M  A+ TSL +IA  S+ 
Sbjct: 151 MIVLEGGVVGVLTGIVGAGGGFLIIPALVLFAKL-------PMKKAVATSLLIIAIKSLF 203

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            F+   +   I+   L  +  +      +   +   +    L K+F  F LLMG+ ++ +
Sbjct: 204 GFIGDVQTIVIDWMFLGSFTLLSIAGIFLGIYLSKFIPGHKLKKSFGWFVLLMGVYIMYK 263

Query: 145 D 145
           +
Sbjct: 264 E 264



 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 89/251 (35%), Gaps = 38/251 (15%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP+L           +I    A   SL V+  +S+    ++ + G +++K    +  
Sbjct: 28  ILTVPILVYLL-------AINPMTATAYSLFVVGTSSLFGAFQNFKKGLVDVKTALVFAT 80

Query: 106 VLPITTVVT-SLMISHVDKSFLN-------------KAFAIFCLLMGILMLKRDRLYCER 151
              I   VT   ++  +  +F +               FA   L+  + M++  +   E 
Sbjct: 81  PAFIAVYVTRRYIMPALPDTFFSVGTFVMTKNIAIMVFFAAIMLIAAVAMIRDKKKDNEG 140

Query: 152 K----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALI 206
           +      +  +  + G V G L+G +G GGG      ++ +    + KA ATS  + A+ 
Sbjct: 141 EEGPISYNYPMIVLEGGVVGVLTGIVGAGGGFLIIPALVLFAKLPMKKAVATSLLIIAIK 200

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           +    +  +        +  W      +G+  ++    I    L   LS  I    L   
Sbjct: 201 SLFGFIGDV-----QTIVIDWMF----LGSFTLLSIAGIF---LGIYLSKFIPGHKLKKS 248

Query: 267 FSMIMFTTSFV 277
           F   +      
Sbjct: 249 FGWFVLLMGVY 259


>gi|325265944|ref|ZP_08132630.1| transmembrane protein [Kingella denitrificans ATCC 33394]
 gi|324982582|gb|EGC18208.1| transmembrane protein [Kingella denitrificans ATCC 33394]
          Length = 259

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 92/265 (34%), Gaps = 24/265 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +   ++   F +G +    G GGGL+ +P L           S+       +  G +  
Sbjct: 8   SFFYYLLFIGFAAGLMDAAVG-GGGLLQIPGLFNLLPASTPVASVMGINKFASCCGTLTA 66

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T      ++ R   +  K+L     +    + + +  +++    ++  A  +  + M + 
Sbjct: 67  TG-----QYLRRIPVPWKMLLPAAALAFAASYLGANAVAYFPVHYMKPAMLVIMVAMCLY 121

Query: 141 MLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYK 194
              +  L    +             ++G + GF  G  G G G     + + FYG     
Sbjct: 122 TFLKKDLGQAVRTEKLTRRETLWGLLFGALIGFYDGIFGPGTGSLLAFVFVRFYGYDFLT 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A A++  +++     AL   I                V     + +   ++    L  +L
Sbjct: 182 ANASAKVINSTTNLAALAFFIPQD------------HVVWAWAVPLALANLCGGVLGARL 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVFA 279
           +   G K+L  GF +++  T   FA
Sbjct: 230 AIRGGTKFLRYGFMLLLCLTIGKFA 254


>gi|320157408|ref|YP_004189787.1| hypothetical protein YfcA [Vibrio vulnificus MO6-24/O]
 gi|319932720|gb|ADV87584.1| putative membrane protein YfcA [Vibrio vulnificus MO6-24/O]
          Length = 259

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 102/263 (38%), Gaps = 25/263 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  ++ +  +   + ++G +  + G GGGL+ +P L            +    A+ T+  
Sbjct: 2   DITIEMLAALFFVASVAGFIDAMAG-GGGLLTLPALLA--------SGLSPTQALATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  S  + +   R+G +++K +K  I    I   + + ++  +D S L     +  + 
Sbjct: 53  QSSFGSFSASLYFVRNGIVSLKEMKVAIACTFIGAAIGAELVQVIDASVLTSLIPVLLIA 112

Query: 137 MGILMLKRDRLY---CERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
           + +  L          + K  +       G   GF  G  G G G IFT   ++    S+
Sbjct: 113 ISLYFLLAPPTRNTGGQPKLSEAMFALSVGGGVGFYDGFFGPGTGSIFTVCFVVLGQFSL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++      ALL  + +G     LP W +G       L++     +   L  
Sbjct: 173 VEATARTKVLNFTSNIAALLFFVLAG-----LPVWKVG-------LVMAVGGFIGARLGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTS 275
           K+    G K++     ++    +
Sbjct: 221 KVVVTKGHKWIRPLVIVMSMAMA 243



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
              +    V GF+    G GGG+ T   +L  G S  +A AT+   S+  +F A L  + 
Sbjct: 9   AALFFVASVAGFIDAMAG-GGGLLTLPALLASGLSPTQALATNKLQSSFGSFSASLYFVR 67

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           +G             V++  + + +  + +   +  +L  +I    LT    +++   S 
Sbjct: 68  NGI------------VSLKEMKVAIACTFIGAAIGAELVQVIDASVLTSLIPVLLIAISL 115

Query: 277 VF 278
            F
Sbjct: 116 YF 117


>gi|75765159|ref|ZP_00744425.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|218895415|ref|YP_002443826.1| hypothetical protein BCG9842_B4966 [Bacillus cereus G9842]
 gi|228899025|ref|ZP_04063298.1| integral membrane protein [Bacillus thuringiensis IBL 4222]
 gi|228950850|ref|ZP_04112973.1| integral membrane protein [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229068050|ref|ZP_04201358.1| integral membrane protein [Bacillus cereus F65185]
 gi|229077653|ref|ZP_04210283.1| integral membrane protein [Bacillus cereus Rock4-2]
 gi|229188565|ref|ZP_04315604.1| integral membrane protein [Bacillus cereus ATCC 10876]
 gi|74487352|gb|EAO51302.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|218543848|gb|ACK96242.1| putative membrane protein [Bacillus cereus G9842]
 gi|228594754|gb|EEK52534.1| integral membrane protein [Bacillus cereus ATCC 10876]
 gi|228705594|gb|EEL57950.1| integral membrane protein [Bacillus cereus Rock4-2]
 gi|228715058|gb|EEL66925.1| integral membrane protein [Bacillus cereus F65185]
 gi|228808779|gb|EEM55275.1| integral membrane protein [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228860600|gb|EEN04987.1| integral membrane protein [Bacillus thuringiensis IBL 4222]
          Length = 256

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           ++     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   EELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLSPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S M   R G ++ KI+   I +  +  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAMYFIRSGKVDFKIVGKLIPLTIVGAVAGALVVKFIPSDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKNWGSVSTYKKMTQRKTLIFFFAILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|146282594|ref|YP_001172747.1| hypothetical protein PST_2246 [Pseudomonas stutzeri A1501]
 gi|145570799|gb|ABP79905.1| membrane protein, putative [Pseudomonas stutzeri A1501]
          Length = 261

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 93/263 (35%), Gaps = 25/263 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++   +F +G +  + G GGGL+ +P L  A         +  H+ +GT+      
Sbjct: 12  STLAILFAVAFTAGFIDAIAG-GGGLLTIPALLTA--------GLPPHLVLGTNKLSATF 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +     R       + +  +    I   V +L+   +  S+LN+   +     GI 
Sbjct: 63  GSATASYTFYRRRLFEPVVWRRALIGTAIGAAVGALLAQFMPASWLNQLLPLVVSACGIY 122

Query: 141 MLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
           +L      +   E        ++   +  GF  G  G G G F T   ML Y   + +A+
Sbjct: 123 LLFSKVPAKAAGEAAEIGRRRQWPQSLSLGFYDGVAGPGTGAFWTVSSMLLYPLDLLRAS 182

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++ +    AL V I              G V     + +    +       + + 
Sbjct: 183 GVARTMNFVSNAVALAVFIVG------------GHVAWVLGIGMGLALMTGAYFGARTAI 230

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G +++   F +++   S   A
Sbjct: 231 GGGSRFIRPVFILVVLAMSLRLA 253


>gi|305680640|ref|ZP_07403448.1| putative membrane protein [Corynebacterium matruchotii ATCC 14266]
 gi|305660171|gb|EFM49670.1| putative membrane protein [Corynebacterium matruchotii ATCC 14266]
          Length = 309

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 86/247 (34%), Gaps = 25/247 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA-MGTSLGVIAPTS 82
            LII A   +  + G  G+G G  +         +     S  +H A +GT+L       
Sbjct: 1   MLIIFAGAFAQLVDG--GIGMGFGVTSTTILLLSMGPAQASAVVHAAEVGTTLA------ 52

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H R G +N +++        I     + ++SH+         AI   L+G+ +L
Sbjct: 53  --SGLSHWRFGNVNWRVVLTLGVPGAIGAATGATLLSHIATDSAKPITAIILALVGVNLL 110

Query: 143 KR-DRLYCERKFPDNYVKYIWGMVTGFLSGAL-GVGGGIFTNL----LMLFYGASIYKAT 196
            R  R    R       +  + +  G   G +   GGG +  +    LM        +  
Sbjct: 111 WRFSRGVIARHNTPKPYRTPFLIFLGIFGGLIDATGGGGWGPITTSTLMSLGKEEPRRVV 170

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T      L+A  A +      W             N  AVL +L   +L  PL+  L +
Sbjct: 171 GTVNTAEFLVASAATMGFTLGLWQELQT--------NAVAVLCLLLGGVLTAPLSAWLIH 222

Query: 257 MIGKKYL 263
            +    L
Sbjct: 223 HMNPIIL 229


>gi|229183253|ref|ZP_04310483.1| integral membrane protein [Bacillus cereus BGSC 6E1]
 gi|228600392|gb|EEK57982.1| integral membrane protein [Bacillus cereus BGSC 6E1]
          Length = 255

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNY--VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +  +   +  V GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFVIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNVGALLMFMYVG 201



 Score = 35.8 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|15896987|ref|NP_341592.1| hypothetical protein SSO0015 [Sulfolobus solfataricus P2]
 gi|284173861|ref|ZP_06387830.1| hypothetical protein Ssol98_04280 [Sulfolobus solfataricus 98/2]
 gi|13813144|gb|AAK40382.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
 gi|261601640|gb|ACX91243.1| protein of unknown function DUF81 [Sulfolobus solfataricus 98/2]
          Length = 286

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 96/292 (32%), Gaps = 52/292 (17%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +++   +++ S LSG L  L G+GG   +VP+ +          ++ +  A G SL    
Sbjct: 5   IEFFVTVVLISALSGILGALTGLGGATFLVPIYTLYL-------NVPIAYASGASLISTI 57

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN----KAFAIFCL 135
            TS  +   + +    N+KI           ++  +L ++++    L       F I  L
Sbjct: 58  ATSSGAASAYVKDRITNVKIGMGLEIATTTGSIAGALTVAYIYAHHLEFIVYIVFGIVLL 117

Query: 136 LMGILMLKRDRLYCERKFPDNYVKY----------------------------IWGMVTG 167
               + L + +    +    ++                               I     G
Sbjct: 118 SQVYVQLAKSKFELPKPIKPDWTTRVFELYGKYYDTVLKQEVEYHGVRWWLGEIIMFFAG 177

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           F+SG LG+G G    L M +     +  +T TS  +  + A     +    G+    L  
Sbjct: 178 FISGLLGIGSGALKVLGMDWAMNLPMKVSTTTSNFMIGVTAATGSSIYWIFGYIQPFLAA 237

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +                ++   + TK+   +  K +   F+ I+       
Sbjct: 238 GT------------ALGVLIGAFVGTKILVRVTNKTIRYIFTAILIFLGIQM 277



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 48/121 (39%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +  F +G +SGL G+G G + V  +  A        ++ M V+  TS  +I  T+ 
Sbjct: 167 WLGEIIMFFAGFISGLLGIGSGALKVLGMDWAM-------NLPMKVSTTTSNFMIGVTAA 219

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +   G I   +       + I   V + ++  V    +   F    + +GI M+ 
Sbjct: 220 TGSSIYWIFGYIQPFLAAGTALGVLIGAFVGTKILVRVTNKTIRYIFTAILIFLGIQMIL 279

Query: 144 R 144
           R
Sbjct: 280 R 280


>gi|229189131|ref|ZP_04316157.1| integral membrane protein [Bacillus cereus ATCC 10876]
 gi|228594358|gb|EEK52151.1| integral membrane protein [Bacillus cereus ATCC 10876]
          Length = 255

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SILIILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K     + +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVK--YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V          GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFIVFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 179 AGNAKLLNLGSNVGALLMFMYVG 201



 Score = 35.8 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 51/120 (42%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   ++P++ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118


>gi|145635634|ref|ZP_01791331.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           PittAA]
 gi|145267107|gb|EDK07114.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           PittAA]
          Length = 255

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 101/239 (42%), Gaps = 25/239 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + ++    F++  +  + G GGGL+ +P L     + G+  +    +A+GT+     
Sbjct: 5   IDLLAILFCVGFVASFIDAIAG-GGGLITIPALL----MTGMPPA----MALGTNKLQAM 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ + +   R   +N++ +   +  + + + + +L+I  +D +   K      L++G+
Sbjct: 56  GGALSASLYFLRKRAVNLRDIWFILIWVFLGSALGTLLIQSIDVAIFRKILPFLILVIGL 115

Query: 140 LMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
             L   +L     +++        +     GF  G  G G G I +   +   G ++ KA
Sbjct: 116 YFLFTPKLGDKDRKQRLSYLLFGLLVSPFLGFYDGFFGPGTGSIMSLACVTLLGFNLPKA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           TA +  ++      +  + +  G  L     W +GFV       ++  SIL   L  K+
Sbjct: 176 TAHAKVMNFTSNLASFALFLLGGQIL-----WEVGFV-------MMAGSILGANLGAKM 222


>gi|228926091|ref|ZP_04089168.1| integral membrane protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228833527|gb|EEM79087.1| integral membrane protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 255

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNY--VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +  +   +  V GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFVIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNVGALLMFMYVG 201



 Score = 35.8 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|212635983|ref|YP_002312508.1| hypothetical protein swp_3214 [Shewanella piezotolerans WP3]
 gi|212557467|gb|ACJ29921.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 257

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 94/263 (35%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ +   ++G +  + G GGGL+ +P L      MG+      H+A+ T+       S 
Sbjct: 11  ALLALIGLIAGFIDAVAG-GGGLLSIPALLT----MGVPP----HMALATNKLAACFGSS 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+   + +    +  +         I  V+ + ++S +D  +L K   +  + + I  L 
Sbjct: 62  MAAYTYYKQRLFSPSLWYHTFIATFIGAVIGTFIVSIIDNRWLEKWLPLIIIAIAIYTLF 121

Query: 144 RDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
           +             K    + +++ G+  GF  G  G G G F  +     +   +  + 
Sbjct: 122 QPNAMGCKNCDIPVKPKSRFKQWLQGLPLGFYDGFAGPGIGAFWTVTSTGMHKLPLLYSL 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++      +L++    G             VNI   L +    ++   +    + 
Sbjct: 182 GLARAMTFTSNLTSLIIFFVMGQ------------VNISIGLAMGVCMMIGAYIGAHSAI 229

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F  ++   +   A
Sbjct: 230 KFGLPFIRPIFVTMILLIAAQLA 252


>gi|118476574|ref|YP_893725.1| hypothetical protein BALH_0847 [Bacillus thuringiensis str. Al
           Hakam]
 gi|118415799|gb|ABK84218.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 270

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 23  SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 73

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 74  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 133

Query: 141 MLKRDRL---YCERKFPDNY--VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +  +   +  V GF  G LG G G F    +LF G    KA
Sbjct: 134 TIFKKDWGSISTHKKLSGRHVIIFTFFIFVIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 193

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 194 AGTAKFLNLGSNVGALLMFMYVG 216



 Score = 35.4 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 27  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 82

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 83  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 133


>gi|228913036|ref|ZP_04076675.1| integral membrane protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228846441|gb|EEM91454.1| integral membrane protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 256

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 77/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLPPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G ++ KI+   I +  I  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAIYFIRSGKVDFKIVGKLIPLTVIGAVAGALVVKFISPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|70731415|ref|YP_261156.1| hypothetical protein PFL_4059 [Pseudomonas fluorescens Pf-5]
 gi|68345714|gb|AAY93320.1| membrane protein, putative [Pseudomonas fluorescens Pf-5]
          Length = 258

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/272 (16%), Positives = 103/272 (37%), Gaps = 38/272 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +VA  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 6   FVVAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPAT----AVGTDLLYAAITKSGG 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
            + H+++  I+ +I             +T   + ++D         + +      LL  +
Sbjct: 58  VLVHQKNRNIDWRITGWLTLGSVPAVALTLWFLKNLDTDPQALNAVIKQGLGFVLLLTAL 117

Query: 140 LMLKRDRLYCERKFPD----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLMLF 187
            ++ + +L    +             N +  + G++ G +     +G G      L +L+
Sbjct: 118 AIVFKKKLMAFAQRHGSDYQPSPGGLNGLTVVTGVILGTMVALTSIGAGALGTVALFILY 177

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
              +  +   T    +  +              + GL   S+G ++   +  +L  S+  
Sbjct: 178 PFLATKRLVGTEIAHAVPLTL------------VAGLGHASMGNMDWHLLGFLLMGSLPG 225

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             + + ++  I  + L    ++++F+  +  A
Sbjct: 226 IWIGSHMTGRISDEILRPCLAVMLFSIGYKLA 257



 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 29/58 (50%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            N+   + G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 2   GNFGFVVAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 59



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 42/119 (35%), Gaps = 6/119 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L +V   + GT+  L  +G G +    L   +  +           +GT +    P +++
Sbjct: 146 LTVVTGVILGTMVALTSIGAGALGTVALFILYPFL------ATKRLVGTEIAHAVPLTLV 199

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + + H   G ++  +L   +        + S M   +    L    A+    +G  +  
Sbjct: 200 AGLGHASMGNMDWHLLGFLLMGSLPGIWIGSHMTGRISDEILRPCLAVMLFSIGYKLAF 258


>gi|261323746|ref|ZP_05962943.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261299726|gb|EEY03223.1| conserved hypothetical protein [Brucella neotomae 5K33]
          Length = 230

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 75/209 (35%), Gaps = 37/209 (17%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + VA+F +  L G+ G+  G+ +VP+L+  F        I +HVA+  SL  +   S 
Sbjct: 13  LWLFVAAFGASMLGGMLGMASGIFIVPLLTSIF-------GIDIHVAIAASLISVIACSC 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S     +    N+++         +       +I  +  ++L   FAI  +L    ML 
Sbjct: 66  GSAAPLLKERLTNIRLAVVLETATTLGAFTGVFLIGVIPTAYLYLMFAIILVLSAWQMLV 125

Query: 144 RDRLYCERKFP--------------------DNYVKYIWGMV---------TGFLSGALG 174
           R R   +   P                      +  Y  G +          G +S  LG
Sbjct: 126 RRREMPQTNRPASRTWATLLRLHSAVPDRSSGKFTSYQVGSLPLGLSLMYGAGLVSALLG 185

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGV 202
           +G G+     M       I  ++ATS  +
Sbjct: 186 IGSGVLKIPAMDTALRLPIKVSSATSNFM 214


>gi|228937589|ref|ZP_04100227.1| integral membrane protein [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228970476|ref|ZP_04131127.1| integral membrane protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228977045|ref|ZP_04137448.1| integral membrane protein [Bacillus thuringiensis Bt407]
 gi|228782662|gb|EEM30837.1| integral membrane protein [Bacillus thuringiensis Bt407]
 gi|228789208|gb|EEM37136.1| integral membrane protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228822070|gb|EEM68060.1| integral membrane protein [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326938082|gb|AEA13978.1| hypothetical protein CT43_CH0285 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 256

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           ++     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   EELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLSPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S M   R G ++ KI+   I +  +  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAMYFIRSGKVDFKIVGKLIPLTIVGAVAGALVVKFIPSDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKNWGSVSTYKKMTQRKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|145628299|ref|ZP_01784100.1| hypothetical protein CGSHi22121_04640 [Haemophilus influenzae
           22.1-21]
 gi|144980074|gb|EDJ89733.1| hypothetical protein CGSHi22121_04640 [Haemophilus influenzae
           22.1-21]
          Length = 192

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 55/126 (43%), Gaps = 7/126 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I ++++    +  +S +FG+GGG++MVP+L   F        + + V   TSL ++  
Sbjct: 4   STIFILLICGICTNMVSAIFGIGGGVLMVPILRTLF------PELPIQVISATSLTIVMC 57

Query: 81  TSVMS-FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           T++++    H++   I+   +  W   + I   +   +  +   + ++  F +    + I
Sbjct: 58  TALINLLFFHKQKIKIDYINMILWSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAI 117

Query: 140 LMLKRD 145
                 
Sbjct: 118 KTFLNR 123



 Score = 38.1 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 51/128 (39%), Gaps = 13/128 (10%)

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM--LFYGASIYKATATSAGVSALIAFP 209
            F   ++  I G+ T  +S   G+GGG+    ++  LF    I   +ATS  +    A  
Sbjct: 2   AFSTIFILLICGICTNMVSAIFGIGGGVLMVPILRTLFPELPIQVISATSLTIVMCTALI 61

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            LL        ++        ++N   +++     ++   +  +LS+      +++ F++
Sbjct: 62  NLLFFHKQKIKID--------YIN---MILWSIAMVIGVQIGFELSFYFSTAIISLIFTV 110

Query: 270 IMFTTSFV 277
            +   +  
Sbjct: 111 SLSALAIK 118


>gi|307945370|ref|ZP_07660706.1| membrane protein [Roseibium sp. TrichSKD4]
 gi|307771243|gb|EFO30468.1| membrane protein [Roseibium sp. TrichSKD4]
          Length = 82

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/53 (45%), Positives = 38/53 (71%)

Query: 40 FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
          FG+GGG V+VPVL +    + +D+S+ MH+++ TSL +I PTS  SF+ H++ 
Sbjct: 23 FGIGGGAVLVPVLYQFLTFLQVDESVRMHISVATSLAIIIPTSTRSFLAHKKK 75


>gi|329122813|ref|ZP_08251385.1| membrane protein [Haemophilus aegyptius ATCC 11116]
 gi|327472077|gb|EGF17515.1| membrane protein [Haemophilus aegyptius ATCC 11116]
          Length = 269

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 95/264 (35%), Gaps = 12/264 (4%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I ++++    +  +S +FG+GGG++MVP+L   F        + + V   TSL ++  
Sbjct: 4   STIFILLICGICTNMVSAIFGIGGGVLMVPILRTLF------PELPIQVISATSLTIVMC 57

Query: 81  TSVMS-FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           T++++    H++   I+   +  W   + I   +   +  +     ++  F +    + I
Sbjct: 58  TALINLLFFHKQKIKIDYINMILWSIAMVIGVQIGFELSFYFSTVVISLIFTVSLSALAI 117

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMV-----TGFLSGALGVGGGIFTNLLMLFYGASIYK 194
                        F  + ++   G +               GG I   L+    G    +
Sbjct: 118 KTFLNRSRIQIEVFNMSPIERAKGSISFCGGGLISGITGIGGGSILAPLVGQLKGVKTQQ 177

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
               +  +  +     L   +   +  +      LG+VN   V ++   S  ++  + KL
Sbjct: 178 IAVYTNYMMIIGGIGNLYGYLTRAFPYDISLSGQLGYVNFFVVGVVTLGSFGMSFFSMKL 237

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
             +          ++I+F  +   
Sbjct: 238 RGLTNPALTRKLLAIILFCIAAYM 261


>gi|229068602|ref|ZP_04201902.1| integral membrane protein [Bacillus cereus F65185]
 gi|228714538|gb|EEL66413.1| integral membrane protein [Bacillus cereus F65185]
          Length = 255

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SILIILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K     + +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVK--YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V     +    GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFVFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 179 AGNAKLLNLGSNVGALLMFMYVG 201



 Score = 35.8 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 51/120 (42%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   ++P++ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118


>gi|39933441|ref|NP_945717.1| permease [Rhodopseudomonas palustris CGA009]
 gi|39647287|emb|CAE25808.1| possible permease [Rhodopseudomonas palustris CGA009]
          Length = 267

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 73/202 (36%), Gaps = 15/202 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + +  L G +  L G GG ++ VP+L     +         H+A+GTS   +A +++ + 
Sbjct: 13  VASGALVGFILALIGGGGSVLAVPLLVYVVGVR------SPHMAIGTSSIAVAISALANM 66

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           + H   G +       +           + +   VD   L   F +  +++G LML+++R
Sbjct: 67  LSHWAAGNVRWACAVVFSAAGIGGAFAGATIAKQVDGQKLLILFGLLMIVIGALMLRKNR 126

Query: 147 LYCERKFPDN--------YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
              +                    G   G L+G  G+GGG      L+L  G  +  A  
Sbjct: 127 GGGDPAVRLTRDTARAMLPRLIGTGFGVGLLAGFFGIGGGFLIVPGLILATGMPLTSAIG 186

Query: 198 TSAGVSALIAFPALLVRIYSGW 219
           TS                 SG 
Sbjct: 187 TSLVAVVAFGASTATSYALSGL 208



 Score = 35.8 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 14/124 (11%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG--ASIYKATATSAGVSALIAFPALLVR 214
            V    G + GF+   +G GG +    L+++     S + A  TS+   A+ A   +L  
Sbjct: 10  LVTVASGALVGFILALIGGGGSVLAVPLLVYVVGVRSPHMAIGTSSIAVAISALANMLS- 68

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                       W+ G V     ++     I        ++  +  + L I F ++M   
Sbjct: 69  -----------HWAAGNVRWACAVVFSAAGIGGAFAGATIAKQVDGQKLLILFGLLMIVI 117

Query: 275 SFVF 278
             + 
Sbjct: 118 GALM 121


>gi|228919230|ref|ZP_04082600.1| integral membrane protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228840337|gb|EEM85608.1| integral membrane protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 256

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 77/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLSPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S M   R G ++ KI+   I +  +  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAMYFIRSGKVDFKIVGKLIPLTIVGAVAGALVVKFIPSDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKNWGSVSTYKKMTQRKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|229090004|ref|ZP_04221256.1| integral membrane protein [Bacillus cereus Rock3-42]
 gi|228693351|gb|EEL47060.1| integral membrane protein [Bacillus cereus Rock3-42]
          Length = 255

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNY--VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +  +   +  V GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFVIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNVGALLMFMYVG 201



 Score = 35.4 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|254457967|ref|ZP_05071394.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
 gi|207085360|gb|EDZ62645.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
          Length = 243

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 60/156 (38%), Gaps = 1/156 (0%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
                +A+G ++  +  +SV     + + GT+++ ++        I  +++  + S  + 
Sbjct: 34  GYETKIAIGIAVVQMVFSSVFGSYLNNKKGTLDISMISTIGIGGFIGALLSGTIASSFND 93

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
             L   F  F +   + +  + +    ++  +    +I G   G LS  +GVGG I    
Sbjct: 94  ETLEMIFLAFAIFALLRLFFKTKEEKSQREVNKIALFIIGFFLGALSMTIGVGGSIILVP 153

Query: 184 LML-FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           +++ F    + KA +         +    +     G
Sbjct: 154 ILVGFLHVPLKKAISAGLFFVVFSSIAGFISHARLG 189



 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + +  F  G LS   GVGG +++VP+L            + +  A+   L  +  +S+
Sbjct: 127 IALFIIGFFLGALSMTIGVGGSIILVPILVGFLH-------VPLKKAISAGLFFVVFSSI 179

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
             F+ H R G I+ +          +       +   V+     +    F  L+ I +++
Sbjct: 180 AGFISHARLGHIDFESGLIIGLASLVGVYFGIHLKDIVNTVLQKRLLLSFYFLVVIYLVQ 239

Query: 144 R 144
           R
Sbjct: 240 R 240


>gi|152971255|ref|YP_001336364.1| hypothetical protein KPN_02717 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238895848|ref|YP_002920584.1| hypothetical protein KP1_3967 [Klebsiella pneumoniae NTUH-K2044]
 gi|262043375|ref|ZP_06016502.1| inner membrane protein YfcA [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|329997367|ref|ZP_08302750.1| hypothetical protein HMPREF9538_00386 [Klebsiella sp. MS 92-3]
 gi|150956104|gb|ABR78134.1| putative structural protein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238548166|dbj|BAH64517.1| putative structural protein [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259039287|gb|EEW40431.1| inner membrane protein YfcA [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328539116|gb|EGF65152.1| hypothetical protein HMPREF9538_00386 [Klebsiella sp. MS 92-3]
          Length = 269

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 96/236 (40%), Gaps = 25/236 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++   + L+G +  L G GGGL+ VP L       G+  +     A+ T+       S
Sbjct: 15  LVVLFFVAILAGFIDSLAG-GGGLLTVPALM----AAGMPPAQ----ALATNKLQACGGS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + +   R   +N+   K  I +  I +   +L++ HV    L +   +  + +G+  L
Sbjct: 66  LSATLYFVRRKVVNLADQKLNILMTFIGSTAGALLVQHVQSDILKQILPLLVIGIGLYFL 125

Query: 143 KRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
              +L     +R+        + G   GF  G  G G G F  L  +   G ++ K+TA 
Sbjct: 126 LMPKLGEADRQRRLYGLPFALVAGGSVGFYDGFFGPGAGSFYALAFVTLAGFNLAKSTAH 185

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           +  ++A      LL+ I  G  +     W+ GFV       ++    +     ++L
Sbjct: 186 AKLLNATSNVGGLLLFIIGGKVI-----WATGFV-------MMAGQFIGARAGSRL 229


>gi|325184964|emb|CCA19456.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 313

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 73/219 (33%), Gaps = 41/219 (18%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+A   +G LS L G+GGG +++PVL+K   L          +  GTS+G I  ++ +  
Sbjct: 41  IIAGSCAGILSALTGLGGGTILIPVLAKWTTL-------SQQIVNGTSIGAITVSTAVGS 93

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD- 145
             + R G  N  I         + +     +  ++    L+    +  +    L+L +  
Sbjct: 94  WNYFRQGACNYPIAFVTTLPAILCSRYGVRVAHNLSSKRLSLVGGVIMIAASPLILLKQS 153

Query: 146 ----------RLYCERKFPDNYVK----------------------YIWGMVTGFLSGAL 173
                          + FP                            + G V GF+SG  
Sbjct: 154 GHLPKFSKITHPLDLQLFPSEPGSIKSFWANASDDLLGFLGINCKYLVAGAVAGFISGLC 213

Query: 174 GVGGGIFTNLLMLFYGASIYKA-TATSAGVSALIAFPAL 211
           G GGGI     +        +A   TS       A  A 
Sbjct: 214 GTGGGILMTSYLTVVSDMPQEAIIGTSLLGIVPSASAAT 252



 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 8/123 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           C  +VA  ++G +SGL G GGG++M          + +   +     +GTSL  I P++ 
Sbjct: 197 CKYLVAGAVAGFISGLCGTGGGILMT-------SYLTVVSDMPQEAIIGTSLLGIVPSAS 249

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMGILML 142
            +   + +  TI++         L ++  +TS  +   + + FL     +      ++M 
Sbjct: 250 AATWYNIKAKTIHVPTSIRLGASLVVSMYLTSEYVTLQLSEDFLRGFLGVTLGAAAMVMF 309

Query: 143 KRD 145
           KR 
Sbjct: 310 KRS 312



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 40/122 (32%), Gaps = 13/122 (10%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLV 213
                 I G   G LS   G+GGG     ++  +   S      TS G          + 
Sbjct: 36  SRSATIIAGSCAGILSALTGLGGGTILIPVLAKWTTLSQQIVNGTSIG-------AITVS 88

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
                W       +  G  N     +    +IL +    ++++ +  K L++   +IM  
Sbjct: 89  TAVGSWNY-----FRQGACNYPIAFVTTLPAILCSRYGVRVAHNLSSKRLSLVGGVIMIA 143

Query: 274 TS 275
            S
Sbjct: 144 AS 145


>gi|323702095|ref|ZP_08113763.1| protein of unknown function DUF81 [Desulfotomaculum nigrificans DSM
           574]
 gi|323532977|gb|EGB22848.1| protein of unknown function DUF81 [Desulfotomaculum nigrificans DSM
           574]
          Length = 251

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 17/219 (7%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +  H A GTSL  +  T +   + +  +G++++            T    +   + + + 
Sbjct: 34  MSQHKAHGTSLVALVFTGLSGAITYALNGSVDIPASVFLASTAIFTARAGARFANALPEW 93

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY----VKYIWGMVTGFLSGALGVGGGIF 180
            L K+F  F +L+ +L+L +  L         +    +  + G  TGFLSG +GVGGG  
Sbjct: 94  KLKKSFGGFLILVTLLLLMKPYLSHISAPATGWLKIFILLLAGSFTGFLSGMMGVGGGSI 153

Query: 181 TNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
               M+   G S Y A   S      I                    W LG V+   +  
Sbjct: 154 MVPAMVLLTGFSQYTAQGCSLLAMIPIGGVGAFT------------HWRLGNVSTRILPG 201

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++   ++ T L   +++ + +  L I F++++  T+  +
Sbjct: 202 LISGILIGTYLGGSMAHFLSEGALRIIFALVLVQTAVRY 240



 Score = 63.9 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 7/128 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++++A   +G LSG+ GVGGG +MVP +               + A G SL  + P  
Sbjct: 129 IFILLLAGSFTGFLSGMMGVGGGSIMVPAMVLL-------TGFSQYTAQGCSLLAMIPIG 181

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +    H R G ++ +IL   I  + I T +   M   + +  L   FA+  +   +  L
Sbjct: 182 GVGAFTHWRLGNVSTRILPGLISGILIGTYLGGSMAHFLSEGALRIIFALVLVQTAVRYL 241

Query: 143 KRDRLYCE 150
           +  +   E
Sbjct: 242 RTPKPQPE 249


>gi|228931799|ref|ZP_04094695.1| integral membrane protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228827779|gb|EEM73517.1| integral membrane protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 256

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 77/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLPPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G ++ KI+   I +  +  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAIYFIRSGKVDFKIVGKLIPLTVVGAVAGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|261253640|ref|ZP_05946213.1| predicted permease [Vibrio orientalis CIP 102891]
 gi|260937031|gb|EEX93020.1| predicted permease [Vibrio orientalis CIP 102891]
          Length = 251

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 93/259 (35%), Gaps = 26/259 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + + S L+ TL+ L G G GL+  P+L            +    A+ T         + +
Sbjct: 9   LFLGSLLANTLASLSGGGAGLLQFPLLIFF--------GLPFSTALATHKIASVALGLGA 60

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM---- 141
              H ++ +   ++     FV  I  V+ + ++  + +    K      L +GI      
Sbjct: 61  AYTHIKNKSFPFRVAVYLFFVGSIGVVLGANIVLLIPEEIAKKMLGAMILALGIYSRLKK 120

Query: 142 -LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA-T 198
            L ++ +   R      +  I  M+ G ++G+L  G G+   L ++ ++G S  +A A T
Sbjct: 121 QLGQEEVPSHRDPLGWILGGISLMLIGVVNGSLTAGSGLLVTLFLVRWFGYSYKQAVALT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
              V         +    +G             +    + ++L  S L   L   L+   
Sbjct: 181 MLCVGLFWNGIGGIAVAQAGAP-----------IYWPWLPVLLLGSFLGGSLGAYLTTRY 229

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             K +   F ++ F     
Sbjct: 230 SNKVIKTCFEVLTFAVGIK 248


>gi|298209087|ref|YP_003717266.1| hypothetical protein CA2559_12623 [Croceibacter atlanticus
           HTCC2559]
 gi|83849014|gb|EAP86883.1| membrane protein, putative [Croceibacter atlanticus HTCC2559]
          Length = 267

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 7/123 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI++   + G L+G+ G GGG +++P L            + M  A+ TSL +IA  S++
Sbjct: 150 LILIEGAVVGVLTGIVGAGGGFLIIPALVLF-------AKLPMKKAVATSLLIIAIKSLI 202

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            F+   ++  I    L  +  +      +   + + +D   L K F  F L+MGI ++ +
Sbjct: 203 GFIGDIQNLDIEWSFLIIFSSLSVAGIFIGIWLNNFIDGKKLKKGFGWFVLVMGIYIILK 262

Query: 145 DRL 147
           + +
Sbjct: 263 ESI 265



 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 94/249 (37%), Gaps = 37/249 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP+L     +  I        A   SL V+  T+++  +++ + G I++K    +   
Sbjct: 29  LTVPILVYLLYINPI-------TATAYSLFVVGTTALVGAIKNLKKGLIDIKTAIVFSIP 81

Query: 107 LPITTVVT-SLMISHVDKSFLN-------------KAFAIFCLLMGILMLKRDRLYCERK 152
             I   +T   ++  +  +  +               FA+  L+  I M++  +    ++
Sbjct: 82  AFIAVYLTRKYLVPAIPDTLFSLGDFIVTKNIAIMIFFALIMLIAAITMIRDKKKTTTKE 141

Query: 153 FP---DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAF 208
                +  +  I G V G L+G +G GGG      ++ +    + KA ATS     +IA 
Sbjct: 142 EKIKFNYPLILIEGAVVGVLTGIVGAGGGFLIIPALVLFAKLPMKKAVATSL---LIIAI 198

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            +L+  I     L+         +    ++I   +S+    +   L+  I  K L  GF 
Sbjct: 199 KSLIGFIGDIQNLD---------IEWSFLIIFSSLSVAGIFIGIWLNNFIDGKKLKKGFG 249

Query: 269 MIMFTTSFV 277
             +      
Sbjct: 250 WFVLVMGIY 258


>gi|326387400|ref|ZP_08209009.1| hypothetical protein Y88_0925 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208056|gb|EGD58864.1| hypothetical protein Y88_0925 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 261

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 93/242 (38%), Gaps = 24/242 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + + +  +GT+  + G GGGLVM+PVL        +   +  H+ +GT+       + ++
Sbjct: 20  LTLVAVATGTVDAIAG-GGGLVMMPVL--------VSTGLPPHLVLGTNKLQSICGTAVA 70

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
               RR G ++++       +     VV +L+I  +D   L     +F + + +  +   
Sbjct: 71  TWRFRRAGFLSLRKGAMMALLAFAGAVVGALLIRRIDAHALRLIVPLFLIGVALYTIFSP 130

Query: 146 RLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATSAGV 202
           R+     R    +          GF  G  G G G F    L+   G  + +A   +  +
Sbjct: 131 RMDDGERRDLLGDKGYAPLATGIGFYDGFFGPGAGQFYAASLVSLRGMGLTRAMGLTKLL 190

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
           + +    +L+V    G             V     L++   ++    + ++L+   G + 
Sbjct: 191 NVMSNLGSLVVFALGGQ------------VIWPLGLVMGLGAMTGAVIGSRLATRHGARV 238

Query: 263 LT 264
           + 
Sbjct: 239 IR 240


>gi|14521378|ref|NP_126854.1| hypothetical protein PAB0782 [Pyrococcus abyssi GE5]
 gi|5458596|emb|CAB50084.1| Predicted permease [Pyrococcus abyssi GE5]
          Length = 245

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 83/248 (33%), Gaps = 26/248 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +   ++  F  G L GL G+GGG +M P L            +    A+GT L     T 
Sbjct: 1   MLTFVLLGFTVGFLVGLTGIGGGALMTPSLIFL--------GVEPLTAVGTDLLYATITR 52

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK---SFLNKAFAIFCLLMGI 139
           +   +   R G I   I    +       ++   +I +  +    +L     +  +   I
Sbjct: 53  IFGIVFRYRKGRIRTDIALKLLAGSVPAILIGGFLIRYFTQVINEYLTIFLGVVLVSSSI 112

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
           L L ++     +  P     Y+ G + GF+     +G G+  +  L+             
Sbjct: 113 LGLIKEIKLPVK--PKVIYVYLLGFIVGFIVQFTSIGAGVIVSFALLNVARVDPRDVIGI 170

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +      ++  +    +             LG VN   +L++   SI      T LS   
Sbjct: 171 TLLYGLGLSLISSTSYLI------------LGKVNYNILLLLTIGSIPGVYTGTLLSSTT 218

Query: 259 GKKYLTIG 266
            K+ L   
Sbjct: 219 DKEKLKKI 226


>gi|320104497|ref|YP_004180088.1| hypothetical protein Isop_2974 [Isosphaera pallida ATCC 43644]
 gi|319751779|gb|ADV63539.1| protein of unknown function DUF81 [Isosphaera pallida ATCC 43644]
          Length = 123

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 8/125 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPTSV 83
            +I     +G LSG+FG+GGGLV+VPVL+  F       ++    A+GTSL  ++ P  +
Sbjct: 6   WMIGLGLGAGILSGMFGIGGGLVIVPVLALVF-------AVDQKTAVGTSLFALMFPVGI 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +  +E+ R   I           L     + +L++  +    + + + +F +++G+  L 
Sbjct: 59  LGVLEYARRKEILYASGLWIALGLLAGAYLGALLVGKLSPLTMKRLYGVFLIVVGVYYLY 118

Query: 144 RDRLY 148
             R  
Sbjct: 119 STRGK 123



 Score = 43.1 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 38/128 (29%), Gaps = 14/128 (10%)

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSA-GVSALIAFPA 210
            P  +     G+  G LSG  G+GGG+    ++   +      A  TS   +   +    
Sbjct: 1   MPATHWMIGLGLGAGILSGMFGIGGGLVIVPVLALVFAVDQKTAVGTSLFALMFPVGILG 60

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           +L              ++ G       L I    +    L   L   +    +   + + 
Sbjct: 61  VLEY-----ARRKEILYASG-------LWIALGLLAGAYLGALLVGKLSPLTMKRLYGVF 108

Query: 271 MFTTSFVF 278
           +      +
Sbjct: 109 LIVVGVYY 116


>gi|218441845|ref|YP_002380174.1| hypothetical protein PCC7424_4952 [Cyanothece sp. PCC 7424]
 gi|218174573|gb|ACK73306.1| protein of unknown function DUF81 [Cyanothece sp. PCC 7424]
          Length = 262

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/240 (20%), Positives = 91/240 (37%), Gaps = 22/240 (9%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V+VP+L    Q       +    A+ TSL  I  TS+   +++ R G +++K +     
Sbjct: 28  TVLVPLLIAIHQNQSNYQPVN---AVATSLLAIVITSISGSIQNWRMGYLDIKRVIYIAI 84

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL--YCERKFPDNYVKYIWG 163
               T  + + + + V    L  +FA+  +    L   R RL      +   N   +I  
Sbjct: 85  PSLFTAQLGAYLANLVPDYILLGSFAVLLIATIFLTNLRKRLASRTNNESSQNTNLFISY 144

Query: 164 MVTGFLSGALG-----VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           ++ G   G L       GG I   L ML    +I K+  TS G+  + +  A     + G
Sbjct: 145 LIIGGSGGLLAGFFGVGGGVIMVPLQMLLIKENIKKSVQTSLGIIVVTSIAACAGHAWQG 204

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             +  L  + LG              ++   ++T+    +  K ++  F  ++   S  F
Sbjct: 205 -NVKFLEGFLLG-----------IGGLIGAQISTRFLPKLPDKVVSFLFRTLLAILSVYF 252



 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 7/124 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +     ++     G L+G FGVGGG++MVP+     +         +  ++ TSLG+I  
Sbjct: 139 NLFISYLIIGGSGGLLAGFFGVGGGVIMVPLQMLLIKEN-------IKKSVQTSLGIIVV 191

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           TS+ +   H   G +             I   +++  +  +    ++  F     ++ + 
Sbjct: 192 TSIAACAGHAWQGNVKFLEGFLLGIGGLIGAQISTRFLPKLPDKVVSFLFRTLLAILSVY 251

Query: 141 MLKR 144
              +
Sbjct: 252 FFWK 255


>gi|224437815|ref|ZP_03658762.1| hypothetical protein HcinC1_07575 [Helicobacter cinaedi CCUG 18818]
          Length = 260

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 94/246 (38%), Gaps = 24/246 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +  +I  +F++G +  + G GGG++ +P L  A    GI        A+GT+       
Sbjct: 13  LVVFLIACAFVAGFVDSIAG-GGGMITIPALLFA----GIPPLQ----ALGTNKFQSCFG 63

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + +   + G I++K    ++ V+ +++++ S+ +   +  FL K      ++     
Sbjct: 64  SFGASLHFYKRGHIDLKGSVGFVCVVFLSSILGSVCVGLFESDFLRKCIPFLLIIFAFYF 123

Query: 142 LKRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATAT 198
           L   ++     +    +        + GF  G  G G G  F   L+   G S+ +A A 
Sbjct: 124 LFSPKITQDSSKAILGSAGLGFVLGIIGFYDGFFGPGTGSFFMLSLITLGGFSLLQALAN 183

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +   +      ++LV  +             G +     L +         L ++++   
Sbjct: 184 AKLFNFATNLASMLVFAFG------------GHILWIVGLCMALGQFAGASLGSRIAIGY 231

Query: 259 GKKYLT 264
           G K + 
Sbjct: 232 GVKIIK 237


>gi|229089423|ref|ZP_04220694.1| integral membrane protein [Bacillus cereus Rock3-42]
 gi|228693900|gb|EEL47592.1| integral membrane protein [Bacillus cereus Rock3-42]
          Length = 256

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 77/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLPPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G ++ KI+   I +  I  V  +L+I  +    L     +  +
Sbjct: 53  LAATMGTFTSAIYFIRSGKVDFKIVGKLIPLTVIGAVAGALVIKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|317131597|ref|YP_004090911.1| protein of unknown function DUF81 [Ethanoligenens harbinense
           YUAN-3]
 gi|315469576|gb|ADU26180.1| protein of unknown function DUF81 [Ethanoligenens harbinense
           YUAN-3]
          Length = 281

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 86/258 (33%), Gaps = 48/258 (18%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+  F        I +  A+G S+  +  TS  + + + +    N+++         +
Sbjct: 36  PALTLLF-------GIDIKYAVGASIVSVIATSSGAAVAYIKDKITNVRVGMFLEIGTTL 88

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP--------------- 154
             +  + +   +   +L   F +  L   +++LK+ +    ++                 
Sbjct: 89  GAITGAFLSGIIHSQWLYIIFGLLLLYSSVMILKKSKSELPQRVENHPVAQKLALNGAYY 148

Query: 155 -------------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA 200
                          Y       V G +SG LG+G G+F  + M LF    +  ++ATS 
Sbjct: 149 DKVLGRQVVYNVAGVYGGLGMMYVAGVVSGLLGIGSGMFKVMAMDLFMKLPLKVSSATSN 208

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  + A  +  V    G     +               +    +L   + T++   +  
Sbjct: 209 FMIGVTAAASAGVYFLRGDIDPKI------------AAPVALGVLLGATVGTRVMERLRS 256

Query: 261 KYLTIGFSMIMFTTSFVF 278
           + L   F+ ++   S   
Sbjct: 257 RTLRYIFAPVLVVVSIQM 274



 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           +++G +SGL G+G G+  V         M +   + + V+  TS  +I  T+  S   + 
Sbjct: 171 YVAGVVSGLLGIGSGMFKV-------MAMDLFMKLPLKVSSATSNFMIGVTAAASAGVYF 223

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I+ KI       + +   V + ++  +    L   FA   +++ I M+ +
Sbjct: 224 LRGDIDPKIAAPVALGVLLGATVGTRVMERLRSRTLRYIFAPVLVVVSIQMIVK 277


>gi|228906070|ref|ZP_04069959.1| integral membrane protein [Bacillus thuringiensis IBL 200]
 gi|228853479|gb|EEM98247.1| integral membrane protein [Bacillus thuringiensis IBL 200]
          Length = 256

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           ++     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   EELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLSPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S M   R G ++ KI+   I +  +  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAMYFIRSGKVDFKIVGKLIPLTIVGAVAGALVVKFIPSDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKNWGSVSTYKKMTQRKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|255068233|ref|ZP_05320088.1| putative integral membrane protein [Neisseria sicca ATCC 29256]
 gi|255047503|gb|EET42967.1| putative integral membrane protein [Neisseria sicca ATCC 29256]
          Length = 256

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 91/265 (34%), Gaps = 24/265 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +  L+++  F +G +    G GGGL+ +P L           S+       +  G +  
Sbjct: 5   SFFYLLLLTGFCAGLMDAAVG-GGGLLQIPGLFNLLPTSTPVASVMGVNKFASCCGTVTA 63

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T      ++ R   +  K+L     +    + + +  +      ++  A  +  + M + 
Sbjct: 64  TG-----QYLRRIPVPWKMLLPAAVLAFAASYLGAKAVVFFPVQYMKPAMLVIMIAMCVY 118

Query: 141 MLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYK 194
              +  L    +              +G + GF  G  G G G     + + FYG     
Sbjct: 119 TFIKKDLGQTVRTEKLTRRETLWGLFFGALIGFYDGIFGPGTGSLLAFVFVRFYGYDFLT 178

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A A+   +++     AL   I              G V     + +   ++    +  KL
Sbjct: 179 ANASGKVINSTTNLAALTFFIPQ------------GHVVWTWAIPLALANLCGGVVGAKL 226

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVFA 279
           +   G ++L  GF +++  T   FA
Sbjct: 227 AIRGGTQFLRYGFMVLLCLTIGKFA 251


>gi|260881228|ref|ZP_05403941.2| putative membrane protein [Mitsuokella multacida DSM 20544]
 gi|260849335|gb|EEX69342.1| putative membrane protein [Mitsuokella multacida DSM 20544]
          Length = 266

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 76/222 (34%), Gaps = 25/222 (11%)

Query: 58  LMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM 117
           L+ +   + +H A+  +L  +  T +   + H R   + +K              + +  
Sbjct: 41  LLTVGFHVPIHTALAVALASMVFTMLSGTISHFRQHEVLVKTGAIMGLGGITGAYLGANF 100

Query: 118 ISHVDKSFLNKAFAIFCLLMGILM--------LKRDRLYCERKFPDNYVKYIWGMVT--- 166
            + V  + L+           + +             +   ++       +I+G++    
Sbjct: 101 SNIVPSNILSAITGFMLASSAVTLYIKMYQAEWLGRHIKIRQEPLTGRKLWIYGILIGIF 160

Query: 167 -GFLSGALGVGGGI-FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            GFLSGA G+G        LM+ +G  + +   T   V   I+    L  +++G      
Sbjct: 161 MGFLSGAFGIGAAAYIQLALMVVFGVPLLQTIGTCMMVILPISAAGGLSYLFNGR----- 215

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
                  ++    +  L   ++      K++++   + L + 
Sbjct: 216 -------LDFPIFIQTLAGLMIGAWFGAKMTHLAPLRLLRVF 250



 Score = 43.5 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 7/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              I+     G LSG FG+G    +   L   F        + +   +GT + VI P S 
Sbjct: 152 IYGILIGIFMGFLSGAFGIGAAAYIQLALMVVF-------GVPLLQTIGTCMMVILPISA 204

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + +  +G ++  I    +  L I     + M        L         + GI+M+ 
Sbjct: 205 AGGLSYLFNGRLDFPIFIQTLAGLMIGAWFGAKMTHLAPLRLLRVFIVGMPAVGGIVMIL 264


>gi|229845190|ref|ZP_04465324.1| hypothetical protein CGSHi6P18H1_03036 [Haemophilus influenzae
           6P18H1]
 gi|229811901|gb|EEP47596.1| hypothetical protein CGSHi6P18H1_03036 [Haemophilus influenzae
           6P18H1]
          Length = 255

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 102/239 (42%), Gaps = 25/239 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + ++    F++  +  + G GGGL+ +P L     + G+  +    +A+GT+     
Sbjct: 5   IDLLAILFCVGFVASFIDAIAG-GGGLITIPALL----MTGMPPA----MALGTNKLQAM 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ + +   R   +N++ +   +  + + + + +L+I  +D +   K      L++G+
Sbjct: 56  GGALSASLYFLRKRAVNLRDIWFILIWVFLGSALGTLLIQSIDVAIFRKILPFLILVIGL 115

Query: 140 LMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
             L   +L     +++        +     GF  G  G G G I +   +   G ++ KA
Sbjct: 116 YFLFTPKLGDKDRKQRLSYLLFGLLVSPFLGFYDGFFGPGTGSIMSLACVTLLGFNLPKA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           T+ +  ++      +  + + SG  L     W +GFV       ++  SIL   L  K+
Sbjct: 176 TSHAKVMNFTSNLASFTLFLLSGQIL-----WKVGFV-------MMAGSILGANLGAKM 222


>gi|237748275|ref|ZP_04578755.1| YdhB protein [Oxalobacter formigenes OXCC13]
 gi|229379637|gb|EEO29728.1| YdhB protein [Oxalobacter formigenes OXCC13]
          Length = 250

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 73/215 (33%), Gaps = 26/215 (12%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           +I +H A+GTSL  +  T++     H R G +N+KI             + S + + +  
Sbjct: 28  NIPIHTAVGTSLAAMIFTTLSGAFSHFREGNMNIKIGLTVGLSGACGAFIGSKISTLLPG 87

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
           S L    A   +   IL+  R                  + G     L+G  GVG G+ +
Sbjct: 88  SELKFFTASMLIASAILVYTRLTYPNLPLFHLKQGQSADLTGSRFWLLAGLTGVGNGLLS 147

Query: 182 NLL------------MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
                          ++F+   +Y +  T+  +   IA    L  + SG+    L     
Sbjct: 148 GTFGFGAAQFIQLSLLIFFAMPLYHSVGTTMLIILPIAAFGGLGYLLSGYLDFML----- 202

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
                   + +L   ++   +  K +       L 
Sbjct: 203 -------FIQVLLGLMIGAYVGAKFTRHAPGWLLK 230



 Score = 38.1 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 7/116 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +    +G LSG FG G    +   L   F       ++ ++ ++GT++ +I P +    +
Sbjct: 138 LTGVGNGLLSGTFGFGAAQFIQLSLLIFF-------AMPLYHSVGTTMLIILPIAAFGGL 190

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   G ++  +    +  L I   V +    H     L     +   + G+LM+ 
Sbjct: 191 GYLLSGYLDFMLFIQVLLGLMIGAYVGAKFTRHAPGWLLKWMMVLLPGVAGLLMIL 246


>gi|229148697|ref|ZP_04276947.1| integral membrane protein [Bacillus cereus m1550]
 gi|228634705|gb|EEK91284.1| integral membrane protein [Bacillus cereus m1550]
          Length = 256

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           ++     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   EELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLSPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S M   R G ++ KI+   I +  +  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAMYFIRSGKVDFKIVGKLIPLTIVGAVAGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKNWGSVSTYKKMTQRKTLIFFFAILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|264676419|ref|YP_003276325.1| hypothetical protein CtCNB1_0284 [Comamonas testosteroni CNB-2]
 gi|262206932|gb|ACY31030.1| hypothetical protein CtCNB1_0284 [Comamonas testosteroni CNB-2]
          Length = 252

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 92/250 (36%), Gaps = 25/250 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ +AS L+G +  + G GGGL++VP +  AF       +       GT+       + 
Sbjct: 4   ILVSLASALAGFVDAIVG-GGGLILVPAMFAAF------PTTTPATLFGTNKSAAVWGTA 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +S  ++ +   I    L   I    +   + +  ++ +   FL K      L +    L 
Sbjct: 57  ISAWQYSKRVHITWATLLPAIGTTLVGAFLGAWAVTLISPDFLRKLLPFILLGVLGYTLA 116

Query: 144 RDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATA 197
           +  L  + +       +       G++ GF  G  G G G F   L +   G     A+A
Sbjct: 117 KKELGRDHEPRLAGRTEMLTASAIGLLIGFYDGFFGPGTGSFFVFLFVRLLGYDFLNASA 176

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           ++  ++      ALL+                G V     + +   ++L + L T ++  
Sbjct: 177 SAKLLNLASNAAALLLFTLK------------GHVWWHFAIPLAVANVLGSMLGTWMALR 224

Query: 258 IGKKYLTIGF 267
            G  ++   F
Sbjct: 225 HGTGFVRTIF 234


>gi|261820755|ref|YP_003258861.1| hypothetical protein Pecwa_1455 [Pectobacterium wasabiae WPP163]
 gi|261604768|gb|ACX87254.1| protein of unknown function DUF81 [Pectobacterium wasabiae WPP163]
          Length = 266

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 90/238 (37%), Gaps = 25/238 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + ++     L+G +  + G GGGL+ +P L       G+  +      + T+      
Sbjct: 9   EMLAVLFFVGALAGFIDSIAG-GGGLLTIPALL----AAGLSPAQV----LATNKLQAVG 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R   +N+   K  I +  + +   + +I  +   FL +      + +G+ 
Sbjct: 60  GSFSASLYFIRRRAVNLGEQKLAIALTFVGSTFGAWLIQQIHADFLRQLLPFLIIGIGLY 119

Query: 141 MLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L   ++  E   R+        + G   GF  G  G G G F  L  +   G ++ KAT
Sbjct: 120 FLLTPKIGDEDRQRRLSPLPFAIVAGGCVGFYDGFFGPGAGSFYALAFVTLSGFNLAKAT 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A +  ++    F  LL  + SG  +  +              ++L   IL   L  ++
Sbjct: 180 ANAKILNFTSNFGGLLFFMLSGKVVWVV------------GGVMLIGQILGARLGARM 225


>gi|30018551|ref|NP_830182.1| hypothetical protein BC0343 [Bacillus cereus ATCC 14579]
 gi|218232281|ref|YP_002365137.1| hypothetical protein BCB4264_A0354 [Bacillus cereus B4264]
 gi|228956730|ref|ZP_04118516.1| integral membrane protein [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229042195|ref|ZP_04189949.1| integral membrane protein [Bacillus cereus AH676]
 gi|229107969|ref|ZP_04237596.1| integral membrane protein [Bacillus cereus Rock1-15]
 gi|229125794|ref|ZP_04254820.1| integral membrane protein [Bacillus cereus BDRD-Cer4]
 gi|229143092|ref|ZP_04271525.1| integral membrane protein [Bacillus cereus BDRD-ST24]
 gi|296501123|ref|YP_003662823.1| hypothetical protein BMB171_C0285 [Bacillus thuringiensis BMB171]
 gi|29894092|gb|AAP07383.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579]
 gi|218160238|gb|ACK60230.1| putative membrane protein [Bacillus cereus B4264]
 gi|228640365|gb|EEK96762.1| integral membrane protein [Bacillus cereus BDRD-ST24]
 gi|228657651|gb|EEL13463.1| integral membrane protein [Bacillus cereus BDRD-Cer4]
 gi|228675472|gb|EEL30689.1| integral membrane protein [Bacillus cereus Rock1-15]
 gi|228727130|gb|EEL78333.1| integral membrane protein [Bacillus cereus AH676]
 gi|228802918|gb|EEM49750.1| integral membrane protein [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|296322175|gb|ADH05103.1| hypothetical protein BMB171_C0285 [Bacillus thuringiensis BMB171]
          Length = 256

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           ++     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   EELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLSPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S M   R G ++ KI+   I +  +  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAMYFIRSGKVDFKIVGKLIPLTIVGAVAGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKNWGSVSTYKKMTQRKTLIFFFAILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|296141695|ref|YP_003648938.1| hypothetical protein Tpau_4028 [Tsukamurella paurometabola DSM
           20162]
 gi|296029829|gb|ADG80599.1| protein of unknown function DUF81 [Tsukamurella paurometabola DSM
           20162]
          Length = 285

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 7/125 (5%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + +  V   + G  S   G+GGGL++VPV++  F          +H A GTSL V+ P 
Sbjct: 156 IVAVATVTGLIVGAYSAAMGLGGGLLVVPVMAVLFGAN-------LHTAAGTSLLVMLPN 208

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +++  + H RHG+ ++++ K         ++V   +   + +  L      F   + +  
Sbjct: 209 AIVGAVTHIRHGSADLRVGKPLALAALPGSLVGVSLALALPERGLAAVLGTFMAFLAVRE 268

Query: 142 LKRDR 146
           + R R
Sbjct: 269 VLRWR 273



 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 82/231 (35%), Gaps = 22/231 (9%)

Query: 57  QLMGIDDSICMHVAMGTS-LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
             +    ++  HV  GTS L  ++   V S +   R G +++      +    +   V +
Sbjct: 49  PALDRHSTLPRHVIHGTSTLANVSAALVGSIVYALRGGHVDIVPGIGLMIGGVVGAYVGA 108

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY--------VKYIWGMVTG 167
             +S V ++ L   F +   L     L +            +        V  + G++ G
Sbjct: 109 RWVSKVPEAVLRSLFVLVLTLSATKFLLQAFGIQVGSSSGLFEGTALIVAVATVTGLIVG 168

Query: 168 FLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
             S A+G+GGG+    +M + +GA+++ A  TS  V    A    +  I  G        
Sbjct: 169 AYSAAMGLGGGLLVVPVMAVLFGANLHTAAGTSLLVMLPNAIVGAVTHIRHGSADLR--- 225

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                V     L  LP S+    +   L+  + ++ L       M   +  
Sbjct: 226 -----VGKPLALAALPGSL----VGVSLALALPERGLAAVLGTFMAFLAVR 267


>gi|217077973|ref|YP_002335691.1| transporter [Thermosipho africanus TCF52B]
 gi|217037828|gb|ACJ76350.1| transporter [Thermosipho africanus TCF52B]
          Length = 254

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 75/216 (34%), Gaps = 18/216 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +    FL+G +  + G GGGL+ +P              I  H A+ T+    +  S+
Sbjct: 9   LFLFFMIFLAGFVDSIAG-GGGLISLPAYLFL--------GIPSHNALATNKLSSSIGSI 59

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S   + +   +  +I         + +   + +   +  S+L    ++  +  G  ML 
Sbjct: 60  FSTFRYAKERYVVFEIGIISAIFSFLGSFFGARLALLISDSYLKVIISVLIVFAGAFMLM 119

Query: 144 RDRLYCERKFPDN------YVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
             R     K P        ++    G + G   G  G G G     +   F       A+
Sbjct: 120 NKRKKVISKIPKTSFKKKFFISSFIGFIIGMYDGFFGPGTGTFLIIMYTSFLSFDSISAS 179

Query: 197 ATSAGVSALIAFPALLVRIYSG--WGLNGLPPWSLG 230
           AT+  V+      AL+  + +G      GLP    G
Sbjct: 180 ATAKIVNLSSNISALIAFLINGKVLFHIGLPAAFFG 215


>gi|126653933|ref|ZP_01725777.1| hypothetical protein BB14905_00470 [Bacillus sp. B14905]
 gi|126589593|gb|EAZ83733.1| hypothetical protein BB14905_00470 [Bacillus sp. B14905]
          Length = 226

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 84/210 (40%), Gaps = 14/210 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  D  ++ + ++IV  FL+  +  + G GGGL+ +P L       G+  S     A+ T
Sbjct: 1   MPFDLDLNILVILIVFGFLAAFIDSVVG-GGGLISLPALMFV----GLPPSS----AVAT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S+ S +   R G +++K +      +   +++ + ++  +D S L       
Sbjct: 52  NKLAGTMGSLTSTLTFYRSGKLDIKAVYKLFPFVFFGSMLGAWVVHLMDPSVLKPLMLFM 111

Query: 134 CLLMGILMLKRDRLYCERKF----PDNYVKYIWG-MVTGFLSGALGVGGGIFTNLLMLFY 188
              + I  + +        F    P  Y+ ++      GF  G LG G G F     L  
Sbjct: 112 LAAVAIYTIFKKDWGSITTFKKLTPKRYLFFVVVITGIGFYDGFLGPGTGSFLLFAFLMV 171

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSG 218
           G    ++   +  ++      ALL+ IY G
Sbjct: 172 GFDFLQSAGNAKFLNFGSNVAALLMFIYLG 201



 Score = 35.4 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 45/120 (37%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G +  F+   +G GGG+ +   ++F G     A AT+     + +  + L     
Sbjct: 12  ILIVFGFLAAFIDSVVG-GGGLISLPALMFVGLPPSSAVATNKLAGTMGSLTSTLTF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G ++I AV  + P     + L   + +++    L      ++   +  
Sbjct: 68  ---------YRSGKLDIKAVYKLFPFVFFGSMLGAWVVHLMDPSVLKPLMLFMLAAVAIY 118


>gi|319956623|ref|YP_004167886.1| hypothetical protein Nitsa_0877 [Nitratifractor salsuginis DSM
           16511]
 gi|319419027|gb|ADV46137.1| protein of unknown function DUF81 [Nitratifractor salsuginis DSM
           16511]
          Length = 249

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 100/259 (38%), Gaps = 25/259 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +C +  A  ++G +  + G GGG++ +P L       G+      H A+ T+    +  S
Sbjct: 8   LCWLFFAGVMAGFVDSIAG-GGGIITLPALL----AAGVPP----HQALATNKLQSSFGS 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + M + R G +N + L   +    I     + ++       L     +  +++ I   
Sbjct: 59  FTATMNYARLGLMNPRELLLGVLFTLIGAAAGARVVQRFPADRLESLIIVMLIVIFIYTA 118

Query: 143 KRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
              +L  E    K P      I+G++ GF  G  G G G F  + L+L  G  +  ATA 
Sbjct: 119 LTPKLGLEPKPHKIPHALFYTIFGLLIGFYDGFFGPGTGSFWTMGLVLLLGLDLKAATAQ 178

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +   +      +L V +Y+G             V     +++    +L   + + L +  
Sbjct: 179 TKLFNFTSNIVSLAVFVYAGL------------VLWIVGIVMGTGQVLGAWMGSNLVHKR 226

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             K++   F +++  T   
Sbjct: 227 EVKFVRSFFLIVVGATILK 245



 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 13/130 (10%)

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
                     +  G++ GF+    G GGGI T   +L  G   ++A AT+   S+  +F 
Sbjct: 2   THDLLSLCWLFFAGVMAGFVDSIAG-GGGIITLPALLAAGVPPHQALATNKLQSSFGSFT 60

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           A +                LG +N   +L+ +  +++      ++        L     +
Sbjct: 61  ATMNYA------------RLGLMNPRELLLGVLFTLIGAAAGARVVQRFPADRLESLIIV 108

Query: 270 IMFTTSFVFA 279
           ++       A
Sbjct: 109 MLIVIFIYTA 118


>gi|152983124|ref|YP_001354747.1| hypothetical protein mma_3057 [Janthinobacterium sp. Marseille]
 gi|151283201|gb|ABR91611.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 265

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 92/273 (33%), Gaps = 40/273 (14%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +V     G + GL G GGG++ VP+L  A  +   D      +++G S  V         
Sbjct: 5   LVLGATVGLVMGLTGAGGGILAVPLLVFALNMTVSDAGPIALLSVGISAAV-------GA 57

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           M   R G +  +          +   +   +   +D + L+  FA+  + +    L   R
Sbjct: 58  MIGFRAGAVRYRAAMVIAGTGILAAPIGLWLAQRLDTNLLSILFAVVLIWIAYKNLMDGR 117

Query: 147 LYCERKFPDNYVKYIWGMVTG-------FLSGALGVGG--------------GIFTNLLM 185
              ++    + +  I    +G         S  L  G                +    L 
Sbjct: 118 QKTQKAVNGDSLPCIRDEKSGRFVWTSKCASRLLLAGSFAGILSGLLGVGGGFVMVPALQ 177

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
            +   ++    ATS  V A I+   ++V I +G    G+             +     S 
Sbjct: 178 RYTDLAMKSVVATSLAVIAFISLTGVVVSISAGHFDQGVG------------VPFAAGSA 225

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L   +   LS  +  KYL I F++I    + + 
Sbjct: 226 LGMLIGQPLSLRLPAKYLKIAFAIICILVACLM 258



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++A   +G LSGL GVGGG VMVP L +          + M   + TSL VIA  S+  
Sbjct: 150 LLLAGSFAGILSGLLGVGGGFVMVPALQRY-------TDLAMKSVVATSLAVIAFISLTG 202

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +     G  +  +   +     +  ++   +   +   +L  AFAI C+L+  LM+ +
Sbjct: 203 VVVSISAGHFDQGVGVPFAAGSALGMLIGQPLSLRLPAKYLKIAFAIICILVACLMVGK 261


>gi|94497264|ref|ZP_01303836.1| hypothetical protein SKA58_13718 [Sphingomonas sp. SKA58]
 gi|94423369|gb|EAT08398.1| hypothetical protein SKA58_13718 [Sphingomonas sp. SKA58]
          Length = 259

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 97/261 (37%), Gaps = 24/261 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +  ++ A+ ++G +  + G GGGL+ +P L       GI        A+ T+      
Sbjct: 6   ETLAFLVAAALMAGCIDAMAG-GGGLITLPALM----AAGIPPVQ----AVATNKLQSCF 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  + + + R G +++K  K  +    I +V  + ++  VD S L        + M   
Sbjct: 57  GTFGACVAYARRGHMDLKTYKGPVMAAFIGSVAGAWLLQRVDPSILAGLMPALLIAMAAY 116

Query: 141 MLKRDRLYCERKFPDNYVKYIWG--MVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATA 197
                +L    +     +  + G   V GF  G  G G G F T + +   G SI +ATA
Sbjct: 117 FTFSPKLGDADRHARIGIAGLSGLIGVVGFYDGFFGPGAGAFYTTIFLALGGLSILRATA 176

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +   +       LL  +              G V   A L +   SI+   + + L+  
Sbjct: 177 QTKAANFASNIAGLLTMLAG------------GHVIWVAGLAMACGSIIGGQIGSHLAMR 224

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
            G + +     ++    +   
Sbjct: 225 FGSRLIKPLLILMSLALTAKM 245


>gi|302187746|ref|ZP_07264419.1| hypothetical protein Psyrps6_15424 [Pseudomonas syringae pv.
           syringae 642]
          Length = 259

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 96/264 (36%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 9   LTTLAILAVVAFIAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     +    +   + +++  ++   +LN+   +     G+
Sbjct: 60  FGSATASFTFYRRKLFDPRQWLHAVAGTAVGAALGAVIAHYLPAEWLNQMLPVIVFGCGL 119

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G+  GF  G  G G G F T   +L Y   + KA
Sbjct: 120 YLLFGGTPKAPLDSNAPIKRKWQLPQGLGLGFYDGVAGPGTGAFWTVSTLLLYPVDLVKA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V I+SG        + +G       L +    +L        +
Sbjct: 180 SGVARSMNFVSNAVALSVFIFSGQ-----VDYIIG-------LSMGLAVMLGAYFGAGTA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 IKGGAKFIRPVFITVVLGLTVRLA 251


>gi|240948000|ref|ZP_04752418.1| permease [Actinobacillus minor NM305]
 gi|240297670|gb|EER48144.1| permease [Actinobacillus minor NM305]
          Length = 266

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 93/264 (35%), Gaps = 10/264 (3%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +++    ++  +S LFG+GGG++MVP+L   F          + +   TSL  + 
Sbjct: 3   LTTLLILMCCGVVTNIMSALFGIGGGVLMVPILHTLF------PEFSLQMVAATSLTTVM 56

Query: 80  PTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            T+ ++ +   +   ++ +K L  W   +     +   +        +   F    L++ 
Sbjct: 57  GTACINLISFYKQKFSVQIKPLLLWSVGMIAGVQLGFELSFCFPNFLIITIFIGTLLVLA 116

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVT---GFLSGALGVGGGIFTNLLMLFYGASIYKA 195
                  +   +     N       +     G        GG I   LL L       K 
Sbjct: 117 WRSFLTKKGKNQIASTANEKLKGVAVCFLGGGIAGITGIGGGSIMAPLLSLLPSIKPAKI 176

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
              S  +  +     L   +           W +G+VN   V +++  S L + ++ KL 
Sbjct: 177 AVYSNYMMLIGGLGNLYGYLSKTPPFYLEEAWQIGYVNFSVVAVVVFCSFLTSFISIKLK 236

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
             + +  +  G  +I+   +   A
Sbjct: 237 GYLPEVLIQKGLGVILLIIAAYMA 260


>gi|171056880|ref|YP_001789229.1| hypothetical protein Lcho_0189 [Leptothrix cholodnii SP-6]
 gi|170774325|gb|ACB32464.1| protein of unknown function DUF81 [Leptothrix cholodnii SP-6]
          Length = 253

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 94/254 (37%), Gaps = 25/254 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+ +AS L+G +  + G GGGLV+VP L   F   G   +       GT+       +
Sbjct: 4   LLLVTLASGLAGFVDAIVG-GGGLVLVPALFTVFP--GAPPATL----FGTNKAASVWGT 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R   +N   L        +     + ++  V  + L +A     L + +  L
Sbjct: 57  AWAARLYARRVQMNWSTLGPAALAAFLGAAGGAWLVMQVPTTGLRRALPFILLAVLLYTL 116

Query: 143 KRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
            R  L            + ++    G V GF  G  G G G F   LM+ + G     A+
Sbjct: 117 ARKDLGRVHAPTLSRHAERWIGVAIGAVIGFYDGFFGPGTGSFFVFLMVRWLGYDFLHAS 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++      AL + + +            G V       +   ++L +   T+++ 
Sbjct: 177 AGAKLLNVATNVAALCLFVGT------------GHVMWLVAACMAAANVLGSYFGTRMAL 224

Query: 257 MIGKKYLTIGFSMI 270
             G  ++   F ++
Sbjct: 225 RRGAGFVRGVFIVV 238


>gi|49479826|ref|YP_035197.1| hypothetical protein BT9727_0854 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|228944668|ref|ZP_04107038.1| integral membrane protein [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|49331382|gb|AAT62028.1| conserved hypothetical protein, possible membrane protein [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|228815128|gb|EEM61379.1| integral membrane protein [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 255

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNY--VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +  +   +  V GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFVIGFYDGFLGPGTGSFLMFALLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNVGALLMFMYVG 201



 Score = 35.4 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|167628583|ref|YP_001679082.1| permease, putative [Heliobacterium modesticaldum Ice1]
 gi|167591323|gb|ABZ83071.1| permease, putative [Heliobacterium modesticaldum Ice1]
          Length = 121

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 8/116 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + V  F SG LSGL  VGGG ++VP L            +  H A   +L    P S
Sbjct: 3   MISLSVIGFFSGILSGL-AVGGGTLLVPALILVL-------DVPQHQAQALALTTFLPVS 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            ++   H ++G +  K+            +  +L+ +H+    L K F +F + MG
Sbjct: 55  AVALATHFKNGNVRPKLAFLLALGAISGAIGGALLAAHLPGPLLRKIFGLFLVAMG 110



 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 36/117 (30%), Gaps = 12/117 (10%)

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             + G  +G LSG    GG +    L+L      ++A A +      ++  AL     +G
Sbjct: 6   LSVIGFFSGILSGLAVGGGTLLVPALILVLDVPQHQAQALALTTFLPVSAVALATHFKNG 65

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                L              ++   +I        L+  +    L   F + +    
Sbjct: 66  NVRPKL------------AFLLALGAISGAIGGALLAAHLPGPLLRKIFGLFLVAMG 110


>gi|227540833|ref|ZP_03970882.1| protein of hypothetical function DUF81 [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227183365|gb|EEI64337.1| protein of hypothetical function DUF81 [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 298

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 71/238 (29%), Gaps = 16/238 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +  FL+  + G  G+G G     +L     L     S  +HVA          T+ 
Sbjct: 4   IIVAITGFLAQLVDGGLGMGFGATSTTLLITLAALTPAHASAVVHVAE-------LGTTA 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +S   H R G ++++          +   + +L+++ +    +         L  +    
Sbjct: 57  VSGFSHWRFGNVDLRQALWLGIPGGVGAFIGALLLTSITSPVVTAVILTGLGLNVMRRFA 116

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGV 202
           R                  G   G +    G G G + ++ ++  +     +   T    
Sbjct: 117 RRHQKPTAGTHSRSFLTGLGFFGGLIDATGGGGWGPVTSSTMLTLHKQDPRRIVGTVNTA 176

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
             L+   A    I   W                 +L +L    +  PLA  +      
Sbjct: 177 EFLVTASATAGFIVGLWEGLLAT--------WPLILALLIGGSIAAPLAAWIVSRFNP 226


>gi|91793782|ref|YP_563433.1| hypothetical protein Sden_2430 [Shewanella denitrificans OS217]
 gi|91715784|gb|ABE55710.1| protein of unknown function DUF81 [Shewanella denitrificans OS217]
          Length = 256

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 94/259 (36%), Gaps = 27/259 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +    +G +  + G GGGL+ +P L       G+      H+A+GT+       S 
Sbjct: 11  AMLALVGLFAGFIDAVVG-GGGLLSIPALLTI----GMPP----HIALGTNKLAACFGSF 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + +            +    I  ++ +L +  VD  +L K   I  + + +  L 
Sbjct: 62  TASLTYYKQQLFVPSFWYHSLGATFIGAIIGTLAVFLVDSQWLEKILPILIIGIALYTLV 121

Query: 144 RDRL----YCERKFPDNYV-KYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
             ++        K P +   ++  G+  G   G  G G G F  L  +  +   +  +  
Sbjct: 122 SPKVMDASQQAPKMPSSAAKQWTQGLGLGAYDGFAGPGIGAFWTLSSIKLHKLPLLNSCG 181

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  ++++    AL++              +LG V+    L I    ++   +    +  
Sbjct: 182 LARAMTSISNATALILFA------------ALGQVHWLLGLWIGICMMVGAYIGAHSAIR 229

Query: 258 IGKKYLTIGFSMIMFTTSF 276
            G  ++   F +++     
Sbjct: 230 FGVPFIKPLFIIMVLAMGA 248


>gi|187778556|ref|ZP_02995029.1| hypothetical protein CLOSPO_02151 [Clostridium sporogenes ATCC
           15579]
 gi|187772181|gb|EDU35983.1| hypothetical protein CLOSPO_02151 [Clostridium sporogenes ATCC
           15579]
          Length = 250

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 101/264 (38%), Gaps = 27/264 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L+  A FL+  +  + G GGGL+ +P     + + G+      H+A+GT+     
Sbjct: 1   MFTILLLCFAGFLAAIIDAIAG-GGGLITIPA----YLMAGVPP----HMALGTNKLCAT 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S+ S     + G IN+K+ K       I  ++    +  +D + LN    I  +++ +
Sbjct: 52  CSSLTSCFNFAQSGKINLKLFKILAPFSLIGAILGVNAVMGIDANCLNIIVLILLVIVAL 111

Query: 140 LMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIY 193
             L    +  +  F      +  +        GF +G  G G G      L+  +     
Sbjct: 112 FSLFSKNVGLKNNFHGLNKKNTLLGIFLSFSVGFYTGFFGPGTGAFMMIGLIGIFKFDFV 171

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +A+  S  ++ +    +L++  +               +N    + +    I+   L TK
Sbjct: 172 RASGNSKSLTTISNMASLILFAFHRQ------------INYKLAIPVSLAMIIGAKLGTK 219

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           ++   G K +   F+ I    +  
Sbjct: 220 IALNKGSKVIKPVFTTISLLIAIK 243



 Score = 35.4 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I  SF  G  +G FG G G  M+  L   F+   +        A G S  +   +++
Sbjct: 134 LLGIFLSFSVGFYTGFFGPGTGAFMMIGLIGIFKFDFVR-------ASGNSKSLTTISNM 186

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S +    H  IN K+       + I   + + +  +     +   F    LL+ I +L 
Sbjct: 187 ASLILFAFHRQINYKLAIPVSLAMIIGAKLGTKIALNKGSKVIKPVFTTISLLIAIKVLY 246

Query: 144 R 144
           +
Sbjct: 247 Q 247


>gi|39995378|ref|NP_951329.1| hypothetical protein GSU0268 [Geobacter sulfurreducens PCA]
 gi|39982140|gb|AAR33602.1| membrane protein, putative [Geobacter sulfurreducens PCA]
 gi|298504380|gb|ADI83103.1| membrane protein, putative [Geobacter sulfurreducens KN400]
          Length = 277

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 81/259 (31%), Gaps = 48/259 (18%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L+  F        I +  A+  S   I  TS  + + +      N+++         
Sbjct: 31  VPALTLLF-------GIPIRTAVAASTVSIIATSTGAAVAYLNDRLSNVRVAMWLEMGTA 83

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY-CERKFPDN----------- 156
              +  +L+  ++++  L   F +     G  M K  +        PD            
Sbjct: 84  TGALTGALVAGYLNQRVLFLMFGVLLAYSGYNMFKARKAELPGEVLPDKVSQRLGLAGSY 143

Query: 157 ------------YVKYIWGMVT----GFLSGALGVGGGIFTNLLM-LFYGASIYKATATS 199
                         + I G++     G  +G +G+G GIF    M          +TATS
Sbjct: 144 HDHVLNARVDYQVTRSILGLIIMYFSGAAAGLMGIGAGIFKVPAMDQVMRMPFKASTATS 203

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +  + A    +V                G VN      ++   +L   +  +L   + 
Sbjct: 204 NFMIGVTAASGAVVYFVR------------GDVNPLITGPVVLGVLLGALVGARLMVRMK 251

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              +   F  ++  T+ + 
Sbjct: 252 TTTIRKLFIPLIIYTAVMM 270



 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 54/128 (42%), Gaps = 7/128 (5%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  V    L ++  + SG  +GL G+G G+  VP + +  +       +    +  TS  
Sbjct: 153 DYQVTRSILGLIIMYFSGAAAGLMGIGAGIFKVPAMDQVMR-------MPFKASTATSNF 205

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           +I  T+    + +   G +N  I    +  + +  +V + ++  +  + + K F    + 
Sbjct: 206 MIGVTAASGAVVYFVRGDVNPLITGPVVLGVLLGALVGARLMVRMKTTTIRKLFIPLIIY 265

Query: 137 MGILMLKR 144
             ++M+ +
Sbjct: 266 TAVMMMYK 273


>gi|229055134|ref|ZP_04195562.1| integral membrane protein [Bacillus cereus AH603]
 gi|228721210|gb|EEL72739.1| integral membrane protein [Bacillus cereus AH603]
          Length = 256

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 77/206 (37%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLSPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G ++ +I+   I +  I  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAIYFIRSGKVDFRIVGKLIPLTIIGAVAGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKDWGSASTYKQMTKGKTLMFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|315452700|ref|YP_004072970.1| putative integral membrane protein [Helicobacter felis ATCC 49179]
 gi|315131752|emb|CBY82380.1| putative integral membrane protein [Helicobacter felis ATCC 49179]
          Length = 257

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 80/236 (33%), Gaps = 25/236 (10%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
            FG+GGG+V+VPV+                 A+G S+  +  +SV+    + + G ++++
Sbjct: 22  FFGIGGGMVIVPVMLVL--------GHSYDSAVGISILQMVFSSVVGSWTNFKKGFLDVR 73

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF----- 153
                     +    + L++      FL   F +  L   +    + +            
Sbjct: 74  TGIFVGLGGMVGASFSGLILRTFSHKFLLGVFILVTLYSFLRFAFKSKSPAVDSPQDFTL 133

Query: 154 --PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPA 210
                 +    G +TG  + +LG+GGG+    L+  +      ++           +   
Sbjct: 134 DTRTKLILVSIGALTGVFAISLGIGGGVLMVPLLAHYLKIPAKQSVPLGLFFVIFSSISG 193

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           +L        L  L     G       L++   S++   +  +L  ++   +    
Sbjct: 194 VLS--LERHDLLDLYDLQWG-------LMVGIGSVIGVVIGVRLMPLVPALWHRRA 240


>gi|212716541|ref|ZP_03324669.1| hypothetical protein BIFCAT_01468 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660528|gb|EEB21103.1| hypothetical protein BIFCAT_01468 [Bifidobacterium catenulatum DSM
           16992]
          Length = 103

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 8/79 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++++   + G LSG+FG+GGG V+VP L            +    A  TS+  I PTS
Sbjct: 1   MMVLVIVGMIVGLLSGMFGIGGGTVIVPALVWL--------GLSQRHAAATSMLAIVPTS 52

Query: 83  VMSFMEHRRHGTINMKILK 101
           +   + +  +G ++    +
Sbjct: 53  ISGVISYAHNGNVDWVAAR 71



 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 29/61 (47%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           V  I GM+ G LSG  G+GGG      +++ G S   A ATS       +   ++   ++
Sbjct: 3   VLVIVGMIVGLLSGMFGIGGGTVIVPALVWLGLSQRHAAATSMLAIVPTSISGVISYAHN 62

Query: 218 G 218
           G
Sbjct: 63  G 63


>gi|167624649|ref|YP_001674943.1| hypothetical protein Shal_2731 [Shewanella halifaxensis HAW-EB4]
 gi|167354671|gb|ABZ77284.1| protein of unknown function DUF81 [Shewanella halifaxensis HAW-EB4]
          Length = 257

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 95/260 (36%), Gaps = 28/260 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +  F++G +  + G GGGL+ +P L      MG+      H+A+GT+       S 
Sbjct: 11  AILALVGFIAGFIDAVSG-GGGLLSIPALLT----MGVSP----HMALGTNKLAACFGSS 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+   + +    +  +         I  V+ + ++  +D  +L K   I  + + +  L 
Sbjct: 62  MAAYTYYKQRLFSPSLWYHTFIATFIGAVIGTFIVYLIDNQWLEKWLPIMIIAIALYTLF 121

Query: 144 RDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
           +             K      +++ G+  GF  G  G G G F  +     +   +  + 
Sbjct: 122 QPNAMGDHNHKIPTKPKSKLRQWLQGLPLGFYDGFAGPGIGAFWTVSSTGLHKLPLLYSC 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++      +L++ +             LG V++   L +    +  + +    + 
Sbjct: 182 GLARAMTFTSNLTSLIIFLM------------LGKVHLVIGLSMGLCMMAGSYIGAHSAI 229

Query: 257 MIGKKYLTIGFSMIMFTTSF 276
             G  ++   F  ++   + 
Sbjct: 230 KFGLPFIRPIFITVILLIAA 249


>gi|18313308|ref|NP_559975.1| hypothetical protein PAE2388 [Pyrobaculum aerophilum str. IM2]
 gi|18160832|gb|AAL64157.1| hypothetical protein PAE2388 [Pyrobaculum aerophilum str. IM2]
          Length = 243

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 15/198 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              L ++A F+ G L  L GVGGG+++VP+L+           +    A   SL  I  T
Sbjct: 1   MFWLALLAGFIGGFLGPLIGVGGGVIIVPMLNL--------SGVAFQAAAAASLFSIVVT 52

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ S   +   G I+  +L  +        V+++ +      S++   + ++ + +GI++
Sbjct: 53  AITSIYNY--RGVIDFGLLAKYAAFSMAAAVLSAFISVKYSGSWVKLIYGVYLIAIGIVL 110

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSA 200
           L   R    R  P  ++ Y+   + GF+S   GVGGG      ++   G     A A S 
Sbjct: 111 LIDKRP--GRTMP--WLGYLLVFIGGFVSSLFGVGGGTIFVPALILLAGLDAKLAAAMSM 166

Query: 201 GVSALIAFPALLVRIYSG 218
           G+    A  +     + G
Sbjct: 167 GIIFPTALASTATYAWLG 184


>gi|325276579|ref|ZP_08142322.1| hypothetical protein G1E_23870 [Pseudomonas sp. TJI-51]
 gi|324098288|gb|EGB96391.1| hypothetical protein G1E_23870 [Pseudomonas sp. TJI-51]
          Length = 258

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 80/248 (32%), Gaps = 25/248 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
                +   +  +G    + G GGGL+ +P L  A    GID    M     T+    + 
Sbjct: 3   SIYIALAAVALFAGFFDAIAG-GGGLLTLPALFIA----GIDPLAAM----ATNKFQASS 53

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  +     R   I+ +       +  I  V  ++ IS +D+  L     I  + +   
Sbjct: 54  ASASAVWAFARKRMIDWRADWPMACLSFIGGVTGAMSISMLDRYVLESVVPIMLIAVAAY 113

Query: 141 MLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
                 L  +   ++              GF  G  G G G  F     L  G  + +A 
Sbjct: 114 FAFTPTLSSQERKQRLSSVAFTLAVVPAIGFYDGIFGPGTGSFFMVACTLLLGQPLMQAI 173

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S  ++A     AL V   S            G +     LI+   +I+   L  + + 
Sbjct: 174 CRSKLLNACCNLGALTVFACS------------GAIVWPLALIMAVSAIIGAQLGARCAL 221

Query: 257 MIGKKYLT 264
             G + + 
Sbjct: 222 HFGPRLVK 229


>gi|330821607|ref|YP_004350469.1| Predicted permease [Burkholderia gladioli BSR3]
 gi|327373602|gb|AEA64957.1| Predicted permease [Burkholderia gladioli BSR3]
          Length = 268

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 92/276 (33%), Gaps = 40/276 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++   L G + GL G GGG++ VP L              +  A   +L  +A ++
Sbjct: 1   MTIALILGALVGAVLGLTGAGGGILAVPALVAGLGW-------TIQQATPVALIAVAGSA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +E  R   +  +            T +       + +  L   FA+  L++   + 
Sbjct: 54  AIGALEAFRRRLVRYRAALLMAAAGVPATSLGVRAAQALPQRLLLALFAVVMLVVAARLW 113

Query: 143 KRDRLYCERKFPDNYVKYI---------------------WGMVTGFLSGALGVGGGIFT 181
           ++ R         + +                         G VTG ++G LGVGGG   
Sbjct: 114 RQVRAGRAEAVDHSPLCVGHMNPDTGRLAWTPATAAALAGTGAVTGLMTGLLGVGGGFII 173

Query: 182 NLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             ++       ++   ATS  V AL+    +   I  G  +            +   L  
Sbjct: 174 VPMLRKLTDVPMHGVVATSLMVIALVGTGGIASTIAHGTPVP-----------VEVALWF 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              +          S  +  +++  GF++++   + 
Sbjct: 223 SATTAAGMVAGRLASRRLAARHVQTGFAVVLTLVAA 258



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 8/114 (7%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G ++GL GVGGG ++VP+L K          + MH  + TSL VIA            
Sbjct: 157 VTGLMTGLLGVGGGFIIVPMLRKL-------TDVPMHGVVATSLMVIALVGTGGIASTIA 209

Query: 92  HGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           HGT + +++   +        V   L    +    +   FA+   L+   +L +
Sbjct: 210 HGTPVPVEVALWFSATTAAGMVAGRLASRRLAARHVQTGFAVVLTLVAAGLLAK 263



 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 46/122 (37%), Gaps = 15/122 (12%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI--AFPALLVRI 215
           +  I G + G + G  G GGGI     ++             AG+   I  A P  L+ +
Sbjct: 3   IALILGALVGAVLGLTGAGGGILAVPALV-------------AGLGWTIQQATPVALIAV 49

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                +  L  +    V   A L++    +  T L  + +  + ++ L   F+++M   +
Sbjct: 50  AGSAAIGALEAFRRRLVRYRAALLMAAAGVPATSLGVRAAQALPQRLLLALFAVVMLVVA 109

Query: 276 FV 277
             
Sbjct: 110 AR 111


>gi|254294281|ref|YP_003060304.1| hypothetical protein Hbal_1922 [Hirschia baltica ATCC 49814]
 gi|254042812|gb|ACT59607.1| protein of unknown function DUF81 [Hirschia baltica ATCC 49814]
          Length = 264

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 11/207 (5%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            + +   I L +++  + G   G FG GG ++  P+L      +GI+D    H+A+GTS 
Sbjct: 2   IELIPSIIVLTLLSGIIVGIFLGTFGGGGSVLAAPLLIYL---VGIEDP---HIAIGTSA 55

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
             +A  ++ S + H R G +       +     + +++ S +        L   F+    
Sbjct: 56  AGVAAIALFSLIGHWRGGRVKWPCAITFAVSGLLGSIIGSSLAKITQGDVLMIGFSGAMA 115

Query: 136 LMGILMLKRDRLYCERKFPDNYVKYI----WGMVTGFLSGALGVGGGIFTNL-LMLFYGA 190
           L+ + M K+ +   + +        +     GM+ G  +G  G+GGG      LML  G 
Sbjct: 116 LIALSMFKKPKSIGDPEVHLTPALTMRLAPIGMIVGVAAGFFGIGGGFLIVPGLMLAAGM 175

Query: 191 SIYKATATSAGVSALIAFPALLVRIYS 217
           ++  ATA+S    A+           S
Sbjct: 176 TMANATASSLVSVAIFGAATSANYAIS 202



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 14/123 (11%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG--ASIYKATATSAGVSALIAFPALLVRI 215
           +  + G++ G   G  G GG +    L+++       + A  TSA   A IA  +L+   
Sbjct: 11  LTLLSGIIVGIFLGTFGGGGSVLAAPLLIYLVGIEDPHIAIGTSAAGVAAIALFSLIG-- 68

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                      W  G V     +      +L + + + L+ +     L IGFS  M   +
Sbjct: 69  ----------HWRGGRVKWPCAITFAVSGLLGSIIGSSLAKITQGDVLMIGFSGAMALIA 118

Query: 276 FVF 278
              
Sbjct: 119 LSM 121


>gi|319775932|ref|YP_004138420.1| inner membrane protein [Haemophilus influenzae F3047]
 gi|329123793|ref|ZP_08252351.1| inner membrane protein YfcA [Haemophilus aegyptius ATCC 11116]
 gi|317450523|emb|CBY86740.1| conserved inner membrane protein [Haemophilus influenzae F3047]
 gi|327469280|gb|EGF14751.1| inner membrane protein YfcA [Haemophilus aegyptius ATCC 11116]
          Length = 255

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 100/239 (41%), Gaps = 25/239 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + ++    F++  +  + G GGGL+ +P L     + G+  +    +A+GT+     
Sbjct: 5   IDLLAILFCVGFVASFIDAIAG-GGGLITIPALL----MTGMPPA----MALGTNKLQAM 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ + +   R   +N++ +   +  + + + + +L+I  +D +   K      L +G+
Sbjct: 56  GGALSASLYFLRKRAVNLRDIWFILIWVFLGSALGTLLIQSIDVAIFKKMLPFLILAIGL 115

Query: 140 LMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
             L   +L  E   ++        +     GF  G  G G G I +   +   G ++ KA
Sbjct: 116 YFLFTPKLGDEDRKQRLSYMLFGLLVSPFLGFYDGFFGPGTGSIMSLACVTLLGFNLPKA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           TA +  ++      +  + +  G  L     W +GFV       ++  SIL   L  K+
Sbjct: 176 TAHAKVMNFTSNLASFALFLLGGQIL-----WKVGFV-------MMAGSILGANLGAKM 222


>gi|229010349|ref|ZP_04167556.1| integral membrane protein [Bacillus mycoides DSM 2048]
 gi|228750921|gb|EEM00740.1| integral membrane protein [Bacillus mycoides DSM 2048]
          Length = 263

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 76/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++I   FL+  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 16  SVLIILIAFGFLAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 66

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I    + I 
Sbjct: 67  GSATSNIVFYRSGNLDLKSAFKLFPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 126

Query: 141 MLKRDRL---YCERKFPDNYVK--YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V     +    GF  G LG G G F    +LF G    KA
Sbjct: 127 TIFKKDWGSISTHKKLSGRHVIIFTFFVFAIGFYDGFLGPGTGSFLMFALLFIGYDFLKA 186

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 187 AGNAKLLNLGSNVGALLIFMYVG 209


>gi|222149103|ref|YP_002550060.1| hypothetical protein Avi_2848 [Agrobacterium vitis S4]
 gi|221736088|gb|ACM37051.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 244

 Score = 64.7 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 90/224 (40%), Gaps = 13/224 (5%)

Query: 54  KAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV 113
            A  L+ +  +    +A GT+L ++    + + +++R  G+ ++K          +T+ +
Sbjct: 28  FAIPLLVLFAAYDQKLAQGTALVMVVTNVLYALVKYRNKGSFDLKTALVLAASGSVTSAI 87

Query: 114 TSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGAL 173
           +SL    +    L   + +F +L+   +     +       D    ++ G + G   G  
Sbjct: 88  SSLWALSLSSETLKLWYGVFLMLLAAFVAITRNIKFVSHGLDYRWAFLPGAIGGISLGLF 147

Query: 174 GVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           GVGG +    L++ FYG S  +A      +   +A P         +G  G   W+LG  
Sbjct: 148 GVGGAMLAVPLLVMFYGHSQVRAQG----LGLALALPG-CSISLMQYGYYGHVDWTLG-- 200

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                L++    +L  P    L++ + ++ L + F  ++     
Sbjct: 201 -----LMLAIGGLLGVPAGVHLAHKVDERTLVLSFCTLLIAAGL 239



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 7/115 (6%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             + G   GLFGVGG ++ VP+L   +    +        A G  L +  P   +S M++
Sbjct: 137 GAIGGISLGLFGVGGAMLAVPLLVMFYGHSQVR-------AQGLGLALALPGCSISLMQY 189

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +G ++  +         +       +   VD+  L  +F    +  G+L++ +
Sbjct: 190 GYYGHVDWTLGLMLAIGGLLGVPAGVHLAHKVDERTLVLSFCTLLIAAGLLVIVK 244


>gi|27379143|ref|NP_770672.1| hypothetical protein bll4032 [Bradyrhizobium japonicum USDA 110]
 gi|27352293|dbj|BAC49297.1| bll4032 [Bradyrhizobium japonicum USDA 110]
          Length = 260

 Score = 64.7 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 55/271 (20%), Positives = 91/271 (33%), Gaps = 38/271 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGV--GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV-IA 79
           +   I    + G  SG  G   GGGLV+  VL               HVA GTSL   + 
Sbjct: 7   LLAGIGVGLVGGATSGFMGTSPGGGLVIFSVLLL---------GAEQHVAQGTSLITQVP 57

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH----VDKSFLNKAFAIFCL 135
           PT       + + G    +    WI  + I  +V      +    V  + L   + ++  
Sbjct: 58  PTGFAGVRRYWQSGN---RSPLQWIVWIGIGFLVGGAGGGYAAAGVSDAVLQWTYVVYLA 114

Query: 136 LMGILMLKRDRLYCERKFPDNYV------KYIWGMVTGFLSGALGVGGG-IFTNLLMLFY 188
           L+   +L R           +         ++ G + GF SG +G+GGG   T  L    
Sbjct: 115 LLIAALLLRRDRKDGAGEAGDPAELPWLPLFLIGALAGFSSGFMGIGGGLAITVGLAAGL 174

Query: 189 GASIYKATATSAGVSA-LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
               ++A   S   S      PA  +    G             V   A++ I+    + 
Sbjct: 175 RVPQHQAQLVSLVFSVIPTNIPAAWIYWSKGLM-----------VGWPAIIGIVAGLWVG 223

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           T L  +++  + K  L      ++   +   
Sbjct: 224 TDLGARMANGVSKSVLRRVMIALVSLMALYM 254



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 9/121 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPTSVM 84
           + +   L+G  SG  G+GGGL +   L+   +       +  H A   SL   + PT++ 
Sbjct: 144 LFLIGALAGFSSGFMGIGGGLAITVGLAAGLR-------VPQHQAQLVSLVFSVIPTNIP 196

Query: 85  SFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +   +   G  +    +   +  L + T + + M + V KS L +       LM + M  
Sbjct: 197 AAWIYWSKGLMVGWPAIIGIVAGLWVGTDLGARMANGVSKSVLRRVMIALVSLMALYMTY 256

Query: 144 R 144
           +
Sbjct: 257 K 257


>gi|314936186|ref|ZP_07843533.1| putative membrane protein [Staphylococcus hominis subsp. hominis
           C80]
 gi|313654805|gb|EFS18550.1| putative membrane protein [Staphylococcus hominis subsp. hominis
           C80]
          Length = 261

 Score = 64.7 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 86/233 (36%), Gaps = 25/233 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +P L       G+  S    +A+GT+    A  S+ S ++  + G ++ KI   
Sbjct: 30  GGGLISIPALLAI----GMPPS----LALGTNKLASAFGSLTSAIKFLKSGNVDKKIAFR 81

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW 162
               + I  V  + + + +    L     +    + I  + +      R F    +    
Sbjct: 82  LFPFVFIFAVGGASLATFLPSEVLKPLVIVILTFVLIYTIFKKEWGNVRTFSKFTITKAI 141

Query: 163 GMV-----TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
             +      GF  G LG G G F   ++L +G     A   +  ++      AL + I  
Sbjct: 142 AFISLLLLIGFYDGFLGGGTGSFMLFVLLMFGFDFLSAAGNAKVLNFASNVGALTLFII- 200

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
                      LG VNI   LI+    ++ +      +   G  Y+ I F ++
Sbjct: 201 -----------LGQVNITYGLIMAVSMVIGSYTGAHFAIKKGVGYVKIVFIIV 242


>gi|25029194|ref|NP_739248.1| hypothetical protein CE2638 [Corynebacterium efficiens YS-314]
 gi|259505809|ref|ZP_05748711.1| conserved membrane protein YtnM [Corynebacterium efficiens YS-314]
 gi|23494482|dbj|BAC19448.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259166597|gb|EEW51151.1| conserved membrane protein YtnM [Corynebacterium efficiens YS-314]
          Length = 323

 Score = 64.7 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 72/207 (34%), Gaps = 13/207 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + LI +A   +  + G  G+G G+    +L     L     S  +H A         
Sbjct: 1   MQTLILIAIAGLAAQLVDGGLGMGFGVTSTTILIMLAGLGPAQASAVVHTAE-------V 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+++S + H + G ++ K++        I     +  +S++         +    L+G+
Sbjct: 54  GTTLVSGISHWKFGNVDWKVVLRLGVPGAIGAFAGATFLSNLSMEAAAPVTSAILALIGM 113

Query: 140 LM-LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG-----IFTNLLMLFYGASIY 193
            +  +  +    R F        +    G + G +   GG     + T+ LM        
Sbjct: 114 NLVWRFSKGRVRRTFSQRPHSAGFLGGLGIVGGFVDASGGGGWGPVTTSTLMTLGRTEPR 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWG 220
           K   T      L++  A L  I   W 
Sbjct: 174 KIVGTVNTAEFLVSVAATLGFIIGLWS 200


>gi|226950296|ref|YP_002805387.1| hypothetical protein CLM_3258 [Clostridium botulinum A2 str. Kyoto]
 gi|226841822|gb|ACO84488.1| putative membrane protein [Clostridium botulinum A2 str. Kyoto]
          Length = 250

 Score = 64.7 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 99/264 (37%), Gaps = 27/264 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L+  A FL+  +  + G GGGL+ +P     + + G+      H+A+GT+     
Sbjct: 1   MFTILLLCFAGFLAAIIDAIAG-GGGLITIPA----YLMAGVPP----HMALGTNKLCAT 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S+ S     + G IN+K+ K       I  ++    +  +D + LN    I  + + +
Sbjct: 52  CSSLTSCFNFAQSGKINLKLFKILAPFSLIGAILGVNAVMGIDANCLNIIVLILLVTVAL 111

Query: 140 LMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIY 193
             L    +  +  F      +  +        GF +G  G G G      L+  +     
Sbjct: 112 FSLFSKNVGLKNNFHGLNKKNTLLGIFLSFSVGFYTGFFGPGTGAFMMIGLIGIFKFDFV 171

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+  S  ++ +    +L++  +               +N    + +    I+   L TK
Sbjct: 172 GASGNSKSLTTISNMASLILFAFHRQ------------INYKLAIPVSLAMIIGAKLGTK 219

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           ++   G K +   F+ I    +  
Sbjct: 220 IALNKGSKVIKPVFTTISILIAIK 243


>gi|119471108|ref|ZP_01613640.1| hypothetical protein ATW7_09031 [Alteromonadales bacterium TW-7]
 gi|119445764|gb|EAW27046.1| hypothetical protein ATW7_09031 [Alteromonadales bacterium TW-7]
          Length = 258

 Score = 64.7 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 97/261 (37%), Gaps = 28/261 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++   +  +G +  + G GGG++ VP L  A         +  H+ +GT+    +  S+
Sbjct: 12  AILCAVALAAGFIDAIAG-GGGMLTVPALLTA--------GLPPHLTLGTNKLAASFGSL 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   + +    + K     I    I  ++ ++++ ++   FLNK   I  +++    L 
Sbjct: 63  TASFTYYKKNLFSPKFWLASIIATAIGALLGTVIVDYLSIDFLNKLLPIIIIVVACYSLF 122

Query: 144 -RDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKAT 196
                    + P         +++ G+  GF  G  G G G F      + Y  ++    
Sbjct: 123 GNLSTTQGDELPKLNNAMKVKQWVQGLALGFFDGLAGPGTGTFWTASNGMLYKMNLLLNC 182

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++ +  F +L+  +            +LG VN    + +    +L        + 
Sbjct: 183 GLARSMNFVSNFISLITFV------------ALGHVNFLLGITMGFFIMLGAWFGAHSAI 230

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G K++   F+ ++   +  
Sbjct: 231 KFGSKFIRPVFNTMVILLALK 251


>gi|257093557|ref|YP_003167198.1| hypothetical protein CAP2UW1_1973 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046081|gb|ACV35269.1| protein of unknown function DUF81 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 258

 Score = 64.7 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 91/269 (33%), Gaps = 36/269 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  ++ F+ G + GL GVGGG +M P+L   F        +    A+GT L   A T  
Sbjct: 3   WMYTLSGFVVGAIVGLTGVGGGSLMTPLLVLLF-------GVHPATAVGTDLLYAAITKA 55

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIFCLLM 137
              + H + G ++ ++ +           +T   +S +          ++ +  I  LL 
Sbjct: 56  GGTVVHAKKGHVDWQVTRLLATGSIPAAALTVWALSFLPKRSPEVSQVISFSLGIALLLT 115

Query: 138 GILMLKRDRLYCE---------RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
              ++ R +L  +                +    G + G L     VG G     ++ + 
Sbjct: 116 AAAIIFRQKLQQQALAHADDAAHTQLRAPITVAVGALLGVLVSVSSVGAGALGVAVLFYL 175

Query: 189 --GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
                  +   +    +  +              + GL  W +G V+   +  +L  S+ 
Sbjct: 176 YPRLPAIRIIGSDVAHAVPLTL------------VAGLGHWLIGSVDWSLLGSLLLGSLP 223

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
              L +  S  +  + L    + ++    
Sbjct: 224 GIWLGSHASAKVPDRCLRPILAGMLVLIG 252


>gi|30261068|ref|NP_843445.1| hypothetical protein BA_0939 [Bacillus anthracis str. Ames]
 gi|47526225|ref|YP_017574.1| hypothetical protein GBAA_0939 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49183909|ref|YP_027161.1| hypothetical protein BAS0886 [Bacillus anthracis str. Sterne]
 gi|165871672|ref|ZP_02216317.1| putative membrane protein [Bacillus anthracis str. A0488]
 gi|167635466|ref|ZP_02393779.1| putative membrane protein [Bacillus anthracis str. A0442]
 gi|167638974|ref|ZP_02397248.1| putative membrane protein [Bacillus anthracis str. A0193]
 gi|170687642|ref|ZP_02878858.1| putative membrane protein [Bacillus anthracis str. A0465]
 gi|170707952|ref|ZP_02898401.1| putative membrane protein [Bacillus anthracis str. A0389]
 gi|177653524|ref|ZP_02935698.1| putative membrane protein [Bacillus anthracis str. A0174]
 gi|190566574|ref|ZP_03019491.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I]
 gi|227816200|ref|YP_002816209.1| hypothetical protein BAMEG_3627 [Bacillus anthracis str. CDC 684]
 gi|229601566|ref|YP_002865501.1| hypothetical protein BAA_1040 [Bacillus anthracis str. A0248]
 gi|254682873|ref|ZP_05146734.1| hypothetical protein BantC_03345 [Bacillus anthracis str.
           CNEVA-9066]
 gi|254725660|ref|ZP_05187442.1| hypothetical protein BantA1_24911 [Bacillus anthracis str. A1055]
 gi|254734286|ref|ZP_05191999.1| hypothetical protein BantWNA_03848 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254740066|ref|ZP_05197758.1| hypothetical protein BantKB_03424 [Bacillus anthracis str. Kruger
           B]
 gi|254753405|ref|ZP_05205441.1| hypothetical protein BantV_13088 [Bacillus anthracis str. Vollum]
 gi|254758504|ref|ZP_05210531.1| hypothetical protein BantA9_09344 [Bacillus anthracis str.
           Australia 94]
 gi|30254682|gb|AAP24931.1| putative membrane protein [Bacillus anthracis str. Ames]
 gi|47501373|gb|AAT30049.1| putative membrane protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177836|gb|AAT53212.1| membrane protein, putative [Bacillus anthracis str. Sterne]
 gi|164712573|gb|EDR18105.1| putative membrane protein [Bacillus anthracis str. A0488]
 gi|167513104|gb|EDR88476.1| putative membrane protein [Bacillus anthracis str. A0193]
 gi|167529084|gb|EDR91838.1| putative membrane protein [Bacillus anthracis str. A0442]
 gi|170127112|gb|EDS95990.1| putative membrane protein [Bacillus anthracis str. A0389]
 gi|170668455|gb|EDT19202.1| putative membrane protein [Bacillus anthracis str. A0465]
 gi|172081328|gb|EDT66402.1| putative membrane protein [Bacillus anthracis str. A0174]
 gi|190562126|gb|EDV16094.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I]
 gi|227004231|gb|ACP13974.1| putative membrane protein [Bacillus anthracis str. CDC 684]
 gi|229265974|gb|ACQ47611.1| putative membrane protein [Bacillus anthracis str. A0248]
          Length = 255

 Score = 64.7 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVIAIY 118

Query: 141 MLKRDRL---YCERKFPDNY--VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +  +   +  V GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFAFFIFVIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNVGALLMFMYVG 201


>gi|34557943|ref|NP_907758.1| integral membrane protein- permeases [Wolinella succinogenes DSM
           1740]
 gi|34483661|emb|CAE10658.1| INTEGRAL MEMBRANE PROTEIN-Predicted permeases [Wolinella
           succinogenes]
          Length = 234

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 72/215 (33%), Gaps = 14/215 (6%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +  A+G S+  +  +S+     + +   +++K          +  + +  ++ +V   FL
Sbjct: 24  IKTAVGISIMQMTFSSLFGSYVNFKKSNLDLKDGLYVGIGGFLGAMWSGTVVDNVPSKFL 83

Query: 127 NKAFAIFCLLMGILMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
             AF    +       +             P  ++    G  TG  + +LG+GGG+    
Sbjct: 84  EIAFFFIVIYSIYRFSRNPAAGTNDPNHPTPSRWLLIAIGAFTGVFAISLGIGGGMMLAP 143

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           L+ +Y          S+     IA   ++    SG+          G+V+    LI+   
Sbjct: 144 LLGYY-------LGYSSKKVIPIALFFVIFSSVSGFASLAYH----GYVDYEHGLIVGLA 192

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           S+        L   I  K       ++      V 
Sbjct: 193 SLFGVQTGIYLLQKIDAKRHKYALLLMYIVVLLVM 227



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 48/121 (39%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+I     +G  +   G+GGG+++ P+L      +G      + +A    L  +  +SV
Sbjct: 117 WLLIAIGAFTGVFAISLGIGGGMMLAPLLGY---YLGYSSKKVIPIA----LFFVIFSSV 169

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
             F     HG ++ +                  ++  +D      A  +  +++ ++MLK
Sbjct: 170 SGFASLAYHGYVDYEHGLIVGLASLFGVQTGIYLLQKIDAKRHKYALLLMYIVVLLVMLK 229

Query: 144 R 144
           +
Sbjct: 230 K 230


>gi|217958535|ref|YP_002337083.1| hypothetical protein BCAH187_A1113 [Bacillus cereus AH187]
 gi|229137750|ref|ZP_04266353.1| integral membrane protein [Bacillus cereus BDRD-ST26]
 gi|217064545|gb|ACJ78795.1| putative membrane protein [Bacillus cereus AH187]
 gi|228645725|gb|EEL01956.1| integral membrane protein [Bacillus cereus BDRD-ST26]
          Length = 255

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSALRLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNY--VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +  +   +  V GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFVIGFYDGFLGPGTGSFLMFALLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      AL + +Y G
Sbjct: 179 AGTAKFLNLGSNVGALFMFMYVG 201



 Score = 35.8 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 51/120 (42%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ + L + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSALRLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118


>gi|332186720|ref|ZP_08388463.1| hypothetical protein SUS17_1721 [Sphingomonas sp. S17]
 gi|332013372|gb|EGI55434.1| hypothetical protein SUS17_1721 [Sphingomonas sp. S17]
          Length = 260

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 96/262 (36%), Gaps = 25/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L   +  L G   GL G GG ++ VP++      +G+  +   HVA+GTS   +A  + 
Sbjct: 9   LLGGFSGGLVGFTLGLVGGGGSILAVPLMVYL---VGVPSA---HVAIGTSALAVAVNAA 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + H R GT+  +    +           S      D + L   FA+  + +GI+ML+
Sbjct: 63  TGLIGHARAGTVKWRCGGMYAAAGIAGAFAGSTAGKAFDGTHLLFLFALVMVAVGIVMLR 122

Query: 144 RDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
             +       +    +      +G+VTG  SG  G+GGG      ++      +  A  T
Sbjct: 123 GRKAEGVPGAQCNRENAPKVLGFGLVTGIFSGFFGIGGGFLIVPGLIGATRMPMLNAVGT 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S    A           +SG             V+     + +   I    +    +  +
Sbjct: 183 SLVAVAAFGLTTAFNYAWSGM------------VDWPLAGVFIAGGIAGGLVGLAAARRL 230

Query: 259 GKKY--LTIGFSMIMFTTSFVF 278
            +    LT  F++++F  +   
Sbjct: 231 SESRGALTTVFAILIFVVAAYM 252



 Score = 37.4 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 2/83 (2%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           + M  A+GTSL  +A   + +   +   G ++  +   +I       +V       + +S
Sbjct: 174 MPMLNAVGTSLVAVAAFGLTTAFNYAWSGMVDWPLAGVFIAGGIAGGLVGLAAARRLSES 233

Query: 125 --FLNKAFAIFCLLMGILMLKRD 145
              L   FAI   ++   ML R 
Sbjct: 234 RGALTTVFAILIFVVAAYMLWRS 256


>gi|315127106|ref|YP_004069109.1| hypothetical protein PSM_A2037 [Pseudoalteromonas sp. SM9913]
 gi|315015620|gb|ADT68958.1| hypothetical protein PSM_A2037 [Pseudoalteromonas sp. SM9913]
          Length = 258

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 98/261 (37%), Gaps = 28/261 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++   + L+G +  + G GGGL+ VP L  A         +  H+ +GT+    +  S+
Sbjct: 12  AILCGVALLAGFIDAIAG-GGGLLTVPALLTA--------GLPPHLTLGTNKLAASFGSL 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + +    N +     I    I  ++ ++++ H+   FLNK   I  +L+    L 
Sbjct: 63  TASITYYKKQLFNPRFWFASIMATAIGALLGTIIVDHLSIEFLNKLLPIIIILVACYSLF 122

Query: 144 -RDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKAT 196
                      P         +++ G+  GF  G  G G G F      + Y  S+    
Sbjct: 123 GNLSTTQSDDLPKLTRTIKVKQWLQGLSLGFFDGLAGPGTGTFWTASNGMLYKMSLLLNC 182

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++ +  F +L+  +            +LG VN    + +    +L        + 
Sbjct: 183 GLARSMNFVSNFISLITFV------------ALGHVNFLLGITMGFFIMLGAWFGAHSAI 230

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G K++   F+ ++   +  
Sbjct: 231 RFGSKFIRPVFNTMVILLALK 251


>gi|229195256|ref|ZP_04322029.1| integral membrane protein [Bacillus cereus m1293]
 gi|228588201|gb|EEK46246.1| integral membrane protein [Bacillus cereus m1293]
          Length = 255

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSALRLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNY--VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +  +   +  V GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFVIGFYDGFLGPGTGSFLMFALLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      AL + +Y G
Sbjct: 179 AGTAKFLNLGSNVGALFMFMYVG 201



 Score = 35.8 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 51/120 (42%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ + L + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSALRLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118


>gi|163938299|ref|YP_001643183.1| hypothetical protein BcerKBAB4_0289 [Bacillus weihenstephanensis
           KBAB4]
 gi|229009791|ref|ZP_04167011.1| integral membrane protein [Bacillus mycoides DSM 2048]
 gi|229131296|ref|ZP_04260198.1| integral membrane protein [Bacillus cereus BDRD-ST196]
 gi|163860496|gb|ABY41555.1| protein of unknown function DUF81 [Bacillus weihenstephanensis
           KBAB4]
 gi|228652182|gb|EEL08117.1| integral membrane protein [Bacillus cereus BDRD-ST196]
 gi|228751409|gb|EEM01215.1| integral membrane protein [Bacillus mycoides DSM 2048]
          Length = 256

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 79/206 (38%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           ++     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   EELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLSPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 ++ S +   R G +N +I+   I +  I  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTLTSTIYFIRSGKVNFRIVGKLIPLTIIGAVAGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIAKKDWGSASTYKKMTKGKTLMFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|226942144|ref|YP_002797218.1| transmembrane protein [Laribacter hongkongensis HLHK9]
 gi|226717071|gb|ACO76209.1| probable transmembrane protein [Laribacter hongkongensis HLHK9]
          Length = 310

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 13/206 (6%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +++ +  +   +F++G +    G GGGL+ +P L  A         +      GT+    
Sbjct: 1   MIEELLFLGAMAFVAGLIDSAVG-GGGLIQIPALFNAL------PEVNTATLFGTNKFSS 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              +  +     R   +   ++        + +   +  +S + K  +  A  +  + M 
Sbjct: 54  IFGTASAARSFMRRVRLPWALILPAAGCAFVFSFAGAAAVSLIPKEVMKPAVLVLLVGMA 113

Query: 139 ILMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
           I  L +       K       + ++  + G   GF  G  G G G     L + F+    
Sbjct: 114 IYTLWKKDFGKLHKPAVIGQRERWLAALIGGAIGFYDGIFGPGTGSFLIFLFIRFFAFDF 173

Query: 193 YKATATSAGVSALIAFPALLVRIYSG 218
             A+A++  V+      AL+  + +G
Sbjct: 174 LHASASAKFVNFATNLAALVFFVPAG 199


>gi|218134578|ref|ZP_03463382.1| hypothetical protein BACPEC_02481 [Bacteroides pectinophilus ATCC
           43243]
 gi|217989963|gb|EEC55974.1| hypothetical protein BACPEC_02481 [Bacteroides pectinophilus ATCC
           43243]
          Length = 255

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 103/262 (39%), Gaps = 25/262 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +   A   +G  +G  G+    V+ P+L      +G+D     ++A+G +L      S
Sbjct: 8   VIVTFFAGMGAGLGTGFAGMSAAAVISPILI---TFLGMDP----YIAVGIALSSDVLAS 60

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +S   + ++  ++++     +  +   TVV S + S V  + +        LL+GI  +
Sbjct: 61  AVSAYTYGKNKNLDIRNGLIMMVTVLAFTVVGSYISSLVPSAAMGNFSVFMTLLLGIKFI 120

Query: 143 KRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKA 195
            R  +  +        K       I GM+ GF+ G +G GGG+   L++    G  +  A
Sbjct: 121 VRPVMTTKEAMQGVSAKKRAIQSVICGMIIGFICGFVGAGGGMMMLLILTSVLGYELKTA 180

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TS  + A  AF   +     G    G+P  ++        L+ +  +++   +A   +
Sbjct: 181 VGTSVFIMAFTAFTGAVSHFAIG----GMPDITV-------CLLCIVFTLIWARIAAVFA 229

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
                  L     +I+     V
Sbjct: 230 NKATPATLNRATGIILVILGIV 251


>gi|332186970|ref|ZP_08388711.1| hypothetical protein SUS17_2059 [Sphingomonas sp. S17]
 gi|332012980|gb|EGI55044.1| hypothetical protein SUS17_2059 [Sphingomonas sp. S17]
          Length = 304

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 53/291 (18%), Positives = 101/291 (34%), Gaps = 56/291 (19%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +II      G LSG+FGVGGG +  P+L     + GI  ++    A       +   SV
Sbjct: 15  LVIIALGAGVGLLSGMFGVGGGFLTTPLLI----VYGIPPTVAAASAA----SQVTGASV 66

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFCLLMG 138
                H + G +++K+    +    + + + + +   +  S      +   + +    +G
Sbjct: 67  SGVFAHWQRGGVDVKMGGVLVAGGIVGSFIGAWIFRLLQASGQIDTVIAIIYVLMLGWIG 126

Query: 139 ILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVTG 167
           ++M                                 R R Y    +       + GM TG
Sbjct: 127 LVMAREALAAIIAARRGVAQRAARRRHHPVVAALPFRTRFYASGIYISPLAPLLLGMFTG 186

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
            L+  LG+GGG      M++  G +      TS   +  +   A +V   +         
Sbjct: 187 ILTILLGIGGGFVLVPAMIYILGMATRVVLGTSLFQTLFVTAAATMVHATTTKA------ 240

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                V+I    ++L  S+    L  K +  +  +YL +  ++I+      
Sbjct: 241 -----VDIVLAGLLLIGSVTGAQLGAKFATNVKPEYLRLALAVIVLLVGLR 286



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++    +G L+ L G+GGG V+VP +            +   V +GTSL      +  + 
Sbjct: 179 LLLGMFTGILTILLGIGGGFVLVPAMIYIL-------GMATRVVLGTSLFQTLFVTAAAT 231

Query: 87  MEHR-RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H      +++ +    +        + +   ++V   +L  A A+  LL+G+ +L   
Sbjct: 232 MVHATTTKAVDIVLAGLLLIGSVTGAQLGAKFATNVKPEYLRLALAVIVLLVGLRILLGL 291

Query: 146 RLYCER 151
               E 
Sbjct: 292 VWRPEE 297


>gi|148825537|ref|YP_001290290.1| hypothetical protein CGSHiEE_02260 [Haemophilus influenzae PittEE]
 gi|229847373|ref|ZP_04467474.1| hypothetical protein CGSHi7P49H1_00745 [Haemophilus influenzae
           7P49H1]
 gi|148715697|gb|ABQ97907.1| hypothetical protein CGSHiEE_02260 [Haemophilus influenzae PittEE]
 gi|229809699|gb|EEP45424.1| hypothetical protein CGSHi7P49H1_00745 [Haemophilus influenzae
           7P49H1]
 gi|309972680|gb|ADO95881.1| Putative permease YcfA [Haemophilus influenzae R2846]
          Length = 255

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 100/239 (41%), Gaps = 25/239 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + ++    F++  +  + G GGGL+ +P L     + G+  +    +A+GT+     
Sbjct: 5   IDLLAILFCVGFVASFIDAIAG-GGGLITIPALL----MTGMPPA----MALGTNKLQAM 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ + +   R   +N++ +   +  + + + + +L+I  +D +   K      L +G+
Sbjct: 56  GGALSASLYFLRKRAVNLRDIWFILIWVFLGSALGTLLIQSIDMAIFKKILPFLILAIGL 115

Query: 140 LMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
             L   +L     +++        +     GF  G  G G G I +   +   G ++ KA
Sbjct: 116 YFLFTPKLGDKDRKQRLSYMLFGLLVSPFLGFYDGFFGPGTGSIMSLACVTLLGFNLPKA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           TA +  ++      +  + +  G  L     W +GFV       ++  SIL   L  K+
Sbjct: 176 TAHAKVMNFTSNLASFALFLLGGQIL-----WKVGFV-------MMAGSILGANLGAKM 222


>gi|299533745|ref|ZP_07047117.1| hypothetical protein CTS44_23136 [Comamonas testosteroni S44]
 gi|298718294|gb|EFI59279.1| hypothetical protein CTS44_23136 [Comamonas testosteroni S44]
          Length = 252

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 92/250 (36%), Gaps = 25/250 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ +AS L+G +  + G GGGL++VP +  AF       +       GT+       + 
Sbjct: 4   ILVSLASALAGFVDAIVG-GGGLILVPAMFAAF------PTTTPATLFGTNKSAAVWGTA 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +S  ++ +   I    L   I    +   + +  ++ +   FL K      L +    L 
Sbjct: 57  ISAWQYSKRVHITWATLVPAIGTTLVGAFLGAWAVTLISPDFLRKLLPFILLGVLGYTLA 116

Query: 144 RDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATA 197
           +  L  + +       +       G++ GF  G  G G G F   L +   G     A+A
Sbjct: 117 KKELGRDHEPRLAGRTEMLTASAIGLLIGFYDGFFGPGTGSFFVFLFVRLLGYDFLNASA 176

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           ++  ++      ALL+                G V     + +   ++L + L T ++  
Sbjct: 177 SAKLLNLASNAAALLLFTLK------------GHVWWHFAIPLAVANVLGSMLGTWMALR 224

Query: 258 IGKKYLTIGF 267
            G  ++   F
Sbjct: 225 HGTGFVRTIF 234


>gi|269797489|ref|YP_003311389.1| hypothetical protein Vpar_0425 [Veillonella parvula DSM 2008]
 gi|269094118|gb|ACZ24109.1| protein of unknown function DUF81 [Veillonella parvula DSM 2008]
          Length = 264

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 100/253 (39%), Gaps = 26/253 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ VA   +G +  + G GGGL+ VP +           ++   VA+G++     
Sbjct: 14  ILILILLAVAGAFAGFVDSIVG-GGGLISVPAMLL--------TNLPPSVALGSNKLSSI 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  + +   R+  ++  +++  +    + +++ +L +  +   ++     I  + + +
Sbjct: 65  FGAGSASITFLRNYMVDFSLVRKLLPFTFVGSMLGTLAVVSLPPLYVKPIIIILLVCVTL 124

Query: 140 LMLKRDRLYCERKFPDNYVKYI-----WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            ++ +       +      K +     + +  G   G +G G G F  +  +F G     
Sbjct: 125 FVVFKKDWGEINRTSQVAGKALYICMAFALGIGIYDGFIGPGTGTFLIMGFIFTGFDFLH 184

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A +  ++      +LLV +Y            LG VNI   L      I+   + + L
Sbjct: 185 ASANAKILNFTSNLASLLVFLY------------LGHVNIMYGLAAGVGQIIGAYVGSHL 232

Query: 255 SYMIGKKYLTIGF 267
           + + G   + + F
Sbjct: 233 AIVKGSSLVRVVF 245


>gi|289549731|ref|YP_003470635.1| hypothetical protein SLGD_00360 [Staphylococcus lugdunensis
           HKU09-01]
 gi|315659644|ref|ZP_07912505.1| conserved membrane protein YtnM [Staphylococcus lugdunensis M23590]
 gi|289179263|gb|ADC86508.1| membrane protein, putative [Staphylococcus lugdunensis HKU09-01]
 gi|315495377|gb|EFU83711.1| conserved membrane protein YtnM [Staphylococcus lugdunensis M23590]
          Length = 299

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 83/259 (32%), Gaps = 24/259 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +A FL+  + G  G+G G       S      GI  +I       T       T+
Sbjct: 4   LLIFALAGFLAQLVDGSLGMGFGA----SSSSILLTYGITPAIV----SATVHFSEIATT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H +   ++   +        I   + +  ++H+  S +    AIF L MG  +L
Sbjct: 56  AASGTSHWKFDNVHRSTMLKLAIPGAIFGFLGAAFLTHIHSSVIKPYIAIFLLAMGFYIL 115

Query: 143 KRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKA 195
            +     + +          +     G + G L    G G G     ++L         A
Sbjct: 116 YQFLFRRQHETHEHVGQLSGWKLIPQGAIAGLLDAIGGGGWGPVNTPILLSSKKIQPRYA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T +     +     L  I             +  +N   V+ +    +   P++  L+
Sbjct: 176 IGTVSASEFFVTLATSLSFILF---------LGITQINWWLVVALSIGGMAAAPISAYLT 226

Query: 256 YMIGKKYLTIGFSMIMFTT 274
            ++    L I    ++  T
Sbjct: 227 KILPINILAICVGGLIIFT 245


>gi|149184043|ref|ZP_01862401.1| hypothetical Membrane Spanning Protein [Bacillus sp. SG-1]
 gi|148848249|gb|EDL62541.1| hypothetical Membrane Spanning Protein [Bacillus sp. SG-1]
          Length = 176

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +  +F+ G  SGLFG+GGG +MVP +   F           HVA+ TS+ ++  +++
Sbjct: 59  VLGVTIAFIVGFSSGLFGIGGGSLMVPAMILIFLF-------PPHVAVATSMFMVFLSAL 111

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +S   H   G IN       I          + + S +  + L     I  +L+GI ++ 
Sbjct: 112 VSSATHIYLGNINWLYALAVIPGAWFGAKGGAYLNSKLQSAALVNILRIILVLIGIRLVY 171

Query: 144 R 144
           +
Sbjct: 172 Q 172



 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 54/169 (31%), Gaps = 33/169 (19%)

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPD--------------------NYVKYIWGMVTGFL 169
           F  F +L+  +++ R+++     F                        +      + GF 
Sbjct: 12  FGFFMILVSFILMIRNKIKPIETFKTSSYQRSFTDAEGKEYTYGFPPVLGVTIAFIVGFS 71

Query: 170 SGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG  G+GGG      M+  +    + A ATS  +  L A  +    IY            
Sbjct: 72  SGLFGIGGGSLMVPAMILIFLFPPHVAVATSMFMVFLSALVSSATHIY------------ 119

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           LG +N    L ++P +         L+  +    L     +I+      
Sbjct: 120 LGNINWLYALAVIPGAWFGAKGGAYLNSKLQSAALVNILRIILVLIGIR 168


>gi|15602226|ref|NP_245298.1| hypothetical protein PM0361 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720606|gb|AAK02445.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 254

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 107/264 (40%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + L+   + ++G +  + G GGGL+ +P L     + G+  +    +A+GT+     
Sbjct: 5   INVLVLLFAVALVAGFIDAIAG-GGGLITIPALL----MTGMPPA----LALGTNKLQAC 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  + +   R   +N+  +   + +  I   + +++I  VD + + K      L +G+
Sbjct: 56  GGSFSASLYFLRQRAVNLAEVWLILLMTFIGASLGTVLIQLVDSAIIKKVLPFLILAIGL 115

Query: 140 LMLKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
             L    L  E +          +  G+  GF  G  G G G   +L  ++  G ++ KA
Sbjct: 116 YFLFSPTLGNEDRQKRISYLAFAFTAGLGIGFYDGFFGPGTGSLLSLAFVMLLGFNLTKA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           TA +  ++      +L+  +  G  +     WS+GF        ++    +   L  K+ 
Sbjct: 176 TAHAKVLNFTSNVASLIFFLIGGQIM-----WSVGF-------AMMAGQFIGANLGAKMV 223

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              GK  +     ++ F  +   A
Sbjct: 224 LSKGKTLIRPMVVVMSFIMTMKMA 247


>gi|302348364|ref|YP_003816002.1| predicted permease [Acidilobus saccharovorans 345-15]
 gi|302328776|gb|ADL18971.1| predicted permease [Acidilobus saccharovorans 345-15]
          Length = 273

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 80/214 (37%), Gaps = 21/214 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +++  + G   GL G GG ++ VP+L     L  I +    H+A+GT+   +   + 
Sbjct: 5   ILSVISGVVVGFSLGLIGGGGSILAVPLLLYFVGLSSIPN--AAHIALGTTDLAVGMNAY 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++   H +   ++ K+   +  V  +  ++ + +        L   FAI  +++G+ +  
Sbjct: 63  INSYMHLKKRNVSPKVGGIFAGVGVVGALLGTYLGHITPGGRLLLYFAIAMIVLGVYIGF 122

Query: 144 RDRLY------------------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
                                   +       +  I+G V G +SG  G+GGG      +
Sbjct: 123 FRNAAKAGTHEEVSRVVEAYSRCPKLTAKVASLVAIFGFVVGLISGYFGIGGGFLIVPAL 182

Query: 186 LF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
           +F  G  I +A  TS            L     G
Sbjct: 183 MFSSGLCITRAIGTSLLSVGTFGMAGGLEYAVYG 216



 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+ +  F+ G +SG FG+GGG ++VP L            +C+  A+GTSL  +    + 
Sbjct: 155 LVAIFGFVVGLISGYFGIGGGFLIVPALMF-------SSGLCITRAIGTSLLSVGTFGMA 207

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +E+  +G     I   ++        + + +     K  L +A+ I  +L+GI M+ +
Sbjct: 208 GGLEYAVYGDTLFIISLLYVLGGVGGGFLGTSLAVKAPKKTLQRAYGIIIVLVGIYMIFK 267


>gi|269976239|ref|ZP_06183235.1| permease [Mobiluncus mulieris 28-1]
 gi|269935568|gb|EEZ92106.1| permease [Mobiluncus mulieris 28-1]
          Length = 418

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 7/119 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +    +     G ++G  G+GGG++ VPVL               H A+  SL V+  +S
Sbjct: 69  LIFAALIGVGVGMVAGSLGIGGGMLAVPVLVYLL-------GQDPHAAVAESLVVVLASS 121

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             +     R G + +     +     +   + + +   +    +  AFA    ++  LM
Sbjct: 122 AAALPSRFRRGQVRLGTGLIFGMCSLVGAGIGTWLNRAISGEVVMLAFAALLAVVSALM 180



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 49/140 (35%), Gaps = 29/140 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V   L+G L   FG+GGG  +VP+L    +         + VA GTS  V++  S
Sbjct: 279 LPMFLVLGTLTGILVSFFGIGGGFAVVPLLVLVMRY-------PIRVAQGTSFIVMSVVS 331

Query: 83  VMSFMEHRRHG----------------------TINMKILKDWIFVLPITTVVTSLMISH 120
           V S +                             ++  +   +     I   + S + + 
Sbjct: 332 VASILTRVLEPVVMAALAGMATLAGGIVPTEPLRVDWLVALAFALCSGIGASIGSPLSNR 391

Query: 121 VDKSFLNKAFAIFCLLMGIL 140
              S L  AF    + + + 
Sbjct: 392 ARASTLTFAFVGLLVAIAVY 411



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 11/132 (8%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G +TG L    G+GGG     L++      I  A  TS  V ++++  ++L R+
Sbjct: 280 PMFLVLGTLTGILVSFFGIGGGFAVVPLLVLVMRYPIRVAQGTSFIVMSVVSVASILTRV 339

Query: 216 YSGWGLNGLPPWSLGF----------VNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
                +  L   +             V+    L     S +   + + LS       LT 
Sbjct: 340 LEPVVMAALAGMATLAGGIVPTEPLRVDWLVALAFALCSGIGASIGSPLSNRARASTLTF 399

Query: 266 GFSMIMFTTSFV 277
            F  ++   +  
Sbjct: 400 AFVGLLVAIAVY 411



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 15/121 (12%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
            + G+  G ++G+LG+GGG+    ++++  G   + A A S  V    +           
Sbjct: 73  ALIGVGVGMVAGSLGIGGGMLAVPVLVYLLGQDPHAAVAESLVVVLASS----------- 121

Query: 219 WGLNGLPP-WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                LP  +  G V +G  LI    S++   + T L+  I  + + + F+ ++   S +
Sbjct: 122 --AAALPSRFRRGQVRLGTGLIFGMCSLVGAGIGTWLNRAISGEVVMLAFAALLAVVSAL 179

Query: 278 F 278
            
Sbjct: 180 M 180


>gi|68248803|ref|YP_247915.1| hypothetical protein NTHI0295 [Haemophilus influenzae 86-028NP]
 gi|145628505|ref|ZP_01784305.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           22.1-21]
 gi|145639743|ref|ZP_01795345.1| lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase
           [Haemophilus influenzae PittII]
 gi|68057002|gb|AAX87255.1| concerved hypothetical protein [Haemophilus influenzae 86-028NP]
 gi|144978975|gb|EDJ88661.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           22.1-21]
 gi|145271111|gb|EDK11026.1| lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase
           [Haemophilus influenzae PittII]
 gi|309750385|gb|ADO80369.1| Putative permease YcfA [Haemophilus influenzae R2866]
          Length = 255

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 100/239 (41%), Gaps = 25/239 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + ++    F++  +  + G GGGL+ +P L     + G+  +    +A+GT+     
Sbjct: 5   IDLLAILFCVGFVASFIDAIAG-GGGLITIPALL----MTGMPPA----MALGTNKLQAM 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ + +   R   +N++ +   +  + + + + +L+I  +D +   K      L +G+
Sbjct: 56  GGALSASLYFLRKRAVNLRDIWFILIWVFLGSALGTLLIQSIDVAIFKKMLPFLILAIGL 115

Query: 140 LMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
             L   +L  E   ++        +     GF  G  G G G I +   +   G ++ KA
Sbjct: 116 YFLFTPKLGDEDRKQRLSYMLFGLLVSPFLGFYDGFFGPGTGSIMSLACVTLLGFNLPKA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           TA +  ++      +  + +  G  L     W +GFV       ++  SIL   L  K+
Sbjct: 176 TAHAKVMNFTSNLASFALFLLGGQIL-----WKVGFV-------MMAGSILGANLGAKM 222


>gi|332520864|ref|ZP_08397324.1| protein of unknown function DUF81 [Lacinutrix algicola 5H-3-7-4]
 gi|332043394|gb|EGI79590.1| protein of unknown function DUF81 [Lacinutrix algicola 5H-3-7-4]
          Length = 128

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 10/116 (8%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI-APTSVMSFMEHRR 91
           +G  SG+FGVGGG++MVP++  A            H A GTSL V+  P + ++   +  
Sbjct: 20  AGVFSGMFGVGGGVIMVPLMVFAL-------GYTQHQAQGTSLAVLAVPVTFLAAYTYHT 72

Query: 92  HGT--INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            G   IN K          +     + +   ++++ L K F++  +++ + M    
Sbjct: 73  TGDNPINFKYALIIAVCFVLGGYFGTKIAISINETLLKKIFSVLLVIVAVKMFFSK 128



 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 10/113 (8%)

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G  SG  GVGGG+    LM+F  G + ++A  TS  V   +A P   +  Y+       P
Sbjct: 21  GVFSGMFGVGGGVIMVPLMVFALGYTQHQAQGTSLAV---LAVPVTFLAAYTYHTTGDNP 77

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 +N    LII    +L     TK++  I +  L   FS+++   +   
Sbjct: 78  ------INFKYALIIAVCFVLGGYFGTKIAISINETLLKKIFSVLLVIVAVKM 124


>gi|320157075|ref|YP_004189454.1| putative permease [Vibrio vulnificus MO6-24/O]
 gi|319932387|gb|ADV87251.1| predicted permease [Vibrio vulnificus MO6-24/O]
          Length = 251

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 94/260 (36%), Gaps = 24/260 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +   S ++ TL+ L G G GL+  P+L       G+        A+ T         +
Sbjct: 7   LFLFFGSLIANTLASLAGGGAGLLQFPLLIFLGLPFGV--------ALATHKLASVALGL 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   H + G I +      I    I  ++ + ++  +          I  LL+G+    
Sbjct: 59  GAAYTHLKSGKIKLTTAFYLILTGSIGVIIGANIVLMIPSDIAEFMLGIMILLLGVYSRF 118

Query: 144 RDRLYCE-----RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
           + +L  E     R      +  +  ++ G ++G+L  G G+   L ++ ++G    +A A
Sbjct: 119 KKQLGQEEKPRNRDLSGWLLGGVGLLLIGIINGSLTAGSGLLVTLFLVRWFGYDYKQAVA 178

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +            +   ++G G   +       V+   + I+L  S L   L   ++  
Sbjct: 179 LTLIC---------VGFFWNGIGGIAVVQAGA-PVHWPWLPILLASSFLGGALGAWMTNR 228

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
              + + I F ++ F     
Sbjct: 229 YSNRTVKIAFELLTFAVGLK 248


>gi|103488618|ref|YP_618179.1| hypothetical protein Sala_3143 [Sphingopyxis alaskensis RB2256]
 gi|98978695|gb|ABF54846.1| protein of unknown function DUF81 [Sphingopyxis alaskensis RB2256]
          Length = 255

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 89/251 (35%), Gaps = 18/251 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+  F +  + G  G+  G++   +L     +     S  +HV       V   T+  S
Sbjct: 15  FILIGFAAQLVDGALGMAFGVICNTLLVAVLGVPPATASARIHV-------VEIFTTGAS 67

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + H  H  I+  +    +    I  V  + +++ +    +      + +L+GI +L R 
Sbjct: 68  GLSHLFHRNIDWPLFLRLLIPGVIGGVAGAYVLTSLHAEVVKPFVLGYLVLIGIWLLVRG 127

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
            LY  +      V  +  +  GFL  A G G G      +L  G    K   T   V   
Sbjct: 128 LLYPPKIARPKVVAPLAAVG-GFLDAAGGGGWGPVVTSNLLVQGGEPRKIVGTVNSVEFF 186

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           +A    L  I+     + L P           L ++   ++  P+   ++     K + +
Sbjct: 187 LAVAVSLAFIWQLGLDDILGP----------TLGLIIGGVVAAPIGAMMAKRFSPKLMLV 236

Query: 266 GFSMIMFTTSF 276
               ++  TS 
Sbjct: 237 MVGTVLTATSA 247


>gi|320529726|ref|ZP_08030805.1| hypothetical protein HMPREF9555_00876 [Selenomonas artemidis F0399]
 gi|320138087|gb|EFW29990.1| hypothetical protein HMPREF9555_00876 [Selenomonas artemidis F0399]
          Length = 252

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 83/232 (35%), Gaps = 26/232 (11%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            L+ +   + +H A+  +LG +A T++   + H R G +             +  ++ ++
Sbjct: 26  TLLVVGFGVPIHQALAVALGSMAFTTLSGAVSHYREGEVVPCTGFVIGAGGLVGALIGAV 85

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRD------------RLYCERKFPDNYVKYIWGM 164
           + +H++   L+    +       L+  R             R       P      + G+
Sbjct: 86  ISNHIESGNLSLFTGLMLESSAFLLYLRIYQAEWLERHIHVRAELLMGRPLYIYGSLTGL 145

Query: 165 VTGFLSGALGVGGGI-FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           + G L+GA G+G        LM+ +G  + +A  T+  +   I+    +  +  G     
Sbjct: 146 LCGILAGAFGIGSAAYIQIALMVVFGVPLLQAIGTTMMIIVPISISGGIGYLLYGQFEPV 205

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                   + +  ++ +   S        KL+++  +  L   F + +    
Sbjct: 206 --------IFLQTLVALSVGSYF----GAKLTHLAPRAVL-RFFIVALPAVG 244



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 46/122 (37%), Gaps = 7/122 (5%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
                 +   L G L+G FG+G    +   L   F        + +  A+GT++ +I P 
Sbjct: 136 LYIYGSLTGLLCGILAGAFGIGSAAYIQIALMVVF-------GVPLLQAIGTTMMIIVPI 188

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+   + +  +G     I    +  L + +   + +     ++ L         + G++M
Sbjct: 189 SISGGIGYLLYGQFEPVIFLQTLVALSVGSYFGAKLTHLAPRAVLRFFIVALPAVGGLIM 248

Query: 142 LK 143
           + 
Sbjct: 249 VL 250


>gi|315604365|ref|ZP_07879431.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315314071|gb|EFU62122.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 262

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 87/269 (32%), Gaps = 29/269 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I   ++     G + G  G GGG++ VP+L               H A G SL ++  T
Sbjct: 1   MIIEALLIGAFVGIVVGSLGAGGGILSVPILVYLL-------GQDPHQATGLSLIIVGLT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + +S     R   +  +    +  V    T   S +   V  S L  +F     ++ + M
Sbjct: 54  AAVSLATRARGTDVAWREGSLFALVGLAGTWAGSTLGPLVSASALMLSFCALLGVVALFM 113

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFL--------------SGALGVGGGIFTNLLMLF 187
           + R  L      P   V          L                    GG      L L 
Sbjct: 114 V-RSHLSPVSSLPKAPVSQAAPSGVSTLVRVVVLATATGFLTGFFGVGGGFAIVPALHLA 172

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
               + +A+ATS  V  + A   ++ R  +G          +       V +    S+  
Sbjct: 173 LRYPMKRASATSLLVMVITAAFGVVSRSLAGSFTITAEAGVM-------VALFTAASMAG 225

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
             +  +++  +  + L + F+ ++   + 
Sbjct: 226 GIVGARVTTRVPNRVLGLVFAALLVGVAL 254


>gi|228951420|ref|ZP_04113528.1| integral membrane protein [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228808266|gb|EEM54777.1| integral membrane protein [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 255

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K     + +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVK--YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V     +    GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFVFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 179 AGNAKLLNLGSNVGALLMFMYVG 201



 Score = 35.8 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 51/120 (42%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   ++P++ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118


>gi|332663781|ref|YP_004446569.1| hypothetical protein Halhy_1810 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332332595|gb|AEE49696.1| protein of unknown function DUF81 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 288

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 52/250 (20%), Positives = 92/250 (36%), Gaps = 21/250 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            ++A F++  + G  G+  G+      +     +GI  +    +A  +       T+  S
Sbjct: 48  YLLAGFVAQLVDGALGMAYGV----SCTTLLLHLGIPPA----LATASVHTAEVFTTGAS 99

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-DKSFLNKAFAIFCLLMGILMLKR 144
            + H   G ++ K+    I    I  VV + +IS V D   +    A + L +GI++L +
Sbjct: 100 GLSHLYLGNVDKKLFLRLIVPGVIGAVVGAYLISEVFDGKVIKPYIAAYLLFLGIIILLK 159

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
                       YV  + G+  GFL    G G G      ++  G    K   T      
Sbjct: 160 SFQTRVPTEKVRYV-SLLGVTGGFLDAVGGGGWGPIVTSNIVNQGNDPRKTVGTVNTAEF 218

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
            +AF +  V ++            +G  +   V  ++   IL  P    L + I  K L 
Sbjct: 219 FVAFFSTGVFLFF-----------VGVESWQVVAGLIAGGILAAPFGAWLVHKISAKALM 267

Query: 265 IGFSMIMFTT 274
               +I+  T
Sbjct: 268 FLVGLIIILT 277


>gi|228933707|ref|ZP_04096554.1| Permease [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228825940|gb|EEM71726.1| Permease [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1]
          Length = 275

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 98/261 (37%), Gaps = 36/261 (13%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
            G L G+ G+GG  ++ P L       GI  S    +A+GT L   + T +    +H + 
Sbjct: 30  VGVLVGMTGIGGAALLTPFLLTV----GIPPS----IAVGTDLLYNSITKMFGITQHWKQ 81

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIFCLLMGILMLKRDR 146
            TIN K+++        + ++   +I  +       +  L        ++  I +  +  
Sbjct: 82  KTINFKLVRYLALGSIPSAIIAITIIHFLPILHQDREEVLKYIIGYVLIVAAISIFIKIF 141

Query: 147 LYCERKFP---------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKAT 196
            Y +                V    G + GF+ G   VG G    ++M++ Y     +  
Sbjct: 142 FYNQSVPNYFQKQSLEQKKNVTIFIGAILGFVVGLTSVGSGSLFAIVMIYLYQMKPSELV 201

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T    + ++   A ++ +             LG V+    + +L  SI    + +KLS 
Sbjct: 202 GTDITHAFILVTVASILNM------------QLGNVDYILTINLLIGSIPGVIIGSKLSS 249

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            I  K L +  ++I+F +   
Sbjct: 250 KIPVKPLQLLLALIIFVSGLK 270



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 53/139 (38%), Gaps = 7/139 (5%)

Query: 4   LLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD 63
             YN S+  +  K  +     + I    + G + GL  VG G +   V+   +Q+   + 
Sbjct: 141 FFYNQSVPNYFQKQSLEQKKNVTIFIGAILGFVVGLTSVGSGSLFAIVMIYLYQMKPSEL 200

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
                  +GT +        ++ + + + G ++  +  + +       ++ S + S +  
Sbjct: 201 -------VGTDITHAFILVTVASILNMQLGNVDYILTINLLIGSIPGVIIGSKLSSKIPV 253

Query: 124 SFLNKAFAIFCLLMGILML 142
             L    A+   + G+ ++
Sbjct: 254 KPLQLLLALIIFVSGLKLV 272


>gi|153000146|ref|YP_001365827.1| hypothetical protein Shew185_1617 [Shewanella baltica OS185]
 gi|304409735|ref|ZP_07391355.1| protein of unknown function DUF81 [Shewanella baltica OS183]
 gi|307304091|ref|ZP_07583844.1| protein of unknown function DUF81 [Shewanella baltica BA175]
 gi|151364764|gb|ABS07764.1| protein of unknown function DUF81 [Shewanella baltica OS185]
 gi|304352253|gb|EFM16651.1| protein of unknown function DUF81 [Shewanella baltica OS183]
 gi|306912989|gb|EFN43412.1| protein of unknown function DUF81 [Shewanella baltica BA175]
          Length = 257

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 88/263 (33%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ V   ++G +  + G GGGL+ +P L            I  H  +GT+    +  S 
Sbjct: 11  ALLAVIGLIAGFIDAVVG-GGGLLSIPALLTL--------GIAPHTVLGTNKLAASFGSS 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+   + R                 I  V+ S ++  VD  +L K   +  + + I  L 
Sbjct: 62  MAAWTYYRQHLFKPSFWYMAFIATFIGAVLGSFLVYLVDTQWLEKVLPLLIIGIAIYSLV 121

Query: 144 RDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
                           P    +++ G+  G   G  G G G F T      Y   +  + 
Sbjct: 122 SPNAISDVNCQAPTSKPPAKQQWLQGLALGTYDGFAGPGIGAFWTVTSGSLYKLPLLHSC 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++      AL +  +            LG V     L +    +L + +  + + 
Sbjct: 182 GLARAMTFTSNLTALTIFGW------------LGQVEWQIGLWMGLCMMLGSFIGARCAI 229

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F +I+   +   A
Sbjct: 230 KFGMPFIRPLFILIVLMIAANLA 252


>gi|192288799|ref|YP_001989404.1| hypothetical protein Rpal_0368 [Rhodopseudomonas palustris TIE-1]
 gi|192282548|gb|ACE98928.1| protein of unknown function DUF81 [Rhodopseudomonas palustris
           TIE-1]
          Length = 267

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 72/202 (35%), Gaps = 15/202 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + +  L G +  L G GG ++ VP+L     +         H+A+GTS   +A +++ + 
Sbjct: 13  VASGALVGFILALIGGGGSVLAVPLLVYVVGVR------SPHMAIGTSSIAVAISALANM 66

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           + H   G +       +           + +   +D   L   F +  +++G LM +++R
Sbjct: 67  LSHWAAGNVRWACAIVFSAAGIGGAFAGATIAKQIDGQKLLILFGLLMIVIGALMSRKNR 126

Query: 147 LYCERKFPDN--------YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
              +                    G   G L+G  G+GGG      L+L  G  +  A  
Sbjct: 127 GGGDPAVRLTRDTARAMLPRLIGTGFGVGLLAGFFGIGGGFLIVPGLILATGMPLTSAIG 186

Query: 198 TSAGVSALIAFPALLVRIYSGW 219
           TS                 SG 
Sbjct: 187 TSLVAVVAFGASTATSYALSGL 208



 Score = 37.0 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 14/125 (11%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG--ASIYKATATSAGVSALIAFPALLVR 214
                 G + GF+   +G GG +    L+++     S + A  TS+   A+ A   +L  
Sbjct: 10  LATVASGALVGFILALIGGGGSVLAVPLLVYVVGVRSPHMAIGTSSIAVAISALANMLS- 68

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                       W+ G V     ++     I        ++  I  + L I F ++M   
Sbjct: 69  -----------HWAAGNVRWACAIVFSAAGIGGAFAGATIAKQIDGQKLLILFGLLMIVI 117

Query: 275 SFVFA 279
             + +
Sbjct: 118 GALMS 122


>gi|145633793|ref|ZP_01789517.1| lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase
           [Haemophilus influenzae 3655]
 gi|144985364|gb|EDJ92194.1| lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase
           [Haemophilus influenzae 3655]
          Length = 255

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 101/239 (42%), Gaps = 25/239 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + ++    F++  +  + G GGGL+ +P L     + G+  +    +A+GT+     
Sbjct: 5   IDLLAILFCVGFVASFIDAIAG-GGGLITIPALL----MTGMPPA----MALGTNKLQAM 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ + +   R  ++N++ +   +  + + + + +L+I  +D +   K      L +G+
Sbjct: 56  GGALSASLYFLRKRSVNLRDIWFILIWVFLGSALGTLLIQSIDVAIFKKMLPFLILAIGL 115

Query: 140 LMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
             L   +L  E   ++        +     GF  G  G G G I +   +   G ++ KA
Sbjct: 116 YFLFTPKLGDEDRKQRLSYLLFGLLVSPFLGFYDGFFGPGTGSIMSLACVTLLGFNLPKA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           TA +  ++      +  + +  G  L     W +GFV       ++  SIL   L  K+
Sbjct: 176 TAHAKVMNFTSNLASFTLFLLGGQIL-----WKVGFV-------MMAGSILGANLGAKM 222


>gi|288575323|ref|ZP_05976732.2| putative integral membrane protein [Neisseria mucosa ATCC 25996]
 gi|288568442|gb|EFC90002.1| putative integral membrane protein [Neisseria mucosa ATCC 25996]
          Length = 256

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 91/265 (34%), Gaps = 24/265 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +  L+++  F +G +    G GGGL+ +P L           S+       +  G +  
Sbjct: 5   SFFYLLLLTGFCAGLMDAAVG-GGGLLQIPGLFNLLPTSTPVASVMGVNKFASCCGTVTA 63

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T      ++ R   +  K+L     +    + + +  +      ++  A  +  + M + 
Sbjct: 64  TG-----QYLRRIPVPWKMLLPAAVLAFAASYLGAKAVVFFPVQYMKPAMLVIMIAMCVY 118

Query: 141 MLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYK 194
              +  L    +              +G + GF  G  G G G     + + FYG     
Sbjct: 119 TFIKKDLGQTVRTEKLTRRETLWGLFFGALIGFYDGIFGPGTGSLLAFVFVRFYGYDFLT 178

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A A+   +++     AL   I              G V     + +   ++    +  KL
Sbjct: 179 ANASGKVINSTTNLAALTFFIPQ------------GHVVWAWAIPLALANLCGGMVGAKL 226

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVFA 279
           +   G ++L  GF +++  T   FA
Sbjct: 227 AIRGGTQFLRYGFMVLLCLTIGKFA 251


>gi|228474502|ref|ZP_04059235.1| transporter [Staphylococcus hominis SK119]
 gi|228271531|gb|EEK12893.1| transporter [Staphylococcus hominis SK119]
          Length = 261

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 87/233 (37%), Gaps = 25/233 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +P L       G+  S    +A+GT+    A  S+ S ++  + G ++ KI   
Sbjct: 30  GGGLISIPALLAI----GMPPS----LALGTNKLASAFGSLTSAIKFLKSGNVDKKIAFR 81

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW 162
               + I  V  + + + +    L     +   L+ I  + +      R F    +    
Sbjct: 82  LFPFVFIFAVGGASLATFLPSEVLKPLVIVILTLVLIYTIFKKEWGNVRTFSKLTISKAI 141

Query: 163 GMV-----TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
             +      GF  G LG G G F   ++L +G     A   +  ++      AL + I  
Sbjct: 142 AFISLLLLIGFYDGFLGGGTGSFMLFVLLMFGFDFLSAAGNAKVLNFASNVGALTLFII- 200

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
                      LG VNI   LI+    ++ +      +   G  Y+ I F ++
Sbjct: 201 -----------LGQVNITYGLIMAVSMVIGSYTGAHFAIKKGVGYVKIVFIIV 242


>gi|148980739|ref|ZP_01816195.1| hypothetical protein VSWAT3_14822 [Vibrionales bacterium SWAT-3]
 gi|145961089|gb|EDK26408.1| hypothetical protein VSWAT3_14822 [Vibrionales bacterium SWAT-3]
          Length = 251

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 100/261 (38%), Gaps = 26/261 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +   S ++ TL+ L G G GL+  P+L            +   VA+ T         +
Sbjct: 7   LALFFGSLIANTLASLSGGGAGLLQFPLLIFL--------GLPFSVALATHKVASVALGL 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   H + GT++ KI    I V  I  +V + ++  +  +   K      L +G+    
Sbjct: 59  GAAYTHIKGGTLSWKICIYLIIVGSIGVIVGANIVLMIPDAIAQKLLGAMILALGVYSRL 118

Query: 144 RDRLYCERKFPDNYVK-YIWGMV----TGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
           + +L  E++  +  +K +I G +     G ++G+L  G G+   L ++ ++G +  +A A
Sbjct: 119 KKQLGQEQQLKNRDMKGWIVGGIGLALIGIINGSLTAGSGLLVTLFLVRWFGFTYKQAVA 178

Query: 198 -TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T   V         +  + +G             +    + I+L  S +   L   L+ 
Sbjct: 179 LTMICVGLFWNGIGGIAIVQAGAP-----------IYWVWLPILLLSSFIGGSLGAVLAN 227

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
               + +   F ++ F     
Sbjct: 228 RSSNQLVKTAFEILTFAVGIK 248


>gi|30019114|ref|NP_830745.1| hypothetical protein BC0959 [Bacillus cereus ATCC 14579]
 gi|229126364|ref|ZP_04255381.1| integral membrane protein [Bacillus cereus BDRD-Cer4]
 gi|29894657|gb|AAP07946.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579]
 gi|228657135|gb|EEL12956.1| integral membrane protein [Bacillus cereus BDRD-Cer4]
          Length = 255

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SILIILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +N+K     + +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GSATSNIVFYRSGNLNLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVK--YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V     +    GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFVFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 179 AGNAKLLNLGSNVGALLMFMYVG 201



 Score = 37.4 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 51/120 (42%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +N+ +   ++P++ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLNLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118


>gi|16272162|ref|NP_438367.1| hypothetical protein HI0198 [Haemophilus influenzae Rd KW20]
 gi|145637362|ref|ZP_01793022.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           PittHH]
 gi|260580920|ref|ZP_05848744.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           RdAW]
 gi|260582414|ref|ZP_05850206.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           NT127]
 gi|2506697|sp|P46490|Y198_HAEIN RecName: Full=UPF0721 transmembrane protein HI_0198
 gi|1573158|gb|AAC21867.1| conserved hypothetical transmembrane protein [Haemophilus
           influenzae Rd KW20]
 gi|145269454|gb|EDK09397.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           PittHH]
 gi|260092409|gb|EEW76348.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           RdAW]
 gi|260094565|gb|EEW78461.1| penicillin-insensitive murein endopeptidase [Haemophilus influenzae
           NT127]
          Length = 255

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 99/239 (41%), Gaps = 25/239 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + ++    F++  +  + G GGGL+ +P L     + G+  +    +A+GT+     
Sbjct: 5   IDLLAILFCVGFVASFIDAIAG-GGGLITIPALL----MTGMPPA----MALGTNKLQAM 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ + +   R   +N++ +   +  + + + + +L+I  +D +   K      L +G+
Sbjct: 56  GGALSASLYFLRKRAVNLRDIWFILIWVFLGSALGTLLIQSIDVAIFKKMLPFLILAIGL 115

Query: 140 LMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
             L   +L  E   ++        +     GF  G  G G G I +   +   G ++ KA
Sbjct: 116 YFLFTPKLGDEDRKQRLSYLLFGLLVSPFLGFYDGFFGPGTGSIMSLACVTLLGFNLPKA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            A +  ++      +  + +  G  L     W +GFV       ++  SIL   L  K+
Sbjct: 176 AAHAKVMNFTSNLASFALFLLGGQIL-----WKVGFV-------MMAGSILGANLGAKM 222


>gi|160874768|ref|YP_001554084.1| hypothetical protein Sbal195_1651 [Shewanella baltica OS195]
 gi|160860290|gb|ABX48824.1| protein of unknown function DUF81 [Shewanella baltica OS195]
 gi|315267010|gb|ADT93863.1| protein of unknown function DUF81 [Shewanella baltica OS678]
          Length = 257

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 88/263 (33%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ V   ++G +  + G GGGL+ +P L            I  H  +GT+    +  S 
Sbjct: 11  ALLAVIGLIAGFIDAVVG-GGGLLSIPALLTL--------GIAPHTVLGTNKLAASFGSS 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+   + R                 I  V+ S ++  VD  +L K   +  + + I  L 
Sbjct: 62  MAAWTYYRQHLFKPSFWYMAFIATFIGAVLGSFLVYLVDTQWLEKVLPLLIIGIAIYSLI 121

Query: 144 RDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
                           P    +++ G+  G   G  G G G F T      Y   +  + 
Sbjct: 122 SPNAISDVNCQAPTSKPPAKQQWLQGLALGTYDGFAGPGIGAFWTVTSGSLYKLPLLHSC 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++      AL +  +            LG V     L +    +L + +  + + 
Sbjct: 182 GLARAMTFTSNLTALTIFGW------------LGQVEWQIGLWMGLCMMLGSFIGARCAI 229

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F +I+   +   A
Sbjct: 230 KFGMPFIRPLFILIVLMIAANLA 252


>gi|154175043|ref|YP_001408863.1| hypothetical protein CCV52592_1682 [Campylobacter curvus 525.92]
 gi|112803739|gb|EAU01083.1| putative domain of unknown function [Campylobacter curvus 525.92]
          Length = 246

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 79/221 (35%), Gaps = 21/221 (9%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V+VPV+              +  A+G S+  +  +SV     + +   +++K      F
Sbjct: 26  TVVVPVMILF--------GYDIKYAIGVSIMQMIFSSVFGSFVNFKSKMLDIKPALILGF 77

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
                 + +  ++S+    FL     +  ++  I + K              + ++ G+V
Sbjct: 78  GGFCGALTSGFIVSYFSSKFLLGVLILVQIINLIKLFKTPAEPVGEANGSKILLFLVGLV 137

Query: 166 TGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            G ++ ++G+GG +    +++ F    I +A  T        +    L         + L
Sbjct: 138 VGAVAISVGIGGSVLVMPILISFLNYDIKRAVGTGLFFVVFSSTAGFLS-----LAAHEL 192

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
             + +G       +++   S++      K S+ I K     
Sbjct: 193 VHYDVG-------IMLGLGSLIGVYFGVKTSHKISKTAQKR 226



 Score = 37.7 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 36/99 (36%), Gaps = 7/99 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ +   + G ++   G+GG ++++P+L           +  +  A+GT L  +  +S 
Sbjct: 129 ILLFLVGLVVGAVAISVGIGGSVLVMPILISFL-------NYDIKRAVGTGLFFVVFSST 181

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             F+    H  ++  +         I           + 
Sbjct: 182 AGFLSLAAHELVHYDVGIMLGLGSLIGVYFGVKTSHKIS 220


>gi|329888455|ref|ZP_08267053.1| hypothetical protein BDIM_03780 [Brevundimonas diminuta ATCC 11568]
 gi|328847011|gb|EGF96573.1| hypothetical protein BDIM_03780 [Brevundimonas diminuta ATCC 11568]
          Length = 263

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 93/260 (35%), Gaps = 24/260 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + I L+ VAS ++G +  + G GGGL+ +P L            +    A+ T+    + 
Sbjct: 7   EIIALLGVASVIAGFIDAIAG-GGGLISLPALLSV--------GLNPVAAIATNKVQGSV 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     R G ++ ++++  + +  I   + +  ++ VD  +L     +  + + + 
Sbjct: 58  GTASALWNFWRKGRVDFRLIRWPMLLTAIGAGLGAFAVTLVDTRWLMILLPVLLVGIALY 117

Query: 141 MLKRDRLYCERKF--PDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
            L   +   E                  GF  G  G G G F  L L++  G  + +ATA
Sbjct: 118 FLLGPKAADEDAHARLTPLAYAFVAGGIGFYDGFFGPGTGSFFALSLVMLLGMGLTRATA 177

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  ++ +     ++V                G V      I+     +   + +  +  
Sbjct: 178 HTKALNLMSNVVGIVVLAVG------------GHVVWVLAGIMAVGQFVGGRMGSHAAMR 225

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
            G + +     +I    +  
Sbjct: 226 FGPRLIRPLLVVISLAMTAR 245


>gi|121592682|ref|YP_984578.1| hypothetical protein Ajs_0248 [Acidovorax sp. JS42]
 gi|120604762|gb|ABM40502.1| protein of unknown function DUF81 [Acidovorax sp. JS42]
          Length = 252

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 91/253 (35%), Gaps = 25/253 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +AS L+G +  + G GGGL+++P L   F       +  M    GT+       + 
Sbjct: 4   IIVSLASLLAGFVDAIVG-GGGLILLPALFATFPTA--PPATLM----GTNKSAAIWGTG 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++  ++ R   +  + L        +     + +++ +   FL K   +  + + I  L 
Sbjct: 57  IATWQYSRRVQMRWRALLPAALAGFVGAFAGAWVVTLISADFLRKLLPLVLVALLIYTLA 116

Query: 144 RDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATA 197
           R  L           +        G+  GF  G  G G G F   L +   G     A+ 
Sbjct: 117 RKDLGRHHAPRLAAGRETLAACAIGVTIGFYDGFFGPGTGSFFVFLFVRVLGYDFLNASV 176

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           ++  ++      AL++                G V     L +   +++ + L   L+  
Sbjct: 177 SAKLLNLATNVAALILFTAK------------GHVWWHFALPLAVANVVGSLLGAHLALK 224

Query: 258 IGKKYLTIGFSMI 270
            G  ++   F ++
Sbjct: 225 HGAGFVRGIFILV 237


>gi|54114267|gb|AAV29767.1| NT02FT0564 [synthetic construct]
          Length = 301

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 104/293 (35%), Gaps = 48/293 (16%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           S +  + +  +I + + L G +  + G+GGGLV+ P+L+           + +H A+G S
Sbjct: 22  SMEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVL-------GVPLHYAIGAS 74

Query: 75  LGVIAPTSVM-SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           L  I  TS   S +  + HG    K+         +  +  + +   +    L   F   
Sbjct: 75  LVAIICTSTATSLVSLQSHGLTKEKLGLFLALATAVGAIFGAKLAVMLRAKVLFLIFGGI 134

Query: 134 CLLMGILMLKRDRLYCERKFPD-----NYVKYIWGMVTGF----------LSGALGVGGG 178
            +++ IL   + +   E K P      N ++    +V             + G + + G 
Sbjct: 135 LIVVAILSFIKKKSNAETKPPKQSFIANKLQLNDSVVIAGQKQDYNVNHPILGFIFMAGA 194

Query: 179 IF-------------TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            F                +          + +TS  +  + AF A               
Sbjct: 195 GFIGGLLGIGAGIFKVVAMDKIMKIPFRVSASTSNFIMGVTAFAATSTY----------- 243

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +  G+++      +   ++L   + +KL   I  K L + F +++F ++   
Sbjct: 244 -YFAGYIDSSITAAVALGTLLGATIGSKLMPHIPTKALRLMFFIVVFISAIQM 295



 Score = 42.0 bits (98), Expect = 0.096,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I   V+  TS  ++  T+  +   +   G I+  I         +   + S ++ H+   
Sbjct: 219 IPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSITAAVALGTLLGATIGSKLMPHIPTK 278

Query: 125 FLNKAFAIFCLLMGILMLKR 144
            L   F I   +  I M+ +
Sbjct: 279 ALRLMFFIVVFISAIQMIIK 298



 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 12/143 (8%)

Query: 135 LLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIY 193
           +++ IL L   +   E+      + +I  ++ G +   +G+GGG+    L+    G  ++
Sbjct: 9   VIISILELCIQKFSMEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVLGVPLH 68

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A   S       +    L         +GL    LG       L +   + +      K
Sbjct: 69  YAIGASLVAIICTSTATSL----VSLQSHGLTKEKLG-------LFLALATAVGAIFGAK 117

Query: 254 LSYMIGKKYLTIGFSMIMFTTSF 276
           L+ M+  K L + F  I+   + 
Sbjct: 118 LAVMLRAKVLFLIFGGILIVVAI 140


>gi|327311959|ref|YP_004338856.1| hypothetical protein TUZN_2087 [Thermoproteus uzoniensis 768-20]
 gi|326948438|gb|AEA13544.1| hypothetical protein TUZN_2087 [Thermoproteus uzoniensis 768-20]
          Length = 274

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 79/214 (36%), Gaps = 21/214 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +++  L G   GL G GG ++ VP+      L  + +S   H+A+GT+   +   + 
Sbjct: 9   ALSVISGVLVGFSLGLIGGGGSILAVPLFLYFVGLSALPNSA--HIAIGTTALAVGINAF 66

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++   H +   I  ++   +  V  + +++ + +      + L   FAI  + +GI +  
Sbjct: 67  INSYMHFKKRNIAPRVGAVFAAVGLVGSLIGAYLGHITPGTSLLTYFAIAMIALGIYVAV 126

Query: 144 RDRLY------------------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
           R                                   +G V G LSG  G+GGG      +
Sbjct: 127 RKEPARAGGLEELERVTEAARRCPRLTPSVIAKVAGFGFVVGLLSGYFGIGGGFLIVPSL 186

Query: 186 LFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
           +F  G  I +A  TS          A     Y G
Sbjct: 187 MFSAGLCITRAIGTSLLSVGTFGVAAGAEYWYYG 220



 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 7/124 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I  +    F+ G LSG FG+GGG ++VP L            +C+  A+GTSL  +  
Sbjct: 155 SVIAKVAGFGFVVGLLSGYFGIGGGFLIVPSLMF-------SAGLCITRAIGTSLLSVGT 207

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             V +  E+  +G +   +   ++        + + +     K  L KA+    + +GI 
Sbjct: 208 FGVAAGAEYWYYGNVIPLVALLYVLGGIGGGYLGTSLAVKAPKDALRKAYGAIIVAVGIY 267

Query: 141 MLKR 144
           ML R
Sbjct: 268 MLYR 271


>gi|217973886|ref|YP_002358637.1| hypothetical protein Sbal223_2726 [Shewanella baltica OS223]
 gi|217499021|gb|ACK47214.1| protein of unknown function DUF81 [Shewanella baltica OS223]
          Length = 257

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 88/263 (33%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ V   ++G +  + G GGGL+ +P L            I  H  +GT+    +  S 
Sbjct: 11  ALLAVIGLIAGFIDAVVG-GGGLLSIPALLTL--------GIAPHTVLGTNKLAASFGSS 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+   + R                 I  V+ S ++  VD  +L K   +  + + I  L 
Sbjct: 62  MAAWTYYRQHLFKPSFWYMAFIATFIGAVLGSFLVYLVDTQWLEKVLPLLIIGIAIYSLI 121

Query: 144 RDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
                           P    +++ G+  G   G  G G G F T      Y   +  + 
Sbjct: 122 SPNAISDVNCEAPTSKPPAKQQWLQGLALGTYDGFAGPGIGAFWTVTSGSLYKLPLLHSC 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++      AL +  +            LG V     L +    +L + +  + + 
Sbjct: 182 GLARAMTFTSNLTALTIFGW------------LGQVEWQIGLWMGLCMMLGSFIGARCAI 229

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F +I+   +   A
Sbjct: 230 KFGMPFIRPLFILIVLMIAANLA 252


>gi|269968624|ref|ZP_06182623.1| hypothetical protein VMC_40530 [Vibrio alginolyticus 40B]
 gi|269826765|gb|EEZ81100.1| hypothetical protein VMC_40530 [Vibrio alginolyticus 40B]
          Length = 263

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 90/261 (34%), Gaps = 26/261 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +   S ++ TL+ L G G GL+  P+L            +   VA+GT         +
Sbjct: 19  LTLFFGSLIANTLASLSGGGAGLLQFPLLIFL--------GLPFSVALGTHKVASVALGL 70

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   H R GTI  KI    I    I  ++ + +I  +      K      L +GI    
Sbjct: 71  GAASTHLRSGTIKWKIALYLILSGSIGVILGANLIVQIPDGIAEKMLGTMILALGIYSRF 130

Query: 144 RDRLYCE-----RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
           +  L        R      +  I  +  G ++G+L  G G+   L ++ ++G    +A A
Sbjct: 131 KTSLGQAEVIRNRHPIGWVIGGIGLLFIGIINGSLTAGSGLLVTLFLVRWFGYDYKQAVA 190

Query: 198 -TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T   V         +    +G             ++   + ++L  S L   L    + 
Sbjct: 191 YTMICVGLFWNGIGGIAVAQAGTP-----------IHWAWLPVLLLSSFLGGSLGAWAAT 239

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
               + + + F ++ F     
Sbjct: 240 RYSNRVIKVAFEILTFAVGIK 260


>gi|206578099|ref|YP_002237275.1| hypothetical protein KPK_1422 [Klebsiella pneumoniae 342]
 gi|290508414|ref|ZP_06547785.1| hypothetical protein HMPREF0485_00185 [Klebsiella sp. 1_1_55]
 gi|206567157|gb|ACI08933.1| putative membrane protein [Klebsiella pneumoniae 342]
 gi|289777808|gb|EFD85805.1| hypothetical protein HMPREF0485_00185 [Klebsiella sp. 1_1_55]
          Length = 269

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 96/236 (40%), Gaps = 25/236 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++   + L+G +  L G GGGL+ VP L       G+  +     A+ T+       S
Sbjct: 15  LVVLFFVAILAGFIDSLAG-GGGLLTVPALM----AAGMPPAQ----ALATNKLQACGGS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + +   R   +++   K  I +  I +   +L++ HV    L +   +  + +G+  L
Sbjct: 66  LSATLYFVRRKVVSLADQKLNILMTFIGSTAGALLVQHVQSDILKQILPLLVIGIGLYFL 125

Query: 143 KRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
              +L     +R+        + G   GF  G  G G G F  L  +   G ++ K+TA 
Sbjct: 126 LMPKLGEADRQRRLYGLPFALVAGGSVGFYDGFFGPGAGSFYALAFVTLAGFNLAKSTAH 185

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           +  ++A      LL+ I  G  +     W+ GFV       ++    +     ++L
Sbjct: 186 AKLLNATSNVGGLLLFIIGGKVI-----WATGFV-------MMAGQFIGARAGSRL 229


>gi|332521553|ref|ZP_08398007.1| protein of unknown function DUF81 [Lacinutrix algicola 5H-3-7-4]
 gi|332042952|gb|EGI79151.1| protein of unknown function DUF81 [Lacinutrix algicola 5H-3-7-4]
          Length = 268

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 8/120 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI++     G L+GL G GGG +++P L            + M VA+ TSL +IA  S++
Sbjct: 149 LILIEGLFVGALTGLIGAGGGFLIIPALVIL-------AKVKMKVAIATSLIIIAAKSLL 201

Query: 85  SFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            F         +N   L  +  +  I   + S + + VD   L K F  F  LM I +  
Sbjct: 202 GFFLGDAITMNVNWSFLILFTTISLIGIFLGSYLSNFVDGKKLKKGFGYFIFLMAIFIFY 261



 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 58/247 (23%), Positives = 94/247 (38%), Gaps = 35/247 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VPVL+  F       +I    A   SL V+  ++++  ++    G ++ K    +   
Sbjct: 29  LAVPVLAYLF-------NINEKTATAYSLFVVGFSALVGGLKQHLKGYVDWKTAIVFGVP 81

Query: 107 LPITTVVTSLMISHVDKSFL-----------NKAFAIFCLLM---GILMLK-RDRLYCER 151
             I        I  +  + L              F +F LLM   GI MLK R  +   +
Sbjct: 82  AIIGVTTIRYFIIPILPNTLFFYNNITFTRRMAMFGLFALLMFPAGIAMLKTRKEVNVNK 141

Query: 152 KFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFP 209
           K   NY   +  G+  G L+G +G GGG      L++     +  A ATS     +IA  
Sbjct: 142 KVKYNYPLILIEGLFVGALTGLIGAGGGFLIIPALVILAKVKMKVAIATSL---IIIAAK 198

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           +LL                   VN   +++   IS++   L + LS  +  K L  GF  
Sbjct: 199 SLLGFFLGDAITMN--------VNWSFLILFTTISLIGIFLGSYLSNFVDGKKLKKGFGY 250

Query: 270 IMFTTSF 276
            +F  + 
Sbjct: 251 FIFLMAI 257


>gi|323494951|ref|ZP_08100042.1| hypothetical protein VIBR0546_21025 [Vibrio brasiliensis LMG 20546]
 gi|323310746|gb|EGA63919.1| hypothetical protein VIBR0546_21025 [Vibrio brasiliensis LMG 20546]
          Length = 259

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 87/253 (34%), Gaps = 28/253 (11%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G +  + G GGG++ VP L            +  H+A+GT+       S  +   + R  
Sbjct: 20  GFIDAVAG-GGGMLTVPALLSL--------GLPPHIALGTNKLAATFASSTAAFTYYRKR 70

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-MLKRDRLYCERK 152
               +  K   F      ++ +L +  +   +L K   +  L   I  +  +       +
Sbjct: 71  LFKPRCWKRAFFATLTGAILGTLFVDLISTEWLEKILPLVILAAAIYTIWHKTPSTVNNE 130

Query: 153 FPD-----NYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATSAGVSALI 206
            P      N  +Y  G+  GF  G  G G G F T   M  Y  +I  A+  +  ++   
Sbjct: 131 TPQPCPVLNKKQYAQGLTLGFYDGVAGPGTGAFWTVSSMALYRLNILLASGLAKAMNFTS 190

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
            F +L+                LG ++    L +    +    +    +   G K++   
Sbjct: 191 NFTSLVTFAV------------LGHIDWVLGLTMGLCLMAGAFVGAHSAIRFGAKFIRPV 238

Query: 267 FSMIMFTTSFVFA 279
           F  ++   +   A
Sbjct: 239 FVTVVSILAVKLA 251


>gi|228906677|ref|ZP_04070551.1| integral membrane protein [Bacillus thuringiensis IBL 200]
 gi|228852989|gb|EEM97769.1| integral membrane protein [Bacillus thuringiensis IBL 200]
          Length = 255

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K     + +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEILKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVK--YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V     +    GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFVFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 179 AGNAKLLNLGSNVGALLMFMYVG 201



 Score = 35.8 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 51/120 (42%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   ++P++ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEILKPLMLIMLGAVAIY 118


>gi|107101256|ref|ZP_01365174.1| hypothetical protein PaerPA_01002289 [Pseudomonas aeruginosa PACS2]
          Length = 259

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 97/263 (36%), Gaps = 25/263 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ V +FL+G +  + G GGGL+ +P L  A    G+      H+A+GT+      
Sbjct: 10  STLIILAVVAFLAGFIDAIAG-GGGLLTIPALLTA----GVPP----HLALGTNKLSSTF 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     R    +    ++ +    I   + +     +   +LN+   +     G+ 
Sbjct: 61  GAATASYTFYRRKLFHPGKWRNALLATAIGAAIGAWAAHLLPAEWLNRMLPVVVFTCGLY 120

Query: 141 MLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
           ML                   ++  G+V GF  G  G G G F T   +L Y   + +A+
Sbjct: 121 MLFGGTPKAPLDADAPVGRKRQWPQGLVLGFYDGVAGPGTGAFWTVSSLLMYPLDLVRAS 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++ +    AL V + SG             V     L +    ++      + + 
Sbjct: 181 GVARSMNFVSNIVALAVFVASGQ------------VIWLLGLCMGASLMVGAYFGARTAI 228

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G K++   F +++   +   A
Sbjct: 229 GGGAKFIRPVFILVVLALTARLA 251


>gi|188996694|ref|YP_001930945.1| protein of unknown function DUF81 [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931761|gb|ACD66391.1| protein of unknown function DUF81 [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 342

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 93/249 (37%), Gaps = 41/249 (16%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
               MGI   +     +GTS+  +   S+  F+ + + G ++ K+ K  +    I   + 
Sbjct: 42  ILIKMGIPSVVV----VGTSISQMIGASLSGFLNYLKAGKVDTKMGKYVVIYGVIGGFIG 97

Query: 115 SLMISHVDK-----SFLNKAFAIFCLLMGILML---KRDRLYCERKFP------------ 154
            L+I+++ +      F+   + ++  L+G  +     +++   E K P            
Sbjct: 98  VLLINYLKQSGDVKRFILLVYTVYLFLLGSFIFYESFKNKEKHEHKAPEFIKNLPLKKDF 157

Query: 155 -----DNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAF 208
                   V    G+++GFL+  +G+GGG      LM   G  +  A A S      I  
Sbjct: 158 NVGQVSLIVPAGIGLLSGFLAAVMGIGGGNLVVPALMYLAGYDVVSAIAISVFQMVFITS 217

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
               +  Y   G           V+I   LI+L  S       + L   I + YL +  +
Sbjct: 218 FLSFLHSYFNHG-----------VDIILGLILLIGSSFGAVFGSILGQKINRFYLKVFLA 266

Query: 269 MIMFTTSFV 277
           ++M   +  
Sbjct: 267 VLMLIVAAY 275



 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 8/116 (6%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-TSVMSFME 88
             LSG L+ + G+GGG ++VP L        +        A+  S+  +   TS +SF+ 
Sbjct: 171 GLLSGFLAAVMGIGGGNLVVPALMYLAGYDVVS-------AIAISVFQMVFITSFLSFLH 223

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              +  +++ +    +       V  S++   +++ +L    A+  L++    LK+
Sbjct: 224 SYFNHGVDIILGLILLIGSSFGAVFGSILGQKINRFYLKVFLAVLMLIVAAYSLKQ 279


>gi|237756432|ref|ZP_04584972.1| membrane protein [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691413|gb|EEP60481.1| membrane protein [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 333

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 93/247 (37%), Gaps = 41/247 (16%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
               MGI   +     +GTS+  +   S+  F+ + + G ++ K+ K  +    I   + 
Sbjct: 33  ILIKMGIPSVVV----VGTSISQMIGASLSGFLNYLKSGKVDTKMGKYVVVYGVIGGFIG 88

Query: 115 SLMISHVDK-----SFLNKAFAIFCLLMGILML---KRDRLYCERKFP------------ 154
            L+I+++ +      F+   + ++  L+G  +     +++   E K P            
Sbjct: 89  VLLINYLKQSGDVKRFILLVYTVYLFLLGSFIFYESFKNKEKHEHKAPEFIKNLPFKKDF 148

Query: 155 -----DNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAF 208
                   V    G+++GFL+  +G+GGG      LM   G  +  A A S      I  
Sbjct: 149 NVGQVSLIVPAGIGLLSGFLAAVMGIGGGNLVVPALMYLAGYDVVSAIAISVFQMVFITS 208

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
               +  Y   G           V+I   LI+L  S       + L   I + YL +  +
Sbjct: 209 FLSFLHSYFNHG-----------VDIILGLILLVGSSFGAVFGSILGQKIKRFYLKVFLA 257

Query: 269 MIMFTTS 275
           ++M   +
Sbjct: 258 VLMLIVA 264



 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 50/116 (43%), Gaps = 8/116 (6%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-TSVMSFME 88
             LSG L+ + G+GGG ++VP L        +        A+  S+  +   TS +SF+ 
Sbjct: 162 GLLSGFLAAVMGIGGGNLVVPALMYLAGYDVVS-------AIAISVFQMVFITSFLSFLH 214

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              +  +++ +    +       V  S++   + + +L    A+  L++    LK+
Sbjct: 215 SYFNHGVDIILGLILLVGSSFGAVFGSILGQKIKRFYLKVFLAVLMLIVATYSLKQ 270


>gi|73669384|ref|YP_305399.1| hypothetical protein Mbar_A1879 [Methanosarcina barkeri str.
           Fusaro]
 gi|72396546|gb|AAZ70819.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 243

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 93/261 (35%), Gaps = 25/261 (9%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            V + I  I + + L+  +  + G G   +MVPVL     L              T L V
Sbjct: 2   VVYEEIIYIALLTLLASLIGNMAGFGISTIMVPVLLIILPLPQ------------TLLLV 49

Query: 78  IAPTSVMSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                     +       I  K+L  +       + + S +   + +  L++A  +F + 
Sbjct: 50  GIVHWFNDIWKILLFRKGIRWKLLLAFGLPGIFASFLGSSLSLRISREILSRALGVFLIA 109

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
             I ++        +K     V    G +TGF +G  G+GG     + +  +        
Sbjct: 110 YVIFIIFNRTFKLSQKLS---VAISSGTLTGFFAGIFGIGG-EINAVTLSAFNLEKAVYV 165

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           AT+  ++ +I    ++  I  G  L+         + I   LI +PIS++   +  +   
Sbjct: 166 ATAGAIAFMIDSTRIVTYILGGTRLDP--------ILISGFLIFIPISLIGAMIGKREIE 217

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            I ++      ++ +F     
Sbjct: 218 KIPQEKFRTFVAVFIFLFGLK 238


>gi|241760320|ref|ZP_04758415.1| hypothetical protein NEIFL0001_1630 [Neisseria flavescens SK114]
 gi|241319198|gb|EER55676.1| hypothetical protein NEIFL0001_1630 [Neisseria flavescens SK114]
          Length = 256

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 92/265 (34%), Gaps = 24/265 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +   +++  F +G +  + G GGGL+ +P L           S+       +  G +  
Sbjct: 5   SFFYYLVLVGFAAGLMDAVVG-GGGLLQIPGLFNLLPNATPVASVMGVNKFASCCGTLTA 63

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T      ++ R   +  K+L     +    + + +  + +    ++  A  +  + M + 
Sbjct: 64  TG-----QYLRRIPVPWKMLLPAAALAFAASYLGAKTVVYFPVQYMKPAMLVIMIAMCLY 118

Query: 141 MLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYK 194
              +  L    +              +G + GF  G  G G G     + + FYG     
Sbjct: 119 TFLKKDLGQTVRTEKLTRRETLWGLFFGALIGFYDGVFGPGTGSLLAFVFVRFYGYDFLA 178

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A A++  +++     AL   I              G V     + +   ++    +  +L
Sbjct: 179 ANASAKVINSTTNLAALTFFIPQ------------GHVVWAWAIPLAVANLCGGVVGARL 226

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVFA 279
           +   G K L  GF +++  T   FA
Sbjct: 227 AIRGGTKLLRYGFMLLLCLTIGKFA 251


>gi|254374258|ref|ZP_04989740.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|151571978|gb|EDN37632.1| conserved hypothetical protein [Francisella novicida GA99-3548]
          Length = 301

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 104/293 (35%), Gaps = 48/293 (16%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           S +  + +  +I + + L G +  + G+GGGLV+ P+L+           + +H A+G S
Sbjct: 22  SMEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVL-------GVPLHYAIGAS 74

Query: 75  LGVIAPTSVM-SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           L  I  TS   S +  + HG    K+         +  +  + +   +    L   F   
Sbjct: 75  LVAIICTSTATSLVSLQSHGLTKEKLGLFLALATAVGAIFGAKLAVMLRAKVLFLIFGGI 134

Query: 134 CLLMGILMLKRDRLYCERKFPD-----NYVKYIWGMVTGF----------LSGALGVGGG 178
            +++ IL   + +   E K P      N ++    +V             + G + + G 
Sbjct: 135 LIIVAILSFIKKKSNAETKPPKQSFIANKLQLNDSVVIAGQKQDYNVNHPILGFIFMAGA 194

Query: 179 IF-------------TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            F                +          + +TS  +  + AF A               
Sbjct: 195 GFIGGLLGIGAGIFKVVAMDKIMKIPFRVSASTSNFIMGVTAFAATSTY----------- 243

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +  G+++      +   ++L   + +KL   I  + L + F +++F ++   
Sbjct: 244 -YFAGYIDSSITAAVALGTLLGATIGSKLMPHIPTRALRLMFFIVVFISAIQM 295



 Score = 42.0 bits (98), Expect = 0.093,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I   V+  TS  ++  T+  +   +   G I+  I         +   + S ++ H+   
Sbjct: 219 IPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSITAAVALGTLLGATIGSKLMPHIPTR 278

Query: 125 FLNKAFAIFCLLMGILMLKR 144
            L   F I   +  I M+ +
Sbjct: 279 ALRLMFFIVVFISAIQMIIK 298



 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 12/143 (8%)

Query: 135 LLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIY 193
           +++ IL L   +   E+      + +I  ++ G +   +G+GGG+    L+    G  ++
Sbjct: 9   VIISILELCIQKFSMEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVLGVPLH 68

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A   S       +    L         +GL    LG       L +   + +      K
Sbjct: 69  YAIGASLVAIICTSTATSL----VSLQSHGLTKEKLG-------LFLALATAVGAIFGAK 117

Query: 254 LSYMIGKKYLTIGFSMIMFTTSF 276
           L+ M+  K L + F  I+   + 
Sbjct: 118 LAVMLRAKVLFLIFGGILIIVAI 140


>gi|149925396|ref|ZP_01913660.1| hypothetical protein LMED105_04212 [Limnobacter sp. MED105]
 gi|149825513|gb|EDM84721.1| hypothetical protein LMED105_04212 [Limnobacter sp. MED105]
          Length = 266

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 86/261 (32%), Gaps = 25/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + VA+F +G +  + G GGGL+ +P L       G          +GT+       +
Sbjct: 10  LVALCVAAFGAGLIDAMVG-GGGLIQIPALFGLMPGQGHATL------LGTNKISSVVGT 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +  ++ +   +    +     +  I     + +++ +    L     +  + + I   
Sbjct: 63  TFAAYKYAKAIQVPWNAVLPATVMALIGAYCGAYIVTQISTEVLRLMLPLLLIAVAIYTF 122

Query: 143 KRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            R  L            + +     G+  GF  G  G G G       ++F+G     AT
Sbjct: 123 LRKDLGSVHAPKLDKNRERFFGACVGLAIGFYDGFFGPGTGSFLMVAFVVFFGFDFLAAT 182

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  V+      +L     +G  +  L             L++   ++    +   L+ 
Sbjct: 183 AGAKMVNIACNLASLAWFAPAGHVIVSLG------------LLMAVFNLAGARVGASLAI 230

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G  ++      ++F     
Sbjct: 231 RKGAGFVRKILLAVVFLLILR 251


>gi|148556646|ref|YP_001264228.1| hypothetical protein Swit_3745 [Sphingomonas wittichii RW1]
 gi|148501836|gb|ABQ70090.1| protein of unknown function DUF81 [Sphingomonas wittichii RW1]
          Length = 262

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 96/262 (36%), Gaps = 25/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L   +  L G   GL G GG ++ VP++     +         HVA+GTS   +A  + 
Sbjct: 9   LLGAGSGSLVGFTLGLVGGGGSILAVPLMVYLVGVA------SPHVAIGTSALAVAANAG 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + H R  TI  +    +           S +    D   L   FA+  +L+G LMLK
Sbjct: 63  ANLVPHARQRTIKWRCAGMFAAAGVAGAYAGSTLGKAFDGQKLLFLFALLMILVGALMLK 122

Query: 144 RD----RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
           +         + +  +      +G  TG  SG  G+GGG      LM   G  +  A  +
Sbjct: 123 KRGDPGNPDVQCRRENAPKVIGYGSATGLFSGFFGIGGGFLIVPGLMASTGMPMRNAVGS 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S          A L   +SG             V+ G   + +   I+       LS+ +
Sbjct: 183 SLVAVTAFGLTAALNYAFSGL------------VDWGLAAVFIGGGIVGGIAGAALSHRL 230

Query: 259 G--KKYLTIGFSMIMFTTSFVF 278
              K  L   F++++F  +   
Sbjct: 231 SGHKGALNTIFALLIFVVAAYM 252



 Score = 35.4 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 62  DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV 121
              + M  A+G+SL  +    + + + +   G ++  +   +I    +  +  + +   +
Sbjct: 171 STGMPMRNAVGSSLVAVTAFGLTAALNYAFSGLVDWGLAAVFIGGGIVGGIAGAALSHRL 230

Query: 122 DKS--FLNKAFAIFCLLMGILMLKRD 145
                 LN  FA+   ++   ML R 
Sbjct: 231 SGHKGALNTIFALLIFVVAAYMLWRS 256


>gi|254234918|ref|ZP_04928241.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254240217|ref|ZP_04933539.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|126166849|gb|EAZ52360.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126193595|gb|EAZ57658.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
          Length = 259

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 96/263 (36%), Gaps = 25/263 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ V +FL+G +  + G GGGL+ +P L  A    G+      H+A+GT+      
Sbjct: 10  STLIILAVVAFLAGFIDAIAG-GGGLLTIPALLTA----GVPP----HLALGTNKLSSTF 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     R    +    ++ +    I   + +     +   +LN+   +     G+ 
Sbjct: 61  GAATASYTFYRRKLFHPGKWRNGLLATTIGAAIGAWAAHLLPAEWLNRMLPVVVFTCGLY 120

Query: 141 MLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
           ML                   ++  G+  GF  G  G G G F T   +L Y   + +A+
Sbjct: 121 MLFGGTPKAPLDADAPLGRKRQWPQGLALGFYDGVAGPGTGAFWTVSSLLMYPLDLVRAS 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++ +    AL V I SG             V     L +    ++      + + 
Sbjct: 181 GVARSMNFVSNIVALAVFIASGQ------------VIWLLGLCMGASLMVGAYFGARTAI 228

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G K++   F +++   +   A
Sbjct: 229 GGGAKFIRPVFILVVLALTARLA 251


>gi|56708059|ref|YP_169955.1| hypothetical protein FTT_0965c [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670530|ref|YP_667087.1| hypothetical protein FTF0965c [Francisella tularensis subsp.
           tularensis FSC198]
 gi|254370546|ref|ZP_04986551.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874862|ref|ZP_05247572.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56604551|emb|CAG45598.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110320863|emb|CAL08981.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. tularensis FSC198]
 gi|151568789|gb|EDN34443.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840861|gb|EET19297.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 301

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 104/293 (35%), Gaps = 48/293 (16%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           S +  + +  +I + + L G +  + G+GGGLV+ P+L+           + +H A+G S
Sbjct: 22  SMEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVL-------GVPLHYAIGAS 74

Query: 75  LGVIAPTSVM-SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           L  I  TS   S +  + HG    K+         +  +  + +   +    L   F   
Sbjct: 75  LVAIICTSTATSLVSLQSHGLTKEKLGLFLALATAVGAIFGAKLAVMLRAKVLFLIFGGI 134

Query: 134 CLLMGILMLKRDRLYCERKFPD-----NYVKYIWGMVTGF----------LSGALGVGGG 178
            +++ IL   + +   E K P      N ++    +V             + G + + G 
Sbjct: 135 LIVVAILSFIKKKSNAETKPPKQSFIANKLQLNDSVVIAGQKQDYNVNHPILGFIFMAGA 194

Query: 179 IF-------------TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            F                +          + +TS  +  + AF A               
Sbjct: 195 GFIGGLLGIGAGIFKVVAMDKIMKIPFRVSASTSNFIMGVTAFAATSTY----------- 243

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +  G+++      +   ++L   + +KL   I  K L + F +++F ++   
Sbjct: 244 -YFAGYIDSSITAAVALGTLLGATIGSKLMPHIPTKALRLMFFIVVFISAIQM 295



 Score = 42.0 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I   V+  TS  ++  T+  +   +   G I+  I         +   + S ++ H+   
Sbjct: 219 IPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSITAAVALGTLLGATIGSKLMPHIPTK 278

Query: 125 FLNKAFAIFCLLMGILMLKR 144
            L   F I   +  I M+ +
Sbjct: 279 ALRLMFFIVVFISAIQMIIK 298



 Score = 40.8 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 12/143 (8%)

Query: 135 LLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIY 193
           +++ IL L   +   E+      + +I  ++ G +   +G+GGG+    L+    G  ++
Sbjct: 9   VIISILELCIQKFSMEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVLGVPLH 68

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A   S       +    L         +GL    LG       L +   + +      K
Sbjct: 69  YAIGASLVAIICTSTATSL----VSLQSHGLTKEKLG-------LFLALATAVGAIFGAK 117

Query: 254 LSYMIGKKYLTIGFSMIMFTTSF 276
           L+ M+  K L + F  I+   + 
Sbjct: 118 LAVMLRAKVLFLIFGGILIVVAI 140


>gi|222094688|ref|YP_002528748.1| hypothetical protein BCQ_1026 [Bacillus cereus Q1]
 gi|221238746|gb|ACM11456.1| conserved hypothetical protein [Bacillus cereus Q1]
          Length = 255

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     +    + I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLVMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNY--VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +  +   +  V GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFVIGFYDGFLGPGTGSFLMFALLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      AL + +Y G
Sbjct: 179 AGTAKFLNLGSNVGALFMFMYVG 201



 Score = 35.4 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLVMLGAVAIY 118


>gi|154174372|ref|YP_001408365.1| inner membrane protein YfcA [Campylobacter curvus 525.92]
 gi|153793085|gb|EAT99958.2| inner membrane protein YfcA [Campylobacter curvus 525.92]
          Length = 253

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 98/258 (37%), Gaps = 25/258 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  VA+FL G +  + G GGGL+ +P +      MG+      H+A+GT+    +  S 
Sbjct: 9   LVFFVAAFLGGFIDSIAG-GGGLITLPAIM----AMGVPP----HLALGTNKLQGSFGSF 59

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + +   + G IN K     I    I   V +++I  ++  FL        + + +  + 
Sbjct: 60  TATLNFAKKGMINFKEAGLGIVFTFIGACVGAVLILFLNPDFLRLVIPFLLIAIFVYTIF 119

Query: 144 RDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATS 199
             ++       +        ++GM+ GF  G  G G G F    M+   G ++ KA A +
Sbjct: 120 MPKVGESDRRARMDKRIFYVVFGMILGFYDGFFGPGAGSFWTFAMIALIGVNMKKAVAHT 179

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             ++      +L V I  G             V     +++    I    + + L     
Sbjct: 180 KLLNFTSNVVSLGVFIIGGQ------------VLWLVGILMGAGQIFGAYIGSNLVIKKE 227

Query: 260 KKYLTIGFSMIMFTTSFV 277
            K++   F  ++  T   
Sbjct: 228 VKFIRAMFLTVVAATILK 245


>gi|325282792|ref|YP_004255333.1| hypothetical protein Deipr_0554 [Deinococcus proteolyticus MRP]
 gi|324314601|gb|ADY25716.1| protein of unknown function DUF81 [Deinococcus proteolyticus MRP]
          Length = 256

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 82/203 (40%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +   +  +FL+G +  + G GGG + +P L            +    A+ T+  +   
Sbjct: 12  EVLLYGLPLAFLAGFIDAVAG-GGGTISLPALFFM--------GLSPVQAVATNKLLAIF 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S  ++ R G ++  +L   + +  I + + + ++  VD         +  L +G L
Sbjct: 63  GSATSTYQYWRGGHLDRDLLLRTVPLALIGSALGAYLVRFVDPDSFRALVGVVILAVGAL 122

Query: 141 MLKRDRLYCERKFPDNYVKYIW-----GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           ++   R   E  +P    + +       +V G   G LG G G F  LL    G ++  +
Sbjct: 123 VIANKRFGLESTYPGLTARTLALALPGVLVIGIYDGFLGPGTGTFLMLLFALTGMNLVSS 182

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
           +  +  V+      AL + + +G
Sbjct: 183 SGNARAVNFATNLGALGLFLAAG 205


>gi|218230960|ref|YP_002365718.1| hypothetical protein BCB4264_A0985 [Bacillus cereus B4264]
 gi|229078257|ref|ZP_04210822.1| integral membrane protein [Bacillus cereus Rock4-2]
 gi|229153732|ref|ZP_04281875.1| integral membrane protein [Bacillus cereus m1550]
 gi|218158917|gb|ACK58909.1| putative membrane protein [Bacillus cereus B4264]
 gi|228629735|gb|EEK86420.1| integral membrane protein [Bacillus cereus m1550]
 gi|228705057|gb|EEL57478.1| integral membrane protein [Bacillus cereus Rock4-2]
          Length = 255

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++I   FL+  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIAFGFLAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K     + +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVK--YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V     +    GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFVFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 179 AGNAKLLNLGSNVGALLMFMYVG 201



 Score = 35.4 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +   +G +  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIAFGFLAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   ++P++ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118


>gi|167010981|ref|ZP_02275912.1| hypothetical protein Ftulh_09780 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254367876|ref|ZP_04983896.1| hypothetical protein FTHG_01169 [Francisella tularensis subsp.
           holarctica 257]
 gi|290953090|ref|ZP_06557711.1| hypothetical protein FtulhU_01384 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295313696|ref|ZP_06804278.1| hypothetical protein FtulhU_01384 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|134253686|gb|EBA52780.1| hypothetical protein FTHG_01169 [Francisella tularensis subsp.
           holarctica 257]
          Length = 301

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 54/286 (18%), Positives = 104/286 (36%), Gaps = 34/286 (11%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           S +  + +  +I + + L G +  + G+GGGLV+ P+L+           + +H A+G S
Sbjct: 22  SMEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVL-------GVPLHYAIGAS 74

Query: 75  LGVIAPTSVM-SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           L  I  TS   S +  + HG    K+         +  +  + +   +    L   F+  
Sbjct: 75  LVAIICTSTATSLVSLQSHGLTKEKLGLFLALATAVGAIFGAKLAVMLRAKVLFLIFSGI 134

Query: 134 CLLMGILMLKRDRLYCERKFPD----------NYVKYIWG---------MVTGFLSGALG 174
            +++ IL   + +   E K P           N    I G          + GF+   + 
Sbjct: 135 LIVVAILSFIKKKSNAETKPPKQSFIANKLQLNDSVVIAGQKQDYNVNHPIIGFI--FMA 192

Query: 175 VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP--WSLGFV 232
              G      +L  GA I+K  A    +       A       G          +  G++
Sbjct: 193 ---GAGFIGGLLGIGAGIFKVVAMDKIMKIPFRVSASTSNFIMGVTAFAATSTYYFAGYI 249

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +      +   ++L   + +KL   I  K L + F +++F ++   
Sbjct: 250 DSSITAAVALGTLLGATIGSKLMPHIPTKALRLMFFIVVFISAIQM 295



 Score = 42.0 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I   V+  TS  ++  T+  +   +   G I+  I         +   + S ++ H+   
Sbjct: 219 IPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSITAAVALGTLLGATIGSKLMPHIPTK 278

Query: 125 FLNKAFAIFCLLMGILMLKR 144
            L   F I   +  I M+ +
Sbjct: 279 ALRLMFFIVVFISAIQMIIK 298



 Score = 40.8 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 54/143 (37%), Gaps = 12/143 (8%)

Query: 135 LLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIY 193
           +++ IL L   +   E+      + +I  ++ G +   +G+GGG+    L+    G  ++
Sbjct: 9   VIISILELCIQKFSMEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVLGVPLH 68

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A   S       +    L         +GL    LG       L +   + +      K
Sbjct: 69  YAIGASLVAIICTSTATSL----VSLQSHGLTKEKLG-------LFLALATAVGAIFGAK 117

Query: 254 LSYMIGKKYLTIGFSMIMFTTSF 276
           L+ M+  K L + FS I+   + 
Sbjct: 118 LAVMLRAKVLFLIFSGILIVVAI 140


>gi|146343498|ref|YP_001208546.1| putative permease membrane protein [Bradyrhizobium sp. ORS278]
 gi|146196304|emb|CAL80331.1| putative permease; putative membrane protein [Bradyrhizobium sp.
           ORS278]
          Length = 331

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 99/307 (32%), Gaps = 56/307 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   I L++      G +SG+FG+GGG +M P+L            I   V
Sbjct: 24  MQIYLPIADLPVNIFLLLAMGAAVGFVSGMFGIGGGFLMTPLLIFV--------GITPAV 75

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH--------- 120
           A+ +    IA +S    + + R   I+  +    +    + T +     +          
Sbjct: 76  AVASVSSHIAASSFSGALSYWRRRAIDPALASVLMIGGALGTALGVSTFTLLRSLGQLDL 135

Query: 121 ---VDKSFLNKAFAIFCLLMGILML------------------------KRDRLYCERKF 153
              +    L  +     +  G+  +                         + R    + +
Sbjct: 136 MIALSYVALLSSVGGIMVSEGLRAIMRARGGAVATVRRPGSHVWVHGLPLKMRFKRSKIY 195

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G++ GFL   +G+GGG     L+++           TS  ++      A +
Sbjct: 196 VSVIPVIGIGLLIGFLGAVMGIGGGFILVPLLIYLLRVPTSTVIGTSMVLTLATMMIATM 255

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           +   S   ++ +             LI++   +       +   MI  + L +   +++ 
Sbjct: 256 LHAMSNHLVDAVLA-----------LILMIGGVTGAQFGARAGQMIRGEQLRLLLGLLIL 304

Query: 273 TTSFVFA 279
                FA
Sbjct: 305 AVGIRFA 311


>gi|170727427|ref|YP_001761453.1| hypothetical protein Swoo_3087 [Shewanella woodyi ATCC 51908]
 gi|169812774|gb|ACA87358.1| protein of unknown function DUF81 [Shewanella woodyi ATCC 51908]
          Length = 256

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 96/263 (36%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++     ++G +  + G GGGL+ +P L            I  H+A+GT+       S 
Sbjct: 11  AILAGIGLIAGFIDAVAG-GGGLLSIPALLTL--------GISPHLALGTNKLAACFGSS 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+   + R    +  +         +  V  + ++ ++DK +L K   +  + + I  L 
Sbjct: 62  MAAFTYYRQNLFSPTLWYQTFIATFLGAVSGTFLVYYIDKEWLEKGLPLIIIAIAIYTLV 121

Query: 144 RDRLY------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
           +            +K      +++     GF  G  G G G F T     +Y   +  + 
Sbjct: 122 KPNAMGCKDYVPLKKSASGLKQWLLAFPLGFYDGFAGPGAGAFWTISSTNYYRQPLLYSC 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++ +    +L +               LG VN+   L +    +L + +  + + 
Sbjct: 182 GLARAMTFVSNLTSLAIFFI------------LGQVNLILGLSMGICMMLGSFIGARSAI 229

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G +++   F +I+   +   A
Sbjct: 230 KFGVQFIRPVFIIIVLIIAVKLA 252


>gi|15597021|ref|NP_250515.1| hypothetical protein PA1824 [Pseudomonas aeruginosa PAO1]
 gi|218892222|ref|YP_002441089.1| putative membrain protein [Pseudomonas aeruginosa LESB58]
 gi|9947809|gb|AAG05213.1|AE004608_12 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|218772448|emb|CAW28230.1| putative membrain protein [Pseudomonas aeruginosa LESB58]
          Length = 259

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 96/263 (36%), Gaps = 25/263 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ V +FL+G +  + G GGGL+ +P L  A    G+      H+A+GT+      
Sbjct: 10  STLIILAVVAFLAGFIDAIAG-GGGLLTIPALLTA----GVPP----HLALGTNKLSSTF 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     R    +    ++ +    I   + +     +   +LN+   +     G+ 
Sbjct: 61  GAATASYTFYRRKLFHPGKWRNGLLATAIGAAIGAWAAHLLPAEWLNRMLPVVVFTCGLY 120

Query: 141 MLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
           ML                   ++  G+  GF  G  G G G F T   +L Y   + +A+
Sbjct: 121 MLFGGTPKAPLDADAPLGRKRQWPQGLALGFYDGVAGPGTGAFWTVSSLLMYPLDLVRAS 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++ +    AL V I SG             V     L +    ++      + + 
Sbjct: 181 GVARSMNFVSNIVALAVFIASGQ------------VIWLLGLCMGASLMVGAYFGARTAI 228

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G K++   F +++   +   A
Sbjct: 229 GGGAKFIRPVFILVVLALTARLA 251


>gi|299536158|ref|ZP_07049472.1| hypothetical protein BFZC1_09065 [Lysinibacillus fusiformis ZC1]
 gi|298728433|gb|EFI68994.1| hypothetical protein BFZC1_09065 [Lysinibacillus fusiformis ZC1]
          Length = 256

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 95/259 (36%), Gaps = 26/259 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + L+I   FL+  +  + G GGGL+ +P L            +    A+ T+    A
Sbjct: 7   VHILILLISFGFLAAFVDSVVG-GGGLISLPALLFV--------GLNPAAAVATNKLAGA 57

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+ S +   R G ++++ +  +  +  I ++  +  +  ++ + L     +    +G+
Sbjct: 58  MGSLTSSISFYRSGQLDIRSVLKYFPLAFIGSLCGAWTVHLINPALLKPLMLVMLAAVGV 117

Query: 140 LMLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             + +          +      ++  +     GF  G LG G G F     L  G    K
Sbjct: 118 YTIFKKDWGAVATVKNLSKMHLFLFMLLLFAIGFYDGFLGPGTGSFLIFSFLLIGFDFLK 177

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A   +  ++       + +  Y            LG ++    L++    I    L +++
Sbjct: 178 AAGNAKFLNLASNVAGVCMFAY------------LGQIHYVYGLVMGIAQIGGAMLGSRM 225

Query: 255 SYMIGKKYLTIGFSMIMFT 273
           +   G  ++   F ++  T
Sbjct: 226 AIKKGSGFVRTLFIVVTMT 244


>gi|260598748|ref|YP_003211319.1| hypothetical protein CTU_29560 [Cronobacter turicensis z3032]
 gi|260217925|emb|CBA32520.1| UPF0721 transmembrane protein yfcA [Cronobacter turicensis z3032]
          Length = 242

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 86/219 (39%), Gaps = 24/219 (10%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
              GGGL+ VP L       G+  +     A+ T+       S+ + +   R G ++++ 
Sbjct: 4   LAGGGGLLTVPALL----AAGMSPAQ----ALATNKLQACGGSLSASLYFIRRGVVSLRD 55

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC---ERKFPDN 156
            K  I +  I +   +L++ HV    L +   +  + +G+  L   RL     +R+    
Sbjct: 56  QKLNILMTFIGSTSGALLVQHVQSDILRQILPVLVIAIGLYFLLMPRLGEDDRQRRLYGL 115

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
               + G   GF  G  G G G F  L  +   G ++ K+TA +  ++A      LL+ I
Sbjct: 116 PFALVAGGCVGFYDGFFGPGAGSFYALAFVTLAGFNLAKSTAHAKVLNATSNVGGLLLFI 175

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             G             V  G   ++L    L   L ++L
Sbjct: 176 IGGK------------VIWGTGFVMLAGQFLGARLGSRL 202


>gi|126173862|ref|YP_001050011.1| hypothetical protein Sbal_1628 [Shewanella baltica OS155]
 gi|125997067|gb|ABN61142.1| protein of unknown function DUF81 [Shewanella baltica OS155]
          Length = 257

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 88/263 (33%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ V   ++G +  + G GGGL+ +P L            I  H  +GT+    +  S 
Sbjct: 11  ALLAVIGLIAGFIDAVVG-GGGLLSIPALLTL--------GIAPHTVLGTNKLAASFGSS 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+   + R                 I  V+ S ++  VD  +L K   +  + + I  L 
Sbjct: 62  MAAWTYYRQHLFKPSFWYMAFIATFIGAVLGSFLVYLVDTQWLEKVLPLLIIGIAIYSLV 121

Query: 144 RDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
                           P    +++ G+  G   G  G G G F T      Y   +  + 
Sbjct: 122 SPNAISDVNCQAPTSKPPAKQQWLQGLALGTYDGFAGPGIGAFWTVTSGSLYKLPLLHSC 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++      AL +  +            LG V     L +    +L + +  + + 
Sbjct: 182 GLARAMTFTSNLTALTIFGW------------LGQVEWHIGLWMGLCMMLGSFIGARCAI 229

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F +I+   +   A
Sbjct: 230 KFGMPFIRPLFILIVLMIAANLA 252


>gi|303248908|ref|ZP_07335156.1| protein of unknown function DUF81 [Desulfovibrio fructosovorans JJ]
 gi|302489707|gb|EFL49642.1| protein of unknown function DUF81 [Desulfovibrio fructosovorans JJ]
          Length = 312

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 92/282 (32%), Gaps = 59/282 (20%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG +M P+L     +MGI  +    VA  +    I   S    + H R G ++
Sbjct: 32  SGIFGVGGGFLMTPLLM----MMGIPPT----VAAASDSNQIVGASTSGTLIHLRLGNVD 83

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFCLLMGILML--------K 143
           +K+    +    +   +   +I  +         ++  + +    +G  M         K
Sbjct: 84  VKMGLLLLIGGVVGGTLGVQLIKVLRAMGNADFLISITYVLMLGSVGSYMFIESITSMRK 143

Query: 144 RDRLYCERKFPDNY--------------------------VKYIWGMVTGFLSGALGVGG 177
                 +   P                             +    G + G LS  +GVGG
Sbjct: 144 AKNPSQKPAAPKKPSGYARMMASLPFQMEFPRSGVRMSLIMPLFLGGLVGVLSAIMGVGG 203

Query: 178 GIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G     +M++     ++    TS            +++ ++              V+   
Sbjct: 204 GFIMVPVMVYMLRMPMHVVVGTSLFQVLFTCLNVTIMQAWTNHT-----------VDFVL 252

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            LI+L  S L   +  ++   +    L +  + I+    F  
Sbjct: 253 ALILLIGSALGAQIGARIGRKLKGDQLKVYLAGIVLLVMFKM 294



 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 9/134 (6%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M F      +  I  + +   + G LS + GVGGG +MVPV+    +       + MHV 
Sbjct: 171 MEFPRSGVRMSLIMPLFLGGLV-GVLSAIMGVGGGFIMVPVMVYMLR-------MPMHVV 222

Query: 71  MGTSLGVIAPTSV-MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           +GTSL  +  T + ++ M+   + T++  +    +    +   + + +   +    L   
Sbjct: 223 VGTSLFQVLFTCLNVTIMQAWTNHTVDFVLALILLIGSALGAQIGARIGRKLKGDQLKVY 282

Query: 130 FAIFCLLMGILMLK 143
            A   LL+   ML 
Sbjct: 283 LAGIVLLVMFKMLY 296


>gi|296445368|ref|ZP_06887326.1| protein of unknown function DUF81 [Methylosinus trichosporium OB3b]
 gi|296257129|gb|EFH04198.1| protein of unknown function DUF81 [Methylosinus trichosporium OB3b]
          Length = 261

 Score = 63.9 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 87/250 (34%), Gaps = 24/250 (9%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +V Y+        + G   GL G GG ++ VP+L     +         HVA+GTS   
Sbjct: 4   ELVQYVIAAACGGGI-GFTLGLIGGGGSVLAVPLLVYVVGVTDP------HVAIGTSAFA 56

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +A  +  S + H R G++  +    +     I   V S +    D   L   F+   +L 
Sbjct: 57  VAVNAAFSLVNHARAGSVKWRCGGMYAAAGTIGAAVGSTLGKSFDGQKLLFLFSFVMILT 116

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-----YGASI 192
           G+LML+      +      +        TGF++G      GI   +L++       G  +
Sbjct: 117 GVLMLRGRGKSGDAAVECTFEHAPKVGATGFVTGLFSGFFGIGGGVLVVPGLVGSTGMPM 176

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A  TS     +           SG             V+    L+++    + T    
Sbjct: 177 INAVGTSLVAVTIFGLTTAFNYAASGL------------VDWFLALVLIGSGGVGTLFGV 224

Query: 253 KLSYMIGKKY 262
             +  + KK 
Sbjct: 225 ATARRMSKKT 234


>gi|288934211|ref|YP_003438270.1| hypothetical protein Kvar_1332 [Klebsiella variicola At-22]
 gi|288888940|gb|ADC57258.1| protein of unknown function DUF81 [Klebsiella variicola At-22]
          Length = 269

 Score = 63.9 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 97/236 (41%), Gaps = 25/236 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++   + L+G +  L G GGGL+ VP L       G+  +     A+ T+       S
Sbjct: 15  LVVLFFVAILAGFIDSLAG-GGGLLTVPALM----AAGMPPAQ----ALATNKLQACGGS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + +   R   +++   K  I +  I +   +L++ HV  + L +   +  + +G+  L
Sbjct: 66  LSATLYFVRRKVVSLADQKLNILMTFIGSTAGALLVQHVQSNILKQILPLLVIGIGLYFL 125

Query: 143 KRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
              +L     +R+        + G   GF  G  G G G F  L  +   G ++ K+TA 
Sbjct: 126 LMPKLGEADRQRRLYGLPFALVAGGSVGFYDGFFGPGAGSFYALAFVTLAGFNLAKSTAH 185

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           +  ++A      LL+ I  G  +     W+ GFV       ++    +     ++L
Sbjct: 186 AKLLNATSNVGGLLLFIIGGKVI-----WATGFV-------MMAGQFIGARAGSRL 229


>gi|219666307|ref|YP_002456742.1| hypothetical protein Dhaf_0238 [Desulfitobacterium hafniense DCB-2]
 gi|219536567|gb|ACL18306.1| protein of unknown function DUF81 [Desulfitobacterium hafniense
           DCB-2]
          Length = 258

 Score = 63.9 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 93/232 (40%), Gaps = 14/232 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++M+P++    +       I  H+A GTSL  +  T +   + +   G+I +        
Sbjct: 26  IIMIPLMVGLLK-------INQHMAHGTSLVGVVFTGISGAITYSLSGSIELVPALLLAS 78

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
              IT  + +   + + +  L ++F  F + + I+ L +  L         ++K I  + 
Sbjct: 79  TAMITARLGARYATSLPEWKLKRSFGYFLIFVTIVFLLKPYLGEFSLSSTVWIKTIILLG 138

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            G  +       G  + ++ +  G+ +  A    AG+   +A    L+ +     +    
Sbjct: 139 IGAFA-------GFLSGMMGVGGGSIMVPAMVIFAGMGQQVAQGISLLAMIPASAIGAFT 191

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               G V+   +  ++   +  T L   L++++ +  L I F++++  T+  
Sbjct: 192 HNRNGNVHTKILPGLVVGILPGTFLGGSLAHILPEVALRIIFAIVVVYTAIK 243



 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 7/132 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++     +G LSG+ GVGGG +MVP +   F  MG        VA G SL  + P S 
Sbjct: 134 IILLGIGAFAGFLSGMMGVGGGSIMVPAMV-IFAGMG------QQVAQGISLLAMIPASA 186

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +    H R+G ++ KIL   +  +   T +   +   + +  L   FAI  +   I  ++
Sbjct: 187 IGAFTHNRNGNVHTKILPGLVVGILPGTFLGGSLAHILPEVALRIIFAIVVVYTAIKNIR 246

Query: 144 RDRLYCERKFPD 155
             +     +   
Sbjct: 247 AKKPETAVEPST 258



 Score = 43.5 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 31/100 (31%), Gaps = 12/100 (12%)

Query: 179 IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
           I   L++     + + A  TS            +    SG             + +   L
Sbjct: 27  IMIPLMVGLLKINQHMAHGTSLVGVVFTGISGAITYSLSGS------------IELVPAL 74

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++   +++   L  + +  + +  L   F   +   + VF
Sbjct: 75  LLASTAMITARLGARYATSLPEWKLKRSFGYFLIFVTIVF 114


>gi|114048031|ref|YP_738581.1| hypothetical protein Shewmr7_2539 [Shewanella sp. MR-7]
 gi|113889473|gb|ABI43524.1| protein of unknown function DUF81 [Shewanella sp. MR-7]
          Length = 257

 Score = 63.9 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 95/263 (36%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ V   ++G +  + G GGGL+ +P L       GI      H A+GT+    +  S 
Sbjct: 11  ALLAVIGLIAGFIDAVVG-GGGLLSIPALLTL----GIPP----HTALGTNKFAASFGSS 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+   + R   +             I  V+ S+++  ++  +L KA  +  + + I  L 
Sbjct: 62  MAAWTYYRQHLLKPSFWYMAFIATFIGAVLGSVLVYLLNAQWLEKALPLLIIGIAIYSLL 121

Query: 144 RDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
                         K      + + G++ G   G  G G G F T      Y   +  + 
Sbjct: 122 SPNAISDTDCQAPIKAQSKLKQSLQGLLLGGYDGFAGPGIGAFWTVSSGALYKLPLLHSC 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++      AL +               LG V+    L +    +L + +  + + 
Sbjct: 182 ALARAMTFTSNLTALAIF------------GFLGQVHWQIGLWMGLCMMLGSFIGARCAI 229

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F +I+ + +   A
Sbjct: 230 KFGMPFIRPLFILIVLSIAANLA 252


>gi|330982187|gb|EGH80290.1| hypothetical protein PSYAP_27124 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 259

 Score = 63.9 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 95/264 (35%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 9   LTTLAILAVVAFIAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    +       +    +   + +++  ++   +LN+   +     G+
Sbjct: 60  FGSATASFTFYRRKLFDPGQWLHAVAGTAVGAALGAVIAHYLPAEWLNQMLPVIVFGCGL 119

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G+  GF  G  G G G F T   +L Y   + KA
Sbjct: 120 YLLFGGTPKAPLESNAPIKKKWQLPQGLGLGFYDGVAGPGTGAFWTVSTLLLYPVDLVKA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V I+SG        + +G       L +    +L        +
Sbjct: 180 SGVARSMNFVSNAVALSVFIFSGQ-----VDYIIG-------LSMGLAVMLGAYFGAGTA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 IKGGAKFIRPVFITVVLGLTVRLA 251


>gi|318041950|ref|ZP_07973906.1| hypothetical protein SCB01_09574 [Synechococcus sp. CB0101]
          Length = 278

 Score = 63.9 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 7/116 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+ +   L G L+G+ GVGGG  +VP L            + M +A GTSL +IA  +++
Sbjct: 135 LLAIQGVLVGLLTGIAGVGGGFAIVPALVLL-------AGLPMQLASGTSLLLIAVNALV 187

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +          ++ ++   +    +  VV   +  H+    L + F+I  +   ++
Sbjct: 188 ALGALGHWPAQSLPLMLPLLAGGVLGAVVGQRLAPHLSDRRLRQGFSILLIGSALM 243



 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 90/240 (37%), Gaps = 21/240 (8%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
            G GG ++++P+L           ++    A+  SL V+   ++ +   + R G   ++ 
Sbjct: 23  LGAGGSILLLPLLVS-------GAALPTREAVPLSLLVVMLLALANLGPYVRRGQFALRP 75

Query: 100 LKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV 158
                      + +    + + +    +         L+   +L  +            +
Sbjct: 76  ALILGVPALAGSWLGGNWVKAGLIAESVQLGVFTAAALVASWLLTSNTSQTSTHKARPGL 135

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYS 217
             I G++ G L+G  GVGGG      ++   G  +  A+ TS     LIA  AL+     
Sbjct: 136 LAIQGVLVGLLTGIAGVGGGFAIVPALVLLAGLPMQLASGTSL---LLIAVNALVALGAL 192

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G              ++  +L +L   +L   +  +L+  +  + L  GFS+++  ++ +
Sbjct: 193 GHWPAQ---------SLPLMLPLLAGGVLGAVVGQRLAPHLSDRRLRQGFSILLIGSALM 243


>gi|262341058|ref|YP_003283913.1| hypothetical protein BLBBGE_282 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272395|gb|ACY40303.1| hypothetical protein BLBBGE_282 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 282

 Score = 63.9 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 91/272 (33%), Gaps = 25/272 (9%)

Query: 9   SLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMH 68
           S+      D +      ++   F +  + G  G+G GL      +     +GI       
Sbjct: 21  SIFYQKILDHLNQSFLYLMFTGFFAQLVDGAIGMGYGL----TCTTILLSLGIPLPSI-- 74

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD---KSF 125
               +       +S +S   H + G +N K+ K  +    + +++ + ++S        +
Sbjct: 75  --SASIHTAEIFSSGISGFSHYKMGNVNKKLFKILLIPGVLGSIIGAFLLSKFGEYYAFY 132

Query: 126 LNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
           +    A +   +G+ +L +      +K          G   GFL   +G G G F    +
Sbjct: 133 IKPMLASYTFFLGVKILLKTWKKDHQKTKKIGWLAGCG---GFLDSFVGGGWGPFVTSTL 189

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           +  G +      + +     + F + L                LG      V  ++   +
Sbjct: 190 ISKGRTPKYVIGSVSLSEFFVTFSSALTFFSL-----------LGINYWKIVFGLVFGGL 238

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              PLA K+S  +  K +     +++   S  
Sbjct: 239 FAAPLAAKISGKLPIKIMCFSIGILVIIWSVR 270


>gi|227540334|ref|ZP_03970383.1| permease [Sphingobacterium spiritivorum ATCC 33300]
 gi|227239870|gb|EEI89885.1| permease [Sphingobacterium spiritivorum ATCC 33300]
          Length = 277

 Score = 63.9 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 87/258 (33%), Gaps = 44/258 (17%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++++P+L+  F        + +  A+G +L     TS  +   + + G  N+++      
Sbjct: 30  VIVIPLLTLYFH-------VDIRYAIGAALLASIATSSGAATAYVKEGITNIRLGMFLEI 82

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR------------------- 146
              +  V+ +L+  +   + +   F +  +    + L++                     
Sbjct: 83  ATTLGAVIGALVAIYTPTNTIAVIFGVVLIFSAAMTLRKKNESALTEGSKLAEKLKLNND 142

Query: 147 -----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA 200
                     K  +    +    + G +SG LG+G G    L M          +T TS 
Sbjct: 143 YPVNGKSVSYKLTNVAGGFSIMTLAGVISGLLGIGSGALKVLAMDGAMRIPFKVSTTTSN 202

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  + A  + +V +  G+   G+               ++   +      +KL   I  
Sbjct: 203 FMIGVTAAASAVVYLQRGYMDPGI------------AFPVILGVLAGAFTGSKLLTRINP 250

Query: 261 KYLTIGFSMIMFTTSFVF 278
           K L I F++ +   +   
Sbjct: 251 KVLRIIFAVAITLVAIEM 268



 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+G +SGL G+G G + V         M     I   V+  TS  +I  T+  S + + +
Sbjct: 166 LAGVISGLLGIGSGALKV-------LAMDGAMRIPFKVSTTTSNFMIGVTAAASAVVYLQ 218

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G ++  I    I  +       S +++ ++   L   FA+   L+ I M+  
Sbjct: 219 RGYMDPGIAFPVILGVLAGAFTGSKLLTRINPKVLRIIFAVAITLVAIEMIYN 271


>gi|154148852|ref|YP_001406302.1| inner membrane protein YfcA [Campylobacter hominis ATCC BAA-381]
 gi|153804861|gb|ABS51868.1| inner membrane protein YfcA [Campylobacter hominis ATCC BAA-381]
          Length = 254

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 87/239 (36%), Gaps = 24/239 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +P L  A         I  H A+ T+       +  +     + G +N   +  
Sbjct: 27  GGGLICLPALLAA--------GIPPHAALATNKLQGVFGTFTAAANFAKKGFVNFSEIWV 78

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL---YCERKFPDNYVK 159
            IF   +  V+ + ++  V+  FLN    +    + I  +    L     + K       
Sbjct: 79  GIFWTFVGAVIGTTLVLFVNAKFLNYIIPVLLFAILIYTIFSPNLGVNEVKAKMSIKVFY 138

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            ++G+V GF  G  G G G F    ++   G  + KA A +  ++ +    +L V +  G
Sbjct: 139 TVFGVVLGFYDGFFGPGTGSFWTFALIGLLGLGMKKAVAHTKVLNFVSNIVSLAVFLVGG 198

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                        +     L +    IL     + L+     K++   F  ++F T+  
Sbjct: 199 Q------------ILWVVGLCMAAGQILGGYFGSNLAIKKDAKFIKAIFLFVVFLTTLK 245


>gi|119357911|ref|YP_912555.1| hypothetical protein Cpha266_2123 [Chlorobium phaeobacteroides DSM
           266]
 gi|119355260|gb|ABL66131.1| protein of unknown function DUF81 [Chlorobium phaeobacteroides DSM
           266]
          Length = 261

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 95/263 (36%), Gaps = 19/263 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              ++ +        +G+ G+GG +++V  L      +    S+ M    G ++ V+  +
Sbjct: 6   LFAVLFLIGLCGSFFAGMLGLGGAIILV-PLLLYLPPLFGLPSLDMKQISGMTIVVVFVS 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+++ M   ++  ++  ++        +++   ++         L   FA       ++M
Sbjct: 65  SLIALMVQHKNRFVSKPLVAAVGITALVSSFAGAVFSKSTSSDMLLAVFACMAGFAAVIM 124

Query: 142 LKRDR-----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKA 195
               +     +  E+   +  +     ++  F+ G +G  G  IF  L+++F       A
Sbjct: 125 FIPRKESGGDIPAEQVTFNIPLAIALALIPAFIGGMVGAPGAYIFAPLIIIFLKVPTKVA 184

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             ++ G++ L +      ++ +      L               +L  ++    +   L+
Sbjct: 185 IGSTLGIAFLASVSGAAGKLLTAQVPYVL------------TFALLLGAVPGARVGAMLT 232

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
             I    L  G +M++   +   
Sbjct: 233 KKIPAAALKKGLAMVIAFAAIRM 255



 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 45/129 (34%), Gaps = 7/129 (5%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  + V   I L I  + +   + G+ G  G  +  P++    +       +   VA+G+
Sbjct: 135 IPAEQVTFNIPLAIALALIPAFIGGMVGAPGAYIFAPLIIIFLK-------VPTKVAIGS 187

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +LG+    SV           +   +    +        V +++   +  + L K  A+ 
Sbjct: 188 TLGIAFLASVSGAAGKLLTAQVPYVLTFALLLGAVPGARVGAMLTKKIPAAALKKGLAMV 247

Query: 134 CLLMGILML 142
                I M 
Sbjct: 248 IAFAAIRMW 256


>gi|89893042|ref|YP_516529.1| hypothetical protein DSY0296 [Desulfitobacterium hafniense Y51]
 gi|89332490|dbj|BAE82085.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 258

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 93/232 (40%), Gaps = 14/232 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++M+P++    +       I  H+A GTSL  +  T +   + +   G+I +        
Sbjct: 26  IIMIPLMVGLLK-------INQHMAHGTSLVGVVFTGISGAITYSLSGSIELVPALLLAS 78

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
              IT  + +   + + +  L ++F  F + + I+ L +  L         ++K I  + 
Sbjct: 79  TAMITARLGARYATSLPEWKLKRSFGYFLIFVTIVFLLKPYLGEFSLSSTVWIKTIILLG 138

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            G  +       G  + ++ +  G+ +  A    AG+   +A    L+ +     +    
Sbjct: 139 IGAFA-------GFLSGMMGVGGGSIMVPAMVIFAGMGQQMAQGISLLAMIPASAIGAFT 191

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               G V+   +  ++   +  T L   L++++ +  L I F++++  T+  
Sbjct: 192 HNRNGNVHTKILPGLVVGILPGTFLGGSLAHILPEVALRIIFAIVVVYTAIK 243



 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 7/127 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++     +G LSG+ GVGGG +MVP +   F  MG        +A G SL  + P S 
Sbjct: 134 IILLGIGAFAGFLSGMMGVGGGSIMVPAMV-IFAGMG------QQMAQGISLLAMIPASA 186

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +    H R+G ++ KIL   +  +   T +   +   + +  L   FAI  +   I  ++
Sbjct: 187 IGAFTHNRNGNVHTKILPGLVVGILPGTFLGGSLAHILPEVALRIIFAIVVVYTAIKNIR 246

Query: 144 RDRLYCE 150
             +    
Sbjct: 247 AKKPETA 253



 Score = 43.5 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 31/100 (31%), Gaps = 12/100 (12%)

Query: 179 IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
           I   L++     + + A  TS            +    SG             + +   L
Sbjct: 27  IMIPLMVGLLKINQHMAHGTSLVGVVFTGISGAITYSLSGS------------IELVPAL 74

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++   +++   L  + +  + +  L   F   +   + VF
Sbjct: 75  LLASTAMITARLGARYATSLPEWKLKRSFGYFLIFVTIVF 114


>gi|228905337|ref|ZP_04069305.1| integral membrane protein [Bacillus thuringiensis IBL 4222]
 gi|228854289|gb|EEM98979.1| integral membrane protein [Bacillus thuringiensis IBL 4222]
          Length = 255

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 79/203 (38%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  FL+  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLIILIVFGFLASFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             V S +   R G +++K       +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GCVTSNIVFYRSGNLDLKSGFRLFPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNY--VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +  +  ++  V GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHFIIFTVFVFVIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 179 AGNAKLLNLGSDIGALLMFMYVG 201


>gi|296535803|ref|ZP_06897964.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Roseomonas
           cervicalis ATCC 49957]
 gi|296263871|gb|EFH10335.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Roseomonas
           cervicalis ATCC 49957]
          Length = 275

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 74/206 (35%), Gaps = 14/206 (6%)

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           T+L +    +  +    RR   I   +L        +T  +  L++  +D      A  I
Sbjct: 79  TALLLNIVAASYATWRLRRAAAIGWGLLLPITLPSLVTAFLGGLLV--LDGPLYFTATGI 136

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA-S 191
             +    LML R +   +          + G   GFLSG  G+GGG+F    ++ +G  S
Sbjct: 137 LLIAAAGLMLFRRKATPDTATVRLLPAMLAGAAAGFLSGVTGIGGGVFLVPQLVLFGWAS 196

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
             +A   SA      +   L   + +G  +        G  ++GA++  +  + +     
Sbjct: 197 AKRAAGISAPFILFNSVLGLAGALIAGQQIAQG----TGLYSVGAIVGAVLGAFIGQRW- 251

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
                 + ++ +    + I+      
Sbjct: 252 ------MSERAIRSILAAILLFAGSR 271


>gi|206967652|ref|ZP_03228608.1| putative membrane protein [Bacillus cereus AH1134]
 gi|206736572|gb|EDZ53719.1| putative membrane protein [Bacillus cereus AH1134]
          Length = 255

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SILIILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I ++V +  +  ++   L     +    + I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSALKLFPITFIGSIVGAWTVHLMNPEVLKPLMLVMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNY--VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +  +   +  V GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFVIGFYDGFLGPGTGSFLMFALLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 179 AGNAKLLNLGSNVGALLMFMYVG 201



 Score = 35.8 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 51/120 (42%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ + L + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSALKLFPITFIGSIVGAWTVHLMNPEVLKPLMLVMLGAVAIY 118


>gi|73662358|ref|YP_301139.1| hypothetical protein SSP1049 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72494873|dbj|BAE18194.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 257

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 99/256 (38%), Gaps = 26/256 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + +II+  FL+  +  + G GGGL+ +P L       G+  S     A+GT+    A
Sbjct: 6   VSIVIIIILLGFLAAFIDAVVG-GGGLISIPALLAV----GMPPST----ALGTNKLASA 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+ S     R G +++KI+      + +  +  + + + +    L     +   ++ I
Sbjct: 57  FGSLTSAFRFLRSGNVDLKIVGKLFPFVFVFAIGGASIATFLPSELLKPVVIVILTIVMI 116

Query: 140 LMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             + +      R F         +  +   + GF  G LG G G F   ++L +G     
Sbjct: 117 YTIMKKDWGNVRTFTKLTFGKAILFALLMCLIGFYDGFLGGGTGSFMLFILLMFGFDFLG 176

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A   +  ++      ALL+ I             LG V+    LI+    I  + +    
Sbjct: 177 AAGNAKVLNFASNLGALLLFI------------CLGQVDYFYGLIMAVSMICGSYVGAMF 224

Query: 255 SYMIGKKYLTIGFSMI 270
           +   G  Y+ + F ++
Sbjct: 225 AIKKGVGYVKVLFIVV 240


>gi|113970806|ref|YP_734599.1| hypothetical protein Shewmr4_2471 [Shewanella sp. MR-4]
 gi|113885490|gb|ABI39542.1| protein of unknown function DUF81 [Shewanella sp. MR-4]
          Length = 257

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 95/263 (36%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ V   ++G +  + G GGGL+ +P L       GI      H A+GT+    +  S 
Sbjct: 11  ALLAVIGLIAGFIDAVVG-GGGLLSIPALLTL----GIPP----HTALGTNKFAASFGSS 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+   + R   +             I  V+ S+++  ++  +L KA  +  + + I  L 
Sbjct: 62  MAAWTYYRQHLLKPSFWYMAFIATFIGAVLGSVLVYLLNAQWLEKALPLLIIGIAIYSLL 121

Query: 144 RDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
                         K      + + G++ G   G  G G G F T      Y   +  + 
Sbjct: 122 SPNAISDTDCQAPTKAQSKLKQSLQGLLLGGYDGFAGPGIGAFWTVSSGALYKLPLLHSC 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++      AL +               LG V+    L +    +L + +  + + 
Sbjct: 182 ALARAMTFTSNLTALAIF------------GFLGQVHWQIGLWMGLSMMLGSFIGARCAI 229

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F +I+ + +   A
Sbjct: 230 KFGMPFIRPLFILIVLSIAANLA 252


>gi|87121386|ref|ZP_01077275.1| hypothetical protein MED121_21180 [Marinomonas sp. MED121]
 gi|86163229|gb|EAQ64505.1| hypothetical protein MED121_21180 [Marinomonas sp. MED121]
          Length = 254

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 49/269 (18%), Positives = 98/269 (36%), Gaps = 33/269 (12%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
               I+A    G   G+ GVGGG +M P+L     + G   +    +A+GT L       
Sbjct: 3   FIWYILAGVGVGFAVGMTGVGGGSLMTPLLL----MFGFPAN----IAIGTDLMYAGIAK 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLM 137
               + H +HG +N KI+          +++T   +S         S L     +  +  
Sbjct: 55  STGVVMHAKHGHVNWKIMGSMAAGSIPASLLTIWGLSKFHAPENYQSILTSTLGVMLVAT 114

Query: 138 GILMLKRDRLYCE------RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
            ++++ + ++         +    +   ++ G++ G L     VG G     LM+    +
Sbjct: 115 ALVIIFKKKIVNPNNAQRLKPQRSHTYIFLSGIILGSLVTLTSVGAGALGTALMMILFPT 174

Query: 192 I--YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
           +       T    +  + F            + GL   +LG V+   ++ +L  SI    
Sbjct: 175 MTARNIVGTDLAHAVPLTF------------VAGLGHLALGNVDYSLLVALLIGSIPTIY 222

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           + TK++  +  K L    +  +      +
Sbjct: 223 IGTKVATRVPNKVLQPILASALMAFGLKY 251



 Score = 38.1 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I ++  + G+L  L  VG G +   ++   F       ++     +GT L    P + 
Sbjct: 140 TYIFLSGIILGSLVTLTSVGAGALGTALMMILF------PTMTARNIVGTDLAHAVPLTF 193

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G ++  +L   +     T  + + + + V    L    A   +  G+  L 
Sbjct: 194 VAGLGHLALGNVDYSLLVALLIGSIPTIYIGTKVATRVPNKVLQPILASALMAFGLKYLF 253


>gi|208779231|ref|ZP_03246577.1| conserved hypothetical membrane protein [Francisella novicida FTG]
 gi|254372798|ref|ZP_04988287.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151570525|gb|EDN36179.1| conserved hypothetical protein [Francisella novicida GA99-3549]
 gi|208745031|gb|EDZ91329.1| conserved hypothetical membrane protein [Francisella novicida FTG]
          Length = 301

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 104/293 (35%), Gaps = 48/293 (16%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           S +  + +  +I + + L G +  + G+GGGLV+ P+L+           + +H A+G S
Sbjct: 22  SMEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVL-------GVPLHYAIGAS 74

Query: 75  LGVIAPTSVM-SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           L  I  TS   S +  + HG    K+         +  +  + +   +    L   F   
Sbjct: 75  LVAIICTSTATSLVSLQSHGLTKEKLGLFLALATAVGAIFGAKLAVMLRAKVLFLIFGGI 134

Query: 134 CLLMGILMLKRDRLYCERKFPD-----NYVKYIWGMVTGF----------LSGALGVGGG 178
            +++ IL   + +   E K P      N ++    +V             + G + + G 
Sbjct: 135 LIVVAILSFIKKKSNAETKPPKQSFIANKLQLNDSVVIAGQKQDYNVNHPILGFIFMAGA 194

Query: 179 IF-------------TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            F                +          + +TS  +  + AF A               
Sbjct: 195 GFIGGLLGIGAGIFKVVAMDKIMKIPFRVSASTSNFIMGVTAFAATSTY----------- 243

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +  G+++      +   ++L   + +KL   I  K L + F +++F ++   
Sbjct: 244 -YFAGYIDSSITAAVALGTLLGATIGSKLMPHIPTKALRLMFFIVVFISAIQM 295



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I   V+  TS  ++  T+  +   +   G I+  I         +   + S ++ H+   
Sbjct: 219 IPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSITAAVALGTLLGATIGSKLMPHIPTK 278

Query: 125 FLNKAFAIFCLLMGILMLKR 144
            L   F I   +  I M+ +
Sbjct: 279 ALRLMFFIVVFISAIQMIIK 298



 Score = 41.2 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 12/143 (8%)

Query: 135 LLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIY 193
           +++ IL L   +   E+      + +I  ++ G +   +G+GGG+    L+    G  ++
Sbjct: 9   VIISILELSIQKFSMEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVLGVPLH 68

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A   S       +    L         +GL    LG       L +   + +      K
Sbjct: 69  YAIGASLVAIICTSTATSL----VSLQSHGLTKEKLG-------LFLALATAVGAIFGAK 117

Query: 254 LSYMIGKKYLTIGFSMIMFTTSF 276
           L+ M+  K L + F  I+   + 
Sbjct: 118 LAVMLRAKVLFLIFGGILIVVAI 140


>gi|89068109|ref|ZP_01155526.1| membrane protein [Oceanicola granulosus HTCC2516]
 gi|89046348|gb|EAR52405.1| membrane protein [Oceanicola granulosus HTCC2516]
          Length = 305

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 58/303 (19%), Positives = 112/303 (36%), Gaps = 54/303 (17%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    V     L++    + G LSGLFGVGGG ++ P+L       GI  +    V
Sbjct: 1   MQIYLPIAEVSVNAFLLLGIGGIVGILSGLFGVGGGFLITPMLFFV----GIPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ TS   I   SV + + H R  T+++K+    +    + + +  L+ +++        
Sbjct: 53  AVATSANQIVAASVSAVLAHFRRRTVDLKMGTVLLAGGLVGSALGVLLFNYLRGLGQIDL 112

Query: 125 FLNKAFAIFCLLMGILML-----------------KRDRLYCERKFP------------D 155
           F++  + IF  ++G LM                  +R R       P             
Sbjct: 113 FVSLCYVIFLGIVGGLMFMESLSALRRASRPGTVPRRRRHGLAHSLPLKVRFRVSGLYIS 172

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVR 214
                + G+  G LS  +GVGGG      M++           TS      +     L+ 
Sbjct: 173 VIPPILIGLSVGVLSAIMGVGGGFIMVPAMIYLLHMPTKVVVGTSLFQIIFVTAFTTLLH 232

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
             +              V++   +I++   ++   L +++   +  + L I  + ++   
Sbjct: 233 ATTNHT-----------VDMALAVILILGGVVGAQLGSRIGARMRAEQLRILLAGLVLAV 281

Query: 275 SFV 277
            F 
Sbjct: 282 CFK 284



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 8/116 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+     G LS + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 177 ILIGLSVGVLSAIMGVGGGFIMVPAMIYLLH-------MPTKVVVGTSLFQIIFVTAFTT 229

Query: 87  MEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + H      ++M +    I    +   + S + + +    L    A   L +   +
Sbjct: 230 LLHATTNHTVDMALAVILILGGVVGAQLGSRIGARMRAEQLRILLAGLVLAVCFKL 285


>gi|229154623|ref|ZP_04282740.1| integral membrane protein [Bacillus cereus ATCC 4342]
 gi|228629021|gb|EEK85731.1| integral membrane protein [Bacillus cereus ATCC 4342]
          Length = 255

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNY--VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +  +   +  V GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFVIGFYDGFLGPGTGSFLMFALLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      AL + +Y G
Sbjct: 179 AGTAKFLNLGSNVGALFMFMYVG 201


>gi|269839652|ref|YP_003324344.1| hypothetical protein Tter_2634 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269791382|gb|ACZ43522.1| protein of unknown function DUF81 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 301

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 87/261 (33%), Gaps = 23/261 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++ +    +  + G  G+  G+    +L  A         I    A  +       T+
Sbjct: 4   LLILAIVGLAAQLVDGSLGMAYGVTSTTLLVLA--------GIAPAFASASVHLAEVGTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++S + H + G ++   +        +     ++++S V         A+F  L+G  +L
Sbjct: 56  LVSGLSHWKLGNVSWSAVGWLAVPGAVGAFCGAVVLSSVSAEAAKPWIALFLFLLGTYIL 115

Query: 143 KR-----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKAT 196
            R           +K          G + GFL  A G G G  +   +L  G     +  
Sbjct: 116 IRFAFLGQSTPQIKKQLTPKFLVPLGALAGFLDAAGGGGWGPISTPTILASGRLDPRRTV 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T      L+A  A    + S              + +  VL +L   ++  P+A  L  
Sbjct: 176 GTVDTSEFLVAIAASAGFLVSLDRSQ---------IALQLVLALLIGGMIAAPIAAWLVR 226

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            +  + L      ++  T+  
Sbjct: 227 KMHPRVLGSAVGGLILLTNAR 247


>gi|290979934|ref|XP_002672688.1| predicted protein [Naegleria gruberi]
 gi|284086266|gb|EFC39944.1| predicted protein [Naegleria gruberi]
          Length = 418

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 94/277 (33%), Gaps = 35/277 (12%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S + GT  G+ G+GG ++++P++++ F  +     +     + T L  +     + 
Sbjct: 146 LFGVSIVGGTFGGMVGLGGNIILIPLITQLFPHL-----LSAKQIVATCLVTVVTAGFVG 200

Query: 86  FMEHRRHG--TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG--ILM 141
                  G  ++++            T      + S +    L    A F L +   + +
Sbjct: 201 AGTLYFVGDNSVDIVTSILIATFAAFTARFGVKLSSSIQDRTLKLILACFMLFVAPLVSL 260

Query: 142 LKRDRLYCER---------------KFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNL 183
           L  D    +                K P        ++ G + G +SG LGVGGGI    
Sbjct: 261 LHSDDEKEKPVSDSTKEQSETNQKLKLPSIQEAGALFVLGSIIGVMSGLLGVGGGILIVP 320

Query: 184 LMLFY---GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
            + F     + I K        S  +     L  +     +     W +G V +    I+
Sbjct: 321 ALSFLWSDKSPIKK-----EHTSTKLVIGTSLAAMTIPSSVALYSHWRVGNVILKLAPIL 375

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           +  S +       L+  + ++ L   FS+ M      
Sbjct: 376 MTGSAVGAYSGGFLASNMDEQVLKHTFSLTMLLLGIR 412



 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 40/133 (30%), Gaps = 13/133 (9%)

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML---FYGASIYKATATSAGV 202
           +        D    +   +V G   G +G+GG I    L+     +  S  +  AT    
Sbjct: 133 KPNPVFNTWDFVKLFGVSIVGGTFGGMVGLGGNIILIPLITQLFPHLLSAKQIVATCLVT 192

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
                F       + G             V+I   ++I   +        KLS  I  + 
Sbjct: 193 VVTAGFVGAGTLYFVGDNS----------VDIVTSILIATFAAFTARFGVKLSSSIQDRT 242

Query: 263 LTIGFSMIMFTTS 275
           L +  +  M   +
Sbjct: 243 LKLILACFMLFVA 255


>gi|257470897|ref|ZP_05634987.1| transporter [Fusobacterium ulcerans ATCC 49185]
 gi|317065098|ref|ZP_07929583.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
 gi|313690774|gb|EFS27609.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
          Length = 255

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 51/271 (18%), Positives = 100/271 (36%), Gaps = 27/271 (9%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           + K+ +     ++    F+   +  + G GGGL+ +P     +   G+      H+A+GT
Sbjct: 1   MLKELLTSQFIILACLCFVGAFIDSVAG-GGGLISLPA----YLASGLPP----HIALGT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +      + V S + + R G +N  ++K       +   +   +I      ++N      
Sbjct: 52  NKLSGFFSGVGSSVNYARSGKVNWNLMKKLAPFSFVGAFIGVKIIIGTKPQYINYIVFTA 111

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVGGGIFTNLLML-F 187
            +++    L   ++  E  F            I   V GF +G LG G G F    M+  
Sbjct: 112 LIVVLAYTLTNKKMGHESTFTGLTKSNVTKGMIMAFVIGFYNGFLGPGTGSFLVFFMMKI 171

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           +G    +A   S  ++ +  F +LLV   SG             V     + I  I +L 
Sbjct: 172 FGYDFVEANGDSKILNLIGNFTSLLVFGISGK------------VYFLYGIPISIIMLLG 219

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               ++ +   G +++   F  +   T+   
Sbjct: 220 AQCGSRCAISKGSRFIKPVFLTVTTVTALKM 250


>gi|283955768|ref|ZP_06373259.1| hypothetical protein C1336_000060079 [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792723|gb|EFC31501.1| hypothetical protein C1336_000060079 [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 261

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 70/185 (37%), Gaps = 13/185 (7%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           LFG+GGG+++VP +               H A+G S+  +   +V     + +   +N+K
Sbjct: 21  LFGIGGGMIIVPSMFAL--------GASAHHAIGISVLQMIFAAVFGSYINYKKKNLNLK 72

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD--- 155
                 F   I    + +++  +    L   F     +  I      +    +       
Sbjct: 73  DGVMIGFGGLIGASFSGMLLKALSDVALTSVFLAASCIFFIKYAFGIKENIMQIQRSVWV 132

Query: 156 -NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
            N + +I G  TG  + +LG+GGG+    ++ ++ G    K  + S       +   ++ 
Sbjct: 133 KNIILFIAGAFTGIFAISLGIGGGLLIAPILAYFLGYDSKKVVSLSLFFVIFASVSGIIS 192

Query: 214 RIYSG 218
              SG
Sbjct: 193 FSNSG 197


>gi|222148175|ref|YP_002549132.1| hypothetical protein Avi_1573 [Agrobacterium vitis S4]
 gi|221735163|gb|ACM36126.1| Conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 259

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 78/215 (36%), Gaps = 15/215 (6%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           HVA+GT    ++  ++++F  H   G +  +    +  +  I  +  S +   +D + L 
Sbjct: 43  HVAIGTGALAVSANALINFASHALKGNVRWRCGAVFAALGVIGALAGSSLGKAMDGTRLL 102

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI-----FTN 182
             F I  + +G+ ML+  +       P +    +   +   +SGA     GI        
Sbjct: 103 LLFGIVMVAVGVWMLRPRKAVAAAPRPVDLRMCLTTALVALVSGAASGFFGIGGGFLIVP 162

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            L+L  G  +  A  TS            +    SG     L    +    +G +L  + 
Sbjct: 163 GLILATGMPMINAVGTSLMAVTAFGLATAVNYALSGLVDWALAAEFI----LGGLLGGIV 218

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            ++  T L         K  L   F+ ++F  +F 
Sbjct: 219 GTLAATRLGAH------KNTLNRMFAAMVFLVAFY 247


>gi|152996364|ref|YP_001341199.1| hypothetical protein Mmwyl1_2342 [Marinomonas sp. MWYL1]
 gi|150837288|gb|ABR71264.1| protein of unknown function DUF81 [Marinomonas sp. MWYL1]
          Length = 253

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 95/269 (35%), Gaps = 34/269 (12%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
               I A    G   G+ GVGGG +M P+L     + G       H+A+GT L       
Sbjct: 3   FLWYISAGAAVGLAVGITGVGGGSLMTPLLL----MFGFPP----HIAIGTDLMYAGIAK 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
               + H + G +N KI+          +++T   +S  +     +  L     +  ++ 
Sbjct: 55  STGVVMHAKRGNVNWKIVFAMAAGSIPASLITVWALSQFEKPDHYQEILTSTLGMMLIIT 114

Query: 138 GILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
            +++L R +L     F         + ++ G + G L     VG G     +M+     I
Sbjct: 115 AMVILFRAKLTKALSFNISEDQSTKIVFVCGFILGVLVTLTSVGAGALGTAIMMIL-FPI 173

Query: 193 YKA---TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
            +A     T    +  +   A    I+            LG V+   +  +L  SI    
Sbjct: 174 MRAKNIVGTDLAHAVPLTLVAGTGHIF------------LGNVDYSLLAALLIGSIPTIY 221

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           + T+++  +    L    +  + +    +
Sbjct: 222 IGTRIASHVPNHVLQPVLATALLSFGVKY 250



 Score = 40.4 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ V  F+ G L  L  VG G +   ++   F +M           +GT L    P +++
Sbjct: 140 IVFVCGFILGVLVTLTSVGAGALGTAIMMILFPIM------RAKNIVGTDLAHAVPLTLV 193

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +   H   G ++  +L   +     T  + + + SHV    L    A   L  G+  L 
Sbjct: 194 AGTGHIFLGNVDYSLLAALLIGSIPTIYIGTRIASHVPNHVLQPVLATALLSFGVKYLF 252


>gi|113970786|ref|YP_734579.1| hypothetical protein Shewmr4_2451 [Shewanella sp. MR-4]
 gi|117921054|ref|YP_870246.1| hypothetical protein Shewana3_2613 [Shewanella sp. ANA-3]
 gi|113885470|gb|ABI39522.1| protein of unknown function DUF81 [Shewanella sp. MR-4]
 gi|117613386|gb|ABK48840.1| protein of unknown function DUF81 [Shewanella sp. ANA-3]
          Length = 269

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 84/222 (37%), Gaps = 13/222 (5%)

Query: 1   MYDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG 60
           M  L   +S++  +  +  +    L+   + ++G +  + G GGGL+ +P L  A     
Sbjct: 1   MRSLSSYYSIITIMEFELTLQIAALLFGVAMVAGFIDSIAG-GGGLLTIPALMWA----- 54

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
               +   VA+GT+       S  + +   R G +++K +K  +        + ++++  
Sbjct: 55  ---GLPPAVALGTNKLQACGGSFFASLYFVRKGLVDLKAVKLSLICAFAGAALGTILVQL 111

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVG- 176
           VD   L        L +G   L   ++  + +          +   +  G   G  G G 
Sbjct: 112 VDAKVLELVLPFLILAIGCYFLFSKKISEDDRHQVLTPTAFAFTAALGVGLYDGFFGPGT 171

Query: 177 GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           G  F    +   G  + KATA +  ++      +L+     G
Sbjct: 172 GSFFALAFVTLAGFGLAKATAHAKVLNFSTNIASLIFFTLGG 213


>gi|294637234|ref|ZP_06715536.1| inner membrane protein YfcA [Edwardsiella tarda ATCC 23685]
 gi|291089580|gb|EFE22141.1| inner membrane protein YfcA [Edwardsiella tarda ATCC 23685]
          Length = 266

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 89/238 (37%), Gaps = 25/238 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + I ++   +  +G +  + G GGGL+ VP L       G+  +     A+ T+      
Sbjct: 9   ELIGILFCVALFAGFIDAIAG-GGGLLTVPALL----AAGLPPAQ----ALATNKLQSVG 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R   +N+   K  I +  + + + ++++  +    L +      + +GI 
Sbjct: 60  GSFSASLYFVRRRVVNLAQQKWVILLTFLASAIGTVLVQCLQADILRQLLPYLVICVGIY 119

Query: 141 MLKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L    L      P         + G   GF  G  G G G F  L  ++  G ++ KAT
Sbjct: 120 FLLTPSLGASEGIPRIGIALFAVVGGACVGFYDGFFGPGAGSFYALAYVMLLGLTLPKAT 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A +  ++      +LL  I              G V     L++L   ++   L  ++
Sbjct: 180 AHAKVLNFTSNAASLLFFILG------------GNVVWVVGLLMLVGQVIGARLGARM 225


>gi|262278091|ref|ZP_06055876.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258442|gb|EEY77175.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 260

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 96/261 (36%), Gaps = 25/261 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + ++ + + ++G +  + G GGGL+ +P L     L G+        A+ T+    A 
Sbjct: 4   ELLLILGLVAMVAGFIDAIAG-GGGLITLPALL----LSGVPPVS----AIATNKLQAAS 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            ++ + +   R G I  +       +  +  ++ +L ++ + K+ L     I  +L+ + 
Sbjct: 55  ATLSATISFARKGLIEWRKAIPIACMSFLGGILGALSVTLMPKNVLLTIVPILLILVALY 114

Query: 141 MLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +   +L    K    P      +   + GF  G  G G G  F    +L  G  +  A 
Sbjct: 115 FIFSPKLSDVDKKPLIPYFLFALLVAPLLGFYDGVFGPGVGSFFIVAFVLLLGFKLVSAL 174

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           + +   +      +L + I              G+V     L++   + +   +  K + 
Sbjct: 175 SYTKLANVACNLGSLSIFIIK------------GYVIFPIALVMAGGAFIGASIGAKFAV 222

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G + +     +I    +  
Sbjct: 223 RFGSRVIKPLLILISLCMALK 243


>gi|241668092|ref|ZP_04755670.1| hypothetical protein FphipA2_04944 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876627|ref|ZP_05249337.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842648|gb|EET21062.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 249

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 102/263 (38%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +I+  F+ G   GL G GG ++ VP+L+           +  H A+  SL V+  T++
Sbjct: 1   MFLIIFGFICGIALGLTGGGGSILAVPLLTY-------GVGLDFHTAVPISLLVVGFTAI 53

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + + +   IN       I    I   + S +   +    L  +F+I  + +GI  L 
Sbjct: 54  FGLVVNYKQHDINYLAAAIMITTGVIFAPIGSYISQGLSDKVLMVSFSILMITIGIWSLI 113

Query: 144 RDRLYCERK--------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYK 194
           + ++    +                + G + G L+G  GVGGG      ++F     I +
Sbjct: 114 KAKVMSGAEKSICESIAPKCIIALLVSGAIVGTLTGFFGVGGGFLIVPALVFITAMPIKR 173

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A  TS  V  +++    +      +    +  +  G        + +  S++   +ATKL
Sbjct: 174 AINTSLLVIFVVSISGFISH----YEEEHMSWYVAG--------MFIIGSVIAMLIATKL 221

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K L   F++++     V
Sbjct: 222 KKRLNDKILQTLFAIMLVVLGAV 244



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 7/121 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++V+  + GTL+G FGVGGG ++VP L           ++ +  A+ TSL VI   S
Sbjct: 134 IIALLVSGAIVGTLTGFFGVGGGFLIVPALVFI-------TAMPIKRAINTSLLVIFVVS 186

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +  F+ H     ++  +   +I    I  ++ + +   ++   L   FAI  +++G ++ 
Sbjct: 187 ISGFISHYEEEHMSWYVAGMFIIGSVIAMLIATKLKKRLNDKILQTLFAIMLVVLGAVIY 246

Query: 143 K 143
            
Sbjct: 247 L 247


>gi|48477594|ref|YP_023300.1| transporter [Picrophilus torridus DSM 9790]
 gi|48430242|gb|AAT43107.1| transporter [Picrophilus torridus DSM 9790]
          Length = 252

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 90/252 (35%), Gaps = 27/252 (10%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G L+G+ G  G L++VP LS           +    A+G+SL V   T+ +    +
Sbjct: 12  GIGVGALTGITGSSGVLIVVPALSIM--------GLGFKTAVGSSLLVDVITTTIVIYVY 63

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
            +  T+++           I   + + + S +D   L  AF      M    +KR     
Sbjct: 64  FKDKTLDIYTGLFMGVGAVIGAQIGTYIASMIDAFPLELAFIFMTGYMSYYSMKRSFKKT 123

Query: 150 E------RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATATSAGV 202
                   +     V  +  +  G L+G +G  GG+    + ML +  S  K   T+   
Sbjct: 124 NIAKRNIERKKALPVAMLLSIPIGILTGTIGTSGGVMFVFITMLLFNISAQKMVGTATLA 183

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
               A   +   I             +G ++    +II  I+++     +  ++ I +KY
Sbjct: 184 MLFSALSGVGGYI------------RIGHIDFLYSIIIGGIALISGYYFSVFAHRIDEKY 231

Query: 263 LTIGFSMIMFTT 274
           +    S I    
Sbjct: 232 IYRSLSFIFMAV 243


>gi|222109462|ref|YP_002551726.1| hypothetical protein Dtpsy_0242 [Acidovorax ebreus TPSY]
 gi|221728906|gb|ACM31726.1| protein of unknown function DUF81 [Acidovorax ebreus TPSY]
          Length = 252

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 91/253 (35%), Gaps = 25/253 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +AS L+G +  + G GGGL+++P L   F       +  M    GT+       + 
Sbjct: 4   IIVSLASLLAGFVDAIVG-GGGLILLPALFATFPTA--PPATLM----GTNKSAAIWGTG 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++  ++ R   +  + +        +     + +++ +   FL K   +  + + I  L 
Sbjct: 57  IATWQYSRRVQMRWRAMLPAALAGFVGAFAGAWVVTLISADFLRKLLPLVLVALLIYTLA 116

Query: 144 RDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATA 197
           R  L           +        G+  GF  G  G G G F   L +   G     A+ 
Sbjct: 117 RKDLGRHHAPRLAAGRETLAACAIGVTIGFYDGFFGPGTGSFFVFLFVRVLGYDFLNASV 176

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           ++  ++      AL++                G V     L +   +++ + L   L+  
Sbjct: 177 SAKLLNLATNVAALILFTAK------------GHVWWHFALPLAVANVVGSLLGAHLALK 224

Query: 258 IGKKYLTIGFSMI 270
            G  ++   F ++
Sbjct: 225 HGAGFVRGIFILV 237


>gi|301168850|emb|CBW28441.1| conserved inner membrane protein [Haemophilus influenzae 10810]
          Length = 255

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 99/239 (41%), Gaps = 25/239 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + ++    F++  +  + G GGGL+ +P L     + G+  +    +A+GT+     
Sbjct: 5   IDLLAILFCVGFVASFIDAIAG-GGGLITIPALL----MTGMPPA----MALGTNKLQAM 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ + +   R   +N++ +   +  + + + + +L+I  +D +   K      L +G+
Sbjct: 56  GGALSASLYFLRKRAVNLRDIWFILIWVFLGSALGTLLIQSIDVAIFKKMLPFLILAIGL 115

Query: 140 LMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
             L   +L  E   ++        +     GF  G  G G G I +   +   G ++ KA
Sbjct: 116 YFLFTPKLGGEDRKQRLSYLLFGLLVSPFLGFYDGFFGPGTGSIMSLACVTLLGFNLPKA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            A +  ++      +  + +  G  L     W +GFV       ++  SIL   L  K+
Sbjct: 176 AAHAKVMNFTSNLASFALFLLGGQIL-----WKVGFV-------MMAGSILGANLGAKM 222


>gi|291614028|ref|YP_003524185.1| hypothetical protein Slit_1565 [Sideroxydans lithotrophicus ES-1]
 gi|291584140|gb|ADE11798.1| protein of unknown function DUF81 [Sideroxydans lithotrophicus
           ES-1]
          Length = 255

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 76/202 (37%), Gaps = 13/202 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ + ++ +G +  + G GGGL+ +P L  AF       +       GT+       +
Sbjct: 6   IAILCLFAYSAGMVDAVVG-GGGLIQIPALINAF------PNSPPATIFGTNKLASICGT 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++   +    T+  +++        + +   +  +S V + +L     +  + M   + 
Sbjct: 59  SVAARSYFGQMTVPWRLVLPAAISAFVMSFFGAAAVSFVPQHWLRPIVLVLVVAMAFYIF 118

Query: 143 KRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +      R        +  +  + G   GF  G  G G G     L + ++     +A+
Sbjct: 119 HKKDFGTIRHVLHFGTRERILSVLIGGGIGFYDGLFGPGTGSFLIFLFVRYFSFDFLQAS 178

Query: 197 ATSAGVSALIAFPALLVRIYSG 218
            ++  V+      ALL  I SG
Sbjct: 179 VSAKFVNITTNLAALLFFIPSG 200


>gi|116049774|ref|YP_791419.1| hypothetical protein PA14_40940 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115584995|gb|ABJ11010.1| putative membrain protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 259

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 96/263 (36%), Gaps = 25/263 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ V +FL+G +  + G GGGL+ +P L  A    G+      H+A+GT+      
Sbjct: 10  STLIILAVVAFLAGFIDAIAG-GGGLLTIPALLTA----GVPP----HLALGTNKLSSTF 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     R    +    ++ +    I   + +     +   +LN+   +     G+ 
Sbjct: 61  GAATASYTFYRRKLFHPGKWRNALLATAIGAAIGAWAAHLLPAEWLNRMLPVVVFTCGLY 120

Query: 141 MLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
           ML                   ++  G+  GF  G  G G G F T   +L Y   + +A+
Sbjct: 121 MLFGGTPKAPLDADTPVGRKRQWPQGLALGFYDGVAGPGTGAFWTVSSLLMYPLDLVRAS 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++ +    AL V + SG             V     L +    ++      + + 
Sbjct: 181 GVARSMNFVSNIVALAVFVASGQ------------VIWLLGLCMGASLMVGAYFGARTAI 228

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G K++   F +++   +   A
Sbjct: 229 GGGAKFIRPVFILVVLALTARLA 251


>gi|159041329|ref|YP_001540581.1| hypothetical protein Cmaq_0755 [Caldivirga maquilingensis IC-167]
 gi|157920164|gb|ABW01591.1| protein of unknown function DUF81 [Caldivirga maquilingensis
           IC-167]
          Length = 276

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 92/274 (33%), Gaps = 33/274 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +++  L G   GL G GG ++ VP+      L  I +    H+A+GT+   +   + 
Sbjct: 10  ALSVISGILVGFSLGLIGGGGSILAVPLFLYLVGLDTIPN--AAHIAIGTTALAVGLNAY 67

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++   H R   +  +I   +  V  +  ++ + +      + L   F+I  +++G+ +  
Sbjct: 68  INSYMHLRKHNVAPRIGGIFAGVGVVGALIGAYLGHITPGTRLLIYFSIAMIVLGVYVAV 127

Query: 144 RDRLY------------------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
           R                                    G   G +SG  G+GGG      +
Sbjct: 128 RRESAKAGTDDEVDRVIQSLNKCPRLTLGTIMKVAGAGFAVGLVSGYFGIGGGFLIVPAL 187

Query: 186 LFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +F  G  I +A  TS          +                W+ G V +    + +   
Sbjct: 188 MFSTGLCITRAIGTSLISVGTFGVASGAEY------------WAYGEVLVLIAALYVLGG 235

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           I      T ++    K  L + + +I+       
Sbjct: 236 IAGGYAGTSIAVKAPKNTLRVAYGVIIVLVGIYM 269



 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 7/125 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I  +  A F  G +SG FG+GGG ++VP L            +C+  A+GTSL  + 
Sbjct: 155 LGTIMKVAGAGFAVGLVSGYFGIGGGFLIVPALMF-------STGLCITRAIGTSLISVG 207

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              V S  E+  +G + + I   ++          + +     K+ L  A+ +  +L+GI
Sbjct: 208 TFGVASGAEYWAYGEVLVLIAALYVLGGIAGGYAGTSIAVKAPKNTLRVAYGVIIVLVGI 267

Query: 140 LMLKR 144
            ML R
Sbjct: 268 YMLYR 272


>gi|315635689|ref|ZP_07890952.1| membrane protein [Arcobacter butzleri JV22]
 gi|315479986|gb|EFU70656.1| membrane protein [Arcobacter butzleri JV22]
          Length = 249

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 89/242 (36%), Gaps = 25/242 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  V+   L+   +F++G +  + G GGGL+ +P L       GI  +     A+ T+  
Sbjct: 2   EFTVEIFLLLFFVAFIAGLIDTIAG-GGGLLTIPTLLYV----GIPPAT----ALATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                S  + M   R   +N+K +K  +    +  ++    +  +D S L +   I  ++
Sbjct: 53  QATFGSFTAAMYFIRKKMVNIKEIKLMLIFTFLGAILGVFTLLQIDASILKQVIPILLII 112

Query: 137 MGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
           +G   L    +     E++       +      GF  G  G   G  F    +   G ++
Sbjct: 113 IGFYFLFSPSVGAIDKEKRISIIVFSFTLAFGVGFYDGFFGPATGSFFAIGFIALLGFNL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            KATA +  ++ +    +L   ++ G             +     L +    I    +  
Sbjct: 173 TKATAHAKVLNFVSNISSLCFFMFFGK------------IYWSIGLCMGVGQICGALIGA 220

Query: 253 KL 254
           +L
Sbjct: 221 RL 222


>gi|117921072|ref|YP_870264.1| hypothetical protein Shewana3_2631 [Shewanella sp. ANA-3]
 gi|117613404|gb|ABK48858.1| protein of unknown function DUF81 [Shewanella sp. ANA-3]
          Length = 257

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 94/263 (35%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ V   ++G +  + G GGGL+ +P L       GI      H A+GT+    +  S 
Sbjct: 11  ALLAVIGLIAGFIDAVVG-GGGLLSIPALLTL----GIPP----HTALGTNKFAASFGSS 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+   + R   +             I  V+ S+ +  ++  +L KA  +  + + I  L 
Sbjct: 62  MAAWTYYRQHLLKPSFWYMAFIATFIGAVLGSVFVYLLNAQWLEKALPLLIIGIAIYSLL 121

Query: 144 RDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
                         K      + + G++ G   G  G G G F T      Y   +  + 
Sbjct: 122 SPNAISDTDCQAPTKAQSKLKQSLQGLLLGAYDGFAGPGIGAFWTVSSGALYKLPLLHSC 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++      AL +               LG V+    L +    +L + +  + + 
Sbjct: 182 ALAKAMTFTSNLTALAIF------------GFLGQVHWQIGLWMGLSMMLGSFIGARCAI 229

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F +I+ + +   A
Sbjct: 230 KFGMPFIRPLFILIVLSIAANLA 252


>gi|300771150|ref|ZP_07081026.1| probable permease [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761820|gb|EFK58640.1| probable permease [Sphingobacterium spiritivorum ATCC 33861]
          Length = 277

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 87/258 (33%), Gaps = 44/258 (17%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++++P+L+  F        + +  A+G +L     TS  +   + + G  N+++      
Sbjct: 30  VIVIPLLTLYFH-------VDIRYAIGAALLASIATSSGAATAYVKEGITNIRLGMFLEI 82

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR------------------- 146
              +  V+ +L+  +   + +   F +  +    + L++                     
Sbjct: 83  ATTLGAVIGALVAIYTPTNTIAVIFGVVLIFSAAMTLRKKNESALTEGSKLAEKLKLNND 142

Query: 147 -----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA 200
                     K  +    +    + G +SG LG+G G    L M          +T TS 
Sbjct: 143 YPVNGKSVSYKLTNVAGGFSIMTLAGVISGLLGIGSGALKVLAMDGAMRIPFKVSTTTSN 202

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  + A  + +V +  G+   G+               ++   +      +KL   I  
Sbjct: 203 FMIGVTAAASAVVYLQRGYMDPGI------------AFPVILGVLAGAFTGSKLLTRINP 250

Query: 261 KYLTIGFSMIMFTTSFVF 278
           K L I F++ +   +   
Sbjct: 251 KILRIIFAIAITLVAIEM 268



 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+G +SGL G+G G + V         M     I   V+  TS  +I  T+  S + + +
Sbjct: 166 LAGVISGLLGIGSGALKV-------LAMDGAMRIPFKVSTTTSNFMIGVTAAASAVVYLQ 218

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G ++  I    I  +       S +++ ++   L   FAI   L+ I M+  
Sbjct: 219 RGYMDPGIAFPVILGVLAGAFTGSKLLTRINPKILRIIFAIAITLVAIEMIYN 271


>gi|254488062|ref|ZP_05101267.1| membrane protein [Roseobacter sp. GAI101]
 gi|214044931|gb|EEB85569.1| membrane protein [Roseobacter sp. GAI101]
          Length = 302

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 90/260 (34%), Gaps = 53/260 (20%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG ++ P+L       GI  +    VA+ T    I  +S  + + H +  T++
Sbjct: 28  SGMFGVGGGFLITPLLFFI----GIPPA----VAVATGANQIVASSFSALLAHLKRKTVD 79

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGILMLK-------- 143
           +++    +    +       + +++         +N  + +F  ++G LM          
Sbjct: 80  LRMGSVLLAGGLVGAAGGVGIFNYLKSLGQVDLLVNLCYVVFLGIIGGLMFIESVNALYK 139

Query: 144 --------RDRLYCERKFP------------DNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
                   R +    +K P                  + G   G L+  +GVGGG     
Sbjct: 140 TRSGKRQPRKKHTWIQKLPFKMRFRVTGLYISVIPPLLVGAFVGLLAAIMGVGGGFIMVP 199

Query: 184 LMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            M++  G        TS      +     L+   + +            V+I   +++L 
Sbjct: 200 AMIYLLGMPTKVVVGTSLFQIIFVTAFTTLLHATTNYT-----------VDIILAVLLLV 248

Query: 243 ISILITPLATKLSYMIGKKY 262
             ++     T L   +  + 
Sbjct: 249 GGVIGAQFGTTLGAKLKAEQ 268



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 39/99 (39%), Gaps = 8/99 (8%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G L+ + GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 176 LLVGAFVGLLAAIMGVGGGFIMVPAMIYLL-------GMPTKVVVGTSLFQIIFVTAFTT 228

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           + H     T+++ +    +    I     + + + +   
Sbjct: 229 LLHATTNYTVDIILAVLLLVGGVIGAQFGTTLGAKLKAE 267


>gi|254413848|ref|ZP_05027617.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC
           7420]
 gi|196179445|gb|EDX74440.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC
           7420]
          Length = 280

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 73/241 (30%), Gaps = 34/241 (14%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
             A  ++     +    A+  +L ++   S++  + H R G IN K    +     +   
Sbjct: 27  VLALPILVYVMGVEAKSAIAMTLVIVGTVSLIGVIPHWRRGNINFKKAFMFGAATMVGAF 86

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK-----------------FPD 155
           + + +   V  +F    FA+  ++    M+++     +                      
Sbjct: 87  LGAKLAFFVSGTFQLLLFAVMMIIAAGFMIRKSSKPTQPDNDLQYYPQPVCKYCWVWMLT 146

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
             +          + G   +        L+L     + +A  TS  + A  +    L  +
Sbjct: 147 EGLGVGVLTGLVGVGGGFAI-----VPALVLLGNTPMKEAVGTSLLIIACNSVAGFLGYL 201

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
               G   L    +G   + A + I+        +   L+  +  + L   F   +   +
Sbjct: 202 ----GQVPLDWGLMGSFIVVASVGII--------VGAYLAQYVKAQQLQKAFGYFLIAVA 249

Query: 276 F 276
            
Sbjct: 250 A 250



 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 7/101 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
             +VP L           +  M  A+GTSL +IA  SV  F+ +     ++  ++  +I 
Sbjct: 164 FAIVPALVLL-------GNTPMKEAVGTSLLIIACNSVAGFLGYLGQVPLDWGLMGSFIV 216

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           V  +  +V + +  +V    L KAF  F + +   +L ++R
Sbjct: 217 VASVGIIVGAYLAQYVKAQQLQKAFGYFLIAVAAFILVQNR 257


>gi|289550530|ref|YP_003471434.1| hypothetical protein SLGD_01216 [Staphylococcus lugdunensis
           HKU09-01]
 gi|315658024|ref|ZP_07910897.1| membrane protein [Staphylococcus lugdunensis M23590]
 gi|289180062|gb|ADC87307.1| hypothetical protein SLGD_01216 [Staphylococcus lugdunensis
           HKU09-01]
 gi|315496914|gb|EFU85236.1| membrane protein [Staphylococcus lugdunensis M23590]
          Length = 256

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 97/256 (37%), Gaps = 26/256 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  +  + +II+  FL+  +  + G GGGL+  P L            +   +A+GT+  
Sbjct: 2   DINIYIVLIIILFGFLAAFIDAVVG-GGGLISTPALLAI--------GLPPALALGTNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  S+ S ++  R G +++ I+      + I     + +   +    L     I   L
Sbjct: 53  ASSFGSLTSTIKFIRSGHVDLNIVLKLFPFVFIFAAGGASLAIFLPAEVLKPLIIIILTL 112

Query: 137 MGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
           + +  L +      R F         +     ++ GF  G LG G G F   ++L +G  
Sbjct: 113 VMVYTLVKKDWGSVRTFTKLTPVKAIIFVTLMLIIGFYDGFLGGGTGSFMLFVLLLFGFD 172

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
              A   +  ++      AL++ +  G        + +GF+       +    I+ + + 
Sbjct: 173 FLSAAGNAKVLNFASNIGALILFMILG-----HVDYMIGFI-------MAISMIVGSYVG 220

Query: 252 TKLSYMIGKKYLTIGF 267
            + +   G  Y+ + F
Sbjct: 221 ARFAIAKGVGYIKLLF 236


>gi|160931518|ref|ZP_02078913.1| hypothetical protein CLOLEP_00350 [Clostridium leptum DSM 753]
 gi|156869389|gb|EDO62761.1| hypothetical protein CLOLEP_00350 [Clostridium leptum DSM 753]
          Length = 118

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 8/121 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V  FLSG ++GL G GGG++ VP+L+           +    +  TS+ VI P  V
Sbjct: 6   TLSAVGGFLSGAVNGLLGAGGGMIAVPMLA--------KSGLEAKKSHATSVAVILPICV 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + +   G + +     ++    + +++ S +++ +   +L++ F +  L   + ML 
Sbjct: 58  FSSILYLTDGRVTLGDAAPYLLWGALGSIIGSWLLTKIKDVWLHRIFGVLMLWAAVRMLF 117

Query: 144 R 144
           R
Sbjct: 118 R 118



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 12/124 (9%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
            N +  + G ++G ++G LG GGG+    ++   G    K+ ATS  V   I   + ++ 
Sbjct: 4   KNTLSAVGGFLSGAVNGLLGAGGGMIAVPMLAKSGLEAKKSHATSVAVILPICVFSSILY 63

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +  G    G             +L     SI    + + L   I   +L   F ++M   
Sbjct: 64  LTDGRVTLGDAA--------PYLLWGALGSI----IGSWLLTKIKDVWLHRIFGVLMLWA 111

Query: 275 SFVF 278
           +   
Sbjct: 112 AVRM 115


>gi|52081175|ref|YP_079966.1| membrane protein YtnM [Bacillus licheniformis ATCC 14580]
 gi|52786558|ref|YP_092387.1| YtnM [Bacillus licheniformis ATCC 14580]
 gi|319644857|ref|ZP_07999090.1| YtnM protein [Bacillus sp. BT1B_CT2]
 gi|52004386|gb|AAU24328.1| conserved membrane protein YtnM [Bacillus licheniformis ATCC 14580]
 gi|52349060|gb|AAU41694.1| YtnM [Bacillus licheniformis ATCC 14580]
 gi|317392666|gb|EFV73460.1| YtnM protein [Bacillus sp. BT1B_CT2]
          Length = 295

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 93/263 (35%), Gaps = 26/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++    +  + G  G+  G V    L  AF +     S  +H+A          T+
Sbjct: 4   LIVFVLIGLFAQLIDGALGMAYG-VTSSSLLLAFGIAPAVASASVHLAE-------VVTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H + G ++ + +K  +    +   + +  +S++         ++F L++G+ +L
Sbjct: 56  AASGVSHIKFGNVDKQTVKRLVIPGSLGAFLGASFLSNIPGELAKPYISMFLLVLGVYVL 115

Query: 143 ------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
                  +                  G++ GF     G G G I T +L+   G S  K 
Sbjct: 116 IRFLFMFKIGEQKNNISLSRKKAVPLGLIAGFADATGGGGWGPIATPVLLSKKGVSARKV 175

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             T       IA  A L    S GW            VN   V  ++   I+  P+A  L
Sbjct: 176 VGTVDTSEFAIAVSATLGFFISLGWEE----------VNWLWVGALMIGGIIAAPIAAWL 225

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  + + +    ++   +  
Sbjct: 226 VQKVHARLMGVLVGGLIILVNTR 248


>gi|226946530|ref|YP_002801603.1| hypothetical protein Avin_45130 [Azotobacter vinelandii DJ]
 gi|226721457|gb|ACO80628.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
          Length = 325

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 69/200 (34%), Gaps = 13/200 (6%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+ +S + H + G ++  +    +    +  V+ +++I+  D   L    + + LLMG
Sbjct: 131 VFTTGLSGIAHVKLGNVDKSLFLRLLLPGIVGAVLGAVLITQFDGKVLKPFISAYLLLMG 190

Query: 139 ILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           + +L +  R   +RK P +  K       GF+  A G G G      +L  G+       
Sbjct: 191 LYILGKAYRHALQRKAPRHVAKLAL--FGGFVDAAGGGGWGPVVTSSLLGSGSDPRTTIG 248

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +       +   +    I      +              V  ++   +  +P A  L   
Sbjct: 249 SVNFAEFFLTLSSAASFILLAGQPDT----------WKLVAGLVFGGLFASPFAALLCKK 298

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           +  + L      ++   S  
Sbjct: 299 LSARTLLTIVGCLITLISAY 318


>gi|319898164|ref|YP_004136361.1| inner membrane protein [Haemophilus influenzae F3031]
 gi|317433670|emb|CBY82056.1| conserved inner membrane protein [Haemophilus influenzae F3031]
          Length = 255

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 100/239 (41%), Gaps = 25/239 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + ++    F++  +  + G GGGL+ +P L     + G+  +    +A+GT+     
Sbjct: 5   INLLAILFCVGFVASFIDAIAG-GGGLITIPALL----MTGMPPA----MALGTNKLQAM 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ + +   R   +N++ +   +  + + + + +L+I  +D +   K      L +G+
Sbjct: 56  GGALSASLYFLRKRAVNLRDIWFILIWVFLGSALGTLLIQSIDVAIFKKMLPFLILAIGL 115

Query: 140 LMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
             L   +L  E   ++        +     GF  G LG G G I +   +   G ++ KA
Sbjct: 116 YFLFTPKLGDEDRKQRLSYLLFGLLVSPFLGFYDGFLGPGTGSIMSLACVTLLGFNLPKA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            A +  ++      +  + +  G  L     W +GFV       ++  SIL   L  K+
Sbjct: 176 AAHAKVMNFTSNLASFALFLLGGQIL-----WKVGFV-------MMAGSILGANLGAKM 222


>gi|315649532|ref|ZP_07902617.1| hypothetical protein PVOR_30268 [Paenibacillus vortex V453]
 gi|315275005|gb|EFU38380.1| hypothetical protein PVOR_30268 [Paenibacillus vortex V453]
          Length = 264

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 98/270 (36%), Gaps = 24/270 (8%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  + ++I    +    SGL G+GG ++  P+L       G++      VA   S+  +
Sbjct: 1   MIVQLVVMIFIGIIGSFFSGLLGIGGAIINFPLLLYVPSWFGLEAFTSKEVA-SISMLQV 59

Query: 79  APTSVMSFMEHRRHGT-----INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
              S+   + +R         ++  ++        + +++ SL    +    +N  +   
Sbjct: 60  FFASLSGMITNRMSSRGSESYVHKPLVIQMGASTLVGSLIGSLSSMLMTSGTINVVYGFL 119

Query: 134 CLLMGILMLKRDRLYCERKFP------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
            ++  +LM+   R   E++                 +V G        G  I   +++  
Sbjct: 120 AVIAVLLMIVPTRASMEQRSVSEVTYHSGIAMGAAFIVGGIAGIVGAGGAFILIPIMLTV 179

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                    A+S  +  L A   ++ +I SG           G     ++  ++  S+L 
Sbjct: 180 LKIPTRITIASSLAIVFLSAVGGVIGKIVSG-----------GIPFWPSLFAVV-GSLLG 227

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+   +S  +  + L    ++++  T+F 
Sbjct: 228 APIGAMISRRLNVRLLRYALAILIAVTAFK 257


>gi|257076420|ref|ZP_05570781.1| transporter [Ferroplasma acidarmanus fer1]
          Length = 249

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 94/250 (37%), Gaps = 29/250 (11%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++     G L+G+ G  G LV+VPVLS           I    ++GTSL V   T+ + 
Sbjct: 1   MLIIGIAVGALTGITGSSGVLVVVPVLSYM--------GINFKTSVGTSLLVDVVTTTIV 52

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              + R  T+N  I         I   + SL+   +    L   F      M   ++K+ 
Sbjct: 53  IYVYLRKKTLNPGIGIVLGIGAIIGAQLGSLIAGILPVLPLEIIFTAMAAYMSYYVIKKS 112

Query: 146 --------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
                   R     +     + +   +  G L+G +G  GGI   L +M+F+        
Sbjct: 113 YNIDSHGVRKMELSRNLALIIGFALSIPVGILTGVIGTSGGIMFVLIIMVFFSMKAQNMV 172

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T+     L A    +              + +G ++  A ++I  ++++     +  ++
Sbjct: 173 GTATLAMFLSAASGSIGY------------YDIGHIDFLAAILIGVVALVSGYYFSIFAH 220

Query: 257 MIGKKYLTIG 266
            I +KY+   
Sbjct: 221 KIKQKYIYRF 230


>gi|254229724|ref|ZP_04923133.1| domain of unknown function, putative [Vibrio sp. Ex25]
 gi|151937769|gb|EDN56618.1| domain of unknown function, putative [Vibrio sp. Ex25]
          Length = 263

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 94/261 (36%), Gaps = 26/261 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +   S ++ TL+ L G G GL+  P+L            +   VA+GT         +
Sbjct: 19  LTLFFGSLIANTLASLSGGGAGLLQFPLLIFL--------GLPFSVALGTHKVASVALGL 70

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   H + GTI  K+    I    I  V+ + +I  +      K      L +GI    
Sbjct: 71  GAASTHLKAGTIKWKVALYLIVSGSIGVVLGANLIVQIPDGMAEKMLGSMILALGIYSRF 130

Query: 144 RDRLYCE-----RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
           +  L        R      +  +  M+ G ++G+L  G G+   L ++ ++G +  +A A
Sbjct: 131 KKSLGQSEIIRNRHPIGWVIGGVGLMLIGIINGSLTAGSGLLVTLFLVRWFGYNYKQAVA 190

Query: 198 -TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T   V         +  + +G             ++   + ++L  S L   L    + 
Sbjct: 191 YTMICVGLFWNGIGGIAVVQAGAP-----------IHWAWLPVLLLSSFLGGSLGAWAAT 239

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
               + + I F ++ F+    
Sbjct: 240 RYSNRVIKIAFEILTFSVGIK 260


>gi|37679181|ref|NP_933790.1| permease [Vibrio vulnificus YJ016]
 gi|37197923|dbj|BAC93761.1| predicted permease [Vibrio vulnificus YJ016]
          Length = 251

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 94/260 (36%), Gaps = 24/260 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +   S ++ TL+ L G G GL+  P+L       G        +A+ T         +
Sbjct: 7   LFLFFGSLIANTLASLAGGGAGLLQFPLLIFLGLPFG--------MALATHKLASVALGL 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   H + G I +      I    I  ++ + ++  +          I  LL+G+    
Sbjct: 59  GAAYTHLKSGKIKLTTAFYLILTGSIGVIIGANIVLMIPSDIAEFMLGIMILLLGVYSRF 118

Query: 144 RDRLYCE-----RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
           + +L  E     R      +  +  ++ G ++G+L  G G+   L ++ ++G    +A A
Sbjct: 119 KKQLGQEEKPRNRDLSGWLLGGVGLLLIGIINGSLTAGSGLLVTLFLVRWFGYDYKQAVA 178

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +            +   ++G G   +       V+   + I+L  S L   L   ++  
Sbjct: 179 LTLIC---------VGFFWNGIGGIAVVQAGA-PVHWPWLPILLASSFLGGALGAWMTNH 228

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
              + + I F ++ F     
Sbjct: 229 YSNRTVKIAFELLTFAVGLK 248


>gi|225017187|ref|ZP_03706379.1| hypothetical protein CLOSTMETH_01113 [Clostridium methylpentosum
           DSM 5476]
 gi|224950106|gb|EEG31315.1| hypothetical protein CLOSTMETH_01113 [Clostridium methylpentosum
           DSM 5476]
          Length = 117

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            IV   ++G L+GLFG GGG+ +VP+L  A         I    +  TS+ +IA  SV+S
Sbjct: 7   FIVTGAVAGLLNGLFGAGGGVAVVPLLEHA--------GIEARKSHATSIAIIAALSVVS 58

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              +  +G  +      ++    +  VV + ++  +    L + F    +L  I +L R
Sbjct: 59  AAFYLFNGKFDFWQALPYLPFGLVGAVVGAKLLPKIPNKLLKRIFGGVMILSAIRLLLR 117



 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 12/118 (10%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            + G V G L+G  G GGG+    L+   G    K+ ATS  + A ++  +    +++G 
Sbjct: 8   IVTGAVAGLLNGLFGAGGGVAVVPLLEHAGIEARKSHATSIAIIAALSVVSAAFYLFNGK 67

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                      F    A+  + P  ++   +  KL   I  K L   F  +M  ++  
Sbjct: 68  -----------FDFWQALPYL-PFGLVGAVVGAKLLPKIPNKLLKRIFGGVMILSAIR 113


>gi|21673572|ref|NP_661637.1| hypothetical protein CT0742 [Chlorobium tepidum TLS]
 gi|21646684|gb|AAM71979.1| membrane protein, putative [Chlorobium tepidum TLS]
          Length = 278

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 86/259 (33%), Gaps = 45/259 (17%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +V+VP+L+           I +  A+GTSL  +  TS  +   + + G  N++I      
Sbjct: 30  VVIVPLLTLGL-------GIDLRYAVGTSLVAVIATSSGAAAAYVKEGFSNIRIGLFLEV 82

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV------- 158
              +  +V + +   +  + +   F +  L    L  K    + +   PD          
Sbjct: 83  ATTVGALVGAFLAGMLATNIIAIIFGLVLLYSAYLSTKAKEDHSDDVNPDPLAIKFKLNS 142

Query: 159 --------------KYIWGMVT----GFLSGALGVGGGIFTNLLM-LFYGASIYKATATS 199
                             G       G LSG LG+G G    L M          +  TS
Sbjct: 143 SYPTEEGVKHYSVHNVGAGFGLMWLAGILSGLLGIGSGAVKVLAMDHAMRLPFKVSATTS 202

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +  + A  +  V    G+   GL            +L IL  S     +  KL  +  
Sbjct: 203 NFMIGVTAAASAGVYFQRGYINAGLT--------FPVMLGILAGSF----IGAKLLMVAK 250

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            K+L + F +++F      
Sbjct: 251 TKWLRLIFGVVIFALGLEM 269



 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+G LSGL G+G G V V  +  A +L          V+  TS  +I  T+  S   + +
Sbjct: 167 LAGILSGLLGIGSGAVKVLAMDHAMRL-------PFKVSATTSNFMIGVTAAASAGVYFQ 219

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G IN  +    +  +   + + + ++      +L   F +    +G+ M+  
Sbjct: 220 RGYINAGLTFPVMLGILAGSFIGAKLLMVAKTKWLRLIFGVVIFALGLEMIFN 272


>gi|309784963|ref|ZP_07679596.1| conserved hypothetical protein [Shigella dysenteriae 1617]
 gi|308927333|gb|EFP72807.1| conserved hypothetical protein [Shigella dysenteriae 1617]
          Length = 269

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 13/180 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLGVLFFVAMLAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +  I ++  +L++ +V    L + F I  + +G+  
Sbjct: 65  SISATIYFIRRKVVSLSDQKLNIAMTFIGSMSGALLVQYVQADVLRQIFPILVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G   G F  L  +   G ++ KATA
Sbjct: 125 LLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATA 184


>gi|261252557|ref|ZP_05945130.1| hypothetical protein VIA_002581 [Vibrio orientalis CIP 102891]
 gi|260935948|gb|EEX91937.1| hypothetical protein VIA_002581 [Vibrio orientalis CIP 102891]
          Length = 259

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 86/253 (33%), Gaps = 28/253 (11%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G +  + G GGG++ VP L            +  H+A+GT+       S  + + + R  
Sbjct: 20  GFIDAVAG-GGGMLTVPTLLSL--------GLPPHIALGTNKLAATFASSTAALTYYRKK 70

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-MLKRDRLYCERK 152
               +             ++ +L +  +   +L K   +  L   I  +  +       +
Sbjct: 71  LFKPECWGRAFIATLTGAILGTLFVDLISTQWLEKILPLVILAAAIYTIWHKTPSQVNNE 130

Query: 153 FPD-----NYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATSAGVSALI 206
            PD        +Y  G+  GF  G  G G G F T   M  Y  +I  A+  +  ++   
Sbjct: 131 TPDPCPTVKKKQYAQGLTLGFYDGVAGPGTGAFWTVSSMALYRLNILLASGLAKAMNFTS 190

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
            F +L+                LG ++    L +    +    +    +   G K++   
Sbjct: 191 NFTSLVTFAI------------LGHIDWVLGLTMGVCLMAGAFVGAHSAIKFGAKFIRPV 238

Query: 267 FSMIMFTTSFVFA 279
           F  ++   +   A
Sbjct: 239 FVTVVSILAVKLA 251


>gi|296389785|ref|ZP_06879260.1| hypothetical protein PaerPAb_16616 [Pseudomonas aeruginosa PAb1]
 gi|313110522|ref|ZP_07796407.1| putative membrane protein [Pseudomonas aeruginosa 39016]
 gi|310882909|gb|EFQ41503.1| putative membrane protein [Pseudomonas aeruginosa 39016]
          Length = 259

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 96/263 (36%), Gaps = 25/263 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ V +FL+G +  + G GGGL+ +P L  A    G+      H+A+GT+      
Sbjct: 10  STLIILAVVAFLAGFIDAIAG-GGGLLTIPALLTA----GVPP----HLALGTNKLSSTF 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     R    +    ++ +    I   + +     +   +LN+   +     G+ 
Sbjct: 61  GAATASYTFYRRKLFHPGKWRNALLATAIGAAIGAWAAHLLPAEWLNRMLPVVVFTCGLY 120

Query: 141 MLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
           ML                   ++  G+  GF  G  G G G F T   +L Y   + +A+
Sbjct: 121 MLFGGTPKAPLDADAPVGRKRQWPQGLALGFYDGVAGPGTGAFWTVSSLLMYPLDLVRAS 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++ +    AL V + SG             V     L +    ++      + + 
Sbjct: 181 GVARSMNFVSNIVALAVFVASGQ------------VIWLLGLCMGASLMVGAYFGARTAI 228

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G K++   F +++   +   A
Sbjct: 229 GGGAKFIRPVFILVVLALTARLA 251


>gi|115314987|ref|YP_763710.1| hypothetical protein FTH_1214 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|115129886|gb|ABI83073.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica OSU18]
          Length = 301

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 54/286 (18%), Positives = 104/286 (36%), Gaps = 34/286 (11%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           S +  + +  +I + + L G +  + G+GGGLV+ P+L+           + +H A+G S
Sbjct: 22  SMEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVL-------GVPLHYAIGAS 74

Query: 75  LGVIAPTSVM-SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           L  I  TS   S +  + HG    K+         +  +  + +   +    L   F+  
Sbjct: 75  LVAIICTSTATSLVSLQSHGLTKEKLGLFLALATAVGAIFGAKLAVMLRAKVLFLIFSGI 134

Query: 134 CLLMGILMLKRDRLYCERKFPD----------NYVKYIWG---------MVTGFLSGALG 174
            +++ IL   + +   E K P           N    I G          + GF+   + 
Sbjct: 135 LIVVAILSFIKKKSNAETKPPKQSFIANKLQLNDSVVIAGQKQDYNVNHPIIGFI--FMA 192

Query: 175 VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP--WSLGFV 232
              G      +L  GA I+K  A    +       A       G          +  G++
Sbjct: 193 ---GAGFIGGLLGIGAGIFKVVAMDKIMKIPFRVSASTSNFIMGVTAFAATSTYYFAGYI 249

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +      +   ++L   + +KL   I  K L + F +++F ++   
Sbjct: 250 DSSITAAVALGTLLGATIGSKLMPHIPTKALRLMFFIVVFISTIQM 295



 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 54/143 (37%), Gaps = 12/143 (8%)

Query: 135 LLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIY 193
           +++ IL L   +   E+      + +I  ++ G +   +G+GGG+    L+    G  ++
Sbjct: 9   VIISILELCIQKFSMEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVLGVPLH 68

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A   S       +    L         +GL    LG       L +   + +      K
Sbjct: 69  YAIGASLVAIICTSTATSL----VSLQSHGLTKEKLG-------LFLALATAVGAIFGAK 117

Query: 254 LSYMIGKKYLTIGFSMIMFTTSF 276
           L+ M+  K L + FS I+   + 
Sbjct: 118 LAVMLRAKVLFLIFSGILIVVAI 140



 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I   V+  TS  ++  T+  +   +   G I+  I         +   + S ++ H+   
Sbjct: 219 IPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSITAAVALGTLLGATIGSKLMPHIPTK 278

Query: 125 FLNKAFAIFCLLMGILMLKR 144
            L   F I   +  I M+ +
Sbjct: 279 ALRLMFFIVVFISTIQMIIK 298


>gi|323706508|ref|ZP_08118067.1| protein of unknown function DUF81 [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323534138|gb|EGB23930.1| protein of unknown function DUF81 [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 119

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 7/120 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I+  F++G L+GLFG GGG ++VP +            I  H A  T++ +I P ++ S
Sbjct: 7   LILIGFMTGVLNGLFGAGGGTIIVPFMVFLL-------GIEDHKAHATAISIILPLTIFS 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + + + G  N+ I  +      +  ++ + +++ V   +L K F +  +   I +L   
Sbjct: 60  SIIYIKSGIFNLPITLNVTLGSVVGGLLGASILNKVPIKYLRKIFGMIMIAASIRILLTK 119



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 48/126 (38%), Gaps = 13/126 (10%)

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPAL 211
                   + G +TG L+G  G GGG      M+F  G   +KA AT+  +   +   + 
Sbjct: 1   MKRYVKLILIGFMTGVLNGLFGAGGGTIIVPFMVFLLGIEDHKAHATAISIILPLTIFSS 60

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           ++ I SG              N+   L +   S++   L   +   +  KYL   F MIM
Sbjct: 61  IIYIKSGI------------FNLPITLNVTLGSVVGGLLGASILNKVPIKYLRKIFGMIM 108

Query: 272 FTTSFV 277
              S  
Sbjct: 109 IAASIR 114


>gi|254369458|ref|ZP_04985470.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122408|gb|EDO66548.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 301

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 104/293 (35%), Gaps = 48/293 (16%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           S +  + +  +I + + L G +  + G+GGGLV+ P+L+           + +H A+G S
Sbjct: 22  SMEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVL-------GVPLHYAIGAS 74

Query: 75  LGVIAPTSVM-SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           L  I  TS   S +  + HG    K+         +  +  + +   +    L   F   
Sbjct: 75  LVAIICTSTATSLVSLQSHGLTKEKLGLFLALATAVGAIFGAKLAVMLRAKVLFLIFGGI 134

Query: 134 CLLMGILMLKRDRLYCERKFPD-----NYVKYIWGMVTGF----------LSGALGVGGG 178
            +++ IL   + +   E K P      N ++    +V             + G + + G 
Sbjct: 135 LIVVAILSFIKKKSNAETKPPKQSFIANKLQLNDSVVIAGQKQDYNVNHPIIGFIFMAGA 194

Query: 179 IF-------------TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
            F                +          + +TS  +  + AF A               
Sbjct: 195 GFIGGLLGIGAGIFKVVTMDKIMKIPFRVSASTSNFIMGVTAFAATSTY----------- 243

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +  G+++      +   ++L   + +KL   I  K L + F +++F ++   
Sbjct: 244 -YFAGYIDSSITAAVALGTLLGATIGSKLMPHISTKALRLMFFIVVFISAIQM 295



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I   V+  TS  ++  T+  +   +   G I+  I         +   + S ++ H+   
Sbjct: 219 IPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSITAAVALGTLLGATIGSKLMPHISTK 278

Query: 125 FLNKAFAIFCLLMGILMLKR 144
            L   F I   +  I M+ +
Sbjct: 279 ALRLMFFIVVFISAIQMIIK 298



 Score = 40.8 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 12/143 (8%)

Query: 135 LLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIY 193
           +++ IL L   +   E+      + +I  ++ G +   +G+GGG+    L+    G  ++
Sbjct: 9   VIISILELCIQKFSMEKYLFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVLGVPLH 68

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A   S       +    L         +GL    LG       L +   + +      K
Sbjct: 69  YAIGASLVAIICTSTATSL----VSLQSHGLTKEKLG-------LFLALATAVGAIFGAK 117

Query: 254 LSYMIGKKYLTIGFSMIMFTTSF 276
           L+ M+  K L + F  I+   + 
Sbjct: 118 LAVMLRAKVLFLIFGGILIVVAI 140


>gi|269836101|ref|YP_003318329.1| hypothetical protein Sthe_0068 [Sphaerobacter thermophilus DSM
           20745]
 gi|269785364|gb|ACZ37507.1| protein of unknown function DUF81 [Sphaerobacter thermophilus DSM
           20745]
          Length = 282

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 74/239 (30%), Gaps = 39/239 (16%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            I +  A+  S   +   S      + R G  N+++    +    + ++V  L+  H   
Sbjct: 40  GIPLKTAIAASGVSVVVNSAAGASVYLRDGMPNVRLALLMLVPTTVGSIVGGLLAVHSSP 99

Query: 124 SFLNKAFAIFCLLMGILMLKRD-RLYCERKFPDNYVKYI--------------------- 161
           + L   +A+    M I+M +R  R        D                           
Sbjct: 100 NALRIVYAVSLFGMIIVMARRGARPSPPPAEHDPLGLTASYYDRAIDGGTEVCYTPRRLG 159

Query: 162 ----WGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIY 216
                    G +SG LG+GGG      M       +  ATATS  +       + L+   
Sbjct: 160 PGMSISAGAGMISGMLGIGGGAVQVPAMNAIMQVPVKAATATSTFMVGPTVVASALIYYL 219

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +              V I AVL +    +L      +L+       L     +I+F  +
Sbjct: 220 NDLIDPA--------VAIPAVLGM----MLGAQSGARLARRARGVLLVRILMVILFYLA 266



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G +SG+ G+GGG V VP ++   Q       + +  A  TS  ++ PT V S + +  +
Sbjct: 168 AGMISGMLGIGGGAVQVPAMNAIMQ-------VPVKAATATSTFMVGPTVVASALIYYLN 220

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             I+  +    +  + +     + +        L +   +    +   +  +
Sbjct: 221 DLIDPAVAIPAVLGMMLGAQSGARLARRARGVLLVRILMVILFYLATTVFLQ 272


>gi|91975280|ref|YP_567939.1| hypothetical protein RPD_0800 [Rhodopseudomonas palustris BisB5]
 gi|91681736|gb|ABE38038.1| protein of unknown function DUF81 [Rhodopseudomonas palustris
           BisB5]
          Length = 307

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 99/307 (32%), Gaps = 56/307 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + LI+      G +SG+FG+GGG +M P+L            I   V
Sbjct: 1   MQLYLPIADLPVNVLLILAMGAAVGFVSGMFGIGGGFLMTPLLIFI--------GISPAV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL------------M 117
           A+ +    +A +S    + + R   I+  +    +      T V               +
Sbjct: 53  AVASVTSHMAASSFSGALSYWRRRAIDPMLAFVLLCGGIAGTAVGVWFFVLMRSVGQLDL 112

Query: 118 ISHVDKSFLNKAFAIFCLLMGILMLKRD------------------------RLYCERKF 153
           +  +    L  A     +  G+  + R                         R    + +
Sbjct: 113 MIALSYVVLLTAVGGLMVYEGLRAILRTRRGEVALSGRTGNRNWIHALPLKVRFKRSKMY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G++ GF+   +GVGGG     ++++           TS  ++ +    A +
Sbjct: 173 LSVIPVAAIGLLIGFIGAVMGVGGGFILVPMLIYLLRVPTSMVVGTSMVLTLVTMLVATV 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           +   +   ++ +             LI++   +       +    I  + L +   +++ 
Sbjct: 233 LHAATNHLVDAVLA-----------LILMVGGVTGAQFGARAGQRIRGEQLRLLLGLLVL 281

Query: 273 TTSFVFA 279
                FA
Sbjct: 282 AVGIRFA 288



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 45/130 (34%), Gaps = 8/130 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +     L G +  + GVGGG ++VP+L    +       +   + +GTS+ +   T 
Sbjct: 175 VIPVAAIGLLIGFIGAVMGVGGGFILVPMLIYLLR-------VPTSMVVGTSMVLTLVTM 227

Query: 83  VMSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +++ + H      ++  +    +          +     +    L     +  L +GI  
Sbjct: 228 LVATVLHAATNHLVDAVLALILMVGGVTGAQFGARAGQRIRGEQLRLLLGLLVLAVGIRF 287

Query: 142 LKRDRLYCER 151
                +    
Sbjct: 288 AIELGIRPAE 297


>gi|300871791|ref|YP_003786664.1| transporter membrane [Brachyspira pilosicoli 95/1000]
 gi|300689492|gb|ADK32163.1| transporter membrane [Brachyspira pilosicoli 95/1000]
          Length = 255

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 101/266 (37%), Gaps = 29/266 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + ++I+   ++G +    G GGGL+ +P     + + GI      H A+ T+     
Sbjct: 4   IENLVIVIIGCSIAGFVDAAAG-GGGLISLPA----YLIAGIPP----HTALATNKLTST 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +++S     ++G +  K++K  I +  + ++V   +I  +D   L     I  LL+G+
Sbjct: 55  SGAIVSAFTFFKNGKLTTKLIKFLIPMTILGSIVGVQVIVLIDAKVLQPLIMILILLVGL 114

Query: 140 LMLKRDRLYCER-------KFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGAS 191
             L       E        K  +  +   +  + GF     G G G       +L+Y   
Sbjct: 115 YTLFSKTFGTENLFDENNLKAKNYIIGMFFAFLLGFYDAVFGPGTGSFLIMFFVLYYKMD 174

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
              A+  +  ++      +L++    G             VN  A + ++P  +  T   
Sbjct: 175 FLLASGNAKALNLTSNLCSLIIFAIEGK------------VNYMAGVFVIPFIMTSTYFG 222

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
            K +   G K +   F  I   T+  
Sbjct: 223 AKFAIKKGIKVIKPIFVTISLLTTLK 248


>gi|91225915|ref|ZP_01260884.1| hypothetical protein V12G01_15655 [Vibrio alginolyticus 12G01]
 gi|91189565|gb|EAS75841.1| hypothetical protein V12G01_15655 [Vibrio alginolyticus 12G01]
          Length = 251

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 91/261 (34%), Gaps = 26/261 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +   S ++ TL+ L G G GL+  P+L            +   VA+GT         +
Sbjct: 7   LTLFFGSLIANTLASLSGGGAGLLQFPLLIFL--------GLPFSVALGTHKVASVALGL 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   H R GTI  KI    I    I  ++ + +I  +      K      L +GI    
Sbjct: 59  GAASTHLRSGTIKWKIALYLILSGSIGVILGANLIVQIPDGIAEKMLGTMILALGIYSRL 118

Query: 144 RDRLYCE-----RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
           +  L        R      +  I  +  G ++G+L  G G+   L ++ ++G    +A A
Sbjct: 119 KTSLGQAEVIRNRHPIGWVIGGIGLLFIGIINGSLTAGSGLLVTLFLVRWFGYDYKQAVA 178

Query: 198 -TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T   V         +  + +G             ++   + ++L  S L   L    + 
Sbjct: 179 YTMICVGLFWNGIGGIAVVQAGAP-----------IHWAWLPVLLLSSFLGGSLGAWAAT 227

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
               + + + F ++ F     
Sbjct: 228 RYSNRVIKVAFEILTFAVGIK 248


>gi|317503987|ref|ZP_07961994.1| permease [Prevotella salivae DSM 15606]
 gi|315664847|gb|EFV04507.1| permease [Prevotella salivae DSM 15606]
          Length = 321

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 54/290 (18%), Positives = 108/290 (37%), Gaps = 45/290 (15%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           S   ++ +  L+ + ++ +G L  L G+GGG+V++P+L+  F        I  H A+G +
Sbjct: 42  SSMSIIVFTILLFLGAYCAGLLGSLTGLGGGVVVIPLLTLCF-------GIDFHYAIGAA 94

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           L     TS  S   + + G  N+++         +  V+ +     +  + +   F    
Sbjct: 95  LVASIATSSGSASAYVKEGMTNIRLGMFLEVATSLGAVLGAAAALWMPTNAIAIIFGGVL 154

Query: 135 LLMGILMLKRDRLYCERK-------------------------FPDNYVKYIWGMVTGFL 169
           LL   +  K+   Y + K                           +    +   ++ G L
Sbjct: 155 LLTVAMQFKQKTDYVDVKGSKLAMKLKLFGSYPNKEGKLQNYELKNVPGGFAVMVLAGAL 214

Query: 170 SGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG LG+G G+   L M          +T TS  +  + A  + +V +  G+   G     
Sbjct: 215 SGLLGIGSGVLKVLAMDSCMKVPFKVSTTTSNFMIGVTAVTSAVVYLQRGYIEPG----- 269

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              +    ++ +L  ++       KL   +  K L   F++ +F  +   
Sbjct: 270 ---IAFPIMVGVLAGAMS----GAKLLKRLDVKLLRKIFAVAIFLVALNM 312



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
            L+G LSGL G+G G++ V         M     +   V+  TS  +I  T+V S + + 
Sbjct: 209 VLAGALSGLLGIGSGVLKV-------LAMDSCMKVPFKVSTTTSNFMIGVTAVTSAVVYL 261

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + G I   I    +  +    +  + ++  +D   L K FA+   L+ + M+  
Sbjct: 262 QRGYIEPGIAFPIMVGVLAGAMSGAKLLKRLDVKLLRKIFAVAIFLVALNMIYN 315


>gi|261752603|ref|ZP_05996312.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261742356|gb|EEY30282.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
          Length = 268

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 93/255 (36%), Gaps = 23/255 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+  A+F++G +  + G GGG++ +P L     L GI        A+GT+       S 
Sbjct: 21  LLLTAAAFIAGIIDSIAG-GGGMITIPALL----LAGIPPVE----ALGTNKLQGLFGSS 71

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + R G +N+           +  ++ +++  ++ ++ L        +   +    
Sbjct: 72  SATIAYARKGHVNILQQWPEALASVLGALLATVLPVNIMRAALPMLLIAIAIYFALKPSL 131

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGV 202
            D     R  P  +   +   + GF  G  G G G  F    + F G  + KATA +  +
Sbjct: 132 GDVDRARRIGPFLFGVTLV-PLIGFYDGLFGPGTGSFFMLAFVAFAGYGVLKATAHTKLL 190

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
           +       L                ++G +N    + +     +   +  +L+  IG + 
Sbjct: 191 NCASNIGGLATFA------------AVGVINWKIGISMGIAQFIGAQIGARLAMKIGSRI 238

Query: 263 LTIGFSMIMFTTSFV 277
           +     ++    +  
Sbjct: 239 IKPLLIVVSLALAGR 253



 Score = 35.8 bits (82), Expect = 7.2,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 38/124 (30%), Gaps = 17/124 (13%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
             +      + G +    G GGG+ T   +L  G    +A  T+       +  A +   
Sbjct: 20  TLLLTAAAFIAGIIDSIAG-GGGMITIPALLLAGIPPVEALGTNKLQGLFGSSSATIAYA 78

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                         G VNI         S+L       L+ ++    +     M++   +
Sbjct: 79  RK------------GHVNILQQWPEALASVL----GALLATVLPVNIMRAALPMLLIAIA 122

Query: 276 FVFA 279
             FA
Sbjct: 123 IYFA 126


>gi|225016623|ref|ZP_03705815.1| hypothetical protein CLOSTMETH_00530 [Clostridium methylpentosum
           DSM 5476]
 gi|224950587|gb|EEG31796.1| hypothetical protein CLOSTMETH_00530 [Clostridium methylpentosum
           DSM 5476]
          Length = 256

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 80/216 (37%), Gaps = 17/216 (7%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+G +L      S  S   ++++  I++K     +  + + T+V S + S + ++ ++  
Sbjct: 45  AVGIALASDVLASAASAYTYKKNKNIDIKNGLIMLVSVLLFTLVGSYIASLLPQATMSGF 104

Query: 130 FAIFCLLMGIL------MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
                L  G+       M  ++      K    +   + GM  G + G +G GGG+   L
Sbjct: 105 SMFMTLFAGLKFIIRPVMSAKESNQKRSKRKAAFQSIVCGMAVGLICGFVGAGGGMMMLL 164

Query: 184 LML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           +++   G  +  A  TS  +    A    +     G G+     +S+       +++ + 
Sbjct: 165 VLVSVLGYELKTAVGTSVFIMTFTALTGAVSHFAIGGGIT---DYSI-------LVLCII 214

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +++      K +     K +       +   S   
Sbjct: 215 FTLIGAMFTAKFANRASPKVMNRTLGFGLAAMSIAM 250



 Score = 43.9 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 9/118 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IV     G + G  G GGG++M+ VL              +  A+GTS+ ++  T++   
Sbjct: 141 IVCGMAVGLICGFVGAGGGMMMLLVLVSVL-------GYELKTAVGTSVFIMTFTALTGA 193

Query: 87  MEHRRHGT--INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + H   G    +  IL   I    I  + T+   +      +N+        M I M+
Sbjct: 194 VSHFAIGGGITDYSILVLCIIFTLIGAMFTAKFANRASPKVMNRTLGFGLAAMSIAMI 251


>gi|24373383|ref|NP_717426.1| hypothetical protein SO_1818 [Shewanella oneidensis MR-1]
 gi|24347649|gb|AAN54870.1|AE015625_13 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 257

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 93/263 (35%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+     ++G +  + G GGGL+ +P L       GI      H A+GT+    +  S 
Sbjct: 11  ALLAAIGLVAGFIDAVVG-GGGLLSIPALLTL----GIPP----HTALGTNKFAASFGSS 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+     R   +             I  V+ S+++  ++  +L KA  +  + + I  L 
Sbjct: 62  MAAWTFYRQHLLKPAFWYMAFVATFIGAVLGSILVYLLNAQWLEKALPLLIIGIAIYSLL 121

Query: 144 RDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
                         +      + + G++ G   G  G G G F T      Y   +  + 
Sbjct: 122 SPNAISDTDCQAPTQTQPKLKQSLQGLILGAYDGFAGPGIGAFWTVSSGTLYKLPLLHSC 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++      AL +               LG V+    L +    +L + +  + + 
Sbjct: 182 ALARAMTFTSNLTALAIF------------GYLGQVHWQIGLWMGLSMMLGSFVGARCAI 229

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F +I+ + +   A
Sbjct: 230 KFGMPFIRPLFILIVLSIAANLA 252


>gi|299140326|ref|ZP_07033490.1| protein of unknown function DUF81 [Acidobacterium sp. MP5ACTX8]
 gi|298597714|gb|EFI53888.1| protein of unknown function DUF81 [Acidobacterium sp. MP5ACTX8]
          Length = 279

 Score = 63.2 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 85/259 (32%), Gaps = 45/259 (17%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +V+VP+L            + +H A+G SL  +  TS  +   HR+ G  N ++      
Sbjct: 30  VVIVPMLVLGLH-------VDVHYAIGASLISVIGTSAGAQAAHRQEGFSNTRLGLFLEI 82

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN--------- 156
              +  +  + + +     ++   F    L      +   +     + PD          
Sbjct: 83  ATTLGAICGAFLSASTPTKWIAILFGGVLLYSASSSMGSRKQDTTGRAPDALAAKLRLVG 142

Query: 157 ----------------YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATS 199
                            + +      G LSG LG+G G    L++          +TATS
Sbjct: 143 SYPHEGKLLPYSARRVPLGFGLMFGAGTLSGLLGIGSGAVKVLVLDGAMQIPFKVSTATS 202

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +  + A  +  V +              G++N    + +    +L + L  ++     
Sbjct: 203 NFMIGVTAVASAGVYLRR------------GYINPAVAMPVTIGVLLGSLLGARVLQTAR 250

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            + + I F++++       
Sbjct: 251 VRPMRIIFAIVIALLGAEM 269



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 7/122 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L     F +GTLSGL G+G G V V VL  A Q       I   V+  TS  +I  T+
Sbjct: 158 VPLGFGLMFGAGTLSGLLGIGSGAVKVLVLDGAMQ-------IPFKVSTATSNFMIGVTA 210

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V S   + R G IN  +       + + +++ + ++       +   FAI   L+G  M+
Sbjct: 211 VASAGVYLRRGYINPAVAMPVTIGVLLGSLLGARVLQTARVRPMRIIFAIVIALLGAEMI 270

Query: 143 KR 144
             
Sbjct: 271 FN 272


>gi|182416767|ref|ZP_02948163.1| transporter [Clostridium butyricum 5521]
 gi|237669750|ref|ZP_04529727.1| transporter [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182379381|gb|EDT76877.1| transporter [Clostridium butyricum 5521]
 gi|237654824|gb|EEP52387.1| transporter [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 254

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 103/264 (39%), Gaps = 24/264 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + +I    F +G +  + G GGGL+ +P    A         + +HVA GT+       
Sbjct: 7   MLAIICPLVFCAGFVDAVAG-GGGLISLPAYIFA--------GVPIHVAYGTNKFANCTG 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + ++ M+  + G I +K          I +   + ++  +D+ +L     I   ++ + +
Sbjct: 58  TFVACMKFLKSGNIKIKSGLLSALGALIGSWFGTQLVLILDEKYLKYCLMIILPIVAVFL 117

Query: 142 LKRDRLYCERKFPD------NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYK 194
           L         K  D      N + +I G+V G   G  G G G F  L      G ++  
Sbjct: 118 LFNRNFGSNNKSKDISDKKANLLSFIIGLVIGAYDGFFGPGTGTFLVLAFTSLLGFNLIT 177

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+  +  V+    F AL+  I +G         S+G   I A +  +  + +   +A K 
Sbjct: 178 ASGNAKIVNLASNFAALIAYIING-----KVWLSIG---IPAAICAVLGNYIGAHMAIKN 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
              + K  + +   M++    + F
Sbjct: 230 GARVIKPIILLVVFMLLGKVIYSF 253


>gi|262394911|ref|YP_003286765.1| putative permease [Vibrio sp. Ex25]
 gi|262338505|gb|ACY52300.1| predicted permease [Vibrio sp. Ex25]
          Length = 251

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 94/261 (36%), Gaps = 26/261 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +   S ++ TL+ L G G GL+  P+L            +   VA+GT         +
Sbjct: 7   LTLFFGSLIANTLASLSGGGAGLLQFPLLIFL--------GLPFSVALGTHKVASVALGL 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   H + GTI  K+    I    I  V+ + +I  +      K      L +GI    
Sbjct: 59  GAASTHLKAGTIKWKVALYLIVSGSIGVVLGANLIVQIPDGMAEKMLGSMILALGIYSRF 118

Query: 144 RDRLYCE-----RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
           +  L        R      +  +  M+ G ++G+L  G G+   L ++ ++G +  +A A
Sbjct: 119 KKSLGQSEIIRNRHPIGWVIGGVGLMLIGIINGSLTAGSGLLVTLFLVRWFGYNYKQAVA 178

Query: 198 -TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T   V         +  + +G             ++   + ++L  S L   L    + 
Sbjct: 179 YTMICVGLFWNGIGGIAVVQAGAP-----------IHWAWLPVLLLSSFLGGSLGAWAAT 227

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
               + + I F ++ F+    
Sbjct: 228 RYSNRVIKIAFEILTFSVGIK 248


>gi|104780986|ref|YP_607484.1| hypothetical protein PSEEN1839 [Pseudomonas entomophila L48]
 gi|95109973|emb|CAK14678.1| conserved hypothetical protein; putative membrane protein
           [Pseudomonas entomophila L48]
          Length = 261

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 52/273 (19%), Positives = 96/273 (35%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             +A  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   FTIAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPAT----AVGTDLLYAAITKASG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
              H R+  I+ KI             +T   +S +          + +  A+  +L  +
Sbjct: 60  VWVHGRNKNIDWKITGWLSLGSVPAAALTLWFLSTLHTDTTALNAIIKQGLAVVLILTAL 119

Query: 140 LMLKRDRLYC-----------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + RL                   N +  I G+V G +     +G G      L +L
Sbjct: 120 AILFKSRLQAFASKHTGDHYHLSDRSLNILTVITGVVLGVMVTLTSIGAGALGTVALFLL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +          +G G  G+     G ++   +  +L  S+ 
Sbjct: 180 YPFLVTRRLVGTEIAHAVPLTL-------VAGLGHAGM-----GNMDWSLLGYLLLGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + L+  I  + L    + ++    +  A
Sbjct: 228 GIYLGSHLTGRISDRVLRPCLATMLLLIGYKLA 260



 Score = 40.8 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 28/57 (49%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
            ++   I G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +
Sbjct: 4   GSFGFTIAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKASGV 60



 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 42/120 (35%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + G +  L  +G G +    L   +  +           +GT +    P ++
Sbjct: 148 ILTVITGVVLGVMVTLTSIGAGALGTVALFLLYPFL------VTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G ++  +L   +        + S +   +    L    A   LL+G  +  
Sbjct: 202 VAGLGHAGMGNMDWSLLGYLLLGSLPGIYLGSHLTGRISDRVLRPCLATMLLLIGYKLAF 261


>gi|332666410|ref|YP_004449198.1| hypothetical protein Halhy_4485 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332335224|gb|AEE52325.1| protein of unknown function DUF81 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 253

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 99/262 (37%), Gaps = 25/262 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +    +A+ ++G +  + G GGGL+  P +   F    +         +GT+       +
Sbjct: 1   MIYACLAALMAGFVDAIVG-GGGLIQAPAMFILFPQFSVPRI------IGTNRFASFMGT 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++  ++ R   I  + +          + + +   S +    L     +  + + +   
Sbjct: 54  AVAAWQYSRKVEIPWRTVLYGGVGAGAMSFLGARFSSLISPEVLKPIILVLMVAIAVYTY 113

Query: 143 KRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            +  L  E +F        +V  + GM+ GF +G +G G G       +   G +    +
Sbjct: 114 LKKNLGHEEQFRVAVHLIPWVGLLVGMICGFYNGFVGPGTGSLLVFGFVSLIGYNFLMGS 173

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A S  ++ +    +L+  +              G+V+    + ++  +++ + L ++ + 
Sbjct: 174 AISKFINVVADVFSLIFFLAQ------------GYVSFEIAIPMMICNMIGSYLGSRTAI 221

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
           + G  ++ + F  ++ +    F
Sbjct: 222 LRGNGFVRLFFLCVIGSLLLRF 243


>gi|310779874|ref|YP_003968206.1| protein of unknown function DUF81 [Ilyobacter polytropus DSM 2926]
 gi|309749197|gb|ADO83858.1| protein of unknown function DUF81 [Ilyobacter polytropus DSM 2926]
          Length = 246

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 97/262 (37%), Gaps = 27/262 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
               + + + ++G ++ + G GGG+ ++  L            I + + +GT+       
Sbjct: 2   IYFFLAIGALIAGIVTAMAG-GGGIFIITFLMML--------EIPIKIVIGTNRVSACLD 52

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  S   + + G ++ +  K  I    + TV+ S ++  ++   + +   +  L + I M
Sbjct: 53  NATSSYNYYKKGKLDTEFFKYAIIPAFLGTVIGSKLLVLLNAKIVERLIPMILLALVIRM 112

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVT-----GFLSGALGVGGGIFTNLLMLF-YGASIYKA 195
               +   E +F     K I   +      G   G  G+  G F  L +++       KA
Sbjct: 113 FVNKKAGLENEFEGFTRKNIIKGIIVTFLMGIYMGFFGLAIGNFFTLALVYVLKFDFLKA 172

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            AT   ++  +   ++++    G             ++    + +    ++ + L +  +
Sbjct: 173 VATVKPINFFMGLVSVVIYAMEGI------------IDWKIAIFVTAFRVIGSKLGSNYA 220

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
              G K +   F ++   T F 
Sbjct: 221 SEKGAKAVKPIFLLLCVFTVFK 242


>gi|148252390|ref|YP_001236975.1| putative permease [Bradyrhizobium sp. BTAi1]
 gi|146404563|gb|ABQ33069.1| putative permease [Bradyrhizobium sp. BTAi1]
          Length = 308

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 96/307 (31%), Gaps = 56/307 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   I L++      G +SG+FG+GGG +M P+L            I   V
Sbjct: 1   MQIYLPIADIPVNIFLLLAMGAAVGFVSGMFGIGGGFLMTPLLIFV--------GITPAV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH--------- 120
           A+ +    IA +S    + + R   I+  +    +    + T +     +          
Sbjct: 53  AVASVSSHIAASSFSGALSYWRRRAIDPSLALVLMIGGTLGTALGVSTFTLLRSLGQLDL 112

Query: 121 ---VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV------------------- 158
              +    L  +        G+  + R R                               
Sbjct: 113 MIALSYVALLTSVGGVMFWEGLRAIMRARQGALPTVRRPGSHVWIHGLPLKMRFKRSKIY 172

Query: 159 -----KYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G++ GFL   +G+GGG     L+++           TS  ++      A +
Sbjct: 173 VSVIPVIGIGLLIGFLGAVMGIGGGFILVPLLIYILRVPTSTVIGTSMVLTLATMMIATM 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           +   S   ++ +             LI++   +       +   MI  + L +   +++ 
Sbjct: 233 LHAVSNHLVDAVLA-----------LILMVGGVTGAQFGARAGQMIRGEQLRLLLGLLIL 281

Query: 273 TTSFVFA 279
                FA
Sbjct: 282 AVGIRFA 288


>gi|313675258|ref|YP_004053254.1| hypothetical protein Ftrac_1151 [Marivirga tractuosa DSM 4126]
 gi|312941956|gb|ADR21146.1| protein of unknown function DUF81 [Marivirga tractuosa DSM 4126]
          Length = 271

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 8/122 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LIIV   + G L+GL G GGG +++P L            + M  A+GTSL +IA  S++
Sbjct: 154 LIIVEGVVVGALTGLVGAGGGFLIIPALVVL-------AKLPMKEAVGTSLLIIAAKSLI 206

Query: 85  SFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            F+   + G  I+   L  +  +      + + + + +D   L K F  F L+MG +M+ 
Sbjct: 207 GFIGDIQSGGDIDWMFLTIFTAIAGAGIFIGTYLSNLIDGQKLKKGFGWFVLIMGSVMIY 266

Query: 144 RD 145
           ++
Sbjct: 267 KE 268



 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 93/254 (36%), Gaps = 40/254 (15%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VPVL     +  +        A   SL ++  +S++  + + + G +N K    +   
Sbjct: 29  LTVPVLVYLLGISPV-------TATAYSLFIVGFSSLVGGLSYAKKGLVNYKTGIVFTIP 81

Query: 107 LPITTVVTS-LMISHVDKSF-------------LNKAFAIFCLLMGILMLKRDRLYC--- 149
             I+  +T  L++  + +++             +   FA+  +     M+K  +      
Sbjct: 82  AFISVYLTRLLLVPALPETWFVVGGLEITKSIGIMVIFAVLMIAASYSMIKDKKALKKEL 141

Query: 150 ----ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSA 204
                 K  +  +  + G+V G L+G +G GGG      L++     + +A  TS  + A
Sbjct: 142 KEVKGSKKFNYPLIIVEGVVVGALTGLVGAGGGFLIIPALVVLAKLPMKEAVGTSLLIIA 201

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
             +    +  I SG  ++ +         +     I    I    + T LS +I  + L 
Sbjct: 202 AKSLIGFIGDIQSGGDIDWM--------FLTIFTAIAGAGIF---IGTYLSNLIDGQKLK 250

Query: 265 IGFSMIMFTTSFVF 278
            GF   +     V 
Sbjct: 251 KGFGWFVLIMGSVM 264


>gi|225024948|ref|ZP_03714140.1| hypothetical protein EIKCOROL_01837 [Eikenella corrodens ATCC
           23834]
 gi|224942279|gb|EEG23488.1| hypothetical protein EIKCOROL_01837 [Eikenella corrodens ATCC
           23834]
          Length = 255

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 94/263 (35%), Gaps = 24/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L+++  FL+G +    G GGGL+ +P L           +  +   +GT+       +
Sbjct: 5   FILLLITGFLAGLMDAAVG-GGGLLQLPALFGVL-----PPATPVPTVLGTNKAASFAGT 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +  +  R   +  K+L     +    +   + ++++V   ++  A  +  + M +   
Sbjct: 59  FTAAGQFARRLQLPWKMLLPAGVLAFAASFAGAKLVAYVPVQYMKPAMLVIMVAMFVYTF 118

Query: 143 KRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKAT 196
            R  L    +       +  +   +G   GF  G  G G G     + + F+      AT
Sbjct: 119 FRKDLGQTERTHALTRGEMLLGTAFGAAIGFYDGLFGPGTGSLLAFVFVRFFAYDFLTAT 178

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++ +    AL   I S              V     L +   ++       KL+ 
Sbjct: 179 ACAKVINLMTNLAALSFFIPSQ------------HVLWHWALPLAAANLSGGFCGAKLAV 226

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
           + G ++L  GF  ++      FA
Sbjct: 227 LGGSRWLRYGFMALLCLLIGNFA 249


>gi|332187959|ref|ZP_08389691.1| hypothetical protein SUS17_3087 [Sphingomonas sp. S17]
 gi|332011960|gb|EGI54033.1| hypothetical protein SUS17_3087 [Sphingomonas sp. S17]
          Length = 259

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 47/201 (23%), Positives = 78/201 (38%), Gaps = 11/201 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +++  + G   G+ G GG ++ +P+L     +         HVA+GTS   +A  + 
Sbjct: 6   ILTLISGVVVGFTLGVIGGGGSILALPLLLYVVGMKDP------HVAIGTSALAVAANAF 59

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + ++H R GT+       +     I  ++ S +   V    L   FA   +++G+ ML+
Sbjct: 60  ANLIQHARAGTVKWPCALVFGASGVIGALIGSTLGKMVAGQHLLVLFAGVMIVVGVSMLR 119

Query: 144 RDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
                         P        G++ G LSG  G+GGG      +ML  G  I  A  +
Sbjct: 120 GKSGGGDPGVRITRPIAVRLVAIGLLAGLLSGFFGIGGGFLIVPGIMLGIGMPILNAVGS 179

Query: 199 SAGVSALIAFPALLVRIYSGW 219
           S            L    SG 
Sbjct: 180 SLFSVGTFGSATALNYALSGL 200


>gi|332290067|ref|YP_004420919.1| Sulfite exporter TauE/SafE [Gallibacterium anatis UMN179]
 gi|330432963|gb|AEC18022.1| Sulfite exporter TauE/SafE [Gallibacterium anatis UMN179]
          Length = 254

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 90/239 (37%), Gaps = 25/239 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   ++ + + ++G +  + G GGGL+ +P L  A        +     A G S     
Sbjct: 5   LDIYAILFLLAGIAGFIDAIAG-GGGLITIPALLAAGLPPAAALATNKLQASGGS----- 58

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                + +   R   ++++ +   I       ++ ++ +  +D S +     I  L++G+
Sbjct: 59  ---FSASLYFVRKKAVDLRTVWKMIIGTFSGAMIGTIAVQLIDASVIKSLLPILVLVVGL 115

Query: 140 LMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
             L   +L  +   ++              GF  G  G G G       +   G ++ KA
Sbjct: 116 YFLFSPKLGEKDCHQRLSFTAFALAAAFPIGFYDGFFGPGTGSFLCVAFVTLLGFNLAKA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           TA +  ++    F +L+  I  G        W+LGFV       ++    L   L  K+
Sbjct: 176 TAHAKILNFTSNFTSLVFFILGG-----EVYWTLGFV-------MMIGGFLGARLGAKM 222


>gi|315222540|ref|ZP_07864429.1| hypothetical protein HMPREF0813_01304 [Streptococcus anginosus
           F0211]
 gi|315188226|gb|EFU21952.1| hypothetical protein HMPREF0813_01304 [Streptococcus anginosus
           F0211]
          Length = 278

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 97/291 (33%), Gaps = 50/291 (17%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++ YI  + +    +G L  L G+GGG+V+ PVL+  F        + +  A+G S+  +
Sbjct: 1   MLTYIFTMTLVGIFAGILGALLGLGGGIVITPVLTLLF-------GVDIKYAVGASIIAV 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS  S + + +   +N++I         +   V +++    D   L   +    L   
Sbjct: 54  LATSSGSAIAYLKDDMLNLRIAMFLEIFTTLGAFVGAMLSVITDSQVLFLLYGALMLFQA 113

Query: 139 ILMLKRDRLY------------------------------CERKFPDNYVKYIWGMVTGF 168
             M ++                                   + +  +     +     G 
Sbjct: 114 FNMYQKIHDKKDNQSVSHNDAIAEKLNLGGEYFDKGLNKTIKYQVTNVPGGSVVMFFAGV 173

Query: 169 LSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           +S  LG+G G F  L M       +  ++ATS  +  +    + +  ++ G     L   
Sbjct: 174 MSALLGIGAGAFKVLAMDTVMKMPLKASSATSNFMMGVTGTASAIFYLFVGQINPVLVT- 232

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                     L +L  S     + +++   +  K L   F + +       
Sbjct: 233 -------PIALGVLAGSF----IGSRIMPYVPVKVLRWIFLVALLALGVQM 272



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V  F +G +S L G+G G   V  +    +       + +  +  TS  ++  T   S +
Sbjct: 166 VVMFFAGVMSALLGIGAGAFKVLAMDTVMK-------MPLKASSATSNFMMGVTGTASAI 218

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +   G IN  ++      +   + + S ++ +V    L   F +  L +G+ M  R
Sbjct: 219 FYLFVGQINPVLVTPIALGVLAGSFIGSRIMPYVPVKVLRWIFLVALLALGVQMFIR 275


>gi|228944104|ref|ZP_04106483.1| integral membrane protein [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228815493|gb|EEM61735.1| integral membrane protein [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 256

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 76/206 (36%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +     I L+I   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLPPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G ++ KI+   I +  I  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAIYFIRSGKVDFKIVGKLIPLTVIGAVAGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +        +         + +   ++ GF  G  G G   F     L  G 
Sbjct: 113 FIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTESFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|224475555|ref|YP_002633161.1| putative permease [Staphylococcus carnosus subsp. carnosus TM300]
 gi|222420162|emb|CAL26976.1| putative permease [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 300

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 90/258 (34%), Gaps = 23/258 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +I    F +  + G  G+G G+    +L            +   +   T       T+
Sbjct: 4   LLIIAFVGFFAQLIDGSLGMGFGVTSSSILLTL--------GLTPAIVSATIHFSEIATT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H      + K++        +   + + ++SH+  + +  A A+F + +GI +L
Sbjct: 56  AASGISHMSFANADKKLILRLAVPGSMFAFIGAALVSHLHANIVKPAVALFLISIGIYIL 115

Query: 143 KRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKAT 196
            +     +R       P N +      V GFL+   G G G     +L+    A++    
Sbjct: 116 YQFAFKGKRSYTDGPPPSNKLLIPLSSVAGFLTAIGGGGWGPVNTSVLVSRRNANVRHVI 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            + +     +   A +  +             L  +N G V  +    +   P A  +  
Sbjct: 176 GSVSVSEFFVTIAASVSFLIF---------LRLDQINWGLVAALSIGGVAAAPFAAWMVK 226

Query: 257 MIGKKYLTIGFSMIMFTT 274
           +I  + L I    ++  T
Sbjct: 227 VIPVEVLGIFVGGLIIFT 244


>gi|303325558|ref|ZP_07356001.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
 gi|302863474|gb|EFL86405.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
          Length = 246

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 83/251 (33%), Gaps = 22/251 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++       G L+G  GVGG  V+VP        + +   +  H AMGTSL  +   
Sbjct: 1   MLAVLYAFCLAVGFLTGATGVGG--VLVP------PALVLLSGLETHTAMGTSLAAMFFL 52

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +++      R G I  +     +    +     +   + +D   L        +L G+  
Sbjct: 53  TLLGTWMFWRLGLIRWREALPLVLGGGLAGWPGAWCNARLDAGPLIYILGAVIVLAGLCA 112

Query: 142 LKRDRLYCERKFP--DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
           L+      +           +  G  TGF++G  GVGGG+ +   M+  G +   A A S
Sbjct: 113 LRPPTARDKGNLFWHGKAGLFGIGAATGFVAGLTGVGGGVLSVPWMIIVGYAPLTAVALS 172

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                L      L  +  G+    L P             +    +         +  + 
Sbjct: 173 MPFQVLATLSGSLANVTGGYLDYNLLP------------GVTLACLFGFWRGVAAARRMS 220

Query: 260 KKYLTIGFSMI 270
              L     ++
Sbjct: 221 PLLLRRAIGVV 231


>gi|221069473|ref|ZP_03545578.1| protein of unknown function DUF81 [Comamonas testosteroni KF-1]
 gi|220714496|gb|EED69864.1| protein of unknown function DUF81 [Comamonas testosteroni KF-1]
          Length = 252

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 90/250 (36%), Gaps = 25/250 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ +AS L+G +  + G GGGL++VP +  AF       +       GT+       + 
Sbjct: 4   ILVSLASALAGFVDAIVG-GGGLILVPAMFAAF------PTTTPATLFGTNKSAAVWGTA 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +S  +  +   I    L   I    +   + +  ++ +   FL K      L +    L 
Sbjct: 57  ISAWQFSKRVHITWATLLPAIGTTLVGAFLGAWAVTLISPDFLRKLLPFILLGVLGYTLA 116

Query: 144 RDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATA 197
           +  L  + +       +       G++ GF  G  G G G F   L +   G     A+A
Sbjct: 117 KKELGRDHEPRLAGRTEMLTACAIGLLIGFYDGFFGPGTGSFFVFLFVRLLGYDFLNASA 176

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  ++      ALL+                G V     + +   ++L + L T ++  
Sbjct: 177 NAKLLNLASNAAALLLFTLK------------GHVWWHFAIPLAVANVLGSMLGTWMALR 224

Query: 258 IGKKYLTIGF 267
            G  ++   F
Sbjct: 225 HGTGFVRAIF 234


>gi|89099437|ref|ZP_01172313.1| hypothetical protein B14911_19705 [Bacillus sp. NRRL B-14911]
 gi|89085823|gb|EAR64948.1| hypothetical protein B14911_19705 [Bacillus sp. NRRL B-14911]
          Length = 285

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 50/207 (24%), Positives = 76/207 (36%), Gaps = 18/207 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++Y+  +++   +S  LSG FGVGGG ++ PVL                 A+ TSL    
Sbjct: 1   MEYLLFLLLGGVIS-VLSGFFGVGGGFILTPVLLLI--------GFAPLEAIATSLFFSI 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL-----NKAFAIFC 134
            TS+     H R   I  K          + T     ++  + +  L        + +  
Sbjct: 52  GTSLSGIGAHFRLKNILWKEGAILGVSGMLATQAAKPLVLFLSEKGLDATVIPACYIVLL 111

Query: 135 LLMGILMLKRDRLYCERKF---PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGA 190
                 M ++ +   E+     P      + G   GF+S ALGVGGG     L + F G 
Sbjct: 112 SYFAFTMFRQGKKTGEQSREGRPSLAGMLLIGFSGGFVSAALGVGGGFIMVPLSIAFLGL 171

Query: 191 SIYKATATSAGVSALIAFPALLVRIYS 217
              KA  TS     LI     L    +
Sbjct: 172 QPRKAVGTSLFAVLLIVSTGFLSYASA 198



 Score = 40.8 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++  F  G +S   GVGGG +MVP+      L           A+GTSL  +       
Sbjct: 139 MLLIGFSGGFVSAALGVGGGFIMVPLSIAFLGLQP-------RKAVGTSLFAVLLIVSTG 191

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           F+ +     I+       +    + +   + + +      ++   +   +   + ++ +
Sbjct: 192 FLSYASAVEISYLTAILLVAGGLVGSQAGAWLTNFYKNKDISLLLSGLYIATLLSVVFK 250


>gi|89092710|ref|ZP_01165663.1| hypothetical protein MED92_15428 [Oceanospirillum sp. MED92]
 gi|89083222|gb|EAR62441.1| hypothetical protein MED92_15428 [Oceanospirillum sp. MED92]
          Length = 261

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 94/272 (34%), Gaps = 34/272 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
                A  + G + GL G+GGG +M P+L   F   GI       VA+ T L   A T  
Sbjct: 3   LAYSFAGLVVGFIVGLTGIGGGALMTPILIVVF---GIPPV----VAVSTDLLYAAITKC 55

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMG 138
              + + R   +  +++   +      +++T   +  +D        +N    +  +L  
Sbjct: 56  GGMISYARKKLVEWRVVLFMLLGSIPGSLLTIRYLQGLDGLEQIEHLMNLTLGVSLVLTS 115

Query: 139 ILMLKRDRLY------------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
           I +  R+++                +     V  + GM+ G L     VG G     L++
Sbjct: 116 IAVFLRNKIRNQAMKWQHTSAASHARKWRPVVTVLMGMILGALVTLSSVGAGALGTALLI 175

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
                +          S        LV       + G   + +G V++  ++ ++  S+ 
Sbjct: 176 LLYPRM----------SMPTIVGTDLVHAVVLTSIAGAGHYQMGSVDMDLLIYLIIGSLP 225

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              L + +   I  K +      I+F     F
Sbjct: 226 GVFLGSHIGTRISPKVMQPIMGSILFAIGLRF 257



 Score = 40.8 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 42/116 (36%), Gaps = 6/116 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  L  VG G +   +L   +  M       M   +GT L      + ++ 
Sbjct: 149 VLMGMILGALVTLSSVGAGALGTALLILLYPRM------SMPTIVGTDLVHAVVLTSIAG 202

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             H + G+++M +L   I        + S + + +    +          +G+  +
Sbjct: 203 AGHYQMGSVDMDLLIYLIIGSLPGVFLGSHIGTRISPKVMQPIMGSILFAIGLRFV 258


>gi|241765819|ref|ZP_04763758.1| protein of unknown function DUF81 [Acidovorax delafieldii 2AN]
 gi|241364267|gb|EER59429.1| protein of unknown function DUF81 [Acidovorax delafieldii 2AN]
          Length = 252

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 92/253 (36%), Gaps = 25/253 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I +AS L+G +  + G GGGLVMVP L  AF   G   +      +GT+       + 
Sbjct: 4   IFITLASLLAGFVDAIVG-GGGLVMVPALFAAFP--GAPPATL----LGTNKAASVWGTA 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+  ++ R   +    +        + +   +  ++ +   FL K   +  L +    L 
Sbjct: 57  MATWQYSRRVQVRWSAMLPAAAAGFVGSFGGAWAVTVMSAEFLRKLLPLVLLGVLAYTLA 116

Query: 144 RDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATA 197
           +  L            +       G++ GF  G  G G G F   L +   G     A+A
Sbjct: 117 KKELGRHHTPRFEGRAEALAAGAIGLLIGFYDGFFGPGTGSFFVFLFVRLLGYDFLNASA 176

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           ++  ++      A+ +              S G V     + +   ++  + L T L+  
Sbjct: 177 SAKLLNCATNIAAIALFA------------SKGHVWWHYAVTLAVANVAGSLLGTHLALK 224

Query: 258 IGKKYLTIGFSMI 270
            G  ++   F ++
Sbjct: 225 HGTGFVRGIFIVV 237


>gi|167625264|ref|YP_001675558.1| hypothetical protein Shal_3353 [Shewanella halifaxensis HAW-EB4]
 gi|167355286|gb|ABZ77899.1| protein of unknown function DUF81 [Shewanella halifaxensis HAW-EB4]
          Length = 253

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 98/260 (37%), Gaps = 25/260 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +     + + + +SG      G GGGL+ +P L  A         + + + +GT+   + 
Sbjct: 3   ITEYLYLGIIALISGVAQATVG-GGGLLQLPALFNAM------PGVAIPIVIGTNKLALL 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            + + +   +     +   ++   I    I   + S ++ HV +++      +  +++ I
Sbjct: 56  ASGINNVRRYAFSMDLPWPLIVPAIISGCICAFIGSSLLDHVSEAWFKPILLVIMIVLAI 115

Query: 140 LMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIY 193
              +   +  +   P        V  + G + GF  G  G     F  L  +  +G    
Sbjct: 116 YTFRNKEMGEKESEPLFTHHQRGVSAVMGAMIGFYQGMFGPATLTFAILGNIRAFGMDFL 175

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A A+S  +S L    AL+  I  G+    L              I+   ++  + + T+
Sbjct: 176 HAMASSQVLSTLFNVSALVWFISHGYFDIKL------------AAIMTIGTLAGSIIGTR 223

Query: 254 LSYMIGKKYLTIGFSMIMFT 273
           ++ + G + + + F +++  
Sbjct: 224 IALIGGNRVIKVLFVIMLLI 243


>gi|332283736|ref|YP_004415647.1| hypothetical protein PT7_0483 [Pusillimonas sp. T7-7]
 gi|330427689|gb|AEC19023.1| hypothetical protein PT7_0483 [Pusillimonas sp. T7-7]
          Length = 258

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 80/215 (37%), Gaps = 1/215 (0%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  L+G+   +    A GT+L ++ P  +++  ++ ++  I++           + T + 
Sbjct: 32  AIPLLGLAAGMDQQEAQGTALVMVLPAVLVTVRKYNQNAKIDIGAAAAGALAAIVFTWLG 91

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALG 174
           + +   +D   + + +A+F L + +  + +              +       G+    +G
Sbjct: 92  ARLALGIDPVLMRRIYAVFVLFIAVFYMYQSLRGSRVGSSSPARRSTQEFHKGWF-ALIG 150

Query: 175 VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           VG G+      +           T   +S   A    L  I  G  +  L   + G  + 
Sbjct: 151 VGAGLIGGFFGVGGSVMAVPVLTTVFRLSQTGAQALALTMIIPGTTVALLTYTAHGQADW 210

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
              L +   SI + P   KL+Y + +  L + F+ 
Sbjct: 211 LIGLPLALGSIFMVPYGVKLAYALPEPRLKLIFAC 245


>gi|167749752|ref|ZP_02421879.1| hypothetical protein EUBSIR_00719 [Eubacterium siraeum DSM 15702]
 gi|167657235|gb|EDS01365.1| hypothetical protein EUBSIR_00719 [Eubacterium siraeum DSM 15702]
          Length = 258

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 96/248 (38%), Gaps = 25/248 (10%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           +G  G+    V+ P+L      +GI+     + A+G +L      S +S   + ++  ++
Sbjct: 21  TGFAGMSAAAVITPMLV---TFLGIEP----YTAVGIALASDVLASAVSAYTYGKNKNLD 73

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN 156
           +K     +  + I TVV S + S V    +        LL+GI  + R  +  +      
Sbjct: 74  IKNGLVMMITVLIFTVVGSFVSSLVPSVAMGNFSVFMTLLLGIKFIVRPVMTTKTDMSAR 133

Query: 157 YVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFP 209
             K       I G++ GF+ G +G GGG+   LL+    G  +  A  TS  +    A  
Sbjct: 134 SAKSVLIKSIICGIIVGFICGFIGAGGGMMMLLLLTSVMGYELKTAVGTSVFIMTFTALT 193

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             +     G   + LP            ++ +  +++   +A K++     + L     +
Sbjct: 194 GSVSHFAIGGMPDILP-----------FVLCIVFTLVFARIAAKIANKASPETLNRVTGI 242

Query: 270 IMFTTSFV 277
           I+     V
Sbjct: 243 ILVILGIV 250


>gi|83816202|ref|YP_444473.1| domain of unknown function, putative [Salinibacter ruber DSM 13855]
 gi|294506221|ref|YP_003570279.1| permease [Salinibacter ruber M8]
 gi|83757596|gb|ABC45709.1| Domain of unknown function, putative [Salinibacter ruber DSM 13855]
 gi|294342549|emb|CBH23327.1| Predicted permease [Salinibacter ruber M8]
          Length = 254

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 85/231 (36%), Gaps = 16/231 (6%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL                +A+  SLG++A  S++  +     G ++ + +  +     
Sbjct: 27  VPVLVYLV-------GEPSKLAIAESLGIVALISLVGAIPLALRGRVSWRTVGWFGGPGI 79

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW--GMVT 166
           +   V + +   +  +     FA+  L   +LM +R       +    + K +     V 
Sbjct: 80  VGAYVGASLSQLMSGAVQLAIFAVVMLGAAVLMFRRTPSELVDEPDRAFWKVMVDGLGVG 139

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
                    GG +    L++  G S++ A  TS  + AL +    +  +       GL  
Sbjct: 140 VLTGLVGVGGGFLIVPALVVLGGLSMHLAVGTSLAIIALKSVSGFVKYLDV-MEAAGLS- 197

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                ++   VL+   I I+ + +  +L   + +  L  GF++ +     V
Sbjct: 198 -----IHWDLVLVFSGIGIVGSFVGGRLGAYVPQARLKRGFAIFLVLMGIV 243



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 55/103 (53%), Gaps = 12/103 (11%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH-----RRHGTINMKILKD 102
           +VP L            + MH+A+GTSL +IA  SV  F+++         +I+  ++  
Sbjct: 153 IVPALVVL-------GGLSMHLAVGTSLAIIALKSVSGFVKYLDVMEAAGLSIHWDLVLV 205

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           +  +  + + V   + ++V ++ L + FAIF +LMGI++L ++
Sbjct: 206 FSGIGIVGSFVGGRLGAYVPQARLKRGFAIFLVLMGIVILGQN 248


>gi|225075837|ref|ZP_03719036.1| hypothetical protein NEIFLAOT_00853 [Neisseria flavescens
           NRL30031/H210]
 gi|224952783|gb|EEG33992.1| hypothetical protein NEIFLAOT_00853 [Neisseria flavescens
           NRL30031/H210]
          Length = 262

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 92/261 (35%), Gaps = 26/261 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  + + + ++G +  + G GGGL+ +P L     L GI        A+ T+    A  
Sbjct: 6   IILALGLVAMVAGFIDAIAG-GGGLITLPALL----LAGIPPVS----AIATNKLQAAAA 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  + +   R G I+ K          +  VV +L +S V K  L     +  + + +  
Sbjct: 57  TFSATVSFARKGLIDWKKGLPIAAASFVGGVVGALSVSLVSKDILLAVVPVLLIFVALYF 116

Query: 142 LKRDRLYCERKFPDNYVKYIWGM----VTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
           +   +L   ++       +++G+    + GF  G  G G G  F    ++  G  +  A 
Sbjct: 117 MFSPKLDGSKEGKARMSFFLFGLTVAPLLGFYDGVFGPGVGSFFLIAFIVLLGCKLLNAM 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           + +   +      +L V +  G             +       +   + +   L  + + 
Sbjct: 177 SYTKLANVACNLGSLSVFLLHGS------------IIFPIAATMAVGAFVGANLGARFAV 224

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G K +     +I    +  
Sbjct: 225 RFGSKLIKPLLIVISILMAVK 245


>gi|170758240|ref|YP_001788188.1| hypothetical protein CLK_2259 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169405229|gb|ACA53640.1| putative membrane protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 250

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 100/264 (37%), Gaps = 27/264 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L+  A FL+  +  + G GGGL+ +P     + + G+      H+A+GT+     
Sbjct: 1   MFTILLLCFAGFLAAIIDAIAG-GGGLITIPA----YLMAGVPP----HMALGTNKLCAT 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S+ S     + G IN+K+ K       I  ++    +  +D + LN    I  +++ +
Sbjct: 52  CSSLTSCFNFAQSGKINLKLFKILAPFSLIGAILGVNAVMGIDANCLNIIVLILLVIVAL 111

Query: 140 LMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIY 193
             L    +  +  F      +  +        GF +G  G G G      L+  +     
Sbjct: 112 FSLFSKNVGLKNNFHGLNKKNTLLGIFLSFSIGFYTGFFGPGTGAFMMIGLIGVFKFDFL 171

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+  S  ++ +    +L++  +               +N    + +    I+   L TK
Sbjct: 172 GASGNSKSLTTISNMASLILFAFHRQ------------INYKLAIPVSLAMIIGAKLGTK 219

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           ++   G K +   F+ I    +  
Sbjct: 220 IALNKGSKVIKPVFTTISILIAIK 243


>gi|225618982|ref|YP_002720208.1| transporter/membrane [Brachyspira hyodysenteriae WA1]
 gi|225213801|gb|ACN82535.1| transporter/membrane [Brachyspira hyodysenteriae WA1]
          Length = 255

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 104/266 (39%), Gaps = 29/266 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + +II+   ++G +    G GGGL+ +P     + + GI      H A+ T+     
Sbjct: 4   IENLIIIIIGCSIAGFVDAAAG-GGGLISLPA----YLIAGIPP----HTALATNKFTST 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +++S     ++G +  K++K  I +  + ++V   +I  +D   L     I  L +GI
Sbjct: 55  SGAIVSAFTFFKNGKLTSKLIKFLIPMTILGSIVGVQVIVLIDAKILQPLIMILILAVGI 114

Query: 140 LMLKRDRLYCERKFPDNYVKY-------IWGMVTGFLSGALGVGGGIFTNLLM-LFYGAS 191
             L       E KF +N +K         +  + GF     G G G F  +   L++   
Sbjct: 115 YTLFSKTFGTENKFDENNLKTKNYIIGMFFAFLLGFYDAVFGPGTGSFLIMFFVLYFKMD 174

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
              A+  +  ++      +L++    G             VN  A + ++P  +  T   
Sbjct: 175 FLLASGNAKALNFTSNLCSLIIFAIEGK------------VNYMAGIFVIPFIMTSTYFG 222

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
            K +   G K +   F  I   T+  
Sbjct: 223 AKFAIKKGIKVIKPIFVTISLLTTLK 248


>gi|225574087|ref|ZP_03782698.1| hypothetical protein RUMHYD_02151 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038687|gb|EEG48933.1| hypothetical protein RUMHYD_02151 [Blautia hydrogenotrophica DSM
           10507]
          Length = 258

 Score = 62.8 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 93/267 (34%), Gaps = 25/267 (9%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++  I +   A   +G  +G  G+    V+ P+L            +  ++A+G +L  
Sbjct: 2   ELLLSILVTFFAGMGAGLGTGFAGMSAAAVITPMLITFL-------GVKPYIAVGIALSS 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
               S +S   + ++  +++K     +  + I TVV S + S V  + +     I    +
Sbjct: 55  DVLASAVSAYTYGKNKNLDIKNGLIMMASVLIFTVVGSYVSSLVPSAAMGNFSVIMTFFL 114

Query: 138 GILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGV-GGGIFTNLLMLFYGA 190
           GI  + R  +  +        +       + G+V GF+ G +G  GG +   LL      
Sbjct: 115 GIKFIVRPVMTTKESMGSVSARKHAIQSMLCGIVIGFICGFIGAGGGMMMLLLLTTVLNY 174

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            +  A  TS  V    A    +     G   +               ++ +  + L   +
Sbjct: 175 ELKTAVGTSVFVMTFTALTGAVSHFLIGGTPD-----------WLIWILCVIFTFLWARV 223

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           A   +     K L     +I+     V
Sbjct: 224 AAVFANKAEPKTLNRVTGIILVVLGIV 250


>gi|257459752|ref|ZP_05624861.1| hypothetical protein CAMGR0001_1068 [Campylobacter gracilis RM3268]
 gi|257443177|gb|EEV18311.1| hypothetical protein CAMGR0001_1068 [Campylobacter gracilis RM3268]
          Length = 246

 Score = 62.8 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 77/230 (33%), Gaps = 21/230 (9%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V+VPV+              +  A+G S+  +  +S+     + +   +++        
Sbjct: 25  TVVVPVMMLF--------GYDVKYAIGISIMQMIFSSIFGSFVNFKSKMLDVAPALVLGL 76

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
                 + +  ++S+    FL     +  ++  I + K              + ++ G+ 
Sbjct: 77  GGFCGALSSGFIVSYFSSKFLLGTLILVQIINLIKLFKTPTEPAGETNKSKILLFLVGLF 136

Query: 166 TGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            G ++ ++G+GG +F   +++ F    I KA +T        +    +     G      
Sbjct: 137 VGAVAISVGIGGAVFVMPILISFLNYDIKKAVSTGLFFVIFSSSAGFISLSAHGL----- 191

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                  V      ++   S+       K S+ IGKK        ++   
Sbjct: 192 -------VYYEIGALLGVGSLAGVYAGVKTSHKIGKKAQKRWMIALIVAI 234


>gi|271963437|ref|YP_003337633.1| membrane protein [Streptosporangium roseum DSM 43021]
 gi|270506612|gb|ACZ84890.1| membrane protein [Streptosporangium roseum DSM 43021]
          Length = 255

 Score = 62.8 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 43/192 (22%), Positives = 73/192 (38%), Gaps = 10/192 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A+ + G   GLFG GG ++MVP+L     + G         A+  SL V+A TS    
Sbjct: 11  VLAAAVVGVTLGLFGGGGSILMVPMLMYIAHVPG-------KAAIAMSLLVVATTSAAGL 63

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK--- 143
           + H R G +  +    +            L+  ++ ++ L   FA   +   I M++   
Sbjct: 64  ISHARAGRVRWRTGLIFGAAGMAGAYAGGLIGPYLPETILLGGFAAMTVATAIAMIRGRS 123

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
           R         P   +     +V          GG +    L+L  G  +  A  TS  V 
Sbjct: 124 RVSAKTGADLPVGRILIDGIVVGVVTGLVGAGGGFLVVPALVLLGGMPMAAAVGTSLLVI 183

Query: 204 ALIAFPALLVRI 215
           A+ +   L   +
Sbjct: 184 AMKSLAGLAGYL 195



 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 7/104 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            ++VP L            + M  A+GTSL VIA  S+     + +  TI+ ++      
Sbjct: 158 FLVVPALVLL-------GGMPMAAAVGTSLLVIAMKSLAGLAGYLQTVTIDWRLAAVVTA 210

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
              +  +    +  HV+   L +AF    L MG+ +L +     
Sbjct: 211 AAVVGGLAGGQLTGHVNPDRLRRAFGWVVLAMGVFVLAQQVPAL 254


>gi|126650858|ref|ZP_01723074.1| hypothetical protein BB14905_05088 [Bacillus sp. B14905]
 gi|126592523|gb|EAZ86541.1| hypothetical protein BB14905_05088 [Bacillus sp. B14905]
          Length = 246

 Score = 62.8 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 75/247 (30%), Gaps = 28/247 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +    +   +  L G GGGL+ +P +            + +H A+G +      ++ 
Sbjct: 4   LLFLFIGIIGNVIGTLVG-GGGLITLPTMMLM--------GVPVHSAIGANKVSNMVSAF 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            SF    +   +    ++  + V  I   +  L  S +    L    AI  L   ++M  
Sbjct: 55  SSFYTIYKRKELAWSEMRPVLLVSLIGGTLGGLFASFMSSQAL-TFIAIILLGFALMMSF 113

Query: 144 RDRLYCERK----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
                   K            + G+  GF  G  G G              S  KA   S
Sbjct: 114 MGGADFGDKELFIMNRKNGPILLGV--GFYDGMFGPGSSTLALYTYAHEKISYIKAVGLS 171

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                 +   A +  I +G             +     LI++  S +   +   L+  + 
Sbjct: 172 RVGVFAMCSGAAITYIATGK------------IEWPLTLILMVGSTIGAQIGIVLARKVN 219

Query: 260 KKYLTIG 266
              + + 
Sbjct: 220 ANQVKLL 226


>gi|218288844|ref|ZP_03493095.1| protein of unknown function DUF81 [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218240933|gb|EED08110.1| protein of unknown function DUF81 [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 256

 Score = 62.8 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 96/251 (38%), Gaps = 26/251 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++ ++ VA +++  +    G GGGL+ +P L       G+  S     A+GT+      +
Sbjct: 8   HMAVLAVAGYVAAFIDSTVG-GGGLISLPALLFV----GLPPSA----ALGTNKFAGTMS 58

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ SF  +   G + +K++     +  I + + + ++  +  SFL     +  +++    
Sbjct: 59  AITSFSSYLLSGKVRLKLVGPLFPLGVIASALGAYIVHQLPSSFLRPFVLVMLVIVAAYT 118

Query: 142 LKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           L +  L               +  +  +  GF  G  G G G F  +  L  G     A+
Sbjct: 119 LWKKDLGLVESIRPLTRKTFALTALLAIGLGFYDGFFGPGTGSFLVMGFLLLGFDFLSAS 178

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++      AL   I            ++G V   A L++    +L     ++ + 
Sbjct: 179 GNARTLNLASNAGALATFI------------AVGAVRYEAGLVLGLSMVLGALTGSRFAI 226

Query: 257 MIGKKYLTIGF 267
             G +Y+   F
Sbjct: 227 RKGARYVRPIF 237


>gi|303231728|ref|ZP_07318451.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302513677|gb|EFL55696.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6]
          Length = 265

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 96/272 (35%), Gaps = 29/272 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D +V +    IV  F +  L  + G GGG++ VP+    F            + +GTSL 
Sbjct: 3   DNIVLFYLFFIVVGFFTAMLGTIIGAGGGIIFVPLFMYWF------PEWSPSMIVGTSLF 56

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   ++   + + +   + +     +        ++ + M           AF  F L 
Sbjct: 57  SVMCNAISGSLAYLKQRKVYISAALIFSVATFPGAIIGAQMSDAFSGPGFKFAFGCFMLC 116

Query: 137 MGILMLKRDRLYCERKFP----------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
              L+  ++      +            +  +     ++ GF+S  LG+GGG+     ++
Sbjct: 117 ASFLIGFKNFGKKGERKEESLTMDQVTYNKPIGIGISIIVGFISSILGIGGGLIHVPALI 176

Query: 187 F-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           +  G   + ATATS  + A+     ++  +     +          + I A       +I
Sbjct: 177 YIMGFPTHLATATSHAILAVSTAVGVITHLVENHIVFN--------IAIPA----SIGAI 224

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                  +++  +  K +    S+ +F  +  
Sbjct: 225 FGAQAGAQIAKRLRAKAILALMSIGVFALAVK 256



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 7/111 (6%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           S + G+GGGL+ VP L               H+A  TS  ++A ++ +  + H     I 
Sbjct: 160 SSILGIGGGLIHVPALIYIMGF-------PTHLATATSHAILAVSTAVGVITHLVENHIV 212

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
             I               + +   +    +    +I    + + ++    +
Sbjct: 213 FNIAIPASIGAIFGAQAGAQIAKRLRAKAILALMSIGVFALAVKLIIGSGI 263


>gi|206889274|ref|YP_002248954.1| hypothetical protein THEYE_A1130 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206741212|gb|ACI20269.1| hypothetical protein THEYE_A1130 [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 414

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 46/129 (35%), Gaps = 9/129 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V+ I   ++ + ++     L G GGG ++ P+L     + G+  ++      GT +  + 
Sbjct: 264 VNVIWPFLLTAAITTF-GVLMGAGGGFILNPILV----MFGLPHTVVA----GTVMPTVL 314

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +       + +   IN K+       +     +   +   +        F    +++ +
Sbjct: 315 FSQGTGIYNYSKIKFINWKLGVTLGLAMLAGGFIGPKLTELITLDQYKFLFGWVLIILSL 374

Query: 140 LMLKRDRLY 148
           LM  +    
Sbjct: 375 LMFWQTTPR 383



 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 40/122 (32%), Gaps = 14/122 (11%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
             ++           +G GGG   N +++ +G   +   A   G        +    IY+
Sbjct: 268 WPFLLTAAITTFGVLMGAGGGFILNPILVMFGLP-HTVVA---GTVMPTVLFSQGTGIYN 323

Query: 218 GWGLNGLPPWS-LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                    +S + F+N    + +    +    +  KL+ +I        F  ++   S 
Sbjct: 324 ---------YSKIKFINWKLGVTLGLAMLAGGFIGPKLTELITLDQYKFLFGWVLIILSL 374

Query: 277 VF 278
           + 
Sbjct: 375 LM 376


>gi|325518224|gb|EGC97985.1| hypothetical protein B1M_43890 [Burkholderia sp. TJI49]
          Length = 283

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 90/267 (33%), Gaps = 49/267 (18%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + VA+F +  L G+ G+  G+ +VP+L+  F        + +  ++G S+  +   S 
Sbjct: 4   LWLFVAAFGASALGGVLGMASGIFVVPLLTLLF-------GVGIQTSIGASIVSVIACSC 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S     +   IN+++         +  +   L+I  V  +FL   FA    +    ML 
Sbjct: 57  SSAASFLKGRLINVRLAIVLETATTLGALTGVLLIGRVPVAFLYALFAGVLAVSAKQMLA 116

Query: 144 RDR-------------------------LYCERKFPDNYVKYIWGM----VTGFLSGALG 174
           R R                             R+      +  +GM      G +S  LG
Sbjct: 117 RRRDASADGPTDAASWASVLRLHASFPDPASGREVRYQVGRVPFGMALMYGAGLISALLG 176

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G+     M       I  ++ATS  +  + A  +                   G ++
Sbjct: 177 IGSGVLKIPAMDTALRLPIKVSSATSNFMIGVTAAASAGAYFVR------------GDID 224

Query: 234 IGAVLIILPISILITPLATKLSYMIGK 260
           +     I   S++   +  +L   +  
Sbjct: 225 MRVAGPIALGSVIGAIVGARLLMRVPA 251



 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 7/110 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G +S L G+G G++ +P +  A +L        + V+  TS  +I  T+  S   +   
Sbjct: 168 AGLISALLGIGSGVLKIPAMDTALRL-------PIKVSSATSNFMIGVTAAASAGAYFVR 220

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           G I+M++         I  +V + ++  V    L   F +  LL+ I ML
Sbjct: 221 GDIDMRVAGPIALGSVIGAIVGARLLMRVPADRLRVFFVVVLLLLAIDML 270


>gi|326800974|ref|YP_004318793.1| hypothetical protein Sph21_3586 [Sphingobacterium sp. 21]
 gi|326551738|gb|ADZ80123.1| protein of unknown function DUF81 [Sphingobacterium sp. 21]
          Length = 265

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 7/120 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I++     G ++GL G GGG +++P L    +L        M  A+GTSL +I+  S+M 
Sbjct: 149 ILLQGIFIGVITGLIGAGGGFLIIPALVNLLKL-------PMKTAVGTSLVIISINSLMG 201

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           F+    H ++    L     +  I  ++ S + + +  + L  AF  F L+MGI ++ ++
Sbjct: 202 FLFSLSHTSVQWGFLLSIAAIAIIGILIGSYLSTKIRANRLKPAFGWFVLVMGIYIIIKE 261



 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 68/184 (36%), Gaps = 26/184 (14%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL   F L  +       +A   SL ++  TSV+    + + G +N+K    +     
Sbjct: 28  VPVLVYLFNLDAV-------LATAYSLFIVGATSVVGSFSYFKKGLVNIKTAIVFGIPSI 80

Query: 109 ITTVVT-SLMISHVDKSF-------------LNKAFAIFCLLMGILMLKRDRLYCERKFP 154
               +T   ++  + +               L   FA+  ++    M+K+D    E    
Sbjct: 81  AAIFLTRHYILPAIPQHVFTIGSYTVTQSILLMVLFAVLMIVASYSMIKKDGQENEEALQ 140

Query: 155 DNYVKY----IWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFP 209
              + Y    + G+  G ++G +G GGG      L+      +  A  TS  + ++ +  
Sbjct: 141 KQSLNYFQILLQGIFIGVITGLIGAGGGFLIIPALVNLLKLPMKTAVGTSLVIISINSLM 200

Query: 210 ALLV 213
             L 
Sbjct: 201 GFLF 204


>gi|325927823|ref|ZP_08189048.1| putative permease [Xanthomonas perforans 91-118]
 gi|325541813|gb|EGD13330.1| putative permease [Xanthomonas perforans 91-118]
          Length = 258

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 66/179 (36%), Gaps = 11/179 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP++      +G+D+    HVA+GTS   +A  ++ +   H R G +       +  
Sbjct: 32  ILAVPLMLYL---VGVDNP---HVAIGTSALAVAANALSNLFVHARRGNVRWPCASVFAL 85

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
                  + S +   VD   L   FA+  +++G+ ML++           +       + 
Sbjct: 86  AGVAGAYLGSSLGKAVDGQRLLALFAVLMVVIGLQMLRKRNAQENAAARISKENAPALVG 145

Query: 166 TGFLSGALGVGGGI-----FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            G L+G      GI         LM   G  +  A  +S    +       +   YSG 
Sbjct: 146 LGTLAGGFSGFFGIGGGFLIVPGLMTATGMPMLAAVGSSLVAMSAFGLTTAVNYAYSGL 204


>gi|319943524|ref|ZP_08017806.1| hypothetical protein HMPREF0551_0652 [Lautropia mirabilis ATCC
           51599]
 gi|319743339|gb|EFV95744.1| hypothetical protein HMPREF0551_0652 [Lautropia mirabilis ATCC
           51599]
          Length = 254

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 97/253 (38%), Gaps = 25/253 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +ASF +G +  + G GGGL+++P L   F               GT+       + 
Sbjct: 4   LIVTLASFAAGLVDAIVG-GGGLILIPALFTTF------PDTSPATLFGTNKSAAVWGTG 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           MS  ++ +       +L        + +++ +  ++ VD SFL +   +  L + +  L+
Sbjct: 57  MSAWQYGQRVRRRWSVLLPAFGCAMLGSLLGAWAVTQVDPSFLRRLLPLVLLAVLVNTLR 116

Query: 144 RDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATA 197
           R  L  E +       +  +  I  +V GF  G  G G G F   L +   G    +A+A
Sbjct: 117 RKDLGTEARNLHTERVETLLMGIIALVIGFYDGFFGPGTGSFFVFLFVRVLGHDFLQASA 176

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  ++      AL +              S G V       +   ++    + ++L+  
Sbjct: 177 NAKVLNMATNLSALGLFA------------STGHVWWQVGAAMAVANVAGALIGSRLALR 224

Query: 258 IGKKYLTIGFSMI 270
            G  ++   F ++
Sbjct: 225 YGAGFVRHAFILV 237


>gi|75762473|ref|ZP_00742337.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74490046|gb|EAO53398.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 195

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 57/118 (48%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  ++++
Sbjct: 80  LAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAIV 132

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           S   H   G ++       I    I   + + + + +  + +     I  +++G  ++
Sbjct: 133 SSATHISLGNVSWIYALILIPGAWIGGKIGAYINTKLSGNAVINLLRITLIILGTRLI 190



 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 69/189 (36%), Gaps = 33/189 (17%)

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC---------ERKFPDNYVKY 160
             +  S     +++   +  F IF + + IL++ RD+L           +R F DN    
Sbjct: 12  GVLFGSWANKFLNQDTFSLYFGIFLIFVSILLMLRDKLKPLSLSNTSVIKRSFTDNDGNA 71

Query: 161 I-----------WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAF 208
           +              + GF+SG  G+GGG      +ML +    + A ATS  +  L A 
Sbjct: 72  VHYQFPPFLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATSMFIVFLSAI 131

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            +    I            SLG V+    LI++P + +   +   ++  +    +     
Sbjct: 132 VSSATHI------------SLGNVSWIYALILIPGAWIGGKIGAYINTKLSGNAVINLLR 179

Query: 269 MIMFTTSFV 277
           + +      
Sbjct: 180 ITLIILGTR 188


>gi|223038679|ref|ZP_03608972.1| conserved hypothetical protein [Campylobacter rectus RM3267]
 gi|222880081|gb|EEF15169.1| conserved hypothetical protein [Campylobacter rectus RM3267]
          Length = 253

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 76/200 (38%), Gaps = 13/200 (6%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +  A+G S+  +  +S+     + ++  +++       F      + +  ++S+    FL
Sbjct: 45  IKYAIGISIMQMIFSSIFGSFVNFKNKMLDVAPALVLGFGGFCGALSSGFIVSYFSSKFL 104

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
                +  ++  I + K       +      + +I G+  G ++ ++G+GG +F   +++
Sbjct: 105 LGTLILVQIINLIKLFKTPTEPAGKANESKILLFIVGLAVGAVAISVGIGGSVFVMPILI 164

Query: 187 -FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
            F    I KA +T        +    L     G     L  + +G       +++   S+
Sbjct: 165 SFLNYDIKKAVSTGLFFVIFSSSAGFLSLAAHG-----LVHYDIG-------VLLGLGSL 212

Query: 246 LITPLATKLSYMIGKKYLTI 265
                  K S+ IGKK    
Sbjct: 213 AGVYAGVKTSHKIGKKAQKR 232


>gi|167627523|ref|YP_001678023.1| hypothetical protein Fphi_1298 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597524|gb|ABZ87522.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 249

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 101/263 (38%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +I+  F+ G   GL G GG ++ VP+L+           +  H A+  SL V+  T++
Sbjct: 1   MFLIIFGFICGIALGLTGGGGSILAVPLLTY-------GVGLDFHTAVPISLLVVGFTAI 53

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + + +   IN       I    I   + S +   +    L  +F+I  + +GI  L 
Sbjct: 54  FGLVVNYKQHDINYLAAAIMITTGVIFAPIGSYISQGLSDKVLMVSFSILMITIGIWSLI 113

Query: 144 RDRLYCERK--------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYK 194
           +  +    +                + G + G L+G  GVGGG      ++F     I +
Sbjct: 114 KAEVMSGAEKSICESIAPKCIIALLVSGAIVGTLTGFFGVGGGFLIVPALVFITAMPIKR 173

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A  TS  V  +++    +      +    +  +  G        + +  S++   +ATKL
Sbjct: 174 AINTSLLVIFVVSISGFISH----YEEEHMSWYVAG--------MFIIGSVIAMLIATKL 221

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K L   F++++     V
Sbjct: 222 KKRLNDKILQTLFAIMLVVLGAV 244



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 7/121 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++V+  + GTL+G FGVGGG ++VP L           ++ +  A+ TSL VI   S
Sbjct: 134 IIALLVSGAIVGTLTGFFGVGGGFLIVPALVFI-------TAMPIKRAINTSLLVIFVVS 186

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +  F+ H     ++  +   +I    I  ++ + +   ++   L   FAI  +++G ++ 
Sbjct: 187 ISGFISHYEEEHMSWYVAGMFIIGSVIAMLIATKLKKRLNDKILQTLFAIMLVVLGAVIY 246

Query: 143 K 143
            
Sbjct: 247 F 247


>gi|320013079|gb|ADW07928.1| protein of unknown function DUF81 [Streptomyces flavogriseus ATCC
           33331]
          Length = 247

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 94/260 (36%), Gaps = 20/260 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L ++A  + G   G  G GG ++ VP L                 A   SL ++ 
Sbjct: 1   MSVLILALIAGAVIGLALGALGGGGSVLAVPALIYLLGFSPAS-------ATTASLIIVT 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  +   H R G +  K+   +     +   +      ++  + L  AF++   L  +
Sbjct: 54  ATSATALYAHARDGNVAWKVGTLFAAAGIVPAFLAGAAAGYLPAAVLTGAFSVVAALAAL 113

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
            ML+        +          G+  G ++G LGVGGG      ++   G  + +A  T
Sbjct: 114 RMLRPAMSEPPERV-RPVKAVGTGVGLGAVTGFLGVGGGFLAVPALVGVLGLRMKQAVGT 172

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  V  + +  AL  R  +G           G +    +      +IL      +L+  I
Sbjct: 173 SLLVITVNSLAALTARTGTG-----------GDLRWEVIAPFTGAAILGAWDGKRLASKI 221

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
             + L   F+ ++   + + 
Sbjct: 222 TGQALQRVFAFVLLAVAALM 241



 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 1/82 (1%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHR-RHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
            + M  A+GTSL VI   S+ +        G +  +++  +     +       + S + 
Sbjct: 163 GLRMKQAVGTSLLVITVNSLAALTARTGTGGDLRWEVIAPFTGAAILGAWDGKRLASKIT 222

Query: 123 KSFLNKAFAIFCLLMGILMLKR 144
              L + FA   L +  LML  
Sbjct: 223 GQALQRVFAFVLLAVAALMLID 244


>gi|187779301|ref|ZP_02995774.1| hypothetical protein CLOSPO_02897 [Clostridium sporogenes ATCC
           15579]
 gi|187772926|gb|EDU36728.1| hypothetical protein CLOSPO_02897 [Clostridium sporogenes ATCC
           15579]
          Length = 257

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 11/166 (6%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           +I   +A+ TSL  I PT+ +    H + G I ++     I    +  +V SL  S    
Sbjct: 37  NISPSIAVSTSLATIIPTTAIGTFSHWKAGNIRIRFGLIMISGGILGAIVGSLFSSVFPV 96

Query: 124 SFLNKAFAIFCLLMGILML-----------KRDRLYCERKFPDNYVKYIWGMVTGFLSGA 172
           +  NK   I  L + I ML            + ++  +     N+   ++G++ G +SG 
Sbjct: 97  NSYNKLTGIVILYLSIQMLCSLLKKQKKATTKKKMEHKSNISSNFFAVVFGLIGGIMSGL 156

Query: 173 LGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           +G+ G I     +   G S+ +   TS  V   I+    L+ +  G
Sbjct: 157 VGLSGSIPIVAGLSILGCSVLETVGTSVMVLVGISITGFLMHLGLG 202



 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 8/115 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +V   + G +SGL G+ G + +V  LS             +   +GTS+ V+   S+  F
Sbjct: 144 VVFGLIGGIMSGLVGLSGSIPIVAGLSIL--------GCSVLETVGTSVMVLVGISITGF 195

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + H   G+++ K++            +  L++   DK  L K      L+M I +
Sbjct: 196 LMHLGLGSVDWKLVGLLATGTMSGAFLAPLLLKRADKQKLEKIIQPVLLIMTISI 250


>gi|196234164|ref|ZP_03132997.1| protein of unknown function DUF81 [Chthoniobacter flavus Ellin428]
 gi|196221815|gb|EDY16352.1| protein of unknown function DUF81 [Chthoniobacter flavus Ellin428]
          Length = 287

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 92/282 (32%), Gaps = 50/282 (17%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +   +   +  +  L G+ G+  G+ +VPVL+       I   + +  A+G SL  + 
Sbjct: 3   LHFEIWLFAVALGTSALGGMLGMASGIFIVPVLT-------IFGHVDIRAAVGVSLISVI 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  S     R    N+++         +  +   L+ + V  + L   FA    +   
Sbjct: 56  ACSCGSAAPFLRGRLTNVRLAVVLEATTTLGALSGVLLFNIVPVTILYLLFAAVLFVSAQ 115

Query: 140 LMLKRDRLYCER------------------------------KFPDNYVKYIWGMVTGFL 169
            ML R                                     +     +  ++    G L
Sbjct: 116 QMLSRRGDPVTDVGEERAPSWADALQLDAAYPDQALGRDVVYRVQRLPLGMLFMYGAGLL 175

Query: 170 SGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           S  LG+G G+     M       I  ++ATS  + ++ A  +       G     + P  
Sbjct: 176 SALLGIGSGVLKIPAMDTALRLPIKISSATSNFMISVTAAASAGAYFLRG----NIDPLM 231

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            G        ++   S++ + L  ++   +  + L I F  +
Sbjct: 232 AG--------VVALGSVVGSILGARILLRVSSEKLRILFIAV 265


>gi|152974129|ref|YP_001373646.1| hypothetical protein Bcer98_0288 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152022881|gb|ABS20651.1| protein of unknown function DUF81 [Bacillus cytotoxicus NVH 391-98]
          Length = 256

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 76/206 (36%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +  +  I L++   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSLQVIVLLVAFGFLASFIDSVVG-GGGLISLPALMFV--------GLSPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R   ++  I+   I +  +  +  +L++  +    L     +  +
Sbjct: 53  LASTMGAFTSTIYFIRSKKVDFCIVGKLIPLTIMGAIAGALVVKCIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYC----ERKFPDNYVKYIWGMV-TGFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +         ++      + + + ++  GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIVKKDWGSVSTYKKMTKGKALMFYFAILMIGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +    ++
Sbjct: 173 DFIRAAASGKVLNFVSNIVSFFTFLF 198


>gi|240140862|ref|YP_002965342.1| hypothetical protein MexAM1_META1p4434 [Methylobacterium extorquens
           AM1]
 gi|240010839|gb|ACS42065.1| conserved hypothetical protein; putative membrane protein
           [Methylobacterium extorquens AM1]
          Length = 300

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 72/201 (35%), Gaps = 15/201 (7%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S + H R G ++  + +  +    I  V  + +++ VD   +    +++ L MG
Sbjct: 106 IFTTAFSGLSHWRLGNVDGPLFRRLLIPGVIGAVAGATLLTSVDGETIKPFVSVYLLGMG 165

Query: 139 ILMLKR--DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           + +L +        R  P   V    G   GF+    G G G      ++  G     + 
Sbjct: 166 LYVLSKAFRTPKANRAPPRAVVPLALGG--GFVDAVGGGGWGPVVTATLVGGGQDPRTSI 223

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            +       +A  + L     G           G  +   +  ++   +   P+A  L  
Sbjct: 224 GSVNAAEFFVAVASGLSFTLLG-----------GLTHWTTIAGLVVGGLFAAPIAALLVR 272

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
           +I  + L +   +++ + S V
Sbjct: 273 VIPARVLMVVVGLLIASLSLV 293


>gi|24374375|ref|NP_718418.1| hypothetical protein SO_2846 [Shewanella oneidensis MR-1]
 gi|24348938|gb|AAN55862.1|AE015723_1 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 256

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 81/209 (38%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  +  +    L+   + ++G +  + G GGGL+ +P L  A         +   VA+GT
Sbjct: 1   MEFELTLQVAALLFGVAMVAGFIDSIAG-GGGLLTIPALMWA--------GLPPAVALGT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  + +   R G +++K +K  +F   I   + ++++  VD   L       
Sbjct: 52  NKLQACGGSFFASLYFVRKGLVDLKTVKLALFCAFIGAALGTVLVQLVDTKILELVLPFL 111

Query: 134 CLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYG 189
            L +G   L   ++  E +          +   +  G   G  G G G F  L  +   G
Sbjct: 112 ILAIGCYFLFSKKVSEEDRHQVLTPTVFAFTAALGVGLYDGFFGPGTGSFFALAFVTLAG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             + KATA +  ++      +L+     G
Sbjct: 172 FGLAKATAHAKVLNFSTNIASLIFFALGG 200


>gi|290475973|ref|YP_003468868.1| hypothetical protein XBJ1_2980 [Xenorhabdus bovienii SS-2004]
 gi|289175301|emb|CBJ82104.1| putative membrane protein [Xenorhabdus bovienii SS-2004]
          Length = 266

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 95/261 (36%), Gaps = 25/261 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +    + + + ++G +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 9   EIYGFLFLVAIVAGFIDSIAG-GGGLLTIPALLSV--------GVSPVQALATNKLQAVG 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R G ++ +  +  I +  +  ++ +L++  V   FL     +  +++G+ 
Sbjct: 60  GSFSASLYFIRRGAVDWRSQRFAIAMTLLGAMLGALLVQFVSPDFLRYLLPVLVIIIGLY 119

Query: 141 MLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            L    +  E   R+        + G   GF  G  G G G       ++ YG ++ KAT
Sbjct: 120 FLLVPNIGAEDRPRRLEPLAFGCLAGGGIGFYDGVFGPGTGSFLALSYVMLYGYNLAKAT 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++      +L   I  G             V     L++L    +   L   L  
Sbjct: 180 AHAKVLNFASNIGSLGFFILGGQ------------VLWLLGLVMLIGQAIGARLGAGLVL 227

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G+K +      I F  S  
Sbjct: 228 SRGQKMIRPMLVTISFLMSIK 248


>gi|85373420|ref|YP_457482.1| hypothetical protein ELI_02965 [Erythrobacter litoralis HTCC2594]
 gi|84786503|gb|ABC62685.1| hypothetical protein ELI_02965 [Erythrobacter litoralis HTCC2594]
          Length = 258

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 87/252 (34%), Gaps = 18/252 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+  F +  + G  G+  G++     +     +G+  +     A  +   V   T+  S
Sbjct: 15  FILVGFAAQIIDGALGMAFGVIT---QTMLVSALGVPPAT----ASASVHLVEVFTTGTS 67

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H     IN  +    +    I  V+ + ++S+VD S       ++   +G+ +  + 
Sbjct: 68  GASHLWRKNINWPLFWRLVPAGVIAGVLGAYVLSNVDASAAKPVVMLYLAAIGVFLFYKA 127

Query: 146 RLYCE-RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
             +    +F D         + GFL  A G G G      +L  G        T      
Sbjct: 128 IFFGRWPRFQDPRFTRPLAFIGGFLDSAGGGGWGPVVTSNLLVQGGDPRTTIGTVNSAEF 187

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           L+     +  + +  G++             AV+ ++   +   P+   L+  I  + L 
Sbjct: 188 LLTLAVSITFLAT-LGVSAFSH---------AVIGLIIGGVAAAPIGAILTSRINARLLL 237

Query: 265 IGFSMIMFTTSF 276
              + ++  TS 
Sbjct: 238 FMVATVLTATSL 249


>gi|307150572|ref|YP_003885956.1| hypothetical protein Cyan7822_0645 [Cyanothece sp. PCC 7822]
 gi|306980800|gb|ADN12681.1| protein of unknown function DUF81 [Cyanothece sp. PCC 7822]
          Length = 249

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 75/209 (35%), Gaps = 16/209 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +  + +AS L   +S L G G  L+++P++        I   I            I   
Sbjct: 2   ILIWLCLASILGWFVSTLAGGGSSLILIPLVGMMLGTAAIPPVI-----------TIGCI 50

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                        IN ++++  +    I +++    ++ +   +L    AIF +  GI  
Sbjct: 51  FGNGERSLAYRDRINWQVIRWELPGALIGSILGVFTLTTLKLEWLTILIAIFLIFSGINY 110

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           + +      +     +  +  G V  F+SG LG G G       + YG    +  AT A 
Sbjct: 111 IFKKETASFKV--KAWYFFPAGFVFAFISGILG-GTGPLLAPFYINYGLKKEELLATQAM 167

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLG 230
              +I    ++     G     LP +S G
Sbjct: 168 TRTVIHIVKVIAYGVFGL--LELPYFSYG 194


>gi|16081688|ref|NP_394060.1| hypothetical protein Ta0586 [Thermoplasma acidophilum DSM 1728]
 gi|10639754|emb|CAC11726.1| conserved hypothetical membrane protein [Thermoplasma acidophilum]
          Length = 269

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 93/276 (33%), Gaps = 38/276 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              I++  + G   GL G GG ++ +P+L     +         H+ +GT+   +   ++
Sbjct: 4   IFSIISGIIVGFSLGLIGGGGSILAIPLLIYFVGIKNP------HLVIGTTALAVGINAL 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++   H R   ++++    +     +  ++ + +        L   F+   +++G  M  
Sbjct: 58  INVYSHLRKKNVSLRTGAIFTVFGILGVLLGTTLGLITPGGKLLFLFSFLMIVIGAYMFI 117

Query: 144 RDRLYCER-------------------KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
                C+                             ++G++ GF SG  G+GGG      
Sbjct: 118 TKCKTCKNYDAIPKKNNNDDPPDPPKKGLWQKIKLEVFGVLAGFASGYFGIGGGFLIVPA 177

Query: 185 MLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +L+    ++  A  TS            L    +G             V +   L+ +  
Sbjct: 178 LLYSADITMNLAVGTSLMSVGTFGLVTALRYGIAGK------------VLVTIALLYVLG 225

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            I       KLS  + +  L   FS+I+       A
Sbjct: 226 GIFGGYAGAKLSSSMKRSTLRRFFSLIIIVVGIYMA 261


>gi|163794596|ref|ZP_02188567.1| Predicted permease [alpha proteobacterium BAL199]
 gi|159180320|gb|EDP64843.1| Predicted permease [alpha proteobacterium BAL199]
          Length = 307

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 56/306 (18%), Positives = 110/306 (35%), Gaps = 55/306 (17%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + V+L    +   + LI+    + G LSGLFGVGGG +M P+L      MG+  +    V
Sbjct: 1   MHVYLPIAEISVNVFLILGMGGMIGVLSGLFGVGGGFLMTPLLIF----MGVPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           ++ TS   I  +SV   + H R G ++ K+    +      +     + + +        
Sbjct: 53  SVATSANQIVASSVSGVIAHWRRGNVDFKMGLVLLVGGVFGSSAGVALFTLLRTFGQIDL 112

Query: 125 FLNKAFAIFCLLMGILML------------------------------KRDRLYCERKFP 154
            +N ++ IF   +G+LML                               + R    + + 
Sbjct: 113 VINLSYVIFLGTIGLLMLNESVRAIVRSRRPTVRRSKLHQHTWLHGLPLKMRFRRSKLYI 172

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLV 213
              +    G   G L+  +GVGGG      M++  G        TS      +      +
Sbjct: 173 SALLPLGIGFCVGLLTALMGVGGGFVMVPAMIYLLGMPTGVVVGTSLFQIIFVTANVTFL 232

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
           +  +              V++   + +L  +++     T+L   +  ++L    ++++  
Sbjct: 233 QAINTQT-----------VDVVLAVTLLVGAVIGAQFGTRLGVKLKGEHLRSLLALMVLG 281

Query: 274 TSFVFA 279
                A
Sbjct: 282 VCAKIA 287


>gi|13471271|ref|NP_102840.1| hypothetical protein mlr1193 [Mesorhizobium loti MAFF303099]
 gi|14022015|dbj|BAB48626.1| mlr1193 [Mesorhizobium loti MAFF303099]
          Length = 261

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 89/266 (33%), Gaps = 25/266 (9%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            D     I ++  A F +G +  + G GGGL+ +P L     L G         A+GT+ 
Sbjct: 2   IDLTAQTIVMLAFAGFAAGFVDSIAG-GGGLITIPALL----LAGFSPVE----ALGTNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 S  + + +   G ++++       +     VV +L+ + V    L     +  +
Sbjct: 53  LQGMFGSGSATIHYASKGHVDLRRQLPSALLAAAGGVVGALLATIVPGDLLRALLPLVLI 112

Query: 136 LMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGAS 191
            + +    +  +       +              GF  G  G G G F     +   G  
Sbjct: 113 AIALYFALKPNMNDIDRAERLSPFLFGLTLVPAIGFYDGLFGPGAGSFYMLAFVALAGYG 172

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           + KATA +  ++        +V              ++G ++    L++     L   + 
Sbjct: 173 VLKATAHTKLLNFASNIGGFIVFA------------AVGVISWKIGLMMGVAQFLGARVG 220

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
             L+  IG + +     ++    +  
Sbjct: 221 ASLAMRIGARLIKPLLVIVCLALAVK 246


>gi|269216459|ref|ZP_06160313.1| hypothetical membrane protein, conserved, DUF81 family [Slackia
           exigua ATCC 700122]
 gi|269129988|gb|EEZ61070.1| hypothetical membrane protein, conserved, DUF81 family [Slackia
           exigua ATCC 700122]
          Length = 297

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 59/294 (20%), Positives = 95/294 (32%), Gaps = 69/294 (23%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +     G LSG+ G+GGG VMVP+   AF L  +        A  TSL  I PTS+   
Sbjct: 8   AIVGVAIGILSGMLGIGGGTVMVPLFRLAFGLDPLA-------ATATSLFSIIPTSLAGL 60

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR-- 144
            +H R+GT   +I           + +  L  +H     +    ++      I ML+R  
Sbjct: 61  SKHLRNGTCIPRIGLICGCAGACASPLGVLAATHSPNWAVMGGTSLVIGYSSITMLRRGI 120

Query: 145 ------------DRLYCERKFPDNYVKYIWGMVTGF----------------------LS 170
                                 D       G   G                       ++
Sbjct: 121 AAVRAERAAAAVSPSKAAGAGADATASKAVGACAGGVKDPEGACSSIEAAHVAMTTRTVA 180

Query: 171 GALGVG--------------GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
             + +G              G I   L +   G S+ +A+ TS     ++A P ++ +  
Sbjct: 181 AMIAIGLIAGFMGGYVGVGGGFIMVPLFISVLGISMREASGTSLVAVCILAVPGVIEQAL 240

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
                       LG V++   L I   S+  + L   L   I +  L + F+  
Sbjct: 241 ------------LGNVHVSVGLAIAVGSMPGSILGASLVKRIPESALRLLFASF 282



 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 1/67 (1%)

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPAL 211
                   I G+  G LSG LG+GGG     L  L +G     ATATS       +   L
Sbjct: 1   MLSFVAAAIVGVAIGILSGMLGIGGGTVMVPLFRLAFGLDPLAATATSLFSIIPTSLAGL 60

Query: 212 LVRIYSG 218
              + +G
Sbjct: 61  SKHLRNG 67



 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 7/111 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +I    ++G + G  GVGGG +MVP+             I M  A GTSL  +   +
Sbjct: 179 VAAMIAIGLIAGFMGGYVGVGGGFIMVPLFISVL-------GISMREASGTSLVAVCILA 231

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           V   +E    G +++ +           +++ + ++  + +S L   FA F
Sbjct: 232 VPGVIEQALLGNVHVSVGLAIAVGSMPGSILGASLVKRIPESALRLLFASF 282


>gi|28211572|ref|NP_782516.1| transporter [Clostridium tetani E88]
 gi|28204013|gb|AAO36453.1| transporter [Clostridium tetani E88]
          Length = 258

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 97/271 (35%), Gaps = 27/271 (9%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           L+   ++  +  +  A FLS  +  + G GGGL+ +P         G       H  +GT
Sbjct: 2   LANAPMIYKVLFLCTAGFLSAFVDAIAG-GGGLISLPAYFMV----GFPP----HYTLGT 52

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S++S  +  + G ++  I+K  +    +        +  +D S L     + 
Sbjct: 53  NKFSATCGSMVSTFKFAKSGKVDKDIMKRLLPFTLLGASAGVFTVLLIDSSILKPIVLVL 112

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT-----GFLSGALGVGGGIFTNLLML-F 187
            L +G+       +  E  F     + I          GF  G  G G G F    ++  
Sbjct: 113 LLGVGVYSFFSKNVGMEDNFDGINKRNIILGCILAFSMGFYDGFFGPGVGSFLIFGLIKI 172

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           YG    +A+  +  ++      +L++   +G        + LG       + +    IL 
Sbjct: 173 YGFDFVRASGNAKAMNLTSNATSLILFAING-----KIRYLLG-------IPMTLFMILG 220

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             + TKL+   G K++   F  +    +   
Sbjct: 221 AHVGTKLALKEGAKFIKPIFVTMSLAVACKM 251


>gi|229590192|ref|YP_002872311.1| hypothetical protein PFLU2728 [Pseudomonas fluorescens SBW25]
 gi|229362058|emb|CAY48959.1| putative membrane protein [Pseudomonas fluorescens SBW25]
          Length = 261

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 97/273 (35%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +VA  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   FVVAGLIVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
            + H ++  I+  I            ++T   ++ +          + +A  +  LL  +
Sbjct: 60  VLVHGKNKNIDWTITGWLTLGSVPAVLLTLWFLASLHTDPSAMNAVIKQALGVVLLLTAL 119

Query: 140 LMLKRDRLYC-----------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L +  L                   N +  + G + G +     +G G      L +L
Sbjct: 120 AILFKKSLLAFAQRHAGDDYHMSPRNLNVLTVVTGAILGTMVALTSIGAGALGTVALFIL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +   +  +   T    +  +              + GL   S+G ++   +  +L  S+ 
Sbjct: 180 YPFLATRRLVGTEIAHAVPLTL------------VAGLGHASMGNMDWHLLGFLLMGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              + + ++  +    L    ++++    +  A
Sbjct: 228 GIYIGSHMTGKLPDGVLRPCLAVMLMAIGYKLA 260



 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 28/58 (48%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            N    + G++ GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 4   GNVGFVVAGLIVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 61



 Score = 39.3 bits (91), Expect = 0.69,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +V   + GT+  L  +G G +    L   +  +           +GT +    P ++
Sbjct: 148 VLTVVTGAILGTMVALTSIGAGALGTVALFILYPFL------ATRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G ++  +L   +        + S M   +    L    A+  + +G  +  
Sbjct: 202 VAGLGHASMGNMDWHLLGFLLMGSLPGIYIGSHMTGKLPDGVLRPCLAVMLMAIGYKLAF 261


>gi|218438664|ref|YP_002376993.1| hypothetical protein PCC7424_1689 [Cyanothece sp. PCC 7424]
 gi|218171392|gb|ACK70125.1| protein of unknown function DUF81 [Cyanothece sp. PCC 7424]
          Length = 302

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 78/248 (31%), Gaps = 36/248 (14%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP L      MG+     + +    +L  +   S++  + H + G +  +    +  
Sbjct: 27  VLAVPTLVYV---MGVPPKEAIPI----TLLAVGTVSLLGAIPHWKLGNVRPQTAATFGG 79

Query: 106 VLPITTVVTSLMIS--HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG 163
              I     + + +   +  +     F +  L+  ILM+++       +     ++Y   
Sbjct: 80  STMIGAYTGARLATLPFITGTVQMLIFGVTMLVAAILMIRKSHKSKTSEEFKTEIEYYPQ 139

Query: 164 MVT--GFLSGAL-GVGGG------------IFTNLLMLFYGASIYKATATSAGVSALIAF 208
            V    +L     G+G G                 L+L     I +A  TS  +  L + 
Sbjct: 140 PVCRYCWLWVMTEGIGVGMLTGLVGVGGGFAIVPALVLLAKVPIKQAIGTSLVIIFLNSM 199

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
                 +       G  P     +N   ++     + +       L   I  K L  GF 
Sbjct: 200 AGFYGYL-------GRVP-----LNWNLIISFTIAASIGIITGAYLVKFIQAKQLQKGFG 247

Query: 269 MIMFTTSF 276
             +   + 
Sbjct: 248 YFLLFMAA 255



 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 7/101 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
             +VP L            + +  A+GTSL +I   S+  F  +     +N  ++  +  
Sbjct: 169 FAIVPALVLL-------AKVPIKQAIGTSLVIIFLNSMAGFYGYLGRVPLNWNLIISFTI 221

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
              I  +  + ++  +    L K F  F L M   +L ++R
Sbjct: 222 AASIGIITGAYLVKFIQAKQLQKGFGYFLLFMAAFVLWQNR 262


>gi|296127579|ref|YP_003634831.1| hypothetical protein Bmur_2563 [Brachyspira murdochii DSM 12563]
 gi|296019395|gb|ADG72632.1| protein of unknown function DUF81 [Brachyspira murdochii DSM 12563]
          Length = 255

 Score = 62.4 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 53/266 (19%), Positives = 103/266 (38%), Gaps = 29/266 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + +II+   ++G +    G GGGL+ +P     + + GI      H A+ T+     
Sbjct: 4   IENLIIIIIGCSIAGFVDAAAG-GGGLISLPA----YLIAGIPP----HTALATNKFTST 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +++S     ++G +  K++K  I +  + ++V   +I  +D   L     I  L +GI
Sbjct: 55  SGAIVSAFTFFKNGKLTTKLIKFLIPMTILGSIVGVQVIVLIDAKILQPLIMILILAVGI 114

Query: 140 LMLKRDRLYCERKFPDNYVK-------YIWGMVTGFLSGALGVG-GGIFTNLLMLFYGAS 191
             L       E  F +N +K         +  + GF     G G G       +L+Y   
Sbjct: 115 YTLFSKSFGTENLFDENNLKRKNYIVGMFFAFLLGFYDAVFGPGTGSFLIMFFVLYYKMD 174

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
              A+  +  ++      +L++    G             VN  A + ++P  ++ T   
Sbjct: 175 FLLASGNAKALNLTSNLCSLIIFAIEGK------------VNYMAGIFVIPFIMISTYFG 222

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
            K +   G K +   F  I   T+  
Sbjct: 223 AKFAIKKGIKVIKPIFVTISLLTTLK 248


>gi|171184980|ref|YP_001793899.1| hypothetical protein Tneu_0510 [Thermoproteus neutrophilus V24Sta]
 gi|170934192|gb|ACB39453.1| protein of unknown function DUF81 [Thermoproteus neutrophilus
           V24Sta]
          Length = 256

 Score = 62.4 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 78/194 (40%), Gaps = 3/194 (1%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIAPTSVMS 85
            ++    G + G+ G GG ++ +P+L     L  + D +  +H+A+G++   +   ++ +
Sbjct: 11  AISGAAVGFVLGVIGGGGSILAIPLLLYFAGLATLTDLNTAVHLAVGSTALAVGANALAN 70

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           F+ H R G ++ +    +           + +        L  A     + + I +LKR 
Sbjct: 71  FLMHWRRGNVSPRGAAVFSAAGVPAAWAGAWLGKATRGEVLLAALGAAMVALSIWVLKRR 130

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
                 +  +       G   GFLSG LG+GGG      +++ G  + +A  TS    A 
Sbjct: 131 --AAGGRQLNLAKAGAGGAAVGFLSGFLGIGGGFLVAPALMWAGLDVKRAVGTSLAAVAA 188

Query: 206 IAFPALLVRIYSGW 219
                      SG+
Sbjct: 189 FGLTTAAEYATSGY 202


>gi|157736529|ref|YP_001489212.1| membrane protein, permease [Arcobacter butzleri RM4018]
 gi|157698383|gb|ABV66543.1| conserved hypothetical membrane protein, predicted permease
           [Arcobacter butzleri RM4018]
          Length = 249

 Score = 62.4 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 87/242 (35%), Gaps = 25/242 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  V+   L+   +F++G +  + G GGGL+ +P L            I    A+ T+  
Sbjct: 2   EFTVEIFLLLFFVAFIAGLIDTIAG-GGGLLTIPTLLYV--------GISPAAALATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                S  + M   R   +N+K +K  +    +  ++    +  +D S L +   I  ++
Sbjct: 53  QATFGSFTAAMYFIRKKMVNIKEIKLMLIFTFLGAILGVFTLLQIDASILKQVIPILLII 112

Query: 137 MGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
           +G   L    +     E++       +      GF  G  G   G  F    +   G ++
Sbjct: 113 IGFYFLFSPSVGAIDKEKRISIIVFSFTLAFGVGFYDGFFGPATGSFFAIGFIALLGFNL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            KATA +  ++ +    +L   ++ G             +     L +    I    +  
Sbjct: 173 TKATAHAKVLNFVSNISSLCFFMFFGK------------IYWSIGLCMGVGQICGALIGA 220

Query: 253 KL 254
           +L
Sbjct: 221 RL 222


>gi|145589661|ref|YP_001156258.1| hypothetical protein Pnuc_1480 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048067|gb|ABP34694.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 264

 Score = 62.4 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 90/251 (35%), Gaps = 34/251 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I++  L G L G+ GVGGG +M P+L+  F        +    A+GT L   A T    
Sbjct: 11  FIISGALVGLLVGMTGVGGGSLMTPLLTIIF-------GVAPTTAVGTDLAFAAITKGFG 63

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + HR HG +   I++        T V++ L++  V          ++ +  +  LL   
Sbjct: 64  TVAHRLHGNVRWDIVRLLCIGSLTTAVLSILVLKFVGPVSKSFNHLISLSIGVSVLLTAF 123

Query: 140 LMLKRDRLYCERKFPDNYVKYI---------WGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            +L R ++    +     +             G V G L     +G G     L+L    
Sbjct: 124 SLLFRGKILHWVQQNPTLLPSGSRLKVATITVGAVIGVLVTISSIGAGAIGATLILVLYP 183

Query: 191 SIYKATATSAGVSALIAFPAL-LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
            +  A                 +        L G+  W LG V+   +  +L  S+    
Sbjct: 184 HLKPAQ-----------VAGTDIAYAVPLTALAGIGHWWLGNVHFDLLFGLLLGSVPAIW 232

Query: 250 LATKLSYMIGK 260
           L  KLS  + +
Sbjct: 233 LGAKLSSTLSE 243


>gi|20090192|ref|NP_616267.1| hypothetical protein MA1331 [Methanosarcina acetivorans C2A]
 gi|19915181|gb|AAM04747.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 243

 Score = 62.4 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 86/248 (34%), Gaps = 25/248 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I + + L+  +  L G G   +MVP+L   F L              T L V      
Sbjct: 8   IFIALLTLLASVIGTLAGFGISTIMVPILLMVFPLSQ------------TLLLVGIIHWF 55

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               +       I  K+   +     +T+ + S +   + +  L++A  +F L   + + 
Sbjct: 56  NDIWKILLFRKGIRWKLFLAFGLPGIVTSFIGSSLSLRISQEVLSRALGLFLLAYVLFIT 115

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
                   R+     V    G +TGF +G  G+GG     + +  +        AT+  +
Sbjct: 116 FNQTFKLSRRLS---VAMSGGAITGFFAGIFGIGG-EINAVALNAFNLEKAVYIATAGAI 171

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
           S +I    +   I  G  L+         V +   LI +P S++   +  +    I +  
Sbjct: 172 SFMIDSTRIATYIKGGAWLDP--------VILSGFLIFIPASLIGAMIGKRWVEKIPQGK 223

Query: 263 LTIGFSMI 270
                ++ 
Sbjct: 224 FRNFVAVF 231


>gi|51245652|ref|YP_065536.1| hypothetical protein DP1800 [Desulfotalea psychrophila LSv54]
 gi|50876689|emb|CAG36529.1| conserved hypothetical membrane protein [Desulfotalea psychrophila
           LSv54]
          Length = 206

 Score = 62.4 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 72/194 (37%), Gaps = 13/194 (6%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
             D        + +   ++G +  + G GGGL+ +P L            +   +A+GT+
Sbjct: 20  GIDLSFQIFIFLFIVGAVAGLVDSIAG-GGGLIALPALLFV--------GLPPQLALGTN 70

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
                  +  +     R G ++++     I    +   + + ++  +   F      +  
Sbjct: 71  KLQGCFGTFSASYNFVRTGHVSLRGASSGIIFTLLGAGLGAWLVQQLSAGFTQYLIPVML 130

Query: 135 LLMGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL-MLFYGA 190
            ++ + ++   RL  E    K        ++GM  GF  G  G G G F  +  M   G 
Sbjct: 131 CIVFLYIMLSPRLGFEERGAKMSIFAFSLVFGMSLGFYDGFFGPGTGSFWTMACMTMMGM 190

Query: 191 SIYKATATSAGVSA 204
           ++ +A+  +  ++ 
Sbjct: 191 NMTRASGYTKIMNF 204


>gi|171915222|ref|ZP_02930692.1| hypothetical protein VspiD_28645 [Verrucomicrobium spinosum DSM
           4136]
          Length = 252

 Score = 62.4 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 90/248 (36%), Gaps = 25/248 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ +A F  G +  + G GGGL+ VP L            +   VA+GT+    +  ++
Sbjct: 7   LLLFLAGFTGGFIDSIAG-GGGLITVPALLTV--------GLPPQVALGTNKLQSSFGTL 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + + R G +  + L   +      ++  +  +S +D S L +        +    + 
Sbjct: 58  IAVVRYARAGLLGTRWLWLAVAAALCASMAGAWAVSALDTSSLKQLIPWLLAAVAAYTML 117

Query: 144 RDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATS 199
             R        + P      + G   GF  G  G G G F T  ++   G  +  AT  +
Sbjct: 118 NRRFGLTAGRERVPPVVFALVAGTALGFYDGFFGPGAGSFWTVAVVTLLGLDLRTATGYT 177

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
              +      AL + +                V+ GA   ++   +L   L + L    G
Sbjct: 178 KTANLASNVGALGIFLAHD------------AVHFGAGGAMIAGQLLGARLGSGLVVKKG 225

Query: 260 KKYLTIGF 267
            +++   F
Sbjct: 226 AQFIRPVF 233


>gi|91786137|ref|YP_547089.1| hypothetical protein Bpro_0226 [Polaromonas sp. JS666]
 gi|91695362|gb|ABE42191.1| protein of unknown function DUF81 [Polaromonas sp. JS666]
          Length = 252

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 94/263 (35%), Gaps = 25/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++  AS L+G +  + G GGGL++VP L   F               G + G     +
Sbjct: 3   LLIVTFASLLAGFVDAIVG-GGGLILVPALFAIFPTAHPATL------FGVNKGASVWGT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++  +  R   +    L          ++  + +++ +   FL KA  +  L + I  L
Sbjct: 56  AVATAQFARRVDMRWSALLPAAGAGFAASLAGAWLVTVISAGFLRKALPLVLLGVLIYTL 115

Query: 143 KRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKAT 196
            R  L            +       G+V GF  G  G G G F   L + + G     A 
Sbjct: 116 ARKDLGRHHTPRFAGRAETAAACCIGLVLGFYDGFFGPGTGSFLVFLFVRWLGYDFLNAA 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A++  ++      AL +  +             G +     L +   ++  + L T+L+ 
Sbjct: 176 ASAKLLNIATNLAALTLFAWK------------GHIWWHIALTMAVANVAGSLLGTRLAL 223

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F +++       A
Sbjct: 224 RRGADFVRSVFIVVVSALILKTA 246


>gi|228989474|ref|ZP_04149459.1| integral membrane protein [Bacillus pseudomycoides DSM 12442]
 gi|228770199|gb|EEM18778.1| integral membrane protein [Bacillus pseudomycoides DSM 12442]
          Length = 256

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 81/206 (39%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +  +  I L++   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSLQIIVLLVAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLSPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G +N +I+   I +  +  +  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAIYFIRSGKVNFRIVGKLIPLTIVGAIAGALVVKFIPPDILRPLVLVMLV 112

Query: 136 LMGILMLKRDRLYC----ERKFPDNYVKYIWGMVT-GFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +         ++      + + + +++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIVKKDWGSVSTYKKMTKGKALMFFFVILSLGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|313903548|ref|ZP_07836938.1| protein of unknown function DUF81 [Thermaerobacter subterraneus DSM
           13965]
 gi|313466101|gb|EFR61625.1| protein of unknown function DUF81 [Thermaerobacter subterraneus DSM
           13965]
          Length = 257

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 73/225 (32%), Gaps = 19/225 (8%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++MVP+L     L G        VA  T +  +   ++   + H R+  ++  ++     
Sbjct: 25  ILMVPLLLFVPPLFGFPALDMKQVAAIT-IVQVFFAALSGMVVHWRNRFVHKDLVLTMGG 83

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR-----LYCERKFPDNYVKY 160
              +  +   L+   V+   L   FA      G+LM    R        +    +  +  
Sbjct: 84  ASALAALAGGLLSDLVNPRALLLLFAGVATAAGVLMFLPRREEDPDATADHVRFNRPLAV 143

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              +  G + G +G  G      LM++           ++  +    A   ++ ++ +G 
Sbjct: 144 AIALAVGLVGGLVGAPGAFIYVPLMMYVLKIPTRVTLGSTLAIVLFTAAFGMVGKVATGQ 203

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
                       V+    L ++  S+        LS  +    L 
Sbjct: 204 ------------VDWPLALALVLGSVPGAQAGGYLSKRVRAGALR 236



 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 41/120 (34%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L +  +   G + GL G  G  + VP++    +       I   V +G++L ++  T+  
Sbjct: 141 LAVAIALAVGLVGGLVGAPGAFIYVPLMMYVLK-------IPTRVTLGSTLAIVLFTAAF 193

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +     G ++  +    +            +   V    L    A+      + M ++
Sbjct: 194 GMVGKVATGQVDWPLALALVLGSVPGAQAGGYLSKRVRAGALRWMVAVVVWGSVVQMWRQ 253


>gi|118473175|ref|YP_888034.1| YtnM protein [Mycobacterium smegmatis str. MC2 155]
 gi|118174462|gb|ABK75358.1| YtnM protein [Mycobacterium smegmatis str. MC2 155]
          Length = 318

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 87/260 (33%), Gaps = 25/260 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA-MGTSLGVIAPT 81
           + +  +    +  + G  G+  G V    L     +     S  +H+A +GT+L      
Sbjct: 4   LLIFALVGLGAQLVDGALGMAFG-VTASTLLVLSGVAAAQASAAVHLAEVGTTLA----- 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              S + H R   I+  I+        I     + ++S +         A   L++G+ +
Sbjct: 58  ---SGLSHWRFRNIDWGIVLKLGVPGAIGAFAGATVLSSLSTEDAAPLMAAILLVIGMYV 114

Query: 142 LKRDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYK 194
           L R  L     F               G+  GF+  + G G G  T   +L  G  +   
Sbjct: 115 LLRFSLRTPPVFRSGATPHTAKFLTPLGLFGGFIDASGGGGWGPVTTSTLLSRGKTAPRT 174

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
              + +    L+A  A L  +  G     L        NI  VL +    ++  PLA  L
Sbjct: 175 VIGSVSASEFLVAVSASLGFLV-GLRAEFLD-------NIPIVLGLAAGGVVAAPLAAWL 226

Query: 255 SYMIGKKYLTIGFSMIMFTT 274
              I    L      ++  T
Sbjct: 227 VSRISPALLGTAVGGVIVLT 246


>gi|118497437|ref|YP_898487.1| hypothetical protein FTN_0845 [Francisella tularensis subsp.
           novicida U112]
 gi|187931701|ref|YP_001891685.1| hypothetical protein FTM_0983 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|195536128|ref|ZP_03079135.1| domain protein of unknown function, putative [Francisella
           tularensis subsp. novicida FTE]
 gi|224457147|ref|ZP_03665620.1| hypothetical protein FtultM_05405 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|118423343|gb|ABK89733.1| conserved hypothetical membrane protein [Francisella novicida U112]
 gi|187712610|gb|ACD30907.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|194372605|gb|EDX27316.1| domain protein of unknown function, putative [Francisella
           tularensis subsp. novicida FTE]
 gi|282159255|gb|ADA78646.1| hypothetical protein NE061598_05530 [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 279

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 49/288 (17%), Positives = 102/288 (35%), Gaps = 48/288 (16%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  +I + + L G +  + G+GGGLV+ P+L+           + +H A+G SL  I 
Sbjct: 5   LFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVL-------GVPLHYAIGASLVAII 57

Query: 80  PTSVM-SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            TS   S +  + HG    K+         +  +  + +   +    L   F    +++ 
Sbjct: 58  CTSTATSLVSLQSHGLTKEKLGLFLALATAVGAIFGAKLAVMLRAKVLFLIFGGILIVVA 117

Query: 139 ILMLKRDRLYCERKFPD-----NYVKYIWGMVTGF----------LSGALGVGGGIF--- 180
           IL   + +   E K P      N ++    +V             + G + + G  F   
Sbjct: 118 ILSFIKKKSNAETKPPKQSFIANKLQLNDSVVIAGQKQDYNVNHPILGFIFMAGAGFIGG 177

Query: 181 ----------TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
                        +          + +TS  +  + AF A                +  G
Sbjct: 178 LLGIGAGIFKVVAMDKIMKIPFRVSASTSNFIMGVTAFAATSTY------------YFAG 225

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +++      +   ++L   + +KL   I  K L + F +++F ++   
Sbjct: 226 YIDSSITAAVALGTLLGATIGSKLMPHIPTKALRLMFFIVVFISAIQM 273



 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I   V+  TS  ++  T+  +   +   G I+  I         +   + S ++ H+   
Sbjct: 197 IPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSITAAVALGTLLGATIGSKLMPHIPTK 256

Query: 125 FLNKAFAIFCLLMGILMLKR 144
            L   F I   +  I M+ +
Sbjct: 257 ALRLMFFIVVFISAIQMIIK 276


>gi|301156536|emb|CBW16007.1| conserved inner membrane protein [Haemophilus parainfluenzae T3T1]
          Length = 255

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 50/241 (20%), Positives = 98/241 (40%), Gaps = 24/241 (9%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +P L     + G+  +    +A+GT+       ++ + +   R   +N+     
Sbjct: 27  GGGLITIPALL----MTGMPPA----MALGTNKLQAFGGALSASIYFLRKRAVNLSEFSF 78

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC---ERKFPDNYVK 159
            + V+ I +V+ +L+I  +D S + K      L +G+  L   +L     +++       
Sbjct: 79  ILLVIFIGSVIGTLLIQSLDASLIKKGLPFLILAIGLYFLFTPKLGESDRKQQISYAVFA 138

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             +G + GF  G  G G G   NL      G ++ KATA +  ++    F +L+      
Sbjct: 139 LCFGSLLGFYDGFFGPGTGSLMNLACVTLLGFNLTKATAHAKVMNLTSNFASLIFFFIG- 197

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                      G V     L+++  S++   L  K+    GK+ +     ++ F  +   
Sbjct: 198 -----------GHVIWTVGLVMMAGSLIGANLGAKMVMAKGKQLIRPMVVIMSFIMTIKM 246

Query: 279 A 279
           A
Sbjct: 247 A 247


>gi|256751233|ref|ZP_05492114.1| protein of unknown function DUF81 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256749958|gb|EEU62981.1| protein of unknown function DUF81 [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 253

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 98/267 (36%), Gaps = 29/267 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++YI  +    F +  +  + G GGG++ +P L       G+  +     A+GT+    +
Sbjct: 3   IEYIVALCGIGFAAAFIDSIAG-GGGIISLPGLLVL----GVPPAF----ALGTNKFAAS 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  S +   ++   +  +LK  +F   +  ++    +  +D S L     I  + + I
Sbjct: 54  CASFTSSLTFIKYRVYDGDLLKYLVFGTLLGAILGVKTVLLLDSSQLRIIIIILMMFVAI 113

Query: 140 LMLKRDRLYCERKFPDN-----YVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIY 193
             L    +  E KF         +  I  +V GF  G  G G G F   L +        
Sbjct: 114 YTLFVKNIGNENKFEGVNKKTIAIGLIISIVLGFYDGFFGPGTGSFYIFLFLTLLNYDFK 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            +      ++ +    +L++    G  L     +S+        + +    IL   L TK
Sbjct: 174 ISAGNGKILNFVSNITSLIMFALHGKIL-----YSI-------AIPMALAMILGARLGTK 221

Query: 254 LSYMIGKKYLTIGFS--MIMFTTSFVF 278
           L+   G + +        +++    +F
Sbjct: 222 LAIKNGARLIRPILISVTLLYAVKMIF 248


>gi|89256555|ref|YP_513917.1| hypothetical protein FTL_1237 [Francisella tularensis subsp.
           holarctica LVS]
 gi|156502675|ref|YP_001428740.1| hypothetical protein FTA_1309 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|89144386|emb|CAJ79676.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. holarctica LVS]
 gi|156253278|gb|ABU61784.1| putative membrane protein [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 279

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 102/281 (36%), Gaps = 34/281 (12%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  +I + + L G +  + G+GGGLV+ P+L+           + +H A+G SL  I 
Sbjct: 5   LFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVL-------GVPLHYAIGASLVAII 57

Query: 80  PTSVM-SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            TS   S +  + HG    K+         +  +  + +   +    L   F+   +++ 
Sbjct: 58  CTSTATSLVSLQSHGLTKEKLGLFLALATAVGAIFGAKLAVMLRAKVLFLIFSGILIVVA 117

Query: 139 ILMLKRDRLYCERKFPD----------NYVKYIWG---------MVTGFLSGALGVGGGI 179
           IL   + +   E K P           N    I G          + GF+   +    G 
Sbjct: 118 ILSFIKKKSNAETKPPKQSFIANKLQLNDSVVIAGQKQDYNVNHPIIGFI--FMA---GA 172

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP--WSLGFVNIGAV 237
                +L  GA I+K  A    +       A       G          +  G+++    
Sbjct: 173 GFIGGLLGIGAGIFKVVAMDKIMKIPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSIT 232

Query: 238 LIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             +   ++L   + +KL   I  K L + F +++F ++   
Sbjct: 233 AAVALGTLLGATIGSKLMPHIPTKALRLMFFIVVFISAIQM 273



 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I   V+  TS  ++  T+  +   +   G I+  I         +   + S ++ H+   
Sbjct: 197 IPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSITAAVALGTLLGATIGSKLMPHIPTK 256

Query: 125 FLNKAFAIFCLLMGILMLKR 144
            L   F I   +  I M+ +
Sbjct: 257 ALRLMFFIVVFISAIQMIIK 276


>gi|297184282|gb|ADI20400.1| predicted permeases [uncultured alpha proteobacterium EB080_L27A02]
          Length = 251

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 82/239 (34%), Gaps = 24/239 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +PV+  A         +   VA+GT+       +  + +     G +N++ L  
Sbjct: 28  GGGLLTIPVMLIA--------GVPPLVALGTNKLQGLFGTASATITFAMKGHLNIRALWP 79

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD---RLYCERKFPDNYVK 159
                   +++ +L+ S++ +  L        + + +             +   P   + 
Sbjct: 80  IALFCFFASMLGALIASYIPEKKLAIFLPYILIAIALYFALSKNTNNPNKKPILPFFILA 139

Query: 160 YIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            I   + GF  G  G G G F     +   G  I +ATA +  ++        +      
Sbjct: 140 SIILPIIGFYDGVFGPGAGSFYMLAFISIGGLGIIQATAQTKLMNFSSNIGGFIYFAI-- 197

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                     +G +N    L +    I+ + +  +L+   G K +      +   T+  
Sbjct: 198 ----------IGAINWEIGLTMALGQIIGSTIGARLAINKGAKIIKPLLVTVCILTALR 246



 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 35/104 (33%), Gaps = 12/104 (11%)

Query: 176 GGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           GGG+ T  +ML  G     A  T+          A +                 G +NI 
Sbjct: 28  GGGLLTIPVMLIAGVPPLVALGTNKLQGLFGTASATITFAMK------------GHLNIR 75

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           A+  I       + L   ++  I +K L I    I+   +  FA
Sbjct: 76  ALWPIALFCFFASMLGALIASYIPEKKLAIFLPYILIAIALYFA 119


>gi|294341936|emb|CAZ90365.1| putative permease [Thiomonas sp. 3As]
          Length = 251

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 54/263 (20%), Positives = 96/263 (36%), Gaps = 25/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+ +A+  +G +  + G GGGLV+VP L  AF               GT+ G     +
Sbjct: 3   LILLGIAALFAGFVDAIVG-GGGLVLVPALFAAFPN------AAPATLFGTNKGGAIWGT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   + R        +        +  +  + +I+ V  +   +A     L + +  L
Sbjct: 56  SASMWSYVRRVQPPWSTVAPATLAAFVGALGGAWLITQVKSTDFRQALPFILLAVLLYTL 115

Query: 143 KRDRL--YCERKFPDNYVKYIW---GMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
           KR  L  +          + +    G++ GF  G  G G G     L +  +G     A+
Sbjct: 116 KRKDLGHHHAPHLSGGAERALAVGGGLLIGFYDGFFGPGTGNFLIFLFVRGFGFDFLHAS 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A++  V+      ALLV              S G V      +I   +I  + L T+L+ 
Sbjct: 176 ASAKVVNVACNLAALLVFA------------SKGHVMWQYAALIAVCNIAGSLLGTRLAL 223

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F +++       A
Sbjct: 224 RRGTHFVRGVFLLVVAALILKTA 246


>gi|237738140|ref|ZP_04568621.1| membrane protein [Fusobacterium mortiferum ATCC 9817]
 gi|229420020|gb|EEO35067.1| membrane protein [Fusobacterium mortiferum ATCC 9817]
          Length = 276

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 102/271 (37%), Gaps = 27/271 (9%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           ++     +  +     + +A F++  +  + G GGGL+ VP     +   GI      H+
Sbjct: 1   MLEEFLSNVDIGTFIFLGIACFIAAFIDAVAG-GGGLITVPA----YLASGIPP----HI 51

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+GT+    +  +V S ++    G +N ++ K  +    +  ++    +  +D  +L   
Sbjct: 52  ALGTNKVSSSIGTVASALKFATSGKVNWELSKKIMPFSLVGALLGVKTVVLIDSKYLYPI 111

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
             +  LL+ I  L   ++  E  F            + G+  GF  G  G G G F    
Sbjct: 112 AIVLLLLVLIYTLVNKKMGEENNFQGLNKGNVNAGRVMGLTMGFYDGFFGPGTGSFLIFA 171

Query: 185 MLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           ++  +      A+  +  ++      ++ + I+            LG VN    + I  I
Sbjct: 172 LIRIFKLDFTNASGNAKILNLTSNLASMFLFIF------------LGKVNFFYSVPIGII 219

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            I    L  K +   G K++   F ++    
Sbjct: 220 MIFGATLGAKTAVTKGTKFIKPMFLIVTSIV 250


>gi|304438496|ref|ZP_07398436.1| protein of hypothetical function DUF81 [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368579|gb|EFM22264.1| protein of hypothetical function DUF81 [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 252

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 95/253 (37%), Gaps = 32/253 (12%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ ++  L G + G  G GG  V++ +L   F        + +H A+  +LG +A T++ 
Sbjct: 1   MLFLSMLLMGGIIGFVGAGGSGVIITLLVVGF-------CVPIHQALAVALGSMAFTTLS 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + H R   +             +  ++ +++ +H++   L+    +  L    L+  R
Sbjct: 54  GAVSHYREREVVPLTGAVLGAGGLLGALLGAVISNHMEAPNLSLFTGVMLLSSAFLLYLR 113

Query: 145 D--------RLYCERKFPDNYVKYIWGMVTGF----LSGALGVGGGI-FTNLLMLFYGAS 191
                     ++   +       Y++G+  GF    LSGA G+G        LM+ +G  
Sbjct: 114 IYRAVWLSAHIHVREELLTGRRLYLYGLPIGFLCGVLSGAFGIGSAAYIQIALMVVFGVP 173

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           + +A  T+  +   I+    +  +  G     L             +  L    L +   
Sbjct: 174 LLQAIGTTMMIIVPISISGGIGYLLYGQLEPWL------------FIQTLVALSLGSYAG 221

Query: 252 TKLSYMIGKKYLT 264
            KL+++     L 
Sbjct: 222 AKLTHLAPLPVLR 234



 Score = 38.9 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 45/122 (36%), Gaps = 7/122 (5%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
                +   FL G LSG FG+G    +   L   F        + +  A+GT++ +I P 
Sbjct: 136 LYLYGLPIGFLCGVLSGAFGIGSAAYIQIALMVVF-------GVPLLQAIGTTMMIIVPI 188

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+   + +  +G +   +    +  L + +   + +        L         + G +M
Sbjct: 189 SISGGIGYLLYGQLEPWLFIQTLVALSLGSYAGAKLTHLAPLPVLRFWIVALPTIGGAIM 248

Query: 142 LK 143
           + 
Sbjct: 249 IL 250


>gi|114769609|ref|ZP_01447219.1| hypothetical protein OM2255_08581 [alpha proteobacterium HTCC2255]
 gi|114549314|gb|EAU52196.1| hypothetical protein OM2255_08581 [alpha proteobacterium HTCC2255]
          Length = 251

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 82/239 (34%), Gaps = 24/239 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +PV+  A         +   VA+GT+       +  + +     G +N++ L  
Sbjct: 28  GGGLLTIPVMLIA--------GVPPLVALGTNKLQGLFGTASATITFAMKGHLNIRALWP 79

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD---RLYCERKFPDNYVK 159
                   ++  +L+ S++ +  L        + + +             +   P   + 
Sbjct: 80  IALFCFFASMFGALIASYIPEKKLAIFLPYILIAIALYFALSKNTNNPNKKPILPFFILA 139

Query: 160 YIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            I   + GF  G  G G G F     +   G  I +ATA +  ++        +      
Sbjct: 140 CIILPIIGFYDGVFGPGAGSFYMLAFISIGGLGIIQATAQTKLMNFSSNIGGFIYFAI-- 197

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                     +G +N    L +    I+ + +  +L+   G K +     ++   T+  
Sbjct: 198 ----------IGAINWEIGLTMALGQIIGSTIGARLAINKGAKIIKPLLVIVCILTALR 246



 Score = 38.1 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 34/104 (32%), Gaps = 12/104 (11%)

Query: 176 GGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           GGG+ T  +ML  G     A  T+          A +                 G +NI 
Sbjct: 28  GGGLLTIPVMLIAGVPPLVALGTNKLQGLFGTASATITFAMK------------GHLNIR 75

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           A+  I       +     ++  I +K L I    I+   +  FA
Sbjct: 76  ALWPIALFCFFASMFGALIASYIPEKKLAIFLPYILIAIALYFA 119


>gi|78047860|ref|YP_364035.1| hypothetical protein XCV2304 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|121593750|ref|YP_985646.1| hypothetical protein Ajs_1353 [Acidovorax sp. JS42]
 gi|78036290|emb|CAJ23981.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|120605830|gb|ABM41570.1| protein of unknown function DUF81 [Acidovorax sp. JS42]
          Length = 268

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 84/264 (31%), Gaps = 42/264 (15%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           GL G GGG+  VP L            + +  A   +L  +   + +  ++  R G +  
Sbjct: 18  GLTGAGGGIFAVPALVFGL-------GMDIRSAAPVALLAVGAAAALGAVQGLRRGIVRY 70

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK----- 152
           K          +T  +   +   +   +LN  F    L++   M    R           
Sbjct: 71  KAAMVLAAAGTVTAPLGVQLAHWLSPRWLNMVFVAIMLIIAYRMFLSSRSPQADSDLGDE 130

Query: 153 -----------------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYK 194
                                      G+V+G  +G LGVGGG      +  +    ++ 
Sbjct: 131 QAKACKVSKDTGRFLWNLRTATTLGSIGVVSGLATGMLGVGGGFIIVPALAHFSELRMHS 190

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             ATS     +IA  + +    +      L   +  FV + A++ +             +
Sbjct: 191 IVATSL---MVIALLSAVTVFIAWSHGLLLTAPTWAFV-LTALVGMAG--------GRAV 238

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
           +  I  K L   FS+   + + + 
Sbjct: 239 ALRIPSKMLQRVFSITCVSVAALM 262



 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             +SG  +G+ GVGGG ++VP L+           + MH  + TSL VIA  S ++    
Sbjct: 158 GVVSGLATGMLGVGGGFIIVPALAHF-------SELRMHSIVATSLMVIALLSAVTVFIA 210

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
             HG +       ++    +       +   +    L + F+I C+ +  LML R+
Sbjct: 211 WSHGLLLTAPTWAFVLTALVGMAGGRAVALRIPSKMLQRVFSITCVSVAALMLMRN 266


>gi|126652414|ref|ZP_01724587.1| hypothetical protein BB14905_14150 [Bacillus sp. B14905]
 gi|126590835|gb|EAZ84949.1| hypothetical protein BB14905_14150 [Bacillus sp. B14905]
          Length = 256

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 96/262 (36%), Gaps = 26/262 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  V  + L+I   FL+  +  + G GGGL+ +P L            +    A+ T+  
Sbjct: 4   DVDVHILILLISFGFLAAFIDSVVG-GGGLISLPALLFV--------GLNPAAAVATNKL 54

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             A  S+ S +   R G + ++ +  +  +  I ++  +  +  ++ + L     I    
Sbjct: 55  AGAMGSLTSSISFYRSGQLEIRSVLKYFPLAFIGSLCGAWTVHLINPALLKPLMLIMLAA 114

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMV-----TGFLSGALGVGGGIFTNLLMLFYGAS 191
           +GI  + +          +    +++  +      GF  G LG G G F     L  G  
Sbjct: 115 VGIYTIFKKDWGAVSTVKNLSKTHLFLFMMLLFAIGFYDGFLGPGTGSFLIFSFLLVGFD 174

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
             KA   +  ++       + +  Y            LG ++    L++    I    L 
Sbjct: 175 FLKAAGNAKFLNLASNVAGVCMFAY------------LGQIHYVYGLVMGVAQIGGAMLG 222

Query: 252 TKLSYMIGKKYLTIGFSMIMFT 273
           ++++   G  ++   F ++  T
Sbjct: 223 SRMAIQKGSGFVRTLFIIVTMT 244


>gi|297527225|ref|YP_003669249.1| protein of unknown function DUF81 [Staphylothermus hellenicus DSM
           12710]
 gi|297256141|gb|ADI32350.1| protein of unknown function DUF81 [Staphylothermus hellenicus DSM
           12710]
          Length = 265

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 91/268 (33%), Gaps = 36/268 (13%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +   +   LS + G+GGG  M+P              + ++  +GTS  VI   S+   
Sbjct: 12  FIGGLVIAVLSTMAGIGGGAFMIPYFYFI--------GLPINEVIGTSKFVIVFISLFGT 63

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           + + R   + +K     +  +   + + + ++S ++   L    +IF L   I ++    
Sbjct: 64  INYLRLRKVMIKQGIMILIGMIPASYLGAYLVSVINDWILRLIISIFILFYSIRLIYGFL 123

Query: 147 LYCERKFPDNYVKYIWG-----------MVTGFLSGALGVGGGIF-----TNLLMLFYGA 190
                +   +  +   G           ++ G LSG +    G         L +     
Sbjct: 124 RKKLERIKTSTSQQYVGNNYMVNKPFIAVLIGLLSGFVAGLTGTGGGVVNMPLFLSVMKI 183

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            ++ A A S  V    +  A +         N    + +G       L  +  +++   +
Sbjct: 184 PVHFAVALSTFVIFPSSISAAIRHAL-----NNDINYFIG-------LPFVLGAVIGANI 231

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             +++     ++L +    I+F      
Sbjct: 232 GPRIAIKTRSQHLRLIIGSILFYAGIRM 259



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 44/121 (36%), Gaps = 12/121 (9%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           +  +I G+V   LS   G+GGG F      F G  I +   TS  V   I+    +  + 
Sbjct: 9   FANFIGGLVIAVLSTMAGIGGGAFMIPYFYFIGLPINEVIGTSKFVIVFISLFGTINYL- 67

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                       L  V I   ++IL   I  + L   L  +I    L +  S+ +   S 
Sbjct: 68  -----------RLRKVMIKQGIMILIGMIPASYLGAYLVSVINDWILRLIISIFILFYSI 116

Query: 277 V 277
            
Sbjct: 117 R 117



 Score = 43.5 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 7/132 (5%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
             ++  + +V+   + ++   LSG ++GL G GGG+V +P+     +       I +H A
Sbjct: 136 QQYVGNNYMVNKPFIAVLIGLLSGFVAGLTGTGGGVVNMPLFLSVMK-------IPVHFA 188

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +  S  VI P+S+ + + H  +  IN  I   ++    I   +   +        L    
Sbjct: 189 VALSTFVIFPSSISAAIRHALNNDINYFIGLPFVLGAVIGANIGPRIAIKTRSQHLRLII 248

Query: 131 AIFCLLMGILML 142
                  GI ML
Sbjct: 249 GSILFYAGIRML 260


>gi|146299260|ref|YP_001193851.1| hypothetical protein Fjoh_1500 [Flavobacterium johnsoniae UW101]
 gi|146153678|gb|ABQ04532.1| protein of unknown function DUF81 [Flavobacterium johnsoniae UW101]
          Length = 295

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 90/251 (35%), Gaps = 21/251 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             +       +  + G  G+G G      L  A+ +  +  S  +HV+          T+
Sbjct: 54  FLVFFAIGVFAQLVDGTLGMGYGATSTSFLL-AYGVPPVMSSTAVHVSE-------MFTT 105

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS-HVDKSFLNKAFAIFCLLMGILM 141
             S + H R G IN K+++  +    + ++  + ++S  ++   +    A++ +++ + +
Sbjct: 106 GASALSHHRFGNINKKLVRHLLIPGVLGSITGAYLLSDVINGDVIKPFIAVYMIILAV-I 164

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           + R  L                +  GF+    G G G      +L  G +      +   
Sbjct: 165 IIRKALKKNIVKKKTKKLGALAVFGGFMDSVGGGGWGPIVTSTLLGRGRNPRYTIGSVNA 224

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
               I+F + +  +  G           G      ++ ++   +   PLA  L   I +K
Sbjct: 225 AEFAISFASGITFMLFG-----------GIHGWQVIIGLILGGVFSAPLAAYLVNKIKRK 273

Query: 262 YLTIGFSMIMF 272
            + +   +++ 
Sbjct: 274 PMMVAVGVLII 284


>gi|317121104|ref|YP_004101107.1| hypothetical protein Tmar_0255 [Thermaerobacter marianensis DSM
           12885]
 gi|315591084|gb|ADU50380.1| protein of unknown function DUF81 [Thermaerobacter marianensis DSM
           12885]
          Length = 257

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 74/225 (32%), Gaps = 19/225 (8%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++MVP+L     L G        VA  T +  +   ++   + H R+  ++  ++     
Sbjct: 25  ILMVPLLLFVPPLFGFPALDMKQVAAIT-IVQVFFAALSGMLVHWRNRFVHKDLVLTMGG 83

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR-----LYCERKFPDNYVKY 160
              +  +   L+   V+   L   FA    + G+LM    R        +    +  +  
Sbjct: 84  ASALAALAGGLLSDLVNARALLLLFASIATVAGVLMFLPRREDDPDATADSVRFNRPLAV 143

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              +  G + G +G  G      LM++           ++  +    A   ++ ++ +G 
Sbjct: 144 AIALAVGLVGGLVGAPGAFIYVPLMMYVLKIPTRVTLGSTLAIVLFTATFGMVGKVATGQ 203

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
                       V+    L ++  S+        LS  +    L 
Sbjct: 204 ------------VDWPLALALVLGSVPGAQAGGYLSKRVRAGALR 236



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 39/119 (32%), Gaps = 7/119 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L +  +   G + GL G  G  + VP++    +       I   V +G++L ++  T+  
Sbjct: 141 LAVAIALAVGLVGGLVGAPGAFIYVPLMMYVLK-------IPTRVTLGSTLAIVLFTATF 193

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
             +     G ++  +    +            +   V    L    A       + M +
Sbjct: 194 GMVGKVATGQVDWPLALALVLGSVPGAQAGGYLSKRVRAGALRWMVAAVVWASVLQMWR 252


>gi|78047997|ref|YP_364172.1| hypothetical protein XCV2441 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78036427|emb|CAJ24118.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 216

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 64/177 (36%), Gaps = 11/177 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP++      +G+D+    HVA+GTS   +A  ++ +   H R G +       +  
Sbjct: 32  ILAVPLMLYL---VGVDNP---HVAIGTSALAVAANALSNLFVHARRGNVRWPCASVFAL 85

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
                  + S +   VD   L   FA   +++G+LML++           +       + 
Sbjct: 86  AGVAGAYLGSSLGKAVDGQRLLALFAGLMVVIGLLMLRKRNAQENAAARISKENAPALVG 145

Query: 166 TGFLSGALGVGGGI-----FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
            G L+G      GI         LM   G  +  A   S    +       +   YS
Sbjct: 146 LGTLAGGFSGFFGIGGGFLIVPGLMTATGMPMLAAVGGSLVAVSAFGLTTAVNYAYS 202


>gi|320536758|ref|ZP_08036761.1| hypothetical protein HMPREF9554_01492 [Treponema phagedenis F0421]
 gi|320146392|gb|EFW38005.1| hypothetical protein HMPREF9554_01492 [Treponema phagedenis F0421]
          Length = 259

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 72/200 (36%), Gaps = 16/200 (8%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +    FL+G +    G GGGL+ +P              +  H A+G +    A  +  
Sbjct: 10  FLCFFVFLAGFVDSAAG-GGGLISLPAFFFV--------GVPTHHAIGCNKFSAACGTTF 60

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S      H  ++ K+          T+ + + +   +D   L   F I   ++ + +L +
Sbjct: 61  SAFRFFTHKALDWKVAGISAIFSFFTSFLGTKLALKIDPITLKTVFIIVLPIVAVFLLLK 120

Query: 145 DRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
                E K           +    G V GF  G +G G G F  +   ++    +  A+ 
Sbjct: 121 RNFGSENKSFEIPQKKAFILAGGIGSVIGFYDGLIGPGTGTFAIIAYSMWMKYDLKNASG 180

Query: 198 TSAGVSALIAFPALLVRIYS 217
            +  ++    + +++  I S
Sbjct: 181 NAKILNLASNYASVIAVILS 200



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 36/115 (31%), Gaps = 19/115 (16%)

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT---SAGVSALIAFPALLVRIYSGWG 220
            + GF+  A G GGG+ +     F G   + A      SA      +           W 
Sbjct: 16  FLAGFVDSAAG-GGGLISLPAFFFVGVPTHHAIGCNKFSAACGTTFSAFRFFTHKALDWK 74

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           + G+                   S   + L TKL+  I    L   F +++   +
Sbjct: 75  VAGIS---------------AIFSFFTSFLGTKLALKIDPITLKTVFIIVLPIVA 114


>gi|228995669|ref|ZP_04155332.1| integral membrane protein [Bacillus mycoides Rock3-17]
 gi|229003298|ref|ZP_04161128.1| integral membrane protein [Bacillus mycoides Rock1-4]
 gi|228757916|gb|EEM07131.1| integral membrane protein [Bacillus mycoides Rock1-4]
 gi|228764046|gb|EEM12930.1| integral membrane protein [Bacillus mycoides Rock3-17]
          Length = 256

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 81/206 (39%), Gaps = 14/206 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +  +  I L++   FL+  +  + G GGGL+ +P L            +    A+ T+ 
Sbjct: 2   DELSLQIIVLLVAFGFLAAFIDSVVG-GGGLISLPALMFV--------GLSPASAIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G +N +I+   I +  +  +  +L++  +    L     I  +
Sbjct: 53  LAATMGTFTSAIYFIRSGKVNFRIVGKLIPLTIVGAIAGALVVKFIPPDILRPLVLIMLV 112

Query: 136 LMGILMLKRDRLYC----ERKFPDNYVKYIWGMVT-GFLSGALGVGGGIFTNLLMLFYGA 190
            + I ++ +         ++      + + + +++ GF  G  G G G F     L  G 
Sbjct: 113 FIAIYIIVKKDWGSASTYKKMTKGKALMFFFVILSLGFYDGFFGPGTGSFLIFAFLLIGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIY 216
              +A A+   ++ +    +L+  ++
Sbjct: 173 DFIQAAASGKLLNFVSNIVSLITFLF 198


>gi|194099337|ref|YP_002002437.1| hypothetical protein NGK_1812 [Neisseria gonorrhoeae NCCP11945]
 gi|239999594|ref|ZP_04719518.1| hypothetical protein Ngon3_08948 [Neisseria gonorrhoeae 35/02]
 gi|240017217|ref|ZP_04723757.1| hypothetical protein NgonFA_08638 [Neisseria gonorrhoeae FA6140]
 gi|240113358|ref|ZP_04727848.1| hypothetical protein NgonM_07262 [Neisseria gonorrhoeae MS11]
 gi|240126259|ref|ZP_04739145.1| hypothetical protein NgonSK_08622 [Neisseria gonorrhoeae SK-92-679]
 gi|254494309|ref|ZP_05107480.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268595405|ref|ZP_06129572.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268599431|ref|ZP_06133598.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268684840|ref|ZP_06151702.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|193934627|gb|ACF30451.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
 gi|226513349|gb|EEH62694.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268548794|gb|EEZ44212.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268583562|gb|EEZ48238.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268625124|gb|EEZ57524.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|317164847|gb|ADV08388.1| hypothetical protein NGTW08_1427 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 262

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 93/261 (35%), Gaps = 26/261 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  + + + ++G +  + G GGGL+ +P L     L GI        A+ T+    A  
Sbjct: 6   IILALGLVAMIAGFIDAIAG-GGGLITLPALL----LAGIPPVS----AIATNKLQAAAA 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  + +   R G I+ K             VV +L +S V K  L     +  + + +  
Sbjct: 57  TFSATVSFARKGLIDWKKSLPIAAASFAGGVVGALSVSLVSKDILLAVVPVLLIFVALYF 116

Query: 142 LKRDRLYCERKFPDNYVKYIWGM----VTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
           +   +L   ++       +++G+    + GF  G  G G G  F    ++  G  +  A 
Sbjct: 117 VFSPKLDGSKEGKARMSFFLFGLTVAPLLGFYDGVFGPGVGSFFLIAFIVLLGCKLLNAM 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           + +   +      +L V +  G             +    V  +   + +   L  + + 
Sbjct: 177 SYTKLANVACNLGSLSVFLLHGS------------IIFPIVATMAVGAFVGANLGARFAV 224

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G K +     +I  + +  
Sbjct: 225 RFGSKLIKPLLIVISISMAVK 245


>gi|59801860|ref|YP_208572.1| hypothetical protein NGO1524 [Neisseria gonorrhoeae FA 1090]
 gi|240014768|ref|ZP_04721681.1| hypothetical protein NgonD_09025 [Neisseria gonorrhoeae DGI18]
 gi|240081146|ref|ZP_04725689.1| hypothetical protein NgonF_07518 [Neisseria gonorrhoeae FA19]
 gi|240121291|ref|ZP_04734253.1| hypothetical protein NgonPI_05900 [Neisseria gonorrhoeae PID24-1]
 gi|240128794|ref|ZP_04741455.1| hypothetical protein NgonS_09254 [Neisseria gonorrhoeae SK-93-1035]
 gi|260439889|ref|ZP_05793705.1| hypothetical protein NgonDG_02154 [Neisseria gonorrhoeae DGI2]
 gi|268597256|ref|ZP_06131423.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268687177|ref|ZP_06154039.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291043164|ref|ZP_06568887.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|293398498|ref|ZP_06642676.1| hypothetical protein NGNG_01155 [Neisseria gonorrhoeae F62]
 gi|59718755|gb|AAW90160.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|268551044|gb|EEZ46063.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268627461|gb|EEZ59861.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291012770|gb|EFE04753.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|291610969|gb|EFF40066.1| hypothetical protein NGNG_01155 [Neisseria gonorrhoeae F62]
          Length = 262

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 93/261 (35%), Gaps = 26/261 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  + + + ++G +  + G GGGL+ +P L     L GI        A+ T+    A  
Sbjct: 6   IILALGLVAMIAGFIDAIAG-GGGLITLPALL----LAGIPPVS----AIATNKLQAAAA 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  + +   R G I+ K             VV +L +S V K  L     +  + + +  
Sbjct: 57  TFSATVSFARKGLIDWKKGLPIAAASFAGGVVGALSVSLVSKDILLAVVPVLLIFVALYF 116

Query: 142 LKRDRLYCERKFPDNYVKYIWGM----VTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
           +   +L   ++       +++G+    + GF  G  G G G  F    ++  G  +  A 
Sbjct: 117 VFSPKLDGSKEGKARMSFFLFGLTVAPLLGFYDGVFGPGVGSFFLIAFIVLLGCKLLNAM 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           + +   +      +L V +  G             +    V  +   + +   L  + + 
Sbjct: 177 SYTKLANVACNLGSLSVFLLHGS------------IIFPIVATMAVGAFVGANLGARFAV 224

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G K +     +I  + +  
Sbjct: 225 RFGSKLIKPLLIVISISMAVK 245


>gi|291556352|emb|CBL33469.1| Predicted permeases [Eubacterium siraeum V10Sc8a]
          Length = 258

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 96/248 (38%), Gaps = 25/248 (10%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           +G  G+    V+ P+L      +GI+     + A+G +L      S +S   + ++  ++
Sbjct: 21  TGFAGMSAAAVITPMLV---TFLGIEP----YTAVGIALASDVLASAVSAYTYGKNKNLD 73

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN 156
           +K     +  + I TVV S + S V    +        LL+GI  + R  +  +      
Sbjct: 74  IKNGLVMMITVLIFTVVGSFVSSLVPSVAMGNFSVFMTLLLGIKFIVRPVMTTKADMSAR 133

Query: 157 YVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFP 209
             K       I G++ GF+ G +G GGG+   LL+    G  +  A  TS  +    A  
Sbjct: 134 SAKSVLIKSIICGIMVGFICGFIGAGGGMMMLLLLTSVMGYELKTAVGTSVFIMTFTALT 193

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             +     G   + LP            ++ +  +++   +A K++     + L     +
Sbjct: 194 GSVSHFAIGGLPDMLP-----------FILCIIFTLIFARIAAKIANKASPETLNRVTGI 242

Query: 270 IMFTTSFV 277
           I+     V
Sbjct: 243 ILVILGIV 250


>gi|284047396|ref|YP_003397735.1| protein of unknown function DUF81 [Acidaminococcus fermentans DSM
           20731]
 gi|283951617|gb|ADB46420.1| protein of unknown function DUF81 [Acidaminococcus fermentans DSM
           20731]
          Length = 254

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 90/253 (35%), Gaps = 27/253 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++ A F+   +    G GGGL+ +P          +   I    A+G++    +  +
Sbjct: 9   LIFLLAAGFIGSFVDAAVG-GGGLITLPAF--------MATGIPTPFALGSNKLASSIGA 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V SF    R G ++ KILK  + +  + +   + + S + +  L        + + +   
Sbjct: 60  VTSFFTFARSGKVDRKILK-MMPLSFLGSAAGACIASLLPEHLLRYIVVAALVGVALYTY 118

Query: 143 KRDRLYCERKFPDNYVKYIWGMV-----TGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            R       +  +     + G+       G   G  G G G F     L++G +   A  
Sbjct: 119 HRKNWDGVNEMTEMTRSVVLGIAAMAWCLGMYDGFFGPGTGSFLIFGFLYFGYNFVTAAG 178

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  ++       LL  +  G             V +   L +  + IL   L  K++  
Sbjct: 179 NTKALNLASNLGGLLAFLLLGR------------VYLAYALPMGLVEILGARLGAKIAIK 226

Query: 258 IGKKYLTIGFSMI 270
            G  Y+   + ++
Sbjct: 227 KGVGYIRTLYLVM 239


>gi|332532181|ref|ZP_08408062.1| hypothetical protein PH505_ad00170 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332038279|gb|EGI74724.1| hypothetical protein PH505_ad00170 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 258

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 93/251 (37%), Gaps = 28/251 (11%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G +  + G GGG++ VP L  A         +  H+ +GT+    +  S+ +   + +  
Sbjct: 22  GFIDAIAG-GGGMLTVPALLTA--------GLPPHLTLGTNKLAASFGSLTASYTYYKKN 72

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK-RDRLYCERK 152
             + K     I    I  ++ ++++ H+   FLNK   I  +L+    L          +
Sbjct: 73  LFSPKFWAASIIATAIGALIGTVIVDHLSIDFLNKLLPIIIILVAGYSLFGNLSTTEGDE 132

Query: 153 FPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALI 206
            P         +++ G+  GF  G  G G G F      + Y  ++      +  ++ + 
Sbjct: 133 LPKLNKAMKIKQWLQGLALGFFDGLAGPGTGTFWTASNGMLYKMNLLLNCGLARSMNFVS 192

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
            F +L+  +            +LG VN    + +    +L        +   G K++   
Sbjct: 193 NFISLITFV------------ALGHVNFLLGITMGFFIMLGAWFGAHSAIRFGSKFIRPV 240

Query: 267 FSMIMFTTSFV 277
           F+ ++   +  
Sbjct: 241 FNTMVILLALK 251


>gi|330827453|ref|YP_004400653.1| hypothetical protein SSAP_P129 [Staphylococcus saprophyticus subsp.
           saprophyticus MS1146]
 gi|328887851|emb|CBW54944.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
           saprophyticus MS1146]
          Length = 178

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 68/158 (43%), Gaps = 13/158 (8%)

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW 162
               + I +++ +L+ +  D +F+N  + I  LL  ILM    +   ++   +  +  I 
Sbjct: 1   MGGGMIIGSMLGALLANLFDATFVNTVYIIIALLALILMFINVKSSTDQSSFNKPLLVIV 60

Query: 163 GMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
           G+  G +SG +G GG       L++ +   +    A S  ++ + +  A ++++      
Sbjct: 61  GLFVGIISGIVGAGGSFIIIPILLVLFKLPMNTVVANSIIIAFISSIGAFIIKLIQ---- 116

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                   G++ +   L ++  SI+  PL  KL   + 
Sbjct: 117 --------GYIPLEDALFLIIGSIIFAPLGLKLGKKVP 146



 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 45/111 (40%), Gaps = 7/111 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+++     G +SG+ G GG  +++P+L   F+L        M+  +  S+ +   +S+ 
Sbjct: 56  LLVIVGLFVGIISGIVGAGGSFIIIPILLVLFKL-------PMNTVVANSIIIAFISSIG 108

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
           +F+     G I ++     I    I   +   +   V         +I  +
Sbjct: 109 AFIIKLIQGYIPLEDALFLIIGSIIFAPLGLKLGKKVPSFVQKWIISILFI 159


>gi|303326338|ref|ZP_07356781.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
 gi|302864254|gb|EFL87185.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
          Length = 251

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 86/227 (37%), Gaps = 23/227 (10%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
              L+ +   + +H A+GTSL  +A T++     H R G +  ++         +     
Sbjct: 25  MITLLTVGFGVPIHTALGTSLAAMAFTALSGSYSHFREGNVLRRLGLAMGLFGAVGAFCG 84

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK----------YIWGM 164
           + + S +D + L    A   LL  +L+  R        F   ++            + G+
Sbjct: 85  ARVSSSLDTAVLTPLTAAALLLSALLIYLRIFHPHSPLFRQRFLTPLGGRFWLLAGLTGL 144

Query: 165 VTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           V G + GA GVG   F  L L+L + A +Y+   T+  V   IA    +  + +G     
Sbjct: 145 VNGLIFGACGVGAASFIQLSLLLVFNAPLYQTVGTTMLVILPIAVLGGVGFLSAGHLEPL 204

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           L             + +L   ++      KL+ +  ++ L I    +
Sbjct: 205 L------------FVQVLLGQVIGAFFGAKLTRLAPQRLLKIAMVAL 239


>gi|296132842|ref|YP_003640089.1| protein of unknown function DUF81 [Thermincola sp. JR]
 gi|296031420|gb|ADG82188.1| protein of unknown function DUF81 [Thermincola potens JR]
          Length = 118

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 40/90 (44%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
             + I      H+A G SL    PTS+++ + H RHG ++ ++         I  V  S 
Sbjct: 26  PALIITMGFSQHMAQGISLASFLPTSLVAVITHYRHGNVDTRLAFSLAVTSVIGAVGGSY 85

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           +  ++    L + F  F ++MG+  +   +
Sbjct: 86  LAHYISAQHLRQVFGFFLIIMGLYEIFNRK 115



 Score = 38.9 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 12/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
              + G+V G +SG    GG +    L++  G S + A   S       +  A++     
Sbjct: 2   ALVLLGLVCGVISGLALGGGTLLVPALIITMGFSQHMAQGISLASFLPTSLVAVIT---- 57

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G V+      +   S++     + L++ I  ++L   F   +      
Sbjct: 58  --------HYRHGNVDTRLAFSLAVTSVIGAVGGSYLAHYISAQHLRQVFGFFLIIMGLY 109


>gi|169827938|ref|YP_001698096.1| hypothetical protein Bsph_2413 [Lysinibacillus sphaericus C3-41]
 gi|168992426|gb|ACA39966.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
          Length = 247

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 76/247 (30%), Gaps = 28/247 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +    +   +  L G GGGL+ +P +            + +H A+G +      ++ 
Sbjct: 5   LLFLFIGIIGNVIGTLVG-GGGLITLPTMMLM--------GVPVHSAIGANKVSNMVSAF 55

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            SF    +   +    ++  + V  I   +  L  S +    L    AIF L   ++M  
Sbjct: 56  SSFYTIYKRKELAWSEMQPVLLVSLIGGTLGGLFASFMSSQTL-TFIAIFLLGFALMMSF 114

Query: 144 RDRLYCERK----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
                   K            + G+  GF  G  G G              S  KA   S
Sbjct: 115 MGGADFGHKELFMMNRKNGPILLGV--GFYDGMFGPGSSTLALYTYAHEKISYIKAVGLS 172

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                 +   A +  I +G             +     LI++  S +   +   L+  + 
Sbjct: 173 RVGVFAMCSGAAITYIATGK------------IEWPLTLILMVGSTIGAQIGIVLARKVK 220

Query: 260 KKYLTIG 266
              + + 
Sbjct: 221 ANQVKLL 227


>gi|229016245|ref|ZP_04173193.1| integral membrane protein [Bacillus cereus AH1273]
 gi|228745016|gb|EEL95070.1| integral membrane protein [Bacillus cereus AH1273]
          Length = 255

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  FL+  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLIILIVFGFLASFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
               S +   R G +++K     + +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GCATSNIVFYRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNY--VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +  +   +  V GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHFIIFIFFVFVIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +  G
Sbjct: 179 AGNAKFLNLGSDIGALLMFMCVG 201



 Score = 35.8 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 49/120 (40%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G +  F+   +G GGG+     +LF G +   A AT+   S              
Sbjct: 12  ILIVFGFLASFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLAST------------M 58

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G   + +  +  G +++ +   ++P++ + + +     +++  + L     +++   +  
Sbjct: 59  GCATSNIVFYRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|152989499|ref|YP_001351080.1| hypothetical protein PSPA7_5761 [Pseudomonas aeruginosa PA7]
 gi|150964657|gb|ABR86682.1| membrane protein, putative [Pseudomonas aeruginosa PA7]
          Length = 324

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 84/252 (33%), Gaps = 21/252 (8%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +   F +  + G  G+  G+     L  A        S  +H+A          T+  S 
Sbjct: 86  VAVGFFAQVIDGALGMAYGITATTFLLSAGATP-AAASASVHIAE-------VFTTGFSG 137

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD- 145
           + H + G +N  +    +    I  V+ +++I+  D   L    + + LLMG+ +L +  
Sbjct: 138 ISHVKLGNVNKSLFLRLLLPGMIGAVLGAVLITRFDGHQLKPFISAYLLLMGLYILSKAY 197

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
           R   +R+ P +  K       GF+  A G G G      ++  G+       +       
Sbjct: 198 RQVIKRRAPRHVAKLAL--FGGFVDAAGGGGWGPVVTSSLIGSGSDPRTTIGSVNFAEFF 255

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           +   +    I      +              V  ++   +   P A  L   +  + L +
Sbjct: 256 LTIASATSFILLAGQPDT----------WKMVAGLVFGGLFAAPFAALLCKRLSPRTLLV 305

Query: 266 GFSMIMFTTSFV 277
               ++   S  
Sbjct: 306 IVGTLITLISAY 317


>gi|328676932|gb|AEB27802.1| membrane protein [Francisella cf. novicida Fx1]
          Length = 279

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 98/277 (35%), Gaps = 26/277 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  +I + + L G +  + G+GGGLV+ P+L+           + +H A+G SL  I 
Sbjct: 5   LFFELIIFIVAVLGGGIGAVIGLGGGLVITPLLTTVL-------GVPLHYAIGASLVAII 57

Query: 80  PTSVM-SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            TS   S +  + HG    K+         +  +  + +   +    L   F    +++ 
Sbjct: 58  CTSTATSLVSLQSHGLTKEKLGLFLALATAVGAIFGAKLAVMLRAKVLFLIFGGILIIVA 117

Query: 139 ILMLKRDRLYCERKFPD-----NYVKYIWGMVTGF----------LSGALGVGGGIFTNL 183
           IL   + +   E K P      N ++    +V             + G + + G  F   
Sbjct: 118 ILSFIKKKSNAETKPPKQSFIANKLQLNDSVVIAGQKQDYNVNHPILGFIFMAGAGFIGG 177

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP--WSLGFVNIGAVLIIL 241
           L+           A    +       A       G          +  G+++      + 
Sbjct: 178 LLGIGAGIFKV-VAMDKIMKIPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSITAAVA 236

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             ++L   + +KL   I  + L + F +++F ++   
Sbjct: 237 LGTLLGATIGSKLMPHIPTRALRLMFFIVVFISAIQM 273



 Score = 41.2 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I   V+  TS  ++  T+  +   +   G I+  I         +   + S ++ H+   
Sbjct: 197 IPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSITAAVALGTLLGATIGSKLMPHIPTR 256

Query: 125 FLNKAFAIFCLLMGILMLKR 144
            L   F I   +  I M+ +
Sbjct: 257 ALRLMFFIVVFISAIQMIIK 276


>gi|257460537|ref|ZP_05625638.1| inner membrane protein YfcA [Campylobacter gracilis RM3268]
 gi|257441868|gb|EEV17010.1| inner membrane protein YfcA [Campylobacter gracilis RM3268]
          Length = 253

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 45/190 (23%), Positives = 76/190 (40%), Gaps = 13/190 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
            G +  + G GGGL+ +P L            I  HVA+ T+    +  S  + +   R 
Sbjct: 18  GGFIDSIAG-GGGLISLPALLAV--------GIPPHVAIATNRFQGSFGSFTAALNFIRK 68

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL---YC 149
           G +++  +   +    I  +V + ++  +D  FLN    I  L +   M+    L     
Sbjct: 69  GYVDVAEILRGVVFTFIGGLVGAYVLLLIDAKFLNYLIPILLLALFFYMIFSPNLGEAPA 128

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAF 208
           + K        I+G+V GF  G  G G G F    ++   G  + KA A +  ++     
Sbjct: 129 KPKMSKKSFYAIFGLVLGFYDGFFGPGTGSFWTFALVGILGLYMKKAVAHTKVLNFTSNI 188

Query: 209 PALLVRIYSG 218
            +L V I  G
Sbjct: 189 VSLGVFIIGG 198


>gi|116492399|ref|YP_804134.1| permease [Pediococcus pentosaceus ATCC 25745]
 gi|116102549|gb|ABJ67692.1| Predicted permease [Pediococcus pentosaceus ATCC 25745]
          Length = 281

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/253 (11%), Positives = 82/253 (32%), Gaps = 43/253 (16%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            ++ +   + +  A+G S+  +  TS  + + + +   +N+++         +  +V ++
Sbjct: 32  PVLTVAMGLDIKYAIGASIIAVIATSSGATIAYLKDEMLNLRVAMFLEIATTVGAIVGAI 91

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRD------------------------------R 146
           M    + + L   F  F +     M ++                               +
Sbjct: 92  MTGIFNSTVLFVLFGSFLVFSSWNMYRKLRRGGGEEGSTKNDRLANQLNLNGSYYDKALK 151

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSAL 205
              + +  +           G  SG LG+G G F  + M       +  ++ATS  +  +
Sbjct: 152 KNVDYQVENVPGGSAVMFGAGLASGLLGIGSGAFKVMAMDNIMKMPLKPSSATSNLMMGV 211

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
            A  + +V  ++G     +               +    +    L +++   +  +++ +
Sbjct: 212 TAAASAMVYFFNGSIHADI------------AGPLAIGILFGAQLGSRIMQHLQPRWIRM 259

Query: 266 GFSMIMFTTSFVF 278
            F  ++       
Sbjct: 260 IFIPVLLYMGLQM 272



 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 11/132 (8%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV--AMG 72
           + D  V+ +       F +G  SGL G+G G         AF++M +D+ + M +  +  
Sbjct: 153 NVDYQVENVPGGSAVMFGAGLASGLLGIGSG---------AFKVMAMDNIMKMPLKPSSA 203

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           TS  ++  T+  S M +  +G+I+  I       +     + S ++ H+   ++   F  
Sbjct: 204 TSNLMMGVTAAASAMVYFFNGSIHADIAGPLAIGILFGAQLGSRIMQHLQPRWIRMIFIP 263

Query: 133 FCLLMGILMLKR 144
             L MG+ M+ +
Sbjct: 264 VLLYMGLQMILK 275


>gi|295704268|ref|YP_003597343.1| hypothetical protein BMD_2140 [Bacillus megaterium DSM 319]
 gi|294801927|gb|ADF38993.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 257

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 68/180 (37%), Gaps = 13/180 (7%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+  P L            +    A+ T+        + S +   + G ++ +++  
Sbjct: 28  GGGLISTPALLFL--------GLPPAAALATNKLAGTMGVLTSTIRFVKSGKVDFRVVGK 79

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK--- 159
           W   + I ++  S+ +  +  +FL     I  +L+ I  + +        +    +K   
Sbjct: 80  WFPFVFIGSLGGSITVHFLSSAFLKPVILILLVLVAIYTIFKKNWGTTSTYKPLSIKKLI 139

Query: 160 --YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
                  + GF  G LG G G F     LF G    ++  ++  ++      ALLV +Y 
Sbjct: 140 FFTALIFIIGFYDGFLGAGTGSFILFAFLFMGFDFLQSAGSAKFLNFGSNLGALLVFLYF 199


>gi|237753187|ref|ZP_04583667.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375454|gb|EEO25545.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 255

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 103/257 (40%), Gaps = 24/257 (9%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  L  +     + L+ VA+F++G +  + G GGG++ +P L  A         I    A
Sbjct: 1   MQELIANFDFYMLLLLFVAAFVAGFIDSIAG-GGGMITIPALLLA--------GISPLQA 51

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           + T+    +  S  + ++  + G IN+K    +  +  + + V ++ + +++  FL+K  
Sbjct: 52  LATNKLQSSFGSFSATLQFYKKGYINLKSGLPFAVIAFVFSAVGTISVQYIEVEFLSKVL 111

Query: 131 AIFCLLMGILMLKRDRLYCERKFP--DNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLF 187
               L+ G+  L    +    +    +     +     GF  G  G G G  F   L++ 
Sbjct: 112 PFLILIFGLYFLFSPSIKEVEQTKKLNRAYLSLAIAAVGFYDGFFGPGTGSFFMLALIVI 171

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
            G ++ ++   +   +      +L+     G  L     WS+G       L++     + 
Sbjct: 172 GGFNVIQSLGQAKLYNFSTNLASLIFFALGGHML-----WSIG-------LLMALGQFIG 219

Query: 248 TPLATKLSYMIGKKYLT 264
             L +K++   G + + 
Sbjct: 220 ANLGSKMAMRYGIRIVK 236


>gi|304317021|ref|YP_003852166.1| hypothetical protein Tthe_1572 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778523|gb|ADL69082.1| protein of unknown function DUF81 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 119

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 7/106 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++  F++G L+GLFG GGG ++VP +            I  H A  T++ +I P +V+S
Sbjct: 7   LLIIGFVTGILNGLFGAGGGTIIVPFMVFLL-------GIEDHKAHATAISIILPLTVLS 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
            + + ++G  N     +      I  ++ + +++ V   +L K F 
Sbjct: 60  SIIYIKNGIFNFPTTLNVTLGSVIGGLLGAFLLNKVPIKYLRKLFG 105



 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 13/117 (11%)

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
             +     I G VTG L+G  G GGG      M+F  G   +KA AT+  +   +   + 
Sbjct: 1   MANRIKLLIIGFVTGILNGLFGAGGGTIIVPFMVFLLGIEDHKAHATAISIILPLTVLSS 60

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
           ++ I +G              N    L +   S++   L   L   +  KYL   F 
Sbjct: 61  IIYIKNGI------------FNFPTTLNVTLGSVIGGLLGAFLLNKVPIKYLRKLFG 105


>gi|81428071|ref|YP_395070.1| putative transport protein [Lactobacillus sakei subsp. sakei 23K]
 gi|78609712|emb|CAI54758.1| Putative transport protein [Lactobacillus sakei subsp. sakei 23K]
          Length = 281

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 79/244 (32%), Gaps = 44/244 (18%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +  A+G S+  +  TS  + + + +   +N+++         +  ++ +L+   V   FL
Sbjct: 41  IKYAIGASIVAVIATSSGATIAYLKDDMLNLRVAMFLEIATTVGAIIGALLTGVVPTGFL 100

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFPDN------------------------------ 156
              F  F L     M+++ R     +                                  
Sbjct: 101 FILFGSFLLFSTYNMIQKLRGKKAEEHVGAANDQWAEKLNLNGTYYDKANQKQVDYQVEK 160

Query: 157 -YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVR 214
               +      G  SG LG+G G+F    M       +  ++ATS  +  + A  +  V 
Sbjct: 161 VPGGFAMMFGAGIASGLLGIGSGVFKVTAMDTIMKMPLKPSSATSNLMMGVTAAASATVY 220

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            +SG  L  +             L IL        + +++   +  K++ + F  I+   
Sbjct: 221 FFSGAILPEIAA--------PLALGILAG----ATVGSRIMQHLQPKFIRMIFIPILLYM 268

Query: 275 SFVF 278
               
Sbjct: 269 GLQM 272



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G  SGL G+G G+  V         M     + +  +  TS  ++  T+  S   + 
Sbjct: 169 FGAGIASGLLGIGSGVFKV-------TAMDTIMKMPLKPSSATSNLMMGVTAAASATVYF 221

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I  +I       +     V S ++ H+   F+   F    L MG+ M+ +
Sbjct: 222 FSGAILPEIAAPLALGILAGATVGSRIMQHLQPKFIRMIFIPILLYMGLQMVLK 275


>gi|189345900|ref|YP_001942429.1| hypothetical protein Clim_0357 [Chlorobium limicola DSM 245]
 gi|189340047|gb|ACD89450.1| conserved hypothetical protein [Chlorobium limicola DSM 245]
          Length = 121

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 11/125 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPTS 82
             +++    +G LSG+FGVGGG+++VP L   F        +  H A  TSL  ++ P  
Sbjct: 4   VFLLIIGIAAGLLSGMFGVGGGIIIVPALVLLF-------GMSQHSANATSLVALLLPVG 56

Query: 83  VMSFMEHRRHGTINMKILK---DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           ++  ME+ R G I  + +         L       + + S +    L KAFA+F  ++ +
Sbjct: 57  ILGVMEYYRSGKITTENIWLGLILAAGLFAGAFFGARIASSLSSDLLRKAFALFTGIVAL 116

Query: 140 LMLKR 144
            +  +
Sbjct: 117 RLWFK 121



 Score = 42.8 bits (100), Expect = 0.061,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 11/124 (8%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATS-AGVSALIAFPALLV 213
                I G+  G LSG  GVGGGI     L+L +G S + A ATS   +   +    ++ 
Sbjct: 3   TVFLLIIGIAAGLLSGMFGVGGGIIIVPALVLLFGMSQHSANATSLVALLLPVGILGVME 62

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
              SG              NI   LI+            +++  +    L   F++    
Sbjct: 63  YYRSGKITTE---------NIWLGLILAAGLFAGAFFGARIASSLSSDLLRKAFALFTGI 113

Query: 274 TSFV 277
            +  
Sbjct: 114 VALR 117


>gi|294498947|ref|YP_003562647.1| hypothetical protein BMQ_2184 [Bacillus megaterium QM B1551]
 gi|294348884|gb|ADE69213.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
          Length = 257

 Score = 62.0 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 68/180 (37%), Gaps = 13/180 (7%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+  P L            +    A+ T+        + S +   + G ++ +++  
Sbjct: 28  GGGLISTPALLFL--------GLPPAAALATNKLAGTMGVLTSTIRFVKSGKVDFRVVGK 79

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK--- 159
           W   + I ++  S+ +  +  +FL     I  +L+ I  + +        +    +K   
Sbjct: 80  WFPFVFIGSLGGSITVHFLSSAFLKPVILILLVLVAIYTIFKKNWGTTSTYKPLSIKKLI 139

Query: 160 --YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
                  + GF  G LG G G F     LF G    ++  ++  ++      ALLV +Y 
Sbjct: 140 FFTALIFIIGFYDGFLGAGTGSFILFAFLFMGFDFLQSAGSAKFLNFGSNLGALLVFLYF 199


>gi|229171722|ref|ZP_04299297.1| integral membrane protein [Bacillus cereus MM3]
 gi|228611868|gb|EEK69115.1| integral membrane protein [Bacillus cereus MM3]
          Length = 255

 Score = 62.0 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 75/203 (36%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++I   FL+  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLIILIAFGFLAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
               S +   R G +++K     + +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GCATSNIVFYRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVK--YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V     +    GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFVFTIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +  G
Sbjct: 179 AGNAKLLNLGSNVGALLMFMCVG 201


>gi|218157025|gb|ACK58449.1| probable sulfate transporter [Corynebacterium stationis]
          Length = 318

 Score = 62.0 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 89/250 (35%), Gaps = 21/250 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +  I +A F +  + G  G+G G+    +L     L     S  +H A         
Sbjct: 1   MPTLIFIAIAGFAAQLVDGGIGMGFGVTSTTLLIFLAGLGPAQASAVVHAAE-------L 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA-FAIFCLLMG 138
            T+++S   H R G ++ KI+        I   V + ++S++           I  L+  
Sbjct: 54  GTTLVSGFSHWRFGNVDWKIVFSLAIPGGIAAFVGATLLSNLSMEAAQPITSGILLLIAI 113

Query: 139 ILMLKRDRLYCERKFPD----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA-SIY 193
            L+ +  R + +R   +         + G V G +    G G G  T   +L  G     
Sbjct: 114 NLIWRFSRGHIKRTISNKPHAKPFLVVLGSVGGMVDATGGGGWGPVTTSTLLAAGKEKPS 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +   T +    L+   A +   +  W             ++GA++ +L    +  P+A  
Sbjct: 174 RIVGTVSAAEFLVTLGATIGFAFGLWEDIVA--------HLGAIVAMLIGGSIAAPIAAW 225

Query: 254 LSYMIGKKYL 263
           L   +    L
Sbjct: 226 LISRLNPIVL 235


>gi|37527073|ref|NP_930417.1| hypothetical protein plu3188 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36786506|emb|CAE15562.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 267

 Score = 62.0 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 102/261 (39%), Gaps = 25/261 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +   L+ + + ++G +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 10  EVYVLLFLVAVMAGFIDSISG-GGGLLTIPALLSV--------GVSPVQALATNKLQAVG 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R+G +++K  +  I +  + ++  ++++  +   FL +   +  +++G+ 
Sbjct: 61  GSFSASLYFVRYGEVDIKSQRFAILMTLLGSMAGAIIVQFIKPDFLCQLLPVLVIIIGLY 120

Query: 141 MLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L    +  E   R+        + G   G   G  G G G F  L  ++  G ++ K+T
Sbjct: 121 FLLTPAIGMEDRHRRLTPVVFALLVGSGLGLYDGIFGPGVGSFYALAYVVLCGYNLAKST 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++      +L + I  G             V     L++L   ++   L   L  
Sbjct: 181 AHAKVLNFASNIGSLALFILGGQ------------VLWVLGLVMLAGQVIGARLGASLVL 228

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G+K +     +I F  S  
Sbjct: 229 THGQKLIRPMIVIISFLMSIK 249


>gi|77024976|gb|ABA61403.1| conserved hypothetical membrane protein [uncultured marine group II
           euryarchaeote HF70_59C08]
          Length = 265

 Score = 62.0 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 88/264 (33%), Gaps = 25/264 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++V  F  G +    G+GGG++ VP+L        I   + +     TSL +    S  
Sbjct: 8   IVLVLVFTVGFVFAPLGLGGGMLFVPILHYIAGW-PISGELIL-----TSLMLTGVVSWG 61

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF---LNKAFAIFCLLMGILM 141
           S + HRR G ++  I+K  +       V+ ++++S +D            +         
Sbjct: 62  SGLVHRREGLMDESIVKIALRGAIPGAVLGAIIVSLLDDKLDFTFKLVTMVVVGWANYKT 121

Query: 142 LKRDRLYCER-------KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            K+ R    +       +  + +V    GM     S      G I+  +   + G    K
Sbjct: 122 WKKMRGESSQISEPMQTELREGWVTTGAGMGGLACSSMAIGAGAIYIPVFHEYGGLRARK 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A  TS G    +   A+L           LP W+        ++ +            K 
Sbjct: 182 AIGTSLGTMMFVVPTAILSHAI--LLQGQLPDWAW-------LVSLPLAVFAGANSGAKF 232

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
                   +   F +++      +
Sbjct: 233 GMRFDDGVILKCFLVLISIIFIRY 256


>gi|323136515|ref|ZP_08071597.1| protein of unknown function DUF81 [Methylocystis sp. ATCC 49242]
 gi|322398589|gb|EFY01109.1| protein of unknown function DUF81 [Methylocystis sp. ATCC 49242]
          Length = 267

 Score = 62.0 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 95/280 (33%), Gaps = 36/280 (12%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D +  +  L  ++ F+ G L G  GVGGG +M P+L   F        I    A+GT L 
Sbjct: 6   DALHTFNPLYSLSGFVVGALVGFTGVGGGALMTPILMLFF-------GIAPATAVGTDLL 58

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT-------SLMISHVDKSFLNKA 129
             A T     + H  +GT++ +I +   +     T+VT            H     +  A
Sbjct: 59  YAAITKSNGTLVHALNGTVDWRITRRLAYGSIPATIVTLLTLAWMGKSAGHAANGLITSA 118

Query: 130 FAIFCLLMGILMLKR--------DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF- 180
                LL  + +L R                    ++    G   G +     VG G   
Sbjct: 119 LGFALLLTAVAILFRRWILDHIARHTDGLSDLQTCWLTIALGAFLGVIVSISSVGAGALG 178

Query: 181 -TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            T LL L+      +   +    +  +              + G   W +G VN   +  
Sbjct: 179 MTVLLALYPRVQTVRLVGSDIAHAVPLTL------------VAGFGHWMMGGVNWLLLFS 226

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           +L  S+    + + L+  +  ++L    + +M       +
Sbjct: 227 LLIGSLPGIAIGSHLAARVPDRFLRPVLATMMAVVGLKLS 266


>gi|295694878|ref|YP_003588116.1| protein of unknown function DUF81 [Bacillus tusciae DSM 2912]
 gi|295410480|gb|ADG04972.1| protein of unknown function DUF81 [Bacillus tusciae DSM 2912]
          Length = 253

 Score = 62.0 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 104/266 (39%), Gaps = 33/266 (12%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I +  F  G L G  G+GGG +M P+L   F        +   VA+GT L   + T  + 
Sbjct: 5   ISLGGFAVGLLIGFTGMGGGFLMTPMLILLF-------GVHPSVAVGTDLVYASITKFVG 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI--------FCLLM 137
             +H R GT++++++K          V  +  +      F      I        F ++ 
Sbjct: 58  AWQHWRQGTVDLRVVKVLAAGSVPGAVAGAAGVQIFHGWFGPGFEGIMSRVLGLAFLVVS 117

Query: 138 GILMLKRDRLYC-----ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGAS 191
            +L+L+           E   P  +     G+V G + G   VG G     L+ F Y  S
Sbjct: 118 AVLLLRAAIPGPGGGSGEMSRPAAWKLVTLGVVGGGIVGLTSVGSGSLFIALLTFLYPVS 177

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
             +   T    + +++             + GL  ++ G V++  V  +L  S+    L 
Sbjct: 178 ASRLVGTDIAHAFIVS------------AVAGLVHFAAGTVDLPLVGWLLVGSLPGIVLG 225

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
           ++LS  +  + + +G ++++  +   
Sbjct: 226 SRLSKRVPDRIVRLGLTVMLVVSGLK 251


>gi|110597797|ref|ZP_01386080.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
 gi|110340522|gb|EAT59005.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
          Length = 121

 Score = 62.0 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 11/126 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPT 81
           +  ++     +G LSG+FGVGGG+++VP +   F        +    A+GTSL  ++ P 
Sbjct: 3   LVALLAIGTFAGLLSGMFGVGGGVIIVPAMVLLF-------GMTQQSAVGTSLIALLLPV 55

Query: 82  SVMSFMEHRRHGTI---NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            V+  +E+ R G I   N+ I       L       + + + +    L KAFAIF  ++ 
Sbjct: 56  GVLGVIEYYRAGKISAENIWIGLIVAAGLFAGAFFGAKIAAQMPGDILRKAFAIFMGIVA 115

Query: 139 ILMLKR 144
           + M  +
Sbjct: 116 LQMWFK 121



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 40/123 (32%), Gaps = 11/123 (8%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA-GVSALIAFPALLVRI 215
                G   G LSG  GVGGG+     M L +G +   A  TS   +   +    ++   
Sbjct: 5   ALLAIGTFAGLLSGMFGVGGGVIIVPAMVLLFGMTQQSAVGTSLIALLLPVGVLGVIEYY 64

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            +G              NI   LI+            K++  +    L   F++ M   +
Sbjct: 65  RAGKISAE---------NIWIGLIVAAGLFAGAFFGAKIAAQMPGDILRKAFAIFMGIVA 115

Query: 276 FVF 278
              
Sbjct: 116 LQM 118


>gi|322807182|emb|CBZ04756.1| transporter [Clostridium botulinum H04402 065]
          Length = 250

 Score = 62.0 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 100/264 (37%), Gaps = 27/264 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L+  A FL+  +  + G GGGL+ +P     + + G+      H+A+GT+     
Sbjct: 1   MFTILLLCFAGFLAAIIDAIAG-GGGLITIPA----YLMAGVPP----HMALGTNKLCAT 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S+ S     + G IN+K+ K       I  ++    +  +D + LN    I  +++ +
Sbjct: 52  CSSLTSCFNFAQSGKINLKLFKILAPFSLIGAILGVNAVMGIDANCLNIIVLILLVIVAL 111

Query: 140 LMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIY 193
             L    +  +  F      +  +        GF +G  G G G      L+  +     
Sbjct: 112 FSLFSKNVGLKNNFHGLNKKNTLLGIFLSFSVGFYTGFFGPGTGAFMMIGLIGIFKFDFV 171

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+  S  ++ +    +L++  +               +N    + +    I+   L TK
Sbjct: 172 GASGNSKSLTTISNMASLILFAFHRQ------------INYKLAIPVSLAMIIGAKLGTK 219

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           ++   G K +   F+ I    +  
Sbjct: 220 IALNKGSKVIKPVFTTISILIAIK 243



 Score = 35.4 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I  SF  G  +G FG G G  M+  L   F+   +        A G S  +   +++
Sbjct: 134 LLGIFLSFSVGFYTGFFGPGTGAFMMIGLIGIFKFDFVG-------ASGNSKSLTTISNM 186

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S +    H  IN K+       + I   + + +  +     +   F    +L+ I +L 
Sbjct: 187 ASLILFAFHRQINYKLAIPVSLAMIIGAKLGTKIALNKGSKVIKPVFTTISILIAIKVLY 246

Query: 144 R 144
           +
Sbjct: 247 Q 247


>gi|325578012|ref|ZP_08148206.1| membrane protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325160245|gb|EGC72373.1| membrane protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 255

 Score = 62.0 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 50/241 (20%), Positives = 99/241 (41%), Gaps = 24/241 (9%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +P L     + G+  +    +A+GT+       ++ + +   R   +N+     
Sbjct: 27  GGGLITIPALL----MTGMPPA----MALGTNKLQAFGGALSASIYFLRKRAVNLPEFSF 78

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC---ERKFPDNYVK 159
            + V+ I +V+ +L+I ++D S + K      L +G+  L   +L     +++       
Sbjct: 79  ILLVIFIGSVIGTLLIQNLDASLIKKGLPFLILAIGLYFLFTPKLGESDRKQRISYAVFA 138

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             +G + GF  G  G G G   NL      G ++ KATA +  ++    F +L+      
Sbjct: 139 LCFGSLLGFYDGFFGPGTGSLMNLACVTLLGFNLTKATAHTKVMNLTSNFASLIFFFIG- 197

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                      G V     L+++  S++   L  K+    GK+ +     ++ F  +   
Sbjct: 198 -----------GHVIWTVGLVMMAGSLIGANLGAKMVMAKGKQLIRPMVVIMSFIMTIKM 246

Query: 279 A 279
           A
Sbjct: 247 A 247


>gi|15676344|ref|NP_273480.1| hypothetical protein NMB0432 [Neisseria meningitidis MC58]
 gi|7225656|gb|AAF40870.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|316984943|gb|EFV63899.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
 gi|325128847|gb|EGC51706.1| putative membrane protein [Neisseria meningitidis N1568]
 gi|325140946|gb|EGC63453.1| putative membrane protein [Neisseria meningitidis CU385]
 gi|325144970|gb|EGC67253.1| putative membrane protein [Neisseria meningitidis M01-240013]
 gi|325199619|gb|ADY95074.1| putative membrane protein [Neisseria meningitidis H44/76]
          Length = 262

 Score = 62.0 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 92/261 (35%), Gaps = 26/261 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  + + + ++G +  + G GGGL+ +P L     L GI        A+ T+    A  
Sbjct: 6   IILALGLVAMIAGFIDAIAG-GGGLITLPALL----LAGIPPVS----AIATNKLQAAAA 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  + +   R G I+ K          +  V  +L +S V K  L     +  + + +  
Sbjct: 57  TFSATVSFARKGLIDWKKGLPIAAASFVGGVAGALSVSLVSKDILLAVVPVLLIFVALYF 116

Query: 142 LKRDRLYCERKFPDNYVKYIWGM----VTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
           +   +L   ++       +++G+    + GF  G  G G G  F    ++  G  +  A 
Sbjct: 117 VFSPKLDGSKEGKARMSFFLFGLTVAPLLGFYDGVFGPGVGSFFLIAFIVLLGCKLLNAM 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           + +   +      +L V +  G             +       +   + +   L  + + 
Sbjct: 177 SYTKLANVACNLGSLSVFLLHGS------------IIFPIAATMAVGAFVGANLGARFAV 224

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G K +     +I  + +  
Sbjct: 225 RFGSKLIKPLLIVISISMAVK 245


>gi|119872962|ref|YP_930969.1| hypothetical protein Pisl_1470 [Pyrobaculum islandicum DSM 4184]
 gi|119674370|gb|ABL88626.1| protein of unknown function DUF81 [Pyrobaculum islandicum DSM 4184]
          Length = 256

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 78/194 (40%), Gaps = 3/194 (1%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVIAPTSVMS 85
            ++    G + G+ G GG ++ +P+L     L  + D +  +H+A+G++   +   ++ +
Sbjct: 11  AISGAAVGFVLGVIGGGGSILAIPLLLYFAGLATLTDLNTAVHLAVGSTALAVGANALAN 70

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           F+ H R G ++ +    +           + +        L  A     + + I +LKR 
Sbjct: 71  FLMHWRRGNVSPRGAAVFSAAGVPAAWAGAWLGKATRGEVLLAALGAAMVALSIWVLKRR 130

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
                 +  +       G   GFLSG LG+GGG      +++ G  + +A  TS    A 
Sbjct: 131 --AAGGRQLNLAKAGAGGAAVGFLSGFLGIGGGFLVAPALMWAGLDVKRAVGTSLAAVAA 188

Query: 206 IAFPALLVRIYSGW 219
                      SG+
Sbjct: 189 FGLTTAAEYATSGY 202


>gi|258543419|ref|YP_003188852.1| hypothetical protein APA01_23600 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634497|dbj|BAI00473.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256637555|dbj|BAI03524.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256640607|dbj|BAI06569.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256643664|dbj|BAI09619.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256646719|dbj|BAI12667.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256649772|dbj|BAI15713.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256652760|dbj|BAI18694.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655816|dbj|BAI21743.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 261

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 55/264 (20%), Positives = 104/264 (39%), Gaps = 25/264 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++ L +++  L G   GL G GG ++ VP++     +         HVA+GTS   +A  
Sbjct: 8   HLLLELMSGVLVGFTLGLIGGGGSILAVPLMVYLVGVKNP------HVAIGTSALAVAIN 61

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +++   +H R+ T+  +    +         + +     +D   L   FA+  + +GILM
Sbjct: 62  ALVGLAQHARNHTVKWRCASIFASCGIAGAFIGAAFGKTIDGKKLLLFFALLMIGVGILM 121

Query: 142 LKRDRLYCERKFP----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKAT 196
           L+       +       +      +G+ TG LSG  G+GGG      ++   G  I  A 
Sbjct: 122 LRGRHNVGCQGASCNRHNAPKVMGYGLGTGLLSGFFGIGGGFLIVPGLIASTGMPILNAV 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            TS    +   F   L  + S            G+++     + +    L +   T+ + 
Sbjct: 182 GTSLVAVSAFGFSTALSYMLS------------GYIDWQLAALFILGGALGSLFGTRTAR 229

Query: 257 MI--GKKYLTIGFSMIMFTTSFVF 278
            +     +LT  F+ I+F  +   
Sbjct: 230 RMSGSSNHLTTVFACIIFIVAIYM 253



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 9/115 (7%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
              +G LSG FG+GGG ++VP L            + +  A+GTSL  ++     + + +
Sbjct: 147 GLGTGLLSGFFGIGGGFLIVPGLIA-------STGMPILNAVGTSLVAVSAFGFSTALSY 199

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDK--SFLNKAFAIFCLLMGILML 142
              G I+ ++   +I    + ++  +     +    + L   FA    ++ I M+
Sbjct: 200 MLSGYIDWQLAALFILGGALGSLFGTRTARRMSGSSNHLTTVFACIIFIVAIYMI 254


>gi|229171140|ref|ZP_04298734.1| integral membrane protein [Bacillus cereus MM3]
 gi|228612318|gb|EEK69546.1| integral membrane protein [Bacillus cereus MM3]
          Length = 187

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 71/182 (39%), Gaps = 16/182 (8%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +     I L+I   FL+  +  + G GGGL+ +P L       G+  +     A+ T+ 
Sbjct: 2   DELSFQVIILLIAFGFLAAFIDSVVG-GGGLISLPALMFV----GLPPAS----AIATNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +   R G ++ KI+   I +  I  V  +L++  +    L     +  +
Sbjct: 53  LAATMGTFTSAVYFIRSGKVDFKIVGKLIPLTVIGAVAGALVVKFIPPDILRPLILVMLV 112

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTN--LLMLFY 188
            + I ++ +        +         + +   ++ GF  G  G G G F N  + + ++
Sbjct: 113 FIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTGSFFNFCIFINWF 172

Query: 189 GA 190
           G 
Sbjct: 173 GF 174


>gi|269839820|ref|YP_003324513.1| hypothetical protein Tter_2806 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269791550|gb|ACZ43690.1| protein of unknown function DUF81 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 295

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 89/255 (34%), Gaps = 21/255 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+ +A  ++  + G  G+  G+     L     +  +  S  +H+A          T+
Sbjct: 4   LLLVALAGCVAQLIDGSLGMAYGVTST-TLLLVVGMSPVLASASVHLAE-------IGTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++S + H + G ++  + +       +  +  +L++  +         + F   +G  ++
Sbjct: 56  LISGLSHAKFGNVDWHVARRIALPGAVGALSGALLLGRLPVHLAKIWVSAFLFCLGCYLI 115

Query: 143 KR---DRLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATAT 198
            R    R       P      + G V GFL    G G G + T  LM+       K   T
Sbjct: 116 LRFLLGRGIPHGADPSTRTLVVTGGVAGFLDAMGGGGWGPVATPTLMVASRMHPSKVVGT 175

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 L++  A L  + +          S G +    V  +L    +  P+A  L   +
Sbjct: 176 VDTSEFLVSCAASLGFLLT---------ISSGGIAFPIVACLLLGGAIAAPVAAWLVRHM 226

Query: 259 GKKYLTIGFSMIMFT 273
               L +    ++  
Sbjct: 227 HPSLLGVAVGGLILL 241


>gi|167628207|ref|YP_001678706.1| unknown yune-like protein, putative permease [Heliobacterium
           modesticaldum Ice1]
 gi|167590947|gb|ABZ82695.1| unknown yune-like protein, putative permease [Heliobacterium
           modesticaldum Ice1]
          Length = 266

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 63/273 (23%), Positives = 108/273 (39%), Gaps = 43/273 (15%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L+I    + GTL  L GVGGG ++VPVL   F    +         + TSL  I   S
Sbjct: 3   FALLIATGLVVGTLGSLVGVGGGFIVVPVLLLVFAYPHL-------WTVSTSLFFIFINS 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++S   + R   ++      +        +V + ++ H+     + AFA+  LL+ + ML
Sbjct: 56  LVSSYNYSRQKRVDFATGIPFALSTIPGALVGAHLVPHLSGKAFDSAFAMLLLLVSLFML 115

Query: 143 KRDRLYCERKFPDNYVK-----------------------YIWGMVTGFLSGALGVGGGI 179
            + +   + + P+   K                        +     GFLS   G+GGGI
Sbjct: 116 FKPQGPPKDRTPNWMGKKTTRQFTDAHGIAHEYSFSLPFGVLISFFVGFLSSIFGIGGGI 175

Query: 180 FTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
               +M    G   + ATATS  +  + +F   +            P    G V + A +
Sbjct: 176 IHVPVMTLIMGIPPHIATATSMFILTISSFAGTV------------PHLVAGDVQLVASV 223

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            +   +I+   + T+L+  +  + L   FS+IM
Sbjct: 224 ALSIGAIVGAHIGTRLAPQVNSRRLMQLFSIIM 256


>gi|157693919|ref|YP_001488381.1| hypothetical protein BPUM_3167 [Bacillus pumilus SAFR-032]
 gi|157682677|gb|ABV63821.1| hypothetical secreted protein [Bacillus pumilus SAFR-032]
          Length = 246

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 20/209 (9%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            I +H A+GTSL  +A T++     H R G I +K       +  + +   + +   + +
Sbjct: 34  DIPIHTALGTSLAAMAFTTLSGAYSHYREGNIQLKSGLIVGALACVASFAGAKIAPFIPE 93

Query: 124 SFLNKAFAIFCLLMGILMLKR----DRLYCERKFPDNYVKY---IWGMVTGFLSGALGVG 176
             L+   A    L  + M+ +         ++      +     I G+V+G LSG  G+G
Sbjct: 94  GNLHYLTAGMLFLSAVFMMIKLFVLKEETEQQPLSSRQLLVRGIILGLVSGLLSGMFGIG 153

Query: 177 GG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
                   L++    SI +A  T+  V   I+    +  I  G            +V+  
Sbjct: 154 SAPFIQVGLLILLRLSIRQAVGTTMLVIIPISIGGGIGYITEG------------YVDFI 201

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLT 264
            ++ IL  ++L   +  K + +  K  L 
Sbjct: 202 LLIQILIGTVLGAYIGAKFTRLAPKLLLK 230


>gi|118475718|ref|YP_891550.1| hypothetical protein CFF8240_0348 [Campylobacter fetus subsp. fetus
           82-40]
 gi|261885598|ref|ZP_06009637.1| hypothetical protein CfetvA_10894 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
 gi|118414944|gb|ABK83364.1| hypothetical protein CFF8240_0348 [Campylobacter fetus subsp. fetus
           82-40]
          Length = 242

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 80/220 (36%), Gaps = 22/220 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V+VP++              +  A+G S+  +  ++      + +     +K       
Sbjct: 24  TVLVPIMLAL--------GYDIKEAIGISILQMVLSATFGSFINYKSSNFILKDGFIVGL 75

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
              +   ++  ++S++ +  L     +  L + I          + K P  Y+ +I G  
Sbjct: 76  GGFVGASLSGFVVSNIQERVLEWGL-LIILAISISKFFYVNTAAKPKDPPKYILFIVGFF 134

Query: 166 TGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
           TG ++ ++G GGGI    +++ F G  I K+   S       +    +   +        
Sbjct: 135 TGVIAISMGAGGGILLTPILVGFLGMDIKKSVYISLFFVLFSSISGFVSLAFHDL----- 189

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
                  +N  A L+I   S++     TK S+ I K+   
Sbjct: 190 -------INYKAGLLIAVGSLIGVYFGTKTSHKIDKQAQK 222



 Score = 40.8 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +  F +G ++   G GGG+++ P+L      +G+D    +++    SL  +  +S+ 
Sbjct: 127 ILFIVGFFTGVIAISMGAGGGILLTPILV---GFLGMDIKKSVYI----SLFFVLFSSIS 179

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            F+    H  IN K          I     +     +DK           + M  LM+K+
Sbjct: 180 GFVSLAFHDLINYKAGLLIAVGSLIGVYFGTKTSHKIDKQAQKWWLVALYISMFGLMVKK 239


>gi|330818743|ref|XP_003291498.1| hypothetical protein DICPUDRAFT_89425 [Dictyostelium purpureum]
 gi|325078304|gb|EGC31962.1| hypothetical protein DICPUDRAFT_89425 [Dictyostelium purpureum]
          Length = 463

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 53/113 (46%), Gaps = 8/113 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ + S ++G L+ L G+GGG++  PVL      MG+   +       TS  +I  TS
Sbjct: 320 IIVLGILSIVAGILASLLGIGGGMIKGPVLL----QMGLSPDVTA----ATSSYMILFTS 371

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
             S +++   G +       +  +  I+  V +  +  + K +  +++ +F +
Sbjct: 372 ASSAIQYILVGKLRWDYGIVYYAIGFISCFVGTQTLIWIVKKYQRRSYIVFLI 424



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           V  I  +V G L+  LG+GGG+    ++L  G S     ATS+ +    +  + +  I  
Sbjct: 322 VLGILSIVAGILASLLGIGGGMIKGPVLLQMGLSPDVTAATSSYMILFTSASSAIQYILV 381

Query: 218 G---WGLNGLPPWSLGFVN 233
           G   W   G+  +++GF++
Sbjct: 382 GKLRWDY-GIVYYAIGFIS 399


>gi|170016562|ref|YP_001727481.1| permease [Leuconostoc citreum KM20]
 gi|169803419|gb|ACA82037.1| Predicted permease [Leuconostoc citreum KM20]
          Length = 275

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 85/252 (33%), Gaps = 50/252 (19%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+ P+L   F       ++ +H A+G S+  +  TS  + + + +   +N++        
Sbjct: 22  VVTPILVIGF-------NLPIHYAIGASIVAVIATSSGASIAYLKDDLLNIRTAMFLEIF 74

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI----- 161
             +  ++ +++       +LN  F I  +     M ++       +      +       
Sbjct: 75  TTVGALLGAILAGFFAPIWLNFFFGILLMYQAFRMWRKLYGKQVSETVAKPNQLAHKLQL 134

Query: 162 ---------------------WGMVT----GFLSGALGVGGGIFTNLLM-LFYGASIYKA 195
                                 G +     G  SG LG+G G+F    M       +  +
Sbjct: 135 NASYYDKALGKQIDYHVENVFLGSLIMLWAGLASGLLGIGSGMFKVFAMDSVMKMPLKPS 194

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +ATS  +  + A  + LV  ++G             + +   L I    I+   +  ++ 
Sbjct: 195 SATSNLMMGVTASASALVYFFNGTVRAD--------IAVPIALGI----IVGATIGARMM 242

Query: 256 YMIGKKYLTIGF 267
             +  ++L   F
Sbjct: 243 PHVSTRHLRQLF 254



 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 11/131 (8%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV--AMGT 73
            D  V+ + L  +    +G  SGL G+G G+         F++  +D  + M +  +  T
Sbjct: 147 IDYHVENVFLGSLIMLWAGLASGLLGIGSGM---------FKVFAMDSVMKMPLKPSSAT 197

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           S  ++  T+  S + +  +GT+   I       + +   + + M+ HV    L + F   
Sbjct: 198 SNLMMGVTASASALVYFFNGTVRADIAVPIALGIIVGATIGARMMPHVSTRHLRQLFIPV 257

Query: 134 CLLMGILMLKR 144
             L GI +L +
Sbjct: 258 VGLAGIQLLLK 268


>gi|168179297|ref|ZP_02613961.1| putative membrane protein [Clostridium botulinum NCTC 2916]
 gi|182669747|gb|EDT81723.1| putative membrane protein [Clostridium botulinum NCTC 2916]
          Length = 250

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 100/264 (37%), Gaps = 27/264 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L+  A FL+  +  + G GGGL+ +P     + + G+      H+A+GT+     
Sbjct: 1   MFTILLLCFAGFLAAIIDAIAG-GGGLITIPA----YLMAGVPP----HMALGTNKLCAT 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S+ S     + G IN+K+ K       I  ++    +  +D + LN    I  +++ +
Sbjct: 52  CSSLTSCFNFAQSGKINLKLFKILAPFSLIGAILGVNAVMGIDANCLNIIVLILLVIVAL 111

Query: 140 LMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIY 193
             L    +  +  F      +  +        GF +G  G G G      L+  +     
Sbjct: 112 FSLFSKNVGLKNNFHGLNKKNTLLGIFLSFSVGFYTGFFGPGTGAFMMIGLIGVFKFDFV 171

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+  S  ++ +    +L++  +               +N    + +    I+   L TK
Sbjct: 172 GASGNSKSLTTISNMASLILFAFHRQ------------INYKLAIPVSLAMIIGAKLGTK 219

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           ++   G K +   F+ I    +  
Sbjct: 220 IALNKGSKVIKPVFTTISILIAIK 243



 Score = 35.4 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I  SF  G  +G FG G G  M+  L   F+   +        A G S  +   +++
Sbjct: 134 LLGIFLSFSVGFYTGFFGPGTGAFMMIGLIGVFKFDFVG-------ASGNSKSLTTISNM 186

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S +    H  IN K+       + I   + + +  +     +   F    +L+ I +L 
Sbjct: 187 ASLILFAFHRQINYKLAIPVSLAMIIGAKLGTKIALNKGSKVIKPVFTTISILIAIKVLY 246

Query: 144 R 144
           +
Sbjct: 247 Q 247


>gi|323698787|ref|ZP_08110699.1| protein of unknown function DUF81 [Desulfovibrio sp. ND132]
 gi|323458719|gb|EGB14584.1| protein of unknown function DUF81 [Desulfovibrio desulfuricans
           ND132]
          Length = 309

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 52/304 (17%), Positives = 101/304 (33%), Gaps = 60/304 (19%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M        V+   +  +  F+ G LSG+FGVGGG +M P+L     + GI  +    VA
Sbjct: 4   MYLPIAGNSVNVFLVFALGGFV-GLLSGIFGVGGGFLMTPLLI----MFGIPPT----VA 54

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS-----F 125
             +    I   S    + H R G ++ K+    +    +       +I  +         
Sbjct: 55  AASDSNQIVGASTSGCLAHYRLGNVDFKMGILLLVGGVLGGFGGVQVIKVLKAMGNADFL 114

Query: 126 LNKAFAIFCLLMGILMLKRDRLYCERKFPDN----------------------------- 156
           +N  + +    +G  M         +K P+                              
Sbjct: 115 INVTYVLMLGGVGSYMFIESVQSLRKKEPEPGAAARPVRKSRYAVMMEKLPFQTDFVKSG 174

Query: 157 -----YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPA 210
                 +  + G++ G L+  +GVGGG     +M++     ++    TS           
Sbjct: 175 VRLSMLMPLVLGVLVGVLAAIMGVGGGFIMVPIMVYLLRMPMHVVVGTSLFQILFTCI-- 232

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
                     +  L  ++   V+    +++L  S L     T++S  +  + L I  + +
Sbjct: 233 ---------NVTILQSYTNHTVDFVLAVLLLLGSTLGAQFGTRISRKLKGEQLKILLATL 283

Query: 271 MFTT 274
           +   
Sbjct: 284 VLAV 287



 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 49/115 (42%), Gaps = 8/115 (6%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV-MSFMEHRRHGTI 95
           + + GVGGG +MVP++    +       + MHV +GTSL  I  T + ++ ++   + T+
Sbjct: 193 AAIMGVGGGFIMVPIMVYLLR-------MPMHVVVGTSLFQILFTCINVTILQSYTNHTV 245

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           +  +    +    +     + +   +    L    A   L + + ML    +  +
Sbjct: 246 DFVLAVLLLLGSTLGAQFGTRISRKLKGEQLKILLATLVLAVMVKMLLNLLVTPD 300


>gi|227502881|ref|ZP_03932930.1| protein of hypothetical function DUF81 [Corynebacterium accolens
           ATCC 49725]
 gi|227076611|gb|EEI14574.1| protein of hypothetical function DUF81 [Corynebacterium accolens
           ATCC 49725]
          Length = 339

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 87/247 (35%), Gaps = 22/247 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + LI VA   +  + G  G+G G+      +    L G+  +    V     LG    T+
Sbjct: 4   LILIAVAGAAAQLVDGGIGMGFGVTS----TTILLLAGLGPAQASAVVHTAELG----TT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            MS + H R G ++ K +        I   + + ++S++         A+  + +G  ++
Sbjct: 56  AMSGLSHARFGNVDWKTVFRLGVPGAIAAFIGATVLSNISTDAAAPITALILVAIGSNLI 115

Query: 143 -----KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS-IYKAT 196
                 R   + +++          G V GF+    G G G  +   ++  G     +  
Sbjct: 116 WRFSRPRRAKFVQKRSHSTPFLIGLGSVGGFVDSTGGGGWGPVSTSTLMAIGREQPRRIV 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T      L+   A L  +   W             N+ AVL +L    +  P+A  +  
Sbjct: 176 GTVNTAEFLVTLGATLGFVVGLWQDIVA--------NLSAVLALLIGGSIAAPIAAWVIS 227

Query: 257 MIGKKYL 263
            I    L
Sbjct: 228 RIEPVVL 234


>gi|297184323|gb|ADI20440.1| predicted permeases [uncultured alpha proteobacterium EB080_L43F08]
          Length = 251

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 82/239 (34%), Gaps = 24/239 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +PV+  A         +   VA+GT+       +  + +     G +N++ L  
Sbjct: 28  GGGLLTIPVMLIA--------GVPPLVALGTNKLQGLFGTASATITFAMKGHLNIRALWP 79

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD---RLYCERKFPDNYVK 159
                   ++  +L+ S++ +  L        + + +             +   P   + 
Sbjct: 80  IALFCFFASMFGALIASYIPEKKLAIFLPYILIAIALYFALSKNTNNPNKKPILPFFILA 139

Query: 160 YIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            I   + GF  G  G G G F     +   G  I +ATA +  ++        +      
Sbjct: 140 CIILPIIGFYDGVFGPGAGSFYMLAFISIGGLGIIQATAQTKLMNFSSNIGGFIYFAI-- 197

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                     +G +N    L +    I+ + +  +L+   G K +     ++   T+  
Sbjct: 198 ----------IGAINWEIGLTMALGQIIGSTIGARLAINKGAKIIKPLLVIVCILTALR 246



 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 34/104 (32%), Gaps = 12/104 (11%)

Query: 176 GGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           GGG+ T  +ML  G     A  T+          A +                 G +NI 
Sbjct: 28  GGGLLTIPVMLIAGVPPLVALGTNKLQGLFGTASATITFAMK------------GHLNIR 75

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           A+  I       +     ++  I +K L I    I+   +  FA
Sbjct: 76  ALWPIALFCFFASMFGALIASYIPEKKLAIFLPYILIAIALYFA 119


>gi|242374004|ref|ZP_04819578.1| membrane protein [Staphylococcus epidermidis M23864:W1]
 gi|242348255|gb|EES39857.1| membrane protein [Staphylococcus epidermidis M23864:W1]
          Length = 258

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/243 (20%), Positives = 94/243 (38%), Gaps = 26/243 (10%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +  +  + G GGGL+  P L       G+  S    VA+GT+      +++ S  +  R 
Sbjct: 18  ASFIDSVVG-GGGLISTPALLAV----GLPPS----VALGTNKFASFFSTLTSAYKFLRS 68

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           G +++K++      + I +   +++ +++    L     +   L+ I  + +      R 
Sbjct: 69  GKVDLKVVGKLFPFVFIASGGGAILATYLPAEVLKPLIIVILTLVIIYTVFKKDWGSVRT 128

Query: 153 FPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
           F         +  I   + GF  G LG G G F    +L +G     A   +  ++    
Sbjct: 129 FTSLTIGKAIILVILFSILGFYDGFLGGGTGSFMLFALLMFGFDFLSAAGNAKVLNFASN 188

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
             A+L+ I             LG VN    L++    I+ + L    +   G  Y+ I F
Sbjct: 189 GGAILLFII------------LGQVNYAYGLLMAVSMIVGSYLGAHFALKKGVGYVKILF 236

Query: 268 SMI 270
            ++
Sbjct: 237 IVV 239


>gi|17988461|ref|NP_541094.1| hypothetical protein BMEII0117 [Brucella melitensis bv. 1 str. 16M]
 gi|17984248|gb|AAL53358.1| hypothetical membrane spanning protein [Brucella melitensis bv. 1
           str. 16M]
          Length = 259

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 83/264 (31%), Gaps = 49/264 (18%)

Query: 45  GLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWI 104
           G+ +VP+L+  F        I +HVA+  SL  +   S  S     +    N+++     
Sbjct: 4   GIFIVPLLTSIF-------GIDIHVAIAASLISVIACSCGSAAPLLKERLTNIRLAVVLE 56

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP---------- 154
               +       +I  +  ++L   FAI  +L    ML R R   +   P          
Sbjct: 57  TATTLGAFTGVFLIGVIPTAYLYLMFAIILVLSAWQMLVRRREMPQTNRPASRTWATLLR 116

Query: 155 ----------DNYVKYIWGMV---------TGFLSGALGVGGGIFTNLLM-LFYGASIYK 194
                       +  Y  G +          G +S  LG+G G+     M       I  
Sbjct: 117 LHSAVPDRSSGKFTSYQVGSLPLGLSLMYGAGLVSALLGIGSGVLKIPAMDTALRLPIKV 176

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           ++A S  +  +    +                +  G +N      +   S+L      ++
Sbjct: 177 SSAASNFMIGVTGAASAGAY------------FMRGDINTAIAGPVALGSVLGAVAGARI 224

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
              I    L I F +++   +   
Sbjct: 225 LTGISGDKLRIFFVIVLVLLAIAM 248



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G +S L G+G G++ +P +  A +L        + V+   S  +I  T   S   +   
Sbjct: 147 AGLVSALLGIGSGVLKIPAMDTALRL-------PIKVSSAASNFMIGVTGAASAGAYFMR 199

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           G IN  I         +  V  + +++ +    L   F I  +L+ I M
Sbjct: 200 GDINTAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAIAM 248


>gi|283852330|ref|ZP_06369601.1| protein of unknown function DUF81 [Desulfovibrio sp. FW1012B]
 gi|283572287|gb|EFC20276.1| protein of unknown function DUF81 [Desulfovibrio sp. FW1012B]
          Length = 312

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 91/282 (32%), Gaps = 59/282 (20%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG +M P+L     +MGI  +    VA  +    I   S    + H R G ++
Sbjct: 32  SGIFGVGGGFLMTPLLM----MMGIPAT----VAAASDSNQIVGASTSGTLIHLRLGNVD 83

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFCLLMGILMLKR------- 144
           +++    +    +   +   +I  +         ++  + +    +G  M          
Sbjct: 84  VRMGVLLLIGGVLGGTLGVQLIKILRAMGNADFLISITYVLMLGGVGSYMFFESLSSMRK 143

Query: 145 -DRLYCERKFPDNYVKYI--------------------------WGMVTGFLSGALGVGG 177
             R    +  P     Y                           +G + G LS  +GVGG
Sbjct: 144 AKRPSQAQAAPARPSAYARFMASLPWQMDFPRSGIRQSALTPLFFGTLVGVLSAIMGVGG 203

Query: 178 GIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G     +M++     ++    TS            +        +      ++ FV    
Sbjct: 204 GFIMVPVMVYMLRMPMHVVVGTSLFQVLFTCINVTI--------MQSAENHTVDFV---L 252

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            L++L  S +      ++   +    L I  + I+    F  
Sbjct: 253 ALLLLIGSAIGAQFGARIGRKLQGDQLKIYLAGIVLVVMFKM 294



 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 8/118 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +    L G LS + GVGGG +MVPV+    +       + MHV +GTSL  +  T +   
Sbjct: 186 LFFGTLVGVLSAIMGVGGGFIMVPVMVYMLR-------MPMHVVVGTSLFQVLFTCINVT 238

Query: 87  MEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +        ++  +    +    I     + +   +    L    A   L++   ML 
Sbjct: 239 IMQSAENHTVDFVLALLLLIGSAIGAQFGARIGRKLQGDQLKIYLAGIVLVVMFKMLY 296


>gi|146292630|ref|YP_001183054.1| hypothetical protein Sputcn32_1530 [Shewanella putrefaciens CN-32]
 gi|145564320|gb|ABP75255.1| protein of unknown function DUF81 [Shewanella putrefaciens CN-32]
          Length = 257

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 78/209 (37%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  +  +    L+   + ++G +  + G GGGL+ +P L  A         +   VA+GT
Sbjct: 1   MEFELTLQIAVLLFTVAMVAGFIDSIAG-GGGLLTIPALMWA--------GLPPAVALGT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  + +   R G +++K +K  +    I   + ++++  VD   L       
Sbjct: 52  NKLQACGGSFFASLYFVRKGLVDLKSVKLALTCAFIGAALGTILVQLVDTKVLELMLPFL 111

Query: 134 CLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
            L +G   L   ++  + K          +      G   G  G G G  F    +   G
Sbjct: 112 ILAIGCYFLFSKKISEDDKHQVLTPTAFAFTAAFGVGLYDGFFGPGTGSFFALAFVSLAG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             + KATA +  ++      +L+     G
Sbjct: 172 FGLAKATAHAKLLNFSTNIASLIFFALGG 200


>gi|258514257|ref|YP_003190479.1| hypothetical protein Dtox_0967 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257777962|gb|ACV61856.1| protein of unknown function DUF81 [Desulfotomaculum acetoxidans DSM
           771]
          Length = 303

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 8/128 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++     L G L+ L GVGGG +M+PV+            +  H A+GTS+ VI  T++
Sbjct: 174 IVLFALGLLVGVLAALMGVGGGFIMLPVMIYLI-------GMPTHNAVGTSIFVIIFTAI 226

Query: 84  MSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              + +      +++ +    +    I     + +   +    L   F+   LL+ + ML
Sbjct: 227 NVTVANSALNHTVDLVLAMVLLVGSSIGAQFGAKLGKKLKAEQLRVVFSAIVLLVMVKML 286

Query: 143 KRDRLYCE 150
               +   
Sbjct: 287 VDLLVTPA 294



 Score = 37.7 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 34/270 (12%), Positives = 78/270 (28%), Gaps = 80/270 (29%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
              ++G+  +    VA+ +    I   S    + H ++  ++ K+    +    +   + 
Sbjct: 42  LLMMLGVPPA----VAVASDTNQIVAASASGTLAHAKNKNVDFKLGFIILIGGLVGGSLG 97

Query: 115 SLMISHVDKS-----FLNKAFAIFCLLMGILMLKRDRLYCERK----------------- 152
           + ++  +         L  ++ +  L++G  M         +K                 
Sbjct: 98  TALVKVLRAMGNFDFVLKSSYVVMLLVVGTFMFIESINSLRKKDDTGSGKPSAVKRFMDK 157

Query: 153 ------------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
                            V +  G++ G L+  +GVGGG                      
Sbjct: 158 MPVKMYFEVSGIESSAIVLFALGLLVGVLAALMGVGGGFIM------------------- 198

Query: 201 GVSALIAFPALLVRI-YSGWGLNGLPPWSLGF---------------VNIGAVLIILPIS 244
                   P ++  I        G   + + F               V++   +++L  S
Sbjct: 199 -------LPVMIYLIGMPTHNAVGTSIFVIIFTAINVTVANSALNHTVDLVLAMVLLVGS 251

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            +      KL   +  + L + FS I+   
Sbjct: 252 SIGAQFGAKLGKKLKAEQLRVVFSAIVLLV 281


>gi|254702037|ref|ZP_05163865.1| hypothetical protein Bsuib55_14424 [Brucella suis bv. 5 str. 513]
          Length = 257

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 93/255 (36%), Gaps = 23/255 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+  A+F++G +  + G GGG++ +P L     L GI        A+GT+       S 
Sbjct: 10  LLLTAAAFIAGIIDSIAG-GGGMITIPALL----LAGIPPVE----ALGTNKLQGLFGSS 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + R G +N+           +  ++ +++  ++ ++ L        +   +    
Sbjct: 61  SATIAYARKGHVNILQQWPEALASVLGALLATVLPVNIMRAALPMLLIAIAIYFALKPSL 120

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGV 202
            D     R  P  +   +   + GF  G  G G G  F    + F G  + KATA +  +
Sbjct: 121 GDVDRARRIGPFLFGVTLV-PLIGFYDGLFGPGTGSFFMLAFVAFAGYGVLKATAHTKLL 179

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
           +       L                ++G +N    + +     +   +  +L+  IG + 
Sbjct: 180 NCASNIGGLATFA------------AVGVINWKIGISMGIAQFIGAQIGARLAMKIGSRI 227

Query: 263 LTIGFSMIMFTTSFV 277
           +     ++    +  
Sbjct: 228 IKPLLIVVSLALAGR 242


>gi|228919792|ref|ZP_04083151.1| integral membrane protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228839879|gb|EEM85161.1| integral membrane protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 255

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SILIILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFALLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNVGALLMFMYVG 201



 Score = 35.4 bits (81), Expect = 9.9,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|311739830|ref|ZP_07713664.1| conserved membrane protein YtnM [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311304903|gb|EFQ80972.1| conserved membrane protein YtnM [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 349

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 78/230 (33%), Gaps = 22/230 (9%)

Query: 41  GVGGGLVMVPVLSKAFQLMGIDDSICM-HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
           G+G G  +          +G   +  + H A          T+ +S + H R G ++ K 
Sbjct: 20  GIGMGFGVTSTTILLLAGLGPAQASAVVHTAE-------LGTTAISGLSHARFGNVDWKT 72

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-----KRDRLYCERKFP 154
           +        I   + + ++S++  +      A+  + +G  ++      R R    ++  
Sbjct: 73  VVRLGVPGGIAAFLGATLLSNISTAAAAPVTALILVGIGANLIWRFSQPRRRGSAYKRTH 132

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS-IYKATATSAGVSALIAFPALLV 213
                   G+V GF+    G G G  +   ++  G     +   T      L+ F A   
Sbjct: 133 STPFLAGLGLVGGFVDSTGGGGWGPVSTSTLMAIGREQPRRIVGTVNAAEFLVTFGATAG 192

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            I   W             N+ AV+ +L    +  P+A  L   I    L
Sbjct: 193 FIVGLWHDIVA--------NLAAVIALLIGGAITAPIAAWLISRINPVLL 234


>gi|268315841|ref|YP_003289560.1| hypothetical protein Rmar_0266 [Rhodothermus marinus DSM 4252]
 gi|262333375|gb|ACY47172.1| protein of unknown function DUF81 [Rhodothermus marinus DSM 4252]
          Length = 265

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 86/244 (35%), Gaps = 27/244 (11%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VPVL                VA+  SLG++A  +    + + R  TI+ + +  +  
Sbjct: 24  ILTVPVLVYLV-------GEPDKVAIAESLGIVAAIAAAGALPYARQRTIDWRSVLFFGI 76

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW--- 162
              + T   + +   V        FA   LL  +LM +R         P      +    
Sbjct: 77  PGIVGTYGGAWLSRFVSGPVQLVLFAGVMLLAAVLMYRRSTPRPVPTPPSAGGVTVTARK 136

Query: 163 ---------GMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALL 212
                    G+  G L+G +GVGGG      ++   G  + +A  TS  + AL +    L
Sbjct: 137 HAAWKIMLEGVSVGVLTGLVGVGGGFLIVPALVLLGGLDMRRAVGTSLIIIALKSVAGYL 196

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             +      + L    L  VN   V +   + I  +     +   I +  L  GF++ + 
Sbjct: 197 KYL------DVLADLGL-AVNWEVVGLFAIVGIAGSFAGNWIGGRIPQHRLQRGFAVFLV 249

Query: 273 TTSF 276
               
Sbjct: 250 VMGL 253



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 12/105 (11%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR-----RHGTINMKIL 100
            ++VP L            + M  A+GTSL +IA  SV  ++++          +N +++
Sbjct: 162 FLIVPALVLL-------GGLDMRRAVGTSLIIIALKSVAGYLKYLDVLADLGLAVNWEVV 214

Query: 101 KDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
             +  V    +   + +   + +  L + FA+F ++MG+ +L ++
Sbjct: 215 GLFAIVGIAGSFAGNWIGGRIPQHRLQRGFAVFLVVMGLWILYQN 259


>gi|298527660|ref|ZP_07015064.1| protein of unknown function DUF81 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511312|gb|EFI35214.1| protein of unknown function DUF81 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 254

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 98/264 (37%), Gaps = 26/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++Y   +    F+S  +  + G+GGGL+  P+                  A+ +SL + A
Sbjct: 1   MEYALWLYPLIFVSSFVLSMAGLGGGLIFAPLFLLV--------GFAQSSAVASSLLLNA 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  +   + R   ++  +    +    +   + ++    VD+       ++   L  +
Sbjct: 53  LAATTASYVYIRKRMVDFSLSIPLVISSGLAAPIGAMCTRWVDEGVFLCVMSVVLFLAAV 112

Query: 140 LMLKRDRLYCE------RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
            M+    +  +                  G+V GF++G LG+GGG+F   L+++    + 
Sbjct: 113 RMMFVGGVAGQGTRAHVWSLARVLQASFLGLVIGFMAGMLGIGGGVFVVPLLIYM---LQ 169

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
               T+A  +A I   +      +   +  L        +   +++    S       ++
Sbjct: 170 VNPRTAAATTAFIVCFSSYAGFATHVAVTPL--------DWKFLVLAGIFSSAGGLAGSR 221

Query: 254 L-SYMIGKKYLTIGFSMIMFTTSF 276
           L S  +   ++   F++++F  S 
Sbjct: 222 LMSSRLSGAFVRKLFALVLFFLSL 245



 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 8/118 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
               + G ++G+ G+GGG+ +VP+L    Q       +    A  T+  ++  +S   F 
Sbjct: 140 FLGLVIGFMAGMLGIGGGVFVVPLLIYMLQ-------VNPRTAAATTAFIVCFSSYAGFA 192

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            H     ++ K L           +  S LM S +  +F+ K FA+    + + ++ +
Sbjct: 193 THVAVTPLDWKFLVLAGIFSSAGGLAGSRLMSSRLSGAFVRKLFALVLFFLSLHLMYQ 250


>gi|222148947|ref|YP_002549904.1| hypothetical protein Avi_2642 [Agrobacterium vitis S4]
 gi|221735933|gb|ACM36896.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 261

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 88/252 (34%), Gaps = 25/252 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  +  +  +  A+F++G +  + G GGGL+ +P +  A    GI         +GT+  
Sbjct: 3   DIAIQALIFLFFAAFIAGFVDSIAG-GGGLITIPAMLIA----GIPPLET----LGTNKL 53

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                S  + + + R G +N+K       +  +   + +++ ++V    L        + 
Sbjct: 54  QGMFGSASATIAYGRKGHVNLKKQLPMAAMSVLGGAIGAVIATYVPGDVLKALMPFLLVA 113

Query: 137 MGILMLKRDRLY---CERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
           +      +  +      ++            +     G  G G G       +   G  +
Sbjct: 114 IAAYFALKPNISDVDSHQRMTPFLFGLTLAPLIAIYDGVFGPGTGSFLMLAFVSLAGFGM 173

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            KATA +  ++      A LV +++G             V     +++     L     +
Sbjct: 174 LKATAHTKLLNFGSNVGAFLVFVFNGV------------VLWKIGIVMGIGQFLGAQTGS 221

Query: 253 KLSYMIGKKYLT 264
           KL+   G K + 
Sbjct: 222 KLAMKSGAKIIK 233


>gi|158521389|ref|YP_001529259.1| hypothetical protein Dole_1378 [Desulfococcus oleovorans Hxd3]
 gi|158510215|gb|ABW67182.1| conserved hypothetical protein [Desulfococcus oleovorans Hxd3]
          Length = 121

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 8/120 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +   L G  +   G+GGG +M+P L  A              A+GTS   I   S+ +
Sbjct: 10  MALFGVLVGIGASFSGLGGGFLMIPFLLFA--------GYAAQKAVGTSFVAIMVISISA 61

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H +   ++ +          +   + + ++ HV      K FA+  + + + M  + 
Sbjct: 62  LFAHNKLANVDYRAGILLGIGGVLGAQIGARLVEHVSTDMFRKIFAVILVGLAVYMFFKK 121



 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 12/124 (9%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
                 ++G++ G  +   G+GGG      +LF G +  KA  TS     +I+  AL   
Sbjct: 6   GMAGMALFGVLVGIGASFSGLGGGFLMIPFLLFAGYAAQKAVGTSFVAIMVISISALFA- 64

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                         L  V+  A +++    +L   +  +L   +        F++I+   
Sbjct: 65  -----------HNKLANVDYRAGILLGIGGVLGAQIGARLVEHVSTDMFRKIFAVILVGL 113

Query: 275 SFVF 278
           +   
Sbjct: 114 AVYM 117


>gi|299065180|emb|CBJ36345.1| conserved membrane protein of unknown function, DUF81 [Ralstonia
           solanacearum CMR15]
          Length = 252

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 103/264 (39%), Gaps = 27/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS-LGVIAPT 81
             L+ VA FL+G +  + G GGGLV +P L  A+       ++     +GT+ L  ++ T
Sbjct: 3   FVLLAVAGFLAGLIDAVAG-GGGLVQIPALFSAY------PNLAPATLIGTNKLASMSGT 55

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  +   + R   I        +    + +++ +  ++H+    L +A     +L+ +  
Sbjct: 56  ATAAAR-YGRTVRIYWSATAPAVVTAFLCSLLGAWALTHIPAEPLRRALPFVLVLLLVYT 114

Query: 142 LKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
           + +  L  E         +  V  + G + GF  G  G G G     + +  +G     A
Sbjct: 115 VAKKDLGAEHAPSLAGWRERGVALLAGAIIGFYDGVFGPGTGSFLMIVFVRVFGYDFLHA 174

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +A++  V+      ALL+              S G V     L++   ++L     + L+
Sbjct: 175 SASTKIVNLATNVAALLLLA------------SKGHVWWQLGLVMAVANVLGNQAGSHLA 222

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G +++   F  ++       A
Sbjct: 223 LKHGSRFVRKVFIAVVLALILKTA 246


>gi|153834107|ref|ZP_01986774.1| adenylosuccinate synthetase [Vibrio harveyi HY01]
 gi|148869572|gb|EDL68567.1| adenylosuccinate synthetase [Vibrio harveyi HY01]
          Length = 251

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 92/261 (35%), Gaps = 26/261 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +   S ++ TL+ L G G GL+  P+L            +   VA+GT         +
Sbjct: 7   LTLFFGSLVANTLASLSGGGAGLLQFPLLIFL--------GLPFSVALGTHKVASVALGL 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   H + GTI  KI    I V  I  V+ + +I  +      K      L +GI    
Sbjct: 59  GAASTHLKAGTIKPKIALYLILVGSIGVVIGANLIVQIPDDIAEKMLGAMILALGIYSRF 118

Query: 144 RD-----RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
           +       L   R         +  M+ G ++G+L  G G+   L ++ ++G    +A A
Sbjct: 119 KKELGQVELATHRDTLGWITGGLVLMLIGVVNGSLTAGSGLLVTLFLVRWFGYDYKQAVA 178

Query: 198 -TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T   V         +  + +G             ++   + ++L  S L   L    + 
Sbjct: 179 YTMICVGLFWNGIGGVAVVQAGAP-----------IHWAWLPVLLLSSFLGGSLGAWAAT 227

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
               + + I F ++ F     
Sbjct: 228 RYSNRVIKIAFEVLTFAVGIK 248


>gi|163853442|ref|YP_001641485.1| hypothetical protein Mext_4044 [Methylobacterium extorquens PA1]
 gi|163665047|gb|ABY32414.1| protein of unknown function DUF81 [Methylobacterium extorquens PA1]
          Length = 305

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 15/201 (7%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S + H R G ++  + +  +    I  V  + +++ VD   +    +I+ L MG
Sbjct: 111 IFTTAFSGLSHWRLGNVDGPLFRRLLIPGVIGAVAGATLLTSVDGETIKPFVSIYLLGMG 170

Query: 139 ILMLKR--DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           + +L +    L   R  P   V    G   GF+    G G G      ++  G     + 
Sbjct: 171 LYVLSKAFRTLKANRAPPRAVVPLALGG--GFVDAVGGGGWGPVVTATLVGGGQDPRTSI 228

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            +       +A  + L     G           G  +   +  ++   +   P+A  L  
Sbjct: 229 GSVNAAEFFVAVASGLSFTLLG-----------GLTHWTTIAGLVVGGLFAAPIAALLVR 277

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
           +I  + L +   +++ + S V
Sbjct: 278 VIPARVLMVVVGLLIASLSLV 298


>gi|304315611|ref|YP_003850756.1| hypothetical protein Tthe_0083 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777113|gb|ADL67672.1| protein of unknown function DUF81 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 277

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 82/260 (31%), Gaps = 48/260 (18%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           ++P+L+           + +  A+G S+  +  TS  + + + R    N++I        
Sbjct: 30  VIPMLTLLL-------GVNIKYAIGASIISVIATSSGAAVTYVRDKITNIRIGMFLEIAT 82

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD---------------------- 145
               +  + +   +   +L   F +  L     MLK+                       
Sbjct: 83  TTGALTGAYIAGLISSKYLYIIFGLLLLYSAYTMLKKRNEELPVGVVSQPIAKKLKLEGS 142

Query: 146 ------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATAT 198
                 +             +    + G +SG LG+G GIF  + M LF    +  +TAT
Sbjct: 143 YYDKVLKKEIRYNVTGVNKGFGMMYIAGVISGLLGIGSGIFKVMAMDLFMRLPMKVSTAT 202

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  +  + A  +  V +  G     +               +    +L   L TK+   +
Sbjct: 203 SNFMMGVTAAASAGVYLVRGDIDPKI------------AGPVALGVLLGATLGTKIMTNM 250

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               +   F  ++   S   
Sbjct: 251 KSTTIRKIFIPVLAYVSIEM 270



 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           +++G +SGL G+G G+  V         M +   + M V+  TS  ++  T+  S   + 
Sbjct: 167 YIAGVISGLLGIGSGIFKV-------MAMDLFMRLPMKVSTATSNFMMGVTAAASAGVYL 219

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I+ KI       + +   + + +++++  + + K F      + I ML +
Sbjct: 220 VRGDIDPKIAGPVALGVLLGATLGTKIMTNMKSTTIRKIFIPVLAYVSIEMLLK 273


>gi|149173255|ref|ZP_01851886.1| hypothetical protein PM8797T_28734 [Planctomyces maris DSM 8797]
 gi|148848061|gb|EDL62393.1| hypothetical protein PM8797T_28734 [Planctomyces maris DSM 8797]
          Length = 304

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 83/235 (35%), Gaps = 20/235 (8%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VPVL                 ++  S+ ++   +V + + +     I+ + +  +   
Sbjct: 39  ITVPVLIYLV-------GHGTKESITESMAIVGLIAVAAAVPYASSKQIDWRSVLFFGLP 91

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD-----RLYCERKFPDNYVKYI 161
             + T+  + +     ++     F    L   ++ML++            +    +   +
Sbjct: 92  GMLGTLAGAWLGGVAAEALQLVVFGGVLLAAALIMLRKPGNTEANSDSSSQRSPAWKIGL 151

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G+V G ++G +GVGGG      ++  G   +  A  TS  + A  A        +    
Sbjct: 152 EGIVAGIVTGFVGVGGGFLIVPALVILGKLPMRLAIGTSLVIIAFQAAVGFTKYEFYLVA 211

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            +         V+   +LI   + I+ + +   ++  + ++ L   F+  +    
Sbjct: 212 NHMS-------VDWQTILIFTVVGIIGSIIGRHINTRLNQQKLKSVFAGFLLLLG 259


>gi|126663489|ref|ZP_01734486.1| hypothetical protein FBBAL38_09074 [Flavobacteria bacterium BAL38]
 gi|126624437|gb|EAZ95128.1| hypothetical protein FBBAL38_09074 [Flavobacteria bacterium BAL38]
          Length = 122

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 8/127 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV-I 78
           +  I  +++   L+G LSGL GVGGG++MVP+L   F           H A GTSL V +
Sbjct: 3   IQVILSLVLIGVLAGILSGLVGVGGGVIMVPLLVLFFGF-------SQHQAQGTSLAVLV 55

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            P + ++   + + G I+ + +        +     S M  ++D+  L K F    LL+ 
Sbjct: 56  VPVTAIAVYTYHKEGYIDWRYVGIIAVFFVVGGYFGSKMAVNLDQKILKKVFGFILLLIA 115

Query: 139 ILMLKRD 145
             ML   
Sbjct: 116 GKMLLGK 122



 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 12/118 (10%)

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYS 217
             + G++ G LSG +GVGGG+    L+ LF+G S ++A  TS  V  ++   A+ V  Y 
Sbjct: 9   LVLIGVLAGILSGLVGVGGGVIMVPLLVLFFGFSQHQAQGTSLAV-LVVPVTAIAVYTY- 66

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                       G+++   V II    ++     +K++  + +K L   F  I+   +
Sbjct: 67  ---------HKEGYIDWRYVGIIAVFFVVGGYFGSKMAVNLDQKILKKVFGFILLLIA 115


>gi|218768801|ref|YP_002343313.1| hypothetical protein NMA2053 [Neisseria meningitidis Z2491]
 gi|121052809|emb|CAM09156.1| conserved hypothetical integral membrane protein [Neisseria
           meningitidis Z2491]
 gi|319411040|emb|CBY91440.1| conserved hypothetical integral membrane protein [Neisseria
           meningitidis WUE 2594]
          Length = 262

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 92/261 (35%), Gaps = 26/261 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  + + + ++G +  + G GGGL+ +P L     L GI        A+ T+    A  
Sbjct: 6   IILALGLVAMIAGFIDAIAG-GGGLITLPALL----LAGIPPVS----AIATNKLQAAAA 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  + +   R G I+ K             VV +L +S V K  L     +  + + +  
Sbjct: 57  TFSATVSFARKGLIDWKKGLPIAAASFAGGVVGALSVSLVSKDILLAVVPVLLIFVALYF 116

Query: 142 LKRDRLYCERKFPDNYVKYIWGM----VTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
           +   +L   ++       +++G+    + GF  G  G G G  F    ++  G  +  A 
Sbjct: 117 VFSPKLDGSKEGKARMSFFLFGLTVAPLLGFYDGVFGPGVGSFFLIAFIVLLGCKLLNAM 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           + +   +      +L V +  G             +       +   + +   L  + + 
Sbjct: 177 SYTKLANVACNLGSLSVFLLHGS------------IIFPIAATMAVGAFVGANLGARFAV 224

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G K +     +I  + +  
Sbjct: 225 RFGSKLIKPLLIVISISMAVK 245


>gi|153938501|ref|YP_001392143.1| hypothetical protein CLI_2918 [Clostridium botulinum F str.
           Langeland]
 gi|152934397|gb|ABS39895.1| putative membrane protein [Clostridium botulinum F str. Langeland]
 gi|295320148|gb|ADG00526.1| putative membrane protein [Clostridium botulinum F str. 230613]
          Length = 250

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 100/264 (37%), Gaps = 27/264 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L+  A FL+  +  + G GGGL+ +P     + + G+      H+A+GT+     
Sbjct: 1   MFTILLLCFAGFLAAIIDAIAG-GGGLITIPA----YLMAGVPP----HMALGTNKLCAT 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S+ S     + G IN+K+ K       I  V+    +  +D + LN    I  +++ +
Sbjct: 52  CSSLTSCFNFAQSGKINLKLFKILAPFSLIGAVLGVNTVMGIDANCLNIIVLILLVIVAL 111

Query: 140 LMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIY 193
             L    +  +  F      +  +        GF +G  G G G      L+  +     
Sbjct: 112 FSLFSKNVGLKNNFHGLNKKNTLLGIFLSFSLGFYTGFFGPGTGAFMMIGLIGVFKFDFV 171

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+  S  ++ +    +L++  +               +N    + +    I+   L TK
Sbjct: 172 GASGNSKSLTTISNMASLILFAFHRQ------------INYKLAIPVSLAMIIGAKLGTK 219

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           ++   G K +   F+ I    +  
Sbjct: 220 IALNKGSKVIKPVFTAISILIAIK 243


>gi|153869281|ref|ZP_01998929.1| conserved hypothetical protein, membrane [Beggiatoa sp. PS]
 gi|152074183|gb|EDN71065.1| conserved hypothetical protein, membrane [Beggiatoa sp. PS]
          Length = 787

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 98/298 (32%), Gaps = 62/298 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + +   + G LSG  G  G  ++ P +            +   +A+ + +    P +
Sbjct: 111 VLFLFIVGIIGGLLSGFVGASGAFILTPAMMSL--------GVPAIIAVASHMCHKFPPA 162

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--------DKSFLNKAFAIFC 134
           + S ++  ++G +++K+               +L+  +V           +++  F +  
Sbjct: 163 LTSAIKRTKNGLVDIKLAIIMGLSAEAGVFCGALIQIYVKNTYGNLGSNFYVSLIFVVTL 222

Query: 135 LLMGILMLK--------RDRLYCERKFPDNYVKYI------------------------- 161
            ++G   L+           +  + K      + I                         
Sbjct: 223 AIVGGYALREAWKISQAESIVDEKSKLLTKPAQKIQSIRIPGTMMYFPSIGTKISILFII 282

Query: 162 -WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
             G VTG L+  +GV G +    +M   GA+   A+AT   V+ +I     +        
Sbjct: 283 PIGFVTGLLAATIGVAGFVAVPGMMYLLGATGLMASATQLVVAFVIGIGGTIQYALD--- 339

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                    GFV+I   +I+L  S     L    +  +    + +   ++M      F
Sbjct: 340 ---------GFVDIRLAMILLAGSFFGIQLGNISTLYVKDYMIKMVLGVVMILVLLGF 388



 Score = 35.8 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 52/134 (38%), Gaps = 30/134 (22%)

Query: 9   SLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMH 68
           ++M F S    +  I  II   F++G L+   GV  G V VP +       G+       
Sbjct: 265 TMMYFPSIGTKIS-ILFIIPIGFVTGLLAATIGV-AGFVAVPGMMYLLGATGL------- 315

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKI---------------------LKDWIFVL 107
           +A  T L V     +   +++   G +++++                     +KD++  +
Sbjct: 316 MASATQLVVAFVIGIGGTIQYALDGFVDIRLAMILLAGSFFGIQLGNISTLYVKDYMIKM 375

Query: 108 PITTVVTSLMISHV 121
            +  V+  +++  +
Sbjct: 376 VLGVVMILVLLGFL 389


>gi|317048988|ref|YP_004116636.1| hypothetical protein Pat9b_2780 [Pantoea sp. At-9b]
 gi|316950605|gb|ADU70080.1| protein of unknown function DUF81 [Pantoea sp. At-9b]
          Length = 265

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 94/236 (39%), Gaps = 25/236 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++   S L+  +  + G GGGL+ +P L  A         +    A+ T+       S
Sbjct: 11  LVVLFGVSVLAAFIDSIAG-GGGLLTLPSLLAA--------GLSPAQALATNKLQSVGGS 61

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + +   R G IN++  +  I +  I  +  +++I H+    L +   +  + +G+  L
Sbjct: 62  FSASLYFVRRGVINLRAQRLNIAMTFIGAICGAVLIQHIKADILRQILPLLLISIGLWFL 121

Query: 143 KRDRLYCERKFPDNYVK---YIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
              R+  + +    +      + G   GF  G  G G G F  L  +   G ++ KATA 
Sbjct: 122 LMPRIGEQDRAQRLHGLAYALVGGGCVGFYDGFFGPGAGSFYALAFVTLCGFNLAKATAH 181

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           +  ++    F +LL  ++ G             V  G  LI+L  +     L  +L
Sbjct: 182 AKILNFTSNFGSLLFFMFGGK------------VVWGTGLIMLLGAFCGARLGARL 225


>gi|167032883|ref|YP_001668114.1| hypothetical protein PputGB1_1875 [Pseudomonas putida GB-1]
 gi|166859371|gb|ABY97778.1| protein of unknown function DUF81 [Pseudomonas putida GB-1]
          Length = 261

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 95/273 (34%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             +A  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   FTIAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPAT----AVGTDLLYAAITKASG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
              H R   I+ KI             +T   +S +          + +  A+  +L  +
Sbjct: 60  VWVHARQKNIDWKITGLLSLGSVPAAALTLWFLSTLHTDTSALNAIIKQGLAVVLILTAL 119

Query: 140 LMLKRDRLYC-----------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + RL                   N +  + G+V G +     +G G      L +L
Sbjct: 120 AILFKSRLQAFASRHAGDHYHLSDRSLNILTVLTGVVLGVMVTLTSIGAGALGTVALFLL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +          +G G  G+     G ++   +  +L  S+ 
Sbjct: 180 YPFLVTRRLVGTEIAHAVPLTL-------VAGLGHAGM-----GNMDWSLLGYLLLGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + L+  I  + L    + ++    +  A
Sbjct: 228 GIYLGSHLTGRISDRVLRPCLAAMLLLIGYKLA 260



 Score = 40.4 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 28/57 (49%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
            ++   I G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +
Sbjct: 4   GSFGFTIAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKASGV 60



 Score = 37.4 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 42/120 (35%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + G +  L  +G G +    L   +  +           +GT +    P ++
Sbjct: 148 ILTVLTGVVLGVMVTLTSIGAGALGTVALFLLYPFL------VTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G ++  +L   +        + S +   +    L    A   LL+G  +  
Sbjct: 202 VAGLGHAGMGNMDWSLLGYLLLGSLPGIYLGSHLTGRISDRVLRPCLAAMLLLIGYKLAF 261


>gi|317471655|ref|ZP_07930998.1| hypothetical protein HMPREF1011_01346 [Anaerostipes sp. 3_2_56FAA]
 gi|316900880|gb|EFV22851.1| hypothetical protein HMPREF1011_01346 [Anaerostipes sp. 3_2_56FAA]
          Length = 255

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 94/261 (36%), Gaps = 25/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             +  +A   +G  +G  G+    V+ P+L      +G++     ++A+G +L      S
Sbjct: 5   FIICFLAGIGAGLGTGFAGMSAAAVISPMLI---TFLGMNP----YMAVGIALASDVFAS 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +S   + +H  +++K     +  +   T+V S + S V  + +        LL+GI  +
Sbjct: 58  AVSAYTYGKHKNLDIKNGLVMMISVLCFTLVGSYISSLVPSTAMGGFSTFMTLLLGIKFI 117

Query: 143 KRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKA 195
            R  +  +                + G V GF+ G +G GGG+   LL+    G  +  A
Sbjct: 118 VRPVMTTKSSMDLVDAKKRFLQSVLCGSVVGFICGFVGAGGGMMMLLLLTSVLGYELKTA 177

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TS  +    A    L     G   + L            +L  +  + L   +A K +
Sbjct: 178 VGTSVFIMTFTALTGSLSHFAIGGRPDMLS-----------LLFCVLSTFLWARVAAKFA 226

Query: 256 YMIGKKYLTIGFSMIMFTTSF 276
                  L      ++     
Sbjct: 227 NKASAIVLNRATGAVLTVLGL 247


>gi|332526842|ref|ZP_08402941.1| hypothetical protein RBXJA2T_13139 [Rubrivivax benzoatilyticus JA2]
 gi|332111242|gb|EGJ11274.1| hypothetical protein RBXJA2T_13139 [Rubrivivax benzoatilyticus JA2]
          Length = 252

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 96/261 (36%), Gaps = 25/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+  ASF +G +  + G GGGL++VP L  A+               GT+       +
Sbjct: 3   LALVTFASFFAGLVDSIVG-GGGLILVPALFAAY------PQAPAATLFGTNKSASVWGT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +  ++ R   +   +L        +  ++ +  ++ VD +FL +A  +  L + +  +
Sbjct: 56  SFACWQYARRVDLRWAVLGPAAGAALVGGLLGAWAVTLVDPAFLRRALPLILLAVLLYTV 115

Query: 143 KRDRLYCERKFPDN-----YVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKAT 196
            R  L        +           G+V GF  G  G G G F   L +   G     A+
Sbjct: 116 ARKDLGQHHAPIASRSAEIAGASAIGLVIGFYDGFFGPGTGSFFIFLFVRLLGYDFLNAS 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A++  ++      A+ +                G V     L +   ++  + + ++L+ 
Sbjct: 176 ASAKLLNVATNLAAIGLFAAK------------GHVWWHIGLTMAVANVAGSLIGSRLAL 223

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G  ++   F +++      
Sbjct: 224 KHGAGFVRHVFIVVVAALILK 244


>gi|319892762|ref|YP_004149637.1| Putative membrane protein YfcA [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162458|gb|ADV06001.1| Putative membrane protein YfcA [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323464205|gb|ADX76358.1| membrane protein, putative [Staphylococcus pseudintermedius ED99]
          Length = 257

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I +II   FL+  +  + G GGGL+ +P L       G+  +    VA+GT+    A 
Sbjct: 8   TLILIIISLGFLAAFIDAVVG-GGGLISIPALLAI----GMPPA----VALGTNKLASAF 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S+ S +   R G +++ I+     +  IT+++ +++  ++    L     +   ++ + 
Sbjct: 59  GSLTSAIRFIRSGKVDLAIVAKLFPLSFITSILGAIVAVYLPAELLKPIVIVILSMVLVY 118

Query: 141 MLKRDRLYCERKFPDNYVKYIWGM-----VTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            L +      R +    +  +        V GF  G LG G G F   + L  G     A
Sbjct: 119 TLLKKDWGSIRTYTTLPLYKMILFTCLIVVIGFYDGFLGGGTGSFLLFVFLLLGFDFLSA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ IY G
Sbjct: 179 AGNAKVLNFASNLGALLLFIYLG 201


>gi|172041419|ref|YP_001801133.1| hypothetical protein cur_1740 [Corynebacterium urealyticum DSM
           7109]
 gi|171852723|emb|CAQ05699.1| putative membrane protein [Corynebacterium urealyticum DSM 7109]
          Length = 356

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 83/256 (32%), Gaps = 34/256 (13%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L  +A   +  + G  G+  G+    VL     +     S  +H+A          T+
Sbjct: 4   ILLFAIAGLAAQLVDGALGMAFGVTATTVLL-ITGIGPAAASAAVHIAE-------VGTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H + G ++   +        I   + + ++S +  +        F LL+G+ +L
Sbjct: 56  AASGTAHWKLGNVHWPTVLSLGVPGAIGAFLGATVLSKISTAAAEPVVTSFLLLLGLWLL 115

Query: 143 K-----------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LL 184
                             + R    R         + G+ +GFL  + G G G  T   L
Sbjct: 116 FRSIFLSSARQASKTKEEKQRDTARRAPRTRIGLGVLGITSGFLDASGGGGWGPMTTSTL 175

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +        K   T +    L++  A    I+ G G   L  W         V  +L   
Sbjct: 176 LTVAKTQPRKVIGTVSASEFLVSVAASAGFIF-GLGPQFLSLWQ-------PVAGLLVGG 227

Query: 245 ILITPLATKLSYMIGK 260
           ++  P+A      I  
Sbjct: 228 VIAAPIAAWAVSRINP 243


>gi|296269195|ref|YP_003651827.1| hypothetical protein Tbis_1213 [Thermobispora bispora DSM 43833]
 gi|296091982|gb|ADG87934.1| protein of unknown function DUF81 [Thermobispora bispora DSM 43833]
          Length = 296

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 10/197 (5%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L + A+   G   GLFG GG ++ VP+L            +    A+ TSL V+A T
Sbjct: 1   MIALALAAAVAVGVTLGLFGGGGSILTVPLLVYL-------AGVPPKAAIATSLFVVAVT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S +S + H R G I       +            L+  H+ +++L   FA+  +   + M
Sbjct: 54  STVSAIGHARAGRIRWGTGLVFGAAGMAGAYAGGLIGPHLPEAWLLAGFALMMVATAVAM 113

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI---FTNLLMLFYGASIYKATAT 198
           ++  R    R      + ++             VG G        L+L  G  +  A  T
Sbjct: 114 IRGRRAPAARSARKRRIGHVIAEGVVVGVVTGLVGAGGGFLVVPALVLLGGLPMDVAVGT 173

Query: 199 SAGVSALIAFPALLVRI 215
           S  V A+ ++  L   +
Sbjct: 174 SLIVIAMKSYAGLAGYL 190



 Score = 38.1 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            ++VP L            + M VA+GTSL VIA  S      +     I+  +      
Sbjct: 153 FLVVPALVLL-------GGLPMDVAVGTSLIVIAMKSYAGLAGYLHGVEIDWALALAVTA 205

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
              +  ++   +   V    L KAF  F L+MG ++L +     
Sbjct: 206 AAVLGGLLGGRLAGRVRADRLRKAFGWFVLVMGAVVLAQQAPSA 249


>gi|229165879|ref|ZP_04293645.1| integral membrane protein [Bacillus cereus AH621]
 gi|228617584|gb|EEK74643.1| integral membrane protein [Bacillus cereus AH621]
          Length = 263

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 76/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++I   FL+  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 16  SVLIILIAFGFLAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 66

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
               S +   R G +++K       +  I +++ +  +  ++   L     I    + I 
Sbjct: 67  GCATSNIVFYRSGNLDLKSAFKLFPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 126

Query: 141 MLKRDRL---YCERKFPDNY--VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +  +   +  + GF  G LG G G F    +LF G    KA
Sbjct: 127 TIFKKDWGSVSTHKKLSGRHFIIFTFFIFIIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 186

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 187 AGNAKLLNLGSNVGALLIFMYVG 209


>gi|154500403|ref|ZP_02038441.1| hypothetical protein BACCAP_04070 [Bacteroides capillosus ATCC
           29799]
 gi|150270908|gb|EDM98191.1| hypothetical protein BACCAP_04070 [Bacteroides capillosus ATCC
           29799]
          Length = 130

 Score = 61.6 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 8/123 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + A  L+G LSG FG+GGG ++   L       G+  +    +A G +L    PT+  + 
Sbjct: 8   VAAGALTGILSG-FGIGGGTLL---LIYMTSFAGVPQN----LAQGVNLLYFLPTAATAL 59

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             H ++G ++       I    + T +++   + +D   L + F ++ L +G+  L R +
Sbjct: 60  PAHIKNGYVDRTAAWPAILAGLLGTALSAWAATGLDVHLLRRCFGVYLLYVGVTELFRKK 119

Query: 147 LYC 149
              
Sbjct: 120 PNP 122



 Score = 43.1 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 14/120 (11%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRI 215
           ++    G +TG LSG  G+GGG    + M  + G     A   +       A  AL   I
Sbjct: 5   FLPVAAGALTGILSG-FGIGGGTLLLIYMTSFAGVPQNLAQGVNLLYFLPTAATALPAHI 63

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            +            G+V+  A    +   +L T L+   +  +    L   F + +    
Sbjct: 64  KN------------GYVDRTAAWPAILAGLLGTALSAWAATGLDVHLLRRCFGVYLLYVG 111


>gi|296137577|ref|YP_003644819.1| protein of unknown function DUF81 [Thiomonas intermedia K12]
 gi|295797699|gb|ADG32489.1| protein of unknown function DUF81 [Thiomonas intermedia K12]
          Length = 251

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 54/263 (20%), Positives = 95/263 (36%), Gaps = 25/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+ +A+  +G +  + G GGGLV+VP L  AF               GT+ G     +
Sbjct: 3   LILLGIAALFAGFVDAIVG-GGGLVLVPALFAAFPN------AAPATLFGTNKGGAIWGT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   + R        +        +  +  +  I+ V  +   +A     L + +  L
Sbjct: 56  SASMWSYVRRVQPPWSTVAPATLAAFVGALGGAWFITQVKSTDFRQALPFILLAVLLYTL 115

Query: 143 KRDRL--YCERKFPDNYVKYIW---GMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
           KR  L  +          + +    G++ GF  G  G G G     L +  +G     A+
Sbjct: 116 KRKDLGHHHAPHLSGGAERALAVGGGLLIGFYDGFFGPGTGNFLIFLFVRGFGFDFLHAS 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A++  V+      ALLV              S G V      +I   +I  + L T+L+ 
Sbjct: 176 ASAKVVNVACNLAALLVFA------------SKGHVMWQYAALIAVCNIAGSLLGTRLAL 223

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F +++       A
Sbjct: 224 RRGTHFVRGVFLLVVAALILKTA 246


>gi|254361076|ref|ZP_04977221.1| possible membrane protein [Mannheimia haemolytica PHL213]
 gi|261493597|ref|ZP_05990117.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495435|ref|ZP_05991883.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|153092562|gb|EDN73617.1| possible membrane protein [Mannheimia haemolytica PHL213]
 gi|261308940|gb|EEY10195.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310779|gb|EEY11962.1| putative membrane protein [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 254

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 84/203 (41%), Gaps = 13/203 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + ++   + L+G +  + G GGGL+ +P L        +   +   +A+GT+     
Sbjct: 5   IDVLAILFAVATLAGFIDAIAG-GGGLLTIPAL--------MAAGLPPAMALGTNKLQAC 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+ S +   R   +N+K +   I    + +   ++ +  ++  FL        L++GI
Sbjct: 56  GGSLSSSLYFIRKKAVNLKQIWLLILCTFLGSAAGTIFVQMINVDFLKTLLPFLILIIGI 115

Query: 140 LMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
             L   ++  E   ++       +   +  GF  G  G   G F  L  +L  G ++ KA
Sbjct: 116 YFLVSPKIGDEDRKQRISFTLFAFTAAVALGFYDGMFGPATGSFMTLAFILLLGFNLSKA 175

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
            A +  ++    F +L+     G
Sbjct: 176 VAHAKVINFTSNFASLIFFTLGG 198


>gi|296391871|ref|ZP_06881346.1| hypothetical protein PaerPAb_27123 [Pseudomonas aeruginosa PAb1]
 gi|313110061|ref|ZP_07795964.1| putative membrane protein [Pseudomonas aeruginosa 39016]
 gi|310882466|gb|EFQ41060.1| putative membrane protein [Pseudomonas aeruginosa 39016]
          Length = 324

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 84/252 (33%), Gaps = 21/252 (8%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +   F +  + G  G+  G+     L  A        S  +H+A          T+  S 
Sbjct: 86  VAVGFFAQVIDGALGMAYGITATTFLLSAGATP-AAASASVHIAE-------VFTTGFSG 137

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD- 145
           + H + G +N  +    +    I  V+ +++I+  D   L    + + LLMG+ +L +  
Sbjct: 138 ISHVKLGNVNKSLFLRLLLPGMIGAVLGAVLITRFDGHQLKPFISAYLLLMGLYILSKAY 197

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
           R   +R+ P +  K       GF+  A G G G      ++  G+       +       
Sbjct: 198 RHVIKRRAPRHVAKLAL--FGGFVDAAGGGGWGPVVTSSLIGSGSDPRTTIGSVNFAEFF 255

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           +   +    I      +              V  ++   +   P A  L   +  + L +
Sbjct: 256 LTIASATSFILLAGQPDT----------WKMVAGLVFGGLFAAPFAALLCKKLSPRTLLV 305

Query: 266 GFSMIMFTTSFV 277
               ++   S  
Sbjct: 306 IVGTLITLISAY 317


>gi|226360047|ref|YP_002777825.1| hypothetical protein ROP_06330 [Rhodococcus opacus B4]
 gi|226238532|dbj|BAH48880.1| hypothetical membrane protein [Rhodococcus opacus B4]
          Length = 321

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 83/248 (33%), Gaps = 23/248 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +    +  + G  G+  G+      +      G+  +     A          T+
Sbjct: 4   LLIFTLVGVGAQLVDGALGMAFGVTA----TTLLVFSGVGPAH----ASAAVHFAEVGTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H R   I+  ++        I   + + ++S +  +      +   L +G+ +L
Sbjct: 56  LASGASHWRFRNIDWPLVLRLGVPGAIGAFLGATVLSQLSTAAAVPVTSTILLAIGVYVL 115

Query: 143 KRDRLYC-----ERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKA 195
            R  +        R  P         G+  GF+  + G G G  T   +L  G  +    
Sbjct: 116 LRFSIRPPAVNDARTSPHTAKFLSPLGLFGGFIDASGGGGWGPITTSTLLSRGKTAPRTV 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             + +    L++  A +  I+ G G +        F NI  +  +    I+  P+A  L 
Sbjct: 176 IGSVSASEFLVSAAASIGFIF-GLGSDF-------FDNIPIIAGLALGGIIAAPVAAWLV 227

Query: 256 YMIGKKYL 263
             +    L
Sbjct: 228 SRVPATLL 235


>gi|148239255|ref|YP_001224642.1| hypothetical protein SynWH7803_0919 [Synechococcus sp. WH 7803]
 gi|147847794|emb|CAK23345.1| Uncharacterized conserved membrane protein [Synechococcus sp. WH
           7803]
          Length = 245

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 7/114 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++V     G L+G+ GVGGG  +VP L    +L        M +A GTSL VI  +S+M+
Sbjct: 112 LLVQGLGVGLLTGIAGVGGGFAIVPALVLLARL-------PMTLASGTSLLVICASSLMA 164

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            + H      ++ +L   +    I  ++    +S V +  L + FA   L+  I
Sbjct: 165 LVRHGHWPAASLPLLLPLLLGGGIGILLGQRWVSRVSERRLRQGFAALLLVSAI 218



 Score = 43.5 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 47/136 (34%), Gaps = 23/136 (16%)

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSAL 205
               R+        + G+  G L+G  GVGGG      ++      +  A+ TS     +
Sbjct: 100 PEPARQREGRIQLLVQGLGVGLLTGIAGVGGGFAIVPALVLLARLPMTLASGTSL---LV 156

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV-----LIILPISILITPLATKLSYMIGK 260
           I   +L+  +  G              +  A      L +L    +   L  +    + +
Sbjct: 157 ICASSLMALVRHG--------------HWPAASLPLLLPLLLGGGIGILLGQRWVSRVSE 202

Query: 261 KYLTIGFSMIMFTTSF 276
           + L  GF+ ++  ++ 
Sbjct: 203 RRLRQGFAALLLVSAI 218


>gi|67078356|ref|YP_245974.1| permease [Bacillus cereus E33L]
 gi|66970662|gb|AAY60636.1| possible permeases [Bacillus cereus E33L]
          Length = 257

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 98/270 (36%), Gaps = 36/270 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             II+   + G L G+ G+GG  ++ P L            I   +A+GT L   + T +
Sbjct: 3   ISIIIMGMVVGVLVGMTGIGGAALLTPFLLTV--------GITPSIAVGTDLLYNSITKM 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIFCLLM 137
               +H +  TIN K+++        + ++    I  +       +  L        ++ 
Sbjct: 55  FGITQHWKQKTINFKLVRYLALGSIPSAIIAITTIHFLPILHQNREELLKYIIGYVLIVA 114

Query: 138 GILMLKRDRLYCERKFP---------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF- 187
            I +  +   Y +                V    G + GF+ G   VG G    ++M++ 
Sbjct: 115 AISIFIKILFYNQSVPNYFQKQSLEQKKNVTIFIGAILGFVVGLTSVGSGSLFAIVMIYL 174

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           Y     +   T    + ++   A ++ +             LG V+    + +L  SI  
Sbjct: 175 YQMKPSELVGTDITHAFILVTVASILNM------------KLGNVDYILTMNLLIGSIPG 222

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             + +KLS  I  K L    ++I+F +   
Sbjct: 223 VIIGSKLSSKIPVKPLQFLLALIIFVSGLK 252



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 54/139 (38%), Gaps = 7/139 (5%)

Query: 4   LLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD 63
           L YN S+  +  K  +     + I    + G + GL  VG G +   V+   +Q+   + 
Sbjct: 123 LFYNQSVPNYFQKQSLEQKKNVTIFIGAILGFVVGLTSVGSGSLFAIVMIYLYQMKPSEL 182

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
                  +GT +        ++ + + + G ++  +  + +       ++ S + S +  
Sbjct: 183 -------VGTDITHAFILVTVASILNMKLGNVDYILTMNLLIGSIPGVIIGSKLSSKIPV 235

Query: 124 SFLNKAFAIFCLLMGILML 142
             L    A+   + G+ ++
Sbjct: 236 KPLQFLLALIIFVSGLKLV 254


>gi|240116294|ref|ZP_04730356.1| hypothetical protein NgonPID1_08677 [Neisseria gonorrhoeae PID18]
 gi|268601962|ref|ZP_06136129.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268586093|gb|EEZ50769.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
          Length = 262

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 93/261 (35%), Gaps = 26/261 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  + + + ++G +  + G GGGL+ +P L     L GI        A+ T+    A  
Sbjct: 6   IILALGLVAMIAGFIDAIAG-GGGLITLPALL----LAGIPPVS----AIATNKLQAAAA 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  + +   R G I+ K             VV +L +S V K  L     +  + + +  
Sbjct: 57  TFSATVSFARKGLIDWKKGLPIAAASFAGGVVGALSVSLVSKDILLAVVPVLLIFVALYF 116

Query: 142 LKRDRLYCERKFPDNYVKYIWG----MVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
           +   +L   ++       +++G    ++ GF  G  G G G  F    ++  G  +  A 
Sbjct: 117 VFSPKLDGSKEGKARMSFFLFGLTVALLLGFYDGVFGPGVGSFFLIAFIVLLGCKLLNAM 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           + +   +      +L V +  G             +    V  +   + +   L  + + 
Sbjct: 177 SYTKLANVACNLGSLSVFLLHGS------------IIFPIVATMAVGAFVGANLGARFAV 224

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G K +     +I  + +  
Sbjct: 225 RFGSKLIKPLLIVISISMAVK 245


>gi|229188153|ref|ZP_04315234.1| Permease [Bacillus cereus BGSC 6E1]
 gi|228595322|gb|EEK53061.1| Permease [Bacillus cereus BGSC 6E1]
          Length = 279

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 99/263 (37%), Gaps = 36/263 (13%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F+ G L GL G+GG  ++ P L       GI  S    VA+GT L     T +    +H 
Sbjct: 32  FIVGGLVGLTGIGGAALLTPFLLTL----GISPS----VAVGTDLVYNTITKMFGISQHW 83

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIFCLLMGILMLKR 144
           +  TIN +++K        + V+  + I  +       +  +        ++    +  +
Sbjct: 84  KQKTINFRLVKYLAVGNIPSAVIAVVTIHFLPIFHYNREEIIKYILGYILIIASFSIFIK 143

Query: 145 ---------DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYK 194
                    +    +       +  I G + GF+ G   VG G    ++M++ Y     +
Sbjct: 144 VFFYNESIQNHFQKQTMPQKKSLTIIIGAILGFIVGLTSVGSGSLFAIVMIYLYQLKPSE 203

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
              T    + L+   A ++ +            +LG V+   ++ +L  SI    L +K 
Sbjct: 204 LVGTDITHAFLLVTVASILNM------------NLGNVDYLLLIHLLIGSIPGVILGSKF 251

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
           S  I  + L +  ++I+  +   
Sbjct: 252 STKIPVRPLQVVLAIIIGVSGLK 274



 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 51/139 (36%), Gaps = 7/139 (5%)

Query: 4   LLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD 63
             YN S+     K  +     L I+   + G + GL  VG G +   V+   +QL   + 
Sbjct: 145 FFYNESIQNHFQKQTMPQKKSLTIIIGAILGFIVGLTSVGSGSLFAIVMIYLYQLKPSEL 204

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
                  +GT +        ++ + +   G ++  +L   +       ++ S   + +  
Sbjct: 205 -------VGTDITHAFLLVTVASILNMNLGNVDYLLLIHLLIGSIPGVILGSKFSTKIPV 257

Query: 124 SFLNKAFAIFCLLMGILML 142
             L    AI   + G+ ++
Sbjct: 258 RPLQVVLAIIIGVSGLKLV 276


>gi|258424129|ref|ZP_05687011.1| conserved hypothetical protein [Staphylococcus aureus A9635]
 gi|257845750|gb|EEV69782.1| conserved hypothetical protein [Staphylococcus aureus A9635]
          Length = 256

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 81/204 (39%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +II+  F++  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   LTMIIIIILFGFIAAFIDSVVG-GGGLISTPALLAI--------GLPPSVALGTNKLASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S+ S ++  R G +++ ++      + + +   + + + V    L     I    + I
Sbjct: 56  FSSLTSAIKFIRSGKVDLYVVAKLFGFVFLASACGAYIATMVPSQILKPLIIIALSSVFI 115

Query: 140 LMLKRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             L +      R      F    +     ++ GF  G +G G G F   ++L +G     
Sbjct: 116 FTLLKKDWGNTRTFTQFTFKKALLFAALFILIGFYDGFVGGGTGSFMLFVLLIFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A   +  ++      AL++ +  G
Sbjct: 176 AAGNAKVLNFASNIGALVLFMVLG 199


>gi|256422325|ref|YP_003122978.1| hypothetical protein Cpin_3310 [Chitinophaga pinensis DSM 2588]
 gi|256037233|gb|ACU60777.1| protein of unknown function DUF81 [Chitinophaga pinensis DSM 2588]
          Length = 278

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 104/287 (36%), Gaps = 45/287 (15%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++ +  +++V +F +G L  L G+GGG+V++P+L+  F        + +  A+G SL  
Sbjct: 2   SILVFTLILLVGAFTAGMLGSLTGLGGGVVLIPLLTLVFH-------VDIRYAVGASLVA 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
               S  +   + + G  N++I            ++ +++  +     +   F    L  
Sbjct: 55  SIANSSGAAAAYIKEGITNVRIGMFLEIATTTGAIIGAVLAVYTPTHLVAILFGFVLLFS 114

Query: 138 GILMLKRDR-------------------------LYCERKFPDNYVKYIWGMVTGFLSGA 172
             + L++                           +    K       Y    V G +SG 
Sbjct: 115 AAMTLRKKNEHGDNESNSKLARIMRLNNSYPVNGVEVPYKVRGVAGGYALMTVAGVVSGL 174

Query: 173 LGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF 231
           LG+G G    L M          +T TS  +  + A  + ++ +  G+   G        
Sbjct: 175 LGIGSGALKVLAMDGVMRIPFKVSTTTSNFMIGVTAAASAVIYLQRGYIDPG-------- 226

Query: 232 VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           + +  VL +L  +       ++L   +  + L + F +++   +   
Sbjct: 227 IALPVVLGVLAGAFG----GSRLLMKMNTRKLRLLFCVVISALALEM 269



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G +SGL G+G G + V  +    +       I   V+  TS  +I  T+  S + + +
Sbjct: 167 VAGVVSGLLGIGSGALKVLAMDGVMR-------IPFKVSTTTSNFMIGVTAAASAVIYLQ 219

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G I+  I    +  +       S ++  ++   L   F +    + + M+  
Sbjct: 220 RGYIDPGIALPVVLGVLAGAFGGSRLLMKMNTRKLRLLFCVVISALALEMIYN 272


>gi|218886804|ref|YP_002436125.1| hypothetical protein DvMF_1711 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757758|gb|ACL08657.1| protein of unknown function DUF81 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 354

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 91/280 (32%), Gaps = 44/280 (15%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I    ++G L G+ G    L  VP+ +           + + VA+GT+    A   +
Sbjct: 84  VLGIGVGMVAGFLGGMVGAFISLFSVPLYTLWL-------GLPVKVALGTNSLASAVIGL 136

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML- 142
           M+ M H    T NMK+    +    +     + +   +    L   F++        ML 
Sbjct: 137 MAAMVHLSKKTPNMKVAFPMMATGFLGAGAGAYLSLGMTPEQLKMYFSVLVFGAAFWMLW 196

Query: 143 KRDRLYCER----------------------KFPDNYVKYIWG-MVTGFLSGALGVGGGI 179
           +  R    +                       +  N +   +G      L+G +GVGGG 
Sbjct: 197 RGIRPAPAKSGGFVATEKQGLLYAGGEWNGVPYRTNILYPAFGNFFIAALTGIIGVGGGF 256

Query: 180 FTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
               ++   +G  +  A  T   V       A +   +   G+     + L        +
Sbjct: 257 LFTPMLHAAFGLPMMVAVGTGNFVKV-----ANIGSQFIVRGVADTVIYQL-------AV 304

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             +           +L  ++  +YL + F +++      +
Sbjct: 305 FAMLGGYCGANFGRRLGCVVDTRYLRLLFGILLIFVGLQY 344



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 7/118 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I      +F    L+G+ GVGGG +  P+L  AF        + M VA+GT   V     
Sbjct: 233 ILYPAFGNFFIAALTGIIGVGGGFLFTPMLHAAF-------GLPMMVAVGTGNFVKVANI 285

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
              F+      T+  ++    +            +   VD  +L   F I  + +G+ 
Sbjct: 286 GSQFIVRGVADTVIYQLAVFAMLGGYCGANFGRRLGCVVDTRYLRLLFGILLIFVGLQ 343


>gi|258512058|ref|YP_003185492.1| hypothetical protein Aaci_2093 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257478784|gb|ACV59103.1| protein of unknown function DUF81 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 256

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 92/251 (36%), Gaps = 26/251 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  ++ V  +++  +    G GGGL+ +P L            +    A+GT+      +
Sbjct: 8   HAVILAVGGYVAAFIDSTVG-GGGLISLPALLFV--------GLPPAAALGTNKFAGTMS 58

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ SF  +   G + +K++     +  + + + + ++  +  SFL     +  +++    
Sbjct: 59  AITSFSSYLLSGKVRLKLVGPLFPLGVMASALGAYIVHQLPSSFLRPFVLVMLVIVAAYT 118

Query: 142 LKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           L +  L               +  +  +  GF  G  G G G F  +  L  G     A+
Sbjct: 119 LWKKDLGLVESIRPLTPKTFALTALLAIGLGFYDGFFGPGTGSFLVMGFLLLGFDFLAAS 178

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++      AL   I            ++G V   A LI+    +L     ++ + 
Sbjct: 179 GNARTLNLASNVGALATFI------------AVGAVRYDAGLILGLSMVLGALTGSRFAI 226

Query: 257 MIGKKYLTIGF 267
             G +Y+   F
Sbjct: 227 RKGARYVRPIF 237


>gi|224367363|ref|YP_002601526.1| hypothetical protein HRM2_02400 [Desulfobacterium autotrophicum
           HRM2]
 gi|223690079|gb|ACN13362.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 258

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 98/261 (37%), Gaps = 25/261 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
               L+    F +G +  + G GGGL+ +P+L        +   +   +A+GT+    + 
Sbjct: 9   QLFALLFGTGFFAGFVDSIAG-GGGLISLPIL--------MSTGMPPQMALGTNKLQGSF 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            + ++   +   G +  K     IF   I  +  +  I  +D  FL     +  + + + 
Sbjct: 60  GTFIAACNYTSKGEVEPKKTLVGIFFTLIGALAGAWAIQRLDPWFLTYIIPLLLVGVFVY 119

Query: 141 MLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
            L      ++    +   N     +G+  GF  G  G G G F     M+  G S+ +A 
Sbjct: 120 TLFSRDLGKVTTRARLSLNLFFVFFGLGLGFYDGFFGPGTGNFWMTGFMVVMGFSMTRAA 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++ +    AL + +           +S+G       + +    IL   L + L+ 
Sbjct: 180 GFTRIMNLVSNVVALTMFVVG-----QNVIYSVG-------ITMALGQILGARLGSGLAI 227

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G  ++   F +++F T   
Sbjct: 228 KKGAGFIRPVFLVVVFFTIVR 248


>gi|282896100|ref|ZP_06304126.1| Protein of unknown function DUF81 [Raphidiopsis brookii D9]
 gi|281199018|gb|EFA73893.1| Protein of unknown function DUF81 [Raphidiopsis brookii D9]
          Length = 268

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 76/218 (34%), Gaps = 36/218 (16%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + +  A+G SL  +  TS+ S   + + G  N+++            ++ +LM + +  
Sbjct: 31  GVDIRYAIGASLVSVIATSLGSASTYIKKGFTNIRLGMFLEVATTTGAIIGALMATFISV 90

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI---------------------W 162
            FL    A   +    L       Y E   PD   +Y+                      
Sbjct: 91  KFLTIILAFVLIYSAYLSQSPKSEYQEVATPDTLAEYLELNGTYPISDGVIPYYVNCLPA 150

Query: 163 GMVT----GFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           G       G LSG LG+G G F  L M          +T TS  +  + A  +  V +  
Sbjct: 151 GFSIMLLAGILSGLLGIGSGAFKVLAMDQVMRLPFKVSTTTSNFMIGVTAATSAGVYLSR 210

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITP--LATK 253
           G+   GL        ++  +L +LP + L     +  K
Sbjct: 211 GYIDPGL--------SMPVMLGVLPGAFLGARILIGAK 240



 Score = 43.1 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 53/133 (39%), Gaps = 11/133 (8%)

Query: 16  KDCVVDYICLIIVASF----LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
            D V+ Y    + A F    L+G LSGL G+G G   V  + +  +L          V+ 
Sbjct: 137 SDGVIPYYVNCLPAGFSIMLLAGILSGLLGIGSGAFKVLAMDQVMRL-------PFKVST 189

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
            TS  +I  T+  S   +   G I+  +    +  +     + + ++       +   F+
Sbjct: 190 TTSNFMIGVTAATSAGVYLSRGYIDPGLSMPVMLGVLPGAFLGARILIGAKTQTIRIIFS 249

Query: 132 IFCLLMGILMLKR 144
           I  ++M + M+  
Sbjct: 250 IILIVMALKMVYN 262


>gi|196044256|ref|ZP_03111492.1| putative membrane protein [Bacillus cereus 03BB108]
 gi|196024895|gb|EDX63566.1| putative membrane protein [Bacillus cereus 03BB108]
 gi|324324980|gb|ADY20240.1| hypothetical protein YBT020_04970 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 255

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNVGALLMFMYVG 201



 Score = 35.8 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|306835480|ref|ZP_07468497.1| conserved membrane protein YtnM [Corynebacterium accolens ATCC
           49726]
 gi|304568646|gb|EFM44194.1| conserved membrane protein YtnM [Corynebacterium accolens ATCC
           49726]
          Length = 339

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 87/247 (35%), Gaps = 22/247 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + LI VA   +  + G  G+G G+      +    L G+  +    V     LG    T+
Sbjct: 4   LILIAVAGAAAQLVDGGIGMGFGVTS----TTILLLAGLGPAQASAVVHTAELG----TT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            MS + H R G ++ K +        I   + + ++S++         A+  + +G  ++
Sbjct: 56  AMSGLSHARFGNVDWKTVFRLGVPGAIAAFIGATVLSNISTDAAAPITALILVAIGSNLI 115

Query: 143 -----KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS-IYKAT 196
                 R   + +++          G V GF+    G G G  +   ++  G     +  
Sbjct: 116 WRFSRPRRAKFVQKRSHSTPFLIGLGSVGGFVDSTGGGGWGPVSTSTLMAIGREQPRRIV 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T      L+   A L  +   W             N+ AVL +L    +  P+A  +  
Sbjct: 176 GTVNTAEFLVTLGATLGFVVGLWQDIVA--------NLSAVLALLIGGSIAAPIAAWVIS 227

Query: 257 MIGKKYL 263
            I    L
Sbjct: 228 RIEPVVL 234


>gi|153870060|ref|ZP_01999538.1| universal stress protein [Beggiatoa sp. PS]
 gi|152073477|gb|EDN70465.1| universal stress protein [Beggiatoa sp. PS]
          Length = 750

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 99/298 (33%), Gaps = 61/298 (20%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D I  +++  F+ G +SG  G GG  V+ P +        +   +   +A+ +++    
Sbjct: 111 LDNILFLLIVGFIGGLVSGFIGSGGAFVLTPAM--------MSMGVPAVMAVASNMCHKF 162

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------------- 125
           P +++  M+  ++G +++K+            +  + + +H+ + F              
Sbjct: 163 PKALVGSMKRAKYGQVDVKLGIVMGISAEAGVLYGASIQTHIKEIFGDVGSNLYVSFVFV 222

Query: 126 ----------LNKAFAIFCLLMG----ILMLKRDRLYCERKFPDN-------------YV 158
                     L  A+ I+           + K  +       P                 
Sbjct: 223 VVLAVVGGYVLRDAYKIYKDGSAEGQEHKITKLAKWVQSVHIPGTMMYFPSIGTSISVLF 282

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
               G  TG L+  + VGG +    +M   G     A+AT   V+ ++     +     G
Sbjct: 283 TIPLGFATGMLAATIAVGGFVGVPAMMYVLGVPGLMASATELVVAFVMGMGGTIKFALDG 342

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                        V+I   +IIL  S+    L    +  +    + +   +IM    F
Sbjct: 343 L------------VDIRLAMIILAGSLFGVQLGAIGTTYVKDFMIKVVMGVIMILVLF 388


>gi|313202568|ref|YP_004041225.1| hypothetical protein Palpr_0078 [Paludibacter propionicigenes WB4]
 gi|312441884|gb|ADQ78240.1| protein of unknown function DUF81 [Paludibacter propionicigenes
           WB4]
          Length = 265

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 50/272 (18%), Positives = 108/272 (39%), Gaps = 25/272 (9%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           L  D  +  I  ++V SF++G +  + G GGGL+ +P L  +        +  +    GT
Sbjct: 6   LFSDYSLITIVSLVVLSFVAGFIDAVVG-GGGLIQIPALLISL------PNQPLATVFGT 58

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       + ++  ++ R    + ++L        + + V +  +S ++   L     + 
Sbjct: 59  NKIASLSGTSVAAYQYSRRVRFDFRLLLVIAAFSFVASYVGAKTVSLINVDTLKPIVLVI 118

Query: 134 CLLMGILMLKRDRLY--CERKFPDNYVKY---IWGMVTGFLSGALGVGGGIFTNL-LMLF 187
            +L+ +    +  L     R            + GMV GF  G  G G G F  L  ++ 
Sbjct: 119 LILIAVYTFMKKDLGSLPSRTLSTRRQLVFGSLIGMVVGFYDGFFGPGTGSFFVLGFVVI 178

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
            G     A+A +  ++ +    AL+V +  G  L G+             L++   ++L 
Sbjct: 179 LGFEFLTASAYAKIINCITNISALIVFVRQGNFLPGI------------ALLMAVFNVLG 226

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           +   ++++   G  ++ + F +I+      +A
Sbjct: 227 SVTGSRMALKKGNGFIRVVFLVIVSIMILRYA 258


>gi|49477668|ref|YP_036512.1| hypothetical protein BT9727_2185 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49329224|gb|AAT59870.1| conserved hypothetical protein, possible membrane protein [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 257

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 97/261 (37%), Gaps = 36/261 (13%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
            G L G+ G+GG  ++ P L       GI  S    +A+GT L   + T +    +H + 
Sbjct: 12  VGVLVGMTGIGGAALLTPFLLTV----GIPPS----IAVGTDLLYNSITKMFGITQHWKQ 63

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIFCLLMGILMLKRDR 146
            TIN K+++        + ++    I  +       +  L        ++  I +  +  
Sbjct: 64  KTINFKLVRYLALGSIPSAIIAITTIHFLPILHQDREEVLKYIIGYVLIVAAISIFIKII 123

Query: 147 LYCERKFP---------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKAT 196
            Y +                V    G + GF+ G   VG G    ++M++ Y     +  
Sbjct: 124 FYNQSVPNYFQKQSLEQKKNVTIFIGAILGFVVGLTSVGSGSLFAIVMIYLYQMKPSELV 183

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T    + ++   A ++ +             LG V+    + +L  SI    + +KLS 
Sbjct: 184 GTDITHAFILVTVASILNM------------QLGNVDYILTINLLIGSIPGVIIGSKLSS 231

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            I  K L +  ++I+F +   
Sbjct: 232 KIPVKPLQLLLALIIFVSGLK 252



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 54/139 (38%), Gaps = 7/139 (5%)

Query: 4   LLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD 63
           + YN S+  +  K  +     + I    + G + GL  VG G +   V+   +Q+   + 
Sbjct: 123 IFYNQSVPNYFQKQSLEQKKNVTIFIGAILGFVVGLTSVGSGSLFAIVMIYLYQMKPSEL 182

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
                  +GT +        ++ + + + G ++  +  + +       ++ S + S +  
Sbjct: 183 -------VGTDITHAFILVTVASILNMQLGNVDYILTINLLIGSIPGVIIGSKLSSKIPV 235

Query: 124 SFLNKAFAIFCLLMGILML 142
             L    A+   + G+ ++
Sbjct: 236 KPLQLLLALIIFVSGLKLV 254


>gi|313205796|ref|YP_004044973.1| hypothetical protein Riean_0296 [Riemerella anatipestifer DSM
           15868]
 gi|312445112|gb|ADQ81467.1| protein of unknown function DUF81 [Riemerella anatipestifer DSM
           15868]
          Length = 348

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 3/129 (2%)

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           SL +   TS  S +   +   I+ KI   ++        + +  I +++  +L    A+F
Sbjct: 46  SLTIGTFTSSASRIVVFKK-HISWKIFFWFVPFSIPAVFLGAFFIKYINPVYLQLVVALF 104

Query: 134 CLLMGILMLKRDRLYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
            +     + K  +   + + P   Y+  I G + GF+SG  G  G +  N   L YG S 
Sbjct: 105 LIANLPQLFKSGKQQKQDEKPYPKYILGIIGFLAGFVSGITGAIG-LLFNRFYLKYGLSK 163

Query: 193 YKATATSAG 201
            +  AT A 
Sbjct: 164 EEIVATRAA 172


>gi|170720907|ref|YP_001748595.1| hypothetical protein PputW619_1722 [Pseudomonas putida W619]
 gi|169758910|gb|ACA72226.1| protein of unknown function DUF81 [Pseudomonas putida W619]
          Length = 261

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 95/273 (34%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             +A  + G + G+ GVGGG +M P+L       GI  +     A+GT L   A T    
Sbjct: 8   FTIAGLVVGFIVGMTGVGGGSLMTPILLW----FGISPAT----AVGTDLLYAAITKASG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
              H R+  I+ +I             +T   +S +          + +  A+  +L  +
Sbjct: 60  VWVHSRNKNIDWRITGLLSLGSVPAAALTLWFLSTLHTDTSALNGIIKQGLAVVLILTAL 119

Query: 140 LMLKRDRLYC-----------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + RL                   N +  + G+V G +     +G G      L +L
Sbjct: 120 AILFKSRLQAFANRHAGDHYQLSDRSLNILTVLTGVVLGVMVTLTSIGAGALGTVALFLL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +          +G G  G+     G ++   +  +L  S+ 
Sbjct: 180 YPFLVTRRLVGTEIAHAVPLTL-------VAGLGHAGM-----GNMDWSLLGYLLLGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + L+  I  + L    + ++    +  A
Sbjct: 228 GIYLGSHLTGRISDRVLRPCLAGMLLLIGYKLA 260



 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 28/57 (49%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
            ++   I G+V GF+ G  GVGGG     ++L++G S   A  T    +A+     +
Sbjct: 4   GSFGFTIAGLVVGFIVGMTGVGGGSLMTPILLWFGISPATAVGTDLLYAAITKASGV 60



 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 42/120 (35%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + G +  L  +G G +    L   +  +           +GT +    P ++
Sbjct: 148 ILTVLTGVVLGVMVTLTSIGAGALGTVALFLLYPFL------VTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G ++  +L   +        + S +   +    L    A   LL+G  +  
Sbjct: 202 VAGLGHAGMGNMDWSLLGYLLLGSLPGIYLGSHLTGRISDRVLRPCLAGMLLLIGYKLAF 261


>gi|291085982|ref|ZP_06354560.2| inner membrane protein YfcA [Citrobacter youngae ATCC 29220]
 gi|291069067|gb|EFE07176.1| inner membrane protein YfcA [Citrobacter youngae ATCC 29220]
          Length = 261

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 99/262 (37%), Gaps = 25/262 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            Y  ++ + + ++G ++ + G GGG + +  L            +    A+ T+      
Sbjct: 16  SYFVIMFMVALVAGFINVVSG-GGGFLSIGALLI--------SGLPPANALATNKIQALG 66

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +S+ S +   R G IN++  K       I + + + +I  ++   L K   +  + + I 
Sbjct: 67  SSLTSGIYFLRRGHINVQEHKYVFLSAFIGSALGTTLIQFIEPQVLKKLLPVLIIAVAIY 126

Query: 141 MLKRDR---LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            +          +++        I G   GF  G LG G G F  L  +L +G SI KA 
Sbjct: 127 FISAPNLSEPKRKQQISLFLFSLICGGCIGFYDGFLGAGAGSFYTLCYILLWGYSIDKAQ 186

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S  ++      ++L  I+ G  +     WSLG       L++     L   L   +  
Sbjct: 187 IHSNFINLASNIASILFFIFGGKMI-----WSLG-------LVMFAGQSLGARLGATVVL 234

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
             GKK +     ++    S   
Sbjct: 235 TRGKKVIRPMIVIVSICISVKM 256


>gi|326795569|ref|YP_004313389.1| hypothetical protein Marme_2312 [Marinomonas mediterranea MMB-1]
 gi|326546333|gb|ADZ91553.1| protein of unknown function DUF81 [Marinomonas mediterranea MMB-1]
          Length = 253

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/269 (20%), Positives = 95/269 (35%), Gaps = 34/269 (12%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I A    G   G+ GVGGG +M P+L     L G       H+A+GT L       
Sbjct: 3   IFWYIAAGVGVGLAVGITGVGGGSLMTPLLL----LFGFPP----HIAIGTDLMYAGIAK 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
                 H R G +N KI+          +++T  ++S  +     +S L+       +L 
Sbjct: 55  STGVYMHARRGNVNWKIMGAMAAGSLPASLITIWVLSGFEHPEHYQSTLSATLGFMLVLT 114

Query: 138 GILMLKRDR------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY--G 189
             +++ R R           +    Y+ +  G+V G L     VG G     ++L     
Sbjct: 115 AAVLIFRKRLLSFLNPNLTEQQSRTYI-FFGGIVLGVLVTLTSVGAGALGTAMLLLLFPL 173

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
                   T    +  +   A +  ++            LG V+   +L +L  SI    
Sbjct: 174 MQAKNVVGTDLAHAVPLTLVAGIGHVF------------LGNVDYFLLLGLLIGSIPAIY 221

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           + T+L+  +  + L    +  +      +
Sbjct: 222 VGTRLASFVPNQVLQPILASTLMAFGVKY 250



 Score = 39.7 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I     + G L  L  VG G +   +L   F LM           +GT L    P ++
Sbjct: 139 TYIFFGGIVLGVLVTLTSVGAGALGTAMLLLLFPLMQ------AKNVVGTDLAHAVPLTL 192

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G ++  +L   +        V + + S V    L    A   +  G+  L 
Sbjct: 193 VAGIGHVFLGNVDYFLLLGLLIGSIPAIYVGTRLASFVPNQVLQPILASTLMAFGVKYLF 252


>gi|315639646|ref|ZP_07894786.1| permease [Enterococcus italicus DSM 15952]
 gi|315484607|gb|EFU75063.1| permease [Enterococcus italicus DSM 15952]
          Length = 279

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 82/265 (30%), Gaps = 51/265 (19%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++ P+L+ AF L        +  A+G S+  +  TS  + + + +   +N+++      
Sbjct: 25  IIITPMLTLAFGLD-------IKYAIGASVISVIATSSGASIAYLKDDLLNLRVAMFLEI 77

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG-- 163
              I  +V +L+        L   F    L     M K+     +       V       
Sbjct: 78  ATTIGAIVGALLTGIFAPQILYVFFGALLLFSAYNMAKKILFIKKDHLYQGPVSKTVARL 137

Query: 164 -----------------------------MVTGFLSGALGVGGGIFTNLLM-LFYGASIY 193
                                           G  SG LG+G G F  L M       + 
Sbjct: 138 NLNGRYYDKQEQREISYELTHLTGGFSMMFGAGIASGLLGIGSGAFKVLAMDTIMKMPLK 197

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            ++ATS  +  + A  +  + +++G                     I    ++   + T+
Sbjct: 198 PSSATSNLMMGVTAAASATIYLFNGSIQP------------LIAGPIAIGVLVGASVGTR 245

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVF 278
           +   +  + L + F  ++       
Sbjct: 246 VMPRLKARTLRMLFVPVLLYLGVQM 270



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G  SGL G+G G   V  +    +       + +  +  TS  ++  T+  S   + 
Sbjct: 167 FGAGIASGLLGIGSGAFKVLAMDTIMK-------MPLKPSSATSNLMMGVTAAASATIYL 219

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +G+I   I       + +   V + ++  +    L   F    L +G+ M+ +
Sbjct: 220 FNGSIQPLIAGPIAIGVLVGASVGTRVMPRLKARTLRMLFVPVLLYLGVQMVVK 273


>gi|196035068|ref|ZP_03102474.1| putative membrane protein [Bacillus cereus W]
 gi|195992132|gb|EDX56094.1| putative membrane protein [Bacillus cereus W]
          Length = 255

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFIIGFYDGFLGPGTGSFLMFALLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNIGALLMFMYVG 201



 Score = 35.4 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|75676620|ref|YP_319041.1| hypothetical protein Nwi_2436 [Nitrobacter winogradskyi Nb-255]
 gi|74421490|gb|ABA05689.1| Protein of unknown function DUF81 [Nitrobacter winogradskyi Nb-255]
          Length = 346

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 77/201 (38%), Gaps = 15/201 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
               +  ASF++ +LS + G G GL+++P+L     +  +  ++ +  A          +
Sbjct: 2   IYLFLFAASFIAFSLSVICGGGAGLLLIPLLGYYLPVSQVPAALTLGTAT---------S 52

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+           I   + + ++    +  V+ + ++S+++  +L     +F +    L+
Sbjct: 53  SISRIWIFF--NAIRWDMARLFLPTAIVGVVLGAKLLSYLEPMYLELCMGLFLISNLPLL 110

Query: 142 LKRDRLYCERKFP---DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
            ++ +            ++     G + GF+SG  G  G +  N      G    +  AT
Sbjct: 111 FRKQKSKPASSASLAIPSWQIRSVGFLAGFISGLTGAVG-VLFNRFYFRCGLDNQELIAT 169

Query: 199 SAGVSALIAFPALLVRIYSGW 219
            A   A +    L +    G 
Sbjct: 170 RAANEAFLHVLKLSLYASLGL 190


>gi|71278091|ref|YP_269162.1| hypothetical protein CPS_2446 [Colwellia psychrerythraea 34H]
 gi|71143831|gb|AAZ24304.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
          Length = 247

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 96/256 (37%), Gaps = 25/256 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   +F++G +S + G GG +V+ PVL  A         +    A+ T+       ++ S
Sbjct: 6   LTAVAFIAGFISSIAGAGGAIVL-PVLLWA--------GLPPLNALATNKFQSVFGTLSS 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            +   R G I++K L+  +    + +V+ + ++  +   +L+       +++ + M+   
Sbjct: 57  TINFFRKGYIDLKALRPALCYAFVGSVIGTYLVQQISTDYLSVMMPYLLIVLALYMMFSP 116

Query: 146 RLYCERKFP----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
            +  E   P      +  +I G +  +        G  F        G ++ KATA +  
Sbjct: 117 TITDEDLPPKISEKAFAPFIGGGIGLYGGFFGPGMGSFFAVAFASLRGFNMRKATAFTKP 176

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           +  ++   ++++ ++             G +     + +    ++   L + L    G  
Sbjct: 177 LVLIVNTTSMIIFLWG------------GHIVWSLAITMAASQVVGARLGSNLVIHRGVA 224

Query: 262 YLTIGFSMIMFTTSFV 277
            +     ++    +  
Sbjct: 225 LIKPLIVLMTLAIAIK 240



 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 44/121 (36%), Gaps = 13/121 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
                  + GF+S   G GG I    ++L+ G     A AT+   S      + +     
Sbjct: 5   GLTAVAFIAGFISSIAGAGGAIVL-PVLLWAGLPPLNALATNKFQSVFGTLSSTINF--- 60

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G++++ A+   L  + + + + T L   I   YL++    ++   +  
Sbjct: 61  ---------FRKGYIDLKALRPALCYAFVGSVIGTYLVQQISTDYLSVMMPYLLIVLALY 111

Query: 278 F 278
            
Sbjct: 112 M 112


>gi|193212673|ref|YP_001998626.1| hypothetical protein Cpar_1018 [Chlorobaculum parvum NCIB 8327]
 gi|193086150|gb|ACF11426.1| protein of unknown function DUF81 [Chlorobaculum parvum NCIB 8327]
          Length = 278

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 87/259 (33%), Gaps = 45/259 (17%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +V+VP+L+           I +  A+G SL  +  TS  +   +   G  N++I      
Sbjct: 30  VVIVPLLTLGL-------GIDLRYAVGASLIAVIATSSGAAAAYVTEGYSNIRIGMFLEI 82

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK------ 159
              I  +  + +   +  + +   F +  L    L  +    + ++   D          
Sbjct: 83  ATTIGALFGAFLAGILSTNIIAIVFGVVLLYSAWLSSRPKEDHSDQTESDALATRLKLNS 142

Query: 160 -------------------YIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATS 199
                              +    + G LSG LG+G G    L M          +T TS
Sbjct: 143 TYPTEDGIKHYSVHNVGAGFSLMGLAGVLSGLLGIGSGAVKVLAMDHAMRLPFKVSTTTS 202

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +  + A  +  V +  G+   GL        ++  +L IL  S     +  +L  +  
Sbjct: 203 NFMIGVTAAASAGVYLSRGYIDPGL--------SMPVMLGILAGSF----IGARLLMVAK 250

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            K+L + F  ++F      
Sbjct: 251 TKWLRLVFGAVIFVLGIEM 269



 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 7/113 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+G LSGL G+G G V V  +  A +L          V+  TS  +I  T+  S   +  
Sbjct: 167 LAGVLSGLLGIGSGAVKVLAMDHAMRL-------PFKVSTTTSNFMIGVTAAASAGVYLS 219

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            G I+  +    +  +   + + + ++      +L   F     ++GI M+  
Sbjct: 220 RGYIDPGLSMPVMLGILAGSFIGARLLMVAKTKWLRLVFGAVIFVLGIEMIYN 272


>gi|303328108|ref|ZP_07358547.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
 gi|302861934|gb|EFL84869.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
          Length = 259

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 92/253 (36%), Gaps = 27/253 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +   A+ + G +  + G GGGL+ +P L     L G+      H+A+GT+     
Sbjct: 6   LSTILICTGAALVGGFIDAIAG-GGGLITMPALL----LTGVPP----HLALGTNKVSSC 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             + ++     R   +  ++    +    +     S++  +V+   L K       +   
Sbjct: 57  VGTSVALGNFARSHLVLWRLALAGLAFSLLGAYAGSILALYVNSEILGKILVGLLPVGMC 116

Query: 140 LMLKRDRLYCERKFPDNYVKY-----IWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIY 193
             L   +       P    ++     +  ++ G   G  G G G F  L   +     + 
Sbjct: 117 ATLLPKKERECAPRPLEGARFWTLVPLVCLLIGAYDGFFGPGTGSFLILAFHWILRVGLI 176

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +A+ATS  ++    F A++  I+ G             V     L +   S++   L ++
Sbjct: 177 EASATSKVLNLASNFGAVVAFIWHGK------------VLWPLALAMTGGSVIGNWLGSR 224

Query: 254 LSYMIGKKYLTIG 266
            +  +G K +   
Sbjct: 225 TAIRVGAKAVRRF 237


>gi|107104124|ref|ZP_01368042.1| hypothetical protein PaerPA_01005197 [Pseudomonas aeruginosa PACS2]
          Length = 324

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 83/252 (32%), Gaps = 21/252 (8%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +   F +  + G  G+  G+        +        S  +H+A          T+  S 
Sbjct: 86  VAVGFFAQVIDGALGMAYGITAT-TFLLSAGATPAAASASVHIAE-------VFTTGFSG 137

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD- 145
           + H + G +N  +    +    I  V+ +++I+  D   L    + + LLMG+ +L +  
Sbjct: 138 ISHVKLGNVNKSLFLRLLLPGMIGAVLGAVLITRFDGHQLKPFISAYLLLMGLYILSKAY 197

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
           R   +R+ P +  K       GF+  A G G G      ++  G+       +       
Sbjct: 198 RHVIKRRAPRHVAKLAL--FGGFVDAAGGGGWGPVVTSSLIGSGSDPRTTIGSVNFAEFF 255

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           +   +    I      +              V  ++   +   P A  L   +  + L +
Sbjct: 256 LTIASATSFILLAGQPDT----------WKMVAGLVFGGLFAAPFAALLCKKLSPRTLLV 305

Query: 266 GFSMIMFTTSFV 277
               ++   S  
Sbjct: 306 IVGTLITLISAY 317


>gi|148548702|ref|YP_001268804.1| hypothetical protein Pput_3494 [Pseudomonas putida F1]
 gi|148512760|gb|ABQ79620.1| protein of unknown function DUF81 [Pseudomonas putida F1]
          Length = 261

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 93/273 (34%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             +A  + G + G+ GVGGG +M P+L            I    A+GT L   A T    
Sbjct: 8   FTIAGLVVGFIVGMTGVGGGSLMTPILLWF--------GIHPATAVGTDLLYAAITKASG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
              H R+  I+ KI             +T   +S +          + +  A+  +L  +
Sbjct: 60  VWVHARNKNIDWKITGLLSLGSVPAAALTLWFLSTLHTDTSALNAIIKQGLAVVLILTAL 119

Query: 140 LMLKRDRLYC-----------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + RL                   N +  + G+V G +     +G G      L +L
Sbjct: 120 AILFKSRLQAFASRHAGDHYHLSDRSLNTLTVLTGVVLGIMVTLTSIGAGALGTVALFLL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +          +G G  G+     G ++   +  +L  S+ 
Sbjct: 180 YPFLVTRRLVGTEIAHAVPLTL-------VAGLGHAGM-----GNMDWSLLGYLLLGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + L+  I  + L    + ++    +  A
Sbjct: 228 GIYLGSHLTGRISDRVLRPCLATMLLLIGYKLA 260



 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 27/57 (47%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
            ++   I G+V GF+ G  GVGGG     ++L++G     A  T    +A+     +
Sbjct: 4   GSFGFTIAGLVVGFIVGMTGVGGGSLMTPILLWFGIHPATAVGTDLLYAAITKASGV 60



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 42/120 (35%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + G +  L  +G G +    L   +  +           +GT +    P ++
Sbjct: 148 TLTVLTGVVLGIMVTLTSIGAGALGTVALFLLYPFL------VTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G ++  +L   +        + S +   +    L    A   LL+G  +  
Sbjct: 202 VAGLGHAGMGNMDWSLLGYLLLGSLPGIYLGSHLTGRISDRVLRPCLATMLLLIGYKLAF 261


>gi|322378370|ref|ZP_08052825.1| integral membrane protein [Helicobacter suis HS1]
 gi|321149183|gb|EFX43628.1| integral membrane protein [Helicobacter suis HS1]
          Length = 276

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 77/217 (35%), Gaps = 30/217 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ V   L+G  +G FG+GGG V+VP     F     +       A+G SL  +  +S+
Sbjct: 10  LVLCVVGVLTGITAGFFGIGGGEVVVPA--AIFAGFSYNH------AVGISLAQMLCSSL 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +  + + + G +N++          I  ++   ++  +D   L   F +      I    
Sbjct: 62  VGSVINYKKGLLNLQEGIFAACGGLIGAILGGFLLKVIDDRILMGVFVVVVCYTFIEYAF 121

Query: 144 RDRLYCERK---------------------FPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
             +    +                         + +  + G++TG  S  LG+GGGI   
Sbjct: 122 GRKERHYQNAHFYMHAKKAPLKIPIIHWHLSKTHAILVLAGLITGIFSIPLGMGGGILMV 181

Query: 183 LLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
             + ++      K            +   ++   +SG
Sbjct: 182 PFLGYFLKYDTQKIVPLGLFFVIFSSLSGVISLAHSG 218



 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 23/58 (39%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
             V  + G++TG  +G  G+GGG       +F G S   A   S       +    ++
Sbjct: 9   ALVLCVVGVLTGITAGFFGIGGGEVVVPAAIFAGFSYNHAVGISLAQMLCSSLVGSVI 66


>gi|269960680|ref|ZP_06175052.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269834757|gb|EEZ88844.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 258

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 94/261 (36%), Gaps = 26/261 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +   S ++ TL+ L G G GL+  P+L            +   VA+GT         +
Sbjct: 14  LTLFFGSLIANTLASLSGGGAGLLQFPLLIFL--------GLPFSVALGTHKVASVALGL 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   H + GTI  K+    I V  I  V+ + +I  +  +   K      L +GI    
Sbjct: 66  GAASTHLKAGTIKPKVALYLILVGSIGVVIGANLIVQIPDNIAEKMLGAMILALGIYSRF 125

Query: 144 RDR-----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
           + +     +   R      V  +  M  G ++G+L  G G+   L ++ ++G    +A A
Sbjct: 126 KKQLGQTEIPTHRDTFGWIVGGLGLMFIGVVNGSLTAGSGLLVTLFLVRWFGYDYKQAVA 185

Query: 198 -TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T   V         +  + +G             ++   + ++L  S L   L    + 
Sbjct: 186 YTMICVGLFWNGIGGVAVVQAGAP-----------IHWAWLPVLLVSSFLGGSLGAWAAT 234

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
               + + I F ++ F     
Sbjct: 235 KYSNRVIKIAFEILTFAVGIK 255


>gi|238928108|ref|ZP_04659868.1| protein of hypothetical function DUF81 [Selenomonas flueggei ATCC
           43531]
 gi|238884068|gb|EEQ47706.1| protein of hypothetical function DUF81 [Selenomonas flueggei ATCC
           43531]
          Length = 252

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 94/253 (37%), Gaps = 32/253 (12%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ ++  L G + G  G GG  V++ +L   F        + +H A+  +LG +A T++ 
Sbjct: 1   MLFLSMLLMGGIIGFVGAGGSGVIITLLVVGF-------GVPIHQALAVALGSMAFTTLS 53

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + H R   +             +  ++ +++ +H++   L+    +  L   +L+  R
Sbjct: 54  GAVSHYREHEVIPLTGAVLGAGGLLGALLGAVISNHMEAPNLSLFTGVMLLSSAVLLYLR 113

Query: 145 D--------RLYCERKFPDNYVKYI----WGMVTGFLSGALGVGGGI-FTNLLMLFYGAS 191
                     ++   +        +     G + G LSGA G+G        LM+ +G  
Sbjct: 114 IYRAVWLSAHIHVREELLTGRRLCLCGLPVGFLCGVLSGAFGIGAAAYIQIALMVVFGVP 173

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           + +A  T+  +   I+    +  +  G     L             +  L    L + + 
Sbjct: 174 LLQAIGTTMMIIVPISVSGGIGYLLYGQLEPWL------------FIQTLVALSLGSYVG 221

Query: 252 TKLSYMIGKKYLT 264
            KL+++     L 
Sbjct: 222 AKLTHLAPLPVLR 234



 Score = 38.9 bits (90), Expect = 0.86,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 7/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +   FL G LSG FG+G    +   L   F        + +  A+GT++ +I P SV   
Sbjct: 141 LPVGFLCGVLSGAFGIGAAAYIQIALMVVF-------GVPLLQAIGTTMMIIVPISVSGG 193

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + +  +G +   +    +  L + + V + +        L         + G +M+ 
Sbjct: 194 IGYLLYGQLEPWLFIQTLVALSLGSYVGAKLTHLAPLPVLRFWIVALPTIGGTIMIL 250


>gi|255323830|ref|ZP_05364956.1| YtnM protein [Corynebacterium tuberculostearicum SK141]
 gi|255299010|gb|EET78301.1| YtnM protein [Corynebacterium tuberculostearicum SK141]
          Length = 349

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 78/230 (33%), Gaps = 22/230 (9%)

Query: 41  GVGGGLVMVPVLSKAFQLMGIDDSICM-HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
           G+G G  +          +G   +  + H A          T+ +S + H R G ++ K 
Sbjct: 20  GIGMGFGVTSTTMLLLAGLGPAQASAVVHTAE-------LGTTAISGLSHARFGNVDWKT 72

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-----KRDRLYCERKFP 154
           +        I   + + ++S++  +      A+  + +G  ++      R R    ++  
Sbjct: 73  VVRLGVPGGIAAFLGATLLSNISTAAAAPVTALILVGIGANLIWRFSQPRRRGSAYKRTH 132

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS-IYKATATSAGVSALIAFPALLV 213
                   G+V GF+    G G G  +   ++  G     +   T      L+ F A   
Sbjct: 133 STPFLAGLGLVGGFVDSTGGGGWGPVSTSTLMAIGREQPRRIVGTVNAAEFLVTFGATAG 192

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            I   W             N+ AV+ +L    +  P+A  L   I    L
Sbjct: 193 FIVGLWHDIVA--------NLAAVIALLIGGAITAPIAAWLISRINPILL 234


>gi|167746848|ref|ZP_02418975.1| hypothetical protein ANACAC_01560 [Anaerostipes caccae DSM 14662]
 gi|167653808|gb|EDR97937.1| hypothetical protein ANACAC_01560 [Anaerostipes caccae DSM 14662]
          Length = 255

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 94/261 (36%), Gaps = 25/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             +  +A   +G  +G  G+    V+ P+L      +G++     ++A+G +L      S
Sbjct: 5   FIICFLAGIGAGLGTGFAGMSAAAVISPMLI---TFLGMNP----YMAVGIALASDVFAS 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +S   + +H  +++K     +  +   T+V S + S V  + +        LL+GI  +
Sbjct: 58  AVSAYTYGKHKNLDIKNGLVMMISVLCFTLVGSYISSLVPSTAMGGFSTFMTLLLGIKFI 117

Query: 143 KRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKA 195
            R  +  +                + G V GF+ G +G GGG+   LL+    G  +  A
Sbjct: 118 VRPVMTTKSSMDLVDAKKRFLQSVLCGSVVGFICGFVGAGGGMMMLLLLTSVLGYELKTA 177

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TS  +    A    L     G   + L            +L  +  + L   +A K +
Sbjct: 178 VGTSVFIMTFTALTGSLSHFAIGGRPDMLS-----------LLFCVLSTFLWARVAAKFA 226

Query: 256 YMIGKKYLTIGFSMIMFTTSF 276
                  L      ++     
Sbjct: 227 NKASAIVLNRATGAVLTVLGL 247


>gi|228968652|ref|ZP_04129632.1| integral membrane protein [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228791038|gb|EEM38659.1| integral membrane protein [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 255

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNVGALLMFMYVG 201



 Score = 35.8 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|229120562|ref|ZP_04249807.1| integral membrane protein [Bacillus cereus 95/8201]
 gi|228662847|gb|EEL18442.1| integral membrane protein [Bacillus cereus 95/8201]
          Length = 255

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNVGALLMFMYVG 201



 Score = 35.8 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|120599373|ref|YP_963947.1| hypothetical protein Sputw3181_2569 [Shewanella sp. W3-18-1]
 gi|120559466|gb|ABM25393.1| protein of unknown function DUF81 [Shewanella sp. W3-18-1]
 gi|319425934|gb|ADV54008.1| sulfite exporter, TauE/SafE family [Shewanella putrefaciens 200]
          Length = 257

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 79/209 (37%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  +  +    L+   + ++G +  + G GGGL+ +P L  A         +   VA+GT
Sbjct: 1   MEFELTLQIAVLLFTVAMVAGFIDSIAG-GGGLLTIPALMWA--------GLPPAVALGT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  + +   R G +++K +K  +    I   + ++++  VD   L       
Sbjct: 52  NKLQACGGSFFASLYFVRKGLVDLKSVKLALICAFIGAALGTILVQLVDTKVLELMLPFL 111

Query: 134 CLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
            L +G   L   ++  + K          +   +  G   G  G G G  F    +   G
Sbjct: 112 ILAIGCYFLFSKKISEDDKHQVLTPTAFAFTAALGVGLYDGFFGPGTGSFFALAFVSLAG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             + KATA +  ++      +L+     G
Sbjct: 172 FGLAKATAHAKLLNFSTNIASLIFFALGG 200


>gi|91974844|ref|YP_567503.1| hypothetical protein RPD_0364 [Rhodopseudomonas palustris BisB5]
 gi|91681300|gb|ABE37602.1| protein of unknown function DUF81 [Rhodopseudomonas palustris
           BisB5]
          Length = 272

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 73/205 (35%), Gaps = 15/205 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            + + +  L G +  L G GG ++ VP+L     +         HVA+GTS   +A +++
Sbjct: 8   LITVASGGLVGFILALIGGGGSVLAVPLLVYVVGIR------SPHVAIGTSSIAVAISAL 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + H   G +       +           S +   +D   L   F +  +++G+LM +
Sbjct: 62  ANLLGHWAAGNVRWNCALVFSAAGIGGAFAGSFIAKQIDGQKLLLLFGMLMVVIGVLMSR 121

Query: 144 RD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYK 194
           R         RL               G   G L+G  G+GGG      L+L  G  +  
Sbjct: 122 RQSGGGDPTIRLTIATAKTMLPKLIGTGFGVGALAGFFGIGGGFLIVPGLILATGMPLTS 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGW 219
           A  +S                 SG 
Sbjct: 182 AIGSSLVAVFAFGASTAASYALSGL 206



 Score = 35.8 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 46/125 (36%), Gaps = 14/125 (11%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG--ASIYKATATSAGVSALIAFPALLVR 214
            +    G + GF+   +G GG +    L+++     S + A  TS+   A+ A   LL  
Sbjct: 8   LITVASGGLVGFILALIGGGGSVLAVPLLVYVVGIRSPHVAIGTSSIAVAISALANLLG- 66

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                       W+ G V     L+     I      + ++  I  + L + F M+M   
Sbjct: 67  -----------HWAAGNVRWNCALVFSAAGIGGAFAGSFIAKQIDGQKLLLLFGMLMVVI 115

Query: 275 SFVFA 279
             + +
Sbjct: 116 GVLMS 120


>gi|319938859|ref|ZP_08013223.1| permease [Streptococcus anginosus 1_2_62CV]
 gi|319811909|gb|EFW08175.1| permease [Streptococcus anginosus 1_2_62CV]
          Length = 278

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 98/291 (33%), Gaps = 50/291 (17%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++ YI  + +    +G L  L G+GGG+V+ PVL+  F        + +  A+G S+  +
Sbjct: 1   MLTYIFTMTLVGIFAGILGALLGLGGGIVITPVLTLLF-------GVDIKYAVGASIIAV 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS  S + + +   +N++I         +   V +++    +   L   +    L   
Sbjct: 54  LATSSGSAIAYLKDDMLNLRIAMFLEIFTTLGAFVGAMLSVITNSQILFLLYGALMLFQA 113

Query: 139 ILMLKRDRLY------------------------------CERKFPDNYVKYIWGMVTGF 168
             M ++ R                                 + +  +     +     G 
Sbjct: 114 FNMYQKIRAKKEIQTVSHNDTIAEKLNLGGEYFDKGLNQTIKYQVTNVPGGSVVMFFAGV 173

Query: 169 LSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           +S  LG+G G F  L M       +  ++ATS  +  +    + +  ++ G     L   
Sbjct: 174 MSALLGIGAGAFKVLAMDTVMKMPLKASSATSNFMMGVTGTASAIFYLFIGQINPVLVT- 232

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                     L +L  S     + +++   +  K L   F + +       
Sbjct: 233 -------PIALGVLAGSF----IGSRIMPYVPVKVLRWIFLVALLALGVQM 272



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V  F +G +S L G+G G   V  +    +       + +  +  TS  ++  T   S +
Sbjct: 166 VVMFFAGVMSALLGIGAGAFKVLAMDTVMK-------MPLKASSATSNFMMGVTGTASAI 218

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +   G IN  ++      +   + + S ++ +V    L   F +  L +G+ M  R
Sbjct: 219 FYLFIGQINPVLVTPIALGVLAGSFIGSRIMPYVPVKVLRWIFLVALLALGVQMFIR 275


>gi|116333015|ref|YP_794542.1| permease [Lactobacillus brevis ATCC 367]
 gi|116098362|gb|ABJ63511.1| Predicted permease [Lactobacillus brevis ATCC 367]
          Length = 281

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 88/253 (34%), Gaps = 43/253 (16%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            ++ +   + +  A+G S+  +  TS  S + + R   +N+++            +V +L
Sbjct: 32  PILTLGMGLNIKYAIGASIIAVIATSSGSTIAYLRDNVLNLRVAMFLEIATTTGAIVGAL 91

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDR------------------------------ 146
           +   +D  +L   F    +  G  M ++ R                              
Sbjct: 92  LTGVLDPKYLYLLFGCLLVFSGWNMYRKLRRGQEVLQRVEPDKIAAKLKLNGSYFDKAEM 151

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSAL 205
              + +       +      G  SG LG+G G F  + M  F    +  +++TS  +  +
Sbjct: 152 KNVDYQVEHVPAGFSVMFGAGVASGLLGIGSGAFKVMAMDTFMKMPLKPSSSTSNLMMGV 211

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
            A  +  V  ++G  L          + +   L IL  ++    + +++  ++  +++ I
Sbjct: 212 TAAASATVYFFNGAILPS--------IAVPMALGILGGAV----IGSRIMQVLPARWIRI 259

Query: 266 GFSMIMFTTSFVF 278
            F  I+       
Sbjct: 260 VFIPIILYIGLEM 272



 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 11/132 (8%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV--AMG 72
           + D  V+++       F +G  SGL G+G G         AF++M +D  + M +  +  
Sbjct: 153 NVDYQVEHVPAGFSVMFGAGVASGLLGIGSG---------AFKVMAMDTFMKMPLKPSSS 203

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           TS  ++  T+  S   +  +G I   I       +    V+ S ++  +   ++   F  
Sbjct: 204 TSNLMMGVTAAASATVYFFNGAILPSIAVPMALGILGGAVIGSRIMQVLPARWIRIVFIP 263

Query: 133 FCLLMGILMLKR 144
             L +G+ ML +
Sbjct: 264 IILYIGLEMLFK 275


>gi|114705915|ref|ZP_01438818.1| hypothetical protein FP2506_15654 [Fulvimarina pelagi HTCC2506]
 gi|114538761|gb|EAU41882.1| hypothetical protein FP2506_15654 [Fulvimarina pelagi HTCC2506]
          Length = 247

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 74/226 (32%), Gaps = 24/226 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +P L     L G+D        +GT+       S  + + +   G +++K    
Sbjct: 25  GGGLITIPALL----LSGMDPLAV----LGTNKLQSLFGSGSAAIAYSAKGHVDLKTQWP 76

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD---RLYCERKFPDNYVK 159
                    +  +L+   V    L  A     + + +    R     L  ER+    +  
Sbjct: 77  GALASGFGAICGALLAFVVPTDVLETALPFLLIAVALFFAFRPGLGDLDRERRLSSFFFV 136

Query: 160 YIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
                + G   G  G G G  F    +   G  + KATA +  ++    F +LLV +   
Sbjct: 137 GFVVPLIGAYDGLFGPGTGSFFMIAFVTLAGYGVLKATAHTKLLNFSSNFGSLLVFVVG- 195

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
                      G V     L +     L   L    +   G K + 
Sbjct: 196 -----------GAVYWSVGLAMGIAQFLGARLGAATAMRFGSKLIR 230


>gi|91772312|ref|YP_565004.1| hypothetical protein Mbur_0246 [Methanococcoides burtonii DSM 6242]
 gi|91711327|gb|ABE51254.1| protein of unknown function DUF81 [Methanococcoides burtonii DSM
           6242]
          Length = 257

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 14/183 (7%)

Query: 41  GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKIL 100
           G+GG ++ VP+             I +  A+  +L +   T+  + + + R  T+++   
Sbjct: 21  GMGGAVIYVPLFYWL--------GIDLITAIAMALMLNVVTTASASVTYLRKKTVDLPTA 72

Query: 101 KDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK- 159
             +I    I   + + + + V + F+   F++     G+LM+    +       +  +K 
Sbjct: 73  APFILSSAIAAPLGAYVSTSVPEEFVLHTFSVVVAAAGVLMILLKDIGENDTTSNLDIKE 132

Query: 160 -----YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
                 I G+  GF++G LG+GGGIF   +++F G  + +A ATSA V    +    L  
Sbjct: 133 RLAIGIISGLFIGFIAGLLGIGGGIFLVPILVFMGFGVRRAPATSALVVLFSSLSGFLSH 192

Query: 215 IYS 217
           I +
Sbjct: 193 ISN 195



 Score = 35.4 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 9/113 (7%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            + + + + I++    G ++GL G+GGG+ +VP+L              +  A  TS  V
Sbjct: 129 DIKERLAIGIISGLFIGFIAGLLGIGGGIFLVPILVFM--------GFGVRRAPATSALV 180

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +  +S+  F+ H  +  I  + L     V  I   + S ++ ++    L+  F
Sbjct: 181 VLFSSLSGFLSHISNAQIEFRTLAILGIVSFIGGQLGSHLM-YLRFPSLSGFF 232


>gi|42780106|ref|NP_977353.1| hypothetical protein BCE_1030 [Bacillus cereus ATCC 10987]
 gi|42736024|gb|AAS39961.1| membrane protein, putative [Bacillus cereus ATCC 10987]
          Length = 255

 Score = 61.2 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I ++V +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIVGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNVGALLMFMYVG 201


>gi|196037301|ref|ZP_03104612.1| putative membrane protein [Bacillus cereus NVH0597-99]
 gi|196031543|gb|EDX70139.1| putative membrane protein [Bacillus cereus NVH0597-99]
          Length = 255

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNVGALLMFMYVG 201



 Score = 35.4 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|189424135|ref|YP_001951312.1| hypothetical protein Glov_1069 [Geobacter lovleyi SZ]
 gi|189420394|gb|ACD94792.1| protein of unknown function DUF81 [Geobacter lovleyi SZ]
          Length = 250

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 83/258 (32%), Gaps = 19/258 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    + +   F +  ++G  G+G  + +    S     MGI  S    VA  +      
Sbjct: 5   LQLFWVCLGIGFGAQFVAGCLGMGYSVTI----SSVLLSMGISPS----VASASVHTSEV 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              ++S + H R+G +  +  K           + + ++ H   S +    A   L+MG+
Sbjct: 57  VNRLLSGLAHYRYGNVETRTFKLLALYGMAGAFIGAFVVVHTPVSLMRPLVAAGLLVMGL 116

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            +L        + F       + G + GF+    G G G      ++  G +      + 
Sbjct: 117 RILSSAFRQLPQAFIQRTRLGLLGFIGGFVDVIGGGGWGPVVTATLILQGKATNLVVGSI 176

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                 +A       +                 N   +  ++    +  P+A      + 
Sbjct: 177 NFAKFFVAVVESATLLLLLKSP-----------NWLMIAGLIAGGAVAAPIAAYTCAYVP 225

Query: 260 KKYLTIGFSMIMFTTSFV 277
           K+ LTI    ++   S  
Sbjct: 226 KRLLTILVGSLVCLLSLR 243


>gi|26988968|ref|NP_744393.1| hypothetical protein PP_2244 [Pseudomonas putida KT2440]
 gi|24983785|gb|AAN67857.1|AE016417_5 membrane protein, putative [Pseudomonas putida KT2440]
          Length = 261

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 93/273 (34%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             +A  + G + G+ GVGGG +M P+L            I    A+GT L   A T    
Sbjct: 8   FTIAGLVVGFIVGMTGVGGGSLMTPILLWF--------GIHPATAVGTDLLYAAITKASG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
              H R+  I+ KI             +T   +S +          + +  A+  +L  +
Sbjct: 60  VWVHARNKNIDWKITGLLSLGSVPAAALTLWFLSTLHTDTSALNAIIKQGLAVVLILTAL 119

Query: 140 LMLKRDRLYC-----------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + RL                   N +  + G+V G +     +G G      L +L
Sbjct: 120 AILFKSRLQAFASRHAGDHYHLSDRSLNILTVLTGVVLGIMVTLTSIGAGALGTVALFLL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +          +G G  G+     G ++   +  +L  S+ 
Sbjct: 180 YPFLVTRRLVGTEIAHAVPLTL-------VAGLGHAGM-----GNMDWSLLGYLLLGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + L+  I  + L    + ++    +  A
Sbjct: 228 GIYLGSHLTGRISDRVLRPCLATMLLLIGYKLA 260



 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 27/57 (47%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
            ++   I G+V GF+ G  GVGGG     ++L++G     A  T    +A+     +
Sbjct: 4   GSFGFTIAGLVVGFIVGMTGVGGGSLMTPILLWFGIHPATAVGTDLLYAAITKASGV 60



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 42/120 (35%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + G +  L  +G G +    L   +  +           +GT +    P ++
Sbjct: 148 ILTVLTGVVLGIMVTLTSIGAGALGTVALFLLYPFL------VTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G ++  +L   +        + S +   +    L    A   LL+G  +  
Sbjct: 202 VAGLGHAGMGNMDWSLLGYLLLGSLPGIYLGSHLTGRISDRVLRPCLATMLLLIGYKLAF 261


>gi|257070170|ref|YP_003156425.1| putative permease [Brachybacterium faecium DSM 4810]
 gi|256560988|gb|ACU86835.1| predicted permease [Brachybacterium faecium DSM 4810]
          Length = 306

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 7/96 (7%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL            +  H A  +SL ++  T++ S   H RHG ++ +    +  V  
Sbjct: 30  VPVLVFLL-------GMPAHSATASSLIIVLITALASLPHHARHGNVDWRNGLVFAGVSV 82

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  V+ S + + V    L   F +  + + + ML+R
Sbjct: 83  VGAVLGSRLSALVPAHILLTLFGVMLVAVAVAMLRR 118



 Score = 35.8 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 8/98 (8%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR-RHGTINMKILKDWI 104
            ++VP+L  A         + M  A GTSL V+   +  S +        I+      + 
Sbjct: 210 FIVVPMLVIAL-------GLAMRRASGTSLLVMVIATAASLLARIGTEVQIDWVTTLVFA 262

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                  ++   + +    S L  AF+     +  + L
Sbjct: 263 AGSAAGGMLGGPLSARARPSTLTLAFSALLGGVAAVTL 300


>gi|83749556|ref|ZP_00946543.1| Hypothetical Protein RRSL_00807 [Ralstonia solanacearum UW551]
 gi|83723792|gb|EAP70983.1| Hypothetical Protein RRSL_00807 [Ralstonia solanacearum UW551]
          Length = 456

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 90/244 (36%), Gaps = 26/244 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS-LGVIAPTSVMSFMEHRRHGTINMKILK 101
           GGGLV +P L  A+       ++     +GT+ L  ++ T+  +   + R   I      
Sbjct: 226 GGGLVQIPALFSAY------PNLAPATLIGTNKLASMSGTATAAVR-YGRTVRIYWGATA 278

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP-----DN 156
             +    + +++ +  ++H+    L +A      ++ +  + +  L  E         + 
Sbjct: 279 PAMVTAFLCSLLGAWALTHIPAEPLRRALPFVLAVLLVYTVAKKDLGAEHAPSLSGWRER 338

Query: 157 YVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
               + G V GF  G  G G G     + +  +G     A+A++  V+      ALL+  
Sbjct: 339 ATALLAGAVLGFYDGVFGPGTGSFLMIVFVRVFGYDFLHASASTKIVNLATNVAALLLLA 398

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                         G V     L++   ++L     + L+   G +++   F +++    
Sbjct: 399 AK------------GHVWWQLGLVMAVANVLGNQAGSYLALKHGSRFVRKVFIVVVLALI 446

Query: 276 FVFA 279
              A
Sbjct: 447 LKTA 450



 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 7/114 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A  + G   G+FG G G  ++ V  + F    +  S    +       V   T+V + 
Sbjct: 342 LLAGAVLGFYDGVFGPGTGSFLMIVFVRVFGYDFLHASASTKI-------VNLATNVAAL 394

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +     G +  ++         +     S +       F+ K F +  L + + 
Sbjct: 395 LLLAAKGHVWWQLGLVMAVANVLGNQAGSYLALKHGSRFVRKVFIVVVLALILK 448


>gi|189500913|ref|YP_001960383.1| hypothetical protein Cphamn1_1991 [Chlorobium phaeobacteroides BS1]
 gi|189496354|gb|ACE04902.1| conserved hypothetical protein [Chlorobium phaeobacteroides BS1]
          Length = 121

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 11/126 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPT 81
           + L++     +G LSG+FG+GGGL++VP L               H A  TSL  ++ P 
Sbjct: 3   MILMLFTGVAAGVLSGMFGIGGGLIIVPALVLILGF-------SQHTANATSLIALLLPV 55

Query: 82  SVMSFMEHRRHGTINMKILKD---WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            ++  +E+ R G I  + L         L       + + + + +  L K FA+F  ++ 
Sbjct: 56  GLLGVLEYYRAGKITSEHLWYGVFIAIGLFAGAFFGAKIATSLSQDMLRKIFAVFIGIVA 115

Query: 139 ILMLKR 144
           + M  +
Sbjct: 116 VRMWLQ 121



 Score = 40.8 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 9/122 (7%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIY 216
           +    G+  G LSG  G+GGG+     ++   G S + A ATS          ALL+ + 
Sbjct: 5   LMLFTGVAAGVLSGMFGIGGGLIIVPALVLILGFSQHTANATS--------LIALLLPVG 56

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
               L       +   ++   + I            K++  + +  L   F++ +   + 
Sbjct: 57  LLGVLEYYRAGKITSEHLWYGVFIAIGLFAGAFFGAKIATSLSQDMLRKIFAVFIGIVAV 116

Query: 277 VF 278
             
Sbjct: 117 RM 118


>gi|291277368|ref|YP_003517140.1| hypothetical protein HMU11600 [Helicobacter mustelae 12198]
 gi|290964562|emb|CBG40415.1| putative inner membrane protein [Helicobacter mustelae 12198]
          Length = 272

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 70/202 (34%), Gaps = 16/202 (7%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L ++    SG  SGLFG+GGG V+VPV++             MH A+  S+  +   S  
Sbjct: 4   LYMLVGVFSGITSGLFGLGGGTVIVPVMTSL--------GFSMHHAVAISVFQMIFASTF 55

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + +    +++          I    + L++  + +  L   F     +     L +
Sbjct: 56  GSIINYKKRLFSLRDGIFLGIGGMIGASFSGLVLQVLSEVLLTFIFLCLMCISLYKFLTK 115

Query: 145 DRLYC-------ERKFPDNYVKYIWGMVTGFLS-GALGVGGGIFTNLLMLFYGASIYKAT 196
              +        ++K     V    G  TG  +      GG I   +LM F G    K +
Sbjct: 116 KSSHKLKETEFRDQKLRYASVMIFAGAFTGVFAISLGIGGGLILIPILMYFLGFDAKKIS 175

Query: 197 ATSAGVSALIAFPALLVRIYSG 218
             S       +    +     G
Sbjct: 176 VLSLFFIICSSVSGAISFFRHG 197



 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
           ++  + G+ +G  SG  G+GGG     +M   G S++ A A S       +    ++
Sbjct: 3   FLYMLVGVFSGITSGLFGLGGGTVIVPVMTSLGFSMHHAVAISVFQMIFASTFGSII 59


>gi|228932350|ref|ZP_04095232.1| integral membrane protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228827286|gb|EEM73038.1| integral membrane protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 255

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNVGALLMFMYVG 201



 Score = 35.4 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|319637688|ref|ZP_07992454.1| integral membrane protein [Neisseria mucosa C102]
 gi|317400843|gb|EFV81498.1| integral membrane protein [Neisseria mucosa C102]
          Length = 256

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 90/265 (33%), Gaps = 24/265 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +   +++  F +G +    G GGGL+ +P L           S+       +  G    
Sbjct: 5   SFFYYLVLVGFAAGLMDAAVG-GGGLLQIPGLFNLLPNATPVASVMGINKFASCCGT--- 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             + +  ++ R   +  K+L     +    + + +  + +    ++  A  +  + M + 
Sbjct: 61  --LTAMGQYLRRIPVPWKMLLPAAALAFAASYLGAKTVVYFPVQYMKPAMLVIMIAMCLY 118

Query: 141 MLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYK 194
              +  L    +              +G + GF  G  G G G     + + FYG     
Sbjct: 119 TFLKKDLGQTARTEKLTRRETLWGLFFGALIGFYDGVFGPGTGSLLAFVFVRFYGYDFLA 178

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A A++  +++      L   I              G V     + +   ++    +  +L
Sbjct: 179 ANASAKVINSTTNLATLTFFIPQ------------GHVVWAWAIPLAVANLCGGVVGARL 226

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVFA 279
           +   G K L  GF +++  T   FA
Sbjct: 227 AIRGGTKLLRYGFMLLLCLTIGKFA 251


>gi|183219704|ref|YP_001837700.1| hypothetical protein LEPBI_I0280 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189909839|ref|YP_001961394.1| hypothetical protein LBF_0271 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167774515|gb|ABZ92816.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167778126|gb|ABZ96424.1| Hypothetical protein; putative membrane protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 325

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 80/291 (27%), Gaps = 81/291 (27%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++    F  G L+   G+GGG +  P     F L  +        A+  SL  +  ++
Sbjct: 19  VLVVFGLGFFVGYLASFLGLGGGFIYTPFFHSFFHLTAVQ-------AVAVSLAQMPVSA 71

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH---------------VDKSFLN 127
           +     + ++  I  +     +     +   T+                    + +    
Sbjct: 72  LSGLYVYFKNDKIRWRQGFLLLITSIPSAQYTAFAFGRFEDTPLGKQLYYGIPLSEFVYL 131

Query: 128 KAFAIFCLLMGILMLKRDRLYCER------------------------------------ 151
             F +F  ++ I  L       +R                                    
Sbjct: 132 IVFTVFLGILAIYNLIAALKKRKRYYEALSLVRSEPNVKSLDLDNQTNPKGLESNEKKSK 191

Query: 152 ----------KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSA 200
                          ++  + G+  G  S   G+GGG     L + ++  S  +A ATS 
Sbjct: 192 ITNHQTQFQFTKKSIFIVLLVGIFFGMFSSLFGIGGGFLAVPLFVYYFRMSPVEAVATSF 251

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
               L +F   +  +             LG ++    L+     I    + 
Sbjct: 252 LGIFLTSFGTTIQFLL------------LGKLHWELALVGSFGGIFGARIG 290



 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 7/126 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++++     G  S LFG+GGG + VP+    F++  ++       A+ TS   I  TS
Sbjct: 206 IFIVLLVGIFFGMFSSLFGIGGGFLAVPLFVYYFRMSPVE-------AVATSFLGIFLTS 258

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + ++    G ++ ++     F       + SL   +     +    + F  L+    L
Sbjct: 259 FGTTIQFLLLGKLHWELALVGSFGGIFGARIGSLKAVNAKPYTILLVTSFFQFLVVTWYL 318

Query: 143 KRDRLY 148
                 
Sbjct: 319 VAKLPK 324



 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALL 212
           P   V +  G   G+L+  LG+GGG         F+  +  +A A S     + A   L 
Sbjct: 17  PGVLVVFGLGFFVGYLASFLGLGGGFIYTPFFHSFFHLTAVQAVAVSLAQMPVSALSGLY 76

Query: 213 VR 214
           V 
Sbjct: 77  VY 78


>gi|312960636|ref|ZP_07775142.1| hypothetical protein PFWH6_2543 [Pseudomonas fluorescens WH6]
 gi|311285162|gb|EFQ63737.1| hypothetical protein PFWH6_2543 [Pseudomonas fluorescens WH6]
          Length = 261

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 98/273 (35%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            ++A  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   FVIAGLIVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
            + H ++  I+  I            ++T   ++ +          + +A  +  LL  +
Sbjct: 60  VLVHGKNKNIDWTITGWLTLGSVPAVLLTLWFLASLHTDPTVMNAVIKQALGVVLLLTAL 119

Query: 140 LMLKRDRL-----------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L +  L           Y       N +  + G + G +     +G G      L +L
Sbjct: 120 AILFKKTLLTFAQRHAGDSYHLNPRNLNALTVLTGAILGTMVALTSIGAGALGTVALFIL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +   +  +   T    +  +          +G G  G+     G ++   +  +L  S+ 
Sbjct: 180 YPFLATRRLVGTEIAHAVPLTL-------VAGLGHAGM-----GNMDWQLLGFLLMGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              + + ++  I    L    ++++    +  A
Sbjct: 228 GIYIGSHMTGKIPDGVLRPCLAVMLMAVGYKLA 260



 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 29/58 (50%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            N+   I G++ GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 4   GNFGFVIAGLIVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 61



 Score = 38.9 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 44/120 (36%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   +  +           +GT +    P ++
Sbjct: 148 ALTVLTGAILGTMVALTSIGAGALGTVALFILYPFL------ATRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G ++ ++L   +        + S M   +    L    A+  + +G  +  
Sbjct: 202 VAGLGHAGMGNMDWQLLGFLLMGSLPGIYIGSHMTGKIPDGVLRPCLAVMLMAVGYKLAF 261


>gi|229177468|ref|ZP_04304849.1| integral membrane protein [Bacillus cereus 172560W]
 gi|228606031|gb|EEK63471.1| integral membrane protein [Bacillus cereus 172560W]
          Length = 255

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 76/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I ++V +  +  ++   L     I    + I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSALKLFPITFIGSIVGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNVGALLMFMYVG 201



 Score = 35.8 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 51/120 (42%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ + L + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSALKLFPITFIGSIVGAWTVHLMNPEVLKPLMLIMLGAVAIY 118


>gi|170756028|ref|YP_001782499.1| hypothetical protein CLD_1680 [Clostridium botulinum B1 str. Okra]
 gi|169121240|gb|ACA45076.1| putative membrane protein [Clostridium botulinum B1 str. Okra]
          Length = 250

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 100/264 (37%), Gaps = 27/264 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L+  A FL+  +  + G GGGL+ +P     + + G+      H+A+GT+     
Sbjct: 1   MFTILLLCFAGFLAAIIDAIAG-GGGLITIPA----YLMAGVPP----HMALGTNKLCAT 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S+ S     + G IN+K+ K       I  V+    +  +D + LN    I  +++ +
Sbjct: 52  CSSLTSCFNFAQSGKINLKLFKILAPFSLIGAVLGVNAVMGIDANCLNIIVLILLVIVAL 111

Query: 140 LMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIY 193
             L    +  +  F      +  +        GF +G  G G G      L+  +     
Sbjct: 112 FSLFSKNVGLKNNFHGLNKKNTLLGIFLSFSLGFYTGFFGPGTGAFMMIGLIGVFKFDFV 171

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+  S  ++ +    +L++  +               +N    + +    I+   L TK
Sbjct: 172 GASGNSKSLTTISNMASLILFAFHRQ------------INYKLAIPVSLAMIIGAKLGTK 219

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           ++   G K +   F+ I    +  
Sbjct: 220 IALNKGSKVIKPVFTTISILIAIK 243


>gi|56708470|ref|YP_170366.1| hypothetical protein FTT_1423c [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670941|ref|YP_667498.1| hypothetical protein FTF1423c [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224457627|ref|ZP_03666100.1| hypothetical protein FtultM_08289 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254371093|ref|ZP_04987095.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254875314|ref|ZP_05248024.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56604962|emb|CAG46056.1| conservered hypothetical membrane protein [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110321274|emb|CAL09439.1| conservered hypothetical membrane protein [Francisella tularensis
           subsp. tularensis FSC198]
 gi|151569333|gb|EDN34987.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254841313|gb|EET19749.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282159671|gb|ADA79062.1| conservered hypothetical membrane protein [Francisella tularensis
           subsp. tularensis NE061598]
          Length = 249

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 101/263 (38%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +I+  F+ G   GL G GG ++ VP+L+           +  H A+  SL V+  T++
Sbjct: 1   MFLIIFGFICGIALGLTGGGGSILAVPLLTY-------GVGLDFHSAVTISLLVVGFTAI 53

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + + +   I+   +   I    +   + S +   +    L  +F+I  +L+G   L 
Sbjct: 54  FGLIVNYKQHDIHYIAVAVMICTGVVFAPIGSYISQDLSDKLLMLSFSILMILIGAWSLL 113

Query: 144 RDRLYCERK--------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYK 194
           + ++    +                I G V G L+G  GVGGG      ++F     I +
Sbjct: 114 KAKIMSSSQKSVCKSIGSRCIVALLISGAVVGTLTGFFGVGGGFLIVPALVFITAMPIKR 173

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A  TS  V  +++    +              +    ++     + +  S +   LATK+
Sbjct: 174 AINTSLLVIFVVSISGFIS------------HYDKANMSWYIASMFIVGSAIGMLLATKV 221

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K L   F++++     V
Sbjct: 222 KKSLNDKVLQTIFAIMLVILGVV 244



 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 7/121 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++++  + GTL+G FGVGGG ++VP L           ++ +  A+ TSL VI   S
Sbjct: 134 IVALLISGAVVGTLTGFFGVGGGFLIVPALVFI-------TAMPIKRAINTSLLVIFVVS 186

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +  F+ H     ++  I   +I    I  ++ + +   ++   L   FAI  +++G+++ 
Sbjct: 187 ISGFISHYDKANMSWYIASMFIVGSAIGMLLATKVKKSLNDKVLQTIFAIMLVILGVVIY 246

Query: 143 K 143
            
Sbjct: 247 L 247


>gi|170718497|ref|YP_001783709.1| hypothetical protein HSM_0360 [Haemophilus somnus 2336]
 gi|168826626|gb|ACA31997.1| protein of unknown function DUF81 [Haemophilus somnus 2336]
          Length = 256

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 91/242 (37%), Gaps = 25/242 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  +  + ++   + ++G +  + G GGGL+ +P L            +   +A+GT+  
Sbjct: 3   EMSIQLMLILFFVAMIAGFIDAMAG-GGGLITIPALLM--------TGMSPALALGTNKL 53

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                S  + +   R   ++++     I +  +   + +L I  VD   + K      L+
Sbjct: 54  QACGGSFSASLYFLRKRAVDLRAFLLIIVMTFLGAALGTLSIQSVDAILIKKVLPFLVLI 113

Query: 137 MGILMLKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASI 192
           +G+  L    L  + + P    +   +  G+  GF  G  G G G    L  +   G ++
Sbjct: 114 IGLYFLLTPSLGNKDRQPRISYSLFAFSIGLTVGFYDGFFGPGTGSLLTLACVSLLGFNL 173

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            KATA +  ++      +LL  +                +     L+++    +   L  
Sbjct: 174 AKATAHAKVLNFTSNIASLLFFLLGDQ------------IFWKLGLVMMLGQFIGANLGA 221

Query: 253 KL 254
           K+
Sbjct: 222 KM 223


>gi|194015770|ref|ZP_03054386.1| YdhB [Bacillus pumilus ATCC 7061]
 gi|194013174|gb|EDW22740.1| YdhB [Bacillus pumilus ATCC 7061]
          Length = 246

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 20/209 (9%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            I +H A+GTSL  +A T++     H R G I +K       +  + +   + +   + +
Sbjct: 34  DIPIHTALGTSLAAMAFTTLSGAYSHYREGNIQLKSGLIVGALACVASFAGAKIAPFIPE 93

Query: 124 SFLNKAFAIFCLLMGILMLKR----DRLYCERKFPDNYVK---YIWGMVTGFLSGALGVG 176
             L+   A    L  + M+ +         ++      +     I G+V+G LSG  G+G
Sbjct: 94  GNLHYLTAGMLFLSAVFMMIKLFVLKEEAEQQPLSSRQLLIRGIILGLVSGLLSGMFGIG 153

Query: 177 GG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
                   L++    SI +A  T+  V   I+    +  I  G            +V+  
Sbjct: 154 SAPFIQVGLLILLRLSIRQAVGTTMLVIIPISIGGGIGYITEG------------YVDFI 201

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLT 264
            ++ IL  ++L   +  K + +  K  L 
Sbjct: 202 LLIQILIGTVLGAYIGAKFTRLAPKLLLK 230


>gi|255526852|ref|ZP_05393750.1| protein of unknown function DUF81 [Clostridium carboxidivorans P7]
 gi|296187615|ref|ZP_06856009.1| membrane protein, putative [Clostridium carboxidivorans P7]
 gi|255509473|gb|EET85815.1| protein of unknown function DUF81 [Clostridium carboxidivorans P7]
 gi|296047572|gb|EFG87012.1| membrane protein, putative [Clostridium carboxidivorans P7]
          Length = 278

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 85/258 (32%), Gaps = 48/258 (18%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL+  F        I +  A+G S+  +  TS  + + + +    N+++          
Sbjct: 32  PVLTLFF-------GIDIKYAIGASIVSVIATSSGAAIAYIKDRITNIRVGMFLEIATTT 84

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER------------------ 151
             +  + +   ++  +L   F +  L   + M+K+ +    +                  
Sbjct: 85  GAITGAFLSGMINTKYLYLIFGMVLLYSTVNMIKKSKSELPKNIETHPIAAKLNLNGAYY 144

Query: 152 ----------KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA 200
                          Y  +    V G +SG LG+G GIF  + M LF    +  ++ATS 
Sbjct: 145 DKVLNQQIQYNVTGVYGGFGMMYVAGVISGLLGIGSGIFKVMAMDLFMKLPLKVSSATSN 204

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  + A  +  V +  G     +               +    +    + TK+   +  
Sbjct: 205 FMIGVTAAASAGVYLIRGDIDPKIS------------APVALGVLFGAAIGTKVMQNLKS 252

Query: 261 KYLTIGFSMIMFTTSFVF 278
           K +   F  ++   S   
Sbjct: 253 KTIRKIFIPVVAYVSIEM 270



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           +++G +SGL G+G G+  V         M +   + + V+  TS  +I  T+  S   + 
Sbjct: 167 YVAGVISGLLGIGSGIFKV-------MAMDLFMKLPLKVSSATSNFMIGVTAAASAGVYL 219

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I+ KI       +     + + ++ ++    + K F      + I M+ +
Sbjct: 220 IRGDIDPKISAPVALGVLFGAAIGTKVMQNLKSKTIRKIFIPVVAYVSIEMIIK 273


>gi|332295235|ref|YP_004437158.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
 gi|332178338|gb|AEE14027.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
          Length = 253

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 107/263 (40%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  + +F++ ++  + G G   +++P                +H +M T+L +      
Sbjct: 4   ILAALITFVAKSIMVITGAGAAFILIPAFYAL--------GFDLHQSMSTALLLNVVAMA 55

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   + R G I  K+    I  + IT+ + + +   V +  L   FA+F L    +M+ 
Sbjct: 56  FASYSYSRIGLIKYKLAFPIIIAVLITSPLGAYLSKFVPRETLLLLFALFLLFAASMMIF 115

Query: 144 --RDRLYCERKFPDNYVKYI-----WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
             + +      F  N V+ +      G   GF++G LG+GGG     +++F G     A 
Sbjct: 116 YKQKKNNSGEDFQINKVQMLTIGVPIGAFAGFVAGLLGIGGGNMIIPILIFIGVPARFAA 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL-S 255
           AT++ +    +F   L ++            ++G ++I  +   +  +IL     + L  
Sbjct: 176 ATTSFIVLFSSFGGFLGKL------------AIGGLDIKLLFSTIIAAILGALFGSYLMK 223

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
           Y +  K + +   ++++  +   
Sbjct: 224 YKLSNKTVKVMIGIVLYMVAAKM 246


>gi|329115543|ref|ZP_08244273.1| UPF0721 transmembrane protein [Acetobacter pomorum DM001]
 gi|326695140|gb|EGE46851.1| UPF0721 transmembrane protein [Acetobacter pomorum DM001]
          Length = 265

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 95/255 (37%), Gaps = 24/255 (9%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
           F +     D I  +I ++F++G +  L G GGGLV +P L       GI        A+ 
Sbjct: 6   FFTMQFTFDTILFLISSAFVAGGIDALAG-GGGLVTIPALM----AAGIPPVS----ALA 56

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           T+       +  +F+   R G ++++          +  +  + ++  V+  FL+    +
Sbjct: 57  TNKLQSTIGTSSAFLTFLRAGHVDIRQFVLPAIGAFLGALAGATVVQFVNPIFLSAIVPL 116

Query: 133 FCLLMGILMLKRDRLYCERKF--PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-G 189
             + M    L    L  E +          +     GF  G  G G G F   +++ + G
Sbjct: 117 LLIGMAAYFLLAPPLSGEDRHARLGRMGITLCMTSIGFYDGFFGPGTGSFLTTVLVAFAG 176

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             + +A A +  ++ L     L   I  G  L     W LGF        +   +IL   
Sbjct: 177 LGLVRAIANTKFINLLTNVAGLTAMIVGGKVL-----WMLGF-------GMAGANILGNQ 224

Query: 250 LATKLSYMIGKKYLT 264
           +   L+   G K + 
Sbjct: 225 VGAWLAIRYGGKGIR 239


>gi|228899612|ref|ZP_04063867.1| integral membrane protein [Bacillus thuringiensis IBL 4222]
 gi|228860042|gb|EEN04447.1| integral membrane protein [Bacillus thuringiensis IBL 4222]
          Length = 255

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNVGALLMFMYVG 201



 Score = 35.4 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|160874792|ref|YP_001554108.1| hypothetical protein Sbal195_1675 [Shewanella baltica OS195]
 gi|160860314|gb|ABX48848.1| protein of unknown function DUF81 [Shewanella baltica OS195]
 gi|315267030|gb|ADT93883.1| protein of unknown function DUF81 [Shewanella baltica OS678]
          Length = 256

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 79/209 (37%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  +  +    ++   + ++G +  + G GGGL+ +P L  A         +   VA+GT
Sbjct: 1   MEFELTLQIAAILFAVAMVAGFIDSIAG-GGGLLTIPALMWA--------GLPPAVALGT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  + +   R G +++K +K  +    I   + ++++  VD   L       
Sbjct: 52  NKLQACGGSFFASLYFVRKGLVDLKSVKLALICAFIGAALGTILVQLVDTKVLELMLPFL 111

Query: 134 CLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
            L +G   L   ++  + K          +   +  G   G  G G G  F    +   G
Sbjct: 112 ILAIGCYFLFSKKISEDDKHQVLTPTAFAFTAALGVGLYDGFFGPGTGSFFALAFVSLAG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             + KATA +  ++      +L+     G
Sbjct: 172 FGLAKATAHAKLLNFSTNIASLIFFALGG 200


>gi|317121216|ref|YP_004101219.1| hypothetical protein Tmar_0369 [Thermaerobacter marianensis DSM
           12885]
 gi|315591196|gb|ADU50492.1| protein of unknown function DUF81 [Thermaerobacter marianensis DSM
           12885]
          Length = 296

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 96/265 (36%), Gaps = 25/265 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +   ++  + G  G+  G V    L   + L     S  +H+A         
Sbjct: 1   MHRLLVFALVGLIAQLVDGALGMAYG-VTSSSLLLLYGLAPAAASASVHLAE-------T 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+ +S   H R G ++   ++  +    I     ++++S +    +    A F L++G+
Sbjct: 53  VTTALSGFAHWRLGNLHRPTIRGLVIPGAIGAFTGAVLLSSLPAQRVRPVVAGFLLMLGV 112

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIW--GMVTGFLSGALGVGGGIFTNL-LMLFYGASIY 193
            +L R  L      ++ P   ++Y+   G V G L    G G G      LM+      +
Sbjct: 113 YILVRFALAAVPRAQRPPRVRLRYVVPLGFVAGLLDATGGGGWGPIATPALMVRGNLPPH 172

Query: 194 KATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           +   + +    ++A  A L    + GW            V    V  ++    +  PLA 
Sbjct: 173 QVVGSVSIAEFVVAVSATLGFTLTLGWEA----------VAWAQVAALVAGGAVAAPLAA 222

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
            ++  +  + L +     +   +  
Sbjct: 223 WMARKLPAQVLGVMVGTAVLLVNLR 247


>gi|218463432|ref|ZP_03503523.1| hypothetical conserved membrane protein [Rhizobium etli Kim 5]
          Length = 257

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 80/235 (34%), Gaps = 25/235 (10%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G +  + G GGGL+ VP +  A    GI         +GT+       S  + + + R+G
Sbjct: 33  GFVDAIAG-GGGLITVPAMLIA----GIPPLQT----LGTNKVQSIFGSASATLAYARNG 83

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY---CE 150
            + +        +  +   + + + + V    L     +  L + I    +  L      
Sbjct: 84  HVQLHEQLPMALMAVVGGAIGAALATIVPGQVLQAIMPVLLLAIAIFFAVKPNLNDLDKH 143

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
           R               GF  G  G G G  F    +   G  + KATA +  ++      
Sbjct: 144 RIITPFVFGLTLVPAIGFYDGVFGPGTGSFFMLAFVTLAGFGVLKATAHTKLLNFGSNLG 203

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           AL+V              S G +     L++     L   L ++L+  IG K + 
Sbjct: 204 ALIVFA------------SFGAILWKIGLLMGFCQFLGAQLGSRLAMRIGAKLIK 246



 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 42/113 (37%), Gaps = 13/113 (11%)

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           GF+    G GGG+ T   ML  G    +   T+   S   +  A L    +         
Sbjct: 33  GFVDAIAG-GGGLITVPAMLIAGIPPLQTLGTNKVQSIFGSASATLAYARN--------- 82

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              G V +   L +  ++++   +   L+ ++  + L     +++   +  FA
Sbjct: 83  ---GHVQLHEQLPMALMAVVGGAIGAALATIVPGQVLQAIMPVLLLAIAIFFA 132


>gi|114048013|ref|YP_738563.1| hypothetical protein Shewmr7_2521 [Shewanella sp. MR-7]
 gi|113889455|gb|ABI43506.1| protein of unknown function DUF81 [Shewanella sp. MR-7]
          Length = 256

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 78/209 (37%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  +  +    L+   + ++G +  + G GGGL+ +P L  A         +   VA+GT
Sbjct: 1   MEFELTLQIAALLFGVAMVAGFIDSIAG-GGGLLTIPALMWA--------GLPPAVALGT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  + +   R G +++K +K  +        + ++++  VD   L       
Sbjct: 52  NKLQACGGSFFASLYFVRKGLVDLKAVKLSLICAFAGAALGTILVQLVDAKVLELVLPFL 111

Query: 134 CLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
            L +G   L   ++  + +          +   +  G   G  G G G  F    +   G
Sbjct: 112 ILAIGCYFLFSKKISEDDRHQVLTPTVFAFTAALGVGLYDGFFGPGTGSFFALAFVTLAG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             + KATA +  ++      +L+     G
Sbjct: 172 FGLAKATAHAKVLNFSTNIASLIFFTLGG 200


>gi|325134898|gb|EGC57531.1| putative membrane protein [Neisseria meningitidis M13399]
          Length = 262

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 92/261 (35%), Gaps = 26/261 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  + + + ++G +  + G GGGL+ +P L     L GI        A+ T+    A  
Sbjct: 6   IILALGLVAMIAGFIDAIAG-GGGLITLPALL----LAGIPPVS----AIATNKLQAAAA 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  + +   R G I+ K             VV +L +S V K  L     I  + + +  
Sbjct: 57  TFSATVSFARKGLIDWKKGLPIAAASFAGGVVGALSVSLVSKDILLAVVPILLIFVALYF 116

Query: 142 LKRDRLYCERKFPDNYVKYIWGM----VTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
           +   +L   ++       +++G+    + GF  G  G G G  F    ++  G  +  A 
Sbjct: 117 VFSPKLDGSKEGKARISFFLFGLTVAPLLGFYDGVFGPGVGSFFLIAFIVLLGCKLLNAM 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           + +   +      +L V +  G             +       +   + +   L  + + 
Sbjct: 177 SYTKLANVACNLGSLSVFLLHGS------------IIFPIAATMAVGAFVGANLGARFAV 224

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G K +     +I  + +  
Sbjct: 225 RFGSKLIKPLLIVISISMAVK 245


>gi|312130508|ref|YP_003997848.1| hypothetical protein Lbys_1788 [Leadbetterella byssophila DSM
           17132]
 gi|311907054|gb|ADQ17495.1| protein of unknown function DUF81 [Leadbetterella byssophila DSM
           17132]
          Length = 298

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 78/201 (38%), Gaps = 14/201 (6%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD--KSFLNKAFAIFCLL 136
             TS +S + H   G +N K+ +  +    I  +  + ++S ++     +    A + L 
Sbjct: 101 IFTSGVSGLSHLTFGNVNKKLFRHLLLPGVIGAITGAYIVSSLEDYNYIIKPFVAAYTLY 160

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           +GI +L +     ++K P   +  + G   GFL    G G G   +  ++  G S     
Sbjct: 161 LGIRILSKVGAKMKKKRPIKRLGLLAGAG-GFLDSIGGGGWGPIVSSTLIANGRSPVYTI 219

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            +       ++F + L  I+            +GF +   +L ++   ++  P+A  +  
Sbjct: 220 GSVNLTEFFVSFASSLTFIFV-----------MGFGHWQIILGLILGGVIAAPIAAFMVR 268

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            I  K + I    ++   S  
Sbjct: 269 KIPVKPMFIFVGTVIIIISLR 289


>gi|300780340|ref|ZP_07090196.1| conserved membrane protein YtnM [Corynebacterium genitalium ATCC
           33030]
 gi|300534450|gb|EFK55509.1| conserved membrane protein YtnM [Corynebacterium genitalium ATCC
           33030]
          Length = 320

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 83/247 (33%), Gaps = 21/247 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + LI +A      + G  G+G G+    +L     L     S  +H A          T+
Sbjct: 7   LILIAIAGLAGQLVDGGLGMGFGVTSTTILVMLAGLGPAQASAVVHTAE-------LGTT 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++S + H + G ++ +++        +   V + ++S++         ++    +GI ++
Sbjct: 60  LVSGISHWKFGNVDWRVVAAIGIPGSVGAFVGATVLSNLSTESAKPIMSLILAAIGINLV 119

Query: 143 KR-----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS-IYKAT 196
            R      R                G+  GF+    G G G  T   +L  G S   +  
Sbjct: 120 YRFSRGLIRRQVVETPHSKPFLGFLGLFGGFVDATGGGGWGPVTTSTLLSAGRSEPRRIV 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T       +   A    +   W             ++ AV  +L   ++  PLA  L  
Sbjct: 180 GTVNTAEFFVTAAATAGFVLGMWDDLVT--------HLSAVGALLLGGVIAAPLAAWLVT 231

Query: 257 MIGKKYL 263
            +    L
Sbjct: 232 RLNPILL 238


>gi|113461346|ref|YP_719415.1| permease [Haemophilus somnus 129PT]
 gi|112823389|gb|ABI25478.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 257

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 101/270 (37%), Gaps = 25/270 (9%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  +  +  + ++ + + ++G +  + G GGGL+ +P L            +   +A+GT
Sbjct: 1   MIVEITLQLMLILFLVAMIAGFIDAMAG-GGGLITIPALLM--------TGMSPALALGT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  + +   R   ++++     I +  +   + +L I  VD   + K     
Sbjct: 52  NKLQACGGSFSASLYFLRKRAVDLRAFLLIIVMTFLGAALGTLSIQSVDAILIKKVLPFL 111

Query: 134 CLLMGILMLKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYG 189
            L++G+  L    L  + + P    +   +  G+  GF  G  G G G    L  +   G
Sbjct: 112 VLIIGLYFLLTPSLGNKDRQPRISYSLFAFSIGLTVGFYDGFFGPGTGSLLTLACVSLLG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
            ++ KATA +  ++      +LL  +                +     L+++    +   
Sbjct: 172 FNLAKATAHAKVLNFTSNIASLLFFLLGDQ------------IFWKLGLVMMLGQFIGAN 219

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           L  K+    GK  +     ++ F  +   A
Sbjct: 220 LGAKMVLTKGKTLIRPMVVLMSFIMTVKMA 249


>gi|67924775|ref|ZP_00518176.1| Protein of unknown function DUF81 [Crocosphaera watsonii WH 8501]
 gi|67853370|gb|EAM48728.1| Protein of unknown function DUF81 [Crocosphaera watsonii WH 8501]
          Length = 265

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +     +G ++GLFG+GGG++MVP+               +  A+ TSLGVI  T++ + 
Sbjct: 147 LTTGGTAGFIAGLFGLGGGVIMVPLQVILL-------GENIKAAIQTSLGVIVITAIFAC 199

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             H   G + +               +++  +  + ++ +   F  F  L+   M  +
Sbjct: 200 GSHAMSGNVLLAEGICLGIGGLFGVQLSTRFLPKLPENMVIFLFRGFMGLLAGYMFVK 257



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 61/162 (37%), Gaps = 13/162 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ TS   I  T++    ++   G + +K +        +T  +  L+ + +    L   
Sbjct: 45  AIATSSLAILMTAMFGSFQNWSLGHLQLKKVIYLAIPAGLTAQLGVLVANKIAPYLLLAG 104

Query: 130 FAIFCLLMGILMLKRD------------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
           F +  LL   L+  R             +   +        +   G   GF++G  G+GG
Sbjct: 105 FGLLLLLNVTLISLRKSLAHKQHPNSAPKPTTQSSVQQTTARLTTGGTAGFIAGLFGLGG 164

Query: 178 GIFTNLL-MLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           G+    L ++  G +I  A  TS GV  + A  A      SG
Sbjct: 165 GVIMVPLQVILLGENIKAAIQTSLGVIVITAIFACGSHAMSG 206


>gi|269122457|ref|YP_003310634.1| hypothetical protein Sterm_3869 [Sebaldella termitidis ATCC 33386]
 gi|268616335|gb|ACZ10703.1| protein of unknown function DUF81 [Sebaldella termitidis ATCC
           33386]
          Length = 277

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 89/258 (34%), Gaps = 48/258 (18%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L+  FQ       + +  A+G S+  +  TS  + + + +    N++I         +
Sbjct: 32  PALTLMFQ-------VDIKHAIGASIIAVIATSSGAAVAYIKDKVTNIRIGMFLEIATTV 84

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD------------------------ 145
             +  + +   ++  +L   F+I       +M+K+                         
Sbjct: 85  GAITGAFIGGFLNPKYLFMIFSILMFYSTFMMIKKAGAELPQNVIQDPLADKLNLHGEYY 144

Query: 146 ----RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA 200
               +   +         +    V G +SG LG+G G F  + M +F    +  +++TS 
Sbjct: 145 DKALKENVKYNVSGVKSGFGVMYVAGIMSGLLGIGSGSFKVMAMDVFMKLPMKVSSSTSN 204

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  + A  +  V +  G     + P   G V +G ++           L  K+   +  
Sbjct: 205 FMIGVTAAASAGVYLERG----DIRPEIAGPVALGVLVG--------ATLGAKIMQHLKS 252

Query: 261 KYLTIGFSMIMFTTSFVF 278
           K + + F  ++   +   
Sbjct: 253 KTIRMIFIPVLLYVAIQM 270



 Score = 56.2 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           +++G +SGL G+G G       S     M +   + M V+  TS  +I  T+  S   + 
Sbjct: 167 YVAGIMSGLLGIGSG-------SFKVMAMDVFMKLPMKVSSSTSNFMIGVTAAASAGVYL 219

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I  +I       + +   + + ++ H+    +   F    L + I M  +
Sbjct: 220 ERGDIRPEIAGPVALGVLVGATLGAKIMQHLKSKTIRMIFIPVLLYVAIQMFMK 273


>gi|327311303|ref|YP_004338200.1| putative permease [Thermoproteus uzoniensis 768-20]
 gi|326947782|gb|AEA12888.1| putative permease [Thermoproteus uzoniensis 768-20]
          Length = 286

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 51/290 (17%), Positives = 90/290 (31%), Gaps = 52/290 (17%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              ++ + S  +G +  L G+GG   +VP+             I +  A G SL     T
Sbjct: 7   LFVVLALTSMAAGFMGSLTGLGGATFLVPIYVLFI-------GIPIQYAAGASLISTIAT 59

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN----KAFAIFCLLM 137
           S  +   + R    N++I           ++V SL  + V    L       F I  L  
Sbjct: 60  SSGAGSAYVRDRVTNVRIGMSLEIATTSGSIVGSLTAAWVYAHNLQHVIYVIFGIVLLGS 119

Query: 138 GILMLKRDRLY-CERKFPDNYVKY---------------------------IWGMVTGFL 169
               + R +    E K PD + K+                           +   V G +
Sbjct: 120 IYTQITRSKFELPEPKPPDRWTKWLQLYGRYYDPALGREVDYHGVRWWLGELIMFVAGVI 179

Query: 170 SGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           SG LG+G G    L M +     +  +T TS  +  + A     +             W 
Sbjct: 180 SGLLGIGSGALKVLGMDWAMNLPMKVSTTTSNFMIGVTAATGSSIY------------WF 227

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            G++            +  + + +K+   +    +   F  I+       
Sbjct: 228 FGYIQPYFAAATAVGVLAGSFVGSKVLLKLRNVTIRYIFMAILAILGIQM 277



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F++G +SGL G+G G + V  +  A        ++ M V+  TS  +I  T+      + 
Sbjct: 174 FVAGVISGLLGIGSGALKVLGMDWAM-------NLPMKVSTTTSNFMIGVTAATGSSIYW 226

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I           +   + V S ++  +    +   F     ++GI ML R
Sbjct: 227 FFGYIQPYFAAATAVGVLAGSFVGSKVLLKLRNVTIRYIFMAILAILGIQMLLR 280


>gi|224476803|ref|YP_002634409.1| hypothetical protein Sca_1319 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421410|emb|CAL28224.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 257

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +I++  FL+  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   LTLIIVIVLFGFLAAFIDSVVG-GGGLISTPALLAV--------GLPPAVALGTNKLASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+ S ++  R G +++KI+      + I     + + S +  S L     I   ++ I
Sbjct: 56  FGSLTSALKFIRSGKVDLKIVGKLFPFIFIAAAGGASLASFLPASVLKPLVIIILTVVMI 115

Query: 140 LMLKRDRLYCERK----FPDNYVKY-IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             L R      R      P   V + I  +  GF  G LG G G F    +L  G     
Sbjct: 116 YTLMRKDWGSIRTYQKLSPGKAVIFTIILLCIGFYDGFLGGGTGSFFLFTLLIVGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A   +  ++      AL++ +  G
Sbjct: 176 AAGNAKVLNFASNVGALVLFMILG 199


>gi|329944408|ref|ZP_08292623.1| hypothetical protein HMPREF9056_00503 [Actinomyces sp. oral taxon
           170 str. F0386]
 gi|328530534|gb|EGF57406.1| hypothetical protein HMPREF9056_00503 [Actinomyces sp. oral taxon
           170 str. F0386]
          Length = 347

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 73/205 (35%), Gaps = 14/205 (6%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T++ S   H R G  + +++        +     + ++SH+         A   +L+G
Sbjct: 52  IGTTLASGASHWRLGNTDPRLVVRLGLPGAVGAFSGATVLSHLSTRAATPVTASLLILLG 111

Query: 139 ILMLKRDRLYC------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
             +L R  L         R      +    GMV GF+    G G G      +L  G + 
Sbjct: 112 AYVLGRFALRPPRGSGSRRSPHGRRLLVPLGMVGGFVDATGGGGWGPVVTTTLLTGGRTA 171

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +    S G S  +   A      +G G  G        +++G VL +L   ++  P+A 
Sbjct: 172 PRTVVGSVGASEFLVTAAASAGFLTGLGTAG--------ISLGIVLALLAGGLVAAPIAA 223

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
            L   +    L      ++ TT+  
Sbjct: 224 WLVSRLPGAVLGTAVGGLILTTNLR 248


>gi|322380278|ref|ZP_08054498.1| integral membrane protein [Helicobacter suis HS5]
 gi|321147315|gb|EFX41995.1| integral membrane protein [Helicobacter suis HS5]
          Length = 276

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 77/217 (35%), Gaps = 30/217 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ V   L+G  +G FG+GGG V+VP    A            + A+G SL  +  +S+
Sbjct: 10  LVLCVVGVLTGITAGFFGIGGGEVVVPAAIFA--------GFSYNHAVGISLAQMLCSSL 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +  + + + G +N++          I  ++   ++  +D   L   F +      I    
Sbjct: 62  VGSVINYKKGLLNLQEGIFAACGGLIGAILGGFLLKVIDDRILMGVFVVVVCYTFIEYAF 121

Query: 144 RDRLYCERK---------------------FPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
             +    +                         + +  + G++TG  S  LG+GGGI   
Sbjct: 122 GRKERHYQNAHFYMHAKKAPLKIPIIHWHLSKTHAILVLAGLITGIFSIPLGMGGGILMV 181

Query: 183 LLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
             + ++      K            +   ++   +SG
Sbjct: 182 PFLGYFLKYDTQKIVPLGLFFVIFSSLSGVISLAHSG 218



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 23/58 (39%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
             V  + G++TG  +G  G+GGG       +F G S   A   S       +    ++
Sbjct: 9   ALVLCVVGVLTGITAGFFGIGGGEVVVPAAIFAGFSYNHAVGISLAQMLCSSLVGSVI 66


>gi|315022808|gb|EFT35832.1| hypothetical protein RAYM_02987 [Riemerella anatipestifer RA-YM]
 gi|325336764|gb|ADZ13038.1| protein of unknown function DUF81 [Riemerella anatipestifer RA-GD]
          Length = 348

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 3/129 (2%)

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           SL +   TS  S +   +   I+ KI   ++ +      + +  I +++  +L    A+F
Sbjct: 46  SLTIGTFTSSASRIVVFKK-HISWKIFFWFVPLSIPAVFLGAFFIKYINPVYLQLVVALF 104

Query: 134 CLLMGILMLKRDRLYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
            +     + K  +   + + P   Y+  I G + GF+SG  G  G +  N   L YG S 
Sbjct: 105 LIANLPQLFKSGKQQKQDEKPYPKYILGIIGFLAGFVSGITGAIG-LLFNRFYLKYGLSK 163

Query: 193 YKATATSAG 201
            +  AT A 
Sbjct: 164 EEIVATRAA 172


>gi|218895998|ref|YP_002444409.1| hypothetical protein BCG9842_B4327 [Bacillus cereus G9842]
 gi|218544655|gb|ACK97049.1| putative membrane protein [Bacillus cereus G9842]
          Length = 255

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFALLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNVGALLMFMYVG 201



 Score = 35.4 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|156973621|ref|YP_001444528.1| hypothetical protein VIBHAR_01324 [Vibrio harveyi ATCC BAA-1116]
 gi|156525215|gb|ABU70301.1| hypothetical protein VIBHAR_01324 [Vibrio harveyi ATCC BAA-1116]
          Length = 263

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 93/261 (35%), Gaps = 26/261 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +   S ++ TL+ L G G GL+  P+L            +   VA+GT         +
Sbjct: 19  LTLFFGSLVANTLASLSGGGAGLLQFPLLIFL--------GLPFSVALGTHKVASVALGL 70

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   H + GTI  KI    I V  I  V+ + +I  +      K      L +GI    
Sbjct: 71  GAASTHLKAGTIKPKIALYLILVGSIGVVIGANLIVQISDDIAEKMLGAMILALGIYSRF 130

Query: 144 RD-----RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
           +       L   R      +  +  M+ G ++G+L  G G+   L ++ ++G    +A A
Sbjct: 131 KKELGQVELAIHRDTLGWIIGGLGLMLIGVVNGSLTAGSGLLVTLFLVRWFGYDYKQAVA 190

Query: 198 -TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T   V         +  + +G             ++   + ++L  S L   L    + 
Sbjct: 191 YTMICVGLFWNGIGGVAVVQAGAP-----------IHWAWLPVLLLSSFLGGSLGAWAAT 239

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
               + + I F ++ F     
Sbjct: 240 RYSNRVIKIAFELLTFAVGIK 260


>gi|54113161|gb|AAV29214.1| NT02FT2019 [synthetic construct]
          Length = 249

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 101/263 (38%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +IV  F+ G   GL G GG ++ VP+L+           +  H A+  SL V+  T++
Sbjct: 1   MFLIVFGFICGIALGLTGGGGSILAVPLLTY-------GVGLDFHSAVTISLLVVGFTAI 53

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + + +   I+   +   I    +   + S +   +    L  +F+I  +L+G   L 
Sbjct: 54  FGLIVNYKQHDIHYIAVAVMICTGVVFAPIGSYISQDLSDKLLMLSFSILMILIGAWSLL 113

Query: 144 RDRLYCERK--------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYK 194
           + ++    +                I G V G L+G  GVGGG      ++F     I +
Sbjct: 114 KAKIMSSSQKSVCKSIGSRCIVALLISGAVVGTLTGFFGVGGGFLIVPALVFITAMPIKR 173

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A  TS  V  +++    +              +    ++     + +  S +   LATK+
Sbjct: 174 AINTSLLVIFVVSISGFIS------------HYDKANMSWYIASMFIVGSAIGMLLATKV 221

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K L   F++++     V
Sbjct: 222 KKSLNDKVLQTIFAIMLVILGVV 244



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 7/121 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++++  + GTL+G FGVGGG ++VP L           ++ +  A+ TSL VI   S
Sbjct: 134 IVALLISGAVVGTLTGFFGVGGGFLIVPALVFI-------TAMPIKRAINTSLLVIFVVS 186

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +  F+ H     ++  I   +I    I  ++ + +   ++   L   FAI  +++G+++ 
Sbjct: 187 ISGFISHYDKANMSWYIASMFIVGSAIGMLLATKVKKSLNDKVLQTIFAIMLVILGVVIY 246

Query: 143 K 143
            
Sbjct: 247 L 247


>gi|70606121|ref|YP_254991.1| hypothetical protein Saci_0282 [Sulfolobus acidocaldarius DSM 639]
 gi|68566769|gb|AAY79698.1| conserved membrane protein [Sulfolobus acidocaldarius DSM 639]
          Length = 285

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 90/277 (32%), Gaps = 52/277 (18%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G +  L G+GG  V+VP+ +           I +  A G SL     TS  S   + +
Sbjct: 16  VAGFVGSLTGLGGATVLVPIYTLFL-------GIPLPYATGASLISTIATSSGSASAYIK 68

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
               N++I         +  +V SL+ + + K  L     I   ++ +  +       + 
Sbjct: 69  DKITNVRIGMSLEIATTLGAIVGSLIANIIYKMHLEDILFIIFGIVILSSVYVQLTKAKD 128

Query: 152 KFPDN--------------------------------YVKYIWGMVTGFLSGALGVGGGI 179
           + P N                                ++  I   V G +SG LG+G G 
Sbjct: 129 ELPKNVKPDWTTKLFKLYGSYYDQALKTEVEYHAIRWWLGEIIMFVAGLISGLLGIGSGA 188

Query: 180 FTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
              + M +     +  +T TS  +  + A  +  +             W  G++      
Sbjct: 189 LKVIGMDWAMNLPLKVSTTTSNFMIGVTAATSSSLY------------WVFGYIEPVLAG 236

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +     ++     TK+   I    +   F  ++    
Sbjct: 237 VTAIGVLIGALAGTKVLVRIRNSRIRFIFIALLIILG 273



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +  F++G +SGL G+G G + V  +  A        ++ + V+  TS  +I  T+ 
Sbjct: 166 WLGEIIMFVAGLISGLLGIGSGALKVIGMDWAM-------NLPLKVSTTTSNFMIGVTAA 218

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S   +   G I   +       + I  +  + ++  +  S +   F    +++G+ M+ 
Sbjct: 219 TSSSLYWVFGYIEPVLAGVTAIGVLIGALAGTKVLVRIRNSRIRFIFIALLIILGVEMII 278

Query: 144 R 144
           R
Sbjct: 279 R 279


>gi|299536606|ref|ZP_07049918.1| hypothetical protein BFZC1_11327 [Lysinibacillus fusiformis ZC1]
 gi|298728090|gb|EFI68653.1| hypothetical protein BFZC1_11327 [Lysinibacillus fusiformis ZC1]
          Length = 246

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 74/246 (30%), Gaps = 26/246 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   +   +  L G GGGL+ +P +            + +H A+G +      ++ 
Sbjct: 4   LLFLLIGIIGNVIGTLVG-GGGLITLPTMMLM--------GVPVHSAIGANKVSNMVSAF 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL---NKAFAIFCLLMGIL 140
            SF    +   +    ++  + V  I   +  L  S +    L         F L+M  +
Sbjct: 55  SSFYTIYQRKELAWNEMRSVLLVSLIGGTLGGLFASFMSSQSLTFIAIILLGFALVMSFM 114

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
                               + G+  GF  G  G G              S  KA   S 
Sbjct: 115 GGADFGDKERFTMNRKNGPILLGV--GFYDGMFGPGSSTLALYTYAHEKISYIKAVGLSR 172

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                +   A +  I +G             +     LI++  S +   +   L+  +  
Sbjct: 173 VGVFAMCSGAAITYIATGK------------IEWPLTLILMIGSTIGAQIGLVLARKVKA 220

Query: 261 KYLTIG 266
             + + 
Sbjct: 221 HQVKLL 226


>gi|326203025|ref|ZP_08192891.1| protein of unknown function DUF81 [Clostridium papyrosolvens DSM
           2782]
 gi|325986671|gb|EGD47501.1| protein of unknown function DUF81 [Clostridium papyrosolvens DSM
           2782]
          Length = 277

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 84/262 (32%), Gaps = 48/262 (18%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++ P L+           I +  A+G S+  +  TS  S + + +    N+++      
Sbjct: 28  IIITPALTLML-------GIDIKYAIGASIISVIATSSGSAIAYLKDRITNVRVGMFLEI 80

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP----------- 154
                 +  + +       +L   F +  L   I M  + +    +              
Sbjct: 81  ATTTGALTGAFLAGLFSTKYLYLIFGLLLLYSAISMFNKRKQELPKDISPSPLAEKLKLS 140

Query: 155 -----------------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKAT 196
                              Y  +      G +SG LG+G GIF  + M  F    +  +T
Sbjct: 141 GAYYDKVLSETVEYNVTGVYGGFGMMYAAGIISGLLGIGSGIFKVMAMDSFMKLPMKVST 200

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           ATS  +  + A  +  + +            S G +N G    +    +L   + TK+  
Sbjct: 201 ATSNFMIGVTAAASAGIYL------------SRGNINPGIAAPVALGVLLGASIGTKVMQ 248

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            +    L + F  ++   S   
Sbjct: 249 RLKSSTLRLVFIPVLLYVSIEM 270



 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G +SGL G+G G+  V  +    +L        M V+  TS  +I  T+  S   +   
Sbjct: 169 AGIISGLLGIGSGIFKVMAMDSFMKL-------PMKVSTATSNFMIGVTAAASAGIYLSR 221

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           G IN  I       + +   + + ++  +  S L   F    L + I M+ +
Sbjct: 222 GNINPGIAAPVALGVLLGASIGTKVMQRLKSSTLRLVFIPVLLYVSIEMIVK 273


>gi|323977471|gb|EGB72557.1| inner membrane protein yfcA [Escherichia coli TW10509]
          Length = 269

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 13/180 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + L+   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLGLLFFVAILAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +  I ++  +L++ +V    L +   I  + +G+  
Sbjct: 65  SISATIYFIRRKVVSLSDQKLNIAMTFIGSMSGALLVQYVQADVLRQILPILVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        + G   GF  G  G   G F  L  +   G ++ KATA
Sbjct: 125 LLMPKLGEEDRQRRMYGLPFALVAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATA 184


>gi|304312826|ref|YP_003812424.1| hypothetical protein HDN1F_32060 [gamma proteobacterium HdN1]
 gi|301798559|emb|CBL46789.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 262

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 57/276 (20%), Positives = 100/276 (36%), Gaps = 41/276 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            + ++   L G   GL GVGGG +M P+L            I    A+GT L   A T  
Sbjct: 4   AVFVLIGGLVGFCVGLTGVGGGSLMTPLLLML--------GIPAQTAIGTDLLYAAVTKA 55

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLM 137
              + H++   IN +++          +  T L + +           L  A     LL 
Sbjct: 56  GGALVHQKKHNINWRVVWTLAAGSIPLSFATVLALKYWFSDVDEYKGVLTAALGFMLLLT 115

Query: 138 GILMLKRDRLYCERKFPDNY-------------VKYIWGMVTGFLSGALGVGGGIF--TN 182
           G  ++ + RL   +     Y             +  + GM+ G L     VG G F    
Sbjct: 116 GFSLVFKRRLKNIQHINVRYQRMCVWLGNHSTSMTLVMGMLLGILVTLSSVGAGAFGAMI 175

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           LLML+   +      T    + L+   A +  +            ++G V++  ++++L 
Sbjct: 176 LLMLYPRFATIGIIGTDVAHAVLLTLVAGIGHM------------TMGHVDMHLLVLLLI 223

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            S+    + T LS  + ++ +       +   SF F
Sbjct: 224 GSLPAIVVGTHLSSSMPERVIQPVLGCTLMALSFKF 259


>gi|254563371|ref|YP_003070466.1| hypothetical protein METDI5038 [Methylobacterium extorquens DM4]
 gi|254270649|emb|CAX26653.1| conserved hypothetical protein; putative membrane protein
           [Methylobacterium extorquens DM4]
          Length = 300

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 15/201 (7%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S + H R G ++  + +  +    I  V  + +++ VD   +    +I+ L MG
Sbjct: 106 IFTTAFSGLSHWRLGNVDGPLFRRLLIPGVIGAVAGATLLTSVDGETIKPFVSIYLLGMG 165

Query: 139 ILMLKR--DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           + +L +    L   R  P   V    G   GF+    G G G      ++  G     + 
Sbjct: 166 LYVLSKAFRTLKANRAPPRAVVPLALGG--GFVDAVGGGGWGPVVTATLVGGGQDPRTSI 223

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            +       +A  + L     G           G  +   +  ++   +   P+A  L  
Sbjct: 224 GSVNAAEFFVAVASGLSFTLLG-----------GLTHWTTIAGLVVGGLFAAPIAALLVR 272

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
           +I  + L +   +++ + S V
Sbjct: 273 VIPARVLMVVVGLLIASLSLV 293


>gi|269120337|ref|YP_003308514.1| hypothetical protein Sterm_1725 [Sebaldella termitidis ATCC 33386]
 gi|268614215|gb|ACZ08583.1| protein of unknown function DUF81 [Sebaldella termitidis ATCC
           33386]
          Length = 242

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 90/206 (43%), Gaps = 15/206 (7%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A   S   +   +V+S  ++ +   I+ +       ++   + + +  I++V +SF+N  
Sbjct: 39  AAALSTFTVFIMAVISVYKYNKSKKIDFRTGIKAGLLIVPGSYIGTFAIAYVAESFINFT 98

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-Y 188
           +     ++  LM  +++++      + + K I  +V GF +G LG+GGG F   L++F +
Sbjct: 99  YLFVLFILICLMFFKEKIHKIE--INYFFKLIISLVIGFCAGILGIGGGPFLIPLLMFVF 156

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
              I K   TS  +  + +  +L+                 G ++    L +   +I+ +
Sbjct: 157 HTEIKKIPGTSVFIVFISSLFSLVQHAAD------------GNIDYIKALPLAIAAIIGS 204

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTT 274
            + T+L+     K +   +++IM   
Sbjct: 205 VIGTRLNRKTDGKTVINLYNIIMILL 230



 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 50/113 (44%), Gaps = 7/113 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++ S + G  +G+ G+GGG  ++P+L   F          +    GTS+ ++  +S+ S 
Sbjct: 127 LIISLVIGFCAGILGIGGGPFLIPLLMFVFH-------TEIKKIPGTSVFIVFISSLFSL 179

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           ++H   G I+            I +V+ + +    D   +   + I  +L+ +
Sbjct: 180 VQHAADGNIDYIKALPLAIAAIIGSVIGTRLNRKTDGKTVINLYNIIMILLFL 232


>gi|284989830|ref|YP_003408384.1| hypothetical protein Gobs_1272 [Geodermatophilus obscurus DSM
           43160]
 gi|284063075|gb|ADB74013.1| protein of unknown function DUF81 [Geodermatophilus obscurus DSM
           43160]
          Length = 333

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 79/214 (36%), Gaps = 15/214 (7%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A  T       TS+MS + H + G ++ K++        +   + + ++S++        
Sbjct: 43  ASATVHFAEIGTSLMSGLAHWKFGNVDWKVVAKVGVPGAVGAFIGANVLSNLSTEVAAPV 102

Query: 130 FAIFCLLMGILMLKRDRLY-CERKFPDNYVK----YIWGMVTGFLSGALGVGGGIFTNLL 184
            ++  + +GI +L R  L   +R+     V+       G+V GF+    G G G      
Sbjct: 103 MSLILVSLGIYLLVRFTLRGIDRRHLGKPVRKRFLGPLGLVAGFVDATGGGGWGPVGTPA 162

Query: 185 MLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +L  G     K   +      LIA  A L  + +         W+LG         +L  
Sbjct: 163 LLASGRMEPRKVIGSIDTSEFLIAVAASLGFLVALGSQGVDATWALG---------LLAG 213

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            ++  PLA  L   +  + L      ++  T+  
Sbjct: 214 GLVAAPLAAWLVRHVPPRMLGSLVGGMIVLTNTR 247


>gi|111223643|ref|YP_714437.1| hypothetical protein FRAAL4244 [Frankia alni ACN14a]
 gi|111151175|emb|CAJ62886.1| hypothetical integral membrane protein [Frankia alni ACN14a]
          Length = 301

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 87/285 (30%), Gaps = 71/285 (24%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
             +VP+L+ AF L        + +A+G S+  +   S  +   +   G  N+++      
Sbjct: 30  TFVVPILTLAFGLD-------VRLAIGASVISVVAGSAAASPRYLDEGFANLRVAVTLEV 82

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD---------- 155
                 V  +L+  H+    L   F +      + ML+  +       PD          
Sbjct: 83  ATVSGAVAGALLAGHLGARTLYTVFGVVLAFSAVQMLRNRQDRAGAAVPDDRIADALSLH 142

Query: 156 --------------------NYVKYIWGMVT---------------------GFLSGALG 174
                                  +   G V                      G +SG LG
Sbjct: 143 GTGTGTGATSTSTGTSSGSGAGTRTAAGTVVRDVRPYRVTRTATGLTMMTAAGAVSGLLG 202

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G      M L     +  +TATS  +  +    + +V +  G  +  L         
Sbjct: 203 IGSGAMKVPAMDLAMRLPLKVSTATSNLMIGVTGAASAVVYLQRGDVVPAL--------- 253

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 +   +++   L ++L  ++    L + F +++   S   
Sbjct: 254 ---AGAVALGTVVGAHLGSRLLAVVPVGALRVIFLVVLLVISVQM 295



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 7/112 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G +SGL G+G G + VP +  A +L        + V+  TS  +I  T   S + + + 
Sbjct: 194 AGAVSGLLGIGSGAMKVPAMDLAMRL-------PLKVSTATSNLMIGVTGAASAVVYLQR 246

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           G +   +         +   + S +++ V    L   F +  L++ + ML R
Sbjct: 247 GDVVPALAGAVALGTVVGAHLGSRLLAVVPVGALRVIFLVVLLVISVQMLLR 298


>gi|85715859|ref|ZP_01046837.1| possible permease [Nitrobacter sp. Nb-311A]
 gi|85697266|gb|EAQ35146.1| possible permease [Nitrobacter sp. Nb-311A]
          Length = 244

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 66/180 (36%), Gaps = 15/180 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L      +G+      HVA+GTS   +A +++ S + H R G +       +     
Sbjct: 15  VPLLVYV---VGVPS---THVAIGTSAVAVALSALSSLITHARAGNVRWPCALVFAACGM 68

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP--------DNYVKY 160
           +   + S +    D  +L   F +  +++ +LML+      ++  P              
Sbjct: 69  VGAGLGSTIGKSFDGQWLLFLFGLLMIVIALLMLREPHDQIKKFVPLTKDSMTAVAPRLA 128

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           ++G   G L+G  G+GGG      ++      +  A  +S                 SG 
Sbjct: 129 VFGSGAGLLAGFFGIGGGFLVVPGLVAGARLPLLAAIGSSLVSVFAFGLTTAASYALSGL 188


>gi|329113934|ref|ZP_08242701.1| Hypothetical protein APO_0708 [Acetobacter pomorum DM001]
 gi|326696681|gb|EGE48355.1| Hypothetical protein APO_0708 [Acetobacter pomorum DM001]
          Length = 261

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 56/266 (21%), Positives = 103/266 (38%), Gaps = 25/266 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V ++ L +++  L G   GL G GG ++ VP++     +         HVA+GTS   +A
Sbjct: 6   VPHLLLELMSGVLVGFTLGLIGGGGSILAVPLMVYLVGVKNP------HVAIGTSALAVA 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +++   +H R+ T+  +    +         + + +   VD   L   FA+  + +GI
Sbjct: 60  INALVGLAQHARNHTVKWRCAGIFASCGVAGAFIGAAIGKTVDGKKLLLFFALLMIGVGI 119

Query: 140 LMLKRDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYK 194
           LML+               +      +G+ TG LSG  G+GGG      ++   G  I  
Sbjct: 120 LMLRGRHNIGCPGASCNRHNAPKVMGYGLGTGLLSGFFGIGGGFLIVPGLIASTGMPILN 179

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A  TS    +   F   L  + S            G+++     + +    +     T  
Sbjct: 180 AVGTSLVAVSAFGFSTALSYMLS------------GYIDWQLAALFILGGAIGCLFGTHT 227

Query: 255 SYMI--GKKYLTIGFSMIMFTTSFVF 278
           +  +     +LT  F+ I+F  +   
Sbjct: 228 ARRMAKSSSHLTTLFACIIFIVAVYM 253



 Score = 43.5 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 9/115 (7%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
              +G LSG FG+GGG ++VP L            + +  A+GTSL  ++     + + +
Sbjct: 147 GLGTGLLSGFFGIGGGFLIVPGLIA-------STGMPILNAVGTSLVAVSAFGFSTALSY 199

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHV--DKSFLNKAFAIFCLLMGILML 142
              G I+ ++   +I    I  +  +     +    S L   FA    ++ + M+
Sbjct: 200 MLSGYIDWQLAALFILGGAIGCLFGTHTARRMAKSSSHLTTLFACIIFIVAVYMI 254


>gi|260887562|ref|ZP_05898825.1| putative membrane protein [Selenomonas sputigena ATCC 35185]
 gi|330837937|ref|YP_004412517.1| protein of unknown function DUF81 [Selenomonas sputigena ATCC
           35185]
 gi|260862737|gb|EEX77237.1| putative membrane protein [Selenomonas sputigena ATCC 35185]
 gi|329745701|gb|AEB99057.1| protein of unknown function DUF81 [Selenomonas sputigena ATCC
           35185]
          Length = 252

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 81/221 (36%), Gaps = 25/221 (11%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            L+ +   + +H A+G +L  +  T +   + H R G + +K          +  ++ + 
Sbjct: 26  TLLTVGFGVPIHTALGVALASMLFTMLSGAVSHFREGEVVVKTGAVLGAGGVLGALLGAE 85

Query: 117 MISHVDKSFLNKAFAIFCLLMGILM--------LKRDRLYCERKFPDNYVKYIW----GM 164
           + + +    L    A+  LL    +        L     +   +        ++    G 
Sbjct: 86  VSNVMPSEELGFLTALMLLLSAFTLYMKVYRADLLDRIFHVRGELLAGRKLVVYGLTLGF 145

Query: 165 VTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           V GFLSGA G+G   F  L +L  +G  + ++  T   V   I+    L  + +G     
Sbjct: 146 VNGFLSGAFGIGAAAFIQLTLLCVFGVPLLQSIGTCMMVILPISAAGGLGYMMNGR---- 201

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
                   +++   +  L   ++   +  K +++  +  L 
Sbjct: 202 --------LDLAIFVQTLFGLMIGAFVGAKCTHLAPRPLLK 234



 Score = 43.1 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 7/122 (5%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +   +   F++G LSG FG+G    +   L   F        + +  ++GT + VI P 
Sbjct: 136 LVVYGLTLGFVNGFLSGAFGIGAAAFIQLTLLCVF-------GVPLLQSIGTCMMVILPI 188

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S    + +  +G +++ I    +F L I   V +       +  L  A      + G +M
Sbjct: 189 SAAGGLGYMMNGRLDLAIFVQTLFGLMIGAFVGAKCTHLAPRPLLKAAIVGMPTIGGFIM 248

Query: 142 LK 143
           L 
Sbjct: 249 LF 250


>gi|157374724|ref|YP_001473324.1| permease [Shewanella sediminis HAW-EB3]
 gi|157317098|gb|ABV36196.1| permease with 5 transmembrane domains [Shewanella sediminis
           HAW-EB3]
          Length = 259

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 79/209 (37%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           ++ +   + I L+   + L+G +  + G GGGL+ +P L  A         +    A+ T
Sbjct: 1   MALELSFELITLLFAVAVLAGFIDSIAG-GGGLITIPALMWA--------GLPPTAALAT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  + +   R G + +  +K  I    I + + ++ +  +D +FL       
Sbjct: 52  NKLQACGGSFFASLYFVRKGMVKLGEMKLAILCAFIGSALGTIAVQQIDTAFLEVLLPFL 111

Query: 134 CLLMGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
            L +G   L   ++  E   R        +   +  G   G  G G G  F    +   G
Sbjct: 112 MLAIGAYFLFSKKICEEDRHRVMTPTLFAFTAALAVGLYDGFFGPGTGSFFALAFVSLAG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             + KATA +  ++      +L+     G
Sbjct: 172 FGLAKATAHAKVLNFSTNIASLIFFAIGG 200


>gi|148380820|ref|YP_001255361.1| hypothetical protein CBO2862 [Clostridium botulinum A str. ATCC
           3502]
 gi|153931952|ref|YP_001385127.1| hypothetical protein CLB_2828 [Clostridium botulinum A str. ATCC
           19397]
 gi|153934926|ref|YP_001388596.1| hypothetical protein CLC_2761 [Clostridium botulinum A str. Hall]
 gi|148290304|emb|CAL84428.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502]
 gi|152927996|gb|ABS33496.1| putative membrane protein [Clostridium botulinum A str. ATCC 19397]
 gi|152930840|gb|ABS36339.1| putative membrane protein [Clostridium botulinum A str. Hall]
          Length = 250

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 99/264 (37%), Gaps = 27/264 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L+  A FL+  +  + G GGGL+ +P     + + G+      H+A+GT+     
Sbjct: 1   MFTILLLCFAGFLAAIIDAIAG-GGGLITIPA----YLMAGVPP----HMALGTNKLCAT 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S+ S     + G IN+K+ K       I   +    +  +D + LN    I  +++ +
Sbjct: 52  CSSLTSCFNFAQSGKINLKLFKILAPFSLIGATLGVNAVMGIDANCLNIIVLILLVIVAL 111

Query: 140 LMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIY 193
             L    +  +  F      +  +        GF +G  G G G      L+  +     
Sbjct: 112 FSLFSKNVGLKNNFHGLNKKNTLLGIFLSFSVGFYTGFFGPGTGAFMMIGLIGVFKFDFV 171

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+  S  ++ +    +L++  +               +N    + +    I+   L TK
Sbjct: 172 GASGNSKSLTTISNMASLILFAFHRQ------------INYKLAIPVSLAMIIGAKLGTK 219

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           ++   G K +   F+ I    +  
Sbjct: 220 IALNKGSKVIKPVFTTISILIAIK 243



 Score = 35.4 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I  SF  G  +G FG G G  M+  L   F+   +        A G S  +   +++
Sbjct: 134 LLGIFLSFSVGFYTGFFGPGTGAFMMIGLIGVFKFDFVG-------ASGNSKSLTTISNM 186

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S +    H  IN K+       + I   + + +  +     +   F    +L+ I +L 
Sbjct: 187 ASLILFAFHRQINYKLAIPVSLAMIIGAKLGTKIALNKGSKVIKPVFTTISILIAIKVLY 246

Query: 144 R 144
           +
Sbjct: 247 Q 247


>gi|329900648|ref|ZP_08272540.1| hypothetical protein IMCC9480_1353 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549424|gb|EGF33988.1| hypothetical protein IMCC9480_1353 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 299

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 97/273 (35%), Gaps = 26/273 (9%)

Query: 9   SLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMH 68
           S M+F      +D    + VA+F +G +  + G GGGL+ +P L   F       +I   
Sbjct: 36  SRMLFGGIGFKMDEFAFLYVAAFFAGFVDAVVG-GGGLIQLPALFSVF------PNIAPA 88

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
             +GT+       +  + +   R   I             +     +  ++ +   F+ K
Sbjct: 89  TLLGTNKLSGFWGTGAAAISFARRVKIEWSAAVPAAVAAFVFAFAGAYTVTRIPPDFIRK 148

Query: 129 AFAIFCLLMGILMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
              +  + +    LKR  +            + ++    G   GF  G  G G G F   
Sbjct: 149 MLPLILIAVAAYTLKRKDMGSTHAPLHKGAKERWLAIAVGGSVGFYDGFFGPGTGSFLVF 208

Query: 184 LMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           L +  +G     A+A +  V+      ALL              W  G +     L +  
Sbjct: 209 LFVRVFGFDFLGASAVAKVVNVACNISALLWF------------WKSGHLLWQIGLAMAV 256

Query: 243 ISILITPLATKLSYMIGKKYLTIGF-SMIMFTT 274
            ++L + + ++++   G  ++   F ++++   
Sbjct: 257 CNVLGSLIGSRMAIKHGSGFVRKLFLAVVLLLI 289



 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 7/117 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I      G   G FG G G  +V +  + F    +  S    V       V    ++
Sbjct: 182 WLAIAVGGSVGFYDGFFGPGTGSFLVFLFVRVFGFDFLGASAVAKV-------VNVACNI 234

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            + +   + G +  +I         + +++ S M       F+ K F    LL+ + 
Sbjct: 235 SALLWFWKSGHLLWQIGLAMAVCNVLGSLIGSRMAIKHGSGFVRKLFLAVVLLLILK 291


>gi|307564766|ref|ZP_07627294.1| putative membrane protein [Prevotella amnii CRIS 21A-A]
 gi|307346488|gb|EFN91797.1| putative membrane protein [Prevotella amnii CRIS 21A-A]
          Length = 277

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 59/286 (20%), Positives = 112/286 (39%), Gaps = 44/286 (15%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++ +  ++I+A++L+G L  L G+GGG+V++PVL+  F        I  H A+G +L  
Sbjct: 2   TILTFTLILILAAYLAGLLGSLTGLGGGVVVIPVLTLGF-------GIDFHYAIGAALIA 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
              TS  S   + R G  N+++         I  V+ + +   +  + +   F I  ++ 
Sbjct: 55  SISTSSGSASAYVREGITNIRLGMFLEIATTIGAVLGAFIAIWMPTNIIAVIFGIVMMMT 114

Query: 138 GIL---------------MLKRDRLY---------CERKFPDNYVKYIWGMVTGFLSGAL 173
            +L               M K+ +LY            +  +    +   +  G LSG L
Sbjct: 115 AVLQQRRKTDHSNVIGSTMAKKLKLYGTYPTKEGIKSYELTNVGGGFSIMVSAGILSGLL 174

Query: 174 GVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G G+   L M          +T TS  +  + A  + +V +  G+   G        +
Sbjct: 175 GIGSGVLKVLAMDTAMKVPFKVSTTTSNFMIGVTAVASAVVYLQRGYIDPG--------I 226

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               ++ +L  S+       KL   +    L   FS+ +   +   
Sbjct: 227 AFPIIIGVLCGSLT----GAKLLKRLNVNILRKVFSIAIVLVALNM 268



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 7/112 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G LSGL G+G G++ V         M     +   V+  TS  +I  T+V S + + + 
Sbjct: 167 AGILSGLLGIGSGVLKV-------LAMDTAMKVPFKVSTTTSNFMIGVTAVASAVVYLQR 219

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           G I+  I    I  +   ++  + ++  ++ + L K F+I  +L+ + M+  
Sbjct: 220 GYIDPGIAFPIIIGVLCGSLTGAKLLKRLNVNILRKVFSIAIVLVALNMIYN 271


>gi|256394552|ref|YP_003116116.1| hypothetical protein Caci_5416 [Catenulispora acidiphila DSM 44928]
 gi|256360778|gb|ACU74275.1| protein of unknown function DUF81 [Catenulispora acidiphila DSM
           44928]
          Length = 254

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 74/253 (29%), Gaps = 18/253 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V   + G      G GG    V      F L G+  +     A+ T +   A  S    
Sbjct: 13  AVIGLVGGIGITAVGPGG----VLPTIGLFALTGLSPAQVAGTAIVTHIATGALGSAAYI 68

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
              +       +          +      +  + V K           L    L+  R R
Sbjct: 69  RSGQLREPDTRRTALILAGSALVGIWAGVIAGTVVSKHTFAVVLGGVLLATAGLVWYRAR 128

Query: 147 LYCERKFPDNYVKYIW--GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
                         +   G+    +SG +G+GG + T  L+   G  + ++ A +   S 
Sbjct: 129 RPQAVLLDRAPTTLVAVIGVAVSAVSGIVGIGGPMLTVPLLAALGLPMLRSLACAQAQSV 188

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           +IA    +  +  G             ++     ++    +    +  K+++ +  + L+
Sbjct: 189 VIATAGTVGYLAHGT------------IDWPLATLVGLPELAGVLVGWKIAHALPTRALS 236

Query: 265 IGFSMIMFTTSFV 277
                 +   +  
Sbjct: 237 NALITTLCVLAVY 249



 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 44/119 (36%), Gaps = 8/119 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ V       +SG+ G+GG ++ VP+L+           + M  ++  +       + 
Sbjct: 141 TLVAVIGVAVSAVSGIVGIGGPMLTVPLLAAL--------GLPMLRSLACAQAQSVVIAT 192

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              + +  HGTI+  +            +V   +   +    L+ A      ++ + ++
Sbjct: 193 AGTVGYLAHGTIDWPLATLVGLPELAGVLVGWKIAHALPTRALSNALITTLCVLAVYLV 251


>gi|218548218|ref|YP_002382009.1| hypothetical protein EFER_0836 [Escherichia fergusonii ATCC 35469]
 gi|218355759|emb|CAQ88372.1| conserved hypothetical protein; putative inner membrane protein
           [Escherichia fergusonii ATCC 35469]
 gi|323967769|gb|EGB63181.1| inner membrane protein yfcA [Escherichia coli M863]
 gi|324112864|gb|EGC06840.1| inner membrane protein yfcA [Escherichia fergusonii B253]
 gi|327252598|gb|EGE64257.1| hypothetical protein ECSTEC7V_2766 [Escherichia coli STEC_7v]
          Length = 269

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 13/180 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + L+   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLGLLFFVAILAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +  I ++  +L++ +V    L +   I  + +G+  
Sbjct: 65  SISATIYFIRRKVVSLSDQKLNIAMTFIGSMSGALLVQYVQADVLRQILPILVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        + G   GF  G  G   G F  L  +   G ++ KATA
Sbjct: 125 LLMPKLGEEDRQRRMYGLPFALVAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATA 184


>gi|254508431|ref|ZP_05120551.1| adenylosuccinate synthetase [Vibrio parahaemolyticus 16]
 gi|219548641|gb|EED25646.1| adenylosuccinate synthetase [Vibrio parahaemolyticus 16]
          Length = 251

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 96/259 (37%), Gaps = 26/259 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   SFL+ TL+ L G G GL+  P+L            +   VA+ T         + +
Sbjct: 9   LFWGSFLANTLASLSGGGAGLLQFPLLIFL--------GLPFSVALATHKVASVALGIGA 60

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H R+ T + ++    + V  I  V+ + ++  +  +       +  L +GI    + 
Sbjct: 61  AFTHIRNRTFDYRVALYVVAVGSIGAVIGANIVLLIPTNIAETLLGVMILAIGIYSRFKK 120

Query: 146 RL-----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATS 199
           +L        R     ++  +  M+ G ++G+L  G G+   + ++ ++G S  +A A +
Sbjct: 121 QLGQQETPIHRTRTGWFIGGLGLMIIGIINGSLTAGSGLLVTIFLVRWFGYSYKQAVALT 180

Query: 200 AGV-SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                        L  + +G             +    + ++L  S     L   L+   
Sbjct: 181 LICVGLFWNGIGGLAIVQAGAP-----------IYWPWLPVLLLGSFAGGSLGAYLTTRY 229

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             +++ + F ++ F     
Sbjct: 230 TNQFIKVCFELLTFAIGIK 248


>gi|296121438|ref|YP_003629216.1| hypothetical protein Plim_1182 [Planctomyces limnophilus DSM 3776]
 gi|296013778|gb|ADG67017.1| protein of unknown function DUF81 [Planctomyces limnophilus DSM
           3776]
          Length = 290

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 97/259 (37%), Gaps = 47/259 (18%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +  VP+L      MG+D       A+  SL  +  TS   F+   R G +++K    +  
Sbjct: 40  IFAVPLLVY---GMGVDP----REAITISLIAVGLTSFTGFLSRWRMGEVDLKTGFLFAL 92

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR--------------------D 145
              I T   + + + + ++ L  AFA   L++   M K+                    D
Sbjct: 93  SGMIGTPAGTWIANLIPETVLMLAFAGLMLIVAERMWKKATKPFVKDSLCQPTGHEELDD 152

Query: 146 RLYCERKFPD--------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKAT 196
           ++ C+R              +  + G++TG ++G  GVGGG      ++ + G  I+KA 
Sbjct: 153 QMTCQRSLSGQLILTSRCAALLLMVGVLTGVIAGLFGVGGGFVIIPALVLFSGMPIHKAV 212

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            TS  V +L++   ++ +  +G             V++   L  +   +         + 
Sbjct: 213 GTSLFVISLVSLSGVISQTVAGRT-----------VDLQITLPFVLGGLAGVVAGQAFAK 261

Query: 257 MIGKKYLTIGFSMIMFTTS 275
            +    L   F + +   +
Sbjct: 262 RLSGPALQKTFVVAIVLVA 280



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 8/123 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+++   L+G ++GLFGVGGG V++P L            + +H A+GTSL VI+  S+
Sbjct: 172 ALLLMVGVLTGVIAGLFGVGGGFVIIPALVLF-------SGMPIHKAVGTSLFVISLVSL 224

Query: 84  MSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              +     G T++++I   ++       V        +    L K F +  +L+  +++
Sbjct: 225 SGVISQTVAGRTVDLQITLPFVLGGLAGVVAGQAFAKRLSGPALQKTFVVAIVLVATMVI 284

Query: 143 KRD 145
            R+
Sbjct: 285 VRN 287


>gi|229056701|ref|ZP_04196105.1| integral membrane protein [Bacillus cereus AH603]
 gi|228720637|gb|EEL72198.1| integral membrane protein [Bacillus cereus AH603]
          Length = 255

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 76/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++I   FL+  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLIILIAFGFLAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
               S +   R G +++K       +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GCATSNIVFYRSGNLDLKSAFKLFPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNY--VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +  +   +  + GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSVSTHKKLSGRHFIIFTFFIFIIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 179 AGNAKLLNLGSNVGALLMFMYVG 201


>gi|254361714|ref|ZP_04977850.1| possible membrane protein [Mannheimia haemolytica PHL213]
 gi|153093240|gb|EDN74246.1| possible membrane protein [Mannheimia haemolytica PHL213]
          Length = 269

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 92/251 (36%), Gaps = 14/251 (5%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF-MEHRRHG 93
             S LFG+GGG++M+P+L   F        + + V    SL ++  ++ ++  + H +  
Sbjct: 18  ITSALFGIGGGVLMMPILHSLF------PELPLQVISACSLTIVIGSATINLCLFHHQQI 71

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
            IN K +  W   + +   +   +      + +   F +  L +    L   +   +   
Sbjct: 72  KINRKNVLIWSLAMMLGVQIGFELSFLFSDNSIIAIFILTLLTLSFKTLF-HKPRVKAIV 130

Query: 154 PDNYVKYIWGMVTGFL-----SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
           P    + +       L           GG I   ++      S  +    +  +  +   
Sbjct: 131 PPKPKEAVSNATMCSLGGLIAGITGIGGGSIMAPIVTQIRSVSPKQVAVYTNYMMVIGGI 190

Query: 209 PALLVRIYSGWGLNG-LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
             L   +   + LN  L  W +G+VN   V  ++  S+     + KL  ++  +  T   
Sbjct: 191 GNLYGYLSRPFVLNSTLATWQIGYVNFAIVGTVVISSLFTVYFSMKLRNILSPELTTKLL 250

Query: 268 SMIMFTTSFVF 278
            +I+FT +   
Sbjct: 251 GVILFTIACYM 261


>gi|315466328|emb|CBY83979.1| DUF81-family membrane protein [Serratia sp. ATCC 39006]
          Length = 271

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 92/275 (33%), Gaps = 40/275 (14%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +V     G + G+ G GGG+  VP L        I     +  A   +L  +A ++ +  
Sbjct: 5   LVLGLCVGAILGITGAGGGIFAVPALV-------IGMGWSLPQAAPVALVAVAGSAALGA 57

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           +E  R   +  +            T   + +  H   + L   FA   +++ + +L+   
Sbjct: 58  VEAWRKNLVRYRAAIVMALAGIPVTAAGAFVAHHTSPTLLTLLFAAVMIVVAVRLLRSQH 117

Query: 147 LYCER---------------------KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
                                           +   +G +TGF++G L VGGG     L+
Sbjct: 118 KKTTTDTQEITTYRVVLDEHTERFVWTMWTWLLFLSFGAITGFMTGLLAVGGGFIIVPLL 177

Query: 186 LFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
             +   +I+   ATS  V AL++   ++  +  G  L            +   +     +
Sbjct: 178 RQFTPLTIHGCIATSLLVIALVSSGGIVTTVMHGASLP-----------LPMTVWFALST 226

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                +  K+   +      + F+ ++   +   A
Sbjct: 227 AAGMFIGRKIGNYLPDHIAQLSFAGLLIIVALGMA 261



 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 8/122 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +    ++G ++GL  VGGG ++VP+L +   L        +H  + TSL VIA  S 
Sbjct: 149 LLFLSFGAITGFMTGLLAVGGGFIIVPLLRQFTPL-------TIHGCIATSLLVIALVSS 201

Query: 84  MSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              +    HG  + + +   +         +   + +++       +FA   +++ + M 
Sbjct: 202 GGIVTTVMHGASLPLPMTVWFALSTAAGMFIGRKIGNYLPDHIAQLSFAGLLIIVALGMA 261

Query: 143 KR 144
             
Sbjct: 262 IN 263


>gi|238920619|ref|YP_002934134.1| hypothetical protein NT01EI_2731 [Edwardsiella ictaluri 93-146]
 gi|238870188|gb|ACR69899.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 266

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 87/238 (36%), Gaps = 25/238 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + ++   +  +G +  + G GGGL+ VP L            +    A+ T+      
Sbjct: 9   ELLGVLFCVALFAGFIDAIAG-GGGLLTVPALLAV--------GLPPAQALATNKLQSVG 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R   +N+   K  I +  +   V +L++  +    L +      + +G+ 
Sbjct: 60  GSFSSSLYFIRRRVVNLAEQKWVILLTFLAAAVGALLVQRLQAEILRQLLPFLVIGVGLY 119

Query: 141 MLKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L    L                + G   GF  G  G G G F  L  ++  G S+ +AT
Sbjct: 120 FLLTPSLGATEGIRRVGMPLFAVLGGASVGFYDGFFGPGAGSFYALGYVMLLGLSLPQAT 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A +  ++      +LL+ I  G        WS+G       L +L    +   +  ++
Sbjct: 180 AHAKVLNFTSNAASLLLFIIGG-----NVVWSVG-------LCMLVGQAIGARVGARM 225


>gi|226310605|ref|YP_002770499.1| hypothetical protein BBR47_10180 [Brevibacillus brevis NBRC 100599]
 gi|226093553|dbj|BAH41995.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
           100599]
          Length = 256

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 95/257 (36%), Gaps = 27/257 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L+ V  F++  +    G GGGL+ +P L      +G+      ++A+GT+     
Sbjct: 5   LSTIVLLAVFGFVAAFIDSTVG-GGGLISLPALL----GLGMPP----YLALGTNKLAGT 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S  S     ++G  + K++     V  I     +  +  V + FL     I   L+ +
Sbjct: 56  ISSATSSYTFIKNGKFDKKLMLILFPVSLIGAYFGAKTVLFVPQEFLKVLVVIMMALIFV 115

Query: 140 LMLKRDRLYCERKFPDNYVKYI-----WGMVTGFLSGALGVGGGIFTNLLM-LFYGASIY 193
             L   R   +  +       +     +  + GF  G  G G G F   LM L +G    
Sbjct: 116 YTLFNKRFGQDSNYKGLTKFTLGIGIPFTFLIGFYDGFFGPGTGSFFVFLMVLLFGYDFV 175

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A      ++      AL V    G  +     +  G       LI+    +L   L  K
Sbjct: 176 IAAGNGRILNLASNISALFVFTMEGKVV-----FMTG-------LIMGIAMLLGANLGAK 223

Query: 254 LSYMIGKKYLTIGFSMI 270
           ++   G +Y+   F ++
Sbjct: 224 MAIKTGVRYVRPLFLVV 240


>gi|197104201|ref|YP_002129578.1| hypothetical protein PHZ_c0735 [Phenylobacterium zucineum HLK1]
 gi|196477621|gb|ACG77149.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 258

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 92/258 (35%), Gaps = 21/258 (8%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + +  L G L  +FG GG ++  P+L     +         HVA+GTS   +A  + M  
Sbjct: 10  VASGALVGLLLTVFGGGGSVLATPLLLYVVGVRD------AHVAIGTSAAAVAVNAAMGL 63

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
               R G +       +       ++  +     V+   L   FA+   L+G  ML   +
Sbjct: 64  SAQARAGRVKWPCALAFGLAGLAGSLAGAHFAKQVEGGTLLVWFALAMALVGGSMLLPKK 123

Query: 147 LYCERKFPDNYVKYI----WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAG 201
              +     N    +     G++TG  +G  G+GGG      LM   G ++  A A+S  
Sbjct: 124 NEGDPAVRLNPRLVVRLAPVGLLTGLAAGFFGIGGGFLIVPGLMAATGMTLAHAAASSLV 183

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              L           SG    GL            V      ++   P+A +L+      
Sbjct: 184 SVTLFGAATSASYAVSGLVDWGL--------FAALVAGGAVGAVGGAPIARRLARRADVA 235

Query: 262 YLTIGFSMIMFTTSFVFA 279
                F++++  T+   A
Sbjct: 236 --RRIFALMVIATAAYVA 251


>gi|229036487|ref|ZP_04189362.1| integral membrane protein [Bacillus cereus AH1271]
 gi|228727826|gb|EEL78927.1| integral membrane protein [Bacillus cereus AH1271]
          Length = 255

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 75/203 (36%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++I   FL+  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLIILIAFGFLAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
               S +   R G +++K     + +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GCATSNIVFYRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYV--KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V     +    GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFTIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +  G
Sbjct: 179 AGNAKLLNLGSNVGALLMFMCVG 201



 Score = 35.8 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 48/120 (40%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +   +G +  F+   +G GGG+     +LF G +   A AT+   S              
Sbjct: 12  ILIAFGFLAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLAST------------M 58

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G   + +  +  G +++ +   ++P++ + + +     +++  + L     +++   +  
Sbjct: 59  GCATSNIVFYRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118


>gi|328952172|ref|YP_004369506.1| protein of unknown function DUF81 [Desulfobacca acetoxidans DSM
           11109]
 gi|328452496|gb|AEB08325.1| protein of unknown function DUF81 [Desulfobacca acetoxidans DSM
           11109]
          Length = 309

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 8/125 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV-MS 85
           ++     G L+ + GVGGG +MVPV+    +       + MHV +GTSL  I  T + ++
Sbjct: 183 LILGVFVGVLAAIMGVGGGFIMVPVMVYLLR-------MPMHVVVGTSLFQILFTCINVT 235

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            M+   + T+++ +    +    +     + +  H+    L    A   L++ + +L   
Sbjct: 236 VMQAITNHTVDLVLAIILLLGSTLGAQFGARLSRHLKADQLKILLASIVLVVMVQILVGL 295

Query: 146 RLYCE 150
                
Sbjct: 296 VWPPH 300



 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/291 (16%), Positives = 92/291 (31%), Gaps = 58/291 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++       G LSGLFGVGGG +M P+L  A         I   VA  +    I   S
Sbjct: 16  ILVLFGLGGAVGFLSGLFGVGGGFLMTPLLIMA--------GIPSTVAAASDSNQIVAAS 67

Query: 83  VMSFMEHRRHGTINMKILKDWI------------FVLPITTVVTSLMISHVDKSFLNKAF 130
                 H R G ++ K+    +             ++ +  +  +  +  +    +    
Sbjct: 68  TSGTYAHYRLGNVDFKMGFLLLLGGVVGGTLGVQLIMVLRAMGNADFVIKITYVIMLGVI 127

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNY--------------------------VKYIWGM 164
             +  +  +  +++         P                             +  I G+
Sbjct: 128 GSYMFVESLQSMRQKVPEARPTGPSRPSAYARLIQALPWQMKFEKSGITLSGFLPLILGV 187

Query: 165 VTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
             G L+  +GVGGG     +M++     ++    TS            +++  +      
Sbjct: 188 FVGVLAAIMGVGGGFIMVPVMVYLLRMPMHVVVGTSLFQILFTCINVTVMQAITNHT--- 244

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                   V++   +I+L  S L      +LS  +    L I  + I+   
Sbjct: 245 --------VDLVLAIILLLGSTLGAQFGARLSRHLKADQLKILLASIVLVV 287


>gi|323706285|ref|ZP_08117851.1| protein of unknown function DUF81 [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323534337|gb|EGB24122.1| protein of unknown function DUF81 [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 277

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 77/244 (31%), Gaps = 41/244 (16%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + +  A+G S+  +  TS  + + + R    N++I            +  + +   +  
Sbjct: 39  GVNIKYAIGASIVSVIATSSGAAVTYVRDKITNIRIGMFLEIATTTGALTGAFIAGLISS 98

Query: 124 SFLNKAFAIFCLLMGILMLKRD----------------------------RLYCERKFPD 155
            +L   F +  L     MLK+                             +   +     
Sbjct: 99  KYLYIIFGLLLLYSAFTMLKKRNEELPVGVVSQPIAKKLKLEGSYYDKVLKKEIKYNVTG 158

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVR 214
               +    + G +SG LG+G GIF  + M LF    +  +TATS  +  + A  +  V 
Sbjct: 159 VNKGFGMMYIAGVISGLLGIGSGIFKVMAMDLFMRLPMKVSTATSNFMIGVTAAASAGVY 218

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +  G     +               +    ++   + TK+   +    +   F  ++   
Sbjct: 219 LVRGDIDPKI------------AGPVALGVLIGATMGTKIMTNMKSTTIRKIFIPVLAYV 266

Query: 275 SFVF 278
           S   
Sbjct: 267 SIEM 270



 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           +++G +SGL G+G G+  V         M +   + M V+  TS  +I  T+  S   + 
Sbjct: 167 YIAGVISGLLGIGSGIFKV-------MAMDLFMRLPMKVSTATSNFMIGVTAAASAGVYL 219

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I+ KI       + I   + + +++++  + + K F      + I ML +
Sbjct: 220 VRGDIDPKIAGPVALGVLIGATMGTKIMTNMKSTTIRKIFIPVLAYVSIEMLLK 273


>gi|218902144|ref|YP_002449978.1| hypothetical protein BCAH820_1026 [Bacillus cereus AH820]
 gi|218539944|gb|ACK92342.1| putative membrane protein [Bacillus cereus AH820]
          Length = 255

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 76/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      AL + +Y G
Sbjct: 179 AGTAKFLNLGSNVGALFMFMYVG 201



 Score = 35.8 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|166367934|ref|YP_001660207.1| hypothetical protein MAE_51930 [Microcystis aeruginosa NIES-843]
 gi|166090307|dbj|BAG05015.1| hypothetical protein MAE_51930 [Microcystis aeruginosa NIES-843]
          Length = 265

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 50/275 (18%), Positives = 97/275 (35%), Gaps = 41/275 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+ + SF  G + GL G+GG  ++ P+L   FQ       +    A+G+ +       V+
Sbjct: 5   LLTIFSFFIGIVVGLTGIGGSSLITPLLIFVFQ-------VPATTAVGSDVVAAGLMKVV 57

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-------SFLNKAFAIFCLLM 137
             + H +  TI ++++K  +      +++  +   +  +        +L     +  +++
Sbjct: 58  GTVRHWQQQTIELEVVKWLVIGSVPGSLLGLVGFRYFQQNSSLNLDQWLPPIIGLVLMIV 117

Query: 138 GI---------LMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
            +         L       +   K             I G V G+L G   +  G    L
Sbjct: 118 TVLAALELLISLFFPDLSPWSWPKLDLTTRSGQIKTTILGAVLGYLVGLTSISSGSLFAL 177

Query: 184 -LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            LM F+     K   T    ++++     +  +             LG V+   VL I  
Sbjct: 178 VLMTFFQLDSRKLVGTDLSQASILLTCTSIGHL------------GLGTVDWNLVLPIWL 225

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             I    +  +LS    K  L I    ++ T S+ 
Sbjct: 226 GGIPGVVVGARLSEYFPKNALKILLYTVLVTVSWR 260



 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 38/115 (33%), Gaps = 7/115 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +   + G L GL  +  G +   VL   FQL          V    S   I  T     +
Sbjct: 155 ILGAVLGYLVGLTSISSGSLFALVLMTFFQL-----DSRKLVGTDLSQASILLTCTS--I 207

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            H   GT++  ++           VV + +  +  K+ L        + +   +L
Sbjct: 208 GHLGLGTVDWNLVLPIWLGGIPGVVVGARLSEYFPKNALKILLYTVLVTVSWRLL 262


>gi|82751302|ref|YP_417043.1| hypothetical protein SAB1573c [Staphylococcus aureus RF122]
 gi|82656833|emb|CAI81262.1| probable membrane protein [Staphylococcus aureus RF122]
          Length = 256

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +II+  F++  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   LTMIIIIILFGFIAAFIDSVVG-GGGLISTPALLAI--------GLPPSVALGTNKLASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+ S ++  R G +++ ++      + + +   + + + V    L     I    + I
Sbjct: 56  FGSLTSTIKFIRSGKVDLYVVAKLFGFVFLASACGAYIATRVPSQILKPLIIIALSSVFI 115

Query: 140 LMLKRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             L +      R      F    +     ++ GF  G +G G G F   ++L +G     
Sbjct: 116 FTLLKKDWGNTRTFTQFTFKKAILFAALFILIGFYDGFVGGGTGSFMLFVLLVFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A   +  ++      AL++ +  G
Sbjct: 176 AAGNAKVLNFASNIGALVLFMVLG 199


>gi|197118881|ref|YP_002139308.1| membrane protein [Geobacter bemidjiensis Bem]
 gi|197088241|gb|ACH39512.1| membrane protein DUF81, putative [Geobacter bemidjiensis Bem]
          Length = 254

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 92/257 (35%), Gaps = 25/257 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y+ ++      +G +  + G GGGL+ VPVL            +    A+GT+    +  
Sbjct: 8   YLPVLFATGAAAGLIDSIAG-GGGLITVPVLLGL--------GLPPQAALGTNKLQGSFG 58

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + +   + GT+N+              ++ S  +  +D  FL +      + +    
Sbjct: 59  SFSAMVHFVQAGTVNLSDAAAGAAWTAAGAILGSYTVQQLDPGFLKQGIPFLLMAILCYT 118

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           +   RL  E    +        + G+  GF  G LG G G F  + LML  G  + K T 
Sbjct: 119 IFTPRLGAEEVHPRLSRGLFYAVAGLALGFYDGFLGPGTGSFWVMALMLGLGFDMRKGTG 178

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +   + +    +L V +  G             V +   +++     +   +  +L   
Sbjct: 179 YTKVFNFVSNIVSLAVFLAGGE------------VLLLPGVVMGVGQAVGARVGARLVIR 226

Query: 258 IGKKYLTIGFSMIMFTT 274
            G +++   F   +   
Sbjct: 227 KGTRFVRPVFICSVLAV 243


>gi|172056387|ref|YP_001812847.1| hypothetical protein Exig_0346 [Exiguobacterium sibiricum 255-15]
 gi|171988908|gb|ACB59830.1| protein of unknown function DUF81 [Exiguobacterium sibiricum
           255-15]
          Length = 288

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 67/203 (33%), Gaps = 20/203 (9%)

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-----DKSFLNKAFAIFCLLM 137
           V     H R    +++          I +   + ++  +       + ++  + +  LL 
Sbjct: 55  VTGTFAHLRQNNFHLRDAVTIGVSGIIGSAAITPVVFWMERHSGADTVISTLYIVLLLLF 114

Query: 138 GILMLKRDRLYCERKFP---DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIY 193
            I  LK  +   +         Y     G   G LS  +GV GG     L++ +    + 
Sbjct: 115 AIQFLKPAKKVVQETPVPHASFYKLVAIGAAAGILSSLMGVSGGFLLTPLLMGWVRFPLK 174

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +A  TS   + LI    +     SG       P +LG       + ++  +++ +PL   
Sbjct: 175 QAIGTSIAAATLIVLGGVTSYFMSGTQA----PLALG-------IALIIGALIGSPLGAS 223

Query: 254 LSYMIGKKYLTIGFSMIMFTTSF 276
              +   +++           + 
Sbjct: 224 FLNLFSSQFVKKSLGSFYAAVAA 246



 Score = 42.0 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 8/120 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++     +G LS L GV GG ++ P+L    +         +  A+GTS+       +  
Sbjct: 139 LVAIGAAAGILSSLMGVSGGFLLTPLLMGWVRF-------PLKQAIGTSIAAATLIVLGG 191

Query: 86  FMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              +   GT   + +    I    I + + +  ++     F+ K+   F   +   +  +
Sbjct: 192 VTSYFMSGTQAPLALGIALIIGALIGSPLGASFLNLFSSQFVKKSLGSFYAAVAASVFLK 251


>gi|267470|sp|P29942|YCB9_PSEDE RecName: Full=UPF0721 transmembrane protein ORF9; AltName:
           Full=ORF9
 gi|94984|pir||I38164 hypothetical protein 9 - Pseudomonas sp
 gi|551929|gb|AAA25785.1| ORF9 [Pseudomonas denitrificans]
          Length = 261

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 93/266 (34%), Gaps = 25/266 (9%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           +D     +  + VA+F++G +  + G GGG++ +P +  A    GI         +GT+ 
Sbjct: 2   QDLAFHLLAFLFVAAFIAGFIDSIAG-GGGMITIPAMLIA----GIPPLQT----LGTNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 S  + + + R G +N+K       +     V+ +L+ + V    L        +
Sbjct: 53  LQGLFGSGSATLSYARRGHVNLKEQLPMALMSAAGAVLGALLATIVPGDVLKAILPFLLI 112

Query: 136 LMGILMLKRDR---LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGAS 191
            + +    +     +    +            + GF  G  G G G F  L  +   G  
Sbjct: 113 AIALYFGLKPNMGDVDQHSRVTPFVFTLTLVPLIGFYDGVFGPGTGSFFMLGFVTLAGFG 172

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           + KATA +  ++      A  V ++             G V     L++     L   + 
Sbjct: 173 VLKATAHTKFLNFGSNVGAFGVFLF------------FGAVLWKVGLLMGLGQFLGAQVG 220

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
           ++ +   G K +     ++    +  
Sbjct: 221 SRYAMAKGAKIIKPLLVIVSIALAIR 246


>gi|228977661|ref|ZP_04138049.1| integral membrane protein [Bacillus thuringiensis Bt407]
 gi|228782049|gb|EEM30239.1| integral membrane protein [Bacillus thuringiensis Bt407]
          Length = 263

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 76/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 16  SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 66

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K     + +  I +++ +  +  ++   L     I    + I 
Sbjct: 67  GSATSNIVFYRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 126

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 127 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 186

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 187 AGNAKFLNLGSNVGALLMFMYVG 209



 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 51/120 (42%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 20  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 75

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   ++P++ + + +     +++  + L     +++   +  
Sbjct: 76  ---------YRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 126


>gi|227876711|ref|ZP_03994820.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
 gi|227842608|gb|EEJ52808.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
          Length = 361

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 7/119 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +    +     G ++G  G+GGG++ VPVL               H A+  SL V+  +S
Sbjct: 3   LIFAALIGVGVGMVAGSLGIGGGMLAVPVLVYLL-------GQDPHAAVAESLVVVLASS 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             +     R G + +     +     +   + + +   +    +  AFA    ++  LM
Sbjct: 56  AAALPSRFRRGQVRLGTGLIFGMCSLVGAGIGTWLNRAISGEVVMLAFAALLAVVSALM 114



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 49/140 (35%), Gaps = 29/140 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V   L+G L   FG+GGG  +VP+L    +         + VA GTS  V++  S
Sbjct: 222 LPMFLVLGTLTGILVSFFGIGGGFAVVPLLVLVMRY-------PIRVAQGTSFIVMSVVS 274

Query: 83  VMSFMEHRRHG----------------------TINMKILKDWIFVLPITTVVTSLMISH 120
           V S +                             ++  +   +     I   + S + + 
Sbjct: 275 VASILTRVLEPVVMAALAGMAALAGGIVPTEPLRVDWLVALAFALCSGIGASIGSPLSNR 334

Query: 121 VDKSFLNKAFAIFCLLMGIL 140
              S L  AF    + + + 
Sbjct: 335 ARASTLTFAFVGLLVAIAVY 354



 Score = 43.5 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 13/120 (10%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
            + G+  G ++G+LG+GGG+    ++++  G   + A A S  V    +  AL  R    
Sbjct: 7   ALIGVGVGMVAGSLGIGGGMLAVPVLVYLLGQDPHAAVAESLVVVLASSAAALPSR---- 62

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                   +  G V +G  LI    S++   + T L+  I  + + + F+ ++   S + 
Sbjct: 63  --------FRRGQVRLGTGLIFGMCSLVGAGIGTWLNRAISGEVVMLAFAALLAVVSALM 114



 Score = 40.8 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 11/132 (8%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G +TG L    G+GGG     L++      I  A  TS  V ++++  ++L R+
Sbjct: 223 PMFLVLGTLTGILVSFFGIGGGFAVVPLLVLVMRYPIRVAQGTSFIVMSVVSVASILTRV 282

Query: 216 Y----------SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
                            G+ P     V+    L     S +   + + LS       LT 
Sbjct: 283 LEPVVMAALAGMAALAGGIVPTEPLRVDWLVALAFALCSGIGASIGSPLSNRARASTLTF 342

Query: 266 GFSMIMFTTSFV 277
            F  ++   +  
Sbjct: 343 AFVGLLVAIAVY 354


>gi|218554882|ref|YP_002387795.1| hypothetical protein ECIAI1_2404 [Escherichia coli IAI1]
 gi|293415620|ref|ZP_06658263.1| hypothetical protein ECDG_02186 [Escherichia coli B185]
 gi|300928499|ref|ZP_07144025.1| putative inner membrane protein [Escherichia coli MS 187-1]
 gi|331653772|ref|ZP_08354773.1| inner membrane protein YfcA [Escherichia coli M718]
 gi|218361650|emb|CAQ99246.1| conserved hypothetical protein; putative inner membrane protein
           [Escherichia coli IAI1]
 gi|291433268|gb|EFF06247.1| hypothetical protein ECDG_02186 [Escherichia coli B185]
 gi|300463494|gb|EFK26987.1| putative inner membrane protein [Escherichia coli MS 187-1]
 gi|323184353|gb|EFZ69729.1| hypothetical protein ECOK1357_2324 [Escherichia coli 1357]
 gi|324117795|gb|EGC11694.1| inner membrane protein yfcA [Escherichia coli E1167]
 gi|331048621|gb|EGI20697.1| inner membrane protein YfcA [Escherichia coli M718]
          Length = 269

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 13/180 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLGVLFFVAMLAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +  I ++  +L++ +V    L +   I  + +G+  
Sbjct: 65  SISATIYFIRRKVVSLSDQKLNIAMTFIGSMSGALLVQYVQADVLRQILPILVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G   G F  L  +   G ++ KATA
Sbjct: 125 LLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATA 184


>gi|228988844|ref|ZP_04148900.1| integral membrane protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228770888|gb|EEM19397.1| integral membrane protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 255

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 76/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      AL + +Y G
Sbjct: 179 AGTAKFLNLGSNVGALFMFMYVG 201



 Score = 35.4 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|223039779|ref|ZP_03610064.1| inner membrane protein YfcA [Campylobacter rectus RM3267]
 gi|222878971|gb|EEF14067.1| inner membrane protein YfcA [Campylobacter rectus RM3267]
          Length = 264

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 92/239 (38%), Gaps = 24/239 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +P +      MG+      HVA+ T+       S  + +   R G IN + +  
Sbjct: 38  GGGLIALPTIM----AMGVPP----HVALATNKLQGTFGSFTAALNFARKGMINFREVFI 89

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER---KFPDNYVK 159
            I    I   V +++I  +   FL        + + I  L   ++  E    +       
Sbjct: 90  GIVFTFIGACVGTVLILFLSAEFLRVIIPFCLIAIFIYTLLMPKVGDEDRAARMNARAFY 149

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
            I+G++ GF  G  G G G F    M+   G ++ KA A +  ++      +L V I  G
Sbjct: 150 VIFGLILGFYDGFFGPGAGSFWTFAMVALIGLNMKKAVAHTKILNFTSNIVSLAVFIADG 209

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             L     W++GF       ++    +L     + +      K++ + F  ++  T   
Sbjct: 210 HML-----WTVGF-------LMGAGQVLGAYFGSNMVMKKDVKFVRVVFLAVVGATILK 256


>gi|168181548|ref|ZP_02616212.1| putative membrane protein [Clostridium botulinum Bf]
 gi|237796320|ref|YP_002863872.1| hypothetical protein CLJ_B3116 [Clostridium botulinum Ba4 str. 657]
 gi|182674990|gb|EDT86951.1| putative membrane protein [Clostridium botulinum Bf]
 gi|229262656|gb|ACQ53689.1| putative membrane protein [Clostridium botulinum Ba4 str. 657]
          Length = 250

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 100/264 (37%), Gaps = 27/264 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L+  A FL+  +  + G GGGL+ +P     + + G+      H+A+GT+     
Sbjct: 1   MFTILLLCFAGFLAAIIDAIAG-GGGLITIPA----YLMAGVPP----HMALGTNKLCAT 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S+ S     + G IN+K+ K       I  ++    +  +D + LN    I  +++ +
Sbjct: 52  CSSLTSCFNFAQSGKINLKLFKILAPFSLIGAILGVNAVMGIDANCLNIIVLILLVIVAL 111

Query: 140 LMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIY 193
             L    +  +  F      +  +        GF +G  G G G      L+  +     
Sbjct: 112 FSLFSKNVGLKNNFHGLNKKNILLGIFLSFSVGFYTGFFGPGTGAFMMIGLIGVFKFDFV 171

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+  S  ++ +    +L++  +               +N    + +    I+   L TK
Sbjct: 172 GASGNSKSLTTISNMASLILFAFHRQ------------INYKLAIPVSLAMIIGAKLGTK 219

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           ++   G K +   F+ I    +  
Sbjct: 220 IALNKGSKVIKPVFTTISILIAIK 243



 Score = 36.6 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 7/122 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L I  SF  G  +G FG G G  M+  L   F+   +        A G S  +   ++
Sbjct: 133 ILLGIFLSFSVGFYTGFFGPGTGAFMMIGLIGVFKFDFVG-------ASGNSKSLTTISN 185

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S +    H  IN K+       + I   + + +  +     +   F    +L+ I +L
Sbjct: 186 MASLILFAFHRQINYKLAIPVSLAMIIGAKLGTKIALNKGSKVIKPVFTTISILIAIKVL 245

Query: 143 KR 144
            +
Sbjct: 246 YQ 247


>gi|209549720|ref|YP_002281637.1| hypothetical protein Rleg2_2127 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209535476|gb|ACI55411.1| protein of unknown function DUF81 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 261

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 84/248 (33%), Gaps = 25/248 (10%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G +  + G GGGL+ VP +  A    GI         +GT+       +  + + + R G
Sbjct: 20  GFVDSIAG-GGGLISVPAMLIA----GIPPLQT----LGTNKVQSIFGAASATLAYARKG 70

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY---CE 150
            + ++       +  +   + + + + V    L     +  L + I    +  L      
Sbjct: 71  HVQLREQLPMALMAVMGGALGAALATIVPGQVLQAIMPVLLLSIAIFFAVKPNLNDVDTH 130

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
           R+              G   G  G G G  F    +   G  + KATA +  ++    F 
Sbjct: 131 RRITPFAFGLTLVPAIGLYDGVFGPGTGSFFMLAFVTLAGFGVLKATAHTKLLNLGSNFG 190

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           AL+V              S G +     L++     L   L ++L+  IG K +     +
Sbjct: 191 ALIVFA------------SFGAILWKIGLLMGICQFLGAQLGSRLAMRIGAKLIKPLLVI 238

Query: 270 IMFTTSFV 277
           +    +  
Sbjct: 239 VCVALAVK 246



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 13/113 (11%)

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           GF+    G GGG+ +   ML  G    +   T+   S   A  A L              
Sbjct: 20  GFVDSIAG-GGGLISVPAMLIAGIPPLQTLGTNKVQSIFGAASATLAYARK--------- 69

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              G V +   L +  ++++   L   L+ ++  + L     +++ + +  FA
Sbjct: 70  ---GHVQLREQLPMALMAVMGGALGAALATIVPGQVLQAIMPVLLLSIAIFFA 119


>gi|21673688|ref|NP_661753.1| hypothetical protein CT0859 [Chlorobium tepidum TLS]
 gi|21646809|gb|AAM72095.1| membrane protein, putative [Chlorobium tepidum TLS]
          Length = 315

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 55/285 (19%), Positives = 105/285 (36%), Gaps = 48/285 (16%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++ ++ V SFL G ++ L GVGGG++ VP++S  F          +    G  L V    
Sbjct: 42  WVLVLFVFSFLLGIVAVLAGVGGGVLFVPIVSGFFPF-------HIDYVRGAGLLVALAG 94

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ +     R G  ++K+      V  I+++  +LM   +    +     I  L +  +M
Sbjct: 95  ALSAGPPLLRKGIADLKLGLPMALVGSISSIAGALMGLAMPAKNVQLLLGIVILGITAIM 154

Query: 142 LKRDRL----------------------------YCERKFPDNYVKYIWGMVTGFLSGAL 173
           LK  +                                 +     V  +   + GF+ G  
Sbjct: 155 LKAGKSGYPEVKEPDALSKMLGISGCYFEEFGQHEVSWQVHRTLVATVLFFIIGFIGGMF 214

Query: 174 GVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G G     +  L  G  +  A ATS  V ++    A  V +++G  L          +
Sbjct: 215 GLGAGFANVPVFNLLMGVPLKVAVATSGLVLSINGSAAAWVYMFNGAVLPI--------I 266

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + AV  +    +L + +  KL   +  + + +    I+  + F 
Sbjct: 267 AVPAVGGM----MLGSKIGAKLLPKVNTRTIRMIVITILALSGFR 307



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F+ G + G+FG+G G   VPV +           + + VA+ TS  V++     +   + 
Sbjct: 205 FIIGFIGGMFGLGAGFANVPVFNLLM-------GVPLKVAVATSGLVLSINGSAAAWVYM 257

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +G +   I    +  + + + + + ++  V+   +         L G   L +
Sbjct: 258 FNGAVLPIIAVPAVGGMMLGSKIGAKLLPKVNTRTIRMIVITILALSGFRSLLK 311


>gi|319653266|ref|ZP_08007368.1| hypothetical protein HMPREF1013_03983 [Bacillus sp. 2_A_57_CT2]
 gi|317395187|gb|EFV75923.1| hypothetical protein HMPREF1013_03983 [Bacillus sp. 2_A_57_CT2]
          Length = 285

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 93/262 (35%), Gaps = 26/262 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +    F++  + G  G+  G+      S    ++G+  +    VA  +       T+
Sbjct: 4   LLTVTFVGFIAQLIDGSLGMAYGVTS----SSLLLMLGMAPA----VASASIHISEVVTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   H + G ++   +   I    +   + +  +S++    +    ++F LL+G+ +L
Sbjct: 56  AASGFFHFKFGNVDRGTVMKLILPGGVGAFIGACFLSNMPGEAVRPFISVFLLLLGVYIL 115

Query: 143 KRDRLYCERKFPDNYVKY------IWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKA 195
            R          +  ++       I G++ GF     G G G  T  ++L     +  K 
Sbjct: 116 FRFLFLNSTPNENKGIQLSNRKAAILGLLGGFADATGGGGWGPITTPVLLAQKDTAPRKV 175

Query: 196 TATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             T      +IA  A    + S GW                 VL ++   +   P+A  L
Sbjct: 176 IGTVDTSEFVIALSATAGFLISLGWKEFD----------WFWVLALMLGGLFAAPIAAWL 225

Query: 255 SYMIGKKYLTIGFSMIMFTTSF 276
             ++    L +    ++  T+ 
Sbjct: 226 VRILPSYLLGVAVGGVIIITNL 247


>gi|229143667|ref|ZP_04272090.1| integral membrane protein [Bacillus cereus BDRD-ST24]
 gi|228639846|gb|EEK96253.1| integral membrane protein [Bacillus cereus BDRD-ST24]
          Length = 255

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +N+K       +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GSATSNIVFYRSGNLNLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      ALL+ +Y G
Sbjct: 179 AGTAKFLNLGSNVGALLMFMYVG 201



 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +N+ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLNLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|298694983|gb|ADI98205.1| probable membrane protein [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 256

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +II+  F++  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   LTMIIIIILFGFIAAFIDSVVG-GGGLISTPALLAI--------GLPPSVALGTNKLASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+ S ++  R G +++ ++      + + +   + + + V    L     I    + I
Sbjct: 56  FGSLTSTIKFIRSGKVDLYVVAKLFGFVFLASACGAYIATMVPSQILKPLIIIALSSVFI 115

Query: 140 LMLKRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             L +      R      F    +     ++ GF  G +G G G F   ++L +G     
Sbjct: 116 FTLLKKDWGNTRTFTQFTFKKAILFAALFILIGFYDGFVGGGTGSFMLFVLLVFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A   +  ++      AL++ +  G
Sbjct: 176 AAGNAKVLNFASNIGALVLFMVLG 199


>gi|269863999|ref|XP_002651419.1| transporter [Enterocytozoon bieneusi H348]
 gi|220064559|gb|EED42637.1| transporter [Enterocytozoon bieneusi H348]
          Length = 256

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 99/275 (36%), Gaps = 29/275 (10%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFG---VGGGLVMVPVLSKAFQLMGIDDSICM 67
           M+      ++ + CL  V     G ++G  G    G   + VPV+            I  
Sbjct: 1   MILCEHLNMMGHECLTGVGLIFLGIITGFVGTNTGGSVFLTVPVMIWL--------GIAP 52

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
             ++ T+      T           G ++  +      +  +  +  + ++  +D + L+
Sbjct: 53  QSSIATARLASVGTMFAGLRHFHNQGKVDYALAFPAAVLGLVGALAGASLLLQIDPALLH 112

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV----TGFLSGALGVGGGIFTNL 183
           K      LL+  L   +       + P + ++ ++G +     G + G  G    + T L
Sbjct: 113 KVIGGLTLLLVALSFIKK--PSSGETPPSAIRRLFGYILFIPVGMIGGLFGGQAKLSTYL 170

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
            ++F+  +I ++  T      +++  +LL+   SG             ++      ++  
Sbjct: 171 FIIFFRKTISESVGTRKVGGLVLSAGSLLIFGVSGI------------IDWQYGCCLIIG 218

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++L      K +   G +++   F++++   +   
Sbjct: 219 TLLGANAGAKFALKKGDQWMEAVFNLVVVALALRM 253


>gi|47564907|ref|ZP_00235951.1| hypothetical protein membrane Spanning protein [Bacillus cereus
           G9241]
 gi|47558280|gb|EAL16604.1| hypothetical protein membrane Spanning protein [Bacillus cereus
           G9241]
          Length = 255

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 75/203 (36%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I ++V +  +  ++   L     I    + I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSALKLFPITFIGSIVGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFALLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      AL + +Y G
Sbjct: 179 AGTAKFLNLGSNVGALFMFMYVG 201



 Score = 35.4 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 51/120 (42%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ + L + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSALKLFPITFIGSIVGAWTVHLMNPEVLKPLMLIMLGAVAIY 118


>gi|322514097|ref|ZP_08067168.1| inner membrane protein YfcA [Actinobacillus ureae ATCC 25976]
 gi|322120114|gb|EFX92085.1| inner membrane protein YfcA [Actinobacillus ureae ATCC 25976]
          Length = 256

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 81/202 (40%), Gaps = 13/202 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D   ++   + ++G +  + G GGGL+ +P L       G+  +    +A+GT+      
Sbjct: 6   DVFAILFSVAMIAGFIDAIAG-GGGLLTIPALLAV----GVPPA----MALGTNKLQACG 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  + +   R   +++K +   I +  I     ++ +  +D + L        L++GI 
Sbjct: 57  GSFSASIYFVRKKAVDVKQIFLLILLTFIGAACGTIFVQTIDVNALQALLPFLVLIIGIY 116

Query: 141 MLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L    +  E   ++       +      GF  G  G   G F  L  +L  G ++ KA 
Sbjct: 117 FLFSPSIGDEDRKQRISLPLFAFTAAAGVGFYDGMFGPATGSFFTLAFILLLGFNLPKAV 176

Query: 197 ATSAGVSALIAFPALLVRIYSG 218
           A +  ++    F +L+  I  G
Sbjct: 177 AHAKVLNFTSNFASLIFFILGG 198


>gi|228913616|ref|ZP_04077244.1| integral membrane protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|301052586|ref|YP_003790797.1| membrane protein [Bacillus anthracis CI]
 gi|228846027|gb|EEM91050.1| integral membrane protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|300374755|gb|ADK03659.1| conserved hypothetical membrane protein [Bacillus cereus biovar
           anthracis str. CI]
          Length = 255

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 75/203 (36%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K       +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSALKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
             T+  ++      AL + +Y G
Sbjct: 179 AGTAKFLNLGSNVGALFMFMYVG 201



 Score = 35.8 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 51/120 (42%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ + L + PI+ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSALKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118


>gi|209694837|ref|YP_002262765.1| membrane protein [Aliivibrio salmonicida LFI1238]
 gi|208008788|emb|CAQ78988.1| membrane protein [Aliivibrio salmonicida LFI1238]
          Length = 260

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 84/214 (39%), Gaps = 15/214 (7%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M ++S D  +  +  +++++F +G +  + G GGGL++VP    +F L G+       VA
Sbjct: 1   MEWISNDITLWILIALMLSAFAAGFIDSVAG-GGGLILVP----SFILAGLPP----QVA 51

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +G    V    ++ +     R+  +    +   I    +   + +  I + D   + K  
Sbjct: 52  LGQEKIVSTLGTIAAIRNFIRNKKVVWAAVTTGIPAGLLGAYIGAEAILYFDPDTIGKII 111

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG-----MVTGFLSGALGVGGGIFTNLLM 185
                +  +L     +     +   N    ++G      V GF  G  G G G F  L +
Sbjct: 112 MGMLPIGIVLSFIPKKAKEVNQSDINPKIILFGVPTAVFVIGFYDGFFGPGTGSFLILAL 171

Query: 186 LF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
            +     +  A+ATS   +      AL+    SG
Sbjct: 172 HYLLRFDLVSASATSKLFNFASNIGALIAFTLSG 205


>gi|17548054|ref|NP_521456.1| hypothetical protein RSc3337 [Ralstonia solanacearum GMI1000]
 gi|17430360|emb|CAD17125.1| putative of unknown function duf81; transmembrane protein
           [Ralstonia solanacearum GMI1000]
          Length = 252

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 103/264 (39%), Gaps = 27/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS-LGVIAPT 81
             L+ VA FL+G +  + G GGGLV +P L  A+       ++     +GT+ L  ++ T
Sbjct: 3   FVLLAVAGFLAGLIDAVAG-GGGLVQIPALFSAY------PNLAPATLIGTNKLASMSGT 55

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  +   + R   I        +    + +++ +  ++H+    L +A     +L+ +  
Sbjct: 56  ATAAAR-YGRTVRIYWGATAPAVVTAFLCSLLGAWALTHIPAEPLRRALPFVLVLLLVYT 114

Query: 142 LKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
           + +  L  E         +  V  + G + GF  G  G G G     + +  +G     A
Sbjct: 115 VAKKDLGAEHAPSLAGWRERGVALLAGAIIGFYDGVFGPGTGSFLMIVFVRVFGYDFLHA 174

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +A++  V+      ALL+              S G V     L++   ++L     + L+
Sbjct: 175 SASTKIVNLATNVAALLLLA------------SKGHVWWQLGLVMAVANVLGNQAGSYLA 222

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G +++   F  ++       A
Sbjct: 223 LKHGSRFVRKMFIAVVLALILKTA 246


>gi|309702638|emb|CBJ01967.1| putative membrane protein [Escherichia coli ETEC H10407]
          Length = 269

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 75/180 (41%), Gaps = 13/180 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L       G+  +     A+ T+       
Sbjct: 14  LLGVLFFVAMLAGFIDSIAG-GGGLLTIPALM----AAGMSPAN----ALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +  + ++  +L++ +V    L +   I  + +G+  
Sbjct: 65  SISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G   G F  L  +   G ++ KATA
Sbjct: 125 LLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATA 184


>gi|40062756|gb|AAR37650.1| membrane protein, putative [uncultured marine bacterium 439]
          Length = 252

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 79/201 (39%), Gaps = 12/201 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +  + V + ++G +  L G GGGL+ VP L     L GI         +GT+    + 
Sbjct: 9   EILTFLFVIAIIAGFIDTLIG-GGGLLAVPALL----LSGIPPIYV----LGTNKFQGSM 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            + ++     R   +N + +K  +    I +++  +++  +D   L+    I  +++ I 
Sbjct: 60  GTGIATFLLFRKKKLNWETIKYLMLASFIGSIIGGVIVHFIDTEILSFVIPIVLVVIAIY 119

Query: 141 MLKRDRLYCERKFPDNYVKY--IWGMVTGFLSGALGVGGGIFTNLL-MLFYGASIYKATA 197
            +   +     K  ++   +        GF  G  G G G F  +  ++     I +AT 
Sbjct: 120 FIISPKPKVITKNSESNKNFEKYAVPTVGFYDGMFGPGAGSFFVMTGVMLKKLEIIQATI 179

Query: 198 TSAGVSALIAFPALLVRIYSG 218
            +  ++        +V    G
Sbjct: 180 LAKPLNFASNIAGFIVFFSFG 200


>gi|333027286|ref|ZP_08455350.1| putative integral membrane protein [Streptomyces sp. Tu6071]
 gi|332747138|gb|EGJ77579.1| putative integral membrane protein [Streptomyces sp. Tu6071]
          Length = 478

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 8/156 (5%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           +GT+  V    +  +   + R G  +N++I         + + + +L  + +    L   
Sbjct: 268 LGTNKAVAIVGTGGAAFTYVRKGAPVNVRIAVGIGGAALLGSTIGALFAAGISSDVLRPM 327

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDN------YVKYIWGMVTGFLSGALGVGGGIFTNL 183
             +  L +   ++ R     +   P            + G+  G   G  G G G F  L
Sbjct: 328 IMVVLLAVLAFVMLRPAFGTQAAGPAAGRGRVVAAILLAGLGIGAYDGFFGPGTGTFLVL 387

Query: 184 LMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
            +       +  A+AT+  V+      AL+     G
Sbjct: 388 ALTAVLRLDLVSASATAKIVNTCTNLGALVTFAVQG 423



 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 7/96 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  I++A    G   G FG G G  +V  L+   +L  +        A  T+  V   T+
Sbjct: 360 VAAILLAGLGIGAYDGFFGPGTGTFLVLALTAVLRLDLVS-------ASATAKIVNTCTN 412

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI 118
           + + +     G +   +         I  +  +   
Sbjct: 413 LGALVTFAVQGNVMWGLALPLAACNLIGGMTGAHTA 448


>gi|257464498|ref|ZP_05628869.1| hypothetical protein AM202_04552 [Actinobacillus minor 202]
 gi|257450158|gb|EEV24201.1| hypothetical protein AM202_04552 [Actinobacillus minor 202]
          Length = 254

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 13/206 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +   D + ++   +  +G +  + G GGGL+ +P L       GI  +    +A+GT+  
Sbjct: 2   ELAFDTLIILFAVATFAGFIDAIAG-GGGLLTIPALLSV----GIPPA----IALGTNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                S  + +   +   +++  +K  +F+  I   + ++++  +D + L  A     LL
Sbjct: 53  QSCGGSFSASLYFIKQKAVDLHQIKLILFLTFIGATLGTILVQMIDVNALKSALPFLILL 112

Query: 137 MGILMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL-MLFYGASI 192
           +GI  L    +     +++       +I  M  GF  G  G   G F  L  +L  G ++
Sbjct: 113 IGIYFLFSPNVGDGERKQRVSLVVFAFIAAMPIGFYDGLFGPATGSFFTLACLLLLGFNL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSG 218
            K+ A +  ++    F +LL  I  G
Sbjct: 173 SKSVAHAKVLNFASNFASLLFFILGG 198


>gi|228952543|ref|ZP_04114620.1| Permease [Bacillus thuringiensis serovar kurstaki str. T03a001]
 gi|228807154|gb|EEM53696.1| Permease [Bacillus thuringiensis serovar kurstaki str. T03a001]
          Length = 279

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 55/264 (20%), Positives = 101/264 (38%), Gaps = 36/264 (13%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
            F+ G L G+ G+GG  ++ P L       GI  S    VA+GT L   + T +    +H
Sbjct: 31  GFIIGGLVGVTGIGGAALLTPFLLTL----GISPS----VAVGTDLVYNSITKMFGISQH 82

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIFCLLMGILMLK 143
            +  TIN K++K        + ++  ++I  +       +  +        +L  I +  
Sbjct: 83  WKQKTINFKLVKYLAIGSLPSAIIAVIIIHFLPIFHDNREGIIKYILGYVLILAAISIFI 142

Query: 144 RDRLYCERKFP---------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIY 193
           +   Y E                +  + G + GF+ G   VG G    + M++ Y     
Sbjct: 143 KTFFYNESTQSFFQKQTMVQKKNLTILIGAILGFIVGLTSVGSGSLFAIAMIYLYRLKPS 202

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +   T    + L+   A ++ +            +LG V+   ++ +L  SI    L +K
Sbjct: 203 ELVGTDITHAFLLVTVASILNM------------NLGNVDYLLLIHLLIGSIPGVILGSK 250

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
            S  I  K L I  ++I+  +   
Sbjct: 251 FSTKIPVKPLQIFLAIIIGVSGLK 274



 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 51/139 (36%), Gaps = 7/139 (5%)

Query: 4   LLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD 63
             YN S   F  K  +V    L I+   + G + GL  VG G +    +   ++L   + 
Sbjct: 145 FFYNESTQSFFQKQTMVQKKNLTILIGAILGFIVGLTSVGSGSLFAIAMIYLYRLKPSEL 204

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
                  +GT +        ++ + +   G ++  +L   +       ++ S   + +  
Sbjct: 205 -------VGTDITHAFLLVTVASILNMNLGNVDYLLLIHLLIGSIPGVILGSKFSTKIPV 257

Query: 124 SFLNKAFAIFCLLMGILML 142
             L    AI   + G+ ++
Sbjct: 258 KPLQIFLAIIIGVSGLKLV 276


>gi|309385844|gb|ADO66771.1| protein of unknown function DUF81 [Enterococcus faecium]
          Length = 247

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 96/242 (39%), Gaps = 24/242 (9%)

Query: 41  GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKIL 100
           G+GGG+++ P+         I       ++  +++ V   + V +  +      I+ +I+
Sbjct: 10  GMGGGVLIKPIFDF------IGAHSVAAISFYSTVAVFTMSLVSTARQLASGRKIHWQIV 63

Query: 101 KDWIFVLPITTVVTSLMISHV-------DKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
                   +  ++ ++   H+       D+  + + F     L+      +       + 
Sbjct: 64  LWVSGGAVLGGILGNVAFDHLLLLFQNEDEVQMIQIFLTVVTLLFAFFYTKYDW-PGFQL 122

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATATSAGVSALIAFPALL 212
            +N+     G+V GFL+  LG+GGG     LLML +   I +AT  S           ++
Sbjct: 123 KNNFWYCFCGLVLGFLASLLGIGGGPINVSLLMLMFALPIKEATVYSICTIFFSQLAKIV 182

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
               +G    GL         +  +  ++P +I+   L  K+S ++  + +T+ F  ++F
Sbjct: 183 T--IAGTTGFGLYD-------LKILWFVIPAAIVGGLLGAKVSTVLSPQKVTLVFQTVIF 233

Query: 273 TT 274
             
Sbjct: 234 LV 235



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 10/123 (8%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
                  + G L+ L G+GGG + V +L   F       ++ +  A   S+  I  + + 
Sbjct: 127 WYCFCGLVLGFLASLLGIGGGPINVSLLMLMF-------ALPIKEATVYSICTIFFSQLA 179

Query: 85  SFMEHR---RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             +        G  ++KIL   I    +  ++ + + + +    +   F     L+ I+ 
Sbjct: 180 KIVTIAGTTGFGLYDLKILWFVIPAAIVGGLLGAKVSTVLSPQKVTLVFQTVIFLVLIIN 239

Query: 142 LKR 144
           L  
Sbjct: 240 LYN 242


>gi|126173885|ref|YP_001050034.1| hypothetical protein Sbal_1653 [Shewanella baltica OS155]
 gi|304409756|ref|ZP_07391376.1| protein of unknown function DUF81 [Shewanella baltica OS183]
 gi|307304112|ref|ZP_07583865.1| protein of unknown function DUF81 [Shewanella baltica BA175]
 gi|125997090|gb|ABN61165.1| protein of unknown function DUF81 [Shewanella baltica OS155]
 gi|304352274|gb|EFM16672.1| protein of unknown function DUF81 [Shewanella baltica OS183]
 gi|306913010|gb|EFN43433.1| protein of unknown function DUF81 [Shewanella baltica BA175]
          Length = 256

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 79/209 (37%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  +  +    ++   + ++G +  + G GGGL+ +P L  A         +   VA+GT
Sbjct: 1   MEFELTLQIAAILFAVAMVAGFIDAIAG-GGGLLTIPALMWA--------GLPPAVALGT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  + +   R G +++K +K  +    I   + ++++  VD   L       
Sbjct: 52  NKLQACGGSFFASLYFVRKGLVDLKSVKLALICAFIGAALGTILVQLVDTKVLELMLPFL 111

Query: 134 CLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
            L +G   L   ++  + K          +   +  G   G  G G G  F    +   G
Sbjct: 112 ILAIGCYFLFSKKISEDDKHQVLTPTAFAFTAALGVGLYDGFFGPGTGSFFALAFVSLAG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             + KATA +  ++      +L+     G
Sbjct: 172 FGLAKATAHAKLLNFSTNIASLIFFALGG 200


>gi|325205500|gb|ADZ00953.1| putative membrane protein [Neisseria meningitidis M04-240196]
          Length = 262

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 91/261 (34%), Gaps = 26/261 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  + + + ++G +  + G GGGL+ +P L     L GI        A+ T+    A  
Sbjct: 6   IILALGLVAMIAGFIDAIAG-GGGLITLPALL----LAGIPPVS----AIATNKLQAAAA 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  + +   R G I+ K          +  V  +L +S V K  L     +  + + +  
Sbjct: 57  TFSATVSFARKGLIDWKKGLPIAAASFVGGVAGALSVSLVSKDILLAVVPVLLIFVALYF 116

Query: 142 LKRDRLYCERKFPDNYVKYIWG----MVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
           +   +L   ++       +++G     + GF  G  G G G  F    ++  G  +  A 
Sbjct: 117 VFSPKLDGSKEGKARMSFFLFGLTVASLLGFYDGVFGPGVGSFFLIAFIVLLGCKLLNAM 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           + +   +      +L V +  G             +       +   + +   L  + + 
Sbjct: 177 SYTKLANVACNLGSLSVFLLHGS------------IIFPIAATMAVGAFVGANLGARFAV 224

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G K +     +I  + +  
Sbjct: 225 CFGSKLIKPLLIVISISMAVK 245


>gi|313499639|gb|ADR61005.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 261

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 95/273 (34%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             +A  + G + G+ GVGGG +M P+L            I    A+GT L   A T    
Sbjct: 8   FTIAGLVVGFIVGMTGVGGGSLMTPILLWF--------GIHPATAVGTDLLYAAITKASG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS--HVDKSFLNKAF----AIFCLLMGI 139
              H R+  I+ KI             +T   +S  H D S LN       A+  +L  +
Sbjct: 60  VWVHARNKNIDWKITGLLSLGSVPAAALTLWFLSTLHADTSALNAIIKQGLAVVLILTAL 119

Query: 140 LMLKRDRLYC-----------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + RL                   N +  + G+V G +     +G G      L +L
Sbjct: 120 AILFKSRLQAFASRHAGDHYHLSDRSLNILTVLTGVVLGIMVTLTSIGAGALGTVALFLL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +          +G G  G+     G ++   +  +L  S+ 
Sbjct: 180 YPFLVTRRLVGTEIAHAVPLTL-------VAGLGHAGM-----GNMDWSLLGYLLLGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + L+  I  + L    + ++    +  A
Sbjct: 228 GIYLGSHLTGRISDRVLRPCLAAMLLMIGYKLA 260



 Score = 38.9 bits (90), Expect = 0.85,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 27/57 (47%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
            ++   I G+V GF+ G  GVGGG     ++L++G     A  T    +A+     +
Sbjct: 4   GSFGFTIAGLVVGFIVGMTGVGGGSLMTPILLWFGIHPATAVGTDLLYAAITKASGV 60



 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 42/120 (35%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + G +  L  +G G +    L   +  +           +GT +    P ++
Sbjct: 148 ILTVLTGVVLGIMVTLTSIGAGALGTVALFLLYPFL------VTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G ++  +L   +        + S +   +    L    A   L++G  +  
Sbjct: 202 VAGLGHAGMGNMDWSLLGYLLLGSLPGIYLGSHLTGRISDRVLRPCLAAMLLMIGYKLAF 261


>gi|307319985|ref|ZP_07599407.1| protein of unknown function DUF81 [Sinorhizobium meliloti AK83]
 gi|306894362|gb|EFN25126.1| protein of unknown function DUF81 [Sinorhizobium meliloti AK83]
          Length = 207

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 1/197 (0%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S   H  H  I+ K+    I       ++ + +++  D   +      +  ++G
Sbjct: 1   MFTTAASGSAHLYHRNIDWKLFWRLIPFGIAGGMLGAFVVTSFDGDQVKPFVTAYLAVIG 60

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             +L R             +    G   GFL  A G G G      +L  G        T
Sbjct: 61  AWLLYRSFHRIPTNPVKLRIVAPLGATAGFLDAAGGGGWGPVATTGLLGAGGQPRFVIGT 120

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 LIA    L  + +    +          ++ ++  ++   +L  P A  +   +
Sbjct: 121 VNASEFLIALSVSLSFLATVLTGHWEQAGDFR-DHLTSIGGLITGGVLAAPFAGWVVKAL 179

Query: 259 GKKYLTIGFSMIMFTTS 275
            +K L      ++   +
Sbjct: 180 QEKTLLRLVGSLITLLA 196


>gi|119385456|ref|YP_916512.1| hypothetical protein Pden_2732 [Paracoccus denitrificans PD1222]
 gi|119375223|gb|ABL70816.1| protein of unknown function DUF81 [Paracoccus denitrificans PD1222]
          Length = 307

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 99/293 (33%), Gaps = 56/293 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    V      +I    + G +SGLFGVGGG ++ P+L       GI  +    +
Sbjct: 1   MQIYLPIAEVAVNALTLIGLGGIVGLMSGLFGVGGGFLITPLLFFI----GIPPA----I 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KS 124
           A+ T    +  +S    + H +  T++ ++    +    + +    L+ + +        
Sbjct: 53  AVATGANQVVASSFSGVLAHVKRKTVDFRMGWVLLAGGLVGSSAGVLLFNLLSRLGQVDL 112

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK------------------------- 159
            +   + +F  L+G +ML+       R      +K                         
Sbjct: 113 VVQLCYVVFLGLIGAMMLQESLRALHRARRSGPIKPMRRHQHGWVHKWPLKMKFRASGLY 172

Query: 160 ------YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                  + G   G L   +GVGGG      M++  G        TS      ++    L
Sbjct: 173 ISSIPVLLVGAAVGVLGALMGVGGGFIMVPAMIYLLGMPTKVVIGTSLFQITFLSAYTTL 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           +   S   ++ +             ++++   +    + T L   +  + L I
Sbjct: 233 MHAVSSNTVDVMLA-----------VLLIVGGVTGAQIGTHLGARLRAEQLRI 274


>gi|254368857|ref|ZP_04984870.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157121778|gb|EDO65948.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 249

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 99/263 (37%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +I+  F+ G   GL G GG ++ VP+L+           +  H A+  SL V+  T++
Sbjct: 1   MFLIIFGFICGIALGLTGGGGSILAVPLLTY-------GVDLDFHSAVTISLLVVGFTAI 53

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + + +   I+       I    +   + S +   +    L  +F+I  +L+G   L 
Sbjct: 54  FGLIVNYKQHDIHYIAAAVMICTGVVFAPIGSYISQDLSDKLLMLSFSILMILIGAWSLL 113

Query: 144 RDRLYCERK--------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYK 194
           + ++    +                I G V G L+G  GVGGG      ++F     I +
Sbjct: 114 KAKIMSSSQKSVCKSIGSRCIVALLISGAVVGTLTGFFGVGGGFLIVPALVFITAMPIKR 173

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A  TS  V  +++    +              +    ++     + +  S +   LATK+
Sbjct: 174 AINTSLLVIFVVSISGFIS------------HYDKANMSWYIASMFIVGSAIGMLLATKV 221

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
                 K L   F++++     V
Sbjct: 222 KKSFNDKVLQTIFAIMLVILGVV 244



 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 7/121 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++++  + GTL+G FGVGGG ++VP L           ++ +  A+ TSL VI   S
Sbjct: 134 IVALLISGAVVGTLTGFFGVGGGFLIVPALVFI-------TAMPIKRAINTSLLVIFVVS 186

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +  F+ H     ++  I   +I    I  ++ + +    +   L   FAI  +++G+++ 
Sbjct: 187 ISGFISHYDKANMSWYIASMFIVGSAIGMLLATKVKKSFNDKVLQTIFAIMLVILGVVIY 246

Query: 143 K 143
            
Sbjct: 247 L 247


>gi|323442981|gb|EGB00603.1| hypothetical protein SAO46_1108 [Staphylococcus aureus O46]
          Length = 256

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +II+  F++  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   LTMIIIIILFGFIAAFIDSVVG-GGGLISTPALLAI--------GLPPSVALGTNKLASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+ S ++  R G +++ ++      + + +   + + + V    L     I    + I
Sbjct: 56  FGSLTSTIKFIRSGKVDLYVVTKLFGFVFLASACGAYIATMVPSQILKPLIIIALSSVFI 115

Query: 140 LMLKRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             L +      R      F    +     ++ GF  G +G G G F   ++L +G     
Sbjct: 116 FTLLKKDWGNTRTFTQFTFKKAILFAALFILIGFYDGFVGGGTGSFMLFVLLVFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A   +  ++      AL++ +  G
Sbjct: 176 AAGNAKVLNFASNIGALVLFMVLG 199


>gi|326315182|ref|YP_004232854.1| hypothetical protein Acav_0364 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323372018|gb|ADX44287.1| protein of unknown function DUF81 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 252

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 92/253 (36%), Gaps = 25/253 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +AS L+G +  + G GGGL++VP L   F       +      +GT+       + 
Sbjct: 4   IIVSLASLLAGFVDAIVG-GGGLILVPALFATF------PNAPPATLLGTNKSGSIWGTA 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++  ++ R   I  + L              +  ++ V   FL +      L + +  L 
Sbjct: 57  IATWQYSRRVQIRWQSLLPAAAAGFAGGFAGAWTVTVVPVDFLRRILPFILLAVLLYTLA 116

Query: 144 RDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATA 197
           R  L            +  V  + G+  GF  G  G G G F   L +   G     A+A
Sbjct: 117 RKDLGKHHAPRFEGAAETRVACLIGLAIGFYDGFFGPGTGSFFVFLFVRLLGYDFLNASA 176

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           ++  ++      AL++    G             V     L +   +++ + L T ++  
Sbjct: 177 SAKLLNLATNVAALILFTAKGQ------------VWWHFALPLAVANVVGSVLGTHMAMK 224

Query: 258 IGKKYLTIGFSMI 270
            G  ++   F ++
Sbjct: 225 HGTGFVRGIFILV 237


>gi|153000165|ref|YP_001365846.1| hypothetical protein Shew185_1638 [Shewanella baltica OS185]
 gi|217973867|ref|YP_002358618.1| hypothetical protein Sbal223_2705 [Shewanella baltica OS223]
 gi|151364783|gb|ABS07783.1| protein of unknown function DUF81 [Shewanella baltica OS185]
 gi|217499002|gb|ACK47195.1| protein of unknown function DUF81 [Shewanella baltica OS223]
          Length = 256

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 78/209 (37%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  +  +    ++   + ++G +  + G GGGL+ +P L            +   VA+GT
Sbjct: 1   MEFELTLQIAAILFAVAMVAGFIDAIAG-GGGLLTIPALMW--------TGLPPAVALGT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  + +   R G +++K +K  +    I   + ++++  VD   L       
Sbjct: 52  NKLQACGGSFFASLYFVRKGLVDLKSVKLALICAFIGAALGTILVQLVDTKVLELMLPFL 111

Query: 134 CLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
            L +G   L   ++  + K          +   +  G   G  G G G  F    +   G
Sbjct: 112 ILAIGCYFLFSKKISEDDKHQVLTPTAFAFTAALGVGLYDGFFGPGTGSFFALAFVSLAG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             + KATA +  ++      +L+     G
Sbjct: 172 FGLAKATAHAKLLNFSTNIASLIFFALGG 200


>gi|294678753|ref|YP_003579368.1| hypothetical protein RCAP_rcc03237 [Rhodobacter capsulatus SB 1003]
 gi|294477573|gb|ADE86961.1| protein of unknown function DUF81, transmembrane [Rhodobacter
           capsulatus SB 1003]
          Length = 306

 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 88/260 (33%), Gaps = 55/260 (21%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           VGGG ++ P+L       GI  +    VA+ T    +  +SV   +   R   +++ +  
Sbjct: 33  VGGGFIITPLLFFI----GIPPT----VAVATGANQVVASSVSGVLAQFRRKAVDVPMGM 84

Query: 102 DWIFVLPITTVVTSLMISHV-----DKSFLNKAFAIFCLLMGILML-------------- 142
                  + + +  L+ + +         +  A+ +F   +G +ML              
Sbjct: 85  VLQAGGLLGSGLGILVFNWLTRLGQVDLAVQLAYVVFLGGIGAMMLQESIRALRRANRPG 144

Query: 143 ----------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
                            + R      +      ++ GM  G L+  +GVGGG      M+
Sbjct: 145 AVRPRDQSRKLVHRLPFKMRFRTSGLYISVIPPFVIGMAVGVLAAVMGVGGGFIMVPAMI 204

Query: 187 F-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           +  G        TS     +++    L+   +   ++ +             L+++   +
Sbjct: 205 YLLGMPTKVVIGTSLFQILIVSAFTTLLHAITNQSVDVMLA-----------LLLIVGGV 253

Query: 246 LITPLATKLSYMIGKKYLTI 265
           +   + T+L   +  + L I
Sbjct: 254 VGAQIGTRLGAKLRAEQLRI 273



 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 9/119 (7%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M F +    +  I   ++     G L+ + GVGGG +MVP +            +   V 
Sbjct: 163 MRFRTSGLYISVIPPFVI-GMAVGVLAAVMGVGGGFIMVPAMIYLL-------GMPTKVV 214

Query: 71  MGTSLGVIAPTSVMSFMEHR-RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +GTSL  I   S  + + H   + ++++ +    I    +   + + + + +    L  
Sbjct: 215 IGTSLFQILIVSAFTTLLHAITNQSVDVMLALLLIVGGVVGAQIGTRLGAKLRAEQLRI 273


>gi|260888189|ref|ZP_05899452.1| putative membrane protein [Selenomonas sputigena ATCC 35185]
 gi|330838469|ref|YP_004413049.1| protein of unknown function DUF81 [Selenomonas sputigena ATCC
           35185]
 gi|260862023|gb|EEX76523.1| putative membrane protein [Selenomonas sputigena ATCC 35185]
 gi|329746233|gb|AEB99589.1| protein of unknown function DUF81 [Selenomonas sputigena ATCC
           35185]
          Length = 252

 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 78/205 (38%), Gaps = 14/205 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ +  I +  F S  +  + G GGGL+ +P L            + +   +GT+     
Sbjct: 3   LEMLLFICIMGFFSAFIDAVVG-GGGLISIPALMM--------TGLPLLEVLGTNKAAAV 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  SF+   + G ++MK+++    +  + + V  L++  V   FL     +   L+ +
Sbjct: 54  MGACTSFISFIKSGKVDMKLIRLLFPITLLGSAVGVLVVRQVPPDFLRPLVVVMLALVLL 113

Query: 140 LMLKRDRLYCERKFPDN-----YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             + R     E K+         +  +     GF  G  G G G F     L  G     
Sbjct: 114 YSIFRRDWGRENKYRGMTRRVLLLSVVVAFTFGFYDGFFGPGTGSFMLFAFLLVGFDFLG 173

Query: 195 ATATSAGVSALIAFPALLVRIYSGW 219
           A A +  ++      A+++  Y G 
Sbjct: 174 AAANARALNFASNLAAVVLFAYFGL 198


>gi|283458284|ref|YP_003362903.1| putative permease [Rothia mucilaginosa DY-18]
 gi|283134318|dbj|BAI65083.1| predicted permease [Rothia mucilaginosa DY-18]
          Length = 261

 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 99/267 (37%), Gaps = 30/267 (11%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +   ++++A+F +G +  + G GGG++ +P L        +        A+ T+    A 
Sbjct: 10  ELFIVLLLAAFCAGCIDSVVG-GGGMIQLPALL-------MAPGFSPVAALSTNKVASAM 61

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            ++ S   + R   I  KIL    FV    +   +   + +         AI  +L  IL
Sbjct: 62  GTLTSASTYIRSLKIPWKILLPVAFVAFCASAAGAYCATILPAHIFRP--AIVVVLAAIL 119

Query: 141 MLKRDRLYCERKFPDNYVK-------YIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
           +    +    R  P            +  G++ G   G LG G G +    L +  G  +
Sbjct: 120 VFSVLQPRIPRGQPRALTTSSFLVCGFALGLILGGYDGILGAGTGAMMLVALQIAMGYDM 179

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             ATA +  ++      ALL  I             LG ++    + +   ++  + +  
Sbjct: 180 LHATAAAKVLNTATNLGALLYFI------------PLGAIHWLLGIAMGCANMAGSWVGA 227

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           + +  +G++++     ++M       +
Sbjct: 228 RTAIHLGERFIRRVLVIVMTLMLLRMS 254


>gi|111017916|ref|YP_700888.1| hypothetical protein RHA1_ro00898 [Rhodococcus jostii RHA1]
 gi|110817446|gb|ABG92730.1| possible membrane protein [Rhodococcus jostii RHA1]
          Length = 321

 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 82/248 (33%), Gaps = 23/248 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +    +  + G  G+  G+      +      G+  +     A          T+
Sbjct: 4   LLIFTLVGVGAQLVDGALGMAFGVTA----TTLLVFSGVGPAH----ASAAVHFAEVGTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H R   I+  ++            + + ++S +  +      +   L +GI +L
Sbjct: 56  LASGASHWRFRNIDWSLVLRLGVPGAAGAFLGATVLSQLSTAAAVPVTSTILLAIGIYVL 115

Query: 143 KRDRLYC-----ERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKA 195
            R  +        R  P         G+  GF+  + G G G  T   +L  G  +    
Sbjct: 116 LRFSIRPPAVNDARTSPHTAKFLSPLGLFGGFIDASGGGGWGPITTSTLLSRGKTAPRTV 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             + +    L++  A +  I+ G G +        F NI  +  +    I+  PLA  L 
Sbjct: 176 IGSVSASEFLVSAAASIGFIF-GLGSDF-------FDNIPIIAGLALGGIIAAPLAAWLV 227

Query: 256 YMIGKKYL 263
             +    L
Sbjct: 228 SRVPATLL 235


>gi|300922059|ref|ZP_07138201.1| putative inner membrane protein [Escherichia coli MS 182-1]
 gi|301328833|ref|ZP_07221875.1| putative inner membrane protein [Escherichia coli MS 78-1]
 gi|300421559|gb|EFK04870.1| putative inner membrane protein [Escherichia coli MS 182-1]
 gi|300844782|gb|EFK72542.1| putative inner membrane protein [Escherichia coli MS 78-1]
          Length = 269

 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 13/180 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLGVLFFVAMLAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +  I ++  +L++ +V    L +   I  + +G+  
Sbjct: 65  SISATIYFIRRKVVSLSDQKLNIAMTFIGSMSGALLVQYVQADVLRQILPILVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G   G F  L  +   G ++ KATA
Sbjct: 125 LLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATA 184


>gi|94970938|ref|YP_592986.1| hypothetical protein Acid345_3912 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94552988|gb|ABF42912.1| protein of unknown function DUF81 [Candidatus Koribacter versatilis
           Ellin345]
          Length = 278

 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 84/259 (32%), Gaps = 45/259 (17%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +V+VP+L+           + +  A+G SL  +  TS  +   + R G  N++I      
Sbjct: 30  VVIVPLLALFLH-------VDIRYAIGASLVSVIATSSGAAAAYVREGYSNIRIGMFLEI 82

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI---- 161
                 +  + + + V  S++   F +  L    L  ++       +  D     +    
Sbjct: 83  ATTFGALAGAYLATRVATSWIAVIFGMVLLYSAYLSSRQRTGDVVDQSRDKLATALRLNG 142

Query: 162 ---------------------WGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATS 199
                                     G LSG LG+G G    L M          +T TS
Sbjct: 143 SFPGTNGPQSYNVHNVPTGFSLMFAAGTLSGLLGIGSGAVKVLAMDQAMRIPFKVSTTTS 202

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +  + A  +  V +  G+    L         +  +L +L  S+L      K+     
Sbjct: 203 NFMIGVTAAASAGVYLSRGYIHPALA--------MPVMLGVLAGSML----GAKVLVRAR 250

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            K L   F+ ++    F  
Sbjct: 251 VKVLRWVFAGVIVVLGFEM 269



 Score = 49.3 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +GTLSGL G+G G V V         M     I   V+  TS  +I  T+  S   + 
Sbjct: 166 FAAGTLSGLLGIGSGAVKV-------LAMDQAMRIPFKVSTTTSNFMIGVTAAASAGVYL 218

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I+  +    +  +   +++ + ++       L   FA   +++G  M+  
Sbjct: 219 SRGYIHPALAMPVMLGVLAGSMLGAKVLVRARVKVLRWVFAGVIVVLGFEMIFN 272


>gi|323440741|gb|EGA98450.1| hypothetical protein SAO11_0389 [Staphylococcus aureus O11]
          Length = 219

 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +II+  F++  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   LTMIIIIILFGFIAAFIDSVVG-GGGLISTPALLAI--------GLPPSVALGTNKLASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+ S ++  R G +++ ++      + + +   + + + V    L     I    + I
Sbjct: 56  FGSLTSTIKFIRSGKVDLYVVAKLFGFVFLASACGAYIATMVPSQILKPLIIIALSSVFI 115

Query: 140 LMLKRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             L +      R      F    +     ++ GF  G +G G G F   ++L +G     
Sbjct: 116 FTLLKKDWGNTRTFTQFTFKKAILFAALFILIGFYDGFVGGGTGSFMLFVLLVFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A   +  ++      AL++ +  G
Sbjct: 176 AAGNAKVLNFASNIGALVLFMVLG 199


>gi|21283386|ref|NP_646474.1| hypothetical protein MW1657 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486539|ref|YP_043760.1| hypothetical protein SAS1641 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|253732364|ref|ZP_04866529.1| membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|297207574|ref|ZP_06924009.1| membrane protein [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300911655|ref|ZP_07129099.1| membrane protein [Staphylococcus aureus subsp. aureus TCH70]
 gi|21204826|dbj|BAB95522.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49244982|emb|CAG43443.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|253723886|gb|EES92615.1| membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|296887591|gb|EFH26489.1| membrane protein [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300887076|gb|EFK82277.1| membrane protein [Staphylococcus aureus subsp. aureus TCH70]
 gi|302333379|gb|ADL23572.1| sulfite exporter TauE/SafE-like protein [Staphylococcus aureus
           subsp. aureus JKD6159]
          Length = 256

 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +II+  F++  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   LTMIIIIILFGFIAAFIDSVVG-GGGLISTPALLAI--------GLPPSVALGTNKLASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+ S ++  R G +++ ++      + + +   + + + V    L     I    + I
Sbjct: 56  FGSLTSTIKFIRSGKVDLYVVAKLFGFVFLASACGAYIATMVPSQILKPLIIIALSSVFI 115

Query: 140 LMLKRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             L +      R      F    +     ++ GF  G +G G G F   ++L +G     
Sbjct: 116 FTLLKKDWGNTRTFTQFTFKKAILFAALFILIGFYDGFVGGGTGSFMLFVLLVFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A   +  ++      AL++ +  G
Sbjct: 176 AAGNAKVLNFASNIGALVLFMVLG 199


>gi|119774403|ref|YP_927143.1| hypothetical protein Sama_1266 [Shewanella amazonensis SB2B]
 gi|119766903|gb|ABL99473.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
          Length = 260

 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 79/213 (37%), Gaps = 13/213 (6%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + VF+     ++   L+   + L+G +  + G GGGL+ +P L  A         +    
Sbjct: 1   MDVFMDFAFSIELAALLFFVAMLAGFIDAIAG-GGGLLTIPALMWA--------GLSPAA 51

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+       S  + +   R   +++  +K  IF   +   + ++ +  +D S L   
Sbjct: 52  ALATNKLQACGGSFFASLYFVRKKMVDLASIKLDIFCAFVGAAIGTIAVQLIDASMLKTL 111

Query: 130 FAIFCLLMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
                L +G   L   ++      R        +   +  GF  G  G G G  F    +
Sbjct: 112 LPFLMLAIGGYFLFSKKVSEDDRHRVLTPTLFAFSAALGIGFYDGFFGPGTGSFFALAFV 171

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
              G  + KATA +  ++      +L+     G
Sbjct: 172 SLAGFGLAKATAHAKVLNFATNISSLIFFALGG 204


>gi|312973412|ref|ZP_07787584.1| conserved hypothetical protein [Escherichia coli 1827-70]
 gi|310332007|gb|EFP99242.1| conserved hypothetical protein [Escherichia coli 1827-70]
 gi|323936617|gb|EGB32904.1| inner membrane protein yfcA [Escherichia coli E1520]
          Length = 269

 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 74/180 (41%), Gaps = 13/180 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLGVLFFVAMLAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +  + ++  +L++ +V    L +   I  + +G+  
Sbjct: 65  SISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G   G F  L  +   G ++ KATA
Sbjct: 125 LLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATA 184


>gi|283770792|ref|ZP_06343684.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           H19]
 gi|283460939|gb|EFC08029.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           H19]
          Length = 256

 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 79/207 (38%), Gaps = 14/207 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  +  I  IIV  F++  +  + G GGGL+  P L            +   VA+GT+  
Sbjct: 2   DISLTMIITIIVFGFIAAFIDAVVG-GGGLISTPALLAI--------GLPPSVALGTNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  S+ S ++  R G +++ ++      + + +   + + + V    L     I    
Sbjct: 53  ASSFGSLTSTIKFIRSGKVDLYVVAKLFGFVFLASACGAYIATMVPSQILKPLIIIALSS 112

Query: 137 MGILMLKRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
           + I  L +      R      F    +     ++ GF  G +G   G F   ++L +G  
Sbjct: 113 VFIFTLLKKDWGNTRTFTQFTFKKALLFAALFILIGFYDGFVGGETGSFMLFVLLIFGFD 172

Query: 192 IYKATATSAGVSALIAFPALLVRIYSG 218
              A   +  ++      AL++ +  G
Sbjct: 173 FLSAAGNAKVLNFASNIGALVLFMVLG 199


>gi|152997953|ref|YP_001342788.1| hypothetical protein Mmwyl1_3956 [Marinomonas sp. MWYL1]
 gi|150838877|gb|ABR72853.1| protein of unknown function DUF81 [Marinomonas sp. MWYL1]
          Length = 256

 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 55/272 (20%), Positives = 106/272 (38%), Gaps = 26/272 (9%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M F+  D  +     +  A+F +G +  + G GGGL+ VPVL  A         +    A
Sbjct: 1   MDFVFFDISIWIYLALFAAAFFAGVIDAIAG-GGGLITVPVLLAA--------GLSPAEA 51

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           + T+       +V +     + G + +  +   I +  I  +  +L++S++D S L KA 
Sbjct: 52  LATNKLQGCAGTVSASYHFIKKGQVKLSDMWLPILMTAIGAICGTLLVSYLDSSLLLKAV 111

Query: 131 AIFCLLMGILMLKRDRLYC----ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
            I  + + I      ++      +          I G   GF  G +G G G  F+   +
Sbjct: 112 PIILIAVAIFFFFLPKVQPYIASKFSLTHIQFAVIIGTSIGFYDGLIGPGTGAFFSTAYL 171

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
              G ++  ATA +  ++A     +L +  +SG  +     W+LG       +++     
Sbjct: 172 CLMGLTVVSATAHTKVLNATSNLASLAMFAFSGHLI-----WALG-------IVMGIGQW 219

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               + ++L    G K +     ++    S  
Sbjct: 220 FGAQIGSRLVITKGAKLIRPMVIIMCLAISVK 251


>gi|229131860|ref|ZP_04260729.1| integral membrane protein [Bacillus cereus BDRD-ST196]
 gi|228651607|gb|EEL07573.1| integral membrane protein [Bacillus cereus BDRD-ST196]
          Length = 255

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 73/203 (35%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++I   FL+  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLIILIAFGFLAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
               S +   R G +++K       +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GCATSNIVFYRSGNLDLKSAFKLFPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +                  +   +  + GF  G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSVSTHKKLSSQHFIIFTFFIFIIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 179 AGNAKLLNLGSNVGALLMFMYVG 201


>gi|227832495|ref|YP_002834202.1| hypothetical protein cauri_0667 [Corynebacterium aurimucosum ATCC
           700975]
 gi|262183639|ref|ZP_06043060.1| hypothetical protein CaurA7_06576 [Corynebacterium aurimucosum ATCC
           700975]
 gi|227453511|gb|ACP32264.1| putative membrane protein [Corynebacterium aurimucosum ATCC 700975]
          Length = 331

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 76/229 (33%), Gaps = 20/229 (8%)

Query: 41  GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKIL 100
           G+G G  +    +    L G+  +    V   + LG    + +     H R G ++   +
Sbjct: 20  GIGMGFGVTS--TTILLLAGLGPATASAVVHTSELGTTLVSGIS----HWRFGNVHWPTV 73

Query: 101 KDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM---LKRDRLYCERKFP--D 155
                   ++  + + ++S++         +   L++GI +     R R    ++     
Sbjct: 74  LKLGVPGGLSAFIGATILSNLSLEAAEPVTSAILLVLGINLVWRFSRPRSSTSQETRQHS 133

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATATSAGVSALIAFPALLVR 214
                  G+V GF+  + G G G  +   LM        +   T      L+ F A    
Sbjct: 134 TPFLAGLGVVGGFVDASGGGGWGPISTSTLMTVGREQPRRIVGTVNTAEFLVTFGATAGF 193

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           I   W                AV+ +L   ++  P+A  L   I    L
Sbjct: 194 IVGLWEEIVANA--------AAVVALLIGGVITAPIAAWLISRINPTLL 234


>gi|258513065|ref|YP_003189322.1| hypothetical protein APA01_41560 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634968|dbj|BAI00943.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256638023|dbj|BAI03991.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256641077|dbj|BAI07038.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256644132|dbj|BAI10086.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256647187|dbj|BAI13134.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256650240|dbj|BAI16180.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256653231|dbj|BAI19164.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256656284|dbj|BAI22210.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 257

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 52/251 (20%), Positives = 93/251 (37%), Gaps = 24/251 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
               D I  +I ++F++G +  L G GGGLV +P L       GI        A+ T+  
Sbjct: 2   QFTFDTILFLISSAFVAGGIDALAG-GGGLVTIPALM----AAGIPPVS----ALATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                +  +F+   R G ++++          +  +  + ++  V+  FL+    +  + 
Sbjct: 53  QSTIGTSSAFLTFLRAGHVDIRQFVLPAIGAFLGALAGATVVQFVNPIFLSAIVPLLLIG 112

Query: 137 MGILMLKRDRLYCERKF--PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
           M    L    L  E +          +     GF  G  G G G F   +++ + G  + 
Sbjct: 113 MAAYFLLAPPLSGEDRHARLGRMGITLCMTSIGFYDGFFGPGTGSFLTTVLVAFAGLGLV 172

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +A A +  ++ L     L   I  G  L     W LGF        +   +IL   +   
Sbjct: 173 RAIANTKFINLLTNVAGLTAMIVGGKVL-----WMLGF-------GMAGANILGNQVGAW 220

Query: 254 LSYMIGKKYLT 264
           L+   G K + 
Sbjct: 221 LAIRYGGKGIR 231


>gi|89256029|ref|YP_513391.1| hypothetical protein FTL_0638 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314508|ref|YP_763231.1| hypothetical protein FTH_0639 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156502040|ref|YP_001428104.1| hypothetical protein FTA_0673 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167010220|ref|ZP_02275151.1| hypothetical protein Ftulh_05745 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254367373|ref|ZP_04983399.1| conserved membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|290953942|ref|ZP_06558563.1| hypothetical protein FtulhU_06623 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312691|ref|ZP_06803436.1| hypothetical protein FtulhU_06615 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|89143860|emb|CAJ79078.1| conservered hypothetical membrane protein [Francisella tularensis
           subsp. holarctica LVS]
 gi|115129407|gb|ABI82594.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134253189|gb|EBA52283.1| conserved membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|156252643|gb|ABU61149.1| conservered hypothetical membrane protein [Francisella tularensis
           subsp. holarctica FTNF002-00]
          Length = 249

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 100/263 (38%), Gaps = 28/263 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +I+  F+ G   GL G GG ++ VP+L+           +  H A+  SL V+  T++
Sbjct: 1   MFLIIFGFICGIALGLTGGGGSILAVPLLTY-------GVDLDFHSAVTISLLVVGFTAI 53

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + + +   I+       I+   +   + S +   +    L  +F+I  +L+G   L 
Sbjct: 54  FGLIVNYKQHDIHYIAAVVMIYTGVVFAPIGSYISQDLSDKLLMLSFSILMILIGAWSLL 113

Query: 144 RDRLYCERK--------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYK 194
           + ++    +                I G V G L+G  GVGGG      ++F     I +
Sbjct: 114 KAKIMSSSQKSVCKSIGSRCIVALLISGAVVGTLTGFFGVGGGFLIVPALVFITAMPIKR 173

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A  TS  V  +++    +              +    ++     + +  S +   LATK+
Sbjct: 174 AINTSLLVIFVVSISGFIS------------HYDKANMSWYIASMFIVGSAIGMLLATKV 221

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
                 K L   F++++     V
Sbjct: 222 KKSFNDKVLQTIFAIMLVILGVV 244



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 7/121 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++++  + GTL+G FGVGGG ++VP L           ++ +  A+ TSL VI   S
Sbjct: 134 IVALLISGAVVGTLTGFFGVGGGFLIVPALVFI-------TAMPIKRAINTSLLVIFVVS 186

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +  F+ H     ++  I   +I    I  ++ + +    +   L   FAI  +++G+++ 
Sbjct: 187 ISGFISHYDKANMSWYIASMFIVGSAIGMLLATKVKKSFNDKVLQTIFAIMLVILGVVIY 246

Query: 143 K 143
            
Sbjct: 247 L 247


>gi|257425828|ref|ZP_05602252.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428494|ref|ZP_05604892.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431128|ref|ZP_05607505.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433810|ref|ZP_05610168.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436727|ref|ZP_05612771.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|282914509|ref|ZP_06322295.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           M899]
 gi|282924855|ref|ZP_06332521.1| hypothetical protein SARG_01742 [Staphylococcus aureus subsp.
           aureus C101]
 gi|293503587|ref|ZP_06667434.1| hypothetical protein SCAG_02109 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293510603|ref|ZP_06669308.1| hypothetical protein SAZG_01258 [Staphylococcus aureus subsp.
           aureus M809]
 gi|293537144|ref|ZP_06671824.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           M1015]
 gi|257271522|gb|EEV03668.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275335|gb|EEV06822.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278076|gb|EEV08724.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281903|gb|EEV12040.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284078|gb|EEV14201.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|282313221|gb|EFB43617.1| hypothetical protein SARG_01742 [Staphylococcus aureus subsp.
           aureus C101]
 gi|282321690|gb|EFB52015.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           M899]
 gi|290919989|gb|EFD97057.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291095253|gb|EFE25518.1| hypothetical protein SCAG_02109 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291466494|gb|EFF09015.1| hypothetical protein SAZG_01258 [Staphylococcus aureus subsp.
           aureus M809]
          Length = 256

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +II+  F++  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   LTMIIIIILFGFIAAFIDSVVG-GGGLISTPALLAI--------GLPPSVALGTNKLASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+ S ++  R G +++ ++      + + +   + + + V    L     I    + I
Sbjct: 56  FGSLTSAIKFIRSGKVDLYVVAKLFGFVFLASACGAYIATMVPSQILKPLIIIALSSVFI 115

Query: 140 LMLKRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             L +      R      F    +     ++ GF  G +G G G F   ++L +G     
Sbjct: 116 FTLLKKDWGNTRTFTQFTFKKAVLFAALFILIGFYDGFVGGGTGSFMLFVLLIFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A   +  ++      AL++ +  G
Sbjct: 176 AAGNAKVLNFASNIGALVLFMVLG 199


>gi|215487540|ref|YP_002329971.1| hypothetical protein E2348C_2467 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312967627|ref|ZP_07781842.1| conserved hypothetical protein [Escherichia coli 2362-75]
 gi|215265612|emb|CAS10015.1| conserved predicted inner membrane protein [Escherichia coli
           O127:H6 str. E2348/69]
 gi|312287824|gb|EFR15729.1| conserved hypothetical protein [Escherichia coli 2362-75]
 gi|323187948|gb|EFZ73243.1| hypothetical protein ECRN5871_3704 [Escherichia coli RN587/1]
          Length = 269

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 75/182 (41%), Gaps = 13/182 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLGVLFFVAMLAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +  + ++  +L++ +V    L +   I  + +G+  
Sbjct: 65  SISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G   G F  L  +   G ++ KATA
Sbjct: 125 LLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATA 184

Query: 198 TS 199
            +
Sbjct: 185 HA 186


>gi|116750710|ref|YP_847397.1| permeases-like [Syntrophobacter fumaroxidans MPOB]
 gi|116699774|gb|ABK18962.1| permeases-like [Syntrophobacter fumaroxidans MPOB]
          Length = 439

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 8/141 (5%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
           +F  + F +    +++    ++   ++     L G GGG ++ P+L   + L        
Sbjct: 277 SFPNIYFSNAGTSINFFGPFLLTLAIA-IFGVLMGAGGGFILNPLLVSLWPLPHT----- 330

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
             V  GT +  +A +     + + +   IN K+       + +   +   +   V  S  
Sbjct: 331 --VVAGTVMPTVAFSQASGIVNYSKIKFINWKLGTTIGLSMVLGAFIGPKLTELVSLSQY 388

Query: 127 NKAFAIFCLLMGILMLKRDRL 147
              F    +++  LM  +   
Sbjct: 389 KFIFGWILIVLAGLMFWQTMP 409



 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 13/120 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           +  ++  +        +G GGG   N L++      +   A              ++   
Sbjct: 293 FGPFLLTLAIAIFGVLMGAGGGFILNPLLVSLWPLPHTVVA------------GTVMPTV 340

Query: 217 SGWGLNGLPPWS-LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +    +G+  +S + F+N      I    +L   +  KL+ ++        F  I+   +
Sbjct: 341 AFSQASGIVNYSKIKFINWKLGTTIGLSMVLGAFIGPKLTELVSLSQYKFIFGWILIVLA 400


>gi|15802874|ref|NP_288901.1| hypothetical protein Z3590 [Escherichia coli O157:H7 EDL933]
 gi|15832465|ref|NP_311238.1| hypothetical protein ECs3211 [Escherichia coli O157:H7 str. Sakai]
 gi|16130262|ref|NP_416830.1| inner membrane protein, UPF0721 family [Escherichia coli str. K-12
           substr. MG1655]
 gi|26248715|ref|NP_754755.1| hypothetical protein c2873 [Escherichia coli CFT073]
 gi|74312844|ref|YP_311263.1| hypothetical protein SSON_2385 [Shigella sonnei Ss046]
 gi|89109147|ref|AP_002927.1| conserved inner membrane protein [Escherichia coli str. K-12
           substr. W3110]
 gi|157155594|ref|YP_001463672.1| hypothetical protein EcE24377A_2622 [Escherichia coli E24377A]
 gi|157161816|ref|YP_001459134.1| hypothetical protein EcHS_A2479 [Escherichia coli HS]
 gi|168748183|ref|ZP_02773205.1| putative membrane protein [Escherichia coli O157:H7 str. EC4113]
 gi|168755086|ref|ZP_02780093.1| putative membrane protein [Escherichia coli O157:H7 str. EC4401]
 gi|168761228|ref|ZP_02786235.1| putative membrane protein [Escherichia coli O157:H7 str. EC4501]
 gi|168767960|ref|ZP_02792967.1| putative membrane protein [Escherichia coli O157:H7 str. EC4486]
 gi|168772940|ref|ZP_02797947.1| putative membrane protein [Escherichia coli O157:H7 str. EC4196]
 gi|168780190|ref|ZP_02805197.1| putative membrane protein [Escherichia coli O157:H7 str. EC4076]
 gi|168787241|ref|ZP_02812248.1| putative membrane protein [Escherichia coli O157:H7 str. EC869]
 gi|168798504|ref|ZP_02823511.1| putative membrane protein [Escherichia coli O157:H7 str. EC508]
 gi|170019364|ref|YP_001724318.1| hypothetical protein EcolC_1325 [Escherichia coli ATCC 8739]
 gi|170081943|ref|YP_001731263.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
 gi|187732893|ref|YP_001881149.1| hypothetical protein SbBS512_E2705 [Shigella boydii CDC 3083-94]
 gi|188495756|ref|ZP_03003026.1| putative membrane protein [Escherichia coli 53638]
 gi|191165458|ref|ZP_03027299.1| putative membrane protein [Escherichia coli B7A]
 gi|193062471|ref|ZP_03043566.1| putative membrane protein [Escherichia coli E22]
 gi|193069763|ref|ZP_03050714.1| putative membrane protein [Escherichia coli E110019]
 gi|194429269|ref|ZP_03061796.1| putative membrane protein [Escherichia coli B171]
 gi|194432826|ref|ZP_03065110.1| putative membrane protein [Shigella dysenteriae 1012]
 gi|194436193|ref|ZP_03068295.1| putative membrane protein [Escherichia coli 101-1]
 gi|195935707|ref|ZP_03081089.1| hypothetical protein EscherichcoliO157_04472 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208806410|ref|ZP_03248747.1| putative membrane protein [Escherichia coli O157:H7 str. EC4206]
 gi|208814051|ref|ZP_03255380.1| putative membrane protein [Escherichia coli O157:H7 str. EC4045]
 gi|208819738|ref|ZP_03260058.1| putative membrane protein [Escherichia coli O157:H7 str. EC4042]
 gi|209396809|ref|YP_002271737.1| hypothetical protein ECH74115_3468 [Escherichia coli O157:H7 str.
           EC4115]
 gi|209919827|ref|YP_002293911.1| hypothetical protein ECSE_2636 [Escherichia coli SE11]
 gi|217327089|ref|ZP_03443172.1| putative membrane protein [Escherichia coli O157:H7 str. TW14588]
 gi|218690487|ref|YP_002398699.1| hypothetical protein ECED1_2791 [Escherichia coli ED1a]
 gi|218695926|ref|YP_002403593.1| hypothetical protein EC55989_2571 [Escherichia coli 55989]
 gi|218705857|ref|YP_002413376.1| hypothetical protein ECUMN_2667 [Escherichia coli UMN026]
 gi|227887387|ref|ZP_04005192.1| membrane protein [Escherichia coli 83972]
 gi|238901502|ref|YP_002927298.1| conserved inner membrane protein [Escherichia coli BW2952]
 gi|253772749|ref|YP_003035580.1| hypothetical protein ECBD_1332 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162336|ref|YP_003045444.1| hypothetical protein ECB_02252 [Escherichia coli B str. REL606]
 gi|254794220|ref|YP_003079057.1| hypothetical protein ECSP_3202 [Escherichia coli O157:H7 str.
           TW14359]
 gi|256017515|ref|ZP_05431380.1| hypothetical protein ShiD9_01280 [Shigella sp. D9]
 gi|256021988|ref|ZP_05435853.1| hypothetical protein E4_01330 [Escherichia sp. 4_1_40B]
 gi|260844915|ref|YP_003222693.1| hypothetical protein ECO103_2792 [Escherichia coli O103:H2 str.
           12009]
 gi|261223218|ref|ZP_05937499.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261259232|ref|ZP_05951765.1| hypothetical protein EscherichiacoliO157EcO_25989 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291283568|ref|YP_003500386.1| Inner membrane protein yfcA [Escherichia coli O55:H7 str. CB9615]
 gi|293405793|ref|ZP_06649785.1| hypothetical protein ECGG_01147 [Escherichia coli FVEC1412]
 gi|293410684|ref|ZP_06654260.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293446664|ref|ZP_06663086.1| hypothetical protein ECCG_00812 [Escherichia coli B088]
 gi|297518934|ref|ZP_06937320.1| hypothetical protein EcolOP_14928 [Escherichia coli OP50]
 gi|298381476|ref|ZP_06991075.1| hypothetical protein ECFG_01207 [Escherichia coli FVEC1302]
 gi|300817466|ref|ZP_07097683.1| putative inner membrane protein [Escherichia coli MS 107-1]
 gi|300897010|ref|ZP_07115489.1| putative inner membrane protein [Escherichia coli MS 198-1]
 gi|300903719|ref|ZP_07121634.1| putative inner membrane protein [Escherichia coli MS 84-1]
 gi|300918500|ref|ZP_07135093.1| putative inner membrane protein [Escherichia coli MS 115-1]
 gi|300936907|ref|ZP_07151794.1| putative inner membrane protein [Escherichia coli MS 21-1]
 gi|300948523|ref|ZP_07162617.1| putative inner membrane protein [Escherichia coli MS 116-1]
 gi|300956404|ref|ZP_07168695.1| putative inner membrane protein [Escherichia coli MS 175-1]
 gi|300983551|ref|ZP_07176645.1| putative inner membrane protein [Escherichia coli MS 45-1]
 gi|301023575|ref|ZP_07187339.1| putative inner membrane protein [Escherichia coli MS 196-1]
 gi|301024160|ref|ZP_07187870.1| putative inner membrane protein [Escherichia coli MS 69-1]
 gi|301049086|ref|ZP_07196070.1| putative inner membrane protein [Escherichia coli MS 185-1]
 gi|301303210|ref|ZP_07209335.1| putative inner membrane protein [Escherichia coli MS 124-1]
 gi|301647569|ref|ZP_07247366.1| putative inner membrane protein [Escherichia coli MS 146-1]
 gi|307138992|ref|ZP_07498348.1| hypothetical protein EcolH7_12823 [Escherichia coli H736]
 gi|307311112|ref|ZP_07590756.1| protein of unknown function DUF81 [Escherichia coli W]
 gi|309793211|ref|ZP_07687639.1| putative inner membrane protein [Escherichia coli MS 145-7]
 gi|331642969|ref|ZP_08344104.1| inner membrane protein YfcA [Escherichia coli H736]
 gi|331663845|ref|ZP_08364755.1| inner membrane protein YfcA [Escherichia coli TA143]
 gi|331673828|ref|ZP_08374591.1| inner membrane protein YfcA [Escherichia coli TA280]
 gi|332278521|ref|ZP_08390934.1| inner membrane protein yfcA [Shigella sp. D9]
 gi|82583822|sp|P0AD32|YFCA_ECO57 RecName: Full=UPF0721 transmembrane protein yfcA
 gi|82583823|sp|P0AD31|YFCA_ECOL6 RecName: Full=UPF0721 transmembrane protein yfcA
 gi|82592533|sp|P0AD30|YFCA_ECOLI RecName: Full=UPF0721 transmembrane protein yfcA
 gi|12516689|gb|AAG57456.1|AE005464_7 putative structural protein [Escherichia coli O157:H7 str. EDL933]
 gi|26109121|gb|AAN81323.1|AE016764_5 Hypothetical protein yfcA [Escherichia coli CFT073]
 gi|41996|emb|CAA34783.1| unnamed protein product [Escherichia coli K-12]
 gi|1788667|gb|AAC75387.1| inner membrane protein, UPF0721 family [Escherichia coli str. K-12
           substr. MG1655]
 gi|1799719|dbj|BAA16183.1| conserved inner membrane protein [Escherichia coli str. K12 substr.
           W3110]
 gi|13362681|dbj|BAB36634.1| putative structural protein [Escherichia coli O157:H7 str. Sakai]
 gi|73856321|gb|AAZ89028.1| putative structural protein [Shigella sonnei Ss046]
 gi|157067496|gb|ABV06751.1| putative membrane protein [Escherichia coli HS]
 gi|157077624|gb|ABV17332.1| putative membrane protein [Escherichia coli E24377A]
 gi|169754292|gb|ACA76991.1| protein of unknown function DUF81 [Escherichia coli ATCC 8739]
 gi|169889778|gb|ACB03485.1| conserved inner membrane protein [Escherichia coli str. K-12
           substr. DH10B]
 gi|187429885|gb|ACD09159.1| putative membrane protein [Shigella boydii CDC 3083-94]
 gi|187771034|gb|EDU34878.1| putative membrane protein [Escherichia coli O157:H7 str. EC4196]
 gi|188017217|gb|EDU55339.1| putative membrane protein [Escherichia coli O157:H7 str. EC4113]
 gi|188490955|gb|EDU66058.1| putative membrane protein [Escherichia coli 53638]
 gi|189002094|gb|EDU71080.1| putative membrane protein [Escherichia coli O157:H7 str. EC4076]
 gi|189357645|gb|EDU76064.1| putative membrane protein [Escherichia coli O157:H7 str. EC4401]
 gi|189362857|gb|EDU81276.1| putative membrane protein [Escherichia coli O157:H7 str. EC4486]
 gi|189368275|gb|EDU86691.1| putative membrane protein [Escherichia coli O157:H7 str. EC4501]
 gi|189372809|gb|EDU91225.1| putative membrane protein [Escherichia coli O157:H7 str. EC869]
 gi|189378920|gb|EDU97336.1| putative membrane protein [Escherichia coli O157:H7 str. EC508]
 gi|190904381|gb|EDV64089.1| putative membrane protein [Escherichia coli B7A]
 gi|192932137|gb|EDV84736.1| putative membrane protein [Escherichia coli E22]
 gi|192956965|gb|EDV87417.1| putative membrane protein [Escherichia coli E110019]
 gi|194412677|gb|EDX28972.1| putative membrane protein [Escherichia coli B171]
 gi|194418814|gb|EDX34899.1| putative membrane protein [Shigella dysenteriae 1012]
 gi|194424921|gb|EDX40906.1| putative membrane protein [Escherichia coli 101-1]
 gi|208726211|gb|EDZ75812.1| putative membrane protein [Escherichia coli O157:H7 str. EC4206]
 gi|208735328|gb|EDZ84015.1| putative membrane protein [Escherichia coli O157:H7 str. EC4045]
 gi|208739861|gb|EDZ87543.1| putative membrane protein [Escherichia coli O157:H7 str. EC4042]
 gi|209158209|gb|ACI35642.1| putative membrane protein [Escherichia coli O157:H7 str. EC4115]
 gi|209764708|gb|ACI80666.1| putative structural protein [Escherichia coli]
 gi|209764710|gb|ACI80667.1| putative structural protein [Escherichia coli]
 gi|209764712|gb|ACI80668.1| putative structural protein [Escherichia coli]
 gi|209764714|gb|ACI80669.1| putative structural protein [Escherichia coli]
 gi|209764716|gb|ACI80670.1| putative structural protein [Escherichia coli]
 gi|209913086|dbj|BAG78160.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|217319456|gb|EEC27881.1| putative membrane protein [Escherichia coli O157:H7 str. TW14588]
 gi|218352658|emb|CAU98439.1| conserved hypothetical protein; putative inner membrane protein
           [Escherichia coli 55989]
 gi|218428051|emb|CAR08970.2| conserved hypothetical protein; putative inner membrane protein
           [Escherichia coli ED1a]
 gi|218432954|emb|CAR13848.1| conserved hypothetical protein; putative inner membrane protein
           [Escherichia coli UMN026]
 gi|227835737|gb|EEJ46203.1| membrane protein [Escherichia coli 83972]
 gi|238860189|gb|ACR62187.1| conserved inner membrane protein [Escherichia coli BW2952]
 gi|242377960|emb|CAQ32729.1| conserved inner membrane structural protein [Escherichia coli
           BL21(DE3)]
 gi|253323793|gb|ACT28395.1| protein of unknown function DUF81 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974237|gb|ACT39908.1| conserved inner membrane protein [Escherichia coli B str. REL606]
 gi|253978404|gb|ACT44074.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
 gi|254593620|gb|ACT72981.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
           TW14359]
 gi|257760062|dbj|BAI31559.1| conserved predicted inner membrane protein [Escherichia coli
           O103:H2 str. 12009]
 gi|260448579|gb|ACX39001.1| protein of unknown function DUF81 [Escherichia coli DH1]
 gi|284922315|emb|CBG35400.1| putative membrane protein [Escherichia coli 042]
 gi|290763441|gb|ADD57402.1| Inner membrane protein yfcA [Escherichia coli O55:H7 str. CB9615]
 gi|291323494|gb|EFE62922.1| hypothetical protein ECCG_00812 [Escherichia coli B088]
 gi|291428001|gb|EFF01028.1| hypothetical protein ECGG_01147 [Escherichia coli FVEC1412]
 gi|291471152|gb|EFF13636.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298278918|gb|EFI20432.1| hypothetical protein ECFG_01207 [Escherichia coli FVEC1302]
 gi|299880810|gb|EFI89021.1| putative inner membrane protein [Escherichia coli MS 196-1]
 gi|300299133|gb|EFJ55518.1| putative inner membrane protein [Escherichia coli MS 185-1]
 gi|300316753|gb|EFJ66537.1| putative inner membrane protein [Escherichia coli MS 175-1]
 gi|300359191|gb|EFJ75061.1| putative inner membrane protein [Escherichia coli MS 198-1]
 gi|300396704|gb|EFJ80242.1| putative inner membrane protein [Escherichia coli MS 69-1]
 gi|300404301|gb|EFJ87839.1| putative inner membrane protein [Escherichia coli MS 84-1]
 gi|300408513|gb|EFJ92051.1| putative inner membrane protein [Escherichia coli MS 45-1]
 gi|300414314|gb|EFJ97624.1| putative inner membrane protein [Escherichia coli MS 115-1]
 gi|300451933|gb|EFK15553.1| putative inner membrane protein [Escherichia coli MS 116-1]
 gi|300458018|gb|EFK21511.1| putative inner membrane protein [Escherichia coli MS 21-1]
 gi|300530092|gb|EFK51154.1| putative inner membrane protein [Escherichia coli MS 107-1]
 gi|300841384|gb|EFK69144.1| putative inner membrane protein [Escherichia coli MS 124-1]
 gi|301074259|gb|EFK89065.1| putative inner membrane protein [Escherichia coli MS 146-1]
 gi|306908618|gb|EFN39115.1| protein of unknown function DUF81 [Escherichia coli W]
 gi|307554389|gb|ADN47164.1| conserved inner membrane protein [Escherichia coli ABU 83972]
 gi|308123497|gb|EFO60759.1| putative inner membrane protein [Escherichia coli MS 145-7]
 gi|315061620|gb|ADT75947.1| conserved inner membrane protein [Escherichia coli W]
 gi|315136962|dbj|BAJ44121.1| inner membrane protein yfcA [Escherichia coli DH1]
 gi|315255265|gb|EFU35233.1| putative inner membrane protein [Escherichia coli MS 85-1]
 gi|315292266|gb|EFU51618.1| putative inner membrane protein [Escherichia coli MS 153-1]
 gi|315615596|gb|EFU96228.1| conserved hypothetical protein [Escherichia coli 3431]
 gi|320174684|gb|EFW49817.1| putative membrane protein YfcA [Shigella dysenteriae CDC 74-1112]
 gi|320178698|gb|EFW53661.1| Putative membrane protein YfcA [Shigella boydii ATCC 9905]
 gi|320192048|gb|EFW66693.1| Putative membrane protein YfcA [Escherichia coli O157:H7 str.
           EC1212]
 gi|320196196|gb|EFW70820.1| Putative membrane protein YfcA [Escherichia coli WV_060327]
 gi|320199918|gb|EFW74507.1| Putative membrane protein YfcA [Escherichia coli EC4100B]
 gi|320641155|gb|EFX10634.1| hypothetical protein ECO5101_19525 [Escherichia coli O157:H7 str.
           G5101]
 gi|320646371|gb|EFX15294.1| hypothetical protein ECO9389_15044 [Escherichia coli O157:H- str.
           493-89]
 gi|320651641|gb|EFX20021.1| hypothetical protein ECO2687_02161 [Escherichia coli O157:H- str. H
           2687]
 gi|320657392|gb|EFX25194.1| hypothetical protein ECO7815_12138 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320662927|gb|EFX30251.1| hypothetical protein ECO5905_17973 [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320667671|gb|EFX34582.1| hypothetical protein ECOSU61_21871 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323162224|gb|EFZ48084.1| hypothetical protein ECE128010_1579 [Escherichia coli E128010]
 gi|323168500|gb|EFZ54180.1| hypothetical protein SS53G_0828 [Shigella sonnei 53G]
 gi|323170402|gb|EFZ56055.1| hypothetical protein ECLT68_5297 [Escherichia coli LT-68]
 gi|323377799|gb|ADX50067.1| protein of unknown function DUF81 [Escherichia coli KO11]
 gi|323940976|gb|EGB37163.1| inner membrane protein yfcA [Escherichia coli E482]
 gi|323944840|gb|EGB40906.1| inner membrane protein yfcA [Escherichia coli H120]
 gi|323961400|gb|EGB57011.1| inner membrane protein yfcA [Escherichia coli H489]
 gi|323970956|gb|EGB66207.1| inner membrane protein yfcA [Escherichia coli TA007]
 gi|324009248|gb|EGB78467.1| putative inner membrane protein [Escherichia coli MS 57-2]
 gi|324020850|gb|EGB90069.1| putative inner membrane protein [Escherichia coli MS 117-3]
 gi|326339680|gb|EGD63491.1| Putative membrane protein YfcA [Escherichia coli O157:H7 str. 1125]
 gi|326344142|gb|EGD67903.1| Putative membrane protein YfcA [Escherichia coli O157:H7 str. 1044]
 gi|331039767|gb|EGI11987.1| inner membrane protein YfcA [Escherichia coli H736]
 gi|331059644|gb|EGI31621.1| inner membrane protein YfcA [Escherichia coli TA143]
 gi|331069101|gb|EGI40493.1| inner membrane protein YfcA [Escherichia coli TA280]
 gi|332088459|gb|EGI93577.1| hypothetical protein SB521682_2709 [Shigella boydii 5216-82]
 gi|332090190|gb|EGI95289.1| hypothetical protein SD15574_2715 [Shigella dysenteriae 155-74]
 gi|332100873|gb|EGJ04219.1| inner membrane protein yfcA [Shigella sp. D9]
 gi|332344111|gb|AEE57445.1| conserved hypothetical protein [Escherichia coli UMNK88]
 gi|333002697|gb|EGK22257.1| hypothetical protein SFK272_3116 [Shigella flexneri K-272]
 gi|333016580|gb|EGK35910.1| hypothetical protein SFK227_2955 [Shigella flexneri K-227]
          Length = 269

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 75/182 (41%), Gaps = 13/182 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLGVLFFVAMLAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +  + ++  +L++ +V    L +   I  + +G+  
Sbjct: 65  SISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G   G F  L  +   G ++ KATA
Sbjct: 125 LLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATA 184

Query: 198 TS 199
            +
Sbjct: 185 HA 186


>gi|328952971|ref|YP_004370305.1| protein of unknown function DUF81 [Desulfobacca acetoxidans DSM
           11109]
 gi|328453295|gb|AEB09124.1| protein of unknown function DUF81 [Desulfobacca acetoxidans DSM
           11109]
          Length = 311

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/292 (17%), Positives = 91/292 (31%), Gaps = 58/292 (19%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+I    L G LSG+FGVGGG ++ P++       GI  +    VA  +    I   +  
Sbjct: 16  LVIGLGVLVGFLSGMFGVGGGFLLTPLMMMV----GIPPA----VAAASDSNQIVAAASS 67

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGI 139
               H R G ++ K+    +        +   ++  +         +   + +   L+G 
Sbjct: 68  GAFAHWRLGNVDFKLGLIILIGGITGGTIGVQLVKVLRSLGNFEFVMKVVYVLMLGLVGG 127

Query: 140 LML---------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
            M                                   +   +           +  G V 
Sbjct: 128 AMFIESLNTIRRSKAKTVEPVTSAQPKLTKVFSKLPFKMHFHRSGLHTSAIFPFGIGAVV 187

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G L+  LGVGGG      M++  G     A  T      L +    L + +         
Sbjct: 188 GVLAALLGVGGGFIMVPAMIYIIGMPTIVAIGTDLFQIVLTSANVTLQQAFVNKT----- 242

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                 V+I   LI+L  S +       +   +  + + I  ++I+   +  
Sbjct: 243 ------VDILLALILLAGSTIGAQFGALVGKRLKGEQIRILLAVIVLAMTAK 288



 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 47/122 (38%), Gaps = 8/122 (6%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             + G L+ L GVGGG +MVP +            +   VA+GT L  I  TS    ++ 
Sbjct: 184 GAVVGVLAALLGVGGGFIMVPAMIYII-------GMPTIVAIGTDLFQIVLTSANVTLQQ 236

Query: 90  -RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
              + T+++ +    +    I     +L+   +    +    A+  L M   +     + 
Sbjct: 237 AFVNKTVDILLALILLAGSTIGAQFGALVGKRLKGEQIRILLAVIVLAMTAKLFLDLVIE 296

Query: 149 CE 150
            +
Sbjct: 297 PD 298



 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 24/57 (42%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
           ++    G++ GFLSG  GVGGG     LM+  G     A A+ +      A      
Sbjct: 15  FLVIGLGVLVGFLSGMFGVGGGFLLTPLMMMVGIPPAVAAASDSNQIVAAASSGAFA 71


>gi|89095414|ref|ZP_01168327.1| hypothetical protein MED92_14193 [Oceanospirillum sp. MED92]
 gi|89080321|gb|EAR59580.1| hypothetical protein MED92_14193 [Oceanospirillum sp. MED92]
          Length = 249

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 82/230 (35%), Gaps = 25/230 (10%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
             F +G +  + G GGG++ +PVL            +    A+ T+       +  +   
Sbjct: 14  TGFAAGLIDAIAG-GGGMIALPVLLSC--------GLTPVEALATNKLQGTFGTFSAARY 64

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
             +   +++  ++  I    I  V  +L+I  +D SFL     +  + + +       + 
Sbjct: 65  FIKKRLVDLTQMRVQILCTFIGAVAGTLLIQMLDSSFLATLMPVLLITIAVYFTFSPNIS 124

Query: 149 CERK---FPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSA 204
            E K           + G   GF  G  G G G F  L  ++  G  + KATA +  ++ 
Sbjct: 125 DEEKKHRLGATGFGLVIGTSVGFYDGFFGPGTGTFFTLAYIVLAGYGMAKATAHTKVLNF 184

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
                +L+     G  +              A L++    ++   L  KL
Sbjct: 185 TSNIASLVFFAIGGHMV------------WMAGLVMAIGQLIGGRLGAKL 222


>gi|325282353|ref|YP_004254894.1| hypothetical protein Deipr_0102 [Deinococcus proteolyticus MRP]
 gi|324314162|gb|ADY25277.1| protein of unknown function DUF81 [Deinococcus proteolyticus MRP]
          Length = 253

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 81/232 (34%), Gaps = 19/232 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL            +   +A+  SL ++   S+   + + R   ++ + +  +     
Sbjct: 28  VPVLVYL-------AGVEEKLAIAQSLAIVGGISLFGAIPYIRSKQVDWRSVVLFGIPGV 80

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE--RKFPDNYVKYIWGMVT 166
           + T   + + S++  +     FA   +L  ++M +      E              G+  
Sbjct: 81  LGTYAGAALSSYLSGAVQLMLFAAVMILAAVMMFRPKPADPEGDTHERSPLKIGAEGLGV 140

Query: 167 GFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G L+G +GVGGG      ++   G  +  A  TS  + A  +F       Y+        
Sbjct: 141 GILTGLVGVGGGFLIIPALVLLGGLPMSLAVGTSLLIIAAKSFAG--FYKYAHLLGLENM 198

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            W+L    IG    I         L + +   +  + L  GF++ +      
Sbjct: 199 DWTL----IGTFTAIGVAGSF---LGSVIGKKVSNEALRRGFAIFLVLMGLY 243



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 10/123 (8%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G L+GL GVGGG +++P L            + M +A+GTSL +IA  S   F ++
Sbjct: 137 GLGVGILTGLVGVGGGFLIIPALVLL-------GGLPMSLAVGTSLLIIAAKSFAGFYKY 189

Query: 90  RRH---GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
                   ++  ++  +  +    + + S++   V    L + FAIF +LMG+ +L  + 
Sbjct: 190 AHLLGLENMDWTLIGTFTAIGVAGSFLGSVIGKKVSNEALRRGFAIFLVLMGLYVLGTNL 249

Query: 147 LYC 149
              
Sbjct: 250 PKV 252


>gi|315452850|ref|YP_004073120.1| inner membrane protein YfcA [Helicobacter felis ATCC 49179]
 gi|315131902|emb|CBY82530.1| inner membrane protein YfcA [Helicobacter felis ATCC 49179]
          Length = 252

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 96/252 (38%), Gaps = 25/252 (9%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           +F +G +  + G GGGL+ +P L      +GI      H+A+ T+    +  S  + +  
Sbjct: 15  AFCAGLVDSIAG-GGGLITMPTLL----ALGIPP----HLALATNKLQSSFGSFTATLNF 65

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
              G ++++ +   +  + +   + + +I  +    L     IF  L+ I  L   ++  
Sbjct: 66  CLKGMVSLREIAFGVGCVVVGAGLGTTLILWLKADILRLLIPIFLSLIFIYTLLAPKVGE 125

Query: 150 ERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSAL 205
               P         I+G+  GF  G  G G G F   +M+   G ++ KATA +   +  
Sbjct: 126 GDSHPKIKPTLFYAIFGLGLGFYDGFFGPGTGSFWTFVMVALLGLNMKKATAHTKVFNFT 185

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
               +L V +  G             V     L++    +L   + + L      K++  
Sbjct: 186 SNIISLSVFLIGGQ------------VIWVVGLLMGCGQMLGAWVGSNLVMAKEVKFIRR 233

Query: 266 GFSMIMFTTSFV 277
            F  ++  T   
Sbjct: 234 VFLCVVGATILK 245


>gi|330952870|gb|EGH53130.1| hypothetical protein PSYCIT7_16159 [Pseudomonas syringae Cit 7]
          Length = 261

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 52/273 (19%), Positives = 100/273 (36%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +VA  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   FVVAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + HRR+  I+ K+            ++T   +S +        + + +A     LL  +
Sbjct: 60  VLVHRRNDNIDWKVTGLLTLGSVPAVLMTLWFLSTLHTAPEALNAIIKQALGYVLLLTAL 119

Query: 140 LMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + +L                     +  I G++ G +     +G G      L +L
Sbjct: 120 AVLFKKKLLAFAHRRGDGYSFFSGTSLTVLTVITGLILGTMVALTSIGAGALGTVALFIL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +              + GL   S+G +N   +  +L  S+ 
Sbjct: 180 YPLLPTRRLVGTEIAHAVPLTL------------VAGLGHASMGNMNWELLGWLLMGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + ++  +    L    ++++ T  F  A
Sbjct: 228 GIYLGSHMAGRVSDDLLRPFLAIMLGTIGFKLA 260



 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 44/120 (36%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 148 VLTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G +N ++L   +        + S M   V    L    AI    +G  +  
Sbjct: 202 VAGLGHASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDDLLRPFLAIMLGTIGFKLAF 261



 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                 + G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 4   GGLGFVVAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 61


>gi|260219769|emb|CBA26631.1| hypothetical protein Csp_H39570 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 254

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 95/264 (35%), Gaps = 27/264 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +AS L+G +  + G GGGL++ P L   F               GT+ G     +
Sbjct: 3   LLIASLASGLAGFIDSIVG-GGGLILTPALFALFPTAHPATL------FGTNKGAAVAGT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + + + R  ++  + L     V     +  + +++ +   +L KA     +L+    L
Sbjct: 56  AFAAVRYNRQVSLPWRALLPATLVCFAAALSGAWLVTQISPQYLRKALPFILVLVLGYTL 115

Query: 143 KRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKA 195
            +  L      P    +         G   GF  G  G G G F   L++   G     A
Sbjct: 116 AKKEL-GRHHLPQFSGRKEVFMACAIGGGIGFYDGFFGPGTGSFFVFLLVRVLGYDFLHA 174

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +A +  ++      AL++   +            G V    V+++   +++ +   T L+
Sbjct: 175 SAGAKLLNTASNSAALVLFTLT------------GHVWWHYVVVMAVANVIGSLAGTHLA 222

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G  ++   F  ++       A
Sbjct: 223 LKHGTGFVRSVFIAVVSALILKTA 246


>gi|120609007|ref|YP_968685.1| hypothetical protein Aave_0304 [Acidovorax citrulli AAC00-1]
 gi|120587471|gb|ABM30911.1| protein of unknown function DUF81 [Acidovorax citrulli AAC00-1]
          Length = 252

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 92/253 (36%), Gaps = 25/253 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +AS L+G +  + G GGGL++VP L   F       +      +GT+       + 
Sbjct: 4   IIVSLASLLAGFVDAIVG-GGGLILVPALFATF------PNAPPATLLGTNKSGSIWGTA 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++  ++ R   I  + L              +  ++ V   FL +      L + +  L 
Sbjct: 57  IATWQYSRRVQIRWQSLLPAAAAGFAGGFAGAWTVTVVPVDFLRRILPFILLAVLLYTLA 116

Query: 144 RDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATA 197
           R  L            +  +  + G+  GF  G  G G G F   L +   G     A+A
Sbjct: 117 RKDLGKHHAPRFEGAAETRMACLIGLAIGFYDGFFGPGTGSFFVFLFVRLLGYDFLNASA 176

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           ++  ++      AL++    G             V     L +   +++ + L T ++  
Sbjct: 177 SAKLLNLATNVAALILFTAKGQ------------VWWHFALPLAVANVVGSVLGTHMAMK 224

Query: 258 IGKKYLTIGFSMI 270
            G  ++   F ++
Sbjct: 225 HGTGFVRGIFILV 237


>gi|49483955|ref|YP_041179.1| hypothetical protein SAR1792 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|282904284|ref|ZP_06312172.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           C160]
 gi|282906109|ref|ZP_06313964.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909024|ref|ZP_06316842.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911340|ref|ZP_06319142.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282919477|ref|ZP_06327212.1| hypothetical protein SASG_00783 [Staphylococcus aureus subsp.
           aureus C427]
 gi|283958464|ref|ZP_06375915.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|295428284|ref|ZP_06820913.1| hypothetical protein SIAG_01608 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297590753|ref|ZP_06949391.1| membrane protein [Staphylococcus aureus subsp. aureus MN8]
 gi|49242084|emb|CAG40783.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|282317287|gb|EFB47661.1| hypothetical protein SASG_00783 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282325035|gb|EFB55345.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327288|gb|EFB57583.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331401|gb|EFB60915.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595902|gb|EFC00866.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           C160]
 gi|283470980|emb|CAQ50191.1| transporter [Staphylococcus aureus subsp. aureus ST398]
 gi|283790613|gb|EFC29430.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|295127684|gb|EFG57321.1| hypothetical protein SIAG_01608 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297575639|gb|EFH94355.1| membrane protein [Staphylococcus aureus subsp. aureus MN8]
 gi|312437829|gb|ADQ76900.1| membrane protein [Staphylococcus aureus subsp. aureus TCH60]
 gi|315195618|gb|EFU26005.1| hypothetical protein CGSSa00_08125 [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 256

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +II+  F++  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   LTMIIIIILFGFIAAFIDSVVG-GGGLISTPALLAI--------GLPPSVALGTNKLASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+ S ++  R G +++ ++      + + +   + + + V    L     I    + I
Sbjct: 56  FGSLTSAIKFIRSGKVDLYVVAKLFGFVFLASACGAYIATMVPSQILKPLIIIALSSVFI 115

Query: 140 LMLKRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             L +      R      F    +     ++ GF  G +G G G F   ++L +G     
Sbjct: 116 FTLLKKDWGNTRTFTQFTFKKAILFAALFILIGFYDGFVGGGTGSFMLFVLLIFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A   +  ++      AL++ +  G
Sbjct: 176 AAGNAKVLNFASNIGALVLFMVLG 199


>gi|254523425|ref|ZP_05135480.1| hypothetical protein SSKA14_2558 [Stenotrophomonas sp. SKA14]
 gi|219721016|gb|EED39541.1| hypothetical protein SSKA14_2558 [Stenotrophomonas sp. SKA14]
          Length = 262

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 89/263 (33%), Gaps = 25/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++V +F++G +    G GGGLV +P L                +  GT+       +
Sbjct: 12  LWWLVVIAFIAGLVDAAVG-GGGLVQLPGLFTVLPQQ------TPAMLFGTNKFSSMFGT 64

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R+     K +        I +   +  +S + K  +     +  + M    L
Sbjct: 65  GAAAWRYARNVRFPWKPVLFAAGTAFIFSFAGATAVSLLPKDAVRPLVLVLLIAMLAYTL 124

Query: 143 KRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +       +       +  +    G   GF  G  G G G     L + F+G    +A+
Sbjct: 125 WKKDFGALHRPQEIGRRELVIALAIGAAIGFYDGFFGPGTGSFLIFLFVRFFGLDFLRAS 184

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A S  V+      A+   + +            G +     L +   +I+ + + T+L+ 
Sbjct: 185 AASKVVNLATNVAAISFFVPT------------GNILWLFALPMAAANIIGSVVGTRLAL 232

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F  ++       A
Sbjct: 233 KGGTPFIRKLFVGLVVVLIARMA 255


>gi|86751708|ref|YP_488204.1| hypothetical protein RPB_4610 [Rhodopseudomonas palustris HaA2]
 gi|86574736|gb|ABD09293.1| Protein of unknown function DUF81 [Rhodopseudomonas palustris HaA2]
          Length = 307

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 92/286 (32%), Gaps = 56/286 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + LI+      G +SG+FGVGGG ++ P+L            I   V
Sbjct: 1   MQLYLPIADLPVNVLLILAMGAAVGFVSGMFGVGGGFLLTPLLIFV--------GIAPAV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ +    +A +S    + + R   I+  +    +      T +       +        
Sbjct: 53  AVASVTSHMAASSFSGALSYWRRRAIDPMLAFVLLCGGIAGTALGVWFFVLMRSIGQLDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            +  A+ +    +G LM+                                + R    + +
Sbjct: 113 TIALAYVVLLTGVGGLMVYEGLRAILRTRRGEVALSGRTGNRNWIHALPLKIRFKRSKMY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALL 212
                    G++ GF+   +GVGGG     ++++           TS  ++ +    A +
Sbjct: 173 LSVIPVVTIGLLIGFIGAVMGVGGGFILVPMLIYLLRVPTSMVVGTSMVLTLVTMLIATI 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +   +   ++ +             L+++   +       +    I
Sbjct: 233 LHAATNHLVDAVLA-----------LMLMIGGVTGAQFGARAGQRI 267



 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 39/103 (37%), Gaps = 8/103 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++    L G +  + GVGGG ++VP+L    +       +   + +GTS+ +   T 
Sbjct: 175 VIPVVTIGLLIGFIGAVMGVGGGFILVPMLIYLLR-------VPTSMVVGTSMVLTLVTM 227

Query: 83  VMSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +++ + H      ++  +    +          +     +   
Sbjct: 228 LIATILHAATNHLVDAVLALMLMIGGVTGAQFGARAGQRIRSE 270


>gi|159184831|ref|NP_354586.2| hypothetical protein Atu1591 [Agrobacterium tumefaciens str. C58]
 gi|159140115|gb|AAK87371.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 267

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 74/207 (35%), Gaps = 13/207 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           +D  ++   ++   +  +G +  + G GGGL+ +P +            I     +GT+ 
Sbjct: 2   QDIALNVFIVLFCVAIFAGFIDSIAG-GGGLITIPAMMIM--------GIAPLDTLGTNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 S  + + + R G +N+K       +     ++ +L  + V    L        +
Sbjct: 53  LQAQFGSASATLAYARRGHVNLKEQLPMGLMAMAGGMLGALTAAFVPADLLRTIMPFLLI 112

Query: 136 LMGILMLKRDRLY---CERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGAS 191
            + +    + +L      R+        +   + GF  G  G G G F     +   G  
Sbjct: 113 TIALYFALKPQLSDIDSHRRITPFVFGLMVAPLIGFYDGVFGPGAGSFYMLAFVALAGFG 172

Query: 192 IYKATATSAGVSALIAFPALLVRIYSG 218
           + KATA +  ++    F   +V    G
Sbjct: 173 MLKATAHTKLLNLGSNFGGFVVFAMGG 199


>gi|69247395|ref|ZP_00604339.1| Protein of unknown function DUF81 [Enterococcus faecium DO]
 gi|258617140|ref|ZP_05714910.1| hypothetical protein EfaeD_15731 [Enterococcus faecium DO]
 gi|68194867|gb|EAN09340.1| Protein of unknown function DUF81 [Enterococcus faecium DO]
          Length = 258

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 103/258 (39%), Gaps = 24/258 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +  +   L+ T+  + G+GGG+++ P+         I       ++  +++ V   + V 
Sbjct: 5   IYFIVIVLANTVGAVSGMGGGVLIKPIFDF------IGAHSVAAISFYSTVAVFTMSLVS 58

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-------DKSFLNKAFAIFCLLM 137
           +  +      I+ +I+        +  ++ ++   H+       D+  + + F     L+
Sbjct: 59  TARQLASGRKIHWQIVLWVSGGAVLGGILGNVAFDHLLLLFQNEDEVQMIQIFLTVVTLL 118

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKAT 196
                 +       +  +N+     G+V GFL+  LG+GGG     LLML +   I +AT
Sbjct: 119 FAFFYTKYDW-PGFQLKNNFWYCFCGLVLGFLASLLGIGGGPINVSLLMLMFALPIKEAT 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S           ++    +G    GL         +  +  ++P +I+   L  K+S 
Sbjct: 178 VYSICTIFFSQLAKIVT--IAGTTGFGLYD-------LKILWFVIPAAIVGGLLGAKVST 228

Query: 257 MIGKKYLTIGFSMIMFTT 274
           ++  + +T+ F  ++F  
Sbjct: 229 VLSPQKVTLVFQTVIFLV 246



 Score = 40.4 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 10/123 (8%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
                  + G L+ L G+GGG + V +L   F       ++ +  A   S+  I  + + 
Sbjct: 138 WYCFCGLVLGFLASLLGIGGGPINVSLLMLMF-------ALPIKEATVYSICTIFFSQLA 190

Query: 85  SFMEHRR---HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             +        G  ++KIL   I    +  ++ + + + +    +   F     L+ I+ 
Sbjct: 191 KIVTIAGTTGFGLYDLKILWFVIPAAIVGGLLGAKVSTVLSPQKVTLVFQTVIFLVLIIN 250

Query: 142 LKR 144
           L  
Sbjct: 251 LYN 253


>gi|283955073|ref|ZP_06372576.1| putative membrane protein [Campylobacter jejuni subsp. jejuni 414]
 gi|283793440|gb|EFC32206.1| putative membrane protein [Campylobacter jejuni subsp. jejuni 414]
          Length = 254

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 57/263 (21%), Positives = 93/263 (35%), Gaps = 28/263 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y  ++ V +  +G +  + G GGGL+ +P L            I  H+++ T+       
Sbjct: 10  YYFILFVVALFAGFIDSIVG-GGGLITLPALIAC--------GIPAHLSLATNKLQSVFG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + + + +  T  +  L   IF   I   + S  +  V    L     IF  L  +  
Sbjct: 61  SFTATLTYFKSTT--LPHLAWGIFFTAIGAGIGSYGVLFVKDEQLKLIILIFLTLTFLYT 118

Query: 142 LKRDRLYCERKFPD----NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
             R  L      P          I G+  GF  G LG G G F     +   G ++ KA 
Sbjct: 119 ALRPNLGKHESKPKLKNIKIFHLICGLTLGFYDGFLGPGTGSFWIFACVMLLGFNMRKA- 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S     L     ++      W    L  W++G       L++    +L   L +KL  
Sbjct: 178 --SINTKILNFTSNIIALAIFLWQYELL--WAIG-------LLMGIGQVLGAYLGSKLVL 226

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
               K++   F +I+  T    A
Sbjct: 227 KTNGKFIKTLFLIIVGATIIKVA 249


>gi|322436254|ref|YP_004218466.1| protein of unknown function DUF81 [Acidobacterium sp. MP5ACTX9]
 gi|321163981|gb|ADW69686.1| protein of unknown function DUF81 [Acidobacterium sp. MP5ACTX9]
          Length = 279

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 54/286 (18%), Positives = 103/286 (36%), Gaps = 46/286 (16%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V++  LI VAS L+G L  L G+GGG+V+VP+L+  F+       + +H A+G SL  + 
Sbjct: 4   VEFSVLIGVASLLAGFLGSLTGLGGGVVIVPLLALGFK-------VDIHYAIGASLVSVI 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  S     R G  N++I            +V + + +      +   F +  +   +
Sbjct: 57  ATSCGSAGSFLREGYSNIRIGMLLEVATTTGAIVGAFLAAGTPTKAIAIVFGLVLIASAV 116

Query: 140 LMLKRDRLYCERKFPDN--------------------------YVKYIWGMVTGFLSGAL 173
           + L++ + +      D                            + +      G LSG L
Sbjct: 117 ISLRKKKPHANDDVKDPIATALKLNGSYPLPAGGRQAYNVRRVPLGFSLMFGAGALSGLL 176

Query: 174 GVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G G    L M          +T TS  +  + A  +  + +  G+            +
Sbjct: 177 GIGSGAVKVLAMDEAMLIPFKVSTTTSNFMIGVTAAASAGIYLSRGYIDPV--------I 228

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                L ++  S++      +         + I F++++       
Sbjct: 229 AFPVTLGVVAGSLIGARFLVRA----KTSAIRIVFAVVICLLGLEM 270



 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G LSGL G+G G V V         M     I   V+  TS  +I  T+  S   + 
Sbjct: 167 FGAGALSGLLGIGSGAVKV-------LAMDEAMLIPFKVSTTTSNFMIGVTAAASAGIYL 219

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I+  I       +   +++ +  +     S +   FA+   L+G+ M+  
Sbjct: 220 SRGYIDPVIAFPVTLGVVAGSLIGARFLVRAKTSAIRIVFAVVICLLGLEMIYS 273


>gi|256619334|ref|ZP_05476180.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|256598861|gb|EEU18037.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|323480997|gb|ADX80436.1| conserved hypothetical protein [Enterococcus faecalis 62]
          Length = 258

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 102/258 (39%), Gaps = 24/258 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +  +   L+ T+  + G+GGG+++ P+         I       ++  +++ V   + V 
Sbjct: 5   VYFIVIVLANTVGAVSGMGGGVLIKPIFDF------IGAHSVAAISFYSTVAVFTMSLVS 58

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-------DKSFLNKAFAIFCLLM 137
           +  +      IN +I+        +  ++ ++   H+       D+  + + F     L+
Sbjct: 59  TARQLASGRKINWQIVLWVSGGAVLGGILGNVAFDHLLLLFQNEDEVQMIQIFLTVVTLL 118

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKAT 196
                 +       +   N+     G+V GFL+  LG+GGG     LLML +   I +AT
Sbjct: 119 FAFFYTKYDW-PGFQLKKNFWYCFCGLVLGFLASLLGIGGGPINVSLLMLMFALPIKEAT 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S           ++    +G    GL         +  +  ++P +I+   L  K+S 
Sbjct: 178 VYSICTIFFSQLAKIVT--IAGTTGFGLYD-------LKILWFVIPAAIVGGLLGAKVST 228

Query: 257 MIGKKYLTIGFSMIMFTT 274
           ++  + +T+ F  ++F  
Sbjct: 229 VLSPQKVTLVFQTVIFLV 246



 Score = 40.4 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 10/123 (8%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
                  + G L+ L G+GGG + V +L   F       ++ +  A   S+  I  + + 
Sbjct: 138 WYCFCGLVLGFLASLLGIGGGPINVSLLMLMF-------ALPIKEATVYSICTIFFSQLA 190

Query: 85  SFMEHRR---HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             +        G  ++KIL   I    +  ++ + + + +    +   F     L+ I+ 
Sbjct: 191 KIVTIAGTTGFGLYDLKILWFVIPAAIVGGLLGAKVSTVLSPQKVTLVFQTVIFLVLIIN 250

Query: 142 LKR 144
           L  
Sbjct: 251 LYN 253


>gi|81299744|ref|YP_399952.1| hypothetical protein Synpcc7942_0935 [Synechococcus elongatus PCC
           7942]
 gi|81168625|gb|ABB56965.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 256

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 72/238 (30%), Gaps = 31/238 (13%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL            I    A+  +L V+   S++  + H R G I+      +     +
Sbjct: 29  PVLVYVL-------DIDPKTAIAMTLVVVGSASLLGAIPHARRGNIDWLRTGVFGSSTMV 81

Query: 110 TTVVTSLMI--SHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
                + +     V        FA+  L     ML       +         +     T 
Sbjct: 82  GAFGGARLALLPWVTAQLQMGLFAVAILAAASFMLWPQSPKADDPVLSYPRPFCLSCWTW 141

Query: 168 FLSGALGVGGG----------IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
            +S  +GVG                 L+L     + KA  TS  +  L A   L+     
Sbjct: 142 LISEGIGVGVLTGLVGVGGGFAIVPALVLLGKVPMRKAIGTSLVIIGLNAIAGLMGY--- 198

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            WG   LP         G  L     + L T L   +S  +  + L   F++++    
Sbjct: 199 -WGRLSLP--------WGLTLTFAASACLGTLLGGAVSQRLSTQGLQRSFALLLLAIG 247



 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 40/100 (40%), Gaps = 7/100 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
             +VP L            + M  A+GTSL +I   ++   M +    ++   +   +  
Sbjct: 162 FAIVPALVLL-------GKVPMRKAIGTSLVIIGLNAIAGLMGYWGRLSLPWGLTLTFAA 214

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              + T++   +   +    L ++FA+  L +G  +L R 
Sbjct: 215 SACLGTLLGGAVSQRLSTQGLQRSFALLLLAIGGFVLARS 254


>gi|15893538|ref|NP_346887.1| permease [Clostridium acetobutylicum ATCC 824]
 gi|15023081|gb|AAK78227.1|AE007537_12 Conserved membrane protein, predicted permease [Clostridium
           acetobutylicum ATCC 824]
 gi|325507657|gb|ADZ19293.1| Conserved membrane protein, predicted permease [Clostridium
           acetobutylicum EA 2018]
          Length = 120

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    +  V   ++G LSGLFG+GGG+V++P L        I        A GTSL  + 
Sbjct: 1   MSEFIIYAVIGIVAGVLSGLFGIGGGVVIIPALVMFAGFSQIK-------AQGTSLIAML 53

Query: 80  P-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           P   + +FM++ + G  ++         + I       + + +  S L KAF +F +L+G
Sbjct: 54  PPVGIFAFMQYYKKGNTDIYAGIVICIAMVIAARFGGQLANILPVSVLKKAFGVFIILVG 113

Query: 139 ILMLKRD 145
           I  +   
Sbjct: 114 IKTIFGK 120



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 48/127 (37%), Gaps = 14/127 (11%)

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSA-GVSALIAFPA 210
             +  +  + G+V G LSG  G+GGG+     ++ + G S  KA  TS   +   +   A
Sbjct: 1   MSEFIIYAVIGIVAGVLSGLFGIGGGVVIIPALVMFAGFSQIKAQGTSLIAMLPPVGIFA 60

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            +              +  G  +I A ++I    ++      +L+ ++    L   F + 
Sbjct: 61  FMQY------------YKKGNTDIYAGIVICIAMVIAARFGGQLANILPVSVLKKAFGVF 108

Query: 271 MFTTSFV 277
           +      
Sbjct: 109 IILVGIK 115


>gi|303242597|ref|ZP_07329073.1| protein of unknown function DUF81 [Acetivibrio cellulolyticus CD2]
 gi|302589854|gb|EFL59626.1| protein of unknown function DUF81 [Acetivibrio cellulolyticus CD2]
          Length = 117

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 7/118 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+    +G  +GLFG GGG + VP +           +   H A  T++ +I P +V+S
Sbjct: 7   YILIGLATGLANGLFGSGGGTIAVPAMVLLL-------NEEEHKAHATAISIILPLTVVS 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + +  +  IN  +    +    I   + + +++    + L K FA+F +   I M+ 
Sbjct: 60  AILYMSNNFINWNLTAKVMIGGIIGGYIGAKLLNICPSNILRKIFAVFMIAAAIRMIL 117



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 13/120 (10%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            + G+ TG  +G  G GGG      M L      +KA AT+  +   +   + ++ + + 
Sbjct: 8   ILIGLATGLANGLFGSGGGTIAVPAMVLLLNEEEHKAHATAISIILPLTVVSAILYMSNN 67

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                       F+N      ++   I+   +  KL  +     L   F++ M   +   
Sbjct: 68  ------------FINWNLTAKVMIGGIIGGYIGAKLLNICPSNILRKIFAVFMIAAAIRM 115


>gi|149280630|ref|ZP_01886744.1| hypothetical protein PBAL39_17149 [Pedobacter sp. BAL39]
 gi|149228614|gb|EDM34019.1| hypothetical protein PBAL39_17149 [Pedobacter sp. BAL39]
          Length = 277

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 99/275 (36%), Gaps = 44/275 (16%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +  +  ++++ ++ +G L  L G+GGG++++P+L+  F        + +  A+G +L  
Sbjct: 2   TIFLFSIILLIGAYFAGLLGSLTGLGGGVIVIPLLTLVF-------GVDIRYAIGAALLA 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
              TS  S   + + G  N+++         I  V  +L+  +   + +   F +  L  
Sbjct: 55  SIATSSGSATAYVKEGITNIRLGMFLEIATTIGAVGGALIAVYTPTNTIAILFGVILLFS 114

Query: 138 GILMLKRDRLYC------------------------ERKFPDNYVKYIWGMVTGFLSGAL 173
             + L++                             + K  +    +      G +SG L
Sbjct: 115 AAMTLRKKNEAALTEGSKLSYLLKLNSSYPTKEGIVQYKLKNIGGGFSIMAFAGVISGLL 174

Query: 174 GVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G G    L M          +T TS  +  + A  + +V +  G+   G+        
Sbjct: 175 GIGSGALKVLAMDTVMRIPFKVSTTTSNFMIGVTAAASAVVYLQRGYMDPGI-------- 226

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
                  ++   +      +KL   +  + L I F
Sbjct: 227 ----AFPVILGVLGGAITGSKLLTRMNTRVLKIIF 257



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
             +G +SGL G+G G + V  +    +       I   V+  TS  +I  T+  S + + 
Sbjct: 165 AFAGVISGLLGIGSGALKVLAMDTVMR-------IPFKVSTTTSNFMIGVTAAASAVVYL 217

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + G ++  I    I  +    +  S +++ ++   L   F    + +   M+  
Sbjct: 218 QRGYMDPGIAFPVILGVLGGAITGSKLLTRMNTRVLKIIFCTAIVFIATEMIYN 271


>gi|148978027|ref|ZP_01814574.1| hypothetical protein VSWAT3_02031 [Vibrionales bacterium SWAT-3]
 gi|145962711|gb|EDK27985.1| hypothetical protein VSWAT3_02031 [Vibrionales bacterium SWAT-3]
          Length = 247

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 81/215 (37%), Gaps = 16/215 (7%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M     D  +  +  ++V++F +G +  + G GGGL++VP    +F L G+       +A
Sbjct: 1   MELFGNDITLFILIALMVSAFAAGFIDAVAG-GGGLILVP----SFILAGLPP----QLA 51

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +G    V    +V +     R+  +    +   I    I     +  I + D   + K  
Sbjct: 52  LGQEKIVSTLGTVAAIRNFIRNKKVIWTAVATGIPAGLIGAYAGAQAILYFDPDTIGKII 111

Query: 131 AIFCLLMGILMLKRDRLYCER-KFPDNYVKYIWG-----MVTGFLSGALGVGGGIFTNLL 184
                   IL     +   E    P N    ++G      V GF  G  G G G F  L 
Sbjct: 112 LFMLPFGIILSFIPKKNRSEDNSSPINKTIILFGVPTAVFVIGFYDGFFGPGTGSFLILA 171

Query: 185 MLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
           + +     +  A+ATS   +      AL+  + +G
Sbjct: 172 LHYLLRFDLVSASATSKLFNFSSNIGALIAFMIAG 206


>gi|257075827|ref|ZP_05570188.1| hypothetical protein Faci_02119 [Ferroplasma acidarmanus fer1]
          Length = 331

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 56/287 (19%), Positives = 93/287 (32%), Gaps = 52/287 (18%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              I+  S ++G +  L G+GGG V+VPVL+  +        I    A G SL     TS
Sbjct: 10  FLTIVFGSIIAGFIGSLTGLGGGTVLVPVLTLFY-------GIPFIFAAGASLISTIATS 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK----AFAIFCLLMG 138
             S   + +    N+KI            +V SL +  +DK  L       F +  L   
Sbjct: 63  AGSASAYTKKKIANIKIGIGLEIATTTGAIVGSLTLVFIDKHALIWSVYVIFGLVLLFSL 122

Query: 139 ILMLKRDRLYCERKFP----------------------------DNYVKYIWGMVTGFLS 170
           I  +K+       +                                ++  I     GF+S
Sbjct: 123 IPTIKKIGKEVPPETKPDWSTKLFQLTGSYYDERLRKTIKYHGIRWWLGEIVMFFAGFVS 182

Query: 171 GALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G LG+G G    L M +     +   T +S  +  + A     +             W  
Sbjct: 183 GLLGIGSGALKVLGMDWAMNLPMKVTTTSSNFMIGITAATGSSIY------------WYE 230

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           G++N+          ++      K+   I  + +   F  I+    F
Sbjct: 231 GYINLFIAAATAIGVLIGAFFGAKVLVKISNENIRWIFFAILSFLGF 277



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +  F +G +SGL G+G G + V  +  A        ++ M V   +S  +I  T+ 
Sbjct: 169 WLGEIVMFFAGFVSGLLGIGSGALKVLGMDWAM-------NLPMKVTTTSSNFMIGITAA 221

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +   G IN+ I       + I     + ++  +    +   F      +G  M+ 
Sbjct: 222 TGSSIYWYEGYINLFIAAATAIGVLIGAFFGAKVLVKISNENIRWIFFAILSFLGFDMVF 281

Query: 144 R 144
           +
Sbjct: 282 K 282


>gi|66047449|ref|YP_237290.1| hypothetical protein Psyr_4222 [Pseudomonas syringae pv. syringae
           B728a]
 gi|63258156|gb|AAY39252.1| Protein of unknown function DUF81 [Pseudomonas syringae pv.
           syringae B728a]
          Length = 261

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 101/273 (36%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            ++A  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   FVIAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + HR++  I+ K+            ++T   +S +        + + +A     LL  +
Sbjct: 60  VLVHRKNDNIDWKVTGLLTLGSVPAVLMTLWFLSTLHTAPEALNAIIKQALGFVLLLTAL 119

Query: 140 LMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + +L       +             +  I G++ G +     +G G      L +L
Sbjct: 120 AVLFKKKLLAFAHRREDGYSFFSGTSLTVLTVITGLILGTMVALTSIGAGALGTVALFIL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +              + GL   S+G +N   +  +L  S+ 
Sbjct: 180 YPLLPTRRLVGTEIAHAVPLTL------------VAGLGHASMGNMNWELLGWLLMGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + ++  +    L    ++++ T  F  A
Sbjct: 228 GIYLGSHMAGRVSDDLLRPFLAIMLGTIGFKLA 260



 Score = 42.0 bits (98), Expect = 0.095,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 44/120 (36%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 148 VLTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G +N ++L   +        + S M   V    L    AI    +G  +  
Sbjct: 202 VAGLGHASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDDLLRPFLAIMLGTIGFKLAF 261



 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 27/58 (46%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                 I G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 4   GGLGFVIAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 61


>gi|257056318|ref|YP_003134150.1| putative permease [Saccharomonospora viridis DSM 43017]
 gi|256586190|gb|ACU97323.1| predicted permease [Saccharomonospora viridis DSM 43017]
          Length = 303

 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 74/204 (36%), Gaps = 15/204 (7%)

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T++ S + H R   I+ + +        +  V+ + +++ +   F      +  LL+G  
Sbjct: 54  TALASGVAHWRFRNIDWRTVGILAAPGAVGAVLGAYVLTSLPMGFAEVWITLVLLLLGCY 113

Query: 141 MLKRDRLYCER------KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIY 193
           +L R   + +       + P        G+V GF+  + G G G      +L  G     
Sbjct: 114 VLVRFAFFHKPGALVGARRPSTRFLGPLGLVAGFVDASGGGGWGPVATTTLLSSGRLEPR 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           K   +      L+A  A L  ++S    + L        N   V  ++   ++  PLA  
Sbjct: 174 KVIGSVDTSEFLVALAASLGFLFSLSQEDQL--------NYTVVAGLMLGGVVAAPLAAW 225

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           L   +  + L      ++  T+  
Sbjct: 226 LVRRLPPRVLGAAAGGLIVFTNAR 249


>gi|86357776|ref|YP_469668.1| hypothetical protein RHE_CH02158 [Rhizobium etli CFN 42]
 gi|86281878|gb|ABC90941.1| hypothetical conserved membrane protein [Rhizobium etli CFN 42]
          Length = 262

 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 95/275 (34%), Gaps = 38/275 (13%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  L  ++    G L G+ GVGGG +M P+L   F        +    A+GT L   A
Sbjct: 1   MTFEPLYSLSGLFVGALVGITGVGGGSLMTPLLVLLF-------GVHPATAVGTDLLYAA 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIF 133
            T       H  HG +N KI+           ++   +++ VD       + +  A    
Sbjct: 54  ITKTAGTAVHGIHGRVNWKIVSSLAAGSVPAALLMLWVLAGVDRKSIGVTNTITVALGWL 113

Query: 134 CLLMGILMLKRDRL-----------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++  I+++ R  +              R      +  I G   G L     VG G    
Sbjct: 114 LIMTAIMLVFRGSILELARRAIGHRTPPRPTTILILTVILGFCLGVLVTLTSVGAGALGV 173

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
            ++L      ++ +   +    +  +                    W +G ++   +  +
Sbjct: 174 TILLALYPRLNVREIVGSDIVHAVPLTLIGGSGY------------WLIGEIDWAMLFAL 221

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           L  SI    + + L+  + ++ + I  ++ +   +
Sbjct: 222 LVGSIPGIVIGSLLAPKLHERTIRIVLAVTLAVVA 256



 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 48/122 (39%), Gaps = 6/122 (4%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + L ++  F  G L  L  VG G + V +L   +  + + +       +G+ +    P
Sbjct: 145 TILILTVILGFCLGVLVTLTSVGAGALGVTILLALYPRLNVREI------VGSDIVHAVP 198

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +++    +   G I+  +L   +       V+ SL+   + +  +    A+   ++   
Sbjct: 199 LTLIGGSGYWLIGEIDWAMLFALLVGSIPGIVIGSLLAPKLHERTIRIVLAVTLAVVAWK 258

Query: 141 ML 142
           +L
Sbjct: 259 LL 260


>gi|284024761|ref|ZP_06379159.1| hypothetical protein Saura13_09220 [Staphylococcus aureus subsp.
           aureus 132]
          Length = 256

 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 81/204 (39%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +II+  F++  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   LTMIIIIILFGFIAAFIDSVVG-GGGLISTPALLAI--------GLPPSVALGTNKLASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+ S ++  R G +++ ++      + + +   + + + V    L     I    + I
Sbjct: 56  FGSLTSTIKFIRSGKVDLYVVAKLFGFVFLASACGAYIATMVPSQILKPLIIIALSSVFI 115

Query: 140 LMLKRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             L +      R      F  + +     ++ GF  G +G G G F   ++L +G     
Sbjct: 116 FTLLKKDWGNTRTFTQFTFKKSIIFAALFILIGFYDGFVGGGTGSFMLFVLLVFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A   +  ++      AL++ +  G
Sbjct: 176 AAGNAKVLNFASNIGALVLFMVLG 199


>gi|65318816|ref|ZP_00391775.1| COG0730: Predicted permeases [Bacillus anthracis str. A2012]
 gi|218902660|ref|YP_002450494.1| hypothetical protein BCAH820_1543 [Bacillus cereus AH820]
 gi|218534885|gb|ACK87283.1| putative membrane protein [Bacillus cereus AH820]
          Length = 139

 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I  +F+ G +SGLFG+GGG ++VP +   F       +   H+A+ TS+ ++  +++
Sbjct: 23  LLAIFIAFIVGFISGLFGIGGGALLVPAMMLLF-------AFPAHIAVATSMFIVFLSAI 75

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +S   H   G ++       I    I   + + + + +    +     I  +++G  ++
Sbjct: 76  VSSATHISLGNVSWIYALILIPGAWIGGKIGAYINTKLSGKAVINLLRITLIILGTRLI 134



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 13/123 (10%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVR 214
             +      + GF+SG  G+GGG      +ML +    + A ATS  +  L A  +    
Sbjct: 22  PLLAIFIAFIVGFISGLFGIGGGALLVPAMMLLFAFPAHIAVATSMFIVFLSAIVSSATH 81

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           I            SLG V+    LI++P + +   +   ++  +  K +     + +   
Sbjct: 82  I------------SLGNVSWIYALILIPGAWIGGKIGAYINTKLSGKAVINLLRITLIIL 129

Query: 275 SFV 277
              
Sbjct: 130 GTR 132


>gi|325272863|ref|ZP_08139198.1| hypothetical protein G1E_07858 [Pseudomonas sp. TJI-51]
 gi|324102012|gb|EGB99523.1| hypothetical protein G1E_07858 [Pseudomonas sp. TJI-51]
          Length = 261

 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 96/273 (35%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             +A  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   FTIAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKASG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGI 139
              H R+  I+ KI             +T   +S +          + +  A+  +L  +
Sbjct: 60  VWVHARNKNIDWKITGLLSLGSVPAAALTLWFLSTLHTDTSALNAIIKQGLAVVLILTAL 119

Query: 140 LMLKRDRLYCERKF-----------PDNYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + RL                   N +  + G+V G +     +G G      L +L
Sbjct: 120 AILFKSRLQAFASHHAGDHYHLSAGTLNTLTVLTGVVLGVMVTLTSIGAGALGTVALFLL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +          +G G  G+     G ++   +  +L  S+ 
Sbjct: 180 YPFLVTRRLVGTEIAHAVPLTL-------VAGLGHAGM-----GNMDWSLLGYLLLGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + L+  I  + L    + ++    +  A
Sbjct: 228 GIYLGSHLTGRISDRVLRPCLAAMLLLIGYKLA 260



 Score = 40.1 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 28/57 (49%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
            ++   I G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +
Sbjct: 4   GSFGFTIAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKASGV 60



 Score = 36.6 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 42/120 (35%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + G +  L  +G G +    L   +  +           +GT +    P ++
Sbjct: 148 TLTVLTGVVLGVMVTLTSIGAGALGTVALFLLYPFL------VTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G ++  +L   +        + S +   +    L    A   LL+G  +  
Sbjct: 202 VAGLGHAGMGNMDWSLLGYLLLGSLPGIYLGSHLTGRISDRVLRPCLAAMLLLIGYKLAF 261


>gi|289675964|ref|ZP_06496854.1| hypothetical protein PsyrpsF_22001 [Pseudomonas syringae pv.
           syringae FF5]
 gi|330981046|gb|EGH79149.1| hypothetical protein PSYAP_21138 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 261

 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 99/273 (36%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +VA  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   FVVAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + HR+H  I+ K+            ++T   +S +        + + +A     LL  +
Sbjct: 60  VLVHRKHDNIDWKVTGLLTLGSVPAVLMTLWFLSTLHTAPEALNAIIKQALGFVLLLTAL 119

Query: 140 LMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + +L                     +  I G++ G +     +G G      L +L
Sbjct: 120 AVLFKKKLLAFAHRRGDGYSFFSGTSLTVLTVITGLILGTMVALTSIGAGALGTVALFIL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +              + GL   S+G +N   +  +L  S+ 
Sbjct: 180 YPLLPTRRLVGTEIAHAVPLTL------------VAGLGHASMGNMNWELLGWLLMGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + ++  +    L    ++++    F  A
Sbjct: 228 GIYLGSHMAGRVSDDLLRPFLAIMLGMIGFKLA 260



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 45/120 (37%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 148 VLTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G +N ++L   +        + S M   V    L    AI   ++G  +  
Sbjct: 202 VAGLGHASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDDLLRPFLAIMLGMIGFKLAF 261



 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                 + G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 4   GGLGFVVAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 61


>gi|254374781|ref|ZP_04990262.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|151572500|gb|EDN38154.1| conserved hypothetical protein [Francisella novicida GA99-3548]
          Length = 249

 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 101/262 (38%), Gaps = 28/262 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +I+  F+ G   GL G GG ++ VP+L+           +  H A+  SL V+  T++ 
Sbjct: 2   FLIIFGFICGIALGLTGGGGSILAVPLLTY-------GVGLEFHSAVMISLLVVGFTAIF 54

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + +   I+       I    I   + S +   +    L  +F+I  +L+G+  L +
Sbjct: 55  GLIVNYKQRDIDYIAAVIMIITGVIFAPIGSYISQGLSDKLLMLSFSILMILIGVWSLVK 114

Query: 145 DRLYCERKFPDN--------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKA 195
            +L    +                I G + G L+G  GVGGG      ++F     I +A
Sbjct: 115 VKLMSGSEKSIYKNITPRFIVALLISGGIVGTLTGFFGVGGGFLIVPALVFITAMPIRRA 174

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TS  V  +++    +      +    +        +     + +  S +   LATK+ 
Sbjct: 175 INTSLLVIFVVSISGFISH----YDKTNM--------SWYIASMFIVGSAIGMLLATKVK 222

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
             +  K L   F++++     V
Sbjct: 223 KSLNDKVLQTIFAIMLVILGVV 244



 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 7/122 (5%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I  ++++  + GTL+G FGVGGG ++VP L           ++ +  A+ TSL VI   
Sbjct: 133 FIVALLISGGIVGTLTGFFGVGGGFLIVPALVFI-------TAMPIRRAINTSLLVIFVV 185

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+  F+ H     ++  I   +I    I  ++ + +   ++   L   FAI  +++G+++
Sbjct: 186 SISGFISHYDKTNMSWYIASMFIVGSAIGMLLATKVKKSLNDKVLQTIFAIMLVILGVVI 245

Query: 142 LK 143
             
Sbjct: 246 YL 247


>gi|257051352|ref|YP_003129185.1| protein of unknown function DUF81 [Halorhabdus utahensis DSM 12940]
 gi|256690115|gb|ACV10452.1| protein of unknown function DUF81 [Halorhabdus utahensis DSM 12940]
          Length = 345

 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 7/123 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++  +F +G LSG  GVGGG + +P +            + + +A+GT L  I  + 
Sbjct: 180 LWMVLGVAFATGLLSGFLGVGGGFIRMPAMFYLI-------GVPVPIAVGTDLFEIVFSG 232

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +    +   G +++ I+   +    +   + S   S VD+S +   F +  L   + + 
Sbjct: 233 GLGSFLYGLEGAVDLSIVAPLLAGSALGARIGSTATSLVDESEIKIYFGLMLLGGAVAVA 292

Query: 143 KRD 145
            R 
Sbjct: 293 LRQ 295


>gi|218782899|ref|YP_002434217.1| hypothetical protein Dalk_5078 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218764283|gb|ACL06749.1| protein of unknown function DUF81 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 253

 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 84/201 (41%), Gaps = 13/201 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  + ++    +G +  + G GGG++ +PVL      MGI      H+A+GT+    +  
Sbjct: 7   HYAVFVLTGLCAGFVDSIAG-GGGILTMPVLL----AMGIPP----HLALGTNKLQASFG 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + + + R G +++  +   +    I   + ++ I  +   FL+         +    
Sbjct: 58  SFTAAVNYSRKGLVSLSGIWMPVLFTAIGATIGTVSIQMLSADFLSVIIPFLLAGIFFYT 117

Query: 142 LKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E    +   +      G++ GF  G  G G G F  + L+L  G  + KATA
Sbjct: 118 LLTPQLGQEDRKARMGKHAFYVAAGLLLGFYDGFFGPGTGSFWTIGLVLLIGLDLKKATA 177

Query: 198 TSAGVSALIAFPALLVRIYSG 218
            +  V+      AL+  I  G
Sbjct: 178 FTKIVNFTSNIVALIAFIIGG 198


>gi|217969230|ref|YP_002354464.1| hypothetical protein Tmz1t_0799 [Thauera sp. MZ1T]
 gi|217506557|gb|ACK53568.1| protein of unknown function DUF81 [Thauera sp. MZ1T]
          Length = 260

 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 93/269 (34%), Gaps = 34/269 (12%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             +A F  G + GL GVGGG +M P+L   F        I   VA+GT L   A T    
Sbjct: 5   YTIAGFAVGAIVGLTGVGGGSLMTPLLVLMF-------GIHPSVAVGTDLLYAAITKAGG 57

Query: 86  FMEHRRHGTINMKILKDWIFV-LPITTVVTSLMISHVDK------SFLNKAFAIFCLLMG 138
            + H   GT++ KI +      +P   +  +L+              +  +  +  +L  
Sbjct: 58  TLAHGLKGTVDWKITRLLATGSIPAAAITLALIGHFAPGGIEGAAHLIQVSLGVALVLTA 117

Query: 139 ILMLKRDRL----------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           + ++ R R+                    +  + G V G L     VG G      + F+
Sbjct: 118 VALIFRKRIQAYAATRSGGRPADPARTARLTVLTGAVLGVLVSISSVGAGALGVTAL-FF 176

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
                        + AL    + +        + G+  W LG V+   +  +L  S+   
Sbjct: 177 LYP---------AMPALRIVGSDIAHAVPLTAVAGIGHWFLGSVDWLLLGSLLVGSLPGI 227

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            L + +S  +  + L    + ++      
Sbjct: 228 WLGSHISTKVPDRVLRPILATMLVLVGAK 256



 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 48/118 (40%), Gaps = 6/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L ++   + G L  +  VG G + V  L   +  M    ++ +   +G+ +    P + +
Sbjct: 147 LTVLTGAVLGVLVSISSVGAGALGVTALFFLYPAM---PALRI---VGSDIAHAVPLTAV 200

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + H   G+++  +L   +        + S + + V    L    A   +L+G  ++
Sbjct: 201 AGIGHWFLGSVDWLLLGSLLVGSLPGIWLGSHISTKVPDRVLRPILATMLVLVGAKLM 258


>gi|302188848|ref|ZP_07265521.1| hypothetical protein Psyrps6_20977 [Pseudomonas syringae pv.
           syringae 642]
 gi|330969591|gb|EGH69657.1| hypothetical protein PSYAR_03759 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 261

 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 100/273 (36%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +VA  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   FVVAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + HR++  I+ K+            ++T   +S +        + + +A     LL  +
Sbjct: 60  VLVHRKNDNIDWKVTGLLTLGSVPAVLMTLWFLSTLHTAPEALNAIIKQALGFVLLLTAL 119

Query: 140 LMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + +L                     +  I G++ G +     +G G      L +L
Sbjct: 120 AVLFKKKLLAFAHRRGDGYSFFSGTSLTVLTVITGLILGTMVALTSIGAGALGTVALFIL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +              + GL   S+G +N   +  +L  S+ 
Sbjct: 180 YPLLPTRRLVGTEIAHAVPLTL------------VAGLGHASMGNMNWELLGWLLMGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + ++  +    L    ++++ T  F  A
Sbjct: 228 GIYLGSHMAGRVSDDLLRPFLAIMLGTIGFKLA 260



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 44/120 (36%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 148 VLTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G +N ++L   +        + S M   V    L    AI    +G  +  
Sbjct: 202 VAGLGHASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDDLLRPFLAIMLGTIGFKLAF 261



 Score = 39.7 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                 + G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 4   GGLGFVVAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 61


>gi|33152239|ref|NP_873592.1| hypothetical protein HD1117 [Haemophilus ducreyi 35000HP]
 gi|33148461|gb|AAP95981.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
          Length = 260

 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 80/208 (38%), Gaps = 13/208 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  +  +D + ++   + L+G +  + G GGGL+ +P L            +   +A+GT
Sbjct: 10  MEIELGIDILTMLFAVATLAGFIDSIAG-GGGLLTIPALL--------SAGLPPTIALGT 60

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  + +       +N+K +   I +  I     ++ +  +D + L       
Sbjct: 61  NKLQACGGSFSASLYFVSKKAVNIKQITLSILLTFIGASAGTIFVQIIDINALKAILPFL 120

Query: 134 CLLMGILMLKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYG 189
            L++G   L    +  E + P        +   +  GF  G  G   G F  L  +L  G
Sbjct: 121 ILIIGFYCLLSPNIDNEDRKPRISLPLFAFSAAIGIGFYDGVFGPATGSFFTLAFILLLG 180

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYS 217
            ++ KA A +  ++      +L+  I  
Sbjct: 181 FNLSKAVAHAKVLNFTSNVASLIFFILG 208


>gi|260856371|ref|YP_003230262.1| hypothetical protein ECO26_3315 [Escherichia coli O26:H11 str.
           11368]
 gi|260869049|ref|YP_003235451.1| hypothetical protein ECO111_3075 [Escherichia coli O111:H- str.
           11128]
 gi|300822203|ref|ZP_07102345.1| putative inner membrane protein [Escherichia coli MS 119-7]
 gi|331669027|ref|ZP_08369875.1| inner membrane protein YfcA [Escherichia coli TA271]
 gi|331678274|ref|ZP_08378949.1| inner membrane protein YfcA [Escherichia coli H591]
 gi|257755020|dbj|BAI26522.1| conserved predicted inner membrane protein [Escherichia coli
           O26:H11 str. 11368]
 gi|257765405|dbj|BAI36900.1| conserved predicted inner membrane protein [Escherichia coli
           O111:H- str. 11128]
 gi|300525333|gb|EFK46402.1| putative inner membrane protein [Escherichia coli MS 119-7]
 gi|323156479|gb|EFZ42634.1| hypothetical protein ECEPECA14_1692 [Escherichia coli EPECa14]
 gi|323176747|gb|EFZ62337.1| hypothetical protein ECOK1180_4112 [Escherichia coli 1180]
 gi|331064221|gb|EGI36132.1| inner membrane protein YfcA [Escherichia coli TA271]
 gi|331074734|gb|EGI46054.1| inner membrane protein YfcA [Escherichia coli H591]
          Length = 269

 Score = 59.7 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 74/180 (41%), Gaps = 13/180 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLGVLFFVAMLAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +  + ++  +L++ +V    L +   I  + +G+  
Sbjct: 65  SISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G   G F  L  +   G ++ KATA
Sbjct: 125 LLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATA 184


>gi|237728550|ref|ZP_04559031.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226910028|gb|EEH95946.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 265

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 90/252 (35%), Gaps = 34/252 (13%)

Query: 41  GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKIL 100
           G GGG+  +P L        I        A   +L  +A ++ +  ++  R+G +  +  
Sbjct: 19  GAGGGIFAIPTLV-------IGMGWAPQQAAPMALVAVAGSAALGAIDAWRNGLVRYRAA 71

Query: 101 KDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP------ 154
                     T V   +        L   FA   L +   +++   +     +P      
Sbjct: 72  IVITLAGVPITSVGLWVAQRSSPILLILLFAGVMLTVACRLVRAPEMAATHAYPVTLDEH 131

Query: 155 ---------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSA 204
                       +    G V+GF++G L VGGG     L+  +    I+   ATS  + A
Sbjct: 132 TGRFVWTVNTWLLFLTVGAVSGFMTGLLAVGGGFIIVPLLRQFTPLPIHSCIATSLMIVA 191

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           L+    +   +  G  L    P++L        ++ +   +    +  +LS+ + +  + 
Sbjct: 192 LVGMGGIATAVMQGATLPM--PFTL------WFVLSVVTGMF---IGRRLSHHLPEHIVQ 240

Query: 265 IGFSMIMFTTSF 276
            GF+ ++   + 
Sbjct: 241 KGFAGLLIVVAL 252



 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 8/126 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V+   L +    +SG ++GL  VGGG ++VP+L +   L        +H  + TSL ++A
Sbjct: 139 VNTWLLFLTVGAVSGFMTGLLAVGGGFIIVPLLRQFTPL-------PIHSCIATSLMIVA 191

Query: 80  PTSVMSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              +         G  + M     ++  +     +   +  H+ +  + K FA   +++ 
Sbjct: 192 LVGMGGIATAVMQGATLPMPFTLWFVLSVVTGMFIGRRLSHHLPEHIVQKGFAGLLIVVA 251

Query: 139 ILMLKR 144
           + M+  
Sbjct: 252 LGMVFN 257


>gi|120603764|ref|YP_968164.1| hypothetical protein Dvul_2726 [Desulfovibrio vulgaris DP4]
 gi|120563993|gb|ABM29737.1| protein of unknown function DUF81 [Desulfovibrio vulgaris DP4]
 gi|311232542|gb|ADP85396.1| protein of unknown function DUF81 [Desulfovibrio vulgaris RCH1]
          Length = 381

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 54/122 (44%), Gaps = 8/122 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +V   +   ++   GVGGG ++VP L+           + M++A GTS   +  + +
Sbjct: 258 ILPVVGGIVISAIAAFLGVGGGFLLVPFLTSI-------SELPMYLAAGTSALAVLVSMI 310

Query: 84  MSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            S +     GT ++  ++   +  + I +++      +   + L + F +  L +GI  +
Sbjct: 311 TSIITLVSKGTPLDWTLIGTELVGIVIGSIIGPRTSKYFSDTLLKRIFIVLALYVGIDYV 370

Query: 143 KR 144
            R
Sbjct: 371 LR 372



 Score = 43.9 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 31/248 (12%), Positives = 68/248 (27%), Gaps = 63/248 (25%)

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMGI 139
           + ++S   + R G + + +         I    ++      V  S     F +F L++G+
Sbjct: 131 SGLISSFNYYRMGRLVLPLAVALGAGSIIGAWASAYFTAGKVSFSSYQGYFGLFVLVLGL 190

Query: 140 LMLKRDRLYCERKFP--------------------------------------------- 154
            +        +                                                 
Sbjct: 191 YLFWETSPAGQAHKKKAKEAAKAFEEAVKKQKSGEKIDESAIGVKVKAFTMSRCVFTFSG 250

Query: 155 -----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAF 208
                +  +  + G+V   ++  LGVGGG      +       +Y A  TSA    +   
Sbjct: 251 VEFSFNPILPVVGGIVISAIAAFLGVGGGFLLVPFLTSISELPMYLAAGTSALAVLVSMI 310

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            +++  +  G  L+     +        ++ I+  SI    +  + S       L   F 
Sbjct: 311 TSIITLVSKGTPLDWTLIGT-------ELVGIVIGSI----IGPRTSKYFSDTLLKRIFI 359

Query: 269 MIMFTTSF 276
           ++      
Sbjct: 360 VLALYVGI 367


>gi|325968956|ref|YP_004245148.1| permease [Vulcanisaeta moutnovskia 768-28]
 gi|323708159|gb|ADY01646.1| putative permease [Vulcanisaeta moutnovskia 768-28]
          Length = 307

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 84/269 (31%), Gaps = 52/269 (19%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGG V+VP+L+           I +  A G SL     TS  +   + R    N++I   
Sbjct: 2   GGGTVLVPLLTLFL-------GIPIAYAAGASLISTIATSSGAASAYIRDKITNVRIGMG 54

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN------ 156
                   ++V SL  +++    L     +   ++ +  +       + + PD       
Sbjct: 55  LEIATTTGSIVGSLTAAYIYSHSLAWIVYVVFGIVILTSIIPTAQRGKYEIPDPRKPDRT 114

Query: 157 --------------------------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YG 189
                                     ++  +     GF+SG LG+G G    L M +   
Sbjct: 115 TRIFKLYGSYYDDALKREVKYWGVRWWLGELIMFFAGFISGLLGIGSGALKVLGMDWAMN 174

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +  +T TS  +  + A     +             W  G++      +     ++   
Sbjct: 175 LPMKVSTTTSNFMIGVTAATGSALY------------WYFGYIQPMMAAVTAIGVLIGAM 222

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             T++   I  K +   F  I+       
Sbjct: 223 SGTRILVRITNKQVRWVFLAILAFLGMEM 251



 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G +SGL G+G G + V  +  A        ++ M V+  TS  +I  T+      + 
Sbjct: 148 FFAGFISGLLGIGSGALKVLGMDWAM-------NLPMKVSTTTSNFMIGVTAATGSALYW 200

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I   +       + I  +  + ++  +    +   F      +G+ ML +
Sbjct: 201 YFGYIQPMMAAVTAIGVLIGAMSGTRILVRITNKQVRWVFLAILAFLGMEMLLK 254


>gi|110642531|ref|YP_670261.1| hypothetical protein ECP_2366 [Escherichia coli 536]
 gi|117624517|ref|YP_853430.1| hypothetical protein APECO1_4237 [Escherichia coli APEC O1]
 gi|170681877|ref|YP_001744528.1| hypothetical protein EcSMS35_2484 [Escherichia coli SMS-3-5]
 gi|191170040|ref|ZP_03031594.1| putative membrane protein [Escherichia coli F11]
 gi|218559240|ref|YP_002392153.1| hypothetical protein ECS88_2475 [Escherichia coli S88]
 gi|218700803|ref|YP_002408432.1| hypothetical protein ECIAI39_2476 [Escherichia coli IAI39]
 gi|237704807|ref|ZP_04535288.1| inner membrane protein yfcA [Escherichia sp. 3_2_53FAA]
 gi|300986868|ref|ZP_07177850.1| putative inner membrane protein [Escherichia coli MS 200-1]
 gi|306814561|ref|ZP_07448723.1| hypothetical protein ECNC101_21007 [Escherichia coli NC101]
 gi|331647984|ref|ZP_08349076.1| inner membrane protein YfcA [Escherichia coli M605]
 gi|331658501|ref|ZP_08359445.1| inner membrane protein YfcA [Escherichia coli TA206]
 gi|331684000|ref|ZP_08384596.1| inner membrane protein YfcA [Escherichia coli H299]
 gi|110344123|gb|ABG70360.1| putative permease (putative membrane protein) [Escherichia coli
           536]
 gi|115513641|gb|ABJ01716.1| putative structural protein [Escherichia coli APEC O1]
 gi|170519595|gb|ACB17773.1| putative membrane protein [Escherichia coli SMS-3-5]
 gi|190909556|gb|EDV69141.1| putative membrane protein [Escherichia coli F11]
 gi|218366009|emb|CAR03753.1| conserved hypothetical protein; putative inner membrane protein
           [Escherichia coli S88]
 gi|218370789|emb|CAR18602.1| conserved hypothetical protein; putative inner membrane protein
           [Escherichia coli IAI39]
 gi|222034083|emb|CAP76824.1| Inner membrane protein yfcA [Escherichia coli LF82]
 gi|226901173|gb|EEH87432.1| inner membrane protein yfcA [Escherichia sp. 3_2_53FAA]
 gi|281179414|dbj|BAI55744.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|294491656|gb|ADE90412.1| putative membrane protein [Escherichia coli IHE3034]
 gi|300306357|gb|EFJ60877.1| putative inner membrane protein [Escherichia coli MS 200-1]
 gi|305851955|gb|EFM52407.1| hypothetical protein ECNC101_21007 [Escherichia coli NC101]
 gi|312946946|gb|ADR27773.1| hypothetical protein NRG857_11785 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315288302|gb|EFU47701.1| putative inner membrane protein [Escherichia coli MS 110-3]
 gi|315298137|gb|EFU57401.1| putative inner membrane protein [Escherichia coli MS 16-3]
 gi|323952120|gb|EGB47994.1| inner membrane protein yfcA [Escherichia coli H252]
 gi|323955849|gb|EGB51604.1| inner membrane protein yfcA [Escherichia coli H263]
 gi|324015383|gb|EGB84602.1| putative inner membrane protein [Escherichia coli MS 60-1]
 gi|331043708|gb|EGI15846.1| inner membrane protein YfcA [Escherichia coli M605]
 gi|331054166|gb|EGI26193.1| inner membrane protein YfcA [Escherichia coli TA206]
 gi|331078952|gb|EGI50154.1| inner membrane protein YfcA [Escherichia coli H299]
          Length = 269

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 75/180 (41%), Gaps = 13/180 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L       G+  +     A+ T+       
Sbjct: 14  LLGVLFFVAMLAGFIDSIAG-GGGLLTIPALM----AAGMSPAN----ALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +  + ++  +L++ +V    L +   I  + +G+  
Sbjct: 65  SISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        + G   GF  G  G   G F  L  +   G ++ KATA
Sbjct: 125 LLMPKLGEEDRQRRMYGLPFALVAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATA 184


>gi|317404885|gb|EFV85255.1| hypothetical protein HMPREF0005_03806 [Achromobacter xylosoxidans
           C54]
          Length = 265

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 75/215 (34%), Gaps = 30/215 (13%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +     G   GL G GGG++ VP L     L     +    +A+G         S +  +
Sbjct: 7   LLGLCIGVSLGLTGAGGGILAVPALMFGLGLTLTQAAPVALIAVG-------IASAVGAL 59

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR- 146
           +    G +  K       V  +T  +   +   V   +L+  FA   LL+ + M+++ R 
Sbjct: 60  QGLMRGLVRYKAAMLMAAVGALTAPLGLSLARQVPAQWLSLTFAGVMLLVAVRMVQQSRR 119

Query: 147 -----------LYCERKFP----------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
                          R  P                  G V+G  +G LGVGGG      +
Sbjct: 120 RAPLPGAPDAPPKACRLSPETGRFVWNRLTAATLGGIGAVSGLCTGMLGVGGGFIIVPAL 179

Query: 186 LFYG-ASIYKATATSAGVSALIAFPALLVRIYSGW 219
             +  A +    +TS  V AL++   +   +  G 
Sbjct: 180 THFSDARMISIVSTSLMVIALVSAATVSSALLHGL 214



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 11/119 (9%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            + G+  G   G  G GGGI     ++F             G++   A P  L+ +    
Sbjct: 6   TLLGLCIGVSLGLTGAGGGILAVPALMF-----------GLGLTLTQAAPVALIAVGIAS 54

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +  L     G V   A +++  +  L  PL   L+  +  ++L++ F+ +M   +   
Sbjct: 55  AVGALQGLMRGLVRYKAAMLMAAVGALTAPLGLSLARQVPAQWLSLTFAGVMLLVAVRM 113


>gi|152989835|ref|YP_001355557.1| hypothetical protein NIS_0083 [Nitratiruptor sp. SB155-2]
 gi|151421696|dbj|BAF69200.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 250

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 83/198 (41%), Gaps = 10/198 (5%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++ Y     +   LS   + + GVG  + +VP     F +MG+     +++A    L +
Sbjct: 4   DIIHYAIYFFLTLVLSTLFA-MGGVGSAIALVP----LFSMMGMP----INLAKAIGLFI 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
            + +++ + + +   G +++K     I  + + T + +    +V K  +      F L+ 
Sbjct: 55  NSASTITASVMNFFRGVLDIKFALPLIISIMVATPIGAWSSQYVQKEIIEWMLVAFLLIS 114

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             L+L  ++   +  +   +V Y+ G   G +SG +GVGGG     L++  G    KA  
Sbjct: 115 STLLLFSNK-KPKVVYDKVWVLYVIGGSVGIVSGMIGVGGGSLIMPLLILLGFDAKKAAY 173

Query: 198 TSAGVSALIAFPALLVRI 215
             + V       A    +
Sbjct: 174 AISFVIPFSTLGAFFTYL 191


>gi|91211624|ref|YP_541610.1| hypothetical protein UTI89_C2612 [Escherichia coli UTI89]
 gi|91073198|gb|ABE08079.1| putative structural protein [Escherichia coli UTI89]
 gi|307626136|gb|ADN70440.1| hypothetical protein UM146_05175 [Escherichia coli UM146]
          Length = 269

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 75/180 (41%), Gaps = 13/180 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L       G+  +     A+ T+       
Sbjct: 14  LLGVLFFVAMLAGFIDSIAG-GGGLLTIPALM----AAGMSPAN----ALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +  + ++  +L++ +V    L +   I  + +G+  
Sbjct: 65  SISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        + G   GF  G  G   G F  L  +   G ++ KATA
Sbjct: 125 LLMPKLGEEDRQRRMYGLPFALVAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATA 184


>gi|282899000|ref|ZP_06306982.1| protein of unknown function DUF81 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281196140|gb|EFA71055.1| protein of unknown function DUF81 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 262

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 52/273 (19%), Positives = 102/273 (37%), Gaps = 40/273 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ V SF  GT+ GL GVGG  ++ P+L   FQ       +   +A+ + +       V
Sbjct: 4   LLLPVFSFFIGTIVGLTGVGGASLVTPMLIFVFQ-------VPPSIAISSDVVAATLMKV 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS---------FLNKAFAIFC 134
           +  ++H +  T++M+++K         ++V   ++  +  +          L     +  
Sbjct: 57  VGGVKHWQQKTLDMEVVKWLAMGSVSGSLVGVGVLHQLRTNGYEMDSLLLKLLGIMILIV 116

Query: 135 LLMGILMLKRDRLYCERKFP-----------DNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
            L  +  +    L+ +  FP             ++  + G+  GF  G   V  G    L
Sbjct: 117 TLTALAQMVIITLFPQVNFPEPPKLSVKTDQGRFLTLLIGVFLGFCVGMTSVSSGSMFAL 176

Query: 184 LM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           ++   +     K   T    +A++     L  +            +LG V+   VL I  
Sbjct: 177 VLVTLFSLDAQKLVGTDITQAAILLIFTSLGHL------------TLGTVDWSLVLPIWI 224

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            S+    L +KL  +  ++ L +    I+   S
Sbjct: 225 GSVPGVVLGSKLCQITPQRPLKLIIYSILVMVS 257


>gi|57652012|ref|YP_186597.1| hypothetical protein SACOL1763 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87162168|ref|YP_494354.1| hypothetical protein SAUSA300_1660 [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88195523|ref|YP_500328.1| hypothetical protein SAOUHSC_01823 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|151221820|ref|YP_001332642.1| hypothetical protein NWMN_1608 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|161509928|ref|YP_001575587.1| hypothetical protein USA300HOU_1701 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221142349|ref|ZP_03566842.1| hypothetical protein SauraJ_12052 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|258450891|ref|ZP_05698944.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|262049028|ref|ZP_06021906.1| hypothetical protein SAD30_2233 [Staphylococcus aureus D30]
 gi|262051800|ref|ZP_06024017.1| hypothetical protein SA930_0462 [Staphylococcus aureus 930918-3]
 gi|282924404|ref|ZP_06332077.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|294849875|ref|ZP_06790614.1| hypothetical protein SKAG_01963 [Staphylococcus aureus A9754]
 gi|304380694|ref|ZP_07363365.1| membrane protein [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|57286198|gb|AAW38292.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           COL]
 gi|87128142|gb|ABD22656.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203081|gb|ABD30891.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150374620|dbj|BAF67880.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|160368737|gb|ABX29708.1| hypothetical protein USA300HOU_1701 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|257861427|gb|EEV84235.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|259160294|gb|EEW45321.1| hypothetical protein SA930_0462 [Staphylococcus aureus 930918-3]
 gi|259162845|gb|EEW47409.1| hypothetical protein SAD30_2233 [Staphylococcus aureus D30]
 gi|269941193|emb|CBI49581.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282592905|gb|EFB97908.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|294823214|gb|EFG39644.1| hypothetical protein SKAG_01963 [Staphylococcus aureus A9754]
 gi|302751540|gb|ADL65717.1| sulfite exporter TauE/SafE-like protein [Staphylococcus aureus
           subsp. aureus str. JKD6008]
 gi|304340801|gb|EFM06730.1| membrane protein [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|315197181|gb|EFU27520.1| hypothetical protein CGSSa01_00811 [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|329314387|gb|AEB88800.1| Sulfite exporter TauE/SafE-like protein [Staphylococcus aureus
           subsp. aureus T0131]
 gi|329726991|gb|EGG63448.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           21189]
          Length = 256

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +II+  F++  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   LTMIIIIILFGFIAAFIDSVVG-GGGLISTPALLAI--------GLPPSVALGTNKLASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+ S ++  R G +++ ++      + + +   + + + V    L     I    + I
Sbjct: 56  FGSLTSTIKFIRSGKVDLYVVAKLFGFVFLASACGAYIATMVPSQILKPLIIIALSSVFI 115

Query: 140 LMLKRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             L +      R      F    +     ++ GF  G +G G G F   ++L +G     
Sbjct: 116 FTLLKKDWGNTRTFTQFTFKKAIIFAALFILIGFYDGFVGGGTGSFMLFVLLVFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A   +  ++      AL++ +  G
Sbjct: 176 AAGNAKVLNFASNIGALVLFMVLG 199


>gi|329297425|ref|ZP_08254761.1| hypothetical protein Pstas_14349 [Plautia stali symbiont]
          Length = 265

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 94/234 (40%), Gaps = 25/234 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ + + L+  +  + G GGGL+ VP L       G+  +      + T+       S  
Sbjct: 13  VLFLVAVLAAFIDSIAG-GGGLLTVPSLL----AAGLSPAQV----LATNKLQSVGGSFS 63

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +   R G + ++  +  I +  +  +  +L+I H+    L +   +  + +G+  L  
Sbjct: 64  ASLYFVRRGAVKLREQRLNIAMTFLGAIGGTLLIQHIQAEILCQILPLLLISIGLWFLLM 123

Query: 145 DRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSA 200
            RL     E++        + G   GF  G  G G G F  L  +   G ++ KATA + 
Sbjct: 124 PRLGEADREQRLHGLAFALVGGGCVGFYDGFFGPGAGSFYALAFVTLCGFNLAKATAHAK 183

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            ++    F +LL  ++ G             V  G  +I+L  + +   L  +L
Sbjct: 184 ILNFTSNFASLLFFMFGGK------------VVWGTGVIMLLGAFIGARLGARL 225


>gi|157165283|ref|YP_001466468.1| Cpp22 [Campylobacter concisus 13826]
 gi|112801587|gb|EAT98931.1| putative domain of unknown function [Campylobacter concisus 13826]
          Length = 246

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 86/246 (34%), Gaps = 21/246 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +     G ++G FG+GGG V+VP++              +  A+G S+  +  ++   
Sbjct: 6   LFIIGIGVGYIAGFFGIGGGTVVVPIMVAF--------GYGVKDAIGISVMQMIFSATFG 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              + + G + +           +    + +++SH     L        +   I +    
Sbjct: 58  SYLNYKAGLLKLNRGVFLGLGGLVGASFSGIIVSHAPALLLESMLLATFVFSLIKLYFSP 117

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSA 204
                      ++ ++ G+  G  + ++G+GGG+F   +++ F    + KA +       
Sbjct: 118 NSDGSNANNSLFLLFLVGVFVGVFAISIGIGGGVFIAPILVGFLRYELKKAVSMGVFFVM 177

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
             A    +    +            G ++      +   S++     TK +    KK L 
Sbjct: 178 FAAIAGFISLSLN------------GHISYAEGTFLGLGSLIGAYFGTKKTQNTDKKTLK 225

Query: 265 IGFSMI 270
             F + 
Sbjct: 226 KWFLLF 231



 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 7/124 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + L+ +     G  +   G+GGG+ + P+L    +         +  A+   +  +  
Sbjct: 126 NSLFLLFLVGVFVGVFAISIGIGGGVFIAPILVGFLRY-------ELKKAVSMGVFFVMF 178

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            ++  F+    +G I+            I     +    + DK  L K F +F + M  L
Sbjct: 179 AAIAGFISLSLNGHISYAEGTFLGLGSLIGAYFGTKKTQNTDKKTLKKWFLLFYIAMICL 238

Query: 141 MLKR 144
           +LK 
Sbjct: 239 ILKD 242


>gi|225419986|ref|ZP_03762289.1| hypothetical protein CLOSTASPAR_06327 [Clostridium asparagiforme
           DSM 15981]
 gi|225041378|gb|EEG51624.1| hypothetical protein CLOSTASPAR_06327 [Clostridium asparagiforme
           DSM 15981]
          Length = 252

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 76/204 (37%), Gaps = 16/204 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  ++I+A+ + G L GL GV G   ++P++      MG+ + + +      S     
Sbjct: 1   MGFWMIVILANLIVGVLVGLTGVAG--FLLPIVYTGPLGMGVPEGLAL------SFAAFI 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +  +  M ++R G +++           +  V+   +   + +  +     +  LL G+
Sbjct: 53  VSGALGAMNYKRAGNLDIPFGIRLSIGSLVGAVLGVKLNLVIPEGQVKILLYMVVLLSGV 112

Query: 140 LMLKRDRLYCERK--------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
            +L R                          G VTG +    G GG +    L++  G +
Sbjct: 113 SILLRKDKVQTEGGGKTGYQITEHLPATLALGFVTGVICSLSGAGGPVLVMPLLVVLGVN 172

Query: 192 IYKATATSAGVSALIAFPALLVRI 215
           +  A   +   S  I  PA +  +
Sbjct: 173 VRTAVGIALFNSVFIGIPACIGYM 196


>gi|90419966|ref|ZP_01227875.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336007|gb|EAS49755.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 256

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 83/246 (33%), Gaps = 9/246 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L +   FL+  + G  G+  G+V   VL   F +     S  +H A          T+  
Sbjct: 6   LFLAVGFLAQLVDGALGMAYGVVSSTVLLS-FGVAPAAASASVHTAE-------LFTTAA 57

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S   H  +  ++ K+    + +  +  V+ + +++ +  S L      +  ++G+ +L R
Sbjct: 58  SGTAHLVNRNVDWKLFWRLVPLGILGGVLGTYVLTSISGSVLRPYVGAYLAVIGVYLLVR 117

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
                  K              GFL    G G G      +L  G        T      
Sbjct: 118 SFRKIPSKPVSPATSMPLAACGGFLDAVGGGGWGPIVTSGLLGAGGQPRYVIGTVNTAEF 177

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           L+     L  +++    +      L   +  A+L ++   +   P A  +   I +  L 
Sbjct: 178 LVTLSVSLTFVFALVTGHWEEAGDL-TTHGLAILGLIVGGVAAAPFAGTIVRRISETALL 236

Query: 265 IGFSMI 270
               ++
Sbjct: 237 RTVGLL 242


>gi|238026374|ref|YP_002910605.1| hypothetical protein bglu_1g07080 [Burkholderia glumae BGR1]
 gi|237875568|gb|ACR27901.1| Hypothetical protein bglu_1g07080 [Burkholderia glumae BGR1]
          Length = 262

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 87/270 (32%), Gaps = 35/270 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L   +    G L G+ GVGGG +M P+L   F       ++    A+GT L   A T  
Sbjct: 8   LLYTASGLFVGFLVGMTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSL------MISHVDKSFLNKAFAIFCLLM 137
              + H   G+++ +I             +T        + S      +        LL 
Sbjct: 61  TGTLVHGAKGSVDWRITGRLAAGSVPAAALTLWLLHAHGLGSTSTNRLIQIVLGGALLLT 120

Query: 138 GILMLKRDRLY--------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY- 188
            + ++ R +L                  +  + G+V G L     VG G     ++L   
Sbjct: 121 SVALMFRPQLAAFASRHALAPNPARTVALTVLTGIVLGVLVSLTSVGAGAIGVTVLLLLY 180

Query: 189 -GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
              S  +   +    +  +              + G+  W LG V+   ++ +L  S+  
Sbjct: 181 PTLSTTRIVGSDIAHAVPLTL------------VAGMGHWLLGSVDWSMLVSLLLGSLPG 228

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               + LS    ++ L    +  +      
Sbjct: 229 IVAGSHLSTRAPERLLRNVLAATLVAVGLK 258



 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 49/122 (40%), Gaps = 6/122 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L ++   + G L  L  VG G + V VL   +       ++     +G+ +    P +
Sbjct: 147 VALTVLTGIVLGVLVSLTSVGAGAIGVTVLLLLY------PTLSTTRIVGSDIAHAVPLT 200

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++ M H   G+++  +L   +       V  S + +   +  L    A   + +G+ ++
Sbjct: 201 LVAGMGHWLLGSVDWSMLVSLLLGSLPGIVAGSHLSTRAPERLLRNVLAATLVAVGLKLV 260

Query: 143 KR 144
             
Sbjct: 261 AS 262


>gi|115522742|ref|YP_779653.1| hypothetical protein RPE_0716 [Rhodopseudomonas palustris BisA53]
 gi|115516689|gb|ABJ04673.1| protein of unknown function DUF81 [Rhodopseudomonas palustris
           BisA53]
          Length = 308

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 97/307 (31%), Gaps = 56/307 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + LI+      G +SG+FG+GGG +M P+L            I   V
Sbjct: 1   MQLYLPIADLPVNVLLILAMGAAVGFVSGMFGIGGGFLMTPLLIFI--------GISPAV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH--------- 120
           A+ +    +A +S    + +     ++  +    +    + T +     +          
Sbjct: 53  AVASVTSHMAASSFSGALSYWHRRMLDPMLALVLLCGGVLGTALGVWFFTLMRELGQLDL 112

Query: 121 ---VDKSFLNKAFAIFCLLMGILML------------------------KRDRLYCERKF 153
              +    L        +  G   +                         + R    + +
Sbjct: 113 MIALSYVALLTTVGGLMVWEGFRAILRTRRGETPLVKRSGNRNWIHALPLKIRFKRSKIY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                  + G++ GF+   +GVGGG     ++++           TS  ++ +    A +
Sbjct: 173 LSVIPVVLVGLLIGFIGAVMGVGGGFILVPILIYLLRVPTSTGIGTSMVLTLVTMLIATV 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           +   +   ++ +             L+++   +       +    I  + L +   +++ 
Sbjct: 233 LHAVTNHLVDAVLA-----------LMLMIGGVTGAQFGARAGQKIRGEQLRLLLGLLIL 281

Query: 273 TTSFVFA 279
                FA
Sbjct: 282 AVGVRFA 288



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/148 (12%), Positives = 52/148 (35%), Gaps = 8/148 (5%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           ++   L +   +  +   +  +++   L G +  + GVGGG ++VP+L    +       
Sbjct: 157 IHALPLKIRFKRSKIYLSVIPVVLVGLLIGFIGAVMGVGGGFILVPILIYLLR------- 209

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDK 123
           +     +GTS+ +   T +++ + H      ++  +    +          +     +  
Sbjct: 210 VPTSTGIGTSMVLTLVTMLIATVLHAVTNHLVDAVLALMLMIGGVTGAQFGARAGQKIRG 269

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCER 151
             L     +  L +G+       +    
Sbjct: 270 EQLRLLLGLLILAVGVRFAIELGIRPAD 297


>gi|228938180|ref|ZP_04100797.1| integral membrane protein [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228971057|ref|ZP_04131692.1| integral membrane protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228788653|gb|EEM36597.1| integral membrane protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228821495|gb|EEM67503.1| integral membrane protein [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326938682|gb|AEA14578.1| hypothetical protein CT43_CH0888 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 255

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 76/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K     + +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 179 AGNAKFLNLGSNVGALLMFMYVG 201



 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 51/120 (42%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   ++P++ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118


>gi|325496633|gb|EGC94492.1| hypothetical protein ECD227_0730 [Escherichia fergusonii ECD227]
          Length = 269

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 13/180 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + L+   + L+G +  + G GGGL+ +P L       G+  +     A+ T+       
Sbjct: 14  LLGLLFFVAILAGFIDSIAG-GGGLLTIPALM----AAGMSPAN----ALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +  I ++  +L++ +V    L +   I  + +G+  
Sbjct: 65  SISATIYFIRRKVVSLSDQKLNIAMTFIGSMSGALLVQYVQADVLRQILPILVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        + G   G   G  G   G F  L  +   G ++ KATA
Sbjct: 125 LLMPKLGEEDRQRRMYGLPFALVAGGCVGCYDGFFGPAAGSFYALAFVTLCGFNLAKATA 184


>gi|114563797|ref|YP_751310.1| hypothetical protein Sfri_2631 [Shewanella frigidimarina NCIMB 400]
 gi|114335090|gb|ABI72472.1| protein of unknown function DUF81 [Shewanella frigidimarina NCIMB
           400]
          Length = 257

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 78/202 (38%), Gaps = 16/202 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ V   L+G +  + G GGGL+ +P L       GI      H+A+GT+       S+
Sbjct: 11  AILAVIGILAGFIDAIVG-GGGLLSIPALLTV----GIPP----HLALGTNKLAACFGSL 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S     +    +  + K   F   + ++    ++  +D  +L+K   +  + + I  L 
Sbjct: 62  TSSYTFYKQHLFSPALWKACFFATLVGSIAGCGLVFLIDPLWLDKILPLLIISIAIYTLF 121

Query: 144 RDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
             +   ++           Y +   G + G   G  G G G F T   +  +   +  + 
Sbjct: 122 SPKAMGDKNTIVPKYRSPKYKQISQGFILGGYDGFAGPGIGAFWTVSSISLHKLPLLHSC 181

Query: 197 ATSAGVSALIAFPALLVRIYSG 218
             +  ++A+    AL++    G
Sbjct: 182 GLARVMTAVSNITALIIFASMG 203


>gi|301166475|emb|CBW26051.1| putative integral membrane protein [Bacteriovorax marinus SJ]
          Length = 254

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 86/201 (42%), Gaps = 15/201 (7%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI +    +G +  + G GGGL+ +P              +  H+ +GT+  V    S +
Sbjct: 10  LIFIFVSFAGFVDSIAG-GGGLITIPTYMAL--------GVPSHLILGTNKLVSTSGSTV 60

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +   + + G ++ K++   IF+  I + + + + S++DK  +         ++ IL   +
Sbjct: 61  AVFRYIKSGVVDFKVIGYGIFLGLIGSSIGANLASYLDKKNMTYILIAVVPIIFILNNFK 120

Query: 145 DRLYCERKFPDNYVKYI-----WGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATAT 198
           DR+     F     + I      G + G   G  G G G F  + M+ +    +++A+A+
Sbjct: 121 DRILKHDDFSLTNKQLIIRCSLIGFIIGGYDGFFGPGTGTFLIVAMVLFLNYGLHQASAS 180

Query: 199 SAGVSALIAFPALLVRIYSGW 219
           +  ++      A ++ +  G 
Sbjct: 181 ARMINYTSNISAFIIFLSKGL 201


>gi|55380318|ref|YP_138167.1| hypothetical protein rrnB0294 [Haloarcula marismortui ATCC 43049]
 gi|55233043|gb|AAV48461.1| unknown [Haloarcula marismortui ATCC 43049]
          Length = 342

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 8/134 (5%)

Query: 6   YNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSI 65
           Y    M+ L     V  + +I+  +F++G LSG  GVGGG + +P L            +
Sbjct: 164 YRIPPMISLRGGVSVS-LWMILGVAFVTGLLSGFLGVGGGFIRMPALFYLI-------GV 215

Query: 66  CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
            + +A+GT L  I  +  +    +   G +++ I+   +        V S   S VD+  
Sbjct: 216 PVPIAVGTDLFEIVFSGGLGSFLYALDGGVDLSIVLPLLAGSAFGARVGSAATSIVDEDE 275

Query: 126 LNKAFAIFCLLMGI 139
           +   F +  L   +
Sbjct: 276 IKVYFGLMLLGGAL 289



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 94/305 (30%), Gaps = 65/305 (21%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L +    L G L G FG+GG  ++ P L                VA+G+ L  + 
Sbjct: 8   LAMVVLFVGFGLLIGVLFGFFGMGGSFLVTPALLVM--------GYPTRVAVGSGLAFVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------------SFLN 127
            TSV++ ++HR  G ++ K+    I            ++ H++               L 
Sbjct: 60  GTSVIATLKHRDMGQVDYKLGVLMIAGTTAGIEAGKEIVLHLETLGLAGSIISVTYVVLL 119

Query: 128 KAFAIFCLLMGI---------------------------LMLKRDRLYCERKFPDN---- 156
                F     +                             ++  R+             
Sbjct: 120 GGIGAFVTYEALRGGDGGEGIDHDAAEGDVDADDIPDIAKKIQSYRIPPMISLRGGVSVS 179

Query: 157 -YVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
            ++      VTG LSG LGVGGG      L    G  +  A  T              + 
Sbjct: 180 LWMILGVAFVTGLLSGFLGVGGGFIRMPALFYLIGVPVPIAVGTDLFEIVFSGGLGSFLY 239

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
              G             V++  VL +L  S     + +  + ++ +  + + F +++   
Sbjct: 240 ALDGG------------VDLSIVLPLLAGSAFGARVGSAATSIVDEDEIKVYFGLMLLGG 287

Query: 275 SFVFA 279
           +   A
Sbjct: 288 ALAVA 292


>gi|72162095|ref|YP_289752.1| hypothetical protein Tfu_1694 [Thermobifida fusca YX]
 gi|71915827|gb|AAZ55729.1| conserved hypothetical protein [Thermobifida fusca YX]
          Length = 307

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 91/261 (34%), Gaps = 23/261 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+ +A FL+  + G  G+  G+      +    L+G + +     A  T       T+
Sbjct: 4   LVLLALAGFLAQLVDGSLGMAYGVTS----TTLLLLIGTNPAA----ASATVHLAEIGTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S + H R G ++ K++        I     +  +S +         +   L++G+ +L
Sbjct: 56  LASGIAHWRLGNVDWKVVGRIAVPGAIGAFAGATFLSSLSTETAKPVMSAILLVLGVYIL 115

Query: 143 KR-----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKAT 196
            R            K          G+  GF+    G G G      +L  G     K  
Sbjct: 116 IRFTAWGVSTRDLNKPVRRRFLVPLGLFGGFVDATGGGGWGPVGTPALLASGRIEPRKVI 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            +      L+A  A    +  G G  G        VN+G  + +L   ++  P+A  +  
Sbjct: 176 GSIDTSEFLVALAASAGFLV-GLGSAG--------VNLGWAVALLIGGVVAAPIAAWIVR 226

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
           +   + L      ++  T+  
Sbjct: 227 VFPPRVLGSAVGGLILLTNTR 247


>gi|241761454|ref|ZP_04759542.1| protein of unknown function DUF81 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|283856175|ref|YP_161790.2| hypothetical protein ZMO0055 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241374361|gb|EER63858.1| protein of unknown function DUF81 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|283775171|gb|AAV88679.2| protein of unknown function DUF81 [Zymomonas mobilis subsp. mobilis
           ZM4]
          Length = 261

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 92/269 (34%), Gaps = 35/269 (13%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L  ++  + G L G+ GVGGG +M P+L   F        +    A+GT L   + T  +
Sbjct: 10  LYSLSGLVIGFLVGMTGVGGGSLMTPLLILLF-------GVHPQTAVGTDLLYASATKFV 62

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAIFCLLMG 138
               H   G+++ K++          ++++ + + ++          ++    I  LL  
Sbjct: 63  GTGIHGFKGSVDWKVVTRLCAGSIPASILSLVFLHYLGMPSSTTSRIISVTLGIALLLTA 122

Query: 139 --------ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF--TNLLMLFY 188
                   I      R     +    ++    G + G L     VG G    T L+ML+ 
Sbjct: 123 PSVLFREKIRAWASRRSKPLGEKSTAFLTVFLGFLLGVLVSLSSVGAGAIGVTVLIMLYP 182

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
                K   +    +  +              + G   W +G +NI  ++ +L  SI   
Sbjct: 183 TLPTAKIVGSDIAHAVPLTL------------IAGSGHWLMGAINIPMLISLLVGSIPGI 230

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            L +     + +       + I+      
Sbjct: 231 ILGSLFIGKVNETVQRSVLATILLVVGLR 259



 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 6/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L +   FL G L  L  VG G + V VL   +       ++     +G+ +    P +++
Sbjct: 150 LTVFLGFLLGVLVSLSSVGAGAIGVTVLIMLY------PTLPTAKIVGSDIAHAVPLTLI 203

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   H   G IN+ +L   +       ++ SL I  V+++      A   L++G+ ++
Sbjct: 204 AGSGHWLMGAINIPMLISLLVGSIPGIILGSLFIGKVNETVQRSVLATILLVVGLRLV 261


>gi|15922708|ref|NP_378377.1| hypothetical protein ST2376 [Sulfolobus tokodaii str. 7]
 gi|15623498|dbj|BAB67486.1| 285aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 285

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 90/279 (32%), Gaps = 52/279 (18%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G +  L G+GG  V+VP+ +          SI +  A G SL     TS  +   + + 
Sbjct: 17  AGFIGSLTGLGGATVLVPIYTLFL-------SIPIEYATGASLISTIATSSGAASAYIKD 69

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
              N+KI            +V SL+  ++ +  L     I   ++ +  +         +
Sbjct: 70  RITNVKIGMGLEIATTTGAIVGSLIAHYIYEHHLAFILFIIFGIVILTSIYPQLKKASLE 129

Query: 153 FPDN--------------------------------YVKYIWGMVTGFLSGALGVGGGIF 180
            P                                  ++  I     G +SG LG+G G  
Sbjct: 130 LPKPMKPDWTTRVFQLYGKYYDVALRQEVEYYGVRWWLGEIIMFFAGMISGLLGIGSGAL 189

Query: 181 TNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
             + M +     I  +T TS  +  + A  +  +             W  G++      I
Sbjct: 190 KVIGMDWAMNLPIKVSTTTSNFMIGVTAATSSSLY------------WIFGYIQPLMAGI 237

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                ++ + + +K+   I    L + F +I+       
Sbjct: 238 TAIGVLIGSFIGSKVLPKIRNVKLRLIFMLILAFLGIEM 276



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +  F +G +SGL G+G G + V  +  A        ++ + V+  TS  +I  T+ 
Sbjct: 166 WLGEIIMFFAGMISGLLGIGSGALKVIGMDWAM-------NLPIKVSTTTSNFMIGVTAA 218

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S   +   G I   +       + I + + S ++  +    L   F +    +GI M+ 
Sbjct: 219 TSSSLYWIFGYIQPLMAGITAIGVLIGSFIGSKVLPKIRNVKLRLIFMLILAFLGIEMII 278

Query: 144 R 144
           R
Sbjct: 279 R 279


>gi|257455926|ref|ZP_05621143.1| putative membrane protein [Enhydrobacter aerosaccus SK60]
 gi|257446672|gb|EEV21698.1| putative membrane protein [Enhydrobacter aerosaccus SK60]
          Length = 245

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 67/210 (31%), Gaps = 17/210 (8%)

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           T+L +    S+++F         + +I             +  ++  H+          +
Sbjct: 45  TALCLNILVSIIAFWRFYSAKNFSWQIFIPLAITAIPMAFIGGMI--HLPSHLYKPIVGM 102

Query: 133 FCLLMGILMLKRDRLYCERKFP---DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
             +   I      +     +       +   I G V G LSG  GVGGG+F + ++LF  
Sbjct: 103 VLIFSAIYSFIFAKKLTSEQPLKQVSKWFLAIVGAVLGLLSGLTGVGGGVFLSPILLFNR 162

Query: 190 ASIYKAT-ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
            +  K     ++G   + +   L   + +G  L    P          ++ +     +  
Sbjct: 163 WASPKVVAGVASGFILVNSISGLFGVLSTGAKLPNQLP--------IWLVAVCVGGFIGA 214

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              +K    +    L    S+++       
Sbjct: 215 TYGSK---RLADPMLNKLLSLVLVIAGLKM 241


>gi|67527039|gb|AAY68308.1| putative permease [uncultured marine bacterium 66A03]
          Length = 304

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 57/291 (19%), Positives = 103/291 (35%), Gaps = 55/291 (18%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++I      G LSGLFGVGGG +M P+L            I   VA+ T    I  +S
Sbjct: 14  IFIVIGLGGFIGFLSGLFGVGGGFLMTPLLIFL--------GIPAPVAVATEANQIVASS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLM 137
           V   + H R   ++ K+    +    + + +  L+ + ++K       +  ++  F  ++
Sbjct: 66  VSGVIAHWRRKNVDFKMGTVLLLGGMVGSSLGVLLFALLEKIGQLDLVIKLSYVFFLGII 125

Query: 138 GILML------------------------------KRDRLYCERKFPDNYVKYIWGMVTG 167
           GILML                               + R    + +    V +      G
Sbjct: 126 GILMLWESVSTYIRSRKTEFYRRKLHEHNWLHGLPLKMRFRRSKLYISALVPFSIAAFVG 185

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
            LS  +GVGGG      M++  G        TS      +     L++      ++ L  
Sbjct: 186 VLSAIMGVGGGFIMVPAMIYLLGMPTSVVIGTSLFQIIFVTANVTLLQSVQTQTVDFLLA 245

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            +L F            +++   + T+   M+  + L    ++I+   S  
Sbjct: 246 GTLLF-----------GAVIGAQIGTRFGGMLRGEQLRGMLALIVLLVSIR 285



 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 9/132 (6%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M F      +  +    +A+F+ G LS + GVGGG +MVP +            +   V 
Sbjct: 163 MRFRRSKLYISALVPFSIAAFV-GVLSAIMGVGGGFIMVPAMIYLL-------GMPTSVV 214

Query: 71  MGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           +GTSL  I   T+ ++ ++  +  T++  +    +F   I   + +     +    L   
Sbjct: 215 IGTSLFQIIFVTANVTLLQSVQTQTVDFLLAGTLLFGAVIGAQIGTRFGGMLRGEQLRGM 274

Query: 130 FAIFCLLMGILM 141
            A+  LL+ I +
Sbjct: 275 LALIVLLVSIRI 286


>gi|320354957|ref|YP_004196296.1| hypothetical protein Despr_2871 [Desulfobulbus propionicus DSM
           2032]
 gi|320123459|gb|ADW19005.1| protein of unknown function DUF81 [Desulfobulbus propionicus DSM
           2032]
          Length = 426

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 98/292 (33%), Gaps = 68/292 (23%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++    +G ++G  G GGG ++ P L        +   +   +A+GT L  I   ++M  
Sbjct: 85  VLVGVCAGLITGCIGAGGGFIIAPAL--------MSAGVKGILAVGTDLFHIFAKAIMGS 136

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLM-------ISHVDKSFLNKAFAIFCLLMGI 139
           + HR+ G I++ +   ++      + +   +          +   F+   + +    +  
Sbjct: 137 VLHRKMGNISVSLAVTFLIGAIAGSTLGGYINRTIYDANPVLSDMFITSIYVVILGFLAF 196

Query: 140 L-----------------------------------------MLKRDRLYCERKFPDNYV 158
                                                     +   + +    +      
Sbjct: 197 YAMSDYLKSRSKKAVIEEGATKIAEEIPNMGKRLQAINIPPMLTFDENVTPGGRRLSAIF 256

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             I G + G  +  +GVGGG  T  + ++             GVS++      + +I   
Sbjct: 257 LVIAGFIVGMAASIMGVGGGFLTFPIFVY-----------GLGVSSMTTVGTDIFQIVFT 305

Query: 219 WGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            G   +  +++ GF+     + +L  S++   + + ++ ++    +   +++
Sbjct: 306 AGYAAISQYAVYGFIFYTLAMGMLLGSLIGIQIGSIVTKVVPGTTIRGFYAI 357



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 43/112 (38%), Gaps = 8/112 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +++A F+ G  + + GVGGG +  P+             +     +GT +  I  T+ 
Sbjct: 255 IFLVIAGFIVGMAASIMGVGGGFLTFPIFVYGL-------GVSSMTTVGTDIFQIVFTAG 307

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
            + +     +G I   +    +    I   + S++   V  + +   +AI  
Sbjct: 308 YAAISQYAVYGFIFYTLAMGMLLGSLIGIQIGSIVTKVVPGTTIRGFYAITV 359


>gi|227505504|ref|ZP_03935553.1| protein of hypothetical function DUF81 [Corynebacterium striatum
           ATCC 6940]
 gi|227197926|gb|EEI77974.1| protein of hypothetical function DUF81 [Corynebacterium striatum
           ATCC 6940]
          Length = 346

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 14/189 (7%)

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T+++S + H R G ++   +        I   + + ++S+V          +  + +G  
Sbjct: 54  TTLVSGLSHWRFGNVHWPTVFKLGVPGAIAAFIGATVLSNVSTESAAPITTLILVAIGAN 113

Query: 141 ML-----KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS-IYK 194
           ++      R +    ++          G+V GF+    G G G  +   M+  G     +
Sbjct: 114 LVWRFSRPRPKRSAYKRQHSTGFLVGLGLVGGFVDATGGGGWGPVSTSTMMAIGREQPRR 173

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
              T      L+ F A    I   W             ++ AV+ +L    +  P+A  L
Sbjct: 174 IVGTVNTAEFLVTFGATAGFIVGLWHEIVA--------HLAAVIALLIGGAITAPIAAWL 225

Query: 255 SYMIGKKYL 263
              +    L
Sbjct: 226 ISRVNPVVL 234


>gi|90579351|ref|ZP_01235161.1| predicted permease [Vibrio angustum S14]
 gi|90440184|gb|EAS65365.1| predicted permease [Vibrio angustum S14]
          Length = 254

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 100/259 (38%), Gaps = 26/259 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + + S +S TL+ L G G GL+  P+L       GI        A+ T         V +
Sbjct: 9   LFIGSLISNTLASLSGGGAGLIQFPLLIFLGLPFGI--------ALATHKVASVALGVGA 60

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            ++H R GT+++K     I    I  ++ + +I    ++    A  I  L +GI  L + 
Sbjct: 61  AIKHLRQGTLSLKFTLYVILAGAIGVIIGANLILSFPENIAEAALGILILCLGIYSLMKK 120

Query: 146 RL-----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA-T 198
            L        R     ++  +   + G L+G+L  G G+F  L ++ ++G +  +A A T
Sbjct: 121 ELGQNENAIHRDIKGMFIGGLGLAIIGILNGSLTAGTGLFVTLFLIRWFGFNYKQAVALT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
              V         +    +G             +    + ++L  S+L   L   L++  
Sbjct: 181 LVSVGLFWNGIGAVAIYQAGAP-----------IYWPWIPVLLLGSLLGGYLGAHLAHQK 229

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             + +   F  + F   F 
Sbjct: 230 SNQLIKRCFEALTFIIGFK 248


>gi|218659288|ref|ZP_03515218.1| hypothetical protein RetlI_06306 [Rhizobium etli IE4771]
          Length = 253

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 76/218 (34%), Gaps = 26/218 (11%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  L  ++    G L G+ GVGGG +M P+L   F        +    A+GT L   A
Sbjct: 1   MTFEPLYSLSGLFVGALVGITGVGGGSLMTPLLVLLF-------GVHPATAVGTDLLYAA 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIF 133
            T       H  HG IN KI+           V+   +++ VD       + +  A    
Sbjct: 54  ITKTAGTAVHGMHGRINWKIVGSLAAGSVPAAVLMLWLLAGVDRKSIGVTNTITVALGWL 113

Query: 134 CLLMGILMLKR-------DRLYCERKFPDN----YVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++  I+++ R        R   +R  P       +  I G   G L     VG G    
Sbjct: 114 LVVTAIMLVFRGSILELARRAIGDRTPPQPTTILILTVILGFGLGILVTLTSVGAGALGV 173

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSG 218
            ++L      ++ +   +    +  +     +     G
Sbjct: 174 TILLALYPRLNVREIVGSDIVHAVPLTLIGGMGYWLIG 211


>gi|260753369|ref|YP_003226262.1| hypothetical protein Za10_1133 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258552732|gb|ACV75678.1| protein of unknown function DUF81 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 261

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 92/269 (34%), Gaps = 35/269 (13%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L  ++  + G L G+ GVGGG +M P+L   F        +    A+GT L   + T  +
Sbjct: 10  LYSLSGLVIGFLVGMTGVGGGSLMTPLLILLF-------GVHPQTAVGTDLLYASATKFV 62

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAIFCLLMG 138
               H   G+++ K++          ++++ + + ++          ++    I  LL  
Sbjct: 63  GTGIHGFKGSVDWKVVTRLCAGSIPASILSLVFLHYLGMPSSTTSRIISVTLGIALLLTA 122

Query: 139 --------ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF--TNLLMLFY 188
                   I      R     K    ++    G + G L     VG G    T L+ML+ 
Sbjct: 123 PSVLFREKIRAWASRRSKPLGKKSTAFLTIFLGFLLGVLVSLSSVGAGAIGVTVLIMLYP 182

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
                K   +    +  +              + G   W +G +NI  ++ +L  SI   
Sbjct: 183 TLPTAKIVGSDIAHAVPLTL------------IAGSGHWLMGAINIPMLISLLVGSIPGI 230

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            L +     + +       + I+      
Sbjct: 231 ILGSLFIGKVNETVQRSVLATILLVVGLR 259



 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 6/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I   FL G L  L  VG G + V VL   +       ++     +G+ +    P +++
Sbjct: 150 LTIFLGFLLGVLVSLSSVGAGAIGVTVLIMLY------PTLPTAKIVGSDIAHAVPLTLI 203

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   H   G IN+ +L   +       ++ SL I  V+++      A   L++G+ ++
Sbjct: 204 AGSGHWLMGAINIPMLISLLVGSIPGIILGSLFIGKVNETVQRSVLATILLVVGLRLV 261


>gi|118497963|ref|YP_899013.1| hypothetical protein FTN_1389 [Francisella tularensis subsp.
           novicida U112]
 gi|194323186|ref|ZP_03056970.1| domain protein of unknown function, putative [Francisella
           tularensis subsp. novicida FTE]
 gi|118423869|gb|ABK90259.1| conserved hypothetical membrane protein [Francisella novicida U112]
 gi|194322550|gb|EDX20030.1| domain protein of unknown function, putative [Francisella
           tularensis subsp. novicida FTE]
          Length = 249

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 100/262 (38%), Gaps = 28/262 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +I+  F+ G   GL G GG ++ VP+L+           +  H A+  SL V+  T++ 
Sbjct: 2   FLIIFGFICGIALGLTGGGGSILAVPLLTY-------GVGLDFHSAVTISLLVVGFTAIF 54

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + +   I+       I    +   + S +   +    L  +F+I  +L+G   L +
Sbjct: 55  GLIVNYKQHDIHYIAAAVMICTGVVFAPIGSYISQGLSDKLLMLSFSILMILIGAWSLLK 114

Query: 145 DRLYCERK--------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKA 195
            ++    +                I G V G L+G  GVGGG      ++F     I +A
Sbjct: 115 AKIMSSSQKSVCKSIGSRCIVALLISGAVVGTLTGFFGVGGGFLIVPALVFITAMPIKRA 174

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TS  V  +++    +      +    +        +     + +  S +   LATK+ 
Sbjct: 175 INTSLLVIFVVSISGFISH----YDKTNM--------SWYIASMFIVGSAIGMLLATKVK 222

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
             +  K L   F++++     V
Sbjct: 223 KSLNDKVLQTIFAIMLVILGVV 244



 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 7/121 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++++  + GTL+G FGVGGG ++VP L           ++ +  A+ TSL VI   S
Sbjct: 134 IVALLISGAVVGTLTGFFGVGGGFLIVPALVFI-------TAMPIKRAINTSLLVIFVVS 186

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +  F+ H     ++  I   +I    I  ++ + +   ++   L   FAI  +++G+++ 
Sbjct: 187 ISGFISHYDKTNMSWYIASMFIVGSAIGMLLATKVKKSLNDKVLQTIFAIMLVILGVVIY 246

Query: 143 K 143
            
Sbjct: 247 L 247


>gi|254373315|ref|ZP_04988803.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151571041|gb|EDN36695.1| conserved hypothetical protein [Francisella novicida GA99-3549]
          Length = 249

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 100/262 (38%), Gaps = 28/262 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +I+  F+ G   GL G GG ++ VP+L+           +  H A+  SL V+  T++ 
Sbjct: 2   FLIIFGFICGIALGLTGGGGSILAVPLLTY-------GVGLDFHSAVTISLLVVGFTAIF 54

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + +   I+       I    +   + S +   +    L  +F+I  +L+G   L +
Sbjct: 55  GLIVNYKQHDIHYIAAAVMICTGVVFAPIGSYISQGLSDKLLMLSFSILMILIGAWSLLK 114

Query: 145 DRLYCERK--------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKA 195
            ++    +                I G V G L+G  GVGGG      ++F     I +A
Sbjct: 115 AKIMSSSQKSVCKSIGSRCIVALLISGAVVGTLTGFFGVGGGFLIVPALVFITAMPIKRA 174

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TS  V  +++    +              +    ++     + +  S +   LATK+ 
Sbjct: 175 INTSLLVIFVVSISGFIS------------HYDKANMSWYIASMFIVGSAIGMLLATKVK 222

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
             +  + L   F++++     V
Sbjct: 223 KSLNDRVLQTIFAIMLVILGVV 244



 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 7/121 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++++  + GTL+G FGVGGG ++VP L           ++ +  A+ TSL VI   S
Sbjct: 134 IVALLISGAVVGTLTGFFGVGGGFLIVPALVFI-------TAMPIKRAINTSLLVIFVVS 186

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +  F+ H     ++  I   +I    I  ++ + +   ++   L   FAI  +++G+++ 
Sbjct: 187 ISGFISHYDKANMSWYIASMFIVGSAIGMLLATKVKKSLNDRVLQTIFAIMLVILGVVIY 246

Query: 143 K 143
            
Sbjct: 247 L 247


>gi|218661840|ref|ZP_03517770.1| hypothetical conserved membrane protein [Rhizobium etli IE4771]
          Length = 261

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 83/248 (33%), Gaps = 25/248 (10%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G +  + G GGGL+ VP +  A    GI         +GT+       S  + + + R+G
Sbjct: 20  GFVDAIAG-GGGLITVPAMLIA----GIPPLQT----LGTNKVQSIFGSASATLAYARNG 70

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY---CE 150
            + +        +  +   + + + + V    L     +  L + I    +  L      
Sbjct: 71  HVQLHEQLPMALMAVVGGAIGAALATIVPGQVLQAIMPVLLLAIAIFFAVKPNLNDLDKH 130

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
           R               GF  G  G G G  F    +   G  + KATA +  ++      
Sbjct: 131 RIITPFVFGLTLVPAIGFYDGVFGPGTGSFFMLAFVTLAGFGVLKATAHTKLLNFGSNLG 190

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           AL+V              S G +     L++     L   L ++L+  IG K +     +
Sbjct: 191 ALIVFA------------SFGAILWKIGLLMGFCQFLGAQLGSRLAMRIGAKLIKPLLVI 238

Query: 270 IMFTTSFV 277
           +    +  
Sbjct: 239 VCVALAVK 246



 Score = 35.8 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 42/113 (37%), Gaps = 13/113 (11%)

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           GF+    G GGG+ T   ML  G    +   T+   S   +  A L    +         
Sbjct: 20  GFVDAIAG-GGGLITVPAMLIAGIPPLQTLGTNKVQSIFGSASATLAYARN--------- 69

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              G V +   L +  ++++   +   L+ ++  + L     +++   +  FA
Sbjct: 70  ---GHVQLHEQLPMALMAVVGGAIGAALATIVPGQVLQAIMPVLLLAIAIFFA 119


>gi|167010238|ref|ZP_02275169.1| hypothetical protein Ftulh_05835 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254367360|ref|ZP_04983386.1| hypothetical protein FTHG_00585 [Francisella tularensis subsp.
           holarctica 257]
 gi|134253176|gb|EBA52270.1| hypothetical protein FTHG_00585 [Francisella tularensis subsp.
           holarctica 257]
          Length = 366

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 103/266 (38%), Gaps = 27/266 (10%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMH 68
           +M     +        I+   FL+  +  + G GGGL+ +P LS     ++ +  +    
Sbjct: 108 MMQHFFAEHFYILCVFIVSMGFLASFIDAIAG-GGGLISIPALSLTGLPIVTVLGTNKFQ 166

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
            ++GT + V         +++ + G I++K +   +    I     +L+   +   F+N 
Sbjct: 167 ASIGTGMAV---------LKYYKSGLIDIKTVIRGLVAGFIGACCGTLLTLLIHNDFMNN 217

Query: 129 AFAIFCLLMGILMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
              I  + + I  +    L     +++  +     ++G + G   G  G G G    + +
Sbjct: 218 IVPILLIDVFIFSIVNKNLGVAQGKKRMSEVAFFTLFGFILGAYDGFFGPGTGNLWIIAI 277

Query: 186 LFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +++ G +  +A+  +  ++      +L V   SG             VNI   L++   S
Sbjct: 278 VYFLGYTFLQASGYAKMLNLKSNVFSLTVFALSGQ------------VNIAFGLLMALGS 325

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMI 270
                  +++  + G K +   F ++
Sbjct: 326 FFCGIAGSRMVILKGSKLVRPIFIIV 351


>gi|329733204|gb|EGG69541.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           21193]
          Length = 256

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +II+  F++  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   LTMIIIIILFGFIAAFIDSVVG-GGGLISTPALLAI--------GLPPSVALGTNKLASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+ S ++  R G +++ ++      + + +   + + + V    L     I    + I
Sbjct: 56  FGSLTSTIKFIRSGKVDLFVVAKLFGFVFLASACGAYIATMVPSQILKPLIIIALSSVFI 115

Query: 140 LMLKRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             L +      R      F    +     ++ GF  G +G G G F   ++L +G     
Sbjct: 116 FTLLKKDWGNTRTFTQFTFKKAIIFAALFILIGFYDGFVGGGTGSFMLFVLLVFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A   +  ++      AL++ +  G
Sbjct: 176 AAGNAKVLNFASNIGALVLFMVLG 199


>gi|218682287|ref|ZP_03529888.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 894]
          Length = 261

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 84/248 (33%), Gaps = 25/248 (10%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G +  + G GGGL+ VP +     + GI         +GT+       +  + + + R G
Sbjct: 20  GFVDAIAG-GGGLITVPAML----ISGIPPLQT----LGTNKVQSIFGAASATLAYARKG 70

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR---LYCE 150
            + ++       +  +   + + + + V    L     +  L + I    +     L   
Sbjct: 71  HVQLQEQLPMALMAVMGGALGAALATIVPGQVLQAIMPVLLLAIAIFFAVKPNLDDLDKH 130

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFP 209
           R               GF  G  G G G F  L  +   G  + KATA +  ++      
Sbjct: 131 RLITPFAFGLTLVPAIGFYDGVFGPGTGSFFMLGFVTLAGFGVLKATAHTKLLNFGSNLG 190

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           AL+V              S G +     L++     L   L ++L+  IG K +     +
Sbjct: 191 ALIVFA------------SFGAILWKIGLLMGVCQFLGAQLGSRLAMRIGAKLIKPLLVI 238

Query: 270 IMFTTSFV 277
           +    +  
Sbjct: 239 VCVALAVK 246



 Score = 36.2 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 13/113 (11%)

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           GF+    G GGG+ T   ML  G    +   T+   S   A  A L              
Sbjct: 20  GFVDAIAG-GGGLITVPAMLISGIPPLQTLGTNKVQSIFGAASATLAYARK--------- 69

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              G V +   L +  ++++   L   L+ ++  + L     +++   +  FA
Sbjct: 70  ---GHVQLQEQLPMALMAVMGGALGAALATIVPGQVLQAIMPVLLLAIAIFFA 119


>gi|91776023|ref|YP_545779.1| hypothetical protein Mfla_1670 [Methylobacillus flagellatus KT]
 gi|91710010|gb|ABE49938.1| protein of unknown function DUF81 [Methylobacillus flagellatus KT]
          Length = 289

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 95/266 (35%), Gaps = 21/266 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I++ F  G L G+ GVGGG +M P+L   F    +       VA+GT L   A T    
Sbjct: 29  YILSGFAVGFLVGITGVGGGSLMTPLLVFLFGFKPV-------VAVGTDLLFAALTKTGG 81

Query: 86  FMEHR-RHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIFCLLMG 138
              H   H +++ K++          +VVT  +I H+          +  A  I  +L  
Sbjct: 82  VWVHHGTHKSVDWKVVGLLSAGSLPVSVVTIYVIKHLMAIGKEISGLITYALGIALILTA 141

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             +L R  L   +           G  TG       +  G     L+         A  T
Sbjct: 142 CALLVRSILMRNKVREVEQGIISTGRFTGSTQVTATILTGAVLGALVTLSSVG-AGALGT 200

Query: 199 SAG------VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            A       +S L      L        + G+  W+LG V+   +  +L  S+    + +
Sbjct: 201 IAILLLYPKMSTLKVVGTDLAHAIPLTAIAGIGHWTLGHVDFALLGSLLIGSLPGIWIGS 260

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVF 278
            LS  I +K L    ++I+      F
Sbjct: 261 HLSAKIPEKVLRPILAVILLLIGLKF 286



 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 6/121 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +   I+   + G L  L  VG G +    +   +        +     +GT L    P +
Sbjct: 174 VTATILTGAVLGALVTLSSVGAGALGTIAILLLY------PKMSTLKVVGTDLAHAIPLT 227

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++ + H   G ++  +L   +        + S + + + +  L    A+  LL+G+  +
Sbjct: 228 AIAGIGHWTLGHVDFALLGSLLIGSLPGIWIGSHLSAKIPEKVLRPILAVILLLIGLKFV 287

Query: 143 K 143
            
Sbjct: 288 L 288


>gi|324998253|ref|ZP_08119365.1| hypothetical protein PseP1_05773 [Pseudonocardia sp. P1]
          Length = 304

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 92/262 (35%), Gaps = 24/262 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  V   L+  + G  G+  G+      +    + GI+ +     A  +       T+
Sbjct: 4   LIVFAVVGLLAQLVDGALGMAYGVTS----TSLLLVAGINPAT----ASASVHLAEVGTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   H R G ++ K++        +   + +  +S +         +   L +G+ +L
Sbjct: 56  LASGAAHWRFGNVDWKLVLKLGVPGAVGAFLGATALSALSTENAAPYMSGILLALGVYIL 115

Query: 143 KRDRLYC------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
            R  +         R           G+V GF+  + G G G  +   +L  G +  +  
Sbjct: 116 LRFSVRPPKVATARRSPHGAKFLSPLGLVAGFVDASGGGGWGPVSTPALLGAGKTAPRTV 175

Query: 197 ATSAGVS-ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             S   S  ++A  A L  +  G G   L P++        +  +L   IL  PLA  L 
Sbjct: 176 VGSVDTSEFMVAVAASLGFLI-GIGHEVLDPYT--------IGGLLIGGILAAPLAAWLV 226

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
             I    L      I+  T+  
Sbjct: 227 TKIPAPVLGTAVGGIIILTNAR 248


>gi|170741286|ref|YP_001769941.1| hypothetical protein M446_3097 [Methylobacterium sp. 4-46]
 gi|168195560|gb|ACA17507.1| protein of unknown function DUF81 [Methylobacterium sp. 4-46]
          Length = 307

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 100/306 (32%), Gaps = 56/306 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + +++      G +SG+FG+GGG +M P+L       GI  +    +
Sbjct: 1   MQIYLPIAEMPVSVLMLLGLGAAVGFVSGVFGIGGGFLMTPILIVL----GIPPA----I 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T    I  +S  S +   R G +++++    +    + T +     + + ++     
Sbjct: 53  AVATQTAPIVASSTTSVLAALRRGALDIRLGLVLVGGGLLGTALGVWFFAAMRRAGQLDL 112

Query: 130 FAIFCL-----LMGILMLKRD-------------RLYCERKFP----------------- 154
           F          ++G LML+                    R+ P                 
Sbjct: 113 FITLAYVTLFSVVGGLMLRESLRDLWARRGGRAAPPRAGREHPAYMAWPLRMRFPRSRLY 172

Query: 155 -DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                     +  GF    LG+GGG      +L+           TS        F AL+
Sbjct: 173 ASVLPILGLALFVGFAGAVLGIGGGFILVPALLYLLRVPTGVVVGTSQFQILWTTFVALV 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           +                  V+I   +I++  S+       +L   +      +  ++++ 
Sbjct: 233 LHAVQNQA-----------VDIVLAVILIAGSVFGAQFGARLGRNLRADTFRLLLAVLVL 281

Query: 273 TTSFVF 278
                F
Sbjct: 282 AVDLRF 287



 Score = 45.1 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 51/136 (37%), Gaps = 8/136 (5%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +   +  I+  +   G    + G+GGG ++VP L    +       +   V +GTS   I
Sbjct: 171 LYASVLPILGLALFVGFAGAVLGIGGGFILVPALLYLLR-------VPTGVVVGTSQFQI 223

Query: 79  APTSVMSFMEHR-RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
             T+ ++ + H  ++  +++ +    I          + +  ++         A+  L +
Sbjct: 224 LWTTFVALVLHAVQNQAVDIVLAVILIAGSVFGAQFGARLGRNLRADTFRLLLAVLVLAV 283

Query: 138 GILMLKRDRLYCERKF 153
            +  +    L+    F
Sbjct: 284 DLRFVLELALHPAEPF 299


>gi|330446657|ref|ZP_08310309.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490848|dbj|GAA04806.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 254

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 95/259 (36%), Gaps = 26/259 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + + S +S TL+ L G G GL+  P+L       GI        A+ T         V +
Sbjct: 9   LFIGSLISNTLASLSGGGAGLIQFPLLIFLGLPFGI--------ALATHKVASVALGVGA 60

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            ++H R GT++       I    I  ++ + +I    +     A  I  + +GI  L + 
Sbjct: 61  ALKHLRQGTLSWGFTLYVILTGAIGVILGAHLILSFPEHIAEAALGILIISLGIYSLMKK 120

Query: 146 RL-----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA-T 198
            L        R      +  +     G L+G+L  G G+F  L ++ ++G +  +A A T
Sbjct: 121 ELGQNENSINRDTKGMVIGGLGLATIGVLNGSLTAGTGLFVTLFLVRWFGFNYKQAVALT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
              V         +    +G             +    + ++L  S+L   L   L++  
Sbjct: 181 LVSVGLFWNGIGAVAIYQAGAP-----------IYWPWIPVLLLGSLLGGYLGAHLAHQK 229

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             + +   F  + F   F 
Sbjct: 230 SNQLIKRCFEALTFIIGFK 248


>gi|297543867|ref|YP_003676169.1| hypothetical protein Tmath_0381 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296841642|gb|ADH60158.1| protein of unknown function DUF81 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 253

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 97/267 (36%), Gaps = 29/267 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++YI  +    F +  +  + G GGG++ +P L       G+  +     A+GT+    +
Sbjct: 3   IEYIVALCGIGFAAAFIDSIAG-GGGIISLPGLLVL----GVPPAF----ALGTNKFAAS 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  S +   ++   +  +LK  +F   +  ++    +  +D S L     I  + + I
Sbjct: 54  CASFTSSLTFIKYRVYDGDLLKYLVFGTLLGAILGVKTVLLLDSSQLRIIIIILMIFVAI 113

Query: 140 LMLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIY 193
             L    +  E K          +  I  ++ GF  G  G G G F   L +        
Sbjct: 114 YTLFAKNIGNENKVKGVNKKTIAIGLIISIILGFYDGFFGPGTGSFYIFLFLTLLNYDFK 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            +      ++ +    +L++    G  L     +S+        + +    IL   L TK
Sbjct: 174 MSAGNGKILNFVSNITSLIMFALHGKIL-----YSI-------AIPMALAMILGARLGTK 221

Query: 254 LSYMIGKKYLTIGFS--MIMFTTSFVF 278
           L+   G + +        +++    +F
Sbjct: 222 LAIKNGARLIRPILISVTLLYAVKMIF 248


>gi|124266697|ref|YP_001020701.1| hypothetical protein Mpe_A1504 [Methylibium petroleiphilum PM1]
 gi|124259472|gb|ABM94466.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 255

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 92/260 (35%), Gaps = 36/260 (13%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D+I ++I   F  G + G+ GVGGG +M P++   F        +   VA+GT L    
Sbjct: 1   MDFIAVLI--GFGVGAIVGMTGVGGGSLMTPLMLGVF-------GLPPAVAIGTDLWFAG 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM-----ISHVDKSFLNKAFAIFC 134
            T +   + H R   I+  ILK  +       + T  +     ++    S L  A  I  
Sbjct: 52  LTKISGSIAHWRQQHIDHDILKQLLMGSIPAALATIALMHATGVTKAWASALTLALGIAL 111

Query: 135 LLMGILMLKRDRLYCE--------RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
           L+  + +  R   +           +          G+V G L     +G G     L+L
Sbjct: 112 LITAVTVAYRQAWHAVGLKLERWLPQERKAAWTVASGVVLGVLVSLSSIGAGAIGATLIL 171

Query: 187 FY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
                    +   T    +  +   A +               +LG V+   ++ +L  S
Sbjct: 172 LLHPRIETRRLVGTDIAHAVPLTLVAGIGHA------------TLGHVDWLLLVTLLVGS 219

Query: 245 ILITPLATKLSYMIGKKYLT 264
           I    +  +L+  +  + + 
Sbjct: 220 IPGIWIGAQLTRQLPDRLVR 239


>gi|237746148|ref|ZP_04576628.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
 gi|229377499|gb|EEO27590.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
          Length = 251

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 77/215 (35%), Gaps = 26/215 (12%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           ++ +H A+GTSL  +  T+V     H R G +N+K+             + S + +    
Sbjct: 30  NVPIHTAVGTSLAAMIFTTVSGAFSHFREGNLNVKVGAAVGIAGAAGAFLGSKISTLFPA 89

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK-------------YIWGMVTGFLS 170
           + L    A   +   +L+  R        F     +              + G+  G LS
Sbjct: 90  AELKYCTASMLIASAVLVYTRLSYPNLPLFHTKEGQKPVTEGARFWILAVLAGIGNGLLS 149

Query: 171 GALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G  G G   F  L L++F+   ++++  T+  +   IA       + SG+    L     
Sbjct: 150 GTFGFGAAQFIQLSLLIFFAMPLFQSVGTTMLIILPIAAFGGFGYLLSGYLDFML----- 204

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
                   + +L   ++      K + +  + +L 
Sbjct: 205 -------FIQVLLGLMIGAYTGAKFTRLAPRWFLK 232



 Score = 38.5 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 49/125 (39%), Gaps = 7/125 (5%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  L ++A   +G LSG FG G    +   L   F       ++ +  ++GT++ +I P 
Sbjct: 134 FWILAVLAGIGNGLLSGTFGFGAAQFIQLSLLIFF-------AMPLFQSVGTTMLIILPI 186

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +      +   G ++  +    +  L I     +       + FL     +   + G+LM
Sbjct: 187 AAFGGFGYLLSGYLDFMLFIQVLLGLMIGAYTGAKFTRLAPRWFLKWMMVLLPGVAGVLM 246

Query: 142 LKRDR 146
           +   R
Sbjct: 247 IVVKR 251


>gi|306817659|ref|ZP_07451401.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|304649473|gb|EFM46756.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
          Length = 355

 Score = 59.3 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 7/119 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +    +     G ++G  G+GGG++ VPVL               H A+  SL V+  +S
Sbjct: 3   LIFAALIGVGVGMVAGSLGIGGGMLAVPVLVYLL-------GQDPHAAVAESLVVVLASS 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             +     R G + +     +     +   + + +   +    +  AFA    ++  LM
Sbjct: 56  AAALPSRFRRGQVRLGTGLIFGMCSLVGAGIGTWLNRAISGEVVMLAFAALLAVVSALM 114



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 49/137 (35%), Gaps = 26/137 (18%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V   L+G L   FG+GGG  +VP+L    +         + VA GTS  V++  S
Sbjct: 219 LPMFLVLGTLTGILVSFFGIGGGFAVVPLLVLVMRY-------PIRVAQGTSFIVMSVVS 271

Query: 83  VMSFMEHRRHG-------------------TINMKILKDWIFVLPITTVVTSLMISHVDK 123
           V S +                          ++  +   +     I   + S + +    
Sbjct: 272 VASILTRVLEPVVMAALAGMAGGIVPTEPLRVDWLVALAFALCSGIGASIGSPLSNRARA 331

Query: 124 SFLNKAFAIFCLLMGIL 140
           S L  AF    + + + 
Sbjct: 332 STLTFAFVGLLVAIAVY 348



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 8/129 (6%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G +TG L    G+GGG     L++      I  A  TS  V ++++  ++L R+
Sbjct: 220 PMFLVLGTLTGILVSFFGIGGGFAVVPLLVLVMRYPIRVAQGTSFIVMSVVSVASILTRV 279

Query: 216 YSGWGLNGLPPWSLGF-------VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
                +  L   + G        V+    L     S +   + + LS       LT  F 
Sbjct: 280 LEPVVMAALAGMAGGIVPTEPLRVDWLVALAFALCSGIGASIGSPLSNRARASTLTFAFV 339

Query: 269 MIMFTTSFV 277
            ++   +  
Sbjct: 340 GLLVAIAVY 348



 Score = 42.4 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 13/120 (10%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
            + G+  G ++G+LG+GGG+    ++++  G   + A A S  V    +  AL  R    
Sbjct: 7   ALIGVGVGMVAGSLGIGGGMLAVPVLVYLLGQDPHAAVAESLVVVLASSAAALPSR---- 62

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                   +  G V +G  LI    S++   + T L+  I  + + + F+ ++   S + 
Sbjct: 63  --------FRRGQVRLGTGLIFGMCSLVGAGIGTWLNRAISGEVVMLAFAALLAVVSALM 114


>gi|77024993|gb|ABA61419.1| conserved hypothetical transmembrane protein [uncultured marine
           group II euryarchaeote HF70_39H11]
          Length = 265

 Score = 59.3 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 89/264 (33%), Gaps = 25/264 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++V  F  G +    G+GGG++ VP+L          + I       TSL +    S  
Sbjct: 8   IVLVLVFTVGFVFAPLGLGGGMLFVPILHYIAGWPIGGELIL------TSLMLTGVVSWG 61

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI---LM 141
           S + HRR   ++  I+K  +       V+ ++++S +D         +   ++G      
Sbjct: 62  SGLVHRRESLMDESIVKIALRGAIPGAVLGAIIVSLLDDKLDFTFKLVTMFVVGWANYKT 121

Query: 142 LKRDRLYCER-------KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            K+ R    R       +  + +V    GM     S      G I+  +   + G    K
Sbjct: 122 WKKMRGESSRISEPMHTELREGWVTAGAGMGGLACSSMAIGAGAIYIPVFHEYGGLRARK 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A  TS G    +   A+L           LP W+        ++ +            K 
Sbjct: 182 AIGTSLGTMMFVVPTAILSHAI--LLQGQLPDWAW-------LVSLPLAVFAGANSGAKF 232

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
                   +   F +++      +
Sbjct: 233 GMRFDDGVILKCFLVLISIIFIRY 256


>gi|66825573|ref|XP_646141.1| hypothetical protein DDB_G0269644 [Dictyostelium discoideum AX4]
 gi|60474235|gb|EAL72172.1| hypothetical protein DDB_G0269644 [Dictyostelium discoideum AX4]
          Length = 549

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 53/113 (46%), Gaps = 8/113 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L+ + S ++G L+ L G+GGG++  PVL      MG+   +       TS  +I  TS
Sbjct: 406 ILLLGILSVIAGCLASLLGIGGGMIKGPVLL----QMGLVPDVTA----ATSSYMILFTS 457

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
             S +++   G +       +  +  ++  + +  +  + K +  +++ +F +
Sbjct: 458 ASSAIQYILVGKLRWDYGIVYYVIGFVSCFIGTQTLIWIVKKYQRRSYIVFLI 510



 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
            +  I  ++ G L+  LG+GGG+    ++L  G       ATS+ +    +  + +  I 
Sbjct: 407 LLLGILSVIAGCLASLLGIGGGMIKGPVLLQMGLVPDVTAATSSYMILFTSASSAIQYIL 466

Query: 217 SG---WGLNGLPPWSLGFVN 233
            G   W   G+  + +GFV+
Sbjct: 467 VGKLRWDY-GIVYYVIGFVS 485


>gi|258507065|ref|YP_003169816.1| hypothetical protein LGG_00070 [Lactobacillus rhamnosus GG]
 gi|257146992|emb|CAR85965.1| Conserved protein [Lactobacillus rhamnosus GG]
 gi|259648435|dbj|BAI40597.1| conserved hypothetical protein [Lactobacillus rhamnosus GG]
          Length = 228

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 74/210 (35%), Gaps = 13/210 (6%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +  S      +  +    ++  G ++ ++         +  ++   +   +  S++    
Sbjct: 25  LAFSFLAFIISGWLGSRHYQHEGLMDRRVAYLLSGGSFVGAIIGVRLNLLLPTSWVQFLL 84

Query: 131 AIFCLLMGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
            +  LL GI +L + R   +          +  I G+VTG +    G GG +    L++ 
Sbjct: 85  YLVVLLSGIAILIQQRHPPKPGVNHLNQPILLVILGVVTGLICALSGAGGPVLVMPLLVL 144

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
            G   + A   +   S  I+ PA +  +     +  LP           + II+    + 
Sbjct: 145 LGCEPHAAVGIALLNSVFISLPAAVGYLSQVQFMTTLPL----------LAIIIVTHGIG 194

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             + +++   I  + L  G ++       +
Sbjct: 195 VIVGSRIGPKIDGRLLKNGTAIFSIILGCI 224


>gi|115314497|ref|YP_763220.1| hypothetical protein FTH_0624 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|115129396|gb|ABI82583.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica OSU18]
          Length = 366

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 103/266 (38%), Gaps = 27/266 (10%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMH 68
           +M     +        I+   FL+  +  + G GGGL+ +P LS     ++ +  +    
Sbjct: 108 MMQHFFAEHFYILCVFIVSMGFLASFIDAIAG-GGGLISIPALSLTGLPIVTVLGTNKFQ 166

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
            ++GT + V         +++ + G I++K +   +    I     +L+   +   F+N 
Sbjct: 167 ASIGTGMAV---------LKYYKSGLIDIKTVIRGLVAGFIGACCGTLLTLLIHNDFMNN 217

Query: 129 AFAIFCLLMGILMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
              I  + + I  +    L     +++  +     ++G + G   G  G G G    + +
Sbjct: 218 IVPILLIAVFIFSIVNKNLGVAQGKKRMSEVAFFTLFGFILGAYDGFFGPGTGNLWIIAI 277

Query: 186 LFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +++ G +  +A+  +  ++      +L V   SG             VNI   L++   S
Sbjct: 278 VYFLGYTFLQASGYAKMLNLKSNVFSLTVFALSGQ------------VNIAFGLLMALGS 325

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMI 270
                  +++  + G K +   F ++
Sbjct: 326 FFGGIAGSRMVILKGSKLVRPIFIIV 351


>gi|40063014|gb|AAR37870.1| membrane protein, putative [uncultured marine bacterium 560]
          Length = 263

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 93/261 (35%), Gaps = 24/261 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +  + V + ++G +  L G GGGL+  P L     L GI         +GT+    + 
Sbjct: 20  EILTFLFVIAIIAGFIDTLVG-GGGLLAFPALL----LSGIPPIYV----LGTNKFQGSM 70

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            + ++     R   +N + +K  +    I +++  +++  +D   L+    I  +++ I 
Sbjct: 71  GTGIATFLLFRKKKLNWETIKYLMLASFIGSIIGGVIVQFIDTELLSFVIPIVLVVIAIY 130

Query: 141 MLKRDRLYCERKFPDNYVKY--IWGMVTGFLSGALGVGGGIFTNLL-MLFYGASIYKATA 197
            +   +     K  +    +        GF  G  G G G F  +  ++     I +AT 
Sbjct: 131 FIISPKPKVITKNSETNKNFEKYAVPTVGFYDGMFGPGAGSFFVMTGVMLKKLEIIQATI 190

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  ++        +V             +S G +     LI++   ++     T     
Sbjct: 191 LAKPLNFASNIAGFIVF------------FSFGHIAFIIGLIMMLGQLIGAFFGTHYLLK 238

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
              K + I   ++       +
Sbjct: 239 ANPKVIRILIVVMSLLMLARY 259


>gi|32033525|ref|ZP_00133852.1| COG0730: Predicted permeases [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208361|ref|YP_001053586.1| hypothetical protein APL_0885 [Actinobacillus pleuropneumoniae L20]
 gi|190150213|ref|YP_001968738.1| hypothetical protein APP7_0944 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303251256|ref|ZP_07337434.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307245749|ref|ZP_07527835.1| Permease with 5 transmembrane domains [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307250125|ref|ZP_07532087.1| Permease with 5 transmembrane domains [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307252512|ref|ZP_07534408.1| Permease with 5 transmembrane domains [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307254721|ref|ZP_07536548.1| Permease with 5 transmembrane domains [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259162|ref|ZP_07540892.1| Permease with 5 transmembrane domains [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307261370|ref|ZP_07543045.1| Permease with 5 transmembrane domains [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|307263552|ref|ZP_07545167.1| Permease with 5 transmembrane domains [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|126097153|gb|ABN73981.1| hypothetical protein APL_0885 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|189915344|gb|ACE61596.1| hypothetical protein APP7_0944 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|302649798|gb|EFL79976.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306853451|gb|EFM85670.1| Permease with 5 transmembrane domains [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306857856|gb|EFM89950.1| Permease with 5 transmembrane domains [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306860104|gb|EFM92121.1| Permease with 5 transmembrane domains [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306862247|gb|EFM94214.1| Permease with 5 transmembrane domains [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866829|gb|EFM98687.1| Permease with 5 transmembrane domains [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306869101|gb|EFN00903.1| Permease with 5 transmembrane domains [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306871195|gb|EFN02924.1| Permease with 5 transmembrane domains [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 258

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 81/206 (39%), Gaps = 13/206 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +   D + ++   + ++G +  + G GGGL+ +P L            I   +A+GT+  
Sbjct: 2   ELSFDVLAMLFTIATIAGFIDAIAG-GGGLLTIPALL--------SAGIPPTMALGTNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                S  + +   R   +N++ +   I +  I     ++ +  +D + L        L+
Sbjct: 53  QACGGSFSASLYFVRQKAVNLRQISLLILLTFIGAACGTIFVQMIDVNSLKMLLPFLVLI 112

Query: 137 MGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           +GI  L    +  E   ++       +      GF  G  G   G F  L  +L  G ++
Sbjct: 113 IGIYFLFSPTVGNEDRKQRISFPLFAFSAAAGIGFYDGMFGPATGSFFTLAFILLLGFNL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSG 218
            KA A +  ++    F +L+  +  G
Sbjct: 173 PKAVAHAKVLNFTSNFASLIFFMLGG 198


>gi|255036228|ref|YP_003086849.1| hypothetical protein Dfer_2466 [Dyadobacter fermentans DSM 18053]
 gi|254948984|gb|ACT93684.1| protein of unknown function DUF81 [Dyadobacter fermentans DSM
           18053]
          Length = 293

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 72/200 (36%), Gaps = 13/200 (6%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS-HVDKSFLNKAFAIFCLLM 137
             T+  S + H R   IN K+ K  +    +  +  + ++S  +D  F+    A + L++
Sbjct: 100 MFTTGASAISHFRFKNINKKLFKSLLIPGVLGAIAGAYLLSDVIDGDFIKPFIAFYMLIL 159

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           G++++++       K     +  +     GFL    G G G      +L  G        
Sbjct: 160 GVIIIRKALQKTFVKNKTKRISVLAAAG-GFLDSIGGGGWGPIVTSTLLGQGRDPRYTIG 218

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +       +AF + +  +              G  +   VL ++   ++  P+   +   
Sbjct: 219 SVNAAEFAVAFASGITFMLF-----------TGVDSWKVVLGLIVGGVIAAPVGAMMVGK 267

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           I +K L +    ++   S  
Sbjct: 268 IKRKPLMLLVGTLVIGLSIR 287


>gi|57505234|ref|ZP_00371163.1| probable integral membrane protein Cj1468 [Campylobacter
           upsaliensis RM3195]
 gi|57016370|gb|EAL53155.1| probable integral membrane protein Cj1468 [Campylobacter
           upsaliensis RM3195]
          Length = 256

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 95/266 (35%), Gaps = 30/266 (11%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    ++   +  +G +  + G GGGL+ +P L        +   I  H+A+ T+     
Sbjct: 5   LSVYAILFCVAIFAGFIDSIVG-GGGLITIPAL--------MASGIPPHLALATNKLQSV 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  + + + R  T  +  L   +F   +     +  +  +    L     IF  L  +
Sbjct: 56  FGSFTAAVTYFRSTT--LPHLAWGVFFTALGAAFGTWSVLLIKDEHLKLIILIFLSLTFL 113

Query: 140 LMLKRDRLYCERKFPD----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYK 194
               +  L      P          I+G+  GF  G LG G G F     + + G ++ K
Sbjct: 114 YTAFKPSLGKRESEPKIHNIKIFHIIFGLTLGFYDGFLGPGTGSFWIFACVLFLGFNMKK 173

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF-VNIGAVLIILPISILITPLATK 253
           A+  +  ++      AL + ++              + V     L++    +    L +K
Sbjct: 174 ASINTKILNFSSNIIALFIFLWF-------------YDVLWLVGLLMGVGQVFGAFLGSK 220

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVFA 279
           L      K++ + F +++  T    A
Sbjct: 221 LVLKTNGKFIKVLFLVVVGATIIKVA 246


>gi|225857397|ref|YP_002738908.1| domain of unknown function, putative [Streptococcus pneumoniae
           P1031]
 gi|225725857|gb|ACO21709.1| domain of unknown function, putative [Streptococcus pneumoniae
           P1031]
          Length = 235

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 22/238 (9%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGG+++ P L  +F    + D     +A  +S  V     + +     +   I  +++  
Sbjct: 2   GGGIIIKP-LMDSFGYHSVSD-----IAFYSSFSVFIMAIISTIKRFSQSKEIKWRLIFT 55

Query: 103 WIFVLPITTVVTSLM----ISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV 158
             F   +   +  L+    +S +    ++    I   +M ++           +F     
Sbjct: 56  VSFSSVLGGFLGHLIFQVLLSQLSVRLVSIVQMILLFVMLLVSFVLTDFKKTYQFDKIGF 115

Query: 159 KYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATATSAGVSALIAFPA-LLVRIY 216
             I G++ G +S  LG+GGG     LLM+F+  SI +AT  S  +           + + 
Sbjct: 116 YMICGLLLGLISSFLGIGGGPLNVSLLMVFFSISIKEATMYSLAIIFFSQLSHLATIVVV 175

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +G     L P          V +I   SI    L T +S ++ + ++   F  ++F  
Sbjct: 176 TGLNQYHLAP----------VPVIFLASICGGVLGTVVSKVLPENWVRYCFKGMLFFV 223


>gi|332971127|gb|EGK10092.1| transmembrane protein [Kingella kingae ATCC 23330]
          Length = 255

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 90/256 (35%), Gaps = 24/256 (9%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
            F +G +    G GGGL+ +P L            + +   +G +       ++M+ +++
Sbjct: 13  GFAAGLMDAAVG-GGGLLQIPTLFGLL-----PAHLPVATVLGINKAASCAGTLMAAVQY 66

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL-- 147
            R   +  K+L     +    +   + + + +    +  A  +  LLM +    +     
Sbjct: 67  ARKVKLAWKMLLPAAVLAFAASYGGAKLAALIPVQHMKPAMLVIMLLMFVYTFAKKDFGQ 126

Query: 148 ---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATATSAGVS 203
              +      +  +    G   G   G  G G G     + + F+     +ATA++  ++
Sbjct: 127 LVRHDALTRREWLLGLGAGAAIGLYDGVFGPGTGSLLAFVFIRFFAYDFLQATASAKIIN 186

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
                 AL   I +            G++     + +   ++L     + L+   G  +L
Sbjct: 187 LTTNLAALCYFIPN------------GYIVWEWAIPLAVANLLGGWTGSWLAVRGGTVWL 234

Query: 264 TIGFSMIMFTTSFVFA 279
             GF +++      FA
Sbjct: 235 RKGFMLLLCLLIGKFA 250


>gi|282896099|ref|ZP_06304125.1| Protein of unknown function DUF81 [Raphidiopsis brookii D9]
 gi|281199017|gb|EFA73892.1| Protein of unknown function DUF81 [Raphidiopsis brookii D9]
          Length = 263

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 101/279 (36%), Gaps = 40/279 (14%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + L+ V SF  GT+ GL G+GG  ++ P+L   FQ       +   +A+ + +    
Sbjct: 1   MDNLLLLPVLSFFIGTIVGLTGIGGASLITPMLIFIFQ-------VPPSIAISSDVVAAT 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK---------AF 130
              V+  ++H +  T++ +I+K         +++   ++  +  +               
Sbjct: 54  LMKVVGGIKHWQQKTLDTEIVKWLAMGSVSGSLIGVGVLHQLRTNGYQIDGILLKSLGIM 113

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVK-----------YIWGMVTGFLSGALGVGGGI 179
            +   L  +  +     + +   PD                + G + GF  G   V  G 
Sbjct: 114 ILIVTLAALTQMLLVTFFPQLNLPDPPGLNLKTHQGRFLTLLVGAILGFCVGMTSVSSGS 173

Query: 180 FTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
              L++   +     K   T    +A++     L  +            +LG V+   VL
Sbjct: 174 MFALVLVTLFSLDAQKLVGTDITQAAILLIFTSLGHL------------TLGTVDWSLVL 221

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            I   S+    + +KL  +  ++ L +    I+   S+ 
Sbjct: 222 PIWLGSVPGVIVGSKLCQITPQRPLKLVIYSILVMVSWR 260


>gi|145218853|ref|YP_001129562.1| hypothetical protein Cvib_0032 [Prosthecochloris vibrioformis DSM
           265]
 gi|145205017|gb|ABP36060.1| protein of unknown function DUF81 [Chlorobium phaeovibrioides DSM
           265]
          Length = 320

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 48/285 (16%), Positives = 100/285 (35%), Gaps = 48/285 (16%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++ L+ V SF+ G  + L GVGGG++ VP++S  F          +    G  L V    
Sbjct: 47  WVLLLFVFSFVLGIFAVLAGVGGGVLFVPIVSSFFPFH-------LDFVRGAGLMVALSG 99

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ +     R G  ++K+      V  ++++  ++    +    +     I  +++  +M
Sbjct: 100 AISAGAPLMRKGLADLKLGLPMALVGSLSSIAGAMAGLALPAQTVQLLLGIVIVVIATIM 159

Query: 142 LKRD----------------------------RLYCERKFPDNYVKYIWGMVTGFLSGAL 173
                                           +     +     +  I+ ++ GF+ G  
Sbjct: 160 FLSGKSGYPEVKVPDALSKALHISGIYYEESIKKDVSWQVHRTPLSLIFFLMIGFIGGMF 219

Query: 174 GVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G G     +  L  G  +  + ATS  V ++    A  V ++ G  L           
Sbjct: 220 GLGAGFANVPVFNLLMGVPLKVSVATSGLVLSINGAAAAWVYMFKGAMLP---------- 269

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + AV  I  + +L + +  KL   +    + I    ++      
Sbjct: 270 -LIAVPSIAGM-MLGSKIGAKLLTRVNTSSVRIIVVSMLAVAGIR 312



 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 7/125 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V    L ++   + G + G+FG+G G   VPV +           + + V++ TS  V++
Sbjct: 199 VHRTPLSLIFFLMIGFIGGMFGLGAGFANVPVFNLLM-------GVPLKVSVATSGLVLS 251

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                +   +   G +   I    I  + + + + + +++ V+ S +         + GI
Sbjct: 252 INGAAAAWVYMFKGAMLPLIAVPSIAGMMLGSKIGAKLLTRVNTSSVRIIVVSMLAVAGI 311

Query: 140 LMLKR 144
             L +
Sbjct: 312 RSLFK 316


>gi|307699819|ref|ZP_07636870.1| putative membrane protein [Mobiluncus mulieris FB024-16]
 gi|307614857|gb|EFN94075.1| putative membrane protein [Mobiluncus mulieris FB024-16]
          Length = 353

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 7/119 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +    +     G ++G  G+GGG++ VPVL               H A+  SL V+  +S
Sbjct: 1   MIFAALIGVGVGMVAGSLGIGGGMLAVPVLVYLL-------GQDPHAAVAESLVVVLASS 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             +     R G + +     +     +   + + +   +    +  AFA    ++  LM
Sbjct: 54  AAALPSRFRRGQVRLGTGLIFGMCSLVGAGIGTWLNRAISGEVVMLAFAALLAVVSALM 112



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 49/137 (35%), Gaps = 26/137 (18%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V   L+G L   FG+GGG  +VP+L    +         + VA GTS  V++  S
Sbjct: 217 LPMFLVLGTLTGILVSFFGIGGGFAVVPLLVLVMRY-------PIRVAQGTSFIVMSVVS 269

Query: 83  VMSFMEHRRHG-------------------TINMKILKDWIFVLPITTVVTSLMISHVDK 123
           V S +                          ++  +   +     I   + S + +    
Sbjct: 270 VASILTRVLEPVVMAALAGMAGGIVPTEPLRVDWLVALAFALCSGIGASIGSPLSNRARA 329

Query: 124 SFLNKAFAIFCLLMGIL 140
           S L  AF    + + + 
Sbjct: 330 STLTFAFVGLLVAIAVY 346



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 8/129 (6%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G +TG L    G+GGG     L++      I  A  TS  V ++++  ++L R+
Sbjct: 218 PMFLVLGTLTGILVSFFGIGGGFAVVPLLVLVMRYPIRVAQGTSFIVMSVVSVASILTRV 277

Query: 216 YSGWGLNGLPPWSLGF-------VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
                +  L   + G        V+    L     S +   + + LS       LT  F 
Sbjct: 278 LEPVVMAALAGMAGGIVPTEPLRVDWLVALAFALCSGIGASIGSPLSNRARASTLTFAFV 337

Query: 269 MIMFTTSFV 277
            ++   +  
Sbjct: 338 GLLVAIAVY 346



 Score = 42.4 bits (99), Expect = 0.070,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 13/120 (10%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
            + G+  G ++G+LG+GGG+    ++++  G   + A A S  V    +  AL  R    
Sbjct: 5   ALIGVGVGMVAGSLGIGGGMLAVPVLVYLLGQDPHAAVAESLVVVLASSAAALPSR---- 60

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                   +  G V +G  LI    S++   + T L+  I  + + + F+ ++   S + 
Sbjct: 61  --------FRRGQVRLGTGLIFGMCSLVGAGIGTWLNRAISGEVVMLAFAALLAVVSALM 112


>gi|300214089|gb|ADJ78505.1| Hypothetical membrane spanning protein [Lactobacillus salivarius
           CECT 5713]
          Length = 254

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 86/264 (32%), Gaps = 50/264 (18%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++ P+++ A  L        +  A+G S+  +  TS  S +   +   +N+++      
Sbjct: 1   MIITPIITLALGLD-------IKYAIGASIIAVIATSSGSTIAFLKDDVLNLRVAMFLEI 53

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR------------------- 146
              I  +V +++      + L   F    +     M ++ R                   
Sbjct: 54  ATTIGAIVGAILTGIFHPAILYFLFGSLLIFSSWNMYRKLRSGKEILKRAKPDKWTQKFN 113

Query: 147 -----------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYK 194
                         + +  +           G  SG LG+G G F  + M       +  
Sbjct: 114 LNSSYFDKNLNKQIDYQVENIPGGLSIMFGAGIASGMLGIGSGAFKVMAMDNAMKMPLKP 173

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           ++ATS  +  + A  +  V  ++G    G        + +   L I    ++   + +++
Sbjct: 174 SSATSNLMMGVTAAASASVYFFNGSIKPG--------IAVPLALGI----LVGAAIGSRI 221

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
              +  + + + F  I+       
Sbjct: 222 MQHLPSRVIRMIFIPILLYLGLQM 245



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 58/131 (44%), Gaps = 11/131 (8%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV--AMGT 73
            D  V+ I   +   F +G  SG+ G+G G         AF++M +D+++ M +  +  T
Sbjct: 127 IDYQVENIPGGLSIMFGAGIASGMLGIGSG---------AFKVMAMDNAMKMPLKPSSAT 177

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           S  ++  T+  S   +  +G+I   I       + +   + S ++ H+    +   F   
Sbjct: 178 SNLMMGVTAAASASVYFFNGSIKPGIAVPLALGILVGAAIGSRIMQHLPSRVIRMIFIPI 237

Query: 134 CLLMGILMLKR 144
            L +G+ M+ +
Sbjct: 238 LLYLGLQMIFK 248


>gi|288940838|ref|YP_003443078.1| hypothetical protein Alvin_1107 [Allochromatium vinosum DSM 180]
 gi|288896210|gb|ADC62046.1| protein of unknown function DUF81 [Allochromatium vinosum DSM 180]
          Length = 253

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 75/216 (34%), Gaps = 24/216 (11%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +P L  A         +    ++ T+       S  + ++  R G I  +    
Sbjct: 26  GGGLLSIPALLWA--------GLSPVESLATNKAQAVFGSGTATVQFIRRGLIAPRGTAL 77

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY---CERKFPDNYVK 159
            +    +     + ++  +D + L     +  +   +   +  RL      ++  ++   
Sbjct: 78  AVLCTFVGAAFGAWLVQRLDSTLLEGLIPLLLIAFALYFWRSPRLSDLDSHQRLNESLFA 137

Query: 160 YIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            + G+  GF  G  G G G F  L  +   G ++ +ATA S  ++      ALL  +   
Sbjct: 138 VLVGLGVGFYDGFFGPGTGTFFALGYVALLGYNLRRATAHSKALNFTSNLAALLCFVQG- 196

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
                      G +     L +    ++   +   L
Sbjct: 197 -----------GHILWPIALAMALGQMIGAWIGAHL 221


>gi|228957336|ref|ZP_04119097.1| integral membrane protein [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228802369|gb|EEM49225.1| integral membrane protein [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 255

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 76/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K     + +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 179 AGNAKLLNLGSNVGALLMFMYVG 201



 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 51/120 (42%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   ++P++ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118


>gi|229060765|ref|ZP_04198120.1| Permease [Bacillus cereus AH603]
 gi|228718412|gb|EEL70044.1| Permease [Bacillus cereus AH603]
          Length = 279

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 55/264 (20%), Positives = 102/264 (38%), Gaps = 36/264 (13%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
            F+ G L G+ G+GG  ++ P L       GI  S    VA+GT L   + T +    +H
Sbjct: 31  GFIIGGLVGVTGIGGPALLTPFLLTL----GISPS----VAVGTDLVYNSITKMFGISQH 82

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIFCLLMGILMLK 143
            +  TIN +++K        + ++  + I  +       +  +        +L  I +L 
Sbjct: 83  WKQKTINFRLVKYLAIGSIPSAIIAVVTIHFLPIFHYSREGIIKYILGYVLILAAISILI 142

Query: 144 RDRLYCERK---------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIY 193
           +   Y E                +  + G + GF+ G + VG G    + M++ Y     
Sbjct: 143 KAFFYNESTQNYFQRQTMVQKKSLTILIGAILGFIVGLISVGSGSLFAIAMIYLYQLRPS 202

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +   T    + L+   A ++ +            +LG V+   ++ +L  SI    L +K
Sbjct: 203 ELVGTDITHAFLLVTVASILNM------------NLGNVDYLLLIHLLIGSIPGVILGSK 250

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
            S  I  K L I  ++I+  +   
Sbjct: 251 FSTKIPVKPLQIFLAIIICISGLK 274



 Score = 38.9 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 7/139 (5%)

Query: 4   LLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD 63
             YN S   +  +  +V    L I+   + G + GL  VG G +    +   +QL   + 
Sbjct: 145 FFYNESTQNYFQRQTMVQKKSLTILIGAILGFIVGLISVGSGSLFAIAMIYLYQLRPSEL 204

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
                  +GT +        ++ + +   G ++  +L   +       ++ S   + +  
Sbjct: 205 -------VGTDITHAFLLVTVASILNMNLGNVDYLLLIHLLIGSIPGVILGSKFSTKIPV 257

Query: 124 SFLNKAFAIFCLLMGILML 142
             L    AI   + G+ ++
Sbjct: 258 KPLQIFLAIIICISGLKLV 276


>gi|85373080|ref|YP_457142.1| membrane protein [Erythrobacter litoralis HTCC2594]
 gi|84786163|gb|ABC62345.1| membrane protein [Erythrobacter litoralis HTCC2594]
          Length = 304

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++  FL G L+ L GVGGG ++VP +     + G        V +GTSL  I   ++ + 
Sbjct: 179 LILGFLVGILTMLMGVGGGFMLVPAMLYILGMSG-------RVVVGTSLFNILFVTMATT 231

Query: 87  MEHRRH-GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H      +++ +    +    +     + +        L    A   +L+ + ML   
Sbjct: 232 MTHALTTKAVDLVLAGLLLIGSVMGAQFGTKVALKARPDILRLVLATIVILVALRMLFGL 291

Query: 146 RLYCER 151
            +  + 
Sbjct: 292 GVQPDE 297



 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 56/292 (19%), Positives = 101/292 (34%), Gaps = 56/292 (19%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            LII    L+G LSGLFGVGGG +  P+L       GI  +    VA  ++   +   SV
Sbjct: 15  LLIIALGALTGVLSGLFGVGGGFLTTPLLIF----YGIPPT----VAAASAATQVTGASV 66

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMG 138
              + H+R G ++ ++    +       ++ +L+   +         +N  + +    +G
Sbjct: 67  SGVLAHQRQGGVDYRMGLVLVAGGVFGAMIGALLFRLLQALGQIDVVINVLYVLMLGTIG 126

Query: 139 ILMLK-------------------------------RDRLYCERKFPDNYVKYIWGMVTG 167
            LM++                               R R Y    +       I G + G
Sbjct: 127 GLMMREALDAILARDKSAAKQAAKRRHHPLVAALPYRWRFYGSGLYISPLAPLILGFLVG 186

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
            L+  +GVGGG      ML+  G S      TS      +     +    +         
Sbjct: 187 ILTMLMGVGGGFMLVPAMLYILGMSGRVVVGTSLFNILFVTMATTMTHALTTKA------ 240

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                V++    ++L  S++     TK++       L +  + I+   +   
Sbjct: 241 -----VDLVLAGLLLIGSVMGAQFGTKVALKARPDILRLVLATIVILVALRM 287


>gi|330895416|gb|EGH27754.1| hypothetical protein PSYJA_01444 [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 261

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 99/273 (36%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +VA  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   FVVAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + HR++  I+ K+            ++T   +S +        + + +A     LL  +
Sbjct: 60  VLVHRKNDNIDWKVTGLLTLGSVPAVLMTLWFLSTLHTAPEALNAIIKQALGFVLLLTAL 119

Query: 140 LMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + +L                     +  I G++ G +     +G G      L +L
Sbjct: 120 AVLFKKKLLAFAHRRGDGYSFFSGTSLTVLTVITGLILGTMVALTSIGAGALGTVALFIL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T       +              + GL   S+G +N   +  +L  S+ 
Sbjct: 180 YPLLPTRRLVGTEIAHPVPLTL------------VAGLGHASMGNMNWELLGWLLMGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + ++  +    L    ++++ T  F  A
Sbjct: 228 GIYLGSHMAGRVSDDLLRPFLAIMLGTIGFKLA 260



 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 44/120 (36%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 148 VLTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHPVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G +N ++L   +        + S M   V    L    AI    +G  +  
Sbjct: 202 VAGLGHASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDDLLRPFLAIMLGTIGFKLAF 261



 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                 + G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 4   GGLGFVVAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 61


>gi|255322690|ref|ZP_05363834.1| inner membrane protein YfcA [Campylobacter showae RM3277]
 gi|255300251|gb|EET79524.1| inner membrane protein YfcA [Campylobacter showae RM3277]
          Length = 264

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 57/268 (21%), Positives = 104/268 (38%), Gaps = 25/268 (9%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  D  V    +   A+F +G +  + G GGGL+ +P +      MG+      HVA+ T
Sbjct: 10  MDFDFGVTAYLIFFAAAFAAGFVDAIAG-GGGLIALPTIM----AMGVPP----HVALAT 60

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  + +   R G IN + +   I    I   V +++I  +   FL       
Sbjct: 61  NKLQGTFGSFTAALNFARKGMINFREVFIGIVFTFIGACVGTVLILFLSAEFLRVIIPFC 120

Query: 134 CLLMGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-G 189
            + + I  L   ++  E    +        I+G++ GF  G  G G G F    M+   G
Sbjct: 121 LMAIFIYTLLMPKVGDEDRAARMNARAFYVIFGLILGFYDGFFGPGAGSFWTFAMVALIG 180

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
            ++ KA A +  ++      +L V I  G  L     W++G       L++    +L   
Sbjct: 181 LNMKKAVAHTKILNFTSNIVSLAVFIAGGQIL-----WAVG-------LLMGVGQVLGAY 228

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             + +      K++ + F  ++  T   
Sbjct: 229 FGSNMVIKKDVKFVRVVFLAVVGATILK 256


>gi|110636625|ref|YP_676832.1| ABC transporter permease [Cytophaga hutchinsonii ATCC 33406]
 gi|110279306|gb|ABG57492.1| ABC transporter, permease component [Cytophaga hutchinsonii ATCC
           33406]
          Length = 364

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 98/261 (37%), Gaps = 28/261 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            ++   L+  + G  G+  G      L     +  ++ S  +H+A          T+  S
Sbjct: 98  YLIVGLLAQMVDGALGMAYGATATSFLVSI-GVNTMNASASIHIAE-------VFTTGAS 149

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD----------KSFLNKAFAIFCL 135
            + H + G +N K+ K+ +    I  V+ +L++S +           K+++     ++ +
Sbjct: 150 GLSHLKFGNVNKKLFKNLLIPGIIGAVLGALILSLLQKGTIFSEDNVKNYIRPVTMVYTM 209

Query: 136 LMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           ++GI++L++  +  + K     V  +  +V GF+    G G G      ++  G +I   
Sbjct: 210 ILGIIVLRKALVKVQVKNKITKVTPLA-LVGGFMDSIGGGGWGPIVTSTLISSGRAINYT 268

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             +       +A  + L  I       GL            ++ ++   I   P A  L 
Sbjct: 269 IGSVNLAEFFVALSSSLTFIIFAGLDPGL---------WQVIIGLIIGGIFAAPFAALLV 319

Query: 256 YMIGKKYLTIGFSMIMFTTSF 276
             + KK L I     +   S 
Sbjct: 320 NKVKKKPLMIFVGCFIIFLSI 340


>gi|82544808|ref|YP_408755.1| hypothetical protein SBO_2364 [Shigella boydii Sb227]
 gi|81246219|gb|ABB66927.1| putative structural protein [Shigella boydii Sb227]
 gi|332093468|gb|EGI98526.1| hypothetical protein SB359474_2725 [Shigella boydii 3594-74]
          Length = 269

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 74/182 (40%), Gaps = 13/182 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLGVLFFVAMLAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +    ++  +L++ +V    L +   I  + +G+  
Sbjct: 65  SISATIYFIRRKVVSLSDQKLNIAMTFAGSMSGALLVQYVQADVLRQILPILVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G   G F  L  +   G ++ KATA
Sbjct: 125 LLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATA 184

Query: 198 TS 199
            +
Sbjct: 185 HA 186


>gi|37521834|ref|NP_925211.1| hypothetical protein gll2265 [Gloeobacter violaceus PCC 7421]
 gi|35212833|dbj|BAC90206.1| gll2265 [Gloeobacter violaceus PCC 7421]
          Length = 119

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 57/121 (47%), Gaps = 8/121 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV-IAPT 81
           I  ++    ++G L+G+FG+GGG +MVP +                +A GTSL   + P 
Sbjct: 3   IASLLSLGLVAGVLAGMFGIGGGAIMVPAMMFLIGF-------STKLATGTSLAALLLPF 55

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            +   +E+ ++G +N+      +  L + +   + +   +    + +AF +F +++ +  
Sbjct: 56  GLFGVLEYYKNGQVNIPAALLLVAGLFVGSYFGAKLTLGLPDIVVKRAFGVFLIVIALRY 115

Query: 142 L 142
           L
Sbjct: 116 L 116



 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 14/124 (11%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATS-AGVSALIAFPALLVR 214
                 G+V G L+G  G+GGG      M+F  G S   AT TS A +        +L  
Sbjct: 4   ASLLSLGLVAGVLAGMFGIGGGAIMVPAMMFLIGFSTKLATGTSLAALLLPFGLFGVLEY 63

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                       +  G VNI A L+++    + +    KL+  +    +   F + +   
Sbjct: 64  ------------YKNGQVNIPAALLLVAGLFVGSYFGAKLTLGLPDIVVKRAFGVFLIVI 111

Query: 275 SFVF 278
           +  +
Sbjct: 112 ALRY 115


>gi|320183784|gb|EFW58618.1| Putative membrane protein YfcA [Shigella flexneri CDC 796-83]
          Length = 269

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 74/182 (40%), Gaps = 13/182 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLGVLFFVAMLAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +    ++  +L++ +V    L +   I  + +G+  
Sbjct: 65  SISATIYFIRRKVVSLSDQKLNIAMTFAGSMSGALLVQYVQADVLRQILPILVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G   G F  L  +   G ++ KATA
Sbjct: 125 LLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATA 184

Query: 198 TS 199
            +
Sbjct: 185 HA 186


>gi|16272747|ref|NP_438966.1| hypothetical protein HI0806 [Haemophilus influenzae Rd KW20]
 gi|260579898|ref|ZP_05847728.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|1175309|sp|P44054|Y806_HAEIN RecName: Full=UPF0721 transmembrane protein HI_0806
 gi|1573818|gb|AAC22465.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|260093182|gb|EEW77115.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
          Length = 268

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 96/264 (36%), Gaps = 13/264 (4%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I ++++    +  +S +FG+GGG++MVP+L   F        + + V   TSL ++  
Sbjct: 4   STIFILLICGICTNMVSAIFGIGGGVLMVPILRTLF------PELPIQVISATSLTIVMC 57

Query: 81  TSVMS-FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           T++++    H++   I+   +  W   + I   +   +  +   + ++  F +    + I
Sbjct: 58  TALINLLFFHKQKIKIDYINMILWSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAI 117

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMV-----TGFLSGALGVGGGIFTNLLMLFYGASIYK 194
                        F  + ++   G +               GG I   L+    G    +
Sbjct: 118 KTFLNRSRIQIEVFNMSPIERAKGSISFCGGGLIAGITGIGGGSILAPLVGQLKGVKTQQ 177

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
               +  +  +     L   +   +  +      LG +N   V ++   S  ++  + KL
Sbjct: 178 IAVYTNYMMIIGGIGNLYGYLTRAFLYDASLSGQLG-LNFLVVGVVTLGSFEMSFFSMKL 236

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
             ++         ++I+F  +   
Sbjct: 237 RGLMNPVLTRKLLAIILFCIAAYM 260


>gi|119774385|ref|YP_927125.1| hypothetical protein Sama_1248 [Shewanella amazonensis SB2B]
 gi|119766885|gb|ABL99455.1| protein of unknown function DUF81 [Shewanella amazonensis SB2B]
          Length = 257

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 90/255 (35%), Gaps = 28/255 (10%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G +  + G GGGL+ +P L       G+      H A+GT+       S  +   + R
Sbjct: 19  IAGFIDAVVG-GGGLLSIPALL----SFGLPP----HQALGTNKLSACFGSATAAWTYYR 69

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR------D 145
              +     +       I  ++ ++ +   D   L K   +  + + +  L +       
Sbjct: 70  QQLLTPTFWRHSAAATFIGALLGTIAVYLTDAGILQKLLPLIIMAIALYTLIKPAAIEHP 129

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSA 204
           +    +       +++ G+  GF  G  G G G F  L     Y   + +  A +  ++ 
Sbjct: 130 KAQEPQAPASTKHQWMQGVPLGFYDGYAGPGIGAFWTLSSSRLYRLPVLQNCALARAMTL 189

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           +    AL V +  G             V+I   L +    +    L  + +   G  ++ 
Sbjct: 190 ISNITALSVFMIFGQ------------VDIAVGLFLGASMMAGAYLGARSAIHFGLPFIR 237

Query: 265 IGFSMIMFTTSFVFA 279
             F +I+F  S   A
Sbjct: 238 PVFILIVFAASTQLA 252


>gi|15924704|ref|NP_372238.1| hypothetical protein SAV1714 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927291|ref|NP_374824.1| hypothetical protein SA1536 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148268193|ref|YP_001247136.1| hypothetical protein SaurJH9_1770 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394261|ref|YP_001316936.1| hypothetical protein SaurJH1_1805 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156980031|ref|YP_001442290.1| hypothetical protein SAHV_1700 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|255006499|ref|ZP_05145100.2| hypothetical protein SauraM_08520 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257794098|ref|ZP_05643077.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|258415802|ref|ZP_05682073.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|258421961|ref|ZP_05684881.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|258438281|ref|ZP_05689565.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|258443739|ref|ZP_05692078.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|258445950|ref|ZP_05694126.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|258448370|ref|ZP_05696487.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|258454150|ref|ZP_05702121.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|269203352|ref|YP_003282621.1| hypothetical protein SAAV_1724 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282893208|ref|ZP_06301442.1| hypothetical protein SGAG_00562 [Staphylococcus aureus A8117]
 gi|282927843|ref|ZP_06335454.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|295406024|ref|ZP_06815832.1| hypothetical protein SMAG_01181 [Staphylococcus aureus A8819]
 gi|296276447|ref|ZP_06858954.1| hypothetical protein SauraMR_08859 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297245050|ref|ZP_06928927.1| hypothetical protein SLAG_01144 [Staphylococcus aureus A8796]
 gi|13701509|dbj|BAB42803.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247486|dbj|BAB57876.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|147741262|gb|ABQ49560.1| protein of unknown function DUF81 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149946713|gb|ABR52649.1| protein of unknown function DUF81 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156722166|dbj|BAF78583.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|257788070|gb|EEV26410.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|257839395|gb|EEV63868.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|257842005|gb|EEV66434.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|257848325|gb|EEV72316.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|257851145|gb|EEV75088.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|257855192|gb|EEV78131.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|257858338|gb|EEV81223.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|257863602|gb|EEV86359.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|262075642|gb|ACY11615.1| hypothetical protein SAAV_1724 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282590353|gb|EFB95432.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|282764526|gb|EFC04652.1| hypothetical protein SGAG_00562 [Staphylococcus aureus A8117]
 gi|285817396|gb|ADC37883.1| hypothetical protein SA2981_1672 [Staphylococcus aureus 04-02981]
 gi|294969021|gb|EFG45042.1| hypothetical protein SMAG_01181 [Staphylococcus aureus A8819]
 gi|297178130|gb|EFH37378.1| hypothetical protein SLAG_01144 [Staphylococcus aureus A8796]
 gi|312830092|emb|CBX34934.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315130650|gb|EFT86636.1| hypothetical protein CGSSa03_10415 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329727563|gb|EGG64019.1| putative membrane protein [Staphylococcus aureus subsp. aureus
           21172]
          Length = 256

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +II+  F++  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   LTMIIIIILFGFIAAFIDSVVG-GGGLISTPALLAI--------GLPPSVALGTNKLASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+ S ++  R G +++ ++      + + +   + + + V    L     I    + I
Sbjct: 56  FGSLTSMIKFIRSGKVDLFVVAKLFGFVFLASACGAYIATMVPSQILKPLIIIALSSVFI 115

Query: 140 LMLKRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             L +      R      F    +     ++ GF  G +G G G F   ++L +G     
Sbjct: 116 FTLLKKDWGNTRTFTQFTFKKAIIFAALFILIGFYDGFVGGGTGSFMLFVLLVFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A   +  ++      AL++ +  G
Sbjct: 176 AAGNAKVLNFASNIGALVLFMVLG 199


>gi|300857365|ref|YP_003782349.1| putative permease [Clostridium ljungdahlii DSM 13528]
 gi|300437480|gb|ADK17247.1| putative permease [Clostridium ljungdahlii DSM 13528]
          Length = 251

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 90/229 (39%), Gaps = 22/229 (9%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           AF LMGI      H+A+GT+      +++ S ++  +   ++ KILK  +    I   + 
Sbjct: 32  AFLLMGIPP----HLALGTNKFTSCCSTLSSPIKFTQSKKVDFKILKYLLPFSFIGATLG 87

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT-----GFL 169
           + ++  +   +LN    I  L +G+  L    +  E KF     K I   +      GF 
Sbjct: 88  ANVVLSIKSHYLNVIVLILLLFVGLYSLFSKNIGLEDKFKHISPKNICLGIILALSLGFY 147

Query: 170 SGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
            G LG G G F    L+  Y     +A+     ++ +    ++LV    G          
Sbjct: 148 DGFLGAGVGTFLIFGLVSIYKFDFVRASGNCKIMNFIGNVASVLVFAIRGE--------- 198

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              +N    + I    I+   L T+++ M G K +   F  +  T +  
Sbjct: 199 ---INYKIGIPIALCMIIGANLGTRIALMKGSKLIKPIFITMSLTVAVK 244


>gi|218885807|ref|YP_002435128.1| hypothetical protein DvMF_0703 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756761|gb|ACL07660.1| protein of unknown function DUF81 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 312

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 8/129 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +    L G L+ + GVGGG +MVPV+    +       + MHV +GTSL  I  T 
Sbjct: 182 LLMPLGLGALVGVLAAIMGVGGGFIMVPVMVYLLR-------MPMHVVVGTSLFQILFTC 234

Query: 83  V-MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           V ++ M+   + T++  +    +    +   V + +   +    L    A   L +   M
Sbjct: 235 VNVTVMQSVENHTVDFILALLLLIGSSVGAQVGTRIGKKLQGDQLKILLATLVLAVMGKM 294

Query: 142 LKRDRLYCE 150
           L       +
Sbjct: 295 LFDLLARPD 303



 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 85/276 (30%), Gaps = 59/276 (21%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           +FGVGGG +M P+L       GI  +    VA  +    I   S    + H R G ++ K
Sbjct: 34  IFGVGGGFLMTPLLIML----GIPPT----VAAASDSNQIVGASTSGTLAHFRLGNVDFK 85

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFCLLMGILMLKR--------- 144
           +    +        V   +I  +         +N  + +   L+G  M            
Sbjct: 86  MGLLLLVGGVAGGSVGVRIIKLLRAMGNADFLINVTYVLMLGLVGGYMFFESLQALRAPR 145

Query: 145 ----DRLYCE---------RKFP------------DNYVKYIWGMVTGFLSGALGVGGGI 179
                +             R  P               +    G + G L+  +GVGGG 
Sbjct: 146 AGAASKPAPTGESLYERCIRSMPWQTDFPRSGVRLSLLMPLGLGALVGVLAAIMGVGGGF 205

Query: 180 FTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
               +M++     ++    TS            +++                 V+    L
Sbjct: 206 IMVPVMVYLLRMPMHVVVGTSLFQILFTCVNVTVMQSVENHT-----------VDFILAL 254

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           ++L  S +   + T++   +    L I  + ++   
Sbjct: 255 LLLIGSSVGAQVGTRIGKKLQGDQLKILLATLVLAV 290


>gi|165976306|ref|YP_001651899.1| permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|165876407|gb|ABY69455.1| predicted permease [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
          Length = 258

 Score = 58.9 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 80/206 (38%), Gaps = 13/206 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +   D + ++   + ++G +  + G GGGL+ +P L            I   +A+GT+  
Sbjct: 2   ELSFDVLAMLFTIATVAGFIDAIAG-GGGLLTIPALL--------SAGIPPTMALGTNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                S  + +   R   +N++ +   I +  I     ++ +  +D + L        L+
Sbjct: 53  QACGGSFSASLYFVRQKAVNLRQISLLILLTFIGAACGTIFVQMIDVNSLKMLLPFLVLI 112

Query: 137 MGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           + I  L    +  E   ++       +      GF  G  G   G F  L  +L  G ++
Sbjct: 113 ISIYFLFSPTVGNEDRKQRISFPLFAFSAAAGIGFYDGMFGPATGSFFTLAFILLLGFNL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSG 218
            KA A +  ++    F +L+  +  G
Sbjct: 173 PKAVAHAKVLNFTSNFASLIFFMLGG 198


>gi|224827178|ref|ZP_03700273.1| protein of unknown function DUF81 [Lutiella nitroferrum 2002]
 gi|224600571|gb|EEG06759.1| protein of unknown function DUF81 [Lutiella nitroferrum 2002]
          Length = 251

 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 88/263 (33%), Gaps = 25/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + + +F +G +    G GGGL+ +P L                  +GT+       +
Sbjct: 3   MVFLCLMAFFAGMIDSAVG-GGGLIQLPALFNGLPTQ------APATLLGTNKFASVFGT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +     +   +   ++        + +   +   SHV K  +     +  + M +  L
Sbjct: 56  ASATRSFVKRVRMAWGLILPATGAAFLLSFAGATAASHVPKQVMKPVVLVLLIAMALYTL 115

Query: 143 KRD-----RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKAT 196
           K+               +  +  + G   GF  G  G G G F   L +         A+
Sbjct: 116 KKKDLGRVHKPTAVTAREKRLALLIGGGIGFYDGIFGPGTGTFLIFLFVRCFAFDFLHAS 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  V+      AL   + +G          L  V+I     +   +I+   + ++++ 
Sbjct: 176 AAAKVVNLATNIAALSFFVTTG--------NILYAVSIP----MALSNIVGAQVGSRIAI 223

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G   + + F +++      FA
Sbjct: 224 KGGAGLVRVLFLILVTGLIGKFA 246


>gi|212704568|ref|ZP_03312696.1| hypothetical protein DESPIG_02628 [Desulfovibrio piger ATCC 29098]
 gi|212671967|gb|EEB32450.1| hypothetical protein DESPIG_02628 [Desulfovibrio piger ATCC 29098]
          Length = 259

 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 104/262 (39%), Gaps = 22/262 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I     A+F++G +  + G GGGL+ +P L            +   +A+GT+       
Sbjct: 6   IILFCTCAAFVAGFIDSIAG-GGGLITIPALLL--------SGLPPQLALGTNKVGCCLG 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + ++ +   R   I  ++    +    +   + + +  ++    L K   +      +  
Sbjct: 57  TGVAMLNFARSNLILWRLALLGVGFSLVGAGIGTELALYISPDLLGKVLVLLLPFAMLAT 116

Query: 142 LKRDRLYCERKFPDNYVKYIWG----MVTGFLSGALGVGGGIFTNLLMLF-YGASIYKAT 196
           L   +   +         +I      ++ G   G  G G G F  L + +    S+ +A+
Sbjct: 117 LMPKKEQKKPPLTSGRRYWILAPLCFLIVGIYDGFFGPGTGSFLILALHWVLRISLIEAS 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           ATS  ++      A+++ I++G        WS+G   +  +   +  + L + LA K+  
Sbjct: 177 ATSKVMNFASNLGAMILFIWNG-----AVIWSVG---LPMMAANIAGNWLGSRLAIKVGT 228

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
              +++L +  S+++ T  + F
Sbjct: 229 EAVRRFLWVSLSLLLATLIWRF 250


>gi|170767201|ref|ZP_02901654.1| putative membrane protein [Escherichia albertii TW07627]
 gi|170123535|gb|EDS92466.1| putative membrane protein [Escherichia albertii TW07627]
          Length = 269

 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 76/180 (42%), Gaps = 13/180 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++ + + L+G +  + G GGGL+ +P L       G+  +     A+ T+       
Sbjct: 14  LLGVLFLVAILAGFIDSIAG-GGGLLTIPALM----AAGMPPAN----ALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +  + ++  +L++ +V    L +   +  + +G+  
Sbjct: 65  SISATIYFIRCKVVSLSDQKLNIAMTFVGSMSGALLVQYVKADVLRQILPLLVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G   G F  L  +   G ++ KATA
Sbjct: 125 LLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATA 184


>gi|15965701|ref|NP_386054.1| hypothetical protein SMc04286 [Sinorhizobium meliloti 1021]
 gi|307308631|ref|ZP_07588330.1| protein of unknown function DUF81 [Sinorhizobium meliloti BL225C]
 gi|307318765|ref|ZP_07598197.1| protein of unknown function DUF81 [Sinorhizobium meliloti AK83]
 gi|15074970|emb|CAC46527.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
 gi|306895486|gb|EFN26240.1| protein of unknown function DUF81 [Sinorhizobium meliloti AK83]
 gi|306900836|gb|EFN31446.1| protein of unknown function DUF81 [Sinorhizobium meliloti BL225C]
          Length = 319

 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 80/239 (33%), Gaps = 24/239 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGG++ +P +  A    GI         +GT+       S  + + + RHG +N++    
Sbjct: 86  GGGMITIPAMLIA----GIPPLET----LGTNKLQSLFGSGSASIAYARHGHVNLREQLP 137

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL---YCERKFPDNYVK 159
              +     V+ +L+ + V    L        + + +    +  +      R+       
Sbjct: 138 MALMSAAGAVLGALLATVVPADVLEAVLPFLLIGIALYFGFKPNIGDLDKHRRLSVFLFT 197

Query: 160 YIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             +  + G   G  G G G F  L  +   G  I KATA +  ++      A  V + SG
Sbjct: 198 ITFVPLIGLYDGVFGPGTGSFFMLGFVSLAGYGILKATAHTKFLNFGSNIGAFFVFLLSG 257

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                        V     L +     L   + ++ +   G K +     ++    +  
Sbjct: 258 V------------VLWKIGLTMGVGQFLGAQVGSRYAMAKGAKIIKPLLVVVSIALAIR 304


>gi|297184059|gb|ADI20179.1| predicted permeases [uncultured alpha proteobacterium EB080_L06A09]
          Length = 251

 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 75/217 (34%), Gaps = 24/217 (11%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +PV+  A         +   VA+GT+       +  + +     G +N K L  
Sbjct: 28  GGGLLTIPVMLIA--------GVPPLVALGTNKLQGLFGTASATITFAMRGHLNFKALWP 79

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR---LYCERKFPDNYVK 159
              +    +++ +L+ SH+ +  L        +L+               +   P   + 
Sbjct: 80  TALLCFFASIIGALIASHIPEKKLAVFLPYVLILIAFYFGLSKNMNSPNEKPILPFFVLA 139

Query: 160 YIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            I   + G   G  G G G F     +   G  I +ATA +  ++        +      
Sbjct: 140 CIILPIIGLYDGVFGPGAGSFYMLAFISIGGLGIIQATAQTKLMNFSSNIGGFIYFSI-- 197

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
                     +G VN    L +    IL + +  +L+
Sbjct: 198 ----------IGAVNWEIGLTMGCGQILGSTIGARLA 224


>gi|307720419|ref|YP_003891559.1| hypothetical protein Saut_0498 [Sulfurimonas autotrophica DSM
           16294]
 gi|306978512|gb|ADN08547.1| protein of unknown function DUF81 [Sulfurimonas autotrophica DSM
           16294]
          Length = 246

 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 81/196 (41%), Gaps = 9/196 (4%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++Y  +    +    TL  + GVG  + +VP     F +MG+  ++   + +  +     
Sbjct: 1   MEYYVIYFFLTLALSTLFSMGGVGSAIGLVP----IFSMMGMPLNLAKAIGLFINSASTI 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+M+F      G +++      I  + I T V + M  +V K  +      F ++  +
Sbjct: 57  TASIMNFF----RGVLDVGFAIPLIVSIMIATPVGAWMSQYVQKEIVEWVLVAFLVVSAL 112

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
           L++  +R   +  +   ++ Y+ G   G +SG +GVGGG     L++  G    KA    
Sbjct: 113 LLIFSNR-EQKVVYDKAWILYVIGGTVGLISGTIGVGGGSLIMPLLILLGFDAKKAAYAI 171

Query: 200 AGVSALIAFPALLVRI 215
           + V       A    +
Sbjct: 172 SFVIPFSTLGAFATYL 187


>gi|284053132|ref|ZP_06383342.1| hypothetical protein AplaP_16835 [Arthrospira platensis str.
           Paraca]
 gi|291567980|dbj|BAI90252.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 254

 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 82/237 (34%), Gaps = 29/237 (12%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL            I    A+  SL ++   S++  + H R G +N K    +     
Sbjct: 30  VPVLVYIM-------GIGTREAIAMSLAIVGSVSLLGMLPHWRRGNVNFKTFAIFTPTAM 82

Query: 109 ITTVVTSLMISH--VDKSFLNKAFAIFCLLMGILMLKRDR-------LYCERKFPDNYVK 159
           I     + + S   +  +     F    LL  ILM+ R             +     ++ 
Sbjct: 83  IGAYFGARLASFPGITDTIQMMTFGAIALLASILMISRSNHVPKAVDPSVAKDNSRWWLI 142

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
            + G+  G ++G +GVGGG     +++   G  I +A  TS  +    +   ++  +   
Sbjct: 143 PLGGLGVGVITGFVGVGGGFAIVPVLVLLGGIPIKEAIGTSLLIITFNSIAGIIGYL--- 199

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                +P      +N      +   + L T     L+  I  K L   F   +   +
Sbjct: 200 ---GQVP------INWSLTFSMTIAASLGTLGGAYLNQFIDGKRLQKFFGFFVLGIA 247



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 7/99 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
             +VPVL            I +  A+GTSL +I   S+   + +     IN  +      
Sbjct: 162 FAIVPVLVLL-------GGIPIKEAIGTSLLIITFNSIAGIIGYLGQVPINWSLTFSMTI 214

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              + T+  + +   +D   L K F  F L +  ++L +
Sbjct: 215 AASLGTLGGAYLNQFIDGKRLQKFFGFFVLGIATVVLLQ 253


>gi|24113699|ref|NP_708209.1| hypothetical protein SF2403 [Shigella flexneri 2a str. 301]
 gi|30063753|ref|NP_837924.1| hypothetical protein S2538 [Shigella flexneri 2a str. 2457T]
 gi|24052768|gb|AAN43916.1| putative structural protein [Shigella flexneri 2a str. 301]
 gi|30042008|gb|AAP17734.1| putative structural protein [Shigella flexneri 2a str. 2457T]
 gi|281601768|gb|ADA74752.1| putative structural protein [Shigella flexneri 2002017]
 gi|313651152|gb|EFS15551.1| hypothetical protein SF2457T_0413 [Shigella flexneri 2a str. 2457T]
 gi|332754977|gb|EGJ85342.1| hypothetical protein SF434370_2504 [Shigella flexneri 4343-70]
 gi|332755377|gb|EGJ85741.1| hypothetical protein SFK671_2918 [Shigella flexneri K-671]
 gi|332756301|gb|EGJ86652.1| hypothetical protein SF274771_2845 [Shigella flexneri 2747-71]
 gi|333001472|gb|EGK21040.1| hypothetical protein SFVA6_3191 [Shigella flexneri VA-6]
 gi|333001709|gb|EGK21275.1| hypothetical protein SFK218_3319 [Shigella flexneri K-218]
 gi|333016353|gb|EGK35684.1| hypothetical protein SFK304_3137 [Shigella flexneri K-304]
          Length = 269

 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 75/180 (41%), Gaps = 13/180 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLGVLFFVAMLAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +  + ++  +L++ +V    L +   I  + +G+  
Sbjct: 65  SISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYF 124

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G   G F  L  ++  G ++ KATA
Sbjct: 125 LLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVMLCGFNLAKATA 184


>gi|146283016|ref|YP_001173169.1| hypothetical protein PST_2677 [Pseudomonas stutzeri A1501]
 gi|145571221|gb|ABP80327.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
          Length = 290

 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 2/148 (1%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+G SLG +A ++++  +   R G +  + +                +   + +  L   
Sbjct: 83  AIGVSLGAVAMSALIGAIPRARLGQVAWRPVVLLALCGLPGNAAGQWLGQFIPERALIIG 142

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDN-YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F +  L     M +   L  +    D        G+  G LSG +GVGGG      +L++
Sbjct: 143 FCLLVLWSAWRMWRGASLPAKENAEDRYPALLGIGLGVGLLSGLMGVGGGFLIVPALLWF 202

Query: 189 -GASIYKATATSAGVSALIAFPALLVRI 215
              S+  A ATS  V A+++    L+ +
Sbjct: 203 TSLSLLSAMATSMAVIAVVSGGGFLLYL 230


>gi|321314982|ref|YP_004207269.1| putative integral inner membrane protein [Bacillus subtilis BSn5]
 gi|291483754|dbj|BAI84829.1| hypothetical protein BSNT_02100 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320021256|gb|ADV96242.1| putative integral inner membrane protein [Bacillus subtilis BSn5]
          Length = 254

 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 95/268 (35%), Gaps = 36/268 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II+     G L GL GVGG  ++ P+L       GI+ S    +A+GT L   + T +  
Sbjct: 5   IILMGLFVGALVGLTGVGGAALLTPLLIVL----GINPS----IAVGTDLVYNSITKLFG 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
              H R  TIN K++K        +  +   ++             +  A      L+ I
Sbjct: 57  VASHWRQKTINFKLVKYLAIGSIPSASLAIGILHLFPAFHQHQEEIIKHALGYVLTLVAI 116

Query: 140 LM---------LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YG 189
            +         L+ +R           +  + G+V GF+ G   +G G    + M++ + 
Sbjct: 117 SIIVRLFLDRKLRPNRWQLMPLENKRALTILIGVVFGFIVGLTSIGSGSLFAIAMIYLFN 176

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
               +   T    + L+   A ++              S G V+      +L  SI    
Sbjct: 177 MKASQIVGTDIAHAFLLVTAAGILNA------------SFGSVDYMLAANLLIGSIPGVL 224

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + + LS     + L    + I+  +   
Sbjct: 225 IGSHLSPRFSPRPLQFIMASIILVSGLK 252


>gi|283956845|ref|ZP_06374318.1| hypothetical protein C1336_000320007 [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283791571|gb|EFC30367.1| hypothetical protein C1336_000320007 [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 254

 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 92/263 (34%), Gaps = 28/263 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y  ++   +  +G +  + G GGGL+ +P L            I  H+++ T+       
Sbjct: 10  YYFILFFVALFAGFIDSIVG-GGGLITLPALIAC--------GIPAHLSLATNKLQSVFG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + + + +  T  +  L   +F   +   + S  +  V    L     IF  L  +  
Sbjct: 61  SFTATLTYFKSTT--LPHLAWGVFFTALGAAIGSYSVLFVKDEQLKLIILIFLTLTFLYT 118

Query: 142 LKRDRLYCERKFPD----NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
             R  L      P          I G+  GF  G LG G G F     +   G ++ KA 
Sbjct: 119 ALRPNLGKHESEPKIKNIKIFHLICGLTLGFYDGFLGPGTGSFWIFACVMLLGFNMRKA- 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S     L     ++      W    L  W++G       L++    +L   L +KL  
Sbjct: 178 --SINTKILNFTSNIIALAIFLWQYELL--WAIG-------LLMGVGQVLGAYLGSKLVL 226

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
               K++   F +++  T    A
Sbjct: 227 KTNGKFIKTLFLIVVGATIIKVA 249


>gi|229042788|ref|ZP_04190526.1| integral membrane protein [Bacillus cereus AH676]
 gi|228726565|gb|EEL77784.1| integral membrane protein [Bacillus cereus AH676]
          Length = 255

 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 75/203 (36%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++I   FL+  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIAFGFLAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +++K     + +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GSATSNIVFYRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNSEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 179 AGNAKLLNLGSNVGALLMFMYIG 201



 Score = 35.4 bits (81), Expect = 9.4,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +   +G +  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIAFGFLAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   ++P++ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNSEVLKPLMLIMLGAVAIY 118


>gi|307256938|ref|ZP_07538716.1| Permease with 5 transmembrane domains [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306864672|gb|EFM96577.1| Permease with 5 transmembrane domains [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 258

 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 81/206 (39%), Gaps = 13/206 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +   D + ++   + ++G +  + G GGGL+ +P L            I   +A+GT+  
Sbjct: 2   ELSFDVLAMLFTIATIAGFIDAIAG-GGGLLTIPALL--------SAGILPTMALGTNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                S  + +   R   +N++ +   I +  I     ++ +  +D + L        L+
Sbjct: 53  QACGGSFSASLYFVRQKAVNLRQISLLILLTFIGAACGTIFVQMIDVNSLKMLLPFLVLI 112

Query: 137 MGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           +GI  L    +  E   ++       +      GF  G  G   G F  L  +L  G ++
Sbjct: 113 IGIYFLFSPTVGNEDRKQRISFPLFAFSAAAGIGFYDGMFGPATGSFFTLAFILLLGFNL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSG 218
            KA A +  ++    F +L+  +  G
Sbjct: 173 PKAVAHAKVLNFTSNFASLIFFMLGG 198


>gi|164687572|ref|ZP_02211600.1| hypothetical protein CLOBAR_01213 [Clostridium bartlettii DSM
           16795]
 gi|164603346|gb|EDQ96811.1| hypothetical protein CLOBAR_01213 [Clostridium bartlettii DSM
           16795]
          Length = 120

 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 7/116 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +    +G ++GLFG GGG ++VP+L+   +       +  H +  T+L +I   +V S +
Sbjct: 11  IIGAFTGFVNGLFGSGGGTLLVPILNNILK-------VEEHKSHATALAIIIFLTVTSSV 63

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   GT ++K+         I  ++ + ++S V   FL  +F I  ++  I M+ 
Sbjct: 64  IYVSRGTYDIKLTIQAAIGSIIGGIIGAKLLSKVTGKFLRISFGIVMIISAIRMIF 119



 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 13/128 (10%)

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPA 210
           K P N    I G  TGF++G  G GGG     ++        +K+ AT+  +   +   +
Sbjct: 2   KNPFNIKNSIIGAFTGFVNGLFGSGGGTLLVPILNNILKVEEHKSHATALAIIIFLTVTS 61

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            ++ +  G     L             +     SI+   +  KL   +  K+L I F ++
Sbjct: 62  SVIYVSRGTYDIKL------------TIQAAIGSIIGGIIGAKLLSKVTGKFLRISFGIV 109

Query: 271 MFTTSFVF 278
           M  ++   
Sbjct: 110 MIISAIRM 117


>gi|85707653|ref|ZP_01038719.1| membrane protein [Erythrobacter sp. NAP1]
 gi|85689187|gb|EAQ29190.1| membrane protein [Erythrobacter sp. NAP1]
          Length = 304

 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   L G L+ L GVGGG ++VP +     + G       +V +GTSL  I   ++++ 
Sbjct: 179 LILGVLVGILTMLMGVGGGFILVPAMLYILGMSG-------NVVVGTSLFQILFVTMVTT 231

Query: 87  MEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H      +++ +    +    +     + +        L    A   + + + ML   
Sbjct: 232 MTHALTTQAVDIVLAGLLLLGSVMGAQFGTQIAMKARPEILRIVLAAIVIAVALRMLYGL 291

Query: 146 RLYCER 151
            +  + 
Sbjct: 292 GVQPDE 297



 Score = 38.5 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 100/292 (34%), Gaps = 56/292 (19%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I+    L+G LSGLFGVGGG +  P+L       GI  +    VA  ++   +   SV
Sbjct: 15  LFIVFLGGLTGILSGLFGVGGGFLTTPLLIF----YGIPPT----VAAASAATQVTGASV 66

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMG 138
              + H +   ++ ++    +    +  ++ +++ S +         +   + +    +G
Sbjct: 67  SGVIAHGKRKGVDYRMGLVMVGGGVVGALLGAVLFSLLQAWGQIDVVIGVLYVLLLGTIG 126

Query: 139 ILMLK-------------RDRLYCERKFP------------------DNYVKYIWGMVTG 167
            LM++               +    R  P                        I G++ G
Sbjct: 127 SLMMRESIDSLRGKAEGASAQPRKRRHHPLVAGLPFRARFYASGLYISPLAPLILGVLVG 186

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
            L+  +GVGGG      ML+  G S      TS      +     +    +         
Sbjct: 187 ILTMLMGVGGGFILVPAMLYILGMSGNVVVGTSLFQILFVTMVTTMTHALTTQA------ 240

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                V+I    ++L  S++     T+++     + L I  + I+   +   
Sbjct: 241 -----VDIVLAGLLLLGSVMGAQFGTQIAMKARPEILRIVLAAIVIAVALRM 287


>gi|319948208|ref|ZP_08022367.1| hypothetical protein ES5_02639 [Dietzia cinnamea P4]
 gi|319438143|gb|EFV93104.1| hypothetical protein ES5_02639 [Dietzia cinnamea P4]
          Length = 311

 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 85/264 (32%), Gaps = 23/264 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V   ++  + G  G+  G+    +L  A        +      +GT+L    
Sbjct: 1   MKTLIVLGVVGAIAQLIDGSLGMAYGVTSTTLLVAAGIAPAAASASVHFAEIGTTLA--- 57

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                S   H + G ++ +I++       I     + ++S +          +  L +G+
Sbjct: 58  -----SGFSHHKLGNVDWRIVRILAVPGAIGAFAGATLLSSLPADVAKPVVGVILLALGL 112

Query: 140 LMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIY 193
            +L R      R+               G+V G L    G G G      +L  G     
Sbjct: 113 YVLYRFLALGGRRPEFTGRVRTAFLVPLGLVGGTLDSLGGGGWGPVGTTSLLSSGRVEPR 172

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           K   +      ++A    L  +                ++ G  L +L   +++ P A  
Sbjct: 173 KVVGSIDTSEFVVAVGGSLGFLLGLGAAG---------IDWGYALALLIGGVVVAPFAAW 223

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           L   +  + L      ++  T+  
Sbjct: 224 LVKHLPARVLGTAAGGLIVVTNAR 247


>gi|126734854|ref|ZP_01750600.1| integral membrane protein, putative [Roseobacter sp. CCS2]
 gi|126715409|gb|EBA12274.1| integral membrane protein, putative [Roseobacter sp. CCS2]
          Length = 306

 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 99/279 (35%), Gaps = 55/279 (19%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SG+FGVGGG +M P+L       GI  +    VA+ T    I  +S    + H +  T++
Sbjct: 28  SGMFGVGGGFLMTPLLFFI----GIPPA----VAVATEANQIVASSFSGVLAHLKRKTVD 79

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGILML--------- 142
           +++    +    I + +  ++ +++         +   + +F  ++G LM          
Sbjct: 80  LRMGTVLLIGGLIGSGLGIILFNYLKALGQVELLVQLCYVVFLGMIGSLMFIESLNAIRK 139

Query: 143 ---------KRDRLYCERKFPDNYVKYIWGMVTGFL------------SGALGVGGGIFT 181
                    KR +       P      + G+    +            +  +GVGGG   
Sbjct: 140 SSKPGGAVPKRRKHNWVHNLPFKMKFRVSGLYISVIPPLLVGVLVGVLAAIMGVGGGFIM 199

Query: 182 NLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
              M++  G        TS      +     ++   + + ++ +             +++
Sbjct: 200 VPAMIYLLGMPTKVVVGTSLFQIIFVTAFTTMLHATTNFTVDVV-----------LAVLL 248

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           L   ++   + T++   +  + L I  ++++       A
Sbjct: 249 LVGGVIGAQIGTRIGVKMKAEQLRIWLAIMVLAVCGKLA 287


>gi|94972146|ref|YP_594186.1| hypothetical protein Dgeo_2679 [Deinococcus geothermalis DSM 11300]
 gi|94554197|gb|ABF44112.1| protein of unknown function DUF81 [Deinococcus geothermalis DSM
           11300]
          Length = 267

 Score = 58.9 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 75/228 (32%), Gaps = 18/228 (7%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL                +A+  SL ++   ++   + + R G +  + +  +     
Sbjct: 27  VPVLVYL-------AGEDPKLAVAESLAIVGVIALFGALPYARRGCVQWRSVGLFGTPGV 79

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR-DRLYCERKFPDNYVKYIWGMVTG 167
           + TV+ SL+   +  +     FA   L   + M +           P   V      V  
Sbjct: 80  VGTVLGSLLSHRLPAALQLLIFAAVMLTAAVRMFRPMATPDAGCARPSWQVILTGLGVGV 139

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
                   GG +    L+L  G  + +A  TS     +IA  +             LP +
Sbjct: 140 LTGVVGVGGGFLILPALVLLLGLPMPQAVGTSL---VIIALNSAFGF------AAHLPQF 190

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
               ++ G + ++  I +L + L   LS       L   F+  +    
Sbjct: 191 GS-HLHWGIIALLGSIGVLGSFLGESLSKFCSPLTLRRAFAAFLVVLG 237


>gi|303246503|ref|ZP_07332782.1| protein of unknown function DUF81 [Desulfovibrio fructosovorans JJ]
 gi|302492213|gb|EFL52088.1| protein of unknown function DUF81 [Desulfovibrio fructosovorans JJ]
          Length = 420

 Score = 58.9 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 102/293 (34%), Gaps = 69/293 (23%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I     +G ++G  G GGG ++ P L        +   +   +A+GT L  I   ++M  
Sbjct: 78  IAVGLAAGLITGCIGAGGGFIITPAL--------MSVGVKGILAVGTDLFHIFAKAIMGT 129

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISH-------VDKSFLNKAFAIFCLLMGI 139
             H++ G +++K+   ++      T V   +          +  +F++  + +    +GI
Sbjct: 130 TVHKKLGNVSVKLAIAFLVGSISGTFVGGAINKWFYNKDPLLSDTFISIIYVLILGFLGI 189

Query: 140 L------------------------------------------MLKRDRLYCERKFPDNY 157
                                                      +   +      K    +
Sbjct: 190 YAMTDFIRASRKTSAATSTDSHGGATGVTSIGAKLQNLNIAPMIPFDEDFVPGGKRISGW 249

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +    G++ G LS  +G+GGG  T  + ++             GVS++      + +I  
Sbjct: 250 IVASGGLLVGILSALMGMGGGFVTFPMFVYV-----------FGVSSMTTVGTDIFQIIF 298

Query: 218 GWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             G+  +  +++ G+V     + +L  S+L   +    + ++    +   +++
Sbjct: 299 TAGVGSIAQYAIYGYVFYSLAVGMLLGSLLGIQVGALTTKVVKGIQIRGFYAI 351



 Score = 45.1 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 8/118 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++     L G LS L G+GGG V  P+    F        +     +GT +  I  T+ 
Sbjct: 249 WIVASGGLLVGILSALMGMGGGFVTFPMFVYVF-------GVSSMTTVGTDIFQIIFTAG 301

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +  +     +G +   +    +    +   V +L    V    +   +AI  L   I 
Sbjct: 302 VGSIAQYAIYGYVFYSLAVGMLLGSLLGIQVGALTTKVVKGIQIRGFYAITILAGFIN 359


>gi|228965456|ref|ZP_04126543.1| hypothetical protein bthur0004_22870 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228794287|gb|EEM41804.1| hypothetical protein bthur0004_22870 [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 252

 Score = 58.9 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 106/265 (40%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  ++ + L+ + + L+G +  + G GGG++ +P++            +   VA+ T+  
Sbjct: 2   DFTIELLILLFLVAVLAGWIDTIAG-GGGMITIPIMLLV--------GMSPSVAIATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  ++M+ +   +   IN+K ++  I +    +V+   ++  +   +L        ++
Sbjct: 53  QGSSGTLMATVFFIKKKEINLKEMRLSILMTFFGSVLGGWLVLQIRAEYLIMILPFLLII 112

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIW---GMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           +G+  L    +  E +     +           GF  G  G G G    L  +L  G S 
Sbjct: 113 IGLYFLLSPNIANEDQPRKISMLLFALTVAPFLGFYDGFFGPGTGSLIALAFILLCGYSA 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++    F ALL  I  G        W++G       LI++   I+ + +  
Sbjct: 173 TRATANAKILNFTSNFAALLYFIIFGQ-----IDWTIG-------LIMMLGQIIGSYIGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           K+    G   +     ++ F  +  
Sbjct: 221 KMVLTKGTSLIRPIVVIVCFVMAIK 245


>gi|296140723|ref|YP_003647966.1| hypothetical protein Tpau_3033 [Tsukamurella paurometabola DSM
           20162]
 gi|296028857|gb|ADG79627.1| protein of unknown function DUF81 [Tsukamurella paurometabola DSM
           20162]
          Length = 319

 Score = 58.9 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 87/264 (32%), Gaps = 22/264 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++     L   + G  G+  G+     L     L     S  +H+A         
Sbjct: 1   MPTLLIVAFVGLLGQLVDGSLGMAFGVTATTFLVALTTLSPAAISATIHLAE-------I 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS +S   H R G ++ K+++       I   V + ++S++         ++  LL+G+
Sbjct: 54  GTSAVSGASHWRFGNVDWKVVRRIGIPGAIGAFVGATVLSNLSTEVAKPLMSVILLLLGL 113

Query: 140 -----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIY 193
                   +        +   +      G+  GF+    G G G      +L  G     
Sbjct: 114 YVLLRFTFRGIDTKNLGRPLKSRFLAPLGLFGGFVDATGGGGWGPVGTPALLASGRMEPR 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           K   T      LIA  A L  + +  G  G        VN      IL   ++  P+A  
Sbjct: 174 KVVGTIDTSEFLIALAASLGFLAN-LGSEG--------VNFAYAGAILAGGVIAAPIAAW 224

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           L      + L      ++  T+  
Sbjct: 225 LVRHFPPRLLGASVGGLIILTNAR 248


>gi|227522939|ref|ZP_03952988.1| possible permease [Lactobacillus hilgardii ATCC 8290]
 gi|227089968|gb|EEI25280.1| possible permease [Lactobacillus hilgardii ATCC 8290]
          Length = 244

 Score = 58.9 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A  TSL    P  V+    H R G +        +      TV+ SL+   +  +    A
Sbjct: 42  AAATSLFTALPALVVGTYSHYRTGNMKFSYGNKLLITALPATVIGSLVSGVIPVTLYTWA 101

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            AI   ++G+  L++            +  Y++G ++G + G  G+ GG      +L  G
Sbjct: 102 IAIILFVLGVQTLRKSFKGKPSSNLKPWTVYLFGALSGLMVGIAGLSGGGPVMAGLLLLG 161

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
            ++ +A ATS+     ++   L+     G
Sbjct: 162 LNMPQAAATSSYTLIALSIIGLIFHSTQG 190


>gi|220912190|ref|YP_002487499.1| hypothetical protein Achl_1420 [Arthrobacter chlorophenolicus A6]
 gi|219859068|gb|ACL39410.1| protein of unknown function DUF81 [Arthrobacter chlorophenolicus
           A6]
          Length = 264

 Score = 58.9 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 78/214 (36%), Gaps = 14/214 (6%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M F  +   +  + LI++A F +G +  + G GGGL+ +P L            I    A
Sbjct: 1   MDFGVEHLQLTTLILIVLAGFGAGWVDAVVG-GGGLIQLPALLLV-------PGITPVQA 52

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           + T+       +  S + + R    ++K       +    +   +++ +++  S      
Sbjct: 53  LATNKLGSIFGTTTSAVTYYRRVGPDLKTALPMAVIALAGSFGGAILAANLPASVFKPII 112

Query: 131 AIFCLLMGILMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLL 184
               + + +    +  +               V  + G V GF  G +G G G      L
Sbjct: 113 VAALVAVALFTALKPNVGDITALRHDGHKHYVVACLIGAVIGFYDGLIGPGTGSFLVIAL 172

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           +   G +  +A+A +  V+      AL+  +  G
Sbjct: 173 VSAMGYAFLEASAKAKIVNMATNAGALMFFLPHG 206


>gi|199599191|ref|ZP_03212594.1| hypothetical protein LRH_10050 [Lactobacillus rhamnosus HN001]
 gi|199589944|gb|EDY98047.1| hypothetical protein LRH_10050 [Lactobacillus rhamnosus HN001]
          Length = 246

 Score = 58.9 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 74/210 (35%), Gaps = 13/210 (6%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +  S      +  +    ++  G ++ ++         +  ++   +   +  S++    
Sbjct: 43  LAFSFLAFIISGWLGSRHYQHEGLMDRRVAYLLSGGSFVGAIIGVRLNLLLPTSWVQFLL 102

Query: 131 AIFCLLMGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
            +  LL GI +L + R   +          +  I G+VTG +    G GG +    L++ 
Sbjct: 103 YLVVLLSGIAILIQQRHPPKPGVDHLNQPVLLVILGVVTGLICALSGAGGPVLVMPLLVL 162

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
            G   + A   +   S  I+ PA +  +     +  LP           + II+    + 
Sbjct: 163 LGCEPHAAVGIALLNSVFISLPAAVGYLSQVQFMTTLPL----------LAIIIVTHGIG 212

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             + +++   I  + L  G ++       +
Sbjct: 213 VIVGSRIGPKIDGRLLKNGTAIFSIILGCI 242


>gi|167038942|ref|YP_001661927.1| hypothetical protein Teth514_0274 [Thermoanaerobacter sp. X514]
 gi|300913468|ref|ZP_07130785.1| protein of unknown function DUF81 [Thermoanaerobacter sp. X561]
 gi|307723517|ref|YP_003903268.1| hypothetical protein Thet_0316 [Thermoanaerobacter sp. X513]
 gi|166853182|gb|ABY91591.1| protein of unknown function DUF81 [Thermoanaerobacter sp. X514]
 gi|300890153|gb|EFK85298.1| protein of unknown function DUF81 [Thermoanaerobacter sp. X561]
 gi|307580578|gb|ADN53977.1| protein of unknown function DUF81 [Thermoanaerobacter sp. X513]
          Length = 253

 Score = 58.9 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 98/267 (36%), Gaps = 29/267 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++YI  +    F +  +  + G GGG++ +P L       G+  +     A+GT+    +
Sbjct: 3   IEYIIALCGIGFAAAFIDSIAG-GGGIISLPGLLVL----GVPPAF----ALGTNKFAAS 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  S +   ++   +  +LK  +F   +  ++    +  +D S L     I  + + I
Sbjct: 54  CASFTSSLTFIKYRVYDGDLLKYLVFGTLLGAILGVKTVLLLDSSQLRIIIIILMIFVAI 113

Query: 140 LMLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIY 193
             L    +  E KF         +  I  ++ GF  G  G G G F   L +        
Sbjct: 114 YTLFVKNIGNENKFEGVNKKTIAIGLIISIILGFYDGFFGPGTGSFYIFLFLTLLNYDFK 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            +      ++ +    +L++    G  L     +S+        + +    IL   L TK
Sbjct: 174 ISAGNGKILNFVSNITSLIMFALHGKIL-----YSI-------AIPMALAMILGARLGTK 221

Query: 254 LSYMIGKKYLTIGFS--MIMFTTSFVF 278
           L+   G + +        +++    +F
Sbjct: 222 LAIKNGARLIRPILISVTLLYAVKMIF 248


>gi|114563623|ref|YP_751136.1| hypothetical protein Sfri_2453 [Shewanella frigidimarina NCIMB 400]
 gi|114334916|gb|ABI72298.1| protein of unknown function DUF81 [Shewanella frigidimarina NCIMB
           400]
          Length = 267

 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 79/206 (38%), Gaps = 13/206 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  +    ++   + ++G +  + G GGGL+ +P L  A         +    A+GT+  
Sbjct: 17  ELTLQLAVILFFVALVAGFIDSIAG-GGGLLTIPALMWA--------GLPPAAALGTNKL 67

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                S  + +   R G ++++ +K  +    I   + ++++  +D   L        L 
Sbjct: 68  QACGGSFFASLYFVRKGMVDLRSIKLSLICAFIGASIGTILVQMIDAKLLEVVLPFLILA 127

Query: 137 MGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
           +G   L   ++  + +      +   +   +  G   G  G G G  F    +   G  +
Sbjct: 128 IGCYFLFSKKISEQDRQQVLTPSVFAFTAALGVGLYDGFFGPGTGSFFALAFVSLAGFGL 187

Query: 193 YKATATSAGVSALIAFPALLVRIYSG 218
            KATA +  ++      +L+  +  G
Sbjct: 188 AKATAHAKLLNFATNIASLIFFLIGG 213


>gi|163738096|ref|ZP_02145512.1| hypothetical protein RGBS107_06779 [Phaeobacter gallaeciensis
           BS107]
 gi|163742508|ref|ZP_02149894.1| hypothetical protein RG210_06464 [Phaeobacter gallaeciensis 2.10]
 gi|161384093|gb|EDQ08476.1| hypothetical protein RG210_06464 [Phaeobacter gallaeciensis 2.10]
 gi|161388712|gb|EDQ13065.1| hypothetical protein RGBS107_06779 [Phaeobacter gallaeciensis
           BS107]
          Length = 252

 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 96/261 (36%), Gaps = 25/261 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D + L++ A F +G +  + G GGGL+ VPVL  A              A+ T+      
Sbjct: 7   DLLLLLMAAGFAAGFIDAVAG-GGGLITVPVLLLA--------GANPITALATNKIQGLF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  + + + R G ++++       +  + ++  +L+IS +  +++     +  + + + 
Sbjct: 58  GAATAAISYSRGGHVDLRAQAGSALIAGLASICGALLISVLPTTWIRWILPLLLIGIAVF 117

Query: 141 MLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
              +  L      R+            + G   G LG G G F  L  +   G  I +AT
Sbjct: 118 FATKKGLDDSDRTRRLSPTLFAVTIVPLCGLYDGLLGPGAGSFYMLGFVSLAGFGILRAT 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++      ALL   +        P W +G       L +    I+   +   ++ 
Sbjct: 178 AHTKLLNFASNAGALLAFAFV-----ATPWWGVG-------LAMGAAQIVGARVGAGIAQ 225

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G + +     +     +  
Sbjct: 226 KQGARMIKPLLVLTSVVLALR 246


>gi|303252882|ref|ZP_07339041.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|307247873|ref|ZP_07529909.1| Permease with 5 transmembrane domains [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|302648312|gb|EFL78509.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|306855675|gb|EFM87842.1| Permease with 5 transmembrane domains [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 258

 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 81/206 (39%), Gaps = 13/206 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +   D + ++   + ++G +  + G GGGL+ +P L            I   +A+GT+  
Sbjct: 2   ELSFDVLAMLFTIATIAGFIDAIAG-GGGLLTIPALL--------SAGIPPTIALGTNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                S  + +   R   +N++ +   I +  I     ++ +  +D + L        L+
Sbjct: 53  QACGGSFSASLYFVRQKAVNLRQISLLILLTFIGAACGTIFVQMIDVNSLKMLLPFLVLI 112

Query: 137 MGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           +GI  L    +  E   ++       +      GF  G  G   G F  L  +L  G ++
Sbjct: 113 IGIYFLFSPTVGNEDRKQRISFPLFAFSAAAGIGFYDGMFGPATGSFFTLAFILLLGFNL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSG 218
            KA A +  ++    F +L+  +  G
Sbjct: 173 PKAVAHAKVLNFTSNFASLIFFMLGG 198


>gi|15614685|ref|NP_242988.1| hypothetical protein BH2122 [Bacillus halodurans C-125]
 gi|10174741|dbj|BAB05841.1| BH2122 [Bacillus halodurans C-125]
          Length = 259

 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 104/260 (40%), Gaps = 26/260 (10%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +  ++ +  ++ + F++  +  + G GGGL+ +P L  A    G+  S    VA+GT+ 
Sbjct: 2   GEISIEVLIFLLASGFVAAFIDSVVG-GGGLISIPALLFA----GLPPS----VALGTNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 ++ S +   + G IN K++   + +  + + +   ++  +   FL        +
Sbjct: 53  LAATIGALTSTINFLQSGHINKKLVFTLLPLSIVGSALGVYIVQLIPSEFLRPIILFLLI 112

Query: 136 LMGILMLKRDRLYCE---RKFPDNYVKYIWGMV--TGFLSGALGVGGGIFTNLLMLFYGA 190
           L+ I  + +     E   +  P   + ++   V   GF  G LG G G F   L L  G 
Sbjct: 113 LVTIYTVFKKNWGMESNVKHLPGKMIGFVIFAVLMLGFYDGFLGAGTGSFLIFLFLLLGF 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           +  ++   +  ++    F AL+  +                V+    + +    I+   +
Sbjct: 173 NFVESAGNAKVLNLGSNFAALITFMLFQS------------VHFFYGIAMGIAMIVGAYV 220

Query: 251 ATKLSYMIGKKYLTIGFSMI 270
            ++++   G  Y+ + F  I
Sbjct: 221 GSRVAIKRGAAYVKVLFIGI 240


>gi|295706028|ref|YP_003599103.1| hypothetical protein BMD_3921 [Bacillus megaterium DSM 319]
 gi|294803687|gb|ADF40753.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 254

 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 99/268 (36%), Gaps = 36/268 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I +     GTL GL GVGG  ++ P+L       GI+ S    +A+GT L   + T +  
Sbjct: 5   ITLMGLFVGTLVGLTGVGGAALLTPLLIVL----GINPS----IAVGTDLVYNSITKLFG 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
             +H +  TIN K+ K   F    + V+  + +           + +  A      L+ I
Sbjct: 57  VAQHYKQRTINFKLAKYLAFGSIPSAVLAIVTLHAFPSFHEHQETIIKHALGYVMTLVAI 116

Query: 140 LMLKR---------DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YG 189
            ++ R         +R           +    G+V GF+ G   +G G    + ML+ + 
Sbjct: 117 SIIFRVFFDKLIRPNRFQEMDLNQKKGLTIGIGVVFGFIVGLTSIGSGSLFAIAMLYLFK 176

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
               +   T    + L+   A ++              S G V+      +L  SI    
Sbjct: 177 LKTSELVGTDIAHAFLLVTAAGILNA------------SFGSVDYMLTANLLTGSIPGVL 224

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + ++LS  +  + L    + I+  +   
Sbjct: 225 IGSRLSTKVPSRPLQAIMATIILISGIK 252


>gi|289577560|ref|YP_003476187.1| hypothetical protein Thit_0308 [Thermoanaerobacter italicus Ab9]
 gi|289527273|gb|ADD01625.1| protein of unknown function DUF81 [Thermoanaerobacter italicus Ab9]
          Length = 253

 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 97/267 (36%), Gaps = 29/267 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++YI  +    F +  +  + G GGG++ +P L       G+  +     A+GT+    +
Sbjct: 3   IEYIVALCGIGFAAAFIDSIAG-GGGIISLPGLLVL----GVPPAF----ALGTNKFAAS 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  S +   ++   +  +LK  +F   +  ++    +  +D S L     I  + + I
Sbjct: 54  CASFTSSLTFIKYRVYDGDLLKYLVFGTLLGAILGVKTVLLLDSSQLRIIIIILMIFVAI 113

Query: 140 LMLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIY 193
             L    +  E K          +  I  ++ GF  G  G G G F   L +        
Sbjct: 114 YTLFVKNIGNENKVKGVNKKTIAIGLIISIILGFYDGFFGPGTGSFYIFLFLTLLNYDFK 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            +      ++ +    +L++    G  L     +S+        + +    IL   L TK
Sbjct: 174 MSAGNGKILNFVSNITSLIMFALHGKIL-----YSI-------AIPMALAMILGARLGTK 221

Query: 254 LSYMIGKKYLTIGFS--MIMFTTSFVF 278
           L+   G + +        +++    +F
Sbjct: 222 LAIKNGARLIRPILISVTLLYAVKMIF 248


>gi|169832692|ref|YP_001695177.1| hypothetical protein SPH_1922 [Streptococcus pneumoniae
           Hungary19A-6]
 gi|168995194|gb|ACA35806.1| domain of unknown function, putative [Streptococcus pneumoniae
           Hungary19A-6]
          Length = 256

 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 79/212 (37%), Gaps = 16/212 (7%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM----ISHVDKS 124
           +A  +S  V     + +     +   I  +++    F   +   +  L+    +S +   
Sbjct: 43  IAFYSSFSVFIMAIISTIKRFSQSKEIKWRLIFTVSFSSVLGGFLGHLIFQVLLSQLSVR 102

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-L 183
            ++    I   +M ++           +F       I G++ G +S  LG+GGG     L
Sbjct: 103 LVSIVQMILLFVMLLVSFVLTDFKKTYQFDKIGFYMICGLLLGLISSFLGIGGGPLNVSL 162

Query: 184 LMLFYGASIYKATATSAGVSALIAFPA-LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           LM+F+  SI +AT  S  +           + + +G     L P          V +I  
Sbjct: 163 LMVFFSISIKEATMYSLAIIFFSQLSHLATIVVVTGLNQYHLAP----------VPVIFL 212

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            SI    L T +S ++ + ++   F  ++F  
Sbjct: 213 ASICGGVLGTVVSKVLPENWVRYCFKGMLFFV 244


>gi|154686411|ref|YP_001421572.1| YrkJ1 [Bacillus amyloliquefaciens FZB42]
 gi|154352262|gb|ABS74341.1| YrkJ1 [Bacillus amyloliquefaciens FZB42]
          Length = 175

 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 62/180 (34%), Gaps = 17/180 (9%)

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF----PDNYV 158
               + I +++         +  +N  + I  ++  ++M        + +     P   +
Sbjct: 1   MGLSILIGSLMGGYGSHFFSEDIINLVYGILVIIAAVMMFIPKTGTEDNQSDHIRPPKIL 60

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYS 217
             I   V G  SG +G GG      LML           ATS  V+ + +    + ++  
Sbjct: 61  TSIMTFVIGLASGIVGAGGAFLLFPLMLVVLKIPTKITIATSLAVTFISSIGTTVTKLVI 120

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G  +  +P            L+I+  S++ +P+   +   +    L      ++  T+  
Sbjct: 121 G-QVPFMPA-----------LVIVAASLIASPIGVLIGKKMNANILQGILIFVILITTVK 168



 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  + +F+ G  SG+ G GG  ++ P++    +       I   + + TSL V   +S+
Sbjct: 59  ILTSIMTFVIGLASGIVGAGGAFLLFPLMLVVLK-------IPTKITIATSLAVTFISSI 111

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + +     G +        +    I + +  L+   ++ + L        L+  + +  
Sbjct: 112 GTTVTKLVIGQVPFMPALVIVAASLIASPIGVLIGKKMNANILQGILIFVILITTVKIWF 171

Query: 144 R 144
            
Sbjct: 172 D 172


>gi|239994970|ref|ZP_04715494.1| hypothetical protein AmacA2_10850 [Alteromonas macleodii ATCC
           27126]
          Length = 84

 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 37/78 (47%)

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            V  +I+ PA L  ++ G      P  + G+VN+   + I+P+++L  P+   ++  +  
Sbjct: 1   AVGLIISLPAALTLLFVGTTPVDAPFATYGYVNLLGFVCIVPLTVLFAPVGASIANKLDA 60

Query: 261 KYLTIGFSMIMFTTSFVF 278
             L   F++++  T    
Sbjct: 61  GLLKKIFAVVLIITGLRM 78


>gi|330937877|gb|EGH41692.1| hypothetical protein PSYPI_04394 [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 261

 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 99/273 (36%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +VA  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   FVVAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + HR++  I+ K+            ++T   +S +        + + +A     LL  +
Sbjct: 60  VLVHRKNDNIDWKVTGLLTLGSVPAVLMTLWFLSTLHTAPEALNAIIKQALGFVLLLTAL 119

Query: 140 LMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + +L                     +  I G++ G +     +G G      L +L
Sbjct: 120 AVLFKKKLLAFAHRRGDGYSFFSGTSLTVLTVITGLILGTMVALTSIGAGALGTVALFIL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +              + GL   S+G +N   +  +L  S+ 
Sbjct: 180 YPLLPTRRLVGTEIAHAVPLTL------------VAGLGHASMGNMNWELLGWLLMGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + ++  +    L    ++++    F  A
Sbjct: 228 GIYLGSHMAGRVSDDLLRPFLAIMLGMIGFKLA 260



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 45/120 (37%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 148 VLTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G +N ++L   +        + S M   V    L    AI   ++G  +  
Sbjct: 202 VAGLGHASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDDLLRPFLAIMLGMIGFKLAF 261



 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                 + G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 4   GGLGFVVAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 61


>gi|229103095|ref|ZP_04233782.1| hypothetical protein bcere0019_22460 [Bacillus cereus Rock3-28]
 gi|228680284|gb|EEL34474.1| hypothetical protein bcere0019_22460 [Bacillus cereus Rock3-28]
          Length = 252

 Score = 58.5 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 105/265 (39%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  ++ + L+ + + L+G +  + G GGG++ +PV+            +   VA+ T+  
Sbjct: 2   DLTIELLILLFLVAILAGWIDTIAG-GGGMITIPVMLLV--------GMSPSVAIATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  ++M+ +   +   IN+K ++  I +    +++   +I  +   +L        ++
Sbjct: 53  QGSSGTLMATVIFIKKKEINLKEMRLSILMTFFGSILGGWLILQIRAEYLIMILPFLLII 112

Query: 137 MGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFT-NLLMLFYGASI 192
           +G+  L    +  E   RK              GF  G  G G G       +L  G S 
Sbjct: 113 IGLYFLLSPNIANEDRPRKISMLLFALTVAPFLGFYDGFFGPGTGSLIAVAFILLCGYSA 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++    F ALL  I  G        W++G       LI++   I+ + +  
Sbjct: 173 TRATANAKILNFTSNFAALLYFIIFGQ-----IDWTIG-------LIMMLGQIIGSYIGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           K+    G   +     ++ F  +  
Sbjct: 221 KMVLTKGTSLIRPIVVIVCFVMAIK 245


>gi|326771830|ref|ZP_08231115.1| YtnM protein [Actinomyces viscosus C505]
 gi|326637963|gb|EGE38864.1| YtnM protein [Actinomyces viscosus C505]
          Length = 347

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 72/205 (35%), Gaps = 14/205 (6%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T++ S   H + G  + +++        +     + ++SH+         A   +L+G
Sbjct: 52  IGTTLASGASHWKLGNTDPRLVVRLGLPGAVGAFGGATVLSHLSTRAATPVTASLLILLG 111

Query: 139 ILMLKRDRLYC------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
             +L R  L         R      +    GMV GF+    G G G      +L  G + 
Sbjct: 112 TYVLGRFALRPPRGSGSRRSPHGRRLLVPLGMVGGFVDATGGGGWGPVVTTTLLTGGRTA 171

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +    S G S  +   A      +G G  G        +++G VL +L   ++  P++ 
Sbjct: 172 PRTVVGSVGASEFLVTVAASAGFLTGLGTAG--------ISLGIVLTLLAGGLVAAPISA 223

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
            L   +    L      ++  T+  
Sbjct: 224 WLVSRLPGAVLGTAVGGLILATNLR 248


>gi|302059058|ref|ZP_07250599.1| hypothetical protein PsyrptK_03642 [Pseudomonas syringae pv. tomato
           K40]
          Length = 261

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 99/273 (36%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +VA  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   FVVAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + HR++  I+ K+            ++T   +S +        + + +A     LL  +
Sbjct: 60  VLVHRKNDNIDWKVTGLLTLGSVPAVLLTLWFLSTLHTAPDALNAIIKQALGYVLLLTAL 119

Query: 140 LMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + +L                     +  I G++ G +     +G G      L +L
Sbjct: 120 AVLFKKKLLAFAHGRGDGQSFFSGTSLTVLTVITGLILGTMVALTSIGAGALGTVALFIL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +              + GL   S+G +N   +  +L  S+ 
Sbjct: 180 YPLLPTRRLVGTEIAHAVPLTL------------VAGLGHASMGNMNWELLGWLLMGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + ++  +    L    ++++    F  A
Sbjct: 228 GIYLGSHMAGRVSDDLLRPFLAIMLGMIGFKLA 260



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 45/120 (37%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 148 VLTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G +N ++L   +        + S M   V    L    AI   ++G  +  
Sbjct: 202 VAGLGHASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDDLLRPFLAIMLGMIGFKLAF 261



 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                 + G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 4   GGLGFVVAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 61


>gi|150019846|ref|YP_001312100.1| hypothetical protein Cbei_5038 [Clostridium beijerinckii NCIMB
           8052]
 gi|149906311|gb|ABR37144.1| protein of unknown function DUF81 [Clostridium beijerinckii NCIMB
           8052]
          Length = 258

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 80/203 (39%), Gaps = 16/203 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +I    F +G +  + G GGG++ +P    A         + +H+A GT+       +
Sbjct: 8   LLIICPLVFCAGFVDAVAG-GGGIISLPAYIFA--------GMPIHMAYGTNKFANGIGT 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + ++    G I +K          I +   + ++  +D+ +L     I   ++ I +L
Sbjct: 59  FAASIKFLSSGNIKIKPALISAIGAIIGSWFGTQLVLLLDEKYLQYCLIIILPIVAIFLL 118

Query: 143 KRDRLYCERKFPDN------YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
              ++  E             V  I G+V G   G  G G G F  L    F G ++  A
Sbjct: 119 FNRKIGVENNEKKVEHRKIYLVAGIIGLVIGAYDGFFGPGTGTFLVLAFTSFLGFNLITA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
           +  +  V+    F AL+  I +G
Sbjct: 179 SGNAKIVNLASNFAALIAYILNG 201


>gi|229551036|ref|ZP_04439761.1| protein of hypothetical function [Lactobacillus rhamnosus LMS2-1]
 gi|229315631|gb|EEN81604.1| protein of hypothetical function [Lactobacillus rhamnosus LMS2-1]
          Length = 246

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 74/210 (35%), Gaps = 13/210 (6%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +  S      +  +    ++  G ++ ++         +  ++   +   +  S++    
Sbjct: 43  LAFSFLAFIISGWLGSRHYQHEGLMDRRVAYLLSGGSFVGAIIGVRLNLLLPTSWVQFLL 102

Query: 131 AIFCLLMGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
            +  LL GI +L + R   +          +  I G+VTG +    G GG +    L++ 
Sbjct: 103 YLVVLLSGIAILIQQRHPPKPGVDHLNQPVLLVILGVVTGLICALSGAGGPVLVMPLLVL 162

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
            G   + A   +   S  I+ PA +  +     +  LP           + +I+    + 
Sbjct: 163 LGCEPHAAVGIALLNSVFISLPAAVGYLSQVQFMTTLPL----------LAMIIVTHGIG 212

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             + +++   I  + L  G ++       +
Sbjct: 213 VIVGSRIGPKIDGRLLKNGTAIFSIILGCI 242


>gi|294500683|ref|YP_003564383.1| hypothetical protein BMQ_3937 [Bacillus megaterium QM B1551]
 gi|294350620|gb|ADE70949.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
          Length = 254

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 99/268 (36%), Gaps = 36/268 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I +     GTL GL GVGG  ++ P+L       GI+ S    +A+GT L   + T +  
Sbjct: 5   ITLMGLFVGTLVGLTGVGGAALLTPLLIVL----GINPS----IAVGTDLVYNSITKLFG 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
             +H +  TIN K+ K   F    + V+  + +           + +  A      L+ I
Sbjct: 57  VAQHYKQRTINFKLAKYLAFGSIPSAVLAIVTLHAFPSFHEHQETIIKHALGYVMTLVAI 116

Query: 140 LMLKR---------DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YG 189
            ++ R         +R           +    G+V GF+ G   +G G    + ML+ + 
Sbjct: 117 SIIFRVFFDKFIRPNRFQEMDLNQKKGLTIGIGVVFGFIVGLTSIGSGSLFAIAMLYLFK 176

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
               +   T    + L+              + G+   S G V+      +L  SI    
Sbjct: 177 LKTSELVGTDIAHAFLLV------------TVAGILNASFGSVDYMLTANLLTGSIPGVL 224

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + ++LS  +  + L    + I+  +   
Sbjct: 225 IGSRLSTKVPSRPLQAIMATIILISGIK 252


>gi|33600125|ref|NP_887685.1| hypothetical protein BB1139 [Bordetella bronchiseptica RB50]
 gi|33567723|emb|CAE31637.1| putative membrane protein [Bordetella bronchiseptica RB50]
          Length = 284

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 82/257 (31%), Gaps = 46/257 (17%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +   +  +  L G+ G+  G+ +VP+L     L GID    +H A+  S+  +   S 
Sbjct: 6   LWLFAMALGASALGGMLGMASGIFIVPLLV----LWGID----VHAAIAASIVSVIACSC 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S     + G  ++++         +  +    ++  V  + L   FA+  ++    ML 
Sbjct: 58  GSAAAFLQSGLTHVRLAVVLETATTLGALTGVFLVGAVPVAALYALFAVVLVVSAWQMLA 117

Query: 144 RD------------RLYCERKFPDNYVKYIWG-----------------MVTGFLSGALG 174
           R             R     +    Y     G                    G LS  LG
Sbjct: 118 RRRDPARASGAPACRWAGALRLHGRYRDPAAGRHRRYRVQRLPLGMSLMYGAGVLSALLG 177

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G+     M       +  ++ATS  +  + A  +  V    G             V 
Sbjct: 178 IGSGVLKIPAMDSALRLPLKVSSATSNFMIGVTAAASAAVYFARGEIDPA--------VA 229

Query: 234 IGAVLIILPISILITPL 250
               L  +  S+L   +
Sbjct: 230 GPVALGSVAGSVLGARI 246



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 7/111 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G LS L G+G G++ +P +  A +L        + V+  TS  +I  T+  S   +   
Sbjct: 169 AGVLSALLGIGSGVLKIPAMDSALRL-------PLKVSSATSNFMIGVTAAASAAVYFAR 221

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           G I+  +           +V+ + ++  V    L   F     L+ + ML 
Sbjct: 222 GEIDPAVAGPVALGSVAGSVLGARILMRVSGERLRLLFVAVLALLAVQMLL 272



 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 42/123 (34%), Gaps = 12/123 (9%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
               +   +    L G LG+  GIF   L++ +G  ++ A A S       +  +    +
Sbjct: 5   GLWLFAMALGASALGGMLGMASGIFIVPLLVLWGIDVHAAIAASIVSVIACSCGSAAAFL 64

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            SG     L             +++   + L       L   +    L   F++++  ++
Sbjct: 65  QSGLTHVRL------------AVVLETATTLGALTGVFLVGAVPVAALYALFAVVLVVSA 112

Query: 276 FVF 278
           +  
Sbjct: 113 WQM 115


>gi|299133315|ref|ZP_07026510.1| protein of unknown function DUF81 [Afipia sp. 1NLS2]
 gi|298593452|gb|EFI53652.1| protein of unknown function DUF81 [Afipia sp. 1NLS2]
          Length = 260

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 70/217 (32%), Gaps = 19/217 (8%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           HVA+GT    +A  + ++F  H R G +       +     +     S +   +D   L 
Sbjct: 45  HVAIGTGALAVAVNAFVAFAGHARAGNVRWLFAGIFAAAGTLGAFAGSSIGKVIDGQHLL 104

Query: 128 KAFAIFCLLMGILMLKRDRLYC----ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
             F +  + +G+ ML+          E              + G  SG  G+GGG     
Sbjct: 105 FFFGLAMVAVGLAMLRPTPPDGTCERETDLKTCSGVIAVAFIVGAASGFFGIGGGFLIVP 164

Query: 184 -LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            L+L  G  +  A  +S            L   +S            GF++       + 
Sbjct: 165 GLVLATGIPMIHAVGSSLFAVGCFGLATALNYAWS------------GFIDGPVAGTFII 212

Query: 243 ISILITPLATKLSYMIG--KKYLTIGFSMIMFTTSFV 277
             +    L   L+  +   K  L   FS I+   +  
Sbjct: 213 GGVAGGLLGMLLANHLSRGKNLLRYVFSAIVLIVAAY 249


>gi|296156980|ref|ZP_06839817.1| protein of unknown function DUF81 [Burkholderia sp. Ch1-1]
 gi|295892866|gb|EFG72647.1| protein of unknown function DUF81 [Burkholderia sp. Ch1-1]
          Length = 267

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
             +       +  A   +L  ++ ++ +  +E  R   +  +            T + + 
Sbjct: 28  PALVFGMGWPIQQATPVALVAVSSSAAVGALEAFRKRLVRYRAALFMAAAGIPATALGAR 87

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI--------------- 161
           +   + +  L   FA   L + + +L++         P++ +                  
Sbjct: 88  LARALPQRLLLALFAGVMLFVAVRLLRQTLRTGAAPPPESALCVARLNPATGRLAWSWAT 147

Query: 162 ------WGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVR 214
                  G VTG ++G LGVGGG     +M       ++   ATS  V  L+    ++  
Sbjct: 148 GAALAATGAVTGLMTGLLGVGGGFIIVPMMRKLTNVPMHGVVATSLMVITLVGGGGVIAT 207

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +Y G  L            +  VL     +          S+ +    + +GF+ I+   
Sbjct: 208 MYHGASLP-----------LEVVLWFSLATAAGMLGGRLASHRLPGHQVQLGFATILICV 256

Query: 275 SF 276
           + 
Sbjct: 257 AL 258



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 50/114 (43%), Gaps = 8/114 (7%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G ++GL GVGGG ++VP++ K         ++ MH  + TSL VI        +    
Sbjct: 157 VTGLMTGLLGVGGGFIIVPMMRKL-------TNVPMHGVVATSLMVITLVGGGGVIATMY 209

Query: 92  HGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           HG  + ++++  +        +   L    +    +   FA   + + + ++ +
Sbjct: 210 HGASLPLEVVLWFSLATAAGMLGGRLASHRLPGHQVQLGFATILICVALGLMAK 263


>gi|315639199|ref|ZP_07894361.1| inner membrane protein YfcA [Campylobacter upsaliensis JV21]
 gi|315480525|gb|EFU71167.1| inner membrane protein YfcA [Campylobacter upsaliensis JV21]
          Length = 251

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 94/265 (35%), Gaps = 28/265 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    ++   +  +G +  + G GGGL+ +P L        +   I  H+A+ T+     
Sbjct: 5   LSVYAILFCVAIFAGFIDSIVG-GGGLITIPAL--------MASGIPPHLALATNKLQSV 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +   + R  T  +  L   +F   +     +  +  +    L     IF  L  +
Sbjct: 56  FGSFTAAATYFRSTT--LPHLAWGVFFTALGAAFGTWSVLLIKDEHLKLIILIFLSLTFL 113

Query: 140 LMLKRDRLYCERKFPD----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYK 194
               +  L      P          I+G+  GF  G LG G G F     + + G ++ K
Sbjct: 114 YTAFKPSLGKRESEPKIHNIKIFHLIFGLTLGFYDGFLGPGTGSFWIFACVLFLGFNMKK 173

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+  +  ++      AL + ++            L  V     L++    +    L +KL
Sbjct: 174 ASINTKILNFSSNIIALFIFLW------------LYDVLWLVGLLMGVGQVFGAFLGSKL 221

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVFA 279
                 K++ + F +++  T    A
Sbjct: 222 VLKTNGKFIKVLFLVVVGATIIKVA 246


>gi|310779358|ref|YP_003967691.1| protein of unknown function DUF81 [Ilyobacter polytropus DSM 2926]
 gi|309748681|gb|ADO83343.1| protein of unknown function DUF81 [Ilyobacter polytropus DSM 2926]
          Length = 246

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 96/262 (36%), Gaps = 27/262 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              ++ V + ++G ++ + G GGG++++ +L            + + + +GT+       
Sbjct: 2   IYIILAVGALIAGVITAIAG-GGGMLIMAILMMV--------DMPIKMIIGTNRLSALMD 52

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  S   + ++G +N   LK  I    I T+  + M++ +D   L +   +  + + I  
Sbjct: 53  NGTSAYHYNKNGNVNKTFLKYAIIPGAIGTIAGTKMLAMMDGKVLERLIPMILIALVIHS 112

Query: 142 LKRDRLYCERKFPDNYVKYIW-----GMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKA 195
           L   ++  E  F     K I        + G   G  G+  G F  L +++ +     +A
Sbjct: 113 LTSKKVGIESNFEGFTKKTIAMGIIVTFIIGVYMGFFGMAAGSFFALALVYIFKFDFLEA 172

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            AT   +  L+   ++      G             ++    L I    IL +   +  +
Sbjct: 173 VATVKPLLFLMGVTSIFFYAAEGL------------IDYKYALFITVFRILGSRFGSGYA 220

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
              G K +   F  +       
Sbjct: 221 SKKGSKLVKPVFLTLCMAIVLK 242


>gi|291002943|ref|ZP_06560916.1| membrane protein, putative (partial match) [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 286

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 87/264 (32%), Gaps = 31/264 (11%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +     L+G L GL G+GGG + +P+L+  F   G+        A+ T L   A T  + 
Sbjct: 1   MTATGLLTGVLVGLTGMGGGALAMPLLTLVF---GVPPLA----AVSTDLVASAVTKPIG 53

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS---FLNKAFAIFCLLMGILML 142
              H R  T++++++            V S++   + +     L        ++    + 
Sbjct: 54  AAVHLRRRTVDLRLVGLLCLGSLPCAAVGSVLAGTLGERTQDVLRIVAGAAVVVAAGTLF 113

Query: 143 KR---DRLYCERKFPDNYVKYIWGMVTGFLSGA------LGVGGGIFTNLLMLFYGASIY 193
            R   DR            + +  +  G ++G       +G G  +   LL+L       
Sbjct: 114 VRMYLDRTRAPDPPEHPRARPVATVALGAVAGLVVGTTSVGSGSIVIVCLLLLQRRLPSA 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +   T    +  +   A    +  G    GL            V  +L  S+        
Sbjct: 174 RLVGTDLAQAVPLVLVAAGGHLLVGDVEFGL------------VASLLAGSVPGVLAGAV 221

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           LS       + +    ++  T  V
Sbjct: 222 LSARTPDVPIRVALGTMLILTGLV 245



 Score = 35.4 bits (81), Expect = 8.2,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 43/116 (37%), Gaps = 6/116 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +    ++G + G   VG G +   V+     L     S  +   +GT L    P  +++ 
Sbjct: 138 VALGAVAGLVVGTTSVGSGSI---VIVCLLLLQRRLPSARL---VGTDLAQAVPLVLVAA 191

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             H   G +   ++   +       +  +++ +      +  A     +L G+++L
Sbjct: 192 GGHLLVGDVEFGLVASLLAGSVPGVLAGAVLSARTPDVPIRVALGTMLILTGLVLL 247


>gi|16078305|ref|NP_389122.1| integral inner membrane protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221309089|ref|ZP_03590936.1| hypothetical protein Bsubs1_06851 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313416|ref|ZP_03595221.1| hypothetical protein BsubsN3_06787 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318339|ref|ZP_03599633.1| hypothetical protein BsubsJ_06726 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221322612|ref|ZP_03603906.1| hypothetical protein BsubsS_06832 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81342352|sp|O34578|YJNA_BACSU RecName: Full=UPF0721 transmembrane protein yjnA
 gi|2612912|gb|AAC46336.1| unknown [Bacillus subtilis subsp. subtilis str. 168]
 gi|2633594|emb|CAB13097.1| putative integral inner membrane protein [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 254

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 95/268 (35%), Gaps = 36/268 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II+     G L GL GVGG  ++ P+L       GI+ S    +A+GT L   + T +  
Sbjct: 5   IILMGLFVGALVGLTGVGGAALLTPLLIVL----GINPS----IAVGTDLVYNSITKLFG 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
              H R  TIN K++K        +  +   ++             +  A      L+ I
Sbjct: 57  VASHWRQKTINFKLVKYLAIGSIPSASLAIGILHLFPAFHQHQEEIIKHALGYVLTLVAI 116

Query: 140 LM---------LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YG 189
            +         L+ +R           +  + G+V GF+ G   +G G    + M++ + 
Sbjct: 117 SIIVRLFLDRKLRPNRWQLMPLENKRALTILIGVVFGFIVGLTSIGSGSLFAIAMIYLFN 176

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
               +   T    + L+   A ++              S G V+      +L  SI    
Sbjct: 177 MKASQIVGTDIAHAFLLVTAAGILNA------------SFGSVDYMLAANLLLGSIPGVL 224

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + + LS     + L    + I+  +   
Sbjct: 225 IGSHLSPRFSPRPLQFIMASIILVSGLK 252


>gi|281207304|gb|EFA81487.1| hypothetical protein PPL_05475 [Polysphondylium pallidum PN500]
          Length = 500

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 12/152 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L+ + S ++G L+ L G+GGG++  PVL      MG+   I       TS  +I  TS
Sbjct: 357 IILLGILSVVAGILASLLGIGGGMIKGPVLL----AMGLSPDIVA----ATSSFMILFTS 408

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC----LLMG 138
             S  ++   G + +     +  +      V +  +  V   +  +++ IF     +++ 
Sbjct: 409 ASSAFQYILLGKLRLDYGLVYYIIGFAACFVGTQTLIWVVNKYKKRSYIIFLITAIIVIS 468

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
            ++L    +    K+ +   + I    +G  S
Sbjct: 469 TILLVVTEVLDLEKYKNQPFQSICSPGSGGSS 500



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 28/61 (45%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  I  +V G L+  LG+GGG+    ++L  G S     ATS+ +    +  +    I  
Sbjct: 359 LLGILSVVAGILASLLGIGGGMIKGPVLLAMGLSPDIVAATSSFMILFTSASSAFQYILL 418

Query: 218 G 218
           G
Sbjct: 419 G 419


>gi|300776790|ref|ZP_07086648.1| permease [Chryseobacterium gleum ATCC 35910]
 gi|300502300|gb|EFK33440.1| permease [Chryseobacterium gleum ATCC 35910]
          Length = 276

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 96/259 (37%), Gaps = 45/259 (17%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++++P+L+  F        + MH A+G SL  +  TS  + +   + G  NM+I      
Sbjct: 27  VIIIPLLTLGF-------GVPMHYAIGASLISVIGTSSGAAVAFVKEGFTNMRIGMFLEI 79

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD--------------RLYCER 151
                 ++ +L+   ++ + +   FA   LL  IL LK                +L    
Sbjct: 80  ATTAGAIIGALVSGMLNPNTIGIIFASILLLTVILNLKGKPDHQEPLIKGSLEDKLKLYG 139

Query: 152 KFPDNYVK-----------YIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATS 199
            FPD  V            ++  M  G +SG LG+G G    L M          +T TS
Sbjct: 140 TFPDKGVLKSYSARNTVPGFLMMMFAGAMSGLLGIGSGALKVLAMDNMMKLPFKVSTTTS 199

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +  + A  + L+    G  +  +            ++ ++  S     + +K   +  
Sbjct: 200 NFMIGVTAVASALIYFQRGEIIPVIVA--------PVLIGVVIGSF----IGSKTLMVSK 247

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            K L + F++++   S   
Sbjct: 248 TKKLKVFFAIVITILSVYM 266



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
             +G +SGL G+G G + V         M     +   V+  TS  +I  T+V S + + 
Sbjct: 163 MFAGAMSGLLGIGSGALKV-------LAMDNMMKLPFKVSTTTSNFMIGVTAVASALIYF 215

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + G I   I+   +  + I + + S  +       L   FAI   ++ + M+  
Sbjct: 216 QRGEIIPVIVAPVLIGVVIGSFIGSKTLMVSKTKKLKVFFAIVITILSVYMMYN 269


>gi|217978634|ref|YP_002362781.1| protein of unknown function DUF81 [Methylocella silvestris BL2]
 gi|217504010|gb|ACK51419.1| protein of unknown function DUF81 [Methylocella silvestris BL2]
          Length = 249

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 84/264 (31%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    L++   F +G +  + G GGGL+ +PVL     L G+D       A+ T+    +
Sbjct: 3   LTIFALLVATGFAAGFVDAIAG-GGGLLTLPVL----TLAGLDPVS----AIATNKLQGS 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +   + R G I    +     +     V  + +++H+   +L     +  +L+ +
Sbjct: 54  FGSGSAMRTYARAGHIRWSEVGLLAALAAAGAVAGAALVAHLPVDWLKAVLPVALVLIAV 113

Query: 140 LMLKRDRLY---CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
                 ++       +            + G   G  G G G F  L  +   G  + KA
Sbjct: 114 YFAFSPKISDLETHARMSVKAFTLTIIPLIGCYDGMFGPGAGSFYVLGFVELLGYGVVKA 173

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           TA +   +      AL     +            G V     L +         L    +
Sbjct: 174 TAHTKVANFSSNLAALATLAMT------------GHVWWILGLAMGVAQFFGARLGAHTA 221

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G   +      I    +   A
Sbjct: 222 IRNGAALIRPLLVTICLLIAARLA 245


>gi|212704214|ref|ZP_03312342.1| hypothetical protein DESPIG_02269 [Desulfovibrio piger ATCC 29098]
 gi|212672418|gb|EEB32901.1| hypothetical protein DESPIG_02269 [Desulfovibrio piger ATCC 29098]
          Length = 420

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 105/292 (35%), Gaps = 68/292 (23%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I     +G ++G  G GGG ++ P L        +   +   +A+GT L  I   ++M  
Sbjct: 81  IAVGLAAGLITGCIGAGGGFIITPAL--------MAAGVKGILAVGTDLFHIFAKAIMGT 132

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMIS-------HVDKSFLNKAFAIFCLLMGI 139
             H++ G +++K+   ++      T V   +          + + F++  +A+    +G 
Sbjct: 133 TVHKKLGNVSVKLAIAFLVGSGAGTFVGGAINKGLYNADPLLSEMFISTIYAVLLGFLGF 192

Query: 140 LML-----------------------------------------KRDRLYCERKFPDNYV 158
             L                                           + L    +    ++
Sbjct: 193 YALFDFLKATRGTQADSGDAHGGTAGMTGLSVKLQSLNVPPMITFDEDLVPGGRRISGWI 252

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
               G+V G L+  +GVGGG  T  + ++             GVS++      +++I   
Sbjct: 253 VAAGGVVVGMLAAIMGVGGGFVTFPMFVYI-----------FGVSSMTTVGTDILQIIFT 301

Query: 219 WGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            GL  +  +++ G+V     + +L  S+L   +    + ++   ++   +++
Sbjct: 302 AGLASVGQYAIYGYVFYTLAVGMLLGSLLGIQVGALTTKVVKGVHIRGFYAV 353



 Score = 45.1 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 43/113 (38%), Gaps = 8/113 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS- 82
            ++     + G L+ + GVGGG V  P+    F        +     +GT +  I  T+ 
Sbjct: 251 WIVAAGGVVVGMLAAIMGVGGGFVTFPMFVYIF-------GVSSMTTVGTDILQIIFTAG 303

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
           + S  ++  +G +   +    +    +   V +L    V    +   +A+  +
Sbjct: 304 LASVGQYAIYGYVFYTLAVGMLLGSLLGIQVGALTTKVVKGVHIRGFYAVSII 356


>gi|332766147|gb|EGJ96357.1| hypothetical protein SF293071_2845 [Shigella flexneri 2930-71]
          Length = 261

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 75/180 (41%), Gaps = 13/180 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 6   LLGVLFFVAMLAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ + +   R   +++   K  I +  + ++  +L++ +V    L +   I  + +G+  
Sbjct: 57  SISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYF 116

Query: 142 LKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L  E   R+        I G   GF  G  G   G F  L  ++  G ++ KATA
Sbjct: 117 LLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVMLCGFNLAKATA 176


>gi|167038325|ref|YP_001665903.1| hypothetical protein Teth39_1936 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|307267134|ref|ZP_07548644.1| protein of unknown function DUF81 [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|320116726|ref|YP_004186885.1| hypothetical protein Thebr_1983 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|326390245|ref|ZP_08211805.1| protein of unknown function DUF81 [Thermoanaerobacter ethanolicus
           JW 200]
 gi|166857159|gb|ABY95567.1| protein of unknown function DUF81 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|306917854|gb|EFN48118.1| protein of unknown function DUF81 [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|319929817|gb|ADV80502.1| protein of unknown function DUF81 [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|325993690|gb|EGD52122.1| protein of unknown function DUF81 [Thermoanaerobacter ethanolicus
           JW 200]
          Length = 253

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 98/267 (36%), Gaps = 29/267 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++YI  +    F +  +  + G GGG++ +P L       G+  +     A+GT+    +
Sbjct: 3   IEYIVALCGIGFAAAFIDSIAG-GGGIISLPGLLVL----GVPPAF----ALGTNKFAAS 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  S +   ++   +  +LK  +F   +  ++    +  +D S L     I  + + I
Sbjct: 54  CASFTSSLTFIKYRVYDGDLLKYLVFGTLLGAILGVKTVLLLDSSQLRIIIIILMMFVAI 113

Query: 140 LMLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIY 193
             L    +  E KF         +  I  ++ GF  G  G G G F   L +        
Sbjct: 114 YTLFVKNIGNENKFEGVNKKTIAIGLIISIILGFYDGFFGPGTGSFYIFLFLTLLNYDFK 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            +      ++ +    +L++    G  L     +S+        + +    IL   L TK
Sbjct: 174 ISAGNGKILNFVSNITSLIMFALHGKIL-----YSI-------AIPMALAMILGARLGTK 221

Query: 254 LSYMIGKKYLTIGFS--MIMFTTSFVF 278
           L+   G + +        +++    +F
Sbjct: 222 LAIKNGARLIRPILISVTLLYAVKMIF 248


>gi|332184497|gb|AEE26751.1| hypothetical protein FN3523_1448 [Francisella cf. novicida 3523]
          Length = 249

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 99/261 (37%), Gaps = 28/261 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +IV  F+ G   GL G GG ++ VP+L+           +  H A+  SL V+  T++
Sbjct: 1   MFLIVFGFICGIALGLTGGGGSILAVPLLTY-------GVGLDFHSAVTISLLVVGFTAI 53

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + + +   I+       I    +   + + +   +    L  +F+I  +L+G+  L 
Sbjct: 54  FGLVVNYKQHDIHYIAAAVMIVTGVVFAPIGNYISQGLSDKLLMLSFSILMILIGVWSLI 113

Query: 144 RDRLYC--------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYK 194
           + +L                     I G V G L+G  GVGGG      ++F     + +
Sbjct: 114 KAKLISNSGKSVCKSIGPRCIVALLISGGVVGTLTGFFGVGGGFLIVPALVFITAMPLKR 173

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A  TS  V  +++    +      +    +        N     + +  S +   LATK+
Sbjct: 174 AINTSLLVIFVVSISGFISH----YDETSM--------NWYIASMFIVGSAIGMLLATKV 221

Query: 255 SYMIGKKYLTIGFSMIMFTTS 275
              +  K L   F++++    
Sbjct: 222 KKSLNDKVLQTIFAVMLVVLG 242



 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 7/121 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++++  + GTL+G FGVGGG ++VP L           ++ +  A+ TSL VI   S
Sbjct: 134 IVALLISGGVVGTLTGFFGVGGGFLIVPALVFI-------TAMPLKRAINTSLLVIFVVS 186

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +  F+ H    ++N  I   +I    I  ++ + +   ++   L   FA+  +++G+ + 
Sbjct: 187 ISGFISHYDETSMNWYIASMFIVGSAIGMLLATKVKKSLNDKVLQTIFAVMLVVLGVGLY 246

Query: 143 K 143
            
Sbjct: 247 F 247


>gi|229100273|ref|ZP_04231164.1| hypothetical protein bcere0020_54700 [Bacillus cereus Rock3-29]
 gi|229119059|ref|ZP_04248399.1| hypothetical protein bcere0017_53180 [Bacillus cereus Rock1-3]
 gi|228664388|gb|EEL19889.1| hypothetical protein bcere0017_53180 [Bacillus cereus Rock1-3]
 gi|228683168|gb|EEL37155.1| hypothetical protein bcere0020_54700 [Bacillus cereus Rock3-29]
          Length = 252

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 106/265 (40%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  ++ + L+ + + L+G +  + G GGG++ +PV+            +   VA+ T+  
Sbjct: 2   DFTIELLILLFLVAILAGWIDTIAG-GGGMITIPVMLLV--------GMSPSVAIATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  ++M+ +   +   IN+K ++  I +    +++   +I  +   +L        ++
Sbjct: 53  QGSSGTLMATVIFIKKKEINLKEMRLSILMTFFGSILGGWLILQIRAEYLIMILPFLLII 112

Query: 137 MGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           +G+  L    +  E   RK              GF  G  G G G    L  +L  G S 
Sbjct: 113 IGLYFLLSPNIANEDRPRKISMLLFALTVAPFLGFYDGFFGPGTGSLIALAFILLCGYSA 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++    F ALL  I  G        W++G       LI++   I+ + +  
Sbjct: 173 TRATANAKILNFTSNFAALLYFIIFGQ-----IDWTIG-------LIMMLGQIIGSYIGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           K+    G   +     ++ F  +  
Sbjct: 221 KMVLTKGTSLIRPIVVIVCFVMAIK 245


>gi|121296528|gb|ABM53762.1| putative permease [Stenotrophomonas maltophilia]
          Length = 253

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 82/239 (34%), Gaps = 22/239 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI-APTSV 83
             I+    +  + G  G+  GLV     S     MG+  +     A+  S+      T+ 
Sbjct: 9   WFILIGLGAQLVDGALGMAFGLVS----SSVMLSMGLPPA-----AVSASVHTAEVFTTG 59

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + H   G ++ ++         +  V+ + +++ +    +      + L++ + +L 
Sbjct: 60  ASGVSHLVAGNVDKRLFLRLALPGAVGGVLGAYVLTQLPGDAIRPFIYGYLLILAVFILL 119

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
           R       +     V  + G V G L  + G G G      +L  G        T     
Sbjct: 120 RAAGKLVPRQEVKRVP-VLGFVAGLLDASGGGGWGPVATSTLLARGGQARTTIGTVNAAE 178

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
            ++     +  +            S+G   +  V  +L   ++  PLA  L   + +++
Sbjct: 179 FVVTLAVSITFLL-----------SMGLQYLNIVAGLLIGGMMAAPLAAVLVKRVKERW 226


>gi|46578667|ref|YP_009475.1| hypothetical protein DVU0251 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46448078|gb|AAS94734.1| membrane protein, putative [Desulfovibrio vulgaris str.
           Hildenborough]
          Length = 320

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 54/122 (44%), Gaps = 8/122 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +V   +   ++   GVGGG ++VP L+           + M++A GTS   +  + +
Sbjct: 197 ILPVVGGIVISAIAAFLGVGGGFLLVPFLTSI-------SELPMYLAAGTSALAVLVSMI 249

Query: 84  MSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            S +     GT ++  ++   +  + I +++      +   + L + F +  L +GI  +
Sbjct: 250 TSIITLVSKGTPLDWTLIGTELVGIVIGSIIGPRTSKYFSDTLLKRIFIVLALYVGIDYV 309

Query: 143 KR 144
            R
Sbjct: 310 LR 311



 Score = 42.4 bits (99), Expect = 0.068,   Method: Composition-based stats.
 Identities = 31/248 (12%), Positives = 68/248 (27%), Gaps = 63/248 (25%)

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMGI 139
           + ++S   + R G + + +         I    ++      V  S     F +F L++G+
Sbjct: 70  SGLISSFNYYRMGRLVLPLAVALGAGSIIGAWASAYFTAGKVSFSSYQGYFGLFVLVLGL 129

Query: 140 LMLKRDRLYCERKFP--------------------------------------------- 154
            +        +                                                 
Sbjct: 130 YLFWETSPAGQAHKKKAKEAAKAFEEAVKKQKSGEKIDESAIGVKVKAFTMSRCVFTFSG 189

Query: 155 -----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAF 208
                +  +  + G+V   ++  LGVGGG      +       +Y A  TSA    +   
Sbjct: 190 VEFSFNPILPVVGGIVISAIAAFLGVGGGFLLVPFLTSISELPMYLAAGTSALAVLVSMI 249

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            +++  +  G  L+     +        ++ I+  SI    +  + S       L   F 
Sbjct: 250 TSIITLVSKGTPLDWTLIGT-------ELVGIVIGSI----IGPRTSKYFSDTLLKRIFI 298

Query: 269 MIMFTTSF 276
           ++      
Sbjct: 299 VLALYVGI 306


>gi|86151886|ref|ZP_01070099.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|121612274|ref|YP_001001118.1| hypothetical protein CJJ81176_1462 [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|315124904|ref|YP_004066908.1| hypothetical protein ICDCCJ07001_1400 [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85840994|gb|EAQ58243.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|87249975|gb|EAQ72934.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|315018626|gb|ADT66719.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 254

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 92/263 (34%), Gaps = 28/263 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y  ++   +  +G +  + G GGGL+ +P L            I  H+++ T+       
Sbjct: 10  YYFILFFVALFAGFIDSIVG-GGGLITLPALIAC--------GIPAHLSLATNKLQSVFG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + + + +  T  +  L   +F   +   + S  +  V    L     IF  L  +  
Sbjct: 61  SFTATLTYFKSTT--LPHLAWGVFFTALGAAIGSYSVLFVKDEQLKLIILIFLTLTFLYT 118

Query: 142 LKRDRLYCERKFPD----NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
             R  L      P          I G+  GF  G LG G G F     +   G ++ KA 
Sbjct: 119 ALRPNLGKHESEPKIKNIKIFHLICGLTLGFYDGFLGPGTGSFWIFACVMLLGFNMRKA- 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S     L     ++      W    L  W++G       L++    +L   L +KL  
Sbjct: 178 --SINTKILNFTSNIIALAIFLWQYELL--WAVG-------LLMGVGQVLGAYLGSKLVL 226

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
               K++   F +++  T    A
Sbjct: 227 KTNGKFIKTLFLIVVGATIIKVA 249


>gi|159026407|emb|CAO88936.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 298

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 7/101 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
             +VP L            I M  A+ TSL +I   SV   + +  H +++ ++   + F
Sbjct: 172 FAIVPALVLL-------GKIPMVQAIATSLLIIFLNSVAGLLGYLGHISVDWQLTLSFAF 224

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
              + T++ S +   V    L K F  F L + +L+L ++R
Sbjct: 225 AAALGTLIGSYLGQFVSAKQLQKGFGYFLLAIAVLVLIQNR 265



 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 74/247 (29%), Gaps = 40/247 (16%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L            +    A+  +L VI   S++  + H + G IN+K    +     +
Sbjct: 30  PILVYVM-------GVPTKSAIAMTLLVIGSVSLLGTIPHWKKGNINLKTAFIFGSATMV 82

Query: 110 TTVVTSLMIS--HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY---------- 157
              + + + +   V  +F    FA   ++    M+ R        +              
Sbjct: 83  GAFLGARLATLPFVTATFQMLLFATLMVVAAAFMISRSTQIDNPDYKARDRQKNLTLYPQ 142

Query: 158 ------VKYIWGMVTGFLSGALGVGGG---IFTNLLMLFYGASIYKATATSAGVSALIAF 208
                   ++             VG G        L+L     + +A ATS  +  L + 
Sbjct: 143 PVCRYCWLWLMSEGIAVGVLTGLVGVGGGFAIVPALVLLGKIPMVQAIATSLLIIFLNSV 202

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
             LL  +                V+    L     + L T + + L   +  K L  GF 
Sbjct: 203 AGLLGYLGHIS------------VDWQLTLSFAFAAALGTLIGSYLGQFVSAKQLQKGFG 250

Query: 269 MIMFTTS 275
             +   +
Sbjct: 251 YFLLAIA 257


>gi|300689812|ref|YP_003750807.1| hypothetical protein RPSI07_0107 [Ralstonia solanacearum PSI07]
 gi|299076872|emb|CBJ49485.1| conserved membrane protein of unknown function, DUF81 [Ralstonia
           solanacearum PSI07]
          Length = 252

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 98/263 (37%), Gaps = 25/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L+ VA FL+G +  + G GGGLV +P L  A+       ++     +GT+       +
Sbjct: 3   FVLLAVAGFLAGLIDAVAG-GGGLVQIPALFSAY------PNLAPATLIGTNKVASMSGT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + + + R   I        +    + +++ +  ++H+    L +A      ++ +  +
Sbjct: 56  ATAAVRYGRTVRIYWGATAPAVVTAFLCSLLGAWALTHIPAEPLRRALPFVLAVLLVYTV 115

Query: 143 KRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +  L  +         +  V  + G + GF  G  G G G     + +  +G     A+
Sbjct: 116 AKKDLGADHAPSLAGWRERAVALLAGAILGFYDGVFGPGTGSFLMIVFVRVFGYDFLHAS 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A++  V+      ALL+                G V     L++   ++L     + L+ 
Sbjct: 176 ASTKIVNLATNVAALLLLAAK------------GHVWWELGLVMAVANVLGNQAGSHLAL 223

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G +++   F  ++       A
Sbjct: 224 KHGSRFVRKVFIAVVLALILKTA 246


>gi|229190456|ref|ZP_04317455.1| hypothetical protein bcere0002_21230 [Bacillus cereus ATCC 10876]
 gi|228593005|gb|EEK50825.1| hypothetical protein bcere0002_21230 [Bacillus cereus ATCC 10876]
          Length = 252

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 106/265 (40%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  ++ + L+ + + L+G +  + G GGG++ +P++            +   VA+ T+  
Sbjct: 2   DFTIELLILLFLVAVLAGWVDTIAG-GGGMITIPIMLLV--------GMSPSVAIATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  ++M+ +   +   IN+K ++  I +    +V+   ++  +   +L        + 
Sbjct: 53  QGSSGTLMATVFFIKKKEINLKEMRLSILMTFFGSVLGGWLVLQIRAEYLIMILPFLLVF 112

Query: 137 MGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           +GI  L    +  E   RK            + GF  G  G G G    L  +L  G S 
Sbjct: 113 IGIYFLLSPNIANEDRPRKISMLLFALTVAPLLGFYDGFFGPGTGSLIALAFILLCGYSA 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++    F ALL  I  G        W++G       LI++   I+ + +  
Sbjct: 173 TRATANAKILNFTSNFAALLYFIIFGQ-----IDWTIG-------LIMMLGQIIGSYIGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           K+    G   +     ++ F  +  
Sbjct: 221 KMVLTKGTALIRPIVVIVCFVMAIK 245


>gi|119356263|ref|YP_910907.1| hypothetical protein Cpha266_0425 [Chlorobium phaeobacteroides DSM
           266]
 gi|119353612|gb|ABL64483.1| conserved hypothetical protein [Chlorobium phaeobacteroides DSM
           266]
          Length = 121

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPT 81
             ++ +     G L+G+FGVGGG+++VPVL            +  H A  TSL  ++ P 
Sbjct: 3   FMIMFITGIAGGILAGMFGVGGGIIIVPVLVLLV-------GMTQHSASATSLVALLLPV 55

Query: 82  SVMSFMEHRRHGTINMKILK---DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            ++  ME+ R G I  + L         L I     + +   +    L KAFA+F  ++ 
Sbjct: 56  GILGVMEYYRSGRITTEHLWFGLIIALGLFIGAYFGAKIAISLSSDTLRKAFAVFTGIVA 115

Query: 139 ILMLKR 144
             +  +
Sbjct: 116 FRLWFK 121



 Score = 43.9 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 47/122 (38%), Gaps = 11/122 (9%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATS-AGVSALIAFPALLVRI 215
           + +I G+  G L+G  GVGGGI    +++   G + + A+ATS   +   +    ++   
Sbjct: 5   IMFITGIAGGILAGMFGVGGGIIIVPVLVLLVGMTQHSASATSLVALLLPVGILGVMEYY 64

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            SG        + L         II     +      K++  +    L   F++     +
Sbjct: 65  RSGRITTEHLWFGL---------IIALGLFIGAYFGAKIAISLSSDTLRKAFAVFTGIVA 115

Query: 276 FV 277
           F 
Sbjct: 116 FR 117


>gi|298530781|ref|ZP_07018183.1| protein of unknown function DUF81 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298510155|gb|EFI34059.1| protein of unknown function DUF81 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 395

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 52/117 (44%), Gaps = 8/117 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+  F+   ++   GVGGG ++VP ++           + M++A GTS   +    + + 
Sbjct: 269 ILGGFVIAAIAAFLGVGGGFMLVPFITAV-------AGLPMYLAAGTSALAVLVGMITAI 321

Query: 87  MEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +   G  ++  ++   +  + I +++      ++ +  L + F +    +GI  +
Sbjct: 322 LSYLAAGVLVHWSLIGTQLVGIFIGSMIGPRTSQYIPEKVLTRIFIVLAFYVGINYI 378



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 12/125 (9%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLV 213
           +     + G V   ++  LGVGGG      +    G  +Y A  TSA    +    A+L 
Sbjct: 264 NPLFPILGGFVIAAIAAFLGVGGGFMLVPFITAVAGLPMYLAAGTSALAVLVGMITAILS 323

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            + +G     L  WSL       ++ I   S+    +  + S  I +K LT  F ++ F 
Sbjct: 324 YLAAGV----LVHWSL---IGTQLVGIFIGSM----IGPRTSQYIPEKVLTRIFIVLAFY 372

Query: 274 TSFVF 278
               +
Sbjct: 373 VGINY 377


>gi|27376600|ref|NP_768129.1| hypothetical protein bll1489 [Bradyrhizobium japonicum USDA 110]
 gi|27349741|dbj|BAC46754.1| bll1489 [Bradyrhizobium japonicum USDA 110]
          Length = 274

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 97/267 (36%), Gaps = 35/267 (13%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L + + F  G L G+ GVGGG +M P+L   F   G+  S     A+GT L   A T   
Sbjct: 5   LYVASGFGVGLLVGMTGVGGGSLMTPLLILLF---GVHPST----AVGTDLLYAAATKTG 57

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM-- 137
             + H    +++   +          + +T L++  +D     +  L      F LL+  
Sbjct: 58  GSVVHGWSRSVHWPAVLRLACGSLPASALTLLVLWQLDLRSDAERSLVNLVLCFALLLTA 117

Query: 138 -------GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-- 188
                   I+   R +     +        + G+V G L     VG G     ++L    
Sbjct: 118 TSLIFRKAIMERYRRKRERVDERTTAIATVVTGIVLGVLVSISSVGAGAVGVTVLLLLYP 177

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
              +     +    +  +   A +              W+LG V+ G + ++L  S+   
Sbjct: 178 RLPMATIVGSDIAHAVPLTLVAGIG------------HWALGDVDWGLMGVLLLGSLPGI 225

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTS 275
            + +  +  + +  L +  + ++F  +
Sbjct: 226 IVGSFSATRVPETVLRLTLASVLFVVA 252



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 46/117 (39%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +V   + G L  +  VG G V V VL   +        + M   +G+ +    P ++++ 
Sbjct: 147 VVTGIVLGVLVSISSVGAGAVGVTVLLLLY------PRLPMATIVGSDIAHAVPLTLVAG 200

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + H   G ++  ++   +       +V S   + V ++ L    A    ++   ++ 
Sbjct: 201 IGHWALGDVDWGLMGVLLLGSLPGIIVGSFSATRVPETVLRLTLASVLFVVASKIMF 257



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 48/131 (36%), Gaps = 21/131 (16%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRI 215
            +    G   G L G  GVGGG     L+ L +G     A  T    +A          +
Sbjct: 4   PLYVASGFGVGLLVGMTGVGGGSLMTPLLILLFGVHPSTAVGTDLLYAAATKTGGS---V 60

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY--------LTIGF 267
             GW  +         V+  AVL +   S+  + L   + + +  +         L + F
Sbjct: 61  VHGWSRS---------VHWPAVLRLACGSLPASALTLLVLWQLDLRSDAERSLVNLVLCF 111

Query: 268 SMIMFTTSFVF 278
           ++++  TS +F
Sbjct: 112 ALLLTATSLIF 122


>gi|323495418|ref|ZP_08100495.1| putative permease [Vibrio brasiliensis LMG 20546]
 gi|323310341|gb|EGA63528.1| putative permease [Vibrio brasiliensis LMG 20546]
          Length = 251

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 94/259 (36%), Gaps = 26/259 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + + S ++ TL+ L G G GL+  P+L            +   +A+ T         V +
Sbjct: 9   LFIGSLIANTLASLSGGGAGLLQFPLLIFF--------GLPFSIALATHKIASVALGVGA 60

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM---- 141
              H +    + ++    + V  I  ++ + ++  +          +  L +GI      
Sbjct: 61  AYTHIKQKNFSYQVALYLVLVGSIGVIIGANIVLLIPDQIAETLLGLMILALGIYSRFKP 120

Query: 142 -LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA-T 198
            L +  L   R +    +  +  M+ G ++G+L  G G+   L ++ ++G S  +A A T
Sbjct: 121 QLGQQDLMLNRHYKGWAIGGVGLMLIGVINGSLTAGSGLLVTLFLVRWFGYSYKQAVALT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
              V         +  + +G             V    +  ++  S L   L   ++  +
Sbjct: 181 MLCVGLFWNGIGGIAMVQAGAP-----------VYWPWLPALVLGSFLGGGLGAYMTTRV 229

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             + + + F ++ F     
Sbjct: 230 NNQVIKVCFEILTFAVGIK 248


>gi|253315111|ref|ZP_04838324.1| hypothetical protein SauraC_02863 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
          Length = 249

 Score = 58.5 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I +II+  F++  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   LTMIIIIILFGFIAAFIDSVVG-GGGLISTPALLAI--------GLPPSVALGTNKLASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+ S ++  R G +++ ++      + + +   + + + V    L     I    + I
Sbjct: 56  FGSLTSMIKFIRSGKVDLFVVAKLFGFVFLASACGAYIATMVPSQILKPLIIIALSSVFI 115

Query: 140 LMLKRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             L +      R      F    +     ++ GF  G +G G G F   ++L +G     
Sbjct: 116 FTLLKKDWGNTRTFTQFTFKKAIIFAALFILIGFYDGFVGGGTGSFMLFVLLVFGFDFLS 175

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A   +  ++      AL++ +  G
Sbjct: 176 AAGNAKVLNFASNIGALVLFMVLG 199


>gi|323705754|ref|ZP_08117327.1| protein of unknown function DUF81 [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323534972|gb|EGB24750.1| protein of unknown function DUF81 [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 252

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 93/265 (35%), Gaps = 27/265 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + Y+  + V  F++  +  + G GGG++ +P L       G+  +     A+GT+     
Sbjct: 3   LKYVLSLCVIGFIAAFIDSIAG-GGGIISLPGLMVL----GVPPAY----ALGTNKFAST 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  S M   ++   ++ +LK  +F   I  ++    +  +D S L     I  + + I
Sbjct: 54  CASFTSSMTFIKYKVYDINLLKYLVFGTLIGAILGVKAVLSLDSSKLRIIIIILMIFVAI 113

Query: 140 LMLKRDRLYCERKFPDN-----YVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIY 193
             L    +     F         +  I  +V GF  G  G G G F   L ++  G    
Sbjct: 114 YTLLSKNVGSVNNFEGVNKKTIAIGLIISIVLGFYDGFFGPGTGSFYIFLFIILLGYDFR 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            +      ++ +    +L++   S              +   A + +    I+     TK
Sbjct: 174 ISAGNGKILNFVSNVTSLVLFAISSK------------IIYSAAIPMAIAMIVGARFGTK 221

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++   G K +      +    +   
Sbjct: 222 VAIKNGAKLIRPILICVAIAYAIKM 246


>gi|307294473|ref|ZP_07574315.1| protein of unknown function DUF81 [Sphingobium chlorophenolicum
           L-1]
 gi|306878947|gb|EFN10165.1| protein of unknown function DUF81 [Sphingobium chlorophenolicum
           L-1]
          Length = 259

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 93/261 (35%), Gaps = 24/261 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + I  ++ A+ ++G +  + G GGGL+ +P L        +   I    A+ T+    + 
Sbjct: 6   ETIAFLMAAALVAGCIDAMAG-GGGLIALPAL--------MAAGIPPVAAVATNKLQSSL 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  + + + R G +++K  +  IF     +V  + ++  VD S L        + +   
Sbjct: 57  GTFGACVAYARAGHMDLKAYRWPIFAAFAGSVGGAWLVQRVDPSILAGLMPALLIALAAY 116

Query: 141 MLKRDRLYC--ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATA 197
                ++     R+        +     GF  G  G G G F  ++ +   G  + +ATA
Sbjct: 117 FTFSPKVGEMDRRQRVGMAALSLLVGAVGFYDGFFGPGAGAFYASIFVALGGLGLVRATA 176

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +   +       LL  I              G V     L +   SI    + ++L+  
Sbjct: 177 QTKAANLASNLAGLLTMIVG------------GHVIWIVGLAMAVGSITGGQIGSRLAMR 224

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
            G + +      +    +   
Sbjct: 225 FGSRLIRPLLIALSLALTAKM 245


>gi|297567165|ref|YP_003686137.1| hypothetical protein Mesil_2784 [Meiothermus silvanus DSM 9946]
 gi|296851614|gb|ADH64629.1| protein of unknown function DUF81 [Meiothermus silvanus DSM 9946]
          Length = 119

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 8/125 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA-P 80
           ++ L  +    +G LSGLFG+GGG+++VP L     L           A GTSL  +  P
Sbjct: 2   HLLLSALIGLSAGLLSGLFGIGGGVIVVPALIFLLGLD-------QRTATGTSLAALLLP 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             ++  + + R G +   +       L + T   + +   + +  L    A+  + + + 
Sbjct: 55  VGILGVLAYAREGAVRWPVAALIALGLLLGTFFGARLAWQLPEGALRVGLALLLIGVALH 114

Query: 141 MLKRD 145
           +L R 
Sbjct: 115 LLLRR 119



 Score = 43.5 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 14/122 (11%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATS-AGVSALIAFPALLVR 214
            +  + G+  G LSG  G+GGG+     ++F  G     AT TS A +   +    +L  
Sbjct: 4   LLSALIGLSAGLLSGLFGIGGGVIVVPALIFLLGLDQRTATGTSLAALLLPVGILGVLAY 63

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                          G V      +I    +L T    +L++ + +  L +G ++++   
Sbjct: 64  ARE------------GAVRWPVAALIALGLLLGTFFGARLAWQLPEGALRVGLALLLIGV 111

Query: 275 SF 276
           + 
Sbjct: 112 AL 113


>gi|295697041|ref|YP_003590279.1| protein of unknown function DUF81 [Bacillus tusciae DSM 2912]
 gi|295412643|gb|ADG07135.1| protein of unknown function DUF81 [Bacillus tusciae DSM 2912]
          Length = 260

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 101/263 (38%), Gaps = 18/263 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ +  +IV   +   LSG+ G+GG +V  P++     ++G+      H   G     + 
Sbjct: 3   IELVATLIVIGVIGALLSGMLGIGGAIVNYPMILYIPPMLGL-PGYSPHEVAGIVALQVL 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +++   +  R    I+ +++      + + + V       +  + +N  +AI      I
Sbjct: 62  FSTLSGVIAQRGDNVIHRQLVLIMGISVLVGSFVGGYGAKFLSGNIVNIIYAILATAAAI 121

Query: 140 LMLKRDRLYCERKF----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYK 194
           LM    R   +        +  +  +  +  G  +G +G GG      +ML         
Sbjct: 122 LMSLPKRGSEDLALHEIEFNKTMAVVSSLTVGLAAGIVGAGGAFLLVPVMLQILKIPTRV 181

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             A+S  ++ L +  + + ++ +            G +   A  I++  S+++ PL  K+
Sbjct: 182 TIASSLAITFLSSIGSSVGKVLA------------GDIPWTAAAIVVVASVIVAPLGVKV 229

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
             MI  + L     +++   +  
Sbjct: 230 GRMIDVRVLRAVLGVVIIAVTVK 252


>gi|209526288|ref|ZP_03274817.1| protein of unknown function DUF81 [Arthrospira maxima CS-328]
 gi|209493217|gb|EDZ93543.1| protein of unknown function DUF81 [Arthrospira maxima CS-328]
          Length = 254

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 77/237 (32%), Gaps = 29/237 (12%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL            I    A+  SL ++   S++  + H R G +N K    +     
Sbjct: 30  VPVLVYIM-------GIGTREAIAMSLAIVGSVSLLGMLPHWRRGNVNFKTFAVFTPTAM 82

Query: 109 ITTVVTSLMISH--VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP------DNYVKY 160
           +     + + S   +  +    +F    LL  ILM+ R     +   P        +   
Sbjct: 83  VGAYFGARLASFPGITDTIQMVSFGAIALLASILMISRSNHVPKAVSPSVGKDNSRWWLI 142

Query: 161 IWGMVTGFLSGALGVGGGIF--TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             G +   +       GG F    +L+L  G  I +A  TS  +    +   ++  +   
Sbjct: 143 PLGGLGVGVITGFVGVGGGFAIVPVLVLLGGIPIKEAIGTSLLIITFNSIAGIIGYL--- 199

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                +P      +N      +   + L T     L+  I  K L   F   +   +
Sbjct: 200 ---GQVP------INWSLTFSMTIAASLGTLGGAYLNQFIDGKRLQKFFGFFVLGIA 247



 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 7/99 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
             +VPVL            I +  A+GTSL +I   S+   + +     IN  +      
Sbjct: 162 FAIVPVLVLL-------GGIPIKEAIGTSLLIITFNSIAGIIGYLGQVPINWSLTFSMTI 214

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              + T+  + +   +D   L K F  F L +  ++L +
Sbjct: 215 AASLGTLGGAYLNQFIDGKRLQKFFGFFVLGIATVVLLQ 253


>gi|148652180|ref|YP_001279273.1| hypothetical protein PsycPRwf_0368 [Psychrobacter sp. PRwf-1]
 gi|148571264|gb|ABQ93323.1| protein of unknown function DUF81 [Psychrobacter sp. PRwf-1]
          Length = 254

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 86/212 (40%), Gaps = 13/212 (6%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M F+     ++ I ++   + ++G +  + G GGGL+ +P +  A        +I   + 
Sbjct: 1   MSFMDFSLTLEVILMLTAVAAVAGFIDAIAG-GGGLLTIPAMLLA--------NIPPVMT 51

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+    A  ++ + +   + G +    +K  I      +V+ ++ +       L K  
Sbjct: 52  LGTNKLQAASGALTASITMIKKGVVKPATMKMAIAGAFFGSVLGTIAVQMSPPDMLEKII 111

Query: 131 AIFCLLMGILMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LML 186
                 +GI  L    L     E +  +   + +   + GF  G +G G G+F  L  + 
Sbjct: 112 PFLIAAIGIYTLFAPSLGDVEAEPRIKETTWQRVVAPLIGFYDGYVGPGTGMFFALGNVA 171

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             G +I  AT T+  ++      +L+  I  G
Sbjct: 172 LRGRAIIAATGTAKVLNLSTNIASLIFFILGG 203


>gi|134100066|ref|YP_001105727.1| membrane protein, putative (partial match) [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133912689|emb|CAM02802.1| membrane protein, putative (partial match) [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 290

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 86/262 (32%), Gaps = 31/262 (11%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
               L+G L GL G+GGG + +P+L+  F   G+        A+ T L   A T  +   
Sbjct: 7   ATGLLTGVLVGLTGMGGGALAMPLLTLVF---GVPPLA----AVSTDLVASAVTKPIGAA 59

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS---FLNKAFAIFCLLMGILMLKR 144
            H R  T++++++            V S++   + +     L        ++    +  R
Sbjct: 60  VHLRRRTVDLRLVGLLCLGSLPCAAVGSVLAGTLGERTQDVLRIVAGAAVVVAAGTLFVR 119

Query: 145 ---DRLYCERKFPDNYVKYIWGMVTGFLSGA------LGVGGGIFTNLLMLFYGASIYKA 195
              DR            + +  +  G ++G       +G G  +   LL+L       + 
Sbjct: 120 MYLDRTRAPDPPEHPRARPVATVALGAVAGLVVGTTSVGSGSIVIVCLLLLQRRLPSARL 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T    +  +   A    +  G    GL            V  +L  S+        LS
Sbjct: 180 VGTDLAQAVPLVLVAAGGHLLVGDVEFGL------------VASLLAGSVPGVLAGAVLS 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
                  + +    ++  T  V
Sbjct: 228 ARTPDVPIRVALGTMLILTGLV 249



 Score = 35.4 bits (81), Expect = 8.2,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 43/116 (37%), Gaps = 6/116 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +    ++G + G   VG G +   V+     L     S  +   +GT L    P  +++ 
Sbjct: 142 VALGAVAGLVVGTTSVGSGSI---VIVCLLLLQRRLPSARL---VGTDLAQAVPLVLVAA 195

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             H   G +   ++   +       +  +++ +      +  A     +L G+++L
Sbjct: 196 GGHLLVGDVEFGLVASLLAGSVPGVLAGAVLSARTPDVPIRVALGTMLILTGLVLL 251


>gi|219850511|ref|YP_002464944.1| hypothetical protein Cagg_3672 [Chloroflexus aggregans DSM 9485]
 gi|219544770|gb|ACL26508.1| protein of unknown function DUF81 [Chloroflexus aggregans DSM 9485]
          Length = 251

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 69/199 (34%), Gaps = 11/199 (5%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  ++ +  F    LSG+ G+G   +  PVL       G+      H  M  SL +   T
Sbjct: 2   FYLILTILLFGLSFLSGMMGLGVAFIATPVL-------GLFGLELKHEIMPLSLWLNGIT 54

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++   +   R G ++ +     + +  I   +   ++  V  + +   +    + +   M
Sbjct: 55  AIAGAVTLARKGMVDWRTALPLLIITTIVAPIGVWLLQFVPTTTVWWIYVGVLVFLAYRM 114

Query: 142 LKRDRLYCERKFP----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
                    +                   G  +G LGVG G      ++  G +   A A
Sbjct: 115 AFPPTQDDSQPTVISDATRVKAGFASAAIGVFAGFLGVGPGFLLMPTLVLLGYTARIAAA 174

Query: 198 TSAGVSALIAFPALLVRIY 216
           T+A +  L +F A    + 
Sbjct: 175 TNAVIVTLPSFSAFATHLL 193


>gi|300724330|ref|YP_003713648.1| hypothetical protein XNC1_3496 [Xenorhabdus nematophila ATCC 19061]
 gi|297630865|emb|CBJ91536.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061]
          Length = 260

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 98/268 (36%), Gaps = 37/268 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
              A  L+G   GL GVGGG +M P+L   F        +    A+ T L   + T ++ 
Sbjct: 6   YTFAGALTGLFIGLTGVGGGALMTPILLLFF-------GVSPTTAIATDLWFASITKIIG 58

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLM------ISHVDKSFLNKAFAIFCLLMGI 139
              H+  G ++  ++K          ++  L+      I+ +D      +F +    +G+
Sbjct: 59  ARVHQTAGNVDWTVVKRLWCGSLPVALLVVLLVNNGVHIARIDWLTEAISFVVLITAVGL 118

Query: 140 LMLKRDRLYCERKFPDNYVKY---------IWGMVTGFLSGALGVGGGIFTNLLMLF--- 187
           L+  R             V++         I G + G       VG G   ++++L+   
Sbjct: 119 LLAPRLTSIARNHRIGKPVRFKATQPAFTVIAGALLGLCVALTSVGAGALGSVMLLYLYP 178

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                ++  AT    +  +A  A +  + +G    G+            +  +L  SI  
Sbjct: 179 LRMVPHRLVATDIVHAIPLAMVAGIGYLLAGKVDGGM------------LASLLVGSIPS 226

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             + + L+     + +    S+++  ++
Sbjct: 227 VLIGSMLAGKFSGRKIQYLLSLVLIASA 254


>gi|228943197|ref|ZP_04105665.1| hypothetical protein bthur0008_57840 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228975978|ref|ZP_04136498.1| hypothetical protein bthur0003_57030 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228979107|ref|ZP_04139455.1| hypothetical protein bthur0002_22950 [Bacillus thuringiensis Bt407]
 gi|228780633|gb|EEM28852.1| hypothetical protein bthur0002_22950 [Bacillus thuringiensis Bt407]
 gi|228783735|gb|EEM31794.1| hypothetical protein bthur0003_57030 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228816476|gb|EEM62633.1| hypothetical protein bthur0008_57840 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 252

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 106/265 (40%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  ++ + L+ + + L+G +  + G GGG++ +P++            +   VA+ T+  
Sbjct: 2   DFTIELLILLFLVAVLAGWIDTIAG-GGGMITIPIMLLV--------GMSPSVAIATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  ++M+ M   +   IN+K ++  I +  + +V    ++  +   +L        ++
Sbjct: 53  QGSSGTLMATMIFIKKKEINLKDMRLSILMTFLGSVFGGWLVLQIRAEYLIMILPFLLII 112

Query: 137 MGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           +G+  L    +  E   RK              GF  G  G G G    L  +L  G S 
Sbjct: 113 IGLYFLLSPNIANEDRPRKISMLLFALTVAPFLGFYDGFFGPGTGSLIALAFILLCGYSA 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++    F ALL  I  G        W++G       LI++   I+ + +  
Sbjct: 173 TRATANAKILNFTSNFAALLYFIIFGQ-----IDWTIG-------LIMMLGQIIGSYIGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           K+    G   +     ++ F  +  
Sbjct: 221 KMVLTKGTALIRPIVVIVCFVMAIK 245


>gi|148984245|ref|ZP_01817540.1| hypothetical protein CGSSp3BS71_03452 [Streptococcus pneumoniae
           SP3-BS71]
 gi|149013586|ref|ZP_01834175.1| hypothetical protein CGSSp19BS75_12173 [Streptococcus pneumoniae
           SP19-BS75]
 gi|149020873|ref|ZP_01835402.1| hypothetical protein CGSSp23BS72_02509 [Streptococcus pneumoniae
           SP23-BS72]
 gi|221232542|ref|YP_002511696.1| hypothetical protein SPN23F_18180 [Streptococcus pneumoniae ATCC
           700669]
 gi|225855237|ref|YP_002736749.1| domain of unknown function, putative [Streptococcus pneumoniae JJA]
 gi|303254683|ref|ZP_07340785.1| hypothetical protein CGSSpBS455_04426 [Streptococcus pneumoniae
           BS455]
 gi|303258746|ref|ZP_07344726.1| hypothetical protein CGSSp9vBS293_06444 [Streptococcus pneumoniae
           SP-BS293]
 gi|303261910|ref|ZP_07347856.1| hypothetical protein CGSSp14BS292_10869 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303263772|ref|ZP_07349694.1| hypothetical protein CGSSpBS397_08164 [Streptococcus pneumoniae
           BS397]
 gi|303265693|ref|ZP_07351592.1| hypothetical protein CGSSpBS457_09625 [Streptococcus pneumoniae
           BS457]
 gi|303268604|ref|ZP_07354396.1| hypothetical protein CGSSpBS458_09831 [Streptococcus pneumoniae
           BS458]
 gi|147762818|gb|EDK69772.1| hypothetical protein CGSSp19BS75_12173 [Streptococcus pneumoniae
           SP19-BS75]
 gi|147923534|gb|EDK74647.1| hypothetical protein CGSSp3BS71_03452 [Streptococcus pneumoniae
           SP3-BS71]
 gi|147930514|gb|EDK81497.1| hypothetical protein CGSSp23BS72_02509 [Streptococcus pneumoniae
           SP23-BS72]
 gi|220675004|emb|CAR69582.1| putative membrane protein [Streptococcus pneumoniae ATCC 700669]
 gi|225723349|gb|ACO19202.1| domain of unknown function, putative [Streptococcus pneumoniae JJA]
 gi|301800592|emb|CBW33233.1| putative membrane protein [Streptococcus pneumoniae OXC141]
 gi|301802499|emb|CBW35258.1| putative membrane protein [Streptococcus pneumoniae INV200]
 gi|302598395|gb|EFL65439.1| hypothetical protein CGSSpBS455_04426 [Streptococcus pneumoniae
           BS455]
 gi|302636993|gb|EFL67482.1| hypothetical protein CGSSp14BS292_10869 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302640247|gb|EFL70702.1| hypothetical protein CGSSpBS293_06444 [Streptococcus pneumoniae
           SP-BS293]
 gi|302641883|gb|EFL72238.1| hypothetical protein CGSSpBS458_09831 [Streptococcus pneumoniae
           BS458]
 gi|302644820|gb|EFL75068.1| hypothetical protein CGSSpBS457_09625 [Streptococcus pneumoniae
           BS457]
 gi|302646810|gb|EFL77035.1| hypothetical protein CGSSpBS397_08164 [Streptococcus pneumoniae
           BS397]
          Length = 256

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 79/212 (37%), Gaps = 16/212 (7%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM----ISHVDKS 124
           +A  +S  V     + +     +   I  +++    F   +   +  L+    +S +   
Sbjct: 43  IAFYSSFSVFIMAIISTTKRFSQSKEIKWRLIFTVSFSSVLGGFLGHLIFQVLLSQLSVR 102

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-L 183
            ++    I   +M ++           +F       I G++ G +S  LG+GGG     L
Sbjct: 103 LVSIVQMILLFVMLLVSFVLTDFKKTYQFDKIGFYMICGLLLGLISSFLGIGGGPLNVSL 162

Query: 184 LMLFYGASIYKATATSAGVSALIAFPA-LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           LM+F+  SI +AT  S  +           + + +G     L P          V +I  
Sbjct: 163 LMVFFSISIKEATMYSLAIIFFSQLSHLATIVVVTGLNQYHLAP----------VPVIFL 212

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            SI    L T +S ++ + ++   F  ++F  
Sbjct: 213 ASICGGVLGTVVSKVLPENWVRYCFKGMLFFV 244


>gi|94265846|ref|ZP_01289577.1| Protein of unknown function DUF81 [delta proteobacterium MLMS-1]
 gi|93453621|gb|EAT04014.1| Protein of unknown function DUF81 [delta proteobacterium MLMS-1]
          Length = 384

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 54/122 (44%), Gaps = 8/122 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++  F+   ++   GVGGG ++VP L+           + M++A GTS   +     
Sbjct: 257 ILPLLGGFVIAAIAAFLGVGGGFMLVPFLTSI-------SGLPMYLAAGTSAMAVVIGMA 309

Query: 84  MSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +S + +   G  ++  ++   +  + + +++      ++ +  L + F +    +G+  +
Sbjct: 310 VSILSYLAAGVLVHWPLIGTQLAGVFVGSMIGPRTSQYIPEKILTRIFIVLAFYVGLNFM 369

Query: 143 KR 144
            R
Sbjct: 370 AR 371



 Score = 53.2 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 46/125 (36%), Gaps = 12/125 (9%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLV 213
              +  + G V   ++  LGVGGG      +    G  +Y A  TSA    +    ++L 
Sbjct: 255 SPILPLLGGFVIAAIAAFLGVGGGFMLVPFLTSISGLPMYLAAGTSAMAVVIGMAVSILS 314

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            + +G             V+   +   L    + + +  + S  I +K LT  F ++ F 
Sbjct: 315 YLAAGV-----------LVHWPLIGTQLAGVFVGSMIGPRTSQYIPEKILTRIFIVLAFY 363

Query: 274 TSFVF 278
               F
Sbjct: 364 VGLNF 368


>gi|190892178|ref|YP_001978720.1| hypothetical protein [Rhizobium etli CIAT 652]
 gi|190697457|gb|ACE91542.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652]
          Length = 261

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 82/248 (33%), Gaps = 25/248 (10%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G +  + G GGGL+ VP +  A    GI         +GT+       +  + + + R G
Sbjct: 20  GFVDAIAG-GGGLITVPAMLIA----GIPPLQT----LGTNKVQSIFGAASATLAYARKG 70

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY---CE 150
            + +        +  +   + + + + V    L     +  + + I    +  L      
Sbjct: 71  HVQLHEQLPMALMAVMGGAIGAALATIVPGQVLQAIMPVLLVAIAIFFAVKPNLNDLDKH 130

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
           R               GF  G  G G G  F    +   G  + KATA +  ++      
Sbjct: 131 RIITPFVFGLTLVPAIGFYDGVFGPGTGSFFMLAFVTLAGFGVLKATAHTKLLNFGSNLG 190

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           AL+V              S G +     L++     L   L ++L+  IG K +     +
Sbjct: 191 ALVVFA------------SFGAILWKIGLLMGICQFLGAQLGSRLAMRIGAKLIKPLLVI 238

Query: 270 IMFTTSFV 277
           +    +  
Sbjct: 239 VCVALAVK 246


>gi|115265514|dbj|BAF32776.1| membrane protein [Pseudomonas syringae pv. actinidiae]
          Length = 266

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 99/273 (36%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +VA  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 13  FVVAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGG 64

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + HR++  I+ K+            ++T   +S +        + + +A     LL  +
Sbjct: 65  VLVHRKNDNIDWKVTGLLTLGSVPAVLLTLWFLSTLHTAPDALNAIIKQALGYVLLLTAL 124

Query: 140 LMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + +L                     +  I G++ G +     +G G      L +L
Sbjct: 125 AVLFKKKLLAFAHGRGDGQSFFSGTSLTVLTVITGLILGTMVALTSIGAGALGTVALFIL 184

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +              + GL   S+G +N   +  +L  S+ 
Sbjct: 185 YPLLPTRRLVGTEIAHAVPLTL------------VAGLGHASMGNMNWELLGWLLMGSLP 232

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + ++  +    L    ++++    F  A
Sbjct: 233 GIYLGSHMAGRVSDDLLRPFLAIMLGMIGFKLA 265



 Score = 41.6 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 45/120 (37%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 153 VLTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAVPLTL 206

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G +N ++L   +        + S M   V    L    AI   ++G  +  
Sbjct: 207 VAGLGHASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDDLLRPFLAIMLGMIGFKLAF 266



 Score = 39.3 bits (91), Expect = 0.65,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                 + G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 9   GGLGFVVAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 66


>gi|30020577|ref|NP_832208.1| hypothetical protein BC2446 [Bacillus cereus ATCC 14579]
 gi|228958743|ref|ZP_04120456.1| hypothetical protein bthur0005_22440 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229051349|ref|ZP_04194856.1| hypothetical protein bcere0027_52780 [Bacillus cereus AH676]
 gi|229112948|ref|ZP_04242455.1| hypothetical protein bcere0018_51690 [Bacillus cereus Rock1-15]
 gi|229127883|ref|ZP_04256869.1| hypothetical protein bcere0015_23300 [Bacillus cereus BDRD-Cer4]
 gi|229145089|ref|ZP_04273482.1| hypothetical protein bcere0012_22480 [Bacillus cereus BDRD-ST24]
 gi|29896128|gb|AAP09409.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579]
 gi|228638410|gb|EEK94847.1| hypothetical protein bcere0012_22480 [Bacillus cereus BDRD-ST24]
 gi|228655648|gb|EEL11500.1| hypothetical protein bcere0015_23300 [Bacillus cereus BDRD-Cer4]
 gi|228670491|gb|EEL25827.1| hypothetical protein bcere0018_51690 [Bacillus cereus Rock1-15]
 gi|228722002|gb|EEL73440.1| hypothetical protein bcere0027_52780 [Bacillus cereus AH676]
 gi|228800958|gb|EEM47862.1| hypothetical protein bthur0005_22440 [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 252

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 107/265 (40%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  ++ + L+ + + L+G +  + G GGG++ +P++            +   VA+ T+  
Sbjct: 2   DFTIELLILLFLVAVLAGWIDTIAG-GGGMITIPIMLLV--------GMSPSVAIATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  ++M+ +   +   IN+K ++  I +  + +V+   ++  +   +L        ++
Sbjct: 53  QGSSGTLMATVFFIKKKEINLKEMRLSILMTFLGSVLGGWLVLQIRAEYLIMILPFLLII 112

Query: 137 MGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           +G+  L    +  E   RK              GF  G  G G G    L  +L  G S 
Sbjct: 113 IGLYFLLSPNIANEDRPRKISMLLFALTVAPFLGFYDGFFGPGTGSLIALAFILLCGYSA 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++    F ALL  I  G        W++G       LI++   I+ + +  
Sbjct: 173 TRATANAKILNFTSNFAALLYFIIFGQ-----IDWTIG-------LIMMLGQIIGSYIGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           K+    G   +     ++ F  +  
Sbjct: 221 KMVLTKGTSLIRPIVVIVCFVMAIK 245


>gi|290954165|ref|ZP_06558786.1| hypothetical protein FtulhU_07912 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312435|ref|ZP_06803212.1| hypothetical protein FtulhU_07904 [Francisella tularensis subsp.
           holarctica URFT1]
          Length = 366

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 103/265 (38%), Gaps = 25/265 (9%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           +M     +        I+   FL+  +  + G GGGL+ +P LS           + +  
Sbjct: 108 MMQHFFAEHFYILCVFIVSMGFLASFIDAIAG-GGGLISIPALSL--------TGLPIVT 158

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
            +GT+    +  + M+ +++ + G I++K +   +    I     +L+   +   F+N  
Sbjct: 159 VLGTNKFQASIDTGMAVLKYYKSGLIDIKTVIRGLVAGFIGACCGTLLTLLIHNDFMNNI 218

Query: 130 FAIFCLLMGILMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
             I  + + I  +    L     +++  +     ++G + G   G  G G G    + ++
Sbjct: 219 VPILLIAVFIFSIVNKNLGVAQGKKRMSEVAFFTLFGFILGAYDGFFGPGTGNLWIIAIV 278

Query: 187 FY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           ++ G +  +A+  +  ++      +L V   SG             VNI   L++   S 
Sbjct: 279 YFLGYTFLQASGYAKMLNLKSNVFSLTVFALSGQ------------VNIAFGLLMALGSF 326

Query: 246 LITPLATKLSYMIGKKYLTIGFSMI 270
                 +++  + G K +   F ++
Sbjct: 327 FGGIAGSRMVILKGSKLVRPIFIIV 351


>gi|153012049|ref|YP_001373260.1| hypothetical protein Oant_4660 [Ochrobactrum anthropi ATCC 49188]
 gi|151563937|gb|ABS17431.1| protein of unknown function DUF81 [Ochrobactrum anthropi ATCC
           49188]
          Length = 260

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 97/264 (36%), Gaps = 25/264 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + I   + +  + G + GL G GG ++  P+L      +G+      HVA+GT    ++ 
Sbjct: 5   NSILAAVGSGSVVGFMLGLLGGGGSILATPLLLYV---VGVSQP---HVAIGTGALAVSV 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +F  H   G +  +    +  +  I  ++ S +   +D   L   F I  +++G+ 
Sbjct: 59  NAFANFTSHALKGHVWWRCGVVFSALGVIGAIIGSSLGKALDGDRLIFLFGILMIVIGLF 118

Query: 141 MLKRDRLYCERKFPDNYVKYIWG----MVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
           MLK  +     + P +    +      + +G  SG  G+GGG      LML  G  +  A
Sbjct: 119 MLKPKKRLDVERRPIDLRMCLVTAAVALASGAASGFFGIGGGFLIVPGLMLATGMPMINA 178

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TS            L    SG             V+       +   I+   L   L+
Sbjct: 179 VGTSLLSVGAFGLATALNYASSGL------------VDWWLAGEFIGGGIIGGVLGMMLA 226

Query: 256 YMIGK--KYLTIGFSMIMFTTSFV 277
             +      L   F+ I+F  +  
Sbjct: 227 TRLSAYKNILNRIFAAIIFMVASY 250


>gi|182684753|ref|YP_001836500.1| hypothetical protein SPCG_1783 [Streptococcus pneumoniae CGSP14]
 gi|182630087|gb|ACB91035.1| hypothetical protein SPCG_1783 [Streptococcus pneumoniae CGSP14]
          Length = 256

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 79/212 (37%), Gaps = 16/212 (7%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM----ISHVDKS 124
           +A  +S  V     + +     +   I  +++    F   +   +  L+    +S +   
Sbjct: 43  IAFYSSFSVFIMAIISTIKRFSQSKEIKWRLIFTVSFSSVLGGFLGHLIFQVLLSQLSVR 102

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-L 183
            ++    I   +M ++           +F       I G++ G +S  LG+GGG     L
Sbjct: 103 LVSIVQMILLFVMLLVSFVLTDFKKTYQFDKIEFYMICGLLLGLISSFLGIGGGPLNVSL 162

Query: 184 LMLFYGASIYKATATSAGVSALIAFPA-LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           LM+F+  SI +AT  S  +           + + +G     L P          V +I  
Sbjct: 163 LMVFFSISIKEATMYSLAIIFFSQLSHLATIVVVTGLNQYHLAP----------VPVIFL 212

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            SI    L T +S ++ + ++   F  ++F  
Sbjct: 213 ASICGGVLGTVVSKVLPENWVRYCFKGMLFFV 244


>gi|227509879|ref|ZP_03939928.1| possible permease [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227190803|gb|EEI70870.1| possible permease [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 244

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A  TSL    P  V+    H R G +        +      TV+ SL+   +  +    A
Sbjct: 42  AAATSLFTALPALVVGTYSHYRTGNMKFSYGNKLLITALPATVIGSLVSGVIPVTLYTWA 101

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            AI   ++G+  L++            +  Y++G ++G + G  G+ GG      +L  G
Sbjct: 102 IAIILFVLGVQTLRKSFKGKPSSNLKPWTVYLFGALSGLMVGIAGLSGGGPVMAGLLLLG 161

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
            ++ +A ATS+     ++   L+     G
Sbjct: 162 LNMPQAAATSSYALIALSIVGLIFHSTQG 190


>gi|57238492|ref|YP_179623.1| hypothetical protein CJE1642 [Campylobacter jejuni RM1221]
 gi|86152557|ref|ZP_01070762.1| inner membrane protein yfcA [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|148925639|ref|ZP_01809327.1| putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|57167296|gb|AAW36075.1| membrane protein, putative [Campylobacter jejuni RM1221]
 gi|85843442|gb|EAQ60652.1| inner membrane protein yfcA [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|145845649|gb|EDK22740.1| putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|315058923|gb|ADT73252.1| Putative membrane protein YfcA [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 254

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 92/263 (34%), Gaps = 28/263 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y  ++   +  +G +  + G GGGL+ +P L            I  H+++ T+       
Sbjct: 10  YYFILFFVALFAGFIDSIVG-GGGLITLPALIAC--------GIPAHLSLATNKLQSVFG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + + + +  T  +  L   +F   +   + S  +  V    L     IF  L  +  
Sbjct: 61  SFTATLTYFKSTT--LPHLAWGVFFTALGAAIGSYSVLFVKDEQLKLIILIFLTLTFLYT 118

Query: 142 LKRDRLYCERKFPD----NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
             R  L      P          I G+  GF  G LG G G F     +   G ++ KA 
Sbjct: 119 ALRPNLGKHESEPKIKNIKIFHLICGLTLGFYDGFLGPGTGSFWIFACVMLLGFNMRKA- 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S     L     ++      W    L  W++G       L++    +L   L +KL  
Sbjct: 178 --SINTKILNFTSNIIALAIFLWQYELL--WAVG-------LLMGVGQVLGAYLGSKLVL 226

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
               K++   F +++  T    A
Sbjct: 227 KTNGKFIKTLFLIVVGATIIKVA 249


>gi|332074157|gb|EGI84635.1| hypothetical protein SPAR68_1831 [Streptococcus pneumoniae GA41301]
          Length = 256

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 79/212 (37%), Gaps = 16/212 (7%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM----ISHVDKS 124
           +A  +S  V     + +     +   I  +++    F   +   +  L+    +S +   
Sbjct: 43  IAFYSSFSVFIMAIISTTKRFSQSKEIKWRLIFTVSFSSVLGGFLGHLIFQVLLSQLSVR 102

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-L 183
            ++    I   +M ++           +F       I G++ G +S  LG+GGG     L
Sbjct: 103 LVSIVQMILLFVMLLVSFVLTDFKKTYQFDKIGFYIICGLLLGLISSFLGIGGGPLNVSL 162

Query: 184 LMLFYGASIYKATATSAGVSALIAFPA-LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           LM+F+  SI +AT  S  +           + + +G     L P          V +I  
Sbjct: 163 LMVFFSISIKEATMYSLAIIFFSQLSHLATIVVVTGLNQYHLAP----------VPVIFL 212

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            SI    L T +S ++ + ++   F  ++F  
Sbjct: 213 ASICGGVLGTVVSKVLPENWVRYCFKGMLFFV 244


>gi|323498445|ref|ZP_08103441.1| hypothetical protein VISI1226_05541 [Vibrio sinaloensis DSM 21326]
 gi|323316518|gb|EGA69533.1| hypothetical protein VISI1226_05541 [Vibrio sinaloensis DSM 21326]
          Length = 259

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 96/259 (37%), Gaps = 26/259 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + + SF+S TL+ L G G GL+  P+L            +   VA+ T         + +
Sbjct: 17  LFIGSFISNTLASLSGGGAGLLQFPLLIFF--------GLPFSVALATHKVASVALGLGA 68

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H +  + +  I    + V  +  V+ + ++  + + F  K   +  L +G+    + 
Sbjct: 69  AFTHIKQRSFSYPIAIYLVVVGSVGVVIGANIVLLIPEQFAEKLLGLMILAIGLYSRFKK 128

Query: 146 RL--YCERKFPDNYVKYIWGMV---TGFLSGALGVGGGIFTNLLML-FYGASIYKATATS 199
            L      +  D +   I G+     G ++G+L  G G+   + ++ ++G +  +A A +
Sbjct: 129 ELGQTESPQHRDRWGFIIGGLGLITIGIINGSLTAGSGLLVTMFLVRWFGFNYKQAVALT 188

Query: 200 AGV-SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                        +  + +G             V    + I+L  S +   L   L+   
Sbjct: 189 LLCVGLFWNGIGGVAIVQAGAP-----------VYWPWLPILLIGSFVGGGLGAYLTTRY 237

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             + + I F ++ F     
Sbjct: 238 SNQMIKICFEILTFAVGVK 256


>gi|296501677|ref|YP_003663377.1| hypothetical protein BMB171_C0840 [Bacillus thuringiensis BMB171]
 gi|296322729|gb|ADH05657.1| hypothetical protein BMB171_C0840 [Bacillus thuringiensis BMB171]
          Length = 255

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 76/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  F++  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLMILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +N+K     + +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GSATSNIVFYRSGNLNLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 179 AGNAKLLNLGSNVGALLMFMYVG 201



 Score = 38.5 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 51/120 (42%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +N+ +   ++P++ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLNLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118


>gi|229073055|ref|ZP_04206245.1| hypothetical protein bcere0025_52120 [Bacillus cereus F65185]
 gi|229079539|ref|ZP_04212077.1| hypothetical protein bcere0023_21930 [Bacillus cereus Rock4-2]
 gi|229178816|ref|ZP_04306176.1| hypothetical protein bcere0005_21710 [Bacillus cereus 172560W]
 gi|228604581|gb|EEK62042.1| hypothetical protein bcere0005_21710 [Bacillus cereus 172560W]
 gi|228703764|gb|EEL56212.1| hypothetical protein bcere0023_21930 [Bacillus cereus Rock4-2]
 gi|228710060|gb|EEL62044.1| hypothetical protein bcere0025_52120 [Bacillus cereus F65185]
          Length = 252

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 105/265 (39%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  ++ + L+ + + L+G +  + G GGG++ +P++            +   VA+ T+  
Sbjct: 2   DFTIELLILLFLVAVLAGWIDTIAG-GGGMITIPIMLLV--------GMSPSVAIATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  ++M+ +   +   IN+K ++  I +    +V    ++  +   +L        + 
Sbjct: 53  QGSSGTLMATVFFIKKKEINLKEMRLSILMTFFGSVFGGWLVLQIRAEYLIMILPFLLVF 112

Query: 137 MGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           +GI  L    +  E   RK            + GF  G  G G G    L  +L  G S 
Sbjct: 113 IGIYFLLSPNIANEDRPRKISMLLFALTVAPLLGFYDGFFGPGTGSLIALAFILLCGYSA 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++    F ALL  I  G        W++G       LI++   I+ + +  
Sbjct: 173 TRATANAKILNFTSNFAALLYFIIFGQ-----IDWTIG-------LIMMLGQIIGSYIGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           K+    G   +     ++ F  +  
Sbjct: 221 KMVLTKGTALIRPIVVIVCFVMAIK 245


>gi|56750616|ref|YP_171317.1| hypothetical protein syc0607_d [Synechococcus elongatus PCC 6301]
 gi|56685575|dbj|BAD78797.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 256

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 70/238 (29%), Gaps = 31/238 (13%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL            I    A+  +L V+   S++  + H R G I+      +     +
Sbjct: 29  PVLVYVL-------DIDPKTAIAMTLVVVGSASLLGAIPHARRGNIDWLRTGVFGSSTMV 81

Query: 110 TTVVTSLMI--SHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
                + +     V        F +  L     ML       +         +     T 
Sbjct: 82  GAFGGARLALLPWVTAQLQMGLFGVAILAAASFMLWPQSPKADDPVLSYPRPFCLSCWTW 141

Query: 168 FLSGALGVGGG----------IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
            +S  +GVG                 L+L       KA  TS  +  L A   L+     
Sbjct: 142 LISEGIGVGVLTGLVGVGGGFAIVPALVLLGKVPTRKAIGTSLVIIGLNAIAGLMGY--- 198

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            WG   LP         G  L     + L T L   +S  +  + L   F++++    
Sbjct: 199 -WGRLSLP--------WGLTLTFAASACLGTLLGGAVSQRLSTQGLQRSFALLLLAIG 247



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 7/100 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
             +VP L            +    A+GTSL +I   ++   M +    ++   +   +  
Sbjct: 162 FAIVPALVLL-------GKVPTRKAIGTSLVIIGLNAIAGLMGYWGRLSLPWGLTLTFAA 214

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              + T++   +   +    L ++FA+  L +G  +L R 
Sbjct: 215 SACLGTLLGGAVSQRLSTQGLQRSFALLLLAIGGFVLARS 254


>gi|114778300|ref|ZP_01453159.1| hypothetical protein SPV1_13207 [Mariprofundus ferrooxydans PV-1]
 gi|114551402|gb|EAU53958.1| hypothetical protein SPV1_13207 [Mariprofundus ferrooxydans PV-1]
          Length = 248

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 89/236 (37%), Gaps = 17/236 (7%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
           FG GGG++ VP L            + +  A+  SL V++  S+ + +  +    +  ++
Sbjct: 19  FGAGGGMLTVPALMMV-------GDMSVKEAVPMSLWVVSLVSLTAAIHQQVWKQLQYRL 71

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK 159
           L          +   + + + + +S      AI  L + +      RL  +         
Sbjct: 72  LIILGATGIAGSASGARIGAGMSESLQLAILAILILTVAVWTGF-VRLENKVSTFRYIPA 130

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            + G   G L+G LGVGGG      ++F G        T+ G S +I        I S  
Sbjct: 131 VLAGFAIGLLTGMLGVGGGFLLVPALIFLGIGH---FPTAVGHSLMIIIANAAGGIISYS 187

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            +  +       ++IG  L +  I+ + + +   L   +    L  GF++++    
Sbjct: 188 TVESV------HIDIGLTLSVALIAAVGSIIGGILLKRLPAARLQKGFAILLIFLG 237



 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 9/114 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A F  G L+G+ GVGGG ++VP L                 A+G SL +I   +    
Sbjct: 131 VLAGFAIGLLTGMLGVGGGFLLVPALIFL-------GIGHFPTAVGHSLMIIIANAAGGI 183

Query: 87  MEHRRHGTINMKILKDWIFVLP--ITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           + +    ++++ I       L   + +++  +++  +  + L K FAI  + +G
Sbjct: 184 ISYSTVESVHIDIGLTLSVALIAAVGSIIGGILLKRLPAARLQKGFAILLIFLG 237


>gi|85713974|ref|ZP_01044963.1| hypothetical protein NB311A_07458 [Nitrobacter sp. Nb-311A]
 gi|85699100|gb|EAQ36968.1| hypothetical protein NB311A_07458 [Nitrobacter sp. Nb-311A]
          Length = 371

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 8/114 (7%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + LI+      G +SG+FG+GGG +M P+L            I   V
Sbjct: 64  VQLYLPIADIPVNVFLILAMGAAVGFVSGMFGIGGGFLMTPLLIFI--------GIAPAV 115

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           A+ T    IA +S    + + R   ++  +    +    I TV      + +  
Sbjct: 116 AVATVTSHIAASSFSGALSYWRKRAVDPMLAVILLSGGIIGTVFGVSTFTRLRS 169



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 26/58 (44%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
           ++    G   GF+SG  G+GGG     L++F G +   A AT     A  +F   L  
Sbjct: 78  FLILAMGAAVGFVSGMFGIGGGFLMTPLLIFIGIAPAVAVATVTSHIAASSFSGALSY 135


>gi|323698722|ref|ZP_08110634.1| protein of unknown function DUF81 [Desulfovibrio sp. ND132]
 gi|323458654|gb|EGB14519.1| protein of unknown function DUF81 [Desulfovibrio desulfuricans
           ND132]
          Length = 385

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 49/120 (40%), Gaps = 9/120 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++  F    L+   GVGGG ++VP L+           + M++  GTS   +    V S 
Sbjct: 264 VIGGFFISALASFLGVGGGFLLVPFLTSV-------AGLPMYLVAGTSAMAVFVGMVNSI 316

Query: 87  MEHR--RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +   R   +   ++   +  + I +++      ++   +L + F +  + +G+    +
Sbjct: 317 ASYMILRSTPVEWSLIGAELVGIVIGSIIGPKTSKYIPDIWLKRIFIVLAVYVGLKYTLK 376



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 13/126 (10%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLV 213
           +  +  I G     L+  LGVGGG      +    G  +Y    TSA    +    ++  
Sbjct: 259 NPLIPVIGGFFISALASFLGVGGGFLLVPFLTSVAGLPMYLVAGTSAMAVFVGMVNSIAS 318

Query: 214 RIYSGWGLNGLPPWSLGFVNIGA-VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
            +      +    WSL    IGA ++ I+  SI    +  K S  I   +L   F ++  
Sbjct: 319 YMIL---RSTPVEWSL----IGAELVGIVIGSI----IGPKTSKYIPDIWLKRIFIVLAV 367

Query: 273 TTSFVF 278
                +
Sbjct: 368 YVGLKY 373


>gi|319761109|ref|YP_004125046.1| hypothetical protein Alide_0381 [Alicycliphilus denitrificans BC]
 gi|330822967|ref|YP_004386270.1| hypothetical protein Alide2_0326 [Alicycliphilus denitrificans
           K601]
 gi|317115670|gb|ADU98158.1| protein of unknown function DUF81 [Alicycliphilus denitrificans BC]
 gi|329308339|gb|AEB82754.1| protein of unknown function DUF81 [Alicycliphilus denitrificans
           K601]
          Length = 252

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 93/253 (36%), Gaps = 25/253 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +AS L+G +  + G GGGL++VP L   F       +      +GT+       + 
Sbjct: 4   IIVSLASLLAGFVDAIVG-GGGLILVPALFATFT------NAPPATLLGTNKSASICGTA 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+  ++ R   +  + +          +   +  ++ V   FL K   +  L + +  L 
Sbjct: 57  MATWQYSRRVQMPWRAMLPAAGAGFTGSFFGAWTVTVVSADFLRKLLPLILLAVLLYTLA 116

Query: 144 RDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           +  L    +       +  +  + G+  GF  G  G G G F     +   G     A+ 
Sbjct: 117 KKELGRHHEPRFAGRMETALACLIGLAIGFYDGFFGPGAGSFFVFAFVRLLGYDFLNASV 176

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           ++  ++      A+++              S G V     L +   ++  + L T ++  
Sbjct: 177 SAKLLNLATNIAAIILFA------------SKGHVWWHFALPLAVANVAGSLLGTHMALR 224

Query: 258 IGKKYLTIGFSMI 270
            G  ++   F ++
Sbjct: 225 HGTGFVRAIFILV 237



 Score = 35.8 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 35/118 (29%), Gaps = 9/118 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV-AMGTSLGVIAPTS 82
            L  +     G   G FG G G   V    +      ++ S+   +  + T++  I   +
Sbjct: 135 ALACLIGLAIGFYDGFFGPGAGSFFVFAFVRLLGYDFLNASVSAKLLNLATNIAAIILFA 194

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                     G +               +++ + M       F+   F +   L+ + 
Sbjct: 195 S--------KGHVWWHFALPLAVANVAGSLLGTHMALRHGTGFVRAIFILVVSLLILK 244


>gi|77920077|ref|YP_357892.1| hypothetical protein Pcar_2483 [Pelobacter carbinolicus DSM 2380]
 gi|77546160|gb|ABA89722.1| hypothetical protein Pcar_2483 [Pelobacter carbinolicus DSM 2380]
          Length = 119

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 48/124 (38%), Gaps = 8/124 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  L+ +   L G  +   G+GGG +M+P+L                 A+GTS   I   
Sbjct: 4   HFFLLALLGILVGVGASFSGLGGGFLMIPLLLFL--------GFSAQKAVGTSFLAILVI 55

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + + H +   ++ ++         I   + + ++ HV  +   + FA   L +   +
Sbjct: 56  SASALLAHNKLANVDYRVGLLLGVGGIIGAQLGARVLEHVSTASFKRVFACILLGLAGYL 115

Query: 142 LKRD 145
             + 
Sbjct: 116 FFQK 119



 Score = 42.0 bits (98), Expect = 0.095,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 12/119 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           ++  + G++ G  +   G+GGG     L+LF G S  KA  TS     +I+  ALL    
Sbjct: 6   FLLALLGILVGVGASFSGLGGGFLMIPLLLFLGFSAQKAVGTSFLAILVISASALLA--- 62

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                     + +G       L++    I+   L  ++   +        F+ I+   +
Sbjct: 63  --HNKLANVDYRVG-------LLLGVGGIIGAQLGARVLEHVSTASFKRVFACILLGLA 112


>gi|325066985|ref|ZP_08125658.1| hypothetical protein AoriK_04162 [Actinomyces oris K20]
          Length = 347

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 72/205 (35%), Gaps = 14/205 (6%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T++ S   H R G  + +++        +     + ++SH+         A   +L+G
Sbjct: 52  IGTTLASGASHWRLGNTDPRLVIRLGLPGAVGAFGGATVLSHLSTRAATPVTASLLILLG 111

Query: 139 ILMLKRDRLYC------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
             +L R  L         R      +    G+V GF+    G G G      +L  G + 
Sbjct: 112 TYVLGRFALRPPSGSGSRRSPHGRRLLVPLGLVGGFVDATGGGGWGPVVTTTLLTGGRTA 171

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +    S G S  +   A      +G G  G        +++G VL +L   ++  P++ 
Sbjct: 172 PRTVVGSVGASEFLVTVAASAGFLTGLGTAG--------ISLGIVLTLLAGGLVAAPISA 223

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
            L   +    L      ++  T+  
Sbjct: 224 WLVSRLPGAVLGTAVGGLILATNLR 248


>gi|258516083|ref|YP_003192305.1| hypothetical protein Dtox_2926 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257779788|gb|ACV63682.1| protein of unknown function DUF81 [Desulfotomaculum acetoxidans DSM
           771]
          Length = 318

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 8/120 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +A F+   +S   GVGGG ++VP        MG      M++  GT    I  TS+ S 
Sbjct: 196 FLAGFVVAIISSSMGVGGGFLLVP---FISSFMGFP----MYIVAGTVALSILITSLASI 248

Query: 87  MEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
             + + G+ ++  +L   +  + I + +   +  HV   +L    A+     G   +   
Sbjct: 249 ANYMQLGSTVDYNMLAFELVGIVIGSYLGPKLSKHVKAIYLKGLLAVILTYSGTQYVFGK 308



 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 48/118 (40%), Gaps = 12/118 (10%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLV 213
              V ++ G V   +S ++GVGGG      +  F G  +Y    T A    + +  ++  
Sbjct: 191 KTVVPFLAGFVVAIISSSMGVGGGFLLVPFISSFMGFPMYIVAGTVALSILITSLASIAN 250

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            +  G  ++          N+ A  ++    ++ + L  KLS  +   YL    ++I+
Sbjct: 251 YMQLGSTVD---------YNMLAFELVGI--VIGSYLGPKLSKHVKAIYLKGLLAVIL 297


>gi|228952737|ref|ZP_04114810.1| hypothetical protein bthur0006_21340 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228806908|gb|EEM53454.1| hypothetical protein bthur0006_21340 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 252

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 105/265 (39%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  ++ + L+ + + L+G +  + G GGG++ +P++            +   VA+ T+  
Sbjct: 2   DFTIELLILLFLVAVLAGWIDTIAG-GGGMITIPIMLLV--------GMSPSVAIATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  ++M+ +   +   IN+K ++  I +    +V    ++  +   +L        + 
Sbjct: 53  QGSSGTLMATVFFIKKKEINLKEMRLSILMTFFGSVFGGWLVLQIRAEYLIMILPFLLVF 112

Query: 137 MGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           +GI  L    +  E   RK            + GF  G  G G G    L  +L  G S 
Sbjct: 113 IGIYFLLSPNIANEDRPRKISMLLFALTVAPLLGFYDGFFGPGTGSLIALAFILLCGYSA 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++    F ALL  I  G        W++G       LI++   I+ + +  
Sbjct: 173 TRATANAKILNFTSNFAALLYFIIFGQ-----IDWTIG-------LIMMLGQIIGSYIGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           K+    G   +     ++ F  +  
Sbjct: 221 KMVLTKGTSLIRPIVVIVCFVMAIK 245


>gi|229108534|ref|ZP_04238149.1| integral membrane protein [Bacillus cereus Rock1-15]
 gi|228674941|gb|EEL30170.1| integral membrane protein [Bacillus cereus Rock1-15]
          Length = 255

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 76/203 (37%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++I   FL+  +  + G GGGL+ +PVL            +    A+ T+      
Sbjct: 8   SVLMILIAFGFLAAFIDSVVG-GGGLIALPVLLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R G +N+K     + +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GSATSNIVFYRSGNLNLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +         +K    +V      +       G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 179 AGNAKLLNLGSNVGALLMFMYVG 201



 Score = 38.9 bits (90), Expect = 0.90,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 51/120 (42%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +   +G +  F+   +G GGG+    ++LF G +   A AT+   S + +  + +V    
Sbjct: 12  ILIAFGFLAAFIDSVVG-GGGLIALPVLLFTGLNPASAVATNKLASTMGSATSNIVF--- 67

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +N+ +   ++P++ + + +     +++  + L     +++   +  
Sbjct: 68  ---------YRSGNLNLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118


>gi|88608664|ref|YP_506134.1| hypothetical protein NSE_0240 [Neorickettsia sennetsu str.
           Miyayama]
 gi|88600833|gb|ABD46301.1| putative membrane protein [Neorickettsia sennetsu str. Miyayama]
          Length = 313

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 103/293 (35%), Gaps = 62/293 (21%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  +I    +SG ++GLFG+GG ++++P L            +   VA+ +++     + 
Sbjct: 17  IYAVIALGLISGIMAGLFGIGGNIIIIPTLIFM--------GVAPAVAVSSAVNQTIASG 68

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--DKSFLNKAFAIFCLLMGI- 139
             SF+   + G  ++ I             + S ++ ++    +     F ++ +++ I 
Sbjct: 69  FASFLNQFKQGNTDLPIALSLSLGGLFGITLGSFLLMYLRNKGNVDITIFLVYVVMLSIT 128

Query: 140 ------------LMLKRDRLYCERKFPDNY---------------------------VKY 160
                       L L R+ +         Y                              
Sbjct: 129 GCVMAFDSIRKLLCLFRNEVEPHEHMEKPYKNKLIKLINRLPLRYHFHSAKGDISLVALA 188

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           ++G V G +    GVGGG     ++++ +   +  A  TS   S L++   +        
Sbjct: 189 LFGTVVGVILSISGVGGGFILVPVLMYVFNLPVRIAIGTSVAQSVLVSVATVFFHAI--- 245

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
                   +LG V++    ++   +I       KL+ +     + +  +++MF
Sbjct: 246 --------TLGTVDMLLGFLLSIGAICGVTFGAKLNLIFHPVVIRLLLALVMF 290



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 49/131 (37%), Gaps = 8/131 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + +   + G +  + GVGGG ++VPVL   F       ++ + +A+GTS+      S
Sbjct: 184 LVALALFGTVVGVILSISGVGGGFILVPVLMYVF-------NLPVRIAIGTSVAQSVLVS 236

Query: 83  VMSFMEHR-RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           V +   H    GT++M +               + +        +    A+      + +
Sbjct: 237 VATVFFHAITLGTVDMLLGFLLSIGAICGVTFGAKLNLIFHPVVIRLLLALVMFGGVLRL 296

Query: 142 LKRDRLYCERK 152
           L    +  E  
Sbjct: 297 LFTLLVTPESP 307


>gi|182679111|ref|YP_001833257.1| hypothetical protein Bind_2148 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182634994|gb|ACB95768.1| protein of unknown function DUF81 [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 343

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 13/198 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             +I + S  +  +S + G G GLV++P+L  A  +  +  +    +++GT       TS
Sbjct: 4   FVVIFIVSLFAFAVSTVSGGGAGLVLIPILGLAVPVAQVPAA----LSIGT------VTS 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +S +   R  +I   +++ ++      +V+ + +++ V   +L      F +   + + 
Sbjct: 54  SLSRIAVFRR-SIRWDVVRWFVPSALPFSVLGAWVLTRVSPLYLELLLGCFLVSNIVFVF 112

Query: 143 KRDRLYCER-KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +  +      K   N    + G   GF+SG  G  G +  N   L YG    +  AT A 
Sbjct: 113 RSSQNKQTHTKRLPNSSLVLIGAAAGFISGFTGAVG-LVFNQFYLRYGMRKEEIVATRAA 171

Query: 202 VSALIAFPALLVRIYSGW 219
              L+    L +    G 
Sbjct: 172 NEILLHAMKLALYFSFGL 189


>gi|296330693|ref|ZP_06873170.1| putative integral inner membrane protein [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305673949|ref|YP_003865621.1| putative integral inner membrane protein [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296152157|gb|EFG93029.1| putative integral inner membrane protein [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412193|gb|ADM37312.1| putative integral inner membrane protein [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 254

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 95/268 (35%), Gaps = 36/268 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II+     G L GL GVGG  ++ P+L       GI+ S    +A+GT L   + T +  
Sbjct: 5   IILMGLFVGALVGLTGVGGAALLTPLLIVL----GINPS----IAVGTDLVYNSITKLFG 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
              H R  TIN K++K        +  +   ++             +  A      L+ I
Sbjct: 57  VASHWRQKTINFKLVKYLAIGSIPSASLAIGILHLFPAFHQHQEEIIKHALGYVLTLVAI 116

Query: 140 LM---------LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YG 189
            +         L+ +R           +  + G+V GF+ G   +G G    + M++ + 
Sbjct: 117 SIIVRLFLDRKLRPNRWQLMPLENKRALTILIGIVFGFIVGLTSIGSGSLFAIAMIYLFN 176

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
               +   T    + L+   A ++              S G V+      +L  SI    
Sbjct: 177 MKASQIVGTDIAHAFLLVTAAGILNA------------SFGSVDYMLAANLLLGSIPGVL 224

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + + LS     + L    + I+  +   
Sbjct: 225 IGSHLSPRFSPRPLQFIMASIILVSGLK 252


>gi|317152899|ref|YP_004120947.1| hypothetical protein Daes_1186 [Desulfovibrio aespoeensis Aspo-2]
 gi|316943150|gb|ADU62201.1| protein of unknown function DUF81 [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 374

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 49/120 (40%), Gaps = 9/120 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +V  F    ++   GVGGG ++VP L+           + M++  GTS   +    + S 
Sbjct: 251 VVGGFFIAAMASFLGVGGGFLLVPFLTSV-------AGLPMYLVAGTSALAVFVGMINSI 303

Query: 87  MEHRRHGTI--NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +   G I     ++   +  + I +++      ++   +L + F +  L +GI    +
Sbjct: 304 ASYMFLGNITIEWSLIGVELVGIVIGSIIGPKTSKYIPDIWLKRLFILLALYVGIRYATK 363



 Score = 49.3 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 11/126 (8%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLV 213
           +  +  + G     ++  LGVGGG      +    G  +Y    TSA    +    ++  
Sbjct: 246 NPLIPVVGGFFIAAMASFLGVGGGFLLVPFLTSVAGLPMYLVAGTSALAVFVGMINSIAS 305

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            ++ G   N    WSL  V +   + I+  SI    +  K S  I   +L   F ++   
Sbjct: 306 YMFLG---NITIEWSLIGVEL---VGIVIGSI----IGPKTSKYIPDIWLKRLFILLALY 355

Query: 274 TSFVFA 279
               +A
Sbjct: 356 VGIRYA 361


>gi|255523946|ref|ZP_05390909.1| protein of unknown function DUF81 [Clostridium carboxidivorans P7]
 gi|296185184|ref|ZP_06853594.1| membrane family protein [Clostridium carboxidivorans P7]
 gi|255512377|gb|EET88654.1| protein of unknown function DUF81 [Clostridium carboxidivorans P7]
 gi|296050018|gb|EFG89442.1| membrane family protein [Clostridium carboxidivorans P7]
          Length = 251

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 82/221 (37%), Gaps = 18/221 (8%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             I  H+A+GT+      ++  S ++  +   ++  ILK  I    I  ++ +  +  + 
Sbjct: 36  AGIPPHLALGTNKFTSCCSTFSSSIKFAQSKKVDFNILKYLIPFSFIGGILGATTVLRIK 95

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT-----GFLSGALGVGG 177
            S+LN    I  L +G+  L    +  E +F +   K I   +      GF  G LG G 
Sbjct: 96  TSYLNTIVPILLLFVGLYSLFSKNIGMEDRFKNISRKNITLGIILALFLGFYDGFLGAGV 155

Query: 178 GIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G F    ++  Y  +  +A      ++ +    +++V    G             +N   
Sbjct: 156 GTFLIFGLIKIYNFNFIRAGGNCKVMNFVGNIASIIVFAVRGE------------INYKI 203

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            L +    ++   L  K++   G K +   F  +    +  
Sbjct: 204 GLPVAVFMVIGAHLGAKIALRKGSKIIKPIFVTMSLAIAAK 244


>gi|218887282|ref|YP_002436603.1| hypothetical protein DvMF_2192 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758236|gb|ACL09135.1| protein of unknown function DUF81 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 380

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 8/122 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +V   +   ++   GVGGG ++VP L+           + M++A GTS   +  + V
Sbjct: 256 ILPVVGGIVISAIAAFLGVGGGFLLVPFLTSI-------SQLPMYLAAGTSALAVLISMV 308

Query: 84  MSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            S       GT ++  ++   +  + I +V+      +   + L + F +  L +GI  +
Sbjct: 309 TSIATLVSKGTPLDWTMIGTELVGIFIGSVIGPRTSKYFSDTLLKRIFIVLALYVGIDYV 368

Query: 143 KR 144
            R
Sbjct: 369 LR 370



 Score = 42.4 bits (99), Expect = 0.077,   Method: Composition-based stats.
 Identities = 28/251 (11%), Positives = 67/251 (26%), Gaps = 63/251 (25%)

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLL 136
           +  ++++S   + + G + + +              ++      V  S     F +F L+
Sbjct: 126 VGFSALISSFNYYKMGRLVLPLALALGAGSLAGAWASAYFFAGKVSFSQYQGYFGLFVLV 185

Query: 137 MGILMLKRDRLYCERKFP------------------------------------------ 154
           +G+ +        +                                              
Sbjct: 186 LGLYLFWETSPAGQASKKKAKEAAKAFEETVKKIKSGEQVDEKSIGVHVISTSLTKCVFT 245

Query: 155 --------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSAL 205
                   +  +  + G+V   ++  LGVGGG      +       +Y A  TSA    +
Sbjct: 246 FSGVEFSFNPILPVVGGIVISAIAAFLGVGGGFLLVPFLTSISQLPMYLAAGTSALAVLI 305

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
               ++   +  G  L+     +        ++ I   S+    +  + S       L  
Sbjct: 306 SMVTSIATLVSKGTPLDWTMIGT-------ELVGIFIGSV----IGPRTSKYFSDTLLKR 354

Query: 266 GFSMIMFTTSF 276
            F ++      
Sbjct: 355 IFIVLALYVGI 365


>gi|326405543|ref|YP_004285625.1| hypothetical protein ACMV_33960 [Acidiphilium multivorum AIU301]
 gi|325052405|dbj|BAJ82743.1| hypothetical protein ACMV_33960 [Acidiphilium multivorum AIU301]
          Length = 273

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 79/225 (35%), Gaps = 22/225 (9%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            +  HVA+GTS   ++  +  +F  H R G +  +    +  +  +     S +    D 
Sbjct: 50  GLAPHVAIGTSALAVSANAFANFGGHARKGNVRWRSAAIFAVLGIVGAAAGSTLGKAFDG 109

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERK-------FPDNYVKYIWGMVTGFLSGALGVG 176
             L   FAI  + +G+LML+  R+                       +  G LSG  G+G
Sbjct: 110 KKLLFLFAILMITVGLLMLRPRRVADGTAGQAERLNAATLLAVAAAALTVGALSGFFGIG 169

Query: 177 GGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           GG      +LF  G  +  A  +S            +    SG             VN  
Sbjct: 170 GGFLIVPGLLFSTGMPMIFAIGSSLLSVGSFGLTTAVNYAASGL------------VNWP 217

Query: 236 AVLIILPISILITPLATKLSYMIGKKY--LTIGFSMIMFTTSFVF 278
             +  +   ++   + T+L+  +  +   L   F+ ++F  +   
Sbjct: 218 VAVEFIAGGVIGGLIGTRLAIHLAGRRAALNRIFAGLVFVVAVYM 262



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 44/101 (43%), Gaps = 9/101 (8%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++VP L            + M  A+G+SL  +    + + + +   G +N  +  ++I  
Sbjct: 173 LIVPGLLF-------STGMPMIFAIGSSLLSVGSFGLTTAVNYAASGLVNWPVAVEFIAG 225

Query: 107 LPITTVVTSLMISHVDKS--FLNKAFAIFCLLMGILMLKRD 145
             I  ++ + +  H+      LN+ FA    ++ + ML ++
Sbjct: 226 GVIGGLIGTRLAIHLAGRRAALNRIFAGLVFVVAVYMLYKN 266


>gi|239618319|ref|YP_002941641.1| protein of unknown function DUF81 [Kosmotoga olearia TBF 19.5.1]
 gi|239507150|gb|ACR80637.1| protein of unknown function DUF81 [Kosmotoga olearia TBF 19.5.1]
          Length = 244

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 92/237 (38%), Gaps = 20/237 (8%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
               L+G ++ L G GG ++ +P+L            +  ++A  T+   I   ++++  
Sbjct: 11  FVGLLAGIMNTLAG-GGSMLTLPMLMFL--------GLDANIANATNRIAIFFQNLVAVT 61

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
              + G    +I      V     ++ S +   +DK+ L K   I  L+M   ++++ +L
Sbjct: 62  SFEKKGVKAFRISLPLGTVAAAGAILGSFIALDLDKNLLQKVIGITLLIMTYFVIRKPKL 121

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
                  ++ ++ +     G   G +  G G      + F+         T+   +  I 
Sbjct: 122 KKSNSSTNSILRVLVFFGLGIYGGFIQAGIGFLMIAAITFF-------IGTNLVRTNAIK 174

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
              +L+   +   +      S G VN+   L++   ++    LA + +   G+K+L 
Sbjct: 175 VGIILIYTTTSLVVF----LSKGMVNVPVGLLLALGNMSGAYLAVRFAIKKGEKFLR 227


>gi|86149429|ref|ZP_01067660.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88596235|ref|ZP_01099472.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|218563071|ref|YP_002344850.1| putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|85840211|gb|EAQ57469.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88191076|gb|EAQ95048.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360777|emb|CAL35576.1| putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|284926676|gb|ADC29028.1| putative integral membrane protein [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315929006|gb|EFV08249.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 254

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 92/263 (34%), Gaps = 28/263 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y  ++   +  +G +  + G GGGL+ +P L            I  H+++ T+       
Sbjct: 10  YYFILFFVALFAGFIDSIVG-GGGLITLPALIAC--------GIPAHLSLATNKLQSVFG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + + + +  T  +  L   +F   +   + S  +  V    L     IF  L  +  
Sbjct: 61  SFTATLTYFKSTT--LPRLAWGVFFTALGAAIGSYSVLFVKDEQLKLIILIFLTLTFLYT 118

Query: 142 LKRDRLYCERKFPD----NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
             R  L      P          I G+  GF  G LG G G F     +   G ++ KA 
Sbjct: 119 ALRPNLGKHESEPKIKNIKIFHLICGLTLGFYDGFLGPGTGSFWIFACVMLLGFNMRKA- 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S     L     ++      W    L  W++G       L++    +L   L +KL  
Sbjct: 178 --SINTKILNFTSNIIALAIFLWQYELL--WAVG-------LLMGVGQVLGAYLGSKLVL 226

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
               K++   F +++  T    A
Sbjct: 227 KTNGKFIKTLFLIVVGATIIKVA 249


>gi|294012755|ref|YP_003546215.1| putative permease [Sphingobium japonicum UT26S]
 gi|292676085|dbj|BAI97603.1| putative permease [Sphingobium japonicum UT26S]
          Length = 259

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 93/261 (35%), Gaps = 24/261 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + I  ++ A+ ++G +  + G GGGL+ +P L       GI        A+ T+    + 
Sbjct: 6   ETIAFLMAAALIAGCIDAMAG-GGGLIAMPALL----AAGIPPVA----AVATNKLQSSL 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  + + + R G +++K  +  IF     +V  + ++  VD S L        + +   
Sbjct: 57  GTFGACIAYARAGHMDLKAYRWPIFAAFAGSVGGAWLVQRVDPSILAGLMPALLIALAAY 116

Query: 141 MLKRDRLYC--ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATA 197
                ++      +        +   V GF  G  G G G F   + +   G  + +ATA
Sbjct: 117 FTFSPKVGEMDRHQRVGMVALSLLIGVIGFYDGFFGPGAGAFYATIFIALGGLGLVRATA 176

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +   +       L+  I              G V     L +   SI    + ++L+  
Sbjct: 177 QTKAANFASNLAGLVTMIAG------------GHVIWIVGLAMAVGSITGGQIGSRLAMR 224

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
            G + +     ++    +   
Sbjct: 225 FGSRLIRPLLIILSLALTAKM 245


>gi|284036368|ref|YP_003386298.1| hypothetical protein Slin_1449 [Spirosoma linguale DSM 74]
 gi|283815661|gb|ADB37499.1| protein of unknown function DUF81 [Spirosoma linguale DSM 74]
          Length = 254

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 96/263 (36%), Gaps = 25/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++   SF++G +  + G GGGL+  P +  +     +         +GT+       S
Sbjct: 6   VFILCGFSFVAGFVDAIIG-GGGLIQTPAILFSLPQYPVPTL------IGTTKVPSLSGS 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +M   ++ R   +  + +   + +    + + S  ++ V  +F+     +  + + I  L
Sbjct: 59  LMGAFQYSRRVAVVGRFIGPMMAIAFAASWLGSWTLTRVPNNFMKPLALVILIGVFIYTL 118

Query: 143 KRDRL-----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            +                    ++ G   GF  G  G G G F  L  +   G    KA 
Sbjct: 119 TKKDFGQVSHRVVTASQQRTRMWLMGGGIGFYDGFFGPGTGSFLVLGFITLIGFDFLKAN 178

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  V+A     + L              +  G +     L +   ++    L  +L+ 
Sbjct: 179 AHAKLVNASTNMASALFF------------FREGRILFTFALPMAVANLSGAFLGARLAI 226

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
           + G +++ + F +++  T   FA
Sbjct: 227 LKGNQFIRVFFLVLIAATILRFA 249


>gi|229077101|ref|ZP_04209806.1| hypothetical protein bcere0024_57350 [Bacillus cereus Rock4-18]
 gi|228706201|gb|EEL58485.1| hypothetical protein bcere0024_57350 [Bacillus cereus Rock4-18]
          Length = 252

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 106/265 (40%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  ++ + L+ + + L+G +  + G GGG++ +PV+            +   VA+ T+  
Sbjct: 2   NFTIELLILLFLVAILAGWIDTIAG-GGGMITIPVMLLV--------GMSPSVAIATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  ++M+ +   +   IN+K ++  I +    +++   +I  +   +L        ++
Sbjct: 53  QGSSGTLMATVIFIKKKEINLKEMRLSILMTFFGSILGGWLILQIRAEYLIMILPFLLII 112

Query: 137 MGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           +G+  L    +  E   RK              GF  G  G G G    L  +L  G S 
Sbjct: 113 IGLYFLLSPNIANEDRPRKISMLLFALTVAPFLGFYDGFFGPGTGSLIALAFILLCGYSA 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++    F ALL  I  G        W++G       LI++   I+ + +  
Sbjct: 173 TRATANAKILNFTSNFAALLYFIIFGQ-----IDWTIG-------LIMMLGQIIGSYIGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           K+    G   +     ++ F  +  
Sbjct: 221 KMVLTKGTSLIRPIVVIVCFVMAIK 245


>gi|327189202|gb|EGE56382.1| hypothetical conserved membrane protein [Rhizobium etli CNPAF512]
          Length = 261

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 86/249 (34%), Gaps = 27/249 (10%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G +  + G GGGL+ VP +  A    GI         +GT+       +  + + + R G
Sbjct: 20  GFVDAIAG-GGGLITVPAMLIA----GIPPLQT----LGTNKVQSIFGAASATLAYARKG 70

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
            + +        +  +   V + + + V    L     +  L + I    +  L    K 
Sbjct: 71  HVQLHEQLPMALMAVMGGAVGAALATIVPGQVLQAIMPVLLLAIAIFFAVKPNLNDLDKH 130

Query: 154 PDNYVKYIWGM----VTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
                 +++G+      G   G  G G G  F    +   G  + KATA +  ++     
Sbjct: 131 -RLITPFVFGLTLVPAIGLYDGVFGPGTGSFFMLAFVTLAGFGVLKATAHTKLLNFGSNL 189

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            AL+V              S G +     L++     L   L ++L+  IG K +     
Sbjct: 190 GALIVFA------------SFGAILWKIGLLMGVCQFLGAQLGSRLAMRIGAKLIKPLLV 237

Query: 269 MIMFTTSFV 277
           ++    +  
Sbjct: 238 IVCVALAVK 246


>gi|222478723|ref|YP_002564960.1| protein of unknown function DUF81 [Halorubrum lacusprofundi ATCC
           49239]
 gi|222451625|gb|ACM55890.1| protein of unknown function DUF81 [Halorubrum lacusprofundi ATCC
           49239]
          Length = 350

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 7/117 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +I   +F +G LSG  GVGGG + +P +  A         +   VA+GT L  I  + 
Sbjct: 186 VWVITAVAFSTGILSGFLGVGGGFIRMPAMIYAI-------GVPTPVAVGTDLFEIVFSG 238

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +    + + G +++ I+   +F   +   + S   + VD   +   F    L   +
Sbjct: 239 GIGSYLYGQSGGVDLGIVVPLLFGSALGARIGSAATAVVDADDIKVYFGGMLLAGSV 295



 Score = 42.8 bits (100), Expect = 0.056,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 85/258 (32%), Gaps = 58/258 (22%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
                VA+G+ +  +  T+V++ ++H   G ++ K+    I    +   V    + ++++
Sbjct: 49  GYPATVAVGSGMAFVFGTAVIATLKHHDLGQVDYKLGAIMIAGTTVGIEVGRASVFYLEE 108

Query: 124 SFLNKAFA----IFCLLMGILMLKR------------------------------DRLYC 149
             L         +F L    LM+ R                               ++  
Sbjct: 109 LGLADGIISVVYVFLLGGIGLMITRESLASDGGGGIDHDAAAAEDLSEYEIPDIAKKIQQ 168

Query: 150 ERKFP-----------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATA 197
             + P             +V       TG LSG LGVGGG      M++  G     A  
Sbjct: 169 TVRIPPMVTLRGDIRVSVWVITAVAFSTGILSGFLGVGGGFIRMPAMIYAIGVPTPVAVG 228

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T       I F   +     G           G V++G V+ +L  S L   + +  + +
Sbjct: 229 TDL---FEIVFSGGIGSYLYGQS---------GGVDLGIVVPLLFGSALGARIGSAATAV 276

Query: 258 IGKKYLTIGFSMIMFTTS 275
           +    + + F  ++   S
Sbjct: 277 VDADDIKVYFGGMLLAGS 294


>gi|48478318|ref|YP_024024.1| hypothetical protein PTO1246 [Picrophilus torridus DSM 9790]
 gi|48430966|gb|AAT43831.1| hypothetical membrane spanning protein [Picrophilus torridus DSM
           9790]
          Length = 333

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 57/298 (19%), Positives = 97/298 (32%), Gaps = 52/298 (17%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +S   ++     I++ S ++G +  L G+GGG V+VPVL+  +        I +  A G 
Sbjct: 1   MSIIFIIIKFLTIVIGSIIAGFIGSLTGLGGGTVLVPVLTLFY-------GIPIIFATGA 53

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA---- 129
           SL     TS  S   + R    N+KI         I  +V S+   ++    L+      
Sbjct: 54  SLISTIATSAGSASAYTRQKIANIKIGIGLEIATTIGAIVGSVTAVYIYDHKLDWIVYVI 113

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKY----------------------------I 161
           F I  L   I  ++R       K   ++                               I
Sbjct: 114 FGIVLLFSLIPTIRRIGSEEPIKMKPDWTTRLFQLTGKYYDSRLQKEISYQGVRWYLAEI 173

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
                G +SG LG+G G    L M +     +   T TS  +  + A     +       
Sbjct: 174 IMFFAGVISGLLGIGSGALKVLGMDWALNLPMKVTTTTSNFMIGITAATGSSIY------ 227

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 W  G++            ++ + L  K+   I  + +   F  I+       
Sbjct: 228 ------WYAGYIEPFIAAATAIGVLIGSFLGAKVLVRITNRNVRWVFFAILSFLGIEM 279



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +  F +G +SGL G+G G + V  +  A        ++ M V   TS  +I  T+     
Sbjct: 173 IIMFFAGVISGLLGIGSGALKVLGMDWAL-------NLPMKVTTTTSNFMIGITAATGSS 225

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +   G I   I       + I + + + ++  +    +   F      +GI M+ +
Sbjct: 226 IYWYAGYIEPFIAAATAIGVLIGSFLGAKVLVRITNRNVRWVFFAILSFLGIEMILK 282


>gi|75759861|ref|ZP_00739935.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74492631|gb|EAO55773.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 245

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 76/200 (38%), Gaps = 14/200 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++IV  F++  +  + G GGGL+ +P L            +    A+ T+        V
Sbjct: 1   MILIVFGFVAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTMGCV 51

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S +   R G +++K       +  I +++ +  +  ++   L     I   ++ I  + 
Sbjct: 52  TSNIVFYRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIYTIF 111

Query: 144 RDRL---YCERKFPDNYVKYIWGMVTGFL--SGALGVGGGIFTNLLMLFYGASIYKATAT 198
           +         +K    +V      +       G LG G G F    +LF G    KA  T
Sbjct: 112 KKDWGSISTHKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKAAGT 171

Query: 199 SAGVSALIAFPALLVRIYSG 218
           +  ++      ALL+ +Y G
Sbjct: 172 AKFLNLGSNVGALLMFMYVG 191



 Score = 35.4 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 49/120 (40%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G V  F+   +G GGG+     +LF G +   A AT+   S +    + +V    
Sbjct: 2   ILIVFGFVAAFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLASTMGCVTSNIVF--- 57

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    +  G +++ +   + PI+ + + +     +++  + L     +++   +  
Sbjct: 58  ---------YRSGNLDLKSAFKLFPITFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 108


>gi|317122559|ref|YP_004102562.1| hypothetical protein Tmar_1728 [Thermaerobacter marianensis DSM
           12885]
 gi|315592539|gb|ADU51835.1| protein of unknown function DUF81 [Thermaerobacter marianensis DSM
           12885]
          Length = 325

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 47/128 (36%), Gaps = 6/128 (4%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I   F+ G    L G GGG ++VPVL+  +               G SL V+A  ++  
Sbjct: 8   LIALGFVVGAFGTLIGAGGGFLLVPVLALLYPADDPGTL------TGISLLVVAVNALSG 61

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + + R G I+ +    +        ++ +   + + +        +  ++  + +L R 
Sbjct: 62  SVAYARMGRIDFRAGAWFAVAAVPGAILGAWASTLMSRRVFEALLGMLMVVAAVWLLSRA 121

Query: 146 RLYCERKF 153
                   
Sbjct: 122 HRPAAAGM 129



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 9/118 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +  SFL G +S L G+GGG++ VP+L              +HVA  TS  V+A T     
Sbjct: 209 MALSFLVGVVSSLLGIGGGIIHVPLLVTLL-------DYPVHVATATSHFVLALTGWAGV 261

Query: 87  MEHRRHGTINMKILKD--WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             H   GT +  + +       +     + +++   VD  ++ +  A   LL G+ +L
Sbjct: 262 AVHAWAGTYHHGLRRAALLATGVIPGAQLGAVLSRRVDDRWILRGLAFGLLLAGVRVL 319



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 11/119 (9%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
                + G +S  LG+GGGI    L+       ++ ATATS  V AL  +  + V  ++G
Sbjct: 209 MALSFLVGVVSSLLGIGGGIIHVPLLVTLLDYPVHVATATSHFVLALTGWAGVAVHAWAG 268

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              +GL   +L          +    I    L   LS  +  +++  G +  +      
Sbjct: 269 TYHHGLRRAAL----------LATGVIPGAQLGAVLSRRVDDRWILRGLAFGLLLAGVR 317


>gi|300115520|ref|YP_003762095.1| hypothetical protein Nwat_3053 [Nitrosococcus watsonii C-113]
 gi|299541457|gb|ADJ29774.1| protein of unknown function DUF81 [Nitrosococcus watsonii C-113]
          Length = 251

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 95/258 (36%), Gaps = 25/258 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + + S L+   S   G G GLV +P L       GI        A+ T         + +
Sbjct: 9   LFLISLLANLFSAFSGGGAGLVQLPALIFLGLPFGI--------ALATHKVASVALGIGA 60

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + H R  T+  +     +       ++ + +I  +       A     L +G+    + 
Sbjct: 61  TLRHLREETLERRFALFILAWGLPGVILGANVILKIPTRTAEFALGCLTLSLGVYSFLKP 120

Query: 146 RLYCERKFPDNYVK-YIWG----MVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATS 199
            L       + + + Y+ G       G L+G+L  G G+F  L ++ ++G    +A A +
Sbjct: 121 NLGQAPHLLNRHWRGYLVGGGTLFFIGILNGSLTSGTGLFVTLWLVRWFGLDYKRAVAYT 180

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +         +   ++G G   L    LG +    +  +L  S+L   L   LS + G
Sbjct: 181 LAL---------VGLFWNGAGALTL--GWLGNIQWTWLPALLIGSLLGGYLGAHLSIVKG 229

Query: 260 KKYLTIGFSMIMFTTSFV 277
            +++  GF ++       
Sbjct: 230 NRWIKRGFEIVTLLIGLK 247


>gi|148995070|ref|ZP_01823998.1| hypothetical protein CGSSp9BS68_00267 [Streptococcus pneumoniae
           SP9-BS68]
 gi|168486348|ref|ZP_02710856.1| putative domain of unknown function [Streptococcus pneumoniae
           CDC1087-00]
 gi|168488489|ref|ZP_02712688.1| putative domain of unknown function [Streptococcus pneumoniae
           SP195]
 gi|194398014|ref|YP_002038397.1| hypothetical protein SPG_1693 [Streptococcus pneumoniae G54]
 gi|225859568|ref|YP_002741078.1| domain of unknown function, putative [Streptococcus pneumoniae
           70585]
 gi|237649823|ref|ZP_04524075.1| hypothetical protein SpneC1_03689 [Streptococcus pneumoniae CCRI
           1974]
 gi|237820750|ref|ZP_04596595.1| hypothetical protein SpneC19_00190 [Streptococcus pneumoniae CCRI
           1974M2]
 gi|147926882|gb|EDK77932.1| hypothetical protein CGSSp9BS68_00267 [Streptococcus pneumoniae
           SP9-BS68]
 gi|183570565|gb|EDT91093.1| putative domain of unknown function [Streptococcus pneumoniae
           CDC1087-00]
 gi|183572598|gb|EDT93126.1| putative domain of unknown function [Streptococcus pneumoniae
           SP195]
 gi|194357681|gb|ACF56129.1| hypothetical protein SPG_1693 [Streptococcus pneumoniae G54]
 gi|225721650|gb|ACO17504.1| domain of unknown function, putative [Streptococcus pneumoniae
           70585]
 gi|301794772|emb|CBW37226.1| putative membrane protein [Streptococcus pneumoniae INV104]
 gi|332072624|gb|EGI83107.1| hypothetical protein SPAR50_1796 [Streptococcus pneumoniae GA17570]
 gi|332201214|gb|EGJ15285.1| hypothetical protein SPAR120_1721 [Streptococcus pneumoniae
           GA47901]
          Length = 256

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 79/212 (37%), Gaps = 16/212 (7%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM----ISHVDKS 124
           +A  +S  V     + +     +   I  +++    F   +   +  L+    +S +   
Sbjct: 43  IAFYSSFSVFIMAIISTIKRFSQSKEIKWRLIFTVSFSSVLGGFLGHLIFQVLLSQLSVR 102

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-L 183
            ++    I   +M ++           +F       I G++ G +S  LG+GGG     L
Sbjct: 103 LVSIVQMILLFVMLLVSFVLTDFKKTYQFDKIGFYMICGLLLGLISSFLGIGGGPLNVSL 162

Query: 184 LMLFYGASIYKATATSAGVSALIAFPA-LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           LM+F+  SI +AT  S  +           + + +G     L P          V +I  
Sbjct: 163 LMVFFSISIKEATMYSLAIIFFSQLSHLATIVVVTGLNQYHLAP----------VPVIFL 212

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            SI    L T +S ++ + ++   F  ++F  
Sbjct: 213 ASICGGVLGTVVSKVLPENWVRYCFKGMLFFV 244


>gi|298242372|ref|ZP_06966179.1| protein of unknown function DUF81 [Ktedonobacter racemifer DSM
           44963]
 gi|297555426|gb|EFH89290.1| protein of unknown function DUF81 [Ktedonobacter racemifer DSM
           44963]
          Length = 444

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 77/239 (32%), Gaps = 44/239 (18%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP+L+  F+L        +  A+G S+  +  TS  +   + R    N++I        
Sbjct: 194 IVPLLTLVFKL-------PVTFAIGASIISVIATSSGAAAAYVRDRLTNLRIGMFLEIAT 246

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK------------------------ 143
            I  +  + +   +    LN  F +  LL    ++                         
Sbjct: 247 TIGAISGAFLAGVLAPHLLNIIFGVILLLSAAPLVVEIGEDTPQGVKNDRLATWLHLSST 306

Query: 144 ----RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATAT 198
               +       +            V G +SG LG+G G F  + +       I  +T T
Sbjct: 307 YPDHKLGKDVAYQVTRTPWGLAMMYVAGLISGLLGIGSGTFKVIALDTLMRLPIKVSTTT 366

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           S  +  + A  +  +    G     +PP     V     L IL  +++   L   +S  
Sbjct: 367 SNFMIGVTAAASAGIYFLRG----DIPPL----VAAPVALGILVGALVGARLLASISNK 417



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 7/113 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           +++G +SGL G+G G   V  L    +L        + V+  TS  +I  T+  S   + 
Sbjct: 331 YVAGLISGLLGIGSGTFKVIALDTLMRL-------PIKVSTTTSNFMIGVTAAASAGIYF 383

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
             G I   +       + +  +V + +++ +    L   F +  L+  I M+ 
Sbjct: 384 LRGDIPPLVAAPVALGILVGALVGARLLASISNKLLRLIFLLVLLVSAIEMIL 436


>gi|193213378|ref|YP_001999331.1| hypothetical protein Cpar_1739 [Chlorobaculum parvum NCIB 8327]
 gi|193086855|gb|ACF12131.1| conserved hypothetical protein [Chlorobaculum parvum NCIB 8327]
          Length = 120

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 11/125 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPT 81
           + ++ +    +G LSG+FGVGGG+++VP L   F        +    A GTSL  ++ P 
Sbjct: 3   LIMLFIIGLAAGLLSGMFGVGGGVIIVPALVFFF-------GMNQQAANGTSLIALLLPV 55

Query: 82  SVMSFMEHRRHGTINMKILK---DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            ++  +E+ R G I M+ +       F L       + +   V    L + FA+F + + 
Sbjct: 56  GLLGVLEYYRSGNIAMQNIWFGLTIAFGLFAGAFFGAHLAIEVSSELLRRMFAVFLVFVA 115

Query: 139 ILMLK 143
           I +  
Sbjct: 116 IRLWL 120



 Score = 38.5 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 46/121 (38%), Gaps = 9/121 (7%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIY 216
           + +I G+  G LSG  GVGGG+     ++ F+G +   A  TS          ALL+ + 
Sbjct: 5   MLFIIGLAAGLLSGMFGVGGGVIIVPALVFFFGMNQQAANGTS--------LIALLLPVG 56

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
               L      ++   NI   L I             L+  +  + L   F++ +   + 
Sbjct: 57  LLGVLEYYRSGNIAMQNIWFGLTIAFGLFAGAFFGAHLAIEVSSELLRRMFAVFLVFVAI 116

Query: 277 V 277
            
Sbjct: 117 R 117


>gi|332183990|gb|AEE26244.1| membrane protein [Francisella cf. novicida 3523]
          Length = 280

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/277 (17%), Positives = 96/277 (34%), Gaps = 25/277 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  +I + + L G +  + G+GGGLV+ P+L+           + +H A+G SL  I 
Sbjct: 5   LFFELVIFIVAVLGGGIGAVIGLGGGLVITPLLTTIL-------GVPLHYAIGASLVAII 57

Query: 80  PTSVM-SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            TS   S +  + HG    K+         +  +  + +   +    L   F    +L+ 
Sbjct: 58  CTSTATSLVSLKSHGLTKEKLGLFLALATAVGAIFGAKLAVMLGAKILFLIFGGILILVA 117

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALG----------VGG-----GIFTNL 183
           IL   + +   +   P         +         G          + G     G     
Sbjct: 118 ILSFIKKKSITDNTKPIKQSFIANKLQLNDSVVIAGQKQNYNVNHPILGFIFMAGAGFIG 177

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP--WSLGFVNIGAVLIIL 241
            +L  GA I+K  A    +       A       G          +  G+++      + 
Sbjct: 178 GLLGIGAGIFKVVAMDKIMKIPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSITAAVA 237

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             ++L   + +KL   I  K L + F +++F ++   
Sbjct: 238 LGTLLGATIGSKLMPNIPTKALRLMFFIVVFISAIQM 274



 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I   V+  TS  ++  T+  +   +   G I+  I         +   + S ++ ++   
Sbjct: 198 IPFRVSASTSNFIMGVTAFAATSTYYFAGYIDSSITAAVALGTLLGATIGSKLMPNIPTK 257

Query: 125 FLNKAFAIFCLLMGILMLKR 144
            L   F I   +  I M+ +
Sbjct: 258 ALRLMFFIVVFISAIQMIIK 277


>gi|27376265|ref|NP_767794.1| hypothetical protein bll1154 [Bradyrhizobium japonicum USDA 110]
 gi|27349405|dbj|BAC46419.1| bll1154 [Bradyrhizobium japonicum USDA 110]
          Length = 380

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 46/115 (40%), Gaps = 8/115 (6%)

Query: 9   SLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMH 68
           S+ ++L    +   + L++      G +SG+FG+GGG +M P+L            I   
Sbjct: 75  SMQLYLPIADLPVNVFLVLAMGAAVGFVSGMFGIGGGFLMTPLLIFI--------GITPA 126

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           VA+ +    IA +S    + + R   I+  +    +      T +     + +  
Sbjct: 127 VAVASVASHIAASSFSGAISYWRRRAIDPALASVLLCGGVTGTALGVWTFTQLRA 181



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 27/58 (46%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
           ++    G   GF+SG  G+GGG     L++F G +   A A+ A   A  +F   +  
Sbjct: 90  FLVLAMGAAVGFVSGMFGIGGGFLMTPLLIFIGITPAVAVASVASHIAASSFSGAISY 147


>gi|261402192|ref|YP_003246416.1| protein of unknown function DUF81 [Methanocaldococcus vulcanius M7]
 gi|261369185|gb|ACX71934.1| protein of unknown function DUF81 [Methanocaldococcus vulcanius M7]
          Length = 260

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 81/203 (39%), Gaps = 17/203 (8%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD----KS 124
           +A+GT L   A T  +    H + G ++  I     F      ++ ++++  V+     S
Sbjct: 49  IAIGTDLLYAAITKGLGAYFHNKKGNVDKNIALKLFFGSFPAIILGAIILRVVNRDEINS 108

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL- 183
            L    +I  +L  I+ LK++  Y  RK   + +   +G + G +     +G G+     
Sbjct: 109 LLTIMLSIILILTSIINLKKEFFYSYRKKCSSKILLFFGFIVGLVVQFTSIGSGVLITFA 168

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           LM F   S  +   TS     L+ F + L  +            SLG V+    L+++  
Sbjct: 169 LMNFTDLSSREIIGTSLFYGLLLTFFSSLNYM------------SLGNVDYMLALLLILG 216

Query: 244 SILITPLATKLSYMIGKKYLTIG 266
           ++    L + ++  I  K L   
Sbjct: 217 TVPGVYLGSIINSKIKPKNLRKI 239



 Score = 37.7 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 7/107 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++   F+ G +     +G G+++       F LM     +     +GTSL      +  
Sbjct: 142 ILLFFGFIVGLVVQFTSIGSGVLIT------FALMNFT-DLSSREIIGTSLFYGLLLTFF 194

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
           S + +   G ++  +    I        + S++ S +    L K  +
Sbjct: 195 SSLNYMSLGNVDYMLALLLILGTVPGVYLGSIINSKIKPKNLRKIIS 241


>gi|154685676|ref|YP_001420837.1| YjnA [Bacillus amyloliquefaciens FZB42]
 gi|154351527|gb|ABS73606.1| YjnA [Bacillus amyloliquefaciens FZB42]
          Length = 254

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 97/268 (36%), Gaps = 36/268 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I+   F  GTL GL GVGG  ++ P+L       GI+ S    +A+GT L   + T +  
Sbjct: 5   IVFMGFFVGTLVGLTGVGGAALLTPLLIVL----GINPS----IAVGTDLLYNSITKLFG 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + H +  T+  K++         +      ++             + +A      L+ I
Sbjct: 57  VVSHWKQRTVQFKLVGYLALGSIPSATAAIGVLHLFPAFHQHQEQIIKQALGYVLTLVAI 116

Query: 140 LM---------LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YG 189
            +         L+ +R   +       +  + G++ GF+ G   +G G    + ML+ + 
Sbjct: 117 SIIARLFFDKKLRPNRWQQKTLEEKRTLMILIGVIFGFIVGLTSIGSGSLFAIAMLYLFR 176

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
               +   T    + L+   A            GL   S G V+   VL +L  S+    
Sbjct: 177 MKTAEVVGTDIAHAFLLVTAA------------GLLNASFGSVDYLLVLNLLIGSVPGVL 224

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L +  S     + L    + I+  +   
Sbjct: 225 LGSFFSPKFSPRPLQFVMAAIILISGIK 252



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 46/129 (35%), Gaps = 7/129 (5%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
             +  + +   L+I+   + G + GL  +G G +    +   F+       +     +GT
Sbjct: 133 WQQKTLEEKRTLMILIGVIFGFIVGLTSIGSGSLFAIAMLYLFR-------MKTAEVVGT 185

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            +         + + +   G+++  ++ + +       ++ S          L    A  
Sbjct: 186 DIAHAFLLVTAAGLLNASFGSVDYLLVLNLLIGSVPGVLLGSFFSPKFSPRPLQFVMAAI 245

Query: 134 CLLMGILML 142
            L+ GI ++
Sbjct: 246 ILISGIKLI 254


>gi|145640905|ref|ZP_01796487.1| 50S ribosomal protein L17 [Haemophilus influenzae R3021]
 gi|145274419|gb|EDK14283.1| 50S ribosomal protein L17 [Haemophilus influenzae 22.4-21]
          Length = 257

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 89/244 (36%), Gaps = 12/244 (4%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF-MEHRRHGT 94
           +S +FG+GGG++MVP+L   F        + + V   TSL ++  T++++    H++   
Sbjct: 2   VSAIFGIGGGVLMVPILRTLF------PELPIQVISATSLTIVMCTALINLLFFHKQKIK 55

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
           I+   +  W   + I   +   +  +   + ++  F +    + I             F 
Sbjct: 56  IDYINIILWSIAMVIGVQIGFELSFYFSTAIISLIFTVSLSALAIKTFLNRSRIQIEVFN 115

Query: 155 DNYVKYIWGMVT-----GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
            + ++   G ++              GG I   L+    G    +    +  +  +    
Sbjct: 116 MSPIERAKGSISFCGGGLIAGITGIGGGSILAPLVGQLKGVKTQQIAVYTNYMMIIGGIG 175

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            L   +   +  +      LG+VN   V ++   S  ++  + KL  ++         ++
Sbjct: 176 NLYGYLTRAFPYDISLSGQLGYVNFLVVGVVTLGSFGMSFFSMKLRGLMNPVLTRKLLAI 235

Query: 270 IMFT 273
           I   
Sbjct: 236 IFIL 239


>gi|297563849|ref|YP_003682822.1| protein of unknown function DUF81 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848298|gb|ADH70316.1| protein of unknown function DUF81 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 319

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 74/208 (35%), Gaps = 15/208 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+ +A F +  + G  G+  G+     L   F       S  +H+A          T+
Sbjct: 4   LVLLAIAGFFAQLVDGSLGMAYGVTST-TLLLLFGTNPAAASATVHLAE-------IGTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S + H + G ++ K+++       I +   +  +S +         +   L +G+ +L
Sbjct: 56  LASGVSHWKLGNVDWKVVRRIALPGAIGSFAGATFLSWLSTEAAAPIMSGILLALGLYIL 115

Query: 143 KRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKAT 196
            R   +        K          G+V GF+    G G G      +L  G     K  
Sbjct: 116 IRFTAWGTPTRNLDKPLRRRFLTPLGLVGGFVDATGGGGWGPVGTPALLASGRMEPRKVV 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGL 224
            T      ++A  A L  +  G G  G+
Sbjct: 176 GTIDTSEFIVALAASLGFLV-GLGAAGI 202


>gi|28871678|ref|NP_794297.1| hypothetical protein PSPTO_4544 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28854930|gb|AAO57992.1| membrane protein, putative [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 266

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/273 (17%), Positives = 99/273 (36%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +VA  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 13  FVVAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGG 64

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + HR++  I+ K+            ++T   +S +        + + +A     LL  +
Sbjct: 65  VLVHRKNDNIDWKVTGLLTLGSVPAVLLTLWFLSTLHTAPDALNAIIKQALGYVLLLTAL 124

Query: 140 LMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + +L                     +  + G++ G +     +G G      L +L
Sbjct: 125 AVLFKKKLLAFAHGRGDGQSFFSGTSLTMLTVVTGLILGTMVALTSIGAGALGTVALFIL 184

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +              + GL   S+G +N   +  +L  S+ 
Sbjct: 185 YPLLPTRRLVGTEIAHAVPLTL------------VAGLGHASMGNMNWELLGWLLMGSLP 232

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + ++  +    L    ++++    F  A
Sbjct: 233 GIYLGSHMAGRVSDDLLRPFLAIMLGMIGFKLA 265



 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +V   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 153 MLTVVTGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAVPLTL 206

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G +N ++L   +        + S M   V    L    AI   ++G  +  
Sbjct: 207 VAGLGHASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDDLLRPFLAIMLGMIGFKLAF 266



 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                 + G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 9   GGLGFVVAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 66


>gi|329754330|gb|AEC03563.1| magnetosome protein MamO [alpha proteobacterium KR-1]
          Length = 587

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 67/218 (30%), Gaps = 48/218 (22%)

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + +   +    +K  I       V+   + + +  S +     +F L+M    + 
Sbjct: 377 AAALRNDKAQLVQWDKVKPLIPWGVAGVVIGYFIGNAIGDSVVGVLLGLFALIMAGKAVL 436

Query: 144 -----------------------------------RDRLYCERKFPDNYVKYIWGMVTGF 168
                                              R +              + G+  G 
Sbjct: 437 EILQPNAGEDTAEAIAAAEAGDEMDELMALAEGTTRPKTSGIALPEGPTRSAVLGLPMGL 496

Query: 169 LSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            SG LG+ GG+    L  + G  S+  A A S+ +    +    +V    G         
Sbjct: 497 FSGILGISGGVIEVPLQRYIGRISLQNAIANSSVLVFWASVAGSVVAFIHG--------G 548

Query: 228 SLGFVNIGA----VLIILPISILITPLATKLSYMIGKK 261
           + G ++  A     L+++P + +   L  +L  ++  +
Sbjct: 549 TTGLIHWEAPVTLALVMIPGAYVGGILGARLMRVLPVR 586



 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 11/99 (11%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V     G  SG+ G+ GG++ VP+             I +  A+  S  ++   SV   
Sbjct: 488 AVLGLPMGLFSGILGISGGVIEVPLQRYI-------GRISLQNAIANSSVLVFWASVAGS 540

Query: 87  MEHRRHGT----INMKILKDWIFVLPITTVVTSLMISHV 121
           +    HG     I+ +       V+     V  ++ + +
Sbjct: 541 VVAFIHGGTTGLIHWEAPVTLALVMIPGAYVGGILGARL 579


>gi|218674616|ref|ZP_03524285.1| hypothetical protein RetlG_25707 [Rhizobium etli GR56]
          Length = 262

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/275 (18%), Positives = 97/275 (35%), Gaps = 38/275 (13%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  L  ++    G L G+ GVGGG +M P+L   F        +    A+GT L   A
Sbjct: 1   MTFEPLYSISGLFVGALVGITGVGGGSLMTPLLVLLF-------GVHPATAVGTDLLYAA 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIF 133
            T       H  HG IN KI+           V+   +++ VD       + +  A    
Sbjct: 54  ITKTAGTAVHGMHGRINWKIVGSLAAGSVPAAVLMLWLLAGVDRKSIGVTNTITVALGWL 113

Query: 134 CLLMGILMLKR-------DRLYCERKFPDNY----VKYIWGMVTGFLSGALGVGGGIFTN 182
            ++  I+++ R        R   +R  P       +  I G   G L     VG G    
Sbjct: 114 LVMTAIMLVFRGSILELARRAIGDRTPPQPATILILTVILGFCLGILVTLTSVGAGALGV 173

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
            ++L      ++ +   +    +  +     +              W +G ++   +  +
Sbjct: 174 TILLVLYPRLNVREIVGSDIVHAVPLTLIGGMGY------------WLIGEIDWAMLFAL 221

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           L  SI    + + L+  + ++ + I  +  +   +
Sbjct: 222 LVGSIPGIIIGSLLAPKLHERTIRIVLAATLAVVA 256



 Score = 37.4 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 48/122 (39%), Gaps = 6/122 (4%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + L ++  F  G L  L  VG G + V +L   +  + + +       +G+ +    P
Sbjct: 145 TILILTVILGFCLGILVTLTSVGAGALGVTILLVLYPRLNVREI------VGSDIVHAVP 198

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +++  M +   G I+  +L   +       ++ SL+   + +  +    A    ++   
Sbjct: 199 LTLIGGMGYWLIGEIDWAMLFALLVGSIPGIIIGSLLAPKLHERTIRIVLAATLAVVAGK 258

Query: 141 ML 142
           +L
Sbjct: 259 LL 260


>gi|83313505|ref|YP_423769.1| permease [Magnetospirillum magneticum AMB-1]
 gi|82948346|dbj|BAE53210.1| Predicted permease [Magnetospirillum magneticum AMB-1]
          Length = 317

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 63/186 (33%), Gaps = 42/186 (22%)

Query: 52  LSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITT 111
           ++     +G+  +    VA+GT    I  +SV   + H R G +++K+         + +
Sbjct: 48  MTPLLIFLGVPPT----VAVGTEANQIVASSVSGVLAHWRRGNVDVKMGLILTLGGFVGS 103

Query: 112 VVTSLMISHVDK-----SFLNKAFAIFCLLMGILML------------------------ 142
            +   +   +         ++  + +F  ++G LML                        
Sbjct: 104 TLGVYVFKWLRGLGQIDLVISLLYIVFLGIVGSLMLVESIQALVASKRNGGNVPVRKKHQ 163

Query: 143 --------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIY 193
                    + R    + +    V    G++ G L+  +GVGGG      M++  G    
Sbjct: 164 HSWMHGLPFKMRFRRSQLYISAIVPAAIGLLVGILAALMGVGGGFIMVPAMIYLLGMPTA 223

Query: 194 KATATS 199
               TS
Sbjct: 224 VVVGTS 229



 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 8/119 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
                L G L+ L GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 189 AAIGLLVGILAALMGVGGGFIMVPAMIYLL-------GMPTAVVVGTSLFQIIFVTANAT 241

Query: 87  MEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                    +++ +    +    I   V +     +    L    A+  L + + +L  
Sbjct: 242 FLQSTMNHTVDVVLALLLLLGGVIGAQVGARFGVKLKGEQLRSLLALMVLGVCVKLLFD 300


>gi|294011138|ref|YP_003544598.1| putative permease [Sphingobium japonicum UT26S]
 gi|292674468|dbj|BAI95986.1| putative permease [Sphingobium japonicum UT26S]
          Length = 304

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 59/293 (20%), Positives = 101/293 (34%), Gaps = 56/293 (19%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +II    + G LSG+FGVGGG +  P+L       GI  ++        +   +   SV
Sbjct: 15  LVIIALGGVVGLLSGMFGVGGGFLTTPLLIF----YGIPPTVAAAS----AASQVTGASV 66

Query: 84  MSFMEHRRHGTINMK------------------ILKDWIFVLPITTVVTSLMISHVDKSF 125
                H   GT++ +                  I +    +  I TV+  L +  +    
Sbjct: 67  SGVFTHMARGTVDFRMGGVLIAGGVVGAGLGVLIFRMLQVIGQIDTVIGILYVLMLGGIG 126

Query: 126 LNKAFAIFCLLMGILMLKRDRLYCERKFP------------------DNYVKYIWGMVTG 167
           L  A      L+ +   ++ +    R  P                        + GM TG
Sbjct: 127 LLMAKESIQALVALKTGRKIQARKRRHHPLVAAMPMRWRFYRSGLYISPLAPLLLGMATG 186

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
            L+  LGVGGG      ML+  G +      TS      +     ++   +   ++ +  
Sbjct: 187 ILTMLLGVGGGFILVPAMLYLLGMTTQSVVGTSLFQILFVTMATTMMHAMTTHAVDLV-- 244

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                      L++L  S+    L T++S  I  +YL I  + I+   +   A
Sbjct: 245 ---------LALLLLIGSVTGAQLGTRISMTIRPEYLRILLAAIVLLVAARMA 288



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 46/126 (36%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++    +G L+ L GVGGG ++VP +            +     +GTSL  I   ++ + 
Sbjct: 179 LLLGMATGILTMLLGVGGGFILVPAMLYLL-------GMTTQSVVGTSLFQILFVTMATT 231

Query: 87  MEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H      +++ +    +        + + +   +   +L    A   LL+   M    
Sbjct: 232 MMHAMTTHAVDLVLALLLLIGSVTGAQLGTRISMTIRPEYLRILLAAIVLLVAARMALGL 291

Query: 146 RLYCER 151
               + 
Sbjct: 292 GFRPDE 297


>gi|257868810|ref|ZP_05648463.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
 gi|257802974|gb|EEV31796.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
          Length = 258

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 100/258 (38%), Gaps = 24/258 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +  +   L+ T+  + G+GGG+++ P+         I       ++  +++ V   + V 
Sbjct: 5   IYFIVIVLANTVGAVSGMGGGVLIKPIFDF------IGAHSVAAISFYSAVAVFTMSLVS 58

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-------DKSFLNKAFAIFCLLM 137
           +  +      IN +I+        +  V+ ++    +       D   + + F     L+
Sbjct: 59  TARQLASGHKINWQIVLWVSGGAILGGVLGNVAFDQLLLFFQNEDHVQMVQIFLTVVTLL 118

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKAT 196
                 +       +  +N+     G+V GFL+  LG+GGG     LLML +   I +AT
Sbjct: 119 FAFFYTKYDW-PGFQLKNNFWYCFCGLVLGFLASLLGIGGGPINVSLLMLMFALPIKEAT 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S           ++    +G    GL         +  +  ++P +I+   L  K+S 
Sbjct: 178 VYSICTIFFSQLAKIVT--IAGTTGFGLYD-------LKILWFVIPAAIVGGLLGAKVST 228

Query: 257 MIGKKYLTIGFSMIMFTT 274
           ++  + +T+ F  ++   
Sbjct: 229 VLSPQKVTLVFQTVILLV 246


>gi|149179369|ref|ZP_01857927.1| predicted Permease [Planctomyces maris DSM 8797]
 gi|148841805|gb|EDL56210.1| predicted Permease [Planctomyces maris DSM 8797]
          Length = 359

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 93/262 (35%), Gaps = 19/262 (7%)

Query: 8   FSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
            ++++       + +   I +A  L   ++G   +GGG V  PVL   F + G       
Sbjct: 28  LTILIATDGWQSLQHHWPIALAMALGSYIAGSTPMGGGTVGFPVLVLLFDMPGSLGRN-- 85

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL-MISHVDKSFL 126
               G ++  I   S  +         ++  +L+  +    I T + ++ +   V   ++
Sbjct: 86  ---FGLAVQSIGMVS-AAIYIFSARRPLDWGLLRPALVGALIGTPLGAVCVAPFVPDLWV 141

Query: 127 NKAFAIFCLLMGILMLKRDR-------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
              FA+     GI+ L + R       +    +  D  +    G+  G ++   GVG  +
Sbjct: 142 KLTFAVVWCSFGIMHLLKMRELVSATGVSDRWRTYDRLLGLAVGLSGGIVASITGVGIDM 201

Query: 180 FT-NLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG-FVNIGAV 237
                L+L Y A +  A  TS  + A  +   +   +       GL       + N  A 
Sbjct: 202 MVYATLVLLYRADLKIAIPTSVVIMAFASVVGITTNVILSHINPGLYYMDPEVYANWLAA 261

Query: 238 LIILPISILITPLATKLSYMIG 259
             I+    L  P    +  +I 
Sbjct: 262 APIVA---LGAPFGALVVNLIP 280


>gi|108758288|ref|YP_632944.1| hypothetical protein MXAN_4782 [Myxococcus xanthus DK 1622]
 gi|108462168|gb|ABF87353.1| putative membrane protein [Myxococcus xanthus DK 1622]
          Length = 280

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 8/115 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           +++GT+SG+ G+G G + VP +  A +L        + V+  TS  +I  T+  S   + 
Sbjct: 169 YVAGTVSGMLGIGSGALKVPAMDLAMRL-------PLKVSTATSNFMIGVTAAASAGVYF 221

Query: 91  RHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I+  I       + +   + S  +++ V+ ++L   F    L +   ML++
Sbjct: 222 ARGNIDPFIAGPVCVGVTLGAWLGSRHLMARVNSTWLRALFVGVLLWVAFEMLRK 276



 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 76/258 (29%), Gaps = 47/258 (18%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL+   +       + +  A+G S+  +  TS  +   + R    N ++          
Sbjct: 34  PVLTLLLK-------VDIQYAVGASIVSVIATSSGAAAAYVRDRMANTRVAMFLELATTA 86

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP--------------- 154
             +  + M   V    +   F        ++ML+R R   E   P               
Sbjct: 87  GALSGAFMSGLVGGRGVYLVFGGVMAWSALVMLRRMRASAETPVPADALADRLALHGSYW 146

Query: 155 -------------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSA 200
                                  V G +SG LG+G G      M L     +  +TATS 
Sbjct: 147 DESQGREVSYRVTRPLTGLGLMYVAGTVSGMLGIGSGALKVPAMDLAMRLPLKVSTATSN 206

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  + A  +  V    G            F+     + +   + L +     L   +  
Sbjct: 207 FMIGVTAAASAGVYFARGNIDP--------FIAGPVCVGVTLGAWLGSR---HLMARVNS 255

Query: 261 KYLTIGFSMIMFTTSFVF 278
            +L   F  ++   +F  
Sbjct: 256 TWLRALFVGVLLWVAFEM 273


>gi|34497056|ref|NP_901271.1| transmembrane protein [Chromobacterium violaceum ATCC 12472]
 gi|34102913|gb|AAQ59277.1| probable transmembrane protein [Chromobacterium violaceum ATCC
           12472]
          Length = 255

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 90/266 (33%), Gaps = 36/266 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             VA    G + GL GVGGG +M P+L       GI  +     A+GT L   A T    
Sbjct: 5   YTVAGLAVGFIVGLTGVGGGSLMTPILLW----FGISPAT----AVGTDLLYAAVTKAGG 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITT--VVTSLMISHVDKSFLNKAF----AIFCLLMGI 139
            + H R   I+ +I               +  L   HV    ++  F     +  LL   
Sbjct: 57  VVVHHRQRHIDWRITWHLSLGSVPAALLTLGLLSWLHVPAQVMDALFRFVLGLALLLTAF 116

Query: 140 LMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN--LLMLFYG 189
            +L +                    +   + G++ G L     +G G      L ML+  
Sbjct: 117 AILFKPWLLKVGGHHAAKLGADGRWWPTALVGVMLGVLVTLSSIGAGALGTLALFMLYPT 176

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
               +   T    +  +          +G G  G+     G ++   +L +L  S+    
Sbjct: 177 LPTSRLVGTEIAHAVPLTL-------VAGLGHAGM-----GHLDWMLLLKLLSGSLPGIW 224

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTS 275
           L ++L+  +   +L    ++++    
Sbjct: 225 LGSRLAGRLSDHWLRPALAVMLALVG 250



 Score = 37.4 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 26/56 (46%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
               + G+  GF+ G  GVGGG     ++L++G S   A  T    +A+     ++
Sbjct: 3   LGYTVAGLAVGFIVGLTGVGGGSLMTPILLWFGISPATAVGTDLLYAAVTKAGGVV 58



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 43/117 (36%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +   + G L  L  +G G +    L   +  +           +GT +    P ++++ 
Sbjct: 145 ALVGVMLGVLVTLSSIGAGALGTLALFMLYPTLPTSRL------VGTEIAHAVPLTLVAG 198

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + H   G ++  +L   +        + S +   +   +L  A A+   L+G  ++ 
Sbjct: 199 LGHAGMGHLDWMLLLKLLSGSLPGIWLGSRLAGRLSDHWLRPALAVMLALVGGKLVL 255


>gi|169832116|ref|YP_001718098.1| hypothetical protein Daud_1975 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638960|gb|ACA60466.1| protein of unknown function DUF81 [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 394

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 46/122 (37%), Gaps = 13/122 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++  F  G + G FG+GG  ++ P L+             M  A+GT +  IA  S+++
Sbjct: 15  LVMIGFCVGVIGGYFGIGGAFMVTPALNIF--------GFPMAYAIGTDMAHIAGKSIVA 66

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH-----VDKSFLNKAFAIFCLLMGIL 140
              H R G +++ I    I          + MI       +    +   +      + I 
Sbjct: 67  TFRHWRFGHVSIIIALLMIIGTFAGIEAGAQMIRWLTRLGIAGPVVRWIYIGILGFLAIY 126

Query: 141 ML 142
           M 
Sbjct: 127 MF 128



 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 31/100 (31%), Gaps = 12/100 (12%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
             +   + G   G + G  G+GG       +  +G  +  A  T     A  +  A    
Sbjct: 11  SPWPLVMIGFCVGVIGGYFGIGGAFMVTPALNIFGFPMAYAIGTDMAHIAGKSIVATFR- 69

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
                       W  G V+I   L+++  +        ++
Sbjct: 70  -----------HWRFGHVSIIIALLMIIGTFAGIEAGAQM 98



 Score = 38.1 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 30/97 (30%), Gaps = 7/97 (7%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L                VA+GT L  +  +       +   G + +K     +    
Sbjct: 204 VPALMYIV-------GTPTKVAVGTDLFEVMISGAYGAFSYSAKGAVELKAAVIMLLGAA 256

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
                 +L   +V   F+   FA+   L    ++ R 
Sbjct: 257 FGAQFGTLTTKYVYGLFIRFLFALTIALACTSVIMRQ 293


>gi|21673135|ref|NP_661200.1| hypothetical protein CT0296 [Chlorobium tepidum TLS]
 gi|21646211|gb|AAM71542.1| hypothetical protein CT0296 [Chlorobium tepidum TLS]
          Length = 138

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 56/130 (43%), Gaps = 11/130 (8%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-G 76
            ++    ++++    +G LSG+FGVGGG+++VP L            +    A  TSL  
Sbjct: 16  SIIMQYLILLITGIAAGLLSGMFGVGGGVIIVPALIFFL-------GMSQETASATSLIA 68

Query: 77  VIAPTSVMSFMEHRRHGTINMKILK---DWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           ++ P  ++   E+ + G I  + +         L       + +   +    L + FA+F
Sbjct: 69  LLLPVGLLGVYEYYQAGKITTEHIWFGLIIALGLFAGAFFGAKLAIELSNDLLRRMFAVF 128

Query: 134 CLLMGILMLK 143
            +L+ I +  
Sbjct: 129 LVLVAIRLWY 138



 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 7/121 (5%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
            +  I G+  G LSG  GVGGG+     ++F+          S   ++  +  ALL+ + 
Sbjct: 22  LILLITGIAAGLLSGMFGVGGGVIIVPALIFF-------LGMSQETASATSLIALLLPVG 74

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                       +   +I   LII            KL+  +    L   F++ +   + 
Sbjct: 75  LLGVYEYYQAGKITTEHIWFGLIIALGLFAGAFFGAKLAIELSNDLLRRMFAVFLVLVAI 134

Query: 277 V 277
            
Sbjct: 135 R 135


>gi|71737633|ref|YP_274804.1| hypothetical protein PSPPH_2610 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558186|gb|AAZ37397.1| membrane protein, putative [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 259

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 94/264 (35%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 9   LTTLAILAVVAFIAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     +    +     +++  ++   +LN+   +     G+
Sbjct: 60  FGSATASFTFYRRKLFHPRQWIHAVVGTAVGAAAGAVIAHYLPAEWLNQMLPVIVFGCGL 119

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G+  GF  G  G G G F T   +L Y   + KA
Sbjct: 120 YLLFGGTPKAPLDSNAPIKKKWQLPQGLGLGFYDGVAGPGTGAFWTVSTLLLYPVDLVKA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V I+SG             V+    L +    +L        +
Sbjct: 180 SGVARSMNFVSNAVALSVFIFSGQ------------VDYIIALSMGLAVMLGAYFGAGTA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 IKGGAKFIRPVFITVVLGLTVRLA 251


>gi|258649008|ref|ZP_05736477.1| putative membrane protein [Prevotella tannerae ATCC 51259]
 gi|260850627|gb|EEX70496.1| putative membrane protein [Prevotella tannerae ATCC 51259]
          Length = 278

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 58/288 (20%), Positives = 107/288 (37%), Gaps = 47/288 (16%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            VV +  LI++A++ +G L  L G+GGG+V++P L+  F        I  H A+G +L  
Sbjct: 2   TVVVFTLLILLAAYCAGLLGSLTGLGGGVVVIPFLTLGF-------GIDFHYAVGAALVS 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
              TS  S   + + G  N+++         +  V  + +   ++ S +   F  F L++
Sbjct: 55  TIATSSGSGSAYVKEGITNVRLGMFLEVATTVGAVTGAFVAVWLNSSVIAVIFG-FVLIL 113

Query: 138 GILMLKRDRLYCE--------------------------RKFPDNYVKYIWGMVTGFLSG 171
            ++M +R +L  E                           +  +         V G LSG
Sbjct: 114 TVIMQQRRKLDHEGVVGSDAARRLKLFGAWPQRDGTLKHYELRNVGGGLGVMYVAGILSG 173

Query: 172 ALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
            LG+G G+   + M          +T TS  +  + A  + +V +  G  L         
Sbjct: 174 VLGIGSGVLKVIAMDGIMKVPFKVSTTTSNFMMGVTACASAVVYVQRGIILPS------- 226

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            V    ++ +    +L      +L   +  K L   F   +   +   
Sbjct: 227 -VAFPTLIGV----LLGALTGARLLQSMNVKRLRQIFFFAILLVALNM 269



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 52/118 (44%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +   +++G LSG+ G+G G++ V  +    +       +   V+  TS  ++  T+  S 
Sbjct: 162 LGVMYVAGILSGVLGIGSGVLKVIAMDGIMK-------VPFKVSTTTSNFMMGVTACASA 214

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + + + G I   +    +  + +  +  + ++  ++   L + F    LL+ + ML  
Sbjct: 215 VVYVQRGIILPSVAFPTLIGVLLGALTGARLLQSMNVKRLRQIFFFAILLVALNMLYN 272


>gi|189499528|ref|YP_001958998.1| hypothetical protein Cphamn1_0555 [Chlorobium phaeobacteroides BS1]
 gi|189494969|gb|ACE03517.1| protein of unknown function DUF81 [Chlorobium phaeobacteroides BS1]
          Length = 408

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 51/123 (41%), Gaps = 9/123 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +    +  ++S   G+GGG + VP L+           + M + +GTS   +  + +
Sbjct: 282 LLAVAGGLVIASISSFLGIGGGFLYVPFLTAVI-------GLPMFIVVGTSALAVLLSMI 334

Query: 84  MSFMEH--RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            S   +   +   I+  ++   +  + +  ++      ++ + +L + F +  + +G+  
Sbjct: 335 TSIFSYVVLKGTFISWDLVGVEMVGVFVGAMIGPRTQKYIPEIWLKRLFVLLAVYVGLRY 394

Query: 142 LKR 144
             +
Sbjct: 395 FSK 397



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 41/125 (32%), Gaps = 11/125 (8%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLV 213
           +  +    G+V   +S  LG+GGG      +    G  ++    TSA    L    ++  
Sbjct: 280 NPLLAVAGGLVIASISSFLGIGGGFLYVPFLTAVIGLPMFIVVGTSALAVLLSMITSIFS 339

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            +               F++   V + +    +   +  +    I + +L   F ++   
Sbjct: 340 YVVLKGT----------FISWDLVGVEMVGVFVGAMIGPRTQKYIPEIWLKRLFVLLAVY 389

Query: 274 TSFVF 278
               +
Sbjct: 390 VGLRY 394


>gi|157415693|ref|YP_001482949.1| hypothetical protein C8J_1374 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157386657|gb|ABV52972.1| hypothetical protein C8J_1374 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307748334|gb|ADN91604.1| Membrane protein, putative [Campylobacter jejuni subsp. jejuni M1]
 gi|315930979|gb|EFV09954.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 254

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 92/263 (34%), Gaps = 28/263 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y  ++   +  +G +  + G GGGL+ +P L            I  H+++ T+       
Sbjct: 10  YYFILFFVALFAGFIDSIVG-GGGLITLPALIAC--------GIPAHLSLATNKLQSVFG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + + + +  T  +  L   +F   +   + S  +  V    L     IF  L  +  
Sbjct: 61  SFTATLTYFKSTT--LPHLAWGVFFTTLGAAIGSYSVLFVKDEQLKLIILIFLTLTFLYT 118

Query: 142 LKRDRLYCERKFPD----NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
             R  L      P          I G+  GF  G LG G G F     +   G ++ KA 
Sbjct: 119 ALRPNLGKHESEPKIKNIKIFHLICGLTLGFYDGFLGPGTGSFWIFACVMLLGFNMRKA- 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S     L     ++      W    L  W++G       L++    +L   L +KL  
Sbjct: 178 --SINTKILNFTSNIIALAIFLWQYELL--WAVG-------LLMGVGQVLGAYLGSKLVL 226

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
               K++   F +++  T    A
Sbjct: 227 KTNGKFIKTLFLIVVGATIIKVA 249


>gi|46201920|ref|ZP_00054109.2| COG0730: Predicted permeases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 308

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 87/264 (32%), Gaps = 53/264 (20%)

Query: 52  LSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITT 111
           ++     +G+  +    VA+GT    I  +SV   + H R G +++K+         + +
Sbjct: 39  MTPLLIFLGVPPT----VAVGTEANQIVASSVSGVLAHWRRGNVDVKMGLILTLGGFVGS 94

Query: 112 VVTSLMISHVDK-----SFLNKAFAIFCLLMGILML------------------------ 142
            +   +   +         ++  + +F  ++G LML                        
Sbjct: 95  TLGVYVFKWLRGLGQIDLVISLLYIVFLGIVGSLMLVESIQALMASKRNGGTVPVRKKHQ 154

Query: 143 --------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIY 193
                    + R    + +    V    G++ G L+  +GVGGG      M++  G    
Sbjct: 155 HSWMHGLPFKMRFRRSQLYISAIVPAAIGLLVGILAALMGVGGGFIMVPAMIYLLGMPTA 214

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
               TS  +  +I   A    + S              V++   L++L   ++   +  +
Sbjct: 215 VVVGTS--LFQIIFVTANATFLQSTMNHT---------VDVVLALLLLLGGVIGAQIGAR 263

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
               +  + L    ++++      
Sbjct: 264 FGVKLKGEQLRSLLALMVLAVCVK 287



 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 8/119 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
                L G L+ L GVGGG +MVP +            +   V +GTSL  I   +  + 
Sbjct: 180 AAIGLLVGILAALMGVGGGFIMVPAMIYLL-------GMPTAVVVGTSLFQIIFVTANAT 232

Query: 87  MEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                    +++ +    +    I   + +     +    L    A+  L + + +L  
Sbjct: 233 FLQSTMNHTVDVVLALLLLLGGVIGAQIGARFGVKLKGEQLRSLLALMVLAVCVKLLFD 291


>gi|330985290|gb|EGH83393.1| hypothetical protein PLA107_09708 [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 280

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 95/264 (35%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 30  LTTLAILAVVAFIAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 80

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     +    +     +++  ++   +LN+   +     G+
Sbjct: 81  FGSATASFTFYRRKLFHPRQWIHAVVGTAVGAAAGAVIAHYLPAEWLNQMLPVIVFGCGL 140

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G+  GF  G  G G G F T   +L Y   + KA
Sbjct: 141 YLLFGGTPKAPLDSNALIKKKWQLPQGLGLGFYDGVAGPGTGAFWTVSTLLLYPVDLVKA 200

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V I+SG        + +G       L +    +L        +
Sbjct: 201 SGVARSMNFVSNAVALSVFIFSGQ-----VDYIIG-------LSMGLAVMLGAYFGAGTA 248

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 249 IKGGAKFIRPVFITVVLGLTVRLA 272


>gi|326332008|ref|ZP_08198293.1| putative membrane protein [Nocardioidaceae bacterium Broad-1]
 gi|325950146|gb|EGD42201.1| putative membrane protein [Nocardioidaceae bacterium Broad-1]
          Length = 311

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 91/269 (33%), Gaps = 36/269 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++V SF  G + GL G+GGG +M P L       G+  +     A+   L   +    + 
Sbjct: 13  VLVVSFGIGIVVGLTGMGGGALMTPALIFL----GVPPT----TAVANDLVAASVNKSVG 64

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS---FLNKAFAIFCLLMGILML 142
              H RHG+ N+++    I        + + +          FL        L      +
Sbjct: 65  AAVHWRHGSPNIRLATYLIIGSVPCAFLGTFVHKLAPGDTDHFLKLVLGGALLFAAASYM 124

Query: 143 KR-----------DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI--FTNLLMLFYG 189
            R           +    E       +  + G + G L G   VG G      LL+++  
Sbjct: 125 FRMYLQLRLVTGGNEAPEEDPRLKPLLTVVIGALGGLLVGITSVGSGSVIMIALLLVYPT 184

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
            S  K   T    +  +   A + ++ +              V+   ++ ++      T 
Sbjct: 185 LSAVKLVGTDLLQAVPLVLAAAIGQVINHG------------VDWAVLIPLILGGTPGTF 232

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L ++++  + +  +  G  +++  +    
Sbjct: 233 LGSRMARWVSQSVIRRGIVIMLTLSGAKM 261



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +V   L G L G+  VG G V++  L   +       ++     +GT L    P  +
Sbjct: 150 LLTVVIGALGGLLVGITSVGSGSVIMIALLLVY------PTLSAVKLVGTDLLQAVPLVL 203

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            + +    +  ++  +L   I      T + S M   V +S + +   I   L G  ML
Sbjct: 204 AAAIGQVINHGVDWAVLIPLILGGTPGTFLGSRMARWVSQSVIRRGIVIMLTLSGAKML 262


>gi|320534835|ref|ZP_08035252.1| hypothetical protein HMPREF9057_03164 [Actinomyces sp. oral taxon
           171 str. F0337]
 gi|320132933|gb|EFW25464.1| hypothetical protein HMPREF9057_03164 [Actinomyces sp. oral taxon
           171 str. F0337]
          Length = 347

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 72/205 (35%), Gaps = 14/205 (6%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T++ S   H R G  + +++        +     + ++SH+         A   +L+G
Sbjct: 52  IGTTLASGASHWRLGNTDPRLVVRLGLPGAVGAFSGATVLSHLSTRAATPVTASLLILLG 111

Query: 139 ILMLKRDRLYC------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
             +L R  L         R      +    GMV GF+    G G G      +L  G + 
Sbjct: 112 AYVLGRFALRPPRGSGSRRSPHGRRLLVPLGMVGGFVDATGGGGWGPVVTTTLLTGGRTA 171

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +    S G S  +   A      +G G  G        +++G VL +L   ++  P++ 
Sbjct: 172 PRTVVGSVGASEFLVTVAASAGFLTGLGTAG--------ISLGIVLTLLAGGLVAAPVSA 223

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
            L   +    L      ++  T+  
Sbjct: 224 WLVSRLPGAVLGTAVGGLILATNLR 248


>gi|292492454|ref|YP_003527893.1| hypothetical protein Nhal_2418 [Nitrosococcus halophilus Nc4]
 gi|291581049|gb|ADE15506.1| protein of unknown function DUF81 [Nitrosococcus halophilus Nc4]
          Length = 266

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 102/279 (36%), Gaps = 45/279 (16%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  + G + GL GVGGG +M P+L   F   GI        A+GT L   A T +  
Sbjct: 5   YILAGLVVGFMVGLTGVGGGSLMTPLLIFGF---GIPPL----TAVGTDLLFAAFTKMGG 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIFCLLMGI 139
              H RH TI  +++          TV+   ++  +       +  +N A  I  +L  +
Sbjct: 58  IWAHWRHHTIQWRVVGLLALGSIPATVIALQILKLLQIRGVQLEGLINTALGIALVLTAL 117

Query: 140 LMLKRD---RLYCERKFPDNY---------------VKYIWGMVTGFLSGALGVGGGIFT 181
            +  +    R+  +   P +                   + G V GFL     +G G   
Sbjct: 118 ALPMKSWLQRIAEKDGLPRSLQPIYSLRWEPRFTTVSTVVMGAVLGFLVTLSSIGAGALG 177

Query: 182 NLLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            +++L+   G    +  AT    +  +   A +              W LG V++  +  
Sbjct: 178 AVVLLYLYPGLRTIQVVATDIAHAVPLTAIAGIG------------HWHLGSVDVALLGS 225

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +L  S+    + + +   I ++ +    + ++      F
Sbjct: 226 LLLGSLPGIYVGSHVGVNIPERAMQAALATLLMLVGIKF 264


>gi|229150692|ref|ZP_04278906.1| hypothetical protein bcere0011_22430 [Bacillus cereus m1550]
 gi|228632779|gb|EEK89394.1| hypothetical protein bcere0011_22430 [Bacillus cereus m1550]
          Length = 252

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 105/265 (39%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  ++ + L+ + + L+G +  + G GGG++ +P++            +   VA+ T+  
Sbjct: 2   DFTIELLILLFLVAVLAGWIDTIAG-GGGMITIPIMLLV--------GMSPSVAIATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  ++M+ +   +   IN+K ++  I +    +V    ++  +   +L        + 
Sbjct: 53  QGSSGTLMATVFFIKKKEINLKEMRLSILMTFFGSVFGGWLVLQIRAEYLIMILPFLLVF 112

Query: 137 MGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           +GI  L    +  E   RK            + GF  G  G G G    L  +L  G S 
Sbjct: 113 IGIYFLLSPNIANEDRPRKISMLLFALTVAPLLGFYDGFFGPGTGSLIALAFILLCGYSA 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++    F ALL  +  G        W++G       LI++   I+ + +  
Sbjct: 173 TRATANAKILNFTSNFAALLYFVIFGQ-----IDWTIG-------LIMMLGQIIGSYIGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           K+    G   +     ++ F  +  
Sbjct: 221 KMVLTKGTALIRPIVVIVCFVMAIK 245


>gi|332678680|gb|AEE87809.1| hypothetical protein FNFX1_1423 [Francisella cf. novicida Fx1]
          Length = 249

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 100/262 (38%), Gaps = 28/262 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +I+  F+ G   GL G GG ++ VP+L+           +  H A+  SL V+  T++ 
Sbjct: 2   FLIIFGFICGIALGLTGGGGSILAVPLLTY-------GVGLEFHSAVMISLLVVGFTAIF 54

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + +   I+       I    I   + S +   +    L  +F+I  +L+G+  L +
Sbjct: 55  GLIVNYKQRDIDYIAAVIMIITGVIFAPIGSYISQGLSDKLLMLSFSILMILIGVWSLVK 114

Query: 145 DRLYCERKFPDN--------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKA 195
            +L    +                I G + G L+G  GVGGG      ++F     I +A
Sbjct: 115 VKLMSGSEKSIYKNITPRFIVALLISGGIVGTLTGFFGVGGGFLIVPALVFITAMPIKRA 174

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TS  V  +++    +              +    +N     + +    +   LAT++ 
Sbjct: 175 INTSLLVIFVVSISGFIS------------HYDKTSMNWYIASMFIVGGAIGMFLATRVK 222

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
             +  K L   F++++     V
Sbjct: 223 KSLNDKVLQTIFAIMLVILGVV 244



 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 7/122 (5%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I  ++++  + GTL+G FGVGGG ++VP L           ++ +  A+ TSL VI   
Sbjct: 133 FIVALLISGGIVGTLTGFFGVGGGFLIVPALVFI-------TAMPIKRAINTSLLVIFVV 185

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+  F+ H    ++N  I   +I    I   + + +   ++   L   FAI  +++G+++
Sbjct: 186 SISGFISHYDKTSMNWYIASMFIVGGAIGMFLATRVKKSLNDKVLQTIFAIMLVILGVVI 245

Query: 142 LK 143
             
Sbjct: 246 YL 247


>gi|91975353|ref|YP_568012.1| hypothetical protein RPD_0873 [Rhodopseudomonas palustris BisB5]
 gi|91681809|gb|ABE38111.1| protein of unknown function DUF81 [Rhodopseudomonas palustris
           BisB5]
          Length = 339

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 7/170 (4%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L   F+  G+D  I         +    P    +       G     I+ + +     
Sbjct: 111 PLLISLFRFRGLDAVILNKAVSLVVVATALPFRASAVPLADVAG--EWPIILNLLAGSLA 168

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV---- 165
              + +   + +    L +  A+  + +  ++L    +             + G++    
Sbjct: 169 GAWIGAGWATRLQSQTLYRIIAVLLVAIAGVLLFAHDVVAGAPLFSGAALLLAGVIAGFV 228

Query: 166 TGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
            G ++  LGV GG      L+L +GA I  A + S  VS           
Sbjct: 229 IGVIASLLGVAGGEFLIPTLVLLFGADIKLAGSLSLAVSLPTMLVGFARY 278



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 8/93 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +   ++A F+ G ++ L GV GG  ++P L   F          + +A   SL V  PT
Sbjct: 218 LLLAGVIAGFVIGVIASLLGVAGGEFLIPTLVLLFGAD-------IKLAGSLSLAVSLPT 270

Query: 82  SVMSFMEHRRHGTIN-MKILKDWIFVLPITTVV 113
            ++ F  +    + + + + K ++ V+   ++V
Sbjct: 271 MLVGFARYSLDDSFSVIGLNKAFLLVMAAGSIV 303


>gi|224824502|ref|ZP_03697609.1| protein of unknown function DUF81 [Lutiella nitroferrum 2002]
 gi|224602995|gb|EEG09171.1| protein of unknown function DUF81 [Lutiella nitroferrum 2002]
          Length = 253

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 87/260 (33%), Gaps = 31/260 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG---IDDSICMHVAMGTSLGVIA 79
           + L+   +F +G +    G GGGL+ +P L      +    +  +  +  A GTSL    
Sbjct: 4   LTLLCGFAFCAGLIDAAVG-GGGLIQIPALFNILPAVPSATLLGTNKLASASGTSLA--- 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                          I   ++            + +  +S V  + L     +  + M +
Sbjct: 60  ------ARSFIGRVAIPWSLVLPAALSAFAMAFLGAAAVSAVPTAVLRPLVLVLIVAMAL 113

Query: 140 LMLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
               +      R+          +  + G   GF  G  G G G F   L +        
Sbjct: 114 YTFFKKDFGAVRRPLSVGWRERLLSLLVGGAIGFYDGLFGPGTGSFLIFLFIRCFAFDFL 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +A+A++  V+      AL   + +G  L G+               +   +++   + T+
Sbjct: 174 QASASAKLVNLATNIAALCFFVPTGKVLYGV------------AAPMALSNMVGAWVGTR 221

Query: 254 LSYMIGKKYLTIGFSMIMFT 273
           ++   G  ++ + F  ++  
Sbjct: 222 IAMKRGTAFIRMLFLCLLAI 241


>gi|227512813|ref|ZP_03942862.1| possible permease [Lactobacillus buchneri ATCC 11577]
 gi|227084013|gb|EEI19325.1| possible permease [Lactobacillus buchneri ATCC 11577]
          Length = 245

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 1/150 (0%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A  TSL    P  V+    H R G +        +      TV+ SL+   +  +    A
Sbjct: 42  AAATSLFTALPALVVGTYSHYRTGNMKFSYGSKLLITALPATVIGSLVSGVIPVTLYTWA 101

Query: 130 FAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
            AI   ++G+  L+R  +          +  Y++G ++G + G  G+ GG      +L  
Sbjct: 102 IAIILFVLGVQTLRRSFKGKPSSSNLKPWTVYLFGALSGLMVGIAGLSGGGPVMAGLLLL 161

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSG 218
           G ++ +A ATS+     ++   L+     G
Sbjct: 162 GLNMPQAAATSSYTLIALSIIGLIFHSTQG 191


>gi|134102138|ref|YP_001107799.1| hypothetical protein SACE_5689 [Saccharopolyspora erythraea NRRL
           2338]
 gi|291007611|ref|ZP_06565584.1| hypothetical protein SeryN2_24054 [Saccharopolyspora erythraea NRRL
           2338]
 gi|133914761|emb|CAM04874.1| protein of unknown function DUF81 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 302

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 87/260 (33%), Gaps = 22/260 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L  +  F++  + G  G+  G+    +L  A         +   +A  +       TS
Sbjct: 4   FLLFAIGGFVAQLVDGSLGMAYGVTSTTILLTA--------GLTPALASASVHLAEIGTS 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS----FLNKAFAIFCLLMG 138
           V+S   H + G ++ K++        I   + +  +S++       ++          + 
Sbjct: 56  VVSGASHWKFGNVDWKMVLLLGVPGAIGAFLGATALSNLSTEAAEPWMAAILFALGFYVA 115

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATA 197
           +    R     +       +    G+V GF+    G G G  +   +L  G     K   
Sbjct: 116 LKFALRPVRRRQLTGVSPKLLAPLGLVAGFVDATGGGGWGPVSTPTLLSTGKIEPRKVIG 175

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +      L+A  A +  + S               +   V  +L   ++  PLA  L  +
Sbjct: 176 SVDTSEFLVALAASVGFLTSLSDQK---------FSWTTVAALLLGGVIAAPLAAYLVRI 226

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           +  + + +G   ++  T+  
Sbjct: 227 VPMRLIGVGAGGLIVLTNAR 246


>gi|208779629|ref|ZP_03246974.1| conserved hypothetical membrane protein [Francisella novicida FTG]
 gi|208744590|gb|EDZ90889.1| conserved hypothetical membrane protein [Francisella novicida FTG]
          Length = 249

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 100/262 (38%), Gaps = 28/262 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +I+  F+ G   GL G GG ++ VP+L+           +  H A+  SL V+  T++ 
Sbjct: 2   FLIIFGFICGIALGLTGGGGSILAVPLLTY-------GVGLEFHSAVMISLLVVGFTAIF 54

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + +   I+       I    I   + S +   +    L  +F+I  +L+G+  L +
Sbjct: 55  GLIVNYKQRDIDYIAAVIMIITGVIFAPIGSYISQGLSDKLLMLSFSILMILIGVWSLVK 114

Query: 145 DRLYCERKFPDN--------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKA 195
            +L    +                I G + G L+G  GVGGG      ++F     I +A
Sbjct: 115 VKLMSGSEKSIYKNITPRFIVALLISGGIVGTLTGFFGVGGGFLIVPALVFITAMPIRRA 174

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TS  V  +++    +              +    +N     + +    +   LAT++ 
Sbjct: 175 INTSLLVIFVVSISGFIS------------HYDKTSMNWYIASMFIVGGAIGMFLATRVK 222

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
             +  K L   F++++     V
Sbjct: 223 KSLNDKVLQTIFAIMLVILGVV 244



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 7/122 (5%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I  ++++  + GTL+G FGVGGG ++VP L           ++ +  A+ TSL VI   
Sbjct: 133 FIVALLISGGIVGTLTGFFGVGGGFLIVPALVFI-------TAMPIRRAINTSLLVIFVV 185

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+  F+ H    ++N  I   +I    I   + + +   ++   L   FAI  +++G+++
Sbjct: 186 SISGFISHYDKTSMNWYIASMFIVGGAIGMFLATRVKKSLNDKVLQTIFAIMLVILGVVI 245

Query: 142 LK 143
             
Sbjct: 246 YL 247


>gi|326427306|gb|EGD72876.1| hypothetical protein PTSG_04605 [Salpingoeca sp. ATCC 50818]
          Length = 435

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 50/142 (35%), Gaps = 8/142 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +I V   ++G + G+ GVG G+++VP L +         +I +  A+ +SL       + 
Sbjct: 10  IIAVIGAVAGIMIGMVGVG-GIILVPALIQL-------PNISVQEAIASSLFSYIFAGIA 61

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
               +    TI+       +       +     + H+    +        LL  I    R
Sbjct: 62  GTGSYMYGSTISWTHALWLLLGSVPGAIAAPFALDHISDLAIKLVLYTIILLSAIFSTYR 121

Query: 145 DRLYCERKFPDNYVKYIWGMVT 166
             +  ++   + + +   G   
Sbjct: 122 SVVEWKQTHSEEHRRSSSGTFV 143



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 40/103 (38%), Gaps = 10/103 (9%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +++  G+  GF S   G  G +    +++     I+ +   +  +   IA  +++  +  
Sbjct: 315 LRFAIGVFVGFASALTGSSGPVLLLPILISLRWDIFISLGCAQAIQIPIAVASVIAYVI- 373

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
             G  G+  +++G V       +    + +      L++ +  
Sbjct: 374 --GRPGVIDFAIGGV-------LSATLVPLLCFGAYLAHRLEA 407



 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
            + +  + G V G + G +GVGG I    L+     S+ +A A+S               
Sbjct: 7   THGIIAVIGAVAGIMIGMVGVGGIILVPALIQLPNISVQEAIASSLFSYIFAGIAGTGSY 66

Query: 215 IYS 217
           +Y 
Sbjct: 67  MYG 69


>gi|163751099|ref|ZP_02158329.1| hypothetical protein KT99_09628 [Shewanella benthica KT99]
 gi|161329055|gb|EDQ00127.1| hypothetical protein KT99_09628 [Shewanella benthica KT99]
          Length = 259

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 77/209 (36%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  +   + I L+   + L+G +  + G GGGL+ +P L  A         +    A+ T
Sbjct: 1   MPLELSYELIALLFGVAMLAGFIDAIAG-GGGLITIPALMWA--------GLPPTAALAT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  + +   R G + +  +K  I    +   + ++ +  +D +FL       
Sbjct: 52  NKLQACGGSFFASLYFVRKGMVKLGEMKLAIACAFVGAAIGTIAVQMIDTAFLETLLPFL 111

Query: 134 CLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
            L +G   L   ++  E K   F      +      G   G  G G G  F    +   G
Sbjct: 112 ILGIGGYFLFSKKISEEDKHQVFTPVMFGFTAAFGIGLYDGFFGPGTGSFFALAFVSLAG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             + KATA +  ++      +L+     G
Sbjct: 172 FGLAKATAHAKVLNFSTNIASLIFFAIGG 200


>gi|149911263|ref|ZP_01899885.1| hypothetical protein PE36_02714 [Moritella sp. PE36]
 gi|149805648|gb|EDM65648.1| hypothetical protein PE36_02714 [Moritella sp. PE36]
          Length = 255

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 76/209 (36%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +S     + + L+ + + ++G +  + G GGGL+ +P L            +    A+ T
Sbjct: 5   MSFQLSAEIVGLLFLVAVVAGFIDSIAG-GGGLLTIPALLWV--------GLPPATALAT 55

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  +     R G +++K +K  I    + + + S+ I  +D S L       
Sbjct: 56  NKLQACGGSFFASFYFIRKGMVDVKKMKLAIACTFVGSALGSIAIQSIDPSILEVILPFL 115

Query: 134 CLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
            L +G   L   ++  E K                 G   G  G G G  F    +   G
Sbjct: 116 ILAIGGYFLFSKQISDEDKHQLLTPTLFAITAAFGIGLYDGFFGPGTGSFFAMAFVSLAG 175

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             + KATA +  ++      +L+     G
Sbjct: 176 FGLAKATAHAKVLNFATNIASLIFFALGG 204


>gi|110806292|ref|YP_689812.1| hypothetical protein SFV_2396 [Shigella flexneri 5 str. 8401]
 gi|110615840|gb|ABF04507.1| putative structural protein [Shigella flexneri 5 str. 8401]
          Length = 247

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 13/171 (7%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
            L+G +  + G GGGL+ +P L       G+  +     A+ T+       S+ + +   
Sbjct: 1   MLAGFIDSIAG-GGGLLTIPALM----AAGMSPAN----ALATNKLQACGGSISATIYFI 51

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           R   +++   K  I +  + ++  +L++ +V    L +   I  + +G+  L   +L  E
Sbjct: 52  RRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEE 111

Query: 151 ---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
              R+        I G   GF  G  G   G F  L  ++  G ++ KATA
Sbjct: 112 DRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVMLCGFNLAKATA 162


>gi|87199226|ref|YP_496483.1| hypothetical protein Saro_1204 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87134907|gb|ABD25649.1| protein of unknown function DUF81 [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 262

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 83/240 (34%), Gaps = 25/240 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP++     +         HVA+GTS   +A  ++     H R   +N +    +  
Sbjct: 31  ILAVPLMVYLVGVANP------HVAIGTSALAVAANALSGLASHARARNVNWRCGGMFAA 84

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN----YVKYI 161
              +  +V S +   VD   L   FA+  L++  LM +            N         
Sbjct: 85  AGVVGALVGSTLGKAVDGQRLLALFALLMLVVAFLMWRGRGEQGIEGVTCNRENLPRVVS 144

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWG 220
           +G+ TG LSG  G+GGG      ++      I +A  TS    +       L    SG  
Sbjct: 145 FGLGTGALSGFFGIGGGFLIVPALVASTAMPIGRAIGTSLVAVSAFGLATSLNYAASGL- 203

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY--LTIGFSMIMFTTSFVF 278
                      ++    +  +   +L +   T  S  +  +   L   F+ ++   +   
Sbjct: 204 -----------LDWPLAIAFIVGGVLGSVAGTAASTRLAARKGTLNTVFAGLIVVVALYM 252



 Score = 40.1 bits (93), Expect = 0.38,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 9/118 (7%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
              +G LSG FG+GGG ++VP L           ++ +  A+GTSL  ++   + + + +
Sbjct: 146 GLGTGALSGFFGIGGGFLIVPALVA-------STAMPIGRAIGTSLVAVSAFGLATSLNY 198

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS--FLNKAFAIFCLLMGILMLKRD 145
              G ++  +   +I    + +V  +   + +      LN  FA   +++ + ML R 
Sbjct: 199 AASGLLDWPLAIAFIVGGVLGSVAGTAASTRLAARKGTLNTVFAGLIVVVALYMLARS 256


>gi|186685469|ref|YP_001868665.1| hypothetical protein Npun_R5414 [Nostoc punctiforme PCC 73102]
 gi|186467921|gb|ACC83722.1| protein of unknown function DUF81 [Nostoc punctiforme PCC 73102]
          Length = 265

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 100/276 (36%), Gaps = 41/276 (14%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  L+   SF  G + GL G+GG  ++ P+L   FQ       +   +A+ + +      
Sbjct: 2   HYLLLPFLSFFVGIIVGLTGIGGASLITPMLIFVFQ-------VPPSIAVSSDVVAATLM 54

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            ++  ++H    T++ +++K   F     ++    ++  + ++      +I   L+G+++
Sbjct: 55  KIVGSVKHWEQKTLDTEVVKWLAFGSVPGSLFGVGILHFLKRTGEYNLDSILLRLLGMMI 114

Query: 142 LK----------RDRLYCERKFP-----------DNYVKYIWGMVTGFLSGALGVGGGIF 180
           L                 +   P             ++    G + G L G   V  G  
Sbjct: 115 LLVTALALVQLLLLTFLPKFNLPELPKLDLETNFGRFLTITLGAILGCLVGLTSVSSGSM 174

Query: 181 TNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
             L+++ F+     K   T    +A++     L  +            SLG V+   VL 
Sbjct: 175 FALVLIAFFRLDARKLVGTDISHAAILLLFTALGHL------------SLGTVDWSLVLP 222

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           I   S+    L  K+  +  ++ L      I+   S
Sbjct: 223 IWLGSVPGVLLGAKVCQIAPQRPLRFIIYAILMMVS 258


>gi|313836819|gb|EFS74533.1| integral membrane family protein [Propionibacterium acnes HL037PA2]
 gi|314929772|gb|EFS93603.1| integral membrane family protein [Propionibacterium acnes HL044PA1]
 gi|314972201|gb|EFT16298.1| integral membrane family protein [Propionibacterium acnes HL037PA3]
 gi|328907629|gb|EGG27393.1| putative membrane protein [Propionibacterium sp. P08]
          Length = 255

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 102/257 (39%), Gaps = 22/257 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I+A+F++G ++ + G GGGL+M+P L     L+G+     +   +GT+       ++ +
Sbjct: 9   LILAAFIAGWVNAVVG-GGGLIMLPSL-----LVGLPSETSVATIVGTNKTAQVVGNLTA 62

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + + R    + ++      +  +  VV + +++++ ++       +  +++GI   +R 
Sbjct: 63  GVGYLRKQRPDWRMFLWAAGLAGLGAVVGARIVTYMSRAVYTPILLVVLVIIGIYTWRRP 122

Query: 146 RLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAG 201
            L  +          +  I G+  G   GA+G G G F  L  +   G S  KA+  +  
Sbjct: 123 SLGADHNGEGGKHPVLVPIIGLFLGCYDGAIGPGVGTFWVLTYVAVGGYSFLKASGMAKI 182

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
            + +     +                  G V       ++  ++L      + +   G  
Sbjct: 183 CNTVTNLVTITTLAIH------------GHVWWHVAWPLVIANVLGGLTGARTAMRHGNG 230

Query: 262 YLTIGFSMIMFTTSFVF 278
           ++ + F ++    +   
Sbjct: 231 FVRMMFLIVTSVLAVRM 247


>gi|134301532|ref|YP_001121500.1| hypothetical protein FTW_0461 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134049309|gb|ABO46380.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. tularensis WY96-3418]
          Length = 249

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 100/262 (38%), Gaps = 28/262 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +I+  F+ G   GL G GG ++ V +L+           +  H A+  SL V+  T++ 
Sbjct: 2   FLIIFGFICGIALGLTGGGGSILAVSLLTY-------GVGLDFHSAVTISLLVVGFTAIF 54

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + +   I+   +   I    +   + S +   +    L  +F+I  +L+G   L +
Sbjct: 55  GLIVNYKQHDIHYIAVAVMICTGVVFAPIGSYISQDLSDKLLMLSFSILMILIGAWSLLK 114

Query: 145 DRLYCERK--------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKA 195
            ++    +                I G V G L+G  GVGGG      ++F     I +A
Sbjct: 115 AKIMSSSQKSVCKSIGSRCIVALLISGAVVGTLTGFFGVGGGFLIVPALVFITAMPIKRA 174

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TS  V  +++    +              +    ++     + +  S +   LATK+ 
Sbjct: 175 INTSLLVIFVVSISGFIS------------HYDKANMSWYIASMFIVGSAIGMLLATKVK 222

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
             +  K L   F++++     V
Sbjct: 223 KSLNDKVLQTIFAIMLVILGVV 244



 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 7/121 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++++  + GTL+G FGVGGG ++VP L           ++ +  A+ TSL VI   S
Sbjct: 134 IVALLISGAVVGTLTGFFGVGGGFLIVPALVFI-------TAMPIKRAINTSLLVIFVVS 186

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +  F+ H     ++  I   +I    I  ++ + +   ++   L   FAI  +++G+++ 
Sbjct: 187 ISGFISHYDKANMSWYIASMFIVGSAIGMLLATKVKKSLNDKVLQTIFAIMLVILGVVIY 246

Query: 143 K 143
            
Sbjct: 247 L 247


>gi|242279837|ref|YP_002991966.1| hypothetical protein Desal_2371 [Desulfovibrio salexigens DSM 2638]
 gi|242122731|gb|ACS80427.1| protein of unknown function DUF81 [Desulfovibrio salexigens DSM
           2638]
          Length = 386

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 47/116 (40%), Gaps = 9/116 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +V  F+   L+   GVGGG ++VP L+           + M++  GTS   +      S 
Sbjct: 263 VVGGFIIAALASFLGVGGGFLLVPFLTSV-------AGLPMYLVAGTSALAVLVGMTTSV 315

Query: 87  MEHR--RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +   +   +   ++   +  + + + +      ++   +L + F +  L +GI 
Sbjct: 316 FTYMVVKDTPVFWPLIGVELLGILVGSFIGPRTSKYIPDVWLKRLFVVLALYVGIR 371



 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 44/126 (34%), Gaps = 11/126 (8%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLV 213
           +  +  + G +   L+  LGVGGG      +    G  +Y    TSA    +    ++  
Sbjct: 258 NPLIPVVGGFIIAALASFLGVGGGFLLVPFLTSVAGLPMYLVAGTSALAVLVGMTTSVFT 317

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            +     +   P      V    + + L   ++ + +  + S  I   +L   F ++   
Sbjct: 318 YMV----VKDTP------VFWPLIGVELLGILVGSFIGPRTSKYIPDVWLKRLFVVLALY 367

Query: 274 TSFVFA 279
               ++
Sbjct: 368 VGIRYS 373


>gi|237798513|ref|ZP_04586974.1| hypothetical protein POR16_06721 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331021365|gb|EGI01422.1| hypothetical protein POR16_06721 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 261

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 99/273 (36%), Gaps = 39/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +VA  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   FVVAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + HR++  I+ K+            ++T   +S +        + + +A     LL  +
Sbjct: 60  VLVHRKNDNIDWKVTGLLTMGSVPAVLLTLWFLSTLHAAPEALNAIIKQALGYVLLLTAL 119

Query: 140 LMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + +L                     +  I G++ G +     +G G      L +L
Sbjct: 120 AVLFKKKLLAFAHGRGDGHSFFSGTSLTVLTVITGLILGTMVALTSIGAGALGTVALFIL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +              + GL   S+G +N   +  +L  S+ 
Sbjct: 180 YPLLPTRRLVGTEIAHAVPLTL------------VAGLGHASMGNMNWALLGWLLMGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L + ++  I    L    ++++    F  A
Sbjct: 228 GIYLGSHMAGRISDDILRPFLAIMLGMIGFKLA 260



 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 148 VLTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G +N  +L   +        + S M   +    L    AI   ++G  +  
Sbjct: 202 VAGLGHASMGNMNWALLGWLLMGSLPGIYLGSHMAGRISDDILRPFLAIMLGMIGFKLAF 261



 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                 + G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 4   GGLGFVVAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 61


>gi|301383215|ref|ZP_07231633.1| hypothetical protein PsyrptM_11287 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302133724|ref|ZP_07259714.1| hypothetical protein PsyrptN_20139 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|330965245|gb|EGH65505.1| hypothetical protein PSYAC_11466 [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331018437|gb|EGH98493.1| hypothetical protein PLA106_20568 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 252

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 97/270 (35%), Gaps = 39/270 (14%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T     + 
Sbjct: 2   AGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGGVLV 53

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGILML 142
           HR++  I+ K+            ++T   +S +        + + +A     LL  + +L
Sbjct: 54  HRKNDNIDWKVTGLLTLGSVPAVLLTLWFLSTLHTAPDALNAIIKQALGYVLLLTALAVL 113

Query: 143 KRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLMLFYG 189
            + +L                     +  I G++ G +     +G G      L +L+  
Sbjct: 114 FKKKLLAFAHGRGDGQSFFSGTSLTVLTVITGLILGTMVALTSIGAGALGTVALFILYPL 173

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
               +   T    +  +              + GL   S+G +N   +  +L  S+    
Sbjct: 174 LPTRRLVGTEIAHAVPLTL------------VAGLGHASMGNMNWELLGWLLMGSLPGIY 221

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           L + ++  +    L    ++++    F  A
Sbjct: 222 LGSHMAGRVSDDLLRPFLAIMLGMIGFKLA 251



 Score = 42.0 bits (98), Expect = 0.093,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 45/120 (37%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 139 VLTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAVPLTL 192

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G +N ++L   +        + S M   V    L    AI   ++G  +  
Sbjct: 193 VAGLGHASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDDLLRPFLAIMLGMIGFKLAF 252


>gi|303325610|ref|ZP_07356053.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
 gi|302863526|gb|EFL86457.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
          Length = 421

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 99/294 (33%), Gaps = 71/294 (24%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I     +G ++G  G GGG ++ P L            +   +A+GT L  I   ++M  
Sbjct: 81  IAVGLAAGLITGCIGAGGGFIITPALMAV--------GVKGILAVGTDLFHIFAKAIMGT 132

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMIS-------HVDKSFLNKAFAIFCLLMGI 139
             H++ G ++ K+   ++    + T +   +          + + F++  +A+    +G 
Sbjct: 133 TVHKKLGNVSAKLAIAFLVGSIVGTFIGGAINKGLYNADPLLSELFISTIYAVLLGFLGF 192

Query: 140 LML------------------------------------------KRDRLYCERKFPDNY 157
             L                                            + L    +    +
Sbjct: 193 YALFDFLKATRGGSKAASQSAHGGSAGLTSLSVRMQSLTVPPMISFDEDLVPGGRRISGW 252

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIY 216
           +    GMV G L+  +GVGGG  T  + ++ +G S      T        A  A +    
Sbjct: 253 IVAAGGMVVGLLAAIMGVGGGFVTFPMFVYIFGVSSMTTVGTDILQIIFTAGFAAVG--- 309

Query: 217 SGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
                     +++ G+V     + +L  S+L   +    + ++   ++   +++
Sbjct: 310 ---------QYAIYGYVFYTLAIGMLLGSLLGIQVGALTTKVVKGIHIRGFYAI 354



 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 42/118 (35%), Gaps = 8/118 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++     + G L+ + GVGGG V  P+    F        +     +GT +  I  T+ 
Sbjct: 252 WIVAAGGMVVGLLAAIMGVGGGFVTFPMFVYIF-------GVSSMTTVGTDILQIIFTAG 304

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            + +     +G +   +    +    +   V +L    V    +   +AI  +   I 
Sbjct: 305 FAAVGQYAIYGYVFYTLAIGMLLGSLLGIQVGALTTKVVKGIHIRGFYAISIIAGFIN 362


>gi|262202177|ref|YP_003273385.1| hypothetical protein Gbro_2244 [Gordonia bronchialis DSM 43247]
 gi|262085524|gb|ACY21492.1| protein of unknown function DUF81 [Gordonia bronchialis DSM 43247]
          Length = 317

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 91/261 (34%), Gaps = 23/261 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I LI +  F +  + G  G+  G+      +     +G + +     A  T       T+
Sbjct: 4   IVLIALVGFAAQLVDGSLGMAYGVTT----TTLLLAIGTNPAA----ASATVHLAEIGTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++S + H + G ++ ++++       +   + + ++S +         A+  LL+G+ +L
Sbjct: 56  LVSGVSHWKFGNVDWRVVRRIAIPGAVGAFLGATILSQLSTEAAAPVMAVILLLLGLYIL 115

Query: 143 KRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKAT 196
            R            K          G V GF+    G G G      +L  G     K  
Sbjct: 116 LRFTFQGIPRHHLGKPLRKRFLGPLGFVAGFVDATGGGGWGPVGTPAILASGRLEPRKVI 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            +      +IA  A L  ++S              +N   V  IL   ++  P+A  L  
Sbjct: 176 GSIDTSEFIIAVAASLGFLFSLGSQG---------INFAWVGAILVGGVVAAPIAAWLVR 226

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            I  + L      ++  T+  
Sbjct: 227 HIPPRLLGASVGGLIVLTNAR 247


>gi|329754328|gb|AEC03562.1| magnetosome protein MamO [alpha proteobacterium CB-1]
          Length = 591

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 68/218 (31%), Gaps = 48/218 (22%)

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + +   +    +K  I       ++   + + +  S +     +F L+M    + 
Sbjct: 382 AASLRNDKAQLVQWDKVKPLIPWGIAGVILGYFIGNAIGDSVVGILLGLFALIMAGKAVM 441

Query: 144 -----------------------------------RDRLYCERKFPDNYVKYIWGMVTGF 168
                                              R +         +    + G+  G 
Sbjct: 442 EILQPNAGEETAESISAAEAEDEMDELMALADGTSRPKASGLALPEGHARSAVLGLPMGL 501

Query: 169 LSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            SG LG+ GG+    L  + G  S+  A A S+ +    +    +V    G         
Sbjct: 502 FSGILGISGGVIEVPLQRYVGRISLQNAIANSSVLVFWASVAGSVVAFLHGS-------- 553

Query: 228 SLGFVNIGA----VLIILPISILITPLATKLSYMIGKK 261
           S G ++  A     L+++P + +   +  +L  ++  +
Sbjct: 554 STGLIHWEAPVTLALVMIPGAYVGGIIGARLMRVLPVR 591



 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 11/99 (11%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V     G  SG+ G+ GG++ VP+             I +  A+  S  ++   SV   
Sbjct: 493 AVLGLPMGLFSGILGISGGVIEVPLQRYV-------GRISLQNAIANSSVLVFWASVAGS 545

Query: 87  MEHRRHGT----INMKILKDWIFVLPITTVVTSLMISHV 121
           +    HG+    I+ +       V+     V  ++ + +
Sbjct: 546 VVAFLHGSSTGLIHWEAPVTLALVMIPGAYVGGIIGARL 584


>gi|330810670|ref|YP_004355132.1| membrane protein [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327378778|gb|AEA70128.1| Conserved hypothetical protein, putative membrane protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 254

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 73/202 (36%), Gaps = 13/202 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L+ V +F +G +    G GGGL+ +P L           S      +GT+    A  +
Sbjct: 4   IVLLCVFAFAAGLIDAAVG-GGGLIQIPALFNVL------PSAQPAALLGTNKVAAACGT 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +     R   I+  ++        +     +  +S V ++ +  A  +  +LM I   
Sbjct: 57  AFAARSFLRKVVIDWSLVVPAAGAAFVMAFAGAATVSIVPQALMRPAVLVLIILMAIYTF 116

Query: 143 KRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKAT 196
            +       K       +  +  + G   GF  G  G G G F   L +         A+
Sbjct: 117 WKKDFGSLHKPMRIGTKEKLLAVLIGGAIGFYDGLFGPGTGSFLIFLFIRCFAFDFLHAS 176

Query: 197 ATSAGVSALIAFPALLVRIYSG 218
           A++  V+      ALL  I SG
Sbjct: 177 ASAKLVNIATNVAALLFFIPSG 198


>gi|167624629|ref|YP_001674923.1| hypothetical protein Shal_2711 [Shewanella halifaxensis HAW-EB4]
 gi|167354651|gb|ABZ77264.1| protein of unknown function DUF81 [Shewanella halifaxensis HAW-EB4]
          Length = 259

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 79/209 (37%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           ++ D   + I L+   + L+G +  + G GGGL+ +P L  A         +   VA+ T
Sbjct: 1   MTLDLTFELIALLFFIAMLAGFIDAIAG-GGGLLTIPALMWA--------GLPPTVALAT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  +     R G + +  +K  I    +   + ++ +  +D +FL       
Sbjct: 52  NKLQACGGSFFASFYFVRKGMVKLGDMKLSIACAFVGASLGTIAVQMIDTAFLEVFLPFL 111

Query: 134 CLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
            L +G   L   ++  + K          +   +  GF  G  G G G  F    +   G
Sbjct: 112 MLAIGGYFLFSKKISEDDKLQVLTPGVFAFTAALGVGFYDGFFGPGTGSFFALAFVSLAG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             + KATA +  ++      +L+     G
Sbjct: 172 YGLAKATAHAKILNFSTNIASLIFFAIGG 200


>gi|75911222|ref|YP_325518.1| hypothetical protein Ava_5026 [Anabaena variabilis ATCC 29413]
 gi|75704947|gb|ABA24623.1| Protein of unknown function DUF81 [Anabaena variabilis ATCC 29413]
          Length = 263

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 93/267 (34%), Gaps = 41/267 (15%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
            G + GL G+GG  ++ P+L  AFQ       +   VA+ + +       V+  ++H + 
Sbjct: 13  VGIVVGLTGIGGASLITPMLIFAFQ-------VPPAVAVSSDVVAATLMKVIGSVKHWQQ 65

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKS----------FLNKAFAIFCLLMGILML 142
            T++ +++K         +++   ++  +              L     +   ++ ++ +
Sbjct: 66  QTVDREVVKWLALGSVPGSLLGVGILHLIKLKAEHSLNDIMLHLLGVTILSVTILALMQM 125

Query: 143 KRDRLYCERKFP-----------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGA 190
                + + + P                 I G   G + G   V  G    L+++ F+  
Sbjct: 126 LLLTFFPQLQLPELPKFDLTTQLGRLQTVIVGAFLGCVVGLTSVASGSLFALVLIAFFRL 185

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
              K   T    +A++     +  +            +LG V+   VL I   S+    +
Sbjct: 186 DARKLVGTDISQAAILLIFTAVGHL------------TLGTVDWNLVLPIWLGSVPGVLI 233

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             K+  +  +K L      I+   S  
Sbjct: 234 GAKVCQIAPQKPLRFMVYFILMLVSLK 260


>gi|239787318|emb|CAX83795.1| Trypsin-like serine protease [uncultured bacterium]
          Length = 679

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 85/282 (30%), Gaps = 50/282 (17%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
            SG+  +GGG++ V  +   F   G    +   VA  T+          +  ++   G +
Sbjct: 405 ASGVMSMGGGVIHVAGMMAIF---GYGMFLIRPVAYLTN----IFIFGAAAHKNASSGLV 457

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL------------MLK 143
               ++  I    I  V    +   +    +     +F  +M  +            ML 
Sbjct: 458 TWNSVQTVIPWAIIGVVSGYFVGIAMGDKGIAIMLGLFAAVMTAIGLHEILTHGSGEMLL 517

Query: 144 RDRLYCE--------------------------RKFPDNYVKYIWGMVTGFLSGALGVGG 177
           +                                          + G+  G +SG +G+ G
Sbjct: 518 KKGGAANVDASAMDDSLLDGIIEAHGPRLSLFPPSMEHQARNALLGLPVGMISGIMGISG 577

Query: 178 GIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G+    L  F  G S+  A A S  V    +    LV    G     +   +     +  
Sbjct: 578 GVVGVPLERFLGGKSLQTAIANSTVVVFWHSVAGALVAFIHGVSSGQIEWQT----PLVL 633

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             I+LP + L   +  KL  ++    L   ++  M   +F  
Sbjct: 634 AGIMLPGAFLGGLVGAKLMKVLPIIALKWFYTATMALIAFNM 675



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 15/125 (12%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +     G +SG+ G+ GG+V VP+               +  A+  S  V+   SV   
Sbjct: 560 ALLGLPVGMISGIMGISGGVVGVPLERFL-------GGKSLQTAIANSTVVVFWHSVAGA 612

Query: 87  MEHRRHG----TINMK----ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           +    HG     I  +    +    +    +  +V + ++  +    L   +     L+ 
Sbjct: 613 LVAFIHGVSSGQIEWQTPLVLAGIMLPGAFLGGLVGAKLMKVLPIIALKWFYTATMALIA 672

Query: 139 ILMLK 143
             ML 
Sbjct: 673 FNMLF 677


>gi|212702514|ref|ZP_03310642.1| hypothetical protein DESPIG_00532 [Desulfovibrio piger ATCC 29098]
 gi|212673955|gb|EEB34438.1| hypothetical protein DESPIG_00532 [Desulfovibrio piger ATCC 29098]
          Length = 377

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 52/122 (42%), Gaps = 8/122 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V   +  +++   GVGGG ++VP L+   QL        M++A GTS   +  + +
Sbjct: 254 ILPFVGGIVISSIAAFLGVGGGFLLVPFLTSITQL-------PMYLAAGTSALAVLVSMI 306

Query: 84  MSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                   HG T++  ++   +  + + +++           +L + F +  L +G   +
Sbjct: 307 TGITTLLLHGVTVDWSLVGLELVGIAVGSLIGPYTSRFFSDIWLKRLFIVLALYVGTDYV 366

Query: 143 KR 144
            R
Sbjct: 367 LR 368



 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 76/257 (29%), Gaps = 68/257 (26%)

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL----- 126
            ++  +   ++ +S   + R      +I+      L + ++V + M   +    L     
Sbjct: 121 ASNQMLAGLSAALSTFSYYRLK----RIVLPLGIALGLGSIVGAFMAVKLTAGKLNFSSY 176

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFP-------------------------------- 154
              F +F LL+G  ++       +R                                   
Sbjct: 177 QGYFGLFVLLLGCYLMWETSPAGQRSKAKAKEAAKAFEASIKNKNSGEAVETGVRLRSFS 236

Query: 155 ---------------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
                          +  + ++ G+V   ++  LGVGGG      +       +Y A  T
Sbjct: 237 LGRCVFTFCGVEFSFNPILPFVGGIVISSIAAFLGVGGGFLLVPFLTSITQLPMYLAAGT 296

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           SA    +     +   +  G  +     WSL  V +  ++ I   S+    +    S   
Sbjct: 297 SALAVLVSMITGITTLLLHGVTV----DWSL--VGLE-LVGIAVGSL----IGPYTSRFF 345

Query: 259 GKKYLTIGFSMIMFTTS 275
              +L   F ++     
Sbjct: 346 SDIWLKRLFIVLALYVG 362


>gi|224367468|ref|YP_002601631.1| hypothetical protein HRM2_03470 [Desulfobacterium autotrophicum
           HRM2]
 gi|223690184|gb|ACN13467.1| hypothetical protein HRM2_03470 [Desulfobacterium autotrophicum
           HRM2]
          Length = 362

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 51/119 (42%), Gaps = 8/119 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +V   +   ++   GVGGG ++VP L+           + M++A GTS   +  + + S 
Sbjct: 242 LVGGVVISAIAAFLGVGGGFLLVPFLTSV-------AELPMYLAAGTSALAVLISMITSI 294

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +     G   +  ++   +  + + +++      +    +L + F +  L +G+  + R
Sbjct: 295 VTLISKGVQFDWALIGLELAGVAVGSIIGPRTSKYFSDLWLKRLFIVLALYVGVDYVLR 353



 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 20/126 (15%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLV 213
           +  +  + G+V   ++  LGVGGG      +       +Y A  TSA    +    +++ 
Sbjct: 237 NPLIPLVGGVVISAIAAFLGVGGGFLLVPFLTSVAELPMYLAAGTSALAVLISMITSIVT 296

Query: 214 RIYSG----WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            I  G    W L GL            +  +   SI    +  + S      +L   F +
Sbjct: 297 LISKGVQFDWALIGLE-----------LAGVAVGSI----IGPRTSKYFSDLWLKRLFIV 341

Query: 270 IMFTTS 275
           +     
Sbjct: 342 LALYVG 347


>gi|42523625|ref|NP_969005.1| putative permease [Bdellovibrio bacteriovorus HD100]
 gi|39575831|emb|CAE79998.1| putative permease [Bdellovibrio bacteriovorus HD100]
          Length = 271

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 85/259 (32%), Gaps = 45/259 (17%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VPVL+  +        + +  A+  SL  I  TS  +   + +    N+++      
Sbjct: 26  IIVVPVLTLVYH-------VDIRYAIAASLISIVATSSGAAASYLKDSLTNLRLAVFLEV 78

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY----------------- 148
                 +V  L+ S +   FL   F  F L   ++ML++   +                 
Sbjct: 79  GTVSGAIVGFLISSFIKAQFLFLLFGTFLLFSALMMLRKRGEHIATVNHPWAEKLKLDGV 138

Query: 149 --------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATS 199
                    E K  +  +        G +S  LG+G GIF  L M       I  ++ATS
Sbjct: 139 YPEGGNRLVEYKVQNVPLGLFAMFGAGVMSALLGIGSGIFKVLAMDGAMKLPIKVSSATS 198

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +  + A  +    +  G     +             + I+  S     +  K    I 
Sbjct: 199 NFMIGVTASASAGAYLLRGDVRPEIAA--------PVAVGIIVGSF----VGAKAMVKIP 246

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              +   F +++   S   
Sbjct: 247 AVRIRQIFVVVLSIVSIQM 265



 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 52/128 (40%), Gaps = 7/128 (5%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  V  + L + A F +G +S L G+G G+  V         M     + + V+  TS  
Sbjct: 148 EYKVQNVPLGLFAMFGAGVMSALLGIGSGIFKV-------LAMDGAMKLPIKVSSATSNF 200

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           +I  T+  S   +   G +  +I       + + + V +  +  +    + + F +   +
Sbjct: 201 MIGVTASASAGAYLLRGDVRPEIAAPVAVGIIVGSFVGAKAMVKIPAVRIRQIFVVVLSI 260

Query: 137 MGILMLKR 144
           + I M+ +
Sbjct: 261 VSIQMIIK 268


>gi|316934716|ref|YP_004109698.1| hypothetical protein Rpdx1_3395 [Rhodopseudomonas palustris DX-1]
 gi|315602430|gb|ADU44965.1| protein of unknown function DUF81 [Rhodopseudomonas palustris DX-1]
          Length = 268

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 81/248 (32%), Gaps = 36/248 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L   F        I  HVA+ T L   A T ++    H R+G I+ +I K     
Sbjct: 36  LMTPLLLLVF-------GIAPHVAIATDLWFAAITKLIGASVHHRNGLIDWRIAKRLWAG 88

Query: 107 LPITTVVTSLMISHVD----KSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN------ 156
                 +   +++  D      +L K  A   +L    ++   RL      P        
Sbjct: 89  SLPAAALVVAIVALADPIGRTQWLTKIIAAVVILTAFGIVFAPRLIASLVPPSRDDQPAE 148

Query: 157 ----YVKYIWGMVTGFLSGALGVGGGIFTNL---LMLFYGASIYKATATSAGVSALIAFP 209
                   + G V G L     +G G    +    +       ++  AT    +  +A  
Sbjct: 149 PDRAAPTVLAGAVLGGLVALTSIGAGALGTVLLLYLYPRRLLPHRLVATDLAHAIPLAMV 208

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           A    + +G             V+   ++ +L  SI    +    +  +  + L I  + 
Sbjct: 209 AGAGYLVAGM------------VDWHILISLLTGSIPAVIVGGLSAGRLSGRRLQIALAA 256

Query: 270 IMFTTSFV 277
           ++F     
Sbjct: 257 VLFAVGLK 264



 Score = 37.4 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 5/117 (4%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A  + G L  L  +G G      L     L      +  H  + T L    P ++++ 
Sbjct: 156 VLAGAVLGGLVALTSIGAG-----ALGTVLLLYLYPRRLLPHRLVATDLAHAIPLAMVAG 210

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
             +   G ++  IL   +       +V  L    +    L  A A     +G+  L 
Sbjct: 211 AGYLVAGMVDWHILISLLTGSIPAVIVGGLSAGRLSGRRLQIALAAVLFAVGLKGLL 267


>gi|228908231|ref|ZP_04072077.1| hypothetical protein bthur0013_23920 [Bacillus thuringiensis IBL
           200]
 gi|228851429|gb|EEM96237.1| hypothetical protein bthur0013_23920 [Bacillus thuringiensis IBL
           200]
          Length = 252

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 106/265 (40%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  ++ + L+ + + L+G +  + G GGG++ +P++            +   VA+ T+  
Sbjct: 2   DFTIELLILLFLVAVLAGWIDTIAG-GGGMITIPIMLLV--------GMSPSVAIATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  ++M+ M   +   IN+K ++  I +  + +V    ++  +   +L        ++
Sbjct: 53  QGSSGTLMATMIFIKKKEINLKDMRLSILMTFLGSVFGGWLVLQIRAEYLIMILPFLLII 112

Query: 137 MGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           +G+  L    +  E   RK              GF  G  G G G    L  +L  G S 
Sbjct: 113 IGLYFLLSPNIANEDRPRKISMLLFALTVAPFLGFYDGFFGPGTGSLIALAFILLCGYSA 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++    F ALL  I  G        W++G       LI++   I+ + +  
Sbjct: 173 TRATANAKILNFTSNFAALLYFIIFGQ-----IDWAIG-------LIMMLGQIIGSYIGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           K+    G   +     ++ F  +  
Sbjct: 221 KMVLTKGTSLIRPIVVIVCFVMAIK 245


>gi|145591467|ref|YP_001153469.1| hypothetical protein Pars_1253 [Pyrobaculum arsenaticum DSM 13514]
 gi|145283235|gb|ABP50817.1| protein of unknown function DUF81 [Pyrobaculum arsenaticum DSM
           13514]
          Length = 307

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 82/258 (31%), Gaps = 45/258 (17%)

Query: 54  KAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV 113
               +  +   I    A G SL     TS  S   + R G +N++I           +++
Sbjct: 53  FLVPIYTLYMGIPFPYAAGASLISTIATSSGSASVYIRKGIVNVRIGVGLAVATTTGSII 112

Query: 114 TSLMISHV----DKSFLNKAFAIFCLLMGILMLKRDRLY--------------------- 148
            S++++ +     +  L   F    L    +   R +                       
Sbjct: 113 GSILVARIYAAGLEHVLYLIFGSVLLAQIYVQWSRSKSELPPPRDPDWTTRVFQLWGRYY 172

Query: 149 ---CERKFPDNYVKYIWGMVT----GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSA 200
                R+   + V++  G +     G +SG LG+G G+   L M +     +  +T TS 
Sbjct: 173 DEALGREVEYHGVRWWLGALIMLAAGVISGLLGIGAGVLKVLAMDWAMNLPMKVSTTTSN 232

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            +  + A     V    G+    L   +         + +L  S     + TK+   I  
Sbjct: 233 YMIGITAATGSAVYWAHGYIQPFLAAGT--------AIGVLAGSY----VGTKILMKITG 280

Query: 261 KYLTIGFSMIMFTTSFVF 278
           + +   F  I+       
Sbjct: 281 RKIRYIFIAILAYLGVRM 298



 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 48/121 (39%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +    +G +SGL G+G G++ V  +  A        ++ M V+  TS  +I  T+ 
Sbjct: 188 WLGALIMLAAGVISGLLGIGAGVLKVLAMDWAM-------NLPMKVSTTTSNYMIGITAA 240

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +  HG I   +       +   + V + ++  +    +   F      +G+ M+ 
Sbjct: 241 TGSAVYWAHGYIQPFLAAGTAIGVLAGSYVGTKILMKITGRKIRYIFIAILAYLGVRMVL 300

Query: 144 R 144
           R
Sbjct: 301 R 301


>gi|332139492|ref|YP_004425230.1| hypothetical protein MADE_1000415 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327549514|gb|AEA96232.1| hypothetical protein MADE_1000415 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 266

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/275 (19%), Positives = 108/275 (39%), Gaps = 39/275 (14%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L  +A+ L G + G+ G GG ++ VP+L      MG+       +A G SL ++  T
Sbjct: 1   MIILGYIAAVLMGMVLGVIGGGGSILTVPILVYL---MGVTPD----IATGYSLLIVGAT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVT-SLMISHVDKSF------------LNK 128
           +    + + + G +++K    +     I   ++ + ++  + ++             +  
Sbjct: 54  AAFGAVRYFKEGLVDVKASILFAVPSIIAVYLSRAYLMPAIPETISFQSLTIDKNLGIMV 113

Query: 129 AFAIFCLLMGILMLKRDRLYC-------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
            FA   L    +MLK+            E+K P+  +  I G V G ++G LG GGG   
Sbjct: 114 LFAALMLASAAMMLKKAYSKSTPATQVIEKKQPNIGLIVIEGAVVGVVTGILGAGGGFLI 173

Query: 182 NLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
              ++   G  +  A   S  + AL +    +  + +G  L               + ++
Sbjct: 174 IPALVLILGMPMKNAVGASLFIIALKSLLGFVGDLQTGIQLEMP-----------LLPLM 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           L  + +   ++TK++  +    L   F+      +
Sbjct: 223 LVATFIGMAVSTKVAGKLDGAALQKFFAFFTLVIA 257



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 63/124 (50%), Gaps = 8/124 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I LI++   + G ++G+ G GGG +++P L            + M  A+G SL +IA  S
Sbjct: 148 IGLIVIEGAVVGVVTGILGAGGGFLIIPALVLIL-------GMPMKNAVGASLFIIALKS 200

Query: 83  VMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ F+   + G  + M +L   +    I   V++ +   +D + L K FA F L++ + +
Sbjct: 201 LLGFVGDLQTGIQLEMPLLPLMLVATFIGMAVSTKVAGKLDGAALQKFFAFFTLVIAVFI 260

Query: 142 LKRD 145
           + ++
Sbjct: 261 MTKE 264


>gi|320324592|gb|EFW80669.1| hypothetical protein PsgB076_11725 [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320328964|gb|EFW84963.1| hypothetical protein PsgRace4_16814 [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 280

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 95/264 (35%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 30  LTTLAILAVVAFIAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 80

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     +    +     +++  ++   +LN+   +     G+
Sbjct: 81  FGSATASFTFYRRKLFHPRQWIHAVVGTAVGAAAGAVIAHYLPAEWLNQMLPVIVFGCGL 140

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G+  GF  G  G G G F T   +L Y   + KA
Sbjct: 141 YLLFGGTPKAPLDSNAPIKKKWQLPQGLGLGFYDGVAGPGTGAFWTVSTLLLYPVDLVKA 200

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V I+SG        + +G       L +    +L        +
Sbjct: 201 SGVARSMNFVSNAVALSVFIFSGQ-----VDYIIG-------LSMGLAVMLGAYFGAGTA 248

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 249 IKGGAKFIRPVFITVVLGLTVRLA 272


>gi|86747584|ref|YP_484080.1| hypothetical protein RPB_0458 [Rhodopseudomonas palustris HaA2]
 gi|86570612|gb|ABD05169.1| Protein of unknown function DUF81 [Rhodopseudomonas palustris HaA2]
          Length = 267

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 71/205 (34%), Gaps = 15/205 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            + + +  L G +  L G GG ++ VP+L     +         HVA+GTS   +A +++
Sbjct: 10  LITVASGGLVGFILALIGGGGSVLAVPLLVYVVGVR------SPHVAIGTSAIAVAISAL 63

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + H   G +       +           S +   +D   L   F +  +++G+LM +
Sbjct: 64  ANMLSHWAAGHVRWACALVFSAAGIGGAFAGSSVAKQIDGQQLLVLFGVLMIVIGVLMSR 123

Query: 144 RDRLYCERKFPDN--------YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYK 194
                 +                    G   G L+G  G+GGG      L+L  G  +  
Sbjct: 124 GRAGGGDPTIRLTMATAKAMLPKLIGTGFGVGVLAGFFGIGGGFLIVPGLILATGMPLTY 183

Query: 195 ATATSAGVSALIAFPALLVRIYSGW 219
           A  +S                 SG 
Sbjct: 184 AIGSSLVAVFAFGASTAASYALSGL 208



 Score = 35.4 bits (81), Expect = 9.9,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 14/125 (11%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG--ASIYKATATSAGVSALIAFPALLVR 214
            +    G + GF+   +G GG +    L+++     S + A  TSA   A+ A   +L  
Sbjct: 10  LITVASGGLVGFILALIGGGGSVLAVPLLVYVVGVRSPHVAIGTSAIAVAISALANMLS- 68

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                       W+ G V     L+     I      + ++  I  + L + F ++M   
Sbjct: 69  -----------HWAAGHVRWACALVFSAAGIGGAFAGSSVAKQIDGQQLLVLFGVLMIVI 117

Query: 275 SFVFA 279
             + +
Sbjct: 118 GVLMS 122


>gi|199598453|ref|ZP_03211871.1| Predicted permease [Lactobacillus rhamnosus HN001]
 gi|258508929|ref|YP_003171680.1| permease [Lactobacillus rhamnosus GG]
 gi|199590637|gb|EDY98725.1| Predicted permease [Lactobacillus rhamnosus HN001]
 gi|257148856|emb|CAR87829.1| Conserved permease [Lactobacillus rhamnosus GG]
 gi|259650222|dbj|BAI42384.1| putative transporter protein [Lactobacillus rhamnosus GG]
          Length = 245

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 61/151 (40%), Gaps = 1/151 (0%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
            A  TSL    P   +    H R G +        +      TVV SL   ++ +   + 
Sbjct: 41  TAAATSLFTAIPALAVGCYSHYRTGNMRFHAGNRILLTAVPATVVGSLAAPYIPELVYSW 100

Query: 129 AFAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
           A AI  +++G+ ML++      ++     +  Y+ GM++G + G  G+ GG      ++ 
Sbjct: 101 AIAIIFMVLGVQMLRQSFGRKAKKTTQPAWFAYVLGMISGLMVGVAGLSGGGPIMAGLML 160

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSG 218
            G  +  A ATS+     ++     +    G
Sbjct: 161 MGLDMPHAAATSSYALVALSIIGCFLHATQG 191


>gi|197285658|ref|YP_002151530.1| hypothetical protein PMI1801 [Proteus mirabilis HI4320]
 gi|227356163|ref|ZP_03840552.1| membrane protein [Proteus mirabilis ATCC 29906]
 gi|194683145|emb|CAR43744.1| putative membrane protein [Proteus mirabilis HI4320]
 gi|227163627|gb|EEI48543.1| membrane protein [Proteus mirabilis ATCC 29906]
          Length = 266

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 101/260 (38%), Gaps = 25/260 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              L+   + L+G +  + G GGGL+ +P L            I    A+ T+       
Sbjct: 9   IYLLLFFVAVLAGFIDSIAG-GGGLITIPALL--------SAGISPVQALATNKLQSVGG 59

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + +   R   I++K  +  IF+  I  V  ++++  ++   L +A  +  + +G+  
Sbjct: 60  SFSATLYFIRRRVIDLKAQRFAIFMTFIGAVSGAMLVQFINPELLKQALPVLTIAIGLYF 119

Query: 142 LKRDRLYCERKFPDNY---VKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L    +  +             I G   GF  G  G G G F  L  ++  G ++ KATA
Sbjct: 120 LLTPSIGAKDSKQRLGYYTFGVIIGGGIGFYDGVFGPGTGSFFALGYVMLLGYNLSKATA 179

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  ++    F +LL  I  G  +     W++G       L++L    +   L   L   
Sbjct: 180 HAKLLNFTSNFGSLLFFILGGQVI-----WTIG-------LVMLCGQFIGARLGAGLVLT 227

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
            G+K +     +I F  S  
Sbjct: 228 KGQKLIRPMLVIISFLMSIK 247


>gi|323141428|ref|ZP_08076318.1| hypothetical protein HMPREF9443_01091 [Phascolarctobacterium sp.
           YIT 12067]
 gi|322414084|gb|EFY04913.1| hypothetical protein HMPREF9443_01091 [Phascolarctobacterium sp.
           YIT 12067]
          Length = 254

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 71/201 (35%), Gaps = 15/201 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +IV+ F++  +    G GGGL+  P L            + +  A+GT+    +   
Sbjct: 9   VIFLIVSGFIASFIDSTVG-GGGLISTPALLSL--------GLPVPYALGTNKLAASIGC 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S +   R G I        + +  I + + + ++  + +  +     +  + + +   
Sbjct: 60  FTSVLSFWRAGKIKKAAF-TLMPLSFIGSALGAYVVYLLPEQLMKNIIVVLLVAVAVYTY 118

Query: 143 KRDRLYCERKFPDNYVKYIWGMVT-----GFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           +R             ++ + G +      GF  G  G G G F     L+ G     A  
Sbjct: 119 RRKDWGDAGTVEKLGMQALIGAIVMAFAMGFYDGFFGPGTGSFLIFGFLYLGYDFVTAAG 178

Query: 198 TSAGVSALIAFPALLVRIYSG 218
            +  ++      AL+    SG
Sbjct: 179 NAKALNFASGVGALVSFAVSG 199


>gi|168483330|ref|ZP_02708282.1| putative domain of unknown function [Streptococcus pneumoniae
           CDC1873-00]
 gi|168494287|ref|ZP_02718430.1| putative domain of unknown function [Streptococcus pneumoniae
           CDC3059-06]
 gi|172043187|gb|EDT51233.1| putative domain of unknown function [Streptococcus pneumoniae
           CDC1873-00]
 gi|183575756|gb|EDT96284.1| putative domain of unknown function [Streptococcus pneumoniae
           CDC3059-06]
          Length = 256

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 79/212 (37%), Gaps = 16/212 (7%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM----ISHVDKS 124
           +A  +S  V     + +     +   I  +++    F   +   +  L+    +S +   
Sbjct: 43  IAFYSSFSVFIMAIISTIKRFSQSKEIKWRLIFTVSFSSVLGGFLGYLIFQVLLSQLSVR 102

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-L 183
            ++    I   +M ++           +F       I G++ G +S  LG+GGG     L
Sbjct: 103 LVSIVQMILLFVMLLVSFVLTDFKKTYQFDKIGFYMICGLLLGLISSFLGIGGGPLNVSL 162

Query: 184 LMLFYGASIYKATATSAGVSALIAFPA-LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           LM+F+  SI +AT  S  +           + + +G     L P          V +I  
Sbjct: 163 LMVFFSISIKEATMYSLAIIFFSQLSHLATIVVVTGLNQYHLAP----------VPVIFL 212

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            SI    L T +S ++ + ++   F  ++F  
Sbjct: 213 ASICGGVLGTVVSKVLPENWVRYCFKGMLFFV 244


>gi|71906119|ref|YP_283706.1| hypothetical protein Daro_0479 [Dechloromonas aromatica RCB]
 gi|71845740|gb|AAZ45236.1| Protein of unknown function DUF81 [Dechloromonas aromatica RCB]
          Length = 251

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 71/200 (35%), Gaps = 12/200 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+  A+F +G +  + G GGGL+ +PVL   F          +    GT+       + 
Sbjct: 5   TLLAPAAFFAGMVDAVVG-GGGLIQIPVLLGQF------PQTAIPTLFGTNKVASIAGTG 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   + R   I   ++        +     + +++ + +  +     +  + + +    
Sbjct: 58  AALWRYARRVRIPWAVVLPATVAALLGAWGGAALVAWLPRETMRPLVVVMMIAVAVYTFM 117

Query: 144 RDRLYCERKF----PDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
           +  L  +        D +   ++G + G   G  G G G F     +  +G    + +A+
Sbjct: 118 KKDLGQQVTRVIDGRDRWKGALFGGLIGVYDGFFGPGTGSFLIFGFVRLFGMDFVQGSAS 177

Query: 199 SAGVSALIAFPALLVRIYSG 218
           +  ++      A+      G
Sbjct: 178 AKVINFATNLSAIAFFASHG 197


>gi|167948496|ref|ZP_02535570.1| hypothetical protein Epers_18966 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 221

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 85/224 (37%), Gaps = 26/224 (11%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            +A+  SLG++A T+ ++ ++H + G +N+K+   +       T   +L+          
Sbjct: 1   QIAIAMSLGIVAVTATITAIQHWKRGNVNLKVTAMFGLFGVAGTYAGALLGVITPVVIQL 60

Query: 128 KAFAIFCLLMGILMLKRDRLYCER-------------KFPDNYVKYIWGMVTGFLSGALG 174
             FA+        MLK    +                + P      + G+  G L+G +G
Sbjct: 61  GLFAVVMYAAAWKMLKPKPQHRSVGAAAVIECDSGDCEAPHYGHIALHGIGVGILTGVVG 120

Query: 175 VGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           VGGG      ++   G S+ +A  TS  + AL +F        +     GL         
Sbjct: 121 VGGGFLIVPALVLLSGLSMKRAVGTSLSIVALKSFAGFAGYAGTVSVDYGL--------- 171

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              + I   I+I  +   + LS+ +  ++L  GF   +   +  
Sbjct: 172 ---MAIFTAIAIAGSFAGSMLSHRLPAEHLKKGFGGFLMLVASY 212



 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 36/83 (43%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             + M  A+GTSL ++A  S   F  +    +++  ++  +  +    +   S++   + 
Sbjct: 135 SGLSMKRAVGTSLSIVALKSFAGFAGYAGTVSVDYGLMAIFTAIAIAGSFAGSMLSHRLP 194

Query: 123 KSFLNKAFAIFCLLMGILMLKRD 145
              L K F  F +L+   +L + 
Sbjct: 195 AEHLKKGFGGFLMLVASYILIKS 217


>gi|157962459|ref|YP_001502493.1| hypothetical protein Spea_2638 [Shewanella pealeana ATCC 700345]
 gi|157847459|gb|ABV87958.1| protein of unknown function DUF81 [Shewanella pealeana ATCC 700345]
          Length = 259

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 79/209 (37%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           ++ D   + I L+   + L+G +  + G GGGL+ +P L  A         +   VA+ T
Sbjct: 1   MTLDLTFELIALLFFVAMLAGFIDAIAG-GGGLLTIPALMWA--------GLPPTVALAT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  +     R G + +  +K  I    +   + ++ +  +D +FL       
Sbjct: 52  NKLQACGGSFFASFYFVRKGMVKLSDMKLSIACAFVGAALGTIAVQMIDPAFLEVFLPFL 111

Query: 134 CLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
            L +G   L   ++  E K          +   +  GF  G  G G G  F    +   G
Sbjct: 112 MLAIGGYFLFSKKISEEDKLQVLTPGVFAFTAALAVGFYDGFFGPGTGSFFALAFVSLAG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             + KATA +  ++      +L+     G
Sbjct: 172 YGLAKATAHAKILNFSTNIASLIFFAIGG 200


>gi|315453033|ref|YP_004073303.1| hypothetical protein HFELIS_06290 [Helicobacter felis ATCC 49179]
 gi|315132085|emb|CBY82713.1| conserved hypothetical integral membrane protein [Helicobacter
           felis ATCC 49179]
          Length = 276

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 79/219 (36%), Gaps = 32/219 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ V  F++G  +G FG+GGG ++VP     F             A+G SL  +  +S+
Sbjct: 8   LVLGVVGFVTGITAGFFGIGGGEIVVPA--AIFAGFSYSH------AVGISLSQMLFSSL 59

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +    + + G +++K          +  ++ S ++  +D   L   F +      +    
Sbjct: 60  VGSFINYKKGLLDLKEGFFAAMGGLMGAILGSFLLKLIDDRILMGVFVVVVCYTFVKYAF 119

Query: 144 RD-----------RLYCERKFPDN------------YVKYIWGMVTGFLSGALGVGGGIF 180
                        +++ +   P               +  + G VTG  S  LG+GGGI 
Sbjct: 120 SPSNASNQHSAHFKMHSKPHKPKPIKSFTWGISREHGILILAGFVTGIFSIPLGMGGGIL 179

Query: 181 TNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
               + ++     +K            +   ++   +SG
Sbjct: 180 MVPFLGYFLKYDTHKIVPLGLFFVIFSSLSGVISLYHSG 218


>gi|78484519|ref|YP_390444.1| hypothetical protein Tcr_0174 [Thiomicrospira crunogena XCL-2]
 gi|78362805|gb|ABB40770.1| Conserved hypothetical protein with DUF81 [Thiomicrospira crunogena
           XCL-2]
          Length = 254

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 84/232 (36%), Gaps = 17/232 (7%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL                VA+  SL ++   SV S + + R G +  + +  +     
Sbjct: 27  VPVLVYVV-------GQDPKVAIAGSLMIVGIISVFSALPYARQGLVKWRTVFIFGIPGM 79

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW--GMVT 166
           +   V +    +V  +     F+   L    LM +  +L  +    +  +  I   G+  
Sbjct: 80  LGAFVGAWGAHYVSNAMQMLIFSALLLSAAYLMFRPVKLEEDTPTQERAIYKIALDGLAV 139

Query: 167 GFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G ++G +GVGGG      ++   G S+  A  TS  + A  +F      ++    L    
Sbjct: 140 GAVTGLVGVGGGFLIIPALVLLGGLSMRLAVGTSLVIIAAKSFVGFYEYLHVLESLALS- 198

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                 ++   + +   I I+   L  ++S  + +  L   F+  +      
Sbjct: 199 ------IDWYVIGMFSAIGIVGGWLGHRVSNRVNQAMLKRIFAFFLVIMGAY 244



 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 50/109 (45%), Gaps = 12/109 (11%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH-----RRHGTINMKIL 100
            +++P L            + M +A+GTSL +IA  S + F E+         +I+  ++
Sbjct: 152 FLIIPALVLL-------GGLSMRLAVGTSLVIIAAKSFVGFYEYLHVLESLALSIDWYVI 204

Query: 101 KDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
             +  +  +   +   + + V+++ L + FA F ++MG  +L ++    
Sbjct: 205 GMFSAIGIVGGWLGHRVSNRVNQAMLKRIFAFFLVIMGAYILYKNMPSL 253


>gi|302878952|ref|YP_003847516.1| hypothetical protein Galf_1741 [Gallionella capsiferriformans ES-2]
 gi|302581741|gb|ADL55752.1| protein of unknown function DUF81 [Gallionella capsiferriformans
           ES-2]
          Length = 263

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 85/257 (33%), Gaps = 37/257 (14%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           L G GGG++ VP L+             M  A   +L  +A  +++  M     G + ++
Sbjct: 18  LTGAGGGILAVPALTLGLGW-------TMASASPVALLTVATAALIGMMSGLLAGAVRIR 70

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK------ 152
                     I       +   + + +L   F    L++ + + +      +        
Sbjct: 71  AALLISATGIIAAPFGQHLAHRLSERWLTGLFVCVMLIVAVRLFRSTHPSAKNSTRARTC 130

Query: 153 ------------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATS 199
                               + G+ +G  +G LGVGGG      +L     +I    ATS
Sbjct: 131 VIDTKTGRISWNPLSFLKLSLIGLASGLSTGLLGVGGGFIVVPALLRCSDIAISGIIATS 190

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             V   ++  A++    SG      P          A+L +   +  +  L    +  I 
Sbjct: 191 LTVITFVSAGAVISAFSSGHLALTEP----------ALLFMAAAATGM-LLGRLFAPKIP 239

Query: 260 KKYLTIGFSMIMFTTSF 276
              L    +M++F+ + 
Sbjct: 240 AIMLQRALAMLIFSVAL 256



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 8/122 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +    SG  +GL GVGGG ++VP L +          I +   + TSL VI   S  +
Sbjct: 149 LSLIGLASGLSTGLLGVGGGFIVVPALLRC-------SDIAISGIIATSLTVITFVSAGA 201

Query: 86  FMEHRRHGTINM-KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +     G + + +    ++       ++  L    +    L +A A+    + + +L R
Sbjct: 202 VISAFSSGHLALTEPALLFMAAAATGMLLGRLFAPKIPAIMLQRALAMLIFSVALFLLYR 261

Query: 145 DR 146
            R
Sbjct: 262 AR 263



 Score = 43.1 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 13/108 (12%)

Query: 171 GALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
              G GGGI     +    G ++  A+  +    A  A   ++  + +            
Sbjct: 17  ALTGAGGGILAVPALTLGLGWTMASASPVALLTVATAALIGMMSGLLA------------ 64

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G V I A L+I    I+  P    L++ + +++LT  F  +M   +  
Sbjct: 65  GAVRIRAALLISATGIIAAPFGQHLAHRLSERWLTGLFVCVMLIVAVR 112


>gi|326943512|gb|AEA19405.1| Permease [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 257

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 55/270 (20%), Positives = 102/270 (37%), Gaps = 36/270 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             II+  F+ G L G+ G+GG  ++ P L            I   VA+GT L   + T +
Sbjct: 3   ISIIMMGFIIGGLVGVTGIGGAALLTPFLLTL--------GISPSVAVGTDLVYNSITKM 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIFCLLM 137
               +H +  TIN K++K        + ++  ++I  +       +  +        +L 
Sbjct: 55  FGISQHWKQKTINFKLVKYLAIGSLPSAIIAVIIIHFLPIFHDNREGIIKYILGYVLILA 114

Query: 138 GILMLKRDRLYCERKFP---------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF- 187
            I +  +   Y E                +  + G + GF+ G   VG G    + M++ 
Sbjct: 115 AISIFIKTFFYNESTQSFFQKQTMVQKKNLTILIGAILGFIVGLTSVGSGSLFAIAMIYL 174

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           Y     +   T    + L+   A ++ +            +LG V+   ++ +L  SI  
Sbjct: 175 YRLKPSELVGTDITHAFLLVTVASILNM------------NLGNVDYLLLIHLLIGSIPG 222

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             L +K S  I  K L I  ++I+  +   
Sbjct: 223 VILGSKFSTKIPVKPLQIFLAIIIGVSGLK 252



 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 51/139 (36%), Gaps = 7/139 (5%)

Query: 4   LLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD 63
             YN S   F  K  +V    L I+   + G + GL  VG G +    +   ++L   + 
Sbjct: 123 FFYNESTQSFFQKQTMVQKKNLTILIGAILGFIVGLTSVGSGSLFAIAMIYLYRLKPSEL 182

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
                  +GT +        ++ + +   G ++  +L   +       ++ S   + +  
Sbjct: 183 -------VGTDITHAFLLVTVASILNMNLGNVDYLLLIHLLIGSIPGVILGSKFSTKIPV 235

Query: 124 SFLNKAFAIFCLLMGILML 142
             L    AI   + G+ ++
Sbjct: 236 KPLQIFLAIIIGVSGLKLV 254


>gi|289626650|ref|ZP_06459604.1| hypothetical protein PsyrpaN_16169 [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289649486|ref|ZP_06480829.1| hypothetical protein Psyrpa2_17338 [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|320322577|gb|EFW78670.1| hypothetical protein PsgB076_21652 [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|330869625|gb|EGH04334.1| hypothetical protein PSYAE_20730 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330888714|gb|EGH21375.1| hypothetical protein PSYMO_07634 [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 261

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 98/271 (36%), Gaps = 39/271 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +VA  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   FVVAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + HR++  I+ K+            ++T   +S +        + + +A     LL  +
Sbjct: 60  VLVHRKNDNIDWKVTGLLTLGSVPAVLLTLWFLSTLHTAPEALNAIIKQALGFVLLLTAL 119

Query: 140 LMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + +L                     +  I G++ G +     +G G      L +L
Sbjct: 120 AVLFKKKLLAFAHGRGDGHSFFSGTSLTVLTVITGLILGTMVALTSIGAGALGTVALFIL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +              + GL   S+G +N   +  +L  S+ 
Sbjct: 180 YPLLPTRRLVGTEIAHAVPLTL------------VAGLGHASMGNMNWELLGWLLMGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              L + ++  +    L    ++++    F 
Sbjct: 228 GIYLGSHMAGRVSDDLLRPFLAIMLGMIGFK 258



 Score = 42.0 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 46/120 (38%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 148 VLTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G +N ++L   +        + S M   V    L    AI   ++G  ++ 
Sbjct: 202 VAGLGHASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDDLLRPFLAIMLGMIGFKLVF 261



 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                 + G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 4   GGLGFVVAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 61


>gi|224418685|ref|ZP_03656691.1| hypothetical protein HcanM9_05351 [Helicobacter canadensis MIT
           98-5491]
 gi|253826779|ref|ZP_04869664.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313142207|ref|ZP_07804400.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|253510185|gb|EES88844.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313131238|gb|EFR48855.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
          Length = 250

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 100/264 (37%), Gaps = 24/264 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  +  + L+  A+FL+G +  + G GGG++ +P L                 ++ T+  
Sbjct: 2   EFEISTLILLFFAAFLAGFIDSIAG-GGGMITLPALLL--------SGASPLESLATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  S  +     + G +N+K    +  ++ I + + ++ +  ++  FL+K      ++
Sbjct: 53  QSSFGSFSATRHFYKKGYLNLKKCLPFAILVFIFSSLGTISVQFINIDFLSKFLPFLIMI 112

Query: 137 MGILMLKRDRLYCERKFP--DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
            G   L   ++  +++         ++     GF  G  G G G F  L ++   G  I 
Sbjct: 113 FGFYFLFSPKISEDQRATHFHKAYLFLALAGIGFYDGFFGPGTGSFLMLALIALGGLGIT 172

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A A +   +      +L+     G  L G+             L++     +   L ++
Sbjct: 173 NALAEAKLYNFSTNLASLIFFAIGGNMLFGIG------------LVMAVGQFIGANLGSR 220

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
            +   G K +     ++ F+ +  
Sbjct: 221 AAIKYGIKIIKPLIVIVSFSMAAK 244


>gi|119945169|ref|YP_942849.1| permease [Psychromonas ingrahamii 37]
 gi|119863773|gb|ABM03250.1| permease with 5 transmembrane domains [Psychromonas ingrahamii 37]
          Length = 268

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 81/219 (36%), Gaps = 13/219 (5%)

Query: 4   LLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD 63
            L N   +  L+ +  ++ I L+   + L+G +  + G GGGL+ +P L  A        
Sbjct: 3   FLLNTKRVQSLAIELSLEIISLLFAVAILAGFIDAIAG-GGGLLTIPALMWA-------- 53

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            +   VA+GT+       S  + +   R G + +  +K  I    I   + ++ +  +D 
Sbjct: 54  GLPPTVALGTNKLQACGGSFFASVYFVRKGRVVLAEMKLAILCAFIGAALGTIAVQLIDI 113

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVG-GGI 179
            +L        L +G   L   ++      +            +  G   G  G G G  
Sbjct: 114 IYLEMILPFLMLAIGGYFLFSKKISEDDCHQLLTPAVFALTAALGVGLYDGFFGPGTGSF 173

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           F    +   G  + KATA +  ++      +L+     G
Sbjct: 174 FALAFVSLSGYGLAKATAHAKVLNFSTNIASLIFFALGG 212


>gi|192360815|ref|YP_001982814.1| hypothetical protein CJA_2354 [Cellvibrio japonicus Ueda107]
 gi|190686980|gb|ACE84658.1| Domain of unknown function domain protein [Cellvibrio japonicus
           Ueda107]
          Length = 333

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 84/253 (33%), Gaps = 24/253 (9%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   L+  + G  G+  GL     L                +A  +       T+ +S 
Sbjct: 93  LLVGLLAQIVDGALGMAYGLTSTSFLLA--------TGASPALASASVHMAEVFTTGISG 144

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML---K 143
           + H + G ++ K+    +    +  ++ +++++ +D   L     ++ LLMG  +L    
Sbjct: 145 VSHAKFGNVDKKLFVRLLVPGIVGGLLGAVLVTQIDGDTLKPFITVYLLLMGAYVLSKAF 204

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
           R  +   +  P +  K     + GF+  + G G G      ++  G        +     
Sbjct: 205 RKHIATRKGEPKHVAKLAL--LGGFVDTSGGGGWGPVVTTTLVGTGHDPRTTIGSVNFAE 262

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
             +   +             L   S+  V    V+ ++   +   P A         + L
Sbjct: 263 FFLTLTSAASLFI-------LVEESIWHV----VIGLIVGGLFAAPFAAYACKKFSTRTL 311

Query: 264 TIGFSMIMFTTSF 276
            I   +++   S 
Sbjct: 312 LILVGLLISGISL 324


>gi|266620960|ref|ZP_06113895.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
 gi|288867382|gb|EFC99680.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
          Length = 260

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 91/273 (33%), Gaps = 34/273 (12%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + +I V + + GTL G+ G+ G   ++P++   +  M +       +++  S      +
Sbjct: 1   MLPVIAVMNLIVGTLVGVSGIAG--FLLPIVFTGYLGMDLS------LSLALSFISFLTS 52

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            ++    +++ G +++K             V+   +   +  +       +  L  G+ +
Sbjct: 53  GIIGSYRYQKQGQMDIKFGVLVGAGSIAGAVLGVKLNFMIPLTTAKMFLYLVVLASGLSI 112

Query: 142 LKRDRLYCERK----------------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
           L +      +                   +     ++G +TG +    G GG I    ++
Sbjct: 113 LLKKEKPETKSETPQEAQPASPVYTGLLANKPFVLLFGFITGAICSLSGAGGPILVMPIL 172

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           +  G  +  A   S   S  IA PA +  +      +  P   L  + + + +       
Sbjct: 173 VTLGMPVRTAVGVSLFDSIFIALPACVGYL------SNCPREGLLVLCLVSFICQAIGVF 226

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                    +  I  K L  G ++     +   
Sbjct: 227 F----GAGQAGRINVKILKKGVAVFSIAIAVYM 255



 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 50/122 (40%), Gaps = 10/122 (8%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +++  F++G +  L G GG ++++P+L            + +  A+G SL      ++ 
Sbjct: 145 FVLLFGFITGAICSLSGAGGPILVMPILVTL--------GMPVRTAVGVSLFDSIFIALP 196

Query: 85  SFMEHRRHGTINMKILKDWIFVL--PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + +  +      ++   +  +   I     +     ++   L K  A+F + + + M+
Sbjct: 197 ACVGYLSNCPREGLLVLCLVSFICQAIGVFFGAGQAGRINVKILKKGVAVFSIAIAVYMI 256

Query: 143 KR 144
             
Sbjct: 257 IG 258


>gi|254975599|ref|ZP_05272071.1| hypothetical protein CdifQC_09829 [Clostridium difficile QCD-66c26]
 gi|255092987|ref|ZP_05322465.1| hypothetical protein CdifC_10094 [Clostridium difficile CIP 107932]
 gi|255314728|ref|ZP_05356311.1| hypothetical protein CdifQCD-7_10287 [Clostridium difficile
           QCD-76w55]
 gi|255517402|ref|ZP_05385078.1| hypothetical protein CdifQCD-_09871 [Clostridium difficile
           QCD-97b34]
 gi|260683614|ref|YP_003214899.1| hypothetical protein CD196_1878 [Clostridium difficile CD196]
 gi|260687274|ref|YP_003218408.1| hypothetical protein CDR20291_1921 [Clostridium difficile R20291]
 gi|260209777|emb|CBA63589.1| putative membrane protein [Clostridium difficile CD196]
 gi|260213291|emb|CBE04843.1| putative membrane protein [Clostridium difficile R20291]
          Length = 222

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 83/213 (38%), Gaps = 18/213 (8%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + +H+A+GT+    +   + S   + + G IN  +LK  +    I +V+    +  + +
Sbjct: 8   GVPVHLAIGTNKFAASAGCISSAYRYAKSGKINNDLLKKLVPFTIIGSVLGVRCVLSISE 67

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGG 178
             LN    +  L++ I       L  E  F      +  +  +  ++ GF  G  G G G
Sbjct: 68  EILNVLVVVMILIVAIYTFISKNLGQEDNFEAVNKKNLRLGMLMALIMGFYDGFFGPGTG 127

Query: 179 IFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
            F     +  YG     A+A +  ++      +LL+ + +G             V+    
Sbjct: 128 TFLTFGFIKIYGYDFLHASANTKILNLTSNITSLLLFMINGQ------------VDYKIA 175

Query: 238 LIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           ++   + I+   +  K++   G K +   F ++
Sbjct: 176 IVFALVMIMGAYVGAKVAIKKGSKMIKPIFLVM 208


>gi|291288603|ref|YP_003505419.1| hypothetical protein Dacet_2709 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885763|gb|ADD69463.1| protein of unknown function DUF81 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 251

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 97/259 (37%), Gaps = 25/259 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++ A F +G L+ L G GG  + VP+L            +   VA  T+   I   S
Sbjct: 8   LAILLPAGFAAGLLNALAG-GGSFMTVPLLIF--------TGLEPTVANATNRLGIWIQS 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +    +    G             + +  +  + + + V      K FA F +LM ++  
Sbjct: 59  LAGTRKFSNMGYFPKVYSYTAAIPVGLGAISGAYLATIVSDDMFRKYFAFFMVLMTLVTF 118

Query: 143 KRDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            +      ++          +  +     G  SG +  G G       +  G  + +A A
Sbjct: 119 LKPGTKELKEDVKFTVWATVINSVVYFFIGIYSGFVQAGVGFLMTAACVMSGLDMVRAHA 178

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
               ++ + A  ++ + IY+G  +  LP  +LG         +   ++    ++ K+S  
Sbjct: 179 VKLFLNLIAATVSVAIFIYAG-KVLFLPAIALG-------SGMAFGAVTAANISVKVSNT 230

Query: 258 IGKKYLT---IGFSMIMFT 273
             K+ ++   I F++++  
Sbjct: 231 FLKRVVSVAIIIFAILLLV 249


>gi|323341524|ref|ZP_08081763.1| permease [Lactobacillus ruminis ATCC 25644]
 gi|323091045|gb|EFZ33678.1| permease [Lactobacillus ruminis ATCC 25644]
          Length = 281

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 75/243 (30%), Gaps = 43/243 (17%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +  A+G S+  +  TS  S +   R   +N+++         I  ++ +L+    +   L
Sbjct: 42  IKYAIGASIIAVIATSSGSTIAFLRDDVLNLRVAMFLEIFTTIGAIIGALLTGAFNPMIL 101

Query: 127 NKAFAIFCLLMGILMLKRDR------------------------------LYCERKFPDN 156
              F    +     M ++ R                                 + +  + 
Sbjct: 102 YVLFGALLVFSSWNMYRKLRRGQEVLKRVEPDKLAEKFKLNSSYYDKNLHKQIDYQVENI 161

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRI 215
                     G  SG LG+G G F  + M       +  ++ATS  +  + A  +  V  
Sbjct: 162 PGGAAIMFGAGLASGMLGIGSGAFKVMAMDGAMKMPLKPSSATSNLMMGVTAAASATVYF 221

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           ++G             + +   L I+        + +++  ++  K +   F  I+    
Sbjct: 222 FNGSIKPE--------IAVPLALGIIGG----ATVGSRIMQLLPSKIIRGIFIPILLYLG 269

Query: 276 FVF 278
              
Sbjct: 270 LQM 272



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 11/131 (8%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV--AMGT 73
            D  V+ I       F +G  SG+ G+G G         AF++M +D ++ M +  +  T
Sbjct: 154 IDYQVENIPGGAAIMFGAGLASGMLGIGSG---------AFKVMAMDGAMKMPLKPSSAT 204

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           S  ++  T+  S   +  +G+I  +I       +     V S ++  +    +   F   
Sbjct: 205 SNLMMGVTAAASATVYFFNGSIKPEIAVPLALGIIGGATVGSRIMQLLPSKIIRGIFIPI 264

Query: 134 CLLMGILMLKR 144
            L +G+ M+ +
Sbjct: 265 LLYLGLQMILK 275


>gi|148557278|ref|YP_001264860.1| hypothetical protein Swit_4384 [Sphingomonas wittichii RW1]
 gi|148502468|gb|ABQ70722.1| protein of unknown function DUF81 [Sphingomonas wittichii RW1]
          Length = 264

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/274 (18%), Positives = 94/274 (34%), Gaps = 39/274 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +A  L GT+ G+ GVGGG +M P+L   F        +    A+GT L   A T  
Sbjct: 6   WLNALAGLLVGTIVGMTGVGGGSLMSPILILLF-------GVAPATAVGTDLWFAAATKT 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF-----AIFCLLMG 138
           +  + H R  + + +I+           V+T +++           F         ++  
Sbjct: 59  VGSIVHHRQNSADHRIVGWLCLGSIPAAVLTLVLLFEFGGHQEKSGFIVTLLGGMLIITS 118

Query: 139 ILMLKRDRLYCERKFPD------------NYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
              L R RL       D              +    G V G L     VG G     L+L
Sbjct: 119 FATLFRRRLVHAMIDTDDEVKARRFIRFQPVLTVAAGAVLGTLVTLTSVGAGALGATLLL 178

Query: 187 FYGASIYKA---TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
                   A     T    +  +     +  + +G             V++  + ++L  
Sbjct: 179 MLYPLRLTARKLVGTDIMHAVPLTLVGGIGYLIAGS------------VDLRLLGMLLIG 226

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           SI    + ++L+  + ++ +    ++++F T   
Sbjct: 227 SIPGIVIGSRLTLWLDERIIQRCLAVVLFITGIK 260


>gi|257482095|ref|ZP_05636136.1| hypothetical protein PsyrptA_02437 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|330987503|gb|EGH85606.1| hypothetical protein PLA107_20938 [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011434|gb|EGH91490.1| hypothetical protein PSYTB_17520 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 261

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 98/271 (36%), Gaps = 39/271 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +VA  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   FVVAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + HR++  I+ K+            ++T   +S +        + + +A     LL  +
Sbjct: 60  VLVHRKNDNIDWKVTGLLTLGSVPAVLLTLWFLSTLHTAPEALNAIIKQALGFVLLLTAL 119

Query: 140 LMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + +L                     +  I G++ G +     +G G      L +L
Sbjct: 120 AVLFKKKLLTFAHGRGDGHSFFSGTSLTVLTVITGLILGTMVALTSIGAGALGTVALFIL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +              + GL   S+G +N   +  +L  S+ 
Sbjct: 180 YPLLPTRRLVGTEIAHAVPLTL------------VAGLGHASMGNMNWELLGWLLMGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              L + ++  +    L    ++++    F 
Sbjct: 228 GIYLGSHMAGRVSDDLLRPFLAIMLGMIGFK 258



 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 46/120 (38%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 148 VLTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G +N ++L   +        + S M   V    L    AI   ++G  ++ 
Sbjct: 202 VAGLGHASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDDLLRPFLAIMLGMIGFKLVF 261



 Score = 39.3 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                 + G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 4   GGLGFVVAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 61


>gi|329754336|gb|AEC03566.1| magnetosome protein MamO [alpha proteobacterium LM-5]
          Length = 591

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 68/218 (31%), Gaps = 48/218 (22%)

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + +   +    +K  I       ++   + + +  S +     +F L+M    + 
Sbjct: 382 AASLRNDKAQLVQWDKVKPLIPWGIAGVILGYFIGNAIGDSVVGILLGLFALIMAGKAVM 441

Query: 144 -----------------------------------RDRLYCERKFPDNYVKYIWGMVTGF 168
                                              R +         +    + G+  G 
Sbjct: 442 EILQPNAGEETAESISAAEAEDEMDELMALADGTSRPKASGLALPEGHARSAVLGLPMGL 501

Query: 169 LSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            SG LG+ GG+    L  + G  S+  A A S+ +    +    +V    G         
Sbjct: 502 FSGILGISGGVIEVPLQRYVGRISLQNAIANSSVLVFWASVAGSVVAFLHGS-------- 553

Query: 228 SLGFVNIGA----VLIILPISILITPLATKLSYMIGKK 261
           S G ++  A     L+++P + +   +  +L  ++  +
Sbjct: 554 STGLIHWEAPVTLALVMIPGAYVGGIIGARLMRVLPVR 591



 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 11/99 (11%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V     G  SG+ G+ GG++ VP+             I +  A+  S  ++   SV   
Sbjct: 493 AVLGLPMGLFSGILGISGGVIEVPLQRYV-------GRISLQNAIANSSVLVFWASVAGS 545

Query: 87  MEHRRHGT----INMKILKDWIFVLPITTVVTSLMISHV 121
           +    HG+    I+ +       V+     V  ++ + +
Sbjct: 546 VVAFLHGSSTGLIHWEAPVTLALVMIPGAYVGGIIGARL 584


>gi|308173216|ref|YP_003919921.1| integral inner membrane protein [Bacillus amyloliquefaciens DSM 7]
 gi|307606080|emb|CBI42451.1| putative integral inner membrane protein [Bacillus
           amyloliquefaciens DSM 7]
 gi|328911279|gb|AEB62875.1| putative integral inner membrane protein [Bacillus
           amyloliquefaciens LL3]
          Length = 254

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 98/268 (36%), Gaps = 36/268 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I+   F+ GTL GL GVGG  ++ P+L       GI+ S    +A+GT L   + T +  
Sbjct: 5   IVFMGFIVGTLVGLTGVGGAALLTPLLIVL----GINPS----IAVGTDLLYNSITKLFG 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + H +  T++ K++         +      ++             +  A      L+ I
Sbjct: 57  VVSHWKQRTVHFKLVGYLALGSIPSASAAIGVLHLFPAFHQHQEQIIKHALGYVLTLVAI 116

Query: 140 LM---------LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YG 189
            +         L+ +R   +       +  + G++ GF+ G   +G G    + ML+ + 
Sbjct: 117 SIIARLFFDKKLRPNRWQQKTLEEKRGLMILIGVIFGFIVGLTSIGSGSLFAIAMLYLFR 176

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
               +   T    + L+   A            GL   S G V+   VL +L  S+    
Sbjct: 177 MKTAEVVGTDIAHAFLLVTAA------------GLLNASFGSVDYLLVLNLLIGSVPGVL 224

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L +  S     + L    + I+  +   
Sbjct: 225 LGSFFSPKFSPRPLQFVMAAIILISGIK 252



 Score = 35.8 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+I+   + G + GL  +G G +    +   F+       +     +GT +         
Sbjct: 144 LMILIGVIFGFIVGLTSIGSGSLFAIAMLYLFR-------MKTAEVVGTDIAHAFLLVTA 196

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + +   G+++  ++ + +       ++ S          L    A   L+ GI ++
Sbjct: 197 AGLLNASFGSVDYLLVLNLLIGSVPGVLLGSFFSPKFSPRPLQFVMAAIILISGIKLI 254


>gi|288932751|ref|YP_003436811.1| hypothetical protein Ferp_2428 [Ferroglobus placidus DSM 10642]
 gi|288894999|gb|ADC66536.1| protein of unknown function DUF81 [Ferroglobus placidus DSM 10642]
          Length = 247

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 96/262 (36%), Gaps = 30/262 (11%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + V  F  G L GL G+GGG +M P L       GI       VA+GT L   + T   +
Sbjct: 3   LYVLGFFVGFLVGLTGMGGGALMTPALIFL----GIPPV----VAVGTDLLYNSITRFFA 54

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF--------LNKAFAIFCLLM 137
            + H + G +N+K     +        +++ ++  V +++        L +  A+  ++ 
Sbjct: 55  TVFHFKRGNVNVKASVFLLSGAIPGLALSTFLMLFVVENYGVNYLDILLTRVLALVLIIS 114

Query: 138 GILMLKRDRL-YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKA 195
               + +        + P N +  + G V GFL     VG G+   L +L + G      
Sbjct: 115 STATIYKTFFGKKSDEIPKNSLLILIGFVVGFLVQLTSVGSGVLVTLFLLIFTGMISKVV 174

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T      ++   A ++               +G V+     I++  S     L    +
Sbjct: 175 VGTELLFGFVLTLLASIIHA------------KIGNVDFQLASILITSSAPGVILGVYAN 222

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
             +  + L +  S ++     +
Sbjct: 223 SKVDDRALRLILSFVILFMGII 244



 Score = 39.3 bits (91), Expect = 0.69,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 7/119 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+I+  F+ G L  L  VG G V+V +    F  M         V +GT L      +++
Sbjct: 136 LLILIGFVVGFLVQLTSVGSG-VLVTLFLLIFTGM------ISKVVVGTELLFGFVLTLL 188

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + + H + G ++ ++    I       ++     S VD   L    +   L MGI++L+
Sbjct: 189 ASIIHAKIGNVDFQLASILITSSAPGVILGVYANSKVDDRALRLILSFVILFMGIILLR 247


>gi|325106960|ref|YP_004268028.1| hypothetical protein Plabr_0379 [Planctomyces brasiliensis DSM
           5305]
 gi|324967228|gb|ADY58006.1| protein of unknown function DUF81 [Planctomyces brasiliensis DSM
           5305]
          Length = 359

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 85/244 (34%), Gaps = 19/244 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I ++       +G   +GGG V  PVL   F   G      M    G ++  I   S  +
Sbjct: 47  IALSMAFGSYFAGSTPMGGGTVGFPVLVLLFDYPG-----AMGRNFGLAIQSIGMVS-AA 100

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                    +N K+L+  +    I T + +  +   +   ++   FAI     G++ L +
Sbjct: 101 IYIFSVRTPVNWKLLRPAMIGSVIGTPLGAAFVAPFLPDIWVKLLFAIVWASFGLMHLVK 160

Query: 145 DRLYCERKF-------PDNYVKYIWGMVTGFLSGALGVGGGIFT-NLLMLFYGASIYKAT 196
            +               D Y+ +  G   G ++   GVG  +     L+L Y   +  A 
Sbjct: 161 LKELVNSHETDVTWGRLDPYIGFALGASGGIVASLTGVGIDMMLYACLVLLYRCDLKIAV 220

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWS-LGFVNIGAVLIILPISILITPLATKLS 255
            TS  + A  +   + V +        + P S   F N  A   ++    L  P    + 
Sbjct: 221 PTSVVIMAFTSVVGIGVNVLLSRLNPAVYPMSPAVFANWLAAAPVVA---LGAPFGALVV 277

Query: 256 YMIG 259
            +I 
Sbjct: 278 NLIS 281


>gi|226306578|ref|YP_002766538.1| hypothetical protein RER_30910 [Rhodococcus erythropolis PR4]
 gi|226185695|dbj|BAH33799.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
           PR4]
          Length = 315

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 88/260 (33%), Gaps = 25/260 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA-MGTSLGVIAPT 81
           + L  +    +  + G  G+  G+     L     L     S  +H+A +GT+L      
Sbjct: 4   LLLFTLVGVGAQLVDGALGMAFGVTAT-TLLMIGGLGPAQASAAVHLAEVGTTLA----- 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              S + H +   I+ K++        +   + + ++S +         A   L +GI +
Sbjct: 58  ---SGVSHWKFKNIDWKLVAKLGVPGAVGAFIGATVLSGLSTEAAVPITATILLAIGIYV 114

Query: 142 LKRDRLYC-----ERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYK 194
             R  +        R  P         G+  GF+  + G G G  T   +L  G  +   
Sbjct: 115 ALRFSVRPPAVADARTTPHTARFLSPLGLFGGFIDASGGGGWGPITTSTLLSRGKTAPRT 174

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
              + +    L+A  A L  +       GL   S G  N+  V  +    ++  P A  L
Sbjct: 175 VIGSVSASEFLVASAASLGFLV------GLGRESAG--NLLVVAGLALGGVIAAPFAAWL 226

Query: 255 SYMIGKKYLTIGFSMIMFTT 274
              +    L      ++  T
Sbjct: 227 VSRVPATLLGTAVGGVIVLT 246


>gi|94498747|ref|ZP_01305296.1| hypothetical protein SKA58_14342 [Sphingomonas sp. SKA58]
 gi|94421797|gb|EAT06849.1| hypothetical protein SKA58_14342 [Sphingomonas sp. SKA58]
          Length = 304

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 93/278 (33%), Gaps = 56/278 (20%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           +FGVGGG +  P+L       GI  ++        +   +   SV   + H   GT++ +
Sbjct: 30  MFGVGGGFLTTPLLIF----YGIPPTVAAAS----AASQVTGASVSGVVTHMSRGTVDFR 81

Query: 99  ILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFC-------------LLMGIL 140
           +    I    +   +   +   +       + +   + +                L+ + 
Sbjct: 82  MGGVLIAGGIVGAGMGVFIFRLLQSLGQIDTVIGILYVLMLGGIGGLMAKESIQALIALK 141

Query: 141 MLKRDRLYCERKFP------------------DNYVKYIWGMVTGFLSGALGVGGGIFTN 182
             ++ +    R  P                       ++ GM TG L+  LGVGGG    
Sbjct: 142 TGRKPQASKRRHHPLVAALPMRWRFYRSGLYISPLAPFLLGMATGILTMLLGVGGGFILV 201

Query: 183 LLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
             ML+  G +      TS      +     ++   +              V++   +++L
Sbjct: 202 PAMLYLLGMTTQSVVGTSLFQILFVTMATTMMHAMTTKA-----------VDLVLAMLLL 250

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             S+    + T+LS  +  +YL +  + I+   +   A
Sbjct: 251 IGSVTGAQIGTRLSMKLRPEYLRVLLAAIVLLVAARMA 288



 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +    +G L+ L GVGGG ++VP +            +     +GTSL  I   ++ + 
Sbjct: 179 FLLGMATGILTMLLGVGGGFILVPAMLYLL-------GMTTQSVVGTSLFQILFVTMATT 231

Query: 87  MEH-RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H      +++ +    +        + + +   +   +L    A   LL+   M    
Sbjct: 232 MMHAMTTKAVDLVLAMLLLIGSVTGAQIGTRLSMKLRPEYLRVLLAAIVLLVAARMALGL 291

Query: 146 RLYCER 151
               + 
Sbjct: 292 GWRPDE 297


>gi|42525707|ref|NP_970805.1| hypothetical protein TDE0189 [Treponema denticola ATCC 35405]
 gi|41815718|gb|AAS10686.1| membrane protein, putative [Treponema denticola ATCC 35405]
          Length = 262

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 77/205 (37%), Gaps = 16/205 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +  +    FL+G +    G GGGL+ +P              +  H+A+G +    A
Sbjct: 5   LQAMIFLCFCVFLAGFVDSAAG-GGGLISIPAYFFV--------GLPAHMAIGCNKFSAA 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  S     +HG +  +I         I++ +   +   +D+ FL KA  +    + +
Sbjct: 56  CGTTFSAFRFFKHGALEWRIALVSALFSFISSYLGMKIALGIDQVFLKKAMILILPAIAV 115

Query: 140 LMLKR------DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           ++L +      ++     +     +  + G   GF  G +G G G    +    +    +
Sbjct: 116 ILLLKRNFGNENKSKEIPQKKTFVLAALIGACVGFYDGLIGPGTGTIAIIAYSAWMKYDL 175

Query: 193 YKATATSAGVSALIAFPALLVRIYS 217
             A+  +  ++    + +L   + +
Sbjct: 176 KTASGNAKLLNLASNYASLTAVLIN 200


>gi|239908763|ref|YP_002955505.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
 gi|239798630|dbj|BAH77619.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
          Length = 299

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 99/294 (33%), Gaps = 78/294 (26%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           L G+GGG ++VP+L+  ++           VA+  S+ V+   +    + + +   I++ 
Sbjct: 20  LVGIGGGPILVPMLATLYRF-----DTPTIVAV--SVLVVFCNTASGTIAYLKERRIDLV 72

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML--------------KR 144
               +        +++ + + ++  +  +  F  F +L+ + +                 
Sbjct: 73  SGIKFSLAAIPGALLSVVALHYIKINVFSFIFGFFLVLLALYIFLRPYGARFAGSRGMFP 132

Query: 145 DRLYCERKFPDNYVK---------------------------------------YIWGMV 165
            R     K   +                                           I   +
Sbjct: 133 KRFRPGNKKSGHSRLSLDDDFLDAMEEPETTLVQRVITDRSGNRYAYAVNEKLGIILTAI 192

Query: 166 TGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            G +S  LG+GGG+    ++++     ++ ATATS  ++A+ A             ++G 
Sbjct: 193 IGAVSTLLGIGGGLIQVPVLVYVLAFPVHVATATSHFITAVNA-----GFTLIPLLVDGD 247

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             +          + +   +++      +LS  IG K L     +++    F+F
Sbjct: 248 LDYKT-------SICLSIGAVVGAQFGARLSNFIGDKAL-----LLLLVPVFIF 289



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 7/119 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I+ + + G +S L G+GGGL+ VPVL           +  +HVA  TS  + A  +  
Sbjct: 185 LGIILTAIIGAVSTLLGIGGGLIQVPVLVYVL-------AFPVHVATATSHFITAVNAGF 237

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + +     G ++ K          +     + + + +    L        + MG+ ++ 
Sbjct: 238 TLIPLLVDGDLDYKTSICLSIGAVVGAQFGARLSNFIGDKALLLLLVPVFIFMGVKLMF 296


>gi|221065582|ref|ZP_03541687.1| protein of unknown function DUF81 [Comamonas testosteroni KF-1]
 gi|220710605|gb|EED65973.1| protein of unknown function DUF81 [Comamonas testosteroni KF-1]
          Length = 264

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 85/263 (32%), Gaps = 40/263 (15%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +     GT+ GL G GGG+  VP L       G++ S    +A+          +
Sbjct: 1   MWMSALLGVAIGTVMGLTGAGGGIFAVPALVMVL---GMEQSTAGSIALLAVGAAALLGA 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V       R G +  K       +  ++      +   +   +L+  FA   LL+   M 
Sbjct: 58  VQGL----RQGVVRYKAAMLLAVMGSVSAPPGLYLAQLLSPQWLSLLFATVMLLVAARMW 113

Query: 143 KRDRLYCERKFPDN--------------------YVKYIWGMVTGFLSGALGVGGGIFTN 182
              +   E +                            + G++ G  +G LGVGGG    
Sbjct: 114 HSAKKPTELEISSTSKVCAISPDTGRFLWNIRTFLALSLVGLIAGLFTGMLGVGGGFIIV 173

Query: 183 LLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
             + +     +    ATS  V AL+    + +    G  +              ++   +
Sbjct: 174 PALAYLSNLRMQSIVATSLLVIALLCAVTVGMAFSKGLQIT------------PSIASFV 221

Query: 242 PISILITPLATKLSYMIGKKYLT 264
             +++   +   LS  I +  L 
Sbjct: 222 VAAMVGMLVGRSLSSRIPQAKLQ 244



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 7/125 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +     + +   ++G  +G+ GVGGG ++VP L+          ++ M   + TSL VIA
Sbjct: 144 IRTFLALSLVGLIAGLFTGMLGVGGGFIIVPALAYL-------SNLRMQSIVATSLLVIA 196

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
               ++       G      +  ++    +  +V   + S + ++ L + FA+ C+ +  
Sbjct: 197 LLCAVTVGMAFSKGLQITPSIASFVVAAMVGMLVGRSLSSRIPQAKLQQVFAVACVAVAG 256

Query: 140 LMLKR 144
           LM  R
Sbjct: 257 LMAAR 261


>gi|50842975|ref|YP_056202.1| hypothetical protein PPA1497 [Propionibacterium acnes KPA171202]
 gi|289426493|ref|ZP_06428236.1| conserved hypothetical protein [Propionibacterium acnes SK187]
 gi|289428689|ref|ZP_06430372.1| conserved hypothetical protein [Propionibacterium acnes J165]
 gi|295131046|ref|YP_003581709.1| hypothetical protein HMPREF0675_4564 [Propionibacterium acnes
           SK137]
 gi|50840577|gb|AAT83244.1| conserved membrane protein [Propionibacterium acnes KPA171202]
 gi|289153221|gb|EFD01939.1| conserved hypothetical protein [Propionibacterium acnes SK187]
 gi|289158087|gb|EFD06307.1| conserved hypothetical protein [Propionibacterium acnes J165]
 gi|291376692|gb|ADE00547.1| conserved hypothetical protein [Propionibacterium acnes SK137]
 gi|332675926|gb|AEE72742.1| hypothetical protein PAZ_c15840 [Propionibacterium acnes 266]
          Length = 255

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 102/257 (39%), Gaps = 22/257 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++A+F++G ++ + G GGGL+M+P L     L+G+     +   +GT+       ++ +
Sbjct: 9   LVLAAFMAGWVNAVVG-GGGLIMLPSL-----LVGLPTETPVATIVGTNKVAQVVGNLTA 62

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + + R    + ++      +  +  V+ + +++++ ++       +  +++GI   +R 
Sbjct: 63  GVGYLRKQRPDWRMFLWTAVLAGLGAVLGARIVTYMSRAVYTPILLVVLVIIGIYTWRRP 122

Query: 146 RLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAG 201
            L             +  I G+  G   GA+G G G F  L  +   G S  KA+  +  
Sbjct: 123 SLGAGHNGEGGKHPILVPIIGLFLGCYDGAIGPGVGTFWVLTYVAVGGYSFLKASGMAKI 182

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
            +A+     +                  G V       ++  ++L   +  + +   G  
Sbjct: 183 CNAVTNLVTITTLAIH------------GHVWWHIAWPLVISNVLGGLIGARTAMKHGNG 230

Query: 262 YLTIGFSMIMFTTSFVF 278
           ++   F ++    +   
Sbjct: 231 FVRTMFLIVTSVLAVRM 247


>gi|89072716|ref|ZP_01159281.1| predicted permease [Photobacterium sp. SKA34]
 gi|89051536|gb|EAR56990.1| predicted permease [Photobacterium sp. SKA34]
          Length = 254

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 99/259 (38%), Gaps = 26/259 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + + S +S TL+ L G G GL+  P+L            +   +A+ T         V +
Sbjct: 9   LFIGSLISNTLASLSGGGAGLIQFPLLIFL--------GLPFSIALATHKVASVALGVGA 60

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            ++H R GT+++K     I    I  ++ + +I    ++    A  +  L +GI  L + 
Sbjct: 61  AIKHLRQGTLSLKFTVYVILTGAIGVIIGANLILSFPENIAEAALGMLILCLGIYSLTKK 120

Query: 146 RL-----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA-T 198
            L        R      +  +   + G L+G+L  G G+F  L ++ ++G +  +A A T
Sbjct: 121 ELGQTETTQHRDMKGMVIGGLGLAIIGVLNGSLTAGTGLFVTLFLIRWFGFNYKQAVALT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
              V         +    +G             +    + ++L  S+L   L   L++  
Sbjct: 181 LVSVGLFWNGIGAVAIYQAGAP-----------IYWPWIPVLLLGSLLGGYLGAHLAHQK 229

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             + +   F  + F   F 
Sbjct: 230 SNQLIKSCFEALTFIIGFK 248


>gi|289627170|ref|ZP_06460124.1| hypothetical protein PsyrpaN_18869 [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289648730|ref|ZP_06480073.1| hypothetical protein Psyrpa2_13410 [Pseudomonas syringae pv.
           aesculi str. 2250]
          Length = 280

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 95/264 (35%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 30  LTTLAILAVVAFIAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 80

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     +    +     +++  ++   +LN+   +     G+
Sbjct: 81  FGSATASFTFYRRKLFHPRQWIHAVVGTAVGAAAGAVIAHYLPAEWLNQMLPVIVFGCGL 140

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G+  GF  G  G G G F T   +L Y   + KA
Sbjct: 141 YLLFGGTPKAPLDSNAPIKKKWQLPQGLGLGFYDGVAGPGTGAFWTVSTLLLYPVDLVKA 200

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V I+SG        + +G       L +    +L        +
Sbjct: 201 SGVARSMNFVSNAVALSVFIFSGQ-----VDYIIG-------LSMGLAVMLGAYFGAGTA 248

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 249 IKGGAKFIRPVFITVVLGLTVRLA 272


>gi|148997849|ref|ZP_01825413.1| hypothetical protein CGSSp11BS70_03039 [Streptococcus pneumoniae
           SP11-BS70]
 gi|168575015|ref|ZP_02720978.1| putative domain of unknown function [Streptococcus pneumoniae
           MLV-016]
 gi|147756348|gb|EDK63390.1| hypothetical protein CGSSp11BS70_03039 [Streptococcus pneumoniae
           SP11-BS70]
 gi|183578933|gb|EDT99461.1| putative domain of unknown function [Streptococcus pneumoniae
           MLV-016]
          Length = 256

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 77/212 (36%), Gaps = 16/212 (7%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS----HVDKS 124
           +A  +S  V     + +     +   I  +++    F   +   +  L+       +   
Sbjct: 43  IAFYSSFSVFIMAIISTIKRFSQSKEIKWRLIFTVSFSSVLGGFLGHLIFQVLLYQLSVR 102

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-L 183
            ++    I   +M ++           +F       I G++ G +S  LG+GGG     L
Sbjct: 103 LVSIVQMILLFVMLLVSFVLTDFKKTYQFDKIGFYMICGLLLGLISSFLGIGGGPLNVSL 162

Query: 184 LMLFYGASIYKATATSAGVSALIAFPA-LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           LM+F+  SI +AT  S  +           + + +G     L P          V +I  
Sbjct: 163 LMVFFSISIKEATMYSLAIIFFSQLSHLATIVVVTGLNQYHLAP----------VPVIFL 212

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            SI    L T +S ++ + ++   F  ++F  
Sbjct: 213 ASICGGVLGTVVSKVLPENWVRYCFKGMLFFV 244


>gi|89894741|ref|YP_518228.1| hypothetical protein DSY1995 [Desulfitobacterium hafniense Y51]
 gi|89334189|dbj|BAE83784.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 312

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 8/122 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +A  L   LS   GVGGG ++VP ++             M++  GTS   I  +S 
Sbjct: 192 IVVFIAGLLVAILSASLGVGGGFLLVPFMTSILGF-------PMYIVAGTSTLSILVSSS 244

Query: 84  MSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            S + +   G ++++  L   +  + I TVV + +  +++  ++     +    +G+   
Sbjct: 245 TSILNYLSMGSSLDLTFLAFELAGVAIGTVVAARLSKYINARYMKMFLGVLLFYIGLKYF 304

Query: 143 KR 144
             
Sbjct: 305 LP 306



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 12/125 (9%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLV 213
           +  V +I G++   LS +LGVGGG      M    G  +Y    TS     + +  ++L 
Sbjct: 190 NAIVVFIAGLLVAILSASLGVGGGFLLVPFMTSILGFPMYIVAGTSTLSILVSSSTSILN 249

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            +  G  L+           +  +   L    + T +A +LS  I  +Y+ +   +++F 
Sbjct: 250 YLSMGSSLD-----------LTFLAFELAGVAIGTVVAARLSKYINARYMKMFLGVLLFY 298

Query: 274 TSFVF 278
               +
Sbjct: 299 IGLKY 303


>gi|205356099|ref|ZP_03222866.1| hypothetical protein Cj8421_1511 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|205345942|gb|EDZ32578.1| hypothetical protein Cj8421_1511 [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 254

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 92/263 (34%), Gaps = 28/263 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y  ++   +  +G +  + G GGGL+ +P L            I  H+++ T+       
Sbjct: 10  YYFILFFVALFAGFIDSIVG-GGGLITLPALIAC--------GIPAHLSLTTNKLQSVFG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + + + +  T  +  L   +F   +   + S  +  V    L     IF  L  +  
Sbjct: 61  SFTATLTYFKSTT--LPHLAWGVFFTALGAAIGSYSVLFVKDEQLKLIILIFLTLTFLYT 118

Query: 142 LKRDRLYCERKFPD----NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
             R  L      P          I G+  GF  G LG G G F     +   G ++ KA 
Sbjct: 119 ALRPNLGKHESEPKIKNIKIFHLICGLTLGFYDGFLGPGTGSFWIFACVMLLGFNMRKA- 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S     L     ++      W    L  W++G       L++    +L   L +KL  
Sbjct: 178 --SINTKILNFTSNIIALAIFLWQYELL--WAVG-------LLMGVGQVLGAYLGSKLVL 226

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
               K++   F +++  T    A
Sbjct: 227 KTNGKFIKTLFLIVVGATIIKVA 249


>gi|23308838|ref|NP_600532.2| hypothetical protein NCgl1258 [Corynebacterium glutamicum ATCC
           13032]
 gi|62390194|ref|YP_225596.1| hypothetical protein cg1483 [Corynebacterium glutamicum ATCC 13032]
 gi|21324079|dbj|BAB98704.1| Predicted permeases [Corynebacterium glutamicum ATCC 13032]
 gi|41325530|emb|CAF20010.1| putative membrane protein [Corynebacterium glutamicum ATCC 13032]
          Length = 250

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 82/212 (38%), Gaps = 14/212 (6%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A   SL +I   +++  +     G + +K    +  +  + + V S + S++  S L   
Sbjct: 41  ATAASLIIIGLGALIGLISQYAAGHVRLKEGLSFGLLGLVGSFVGSHLASNIPDSLLLSG 100

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF---LSGALGVGGGIFTNLLML 186
           FAI  L++ + M+ + R   E       +  I    TG           GG      L+ 
Sbjct: 101 FAILTLVVALTMISKLRSTREYITRRPSILAIALSATGVGFLTGFFGVGGGFAIVPALIF 160

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
             G S+ +A+ATS  V A+ +       I  G+  + L       ++   +  I+  ++L
Sbjct: 161 ALGFSMRQASATSLVVIAVNS------AIAMGFRYSDLAS-----IDWSVISPIIITTVL 209

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 KL+  +    L +GF+  +   S   
Sbjct: 210 GAFSGVKLAKKVKASSLQLGFAGFLIFISIYM 241



 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 8/103 (7%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF-MEHRRHGTINMKILKDWIFV 106
           +VP L  A           M  A  TSL VIA  S ++    +    +I+  ++   I  
Sbjct: 154 IVPALIFALGF-------SMRQASATSLVVIAVNSAIAMGFRYSDLASIDWSVISPIIIT 206

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
             +       +   V  S L   FA F + + I M  ++    
Sbjct: 207 TVLGAFSGVKLAKKVKASSLQLGFAGFLIFISIYMGFQNFPDL 249


>gi|228901074|ref|ZP_04065283.1| hypothetical protein bthur0014_22740 [Bacillus thuringiensis IBL
           4222]
 gi|228858590|gb|EEN03041.1| hypothetical protein bthur0014_22740 [Bacillus thuringiensis IBL
           4222]
          Length = 252

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 107/265 (40%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  ++ + L+ + + L+G +  + G GGG++ +P++            +   VA+ T+  
Sbjct: 2   DFTIELLILLFLVAVLAGWIDTIAG-GGGMITIPIMLLV--------GMSPSVAIATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  ++M+ +   +   IN+K ++  I +    +V+   ++  +   +L        ++
Sbjct: 53  QGSSGTLMATVFFIKKKEINLKEMRLSILMTFFGSVLGGWLVLQIRAEYLIMILPFLLII 112

Query: 137 MGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           +G+  L    +  E   RK              GF  G  G G G    L  +L YG S 
Sbjct: 113 IGLYFLLSPNIANEDRPRKISMLLFALTVAPFLGFYDGFFGPGTGSLIALAFILLYGYSA 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++    F ALL  I  G        W++G       LI++   I+ + +  
Sbjct: 173 TRATANAKILNFTSNFAALLYFIIFGQ-----IDWTIG-------LIMMLGQIIGSYIGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           K+    G   +     ++ F  +  
Sbjct: 221 KMVLTKGTSLIRPIVVIVCFVMAIK 245


>gi|320330170|gb|EFW86156.1| hypothetical protein PsgRace4_10007 [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330875383|gb|EGH09532.1| hypothetical protein Pgy4_08283 [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 261

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 99/271 (36%), Gaps = 39/271 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +VA  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   FVVAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + HR++  I+ K+            ++T   +S +        + + +A     LL  +
Sbjct: 60  VLVHRKNDNIDWKVTGLLTLGSVPAVLLTLWFLSTLHTAPEALNAIIKQALGFVLLLTAL 119

Query: 140 LMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + +L                     +  I G++ G +     +G G      L +L
Sbjct: 120 AVLFKKKLLAFAHGRGDGHSFFSGTSLTVLTVITGLILGTMVALTSIGAGALGTVALFIL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +A +              + GL   S+G +N   +  +L  S+ 
Sbjct: 180 YPLLPTRRLVGTEIAHAAPLTL------------VAGLGHASMGNMNWELLGWLLMGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              L + ++  +    L    ++++    F 
Sbjct: 228 GIYLGSHMAGRVSDDLLRPFLAIMLGMIGFK 258



 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 47/120 (39%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   + L+           +GT +   AP ++
Sbjct: 148 VLTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAAPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G +N ++L   +        + S M   V    L    AI   ++G  ++ 
Sbjct: 202 VAGLGHASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDDLLRPFLAIMLGMIGFKLVF 261



 Score = 39.3 bits (91), Expect = 0.65,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                 + G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 4   GGLGFVVAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 61


>gi|189218300|ref|YP_001938942.1| permease [Methylacidiphilum infernorum V4]
 gi|189185158|gb|ACD82343.1| Predicted permease [Methylacidiphilum infernorum V4]
          Length = 122

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           SG  SG FG+GGG ++VP L   F        +   +A+GTSL +I P ++   + +   
Sbjct: 13  SGFASGCFGIGGGAIIVPSLILFF-------GLPYPMAVGTSLALIIPIALAGSIFNGFL 65

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             I+  I    +    I  VV   +I  V      K F++F L     +   
Sbjct: 66  QKIDWTIFGITLIFGIIGAVVGVAVIQKVPAGMAKKLFSLFLLYTAYRLWFG 117



 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 13/112 (11%)

Query: 167 GFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           GF SG  G+GGG      L+LF+G     A  TS  +   IA    +             
Sbjct: 14  GFASGCFGIGGGAIIVPSLILFFGLPYPMAVGTSLALIIPIALAGSIF------------ 61

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              L  ++     I L   I+   +   +   +        FS+ +  T++ 
Sbjct: 62  NGFLQKIDWTIFGITLIFGIIGAVVGVAVIQKVPAGMAKKLFSLFLLYTAYR 113


>gi|291456030|ref|ZP_06595420.1| putative integral membrane protein [Bifidobacterium breve DSM
           20213]
 gi|291382439|gb|EFE89957.1| putative integral membrane protein [Bifidobacterium breve DSM
           20213]
          Length = 267

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 93/243 (38%), Gaps = 34/243 (13%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VPVL               H A   SL ++  T+V+S M   R G +  +    +  V  
Sbjct: 30  VPVLVYLL-------GQEPHAASAGSLVIVGLTAVVSLMPRAREGHVRWRDGLVFGVVSS 82

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD---------------RLYCERKF 153
           +  V+ S     VD   L   F++  + +G+ M+++                        
Sbjct: 83  VGNVLGSRASLMVDAHMLMILFSVLLMAVGVFMVRKSCRMSQVGDAGTVAHADSGSTNPH 142

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
              ++       TG L+G  GVGGG     +++   G ++ +A++TS  V  + +   L+
Sbjct: 143 RSVWLLVACATATGALTGFFGVGGGFAVVPMLVLALGFTMREASSTSLLVMIIASAAGLM 202

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
            RI +              ++ G V++    S++   +    S  + +  LT  F+ ++F
Sbjct: 203 SRIGTSVS-----------IDWGIVIVFALASMIGGLVGAPASRRMREVVLTRLFAGLLF 251

Query: 273 TTS 275
             +
Sbjct: 252 IVA 254


>gi|220903637|ref|YP_002478949.1| hypothetical protein Ddes_0357 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219867936|gb|ACL48271.1| protein of unknown function DUF81 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 420

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 99/299 (33%), Gaps = 70/299 (23%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +     I     +G ++G  G GGG ++ P L            +   +A+GT L  I  
Sbjct: 75  NIFLASIAVGLAAGLITGCIGAGGGFIITPALMAV--------GVKGILAVGTDLFHIFA 126

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS-------HVDKSFLNKAFAIF 133
            ++M    H++ G ++ K+   ++    + T +   +          + + F++  +A+ 
Sbjct: 127 KAIMGTTVHKKLGNVSGKLAVAFLCGSVVGTFIGGAINKGLYNADPLLSELFISSIYAVL 186

Query: 134 CLLMGILML-----------------------------------------KRDRLYCERK 152
              +G   L                                           + L    +
Sbjct: 187 LGFLGFYALFDFLKSSRGGAAASQDAHGGSSGMTGISVKLQGLRVPPMISFDEDLVPGGR 246

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
               ++    G+  G L+  +GVGGG  T  + ++ +G S      T        A  A 
Sbjct: 247 RISGWIVAAGGVFVGLLAAIMGVGGGFVTFPMFVYIFGVSSMTTVGTDILQIIFTAGFAA 306

Query: 212 LVRIYSGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           +              +++ G+V     + +L  S+L   +    + ++   ++   +++
Sbjct: 307 IG------------QYAIYGYVFYTLAIGMLLGSLLGIQVGALTTKVVKGIHIRGFYAI 353



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 47/143 (32%), Gaps = 8/143 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++       G L+ + GVGGG V  P+    F        +     +GT +  I  T+ 
Sbjct: 251 WIVAAGGVFVGLLAAIMGVGGGFVTFPMFVYIF-------GVSSMTTVGTDILQIIFTAG 303

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            + +     +G +   +    +    +   V +L    V    +   +AI  +   I   
Sbjct: 304 FAAIGQYAIYGYVFYTLAIGMLLGSLLGIQVGALTTKVVKGIHIRGFYAISIIAGFINRA 363

Query: 143 KRDRLYCERKFPDNYVKYIWGMV 165
                        N+   + G++
Sbjct: 364 ATLPKKLVEMEVLNWSPKVVGII 386


>gi|33595611|ref|NP_883254.1| hypothetical protein BPP0929 [Bordetella parapertussis 12822]
 gi|33565689|emb|CAE40337.1| putative membrane protein [Bordetella parapertussis]
          Length = 284

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 83/257 (32%), Gaps = 46/257 (17%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +   +  +  L G+ G+  G+ +VP+L     L GID    +H A+  S+  +   S 
Sbjct: 6   LWLFAMALGASALGGMLGMASGIFIVPLLV----LWGID----VHAAIAASIVSVIACSC 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S     + G  ++++         +  + +  ++  V  + L   FA+  ++    ML 
Sbjct: 58  GSAAAFLQSGLTHVRLAVVLETATTLGALTSVFLVGAVPVAALYALFAVVLVVSAWQMLA 117

Query: 144 RD------------RLYCERKFPDNYVKYIWG-----------------MVTGFLSGALG 174
           R             R     +    Y     G                    G LS  LG
Sbjct: 118 RRRDPARASGAPACRWAGALRLHGRYRDPAAGRHRRYRVQRLPLGMSLMYGAGVLSALLG 177

Query: 175 VGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +G G+     M       +  ++ATS  +  + A  +  V    G             V 
Sbjct: 178 IGSGVLKIPAMDSALRLPLKVSSATSNFMIGVTAAASAAVYFARGEIDPA--------VA 229

Query: 234 IGAVLIILPISILITPL 250
               L  +  S+L   +
Sbjct: 230 GPVALGSVAGSVLGARI 246



 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 7/111 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G LS L G+G G++ +P +  A +L        + V+  TS  +I  T+  S   +   
Sbjct: 169 AGVLSALLGIGSGVLKIPAMDSALRL-------PLKVSSATSNFMIGVTAAASAAVYFAR 221

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           G I+  +           +V+ + ++ HV    L   F     L+ + ML 
Sbjct: 222 GEIDPAVAGPVALGSVAGSVLGARILMHVSGERLRLLFVAVLALLAVQMLL 272



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 43/123 (34%), Gaps = 12/123 (9%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
               +   +    L G LG+  GIF   L++ +G  ++ A A S       +  +    +
Sbjct: 5   GLWLFAMALGASALGGMLGMASGIFIVPLLVLWGIDVHAAIAASIVSVIACSCGSAAAFL 64

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            SG     L             +++   + L    +  L   +    L   F++++  ++
Sbjct: 65  QSGLTHVRL------------AVVLETATTLGALTSVFLVGAVPVAALYALFAVVLVVSA 112

Query: 276 FVF 278
           +  
Sbjct: 113 WQM 115


>gi|288870611|ref|ZP_06114697.2| putative membrane protein [Clostridium hathewayi DSM 13479]
 gi|288866559|gb|EFC98857.1| putative membrane protein [Clostridium hathewayi DSM 13479]
          Length = 267

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 75/195 (38%), Gaps = 16/195 (8%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           FL+G +  + G GGGL+ +P     +   G+      H+A+GT+       +V+S     
Sbjct: 31  FLAGFVDSIAG-GGGLISLPA----YLAAGVPP----HLALGTNKMGSTMGTVISTARFA 81

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL--- 147
           + G I  K+         + +++ S +     + FL         ++   +LK   +   
Sbjct: 82  KSGFIKWKLSLFAAACAIVGSIIGSNLSLLASEKFLKGMMLFALPVVAFYVLKNKDMGDN 141

Query: 148 YCERKFPDN---YVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVS 203
                 P+     V     ++ G   G  G G G F  L++       +  A+ T+  V+
Sbjct: 142 KDTGSLPEKKMLAVSMAAALLIGTYDGFYGPGTGTFLLLVLTGAAKMDLRTASGTTKVVN 201

Query: 204 ALIAFPALLVRIYSG 218
                 AL+  + +G
Sbjct: 202 LSSNIAALVTFLING 216


>gi|271966530|ref|YP_003340726.1| hypothetical protein Sros_5210 [Streptosporangium roseum DSM 43021]
 gi|270509705|gb|ACZ87983.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 312

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 71/214 (33%), Gaps = 15/214 (7%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A  T       T++ S + H R   I+ K++        +     +  +S +        
Sbjct: 43  ASATVHLAEIGTTLASGISHWRFDNIDWKVVAKIGIPGAVGAFAGATFLSSLSTEVAAPI 102

Query: 130 FAIFCLLMGILMLKRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
            +I  L +G  +L R   +        K          G+V GF+    G G G      
Sbjct: 103 MSIILLTLGAYILVRFTAFGLPRGNLGKPLRKRFLAPLGLVAGFVDATGGGGWGPVGTPA 162

Query: 185 MLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +L  G     K   +      L+A  A L  +  G G           +N G V ++L  
Sbjct: 163 ILASGRIPPRKVIGSIDASEFLVAIAASLGFLV-GIGSEN--------INFGWVGVLLLG 213

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            ++  P+A  L   I  + L      ++  T+  
Sbjct: 214 GVIAAPIAAWLVRHIPPRILGSAVGGVIILTNVR 247


>gi|254447239|ref|ZP_05060706.1| permease [gamma proteobacterium HTCC5015]
 gi|198263378|gb|EDY87656.1| permease [gamma proteobacterium HTCC5015]
          Length = 271

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 88/251 (35%), Gaps = 38/251 (15%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L   F        + M VA+GT L   A T       H+R  T+   ++       
Sbjct: 36  MTPILVSVF-------GVKMAVAVGTDLLYAAITKANGVWVHKRQKTVEWPVVSLLAAGS 88

Query: 108 PITTVVTSLMISHVD------KSFLNKAFAIFCLLMGILMLKRDRLYCERKF-------- 153
              +V T + +S +         +L     +   L  I++L R  L  ER+         
Sbjct: 89  LPASVATVVFLSLLQQRGIDYAQYLTITLGVMLTLTAIVLLIRPWLVSERQIVAEELGTE 148

Query: 154 ----PDNYVKYIWGMVTGFLSGALGVGGGIF--TNLLMLFYGASIYKATATSAGVSALIA 207
                   +  + G+  G L     VG G F    L++++    + +   T    +  + 
Sbjct: 149 KPSRKVAALTVVTGVALGILVTLSSVGAGAFGAAVLMVMYPRMPMIRVIGTDLAHAVPLT 208

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
             A    +             LG V+ G +L +L  S+    L TKL+  +   ++    
Sbjct: 209 LIAGTGHMLH-----------LGHVDFGLLLGLLIGSLPAIWLGTKLASRLPDAWIRPVM 257

Query: 268 SMIMFTTSFVF 278
           ++I+      +
Sbjct: 258 ALILLGLGIKY 268


>gi|160935167|ref|ZP_02082550.1| hypothetical protein CLOBOL_00062 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441898|gb|EDP19595.1| hypothetical protein CLOBOL_00062 [Clostridium bolteae ATCC
           BAA-613]
          Length = 250

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 93/261 (35%), Gaps = 24/261 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  +++ A+ + G   GL GV G   ++P++  +   MG+ + + +      S      +
Sbjct: 3   FWMIVMAANLVVGAFVGLTGVAG--FLLPIVYTSPLGMGVTEGLAL------SFAAFIVS 54

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             +  + + + G +++              V+   +   + +S +     +  LL GI +
Sbjct: 55  GALGSVNYNKAGNLDIPFGIRLSLGSLAGAVLGVKLNLIIPESTVKVILYVVVLLSGISI 114

Query: 142 LKRDRLYCERKFPDNYV------KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           L R     E       +        I G VTG +    G GG +    L++  G  I  A
Sbjct: 115 LLRKDKSQEESGRAYVISDHLAATLILGFVTGAVCSLSGAGGPVLVMPLLVVLGIGIRTA 174

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
              +   S  I  PA +  +      + LP  +   V  G  ++            ++ +
Sbjct: 175 VGVALFNSVFIGIPACIGYMMQCSVKDLLPVMAAALVFHGIGVV----------YGSRNA 224

Query: 256 YMIGKKYLTIGFSMIMFTTSF 276
             I +  L  G ++     + 
Sbjct: 225 VKINQILLKKGIAVFSILIAI 245


>gi|332702092|ref|ZP_08422180.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332552241|gb|EGJ49285.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 423

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/302 (16%), Positives = 109/302 (36%), Gaps = 74/302 (24%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I    ++G ++G  G GGG ++ P L        +   I   +A+GT L  I   ++M  
Sbjct: 78  IFIGLIAGLITGCIGAGGGFIITPAL--------MAAGIKGILAVGTDLFHIFAKAIMGT 129

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMIS-------HVDKSFLNKAFAIFCLLMGI 139
             H++ G +++K+   ++    I T +   +          + ++F++  ++I    +G 
Sbjct: 130 TVHKKLGNVSVKLALGFLAGASIGTFIGGAINKGLYDLNPLLSEAFISGVYSILLGFLGF 189

Query: 140 LML-----------------------------------------------KRDRLYCERK 152
             L                                                 + L    K
Sbjct: 190 YALLDFIRLSRTPRQVGSDVGDSPHGAEMTSGKVGLPARLQSMKVPPMITFDEDLVPGGK 249

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
               ++    G+V G L+  +GVGGG  T  + ++             GVS++      +
Sbjct: 250 SISGWIVAAGGLVVGMLAAIMGVGGGFVTFPMFVYV-----------FGVSSMTTVGTDI 298

Query: 213 VRIYSGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           ++I    GL  +  +++ G+V     + +L  S+L   +    + ++   Y+   +++ +
Sbjct: 299 LQIIFTAGLAAIAQYAIYGYVFYTLAMGMLLGSLLGIQVGALTTKVVKGIYIRGFYAVAI 358

Query: 272 FT 273
             
Sbjct: 359 LA 360



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++     + G L+ + GVGGG V  P+    F        +     +GT +  I  T+ 
Sbjct: 254 WIVAAGGLVVGMLAAIMGVGGGFVTFPMFVYVF-------GVSSMTTVGTDILQIIFTAG 306

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           ++ +     +G +   +    +    +   V +L    V   ++   +A+  L   I 
Sbjct: 307 LAAIAQYAIYGYVFYTLAMGMLLGSLLGIQVGALTTKVVKGIYIRGFYAVAILAGFIN 364


>gi|227892460|ref|ZP_04010265.1| permease [Lactobacillus salivarius ATCC 11741]
 gi|227865753|gb|EEJ73174.1| permease [Lactobacillus salivarius ATCC 11741]
          Length = 281

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 77/243 (31%), Gaps = 43/243 (17%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +  A+G S+  +  TS  S +   +   +N+++         I  +V +++      + L
Sbjct: 42  IKYAIGASIIAVIATSSGSTIAFLKDDVLNLRVAMFLEIATTIGAIVGAVLTGIFHPAIL 101

Query: 127 NKAFAIFCLLMGILMLKRDR------------------------------LYCERKFPDN 156
              F    +     M ++ R                                 + +  + 
Sbjct: 102 YFLFGSLLIFSSWNMYRKLRSGKEILKRAKPDKWAQKFNLNSSYFDKNLNKQIDYQVENI 161

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRI 215
                     G  SG LG+G G F  + M       +  ++ATS  +  + A  +  V  
Sbjct: 162 PGGLSIMFGAGIASGMLGIGSGAFKVMAMDNAMKMPLKPSSATSNLMMGVTAAASASVYF 221

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           ++G    G        + +   L I    ++   + +++   +  + + + F  I+    
Sbjct: 222 FNGSIKPG--------IAVPLALGI----LVGAAIGSRIMQHLPSRVIRMIFIPILLYLG 269

Query: 276 FVF 278
              
Sbjct: 270 LQM 272



 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 58/131 (44%), Gaps = 11/131 (8%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV--AMGT 73
            D  V+ I   +   F +G  SG+ G+G G         AF++M +D+++ M +  +  T
Sbjct: 154 IDYQVENIPGGLSIMFGAGIASGMLGIGSG---------AFKVMAMDNAMKMPLKPSSAT 204

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           S  ++  T+  S   +  +G+I   I       + +   + S ++ H+    +   F   
Sbjct: 205 SNLMMGVTAAASASVYFFNGSIKPGIAVPLALGILVGAAIGSRIMQHLPSRVIRMIFIPI 264

Query: 134 CLLMGILMLKR 144
            L +G+ M+ +
Sbjct: 265 LLYLGLQMIFK 275


>gi|190576438|ref|YP_001974283.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
 gi|190014360|emb|CAQ48007.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
          Length = 262

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 89/263 (33%), Gaps = 25/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++V +F++G +    G GGGLV +P L                +  GT+       +
Sbjct: 12  LWWLVVIAFIAGLVDAAVG-GGGLVQLPGLFTVLPQQ------TPAMLFGTNKFSSMFGT 64

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R+     K +        I +   +  +S + K  +     +  + M    L
Sbjct: 65  GAAAWRYARNVRFPWKPVLFAAGTAFIFSFAGATAVSLLPKDAVRPLVLVLLVAMLAYTL 124

Query: 143 KRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +       +       +  +    G   GF  G  G G G     L + F+G    +A+
Sbjct: 125 WKKDFGALHRPQEIGRRELVIALAIGAAIGFYDGFFGPGTGSFLIFLFVRFFGLDFLRAS 184

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A S  V+      A+   + +            G +     L +   +I+ + + T+L+ 
Sbjct: 185 AASKVVNLATNVAAISFFVPT------------GNILWLFALPMAAANIIGSVVGTRLAL 232

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F  ++       A
Sbjct: 233 KGGTPFIRKLFVGLVVVLIARMA 255


>gi|71733548|ref|YP_276366.1| hypothetical protein PSPPH_4248 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71554101|gb|AAZ33312.1| DUF81 [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 263

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 98/271 (36%), Gaps = 39/271 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +VA  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 10  FVVAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGG 61

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + HR++  I+ K+            ++T   +S +        + + +A     LL  +
Sbjct: 62  VLVHRKNDNIDWKVTGLLTLGSVPAVLLTLWFLSTLHTAPEALNAIIKQALGFVLLLTAL 121

Query: 140 LMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + +L                     +  I G++ G +     +G G      L +L
Sbjct: 122 AVLFKKKLLAFAHGRGDGHSFFSGTSLTVLTVITGLILGTMVALTSIGAGALGTVALFIL 181

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +              + GL   S+G +N   +  +L  S+ 
Sbjct: 182 YPLLPTRRLVGTEIAHAVPLTL------------VAGLGHASMGNMNWELLGWLLMGSLP 229

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              L + ++  +    L    ++++    F 
Sbjct: 230 GIYLGSHMAGRVSDDLLRPFLAIMLGMIGFK 260



 Score = 42.0 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 46/120 (38%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 150 VLTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAVPLTL 203

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G +N ++L   +        + S M   V    L    AI   ++G  ++ 
Sbjct: 204 VAGLGHASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDDLLRPFLAIMLGMIGFKLVF 263



 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                 + G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 6   GGLGFVVAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 63


>gi|148252672|ref|YP_001237257.1| hypothetical protein BBta_1101 [Bradyrhizobium sp. BTAi1]
 gi|146404845|gb|ABQ33351.1| putative membrane protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 261

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 50/206 (24%), Positives = 85/206 (41%), Gaps = 11/206 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + G   GL G GG ++ VP++      +G+ +    H+A+G+S   +A  + 
Sbjct: 8   VLGLLCGAMVGFSLGLVGGGGSVLAVPLMVYV---VGVPEP---HIAIGSSAIAVATNAA 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H R GT+   I   +     +     SL+   VD   L   FA+  +++ +LMLK
Sbjct: 62  VNLVNHARGGTVIWPIAALFAVAGIVGAFGGSLLGKMVDGQKLLALFALVMMVIAMLMLK 121

Query: 144 RDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
                     +    +      +G+ TG LSG  G+GGG      LM   G  I  A ++
Sbjct: 122 TRARVGIPDVKMSMANFPAILGFGLATGTLSGFFGIGGGFLIVPALMAATGMPIMNAVSS 181

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGL 224
           S                +SG     L
Sbjct: 182 SLVAVTTFGLTTAASYAWSGLVAWDL 207


>gi|108799892|ref|YP_640089.1| hypothetical protein Mmcs_2926 [Mycobacterium sp. MCS]
 gi|119869002|ref|YP_938954.1| hypothetical protein Mkms_2970 [Mycobacterium sp. KMS]
 gi|126435520|ref|YP_001071211.1| hypothetical protein Mjls_2941 [Mycobacterium sp. JLS]
 gi|108770311|gb|ABG09033.1| protein of unknown function DUF81 [Mycobacterium sp. MCS]
 gi|119695091|gb|ABL92164.1| protein of unknown function DUF81 [Mycobacterium sp. KMS]
 gi|126235320|gb|ABN98720.1| protein of unknown function DUF81 [Mycobacterium sp. JLS]
          Length = 312

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 89/260 (34%), Gaps = 25/260 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA-MGTSLGVIAPT 81
           + +I +    +  + G  G+  G V    L     +     S  +H+A +GT+L      
Sbjct: 4   LLIIALVGVGAQLVDGALGMAFG-VTASTLLVLSGVAAAQASAAVHLAEVGTTLA----- 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              S + H R   I+  I+        +   + + ++S +         A   + +G  +
Sbjct: 58  ---SGISHWRFKNIDWSIVAKLGVPGAVGAFLGATVLSALSTEDAAPLMAAILVCIGAYV 114

Query: 142 LKRDRLYCERKFPDNYVKYIW------GMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYK 194
           L R  L        N  K+        G+  GF+  + G G G  T   +L  G  +   
Sbjct: 115 LLRFSLRTPPVIGGNGTKHGAKFLTPLGLFGGFIDASGGGGWGPITTSTLLSSGKTAPRT 174

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
              + +    L+A  A +  +               F N+G V  +    ++  P+A  L
Sbjct: 175 VIGSVSASEFLVAASASVGFLVGLRDEF--------FDNLGVVAALAVGGVIAAPIAAWL 226

Query: 255 SYMIGKKYLTIGFSMIMFTT 274
              I    L  G   I+  T
Sbjct: 227 VSRISPALLGTGVGGIIVLT 246


>gi|90961164|ref|YP_535080.1| hypothetical protein LSL_0182 [Lactobacillus salivarius UCC118]
 gi|301299673|ref|ZP_07205928.1| putative membrane protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|90820358|gb|ABD98997.1| Hypothetical membrane spanning protein [Lactobacillus salivarius
           UCC118]
 gi|300852713|gb|EFK80342.1| putative membrane protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 281

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 77/243 (31%), Gaps = 43/243 (17%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +  A+G S+  +  TS  S +   +   +N+++         I  +V +++      + L
Sbjct: 42  IKYAIGASIIAVIATSSGSTIAFLKDDVLNLRVAMFLEIATTIGAIVGAILTGIFHPAIL 101

Query: 127 NKAFAIFCLLMGILMLKRDR------------------------------LYCERKFPDN 156
              F    +     M ++ R                                 + +  + 
Sbjct: 102 YFLFGSLLIFSSWNMYRKLRSGKEILKRAKPDKWAQKFNLNSSYFDKNLNKQIDYQVENI 161

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRI 215
                     G  SG LG+G G F  + M       +  ++ATS  +  + A  +  V  
Sbjct: 162 PGGLSIMFGAGIASGMLGIGSGAFKVMAMDNAMKMPLKPSSATSNLMMGVTAAASASVYF 221

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           ++G    G        + +   L I    ++   + +++   +  + + + F  I+    
Sbjct: 222 FNGSIKPG--------IAVPLALGI----LVGAAIGSRIMQHLPSRVIRMIFIPILLYLG 269

Query: 276 FVF 278
              
Sbjct: 270 LQM 272



 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 58/131 (44%), Gaps = 11/131 (8%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV--AMGT 73
            D  V+ I   +   F +G  SG+ G+G G         AF++M +D+++ M +  +  T
Sbjct: 154 IDYQVENIPGGLSIMFGAGIASGMLGIGSG---------AFKVMAMDNAMKMPLKPSSAT 204

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           S  ++  T+  S   +  +G+I   I       + +   + S ++ H+    +   F   
Sbjct: 205 SNLMMGVTAAASASVYFFNGSIKPGIAVPLALGILVGAAIGSRIMQHLPSRVIRMIFIPI 264

Query: 134 CLLMGILMLKR 144
            L +G+ M+ +
Sbjct: 265 LLYLGLQMIFK 275


>gi|332529923|ref|ZP_08405874.1| hypothetical protein HGR_08374 [Hylemonella gracilis ATCC 19624]
 gi|332040620|gb|EGI76995.1| hypothetical protein HGR_08374 [Hylemonella gracilis ATCC 19624]
          Length = 252

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 93/239 (38%), Gaps = 25/239 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + +AS L+G +  + G GGGL++VP L   +              +GT+       +
Sbjct: 3   LLFVSLASLLAGFVDAIVG-GGGLILVPALFATY------PGASAATLLGTNKSASVWGT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S  ++ R   +  + L   + +  I + + + +++ +  +FL K   +  L + +  L
Sbjct: 56  AFSATQYARRVELRWRALLPAMALTLIGSFLGAWLVTLISTAFLRKLLPLVLLAVLLYTL 115

Query: 143 KRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
            R  L            +  V    G++ GF  G  G G G F   LM+   G     A+
Sbjct: 116 ARKDLGRAHAPRYAGRAEAVVAGSIGLLIGFYDGLFGPGTGSFFIFLMVRLLGYDFLHAS 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           A +  ++      A+++                G V     L++   ++  + L T+L+
Sbjct: 176 AHAKLLNVCSNVAAIVLFGLR------------GHVWWHVALVLALANVAGSLLGTRLA 222


>gi|228921186|ref|ZP_04084516.1| hypothetical protein bthur0011_21940 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228838502|gb|EEM83813.1| hypothetical protein bthur0011_21940 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 252

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/265 (20%), Positives = 106/265 (40%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  ++ + L+ + + L+G +  + G GGG++ +P++            +   VA+ T+  
Sbjct: 2   DFTIELLILLFLVAVLAGWIDTIAG-GGGMITIPIMLLV--------GMSPSVAIATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  ++M+ +   +   IN+K ++  I +    +V    ++  +   +L        + 
Sbjct: 53  QGSSGTLMATVFFIKKKEINLKEMRLSILMTFFGSVFGGWLVLQIRAEYLIMILPFLLVF 112

Query: 137 MGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           +GI  L    +  E   RK            + GF  G  G G G    L  +L YG S 
Sbjct: 113 IGIYFLLSPNIANEDRPRKISMLLFALTVAPLLGFYDGFFGPGTGSLIALAFILLYGYSA 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++    F ALL  I  G        W++G       LI++   I+ + +  
Sbjct: 173 TRATANAKILNFTSNFAALLYFIIFGQ-----IDWTIG-------LIMMLGQIIGSYIGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           K+    G   +     ++ F  +  
Sbjct: 221 KMVLTKGTALIRPIVVIVCFVMAIK 245


>gi|146282764|ref|YP_001172917.1| hypothetical protein PST_2423 [Pseudomonas stutzeri A1501]
 gi|145570969|gb|ABP80075.1| membrane protein, putative [Pseudomonas stutzeri A1501]
 gi|327481102|gb|AEA84412.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 250

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 81/230 (35%), Gaps = 17/230 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G+   +   +A GT+L ++ P  +++   + +   I+ +          +  +V 
Sbjct: 30  AIPVLGVLFGLDQQLAQGTALVMVVPNVLLAIWRYHQRNRIDWRHAAALAGASFVFAIVG 89

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER-----KFPDNYVKYIWGMVTGFL 169
           + +   +D   +  AF  F L +    L R  L         +    ++  +        
Sbjct: 90  AAVAVSLDAGRMRLAFVGFLLALAAYTLLRVFLRPAPGDGQLRHSWPWLSVLGAGAGAAG 149

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
                 G  I T +L   +G S   A   S  ++A      L+                 
Sbjct: 150 GLFGVGGAVIATPILTSVFGTSQVVAQGLSLALAAPSTGVTLVTYALHQQ---------- 199

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             VN    L +    +L   L  +L++ + ++ L + FS  +  ++ + A
Sbjct: 200 --VNWLLGLPLAVGGLLSISLGVRLAHALPERLLRLLFSGFLVASAVLLA 247


>gi|257487862|ref|ZP_05641903.1| hypothetical protein PsyrptA_31603 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|330867975|gb|EGH02684.1| hypothetical protein PSYAE_12123 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|331008570|gb|EGH88626.1| hypothetical protein PSYTB_02459 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 259

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 95/264 (35%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 9   LTTLAILAVVAFIAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     +    +     +++  ++   +LN+   +     G+
Sbjct: 60  FGSATASFTFYRRKLFHPRQWIHAVVGTAVGAAAGAVIAHYLPAEWLNQMLPVIVFGCGL 119

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G+  GF  G  G G G F T   +L Y   + KA
Sbjct: 120 YLLFGGTPKAPLDSNAPIKKKWQLPQGLGLGFYDGVAGPGTGAFWTVSTLLLYPVDLVKA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V I+SG        + +G       L +    +L        +
Sbjct: 180 SGVARSMNFVSNAVALSVFIFSGQ-----VDYIIG-------LSMGLAVMLGAYFGAGTA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 IKGGAKFIRPVFITVVLGLTVRLA 251


>gi|167031558|ref|YP_001666789.1| hypothetical protein PputGB1_0542 [Pseudomonas putida GB-1]
 gi|166858046|gb|ABY96453.1| protein of unknown function DUF81 [Pseudomonas putida GB-1]
          Length = 263

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 85/249 (34%), Gaps = 25/249 (10%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G    + G GGGL+ +PVL  A    GI+       A+ T+    A  +V +     R 
Sbjct: 19  AGFFDAIAG-GGGLITLPVLFIA----GIEPLA----AIATNKFQAASATVSATCAFARK 69

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER- 151
           G I+ +       +  I   + +L I++V KS L        +L+            +  
Sbjct: 70  GMIDWRRGSSMAVMSFIGGALGALSITYVPKSLLQACVPPLLILIAAYFAFSPSPNEQAR 129

Query: 152 --KFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
             K   +          GF  G  G G G  F    ++  G  + +A  TS  ++A    
Sbjct: 130 KAKMSTSLFCVAVTPFIGFYDGVFGPGVGSFFMLACVILLGQHLIQAVCTSKLLNAACNL 189

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            AL V   S            G +     L +   + L   L  + +   G + + +   
Sbjct: 190 GALSVFSLS------------GAIIWSLALAMALAAFLGAQLGARCAVRFGTRLIRLLLV 237

Query: 269 MIMFTTSFV 277
            +    +  
Sbjct: 238 SVCILMALK 246


>gi|319956311|ref|YP_004167574.1| hypothetical protein Nitsa_0556 [Nitratifractor salsuginis DSM
           16511]
 gi|319418715|gb|ADV45825.1| protein of unknown function DUF81 [Nitratifractor salsuginis DSM
           16511]
          Length = 252

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 82/200 (41%), Gaps = 10/200 (5%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
              ++ Y    ++   LS   + + GVG  +V+VP     F +MG+     +++A    L
Sbjct: 2   SPELLHYGIYFLLTLGLSTLFA-MGGVGSAIVLVPT----FNMMGMP----LNLAKAIGL 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            + + +++ + + +   G ++++     +  + + T + +     V    +      F +
Sbjct: 53  FINSSSTITASVMNFFRGVLDIRFALPLVIAILLATPIGAYASKFVPVVTVKWILVAFLI 112

Query: 136 LMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
               L+L   R   +  +   ++ ++ G   G +SG +GVGGG     L++  G    KA
Sbjct: 113 TAAFLLLYTKR-ETKVVYDKAWILFLIGFSVGIISGMIGVGGGALIMPLLILLGFDAKKA 171

Query: 196 TATSAGVSALIAFPALLVRI 215
               + +    +  A    +
Sbjct: 172 AYAVSFIIPFSSLGAFFTYL 191


>gi|300021945|ref|YP_003754556.1| hypothetical protein Hden_0413 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299523766|gb|ADJ22235.1| protein of unknown function DUF81 [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 307

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 84/231 (36%), Gaps = 45/231 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V     G +SGLFGVGGG +M P+L+      G+  +    VA+ T    +  +S
Sbjct: 14  VAVFLVLGVAVGFISGLFGVGGGFLMTPLLTFL----GVPPA----VAVATCNAHVVASS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL-----NKAFAIFCLLM 137
           V   + H R   +++K+    +      T V   ++  + K+ L     +  +  F  ++
Sbjct: 66  VSGAVVHYRRNNVDVKMALVMLVAGFAGTAVGVEVVRLLRKAGLFELTVSLTYVTFLGVV 125

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G L L                                + R    + +       + G   
Sbjct: 126 GTLTLIEGINSWRQVQTTGVASPRKSGQHSWVDRLPFKMRFQRSKLYISVVPPIVIGAFI 185

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIY 216
           GF+S  +G+GGG      M++           TS      +A  A L+  +
Sbjct: 186 GFISAIMGIGGGFIYIPAMIYILRMPTSVVVGTSLFQIVFVAAFATLLHAW 236



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 41/103 (39%), Gaps = 8/103 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IV     G +S + G+GGG + +P +    +       +   V +GTSL  I   +  + 
Sbjct: 179 IVIGAFIGFISAIMGIGGGFIYIPAMIYILR-------MPTSVVVGTSLFQIVFVAAFAT 231

Query: 87  MEH-RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           + H  ++ T+++ +    +    +     ++    +    +  
Sbjct: 232 LLHAWQNQTVDIVLAAILLVGGVVGAQFGTVASEKLRGDQMRI 274


>gi|212635964|ref|YP_002312489.1| hypothetical protein swp_3194 [Shewanella piezotolerans WP3]
 gi|212557448|gb|ACJ29902.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 257

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 78/209 (37%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           ++ +   + I L+   + L+G +  + G GGGL+ +P L  A         +    A+ T
Sbjct: 1   MAFEITYELIALLFAVAVLAGFIDAIAG-GGGLLTIPALMWA--------GLPPTAALAT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  + +   R G + +  +K  I    + + + ++ +  VD +FL       
Sbjct: 52  NKLQACGGSFFASLYFIRKGMVKLGEMKLAIGCAFLGSALGTIAVQMVDTAFLETLLPFL 111

Query: 134 CLLMGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
            L +G   L   ++  E   R        +      G   G  G G G  F    +   G
Sbjct: 112 ILAIGGYFLFSKKISEEDRHRVMTPTLFGFTAAFGVGLYDGFFGPGTGSFFALAFVSLAG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             + KATA +  ++      +L+     G
Sbjct: 172 FGLAKATAHAKVLNFSTNIASLIFFAIGG 200


>gi|220904919|ref|YP_002480231.1| hypothetical protein Ddes_1654 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869218|gb|ACL49553.1| protein of unknown function DUF81 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 416

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 52/122 (42%), Gaps = 8/122 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +   +  +++   GVGGG ++VP ++          S+ M++A GTS   +  + +
Sbjct: 293 LLPFIGGVVIASIAAFLGVGGGFLLVPFITSV-------TSLPMYLAAGTSALAVLVSMI 345

Query: 84  MSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                   HG  ++  ++   +  + + +++         + +L + F +  L +G   +
Sbjct: 346 TGITTLMLHGVMVDWNLVSIELVGVAVGSIIGPFTSRFFSEIWLKRLFIVLALYVGTDYV 405

Query: 143 KR 144
            R
Sbjct: 406 LR 407



 Score = 42.0 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 42/122 (34%), Gaps = 12/122 (9%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLV 213
           +  + +I G+V   ++  LGVGGG      +       +Y A  TSA    +     +  
Sbjct: 291 NPLLPFIGGVVIASIAAFLGVGGGFLLVPFITSVTSLPMYLAAGTSALAVLVSMITGITT 350

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            +  G     +  W+L  + +  V +   I    +           + +L   F ++   
Sbjct: 351 LMLHGV----MVDWNLVSIELVGVAVGSIIGPFTSRF-------FSEIWLKRLFIVLALY 399

Query: 274 TS 275
             
Sbjct: 400 VG 401


>gi|163839405|ref|YP_001623810.1| permease [Renibacterium salmoninarum ATCC 33209]
 gi|162952881|gb|ABY22396.1| predicted permease [Renibacterium salmoninarum ATCC 33209]
          Length = 267

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 98/263 (37%), Gaps = 26/263 (9%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M+   +D     I LI+VA F +G +  + G GGGL+ +PV+            I    A
Sbjct: 1   MLSGFEDISFFTILLIVVAGFAAGWIDAVVG-GGGLIQLPVMLMI-------PGITPIQA 52

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           + T+       +  S + + R    ++K       V    +   +L+ +++ +S      
Sbjct: 53  LETNKMGSIFGTATSSVTYYRRVKPDLKTALPMAVVALAGSFAGALLAANLPQSVFKPII 112

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDN-----YVKYIWGMVTGFLSGALGVG-GGIFTNLL 184
               + + I    +  +               +  + G V GF  G +G G G      L
Sbjct: 113 VAALIAVAIFTAVKPNIGELTALRHRGHRHYVLACLIGAVIGFYDGVIGPGTGSFLIIAL 172

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +   G +  +A+A +  V+      ALL           LP  SL     G  L++   +
Sbjct: 173 VTEMGYAFLEASAKAKIVNLATNPGALLFF---------LPHGSL---LWGVGLVLGGSN 220

Query: 245 ILITPLATKLSYMIGKKYLTIGF 267
           +    L  +++   G K++ I F
Sbjct: 221 MAGGYLGARMAVAKGSKFIRIVF 243


>gi|308272465|emb|CBX29069.1| hypothetical protein N47_J00500 [uncultured Desulfobacterium sp.]
          Length = 320

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 80/261 (30%), Gaps = 60/261 (22%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           +FGVGGG +M P+L     +MGI  +    VA  +    I   S      H R G ++ K
Sbjct: 41  IFGVGGGFLMTPLLI----MMGIPPT----VAAASDSNQIVAASASGTYAHYRLGNVDFK 92

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFCLLMGILML----------- 142
           +    +    +       ++  +  +      +   +     ++G  M            
Sbjct: 93  MGLVLLIGGVVGGTFGVQLVKILRATGNADFVIKITYVAMLAIIGGYMFAESIQNMKKAP 152

Query: 143 ------------------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG 178
                                    +             V  I G + G L+  +GVGGG
Sbjct: 153 ATEETSSSIAKPPSLYARMMNILPFKVHFDKSGINISLIVPLILGTLVGVLAAIMGVGGG 212

Query: 179 IFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
                +M++     ++    TS            +        +      S+ F+     
Sbjct: 213 FIMVPIMVYLLRMPMHVVVGTSLFQIFFTCVNVTI--------MQSHINHSVDFI---LA 261

Query: 238 LIILPISILITPLATKLSYMI 258
           L++L  S     + T++S  +
Sbjct: 262 LVLLVGSSAGAQIGTRISKRL 282



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 8/125 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV-MS 85
           ++   L G L+ + GVGGG +MVP++    +       + MHV +GTSL  I  T V ++
Sbjct: 194 LILGTLVGVLAAIMGVGGGFIMVPIMVYLLR-------MPMHVVVGTSLFQIFFTCVNVT 246

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            M+   + +++  +    +        + + +   +    +    AI  L++ + ML   
Sbjct: 247 IMQSHINHSVDFILALVLLVGSSAGAQIGTRISKRLKGEQIKILLAIIILIVMVQMLFGL 306

Query: 146 RLYCE 150
            +   
Sbjct: 307 IMTPH 311


>gi|229823091|ref|ZP_04449160.1| hypothetical protein GCWU000282_00386 [Catonella morbi ATCC 51271]
 gi|229787257|gb|EEP23371.1| hypothetical protein GCWU000282_00386 [Catonella morbi ATCC 51271]
          Length = 274

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 77/236 (32%), Gaps = 24/236 (10%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++ PVL        +     + ++  +++ V   + V +  + +    I  + +      
Sbjct: 42  IIKPVLDF------VGHDSVVAISFYSTVAVFTMSLVSTIRQVQAGRKIQWQQVAYLALG 95

Query: 107 LPITTVVTSLMISHV------DKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY 160
             +   + +     +                +   L+   M+                  
Sbjct: 96  SVLGGYLGNQTFEFLLKRVAQASQVTLIQIVVTVALLVFAMIYTRIENLHWSKQGALWYS 155

Query: 161 IWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATATSAGVSALIAFPALLVRIY-SG 218
             G+  GF +  LG+GGG     LLML +   I +AT  S           L+   + +G
Sbjct: 156 AVGLSLGFFASLLGIGGGPINVSLLMLVFAMPIKEATVYSIATIFCSQLTKLVTIAWGTG 215

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +    L            ++ I+P +I+   L  ++S ++  + +   F  ++   
Sbjct: 216 FARYDLS----------ILVYIVPAAIIGGLLGARMSRLLSDQAVRRVFQWVVLLV 261



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 41/117 (35%), Gaps = 10/117 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP--- 80
                     G  + L G+GGG + V +L   F       ++ +  A   S+  I     
Sbjct: 152 LWYSAVGLSLGFFASLLGIGGGPINVSLLMLVF-------AMPIKEATVYSIATIFCSQL 204

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           T +++          ++ IL   +    I  ++ + M   +    + + F    LL+
Sbjct: 205 TKLVTIAWGTGFARYDLSILVYIVPAAIIGGLLGARMSRLLSDQAVRRVFQWVVLLV 261


>gi|284929082|ref|YP_003421604.1| putative permease [cyanobacterium UCYN-A]
 gi|284809541|gb|ADB95246.1| predicted permease [cyanobacterium UCYN-A]
          Length = 262

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 50/107 (46%), Gaps = 8/107 (7%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++DYI ++ ++   SG L+G+ G+GGG ++V +L                 A+ TS   I
Sbjct: 1   MLDYILILSISGLFSGLLAGVLGIGGGAILVSLLLAF--------KNTPLQAVATSSMAI 52

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
              +    +++RR G +N++ +        +T      + +++ + +
Sbjct: 53  VIIASSGSLQNRRMGNLNLQKVFLLGIPAMVTAQFGVKIANYIPEYW 99



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 12/104 (11%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
            +  I G+ +G L+G LG+GGG     L+L +  +  +A ATS+    +IA         
Sbjct: 6   LILSISGLFSGLLAGVLGIGGGAILVSLLLAFKNTPLQAVATSSMAIVIIASSGS----- 60

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                  L    +G +N+  V ++   +++      K++  I +
Sbjct: 61  -------LQNRRMGNLNLQKVFLLGIPAMVTAQFGVKIANYIPE 97


>gi|237752591|ref|ZP_04583071.1| integral membrane protein [Helicobacter winghamensis ATCC BAA-430]
 gi|229376080|gb|EEO26171.1| integral membrane protein [Helicobacter winghamensis ATCC BAA-430]
          Length = 235

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 75/217 (34%), Gaps = 18/217 (8%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           + +A+G S+  +  +SV     + +   ++ +          I    +  +I +V    L
Sbjct: 24  IKIAIGISIMQMIFSSVYGSYVNYKRKLLDARDGIYVGIGGLIGAAFSGFVIDYVSSKTL 83

Query: 127 NKAFAIFCLLMGILML----KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
              F+IF +   + +                       + G   G  + +LG+GGG+   
Sbjct: 84  EVVFSIFIMYSFVKLFGASAYGGEKRIGEGIASKVFLVLCGCFVGVFAISLGIGGGMMLA 143

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            L+ +Y          S+     ++   ++    SG+    L     G+ +    +I+  
Sbjct: 144 PLLAYY-------LGYSSKQIIPLSLFFVIFSSVSGFTSLALH----GYASFKGGIIVGI 192

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            S++   +   L   I  K      + ++   + V A
Sbjct: 193 ASLIGVRIGIFLLSKIDAKKHK---ATLLIMYAIVLA 226



 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 11/125 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +++     G  +   G+GGG+++ P+L+     +G      + +    SL  +  +SV
Sbjct: 118 VFLVLCGCFVGVFAISLGIGGGMMLAPLLAY---YLGYSSKQIIPL----SLFFVIFSSV 170

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS----FLNKAFAIFCLLMGI 139
             F     HG  + K          I   +   ++S +D       L   +AI   +M  
Sbjct: 171 SGFTSLALHGYASFKGGIIVGIASLIGVRIGIFLLSKIDAKKHKATLLIMYAIVLAIMFN 230

Query: 140 LMLKR 144
            M   
Sbjct: 231 KMFFN 235


>gi|32476861|ref|NP_869855.1| hypothetical protein RB11226 [Rhodopirellula baltica SH 1]
 gi|32447409|emb|CAD78998.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 294

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 100/279 (35%), Gaps = 46/279 (16%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I+   + G   GL G GGG+  VP+L           SI    A+G SL  +  T++ 
Sbjct: 24  LAILFGCIVGFALGLTGGGGGVFAVPLLVY-------GMSIAPREAVGISLASVGGTALF 76

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +    HG + ++    +     +   V S + S V ++ L   FA+  L++   M  +
Sbjct: 77  GAVPRLIHGEVELRTGLLFAIAGMMGAPVGSYLSSLVPETALLLMFAVLMLVVAYRMWAK 136

Query: 145 DRLYCERK---------------------------FPDNYVKYIWGMVTGFLSGALGVGG 177
            +                                      +  + G++TG LSG  GVGG
Sbjct: 137 TKDPSIVSGVCNSEASMERDRSACQRDEDGTLRLTSRCARLLVLVGLMTGVLSGLFGVGG 196

Query: 178 GIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G      ++ + G  I++A  TS  V  L++   +   + SG             ++I  
Sbjct: 197 GFVIVPALVLFSGMEIHRAVGTSLFVIVLVSVSGVASHLLSGNE-----------LSIST 245

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            L+          L   ++  +    L   FS+ +   +
Sbjct: 246 ALLFTTGGFAGMWLGGIVAKRLEGPTLQKVFSIAVVLVA 284



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 8/122 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+++   ++G LSGLFGVGGG V+VP L            + +H A+GTSL VI   SV 
Sbjct: 177 LLVLVGLMTGVLSGLFGVGGGFVIVPALVLF-------SGMEIHRAVGTSLFVIVLVSVS 229

Query: 85  SFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
               H   G  +++     +         +  ++   ++   L K F+I  +L+   +L 
Sbjct: 230 GVASHLLSGNELSISTALLFTTGGFAGMWLGGIVAKRLEGPTLQKVFSIAVVLVATFVLV 289

Query: 144 RD 145
           + 
Sbjct: 290 KS 291



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 50/122 (40%), Gaps = 13/122 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIY 216
           +  ++G + GF  G  G GGG+F   L+++    +  +A   S       A    + R+ 
Sbjct: 24  LAILFGCIVGFALGLTGGGGGVFAVPLLVYGMSIAPREAVGISLASVGGTALFGAVPRLI 83

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            G             V +   L+     ++  P+ + LS ++ +  L + F+++M   ++
Sbjct: 84  HGE------------VELRTGLLFAIAGMMGAPVGSYLSSLVPETALLLMFAVLMLVVAY 131

Query: 277 VF 278
             
Sbjct: 132 RM 133


>gi|326794241|ref|YP_004312061.1| hypothetical protein Marme_0950 [Marinomonas mediterranea MMB-1]
 gi|326545005|gb|ADZ90225.1| protein of unknown function DUF81 [Marinomonas mediterranea MMB-1]
          Length = 259

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 90/214 (42%), Gaps = 15/214 (7%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M +++ D  +  I  ++ ++F +G +  + G GGGL++VP    +F L G+       VA
Sbjct: 1   MEWINIDLSLWVILALVASAFAAGFIDSVAG-GGGLILVP----SFILAGLPP----QVA 51

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL-NKA 129
           +G    V    ++ +     ++  +  K +   I    +   + + MI + D + +    
Sbjct: 52  LGQEKIVSTLGTIAAIRNFVKNKKVIWKAVMAGIPAGLVGAYIGAEMILYFDPNTVGKII 111

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYI----WGMVTGFLSGALGVGGGIFTNLLM 185
            A+  L + +  + +  ++   +   ++  YI       V GF  G  G G G F  L +
Sbjct: 112 LALMPLGIILSFIPKKHVHEGEQHFSSFKLYIGVPATVFVIGFYDGFFGPGTGSFLILAL 171

Query: 186 LF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
            F     +  A+A S   +      AL+  + +G
Sbjct: 172 HFILRFDLVAASANSKLFNFSSNIGALVAFVLAG 205


>gi|298248867|ref|ZP_06972672.1| protein of unknown function DUF81 [Ktedonobacter racemifer DSM
           44963]
 gi|297551526|gb|EFH85392.1| protein of unknown function DUF81 [Ktedonobacter racemifer DSM
           44963]
          Length = 287

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 71/241 (29%), Gaps = 41/241 (17%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                ++ +   I + +A+G SL  +   S  S     +    N+++         +  +
Sbjct: 32  IFIVPILTMFAHIDIRLAIGASLVSVIACSCGSAAPFLKGSLTNVRLAIVLETATTLGAL 91

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY------------------------ 148
               +   +   FL   F +  L+    ML R R                          
Sbjct: 92  TGVFLSGLLPAPFLFFIFGVVLLVSAKQMLTRRREPEITPLETASKQWVRRLDSSYPDRA 151

Query: 149 CERKFPDNYVKYIWGMVT----GFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVS 203
             R  P    +   G++     G LS  LG+G G+     M       I  +TATS  + 
Sbjct: 152 LGRDIPYRVQRLPMGLILMYGAGLLSALLGIGSGVLKIPAMDTALRLPIKVSTATSNFMI 211

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            + A  +       G  +                  I   S++   L  ++   I  + +
Sbjct: 212 GVTAAASAGAYFVRGDIVG------------PIAGPIALGSVVGAILGARILLAISNEKI 259

Query: 264 T 264
            
Sbjct: 260 R 260



 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 52/130 (40%), Gaps = 7/130 (5%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
                V  + + ++  + +G LS L G+G G++ +P +  A +L        + V+  TS
Sbjct: 155 DIPYRVQRLPMGLILMYGAGLLSALLGIGSGVLKIPAMDTALRL-------PIKVSTATS 207

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
             +I  T+  S   +   G I   I         +  ++ + ++  +    +   F +  
Sbjct: 208 NFMIGVTAAASAGAYFVRGDIVGPIAGPIALGSVVGAILGARILLAISNEKIRLLFVVVL 267

Query: 135 LLMGILMLKR 144
           + + + M+  
Sbjct: 268 VALAVQMILS 277


>gi|229493457|ref|ZP_04387242.1| YtnM protein [Rhodococcus erythropolis SK121]
 gi|229319418|gb|EEN85254.1| YtnM protein [Rhodococcus erythropolis SK121]
          Length = 315

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 88/260 (33%), Gaps = 25/260 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA-MGTSLGVIAPT 81
           + L  +    +  + G  G+  G+     L     L     S  +H+A +GT+L      
Sbjct: 4   LLLFTLVGVGAQLVDGALGMAFGVTAT-TLLMIGGLGPAQASAAVHLAEVGTTLA----- 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              S + H +   I+ K++        +   + + ++S +         A   L +GI +
Sbjct: 58  ---SGVSHWKFKNIDWKLVAKLGVPGAVGAFIGATVLSGLSTEAAVPITATILLAIGIYV 114

Query: 142 LKRDRLYC-----ERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYK 194
             R  +        R  P         G+  GF+  + G G G  T   +L  G  +   
Sbjct: 115 ALRFSVRPPAVADARTTPHTARFLSPLGLFGGFIDASGGGGWGPITTSTLLSRGKTAPRT 174

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
              + +    L+A  A L  +       GL   S G  N+  V  +    ++  P A  L
Sbjct: 175 VIGSVSASEFLVASAASLGFLV------GLGRESAG--NLLVVAGLALGGVIAAPFAAWL 226

Query: 255 SYMIGKKYLTIGFSMIMFTT 274
              +    L      ++  T
Sbjct: 227 VSRVPATLLGTAVGGVIVLT 246


>gi|193215172|ref|YP_001996371.1| hypothetical protein Ctha_1465 [Chloroherpeton thalassium ATCC
           35110]
 gi|193088649|gb|ACF13924.1| conserved hypothetical protein [Chloroherpeton thalassium ATCC
           35110]
          Length = 124

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 12/128 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS-LGVIAPT 81
           I  ++     +G  SGLFG+GGGLV+VP L            +  H A GTS + ++ P 
Sbjct: 5   IFYMLAIGISAGIFSGLFGIGGGLVIVPALIWV--------GLSQHEASGTSLVALLLPV 56

Query: 82  SVMSFMEHRRHGTINMKILKD---WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            ++  +E+ R G ++ + +K        L     + S +   +  S L K+FA+  +   
Sbjct: 57  GLLGVIEYYRAGALSTEHIKYGLLIALGLFFGAFLGSKISVSISDSLLRKSFALLLVFSA 116

Query: 139 ILMLKRDR 146
             M    +
Sbjct: 117 FKMWFAGK 124



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 8/125 (6%)

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
           P  +     G+  G  SG  G+GGG+     +++ G S ++A+ TS     L      ++
Sbjct: 3   PQIFYMLAIGISAGIFSGLFGIGGGLVIVPALIWVGLSQHEASGTSLVALLLPVGLLGVI 62

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
             Y           +L   +I   L+I         L +K+S  I    L   F++++  
Sbjct: 63  EYYR--------AGALSTEHIKYGLLIALGLFFGAFLGSKISVSISDSLLRKSFALLLVF 114

Query: 274 TSFVF 278
           ++F  
Sbjct: 115 SAFKM 119


>gi|329754344|gb|AEC03570.1| magnetosome protein MamO [alpha proteobacterium UT-1]
          Length = 583

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 61/211 (28%), Gaps = 44/211 (20%)

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + +   +    +K  I       V+   + + +  S +     +F L+M    + 
Sbjct: 377 AAALRNDKAQLVQWDKVKPLIPWGVAGVVIGYFIGNAIGDSVVGVLLGLFALIMAGKAVL 436

Query: 144 -----------------------------------RDRLYCERKFPDNYVKYIWGMVTGF 168
                                              R +              + G+  G 
Sbjct: 437 EILQPNAGEDTAEAIAAAEAGDEMDELMALAEGTTRPKTSGIALPEGPTRSAVLGLPMGL 496

Query: 169 LSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            SG LG+ GG+    L  + G  S+  A A S+ +    +    +V    G         
Sbjct: 497 FSGILGISGGVIEVPLQRYIGRISLQNAIANSSVLVFWASVAGSVVAFIHG--------G 548

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S G ++  A + +  + I    +   L   +
Sbjct: 549 STGLIHWEAPVTLALVMIPGAYVGGFLGARL 579



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 11/99 (11%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V     G  SG+ G+ GG++ VP+             I +  A+  S  ++   SV   
Sbjct: 488 AVLGLPMGLFSGILGISGGVIEVPLQRYI-------GRISLQNAIANSSVLVFWASVAGS 540

Query: 87  MEHRRHGT----INMKILKDWIFVLPITTVVTSLMISHV 121
           +    HG     I+ +       V+     V   + + +
Sbjct: 541 VVAFIHGGSTGLIHWEAPVTLALVMIPGAYVGGFLGARL 579


>gi|92109729|ref|YP_572015.1| hypothetical protein Nham_4622 [Nitrobacter hamburgensis X14]
 gi|91802811|gb|ABE65183.1| protein of unknown function DUF81 [Nitrobacter hamburgensis X14]
          Length = 267

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 67/183 (36%), Gaps = 15/183 (8%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP+L     +         HVA+GTS   ++ +++ +   H R G +  +    +  
Sbjct: 31  ILAVPLLVYVVGVK------SPHVAIGTSAIAVSMSALGNLFAHSRAGNVKWRCAFAFAA 84

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD--------RLYCERKFPDNY 157
              I  +  S     +D   L   F +  +++G +ML++          L  E       
Sbjct: 85  AGVIGALAGSQAAKALDGQKLLALFGVVMIVVGSMMLRKRQSGENDDVHLTAESAKELLP 144

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           +    G   G  SG  G+GGG      L+L  G  +  A  TS                +
Sbjct: 145 LLLGIGFAVGVFSGFFGIGGGFLIVPGLILATGMPLTSAIGTSLVAITAFGAATAASYAW 204

Query: 217 SGW 219
           SG+
Sbjct: 205 SGF 207


>gi|296284598|ref|ZP_06862596.1| membrane protein [Citromicrobium bathyomarinum JL354]
          Length = 304

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G L+ L GVGGG ++VP +     + G        V +GTSL  I   ++ S 
Sbjct: 179 LILGTGVGILTMLMGVGGGFMLVPAMLYILGMSG-------KVVVGTSLFNILFVTMAST 231

Query: 87  MEHRRH-GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H      +++ +    +    +     + +   +   +L  A A   LL+ + ML   
Sbjct: 232 MTHALTTKAVDLVLAALLLVGSVLGAQFGTRIALKLKPDWLRLALATIVLLVALRMLFGL 291

Query: 146 RLYCER 151
            +  + 
Sbjct: 292 SIQPDE 297



 Score = 56.2 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 53/292 (18%), Positives = 99/292 (33%), Gaps = 56/292 (19%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +I+    L+G LSGLFGVGGG +  P+L       GI  +    VA  ++   +   SV
Sbjct: 15  LVIVALGALTGILSGLFGVGGGFLTTPLLIF----YGIPPT----VAAASAATQVTGASV 66

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMG 138
              + H R G ++ ++    +       ++ + + S           +N  +      +G
Sbjct: 67  SGVLAHNRRGGVDYRMGGVLVVGGIFGALIGAALFSFFQSIGQIDVVINILYVFMLGSIG 126

Query: 139 ILMLKR-------------DRLYCERKFP------------------DNYVKYIWGMVTG 167
            LM++               R    R  P                        I G   G
Sbjct: 127 ALMMREALAALNIRQSKGLKRAAKRRHHPLVAALPYRWRFYRSGLYISPLAPLILGTGVG 186

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
            L+  +GVGGG      ML+  G S      TS      +   + +    +   ++ +  
Sbjct: 187 ILTMLMGVGGGFMLVPAMLYILGMSGKVVVGTSLFNILFVTMASTMTHALTTKAVDLV-- 244

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                       ++L  S+L     T+++  +   +L +  + I+   +   
Sbjct: 245 ---------LAALLLVGSVLGAQFGTRIALKLKPDWLRLALATIVLLVALRM 287


>gi|75763241|ref|ZP_00742998.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74489270|gb|EAO52729.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 252

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 107/265 (40%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  ++ + L+ + + L+G +  + G GGG++ +P++            +   VA+ T+  
Sbjct: 2   DLTIELLILLFLVAVLAGWIDTIAG-GGGMITIPIMLLV--------GMSPSVAIATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  ++M+ +   +   IN+K ++  I +    +V+   ++  +   +L        ++
Sbjct: 53  QGSSGTLMATVFFIKKKEINLKEMRLSILMTFFGSVLGGWLVLQIRAEYLIMILPFLLII 112

Query: 137 MGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           +G+  L    +  E   RK              GF  G  G G G    L  +L YG S 
Sbjct: 113 IGLYFLLSPNIANEDRPRKISMLLFALTVAPFLGFYDGFFGPGTGSLIALAFILLYGYSA 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +ATA +  ++    F ALL  I  G        W++G       LI++   I+ + +  
Sbjct: 173 TRATANAKILNFTSNFAALLYFIIFGQ-----IDWTIG-------LIMMLGQIIGSYIGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           K+    G   +     ++ F  +  
Sbjct: 221 KMVLTKGTSLIRPIVVIVCFVMAIK 245


>gi|266621194|ref|ZP_06114129.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
 gi|288867164|gb|EFC99462.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
          Length = 253

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 104/266 (39%), Gaps = 25/266 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +++ I + + A   +G  +G  G+    V+ P+L            +  + A+G +L   
Sbjct: 1   MLEKIIVCLFAGLGAGFGTGFAGMSAAAVISPMLITFL-------GVPAYQAIGIALASD 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              S +S   + +H  ++++     +  + + T+V S + S V    +  A     +L+G
Sbjct: 54  VLASAVSAYTYGKHKNLDIRNGLVMMAAVLLFTLVGSYISSLVPNHAMGNASVFLTMLLG 113

Query: 139 ILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
           I  + R  L  +       V+       + G+V GF+ G +G GGG+   LL+    G  
Sbjct: 114 IKFIVRPVLTTKDAQASKTVRQKLIQSIVSGIVVGFICGFIGAGGGMMMLLLLTSVLGYE 173

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           +  A  TS  +    A    L     G    G+P   L       +++ +  + L   +A
Sbjct: 174 LKTAVGTSVFIMTFTALTGSLSHFAIG----GMPDLFL-------LVLCILFTFLFARIA 222

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
              +     K L     +I+F    V
Sbjct: 223 AVFANKADPKLLNRLTGIILFLLGAV 248


>gi|84393223|ref|ZP_00991985.1| hypothetical protein V12B01_08487 [Vibrio splendidus 12B01]
 gi|84376129|gb|EAP93015.1| hypothetical protein V12B01_08487 [Vibrio splendidus 12B01]
          Length = 259

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 84/210 (40%), Gaps = 16/210 (7%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  +     R+G +++K ++  IF   I + + + ++ H+D S L   
Sbjct: 46  ALATNKLQSSFGSFSASWYFVRNGIVSIKEMRLAIFCTFIGSAIGAELVQHIDASLLTSM 105

Query: 130 FAIFCLLMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             +  + + +  L   +      ++K  +       G   GF  G  G G G IFT   +
Sbjct: 106 IPLLLIAISLYFLLAPQTRASEGKQKMSEAVFALCIGGGVGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                S+  ATA +  ++      AL+  I +G     LP W LG       L++     
Sbjct: 166 AIGHFSLVDATARTKVLNFTSNIAALIFFILAG-----LPIWELG-------LVMAVGGF 213

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +   L  K+    G+K++     ++    +
Sbjct: 214 MGAQLGAKVVVTKGQKWIRPLVIVMSMLMA 243


>gi|194334585|ref|YP_002016445.1| hypothetical protein Paes_1785 [Prosthecochloris aestuarii DSM 271]
 gi|194312403|gb|ACF46798.1| conserved hypothetical protein [Prosthecochloris aestuarii DSM 271]
          Length = 121

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 11/126 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L+I     +G LSG+FGVGGG+++VPVL  A            H A  TSL  +    
Sbjct: 3   FLLMIATGLAAGVLSGMFGVGGGVIIVPVLVLALGF-------TQHAANATSLVALLLPV 55

Query: 83  VMSFMEHR----RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            +  +       + GT N+         L    ++ + + + +    L K FA+F  ++ 
Sbjct: 56  GLLGVLEYFRAGKIGTDNIWFGLLIAAGLFFGALLGAKLANGLSGDVLRKMFAVFLGIVA 115

Query: 139 ILMLKR 144
           + M  +
Sbjct: 116 VRMWLQ 121



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 9/123 (7%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRI 215
            +    G+  G LSG  GVGGG+    +++   G + + A ATS     L      ++  
Sbjct: 4   LLMIATGLAAGVLSGMFGVGGGVIIVPVLVLALGFTQHAANATSLVALLLPVGLLGVLEY 63

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +            +G  NI   L+I         L  KL+  +    L   F++ +   +
Sbjct: 64  FR--------AGKIGTDNIWFGLLIAAGLFFGALLGAKLANGLSGDVLRKMFAVFLGIVA 115

Query: 276 FVF 278
              
Sbjct: 116 VRM 118


>gi|152996650|ref|YP_001341485.1| hypothetical protein Mmwyl1_2637 [Marinomonas sp. MWYL1]
 gi|150837574|gb|ABR71550.1| protein of unknown function DUF81 [Marinomonas sp. MWYL1]
          Length = 249

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 81/256 (31%), Gaps = 21/256 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I LI +A F++G   G F    G++ VP+         I       +A    L ++   
Sbjct: 5   FISLIAIAVFITGISKGGFSGAFGILAVPL---------ISLQTSPMLAAAIMLPILCIM 55

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            + +  +  +      + L   I       ++  L  S     +L     +  +   +  
Sbjct: 56  DIFTVQKFWKKWNT--EQLIKCIPAAITGVIIGGLTASWFSAEWLKIMVGVIAVGFTLNS 113

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
             +      +K    +   +W  + GF S     GG   +   +L       +  AT+A 
Sbjct: 114 WPKKSRTAPQKPLSTFAGKLWCALGGFTSFIAHAGGPPMSV-YLLRANLDKTQYVATAAV 172

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           +   I +  L+     G   +          NI   L   P++ L   L   L Y I   
Sbjct: 173 IFTAINYVKLIPYGMLGQLNSS---------NILLSLCFTPVAFLGVQLGAWLHYKISTT 223

Query: 262 YLTIGFSMIMFTTSFV 277
                    +F T   
Sbjct: 224 LFFKVMYSFLFLTGIK 239


>gi|126641755|ref|YP_001084739.1| hypothetical protein A1S_1710 [Acinetobacter baumannii ATCC 17978]
          Length = 233

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 8/121 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++     ++G L+G+ GVGGG V+VP L K         ++ MH  + TSL +I   S M
Sbjct: 113 VLASIGIIAGLLTGMLGVGGGFVIVPALRKV-------TNLDMHSIVATSLMIIFLISGM 165

Query: 85  SFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           S + H   G    + I   +        ++    I  +  + + + FA+    + I M+ 
Sbjct: 166 SIVMHIAEGFHYPVAITSAFALACAFGMLLGRRAIRFIPSAIVQRVFALMVFAVAIYMVI 225

Query: 144 R 144
           +
Sbjct: 226 K 226



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 75/232 (32%), Gaps = 26/232 (11%)

Query: 62  DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV 121
                +  A    L  +A ++++  +E      +  +       +      +  L+ + +
Sbjct: 3   SQGWSVAQAAPIGLLAVALSTLIGTIEGLFKKIVRYRAAIWIALIGAPMAHIGILIANTI 62

Query: 122 DKSFLNKAFAIFCLLMGILMLKRDRLYCERK--------------FPDNYVKYIWGMVTG 167
              +L   F++    +G  ++                        F    V    G++ G
Sbjct: 63  SPIWLMLMFSLVMFTVGYRLISNRVSDFHNPPCQVNPSTGRFIWNFKTGSVLASIGIIAG 122

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
            L+G LGVGGG      +       ++   ATS  +  LI+  ++++ I  G+       
Sbjct: 123 LLTGMLGVGGGFVIVPALRKVTNLDMHSIVATSLMIIFLISGMSIVMHIAEGFHYP---- 178

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                V I +   +         L  +    I    +   F++++F  +   
Sbjct: 179 -----VAITSAFALACA--FGMLLGRRAIRFIPSAIVQRVFALMVFAVAIYM 223


>gi|257463536|ref|ZP_05627929.1| transporter [Fusobacterium sp. D12]
          Length = 263

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 49/266 (18%), Positives = 101/266 (37%), Gaps = 27/266 (10%)

Query: 8   FSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
            S M+    +   +   L+ +  FL+  +  + G GGG++ +P     F  +G+      
Sbjct: 1   MSSMLHWVGNMSPESFLLLSILCFLAAFIDSIAG-GGGMISLPA----FMAVGLPP---- 51

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           H+A+GT+    A  ++ S +   R   I + ++  +  +  I  +        +  ++  
Sbjct: 52  HIALGTNKVSAAIGTLASSLNFLRSNKIIIPLVTRFAPLALIGAIFGVKTALLIPPNYFQ 111

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI-----WGMVTGFLSGALGVGGGIFTN 182
                  + + I  L    L     +   +   I     +  V GF  G LG G G F  
Sbjct: 112 PISFFLLICVFIYSLMNKNLGESYSYSGIHSADIKWGCAFAFVIGFYDGFLGPGTGSFLI 171

Query: 183 LLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
            +++  +      ATAT+  ++      +  +  Y+G             +N+   LI+ 
Sbjct: 172 FMLIKIFHLDFAHATATTKFINLASNVISAALYFYAGK------------LNLPLGLIMA 219

Query: 242 PISILITPLATKLSYMIGKKYLTIGF 267
            I I+   + + L+   G K++   F
Sbjct: 220 VIMIVGAFVGSSLAIYKGSKFIKPVF 245


>gi|291549522|emb|CBL25784.1| Predicted permeases [Ruminococcus torques L2-14]
          Length = 248

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 75/205 (36%), Gaps = 15/205 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    ++    FL+G +  + G GGGL+ +P    A         I +H A+ T+    +
Sbjct: 1   MGIYLIVCPLVFLAGFVDSIAG-GGGLISLPAYMFA--------GIPVHNAIATNKLSSS 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +V+S     ++  ++   +   +    I +V  + +   +    L     +   ++  
Sbjct: 52  TGTVVSTARLIKNKKVDWGFVPGTVIGALIGSVAGANLALIISDHILKMVLVVILPIVAF 111

Query: 140 LMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIY 193
            +L+   +  E            +  +  +V G   G  G G G F  L+        + 
Sbjct: 112 CVLRDKNMDVEVPVGMTKNKQYLIAIVCSLVIGCYDGFYGPGTGTFLLLVFTKLAKIPLE 171

Query: 194 KATATSAGVSALIAFPALLVRIYSG 218
           KAT     V+      AL+  I +G
Sbjct: 172 KATGNVKIVNLSSNISALITFILAG 196


>gi|149279666|ref|ZP_01885795.1| hypothetical protein PBAL39_08435 [Pedobacter sp. BAL39]
 gi|149229702|gb|EDM35092.1| hypothetical protein PBAL39_08435 [Pedobacter sp. BAL39]
          Length = 162

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G +SGL G+G G + V  +    +       I   V+  TS  ++  T+  S + + 
Sbjct: 50  FFAGIISGLLGIGSGALKVIAMDNIMR-------IPFKVSTTTSNFMMGVTAAASAIVYL 102

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I+  I       +     + S ++       L   FA+    + + M+  
Sbjct: 103 HRGQIDAGIAMPVAVGVLCGATLGSKLLVKTKTDKLKVIFAVVVTFLALQMIYN 156



 Score = 40.8 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 13/122 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIY 216
             ++     G +SG LG+G G    + M          +T TS  +  + A  + +V ++
Sbjct: 44  GGFVMMFFAGIISGLLGIGSGALKVIAMDNIMRIPFKVSTTTSNFMMGVTAAASAIVYLH 103

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            G    G        + +   + +L        L +KL        L + F++++   + 
Sbjct: 104 RGQIDAG--------IAMPVAVGVLCG----ATLGSKLLVKTKTDKLKVIFAVVVTFLAL 151

Query: 277 VF 278
             
Sbjct: 152 QM 153


>gi|222823429|ref|YP_002575003.1| conserved hypothetical integral membrane protein (DUF81 domain
           protein) [Campylobacter lari RM2100]
 gi|222538651|gb|ACM63752.1| conserved hypothetical integral membrane protein (DUF81 domain
           protein) [Campylobacter lari RM2100]
          Length = 250

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 105/264 (39%), Gaps = 27/264 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + Y  ++   +  +G +  + G GGGL+ +P L       GI      H+A+ T+     
Sbjct: 5   LTYYVILFFVAAFAGCVDAIVG-GGGLITIPALFAC----GIPP----HLALATNKLQST 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+ + + +R+H  I    L   I    I  V+ +  +  +D++ +     I   L+ +
Sbjct: 56  FGSLTAVLSYRKHMNIEKIALG--ILFTAIGAVIGTYAVLLIDQNAVKIIVLICLALVFL 113

Query: 140 LMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKA 195
             + +  L   + E K      +  +G++ GF  G LG G G F      +F G S+  A
Sbjct: 114 YTIFKPNLGNVHNEAKMSATSFQITFGLLLGFYDGFLGPGTGSFWIFACVIFLGFSMKNA 173

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++      AL V +YS         W +G       +++    +L   + +KL 
Sbjct: 174 SINTKILNFTSNVVALGVFLYS-----YEVLWKVG-------VLMGIGQVLGAFVGSKLV 221

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
                 ++   F  ++  T    A
Sbjct: 222 LKTQGTFIKKLFLTMVALTIAKVA 245


>gi|330879521|gb|EGH13670.1| hypothetical protein PSYMP_25094 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 252

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 96/270 (35%), Gaps = 39/270 (14%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T     + 
Sbjct: 2   AGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGGVLV 53

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGILML 142
           HR++  I+ K+            ++T   +S +        + + +A     LL  + +L
Sbjct: 54  HRKNDNIDWKVTGLLTLGSVPAVLLTLWFLSTLHTAPDALNAIIKQALGYVLLLTALAVL 113

Query: 143 KRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLMLFYG 189
            + +L                     +  I G++ G +     +G G      L +L+  
Sbjct: 114 FKKKLLAFAHGRGDGQSFFSGTSLTVLTVITGLILGTMVALTSIGAGALGTVALFILYPL 173

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
               +   T    +  +   A L               S+G +N   +  +L  S+    
Sbjct: 174 LPTRRLVGTEIAHAVPLTLVAGLGLA------------SMGNMNWELLGWLLMGSLPGIY 221

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           L + ++  +    L    ++++    F  A
Sbjct: 222 LGSHMAGRVSDDLLRPFLAIMLGMIGFKLA 251



 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 139 VLTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAVPLTL 192

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ +     G +N ++L   +        + S M   V    L    AI   ++G  +  
Sbjct: 193 VAGLGLASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDDLLRPFLAIMLGMIGFKLAF 252


>gi|126656022|ref|ZP_01727406.1| hypothetical protein CY0110_03029 [Cyanothece sp. CCY0110]
 gi|126622302|gb|EAZ93008.1| hypothetical protein CY0110_03029 [Cyanothece sp. CCY0110]
          Length = 260

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 39/246 (15%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L            +    A+  SLG++   S++  + H   G +N ++   +     
Sbjct: 30  VPILVYVM-------GLGAKTAIAMSLGIVGMVSLIGVIPHWLQGNVNGQVAAIFAPTAM 82

Query: 109 ITTVVTSLMIS--HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP------------ 154
           +   + + M     + ++     FAI  LL  ++M+++ R   + +              
Sbjct: 83  LGAYLGTQMAGFPFITETMQLICFAIVMLLASMIMIRQGRQTLKHRHLLKEKQRFLHKKQ 142

Query: 155 -DNYVKYIWGMVTGFLS-GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            + ++  + G+  G L+      GG      L+L  G  + +A  TS  +    +    L
Sbjct: 143 HNRFLILLEGLGVGILTGFVGVGGGFAIIPALVLLGGIPMKEAIGTSLIIITFNSVTGFL 202

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIIL--PISILITPLATKLSYMIGKKYLTIGFSMI 270
             +                VN+  +L++     + L T     L+  I  K L  GF   
Sbjct: 203 GYLSH--------------VNLDWMLMMSFTIAASLGTLTGAYLTRFIDAKNLQKGFGYF 248

Query: 271 MFTTSF 276
           +     
Sbjct: 249 VLAVGI 254



 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI++     G L+G  GVGGG  ++P L            I M  A+GTSL +I   SV 
Sbjct: 147 LILLEGLGVGILTGFVGVGGGFAIIPALVLL-------GGIPMKEAIGTSLIIITFNSVT 199

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            F+ +  H  ++  ++  +     + T+  + +   +D   L K F  F L +GI +L R
Sbjct: 200 GFLGYLSHVNLDWMLMMSFTIAASLGTLTGAYLTRFIDAKNLQKGFGYFVLAVGIFVLIR 259


>gi|320354125|ref|YP_004195464.1| hypothetical protein Despr_2025 [Desulfobulbus propionicus DSM
           2032]
 gi|320122627|gb|ADW18173.1| protein of unknown function DUF81 [Desulfobulbus propionicus DSM
           2032]
          Length = 129

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 8/118 (6%)

Query: 12  VFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
            F  ++  V+ +    +  FL   +S +FG GGG  MVP+++ A +L        M++ +
Sbjct: 4   EFWGQEFQVNMVV-GCIGGFLIAIMSSMFGFGGGPFMVPLMTVALRL-------PMYLVV 55

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           G+SL  I   + +S M H + G  ++           +   +   +   V    + + 
Sbjct: 56  GSSLLAIFFNTTVSTMRHYQFGNFDLYFFLAMFPAAILGGYIAPQIAKRVSPLVVKRI 113



 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 40/107 (37%), Gaps = 13/107 (12%)

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           I G +   +S   G GGG F   LM       +Y    +S            L+ I+   
Sbjct: 19  IGGFLIAIMSSMFGFGGGPFMVPLMTVALRLPMYLVVGSS------------LLAIFFNT 66

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
            ++ +  +  G  ++   L + P +IL   +A +++  +    +   
Sbjct: 67  TVSTMRHYQFGNFDLYFFLAMFPAAILGGYIAPQIAKRVSPLVVKRI 113


>gi|296131264|ref|YP_003638514.1| protein of unknown function DUF81 [Cellulomonas flavigena DSM
           20109]
 gi|296023079|gb|ADG76315.1| protein of unknown function DUF81 [Cellulomonas flavigena DSM
           20109]
          Length = 324

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 91/264 (34%), Gaps = 23/264 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L+ +    +  + G  G+  G+      +     +G + +     A  T      
Sbjct: 1   MPTIVLLALVGLAAQLVDGSLGMAYGVTS----TTLLLAIGTNPAA----ASATVHLAEI 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T++ S + H + G ++ K++        I     +  +S++         ++  L +GI
Sbjct: 53  GTTLASGVSHWKFGNVDWKVVLRIGVPGAIGAFAGATFLSNLSTDAAKPVMSLVLLGLGI 112

Query: 140 LMLKRDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIY 193
            +L R  L   R                G+V GF+    G G G      +L  G     
Sbjct: 113 YLLVRFTLKGLRTDRAHLPLRKRFLAPLGLVAGFVDATGGGGWGPVGTPALLASGRIEPR 172

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           K   +      L+A  A L  +++              +++  VL +L   ++  P+A  
Sbjct: 173 KVVGSIDTSEFLVAIAASLGFLFALGSQG---------IDVQWVLALLIGGLVAAPIAAW 223

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           L   +  + L      ++  T+  
Sbjct: 224 LVRKVPGRVLGSAVGGVIVLTNTR 247


>gi|294141721|ref|YP_003557699.1| hypothetical protein SVI_2950 [Shewanella violacea DSS12]
 gi|293328190|dbj|BAJ02921.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 259

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 76/209 (36%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  +   + I L+   + L+G +  + G GGGL+ +P L            +    A+ T
Sbjct: 1   MPLELSYELIALMFAVAMLAGFIDAIAG-GGGLITIPALMWV--------GLPPTAALAT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  + +   R G + +  +K  I    +   + ++ +  +D +FL       
Sbjct: 52  NKLQACGGSFFASLYFVRKGMVKLGEMKLAIACAFVGAALGTIAVQMIDTAFLETLLPFL 111

Query: 134 CLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
            L +G   L   ++  E +   F      +      G   G  G G G  F    +   G
Sbjct: 112 ILAIGGYFLFSKKISEEDRHQVFTPVMFGFTAAFGVGLYDGFFGPGTGSFFALAFVSLAG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             + KATA +  ++      +L+     G
Sbjct: 172 FGLAKATAHAKVLNFSTNIASLIFFAIGG 200


>gi|290979999|ref|XP_002672720.1| hypothetical protein NAEGRDRAFT_81115 [Naegleria gruberi]
 gi|284086299|gb|EFC39976.1| hypothetical protein NAEGRDRAFT_81115 [Naegleria gruberi]
          Length = 610

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 11/140 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + L  V S LSG ++G+ GVGGG++  P+L       G+D      VA  T+  ++ 
Sbjct: 469 VGTVILYPVFSALSGVIAGMLGVGGGMIKSPMLLYL----GLDPL----VAAATASFMML 520

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--DKSFLNKAFAI-FCLL 136
            TS +S ++    GT+       +        +V  +++  V          F + F ++
Sbjct: 521 FTSSISSIQFVILGTVPFDYGLWYFVFGLFAGMVGQILMHFVFQKGRKSVLVFIVAFIII 580

Query: 137 MGILMLKRDRLYCERKFPDN 156
           +  L +    +Y       N
Sbjct: 581 VSTLCMTGFGIYNAVIMLQN 600



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 32/58 (55%)

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           ++  ++G ++G LGVGGG+  + ++L+ G     A AT++ +    +  + +  +  G
Sbjct: 477 VFSALSGVIAGMLGVGGGMIKSPMLLYLGLDPLVAAATASFMMLFTSSISSIQFVILG 534



 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 18/70 (25%), Gaps = 1/70 (1%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRI 215
            +  +   +   LS   G+GGG     LM          A   S  +    +    +   
Sbjct: 166 AIATVISFLGSVLSTMAGIGGGGLIVPLMETAGQFPPQMAVGISKTMIFGASISNFIALS 225

Query: 216 YSGWGLNGLP 225
                    P
Sbjct: 226 LKRHPHADRP 235



 Score = 36.6 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 14/128 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  V SFL   LS + G+GGG ++VP       LM         +A+G S  +I   S+
Sbjct: 166 AIATVISFLGSVLSTMAGIGGGGLIVP-------LMETAGQFPPQMAVGISKTMIFGASI 218

Query: 84  MSFME-------HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +F+        H     IN  +         +  +V  L+ S      +    AI   +
Sbjct: 219 SNFIALSLKRHPHADRPLINYDVALLLQPTSLVGVLVGVLLNSMTPNWLIVLLSAIILTI 278

Query: 137 MGILMLKR 144
           + +    R
Sbjct: 279 VSLTTFVR 286


>gi|229553275|ref|ZP_04442000.1| protein of hypothetical function DUF81 [Lactobacillus rhamnosus
           LMS2-1]
 gi|258540113|ref|YP_003174612.1| permease [Lactobacillus rhamnosus Lc 705]
 gi|229313361|gb|EEN79334.1| protein of hypothetical function DUF81 [Lactobacillus rhamnosus
           LMS2-1]
 gi|257151789|emb|CAR90761.1| Conserved permease [Lactobacillus rhamnosus Lc 705]
          Length = 245

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 61/151 (40%), Gaps = 1/151 (0%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
            A  TSL    P   +    H R G +        +      TVV SL   ++ +   + 
Sbjct: 41  TAAATSLFTAIPALAVGCYSHYRTGNMRFHAGNRILLTAVPATVVGSLAAPYIPELVYSW 100

Query: 129 AFAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
           + AI  +++G+ ML++      ++     +  Y+ GM++G + G  G+ GG      ++ 
Sbjct: 101 SIAIIFMVLGVQMLRQSFGRKAKKTTQPAWFAYVLGMISGLMVGVAGLSGGGPIMAGLML 160

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSG 218
            G  +  A ATS+     ++     +    G
Sbjct: 161 MGLDMPHAAATSSYALVALSIIGCFLHATQG 191


>gi|119896724|ref|YP_931937.1| hypothetical protein azo0433 [Azoarcus sp. BH72]
 gi|119669137|emb|CAL93050.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
          Length = 259

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 91/270 (33%), Gaps = 37/270 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             VA F  G + GL GVGGG +M P+L   F        I   VA+GT L   A T    
Sbjct: 5   YTVAGFAVGAIVGLTGVGGGSLMTPLLVLLF-------GIHPSVAVGTDLLYAAITKAGG 57

Query: 86  FMEHRRHGTINMKILKDWIFV-LPITTVVTSLMISHVDK------SFLNKAFAIFCLLMG 138
            + H   GT++  + +      +P   +   L+ +            +  A  +  LL  
Sbjct: 58  TVAHGLKGTVDWTVTRRLASGSIPAAALTLVLVGTFAPGGMAGATGLIKVALGVALLLTA 117

Query: 139 ILMLKRDRLYC---------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN--LLMLF 187
           + ++ R ++                  ++  + G V G L     VG G      L  L+
Sbjct: 118 VALIFRKQIQAYAASRFGDEPNPQRTAWLTVVVGAVLGVLVSISSVGAGALGVTALFFLY 177

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                 +   +    +  +   A +              W LG V+   +  ++  S+  
Sbjct: 178 PKMPALRIVGSDIAHAVPLTLVAGIG------------HWILGSVDWFLLGSLIVGSLPG 225

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             L + +S  +  + L    + ++      
Sbjct: 226 IWLGSHISTKVPDRVLRPILATMLVLVGAK 255



 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 42/101 (41%), Gaps = 6/101 (5%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           VG G + V  L   +  M    ++ +   +G+ +    P ++++ + H   G+++  +L 
Sbjct: 163 VGAGALGVTALFFLYPKM---PALRI---VGSDIAHAVPLTLVAGIGHWILGSVDWFLLG 216

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             I        + S + + V    L    A   +L+G  ++
Sbjct: 217 SLIVGSLPGIWLGSHISTKVPDRVLRPILATMLVLVGAKLI 257


>gi|260459695|ref|ZP_05807949.1| protein of unknown function DUF81 [Mesorhizobium opportunistum
           WSM2075]
 gi|259034497|gb|EEW35754.1| protein of unknown function DUF81 [Mesorhizobium opportunistum
           WSM2075]
          Length = 261

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 90/266 (33%), Gaps = 25/266 (9%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            D  +  + ++  A+F +G +  + G GGGL+ +P L     L G         A+GT+ 
Sbjct: 2   IDLSIQTVAMLAFAAFAAGFVDSIAG-GGGLITIPALL----LAGFSPVE----ALGTNK 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 S  + + +   G ++++       +      V +L+ + V    L     +  +
Sbjct: 53  LQGMFGSGSATIHYASKGHVDLRRQLPSALLALAGGAVGALLATIVPGDLLRALLPLILI 112

Query: 136 LMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGAS 191
            + +    +  +       +              GF  G  G G G F     +   G  
Sbjct: 113 AIALYFALKPNMNDVDRAERLSPFLFGLTLVPAVGFYDGLFGPGAGSFYMLAFVALAGYG 172

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           + KATA +  ++        ++              ++G ++    L++     L   + 
Sbjct: 173 VLKATAHTKLLNFASNIGGFIIFA------------AVGVISWKIGLMMGVAQFLGARVG 220

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
             L+  IG + +     ++    +  
Sbjct: 221 ASLAMRIGARLIKPLLVIVCLALAVK 246


>gi|229542065|ref|ZP_04431125.1| protein of unknown function DUF81 [Bacillus coagulans 36D1]
 gi|229326485|gb|EEN92160.1| protein of unknown function DUF81 [Bacillus coagulans 36D1]
          Length = 260

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 71/203 (34%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + L++   F +  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SMLALLVGFGFCAAFIDSVVG-GGGLIALPALLF--------TGLSPSAAVATNKLAGTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S     R G +++  +     +    +++ +  +  +D   L     I    +GI 
Sbjct: 59  GSFTSTFVFYRSGKLDLSSIYKMFPLTFFGSMLGAYTVHLMDPDVLKPLMLIMLAAVGIY 118

Query: 141 MLKRDRL-----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + +        Y +       +      + GF  G LG G G F     L  G    KA
Sbjct: 119 TVTKKDWGKIMAYKKLSVRRLILFTALIFLIGFYDGFLGPGTGSFLMFAYLMIGFDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ I+ G
Sbjct: 179 AGNAKFLNFGSNISALLMFIFLG 201


>gi|296137469|ref|YP_003644711.1| protein of unknown function DUF81 [Thiomonas intermedia K12]
 gi|295797591|gb|ADG32381.1| protein of unknown function DUF81 [Thiomonas intermedia K12]
          Length = 249

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 76/198 (38%), Gaps = 9/198 (4%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++ +  L    + +  TL  + GVG  + +VP              + + +A    L V
Sbjct: 3   ALILHDALYFALTLVLSTLFAMGGVGAAVALVPTFGML--------GMALDLAKAIGLFV 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
            + +++ + + +   G ++++        + I T + + M   V +  +    A F ++ 
Sbjct: 55  NSVSTMSASVMNAARGVLDIRFALPLAVSMMIATPLGAWMSRDVPQHVIEWVLAGFMIVS 114

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             L+L   R   +  +   +V    G+  G++SG +GVGGG     +++  G    KA  
Sbjct: 115 AALLLFFKR-QPKAAYDRVWVLIALGVGVGWVSGLIGVGGGSPILAVLVLLGFDAKKAAY 173

Query: 198 TSAGVSALIAFPALLVRI 215
             +              +
Sbjct: 174 AVSFSIPFATLGGFFTYL 191


>gi|191638860|ref|YP_001988026.1| Predicted permease [Lactobacillus casei BL23]
 gi|190713162|emb|CAQ67168.1| Predicted permease [Lactobacillus casei BL23]
 gi|327382908|gb|AEA54384.1| Hypothetical membrane protein, conserved, DUF81 family
           [Lactobacillus casei LC2W]
 gi|327386092|gb|AEA57566.1| Hypothetical membrane protein, conserved, DUF81 family
           [Lactobacillus casei BD-II]
          Length = 245

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 62/151 (41%), Gaps = 1/151 (0%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
            A  TSL    P   +    H R G +      + +      T++ SL   H+ +   + 
Sbjct: 41  TAAATSLFTAIPALAVGCYSHYRTGNMRFHAGNEILMTAVPATIIGSLAAPHIPEVVYSW 100

Query: 129 AFAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
           A A+  +++G+ ML++      ++     +  Y+ G ++G + G  G+ GG      ++ 
Sbjct: 101 AIAVIFVVLGVQMLRQSFARKVKKATQPAWFAYVLGAISGLMVGVAGLSGGGPIMAGLML 160

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSG 218
            G  +  A ATS+     ++    L+    G
Sbjct: 161 MGLDMPHAAATSSYALVALSVIGCLLHATQG 191


>gi|299770278|ref|YP_003732304.1| permease [Acinetobacter sp. DR1]
 gi|298700366|gb|ADI90931.1| permease [Acinetobacter sp. DR1]
          Length = 263

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 8/121 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++     ++G L+G+ GVGGG V+VP L K         ++ MH  + TSL +I   S M
Sbjct: 143 VLASIGIIAGLLTGMLGVGGGFVIVPALRKV-------TNLDMHSIVATSLMIIFLISGM 195

Query: 85  SFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           S + H   G    + I   +     +  ++    I  +  + + K FA+    + I M+ 
Sbjct: 196 SILMHIAEGFHYPVGITSAFALACAVGMLLGRRAIRFIPSAIVQKVFALMVFAVAIYMVI 255

Query: 144 R 144
           +
Sbjct: 256 K 256



 Score = 46.2 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 81/247 (32%), Gaps = 33/247 (13%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP L              +  A    L  +A ++++  +E      +  +       +
Sbjct: 25  LAVPALMT-------SQGWSVAQAAPIGLLAVALSTLIGTIEGLFKKIVRYRAAIWIALI 77

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK-------------- 152
                 +  L+ + +   +L   F+     +G  ++                        
Sbjct: 78  GAPMAHIGILIANAISPVWLMLMFSSVMFTVGYRLISNRVSDFHNPPCQVNPSTGRFIWN 137

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
           F    V    G++ G L+G LGVGGG      +       ++   ATS  +  LI+  ++
Sbjct: 138 FKTGSVLASIGIIAGLLTGMLGVGGGFVIVPALRKVTNLDMHSIVATSLMIIFLISGMSI 197

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           L+ I  G+         +G  +  A+   + +      L  +    I    +   F++++
Sbjct: 198 LMHIAEGFHYP------VGITSAFALACAVGM-----LLGRRAIRFIPSAIVQKVFALMV 246

Query: 272 FTTSFVF 278
           F  +   
Sbjct: 247 FAVAIYM 253


>gi|91779422|ref|YP_554630.1| hypothetical protein Bxe_B0673 [Burkholderia xenovorans LB400]
 gi|91692082|gb|ABE35280.1| putative membrane protein [Burkholderia xenovorans LB400]
          Length = 267

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 80/242 (33%), Gaps = 33/242 (13%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
             +       +  A   +L  ++ ++ +  +E  R   +  +            T + + 
Sbjct: 28  PALVFGMGWPIQQATPVALVAVSSSAAVGALEAFRKRLVRYRAALFMAAAGIPATALGAR 87

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI--------------- 161
           +   + +  L   FA   L++ + +L++         P++ +                  
Sbjct: 88  LARALPQRLLLALFAGVMLIVAVRLLRQTLRAGAAPQPESALCVARLNPATGRLAWSWAT 147

Query: 162 ------WGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVR 214
                  G VTG ++G LGVGGG     +M       ++   ATS  V  L+    ++  
Sbjct: 148 GAALAATGAVTGLMTGLLGVGGGFIIVPMMRKLTNVPMHGVVATSLMVITLVGGGGVIAT 207

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           ++ G  L            +  VL     +          S+ +    + +GF+ I+   
Sbjct: 208 MHHGASLP-----------LEVVLWFSLATAAGMLGGRIASHRLPGHQVQLGFATILICV 256

Query: 275 SF 276
           + 
Sbjct: 257 AL 258



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 50/114 (43%), Gaps = 8/114 (7%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G ++GL GVGGG ++VP++ K         ++ MH  + TSL VI        +    
Sbjct: 157 VTGLMTGLLGVGGGFIIVPMMRKL-------TNVPMHGVVATSLMVITLVGGGGVIATMH 209

Query: 92  HGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           HG  + ++++  +        +   +    +    +   FA   + + + ++ +
Sbjct: 210 HGASLPLEVVLWFSLATAAGMLGGRIASHRLPGHQVQLGFATILICVALGLMAK 263


>gi|268679996|ref|YP_003304427.1| hypothetical protein Sdel_1372 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268618027|gb|ACZ12392.1| protein of unknown function DUF81 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 253

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 106/257 (41%), Gaps = 25/257 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y  + +V  F++G +  +   GGG++ +PVL        +   +  HVA+ T+       
Sbjct: 7   YYVIFVVTGFVAGFIDAIA-GGGGIITIPVL--------MASGMPPHVALATNKLQATFG 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S M+     R G I    +   +    +   + +  I  +D + L KA  +  + + I  
Sbjct: 58  SGMAAFNFIRKGFIKWSEVAKGVLYTFVGAALGTYAILLMDPNMLAKAIPVMLVAIFIYT 117

Query: 142 LKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
           L   ++    +      +   +I+G+  GF  G LG G G F  + M+   G ++ KATA
Sbjct: 118 LLSPKMGESDRHAYLGQHLFFFIFGLAIGFYDGFLGPGTGTFWTIAMVGLLGLNLKKATA 177

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  ++      +L V ++SG        +++GF       ++    ++     + +   
Sbjct: 178 QTKVMNFTSNIVSLAVFLWSG-----NVLFAIGF-------LMGFGQVIGAYFGSNMVIK 225

Query: 258 IGKKYLTIGFSMIMFTT 274
              K++ + F  ++  T
Sbjct: 226 KEVKFIRLFFLTMVALT 242


>gi|197106133|ref|YP_002131510.1| hypothetical protein PHZ_c2672 [Phenylobacterium zucineum HLK1]
 gi|196479553|gb|ACG79081.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 255

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 93/258 (36%), Gaps = 18/258 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L     F +  + G  G+  G++   VL       G+  +     A  +       T 
Sbjct: 5   FWLFAAVGFAAQLVDGALGMAYGVISTSVLL----SFGVTPAN----ASASVHAAKVFTG 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H  +G ++ K+L        +  V+ + +++ +    +     ++  LMG+++L
Sbjct: 57  SASGVSHIVYGNVDWKLLALLAGGGVVGGVLGAYVLTSIPGEVVKPFVVVWLGLMGLVIL 116

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS--- 199
            R       K          G+V GF     G G G      ++  GA   KA  T+   
Sbjct: 117 YRAWRQTRPKVFSWKSPLPLGLVGGFFDAIGGGGWGPVVTSSLMGAGADTRKAIGTTNTA 176

Query: 200 -AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
              V+A  +   L   +   W   GL         + ++  ++   ++  PLA  ++ ++
Sbjct: 177 EVFVAAATSAAFLASLVSGHWETEGLGAL------LWSLAGLIAGGVVAAPLAGWMTKVL 230

Query: 259 GKKYLTIGFSMIMFTTSF 276
             + LT     ++   + 
Sbjct: 231 PLRMLTWLVGGLVVALAI 248


>gi|261837673|gb|ACX97439.1| integral membrane protein [Helicobacter pylori 51]
          Length = 277

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 76/215 (35%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G +++K      F   +  V+ S ++  +D   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLKEGSFAAFGGLMGAVLGSFILKIIDDKILMAVFVVVVCYTFIKYAFS 119

Query: 145 DRLYCE-------------------RKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
           +    E                   R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 NNKKPEHFEEMHFDLHANNKTPEKKRPLPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|240948720|ref|ZP_04753092.1| hypothetical protein AM305_07533 [Actinobacillus minor NM305]
 gi|240296936|gb|EER47514.1| hypothetical protein AM305_07533 [Actinobacillus minor NM305]
          Length = 254

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 82/206 (39%), Gaps = 13/206 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +   D + ++   +  +G +  + G GGGL+ +P L            I   +A+GT+  
Sbjct: 2   ELAFDTLMILFAVAAFAGFIDAIAG-GGGLLTIPALL--------SAGIPPAMALGTNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                S  + +   R   ++   +K  +F+  I   + ++++  +D   L K      LL
Sbjct: 53  QACGGSFSASLYFIRKKAVDFHQIKFILFLTFIGATIGTILVQLIDVEALKKILPFLILL 112

Query: 137 MGILMLKRDRLYCERKFPDNYVK---YIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
           +GI  L    +    +     +     I  M  GF  G  G   G  FT   +L  G ++
Sbjct: 113 IGIYFLFSPNVGDGDRKQRVSLLVFALIAAMPIGFYDGLFGPATGSFFTLAFLLLLGFNL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSG 218
            K+ A +  ++    F +L+  I  G
Sbjct: 173 SKSVAHAKVLNFTSNFASLIFFILGG 198


>gi|167628584|ref|YP_001679083.1| permease, putative [Heliobacterium modesticaldum Ice1]
 gi|167591324|gb|ABZ83072.1| permease, putative [Heliobacterium modesticaldum Ice1]
          Length = 107

 Score = 56.2 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 35/81 (43%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            +  H A GTSL VI PTSV S   +   G ++  +    +        + + +++ +  
Sbjct: 27  GVAQHQAHGTSLAVILPTSVASAFVYWWKGHLSWSLFWPIVLTGVAGAYLGARLMNRLSP 86

Query: 124 SFLNKAFAIFCLLMGILMLKR 144
             L +   I  +  G+ +L R
Sbjct: 87  ERLRQLLGIVMIAAGVRLLWR 107



 Score = 42.4 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 29/96 (30%), Gaps = 12/96 (12%)

Query: 182 NLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
             ++   G + ++A  TS  V    +  +  V  +             G ++      I+
Sbjct: 20  PTMVFLLGVAQHQAHGTSLAVILPTSVASAFVYWWK------------GHLSWSLFWPIV 67

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              +    L  +L   +  + L     ++M      
Sbjct: 68  LTGVAGAYLGARLMNRLSPERLRQLLGIVMIAAGVR 103


>gi|93006946|ref|YP_581383.1| hypothetical protein Pcryo_2122 [Psychrobacter cryohalolentis K5]
 gi|92394624|gb|ABE75899.1| protein of unknown function DUF81 [Psychrobacter cryohalolentis K5]
          Length = 251

 Score = 56.2 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 83/209 (39%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +     ++ I ++   + L+G +  + G GGGL+ +P +  A        +I   + +GT
Sbjct: 1   MDVSLSIEVILMLTAVAALAGFIDAIAG-GGGLLTIPAMLLA--------NIPPVLTLGT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +    A  ++ + +   R G +  K +K  I    I ++  S+ +       L K     
Sbjct: 52  NKLQAASGALAASITMIRKGVVKPKNIKTAIIAAFIGSIFGSIAVQLSPPDLLEKLIPFL 111

Query: 134 CLLMGILMLKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYG 189
              +GI  L   +L      P       + I   + GF  G +G G G+F  L  +   G
Sbjct: 112 IAAIGIYTLFAPKLGEVEAAPRISEGAWQKIAAPLIGFYDGYMGPGTGMFFALGNVALRG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             I +AT  +  ++      +L+  I  G
Sbjct: 172 RKIIEATGAAKVLNLSTNIGSLIFFILGG 200


>gi|153952207|ref|YP_001398770.1| hypothetical protein JJD26997_1817 [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939653|gb|ABS44394.1| putative membrane protein [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 254

 Score = 56.2 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 91/263 (34%), Gaps = 28/263 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y  ++   +  +G +  + G GGGL+ +P L            I  H+++ T+       
Sbjct: 10  YYFILFFVALFAGFIDSIVG-GGGLITLPALIAC--------GIPAHLSLATNKLQSVFG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + + + +  T  +  L   +F   +   + S  +  V    L     IF  L  +  
Sbjct: 61  SFTATLTYFKSTT--LPHLAWGVFFTALGAAIGSYSVLFVKDEQLKLIILIFLTLTFLYT 118

Query: 142 LKRDRLYCERKFPD----NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
                L      P          I G+  GF  G LG G G F     +   G ++ KA 
Sbjct: 119 ALCPNLGKHESEPKIKNIKIFHLICGLTLGFYDGFLGPGTGSFWIFACVMLLGFNMRKA- 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S     L     ++      W    L  W++G       L++    +L   L +KL  
Sbjct: 178 --SINTKILNFTSNIIALAIFLWQYELL--WAVG-------LLMGVGQVLGAYLGSKLVL 226

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
               K++   F +++  T    A
Sbjct: 227 KTNGKFIKTLFLIVVGATIIKVA 249


>gi|329754332|gb|AEC03564.1| magnetosome protein MamO [alpha proteobacterium LEMS]
          Length = 586

 Score = 56.2 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 62/211 (29%), Gaps = 44/211 (20%)

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + +   +    +K  I       V+   + + +  S +     +F L+M    + 
Sbjct: 376 AAALRNDKAQLVQWDKVKPLIPWGVAGVVIGYFIGNAIGDSVVGVLLGLFALIMAGKAVL 435

Query: 144 -----------------------------------RDRLYCERKFPDNYVKYIWGMVTGF 168
                                              R +         +    + G+  G 
Sbjct: 436 EILQPNAGEDTAEAIAAAEAGDEMDELMALAEGTTRPKTSGIALPEGSIRSAVLGLPMGL 495

Query: 169 LSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            SG LG+ GG+    L  + G  S+  A A S+ +    +    +V    G         
Sbjct: 496 FSGILGISGGVIEVPLQRYIGRISLQNAIANSSVLVFWASVAGSVVAFIHG--------G 547

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S G ++  A + +  + I    +   L   +
Sbjct: 548 STGLIHWEAPVTLALVMIPGAYVGGILGARL 578



 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 11/99 (11%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V     G  SG+ G+ GG++ VP+             I +  A+  S  ++   SV   
Sbjct: 487 AVLGLPMGLFSGILGISGGVIEVPLQRYI-------GRISLQNAIANSSVLVFWASVAGS 539

Query: 87  MEHRRHGT----INMKILKDWIFVLPITTVVTSLMISHV 121
           +    HG     I+ +       V+     V  ++ + +
Sbjct: 540 VVAFIHGGSTGLIHWEAPVTLALVMIPGAYVGGILGARL 578


>gi|282854643|ref|ZP_06263978.1| putative membrane protein [Propionibacterium acnes J139]
 gi|282582225|gb|EFB87607.1| putative membrane protein [Propionibacterium acnes J139]
          Length = 255

 Score = 56.2 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 101/257 (39%), Gaps = 22/257 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++A+F++G ++ + G GGGL+M+P L     L+G+     +   +GT+       ++ +
Sbjct: 9   LVLAAFMAGWVNAVVG-GGGLIMLPSL-----LVGLPTETPVATIVGTNKVAQVVGNLTA 62

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + + R    + ++      +  +  V+ + +++++ ++       +  + +GI   +R 
Sbjct: 63  GVGYLRKQRPDWRMFLWTAVLAGLGAVLGARIVTYMSRAVYTPILLVVLVTIGIYTWRRP 122

Query: 146 RLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAG 201
            L             +  I G+  G   GA+G G G F  L  +   G S  KA+  +  
Sbjct: 123 SLGAGHNGEGGKHPILVPIIGLFLGCYDGAIGPGVGTFWVLTYVAVGGYSFLKASGMAKI 182

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
            +A+     +                  G V       ++  ++L   +  + +   G  
Sbjct: 183 CNAVTNLVTITTLAIH------------GHVWWHIAWPLVISNVLGGLIGARTAMKHGNG 230

Query: 262 YLTIGFSMIMFTTSFVF 278
           ++   F ++    +   
Sbjct: 231 FVRTMFLIVTSVLAVRM 247


>gi|301102374|ref|XP_002900274.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262102015|gb|EEY60067.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 340

 Score = 56.2 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 14/121 (11%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT-ATSAGVSALIAFPALLVRIYSG 218
              G V G +S   GVGGGI     M  + +   +A   TS G  A+ +       + SG
Sbjct: 44  VATGGVAGMVSALTGVGGGIILIPAMAKFTSLSQQAINGTSLGAVAIASSVGAWNYLQSG 103

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS-MIMFTTSFV 277
                         N+   L     +IL T    + ++ +  K L++     ++  +  +
Sbjct: 104 LC------------NVPLALTTTIPAILATKYGVRTAHRLTSKKLSLVVGSAMLLCSPLI 151

Query: 278 F 278
           F
Sbjct: 152 F 152



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 50/125 (40%), Gaps = 7/125 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +    ++G +S L GVGGG++++P ++K         S+      GTSLG +A  S +  
Sbjct: 44  VATGGVAGMVSALTGVGGGIILIPAMAKF-------TSLSQQAINGTSLGAVAIASSVGA 96

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             + + G  N+ +         + T         +    L+       LL   L+  ++ 
Sbjct: 97  WNYLQSGLCNVPLALTTTIPAILATKYGVRTAHRLTSKKLSLVVGSAMLLCSPLIFLKNS 156

Query: 147 LYCER 151
            Y  +
Sbjct: 157 PYMPK 161



 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 1/89 (1%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
             +     +     +GTSL  + PT+  S + + R  +I++         + +   VTS 
Sbjct: 250 SYLTAASDMPQPTIIGTSLLSVVPTAASSTVFNLRAKSIHLPTAVRVGGSVAVGVFVTSK 309

Query: 117 MISH-VDKSFLNKAFAIFCLLMGILMLKR 144
            I+H V +  L            ++ ++R
Sbjct: 310 YITHDVPEDVLRGVLGTTLGAAALVTMRR 338


>gi|307294190|ref|ZP_07574034.1| protein of unknown function DUF81 [Sphingobium chlorophenolicum
           L-1]
 gi|306880341|gb|EFN11558.1| protein of unknown function DUF81 [Sphingobium chlorophenolicum
           L-1]
          Length = 304

 Score = 56.2 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 57/293 (19%), Positives = 101/293 (34%), Gaps = 56/293 (19%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +II    + G LSG+FGVGGG +  P+L       GI  ++        +   +   SV
Sbjct: 15  LVIIALGGVVGLLSGMFGVGGGFLTTPLLIF----YGIPPTVAAAS----AASQVTGASV 66

Query: 84  MSFMEHRRHGTINMK------------------ILKDWIFVLPITTVVTSLMISHVDKSF 125
              + H   GT++ +                  I +    +  I TV+  L +  +    
Sbjct: 67  SGVVTHMSRGTVDFRMGGVLIAGGVVGAGLGVLIFRLLQSIGQIDTVIGILYVLLLGGIG 126

Query: 126 LNKAFAIFCLLMGILMLKRDRLYCERKFP------------------DNYVKYIWGMVTG 167
              A      L+ +   ++ +    R  P                        + GM TG
Sbjct: 127 SLMAKESIQALIALKTGRKIQARKRRHHPLVAAMPMRWRFYRSGLYISPLAPLLLGMATG 186

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
            L+  LGVGGG      ML+  G +      TS      +     ++   +         
Sbjct: 187 ILTMLLGVGGGFILVPAMLYLLGMTTQSVVGTSLFQILFVTMATTMMHAMTTHA------ 240

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                V++   +++L  S+    + T++S  I  +YL I  + I+   +   A
Sbjct: 241 -----VDLVLAMLLLIGSVTGAQVGTRISMTIRPEYLRILLAAIVLLVAARMA 288



 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 8/126 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++    +G L+ L GVGGG ++VP +            +     +GTSL  I   ++ + 
Sbjct: 179 LLLGMATGILTMLLGVGGGFILVPAMLYLL-------GMTTQSVVGTSLFQILFVTMATT 231

Query: 87  MEH-RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           M H      +++ +    +        V + +   +   +L    A   LL+   M    
Sbjct: 232 MMHAMTTHAVDLVLAMLLLIGSVTGAQVGTRISMTIRPEYLRILLAAIVLLVAARMALGL 291

Query: 146 RLYCER 151
               + 
Sbjct: 292 GFRPDE 297


>gi|170079453|ref|YP_001736091.1| permease [Synechococcus sp. PCC 7002]
 gi|169887122|gb|ACB00836.1| predicted permease [Synechococcus sp. PCC 7002]
          Length = 282

 Score = 56.2 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 87/248 (35%), Gaps = 34/248 (13%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP+L      MG+D       A+  +L ++   S +  + H R G IN+K    +  
Sbjct: 25  VLAVPILVYV---MGVDP----KSAIAMTLFIVGIVSAVGLVPHWRQGNINLKKAGIFGS 77

Query: 106 VLPITTVVTSLM--ISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV----- 158
              +   + + +  +  +  +     FA+  L+  I M+++          + ++     
Sbjct: 78  ATMVGAFLGAQLTRLPFITGTVQLLLFAVMMLIAAIFMIRKSGKAIAHPANEPHLEDYPA 137

Query: 159 ---------KYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAF 208
                        G+  G L+G +GVGGG      ++  G   + +A  TS  +  + A 
Sbjct: 138 PVCRYCWLWLLTEGLGIGILTGLVGVGGGFAIVPALVLLGKTEMKEAVGTSLVIIVMNAI 197

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
              L         + +  W L    +     +  + IL   L          K L  GF 
Sbjct: 198 AGFLGYF---GQADVVFDWHL----MVNFTFVASLGIL---LGGYSGRYFNAKQLQKGFG 247

Query: 269 MIMFTTSF 276
             +   + 
Sbjct: 248 YFLLAVAA 255



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 9/130 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++      G L+GL GVGGG  +VP L              M  A+GTSL +I   ++
Sbjct: 145 LWLLTEGLGIGILTGLVGVGGGFAIVPALVLL-------GKTEMKEAVGTSLVIIVMNAI 197

Query: 84  MSFMEHRRHGTI--NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             F+ +     +  +  ++ ++ FV  +  ++      + +   L K F  F L +   +
Sbjct: 198 AGFLGYFGQADVVFDWHLMVNFTFVASLGILLGGYSGRYFNAKQLQKGFGYFLLAVAAFI 257

Query: 142 LKRDRLYCER 151
           L + R    R
Sbjct: 258 LFQQRDRLPR 267


>gi|53802477|ref|YP_112889.1| hypothetical protein MCA0357 [Methylococcus capsulatus str. Bath]
 gi|53756238|gb|AAU90529.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
          Length = 127

 Score = 56.2 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 8/100 (8%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWI 104
           LV+VP L               H+A GTS+ V+ P   + + +E+ RHG ++++      
Sbjct: 27  LVIVPALVYW-------AGYSQHMATGTSVAVLLPPIGIAAAVEYYRHGNVDVRAALILA 79

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + I +   +   + +   +L   F IF  ++GI ++  
Sbjct: 80  VTMLIGSWAGAYFANQIPGPYLRLMFGIFVWIVGIYLIYG 119


>gi|298290990|ref|YP_003692929.1| hypothetical protein Snov_0988 [Starkeya novella DSM 506]
 gi|296927501|gb|ADH88310.1| protein of unknown function DUF81 [Starkeya novella DSM 506]
          Length = 261

 Score = 56.2 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 90/251 (35%), Gaps = 25/251 (9%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT 94
              GL G GG ++ VP++     +         HVA+GTS   +A  + +    H R GT
Sbjct: 19  FTLGLVGGGGSILAVPLMVYLVGVGNP------HVAIGTSAFAVAINAAVGLFNHARTGT 72

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD----RLYCE 150
           +  +    +     +     S +   V    L   FA+  L +G+LML+          E
Sbjct: 73  VKWRCGGMYAAAGVVGAFAGSSLGKMVGGEKLLFLFALLMLAIGVLMLRGRGNPGEPGAE 132

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFP 209
                      +G+ TG  SG  G+GGG      ++   G  I  A  TS          
Sbjct: 133 CTREKAPKVLGFGLGTGAFSGFFGIGGGFLIVPGLIGSTGMPILNAVGTSLVAVTAFGLT 192

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK--YLTIGF 267
             +   +SG             VN     + +    L +    KL++ +  +   L+  F
Sbjct: 193 TAINYAFSGL------------VNWPLAFVFIIGGALGSVGGMKLAHHLAGRTGRLSTIF 240

Query: 268 SMIMFTTSFVF 278
           + ++F  +   
Sbjct: 241 AGLIFVVATYM 251



 Score = 40.4 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 39/102 (38%), Gaps = 9/102 (8%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            ++VP L            + +  A+GTSL  +    + + + +   G +N  +   +I 
Sbjct: 161 FLIVPGLIG-------STGMPILNAVGTSLVAVTAFGLTTAINYAFSGLVNWPLAFVFII 213

Query: 106 VLPITTVVTSLMISHVDKSF--LNKAFAIFCLLMGILMLKRD 145
              + +V    +  H+      L+  FA    ++   ML + 
Sbjct: 214 GGALGSVGGMKLAHHLAGRTGRLSTIFAGLIFVVATYMLFKS 255


>gi|307150949|ref|YP_003886333.1| hypothetical protein Cyan7822_1049 [Cyanothece sp. PCC 7822]
 gi|306981177|gb|ADN13058.1| protein of unknown function DUF81 [Cyanothece sp. PCC 7822]
          Length = 262

 Score = 56.2 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 50/218 (22%), Positives = 85/218 (38%), Gaps = 23/218 (10%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ TSL  I  TS+   +++ R G +++K +         T  + + + + V    L  +
Sbjct: 49  AVATSLLAIVITSISGSIQNWRMGYLDLKRVIYIAIPSLFTAQIGTYLANSVPDYILLAS 108

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKY--------IWGMVTGFLSGALGVGGGIFT 181
           FA   LL+  + L   R     K P +  K         I G   G L+G  GVGGG+  
Sbjct: 109 FA--LLLIATIFLTNLRKQLASKTPTDSSKTTNLMVSYVIIGGSGGLLAGFFGVGGGVVM 166

Query: 182 NLL-MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             L ML    +I  A  TS G+  + +  A                   G V     L++
Sbjct: 167 VPLQMLLIKENIKTAVQTSLGIIVITSIAACAGHALQ------------GNVQFLEGLLL 214

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               ++   ++T+    +  + +T  F  ++   SF F
Sbjct: 215 GIGGLIGAQISTRFLPRLSDQLVTFLFRTLLAILSFYF 252


>gi|116669969|ref|YP_830902.1| hypothetical protein Arth_1408 [Arthrobacter sp. FB24]
 gi|116610078|gb|ABK02802.1| protein of unknown function DUF81 [Arthrobacter sp. FB24]
          Length = 264

 Score = 56.2 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 73/202 (36%), Gaps = 14/202 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + LIIVA F +G +  + G GGGL+ +P L            I    A+ T+       +
Sbjct: 13  LILIIVAGFAAGWIDAVVG-GGGLIQLPALLLV-------PGISPVQALATNKMGSIFGT 64

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + + R    +++       +    +   +++ + +  S          + + +   
Sbjct: 65  TTSAVTYYRRVRPDLRTAIPMAVIALAGSFGGAVLAATLPASVFKPIIVAALVAVALFTA 124

Query: 143 KRDRLYCERKFPDN-----YVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +  +        +      V  + G   GF  G +G G G      L+   G +  +A+
Sbjct: 125 FKPNVGDLTSLRHDGRTHYVVACLIGAAIGFYDGLIGPGTGSFLIIALVSAMGYAFLEAS 184

Query: 197 ATSAGVSALIAFPALLVRIYSG 218
           A +  V+      AL+  +  G
Sbjct: 185 AKAKIVNMATNAGALIFFLPHG 206


>gi|323483786|ref|ZP_08089165.1| membrane family protein [Clostridium symbiosum WAL-14163]
 gi|323692758|ref|ZP_08106986.1| hypothetical protein HMPREF9475_01849 [Clostridium symbiosum
           WAL-14673]
 gi|323402871|gb|EGA95190.1| membrane family protein [Clostridium symbiosum WAL-14163]
 gi|323503200|gb|EGB19034.1| hypothetical protein HMPREF9475_01849 [Clostridium symbiosum
           WAL-14673]
          Length = 253

 Score = 56.2 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 87/209 (41%), Gaps = 16/209 (7%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  + +  ++    FL+G L  + G GGGL+ +P     F + G+      H+A+GT+  
Sbjct: 2   EITMTHYLIVCPLVFLAGLLDSIAG-GGGLISLPA----FMIAGVPP----HMALGTNKM 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                + M+     ++G I++K +  +I    + + + S +   +++  +         +
Sbjct: 53  CSTMGTSMATYRFAKNGYIHLKKVIWFIAAALVGSTIGSNLTLLMNEKIVEYMMIAVLPI 112

Query: 137 MGILMLKRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYG 189
           +   +L+  R+  + +           +     +V G   G  G G G F  L++     
Sbjct: 113 VAFYVLRNKRMGDDSQAGTIPAKKSFIIAAAAALVVGTYDGFYGPGTGTFLILILTGAAK 172

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
            ++ +A  T+  ++      A++  I +G
Sbjct: 173 YTMKEAAGTTKAINLSSNVAAIVTFIING 201


>gi|257458290|ref|ZP_05623439.1| transporter [Treponema vincentii ATCC 35580]
 gi|257444317|gb|EEV19411.1| transporter [Treponema vincentii ATCC 35580]
          Length = 260

 Score = 56.2 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 73/192 (38%), Gaps = 16/192 (8%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G +    G GGGL+ +P              +  H A+G +    A  + +S     ++
Sbjct: 18  AGFVDSAAG-GGGLISLPAYLFV--------GLPPHTAIGCNKFSAACGTTLSAARFFKN 68

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           G ++ ++         + + + + +   +++  L  A  +   ++ +L+L +     E +
Sbjct: 69  GAVDWQVAAISAVCSFLFSYLGTRLALMINQETLKTALVVVLPIVAVLLLLKRDFGTENQ 128

Query: 153 FPDNY------VKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSAL 205
                      +    G V GF  G +G G G    ++   +    +  A+  +  ++  
Sbjct: 129 SAGIPKKKAFLLAAGAGSVIGFYDGLIGPGTGTIAIIVFSAWMKYDLKTASGNAKILNLA 188

Query: 206 IAFPALLVRIYS 217
             + +L+  I+ 
Sbjct: 189 SNYASLIAVIFG 200


>gi|83312652|ref|YP_422916.1| permease [Magnetospirillum magneticum AMB-1]
 gi|82947493|dbj|BAE52357.1| Predicted permease [Magnetospirillum magneticum AMB-1]
          Length = 301

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 85/256 (33%), Gaps = 54/256 (21%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           VGGG ++ P+L       GI  +    VA+ +    +  +SV     H R   +++K+  
Sbjct: 34  VGGGFLLTPLLIML----GIPPA----VAVASGANQVLGSSVSGVFAHWRRRNVDIKMAL 85

Query: 102 DWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLMGILML-------------- 142
             +    I +     + + +         ++ ++  F   +G+LML              
Sbjct: 86  FLLAGGFIGSAAGVWLFAVLKRLGQIDLVISLSYVGFLGSVGLLMLVETLLAMRAGAAGR 145

Query: 143 ---------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
                           R R      +    +    G   G L+  +GVGGG     +M++
Sbjct: 146 PPGKRHVHHSWHGLPFRTRFPRSGLYISALLPLGVGAFGGLLAALMGVGGGFILVPMMIY 205

Query: 188 -YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
             G        TS           L   I+    +  L   S   V++   LI+L    +
Sbjct: 206 ILGMPTAVVVGTS-----------LFQMIFVTANVTLLQAMSTQSVDLPLALILLVGGAV 254

Query: 247 ITPLATKLSYMIGKKY 262
                ++L   +G + 
Sbjct: 255 GAQFGSRLGARLGGEK 270



 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 51/131 (38%), Gaps = 8/131 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-TS 82
            L +      G L+ L GVGGG ++VP++            +   V +GTSL  +   T+
Sbjct: 175 LLPLGVGAFGGLLAALMGVGGGFILVPMMIYIL-------GMPTAVVVGTSLFQMIFVTA 227

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++ ++     ++++ +    +    +     S + + +    L    ++  L +   M 
Sbjct: 228 NVTLLQAMSTQSVDLPLALILLVGGAVGAQFGSRLGARLGGEKLRLLLSLIVLAVCAEMT 287

Query: 143 KRDRLYCERKF 153
               L  E  F
Sbjct: 288 GTLVLPPEDPF 298


>gi|152985504|ref|YP_001347678.1| hypothetical protein PSPA7_2308 [Pseudomonas aeruginosa PA7]
 gi|150960662|gb|ABR82687.1| membrane protein, putative [Pseudomonas aeruginosa PA7]
          Length = 249

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 78/221 (35%), Gaps = 17/221 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I+ +          +   + 
Sbjct: 29  AIPALGVIFGLDQQLAQGTALVMVVPNVLLALWRYHQRNRIDPRQAGILALTGLLCAFLA 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKR--DRLYCERKFPD---NYVKYIWGMVTGFL 169
           S + + +D + + +AF +F L +   M  R   R       P     ++  +        
Sbjct: 89  SSVAARIDAARMREAFVVFLLALAGYMFWRLFRRPPQGAATPRYGLPWMGVLGLGAGSLG 148

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
                 GG + T +L   +G +   A   +  ++A     AL                  
Sbjct: 149 GLFGVGGGVLATPVLTSVFGLAQVVAQGLALALAAPSTAVALGTYAMH------------ 196

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           G V+    + +    +L      +L++ + ++ L + F   
Sbjct: 197 GHVDWRMGIPLALGGLLSISWGVRLAHALPERGLRMAFCAF 237


>gi|116495344|ref|YP_807078.1| permease [Lactobacillus casei ATCC 334]
 gi|239629797|ref|ZP_04672828.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301066916|ref|YP_003788939.1| putative permease [Lactobacillus casei str. Zhang]
 gi|116105494|gb|ABJ70636.1| Predicted permease [Lactobacillus casei ATCC 334]
 gi|239527409|gb|EEQ66410.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300439323|gb|ADK19089.1| Predicted permease [Lactobacillus casei str. Zhang]
          Length = 245

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 62/151 (41%), Gaps = 1/151 (0%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
            A  TSL    P   +    H R G +      + +      T++ SL   H+ +   + 
Sbjct: 41  TAAATSLFTAIPALAVGCYSHYRTGNMRFHAGNEILMTAVPATIIGSLAAPHIPEVVYSW 100

Query: 129 AFAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
           A A+  +++G+ ML++      ++     +  Y+ G ++G + G  G+ GG      ++ 
Sbjct: 101 AIAVIFVVLGVQMLRQSFARKVKKATQPAWFAYVLGAISGLMVGVAGLSGGGPIMAGLML 160

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSG 218
            G  +  A ATS+     ++    L+    G
Sbjct: 161 MGLDMPHAAATSSYALVALSVIGCLLHATQG 191


>gi|329754334|gb|AEC03565.1| magnetosome protein MamO [alpha proteobacterium LM-2]
          Length = 584

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 61/211 (28%), Gaps = 44/211 (20%)

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + +   +    +K  I       V+   + + +  S +     +F L+M    + 
Sbjct: 378 AAALRNDKAQLVQWDKVKPLIPWGVAGVVIGYFIGNAIGDSVVGVLLGLFALIMAGKAVL 437

Query: 144 -----------------------------------RDRLYCERKFPDNYVKYIWGMVTGF 168
                                              R +              + G+  G 
Sbjct: 438 EILQPNAGEDTAEAIAAAEAGDEMDELMALAEGTTRPKTSGIALPEGPTRSAVLGLPMGL 497

Query: 169 LSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            SG LG+ GG+    L  + G  S+  A A S+ +    +    +V    G         
Sbjct: 498 FSGILGISGGVIEVPLQRYIGRISLQNAIANSSVLVFWASVAGSVVAFIHG--------G 549

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S G ++  A + +  + I    +   L   +
Sbjct: 550 STGLIHWEAPVTLALVMIPGAYVGGILGARL 580



 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 11/99 (11%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V     G  SG+ G+ GG++ VP+             I +  A+  S  ++   SV   
Sbjct: 489 AVLGLPMGLFSGILGISGGVIEVPLQRYI-------GRISLQNAIANSSVLVFWASVAGS 541

Query: 87  MEHRRHGT----INMKILKDWIFVLPITTVVTSLMISHV 121
           +    HG     I+ +       V+     V  ++ + +
Sbjct: 542 VVAFIHGGSTGLIHWEAPVTLALVMIPGAYVGGILGARL 580


>gi|297538397|ref|YP_003674166.1| hypothetical protein M301_1205 [Methylotenera sp. 301]
 gi|297257744|gb|ADI29589.1| protein of unknown function DUF81 [Methylotenera sp. 301]
          Length = 256

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 63/265 (23%), Positives = 107/265 (40%), Gaps = 30/265 (11%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A F+ G L GL GVGGG +M P+L   F        I   +A+GT L   + T  + 
Sbjct: 5   YIIAGFVVGMLVGLTGVGGGSLMTPILVLFFH-------IKPALAVGTDLLYASVTKSVG 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSL------MISHVDKSFLNKAFAIFCLLMGI 139
              H + G I+ KI++   F     +++T+L      + S    + +     I  L+  +
Sbjct: 58  IFAHGKLGNIDWKIVRLLAFGSVPASILTTLYLRNQDIASDAAVNTIKFWLGIALLVTSL 117

Query: 140 LMLKR-------DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
            +L R       ++ +   +    Y+  I G+V G L     VG G      +L      
Sbjct: 118 SVLFRNQLVKFSNKEHLVNEKWTPYLTVILGLVLGALVTLTSVGAGALGVTALLI--IYP 175

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +A  T  G     A P  L        + GL   S+G V+   +  +L  SI    + +
Sbjct: 176 RRAINTIIGSDIAHAVPLTL--------VAGLGHASIGTVDYNLLGTLLIGSIPGIWIGS 227

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
            LS  + + ++ I  ++I+      
Sbjct: 228 HLSSKMAEHWVRIALALILIFVGLK 252



 Score = 40.4 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 51/119 (42%), Gaps = 6/119 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L ++   + G L  L  VG G + V  L   +          ++  +G+ +    P +++
Sbjct: 143 LTVILGLVLGALVTLTSVGAGALGVTALLIIY------PRRAINTIIGSDIAHAVPLTLV 196

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + + H   GT++  +L   +        + S + S + + ++  A A+  + +G+ ++ 
Sbjct: 197 AGLGHASIGTVDYNLLGTLLIGSIPGIWIGSHLSSKMAEHWVRIALALILIFVGLKLVF 255


>gi|296135797|ref|YP_003643039.1| protein of unknown function DUF81 [Thiomonas intermedia K12]
 gi|295795919|gb|ADG30709.1| protein of unknown function DUF81 [Thiomonas intermedia K12]
          Length = 268

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 57/261 (21%), Positives = 99/261 (37%), Gaps = 23/261 (8%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  D  +    L +V+    G   GL G GG ++ VP+L               HV +GT
Sbjct: 1   MLADLTLTQHILSVVSGVAVGFTLGLIGGGGSILAVPLLLYLVGYPNP------HVVIGT 54

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +   ++  + ++ + H R G +  K    +  V  I   + S +   VD   L   FAI 
Sbjct: 55  TALAVSINAYLNLIPHARAGNVRWKEAVIFAIVGAIAAYIGSTLGKAVDGKKLLFLFAIL 114

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKY------IWGMVTGFLSGALGVGGGIFTNLLMLF 187
            L++  LM++  ++    +   N  ++      +   + G LSG  G+GGG      ++F
Sbjct: 115 MLVIAALMIRPKKVKPG-EMEGNPGQFSMWKLVVSAAIVGTLSGFFGIGGGFLIVPGLVF 173

Query: 188 -YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
             G  +  A  +S            +    SG     L  W++  + I      +   + 
Sbjct: 174 ATGMPMLAAVGSSLFSVGTFGLTTAVNYASSG-----LLDWTVAVLYI---AGGIAGGVF 225

Query: 247 ITPLATKLSYMIGKKYLTIGF 267
              LAT L     K  L + F
Sbjct: 226 GARLATHLGKS-SKGTLNLIF 245



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 10/131 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++V++ + GTLSG FG+GGG ++VP L  A         + M  A+G+SL  +    + +
Sbjct: 145 LVVSAAIVGTLSGFFGIGGGFLIVPGLVFA-------TGMPMLAAVGSSLFSVGTFGLTT 197

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV---DKSFLNKAFAIFCLLMGILML 142
            + +   G ++  +   +I       V  + + +H+    K  LN  FA    ++   M+
Sbjct: 198 AVNYASSGLLDWTVAVLYIAGGIAGGVFGARLATHLGKSSKGTLNLIFAALVAVVAAYMI 257

Query: 143 KRDRLYCERKF 153
            ++        
Sbjct: 258 YKNMSAFGIHL 268


>gi|166366129|ref|YP_001658402.1| hypothetical protein MAE_33880 [Microcystis aeruginosa NIES-843]
 gi|166088502|dbj|BAG03210.1| hypothetical protein MAE_33880 [Microcystis aeruginosa NIES-843]
          Length = 245

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 13/197 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  +++A  L+   S L G G  L+++PVL        I   +   + +G         
Sbjct: 2   IIVTLMLAGSLAWFFSTLAGGGSPLILLPVLGWFLDAAVIPPVLTTGMLLG--------- 52

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                        I+      ++    + + + + + +H+   +L     IF +   +  
Sbjct: 53  --NVQRMGMYWRAIDWPSTVWYLPGAIMGSTLGAFVFAHLQFKWLPLVLGIFLVFSSLKQ 110

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L         +    Y     G +  FLSG +G   G   NL  + YG       AT + 
Sbjct: 111 LFPQEENPFFEIKTWYFMPS-GFIYAFLSGLVG-STGPMMNLFYINYGLVKEPMVATKSV 168

Query: 202 VSALIAFPALLVRIYSG 218
              ++    L+     G
Sbjct: 169 HMVVVHVAKLIAYAAFG 185


>gi|78357829|ref|YP_389278.1| hypothetical protein Dde_2787 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220234|gb|ABB39583.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 259

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 97/260 (37%), Gaps = 24/260 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + LI V SF+   +  L GVG  LV++P L+           +   +A  T L V  
Sbjct: 1   MTSMILITVCSFILSFIFALGGVGSALVLIPTLTWF--------GVPFSLARPTGLFVNT 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +   +   + +   ++ K+    I    I     + +   +   ++   F  F    G 
Sbjct: 53  VSMTGATFSNIKEKRLDFKLGIPIIISSTIMAPAGAYIGHIMPTKWVMLCFISFLTFSGF 112

Query: 140 LMLKRDRLYCERKFPDN---YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           +ML   +     ++ ++         G++ GF+SG LGVGGG   + LM+  G +  K  
Sbjct: 113 MMLFFKKSKYASQYREDRPVAWPTFVGIIAGFMSGLLGVGGGGLISPLMILKGFNPKKVA 172

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +A      +F A +     G             V+   ++     +     + TK+ +
Sbjct: 173 TVTAFSVPFSSFSAFVTYAAMGS------------VSFKILIFAGIAAWTGGYMGTKVMH 220

Query: 257 -MIGKKYLTIGFSMIMFTTS 275
             +  + +    + ++   +
Sbjct: 221 LKLQPETVKRVLACVLLIMA 240



 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 43/126 (34%), Gaps = 12/126 (9%)

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                +  +   +  F+    GVG  +     + ++G     A  T   V+ +    A  
Sbjct: 1   MTSMILITVCSFILSFIFALGGVGSALVLIPTLTWFGVPFSLARPTGLFVNTVSMTGATF 60

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             I           + LG       + I+  S ++ P    + +++  K++ + F   + 
Sbjct: 61  SNI-----KEKRLDFKLG-------IPIIISSTIMAPAGAYIGHIMPTKWVMLCFISFLT 108

Query: 273 TTSFVF 278
            + F+ 
Sbjct: 109 FSGFMM 114


>gi|194335611|ref|YP_002017405.1| hypothetical protein Ppha_0462 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194308088|gb|ACF42788.1| conserved hypothetical protein [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 123

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 3/123 (2%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I  ++     +G LSG+FGVGGG+++VP L   F   G+     +  ++   L  +   
Sbjct: 4   HIAALLFLGVSAGILSGMFGVGGGIIIVPALVLLF---GMTQQSAIATSLVALLLPVGLL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            V+ +    +  T N+ I       L       + +  H+    L KAFA+F  ++ + +
Sbjct: 61  GVIEYYHSGKISTTNIWIALLIAAGLFTGAYFGAKIAIHLSSDTLRKAFAVFMGIVALHL 120

Query: 142 LKR 144
             +
Sbjct: 121 WFK 123



 Score = 44.3 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 9/121 (7%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
                 G+  G LSG  GVGGGI     L+L +G +   A ATS     L      ++  
Sbjct: 6   AALLFLGVSAGILSGMFGVGGGIIIVPALVLLFGMTQQSAIATSLVALLLPVGLLGVIEY 65

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           Y    ++          NI   L+I            K++  +    L   F++ M   +
Sbjct: 66  YHSGKISTT--------NIWIALLIAAGLFTGAYFGAKIAIHLSSDTLRKAFAVFMGIVA 117

Query: 276 F 276
            
Sbjct: 118 L 118


>gi|258654479|ref|YP_003203635.1| hypothetical protein Namu_4359 [Nakamurella multipartita DSM 44233]
 gi|258557704|gb|ACV80646.1| protein of unknown function DUF81 [Nakamurella multipartita DSM
           44233]
          Length = 319

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 92/265 (34%), Gaps = 25/265 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + LI V  F++  + G  G+  G+      +     +G + +     A  T      
Sbjct: 1   MPTLLLIAVVGFVAQLVDGSLGMAYGVTT----TTLLLAIGTNPAA----ASATVHLAEI 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+++S   H + G ++ K++        I     + ++S +         A+  L +G+
Sbjct: 53  GTTLVSGASHWKFGNVDWKVVAKIGVPGAIGAFAGATVLSTISTEIAAPVMALILLTLGV 112

Query: 140 LMLKR------DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASI 192
            +L R       +    +     ++  + G+  GF+    G G G      +L  G    
Sbjct: 113 YILVRFTTFGLPKGNLGKPLRKRFLGPL-GLFAGFVDATGGGGWGPVGTPALLASGRIEP 171

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            K   +      L+A  A L  ++S              ++      IL   ++  P+A 
Sbjct: 172 RKVIGSIDTSEFLVAVAASLGFLFSLGSQG---------IDWSWAAAILLGGVVAAPVAA 222

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
            L   +  + L      ++  T+  
Sbjct: 223 YLVRHVPPRLLGSLVGGMIILTNTR 247


>gi|89099373|ref|ZP_01172250.1| hypothetical protein B14911_22382 [Bacillus sp. NRRL B-14911]
 gi|89085982|gb|EAR65106.1| hypothetical protein B14911_22382 [Bacillus sp. NRRL B-14911]
          Length = 243

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 80/243 (32%), Gaps = 21/243 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+I   FLS  +  L G G GL+ +P +            I +H A+  +      +S 
Sbjct: 4   TLLIFIGFLSAFIGTLAGSG-GLIGMPSMLLL--------GIPVHTAVAAAKFSNIFSSF 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            SF    R   I ++     +          +L+ + + +  +    A   +   ++ + 
Sbjct: 55  SSFFYLLRKREIGLRDCLQTLPFGLAGGATGALLANSIPEKAMTMLAASLLVFALVITML 114

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
           +       +       +      G   G  G G G       L  G +  +A A S   +
Sbjct: 115 KKPAETAGESGITPRLFPSIYFIGAYDGLFGPGQGTLLMYTFLNKGFNYIRAVAFSRFQT 174

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            +  F +  + + +G      P            L +L  S+L   LA + +  I  + L
Sbjct: 175 FISCFASFTIYLAAG-NFQLRPS-----------LCLLTGSLLGAHLAVRAAGKINPRCL 222

Query: 264 TIG 266
              
Sbjct: 223 KRL 225


>gi|190891835|ref|YP_001978377.1| hypothetical protein [Rhizobium etli CIAT 652]
 gi|190697114|gb|ACE91199.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652]
 gi|327193416|gb|EGE60315.1| hypothetical protein RHECNPAF_16005 [Rhizobium etli CNPAF512]
          Length = 261

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 94/275 (34%), Gaps = 38/275 (13%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  L  ++    G L G+ GVGGG +M P+L   F        +    A+GT L   A
Sbjct: 1   MTFEPLYSLSGLFVGALVGITGVGGGSLMTPLLVLLF-------GVHPATAVGTDLLYAA 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIF 133
            T       H  HG +N KI+           ++   +++ VD       + +  A    
Sbjct: 54  ITKTAGTAVHGMHGRVNWKIVGSLAAGSVPAALLMLWLLAGVDRKSIGVTNTITVALGWL 113

Query: 134 CLLMGILMLKRDRL-----------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++  I+++ R  +              R      +    G   G L     VG G    
Sbjct: 114 LVMTAIMLVFRGSILELARRAIGDRTPPRPTTILILTVTLGFCLGVLVTLTSVGAGALGV 173

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
            ++L      ++ +   +    +  +                    W +G ++   +  +
Sbjct: 174 TILLVLYPRLNVREIVGSDIVHAVPLTLIGGTGY------------WLIGEIDWAMLFAL 221

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           L  SI    + + L+  + ++ + I  +M +   +
Sbjct: 222 LVGSIPGIVIGSLLAPKLHERTIRIVLAMTLAVVA 256



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 47/122 (38%), Gaps = 6/122 (4%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + L +   F  G L  L  VG G + V +L   +  + + +       +G+ +    P
Sbjct: 145 TILILTVTLGFCLGVLVTLTSVGAGALGVTILLVLYPRLNVREI------VGSDIVHAVP 198

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +++    +   G I+  +L   +       V+ SL+   + +  +    A+   ++   
Sbjct: 199 LTLIGGTGYWLIGEIDWAMLFALLVGSIPGIVIGSLLAPKLHERTIRIVLAMTLAVVAWK 258

Query: 141 ML 142
           +L
Sbjct: 259 LL 260


>gi|187930596|ref|YP_001901083.1| hypothetical protein Rpic_3532 [Ralstonia pickettii 12J]
 gi|187727486|gb|ACD28651.1| protein of unknown function DUF81 [Ralstonia pickettii 12J]
          Length = 252

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 96/263 (36%), Gaps = 25/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L+ VA FL+G +  + G GGGLV +P L  A+       +I     +GT+       +
Sbjct: 3   FALLAVAGFLAGLIDAVAG-GGGLVQIPALFSAY------PNIAPATLIGTNKVASMSGT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + + + R   I        +    + +++ +  + H+    L +A      ++ +  +
Sbjct: 56  ATAAVRYGRTVRIYWGATAPAVVTAFMFSLLGAWALMHIPAEPLRRALPFVLAVLLVYTV 115

Query: 143 KRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +  L  +         +     + G   GF  G  G G G     + +  +G     A+
Sbjct: 116 AKKNLGADHAPSLQGWRERATALLAGAAIGFYDGVFGPGTGSFLMIVFVRVFGYDFLHAS 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A++  V+      ALL+                G V     +++   ++    + + L+ 
Sbjct: 176 ASTKIVNLATNVAALLLLAAK------------GHVWWQLGVVMAVANVAGNQVGSHLAL 223

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G +++   F +++       A
Sbjct: 224 RHGSRFVRKVFIVVVLALILKTA 246


>gi|15598043|ref|NP_251537.1| hypothetical protein PA2847 [Pseudomonas aeruginosa PAO1]
 gi|116050851|ref|YP_790326.1| hypothetical protein PA14_27270 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218890954|ref|YP_002439820.1| putative permease [Pseudomonas aeruginosa LESB58]
 gi|254235835|ref|ZP_04929158.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254241514|ref|ZP_04934836.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|9948934|gb|AAG06235.1|AE004711_7 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|115586072|gb|ABJ12087.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126167766|gb|EAZ53277.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126194892|gb|EAZ58955.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218771179|emb|CAW26944.1| putative permease [Pseudomonas aeruginosa LESB58]
          Length = 249

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 78/221 (35%), Gaps = 17/221 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  V++   + +   I+ +          +   + 
Sbjct: 29  AIPALGVIFGLDQQLAQGTALVMVVPNVVLALWRYHQRNRIDPRQAGVLALTGLLCAFLA 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKR--DRLYCERKFPD---NYVKYIWGMVTGFL 169
           S + + +D + + +AF IF L +   M  R   R       P     ++  +        
Sbjct: 89  SSVAARIDAARMREAFVIFLLALAGYMFWRLFRRPPQGGATPRYGLPWMGVLGLGAGSLG 148

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
                 GG + T +L   +G +   A   +  ++A     AL                  
Sbjct: 149 GLFGVGGGVLATPVLTSVFGLAQVVAQGLALALAAPSTAVALGTYAMH------------ 196

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           G V+    + +    +L      +L++ + ++ L + F   
Sbjct: 197 GHVDWRMGIPLALGGLLSISWGVRLAHALPERSLRMAFCAF 237


>gi|262373593|ref|ZP_06066871.1| permease [Acinetobacter junii SH205]
 gi|262311346|gb|EEY92432.1| permease [Acinetobacter junii SH205]
          Length = 256

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 93/256 (36%), Gaps = 25/256 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + I  +I  +F +GT+    G GGGL+ +P L      MG   +       GT+      
Sbjct: 4   ELILSLIFFAFCAGTIDAAVG-GGGLIQIPAL------MGALPNTSPATIFGTNKLASIC 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     R   +N K+L        I++   +  +S +    L     +  +++ I 
Sbjct: 57  GTASAAFSFARRVKLNWKLLLVIAIFAFISSFAGAACVSMIPTHILRPFVLVMLVVIAIY 116

Query: 141 MLKRDRLYC----ERKFPDNYVKYIWGMV-TGFLSGALGVG-GGIFTNLLMLFYGASIYK 194
              + +       +R  P   +    G +  GF  G  G G G  F    + F       
Sbjct: 117 TFMKKQFGQVHVDQRITPKLLIFAAVGSLAIGFYDGIFGPGTGSFFIFFFIRFLQVDFLH 176

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A S   + +    AL   I +G  L  L             L++   +I  + L  +L
Sbjct: 177 ASALSKIGNFMTNLAALSFFIPTGHVLFALG------------LMMALANIAGSLLGVRL 224

Query: 255 SYMIGKKYLTIGFSMI 270
           +   G  ++ I F ++
Sbjct: 225 ALKYGSGFIRILFLIL 240


>gi|260554127|ref|ZP_05826388.1| permease [Acinetobacter sp. RUH2624]
 gi|260404755|gb|EEW98264.1| permease [Acinetobacter sp. RUH2624]
          Length = 263

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 8/121 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++     ++G L+G+ GVGGG V+VP L K         ++ MH  + TSL +I   S +
Sbjct: 143 VLASIGIIAGLLTGMLGVGGGFVIVPALRKV-------TNLDMHSIVATSLMIIFLISGI 195

Query: 85  SFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           S + H   G    + I   +        ++    I  +  S + K FA+    + I M+ 
Sbjct: 196 SIVMHIAEGFHYPVAITSAFALACAFGMLLGRQAIRFIPASIVQKVFALMVFAVAIYMVI 255

Query: 144 R 144
           +
Sbjct: 256 K 256



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 79/247 (31%), Gaps = 33/247 (13%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP L              +  A    L  +A ++++  +E      +  +       +
Sbjct: 25  LAVPALMT-------SQGWTVAQAAPIGLLAVALSTLIGTIEGLFKKIVRYRAAIWIALI 77

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK-------------- 152
                 +  L+ + +   +L   F++    +G  ++                        
Sbjct: 78  GAPMAHIGILIANAISPVWLMLMFSLVMFTVGYRLISNRVSDFHNPPCQVNPSTGRFIWN 137

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
           F    V    G++ G L+G LGVGGG      +       ++   ATS  +  LI+  ++
Sbjct: 138 FKTGGVLASIGIIAGLLTGMLGVGGGFVIVPALRKVTNLDMHSIVATSLMIIFLISGISI 197

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           ++ I  G+            V I +   +         L  +    I    +   F++++
Sbjct: 198 VMHIAEGFHYP---------VAITSAFALACA--FGMLLGRQAIRFIPASIVQKVFALMV 246

Query: 272 FTTSFVF 278
           F  +   
Sbjct: 247 FAVAIYM 253


>gi|126656522|ref|ZP_01727783.1| hypothetical protein CY0110_22502 [Cyanothece sp. CCY0110]
 gi|126622208|gb|EAZ92915.1| hypothetical protein CY0110_22502 [Cyanothece sp. CCY0110]
          Length = 292

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 79/235 (33%), Gaps = 16/235 (6%)

Query: 52  LSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM-KILKDWIFVLPIT 110
           L      +G      + + +  SL  I  + ++          I   +++   I    I 
Sbjct: 58  LPILAGPLGYSARQVVPLNLAISLITILISLLVRGKILSLSTVIPYGQVIIFLIIGAMIM 117

Query: 111 TVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI-------WG 163
             + +    H+    L +   +F +++G  ++    L          +  +        G
Sbjct: 118 AFIGASWAKHLSNEKLERIILVFLIIIGCALIIEGCLPESLPALVPPIPGLQIIVALSCG 177

Query: 164 MVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           ++ G +S  LGV GG      ++F +G  I  A  +S  +S       LL   + G  +N
Sbjct: 178 LIIGLVSSVLGVAGGELIIPTLIFAFGVDIKIAGTSSLLISLPTVIVGLLRYHHQGSFIN 237

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             P           VL +   S +   +   L  +I    L I   +I+   +  
Sbjct: 238 KEPLKET-------VLPMSLGSFIGAIIGALLVGIIPSNLLKIVLGIILNIAALK 285



 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 52/129 (40%), Gaps = 12/129 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I + +    + G +S + GV GG +++P L  AF        + + +A  +SL +  PT 
Sbjct: 170 IIVALSCGLIIGLVSSVLGVAGGELIIPTLIFAF-------GVDIKIAGTSSLLISLPTV 222

Query: 83  VMSFMEHRRHGTI-----NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           ++  + +   G+        + +        I  ++ +L++  +  + L     I   + 
Sbjct: 223 IVGLLRYHHQGSFINKEPLKETVLPMSLGSFIGAIIGALLVGIIPSNLLKIVLGIILNIA 282

Query: 138 GILMLKRDR 146
            + +    +
Sbjct: 283 ALKVFLHSK 291


>gi|224370873|ref|YP_002605037.1| hypothetical protein HRM2_38150 [Desulfobacterium autotrophicum
           HRM2]
 gi|223693590|gb|ACN16873.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 424

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 104/296 (35%), Gaps = 65/296 (21%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    + I    L+G ++G  G GGG ++ P L        +   I   +A+GT L  I 
Sbjct: 78  LGIFVVSIFVGLLAGLITGCIGAGGGFIIAPAL--------MSAGIKGILAVGTDLFHIF 129

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH-------VDKSFLNKAFAI 132
             ++M  + HR+ G +++ +   ++    +      L+  +       +  +F++  +  
Sbjct: 130 AKAIMGSVIHRKLGNVSVPLAFVFVIGALMGATGGGLLNRYLYELNPVLSDAFISTVYVF 189

Query: 133 FCLLMGILML--------------------------------------KRDRLYCERKFP 154
               +GI  L                                          +    +  
Sbjct: 190 MLGFLGIYALTDFLRTMSPGKASGETGGDTMGGLPRKLQSISLPPMIKFDFEITPGGRSI 249

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
                 + G++ G  +G +GVGGG  T  + ++             GVS++      + +
Sbjct: 250 SWLFLVMSGVLVGLAAGIMGVGGGFLTFPIFVYVM-----------GVSSMTTVGTDIFQ 298

Query: 215 IYSGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           I    G   +  +++ GF+     + +L  S++   +   ++ ++    +   +++
Sbjct: 299 IIFTAGYASITQYAIYGFIFYTLAIGMLLGSLVGIQIGAMVTKVVSDITIRGFYAI 354



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 8/128 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS- 82
             ++++  L G  +G+ GVGGG +  P+             +     +GT +  I  T+ 
Sbjct: 252 LFLVMSGVLVGLAAGIMGVGGGFLTFPIFVYVM-------GVSSMTTVGTDIFQIIFTAG 304

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S  ++  +G I   +    +    +   + +++   V    +   +AI  L   +  L
Sbjct: 305 YASITQYAIYGFIFYTLAIGMLLGSLVGIQIGAMVTKVVSDITIRGFYAIAILSGFVNRL 364

Query: 143 KRDRLYCE 150
               +   
Sbjct: 365 FSLPIKLA 372


>gi|307104729|gb|EFN52981.1| hypothetical protein CHLNCDRAFT_137394 [Chlorella variabilis]
          Length = 352

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 49/110 (44%), Gaps = 6/110 (5%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
              L+G    + GVGGG+++VP++  A +      +I   V  GTSL  +  T+++S   
Sbjct: 70  VGVLAGVFGSICGVGGGVIIVPLIVSACK------TIPQRVVSGTSLAAVLSTALVSAHT 123

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           +   G +++           +T  + + + + ++ + L +    F L   
Sbjct: 124 YSSSGCVDLAAAALVSPAAMLTAPLGARLTARLNCTALRRILGFFLLAAA 173



 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 37/90 (41%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            L+ +         +GTSL  + P +  + ++H R G ++ ++         + +V  S 
Sbjct: 263 PLLALLTPFSQATVLGTSLLSMIPPASAALVQHSRLGNVDWRMAAALATGTALGSVGGSN 322

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           +       +L  AF +  L +G   L+  +
Sbjct: 323 LAVQAPPGYLEAAFCLGMLFLGRKTLQTAK 352


>gi|262379311|ref|ZP_06072467.1| transmembrane protein [Acinetobacter radioresistens SH164]
 gi|262298768|gb|EEY86681.1| transmembrane protein [Acinetobacter radioresistens SH164]
          Length = 258

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 92/256 (35%), Gaps = 25/256 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+ + +F  G +    G GGGLV +P L  A           +    GT+   +   +
Sbjct: 10  LILLGLFAFCGGLIDAAVG-GGGLVQLPALIHAL------PQYSLATVFGTNKIAVLAGT 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   + +   I  K++   +        + ++ +S + K  +        +L+ I   
Sbjct: 63  FSSIFTYIKRVKIVWKLIFPTMISAFTFAFLGAMSVSLIPKELMRYIVFCLLILIAIYTF 122

Query: 143 KRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKAT 196
            +  L           K      ++G + GF  G  G G G F   L +  +      A+
Sbjct: 123 IKKDLGKTHTELQYGKKEIGLGILFGGLIGFYDGIFGPGSGSFLIFLFVRIFSFDFLNAS 182

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A++  V+      +LL  I +            G V       +   ++L + + T L+ 
Sbjct: 183 ASAKLVNLGTFTASLLFFIPA------------GHVLWKVGTFVGICNVLGSLVGTILAL 230

Query: 257 MIGKKYLTIGFSMIMF 272
             G  ++ I F +++ 
Sbjct: 231 RYGSGFIRIFFLVLLI 246



 Score = 35.8 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L I+   L G   G+FG G G  ++ +  + F    ++       A  ++  V   T 
Sbjct: 141 IGLGILFGGLIGFYDGIFGPGSGSFLIFLFVRIFSFDFLN-------ASASAKLVNLGTF 193

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             S +     G +  K+         + ++V +++       F+   F +  + +   M
Sbjct: 194 TASLLFFIPAGHVLWKVGTFVGICNVLGSLVGTILALRYGSGFIRIFFLVLLIFLIGRM 252


>gi|154249724|ref|YP_001410549.1| hypothetical protein Fnod_1043 [Fervidobacterium nodosum Rt17-B1]
 gi|154153660|gb|ABS60892.1| protein of unknown function DUF81 [Fervidobacterium nodosum
           Rt17-B1]
          Length = 255

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 89/254 (35%), Gaps = 25/254 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++    FL+G +  + G GGGL+ +P              +  H A+GT+       ++ 
Sbjct: 10  ILFPLIFLAGFVDSIAG-GGGLISLPAYLFI--------GVPSHYALGTNKLSSTIGTIF 60

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S + + +   I   +    +    I + + + +   +    L     I   L  + +   
Sbjct: 61  STLRYAKGRAIIYSVGLPSVVGSLIGSYIGAKLALLLSPDRLKIILTILIPLAALFVFFG 120

Query: 145 DRLYCE-------RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +           +      + ++ G+  G   G  G G G     L +         A+
Sbjct: 121 RKNEQSVEKQINFKSVRTYIMSFLIGLSIGTYDGFFGPGTGTFLIILYVSILSIDHVSAS 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T+  V+      AL+  I+ G  +     +SLG   + A L  +  + L + LA K   
Sbjct: 181 GTAKIVNLASNIGALVTFIFGGKVI-----YSLG---LPAALFGIVGNWLGSGLALKKGS 232

Query: 257 MIGKKYLTIGFSMI 270
            + K  +     ++
Sbjct: 233 KVIKPIMLAVLVIL 246


>gi|328473423|gb|EGF44271.1| hypothetical protein VP10329_22140 [Vibrio parahaemolyticus 10329]
          Length = 251

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 96/259 (37%), Gaps = 26/259 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S ++ TL+ L G G GL+  P+L            +   VA+GT         + +
Sbjct: 9   LFFGSLVANTLASLSGGGAGLLQFPLLIFL--------GLPFSVALGTHKVASVALGLGA 60

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H + GTI + I    IFV  I  V+ + +I H+      K      L +GI    + 
Sbjct: 61  ASTHLKAGTIKLPIALYLIFVGSIGVVIGANLIVHIPDGIAEKMLGSMILALGIYSRLKK 120

Query: 146 RLYC-----ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA-T 198
           +L        R      +  I  M+ G ++G+L  G G+   L ++ ++G    +A A T
Sbjct: 121 QLGQIEIIKRRNQLGWILGGIGIMLIGIVNGSLTAGSGLLVTLFLVRWFGFDYKQAVAYT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
              V         +  + +G             ++   + ++L  S L   L    +   
Sbjct: 181 MICVGLFWNGIGGVAVVQAGAP-----------IHWAWLPVLLLSSFLGGSLGAWAATRY 229

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             + + I F ++ F     
Sbjct: 230 SNRVIKIAFEILTFAVGIK 248


>gi|323144141|ref|ZP_08078778.1| hypothetical protein HMPREF9444_01429 [Succinatimonas hippei YIT
           12066]
 gi|322416088|gb|EFY06785.1| hypothetical protein HMPREF9444_01429 [Succinatimonas hippei YIT
           12066]
          Length = 251

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 90/234 (38%), Gaps = 14/234 (5%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS-FMEHRRHGT 94
           +S LFG+GGG++MVP+L   F          M +   TSL ++  +++++     R+   
Sbjct: 1   MSALFGIGGGVLMVPLLMTVF------PQFSMQMVAATSLSIVIGSALINLTYFIRQKIA 54

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL--YCERK 152
           I+ K L  W   + I       +      + +   F +  L++ +    + +     +  
Sbjct: 55  ISYKGLVLWSAGMIIGVQGGFELSFIFHPNVIVGIFIVTMLILAVKTFLKLKKSYQVKED 114

Query: 153 FPDNYVKYIWGMVTGFL-----SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
              N      G +   L           GG I + L+        ++    +  +  +  
Sbjct: 115 VKVNAKDLAKGTLFCTLGGFIAGITGIGGGSIMSPLVNQLSFVKQHQVAVYTNYMMVIGG 174

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             +++  +     L     + +G+VN   V I++  S + + ++ +L   + +K
Sbjct: 175 VGSMIGYLSKPCKLMLENTFQVGYVNFTLVGIVIVGSFITSFVSMRLRGKLKRK 228


>gi|227534217|ref|ZP_03964266.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302]
 gi|227188151|gb|EEI68218.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302]
          Length = 245

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 62/151 (41%), Gaps = 1/151 (0%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
            A  TSL    P   +    H R G +      + +      T++ SL   H+ +   + 
Sbjct: 41  TAAATSLFTAIPALAVGCYSHYRTGNMRFHAGNEILMTAVPATIIGSLAAPHIPEVVYSW 100

Query: 129 AFAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
           A A+  +++G+ ML++      ++     +  Y+ G ++G + G  G+ GG      ++ 
Sbjct: 101 AIAVIFVVLGVQMLRQSFARKVKKSTQPAWFAYVLGAISGLMVGVAGLSGGGPIMAGLML 160

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSG 218
            G  +  A ATS+     ++    L+    G
Sbjct: 161 MGLDMPHAAATSSYALVSLSVIGCLLHATQG 191


>gi|114327532|ref|YP_744689.1| putative permease [Granulibacter bethesdensis CGDNIH1]
 gi|114315706|gb|ABI61766.1| putative permease [Granulibacter bethesdensis CGDNIH1]
          Length = 258

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 87/240 (36%), Gaps = 25/240 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP++      +G+      H+A+GTS   +A  +    + H R  T+  +    +  
Sbjct: 31  ILAVPLMVYL---VGVPSP---HMAIGTSALAVAANAFSGLIGHARAHTVKWRCGGMYAA 84

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR----LYCERKFPDNYVKYI 161
              +  +  S++   ++   L   FA+  +++ + ML+  +       E           
Sbjct: 85  SGVLGALGGSVLGKMMNGQKLLFLFALLMIVIAVQMLRGRKREGNPGAECNREKAPKVLA 144

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWG 220
           +G+ TG  SG  G+GGG      ++   G  +  A  +S                +SG  
Sbjct: 145 YGLGTGLFSGFFGIGGGFLIVPGLVASTGMPLLNAVGSSLVAVTAFGLTTAASYAFSGL- 203

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK--YLTIGFSMIMFTTSFVF 278
                      V+    ++ +   I  + +   +S  +  +   L   F+ ++F  +   
Sbjct: 204 -----------VDWPLAIMFILGGIAGSMVGIAVSRYLAGRSGMLGTVFAGLIFVVAAYM 252


>gi|49082248|gb|AAT50524.1| PA2847 [synthetic construct]
          Length = 250

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 78/221 (35%), Gaps = 17/221 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  V++   + +   I+ +          +   + 
Sbjct: 29  AIPALGVIFGLDQQLAQGTALVMVVPNVVLALWRYHQRNRIDPRQAGVLALTGLLCAFLA 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKR--DRLYCERKFPD---NYVKYIWGMVTGFL 169
           S + + +D + + +AF IF L +   M  R   R       P     ++  +        
Sbjct: 89  SSVAARIDAARMREAFVIFLLALAGYMFWRLFRRPPQGGATPRYGLPWMGVLGLGAGSLG 148

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
                 GG + T +L   +G +   A   +  ++A     AL                  
Sbjct: 149 GLFGVGGGVLATPVLTSVFGLAQVVAQGLALALAAPSTAVALGTYAMH------------ 196

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           G V+    + +    +L      +L++ + ++ L + F   
Sbjct: 197 GHVDWRMGIPLALGGLLSISWGVRLAHALPERSLRMAFCAF 237


>gi|239813334|ref|YP_002942244.1| hypothetical protein Vapar_0315 [Variovorax paradoxus S110]
 gi|239799911|gb|ACS16978.1| protein of unknown function DUF81 [Variovorax paradoxus S110]
          Length = 252

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 98/263 (37%), Gaps = 25/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++  AS L+G +  + G GGGL++VP L   F   G   +      +GT+       +
Sbjct: 3   MLVVTGASLLAGFVDSIVG-GGGLILVPALFAVFP--GAPPATL----LGTNKSASIWGT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +  +  +   +    L     +    +++ +  ++     FL +A  +  L + +  +
Sbjct: 56  AAAAAQFSQRVQMRWGALWPAALLGFAGSMLGAWGVTVFPGDFLRRALPVVLLGVLLYTI 115

Query: 143 KRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKAT 196
            R  L            +       G+  GF  G  G G G F   L + + G     A+
Sbjct: 116 ARKDLGRNHVPRFSGRAETLAACAIGLSIGFYDGFFGPGAGSFLVFLFVRWMGYDFLNAS 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A++  ++ L    ALL+                G V     L++   ++  + L T+++ 
Sbjct: 176 ASAKIINTLTNAAALLLLALK------------GHVWWHYGLVMAVANVAGSLLGTRVAL 223

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F +++       A
Sbjct: 224 KHGAGFVRGVFIVVVSALILKTA 246


>gi|146343317|ref|YP_001208365.1| hypothetical protein BRADO6542 [Bradyrhizobium sp. ORS278]
 gi|146196123|emb|CAL80150.1| conserved hypothetical protein; putative membrane protein
           [Bradyrhizobium sp. ORS278]
          Length = 261

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 11/206 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   L G   GL G GG ++ VP++      +G+ +    H+A+G+S   +A  + 
Sbjct: 8   ILGVLCGGLVGFSLGLVGGGGSVLAVPLMVYV---VGVPEP---HIAIGSSAIAVATNAA 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++   H R GT+   I   +     +     SL+   VD   L   FA+  +++ +LMLK
Sbjct: 62  VNLANHARGGTVIWPIAALFAAAGIVGAFTGSLLGKMVDGQKLLALFALVMMVIALLMLK 121

Query: 144 RDR----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
                     +    +      +G+ TG LSG  G+GGG      LM   G  I  A ++
Sbjct: 122 TRARVGIPDVKMSMANVPAIVGFGLATGTLSGFFGIGGGFLIVPALMAATGMPIMNAVSS 181

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGL 224
           S                +SG     L
Sbjct: 182 SLVAVTTFGLTTAASYGWSGLVAWDL 207


>gi|107102397|ref|ZP_01366315.1| hypothetical protein PaerPA_01003459 [Pseudomonas aeruginosa PACS2]
          Length = 249

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 78/221 (35%), Gaps = 17/221 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  V++   + +   I+ +          +   + 
Sbjct: 29  AIPALGVIFGLDQQLAQGTALVMVVPNVVLALWRYHQRNRIDPRQAGILALTGLLCAFLA 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKR--DRLYCERKFPD---NYVKYIWGMVTGFL 169
           S + + +D + + +AF IF L +   M  R   R       P     ++  +        
Sbjct: 89  SSVAARIDAARMREAFVIFLLALAGYMFWRLFRRPPQGGATPRYGLPWMGVLGLGAGSLG 148

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
                 GG + T +L   +G +   A   +  ++A     AL                  
Sbjct: 149 GLFGVGGGVLATPVLTSVFGLAQVVAQGLALALAAPSTAVALGTYAMH------------ 196

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           G V+    + +    +L      +L++ + ++ L + F   
Sbjct: 197 GHVDWRMGIPLALGGLLSISWGVRLAHALPERSLRMAFCAF 237


>gi|332296379|ref|YP_004438302.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
 gi|332179482|gb|AEE15171.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
          Length = 433

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 105/306 (34%), Gaps = 66/306 (21%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
             ++        +  I+V   LSG ++G+ G GGG V+ P L            +   +A
Sbjct: 70  HAYMPAVATTQMLLGILVIGLLSGLITGVIGAGGGYVLTPALMTL--------GVKGIMA 121

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM-------ISHVDK 123
           +GT    I   +++    H++ G +N+ +   ++    +     + +          +  
Sbjct: 122 VGTDQFAIFANAILGTTLHKKLGNVNLWLAVWFVVGSFVGVTTGAAINRSIYALSPALSD 181

Query: 124 SFLNKAFAIFCLLMGIL---------------------------------------MLKR 144
           +F++  + I   ++G                                         +   
Sbjct: 182 AFISTVYVILLGILGFYSTMDYIKLRRGQKDTSRKAILDVRTNFSRWLQSIPLKPRIKFD 241

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
           D ++        Y   I G   GF++  +GVGGG  T  L ++             GVS 
Sbjct: 242 DHIFEGGLSISVYPVIICGFTVGFVAAIMGVGGGFLTFPLFVY-----------GLGVST 290

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
                  +++I      + +  +++ G++     + +L  S++   +   ++  +    +
Sbjct: 291 FTTVGTDILQIIFTTAYSSIFNYAIYGYIFYSIAITMLLGSLIGVQIGAMVTTFVKGSTI 350

Query: 264 TIGFSM 269
            + +++
Sbjct: 351 KLFYAL 356



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 8/128 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT-SVM 84
           +I+  F  G ++ + GVGGG +  P+             +     +GT +  I  T +  
Sbjct: 256 VIICGFTVGFVAAIMGVGGGFLTFPLFVYGL-------GVSTFTTVGTDILQIIFTTAYS 308

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S   +  +G I   I    +    I   + +++ + V  S +   +A+  L   +  L  
Sbjct: 309 SIFNYAIYGYIFYSIAITMLLGSLIGVQIGAMVTTFVKGSTIKLFYALTILAGFVNRLAA 368

Query: 145 DRLYCERK 152
                   
Sbjct: 369 LPPRLSDA 376


>gi|253999225|ref|YP_003051288.1| hypothetical protein Msip34_1516 [Methylovorus sp. SIP3-4]
 gi|253985904|gb|ACT50761.1| protein of unknown function DUF81 [Methylovorus sp. SIP3-4]
          Length = 264

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 57/276 (20%), Positives = 92/276 (33%), Gaps = 42/276 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I + F  G L G+ GVGGG +M P+L   F            VA+GT L   A T    
Sbjct: 5   YIASGFAVGLLVGITGVGGGSLMTPLLVFLFGF-------KPAVAVGTDLLFAAITKTGG 57

Query: 86  FMEHR-RHGTINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAIFCLLMG 138
              H   H +++ K++           V T  +I H+          +  +  I  +L  
Sbjct: 58  VWVHHGTHKSVDWKVVSWLSMGSLPFAVGTIYVIKHLMSIGKETTGLITYSLGIALILTA 117

Query: 139 ILMLKRDRLYCERKFP--------------DNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
             +L R  L  +                        + G + G L     VG G    + 
Sbjct: 118 CALLIRSVLMRQHTREIEDVVVSTGRFKEMQIPATILTGAILGVLVTLSSVGAGALGTIA 177

Query: 185 MLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           +LF     S  K   T    +  +   A +              WSLG V+   +  +L 
Sbjct: 178 ILFLFPKMSTLKVVGTDLAHAIPLTAVAGIG------------HWSLGHVDFTLLGSLLI 225

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            S+    + + +S  I +K L    + ++      F
Sbjct: 226 GSLPGIWIGSHISARIPEKVLRPVLATLLLIIGLKF 261



 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 44/121 (36%), Gaps = 6/121 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I+   + G L  L  VG G +    +   F  M           +GT L    P +
Sbjct: 149 IPATILTGAILGVLVTLSSVGAGALGTIAILFLFPKM------STLKVVGTDLAHAIPLT 202

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++ + H   G ++  +L   +        + S + + + +  L    A   L++G+  +
Sbjct: 203 AVAGIGHWSLGHVDFTLLGSLLIGSLPGIWIGSHISARIPEKVLRPVLATLLLIIGLKFV 262

Query: 143 K 143
            
Sbjct: 263 L 263


>gi|313201313|ref|YP_004039971.1| hypothetical protein MPQ_1580 [Methylovorus sp. MP688]
 gi|312440629|gb|ADQ84735.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 264

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 56/276 (20%), Positives = 92/276 (33%), Gaps = 42/276 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I + F  G L G+ GVGGG +M P+L   F            VA+GT L   A T    
Sbjct: 5   YIASGFAVGLLVGITGVGGGSLMTPLLVFLFGF-------KPAVAVGTDLLFAAITKTGG 57

Query: 86  FMEHR-RHGTINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAIFCLLMG 138
              H   H +++ K++           + T  +I H+          +  +  I  +L  
Sbjct: 58  VWVHHGTHKSVDWKVVSWLSMGSLPFAIGTIYVIKHLMSIGKETTGLITYSLGIALILTA 117

Query: 139 ILMLKRDRLYCERKFP--------------DNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
             +L R  L  +                        + G + G L     VG G    + 
Sbjct: 118 CALLIRSVLMRQHTREIEDVVVSTGRFKEMQIPATILTGAILGVLVTLSSVGAGALGTIA 177

Query: 185 MLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           +LF     S  K   T    +  +   A +              WSLG V+   +  +L 
Sbjct: 178 ILFLFPKMSTLKVVGTDLAHAIPLTAVAGIG------------HWSLGHVDFTLLGSLLI 225

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            S+    + + +S  I +K L    + ++      F
Sbjct: 226 GSLPGIWIGSHISARIPEKVLRPVLATLLLIIGLKF 261



 Score = 40.1 bits (93), Expect = 0.38,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 44/121 (36%), Gaps = 6/121 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I+   + G L  L  VG G +    +   F  M           +GT L    P +
Sbjct: 149 IPATILTGAILGVLVTLSSVGAGALGTIAILFLFPKM------STLKVVGTDLAHAIPLT 202

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++ + H   G ++  +L   +        + S + + + +  L    A   L++G+  +
Sbjct: 203 AVAGIGHWSLGHVDFTLLGSLLIGSLPGIWIGSHISARIPEKVLRPVLATLLLIIGLKFV 262

Query: 143 K 143
            
Sbjct: 263 L 263


>gi|297379451|gb|ADI34338.1| Hypothetical protein HPV225_0243 [Helicobacter pylori v225d]
          Length = 277

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 75/215 (34%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G +++K          +  ++ S ++  +D   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLKEGSFAALGGLMGAILGSFILKIIDDKILMAVFVVVVCYTFIKYAFS 119

Query: 145 DRLYCE-------------------RKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
           +    E                   R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 NNKKPEHFEEMHFDLHANNKTPEKKRPLPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|88803422|ref|ZP_01118948.1| hypothetical protein PI23P_12557 [Polaribacter irgensii 23-P]
 gi|88780988|gb|EAR12167.1| hypothetical protein PI23P_12557 [Polaribacter irgensii 23-P]
          Length = 259

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 46/146 (31%), Gaps = 6/146 (4%)

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
            T+L         +     +   IN + +   +        +   +   +++ F      
Sbjct: 54  ATALLCNIVVVSSNVFFFSQQKQINWRKIFPLVLCSVPFAFLGGYV--KINQQFFFILLG 111

Query: 132 IFCLLMGILMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
              L     M    ++     E            G V GF+SG +G+GGGIF   L+   
Sbjct: 112 STLLFAASSMWLLKQIILSKNEHAPSRPLKNIGLGGVIGFISGMVGIGGGIFLAPLLHLT 171

Query: 189 GAS-IYKATATSAGVSALIAFPALLV 213
                 K  AT++    + +   +  
Sbjct: 172 NWDSPKKIAATASVFILVNSLAGVFG 197


>gi|116053172|ref|YP_793493.1| hypothetical protein PA14_66420 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894123|ref|YP_002442992.1| hypothetical protein PLES_54141 [Pseudomonas aeruginosa LESB58]
 gi|254238268|ref|ZP_04931591.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|115588393|gb|ABJ14408.1| putative membrane protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126170199|gb|EAZ55710.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|218774351|emb|CAW30168.1| putative membrane protein [Pseudomonas aeruginosa LESB58]
          Length = 239

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 68/200 (34%), Gaps = 13/200 (6%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S + H + G +N  +    +    I  V+ +++I+  D   L    + + LLMG
Sbjct: 45  VFTTGFSGISHVKLGNVNKSLFLRLLLPGMIGAVLGAVLITRFDGHQLKPFISAYLLLMG 104

Query: 139 ILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           + +L +  R   +R+ P +  K       GF+  A G G G      ++  G+       
Sbjct: 105 LYILSKAYRHVIKRRAPRHVAKLAL--FGGFVDAAGGGGWGPVVTSSLIGSGSDPRTTIG 162

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +       +   +    I      +              V  ++   +   P A  L   
Sbjct: 163 SVNFAEFFLTIASATSFILLAGQPDT----------WKMVAGLVFGGLFAAPFAALLCKK 212

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           +  + L +    ++   S  
Sbjct: 213 LSPRTLLVIVGTLITLISAY 232


>gi|317181535|dbj|BAJ59319.1| hypothetical protein HPF57_0245 [Helicobacter pylori F57]
          Length = 277

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 76/215 (35%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G +++K      F   +  ++ S ++  +D   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLKEGSFAAFGGLMGAILGSFILKIIDDKILMAVFVVVVCYTFIKYAFS 119

Query: 145 DRLYCE-------------------RKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
           +    E                   R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 NNKKPEHFEEMHFDLHANNKTPEKKRSLPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|153812141|ref|ZP_01964809.1| hypothetical protein RUMOBE_02538 [Ruminococcus obeum ATCC 29174]
 gi|149831796|gb|EDM86882.1| hypothetical protein RUMOBE_02538 [Ruminococcus obeum ATCC 29174]
          Length = 219

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 8/164 (4%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             + +H A+ T+       + ++   + + G +  KI    IF     + + S +   + 
Sbjct: 3   AGLPVHTAIATNKMSSFMGTSVATYHYMKKGFMKWKICIPAIFGAIAGSWMGSHLALLIS 62

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK-------YIWGMVTGFLSGALGV 175
              L  A  I   ++   +L+   L    +   + V         +  +V G   G  G 
Sbjct: 63  DRVLKIAMVIVLPVILFYVLRSKALQGNDENTTDAVNGMLIFKCILIAVVIGIYDGIYGP 122

Query: 176 GGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           G G F  LL   F   ++  A  T+  ++      AL+V + +G
Sbjct: 123 GTGTFLMLLFTGFCHMTLNDAAGTTKAINLTTNITALVVFLING 166


>gi|219669180|ref|YP_002459615.1| hypothetical protein Dhaf_3156 [Desulfitobacterium hafniense DCB-2]
 gi|219539440|gb|ACL21179.1| protein of unknown function DUF81 [Desulfitobacterium hafniense
           DCB-2]
          Length = 312

 Score = 56.2 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 8/122 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +A  L   LS   GVGGG ++VP ++             M++  GTS   I  +S 
Sbjct: 192 IVVFIAGLLVAILSASLGVGGGFLLVPFMTSILGF-------PMYIVAGTSTLSILVSSS 244

Query: 84  MSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            S + +   G ++++  L   +  + I TVV + +  +++  ++    A     +G+   
Sbjct: 245 TSILNYLSMGSSLDLTFLAFELAGVAIGTVVAARISKYINARYMKMFLAFLLFYIGLKYF 304

Query: 143 KR 144
             
Sbjct: 305 LP 306



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 51/125 (40%), Gaps = 12/125 (9%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLV 213
           +  V +I G++   LS +LGVGGG      M    G  +Y    TS     + +  ++L 
Sbjct: 190 NAIVVFIAGLLVAILSASLGVGGGFLLVPFMTSILGFPMYIVAGTSTLSILVSSSTSILN 249

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            +  G  L+           +  +   L    + T +A ++S  I  +Y+ +  + ++F 
Sbjct: 250 YLSMGSSLD-----------LTFLAFELAGVAIGTVVAARISKYINARYMKMFLAFLLFY 298

Query: 274 TSFVF 278
               +
Sbjct: 299 IGLKY 303


>gi|330944318|gb|EGH46378.1| hypothetical protein PSYPI_30351 [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 144

 Score = 56.2 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 50/130 (38%), Gaps = 9/130 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 9   LTTLAILAVVAFIAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     +    +   + +++  ++   +LN+   +     G+
Sbjct: 60  FGSATASFTFYRRKLFDPRQWLHAVLGTAVGAALGAVIAHYLPAEWLNQMLPVIVFGCGL 119

Query: 140 LMLKRDRLYC 149
            +L       
Sbjct: 120 YLLFGGTPKA 129


>gi|327405888|ref|YP_004346726.1| siroheme synthase [Fluviicola taffensis DSM 16823]
 gi|327321396|gb|AEA45888.1| siroheme synthase [Fluviicola taffensis DSM 16823]
          Length = 494

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 90/265 (33%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D +       I+A F++  + G  G+  G   V   +      GI  ++   +A+     
Sbjct: 244 DSLTIDFAYFILAGFVAQMIDGALGMAYG---VSATTFLLSY-GITPAVS-SMAVH---A 295

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK--SFLNKAFAIFC 134
               TS +S + H R G +N ++ K  +    +  +V + ++S  +     +    + + 
Sbjct: 296 SEIFTSGVSGIMHLRFGNVNNRLFKSILIPGVLGAIVGAYVLSEFESYNEIIKPIVSAYT 355

Query: 135 LLMGILMLKR-DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
           L +G L++ +  R    RK               FL    G G G   +  ++  G    
Sbjct: 356 LFLGGLIIYKVLRKKQARKKVTKVGWLGLLGG--FLDSIGGGGWGPVVSSTLIARGKHPR 413

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN-IGAVLIILPISILITPLAT 252
               +       ++  +                  +G  N    +  ++   +   P+A 
Sbjct: 414 MIVGSVNLAEFFVSLASSFTFFTV-----------IGTSNVWQPIAGLVLGGVCAAPIAA 462

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
            L+  +  K + +   +++   S  
Sbjct: 463 YLASKLNIKAMMLFVGIVVVIVSLR 487


>gi|326384823|ref|ZP_08206499.1| hypothetical protein SCNU_17862 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326196485|gb|EGD53683.1| hypothetical protein SCNU_17862 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 282

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 85/263 (32%), Gaps = 46/263 (17%)

Query: 44  GGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDW 103
           GG+ +VP+L+           +    A+  SL  +   S  S       G  N+++    
Sbjct: 27  GGIFVVPLLTLV-------ADVPFLTAVAVSLVSVIACSCASAPPFLVSGLTNLRLAVVL 79

Query: 104 IFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK--FPDNYVKYI 161
                   ++  LMI  V    L   FA   L+    ++   R   +       +  + +
Sbjct: 80  EVCTAAGALLGILMIGMVPNPVLYATFAAVLLISAAQLIAGRRTGEQVPAGPASSVSRSV 139

Query: 162 WG------------------------MVTGFLSGALGVGGGIFTNLLM-LFYGASIYKAT 196
            G                           G LS  LG+G G+     M       I  ++
Sbjct: 140 AGTYRDHDGEAVGYQVARLPLGMTYMFGAGVLSALLGIGSGVLKIPAMDSAMRLPIKVSS 199

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           AT+  +  + A  A +  + SG     L               ++  S+  + +  ++  
Sbjct: 200 ATANLMIGVTACGAAIAYLVSGTLDLQL------------AAPVVLGSLAGSLVGARILV 247

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
            +  + L + F++++   +   A
Sbjct: 248 RVSGQSLRVVFTVVLIALAIPMA 270



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 52/111 (46%), Gaps = 7/111 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G LS L G+G G++ +P +  A +L        + V+  T+  +I  T+  + + + 
Sbjct: 166 FGAGVLSALLGIGSGVLKIPAMDSAMRL-------PIKVSSATANLMIGVTACGAAIAYL 218

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             GT+++++    +      ++V + ++  V    L   F +  + + I M
Sbjct: 219 VSGTLDLQLAAPVVLGSLAGSLVGARILVRVSGQSLRVVFTVVLIALAIPM 269


>gi|328553864|gb|AEB24356.1| integral inner membrane protein [Bacillus amyloliquefaciens TA208]
          Length = 254

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 95/268 (35%), Gaps = 36/268 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I+   F+ GTL GL GVGG  ++ P+L       GI+ S    +A+GT L   + T +  
Sbjct: 5   IVFMGFIVGTLVGLTGVGGAALLTPLLIVL----GINPS----IAVGTDLLYNSITKLFG 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK----------SFLNKAFAIFCL 135
            + H +  T++ K++         +      ++                 L     +  +
Sbjct: 57  VVSHWKQRTVHFKLVGYLALGSIPSASAAIGVLHLFPAFHQHQEQIIKHALGYVLTLVVI 116

Query: 136 LMGILMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YG 189
            +   +    +L   R           +  + G++ GF+ G   +G G    + ML+ + 
Sbjct: 117 SIIARLFFDKKLRPNRWQQKTLEEKRGLMILIGVIFGFIVGLTSIGSGSLFAIAMLYLFR 176

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
               +   T    + L+   A            GL   S G V+   VL +L  S+    
Sbjct: 177 MKTAEVVGTDIAHAFLLVTAA------------GLLNASFGSVDYLLVLNLLIGSVPGVL 224

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L +  S     + L    + I+  +   
Sbjct: 225 LGSFFSPKFSPRPLQFVMAAIILISGIK 252



 Score = 35.8 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+I+   + G + GL  +G G +    +   F+       +     +GT +         
Sbjct: 144 LMILIGVIFGFIVGLTSIGSGSLFAIAMLYLFR-------MKTAEVVGTDIAHAFLLVTA 196

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + +   G+++  ++ + +       ++ S          L    A   L+ GI ++
Sbjct: 197 AGLLNASFGSVDYLLVLNLLIGSVPGVLLGSFFSPKFSPRPLQFVMAAIILISGIKLI 254


>gi|329123459|ref|ZP_08252023.1| membrane protein [Haemophilus aegyptius ATCC 11116]
 gi|327471041|gb|EGF16496.1| membrane protein [Haemophilus aegyptius ATCC 11116]
          Length = 266

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 91/218 (41%), Gaps = 15/218 (6%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
           N  +   +  +  +  ICL+++ASF++G +  + G G GL+++P     F ++G+     
Sbjct: 3   NLFIDNSIIANYFILGICLLVIASFVAGYIDSIAG-GAGLILIPA----FLIVGLPP--- 54

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
             +A+G    V    ++ +     +  +I  KI+   I    +   + + +I  +    +
Sbjct: 55  -QLALGQEKLVSTIGTIAAIKNFMQSKSIVWKIIPIGIVSALLGAYIGAEVILMLPTHVI 113

Query: 127 N-KAFAIFCLLMGILMLKRDRLYCERK----FPDNYVKYIWGMVTGFLSGALGVG-GGIF 180
           N   FA   L +   + K   L  E +           +I  ++ GF  G  G G G IF
Sbjct: 114 NYIIFAFLPLGLATTLFKGKLLKQENQEQEIKNSALSVFITCLIVGFYDGFFGPGTGSIF 173

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
              L L    S+ +A+ATS   +      A +    +G
Sbjct: 174 IIALFLINKLSLLRASATSKIFNFSSNIGAFVSFAIAG 211


>gi|308270946|emb|CBX27556.1| hypothetical protein N47_H23780 [uncultured Desulfobacterium sp.]
          Length = 119

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 8/124 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++ L I    + G  +   G+GGG +MVP+L                 A+GTS   I   
Sbjct: 4   HLILTIFFGIIVGIGASFSGLGGGFLMVPLLIFM--------GFSAQKAVGTSFLGILII 55

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           SV + + H +   ++ K          I   + + +I H+  +   K FA   +L+   +
Sbjct: 56  SVSALLAHGKLAHVDYKTGIMLGMGGFIGAQIGARLIDHISTANFKKLFAAILVLLAAYL 115

Query: 142 LKRD 145
             + 
Sbjct: 116 FFQK 119



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 12/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +   +G++ G  +   G+GGG     L++F G S  KA  TS     +I+  ALL     
Sbjct: 7   LTIFFGIIVGIGASFSGLGGGFLMVPLLIFMGFSAQKAVGTSFLGILIISVSALLA---- 62

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                      L  V+    +++     +   +  +L   I        F+ I+   +  
Sbjct: 63  --------HGKLAHVDYKTGIMLGMGGFIGAQIGARLIDHISTANFKKLFAAILVLLAAY 114


>gi|265991369|ref|ZP_06103926.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|263002153|gb|EEZ14728.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
           melitensis bv. 1 str. Rev.1]
          Length = 230

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 77/213 (36%), Gaps = 18/213 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+GT+       S  + + + R G +N+           + +V+ +L+ + +  + +  A
Sbjct: 16  ALGTNKLQGLFGSSSATIAYARKGHVNILQQWPEALASLLGSVLVALLATVLPVNIMRAA 75

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM----VTGFLSGALGVG-GGIFTNLL 184
             +  + + I    +  L    +       +++G+    + GF  G  G G G  F    
Sbjct: 76  LPMLLIAIAIYFALKPSLGDVDRA-RRIGPFLFGVTLVPLIGFYDGLFGPGTGSFFMLAF 134

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           + F G  + KATA +  ++       L                ++G +N    + +    
Sbjct: 135 VAFAGYGVLKATAHTKLLNCASNIGGLATFA------------AVGVINWKIGISMGIAQ 182

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            +   +  +L+  IG + +     ++    +  
Sbjct: 183 FIGAQIGARLAMKIGSRIIKPLLIVVSLALAGR 215


>gi|253582850|ref|ZP_04860069.1| membrane protein [Fusobacterium varium ATCC 27725]
 gi|251835284|gb|EES63826.1| membrane protein [Fusobacterium varium ATCC 27725]
          Length = 255

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 95/257 (36%), Gaps = 27/257 (10%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           + ++ +     ++    F+   +  + G GGGL+ +P     +   G+      H+A+GT
Sbjct: 1   MLRELLSSEFIILACLCFIGAFIDSVAG-GGGLITLPA----YLASGLPP----HIALGT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +      + V S + + R G IN K++K           +   +I      ++N    I 
Sbjct: 52  NKLSSFFSGVGSSINYARSGKINWKLMKKLAPFSLAGAFIGVKIIIGTKPQYINYIVFIA 111

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVGGGIFTNLL-MLF 187
            +++    +   ++  E  F            I   V GF +G LG G G F     M  
Sbjct: 112 LVIVLFYTMANKKMGHESTFTGLTKSNITKGMIMAFVIGFYNGFLGPGTGSFLVFFLMKI 171

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           +G    +A   S  ++ +    +LLV   SG             V     + I  + IL 
Sbjct: 172 FGYDFVEANGDSKILNLVGNLTSLLVFGISGK------------VYFLYGIPISIVMILG 219

Query: 248 TPLATKLSYMIGKKYLT 264
               ++ +   G K++ 
Sbjct: 220 AQCGSRCAINKGSKFIK 236


>gi|311278712|ref|YP_003940943.1| hypothetical protein Entcl_1398 [Enterobacter cloacae SCF1]
 gi|308747907|gb|ADO47659.1| protein of unknown function DUF81 [Enterobacter cloacae SCF1]
          Length = 269

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 13/180 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +  +   + L+G +  + G GGGL+ +P L       G+  +     A+ T+       
Sbjct: 14  LLATLFFIALLAGFIDSIAG-GGGLLTIPALMAV----GMSPAQ----ALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           SV + +   R   +N+   K  I +  + +   +L++ HV    L +   +  + +G+  
Sbjct: 65  SVSASLYFIRRKVVNLGDQKLNILMTFLGSTSGALLVQHVQSDILRQILPLLVIGIGLYF 124

Query: 142 LKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L   +L     +R+        + G   GF  G  G G G F  L  +   G ++ K+TA
Sbjct: 125 LLMPKLGENDRQRRLYGLPFALVAGGCVGFYDGFFGPGAGSFYALAFVTLAGYNLAKSTA 184


>gi|148656216|ref|YP_001276421.1| hypothetical protein RoseRS_2089 [Roseiflexus sp. RS-1]
 gi|148568326|gb|ABQ90471.1| protein of unknown function DUF81 [Roseiflexus sp. RS-1]
          Length = 252

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 92/264 (34%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++    I    F+   +SG+ G+G     VP L       G+  +  +H     SL +  
Sbjct: 1   MERSVFIAAGLFVLSVVSGMLGLGVAFAAVPFL-------GLFMNDLVHEVQPLSLFLNG 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T++ S     R   +  +       V  +   + S M     +S+L   + +  L +  
Sbjct: 54  VTALFSAFGFARSRLVAWREALLLALVTTLFAPLGSWMAQFTAQSWLWGLYLLAVLYLAW 113

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            M + ++                +  +  +    L+G LGVG G      ++  G +  +
Sbjct: 114 RMFQPEKGNRPADSDTVTPRRFSLALLLAIPISILAGLLGVGPGFLLMPTLIIAGFAPKR 173

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A   +A      +F AL+            P  S   +++    I++ +      +  +L
Sbjct: 174 AAGINAVAVTPPSFSALV------------PHLSTMVIDMRLAAILVVVGATGAFIGARL 221

Query: 255 SYM-IGKKYLTIGFSMIMFTTSFV 277
           +   +    L   F++++   +  
Sbjct: 222 TSRFVSGPRLKQVFAVLIVVVTAY 245


>gi|75909989|ref|YP_324285.1| hypothetical protein Ava_3785 [Anabaena variabilis ATCC 29413]
 gi|75703714|gb|ABA23390.1| Protein of unknown function DUF81 [Anabaena variabilis ATCC 29413]
          Length = 278

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 52/288 (18%), Positives = 104/288 (36%), Gaps = 49/288 (17%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++++  L+ + SF +G +  L G+GGG+V+VP+L+  F        + +  A+G SL  +
Sbjct: 3   ILEFSLLVWLGSFSAGFIGALTGLGGGVVIVPLLTSVF-------GVDIRYAVGASLVSV 55

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS+ +   + + G  N+++         I  +  +++ + V    L    AI  +   
Sbjct: 56  IATSLGAASTYIKKGYTNLRLGMFLEVSTTIGAIAGAIIATFVSVKALTIVLAIVLMYSA 115

Query: 139 ILM---------------------LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
            L                      L           P +      G     ++G L    
Sbjct: 116 YLSQRPRLEQVEDDIADPIANYLQLNSTYPTTNGLMPYHVHAVPAGFSIMLVAGVLSGLL 175

Query: 178 GIFTNLLMLF-----YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           GI +    +             +T TS  +  + A  +  V +  G+   GL        
Sbjct: 176 GIGSGGFKVLAMDQAMRLPFKVSTTTSNFMIGVTAAASAGVYLARGYIDPGL-------- 227

Query: 233 NIGAVLIILPISILITP--LATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++  +L +LP + L     +  K       + L I FS+++   +   
Sbjct: 228 SMPVMLGVLPGAFLGARVLIGAK------TQILRIVFSLVLVVMALKM 269



 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 31/81 (38%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +   V+  TS  +I  T+  S   +   G I+  +    +  +     + + ++      
Sbjct: 193 LPFKVSTTTSNFMIGVTAAASAGVYLARGYIDPGLSMPVMLGVLPGAFLGARVLIGAKTQ 252

Query: 125 FLNKAFAIFCLLMGILMLKRD 145
            L   F++  ++M + M+   
Sbjct: 253 ILRIVFSLVLVVMALKMVYNS 273


>gi|163938837|ref|YP_001643721.1| hypothetical protein BcerKBAB4_0834 [Bacillus weihenstephanensis
           KBAB4]
 gi|163861034|gb|ABY42093.1| protein of unknown function DUF81 [Bacillus weihenstephanensis
           KBAB4]
          Length = 255

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 72/203 (35%), Gaps = 14/203 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++I   FL+  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLIILIAFGFLAAFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
               S +   R G +++K       +  I +++ +  +  ++   L     I    + I 
Sbjct: 59  GCATSNIVFYRSGNLDLKSAFKLFPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGAVAIY 118

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFL-----SGALGVGGGIFTNLLMLFYGASIYKA 195
            + +        +     +++              G LG G G F    +LF G    KA
Sbjct: 119 TIFKKDWGSISTYKKLSGRHVIIFTFFIFAIGFYDGFLGPGTGSFLMFSLLFIGYDFLKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              +  ++      ALL+ +Y G
Sbjct: 179 AGNAKLLNLGSNVGALLMFMYVG 201


>gi|331700535|ref|YP_004397494.1| hypothetical protein Lbuc_0143 [Lactobacillus buchneri NRRL
           B-30929]
 gi|329127878|gb|AEB72431.1| protein of unknown function DUF81 [Lactobacillus buchneri NRRL
           B-30929]
          Length = 244

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 9/196 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L+I+  F+ GT+    G GG    + +L+  F L           A  TSL    P+ 
Sbjct: 3   ILLLIIVGFIIGTVVITLGGGGAAFYLGILTTVFGLGPAS-------AAATSLVTSFPSL 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++    + R   I ++I    I       VV SL+  ++              ++G+  L
Sbjct: 56  LIGSYSYFRLHKIKLRIAWRMIIFAVPAVVVGSLISPYIPVKIYLYIIGGILAILGLQTL 115

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +   + + P+ ++  ++G+++G + G  G+ GG      +L  G+ +  A ATS+ V
Sbjct: 116 FSRQK--DHQNPNKWLAPVYGVISGLMVGVGGLSGGGPVVAGLLVMGSDMVTAAATSSLV 173

Query: 203 SALIAFPALLVRIYSG 218
             ++    L+  + +G
Sbjct: 174 LVVMTATGLIFHLSAG 189


>gi|254384464|ref|ZP_04999805.1| hypothetical protein SSAG_04107 [Streptomyces sp. Mg1]
 gi|194343350|gb|EDX24316.1| hypothetical protein SSAG_04107 [Streptomyces sp. Mg1]
          Length = 304

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 82/250 (32%), Gaps = 18/250 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L +VA  + G   G  G GG ++ VP L       G   +     A   SL ++ 
Sbjct: 58  MSVLILALVAGAVIGLALGALGGGGSVLAVPALIYLL---GFSPAA----ATTASLIIVT 110

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  +   H R G +  K    +     +   +       V  + L  AFA+   L  +
Sbjct: 111 ATSATALYAHARDGNVAWKTGALFALAGVVPAFLAGAAAGRVPAALLTGAFAVVAALAAV 170

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            ML+        +            +          GG +    L+   G  + +A  TS
Sbjct: 171 RMLRPTGSEPPERIRPAKAAGSGAGLGAVTGLLGVGGGFLAVPALVGVLGLRMKQAVGTS 230

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             V  + +  AL  R  +G           G +    +      +IL      +L+  I 
Sbjct: 231 LLVITVNSLAALTARTGTG-----------GDLRWEVIAPFTAAAILGAWDGKRLASKIT 279

Query: 260 KKYLTIGFSM 269
            + L   F+ 
Sbjct: 280 GETLQRIFAF 289


>gi|220922670|ref|YP_002497972.1| hypothetical protein Mnod_2711 [Methylobacterium nodulans ORS 2060]
 gi|219947277|gb|ACL57669.1| protein of unknown function DUF81 [Methylobacterium nodulans ORS
           2060]
          Length = 249

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 81/247 (32%), Gaps = 23/247 (9%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT 94
            + G  GVG G+++VPV++           I +  A   ++     T     +   R G 
Sbjct: 15  FMIGCVGVG-GVILVPVMTL-------GCGIPIGTAAAAAMMGYIATGASGTLLFGRSGA 66

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF- 153
           ++ K+            +V +  +   +   +    A      G+  L        R F 
Sbjct: 67  VDRKLSLALCIGAAPGALVGAWAVQKANPIVVQMLIAALAAGAGLNSLSGGARVRARPFA 126

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA-FPALL 212
                  + G   G +S   G GG +    L+++ G  +  A   +  +   +A      
Sbjct: 127 LGATCAGLLGAAVGLISALTGTGGPVILVPLLMWLGVPVLAAVGLAQTIQLPVAGLATAG 186

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             +            ++G V               +    ++++ + +K L    ++I+ 
Sbjct: 187 AYLIGSLDTQIGAQLTVGLV-------------AGSIAGARIAHSVTEKTLHTIAAVILV 233

Query: 273 TTSFVFA 279
           TT  + A
Sbjct: 234 TTGTIVA 240


>gi|330890765|gb|EGH23426.1| hypothetical protein PSYMO_18963 [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 259

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 95/264 (35%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 9   LTTLAILAVVAFIAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     +    +     +++  ++   +LN+   +     G+
Sbjct: 60  FGSATAGFTFYRRKLFHPRQWIHAVVGTAVGAAAGAVIAHYLPAEWLNQMLPVIVFGCGL 119

Query: 140 LMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +L                   +   G+  GF  G  G G G F T   +L Y   + KA
Sbjct: 120 YLLFGGTPKAPLDSNAPIKKKWQLPQGLGLGFYDGVAGPGTGAFWTVSTLLLYPVDLVKA 179

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +  ++ +    AL V I+SG        + +G       L +    +L        +
Sbjct: 180 SGVARSMNFVSNAVALSVFIFSGQ-----VDYIIG-------LSMGLAVMLGAYFGAGTA 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G K++   F  ++   +   A
Sbjct: 228 IKGGAKFIRPVFITVVLGLTVRLA 251


>gi|308184029|ref|YP_003928162.1| hypothetical protein HPSJM_01240 [Helicobacter pylori SJM180]
 gi|308059949|gb|ADO01845.1| hypothetical protein HPSJM_01240 [Helicobacter pylori SJM180]
          Length = 277

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 76/215 (35%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G +++K      F   +  ++ S ++  +D   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLKEGSFAAFGGLMGAILGSFILKIIDDKILMAVFVVVVCYTFIKYAFS 119

Query: 145 DRLYCE-------------------RKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
           +    E                   R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 NNKKPEHFEEMHFDLHANNKTPEKKRPIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|296388666|ref|ZP_06878141.1| putative permease [Pseudomonas aeruginosa PAb1]
          Length = 249

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 79/221 (35%), Gaps = 17/221 (7%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G+   +   +A GT+L ++ P  V++   + +   I+ +          +   + 
Sbjct: 29  AIPVLGVIFGLDQQLAQGTALVMVVPNVVLALWRYHQRNRIDPRQAGVLALTGLLCAFLA 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKR--DRLYCERKFPD---NYVKYIWGMVTGFL 169
           S + + +D + + +AF IF L +   M  R   R       P     ++  +        
Sbjct: 89  SSVAARIDAARMREAFVIFLLALAGYMFWRLFRRPPQGGATPRYGLPWMGVLGLGAGSLG 148

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
                 GG + T +L   +G +   A   +  ++A     AL                  
Sbjct: 149 GLFGVGGGVLATPVLTSVFGLAQVVAQGLALALAAPSTAVALGTYAMH------------ 196

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           G V+    + +    +L      +L++ + ++ L + F   
Sbjct: 197 GHVDWRMGIPLALGGLLSISWGVRLAHALPERSLRMAFCAF 237


>gi|126641710|ref|YP_001084694.1| hypothetical protein A1S_1665 [Acinetobacter baumannii ATCC 17978]
          Length = 267

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 83/257 (32%), Gaps = 46/257 (17%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L   F+       I  H+A+GT L   A +     M H +   I   I+       
Sbjct: 1   MTPILIGLFR-------IEPHIAIGTDLLYAAISKFCGSMVHAKKLNIVWPIVLWLAVGS 53

Query: 108 PITTVVTSLMISHVDKS------FLNKAFAIFCLLMGILMLKRDRL-------------- 147
              +  T+ ++ H           L         L G+ ++ R R+              
Sbjct: 54  IPASFGTAWVLEHYLSQSTHYKAVLTMVLGFMLTLTGVSIIFRTRIEKFFNKFRNKENTQ 113

Query: 148 ----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY--GASIYKATATSAG 201
                   +    Y+  I G++ G       VG G F  + ++       + +   +   
Sbjct: 114 TENEQLAVQNKRTYI-VIMGIILGVFVTLSSVGAGAFGIMALVIMFPNLPMIRIIGSDVV 172

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
            + L+              + GL   S G V+   ++ +L  SI    + T +S  + ++
Sbjct: 173 HAVLLTL------------VAGLGHMSAGNVDFVLLMWLLVGSIPAIIIGTLISSRMPER 220

Query: 262 YLTIGFSMIMFTTSFVF 278
            +     + +F     F
Sbjct: 221 LIRKILGITLFALGVNF 237



 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 49/128 (38%), Gaps = 7/128 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I++   + G    L  VG G   +  L   F       ++ M   +G+ +      ++
Sbjct: 126 TYIVIMGIILGVFVTLSSVGAGAFGIMALVIMF------PNLPMIRIIGSDVVHAVLLTL 179

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-ML 142
           ++ + H   G ++  +L   +       ++ +L+ S + +  + K   I    +G+  M+
Sbjct: 180 VAGLGHMSAGNVDFVLLMWLLVGSIPAIIIGTLISSRMPERLIRKILGITLFALGVNFMV 239

Query: 143 KRDRLYCE 150
              +   +
Sbjct: 240 HPVKAKPK 247


>gi|146304815|ref|YP_001192131.1| hypothetical protein Msed_2067 [Metallosphaera sedula DSM 5348]
 gi|145703065|gb|ABP96207.1| protein of unknown function DUF81 [Metallosphaera sedula DSM 5348]
          Length = 288

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 99/274 (36%), Gaps = 33/274 (12%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM-------------HVAM 71
           L ++A  L G   GL G GG ++ VP+L     L  I                   H+A+
Sbjct: 13  LAVIAGVLVGFSLGLIGGGGSILAVPLLLYFVGLASIPPQYSTSPALEAQYTNFVDHIAL 72

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
           GT+   +   + ++   H R G + +     +         + S +        L   F 
Sbjct: 73  GTTALAVGLNAYINSYMHFRRGNVKLLEGITFTIPGVAGATLGSYVSHITPGKSLLFFFG 132

Query: 132 IFCLLMGILMLKRDRLYCERKFPDNYVKYI-------WGMVTGFLSGALGVGGGIFTNLL 184
           I  + + +LML++      +   +  +  +        G++ GF SG  G+GGG      
Sbjct: 133 ILMIGVALLMLRQRSADRVKTASEGGLARLSLVKVIPTGLLVGFASGFFGIGGGFLIVPG 192

Query: 185 MLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +LF  G  + KA  TS          +  V    G+    LP  S+ ++  G +      
Sbjct: 193 LLFSTGLCMIKAVGTSLIAVGTFGITSATVYSMYGY---VLPVISVLYLVGGILGGYGGA 249

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           S+         +  + +  L   F++I+   +  
Sbjct: 250 SV---------ASRLPRGTLRKAFALIIIAVAIY 274


>gi|325959191|ref|YP_004290657.1| hypothetical protein Metbo_1448 [Methanobacterium sp. AL-21]
 gi|325330623|gb|ADZ09685.1| protein of unknown function DUF81 [Methanobacterium sp. AL-21]
          Length = 273

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 69/196 (35%), Gaps = 34/196 (17%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L+           +   VA+ TSL  + PT+ +    H R G +++K          
Sbjct: 32  VPILTLL--------GVAPQVAVATSLATVLPTTAVGAYSHNRKGNVDVKTGIILGIGGI 83

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR------------------------ 144
           I T++ + + + +  + L K   +  L+  I M++R                        
Sbjct: 84  IGTLIGAYVANLIPPNLLKKGLGLLLLIFAIPMIRRFIGVYKKSKTPKEEHHEIEENLSE 143

Query: 145 --DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
             DR   +   P      ++G+  G L+G  G+ G    +  +   G        T+  V
Sbjct: 144 DPDRETLKLTGPKRIFASLFGVAGGVLAGVFGLSGTPPISAGLYSLGLPTLMVVGTTVFV 203

Query: 203 SALIAFPALLVRIYSG 218
               +   +   ++ G
Sbjct: 204 LVFNSLAGIGGYLFLG 219


>gi|332853863|ref|ZP_08435022.1| hypothetical protein HMPREF0021_02605 [Acinetobacter baumannii
           6013150]
 gi|332865973|ref|ZP_08436741.1| hypothetical protein HMPREF0020_00347 [Acinetobacter baumannii
           6013113]
 gi|332728344|gb|EGJ59723.1| hypothetical protein HMPREF0021_02605 [Acinetobacter baumannii
           6013150]
 gi|332734903|gb|EGJ65990.1| hypothetical protein HMPREF0020_00347 [Acinetobacter baumannii
           6013113]
          Length = 263

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 8/121 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++     ++G L+G+ GVGGG V+VP L K         ++ MH  + TSL +I   S +
Sbjct: 143 VLAGIGIIAGLLTGMLGVGGGFVIVPALRKV-------TNLDMHSIVATSLMIIFLISGI 195

Query: 85  SFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           S + H   G    + I   +        ++    I  +  + + K FA+    + I M+ 
Sbjct: 196 SIVMHIAEGFHYPVAITSAFALACAFGMLLGRRAIRFIPSAIVQKVFALMVFAVAIYMVI 255

Query: 144 R 144
           +
Sbjct: 256 K 256



 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 79/247 (31%), Gaps = 33/247 (13%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP L              +  A    L  +A ++++  +E      +  +       +
Sbjct: 25  LAVPALMT-------SQGWTVAQAAPIGLLAVALSTLIGTIEGLFKKIVRYRAAIWIALI 77

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK-------------- 152
                 +  L+ + +   +L   F++    +G  ++                        
Sbjct: 78  GAPMAHIGILIANAISPVWLMLMFSLVMFTVGYRLISNRVSDFHNPPCQVNPSTGRFIWN 137

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
           F    V    G++ G L+G LGVGGG      +       ++   ATS  +  LI+  ++
Sbjct: 138 FKTGGVLAGIGIIAGLLTGMLGVGGGFVIVPALRKVTNLDMHSIVATSLMIIFLISGISI 197

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           ++ I  G+            V I +   +         L  +    I    +   F++++
Sbjct: 198 VMHIAEGFHYP---------VAITSAFALACA--FGMLLGRRAIRFIPSAIVQKVFALMV 246

Query: 272 FTTSFVF 278
           F  +   
Sbjct: 247 FAVAIYM 253


>gi|152976090|ref|YP_001375607.1| hypothetical protein Bcer98_2368 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152024842|gb|ABS22612.1| protein of unknown function DUF81 [Bacillus cytotoxicus NVH 391-98]
          Length = 257

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 55/270 (20%), Positives = 102/270 (37%), Gaps = 36/270 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             II+  F+ G L G+ G+GG  ++ P L            I   VA+GT L   + T +
Sbjct: 3   ISIIMMGFIIGGLVGVTGIGGAALLTPFLLTL--------GISPSVAVGTDLVYNSITKM 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIFCLLM 137
               +H +  TIN +++K        + V+  + I  +       +  +        ++ 
Sbjct: 55  FGISQHWKQKTINFRLVKYLAVGSIPSAVIAVVTIHVLPIVHYNREGIIKYILGYVLIIA 114

Query: 138 GILMLKRDRLYCERKFP---------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF- 187
            I +  +   Y E +              +  I G + GF+ G   VG G    + M++ 
Sbjct: 115 AISIFIKIFFYNESRQNYFQKQTMKQKKNLTVIIGAILGFIVGLTSVGSGSLFAIAMIYL 174

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           Y     +   T    + L+   A ++ +            +LG V+   ++ +L  SI  
Sbjct: 175 YRLEPSELVGTDITHAFLLVTVASILNM------------NLGNVDYLLLIHLLIGSIPG 222

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             L +K S  I  K L I  ++I+  +   
Sbjct: 223 VILGSKFSTKIPVKLLQIFLAIIIGVSGLK 252


>gi|325122135|gb|ADY81658.1| hypothetical protein BDGL_001072 [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 263

 Score = 55.8 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 8/121 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++     ++G L+G+ GVGGG V+VP L K         ++ MH  + TSL +I   S M
Sbjct: 143 VLASIGIIAGLLTGMLGVGGGFVIVPALRKV-------TNLDMHSIVATSLMIIFLISGM 195

Query: 85  SFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           S + H   G    + I   +     +  ++    I  +  + + K FA+    + I M+ 
Sbjct: 196 SIVMHIAEGFHYPVGITSAFALACAVGMLLGRRAIRFIPSAIVQKVFALMVFAVAIYMVI 255

Query: 144 R 144
           +
Sbjct: 256 K 256



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 82/247 (33%), Gaps = 33/247 (13%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP L              +  A    L  +A ++++  +E      +  +       +
Sbjct: 25  LAVPALMT-------SQGWSVAQAAPIGLLAVALSTLIGTIEGLFKKIVRYRAAIWIALI 77

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK-------------- 152
                 +  L+ + +   +L   F++    +G  ++                        
Sbjct: 78  GAPMAHIGILIANTISPIWLMLMFSLVMFTVGYRLISNRVSDFHNPPCQVNPSTGRFIWN 137

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
           F    V    G++ G L+G LGVGGG      +       ++   ATS  +  LI+  ++
Sbjct: 138 FKTGSVLASIGIIAGLLTGMLGVGGGFVIVPALRKVTNLDMHSIVATSLMIIFLISGMSI 197

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           ++ I  G+         +G  +  A+   + +      L  +    I    +   F++++
Sbjct: 198 VMHIAEGFHYP------VGITSAFALACAVGM-----LLGRRAIRFIPSAIVQKVFALMV 246

Query: 272 FTTSFVF 278
           F  +   
Sbjct: 247 FAVAIYM 253


>gi|226327938|ref|ZP_03803456.1| hypothetical protein PROPEN_01819 [Proteus penneri ATCC 35198]
 gi|225203642|gb|EEG85996.1| hypothetical protein PROPEN_01819 [Proteus penneri ATCC 35198]
          Length = 207

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 80/201 (39%), Gaps = 13/201 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              L+ + + ++G +  + G GGGL+ +P L            I    A+ T+       
Sbjct: 9   IYLLLFLVALIAGFIDSIAG-GGGLITIPALL--------SAGISPVQALATNKLQSVGG 59

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + +   R   I+++  +  I +  I  V  ++++  ++   L +A  I  + +G   
Sbjct: 60  SFSATLYFIRRKVIDLRAQRFAILMTFIGAVSGAMLVQFINPEILKQALPILTIAIGFYF 119

Query: 142 LKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           L    +  +             I G   GF  G  G G G F  L  ++  G ++ KATA
Sbjct: 120 LLTPSIGAQDSKQRIGYYTFGAILGGGVGFYDGIFGPGTGSFFALGYVMLLGYNLSKATA 179

Query: 198 TSAGVSALIAFPALLVRIYSG 218
            +  ++    F +LL  +  G
Sbjct: 180 HAKLLNFTSNFGSLLFLLLVG 200


>gi|158512112|gb|ABW69077.1| hypothetical protein [Edwardsiella tarda]
          Length = 280

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 90/238 (37%), Gaps = 25/238 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + ++   +  +G +  + G GGGL+ VP L       G+  +     A+ T+      
Sbjct: 23  ELLGVLFCVALFAGFIDAIAG-GGGLLTVPALLAV----GLPPAQ----ALATNKLQSVG 73

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R   +N+   K  I +  +     +L++  +    L +      + +G+ 
Sbjct: 74  GSFSSSLYFIRRRVVNLAEQKWVILLTFLAAAAGALLVQRLQAEILRQLLPFLVIGVGLY 133

Query: 141 MLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L    L      R+        + G   GF  G  G G G F  L  ++  G S+ +AT
Sbjct: 134 FLLTPSLGATEGTRRVGMPLFAVLGGASVGFYDGFFGPGAGSFYALGYVMLLGLSLPQAT 193

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A +  ++      +LL+ I  G        WS+G       L +L    +   +  ++
Sbjct: 194 AHAKVLNFTSNAASLLLFIIGG-----NVVWSVG-------LCMLVGQAIGARVGARM 239


>gi|119963633|ref|YP_947321.1| integral membrane protein [Arthrobacter aurescens TC1]
 gi|119950492|gb|ABM09403.1| putative integral membrane protein [Arthrobacter aurescens TC1]
          Length = 265

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 74/205 (36%), Gaps = 14/205 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + LI+VA F +G +  + G GGGL+ +P L            I    A+ T+     
Sbjct: 10  LTTLILIVVAGFAAGWVDAVVG-GGGLIQLPALLLV-------PGITPVQALATNKMGSI 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  S + + R    ++K       +    +   +++ + +  S       +  + + I
Sbjct: 62  FGTTTSAVTYYRRVGPDLKTAVPMAVIALAGSFGGAILAASLPASVFKPIIVLALIAVAI 121

Query: 140 LMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIY 193
               R                  V  + G V GF  G +G G G      L+   G +  
Sbjct: 122 FTALRPGAGELTALRHDGHKHYVVACLIGAVIGFYDGLIGPGTGSFLVIALVSAMGYAFL 181

Query: 194 KATATSAGVSALIAFPALLVRIYSG 218
           +A+A +  V+      AL+  +  G
Sbjct: 182 EASAKAKIVNMATNAGALIFFLPHG 206


>gi|325295659|ref|YP_004282173.1| hypothetical protein Dester_1486 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325066107|gb|ADY74114.1| protein of unknown function DUF81 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 246

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 96/251 (38%), Gaps = 20/251 (7%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + SF++  + GL G+G  + ++P+L            I   +A  T L     ++  + +
Sbjct: 11  LVSFITSFIFGLGGLGSAVALIPILVFL--------GIPFSIARPTGLFTNFVSTFSATL 62

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            + + G ++ K+         +   + +     V +  +  AF +F    G  M+   + 
Sbjct: 63  HNLKKGVVDFKLALPIAITAILAAPLGAYFSHFVSEKVVGIAFTLFLFFAGT-MIYIPKK 121

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
              ++     +  + G+V GF SG LGVGGG   + +++  G +  K    +A   +L +
Sbjct: 122 ELFKEKSSITLPVLTGLVAGFTSGFLGVGGGGLISPILIVAGFNPKKIATVTAFAVSLSS 181

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           F   L  +  G        WS+    + A         L   +  K    +  ++L    
Sbjct: 182 FTGFLTYLKMGS-----VDWSI---TLLAAFPAGIAGYLAAFIGHK---YLKPQHLKKIL 230

Query: 268 SMIMFTTSFVF 278
            +I F     F
Sbjct: 231 GVIFFLLGIKF 241


>gi|218708499|ref|YP_002416120.1| hypothetical protein VS_0463 [Vibrio splendidus LGP32]
 gi|218321518|emb|CAV17470.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 259

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 84/210 (40%), Gaps = 16/210 (7%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  +     R+G +++K ++  IF   I + + + ++ H+D S L   
Sbjct: 46  ALATNKLQSSFGSFSASWYFVRNGIVSIKEMRLAIFCTFIGSAIGAELVQHIDASLLTSV 105

Query: 130 FAIFCLLMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             +  + + +  L   +      ++K  +       G   GF  G  G G G IFT   +
Sbjct: 106 IPLLLIAISLYFLLAPQTRASEGKQKISEAMFALCIGGGVGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                S+  ATA +  ++      AL+  I +G     LP W LG       L++     
Sbjct: 166 AIGHFSLVDATARTKVLNFTSNIAALIFFILAG-----LPIWELG-------LVMAVGGF 213

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +   L  K+    G+K++     ++    +
Sbjct: 214 MGAQLGAKVVVTKGQKWIRPLVIVMSMLMA 243


>gi|317180031|dbj|BAJ57817.1| hypothetical protein HPF32_0235 [Helicobacter pylori F32]
          Length = 277

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 76/215 (35%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G +++K      F   +  ++ S ++  +D   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLKEGSFAAFGGLMGAILGSFILKIIDDKILMAVFVVVVCYTFIKYAFS 119

Query: 145 DRLYCE-------------------RKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
           +    E                   R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 NNKKPEHFEEMHFDLHANNKTPEKKRPIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|239501816|ref|ZP_04661126.1| permease [Acinetobacter baumannii AB900]
          Length = 263

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 8/121 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++     ++G L+G+ GVGGG V+VP L K         ++ MH  + TSL +I   S M
Sbjct: 143 VLASIGIIAGLLTGMLGVGGGFVIVPALRKV-------TNLDMHSIVATSLMIIFLISGM 195

Query: 85  SFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           S + H   G    + I   +        ++    I  +  + + K FA+    + I M+ 
Sbjct: 196 SIVMHIAEGFHYPVAITSAFALACAFGMLLGRRAIRFIPSAIVQKVFALMVFAVAIYMVI 255

Query: 144 R 144
           +
Sbjct: 256 K 256



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 79/247 (31%), Gaps = 33/247 (13%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP L              +  A    L  +A ++++  +E      +  +       +
Sbjct: 25  LAVPALMT-------SQGWSVAQAAPIGLLAVALSTLIGTIEGLFKKIVRYRAAIWIALI 77

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK-------------- 152
                 +  L+ + +   +L   F++    +G  ++                        
Sbjct: 78  GAPMAHIGILIANTISPIWLMLMFSLVMFTVGYRLISNRVSDFHNPPCQVNPSTGRFIWN 137

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
           F    V    G++ G L+G LGVGGG      +       ++   ATS  +  LI+  ++
Sbjct: 138 FKTGGVLASIGIIAGLLTGMLGVGGGFVIVPALRKVTNLDMHSIVATSLMIIFLISGMSI 197

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           ++ I  G+            V I +   +         L  +    I    +   F++++
Sbjct: 198 VMHIAEGFHYP---------VAITSAFALACA--FGMLLGRRAIRFIPSAIVQKVFALMV 246

Query: 272 FTTSFVF 278
           F  +   
Sbjct: 247 FAVAIYM 253


>gi|308061578|gb|ADO03466.1| hypothetical protein HPCU_01440 [Helicobacter pylori Cuz20]
          Length = 277

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 76/215 (35%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G +++K      F   +  ++ S ++  +D   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLKEGSFAAFGGLMGAILGSFILKIIDDKILMAVFVVVVCYTFIKYAFS 119

Query: 145 DRLYCE-------------------RKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
           +    E                   R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 NNKKPEHFEEMHFDLHANNKTPEKKRPIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|218887074|ref|YP_002436395.1| hypothetical protein DvMF_1984 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758028|gb|ACL08927.1| protein of unknown function DUF81 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 415

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 46/295 (15%), Positives = 106/295 (35%), Gaps = 66/295 (22%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              + I     +G ++G  G GGG ++ P L        +   +   +A+GT L  I   
Sbjct: 73  IFLVSIAVGLAAGLITGCIGAGGGFIITPAL--------MAAGVKGILAVGTDLFHIFAK 124

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS-------HVDKSFLNKAFAIFC 134
           ++M    H++ G +++K+   ++      T +   +          + + F++  +A+  
Sbjct: 125 AIMGTTVHKKLGNVSVKLAIAFLVGSGAGTFIGGAINKGLYNKDPLLSEMFISSIYAVLL 184

Query: 135 LLMGILML---------------------------------------KRDRLYCERKFPD 155
             +G   L                                         + L    +   
Sbjct: 185 GFLGFYALFDFIKSSRSGGGGDAHGGSSGATGLSVKLQAMNVPPMITFDEDLVPGGRRIS 244

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            ++    G+V G L+  +GVGGG  T  + ++             GVS++      +++I
Sbjct: 245 GWIVAAGGVVVGILAAIMGVGGGFITFPMFVYI-----------FGVSSMTTVGTDILQI 293

Query: 216 YSGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
               GL  +  +++ G+V     + +L  S+L   +    + ++   ++   ++M
Sbjct: 294 IFTAGLGAIAQYAIYGYVFYTLAMGMLIGSLLGIQVGALTTKVVKGIHIRGFYAM 348



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 42/118 (35%), Gaps = 8/118 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++     + G L+ + GVGGG +  P+    F        +     +GT +  I  T+ 
Sbjct: 246 WIVAAGGVVVGILAAIMGVGGGFITFPMFVYIF-------GVSSMTTVGTDILQIIFTAG 298

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +  +     +G +   +    +    +   V +L    V    +   +A+  +   I 
Sbjct: 299 LGAIAQYAIYGYVFYTLAMGMLIGSLLGIQVGALTTKVVKGIHIRGFYAMSIIAGFIN 356


>gi|149187038|ref|ZP_01865345.1| membrane protein [Erythrobacter sp. SD-21]
 gi|148829327|gb|EDL47771.1| membrane protein [Erythrobacter sp. SD-21]
          Length = 301

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 8/119 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +     G L+ L GVGGG ++VP +            +  +V +GTSL  I   ++ + 
Sbjct: 176 AIVGVAVGILTMLMGVGGGFILVPAMLYIL-------GMSANVVVGTSLYNILFVTIATT 228

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + H      +++ ++   +          S +        L    A   L +   ML  
Sbjct: 229 IMHSLTTRAVDIVLVGLLLIGSVTGAQFGSQLAVRAKPEVLRLVLAAIVLAIAFRMLLG 287



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 58/289 (20%), Positives = 100/289 (34%), Gaps = 53/289 (18%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I+    L+G LSGLFGVGGG +  P+L       GI  +    VA  ++   +   SV
Sbjct: 15  LWIVALGALTGVLSGLFGVGGGFLTTPLLIF----YGIPPT----VAAASASTQVTGASV 66

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMG 138
              + H R   ++ ++    +    I   + +L+             +N  + +    +G
Sbjct: 67  SGVLAHSRRKGVDYRMGTVMVGGGIIGAGIGALLFRFFRSIGQIDVVINSLYVVLLGSIG 126

Query: 139 ILMLK----------------------------RDRLYCERKFPDNYVKYIWGMVTGFLS 170
           ILM K                            R R Y    +       I G+  G L+
Sbjct: 127 ILMAKESLQLLRGTGGKQAARRRHHPLVANLPWRWRFYGSGLYISPLAPAIVGVAVGILT 186

Query: 171 GALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
             +GVGGG      ML+  G S      TS      +     ++   +            
Sbjct: 187 MLMGVGGGFILVPAMLYILGMSANVVVGTSLYNILFVTIATTIMHSLTTRA--------- 237

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             V+I  V ++L  S+      ++L+     + L +  + I+   +F  
Sbjct: 238 --VDIVLVGLLLIGSVTGAQFGSQLAVRAKPEVLRLVLAAIVLAIAFRM 284


>gi|188527031|ref|YP_001909718.1| hypothetical protein HPSH_01170 [Helicobacter pylori Shi470]
 gi|188143271|gb|ACD47688.1| hypothetical protein HPSH_01170 [Helicobacter pylori Shi470]
 gi|308063087|gb|ADO04974.1| hypothetical protein HPSAT_01120 [Helicobacter pylori Sat464]
          Length = 277

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 76/215 (35%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G +++K      F   +  ++ S ++  +D   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLKEGSFAAFGGLMGAILGSFILKIIDDKILMAVFVVVVCYTFIKYAFS 119

Query: 145 DRLYCE-------------------RKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
           +    E                   R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 NNKKPEHFEEMHFDLHANNKTPDKKRPIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|71066392|ref|YP_265119.1| hypothetical protein Psyc_1837 [Psychrobacter arcticus 273-4]
 gi|71039377|gb|AAZ19685.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
          Length = 251

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 83/209 (39%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +     ++ I ++   + L+G +  + G GGGL+ +P +  A        +I   + +GT
Sbjct: 1   MDVSLSIEVILMLTAVAALAGFIDAIAG-GGGLLTIPAMLLA--------NIPPVLTLGT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +    A  ++ + +   + G +  K +K  I    I ++  S+ +       L K     
Sbjct: 52  NKLQAASGALAASITMIKKGIVKPKNIKTAIIAAFIGSIFGSIAVQLSPPDLLEKLIPFL 111

Query: 134 CLLMGILMLKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYG 189
              +GI  L   +L      P       + I   + GF  G +G G G+F  L  +   G
Sbjct: 112 IAAIGIYTLFAPKLGEVEAAPRISEGAWQKIAAPLIGFYDGYMGPGTGMFFALGNVALRG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             I +AT  +  ++      +L+  I  G
Sbjct: 172 RKIIEATGAAKVLNLSTNIGSLIFFILGG 200


>gi|255320408|ref|ZP_05361592.1| permease [Acinetobacter radioresistens SK82]
 gi|255302603|gb|EET81836.1| permease [Acinetobacter radioresistens SK82]
          Length = 253

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 92/256 (35%), Gaps = 25/256 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+ + +F  G +    G GGGLV +P L  A           +    GT+   +   +
Sbjct: 5   LILLGLFAFCGGLIDAAVG-GGGLVQLPALIHAL------PQYSLATVFGTNKIAVLAGT 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   + +   I  K++   +        + ++ +S + K  +        +L+ I   
Sbjct: 58  FSSIFTYIKRVKIVWKLIFPTMISAFTFAFLGAMSVSLIPKELMRYIVFCLLILIAIYTF 117

Query: 143 KRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKAT 196
            +  L           K      ++G + GF  G  G G G F   L +  +      A+
Sbjct: 118 IKKDLGKTHTELQYGKKEIGLGILFGGLIGFYDGIFGPGSGSFLIFLFVRIFSFDFLNAS 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A++  V+      +LL  I +            G V       +   ++L + + T L+ 
Sbjct: 178 ASAKLVNLGTFTASLLFFIPA------------GHVLWKVGTFVGICNVLGSLVGTILAL 225

Query: 257 MIGKKYLTIGFSMIMF 272
             G  ++ I F +++ 
Sbjct: 226 RYGSGFIRIFFLVLLI 241



 Score = 35.4 bits (81), Expect = 9.5,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L I+   L G   G+FG G G  ++ +  + F    ++       A  ++  V   T 
Sbjct: 136 IGLGILFGGLIGFYDGIFGPGSGSFLIFLFVRIFSFDFLN-------ASASAKLVNLGTF 188

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             S +     G +  K+         + ++V +++       F+   F +  + +   M
Sbjct: 189 TASLLFFIPAGHVLWKVGTFVGICNVLGSLVGTILALRYGSGFIRIFFLVLLIFLIGRM 247


>gi|326793885|ref|YP_004311705.1| hypothetical protein Marme_0575 [Marinomonas mediterranea MMB-1]
 gi|326544649|gb|ADZ89869.1| protein of unknown function DUF81 [Marinomonas mediterranea MMB-1]
          Length = 257

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 90/219 (41%), Gaps = 14/219 (6%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  L  +  +     + + +FL+G +  + G GGGL+ VPVL  A         +    A
Sbjct: 1   MEGLFAEWSIWLYLGLFLTAFLAGIVDTIAG-GGGLITVPVLLAA--------GLSPAEA 51

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           + T+       ++ +     +   +++  +   I +  I ++  +L++S++D   L K  
Sbjct: 52  LATNKLQGCAGTLSASYHFIKTRQVDINTMWFAITMTAIGSIAGTLLVSYLDSGVLIKLI 111

Query: 131 AIFCLLMGILMLKRDRLYC----ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
            I  + +        ++      +          + G   GF  G +G G G  F+   +
Sbjct: 112 PIILIAVAAFFYWLPKVQPVIASKVSLNSGQFALMVGTGIGFYDGLIGPGTGAFFSTAYL 171

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            F GA++  ATA +  ++A     +L +   +G  + GL
Sbjct: 172 CFMGATLISATAHTKVLNATSNVSSLAIFSITGHIIWGL 210


>gi|261839083|gb|ACX98848.1| hypothetical protein HPKB_0235 [Helicobacter pylori 52]
 gi|332673068|gb|AEE69885.1| integral membrane protein [Helicobacter pylori 83]
          Length = 277

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 76/215 (35%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G +++K      F   +  ++ S ++  +D   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLKEGSFAAFGGLMGAILGSFILKIIDDKILMAVFVVVVCYTFIKYAFS 119

Query: 145 DRLYCE-------------------RKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
           +    E                   R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 NNKKPEHFEEMHFDLHANNKTPEKKRPIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|169796015|ref|YP_001713808.1| hypothetical protein ABAYE1938 [Acinetobacter baumannii AYE]
 gi|213157251|ref|YP_002319296.1| hypothetical protein AB57_1938 [Acinetobacter baumannii AB0057]
 gi|215483472|ref|YP_002325689.1| hypothetical protein ABBFA_001786 [Acinetobacter baumannii
           AB307-0294]
 gi|301344725|ref|ZP_07225466.1| hypothetical protein AbauAB0_00750 [Acinetobacter baumannii AB056]
 gi|301510298|ref|ZP_07235535.1| hypothetical protein AbauAB05_01944 [Acinetobacter baumannii AB058]
 gi|301596399|ref|ZP_07241407.1| hypothetical protein AbauAB059_11310 [Acinetobacter baumannii
           AB059]
 gi|169148942|emb|CAM86817.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter baumannii AYE]
 gi|213056411|gb|ACJ41313.1| hypothetical protein AB57_1938 [Acinetobacter baumannii AB0057]
 gi|213988273|gb|ACJ58572.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
          Length = 263

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 8/121 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++     ++G L+G+ GVGGG V+VP L K         ++ MH  + TSL +I   S M
Sbjct: 143 VLASIGIIAGLLTGMLGVGGGFVIVPALRKV-------TNLDMHSIVATSLMIIFLISGM 195

Query: 85  SFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           S + H   G    + I   +        ++    I  +  + + K FA+    + I M+ 
Sbjct: 196 SIVMHIAEGFQYPVAITSAFALACAFGMLLGRRAIRFIPSAIVQKVFALMVFAVAIYMVI 255

Query: 144 R 144
           +
Sbjct: 256 K 256



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 79/247 (31%), Gaps = 33/247 (13%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP L              +  A    L  +A ++++  +E      +  +       +
Sbjct: 25  LAVPALMT-------SQGWSVAQAAPIGLLAVALSTLIGTIEGLFKKIVRYRAAIWIALI 77

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK-------------- 152
                 +  L+ + +   +L   F++    +G  ++                        
Sbjct: 78  GTPMAHIGILIANAISPVWLMLMFSLVMFTVGYRLISNRVSDFHNPPCQVNPSTGRFIWN 137

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
           F    V    G++ G L+G LGVGGG      +       ++   ATS  +  LI+  ++
Sbjct: 138 FKTGGVLASIGIIAGLLTGMLGVGGGFVIVPALRKVTNLDMHSIVATSLMIIFLISGMSI 197

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           ++ I  G+            V I +   +         L  +    I    +   F++++
Sbjct: 198 VMHIAEGFQYP---------VAITSAFALACA--FGMLLGRRAIRFIPSAIVQKVFALMV 246

Query: 272 FTTSFVF 278
           F  +   
Sbjct: 247 FAVAIYM 253


>gi|83719558|ref|YP_442801.1| hypothetical protein BTH_I2280 [Burkholderia thailandensis E264]
 gi|257139013|ref|ZP_05587275.1| hypothetical protein BthaA_07360 [Burkholderia thailandensis E264]
 gi|83653383|gb|ABC37446.1| membrane protein, putative [Burkholderia thailandensis E264]
          Length = 268

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 97/276 (35%), Gaps = 40/276 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V   + G + GL G GGG++ VP L        +     M  A   +L  +A ++
Sbjct: 1   MLISLVLGSIVGAVLGLTGAGGGILAVPALV-------VGMGWPMQQATPVALVAVAGSA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +E  R G +  +            T +   +   + +  L   FA+  +++ + +L
Sbjct: 54  ALGALEGFRRGLVRYRAALLMAAAGVPLTTLGVRLAHVLPQRVLLALFALVMMIVAVRLL 113

Query: 143 KRDRLYCERKFPDNY----------VKYIWGMVTGFLSGALGVGGG------------IF 180
           ++   +  R+   +            + +W    G    + G   G            + 
Sbjct: 114 RQALRHAAREPARSPLCVGRIDPDTGRLVWSWAAGIALASTGALTGLMTGLLGVGGGFVI 173

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             +L  F   +++   ATS  V AL+    ++  I SG               +   L  
Sbjct: 174 VPMLRKFTNVTMHGIVATSLMVIALVGTGGVIATIVSGTPAP-----------LDVTLWF 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              + L       +S  +  +++ +GF+  +   + 
Sbjct: 223 TVTTALGMAAGRWVSRYLSARHVQLGFAAALVCVAA 258



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G + G + G  G GGGI     L++  G  + +A          +A  A+    
Sbjct: 2   LISLVLGSIVGAVLGLTGAGGGILAVPALVVGMGWPMQQA--------TPVALVAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +  G V   A L++    + +T L  +L++++ ++ L   F+++M   +
Sbjct: 54  ALG----ALEGFRRGLVRYRAALLMAAAGVPLTTLGVRLAHVLPQRVLLALFALVMMIVA 109

Query: 276 FV 277
             
Sbjct: 110 VR 111


>gi|262279029|ref|ZP_06056814.1| permease [Acinetobacter calcoaceticus RUH2202]
 gi|262259380|gb|EEY78113.1| permease [Acinetobacter calcoaceticus RUH2202]
          Length = 263

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 8/121 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++     ++G L+G+ GVGGG V+VP L K         ++ MH  + TSL +I   S M
Sbjct: 143 VLASIGIIAGLLTGMLGVGGGFVIVPALRKV-------TNLDMHSIVATSLMIIFLISGM 195

Query: 85  SFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           S + H   G    + I   +        ++    I  +  + + K FA+    + I M+ 
Sbjct: 196 SIVMHIAEGFHYPVGITSAFALACAFGMLLGRRAIRFIPAAIVQKVFALMVFAVAIYMVV 255

Query: 144 R 144
           +
Sbjct: 256 K 256



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 77/247 (31%), Gaps = 33/247 (13%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP L              +  A    L  +A ++++  +E      +  +       +
Sbjct: 25  LAVPALMS-------SQGWSVAQAAPIGLLAVALSTLIGTIEGLFKKMVRYRAAIWIALI 77

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK-------------- 152
                 +  L+ + +   +L   F++    +G  ++                        
Sbjct: 78  GAPMAHIGILIANTISPVWLMLMFSLVMFTVGYRLISNRVSDFHNPPCQVNPSTGRFIWN 137

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
           F    V    G++ G L+G LGVGGG      +       ++   ATS  +  LI+  ++
Sbjct: 138 FKTGSVLASIGIIAGLLTGMLGVGGGFVIVPALRKVTNLDMHSIVATSLMIIFLISGMSI 197

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           ++ I  G+              +G              L  +    I    +   F++++
Sbjct: 198 VMHIAEGFHYP-----------VGITSAFALACAFGMLLGRRAIRFIPAAIVQKVFALMV 246

Query: 272 FTTSFVF 278
           F  +   
Sbjct: 247 FAVAIYM 253


>gi|170727405|ref|YP_001761431.1| hypothetical protein Swoo_3065 [Shewanella woodyi ATCC 51908]
 gi|169812752|gb|ACA87336.1| protein of unknown function DUF81 [Shewanella woodyi ATCC 51908]
          Length = 259

 Score = 55.8 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 78/209 (37%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  +   + + ++   + L+G +  + G GGGL+ +P L  A         +    A+ T
Sbjct: 1   MGFELTYELVAILFAVAVLAGFIDSIAG-GGGLLTIPALMWA--------GLPPTAALAT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  + +   R G + +  +K  I    I + + ++ +  +D +FL       
Sbjct: 52  NKLQACGGSFFASLYFIRKGMVKLSDMKLAILCAFIGSAIGTIAVQQIDTAFLEVLLPFL 111

Query: 134 CLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
            L +G   L   ++  + K   F          +  G   G  G G G  F    +   G
Sbjct: 112 MLAIGGYFLFSKKISEDDKHQVFGPGLFALTAALGVGLYDGFFGPGTGSFFALAFVSLAG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             + KATA +  ++      +L+     G
Sbjct: 172 YGLAKATAHAKVLNFSTNIASLIFFALGG 200


>gi|293608137|ref|ZP_06690440.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828710|gb|EFF87072.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 263

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 8/121 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++     ++G L+G+ GVGGG V+VP L K         ++ MH  + TSL +I   S M
Sbjct: 143 VLAGIGIIAGLLTGMLGVGGGFVIVPALRKV-------TNLDMHSIVATSLMIIFLISGM 195

Query: 85  SFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           S + H   G    + I   +     +  ++    I  +  + + K FA+    + I M+ 
Sbjct: 196 SIVMHIAEGFHYPVGITSAFALACAVGMLLGRRAIRFIPSAIVQKVFALMVFAVAIYMVI 255

Query: 144 R 144
           +
Sbjct: 256 K 256



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 82/247 (33%), Gaps = 33/247 (13%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP L              +  A    L  +A ++++  +E      +  +       +
Sbjct: 25  LAVPALMT-------SQGWSVAQAAPIGLLAVALSTLIGTIEGLFKKIVRYRAAIWIALI 77

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK-------------- 152
                 +  L+ + +   +L   F++    +G  ++                        
Sbjct: 78  GAPMAHIGILIANAISPVWLMLMFSLVMFTVGYRLISNRVSDFHNPPCQVNPSTGRFIWN 137

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
           F    V    G++ G L+G LGVGGG      +       ++   ATS  +  LI+  ++
Sbjct: 138 FKTGGVLAGIGIIAGLLTGMLGVGGGFVIVPALRKVTNLDMHSIVATSLMIIFLISGMSI 197

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           ++ I  G+         +G  +  A+   + +      L  +    I    +   F++++
Sbjct: 198 VMHIAEGFHYP------VGITSAFALACAVGM-----LLGRRAIRFIPSAIVQKVFALMV 246

Query: 272 FTTSFVF 278
           F  +   
Sbjct: 247 FAVAIYM 253


>gi|269120710|ref|YP_003308887.1| hypothetical protein Sterm_2102 [Sebaldella termitidis ATCC 33386]
 gi|268614588|gb|ACZ08956.1| protein of unknown function DUF81 [Sebaldella termitidis ATCC
           33386]
          Length = 246

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 85/197 (43%), Gaps = 16/197 (8%)

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVL--PITTVVTSLMISHVDKSFLNKAFAIF 133
            V+  +  M  +       + + I K  +  +   I   +   ++ HV+++F++ A+   
Sbjct: 44  AVVVLSMAMVTLATFIMNGVKINIRKILLLGIGSVIGGFLGGTLLKHVNENFIDIAYIFM 103

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
            LL+   ++ R ++  E    +   +   G++TG LSG  G+GGG F    L++F+G   
Sbjct: 104 LLLVLFSVVFRKKI-PEINIKNPLAEITIGVLTGGLSGLFGIGGGPFQVTALIVFFGMDP 162

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +A   S  ++ L    +L     +G+    L             L ++P +++      
Sbjct: 163 REAAVDSIFITFLTTLSSLTKYTINGYMDFSL------------ALYMIPAAVIGGYTGG 210

Query: 253 KLSYMIGKKYLTIGFSM 269
           K++  I  K +++ F +
Sbjct: 211 KINRKISSKKVSLIFVI 227



 Score = 43.9 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 7/110 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I    L+G LSGLFG+GGG   V  L   F   G+D       A   S+ +   T++ S 
Sbjct: 129 ITIGVLTGGLSGLFGIGGGPFQVTALIVFF---GMDP----REAAVDSIFITFLTTLSSL 181

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            ++  +G ++  +    I    I       +   +    ++  F I  L 
Sbjct: 182 TKYTINGYMDFSLALYMIPAAVIGGYTGGKINRKISSKKVSLIFVISILF 231


>gi|319948206|ref|ZP_08022365.1| putative permease [Dietzia cinnamea P4]
 gi|319438141|gb|EFV93102.1| putative permease [Dietzia cinnamea P4]
          Length = 308

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 98/266 (36%), Gaps = 37/266 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++V S + G + GL G+GGG +M P L       GI  +     A+   L V A   V+ 
Sbjct: 13  LLVVSAVIGVVIGLTGMGGGALMTPALILV----GIPPTA----AVANDLVVNAVNKVVG 64

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS----FLNKAFAIFCLLMG--- 138
              H RHG  N+KI    I     T  + + ++  +        L KA     ++     
Sbjct: 65  AGVHWRHGKPNLKIAFWLIIGSVPTAYLGAWLVHAIGAEDVQGMLKKAIGATLIVASTAY 124

Query: 139 -----ILMLKRDRLYCERKFPDNYVKY-IWGMVTGFLSGALGVGGGI--FTNLLMLFYGA 190
                  M  R R   +   P   V   + G++ G + G   VG G      +++L+   
Sbjct: 125 FLRAFFEMSGRIRTGDDPDPPVKPVLTLLVGVIGGLMVGITSVGSGTVIMMCIMLLYPTL 184

Query: 191 SIYKATATSAGVSALIAFPALLVR-IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
           +  +   T    +  +   A +   + +G   + L P  +G               + T 
Sbjct: 185 AALRLVGTDLVQAVPLVIAAAIGHVMVTGVDWDLLVPLLIG-------------GAIGTF 231

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTS 275
             ++ +  +    +  G ++++  T+
Sbjct: 232 FGSRFAGRVPGGLIRRGITIVLAVTA 257



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 42/119 (35%), Gaps = 6/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + G + G+  VG G V++  +   +       ++     +GT L    P  +
Sbjct: 149 VLTLLVGVIGGLMVGITSVGSGTVIMMCIMLLY------PTLAALRLVGTDLVQAVPLVI 202

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            + + H     ++  +L   +    I T   S     V    + +   I   +    ML
Sbjct: 203 AAAIGHVMVTGVDWDLLVPLLIGGAIGTFFGSRFAGRVPGGLIRRGITIVLAVTATAML 261



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 38/125 (30%), Gaps = 16/125 (12%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
           D+    +   V G + G  G+GGG      ++  G     A A    V+A+         
Sbjct: 9   DSLGLLVVSAVIGVVIGLTGMGGGALMTPALILVGIPPTAAVANDLVVNAVNKVVGA--- 65

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK----YLTIGFSMI 270
                       W  G  N+     ++  S+    L   L + IG +     L       
Sbjct: 66  ---------GVHWRHGKPNLKIAFWLIIGSVPTAYLGAWLVHAIGAEDVQGMLKKAIGAT 116

Query: 271 MFTTS 275
           +   S
Sbjct: 117 LIVAS 121


>gi|77165754|ref|YP_344279.1| hypothetical protein Noc_2291 [Nitrosococcus oceani ATCC 19707]
 gi|254434301|ref|ZP_05047809.1| conserved domain protein, putative [Nitrosococcus oceani AFC27]
 gi|76884068|gb|ABA58749.1| Protein of unknown function DUF81 [Nitrosococcus oceani ATCC 19707]
 gi|207090634|gb|EDZ67905.1| conserved domain protein, putative [Nitrosococcus oceani AFC27]
          Length = 266

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 99/279 (35%), Gaps = 45/279 (16%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  + G + GL GVGGG +M P+L   F   GI        A+GT L   A T +  
Sbjct: 5   YILAGLVVGFMVGLTGVGGGSLMTPLLIFGF---GIPPL----TAVGTDLLFAALTKMGG 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK------AFAIFCLLMGI 139
              H RH TI  +++         +T++   ++       L        A     +L  +
Sbjct: 58  IWAHWRHHTIQWRVVGLLALGSIPSTLIALQILKLFQARGLQLEGIINTALGTALVLTAV 117

Query: 140 LMLKRD---RLYCERKFP---------------DNYVKYIWGMVTGFLSGALGVGGGIFT 181
            +  +    R+   R  P                     + G V GFL     +G G   
Sbjct: 118 ALPMKSWLQRMAARRALPKIMQPAYSLRCNPRFTTVSTLVMGGVLGFLVTLSSIGAGALG 177

Query: 182 NLLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            +++LF   G    +  AT    +  +   A +              W LG V++  +  
Sbjct: 178 AVVLLFLYPGLRTVQVVATDITHAVPLTAIAGIG------------HWYLGSVDMVLLGN 225

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +L  S+    +A+ +   I ++ +    + ++      F
Sbjct: 226 LLLGSLPGIYVASHIGVNIPERTMQTVLATLLMLVGIKF 264


>gi|169633557|ref|YP_001707293.1| hypothetical protein ABSDF1939 [Acinetobacter baumannii SDF]
 gi|184158065|ref|YP_001846404.1| permease [Acinetobacter baumannii ACICU]
 gi|332874525|ref|ZP_08442428.1| hypothetical protein HMPREF0022_02047 [Acinetobacter baumannii
           6014059]
 gi|169152349|emb|CAP01274.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter baumannii]
 gi|183209659|gb|ACC57057.1| predicted permease [Acinetobacter baumannii ACICU]
 gi|322508384|gb|ADX03838.1| permease [Acinetobacter baumannii 1656-2]
 gi|323518006|gb|ADX92387.1| permease [Acinetobacter baumannii TCDC-AB0715]
 gi|332737369|gb|EGJ68293.1| hypothetical protein HMPREF0022_02047 [Acinetobacter baumannii
           6014059]
          Length = 263

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 8/121 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++     ++G L+G+ GVGGG V+VP L K         ++ MH  + TSL +I   S M
Sbjct: 143 VLASIGIIAGLLTGMLGVGGGFVIVPALRKV-------TNLDMHSIVATSLMIIFLISGM 195

Query: 85  SFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           S + H   G    + I   +        ++    I  +  + + K FA+    + I M+ 
Sbjct: 196 SIVMHIAEGFHYPVAITSAFALACAFGMLLGRRAIRFIPSAIVQKVFALMVFAVAIYMVI 255

Query: 144 R 144
           +
Sbjct: 256 K 256



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 79/247 (31%), Gaps = 33/247 (13%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP L              +  A    L  +A ++++  +E      +  +       +
Sbjct: 25  LAVPALMT-------SQGWSVAQAAPIGLLAVALSTLIGTIEGLFKKIVRYRAAIWIALI 77

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK-------------- 152
                 +  L+ + +   +L   F++    +G  ++                        
Sbjct: 78  GAPMAHIGILIANTISPIWLMLMFSLVMFTVGYRLISNRISDFHNPPCQVNPSTGRFIWN 137

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
           F    V    G++ G L+G LGVGGG      +       ++   ATS  +  LI+  ++
Sbjct: 138 FKTGGVLASIGIIAGLLTGMLGVGGGFVIVPALRKVTNLDMHSIVATSLMIIFLISGMSI 197

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           ++ I  G+            V I +   +         L  +    I    +   F++++
Sbjct: 198 VMHIAEGFHYP---------VAITSAFALACA--FGMLLGRRAIRFIPSAIVQKVFALMV 246

Query: 272 FTTSFVF 278
           F  +   
Sbjct: 247 FAVAIYM 253


>gi|254244092|ref|ZP_04937414.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|126197470|gb|EAZ61533.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
          Length = 239

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 67/200 (33%), Gaps = 13/200 (6%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S + H + G +N  +    +    I  V+ +++I+  D   L    + + LLMG
Sbjct: 45  VFTTGFSGISHVKLGNVNKSLFLRLLLPGMIGAVLGAVLITRFDGHQLKPFISAYLLLMG 104

Query: 139 ILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           + +L +  R    R+ P +  K       GF+  A G G G      ++  G+       
Sbjct: 105 LYILSKAYRHVITRRAPRHVAKLAL--FGGFVDAAGGGGWGPVVTSSLIGSGSDPRTTIG 162

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +       +   +    I      +              V  ++   +   P A  L   
Sbjct: 163 SVNFAEFFLTIASATSFILLAGQPDT----------WKMVAGLVFGGLFAAPFAALLCKK 212

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           +  + L +    ++   S  
Sbjct: 213 LSPRTLLVIVGTLITLISAY 232


>gi|221133534|ref|ZP_03559839.1| hypothetical protein GHTCC_01274 [Glaciecola sp. HTCC2999]
          Length = 289

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 8/124 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I LI V     G ++G+ G GGG +++P L            + M  A+G SL +IA  S
Sbjct: 171 ILLIAVEGAFVGVITGVLGAGGGFLIIPALVLLM-------GMPMKKAVGASLFIIALKS 223

Query: 83  VMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ F    + G  +++ +L   +    I   ++  +  +++   L K FA F L + + +
Sbjct: 224 LIGFTGDLQSGIDLDIPLLGMMLLATFIGMTISKKIAGNLEGQTLQKFFAYFTLAIAVFI 283

Query: 142 LKRD 145
           + ++
Sbjct: 284 IVKE 287



 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 95/254 (37%), Gaps = 43/254 (16%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP+L           ++   +A G SL ++  T+    + + + G +++K    +   
Sbjct: 45  LTVPILVYLM-------AVPADIATGYSLLIVGATAAYGAISYFKQGLVDVKSSIIFAIP 97

Query: 107 LPITTVVT-SLMISHVDKSF------------LNKAFAIFCLLMGILMLKRDRLYCE--- 150
             +   +T + ++ +V  +             +   FA+  L+   +MLK+         
Sbjct: 98  SIMAVYLTRAYLMPNVPDTLNIATFSFSKNVAIMVFFAVLMLVSAAMMLKKAYAEPITLQ 157

Query: 151 --------RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAG 201
                    K P+  +  + G   G ++G LG GGG      L+L  G  + KA   S  
Sbjct: 158 QAGSDVVMTKSPNILLIAVEGAFVGVITGVLGAGGGFLIIPALVLLMGMPMKKAVGASLF 217

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           + AL +       + SG  L+           I  + ++L  + +   ++ K++  +  +
Sbjct: 218 IIALKSLIGFTGDLQSGIDLD-----------IPLLGMMLLATFIGMTISKKIAGNLEGQ 266

Query: 262 YLTIGFSMIMFTTS 275
            L   F+      +
Sbjct: 267 TLQKFFAYFTLAIA 280


>gi|241204714|ref|YP_002975810.1| hypothetical protein Rleg_1991 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858604|gb|ACS56271.1| protein of unknown function DUF81 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 262

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 95/277 (34%), Gaps = 38/277 (13%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  L  ++    G L G+ GVGGG +M P+L   F        +    A+GT L   A
Sbjct: 1   MTFEPLYSLSGLFVGALVGITGVGGGSLMTPLLVLLF-------GVHPATAVGTDLLYAA 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIF 133
            T       H  HG +N +I+           ++   +++ VD       + +  A    
Sbjct: 54  ITKTAGTAVHGMHGRVNWRIVGSLAAGSLPAALLMLWLLAGVDRKSIGVTNTITTALGWL 113

Query: 134 CLLMGILMLKRDRL-----------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++  I+++ R  +              +      +  I G V G L     VG G    
Sbjct: 114 LVMTAIMLVFRGPILELARRAVGDRTPPKPTTILALTVILGFVLGVLVTLTSVGAGALGV 173

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
            ++L       + +   +    +  +                    W +G ++   +L +
Sbjct: 174 TILLVLYPRLDVREIVGSDIVHAVPLTLIGGTGY------------WLIGEIDWPMLLAL 221

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L  SI    + + L+  + ++ + I  +  +   +  
Sbjct: 222 LIGSIPGIIIGSLLAPKLHERTIRIVLAATLAVVALK 258


>gi|306519417|ref|ZP_07405764.1| hypothetical protein CdifQ_04330 [Clostridium difficile QCD-32g58]
          Length = 108

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGG +++P L            I   +A   +L    P ++++   H ++  +  K++  
Sbjct: 2   GGGTILIPALVLL-------AGIDTKIAQSVNLLSSIPMTLIALAIHIKNKNVIFKLVIP 54

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
                 +  V  SL+ +++    L K F IF LL+G+  +K+       K P
Sbjct: 55  IAVFGVLGAVFGSLLANYLSSDILKKIFGIFLLLVGLFEVKKGFCAKSDKKP 106


>gi|315586222|gb|ADU40603.1| integral membrane protein [Helicobacter pylori 35A]
          Length = 277

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 75/215 (34%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G +++K          +  ++ S ++  +D   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLKEGSFAALGGLMGAILGSFILKIIDDKILMAVFVVVVCYTFIKYAFS 119

Query: 145 DRLYCE-------------------RKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
           +    E                   R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 NNKKPEHFEEMHFDLHANNKTPEKKRSLPFVSIDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|260555064|ref|ZP_05827285.1| permease [Acinetobacter baumannii ATCC 19606]
 gi|260411606|gb|EEX04903.1| permease [Acinetobacter baumannii ATCC 19606]
          Length = 263

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 8/121 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++     ++G L+G+ GVGGG V+VP L K         ++ MH  + TSL +I   S M
Sbjct: 143 VLASIGIIAGLLTGMLGVGGGFVIVPALRKV-------TNLDMHSIVATSLMIIFLISGM 195

Query: 85  SFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           S + H   G    + I   +        ++    I  +  + + K FA+    + I M+ 
Sbjct: 196 SIVMHIAEGFHYPVAITSAFALACAFGMLLGRRAIRFIPSAIVQKVFALMVFAVAIYMVI 255

Query: 144 R 144
           +
Sbjct: 256 K 256



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 79/247 (31%), Gaps = 33/247 (13%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP L              +  A    L  +A ++++  +E      +  +       +
Sbjct: 25  LAVPALMT-------SQGWSVAQAAPIGLLAVALSTLIGTIEGLFKKIVRYRAAIWIALI 77

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK-------------- 152
                 +  L+ + +   +L   F++    +G  ++                        
Sbjct: 78  GAPMAHIGILIANTISSIWLMLMFSLVMFTVGYRLISNRVSDFHNPPCQVNPSTGRFIWN 137

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
           F    V    G++ G L+G LGVGGG      +       ++   ATS  +  LI+  ++
Sbjct: 138 FKTGGVLASIGIIAGLLTGMLGVGGGFVIVPALRKVTNLDMHSIVATSLMIIFLISGMSI 197

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           ++ I  G+            V I +   +         L  +    I    +   F++++
Sbjct: 198 VMHIAEGFHYP---------VAITSAFALACA--FGMLLGRRAIRFIPSAIVQKVFALMV 246

Query: 272 FTTSFVF 278
           F  +   
Sbjct: 247 FAVAIYM 253


>gi|15811143|gb|AAL08822.1|AF308666_1 gas vesicle protein-like protein [Ehrlichia ruminantium]
          Length = 269

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 58/148 (39%), Gaps = 8/148 (5%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           LY   L +   +  +             +G LS + GVGGG ++VP +    +       
Sbjct: 119 LYGLPLKMRFPRSGLYISAIPPFALGGFAGVLSAIMGVGGGFILVPAMLYVLR------- 171

Query: 65  ICMHVAMGTSLG-VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           +   V +GTSL  +I  T++ + ++  R+ T+++ +    +    +     + +      
Sbjct: 172 MKAGVVVGTSLFQIIIVTAMTTILQAGRNQTVDIVLSTILLVGGVVGAQYGARLSGRFRP 231

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCER 151
             L    A+  LL+GI M     +    
Sbjct: 232 DVLRMLLALIVLLVGIQMGLELFVRPSD 259



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 76/260 (29%), Gaps = 50/260 (19%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
               +GI  S    VA+ +    +  +S    + +     ++ +I         +  ++ 
Sbjct: 4   ILIFLGIPPS----VAVASQASHVVASSTSGVISYTSQKAVDYRIGGVMALGGVVGALLG 59

Query: 115 SLMISHVD-----KSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK---------- 159
             +  ++         +  ++ +F   +G LML        R+     V           
Sbjct: 60  VELFRYLRLLGQADMAVAVSYLLFLGTIGTLMLYESLGQILRRVRGEVVPHRERRRPMWL 119

Query: 160 ---------------------YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
                                +  G   G LS  +GVGGG      ML+    +      
Sbjct: 120 YGLPLKMRFPRSGLYISAIPPFALGGFAGVLSAIMGVGGGFILVPAMLYV-LRMKAGVVV 178

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
              +  +I   A+   + +G             V+I    I+L   ++      +LS   
Sbjct: 179 GTSLFQIIIVTAMTTILQAGRNQT---------VDIVLSTILLVGGVVGAQYGARLSGRF 229

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L +  ++I+       
Sbjct: 230 RPDVLRMLLALIVLLVGIQM 249


>gi|254445422|ref|ZP_05058898.1| conserved domain protein, putative [Verrucomicrobiae bacterium
           DG1235]
 gi|198259730|gb|EDY84038.1| conserved domain protein, putative [Verrucomicrobiae bacterium
           DG1235]
          Length = 251

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 87/235 (37%), Gaps = 25/235 (10%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G +  L G GGGL+ +P L  A    G+       VA+GT+    +  +  +     ++G
Sbjct: 17  GFIDTLAG-GGGLIALPALLMA----GVPPL----VALGTNKLQGSVGTATASWMMVKNG 67

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
            +  + ++  + +    +   S+ +  VD S L+    I      +  L   ++    K 
Sbjct: 68  RVEWRDVRSLMALAFCGSAGGSVAVQFVDVSVLSLLIPIVLTSTALYFLLMPQVRERGKV 127

Query: 154 PDNYVKYIWGM---VTGFLSGALGVGGGIFTNLL-MLFYGASIYKATATSAGVSALIAFP 209
               V    G      G+  G  G G G F +L  +   G  + +ATA +  ++      
Sbjct: 128 LKARVGVFRGFAVPGIGWYDGMFGPGTGSFFSLAGVSLRGQGLVEATAVAKTLNFATNIA 187

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           +L V +++G             V   A   ++   +L   L +     I  + L 
Sbjct: 188 SLCVFLFAGK------------VAWLAGGTMILGQLLGAWLGSHCLLRINPQVLR 230


>gi|224371872|ref|YP_002606038.1| hypothetical protein HRM2_48260 [Desulfobacterium autotrophicum
           HRM2]
 gi|223694591|gb|ACN17874.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 263

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 87/256 (33%), Gaps = 38/256 (14%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F+   L  + G GGG   V +L  A         I MH A  T   ++   S+ + +  +
Sbjct: 11  FVVAVLMTMVGKGGGNFYVVILVMA--------GIPMHQAATTGQFILFAASIAAMVVFQ 62

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           ++ +++  +         +  +             L   FA      G +ML   +   +
Sbjct: 63  KNKSVSWSLALLIGSTTSLAALGGGYFSHLFSGFTLKLIFAFMLFAAGAVMLVPVKKENK 122

Query: 151 RKFPDN-----------------YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASI 192
               D                  ++     ++TGF SG +GV GG F   LM +     +
Sbjct: 123 GSLEDRFGIIKIKSNNQIYGVNLWIAIPVTILTGFGSGMVGVSGGSFLVPLMVIACSIPM 182

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           + A  T++ + A  AF         G   +  P W++          +  I+I    +  
Sbjct: 183 HTAVGTASTLIAATAFMGFFGHAVQG---DFNPAWAI---------FLAVITIAGGVIGG 230

Query: 253 KLSYMIGKKYLTIGFS 268
           K +     K L   F+
Sbjct: 231 KFALKTKPKSLKKLFA 246



 Score = 42.0 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 33/91 (36%)

Query: 54  KAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV 113
               LM I  SI MH A+GT+  +IA T+ M F  H   G  N         +     V+
Sbjct: 169 FLVPLMVIACSIPMHTAVGTASTLIAATAFMGFFGHAVQGDFNPAWAIFLAVITIAGGVI 228

Query: 114 TSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                       L K FA    L  + M+  
Sbjct: 229 GGKFALKTKPKSLKKLFAYTNWLAAVFMVIN 259



 Score = 38.9 bits (90), Expect = 0.86,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 12/115 (10%)

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            V   L   +G GGG F  ++++  G  +++A  T   +    +  A++V        N 
Sbjct: 11  FVVAVLMTMVGKGGGNFYVVILVMAGIPMHQAATTGQFILFAASIAAMVVF-----QKNK 65

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              WSL        L+I   + L        S++     L + F+ ++F    V 
Sbjct: 66  SVSWSL-------ALLIGSTTSLAALGGGYFSHLFSGFTLKLIFAFMLFAAGAVM 113


>gi|149174901|ref|ZP_01853525.1| hypothetical protein PM8797T_11014 [Planctomyces maris DSM 8797]
 gi|148846238|gb|EDL60577.1| hypothetical protein PM8797T_11014 [Planctomyces maris DSM 8797]
          Length = 292

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 56/292 (19%), Positives = 108/292 (36%), Gaps = 59/292 (20%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI     L G L+G+FGVGGG ++VP+L+           I M +A+G S   +   +  
Sbjct: 10  LISTTGGLIGFLAGMFGVGGGFLLVPILNIVL-------GIPMELAVGASACQVLGPATT 62

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------------LNKAFA 131
           S +  R+    ++         L +  +  + ++ H   S              L    A
Sbjct: 63  SLLA-RKIKVRDLFFPLVITGGLLLGVIAGTGILEHAKSSAAVMINGRNIIVADLVVLIA 121

Query: 132 IFCLLMGILMLK------------------RDRLYCERKFPDNYVKYIWGMVTGFL---- 169
            F +L G+ +L                   R ++    +FP      +   V  +     
Sbjct: 122 YFLMLTGLGVLSLRSARRDDSELSATLFTDRFQIPPVVRFPGLVEAPLSIPVIAWFGLGL 181

Query: 170 ---SGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
              SG LG+ GGI    +++F  G   ++A   S  +  ++AF + +   +         
Sbjct: 182 GLVSGLLGISGGILLFPILIFGLGIPTHRAITCSLVIVWVVAFQSTIAHAWH-------- 233

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               G ++I  V+ +L    +   L + L+  +    L   F  ++ + + +
Sbjct: 234 ----GNISIMIVIALLFGGTVGARLGSDLNARLKGLQLRRQFGWLLISVALM 281



 Score = 40.8 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 45/103 (43%), Gaps = 7/103 (6%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           + GG+++ P+L            I  H A+  SL ++   +  S + H  HG I++ I+ 
Sbjct: 190 ISGGILLFPILIFGL-------GIPTHRAITCSLVIVWVVAFQSTIAHAWHGNISIMIVI 242

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +F   +   + S + + +    L + F    + + +++  R
Sbjct: 243 ALLFGGTVGARLGSDLNARLKGLQLRRQFGWLLISVALMIGMR 285


>gi|28897592|ref|NP_797197.1| hypothetical protein VP0818 [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363309|ref|ZP_05776176.1| adenylosuccinate synthase [Vibrio parahaemolyticus K5030]
 gi|260878252|ref|ZP_05890607.1| adenylosuccinate synthase [Vibrio parahaemolyticus AN-5034]
 gi|260895432|ref|ZP_05903928.1| adenylosuccinate synthase [Vibrio parahaemolyticus Peru-466]
 gi|260903340|ref|ZP_05911735.1| adenylosuccinate synthase [Vibrio parahaemolyticus AQ4037]
 gi|28805804|dbj|BAC59081.1| putative membrane protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|308088616|gb|EFO38311.1| adenylosuccinate synthase [Vibrio parahaemolyticus Peru-466]
 gi|308090204|gb|EFO39899.1| adenylosuccinate synthase [Vibrio parahaemolyticus AN-5034]
 gi|308107992|gb|EFO45532.1| adenylosuccinate synthase [Vibrio parahaemolyticus AQ4037]
 gi|308113602|gb|EFO51142.1| adenylosuccinate synthase [Vibrio parahaemolyticus K5030]
          Length = 251

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 96/259 (37%), Gaps = 26/259 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S ++ TL+ L G G GL+  P+L            +   VA+GT         + +
Sbjct: 9   LFFGSLVANTLASLSGGGAGLLQFPLLIFL--------GLPFSVALGTHKVASVALGLGA 60

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H + GTI + I    IFV  I  V+ + +I H+      K      L +GI    + 
Sbjct: 61  ASTHLKAGTIKLPIALYLIFVGSIGVVIGANLIVHISDGIAEKMLGSMILALGIYSRLKK 120

Query: 146 RLYC-----ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA-T 198
           +L        R      +  I  M+ G ++G+L  G G+   L ++ ++G    +A A T
Sbjct: 121 QLGQIEIIKRRNQLGWILGGIGIMLIGIVNGSLTAGSGLLVTLFLVRWFGFDYKQAVAYT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
              V         +  + +G             ++   + ++L  S L   L    +   
Sbjct: 181 MICVGLFWNGIGGVAIVQAGAP-----------IHWAWLPVLLLSSFLGGSLGAWAATRY 229

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             + + I F ++ F     
Sbjct: 230 SNRVIKIAFEILTFAVGIK 248


>gi|193077338|gb|ABO12137.2| putative membrane protein [Acinetobacter baumannii ATCC 17978]
          Length = 263

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 8/121 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++     ++G L+G+ GVGGG V+VP L K         ++ MH  + TSL +I   S M
Sbjct: 143 VLASIGIIAGLLTGMLGVGGGFVIVPALRKV-------TNLDMHSIVATSLMIIFLISGM 195

Query: 85  SFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           S + H   G    + I   +        ++    I  +  + + + FA+    + I M+ 
Sbjct: 196 SIVMHIAEGFHYPVAITSAFALACAFGMLLGRRAIRFIPSAIVQRVFALMVFAVAIYMVI 255

Query: 144 R 144
           +
Sbjct: 256 K 256



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 79/247 (31%), Gaps = 33/247 (13%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP L              +  A    L  +A ++++  +E      +  +       +
Sbjct: 25  LAVPALMT-------SQGWSVAQAAPIGLLAVALSTLIGTIEGLFKKIVRYRAAIWIALI 77

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK-------------- 152
                 +  L+ + +   +L   F++    +G  ++                        
Sbjct: 78  GAPMAHIGILIANTISPIWLMLMFSLVMFTVGYRLISNRVSDFHNPPCQVNPSTGRFIWN 137

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
           F    V    G++ G L+G LGVGGG      +       ++   ATS  +  LI+  ++
Sbjct: 138 FKTGSVLASIGIIAGLLTGMLGVGGGFVIVPALRKVTNLDMHSIVATSLMIIFLISGMSI 197

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           ++ I  G+            V I +   +         L  +    I    +   F++++
Sbjct: 198 VMHIAEGFHYP---------VAITSAFALACA--FGMLLGRRAIRFIPSAIVQRVFALMV 246

Query: 272 FTTSFVF 278
           F  +   
Sbjct: 247 FAVAIYM 253


>gi|317177042|dbj|BAJ54831.1| hypothetical protein HPF16_0234 [Helicobacter pylori F16]
          Length = 277

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 76/215 (35%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G +++K      F   +  V+ S ++  +D   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLKEGSFAAFGGLMGAVLGSFILKIIDDKILMAVFVVVVCYTFIKYAFS 119

Query: 145 DRLYCE-------------------RKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
           +    E                   R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 NNKKPEHFEEMHFDLHANNKTPEKKRPIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|312137341|ref|YP_004004678.1| hypothetical protein Mfer_1124 [Methanothermus fervidus DSM 2088]
 gi|311225060|gb|ADP77916.1| protein of unknown function DUF81 [Methanothermus fervidus DSM
           2088]
          Length = 259

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 96/267 (35%), Gaps = 29/267 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y  +  +   L+G + GL G GG ++M+PV+   F            +A+GT+L  +  T
Sbjct: 3   YYIIYFITGLLAGVVGGLLGTGGCVIMMPVIRFGFHFDP-------AIAVGTTLTAVVFT 55

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD--KSFLNKAFAIFCLLMGI 139
           +     +H +   ++ +      +   +  ++ S++  ++    + ++    I  +++ +
Sbjct: 56  AGFGAFQHIKMKNVDKETALLTGYSGILGVIIGSIIFGYIKNHGNLIDLIVGIAFIVVSL 115

Query: 140 LMLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG-----IFTNLLMLFYGAS 191
            ML      ++    +        +   + G + G L    G            LF  + 
Sbjct: 116 RMLYEGLFAKIKQVEQVQKIPGTPLSKTIIGSVIGTLTGIIGLGGGYALVPSYTLFLRSP 175

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           I  A  TS      IA    + +I+ G             VNI A + +   + +     
Sbjct: 176 IKLAIGTSMAAFVWIALVGAIYKIFQGV------------VNIPAAIALGIGAAIGAIYG 223

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            KL        L I F ++    S  +
Sbjct: 224 AKLVAKFKSNVLKILFGLLFTYVSLKY 250


>gi|23016247|ref|ZP_00056005.1| COG0730: Predicted permeases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 301

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 85/256 (33%), Gaps = 54/256 (21%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           VGGG ++ P+L       GI  +    VA+ +    +  +SV     H R   +++K+  
Sbjct: 34  VGGGFLLTPLLIML----GIPPA----VAVASGANQVLGSSVSGVFAHWRRRNVDVKMAV 85

Query: 102 DWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLMGILML-------------- 142
             +      + V   + + +         ++ ++  F   +G+LML              
Sbjct: 86  FLLVGGFAGSGVGVWLFALLKRLGQIDLVISLSYVGFLGSVGLLMLIETLMSMRAGAAGR 145

Query: 143 ---------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
                           R R      +    +    G   G L+  +GVGGG     LM++
Sbjct: 146 PPGRRHVHHSWHGLPFRTRFPRSGLYISALLPLGVGAFGGLLAALMGVGGGFILVPLMIY 205

Query: 188 -YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
             G        TS           L   I+    +  L   +   V++   LI+L    +
Sbjct: 206 ILGMPTAVVVGTS-----------LFQMIFVTANVTLLQAMTTHTVDLPLALILLVGGAV 254

Query: 247 ITPLATKLSYMIGKKY 262
                ++L   +G + 
Sbjct: 255 GAQFGSRLGERLGGEK 270



 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 8/102 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-TS 82
            L +      G L+ L GVGGG ++VP++            +   V +GTSL  +   T+
Sbjct: 175 LLPLGVGAFGGLLAALMGVGGGFILVPLMIYIL-------GMPTAVVVGTSLFQMIFVTA 227

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
            ++ ++     T+++ +    +    +     S +   +   
Sbjct: 228 NVTLLQAMTTHTVDLPLALILLVGGAVGAQFGSRLGERLGGE 269


>gi|260902204|ref|ZP_05910599.1| permease [Vibrio parahaemolyticus AQ4037]
 gi|308108459|gb|EFO45999.1| permease [Vibrio parahaemolyticus AQ4037]
          Length = 259

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 16/199 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  +     R+G +++K ++  I    I   + +  +  +D S L   
Sbjct: 46  ALATNKLQSSFGSFSASWYFVRNGIVSLKEMRFAILCTFIGAAIGAEAVQFIDASVLTSL 105

Query: 130 FAIFCLLMGILMLK---RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             +  + + +  L      ++  E K  +       G   GF  G  G G G IFT   +
Sbjct: 106 IPVLLIAISLYFLLAPSSRKIDGEPKLAEAMFALCIGGGVGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                S+  ATA +  ++      ALL  + +G     LP W +G       L +     
Sbjct: 166 ALGHFSLVDATARTKILNFTSNIAALLFFVLAG-----LPVWEIG-------LTMAVGGF 213

Query: 246 LITPLATKLSYMIGKKYLT 264
           +   L  K+    G+K++ 
Sbjct: 214 IGAQLGAKVVVTKGQKWIR 232


>gi|330808651|ref|YP_004353113.1| hypothetical protein PSEBR_a1889 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376759|gb|AEA68109.1| Conserved hypothetical protein; putative membrane protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 261

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 91/264 (34%), Gaps = 39/264 (14%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT 94
            + G+ GVGGG +M P+L       GI+ +     A+GT L   A T     + H ++  
Sbjct: 17  FIVGMTGVGGGSLMTPILLW----FGINPAT----AVGTDLLYAAITKSGGVLVHAKNRN 68

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGILMLKRDRLY 148
           I+  I             +T   +S +  S       + +A         + +L + RL 
Sbjct: 69  IDWAITGWLTLGSVPAVGLTLWFLSSLHSSPEAMNAVIKQALGFVLFATALAILFKKRLL 128

Query: 149 CERK-----------FPDNYVKYIWGMVTGFLSGALGVGGGIFTN--LLMLFYGASIYKA 195
                             N +  I G+V G +     +G G      L +L+      + 
Sbjct: 129 QFAHDRAGGHYNPSGSRLNVLTVITGLVLGAMVALTSIGAGALGTVALFILYPFLVTKRL 188

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T    +  +              + GL   S+G ++   +  +L  S+    L + LS
Sbjct: 189 VGTEIAHAVPLTL------------VAGLGHASMGNMDWHILGFLLIGSLPGIYLGSHLS 236

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
             I  + L    ++++    F  A
Sbjct: 237 GRISDELLRPCLAVMLAMIGFKLA 260



 Score = 40.4 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 42/120 (35%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + G +  L  +G G +    L   +  +           +GT +    P ++
Sbjct: 148 VLTVITGLVLGAMVALTSIGAGALGTVALFILYPFL------VTKRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G ++  IL   +        + S +   +    L    A+   ++G  +  
Sbjct: 202 VAGLGHASMGNMDWHILGFLLIGSLPGIYLGSHLSGRISDELLRPCLAVMLAMIGFKLAF 261


>gi|28897248|ref|NP_796853.1| hypothetical protein VP0474 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153838424|ref|ZP_01991091.1| inner membrane protein YfcA [Vibrio parahaemolyticus AQ3810]
 gi|260366317|ref|ZP_05778769.1| permease [Vibrio parahaemolyticus K5030]
 gi|260876215|ref|ZP_05888570.1| permease [Vibrio parahaemolyticus AN-5034]
 gi|260897169|ref|ZP_05905665.1| permease [Vibrio parahaemolyticus Peru-466]
 gi|28805457|dbj|BAC58737.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149748187|gb|EDM59046.1| inner membrane protein YfcA [Vibrio parahaemolyticus AQ3810]
 gi|308087993|gb|EFO37688.1| permease [Vibrio parahaemolyticus Peru-466]
 gi|308093047|gb|EFO42742.1| permease [Vibrio parahaemolyticus AN-5034]
 gi|308114723|gb|EFO52263.1| permease [Vibrio parahaemolyticus K5030]
          Length = 259

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 16/199 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  +     R+G +++K ++  I    I   + +  +  +D S L   
Sbjct: 46  ALATNKLQSSFGSFSASWYFVRNGIVSLKEMRFAILCTFIGAAIGAEAVQFIDASVLTSL 105

Query: 130 FAIFCLLMGILMLK---RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             +  + + +  L      ++  E K  +       G   GF  G  G G G IFT   +
Sbjct: 106 IPVLLIAISLYFLLAPSSRKIDGEPKLAEAMFALCIGGGVGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                S+  ATA +  ++      ALL  + +G     LP W +G       L +     
Sbjct: 166 ALGHFSLVDATARTKILNFTSNIAALLFFVLAG-----LPVWEIG-------LTMAVGGF 213

Query: 246 LITPLATKLSYMIGKKYLT 264
           +   L  K+    G+K++ 
Sbjct: 214 IGAQLGAKVVVTKGQKWIR 232


>gi|298243594|ref|ZP_06967401.1| protein of unknown function DUF81 [Ktedonobacter racemifer DSM
           44963]
 gi|297556648|gb|EFH90512.1| protein of unknown function DUF81 [Ktedonobacter racemifer DSM
           44963]
          Length = 445

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 77/239 (32%), Gaps = 44/239 (18%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP+L   F+L        +  A+G S+  +  TS  +   + R    N++I        
Sbjct: 195 IVPLLILVFKL-------PVVFAIGASIISVIATSSGAAAAYVRDRLTNLRIGMFLEIAT 247

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK------------------------ 143
            I  +  + +   +  + LN  F +  LL    ++                         
Sbjct: 248 TIGAISGAFLAGVLASNLLNIIFGVILLLSAAPLVVEIGEDTPQGVKNDHLATWLHLSST 307

Query: 144 ----RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATAT 198
               +       +            V G +SG LG+G G F  + +       I  +T T
Sbjct: 308 YPDQKLGKDVAYQVTRTPWGLAMMYVAGLISGLLGIGSGTFKVIALDSLMRLPIKVSTTT 367

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           S  +  + A  +  +    G     +PP     V     L IL  +++   L   +S  
Sbjct: 368 SNFMIGVTAAASAGIYFLRG----DIPPL----VAAPVALGILVGALVGARLLASISNK 418



 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 7/113 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           +++G +SGL G+G G   V  L    +L        + V+  TS  +I  T+  S   + 
Sbjct: 332 YVAGLISGLLGIGSGTFKVIALDSLMRL-------PIKVSTTTSNFMIGVTAAASAGIYF 384

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
             G I   +       + +  +V + +++ +    L   F +  L+  I M+ 
Sbjct: 385 LRGDIPPLVAAPVALGILVGALVGARLLASISNKLLRLIFLLVLLVSAIEMIL 437


>gi|150021592|ref|YP_001306946.1| hypothetical protein Tmel_1722 [Thermosipho melanesiensis BI429]
 gi|149794113|gb|ABR31561.1| protein of unknown function DUF81 [Thermosipho melanesiensis BI429]
          Length = 252

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 89/241 (36%), Gaps = 21/241 (8%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  +  + ++    F +G +  + G GGGL+ +P              +  H A+ T+  
Sbjct: 3   NFTISDMFILFPLIFFAGFVDSIAG-GGGLISLPAYLLI--------GLPSHNALATNKL 53

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  +++S  ++ +   I  +I    I    + + V + +   + ++ L    +I  ++
Sbjct: 54  SSSIGTMISTFKYGKRKYIVFEIAIFSIIFSFLGSYVGASIALMISENRLRLIISILIVI 113

Query: 137 MGILMLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
            GI +  +          +     +  + G   G   G LG G G     L +       
Sbjct: 114 AGIFLTLKKIKLHDGINLRISKKIIASLIGFFIGMYDGFLGPGTGTFLIILYVNVLSLDY 173

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            KA+ T+  V+      AL+  + +G  L         ++   A L  +  + +   LA 
Sbjct: 174 IKASGTTKIVNLASNTSALVTFLVNGKVLF--------YIGFPAALFSILGNWIGASLAI 225

Query: 253 K 253
           K
Sbjct: 226 K 226


>gi|331019004|gb|EGH99060.1| hypothetical protein PLA106_23443 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 271

 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 91/280 (32%), Gaps = 45/280 (16%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L  +     G   G+ G GGG++ VP L                +A+G++       +
Sbjct: 1   MVLDFLYGAGVGLALGMTG-GGGVLAVPALMLGLGYTLPQAKPVALIAVGSA-------A 52

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  ++  R G    K       +  +   +   +   +  + L   F    L + + M 
Sbjct: 53  FIGCLDGLRKGLGRYKAAAVMAVLGTLCAPIGLWLAKALSITMLMIIFCAVLLFISVRMF 112

Query: 143 ------KRDRLYCERKFPDN------------------YVKYIWGMVTGFLSGALGVGGG 178
                 K+     E+                             G ++G  SG LG+GGG
Sbjct: 113 TQAVFPKKPEANQEQNLLSAKCLVNPSTGRFQWTNRCFASLSTIGGISGLFSGMLGLGGG 172

Query: 179 IFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
                 +  F   S++   AT+  V A I+   +   + +G  +       +G       
Sbjct: 173 FIIVPGVRQFSNLSMHGTVATALAVIAFISAGTVSAFLIAGGVIEPTAWRFIG------- 225

Query: 238 LIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                 ++    L   L+  +    L IGFS+++   + +
Sbjct: 226 -----AAVAGMLLGRTLAPKVSGSLLQIGFSLLVCVAAVM 260



 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 7/119 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +     +SG  SG+ G+GGG ++VP + +         ++ MH  + T+L VIA  S  +
Sbjct: 153 LSTIGGISGLFSGMLGLGGGFIIVPGVRQF-------SNLSMHGTVATALAVIAFISAGT 205

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                  G +       +I       ++   +   V  S L   F++   +  +++L +
Sbjct: 206 VSAFLIAGGVIEPTAWRFIGAAVAGMLLGRTLAPKVSGSLLQIGFSLLVCVAAVMLLAK 264


>gi|309780406|ref|ZP_07675156.1| integral membrane protein [Ralstonia sp. 5_7_47FAA]
 gi|308920799|gb|EFP66446.1| integral membrane protein [Ralstonia sp. 5_7_47FAA]
          Length = 252

 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 97/263 (36%), Gaps = 25/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L+ VA FL+G +  + G GGGLV +P L  A+       +I     +GT+       +
Sbjct: 3   FALLAVAGFLAGLIDAVAG-GGGLVQIPALFSAY------PNIAPATLIGTNKVASMSGT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + + + R   I        +    + +++ +  ++H+    L +A      ++ +  +
Sbjct: 56  ATAAVRYGRTVRIYWGATAPAVVTAFVFSLLGAWALTHIPAEPLRRALPFVLAVLLVYTV 115

Query: 143 KRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +  L  +        +      + G   GF  G  G G G     + +  +G     A+
Sbjct: 116 AKKNLGADHAPSLKGWRELAAALLAGAAIGFYDGVFGPGTGSFLMIVFVRVFGYDFLHAS 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A++  V+      ALL+                G V     L++   ++    + + L+ 
Sbjct: 176 ASTKIVNLATNVAALLLLAAK------------GHVWWQLGLVMAVANVAGNQVGSHLAL 223

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G +++   F +++       A
Sbjct: 224 RHGSRFVRKVFIVVVLALILKTA 246


>gi|317151848|ref|YP_004119896.1| hypothetical protein Daes_0123 [Desulfovibrio aespoeensis Aspo-2]
 gi|316942099|gb|ADU61150.1| protein of unknown function DUF81 [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 347

 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 55/132 (41%), Gaps = 13/132 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++  F  G + G FG+GG  ++ P L+             M  A+GT +  IA  S++S
Sbjct: 26  LVLIGFSVGVIGGFFGMGGAWMVTPGLNIL--------GFPMAFAIGTDIAHIAGKSMVS 77

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-----DKSFLNKAFAIFCLLMGIL 140
            M H + G ++ K+    +    +   + + +I ++         +   +  F  L+ ++
Sbjct: 78  TMRHSKFGNVDYKLGFVMVVGTMVGIEIGAQLIMYLERLGKVGDVVRWVYVGFLGLIALM 137

Query: 141 MLKRDRLYCERK 152
           +         +K
Sbjct: 138 VFYDYFKAVSKK 149



 Score = 38.9 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 7/96 (7%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L               H+A+GT L  +  + +     +   G I +  +   +    I
Sbjct: 216 PALVYLI-------GCPTHIAVGTDLFEVMISGLYGAFTYTLKGRIELVAVFVMLTGAAI 268

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              + ++   +     +  AF I  L   I ++ + 
Sbjct: 269 GAQIGTVATKYAKGYGIRVAFGIAVLCCMISIILKQ 304


>gi|297572037|ref|YP_003697811.1| hypothetical protein Arch_1491 [Arcanobacterium haemolyticum DSM
           20595]
 gi|296932384|gb|ADH93192.1| protein of unknown function DUF81 [Arcanobacterium haemolyticum DSM
           20595]
          Length = 248

 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 96/260 (36%), Gaps = 29/260 (11%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +A    GT+ G+ G GGG++ VP+L    +    +       A   SL ++  T+ ++ +
Sbjct: 6   LAGITIGTIVGVLGAGGGILAVPILIYVLEQTPYN-------ATAESLVIVGLTAFIAML 58

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR--- 144
              R  +I  +    +        V+ S +   VD +FL   F++  L +GI ML +   
Sbjct: 59  MRWR--SIQFREGFIFSGGAIAGAVIGSRLTPLVDGNFLLALFSVLLLCIGITMLTKVLR 116

Query: 145 -----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
                +     RK          G            GG +    L+   G  I  A+ATS
Sbjct: 117 GTGNEEIHQISRKPIITVTLTALGTGI-LTGFFGVGGGFVVVPALVFVLGIPIRFASATS 175

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             V  L A   LL RI +G             ++    L     S+    +   LS  + 
Sbjct: 176 LLVMVLTAASGLLARIGTGV-----------IIDWKVTLAFSFASMFGGFIGGPLSNRLP 224

Query: 260 KKYLTIGFSMIMFTTSFVFA 279
            K L++ F  ++   +   A
Sbjct: 225 AKALSVIFGCLLIGVALFIA 244



 Score = 42.0 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 8/120 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  + + +  +G L+G FGVGGG V+VP L            I +  A  TSL V+  T+
Sbjct: 131 IITVTLTALGTGILTGFFGVGGGFVVVPALVFVL-------GIPIRFASATSLLVMVLTA 183

Query: 83  VMSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
               +     G  I+ K+   + F       +   + + +    L+  F    + + + +
Sbjct: 184 ASGLLARIGTGVIIDWKVTLAFSFASMFGGFIGGPLSNRLPAKALSVIFGCLLIGVALFI 243


>gi|159030537|emb|CAO91444.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 245

 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 67/197 (34%), Gaps = 13/197 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  +++A  L+   S L G G  L+++PVL        I   +   + +G         
Sbjct: 2   IIVTLMLAGSLAWFFSTLAGGGSPLILLPVLGWFLDAAVIPPVLTTGMLIG--------- 52

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                        I+      ++    + + + + + +H+   +L     IF +   +  
Sbjct: 53  --NVQRMGMYWRAIDWPSTVWYLPGAIMGSTLGAFVFAHLQFKWLPLVLGIFLVFSSLKQ 110

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L   +     +    Y     G +  FLSG +G   G   NL  + YG       AT + 
Sbjct: 111 LFPQQENLFFEIKTWYFMPS-GFIYAFLSGLVG-STGPMMNLFYINYGLVKEPMVATKSV 168

Query: 202 VSALIAFPALLVRIYSG 218
              ++    L+     G
Sbjct: 169 HMVVVHVAKLIAYAAFG 185


>gi|153838365|ref|ZP_01991032.1| adenylosuccinate synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149748224|gb|EDM59083.1| adenylosuccinate synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 251

 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 95/259 (36%), Gaps = 26/259 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S ++ TL+ L G G GL+  P+L            +   VA+GT         + +
Sbjct: 9   LFFGSLVANTLASLSGGGAGLLQFPLLIFL--------GLPFSVALGTHKVASVALGLGA 60

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H + GTI + I    IFV  I  V+ + +I  +      K      L +GI    + 
Sbjct: 61  ASTHLKAGTIKLPIALYLIFVGSIGVVIGANLIVQIPDGIAEKMLGSMILALGIYSRLKK 120

Query: 146 RLYC-----ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA-T 198
           +L        R      +  I  M+ G ++G+L  G G+   L ++ ++G    +A A T
Sbjct: 121 QLGQIEIIKRRDQLGWILGGIGIMLIGIVNGSLTAGSGLLVTLFLVRWFGFDYKQAVAYT 180

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
              V         +  + +G             ++   + ++L  S L   L    +   
Sbjct: 181 MICVGLFWNGIGGVAIVQAGAP-----------IHWAWLPVLLLSSFLGGSLGAWAATRY 229

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             + + I F ++ F     
Sbjct: 230 SNRVIKIAFEILTFAVGIK 248


>gi|186683301|ref|YP_001866497.1| hypothetical protein Npun_R3059 [Nostoc punctiforme PCC 73102]
 gi|186465753|gb|ACC81554.1| protein of unknown function DUF81 [Nostoc punctiforme PCC 73102]
          Length = 278

 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 88/259 (33%), Gaps = 45/259 (17%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +V+VP LS           + +H A+G SL  +  TS  +   + + G  NM++      
Sbjct: 30  VVIVPFLSVV-------CGVDLHYAIGASLLSVIATSSGAASAYVKEGYTNMRLGMFLEI 82

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-------- 157
                 V  +++ + +    +   F I  L    L  K      +   PD          
Sbjct: 83  ATTFGAVAGAVVAAKISTGVIAIVFGIVLLYSAYLSRKPYSENIDNLPPDPLATRLKLNS 142

Query: 158 ---------------VKYIWG--MVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATS 199
                          V + +G   + G LSG LG+G G    L M          +T TS
Sbjct: 143 TYPTSTGEQSYNVRGVPFGFGLMFIAGVLSGLLGIGSGALKVLAMDQIMHIPFKVSTTTS 202

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +  + A  +  + +  G+   GL         +  +L +L  ++L      ++     
Sbjct: 203 NFMIGVTAAASAGIYLNRGYIDPGLA--------MPVMLGVLCGAVL----GARVLVRAR 250

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            + L   FS ++   +   
Sbjct: 251 VQLLRNIFSGVILVLALEM 269



 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F++G LSGL G+G G + V  + +          I   V+  TS  +I  T+  S   + 
Sbjct: 166 FIAGVLSGLLGIGSGALKVLAMDQIMH-------IPFKVSTTTSNFMIGVTAAASAGIYL 218

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I+  +    +  +    V+ + ++       L   F+   L++ + M+ +
Sbjct: 219 NRGYIDPGLAMPVMLGVLCGAVLGARVLVRARVQLLRNIFSGVILVLALEMIYK 272


>gi|327400924|ref|YP_004341763.1| hypothetical protein Arcve_1037 [Archaeoglobus veneficus SNP6]
 gi|327316432|gb|AEA47048.1| protein of unknown function DUF81 [Archaeoglobus veneficus SNP6]
          Length = 339

 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/248 (10%), Positives = 56/248 (22%), Gaps = 60/248 (24%)

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM-ISHVDKSFLNKAFAIFCLLMG 138
             +V S +       +             +       +    +  S     F +   L+ 
Sbjct: 91  FNAVSSTINWYTQKRLVWPAGLFLGIGAVLGAQAGVWLTGGKLGISVYKGVFGLGTYLIA 150

Query: 139 ILMLKRDRLYCERKF--------------------------------------------- 153
             M  +     +                                                
Sbjct: 151 AYMFYQLTPRAKASKAKGREAAKRFAQKVKELKEAGRLHELEGIKNLKVGTYTEFEFFGE 210

Query: 154 ---PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPA 210
                NY+ +I G + GF+S  LG+GGG      +   G  +Y     S           
Sbjct: 211 QFKIGNYIPFIVGFLIGFMSAVLGIGGGFLFVPFLTSLGLPMYIVPGASTLAVFFTQTST 270

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           +L  +  G     +P        +     I   S     +  +    +   ++   F ++
Sbjct: 271 ILGWLARGVEFPLVPI-------LIGWAGIFIGSY----IGPRTQKYLPMDFMYGLFGVL 319

Query: 271 MFTTSFVF 278
                  +
Sbjct: 320 ATYVGTRY 327



 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 11/120 (9%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +  FL G +S + G+GGG + VP L+           + M++  G S   +  T   + 
Sbjct: 220 FIVGFLIGFMSAVLGIGGGFLFVPFLTSL--------GLPMYIVPGASTLAVFFTQTSTI 271

Query: 87  MEHRRHGTINMKILKDWI--FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +     G +   ++   I    + I + +      ++   F+   F +    +G      
Sbjct: 272 LGWLARG-VEFPLVPILIGWAGIFIGSYIGPRTQKYLPMDFMYGLFGVLATYVGTRYFLS 330


>gi|49082936|gb|AAT50868.1| PA1824 [synthetic construct]
          Length = 260

 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 93/266 (34%), Gaps = 31/266 (11%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + +  V +FL+G +  + G GGGL+ +P L  A    G+      H+A+GT+      
Sbjct: 10  STLIIPAVVAFLAGFIDAIAG-GGGLLTIPALLTA----GVPP----HLALGTNKLSSTF 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     R    +    ++ +    I   + +     +   +LN+   +     G+ 
Sbjct: 61  GAATASYTFYRRKLFHPGKWRNGLLATAIGAAIGAWAAHLLPAEWLNRMLPVVVFTCGLY 120

Query: 141 MLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
           ML                   ++  G+  GF  G  G G G F T   +L Y   + +A+
Sbjct: 121 MLFGGTPKAPLDADAPLGRKRQWPQGLALGFYDGVAGPGTGAFWTVSSLLMYPLDLVRAS 180

Query: 197 ATSAGVSA---LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
             +  ++    ++A    +                 G V     L +    ++      +
Sbjct: 181 GVARSMNFVSNIVALAVFIAS---------------GQVIWLLGLCMGASLMVGAYFGAR 225

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +   G K++   F +++   +   A
Sbjct: 226 TAIGGGAKFIRPVFILVVLALTARLA 251


>gi|325962799|ref|YP_004240705.1| permease [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468886|gb|ADX72571.1| putative permease [Arthrobacter phenanthrenivorans Sphe3]
          Length = 264

 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 74/211 (35%), Gaps = 14/211 (6%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M    +   +  + LI++A F +G +  + G GGGL+ +P L            I    A
Sbjct: 1   MESGLESLGLATLLLIVLAGFAAGWVDAVVG-GGGLIQLPALLLV-------PGITPVQA 52

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           + T+       +  S   + R    +++       +    +   +++ + +  S      
Sbjct: 53  LATNKMGSIFGTATSAATYYRRVGPDLRTALPMAVIALAGSFGGAVLAASLPASVFKPII 112

Query: 131 AIFCLLMGILMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLL 184
               + + +    +  +               V  + G V GF  G +G G G      L
Sbjct: 113 VTALVAVALFTALKPDVGGITVLRHDGHKHYVVACLIGAVIGFYDGLIGPGTGSFLVIAL 172

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRI 215
           +   G +  +A+A +  V+      ALL  +
Sbjct: 173 VSAMGYAFLEASAKAKIVNMATNAGALLFFL 203


>gi|84495272|ref|ZP_00994391.1| hypothetical protein JNB_10739 [Janibacter sp. HTCC2649]
 gi|84384765|gb|EAQ00645.1| hypothetical protein JNB_10739 [Janibacter sp. HTCC2649]
          Length = 273

 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 88/251 (35%), Gaps = 37/251 (14%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L                 A   SL ++  TS+++ + H R   + +     +  +  
Sbjct: 32  VPALVYVL-------GQDPRSATTGSLLIVGVTSLIALVPHARAQRVRVGQGLLFGALGT 84

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF--------------- 153
             +   S + SHV    L   FA   L++ ++ML R R   +                  
Sbjct: 85  GGSFAGSALASHVAPQVLLSGFAGLMLVVALIMLARARHVADGSAASDPSVEPILTLRPL 144

Query: 154 ----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
               P      +     G L+G  GVGGG      ++   G  +  A  TS  V A+ + 
Sbjct: 145 SCACPRAAKVVVTATAVGLLTGFFGVGGGFLLVPALILAMGFPMPVAVGTSLLVIAVNSG 204

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            AL+ R   G             ++   + +    +I+ + +  +L+  +   +L   F+
Sbjct: 205 TALVARASVGGTN----------LDWPLIAMFTAAAIVGSLIGGRLASRVTPAHLARAFA 254

Query: 269 MIMFTTSFVFA 279
           +++   +   A
Sbjct: 255 VLLIAVAMYTA 265



 Score = 43.9 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 41/95 (43%), Gaps = 2/95 (2%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG--TINMKILKDWIFVLPITTVVT 114
             + +     M VA+GTSL VIA  S  + +     G   ++  ++  +     + +++ 
Sbjct: 178 PALILAMGFPMPVAVGTSLLVIAVNSGTALVARASVGGTNLDWPLIAMFTAAAIVGSLIG 237

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
             + S V  + L +AFA+  + + +    R   + 
Sbjct: 238 GRLASRVTPAHLARAFAVLLIAVAMYTAARSIPHL 272


>gi|254507862|ref|ZP_05119992.1| permease with 5 transmembrane domains [Vibrio parahaemolyticus 16]
 gi|219549235|gb|EED26230.1| permease with 5 transmembrane domains [Vibrio parahaemolyticus 16]
          Length = 259

 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 78/199 (39%), Gaps = 16/199 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  +     R+G +++K ++  I    I + V +  + ++D   L   
Sbjct: 46  ALATNKLQSSFGSFSASWYFIRNGIVSIKEMRLAIACTFIGSAVGAEAVQYIDAGVLTSL 105

Query: 130 FAIFCLLMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
             I  + + +  L   +      E K  +    +  G   GF  G  G G G    +  +
Sbjct: 106 IPILLVAISLYFLLMPKTKQHSGEAKVSEAMFAFSVGGGVGFYDGFFGPGTGSIFTVCFV 165

Query: 187 FYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
            +G  S+  ATA +  ++      ALL  I +G     LP W LG       L++     
Sbjct: 166 AFGHFSLVDATARTKVLNFTSNIAALLFFILAG-----LPVWELG-------LVMAIGGF 213

Query: 246 LITPLATKLSYMIGKKYLT 264
           +   L  K+    G+K++ 
Sbjct: 214 MGAQLGAKVVVTKGQKWIR 232


>gi|82703794|ref|YP_413360.1| hypothetical protein Nmul_A2681 [Nitrosospira multiformis ATCC
           25196]
 gi|82411859|gb|ABB75968.1| Protein of unknown function DUF81 [Nitrosospira multiformis ATCC
           25196]
          Length = 325

 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 86/253 (33%), Gaps = 23/253 (9%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +  F +  + G  G+  G+     L  +    G+  +  +H+A          T+ +S 
Sbjct: 86  AIVGFFAQVVDGALGMAYGVTATTFLLASGATPGVASA-SVHIAE-------IFTTGVSG 137

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR-- 144
           + H + G +N  +    +    + +++ +++++ VD +      +++ LL+GI +L +  
Sbjct: 138 ISHVKFGNVNKDLFVRLLVPGILGSILGAVLVTQVDGALFKPYVSVYLLLLGIYILSKAF 197

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
             L   +  P +  K       GF+  A G G G      ++  G        +      
Sbjct: 198 RSLRLRKNPPKHVGKLAL--FGGFVDAAGGGGWGPVVTSTLVSTGNDPRTTIGSVNFAEF 255

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
            +      V                       +  ++   +   P A  L   +  K L 
Sbjct: 256 FLTLTGAAVFTLLMETNT-----------WPIIAGLVFGGLFAAPFAAVLCKKLHAKTLL 304

Query: 265 IGFSMIMFTTSFV 277
           I    ++  TS  
Sbjct: 305 ILVGSLIMITSLY 317


>gi|172038384|ref|YP_001804885.1| hypothetical protein cce_3471 [Cyanothece sp. ATCC 51142]
 gi|171699838|gb|ACB52819.1| hypothetical protein cce_3471 [Cyanothece sp. ATCC 51142]
          Length = 260

 Score = 55.5 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 77/244 (31%), Gaps = 35/244 (14%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L            +    A+  SLG++   S++  + H   G +N  +   +     
Sbjct: 30  VPILVYVM-------GLGAKTAIAMSLGIVGTVSLVGAIPHWLQGNVNWPVAVIFAPTAM 82

Query: 109 ITTVVTSLMIS--HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP------------ 154
           +   + + M S   + ++     FA+  +L  ++M+++       +              
Sbjct: 83  LGAYLGARMASFDFITETLQLICFALVMVLASLMMIRQGGKRLNNQSSIKEKDSLQHQNQ 142

Query: 155 -DNYVKYIWGMVTGFLS-GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            +     + G+  G L+      GG      L+L  G  + +A  TS  +    +    L
Sbjct: 143 HNWLFILLEGLGVGILTGFVGVGGGFAIIPALVLLGGLPMKEAIGTSLIIITFKSMTGFL 202

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
                         W L       ++     + L T     L+  I  K L   F   + 
Sbjct: 203 GYF-----SQVNFDWML-------MISFAIAASLGTLTGAYLTRFIEAKNLQKAFGYFVL 250

Query: 273 TTSF 276
               
Sbjct: 251 AVGI 254



 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I++     G L+G  GVGGG  ++P L            + M  A+GTSL +I   S+
Sbjct: 146 LFILLEGLGVGILTGFVGVGGGFAIIPALVLL-------GGLPMKEAIGTSLIIITFKSM 198

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
             F+ +      +  ++  +     + T+  + +   ++   L KAF  F L +GI +L 
Sbjct: 199 TGFLGYFSQVNFDWMLMISFAIAASLGTLTGAYLTRFIEAKNLQKAFGYFVLAVGIFVLI 258

Query: 144 R 144
           R
Sbjct: 259 R 259


>gi|251781268|ref|ZP_04824184.1| transporter [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243081715|gb|EES47776.1| transporter [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 249

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 106/263 (40%), Gaps = 23/263 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + +I    FL+G +  + G GGG++ +P    A         I +H+A GT+     
Sbjct: 1   MEILLIICPLVFLAGIIDAVAG-GGGIISLPAYIFA--------GIPIHIAYGTNKFASC 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             + +S ++  R G I +K          I +   + ++  +++ +LN    I   ++ +
Sbjct: 52  IGTSISSIKFFRSGNIKIKPALLSAAGALIGSWFGAQIVLLLNEKYLNYCLIIILPIVSL 111

Query: 140 LMLKRDRLYCERKFPDN-----YVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIY 193
            +L       + K   +      + +I G++ G   G  G G G F  +      G ++ 
Sbjct: 112 FLLFNRSFGVKNKKELSNKKLYILSFIIGLLLGAYDGFFGPGTGTFLVICFTGILGFNLI 171

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+  +  V+    F AL+  I  G  +     +S+G   + A +  +  + L   LA K
Sbjct: 172 TASGNAKIVNLASNFSALIAYILGGKVM-----FSIG---VPAAVCAIAGNYLGAHLAIK 223

Query: 254 LSYMIGKKYLTIGFSMIMFTTSF 276
               I K  + +   ++     F
Sbjct: 224 NGDKIIKPIIFVAIGLLFIKVIF 246


>gi|77459679|ref|YP_349186.1| hypothetical protein Pfl01_3457 [Pseudomonas fluorescens Pf0-1]
 gi|77383682|gb|ABA75195.1| putative membrane protein [Pseudomonas fluorescens Pf0-1]
          Length = 266

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/284 (15%), Positives = 92/284 (32%), Gaps = 50/284 (17%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L  +   + G + GL G GGG++ VP L              M  A   +L  +   +
Sbjct: 1   MLLASLFGVVMGLILGLTGAGGGILAVPALVLGLGW-------TMTQAAPVALFAVGSAA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  ++  RHG +  +       +  + + V       + +  L   F++  +++   ML
Sbjct: 54  AVGAIDGLRHGLVRYRAALLIAALGAVFSPVGIYFAHQLPEKVLMILFSLLMVMVAWRML 113

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFL--------------SGALGVGGGI--------- 179
           +R+R       P ++    WG     L              +    +G            
Sbjct: 114 RRERQQEG---PSDHGHASWGQKNCMLNEQTGRFDWTAKCTATLAALGAVTGVVSGLLGV 170

Query: 180 -----FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
                            +    ATS  V +LI+   ++   ++G  ++ L          
Sbjct: 171 GGGFLIVPAFKQLTDVQMRGIVATSLMVISLISAIGVIGAFHAGVRIDHLG--------- 221

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 +  SI+   +  KL   +  + L +GF+ +    +   
Sbjct: 222 ---ASFIVASIVGMIIGRKLCARVPARTLQVGFASVCLVVAAYM 262



 Score = 38.9 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 32/81 (39%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + M   + TSL VI+  S +  +     G     +   +I    +  ++   + + V  
Sbjct: 185 DVQMRGIVATSLMVISLISAIGVIGAFHAGVRIDHLGASFIVASIVGMIIGRKLCARVPA 244

Query: 124 SFLNKAFAIFCLLMGILMLKR 144
             L   FA  CL++   ML R
Sbjct: 245 RTLQVGFASVCLVVAAYMLLR 265


>gi|16330448|ref|NP_441176.1| hypothetical protein slr1262 [Synechocystis sp. PCC 6803]
 gi|1652938|dbj|BAA17856.1| slr1262 [Synechocystis sp. PCC 6803]
          Length = 288

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 88/247 (35%), Gaps = 41/247 (16%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L    Q       +    A+  +L ++   S++  + H   G +N+     +     +
Sbjct: 31  PILVYVMQ-------VPPKAAIAMTLVIVGAVSLIGVIPHWHRGNVNLPKALIFGSATMV 83

Query: 110 TTVVTSLMIS--HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY---------- 157
                + + +   V ++F    FA+  L+  I M+++ +   +    ++           
Sbjct: 84  GAFGGAKLAALPLVTETFQLILFAVLMLVAAIFMIRKAQQRPQLSSTEDPDLATYPAPIC 143

Query: 158 -----VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPAL 211
                     G+  G L+G +GVGGG      ++  G   + +A  TS  + A  +    
Sbjct: 144 KYCWLWLLTEGIAIGVLTGLVGVGGGFAIVPALVLLGKLPMKEAIGTSLLIIAFNSVAGF 203

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI--SILITPLATKLSYMIGKKYLTIGFSM 269
           L                 G V++   L++     + L   L + LS  +  K L  GF+ 
Sbjct: 204 LGY--------------FGQVSLDYHLMVSFTFFAALGILLGSYLSSFVDAKNLQKGFAY 249

Query: 270 IMFTTSF 276
            +   + 
Sbjct: 250 FLMAIAA 256



 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 7/101 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
             +VP L            + M  A+GTSL +IA  SV  F+ +    +++  ++  + F
Sbjct: 170 FAIVPALVLL-------GKLPMKEAIGTSLLIIAFNSVAGFLGYFGQVSLDYHLMVSFTF 222

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
              +  ++ S + S VD   L K FA F + +   +L + R
Sbjct: 223 FAALGILLGSYLSSFVDAKNLQKGFAYFLMAIAAFILFQQR 263


>gi|159898165|ref|YP_001544412.1| hypothetical protein Haur_1641 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159891204|gb|ABX04284.1| protein of unknown function DUF81 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 252

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 101/259 (38%), Gaps = 21/259 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L ++     G   G+ G GG ++ VP L            +  H A  +SL ++ 
Sbjct: 3   ISLIVLALLVGASIGLTLGMLGGGGSILTVPALVYVL-------GLSAHDATTSSLVIVG 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +      + R G   ++    +  +      + + +  ++ + +L   F    L++G 
Sbjct: 56  LNAAFGAWLNCRRGPCMLRHAFVFGGIGLGAAFLGARVSQYIPEVWLLTMFGSLMLIIGS 115

Query: 140 LMLK-RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           +ML+ + +   + +        + G+  GFL+G LGVGGG      L+L     +  A +
Sbjct: 116 MMLRPKVQAKTDEQAIAWPAVVMGGLGVGFLTGFLGVGGGFLIVPALVLLLHMPMRTAIS 175

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +S  V AL +   +L  +           W+L       + +I+   ++   L T+ +  
Sbjct: 176 SSLIVIALNSSAGILGHL-----QGSHFDWTL-------IGLIISGGVIGNLLGTRFAQK 223

Query: 258 IGKKYLTIGFSMIMFTTSF 276
           +  + L   F+  +     
Sbjct: 224 VQVQTLQRSFAFFVIALGI 242



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 7/122 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++     G L+G  GVGGG ++VP L            + M  A+ +SL VIA  S   
Sbjct: 136 VVMGGLGVGFLTGFLGVGGGFLIVPALVLLLH-------MPMRTAISSSLIVIALNSSAG 188

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + H +    +  ++   I    I  ++ +     V    L ++FA F + +GI ++ ++
Sbjct: 189 ILGHLQGSHFDWTLIGLIISGGVIGNLLGTRFAQKVQVQTLQRSFAFFVIALGIFLVIKN 248

Query: 146 RL 147
             
Sbjct: 249 FP 250


>gi|169628204|ref|YP_001701853.1| hypothetical protein MAB_1110 [Mycobacterium abscessus ATCC 19977]
 gi|169240171|emb|CAM61199.1| Conserved hypothetical protein [Mycobacterium abscessus]
          Length = 263

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 80/211 (37%), Gaps = 8/211 (3%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++++   L+G  + LFG GGG V VPV+  A   +G              + V A  +
Sbjct: 1   MLVLVLIGILAGLTTVLFGFGGGFVTVPVIVWADGALGAAAPAVAVATSAVVMVVNAAAA 60

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +          +++     + +L     + + +            F  + ++    +L
Sbjct: 61  TAATSR---ATLAHLRSAVPLVALLGCGGALGAGLARLAPPQLTTWGFVGYLVITIADVL 117

Query: 143 KRDRLYCERKFPDNY-----VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            R          D       +    G+  G  +  LGVGG + T  L+   G  +  ATA
Sbjct: 118 LRPGFLRPPAVIDGPRREFAIPAGLGIPIGATASFLGVGGSVMTVPLLRRGGQPMSVATA 177

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
            +  ++  I+ PAL V + S   + G P ++
Sbjct: 178 LANPLTLAISVPALAVFLTSTAAVAGEPYFA 208


>gi|303245738|ref|ZP_07332021.1| protein of unknown function DUF81 [Desulfovibrio fructosovorans JJ]
 gi|302493001|gb|EFL52866.1| protein of unknown function DUF81 [Desulfovibrio fructosovorans JJ]
          Length = 381

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 8/119 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V   +   ++   GVGGG ++VP L+   QL        M++A GTS   +    + S 
Sbjct: 263 FVGGIIIAAVAAFLGVGGGFLLVPFLTNVAQL-------PMYLAAGTSALAVLVGMITSI 315

Query: 87  MEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                 G  I+  ++   +  + + +V+      ++   +L + F I  L +G   + R
Sbjct: 316 TTFMSGGVAIHWHLIGIELLGIVLGSVIGPRTSKYIPDIWLKRLFIILALYVGSRYVLR 374



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 47/125 (37%), Gaps = 12/125 (9%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLV 213
           +  + ++ G++   ++  LGVGGG      +       +Y A  TSA    +    ++  
Sbjct: 258 NPLIPFVGGIIIAAVAAFLGVGGGFLLVPFLTNVAQLPMYLAAGTSALAVLVGMITSITT 317

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            +  G  ++      +G      +L I+  S+    +  + S  I   +L   F ++   
Sbjct: 318 FMSGGVAIH---WHLIG----IELLGIVLGSV----IGPRTSKYIPDIWLKRLFIILALY 366

Query: 274 TSFVF 278
               +
Sbjct: 367 VGSRY 371


>gi|78355645|ref|YP_387094.1| hypothetical protein Dde_0598 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218050|gb|ABB37399.1| hypothetical protein Dde_0598 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 404

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 48/120 (40%), Gaps = 9/120 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +  F    ++   GVGGG ++VP L+           + M++  GTS   +    V S 
Sbjct: 281 AIGGFFIAGMASFLGVGGGFLLVPFLTSV-------AGLPMYLVAGTSALAVLIGMVTSI 333

Query: 87  MEHRRHGT--INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +   G   +  +++   +  + + + +      ++   +L + F +    +GI  + +
Sbjct: 334 TTYMLAGGTPVFWQLIGVELVGILVGSFIGPRTSKYIPDVWLKRIFIVLAFYVGIRYVTK 393



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLV 213
           +  V  I G     ++  LGVGGG      +    G  +Y    TSA    +    ++  
Sbjct: 276 NPMVPAIGGFFIAGMASFLGVGGGFLLVPFLTSVAGLPMYLVAGTSALAVLIGMVTSITT 335

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            + +G             V    + + L   ++ + +  + S  I   +L   F ++ F 
Sbjct: 336 YMLAGGTP----------VFWQLIGVELVGILVGSFIGPRTSKYIPDVWLKRIFIVLAFY 385

Query: 274 TSFVF 278
               +
Sbjct: 386 VGIRY 390


>gi|317179378|dbj|BAJ57166.1| hypothetical protein HPF30_1069 [Helicobacter pylori F30]
          Length = 277

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 75/215 (34%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G +++K          +  V+ S ++  +D   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLKEGSFAALGGLMGAVLGSFILKIIDDKILMAVFVVVVCYTFIKYAFS 119

Query: 145 DRLYCE-------------------RKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
           +    E                   R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 NNKKPEHFEEMHFDLHANNKTPEKKRPIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|260775355|ref|ZP_05884252.1| hypothetical protein VIC_000727 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608536|gb|EEX34701.1| hypothetical protein VIC_000727 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 259

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 79/212 (37%), Gaps = 16/212 (7%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  +     R+G +++K ++  I    I + + +  + ++D S L   
Sbjct: 46  ALATNKLQSSFGSFSASWYFVRNGIVSIKEMRLAILCTFIGSAIGAEAVQYIDASTLTSL 105

Query: 130 FAIFCLLMGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             I  + + +  L   +        K  +       G   GF  G  G G G IFT   +
Sbjct: 106 IPILLVAISLYFLLMPKTKQHSGQAKLSEAMFALSVGGGVGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                S+  ATA +  ++      ALL  + +G     LP W LG       L++     
Sbjct: 166 AIGHFSLVDATARTKVLNFTSNIAALLFFVLAG-----LPIWELG-------LVMAVGGF 213

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               +  K+    G+K +     ++    +F 
Sbjct: 214 FGARMGAKVVVNKGQKLIRPLVIVMSMAMAFK 245


>gi|305432260|ref|ZP_07401423.1| inner membrane protein YfcA [Campylobacter coli JV20]
 gi|304444608|gb|EFM37258.1| inner membrane protein YfcA [Campylobacter coli JV20]
          Length = 254

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 91/263 (34%), Gaps = 28/263 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y  ++   +  +G +  + G GGGL+ +P L            I  H+++ T+       
Sbjct: 10  YYFVLFFVALFAGFIDSIVG-GGGLITLPALIAC--------GIPAHLSLATNKLQSVFG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC----LLM 137
           S  + + + +  T  +  L   IF   +   + S  +  V    L     IF     L  
Sbjct: 61  SFTATLTYFKSTT--LPHLAYGIFFTALGAAIGSYSVLFVKDEHLKLIILIFLTLTFLYT 118

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
            +           +     +   I G+  GF  G LG G G F     +   G ++ KA+
Sbjct: 119 ALRPSLGKHESEAKIKNIKFFHLICGLTLGFYDGFLGPGTGSFWIFACVMLLGFNMKKAS 178

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++      AL + +   W    L             L++    IL   L +KL  
Sbjct: 179 INTKILNFTSNVVALFIFL---WQYELL---------WIVGLLMGVGQILGAYLGSKLVL 226

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
               K++   F +++  T    A
Sbjct: 227 KTNGKFIKTLFLIVVGATIIKVA 249


>gi|206890428|ref|YP_002248551.1| hypothetical protein THEYE_A0709 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206742366|gb|ACI21423.1| membrane protein, putative [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 422

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 104/304 (34%), Gaps = 74/304 (24%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I     +G ++G  G GGG ++ P L        +   +   +A+GT    I   ++M  
Sbjct: 78  IAVGLAAGLITGCIGAGGGFIIAPAL--------MAAGVKGILAVGTDQFHIFAKAIMGT 129

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-------DKSFLNKAFAIFCLLMGI 139
           + H++ G + + +   ++    +       +   +        ++F++  +AI    +G 
Sbjct: 130 VIHKKLGNVCVGLAVAFVIGSVLGATTGGYIQRTIYNWDPVASEAFISIVYAIILGFLGF 189

Query: 140 LMLK------------------------------------------RDRLYCERKFPDNY 157
             L+                                             +  +  F    
Sbjct: 190 YGLRDYIKLSKARKKGVQAGGDAHGDAHGGPMTTTKLALNIQKINIPPMINFDEDFGGRR 249

Query: 158 VKYIW----GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
           + +++    G + G L+  +GVGGG  T  L ++             GVS        ++
Sbjct: 250 ISWLFVAMCGFLVGLLAAVMGVGGGFVTFPLFVYV-----------LGVSTPTTVGTDIL 298

Query: 214 RIYSGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           +I    G + +  +++ G+V     + +L  S++   +    + ++    +  GF ++  
Sbjct: 299 QIIFTAGYSSISQYAIYGYVFYTLAMGLLLGSLIGIQIGALTTKVVPGMVI-RGFWVLTI 357

Query: 273 TTSF 276
              F
Sbjct: 358 LAGF 361



 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 10/132 (7%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVA--SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           N   M+   +D     I  + VA   FL G L+ + GVGGG V  P+             
Sbjct: 234 NIPPMINFDEDFGGRRISWLFVAMCGFLVGLLAAVMGVGGGFVTFPLFVYVL-------G 286

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           +     +GT +  I  T+  S +     +G +   +    +    I   + +L    V  
Sbjct: 287 VSTPTTVGTDILQIIFTAGYSSISQYAIYGYVFYTLAMGLLLGSLIGIQIGALTTKVVPG 346

Query: 124 SFLNKAFAIFCL 135
             +   + +  L
Sbjct: 347 MVIRGFWVLTIL 358


>gi|225163757|ref|ZP_03726057.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
 gi|224801627|gb|EEG19923.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
          Length = 280

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 80/250 (32%), Gaps = 40/250 (16%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
             + +   + +  A+  S+  +  TS  +   + R    N+++         +  +  + 
Sbjct: 34  PALTLLMGVDIQHAIAASIVAVVATSSGAASSYVRERITNIRLAMVMEIATAVGAICGAF 93

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY------------------- 157
           +   V   +L   F +        M ++ + +     PD                     
Sbjct: 94  LAVVVSGRWLFLLFGLVLCYTAWSMSRKSQGHLREPVPDALADRLRLHSSYYDRSLKQEI 153

Query: 158 --------VKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAF 208
                   +  +   V G +SG LG+GGG+    +M    G  I   TATS  +  + A 
Sbjct: 154 SYRVSRTRLGLVVSYVAGVVSGLLGIGGGVLKVPVMNLAMGLPIKVCTATSNFMIGVTAA 213

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            +  V    G            F+     + +    ++   +  +L   +  + +   F 
Sbjct: 214 ASAAVYFMRGDVKP--------FIAAPVAVGV----LVGARIGARLLGRLKGEVIKRAFV 261

Query: 269 MIMFTTSFVF 278
           +++  ++   
Sbjct: 262 IVLAVSALQM 271



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 33/86 (38%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            +M +   + + V   TS  +I  T+  S   +   G +   I       + +   + + 
Sbjct: 187 PVMNLAMGLPIKVCTATSNFMIGVTAAASAAVYFMRGDVKPFIAAPVAVGVLVGARIGAR 246

Query: 117 MISHVDKSFLNKAFAIFCLLMGILML 142
           ++  +    + +AF I   +  + ML
Sbjct: 247 LLGRLKGEVIKRAFVIVLAVSALQML 272


>gi|330469218|ref|YP_004406961.1| hypothetical protein VAB18032_26315 [Verrucosispora maris
           AB-18-032]
 gi|328812189|gb|AEB46361.1| hypothetical protein VAB18032_26315 [Verrucosispora maris
           AB-18-032]
          Length = 322

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 67/204 (32%), Gaps = 14/204 (6%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T++ +   H R G ++ +++        +     +  +S +         A     +G
Sbjct: 52  IGTTLAAGTAHWRFGNVDWRVVTRIAIPGAVGAFAGATFLSSLSTEAAAPWMAAILFTLG 111

Query: 139 ILMLKRDRLYCERKF----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIY 193
             +L R      R               G+V GF+    G G G      +L  G     
Sbjct: 112 AYLLVRFSRPLRRNPAAGQLRGRFLGPLGLVAGFVDATGGGGWGPVATPALLVSGRMEPR 171

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           K   +      L+A  A L  +            + GF+ +  VL +L   ++  P+A  
Sbjct: 172 KVIGSVDTSEFLVAVSASLGFLIG--------LGTEGFL-LPIVLALLIGGLIAAPIAAW 222

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           L  ++  + L      ++  T+  
Sbjct: 223 LVRIVPAQMLGAAVGGVIVLTNAR 246


>gi|284167508|ref|YP_003405786.1| hypothetical protein Htur_4296 [Haloterrigena turkmenica DSM 5511]
 gi|284017163|gb|ADB63113.1| protein of unknown function DUF81 [Haloterrigena turkmenica DSM
           5511]
          Length = 346

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 7/123 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++  +F +G LSG  GVGGG + +P +            + + VA+GT L  I  + 
Sbjct: 182 LWMVLGVAFATGLLSGFLGVGGGFIRMPAMFYLI-------GVPVPVAVGTDLFEIVFSG 234

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +    +   G +++ I+   +    +   + S     VD+  +   F +  L   I + 
Sbjct: 235 GIGSFLYGMEGGVDLSIVAPLLAGSALGARIGSAATGIVDEGDIKIYFGLMLLGGSIAVA 294

Query: 143 KRD 145
            R 
Sbjct: 295 FRQ 297



 Score = 41.6 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 54/307 (17%), Positives = 103/307 (33%), Gaps = 67/307 (21%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L +   F+ G L G FG+GG  ++ P L                VA+G+ +  + 
Sbjct: 8   LATLVLFVSFGFMVGVLFGFFGMGGSFLVTPALLVM--------GYPARVAVGSGMAFVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------------SFLN 127
            T+V++ ++H   G ++ K+    I    +   +  + + ++++              L 
Sbjct: 60  GTAVIATLKHHDLGQVDYKLGGLMIVGTSVGIEIGRIGVFYLEELGLASGVIGVTYVVLL 119

Query: 128 KAFAIFCLLMGILM---------------------LKRDRLYCERKFPDNYVKYIWGMV- 165
            A  +F     +                          D     + +    +  I G + 
Sbjct: 120 GAIGVFVTRNALRNDGADDSGGGHHDAANEEIDPDAIPDIAKKIQAYRVPPMMTIAGGIQ 179

Query: 166 ------------TGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALL 212
                       TG LSG LGVGGG      M +  G  +  A  T       I F   +
Sbjct: 180 VSLWMVLGVAFATGLLSGFLGVGGGFIRMPAMFYLIGVPVPVAVGTDL---FEIVFSGGI 236

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
                G           G V++  V  +L  S L   + +  + ++ +  + I F +++ 
Sbjct: 237 GSFLYGME---------GGVDLSIVAPLLAGSALGARIGSAATGIVDEGDIKIYFGLMLL 287

Query: 273 TTSFVFA 279
             S   A
Sbjct: 288 GGSIAVA 294


>gi|332158692|ref|YP_004423971.1| Predicted permease [Pyrococcus sp. NA2]
 gi|331034155|gb|AEC51967.1| Predicted permease [Pyrococcus sp. NA2]
          Length = 243

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 92/249 (36%), Gaps = 26/249 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L I    L G L GL GVGGG +M P L     L+G++ +    +A+GT L     T 
Sbjct: 1   MILFIFLGLLVGFLVGLTGVGGGALMTPSLI----LLGVEPT----IAVGTDLLYSTVTR 52

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD----KSFLNKAFAIFCLLMG 138
           ++  + H + G + + I+   +       ++ S ++  +       +L     I  ++  
Sbjct: 53  IVGGIFHYKKGNLRLDIVLKLLSGGIPAILIGSFVLRRIPRDIVNEYLTIFLGIILIITS 112

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATA 197
            L L    +    K       Y+ G + G       VG G+  + +LM        +   
Sbjct: 113 ALSLLNLEINLPVKN-RPMYLYLLGFIVGLTIQFTSVGAGVIVSFVLMNVMKLDPREVVG 171

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +      I+  + L  +            +L  +N      ++  ++    L T L+  
Sbjct: 172 VAIFYGLAISSLSFLNYL------------ALRLINYNLAFALIIGTVPGVYLGTHLNNA 219

Query: 258 IGKKYLTIG 266
           I +K L   
Sbjct: 220 IERKKLRRI 228


>gi|167619874|ref|ZP_02388505.1| hypothetical protein BthaB_26447 [Burkholderia thailandensis Bt4]
          Length = 268

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 97/276 (35%), Gaps = 40/276 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V   + G + GL G GGG++ VP L        +     M  A   +L  +A ++
Sbjct: 1   MLISLVLGSIVGAVLGLTGAGGGILAVPTLV-------VGMGWPMQQATPVALVAVAGSA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +E  R G +  +            T +   +   + +  L   FA+  +++ + +L
Sbjct: 54  ALGALEGFRRGLVRYRAALLMAAAGVPLTTLGVRLAHVLPQRVLLALFALVMMIVAVRLL 113

Query: 143 KRDRLYCERKFPDNY----------VKYIWGMVTGFLSGALGVGGG------------IF 180
           ++   +  R+   +            + +W    G    + G   G            + 
Sbjct: 114 RQALRHAAREPARSPLCVGRIDPDTGRLVWSWAAGIALASTGALTGLMTGLLGVGGGFVI 173

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             +L  F   +++   ATS  V AL+    ++  I SG               +   L  
Sbjct: 174 VPMLRKFTNVTMHGIVATSLMVIALVGTGGVIATIVSGTPAP-----------LDVTLWF 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              + L       +S  +  +++ +GF+  +   + 
Sbjct: 223 TVTTALGMAAGRWVSRYLSARHVQLGFAAALVCVAA 258



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 50/122 (40%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G + G + G  G GGGI     ++   G  + +A          +A  A+    
Sbjct: 2   LISLVLGSIVGAVLGLTGAGGGILAVPTLVVGMGWPMQQA--------TPVALVAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +  G V   A L++    + +T L  +L++++ ++ L   F+++M   +
Sbjct: 54  ALG----ALEGFRRGLVRYRAALLMAAAGVPLTTLGVRLAHVLPQRVLLALFALVMMIVA 109

Query: 276 FV 277
             
Sbjct: 110 VR 111


>gi|90021939|ref|YP_527766.1| hypothetical protein Sde_2294 [Saccharophagus degradans 2-40]
 gi|89951539|gb|ABD81554.1| protein of unknown function DUF81 [Saccharophagus degradans 2-40]
          Length = 279

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 95/283 (33%), Gaps = 43/283 (15%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +V   + G + GL G GG +  VP+L        ++ S  M +A+G ++ V A  +  S 
Sbjct: 4   VVVGLIIGLVLGLTGAGGSIFAVPLL---LLATPMNPSDAMGMALG-AVAVTALYATASQ 59

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             +R++  I             +T  +     +      L   F    +L+ + M  +  
Sbjct: 60  SINRKNSGILWTPAIILAASGALTAPLGKWASTLFTPHVLLAGFTCVAVLIAVRMWIQAN 119

Query: 147 LYCERKFPDNY-------------------------------VKYIWGMVTGFLSGALGV 175
              E                                         + G+  GF SG  GV
Sbjct: 120 RRPEETTSVRANDGDSDLTTPATMACKLSPTGQFLLRPKCISGLGVGGLAIGFASGLFGV 179

Query: 176 GGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           GGG     L+LF    ++  A ATS  + A ++       +   +  N    W    +N 
Sbjct: 180 GGGFLIIPLLLFLSQIAMRNAVATSLAIIAAVSSSGFASHLVLEYSNNQTFDW----LNF 235

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             +      ++ I+    ++S  I    L   FS+ +   S +
Sbjct: 236 IKLSGASLTAMFISQ---RISRAIAGPLLQKIFSVALVLVSVI 275



 Score = 35.4 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 44/122 (36%), Gaps = 10/122 (8%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIY 216
           ++ + G++ G + G  G GG IF   L+L     +   A   + G  A+ A  A   +  
Sbjct: 2   IEVVVGLIIGLVLGLTGAGGSIFAVPLLLLATPMNPSDAMGMALGAVAVTALYATASQSI 61

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           +            G +   A +I+     L  PL    S +     L  GF+ +    + 
Sbjct: 62  NRKNS--------GILWTPA-IILAASGALTAPLGKWASTLFTPHVLLAGFTCVAVLIAV 112

Query: 277 VF 278
             
Sbjct: 113 RM 114


>gi|292655515|ref|YP_003535412.1| hypothetical protein HVO_1361 [Haloferax volcanii DS2]
 gi|291372839|gb|ADE05066.1| Domain of unknown function, putative [Haloferax volcanii DS2]
          Length = 347

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 8/125 (6%)

Query: 6   YNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSI 65
           Y+   M+ L     V  + +I++ +F +G LSG  GVGGG + +P L            +
Sbjct: 167 YSLPPMITLRGGVKVS-LWMILLLAFATGLLSGFLGVGGGFIRMPALFYLI-------GV 218

Query: 66  CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
            + +A+GT L  I  +  +    + + G +++ I+   +    +   V S   S VD+  
Sbjct: 219 PVPIAVGTDLFEIMFSGGIGSFLYAQSGGVDLSIVAPLLAGSALGARVGSAATSIVDEDE 278

Query: 126 LNKAF 130
           +   F
Sbjct: 279 IKIYF 283



 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 52/291 (17%), Positives = 94/291 (32%), Gaps = 65/291 (22%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + L +    L G L G FG+GG  ++ P L                VA+G+ L  +  T
Sbjct: 13  MLALFVAFGVLIGVLFGFFGMGGSFLVTPALLVM--------GYPSRVAVGSGLAFVFGT 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------------SFLNKA 129
           SV++ ++HR  G ++ K+    I    +   V   ++ ++++              L   
Sbjct: 65  SVIATLKHRDLGQVDYKLGISMIIGTTVGLEVGKEIVLYLEELGLAGNIISVTYVLLLGG 124

Query: 130 FAIFCLLMGIL------------------------MLKRDRLYCERKFP--------DNY 157
             +F     +                         + K+ + Y                +
Sbjct: 125 IGLFVTYEALKGGDGGGVSHDVDGDADIDADDIPELAKKIQSYSLPPMITLRGGVKVSLW 184

Query: 158 VKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           +  +    TG LSG LGVGGG      L    G  +  A  T              +   
Sbjct: 185 MILLLAFATGLLSGFLGVGGGFIRMPALFYLIGVPVPIAVGTDLFEIMFSGGIGSFLYAQ 244

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
           SG             V++  V  +L  S L   + +  + ++ +  + I F
Sbjct: 245 SGG------------VDLSIVAPLLAGSALGARVGSAATSIVDEDEIKIYF 283


>gi|256419285|ref|YP_003119938.1| hypothetical protein Cpin_0237 [Chitinophaga pinensis DSM 2588]
 gi|256034193|gb|ACU57737.1| protein of unknown function DUF81 [Chitinophaga pinensis DSM 2588]
          Length = 335

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 87/268 (32%), Gaps = 33/268 (12%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +   I+    + T+ G  G+  G       S     +GI  S    VA  +       T+
Sbjct: 80  LLFYILVGLAAQTVDGALGMAYGATS----SSLLLGLGIPPS----VASASVHVAEVFTT 131

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-------------SFLNKA 129
             S + H R G +N K+    +    I ++  S +IS+++                +   
Sbjct: 132 GASGISHFRFGNVNKKLFLYLLVPGIIGSIAGSFLISNMNAISSAVPFLSYFTEENVKPF 191

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            + + L++G  ++ R     ++               GF+    G G G      +L  G
Sbjct: 192 ISAYLLILGA-IVLRKAFLPKKAKSKTKRLGSLAFFGGFMDSFGGGGWGPIVTSTLLSKG 250

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
            S +    +       I+  +    +  G                  ++ ++   ++ +P
Sbjct: 251 RSAHYTIGSVNAAEFFISLSSAGTFLIFGAIAG-----------WPVIIGLIIGGVIASP 299

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            A  L   I +K L I    ++   S  
Sbjct: 300 FAAVLVRKIKRKPLMIMVGTLIILLSLR 327


>gi|254524470|ref|ZP_05136525.1| hypothetical protein SSKA14_3609 [Stenotrophomonas sp. SKA14]
 gi|219722061|gb|EED40586.1| hypothetical protein SSKA14_3609 [Stenotrophomonas sp. SKA14]
          Length = 253

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 83/240 (34%), Gaps = 20/240 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
               I+    +  + G  G+  GLV     S     MGI  +     A+ T+      T+
Sbjct: 7   FWWFILIGLGAQLVDGALGMAFGLVS----SSVMLAMGIPPAQA-SAAIHTAE---VFTT 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H   G ++ ++         +   V +  ++ +    +     ++ L++ I++L
Sbjct: 59  GASGVSHLVAGNVDKRLFLRLALPGAVGGAVGAYGLTQLPGEVIRPLIYLYLLVLAIIIL 118

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            R       K     V  + G V GFL  + G G G      +L  G        T    
Sbjct: 119 ARAAGRLMPKGEVKRVP-VLGFVAGFLDASGGGGWGPVATSTLLARGGQARTTIGTVNAA 177

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
             ++        +            S+G  ++  V  +L   ++  P+A  L   + +++
Sbjct: 178 EFVVTLTVSATFLL-----------SMGLHHLQIVAGLLIGGMMAAPVAALLVKRLKERW 226


>gi|241664785|ref|YP_002983145.1| hypothetical protein Rpic12D_3206 [Ralstonia pickettii 12D]
 gi|240866812|gb|ACS64473.1| protein of unknown function DUF81 [Ralstonia pickettii 12D]
          Length = 252

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 97/263 (36%), Gaps = 25/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L+ VA FL+G +  + G GGGLV +P L  A+       +I     +GT+       +
Sbjct: 3   FALLAVAGFLAGLIDAVAG-GGGLVQIPALFSAY------PNIVPATLIGTNKVASMSGT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + + + R   I        +    + +++ +  ++H+    L +A      ++ +  +
Sbjct: 56  ATAAVRYGRTVRIYWGATAPAVVTAFMFSLLGAWALTHIPAEPLRRALPFVLAVLLVYTV 115

Query: 143 KRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +  L  +         +     + G   GF  G  G G G     + +  +G     A+
Sbjct: 116 AKKNLGADHAPSLKGWRERAAALLAGAAIGFYDGVFGPGTGSFLMIVFVRVFGYDFLHAS 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A++  V+      ALL+                G V     L++   ++    + + L+ 
Sbjct: 176 ASTKIVNLATNVAALLLLAAK------------GHVWWQLGLVMAVANVAGNQVGSHLAL 223

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G +++   F +++       A
Sbjct: 224 RHGSRFVRKVFIVVVLALILKTA 246


>gi|269960254|ref|ZP_06174629.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835061|gb|EEZ89145.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 259

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 73/199 (36%), Gaps = 16/199 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  +     R+G +++K ++  I    I + + +  +  +D   L   
Sbjct: 46  ALATNKLQSSFGSFSASWYFVRNGIVSLKEMRLAILCTFIGSAIGAEAVQFIDAGVLTSL 105

Query: 130 FAIFCLLMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
             +  + + +  L          E K  +       G   GF  G  G G G    L  +
Sbjct: 106 IPVLLIAISLYFLLSSTNKTAEGEPKLSEAMFALCVGGGVGFYDGFFGPGTGSIFALCFV 165

Query: 187 FYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
             G  S+  ATA +  ++      ALL  I +G     LP W +G       L +     
Sbjct: 166 ALGHFSLVDATARTKILNFTSNIAALLFFILAG-----LPVWEIG-------LTMAVGGF 213

Query: 246 LITPLATKLSYMIGKKYLT 264
           +   L  K+    G+K++ 
Sbjct: 214 IGAQLGAKVVVTKGQKWIR 232


>gi|290962009|ref|YP_003493191.1| hypothetical protein SCAB_76861 [Streptomyces scabiei 87.22]
 gi|260651535|emb|CBG74658.1| putative transmembrane protein [Streptomyces scabiei 87.22]
          Length = 247

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 86/259 (33%), Gaps = 18/259 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L ++A  + G   G  G GG ++ VP L                 A   SL ++ 
Sbjct: 1   MTVLVLALIAGAVIGLALGALGGGGSVLAVPALIYLLGF-------TPAAATTASLIIVT 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  +   H R G +  K    +     +   +   +   + ++ L  AFA+   L  +
Sbjct: 54  ATSATALYAHARGGNVAWKTGALFAAAGIVPAFLAGAVAGRLPEAVLTAAFAVIAALAAL 113

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            ML+        +            +          GG +    L+   G ++ +A  TS
Sbjct: 114 RMLRPSASGPPDRIRPGRAAGAGAGLGAVTGFLGVGGGFLAVPALVGVLGLAMRRAVGTS 173

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             V  + +  AL  R  +G           G ++   +      +IL      +L+  I 
Sbjct: 174 LLVITVNSLAALAARTGTG-----------GGLHWEVIGPFTGAAILGAWDGKRLATKIS 222

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              L   F+ ++   +   
Sbjct: 223 GTTLQRVFAGVLLAVAAFM 241



 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 1/80 (1%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHR-RHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
            + M  A+GTSL VI   S+ +        G ++ +++  +     +       + + + 
Sbjct: 163 GLAMRRAVGTSLLVITVNSLAALAARTGTGGGLHWEVIGPFTGAAILGAWDGKRLATKIS 222

Query: 123 KSFLNKAFAIFCLLMGILML 142
            + L + FA   L +   ML
Sbjct: 223 GTTLQRVFAGVLLAVAAFML 242


>gi|86147369|ref|ZP_01065682.1| hypothetical protein MED222_00902 [Vibrio sp. MED222]
 gi|85834797|gb|EAQ52942.1| hypothetical protein MED222_00902 [Vibrio sp. MED222]
          Length = 259

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 84/210 (40%), Gaps = 16/210 (7%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  +     R+G +++K ++  IF   I + + + ++ H+D S L   
Sbjct: 46  ALATNKLQSSFGSFSASWYFVRNGIVSIKEMRLAIFCTFIGSAIGAELVQHIDASLLTSV 105

Query: 130 FAIFCLLMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             +  + + +  L   +      ++K  +       G   GF  G  G G G IFT   +
Sbjct: 106 IPLLLIAISLYFLLAPQTRASEGKQKISEAMFALCIGGGVGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                S+  ATA +  ++      AL+  I +G     LP W LG       L++     
Sbjct: 166 AIGHFSLVDATARTKILNFTSNIAALIFFILAG-----LPIWELG-------LVMAVGGF 213

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +   L  K+    G+K++     ++    +
Sbjct: 214 MGAQLGAKVVVTKGQKWIRPLVIVMSMLMA 243


>gi|225026146|ref|ZP_03715338.1| hypothetical protein EUBHAL_00387 [Eubacterium hallii DSM 3353]
 gi|224956526|gb|EEG37735.1| hypothetical protein EUBHAL_00387 [Eubacterium hallii DSM 3353]
          Length = 250

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 70/205 (34%), Gaps = 15/205 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    ++    FL+G +  + G GGGL+ +P    A         + +H A+ T+     
Sbjct: 3   IQTFLIVCPLVFLAGFVDAIAG-GGGLISLPAYMFA--------GVPVHNAIATNKLSSC 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +V+S     ++  ++   +   +      +V+ + +   +    L     +   ++  
Sbjct: 54  TGTVVSTWRLIKNKRVDWYFVPGTVVCALAGSVIGANLALIISDEILKTVLVVLLPIVAF 113

Query: 140 LMLKRDR-----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIY 193
            +L+             +     +     +  G   G  G G G F  L         + 
Sbjct: 114 CVLRDKNLEVIVPEGMTRRKQYIIAAACSLGIGIYDGFYGPGTGTFLLLAFTKLAKMDLE 173

Query: 194 KATATSAGVSALIAFPALLVRIYSG 218
           K+T     V+      AL+  I +G
Sbjct: 174 KSTGNVKAVNLASNISALITFILAG 198


>gi|87200262|ref|YP_497519.1| hypothetical protein Saro_2248 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135943|gb|ABD26685.1| protein of unknown function DUF81 [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 256

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 74/200 (37%), Gaps = 12/200 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +   + + + L+G +  + G GGGLVM+PVL            +  HV +GT+       
Sbjct: 11  FYPALTLVAVLTGFIDAVAG-GGGLVMMPVLL--------TTGLPPHVVLGTNKVQSMCG 61

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + M+   + R G  + +       V+ +  +  SL I  +    L     +  + + +  
Sbjct: 62  TAMATWRYHRAGLFSFRASAPTAAVVFLGAMAGSLAIQRLSADVLKLVVPVLLIAVALYT 121

Query: 142 LKRDRLYCERK--FPDNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATAT 198
           +    +    +            G   GF  G  G G G  F   L+   G  + +AT  
Sbjct: 122 VLSPNMSDHDRHGHLSERGYVPVGAGVGFYDGFFGPGAGQFFATTLVGLRGLGLTRATGL 181

Query: 199 SAGVSALIAFPALLVRIYSG 218
           +  ++      +++V    G
Sbjct: 182 TKYLNVTSNLASVIVFTIGG 201


>gi|328472014|gb|EGF42891.1| hypothetical protein VP10329_02635 [Vibrio parahaemolyticus 10329]
          Length = 259

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 76/199 (38%), Gaps = 16/199 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  +     R+G +++K ++  I    I   + +  +  +D S L   
Sbjct: 46  ALATNKLQSSFGSFSASWYFVRNGIVSLKEMRFAILCTFIGAAIGAEAVQFIDASVLTSL 105

Query: 130 FAIFCLLMGILMLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             I  + + +  L      ++  E K  +       G   GF  G  G G G IFT   +
Sbjct: 106 IPILLIAISLYFLLAPSTRKIDGEPKLAEAMFALCIGGGVGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                S+  ATA +  ++      ALL  + +G     LP W +G       L +     
Sbjct: 166 ALGHFSLVDATARTKILNFTSNIAALLFFVLAG-----LPVWEIG-------LTMAVGGF 213

Query: 246 LITPLATKLSYMIGKKYLT 264
           +   L  K+    G+K++ 
Sbjct: 214 IGAQLGAKVVVTKGQKWIR 232


>gi|296271320|ref|YP_003653952.1| hypothetical protein Tbis_3369 [Thermobispora bispora DSM 43833]
 gi|296094107|gb|ADG90059.1| protein of unknown function DUF81 [Thermobispora bispora DSM 43833]
          Length = 315

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 73/206 (35%), Gaps = 17/206 (8%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T++ S + H R G I+ K++        I     +  +S +         +I  L +G
Sbjct: 52  IGTTLASGISHWRFGNIDWKVVGRIAVPGAIGAFAGATFLSSLSTEVAAPIMSIILLTLG 111

Query: 139 ILMLKR------DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-AS 191
           + +L R       R    +     ++  + G+  GF+    G G G      +L  G  +
Sbjct: 112 VYILVRFTAYGLPRHNLGKPLRSRFLAPL-GLFAGFVDATGGGGWGPIGTPAILASGRLA 170

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
             K   +     +LIA  A    +  G G           ++   V ++L   ++  P+A
Sbjct: 171 PRKVIGSIDASESLIALAASAGFLV-GLGSEN--------IDFAWVGVLLLGGVIAAPIA 221

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
             L   I  + L      ++  T+  
Sbjct: 222 AWLVRHIPPRILGSAVGGLIILTNIR 247


>gi|288932562|ref|YP_003436622.1| hypothetical protein Ferp_2221 [Ferroglobus placidus DSM 10642]
 gi|288894810|gb|ADC66347.1| protein of unknown function DUF81 [Ferroglobus placidus DSM 10642]
          Length = 258

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 81/269 (30%), Gaps = 38/269 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             +  F+ G L GL G+GGG +M PVL            I +  A+GT L         S
Sbjct: 3   FALIGFVVGLLVGLTGIGGGALMTPVLLFL--------GIPIEKAIGTDLLYSFSVKSFS 54

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLM--ISHVDKSFLNKAFAIFCLLMGILMLK 143
              +++  +++  ++K       +      L+     VD+  L          + +LM+ 
Sbjct: 55  SALYKKGRSVDGTLIKLTSPSGILGVFFGYLLLKAGVVDRKVLTTILGATLFSVALLMIL 114

Query: 144 RDR---------------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLF 187
                                E       +  +   + G L     +G G      ++  
Sbjct: 115 SSARRRFKTECLICERYCERFEEGNGKKAIIAVIAFLVGILVELTSIGSGTLLTFAIISV 174

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                 K   +    S  +             G+       LG ++      ++P  IL 
Sbjct: 175 TNLKPNKIVGSDLITSLFLT------------GVASALHADLGNIDFVLASHLIPSGILG 222

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
             +  +LS     + L    S  +   + 
Sbjct: 223 AAIGYQLSKKCSPEMLKSAISACVAVAAL 251


>gi|254418929|ref|ZP_05032653.1| conserved domain protein, putative [Brevundimonas sp. BAL3]
 gi|196185106|gb|EDX80082.1| conserved domain protein, putative [Brevundimonas sp. BAL3]
          Length = 258

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 69/196 (35%), Gaps = 10/196 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             + ++  FL+ ++ G  G+  G++     S      G+  +     A  +       T+
Sbjct: 4   FLVFLLVGFLAQSVDGALGMAYGVIS----STVLLSFGVPPAT----ASASVHAAEVFTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN-KAFAIFCLLMGILM 141
             S   H  +  +N K+         +   + + +++ +D   +     A   ++ G+++
Sbjct: 56  AASAGSHTVNKNVNWKLFVPLAMGGVVGGCLGAFVLTSIDGDLVKPWITAYLAIMGGVII 115

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
            +  R    R FP  +   + G+V GF     G G G      ++  G     A  T+  
Sbjct: 116 WRATRQTRARIFPVRFAGPL-GVVGGFFDAIGGGGWGPTVTTTLVGSGGDPRAAIGTTNT 174

Query: 202 VSALIAFPALLVRIYS 217
               +        + +
Sbjct: 175 AEFFVTSAISATFLAA 190


>gi|70725040|ref|YP_251954.1| hypothetical protein SH0039 [Staphylococcus haemolyticus JCSC1435]
 gi|68445764|dbj|BAE03348.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 163

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 65/154 (42%), Gaps = 13/154 (8%)

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + I +++ +L+ +  +  F+N  + I  LL  ILM  +          +  +    G + 
Sbjct: 1   MVIGSILGALLATVFNSQFVNVIYIIIALLALILMFIKVTPSTSHIKFNRVLLITIGGII 60

Query: 167 GFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G +SG +G GG       L++ +   +      S  ++ + +  A ++++          
Sbjct: 61  GLVSGIVGAGGAFIIIPVLLVIFKLPMNMVVTNSIVIAFISSIGAFIIKLLQ-------- 112

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
               G++ I + + ++  SIL TPL  K+   I 
Sbjct: 113 ----GYIPINSAIPLILGSILFTPLGMKIGQKIP 142



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+I    + G +SG+ G GG  +++PVL   F+L        M++ +  S+ +   +S+
Sbjct: 51  VLLITIGGIIGLVSGIVGAGGAFIIIPVLLVIFKL-------PMNMVVTNSIVIAFISSI 103

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
            +F+     G I +      I    + T +   +   + 
Sbjct: 104 GAFIIKLLQGYIPINSAIPLILGSILFTPLGMKIGQKIP 142


>gi|319785685|ref|YP_004145160.1| hypothetical protein Psesu_0066 [Pseudoxanthomonas suwonensis 11-1]
 gi|317464197|gb|ADV25929.1| protein of unknown function DUF81 [Pseudoxanthomonas suwonensis
           11-1]
          Length = 261

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 82/239 (34%), Gaps = 24/239 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGG++ +P +     L GI         +GT+       +  +   + RHG ++++    
Sbjct: 28  GGGMITIPAML----LAGIPPLQV----LGTNKLQSLFGAGTASWTYARHGHVDLRAQLP 79

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC---ERKFPDNYVK 159
                    V  +L+ + V  S+L     +    + +    +  +     +R+  +    
Sbjct: 80  MALTAAAGAVAGALLATVVPGSWLRAVLPLLLFGIALYFWLKPDVGAVERQRRISEKAFA 139

Query: 160 YIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             +  V GF  G  G G G       +   G  I KATA +  ++      A +V + S 
Sbjct: 140 LTFVPVIGFYDGVFGPGTGSFLMLGFVGLAGYGILKATAHTKFLNFGSNLGAFVVFLVS- 198

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                      G V     L++    +L   L ++ +   G K +      +    +  
Sbjct: 199 -----------GAVLWKVGLVMGAGQVLGARLGSRFAMRQGAKVIKPLLVTVSVLLALR 246


>gi|257482681|ref|ZP_05636722.1| hypothetical protein PsyrptA_05425 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|330986643|gb|EGH84746.1| hypothetical protein PLA107_16582 [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 243

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 89/229 (38%), Gaps = 16/229 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++     I    I   +T
Sbjct: 24  AIPALGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALTLIVPSFIFAWLT 83

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSG 171
           SL+   VD   +   F  F +++ +  + +      +           ++ G+ +G   G
Sbjct: 84  SLLAVRVDPQSMRLGFVGFLVVLTVFNVAQMYWRGHQAGSGLRHEKWLWLLGVGSGMTGG 143

Query: 172 ALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
             GVGGG+    ++   +G +   A   +  ++A              + L+    WS+G
Sbjct: 144 LFGVGGGVVATPILTSVFGTTQVVAQGLALSLAAP-----STGITLVTYALHDHVNWSMG 198

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                  + +    +       KL++ + ++ L + F + +   + + A
Sbjct: 199 -------IPLAIGGLASISWGVKLAHSLPERTLRLMFCVFLVLCAVILA 240


>gi|302562796|ref|ZP_07315138.1| membrane protein [Streptomyces griseoflavus Tu4000]
 gi|302480414|gb|EFL43507.1| membrane protein [Streptomyces griseoflavus Tu4000]
          Length = 247

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 86/259 (33%), Gaps = 18/259 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L ++A  + G   G  G GG ++ VP L                 A   SL ++ 
Sbjct: 1   MTVLVLALIAGAVIGLALGALGGGGSVLAVPALIYLLGF-------TPAAATTASLIIVT 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  +   H R G +  K    +     +   +   +   + ++ L  AFA+   L  +
Sbjct: 54  VTSATALYAHTRDGNVAWKTGALFAAAGIVPAFLAGAVAGRLPEAVLTAAFAVVAALAAL 113

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            ML+        +            +          GG +    L+   G ++ +A  TS
Sbjct: 114 RMLRPSASEPPDRVRPGKAAGAGAALGAVTGFLGIGGGFLAVPALVSVLGLAMRRAVGTS 173

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             V  + +  AL  R  +G           G ++   +      +IL      +L+  I 
Sbjct: 174 LLVITVNSLAALTARTDTG-----------GGLHWEIIGPFTGAAILGAWDGKRLARRIT 222

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              L   F+ ++   +   
Sbjct: 223 GTALQKIFAGVLLAVAAFM 241



 Score = 43.1 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 8/95 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR-RHGTINMKILKDWIFVL 107
           VP L            + M  A+GTSL VI   S+ +        G ++ +I+  +    
Sbjct: 155 VPALVSVL-------GLAMRRAVGTSLLVITVNSLAALTARTDTGGGLHWEIIGPFTGAA 207

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +       +   +  + L K FA   L +   ML
Sbjct: 208 ILGAWDGKRLARRITGTALQKIFAGVLLAVAAFML 242


>gi|294341318|emb|CAZ89733.1| putative permease [Thiomonas sp. 3As]
          Length = 255

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 54/267 (20%), Positives = 97/267 (36%), Gaps = 38/267 (14%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +    +G L G  GVG G ++ P+L   F+L        + VA+GT L   A T +   +
Sbjct: 7   LFGLAAGALIGATGVGAGSLVTPLLLGVFRLD-------LPVAIGTDLWFAALTKLSGAV 59

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI------------FCL 135
            H RHG ++ +I    +    +   + +L+  H   +     F +               
Sbjct: 60  AHHRHGHVDRRIAGLMLAG-SLPAALATLVAMHASGAD-KAWFGVLSLALGAALLLTAAA 117

Query: 136 LMGILMLKRDRLYCERKFP---DNYVKYIWGMVTGFLSGALGVGGGIFTNL--LMLFYGA 190
           +M     +R  L  E + P      +    G V G L     VG G   +L  L+L+   
Sbjct: 118 VMSRGFWQRLALRLEARLPPSRKPGLTIALGAVLGVLVTLSSVGAGAIGSLCILLLYPRL 177

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           +  +   T    +  +   A +               +LG V+   VL +L  S+    L
Sbjct: 178 TARQLVGTDIAHAVPLTLVAGIGHA------------ALGHVDWPLVLALLVGSVPGIWL 225

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             +L+  + ++   +  S  +    F 
Sbjct: 226 GAQLTRFLPERMTRVLLSATLAFAGFK 252


>gi|152982072|ref|YP_001354141.1| hypothetical protein mma_2451 [Janthinobacterium sp. Marseille]
 gi|151282149|gb|ABR90559.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 257

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 91/248 (36%), Gaps = 36/248 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L+  F        +   VA+GT L   + T +     HR  G ++  I+K     
Sbjct: 26  LMTPLLTLLF-------GVSPTVAVGTDLAFASTTKIAGTFAHRYKGNVHWNIVKQLCIG 78

Query: 107 LPITTVVTSLMISHVD------KSFLNKAFAIFCLLMGILMLKRDRLY------CERKFP 154
                V+T+L++ ++          +  + A   +L  I ++ R RL         R+F 
Sbjct: 79  ALPAAVLTTLVLKYLGGLDKEIGQVIRYSIAGSVMLTVIALIFRTRLQNWMSAHPNRQFH 138

Query: 155 DNYV---KYIWGMVTGFLSGALGVGGGIFTNLLMLFY--GASIYKATATSAGVSALIAFP 209
              +     + G + G L     +G G     +++      +  +   T    +  +   
Sbjct: 139 GKKLVTATIVSGAILGTLVTISSIGAGAIGATILVLLYPRLTPAEIAGTDIAYAVPLTAI 198

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           A L              W LG ++   + ++L  S+    L +  S  I +K L +  + 
Sbjct: 199 AALG------------HWWLGSIHWELLAMLLLGSVPGITLGSLASRAIPEKVLRVLLAT 246

Query: 270 IMFTTSFV 277
            + T +F 
Sbjct: 247 TLTTVAFK 254



 Score = 39.7 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 45/122 (36%), Gaps = 6/122 (4%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +   IV+  + GTL  +  +G G +   +L   +  +   +        GT +    P 
Sbjct: 142 LVTATIVSGAILGTLVTISSIGAGAIGATILVLLYPRLTPAEIA------GTDIAYAVPL 195

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + ++ + H   G+I+ ++L   +        + SL    + +  L    A     +   +
Sbjct: 196 TAIAALGHWWLGSIHWELLAMLLLGSVPGITLGSLASRAIPEKVLRVLLATTLTTVAFKL 255

Query: 142 LK 143
           + 
Sbjct: 256 VY 257


>gi|257454073|ref|ZP_05619347.1| putative membrane protein [Enhydrobacter aerosaccus SK60]
 gi|257448551|gb|EEV23520.1| putative membrane protein [Enhydrobacter aerosaccus SK60]
          Length = 250

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 53/266 (19%), Positives = 102/266 (38%), Gaps = 25/266 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
               D + ++ + + ++G L  + G GGGL+ +P L  A        ++     +GT+  
Sbjct: 2   QLSFDMLVMLTLVAGIAGFLDAMAG-GGGLLTIPALLMA--------NVPTLYTLGTNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                S+ + +   R G I+ K +   I    +  V+ ++ +       L K       L
Sbjct: 53  QATAGSLSASITMIRKGKIHPKQIWRSIIACFVGAVLGAMAVQLSPPVLLAKGIPFLIAL 112

Query: 137 MGILMLKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           +GI  L    +   +  P    N  +Y    + GF  G LG G G+F  L  +   G  +
Sbjct: 113 IGIYYLFAPTIGEVKSAPRISKNKWQYGMSPLIGFYDGYLGPGTGMFFALGGITMRGLDM 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             ATA +  ++      +L+  +  G  L     WS+GF        ++    +   L  
Sbjct: 173 ITATANAKLLNFTSNAASLMFFVLGGKVL-----WSVGF-------AMMLGQFIGASLGA 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++    G K++     ++ F     +
Sbjct: 221 QMVVKGGTKFIRPVIVVMCFAMLIKY 246


>gi|257093263|ref|YP_003166904.1| hypothetical protein CAP2UW1_1665 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045787|gb|ACV34975.1| protein of unknown function DUF81 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 325

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 82/256 (32%), Gaps = 20/256 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
                     ++  + G  G+  G+      +     +G   +    +A G +      T
Sbjct: 81  MFWTAFAVGLIAQVVDGALGMAYGITS----TSFLLALGAPPA----MASGATHLAEVFT 132

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + +S + H R G +  K+    +    +  ++ + +++ +D + L    A++ L MGI +
Sbjct: 133 TGVSGVSHLRLGNVCRKLFLSLLIPGILGALIGTYVLTSIDGNALKPFIALYLLAMGIYV 192

Query: 142 LKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
             +  R +  +   D        +  GF+    G G G      ++  G        +  
Sbjct: 193 FSKAFRHHRNKSEIDTRKVAPLALFGGFMDTTGGGGWGPIVTTSLVSAGHDPRTTIGSVN 252

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                +     +           +   ++       V  +    +   P A  ++  +  
Sbjct: 253 LAEFFLTISTAIAFF-------AILDHTV----WLLVAGLAVGGLFAAPFAAFVTKQLKT 301

Query: 261 KYLTIGFSMIMFTTSF 276
           K L +    ++   S 
Sbjct: 302 KTLLMLVGGLISLISL 317


>gi|192290806|ref|YP_001991411.1| hypothetical protein Rpal_2422 [Rhodopseudomonas palustris TIE-1]
 gi|192284555|gb|ACF00936.1| protein of unknown function DUF81 [Rhodopseudomonas palustris
           TIE-1]
          Length = 262

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 83/247 (33%), Gaps = 35/247 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKIL-KDWIF 105
           +M P+L   F        I  HVA+ T L   A T ++    H R G I+  I+ + W  
Sbjct: 31  LMTPLLLLIF-------GIAPHVAIATDLWFAAITKLIGAAVHNRRGHIDWGIVTRLWAG 83

Query: 106 VLPITTVVTSLMISHVD---KSFLNKAFAIFCLLMGILMLKRDRL----------YCERK 152
            LP   +V +++          +L K   +  +L  + ++   RL            +  
Sbjct: 84  SLPAAGLVVAIVALSDPVGRTHWLTKTIGVVVILTALGIVFAPRLIAALNPATPDAEQPS 143

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNL--LMLFYGASIYKATATSAGVSALIAFPA 210
                +  + G V G L     +G G    +   +       ++  AT    +  +A  A
Sbjct: 144 RNRTSLTILAGAVLGALVALTSIGAGALGTVLLYLYPRRLLPHQLVATDLAHAIPLAMVA 203

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
               + +G             V+   +  +L  SI         +  +  + L I  + +
Sbjct: 204 GAGYLVAGM------------VDWHILASLLVGSIPAVIAGGLSAGKLSGRKLQIALAAV 251

Query: 271 MFTTSFV 277
           +F     
Sbjct: 252 LFAAGLK 258



 Score = 35.4 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 6/119 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I+A  + G L  L  +G G +          L      +  H  + T L    P +++
Sbjct: 149 LTILAGAVLGALVALTSIGAGAL------GTVLLYLYPRRLLPHQLVATDLAHAIPLAMV 202

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +   +   G ++  IL   +       +   L    +    L  A A      G+  L 
Sbjct: 203 AGAGYLVAGMVDWHILASLLVGSIPAVIAGGLSAGKLSGRKLQIALAAVLFAAGLKSLL 261


>gi|91793859|ref|YP_563510.1| hypothetical protein Sden_2507 [Shewanella denitrificans OS217]
 gi|91715861|gb|ABE55787.1| protein of unknown function DUF81 [Shewanella denitrificans OS217]
          Length = 253

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 76/206 (36%), Gaps = 13/206 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  V+   ++   + L+G +  + G GGGL+ +P L  A         +    A+GT+  
Sbjct: 3   ELTVEMAAVLFSVAILAGFIDSIAG-GGGLLTIPALLWA--------GLPPAAALGTNKL 53

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                S  +     R G ++++ +K  +    +   + ++ +  +D S L        L 
Sbjct: 54  QSCGGSFFASWYFIRKGMVDVRKIKLSLACAFVGASLGTIGVQMIDASVLETLLPFLILA 113

Query: 137 MGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
           +G   L   ++    +          +   +  GF  G  G G G       +   G  +
Sbjct: 114 IGGYFLFSKKISENDRHQVITPTVFAFTAALGIGFYDGFFGPGTGSFLALAFVSLAGFGL 173

Query: 193 YKATATSAGVSALIAFPALLVRIYSG 218
            KATA +  ++      +L+     G
Sbjct: 174 AKATAHAKLLNFATNVASLIFFAIGG 199


>gi|42522827|ref|NP_968207.1| putative permease [Bdellovibrio bacteriovorus HD100]
 gi|39574023|emb|CAE79200.1| putative permease [Bdellovibrio bacteriovorus HD100]
          Length = 259

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 8/126 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
               + +   G ++G  G GGG ++VP L +          + M VA+GTSLGVIA  S+
Sbjct: 141 AAFALKALGVGAVTGFVGAGGGFLIVPSLVRM-------SGLRMKVAVGTSLGVIAANSM 193

Query: 84  MSFMEH-RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + F         ++  +L     +      V S    H  ++ L  AF IF LL+G L++
Sbjct: 194 LGFFGDLWARTPMDFVLLLKVGALAVAGIFVGSYWSQHTSEARLKPAFGIFVLLLGGLII 253

Query: 143 KRDRLY 148
            +  L 
Sbjct: 254 VQQALN 259



 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 85/244 (34%), Gaps = 33/244 (13%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP+    F L          +A   SL V+  +S++ F  + R G +++K    +  
Sbjct: 25  ILAVPLFVYFFSL-------PPSLATTYSLFVVGVSSLIGFARNFRQGQVDVKAGVYFAV 77

Query: 106 VLPITTVVT-SLMISHVDKSFL------------NKAFAIFCLLMGILMLKRDRLYCERK 152
              +  ++    ++  +   ++              +FA+  ++  + ML       +  
Sbjct: 78  PSFVGVLLVRRWLLPAIPDQWVWGPVLFNKEVVILSSFAVVMVMAALAMLLPRASSAQGP 137

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPAL 211
                   +  +  G ++G +G GGG      ++   G  +  A  TS GV A  +    
Sbjct: 138 V-APAAFALKALGVGAVTGFVGAGGGFLIVPSLVRMSGLRMKVAVGTSLGVIAANSMLGF 196

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
              +++   ++        FV +  V  +    I    + +  S    +  L   F + +
Sbjct: 197 FGDLWARTPMD--------FVLLLKVGALAVAGIF---VGSYWSQHTSEARLKPAFGIFV 245

Query: 272 FTTS 275
               
Sbjct: 246 LLLG 249


>gi|218782556|ref|YP_002433874.1| hypothetical protein Dalk_4728 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763940|gb|ACL06406.1| Protein of unknown function DUF81 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 268

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 91/264 (34%), Gaps = 41/264 (15%)

Query: 26  IIVASFLSGTLS---GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +I+A FL   ++    + G GGG   V +L            + MH A  T   ++   S
Sbjct: 4   LIIAGFLIFLVAVTMTMVGKGGGNFYVVILGI--------TGVPMHEAAATGQFILFAAS 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + +  +++ +++  +      V   + +             L   FAI  L+ G++ML
Sbjct: 56  IAAMIIFQKNKSVSWLLAFWIGTVTAFSALGGGYFSHLFSAFSLKIVFAIMLLIAGVVML 115

Query: 143 KRDRLYCERKFPDN-----------------YVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
                                          ++     ++TGF SG +GV GG F   LM
Sbjct: 116 IPVSERHSAAGKKRLGVISIQSGMETYDVNLWIVLPVTILTGFGSGMVGVSGGSFLVPLM 175

Query: 186 LF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +   G  ++ A  T++ + A  AF         G                     +  I+
Sbjct: 176 VLVCGVPMHTAVGTASTLIAATAFMGFTGHAIQGDFNPS------------WAGPLAVIT 223

Query: 245 ILITPLATKLSYMIGKKYLTIGFS 268
           +    L  KL+     K+L   F+
Sbjct: 224 VAGGILGGKLALSSKPKHLKKIFA 247



 Score = 40.8 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 33/91 (36%)

Query: 54  KAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV 113
               LM +   + MH A+GT+  +IA T+ M F  H   G  N         +     ++
Sbjct: 170 FLVPLMVLVCGVPMHTAVGTASTLIAATAFMGFTGHAIQGDFNPSWAGPLAVITVAGGIL 229

Query: 114 TSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              +        L K FA    L  + M+  
Sbjct: 230 GGKLALSSKPKHLKKIFAYTNWLAALFMIVN 260



 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 44/123 (35%), Gaps = 15/123 (12%)

Query: 159 KYIWGMVTGFLSG---ALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
             I G +   ++     +G GGG F  +++   G  +++A AT   +    +  A+++  
Sbjct: 4   LIIAGFLIFLVAVTMTMVGKGGGNFYVVILGITGVPMHEAAATGQFILFAASIAAMIIFQ 63

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            +              V+      I  ++          S++     L I F++++    
Sbjct: 64  KNKS------------VSWLLAFWIGTVTAFSALGGGYFSHLFSAFSLKIVFAIMLLIAG 111

Query: 276 FVF 278
            V 
Sbjct: 112 VVM 114


>gi|327481369|gb|AEA84679.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 251

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 2/148 (1%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+G SLG +A ++++  +   R G +  + +                +   + +  L   
Sbjct: 44  AIGVSLGAVAMSALIGAIPRARLGQVAWRPVVLLALCGLPGNAAGQWLGQFIPERALIIG 103

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDN-YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F +  L     M +   L  +    D        G+  G LSG +GVGGG      +L++
Sbjct: 104 FCLLVLWSAWRMWRGASLPAKENAEDRYPALLGIGLGVGLLSGLMGVGGGFLIVPALLWF 163

Query: 189 -GASIYKATATSAGVSALIAFPALLVRI 215
              S+  A ATS  V A+++    L+ +
Sbjct: 164 TSLSLLSAMATSMAVIAVVSGGGFLLYL 191



 Score = 38.9 bits (90), Expect = 0.90,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 7/90 (7%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           VGGG ++VP L           S+ +  AM TS+ VIA  S   F+ +       + +L 
Sbjct: 150 VGGGFLIVPALLWF-------TSLSLLSAMATSMAVIAVVSGGGFLLYLTDAEPPLALLG 202

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
                     +  + +  +++ S L + FA
Sbjct: 203 GLALGGAFGVLSGNRLAQYLNSSLLQRLFA 232


>gi|301629829|ref|XP_002944036.1| PREDICTED: UPF0721 transmembrane protein ORF9-like [Xenopus
           (Silurana) tropicalis]
          Length = 252

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 89/253 (35%), Gaps = 25/253 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ +AS L+G +  + G GGGL+++P L   F       S      +GT+       + 
Sbjct: 4   ILVSLASLLAGFVDAIVG-GGGLILLPALFATF------ASAPPATLLGTNKSASVWGTA 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+  +  R   +  + +              + + +     FL K   +  + +    L 
Sbjct: 57  MATWQFSRRVRMPWRTMLPAAGAGFAGAFFGAWVATLASPEFLRKLLPLVMVAVLAYTLL 116

Query: 144 RDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATA 197
           +  L    +       +  V    G V GF  G  G G G F   + +   G     A+ 
Sbjct: 117 KKDLGLHHQPRWSGRAEALVACAVGAVIGFYDGFFGPGTGSFFVFVFVRLLGYDFLNASV 176

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           ++  ++      AL++                G V     L +   +++ + L T ++  
Sbjct: 177 SAKLLNLATNLAALVLFAAK------------GHVWWHFTLPLAAANVVGSMLGTYMALR 224

Query: 258 IGKKYLTIGFSMI 270
            G  ++   F ++
Sbjct: 225 HGTGFVRAIFILV 237


>gi|167567726|ref|ZP_02360642.1| hypothetical protein BoklE_34566 [Burkholderia oklahomensis EO147]
          Length = 268

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 101/275 (36%), Gaps = 40/275 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V   + G + GL G GGG++ VP L        +     M  A   +L  +A ++
Sbjct: 1   MLISLVLGGIVGAVLGLTGAGGGILAVPALV-------VGMGWPMQQATPVALVAVAGSA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +E  R G +  +            T +   +   + +  L   FA+  L++ + +L
Sbjct: 54  ALGALEGFRRGLVRYRAALLMAAAGVPLTTLGVRLAHVLPQRVLLALFALVMLIVAVRLL 113

Query: 143 KRDRLYCERKF---------------------PDNYVKYIWGMVTGFLSGALGVGGGIFT 181
           ++   +   +                      P        G +TG ++G LGVGGG   
Sbjct: 114 RQALAHAAGEPHRSPLCVGRIDPDTGRLVWSWPAGIALASTGALTGLMTGLLGVGGGFVI 173

Query: 182 NLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             ++  +   +++   ATS  V AL+    ++  + SG               +   L  
Sbjct: 174 VPMLRKFTNVTMHGIVATSLMVIALVGTGGVIATMISGTPAP-----------LDVTLWF 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
              + L       +S  +  +++  GF++ +   +
Sbjct: 223 TVTTALGMAAGRWVSRFLSARHVQTGFAVALVCVA 257



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G + G + G  G GGGI     L++  G  + +A          +A  A+    
Sbjct: 2   LISLVLGGIVGAVLGLTGAGGGILAVPALVVGMGWPMQQA--------TPVALVAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +  G V   A L++    + +T L  +L++++ ++ L   F+++M   +
Sbjct: 54  ALG----ALEGFRRGLVRYRAALLMAAAGVPLTTLGVRLAHVLPQRVLLALFALVMLIVA 109

Query: 276 FV 277
             
Sbjct: 110 VR 111


>gi|320450199|ref|YP_004202295.1| transport protein [Thermus scotoductus SA-01]
 gi|320150368|gb|ADW21746.1| transport protein [Thermus scotoductus SA-01]
          Length = 278

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 7/106 (6%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SGL G+G G V V  + +          +   V+  TS  +I  T+  S   + R G I+
Sbjct: 174 SGLLGIGSGAVKVLAMDRVM-------GLPYKVSTTTSNFMIGVTAAASAGIYLRQGYID 226

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++    +  + +   + + ++     S+L   FA+    +G+ M+
Sbjct: 227 PRVSFPVMLGVLLGAFLGARILPRSSTSWLRTLFALVIAALGLQMV 272



 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 81/240 (33%), Gaps = 40/240 (16%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +H A+G SL  +  TS  +   + R G  N+++         +  ++ + ++  + K  +
Sbjct: 44  LHHALGASLVSVIATSSGAAAAYVREGYTNLRLGMFLELATTLGALLGAGLLGVLPKRLV 103

Query: 127 NKAFAIFCLLMGILML----------------KRDRLYCERKFPDNYVKYIWGM------ 164
              F +  L    L                     RL  E   P    +  +G+      
Sbjct: 104 ALVFGLVLLHSAYLSYQGRLEDQPIDPKDSDPLAKRLRLEGGLPSPEGERAYGVRRLLAG 163

Query: 165 -----VTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
                + G LSG LG+G G    L M    G     +T TS  +  + A  +  + +  G
Sbjct: 164 LGLMGLAGVLSGLLGIGSGAVKVLAMDRVMGLPYKVSTTTSNFMIGVTAAASAGIYLRQG 223

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +            V+   +L +    +L   L  ++       +L   F++++       
Sbjct: 224 YIDPR--------VSFPVMLGV----LLGAFLGARILPRSSTSWLRTLFALVIAALGLQM 271


>gi|254495479|ref|ZP_05108403.1| protein of unknown function DUF81 [Polaribacter sp. MED152]
 gi|213690680|gb|EAQ40991.2| protein of unknown function DUF81 [Polaribacter sp. MED152]
          Length = 267

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 69/211 (32%), Gaps = 17/211 (8%)

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
            T+L       + + +   R+  +N K +   + +      +   +   + ++       
Sbjct: 62  ATALLCNIVVVLGNVIIFHRNKQLNYKKITPLVLLSIPFAYLGGYL--KISENLFFILLG 119

Query: 132 IFCLLMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
              +   + M    ++       +          G + GF+SG +G+GGGIF   ++   
Sbjct: 120 STLVFASVTMWLSKKIVSNSNANQENKLGQNGAIGSIIGFISGMVGIGGGIFLAPILHLT 179

Query: 189 GAS-IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                 K  AT++    + +    L         +  P + +   N G   I+L    + 
Sbjct: 180 NWDTPKKIAATASMFILVNSIAGFLG-------QSTNPDFQI---NWGLTSILLLTVFIG 229

Query: 248 TPLATKLSYM-IGKKYLTIGFSMIMFTTSFV 277
             +  ++S        L    ++++      
Sbjct: 230 GQIGNRISNNFFTPIQLKKATAILIAFVGIK 260


>gi|116252221|ref|YP_768059.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256869|emb|CAK07963.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 262

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 94/277 (33%), Gaps = 38/277 (13%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  L  ++    G L G+ GVGGG +M P+L   F        +    A+GT L   A
Sbjct: 1   MTFEPLYSLSGLCVGALVGITGVGGGSLMTPLLVLLF-------GVHPATAVGTDLLYAA 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIF 133
            T       H  HG +N KI+           ++   +++ VD       + +  A    
Sbjct: 54  ITKTAGTAVHGMHGRVNWKIVGSLAAGSLPAALLMLWLLAGVDRKSIGVTNTITTALGWL 113

Query: 134 CLLMGILMLKRDRL-----------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++  I+++ R  +              +      +  I G V G L     VG G    
Sbjct: 114 LVMTAIMLVFRGPILELARRAIGDRTPPKPTTILALTVILGFVLGVLVTLTSVGAGALGV 173

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
            ++L       + +   +    +  +                    W +G ++   +  +
Sbjct: 174 TILLVLYPRLDVREIVGSDIVHAVPLTLIGGTGY------------WLIGEIDWPMLFAL 221

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L  SI    + + L+  + ++ + I  +  +   +  
Sbjct: 222 LIGSIPGIIIGSLLAPKLHERTIRIVLAATLAVVALK 258


>gi|256832814|ref|YP_003161541.1| hypothetical protein Jden_1590 [Jonesia denitrificans DSM 20603]
 gi|256686345|gb|ACV09238.1| protein of unknown function DUF81 [Jonesia denitrificans DSM 20603]
          Length = 286

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 89/244 (36%), Gaps = 26/244 (10%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
            F +G +  + G GGGL+ +P L            I    A+ T+       + +S   +
Sbjct: 45  GFAAGWVDAVVG-GGGLIQLPALLLV-------PGISPVQALATNKVGSIMGTTVSATTY 96

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
            R    +M+          I  +  +     +    L     +  + + +  + R +L  
Sbjct: 97  YRAVHPDMRTALPMALTALIAAIGGARTAVLLPADALKPIVVVVLIGVAVYTMIRPQLGA 156

Query: 150 ERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVS 203
                           +WGMV GF  G LG G G F  + ++   G S   ATA +  V+
Sbjct: 157 YDNLRWSGHRHTVTAMLWGMVIGFYDGILGPGTGSFLVIALVAGLGYSFLPATAITKIVN 216

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
                 AL++ I       G   W+LG       L+I   +I    +  +++   G +++
Sbjct: 217 LATNAGALMLFI-----PTGAVVWTLG-------LVIGVTNICGAYVGARMAVARGSRFV 264

Query: 264 TIGF 267
            I F
Sbjct: 265 RIAF 268


>gi|254787437|ref|YP_003074866.1| hypothetical protein TERTU_3537 [Teredinibacter turnerae T7901]
 gi|237685094|gb|ACR12358.1| putative membrane protein [Teredinibacter turnerae T7901]
          Length = 256

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 92/252 (36%), Gaps = 25/252 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  +D + ++   + ++G +  L G GGGL+ +P L            +   +A+GT+  
Sbjct: 2   EISIDLLFILFAVAMVAGLIDTLAG-GGGLITIPALMVC--------GLPPVMALGTNKF 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                +  +     +   +  + ++  + +  +  V+ S  +  +++ +L          
Sbjct: 53  QACLGTGTATFLLLKRRRLRWRHIRQLLPMAFLGAVLGSTTVLFINQQYLTLIVPAVLSF 112

Query: 137 MGILMLK---RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL-MLFYGASI 192
           + +  L      R   + K P            GF  G  G G G F  L  ++F  A +
Sbjct: 113 ILVYFLLYRPGARWLPKIKMPARRYARWVVGGIGFYDGMFGPGTGSFFALAGVMFRKAQL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             ATAT+  ++      +L V   SG  L  +               ++   ++   + T
Sbjct: 173 VFATATAKPLNFATNIGSLAVFALSGSILVKVG------------AAMMCGQMIGAYMGT 220

Query: 253 KLSYMIGKKYLT 264
              Y I  KYL 
Sbjct: 221 HFLYRINPKYLR 232


>gi|328868613|gb|EGG16991.1| hypothetical protein DFA_07972 [Dictyostelium fasciculatum]
          Length = 521

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 8/127 (6%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
             +     I L+   S ++G L+ L G+GGG++  PVL      MG+   I       TS
Sbjct: 370 DINYSPQTIILLGFLSVIAGILASLLGIGGGMIKGPVLL----QMGLSPDITA----ATS 421

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
             +I  TS  S +++   G + +     + F   I   V +  + +  K    K++ IF 
Sbjct: 422 SFMILFTSASSAIQYVLLGKLRLDYGLVYYFTAFIACFVGTQSLLYAVKKSNRKSYFIFL 481

Query: 135 LLMGILM 141
           + + I++
Sbjct: 482 ICLVIVI 488



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 28/61 (45%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +     ++ G L+  LG+GGG+    ++L  G S     ATS+ +    +  + +  +  
Sbjct: 380 LLGFLSVIAGILASLLGIGGGMIKGPVLLQMGLSPDITAATSSFMILFTSASSAIQYVLL 439

Query: 218 G 218
           G
Sbjct: 440 G 440


>gi|150396951|ref|YP_001327418.1| hypothetical protein Smed_1748 [Sinorhizobium medicae WSM419]
 gi|150028466|gb|ABR60583.1| protein of unknown function DUF81 [Sinorhizobium medicae WSM419]
          Length = 261

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 93/265 (35%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  +  +  +  A+FL+G +  + G GGG++ +P +  A    GI         +GT+  
Sbjct: 3   DLALHILFFLFAAAFLAGFIDSIAG-GGGMITIPAMLIA----GIPPLET----LGTNKL 53

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                S  + + + RHG +N++       +     V+ +L+ + V    L        + 
Sbjct: 54  QSLFGSGSASIAYARHGHVNLREQLPMALMSAAGAVLGALLATVVPADILEAVLPFLLIG 113

Query: 137 MGILMLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
           + +    +     +   R+         +  + G   G  G G G F  L  +   G  I
Sbjct: 114 IALYFGFKPDVGDIDKHRRLSVFLFTITFVPLIGLYDGVFGPGTGSFFMLGFVSLAGYGI 173

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            KATA +  ++      A  V + SG             V     L +     L   + +
Sbjct: 174 LKATAHTKFLNFGSNIGAFFVFLLSGV------------VLWKVGLTMGVGQFLGAQVGS 221

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           + +   G K +     ++    +  
Sbjct: 222 RYAMAKGAKIIKPLLVIVSIALAIR 246


>gi|313679873|ref|YP_004057612.1| hypothetical protein Ocepr_0982 [Oceanithermus profundus DSM 14977]
 gi|313152588|gb|ADR36439.1| protein of unknown function DUF81 [Oceanithermus profundus DSM
           14977]
          Length = 245

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 7/122 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++ A  L+G LSGL G+GGG VMVP L                +A GT+L  +   S+
Sbjct: 131 VVLLGAGGLAGFLSGLLGIGGGTVMVPALVL-------GAGEPQQLAQGTALMAMILPSL 183

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +    H R G I+ KI    +  + +       +   + +  L   FA   L  G+  L+
Sbjct: 184 IGAYTHGRMGHIDRKIAPGLLLGIVVGAFSGGQVALGIPEGILRWIFAAVLLWTGLRYLR 243

Query: 144 RD 145
           R 
Sbjct: 244 RR 245



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 84/238 (35%), Gaps = 24/238 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++MVP+L    +L         H A GTSL  +A T+++  + +   G+++         
Sbjct: 23  VIMVPLLVSWARLD-------QHRAHGTSLMAVAGTALVGGVSYALGGSVDYVAAALLTV 75

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
              +T  + +     +D   L + F  F +L   L+  + +L          + ++  + 
Sbjct: 76  TAMMTARLGARYTQKLDARSLRRIFGSFLILTAFLLPFKKQLPHVAAGGAGALSWVVLLG 135

Query: 166 TGFLSGALGVGGG-----IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G L+G L    G     +    L+L  G     A  T+     L +             
Sbjct: 136 AGGLAGFLSGLLGIGGGTVMVPALVLGAGEPQQLAQGTALMAMILPSLIGAYT------- 188

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                   +G ++      +L   ++      +++  I +  L   F+ ++  T   +
Sbjct: 189 -----HGRMGHIDRKIAPGLLLGIVVGAFSGGQVALGIPEGILRWIFAAVLLWTGLRY 241



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 17/120 (14%)

Query: 162 WGMVTGFLS-----GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
            G + GFL+          GG I   LL+ +     ++A  TS    A  A    +    
Sbjct: 2   IGFLIGFLAGGFGALVGLGGGVIMVPLLVSWARLDQHRAHGTSLMAVAGTALVGGVSYAL 61

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            G             V+  A  ++   +++   L  + +  +  + L   F   +  T+F
Sbjct: 62  GGS------------VDYVAAALLTVTAMMTARLGARYTQKLDARSLRRIFGSFLILTAF 109


>gi|257454271|ref|ZP_05619538.1| hypothetical protein ENHAE0001_0839 [Enhydrobacter aerosaccus SK60]
 gi|257448346|gb|EEV23322.1| hypothetical protein ENHAE0001_0839 [Enhydrobacter aerosaccus SK60]
          Length = 255

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 80/208 (38%), Gaps = 13/208 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           + +   + ++   +F +G +    G GGGLV +P L  A     I         +GT+  
Sbjct: 2   EMIDTTMVVLGGFAFCAGLIDASVG-GGGLVQIPALLNALPHQSIATI------LGTNKL 54

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   +  +   +  +     ++L   +    +   + + +I  V ++ L     +  ++
Sbjct: 55  AVWAGTASAIGRYIPNIAFKWQLLLPTLLSAFVFAFLGACIIDQVPQTLLRYGVFVLLIV 114

Query: 137 MGILMLKRDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGA 190
           M I       L  E+           +  ++G + GF  G  G G G     + +  +G 
Sbjct: 115 MAIYTFMNKTLGAEQTKVSWGLKQIVLGILFGGLIGFYDGIFGAGSGSLLLFMFVKVFGF 174

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSG 218
           +  +A+A +  V+      ALL  I SG
Sbjct: 175 NFVQASAYTKVVNLATFTSALLFFIPSG 202


>gi|295681515|ref|YP_003610089.1| hypothetical protein BC1002_6747 [Burkholderia sp. CCGE1002]
 gi|295441410|gb|ADG20578.1| protein of unknown function DUF81 [Burkholderia sp. CCGE1002]
          Length = 267

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 8/122 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +     L+G ++G+ GVGGG ++VP++ K          + MH  + TSL VIA    
Sbjct: 149 AALAATGSLTGLMTGMLGVGGGFIIVPMMRKL-------TDVSMHGIVATSLMVIALVGS 201

Query: 84  MSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              +    HG  + +++   +        +   L   H+    +   FA   + + + +L
Sbjct: 202 GGVLATAAHGATLPLEVALWFTGATAAGMLSGRLASHHIAAHQVQLGFASILVCVALGLL 261

Query: 143 KR 144
            +
Sbjct: 262 VK 263



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 79/253 (31%), Gaps = 40/253 (15%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP L              +  A   +L  +A ++ +  +E  R   +  +       
Sbjct: 24  ILAVPALVFGMGW-------PLQQATPVALVAVAGSAAVGALEAFRKRLVRYRAALLMAA 76

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER-------------- 151
                T   + +   + +  L   FA   LL+   +L++                     
Sbjct: 77  AGMPATAAGARLAHALPQRVLLGLFAAVMLLVAFRLLRQTLARRASCHAQSSMCVAHVDP 136

Query: 152 -------KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVS 203
                   +P        G +TG ++G LGVGGG     +M      S++   ATS  V 
Sbjct: 137 ATGRFRWTWPTAAALAATGSLTGLMTGMLGVGGGFIIVPMMRKLTDVSMHGIVATSLMVI 196

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           AL+    +L     G  L                       +L   L    S+ I    +
Sbjct: 197 ALVGSGGVLATAAHGATLPLEVAL--------WFTGATAAGMLSGRL---ASHHIAAHQV 245

Query: 264 TIGFSMIMFTTSF 276
            +GF+ I+   + 
Sbjct: 246 QLGFASILVCVAL 258


>gi|260906650|ref|ZP_05914972.1| hypothetical protein BlinB_15077 [Brevibacterium linens BL2]
          Length = 302

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 90/261 (34%), Gaps = 23/261 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ +   L+  + G  G+  G+    +L  A        +      +GTSL       
Sbjct: 4   IIILGLVGLLAQLIDGSLGMAYGVTSTTLLLAAGVAPASASAAVHLSEIGTSLA------ 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H R G ++ K +        I     ++ ++ +         + F L++G+ ++
Sbjct: 58  --SGIAHHRFGNVDWKTVSILAVPGFIGAFGGAMFLAGLSGDAATPWVSAFLLVLGVYVI 115

Query: 143 -----KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKAT 196
                   R    R  P   +    G++ G L    G G G      +L  G     K  
Sbjct: 116 WRFLALGGRRPVFRGRPGVKLLVPVGLIGGALDSIGGGGWGPVGTTTLLSSGRLEPRKVI 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            +      ++A    L  +++          S G ++      +L   ++  PLA  L  
Sbjct: 176 GSIDTSEFVVAVGGSLGFLFA--------LGSSG-IDWSIAGALLVGGVIAAPLAAWLVK 226

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
           ++  + L I    I+  T+  
Sbjct: 227 ILPARVLAIAAGGIIILTNAR 247


>gi|70726212|ref|YP_253126.1| hypothetical protein SH1211 [Staphylococcus haemolyticus JCSC1435]
 gi|68446936|dbj|BAE04520.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 258

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 95/248 (38%), Gaps = 26/248 (10%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
              FL+  +  + G GGGL+  P L       G+  S    +A+GT+    +  S+ S +
Sbjct: 13  AFGFLAAFIDAVVG-GGGLISTPALLAI----GMPPS----LALGTNKLASSFGSLTSAI 63

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
           +  R G +++ I+      + I     + + + +    L     I   L+ I  + +   
Sbjct: 64  KFIRSGKVDLNIVLKLFPFVFIFAAGGASLATMLPAQILKPLIIIILSLVLIYTIMKKDW 123

Query: 148 YCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              R F         +     ++ GF  G LG G G F   ++L +G     A   +  +
Sbjct: 124 GNVRTFSKLTIGKAVIFVSLMLIIGFYDGFLGGGTGSFMLFVLLMFGFDFLSAAGNAKVL 183

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
           +      AL++ I             LG V+    LI+    I+ + +  + +   G  Y
Sbjct: 184 NFASNLGALVLFII------------LGQVDFVYGLIMAVSMIIGSYVGAQFAISKGVGY 231

Query: 263 LTIGFSMI 270
           + I F ++
Sbjct: 232 VKILFIIV 239


>gi|134299284|ref|YP_001112780.1| hypothetical protein Dred_1425 [Desulfotomaculum reducens MI-1]
 gi|134051984|gb|ABO49955.1| protein of unknown function DUF81 [Desulfotomaculum reducens MI-1]
          Length = 426

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 96/288 (33%), Gaps = 64/288 (22%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +     +G ++G  G GGG V+ P L            +   +A+GT    I   ++M  
Sbjct: 78  MAVGICAGLITGCIGAGGGFVITPALMSL--------GVKGILAVGTDQFHIFAKAIMGT 129

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISH-------VDKSFLNKAFAIFCLLMGI 139
           + H++ G +N+ +   ++    I       +          +    ++  + +    +G 
Sbjct: 130 VIHKKLGNVNVALAIAFLVGSGIGVTAGGTLNRALFNMNPVLSDFIISLVYVVMLGFLGF 189

Query: 140 LML-------------------------------------KRDRLYCERKFPDNYVKYIW 162
             +                                       + +    +    +     
Sbjct: 190 YSMYDFIKNKNTSGDAHGGPEGMTKLAQKLQGVNIAPMVKFDEDIVPGGRKISGWFVAFC 249

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           G V GF +  +GVGGG  T  + ++             GVS+       +++I    G +
Sbjct: 250 GAVVGFAAAIMGVGGGFLTFPMFVY-----------GLGVSSFTTVGTDILQIIFTAGYS 298

Query: 223 GLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            +  +++ G++     + +L  S+L   +    + ++   Y+   +++
Sbjct: 299 SIAQYAVYGYIFYTLAMGMLVGSLLGIQIGAATTKVVSGIYIRAFYAI 346



 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 38/113 (33%), Gaps = 8/113 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +     + G  + + GVGGG +  P+      +            +GT +  I  T+ 
Sbjct: 244 WFVAFCGAVVGFAAAIMGVGGGFLTFPMFVYGLGVSSFTT-------VGTDILQIIFTAG 296

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            S +     +G I   +    +    +   + +     V   ++   +AI  +
Sbjct: 297 YSSIAQYAVYGYIFYTLAMGMLVGSLLGIQIGAATTKVVSGIYIRAFYAIAIM 349


>gi|328952894|ref|YP_004370228.1| protein of unknown function DUF81 [Desulfobacca acetoxidans DSM
           11109]
 gi|328453218|gb|AEB09047.1| protein of unknown function DUF81 [Desulfobacca acetoxidans DSM
           11109]
          Length = 427

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 96/300 (32%), Gaps = 76/300 (25%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I     +G ++G  G GGG ++ P L        +   I   +A+GT L  I   ++M  
Sbjct: 80  IFIGLAAGLVTGCIGAGGGFIITPAL--------MSAGIKGILAVGTDLFHIFAKAIMGT 131

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-------DKSFLNKAFAIFCLLMGI 139
             HR+ G +++K+   ++F   +      ++   +          F++  +      +G 
Sbjct: 132 AVHRKMGNVSVKLAIAFLFGSLLGATGGGVLNRWIYETNPVLSDLFISLVYVFLLGFLGF 191

Query: 140 L-------------------------------------------------MLKRDRLYCE 150
                                                             +   + +   
Sbjct: 192 YAMTDFLKLRRAGSDTKIQDPHSHGEGKPAAPSGTTGLAQKLQAVHLPPMITFDEDIVPG 251

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPA 210
                     + G V G ++  +GVGGG     + ++             GVS+      
Sbjct: 252 GNHISGVFVALCGFVVGVVAAIMGVGGGFLAFPMFVYL-----------LGVSSFTTVGT 300

Query: 211 LLVRIYSGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            +++I    G   +  +++ GF+     + +L  S+    +    + ++   Y+   +++
Sbjct: 301 DILQIIFTAGYAAISQYAIYGFIFYTLAMGMLLGSLFGIQVGALTTKVVKGIYIRGFYAI 360



 Score = 42.4 bits (99), Expect = 0.074,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 8/113 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + +  F+ G ++ + GVGGG +  P+      +            +GT +  I  T+ 
Sbjct: 258 VFVALCGFVVGVVAAIMGVGGGFLAFPMFVYLLGVSSFTT-------VGTDILQIIFTAG 310

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            + +     +G I   +    +        V +L    V   ++   +AI  L
Sbjct: 311 YAAISQYAIYGFIFYTLAMGMLLGSLFGIQVGALTTKVVKGIYIRGFYAITIL 363


>gi|239908502|ref|YP_002955244.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
 gi|239798369|dbj|BAH77358.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
          Length = 384

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 8/118 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +   +   ++   GVGGG ++VP L+   QL        M++A GTS   +  + V S 
Sbjct: 263 FLGGIVISAVAAFLGVGGGFLLVPFLTSVTQL-------PMYLAAGTSALAVLVSMVTSI 315

Query: 87  MEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +     GT I    +   +  + + + V  +   +    +L + F +  L +GI  L 
Sbjct: 316 ITLLMKGTPIEWHFIGLEMLGIAVGSFVGPMTSKYFSDVWLKRLFIVLSLYVGIGYLL 373



 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 12/123 (9%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLV 213
           +  + ++ G+V   ++  LGVGGG      +       +Y A  TSA    +    +++ 
Sbjct: 258 NPLIPFLGGIVISAVAAFLGVGGGFLLVPFLTSVTQLPMYLAAGTSALAVLVSMVTSIIT 317

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            +  G  +       +G      +L I   S     +    S      +L   F ++   
Sbjct: 318 LLMKGTPIE---WHFIG----LEMLGIAVGSF----VGPMTSKYFSDVWLKRLFIVLSLY 366

Query: 274 TSF 276
              
Sbjct: 367 VGI 369


>gi|294651725|ref|ZP_06729026.1| integral membrane family protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|292822391|gb|EFF81293.1| integral membrane family protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 256

 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 92/256 (35%), Gaps = 25/256 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + I  +I  +F +GT+    G GGGL+ +P L      MG           GT+      
Sbjct: 4   ELILSLIFFAFCAGTIDAAVG-GGGLIQIPAL------MGALPQTAPATIFGTNKLASIC 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     R   +   +L        +++   +  +S +    L     I  +++ + 
Sbjct: 57  GTASAAFSFVRRVKLKWPLLLVIAIFAFVSSFAGAACVSMIPTHILRPFVLIMLIVIAVY 116

Query: 141 MLKRDRLYC----ERKFPDNYVKYIWGMV-TGFLSGALGVG-GGIFTNLLMLFYGASIYK 194
            L + +       +R  P   +    G +  GF  G  G G G  F    + F       
Sbjct: 117 TLMKKQFGQVHVDQRITPKLLMFAAIGSLAIGFYDGIFGPGTGSFFIFFFIRFLQVDFLH 176

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A S   + +    AL   +       G   ++LG       L++   +I  + L  +L
Sbjct: 177 ASALSKIGNFMTNLAALSFFV-----PTGHVLFTLG-------LMMAVANIAGSLLGVRL 224

Query: 255 SYMIGKKYLTIGFSMI 270
           +   G  ++ I F ++
Sbjct: 225 ALKYGSGFIRILFLIL 240


>gi|149181337|ref|ZP_01859834.1| hypothetical protein BSG1_06984 [Bacillus sp. SG-1]
 gi|148850900|gb|EDL65053.1| hypothetical protein BSG1_06984 [Bacillus sp. SG-1]
          Length = 243

 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 84/255 (32%), Gaps = 24/255 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              +++V  F +  +  + G G GL+ +PV+  A         + +H A+ TS      +
Sbjct: 1   MFFILLVTGFFTALIGTVAGSG-GLIGMPVMLLA--------GLPVHSAIATSKFSNTLS 51

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  SF        I  K     +       +   L    + +  +    A+F L+    +
Sbjct: 52  SFSSFAYLLNKKEIKWKEALSILPFAFGGGMAGGLTAGLLSQKVMEVI-AVFLLISAFSI 110

Query: 142 LKRDRLYCERKFPDNYVKYIWGMV--TGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
               +        D  +K I   +   GF  G  G G         L+ G S  K+ A +
Sbjct: 111 SFLKKPAAADNSNDAPLKGIGPFLTAIGFYDGMFGPGQATMLMHTFLYKGVSYLKSIAFT 170

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
              + +    A L  +++G  +              A L     SI+    A + +  + 
Sbjct: 171 RFQTFVSCSAAFLAYLFNGHFI------------WQAGLAFCLGSIIGAQTAVRFADKVP 218

Query: 260 KKYLTIGFSMIMFTT 274
            K   +  + +    
Sbjct: 219 LKTAKLFLNGMTLIL 233


>gi|295396370|ref|ZP_06806536.1| integral membrane protein [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970810|gb|EFG46719.1| integral membrane protein [Brevibacterium mcbrellneri ATCC 49030]
          Length = 276

 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 99/244 (40%), Gaps = 28/244 (11%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L+++AS L+G +  + G GGGL+ +P L            +    A+ T+     
Sbjct: 21  ITTILLLVLASALAGWIDAVVG-GGGLIQLPALLLV-------PGMTPIQAVATNKIGSI 72

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             + +S   +     ++  +         I  V+ +L+ S + +        +  + +G+
Sbjct: 73  CGTTVSATTYLAKVKVDKSVTVPGAIFALIGAVMGALVASQIPEKAFTPIILVVLIGVGV 132

Query: 140 LMLKRDRLYCERKFP-------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGAS 191
             L +  L  E +          + V ++ G++ G   GALG G G F  + ++   G S
Sbjct: 133 FTLAKPSLGTEARLRFSERPRMHHGVSWLIGLLVGMYDGALGPGTGSFLVIGLVAVVGFS 192

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
             +A+A++  ++    F +LL  + +            GFV   A L +   +++     
Sbjct: 193 FLQASASAKVMNWATNFGSLLFFVPA------------GFVVWKAGLAVAVGNVIGGFFG 240

Query: 252 TKLS 255
            KL+
Sbjct: 241 AKLA 244


>gi|213965052|ref|ZP_03393250.1| YtnM protein [Corynebacterium amycolatum SK46]
 gi|213952166|gb|EEB63550.1| YtnM protein [Corynebacterium amycolatum SK46]
          Length = 341

 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 88/267 (32%), Gaps = 29/267 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA-MGTSLGVI 78
           ++ + + ++    +  + G  G+  G+     L           S  +HVA +GT+L   
Sbjct: 1   MEKLIVFVLIGLGAQLVDGTLGMAFGVTAT-SLFIVAGSSAATASAVVHVAEVGTTLA-- 57

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                 S + H R G ++ + +        I   V +  ++++D        +   L +G
Sbjct: 58  ------SGISHWRFGNVDWRRVLSLGVPGAIGAFVGATFLANLDGDAATPVTSTILLFLG 111

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGAL--GVGGGIFTNLLMLFYGAS---IY 193
           + ++ R       K              G   G L    GGG          GA      
Sbjct: 112 LWVIIRFAFLSNAKRKKKAWGAKKLAPLGLFGGLLDSTGGGGWGPVTTSTLLGAEADQPR 171

Query: 194 KATATSAGVSALIAFPALLVR---IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           K   T +    L++  A+L     +   +  +  P           V+ +L   ++  PL
Sbjct: 172 KIIGTVSAAEFLVSLAAVLGFLPKLREEFTQHAAP-----------VIGLLCGGVIAAPL 220

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           A  L   I  + L I    ++   +  
Sbjct: 221 AAYLVGRINPRLLGIAIGGVLVGLNIR 247


>gi|169828832|ref|YP_001698990.1| hypothetical protein Bsph_3366 [Lysinibacillus sphaericus C3-41]
 gi|168993320|gb|ACA40860.1| Hypothetical 27.4 kDa protein [Lysinibacillus sphaericus C3-41]
          Length = 198

 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 17/201 (8%)

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S +   R G +++K +      +   +++ + ++  ++ S L     I    + I  
Sbjct: 3   SLTSTLTFYRSGKLDIKAVYKLFPFVFFGSMLGAWIVHLMNPSVLKPLMLIMLAAVAIYT 62

Query: 142 LKRDRLYC----ERKFPDNYVKYIWG-MVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           + +         ++  P  Y+ ++    V GF  G LG G G F     L  G    ++ 
Sbjct: 63  IFKKDWGSITTYKKLTPKRYLLFVVVITVIGFYDGFLGPGTGSFLLFAFLMVGFDFLQSA 122

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++      ALL+ IY            LG +N    L +    I    + +K + 
Sbjct: 123 GNAKFLNFGSNVAALLMFIY------------LGQINYAYGLPMGLAQIAGAIVGSKFAI 170

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G  Y+   F ++       
Sbjct: 171 KRGSGYVRKLFIVVTILLLLK 191


>gi|329754342|gb|AEC03569.1| magnetosome protein MamO [alpha proteobacterium UT-4]
          Length = 587

 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 71/222 (31%), Gaps = 48/222 (21%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                 + + + +   +    +K  I       VV   + + +  S +     +F L+M 
Sbjct: 374 VFVYGATALRNDKAQLVQWNKVKPLIPWGVAGVVVGYFIGNAIGDSVVGVLLGLFALIMA 433

Query: 139 -------------------------------ILMLKRDRLYCERK---FPDNYVK-YIWG 163
                                          ++ L       +      PD  V+  + G
Sbjct: 434 GKAVLEIIRPDAGEGDLAPVSPVSADEEMDELMALASGDAKAKSDGLDLPDGPVRNAVLG 493

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           +  G  SG LG+ GG+    L  + G  ++  A A S+ +    +   + V    G    
Sbjct: 494 LPMGLFSGILGISGGVVEVPLQRYVGRMTLQNAIANSSVLVFWASVAGVAVSFLHGT--- 550

Query: 223 GLPPWSLGFVNIGA----VLIILPISILITPLATKLSYMIGK 260
                S G ++  A     ++++P + +   +  +L  ++  
Sbjct: 551 -----STGLIHWEAPVTLAVVMIPGAYVGGIIGARLMRVLPV 587



 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 11/99 (11%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V     G  SG+ G+ GG+V VP+             + +  A+  S  ++   SV   
Sbjct: 490 AVLGLPMGLFSGILGISGGVVEVPLQRYV-------GRMTLQNAIANSSVLVFWASVAGV 542

Query: 87  MEHRRHGT----INMKILKDWIFVLPITTVVTSLMISHV 121
                HGT    I+ +       V+     V  ++ + +
Sbjct: 543 AVSFLHGTSTGLIHWEAPVTLAVVMIPGAYVGGIIGARL 581


>gi|330992347|ref|ZP_08316295.1| UPF0721 transmembrane protein yjnA [Gluconacetobacter sp. SXCC-1]
 gi|329760546|gb|EGG77042.1| UPF0721 transmembrane protein yjnA [Gluconacetobacter sp. SXCC-1]
          Length = 261

 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 95/270 (35%), Gaps = 35/270 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +++    G L G+ GVGGG +M P+L   F+       +    A+GT L   A T  
Sbjct: 9   LLYVLSGLGVGFLVGMTGVGGGSLMTPLLILLFR-------VHPQAAVGTDLLYAALTKT 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAIFCLLM 137
           +  + H R   ++ +++          TV+T  ++             ++ A  I  L+ 
Sbjct: 62  VGTLVHGRSQAVDWRVVGRLALGSIPATVLTIAVLHWAGSPSVRVTHVISVALGIALLIT 121

Query: 138 G--------ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY- 188
                    +  L   +           +  + G V G +     VG G      ++F  
Sbjct: 122 APSVLFRQRLQALSGRKADVLSPAMTGSLTTLLGGVLGVMVTLSSVGAGAIGMAALIFLY 181

Query: 189 -GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
            G  I +   +    +  +              + G+  W +G +++  ++ +L  SI  
Sbjct: 182 PGLEIRRLVGSDIAHAVPLT------------AIAGMGHWWIGDIDMHLLVSLLCGSIPG 229

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             L +    ++  +   +  + I+ T    
Sbjct: 230 IILGSLCVGIVPDRVQRVILAAILVTVGLK 259


>gi|226943937|ref|YP_002799010.1| hypothetical protein Avin_18220 [Azotobacter vinelandii DJ]
 gi|226718864|gb|ACO78035.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
          Length = 289

 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 98/261 (37%), Gaps = 25/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++   +F++G +  + G GGGL+ VP L  A         +  H+ +GT+       +
Sbjct: 42  LVVLACVAFVAGFIDAIAG-GGGLITVPALLTA--------GLPPHLVLGTNKLCSTFGA 92

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++ +   R G  + +     +    +  ++ + +  ++   +LN++  +     G+ +L
Sbjct: 93  AIASLTFIRRGLFHPRQWYGALAATALGALLGAAVAHYLPARWLNQSLPVIVFACGLYLL 152

Query: 143 KRDRLYCERKFPDNYV---KYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATAT 198
                   ++         ++  G+  G   G  G G G F T   +L Y   + +A+  
Sbjct: 153 FSRTPGGIQRPDARIAKLRQWPQGLALGAYDGVAGPGTGTFWTVSTLLLYPLDLVRASGV 212

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++ +    AL V I SG             V     L +    +    L  + +   
Sbjct: 213 ARSMNFVSNAVALSVFIGSGQ------------VAWLLGLSMGCALMTGAWLGARTAIGG 260

Query: 259 GKKYLTIGFSMIMFTTSFVFA 279
           G + +   F  ++   +   A
Sbjct: 261 GARLIRPLFIGVVLVLTVRLA 281


>gi|323491017|ref|ZP_08096209.1| hypothetical protein VIBR0546_20705 [Vibrio brasiliensis LMG 20546]
 gi|323314681|gb|EGA67753.1| hypothetical protein VIBR0546_20705 [Vibrio brasiliensis LMG 20546]
          Length = 259

 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 78/199 (39%), Gaps = 16/199 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  +     R+G +++K ++  I    I + V +  + ++D   L   
Sbjct: 46  ALATNKLQSSFGSFSASWYFVRNGIVSIKEMRLAIVCTFIGSAVGAEAVQYIDAGVLTSL 105

Query: 130 FAIFCLLMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             I  + + +  L   +      E K  +    +  G   GF  G  G G G IFT   +
Sbjct: 106 IPILLVAISLYFLLMPKTRQHSGEAKISEAMFAFSVGSGVGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                S+  ATA +  ++      ALL  I +G     LP W LG       L++     
Sbjct: 166 ALGHFSLVDATARTKVLNFTSNIAALLFFILAG-----LPVWELG-------LVMAIGGF 213

Query: 246 LITPLATKLSYMIGKKYLT 264
           +   L  K+    G+K++ 
Sbjct: 214 IGAQLGAKVVVTKGQKWIR 232


>gi|145514580|ref|XP_001443195.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124410573|emb|CAK75798.1| unnamed protein product [Paramecium tetraurelia]
          Length = 472

 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 11/133 (8%)

Query: 7   NFSLMVFLSKDCVVDYICLII---VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD 63
            F+ + FL K+     I          FL+G +SG  G+G G VMVP L           
Sbjct: 314 QFNQINFLPKERYFTPISKFFKIYAGGFLAGFVSGFLGMGAGFVMVPTLLF--------S 365

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            +    A  TS  +    S+ + +    +  ++ + +  +  +  I   + + +   +  
Sbjct: 366 GLIPRCASATSAFIYLMISLNNLITLLTNHYLDWQTILLFTGLAIIGGSIFAKIGYILLA 425

Query: 124 SFLNKAFAIFCLL 136
            +    F I  + 
Sbjct: 426 KYKIGYFVILIVF 438



 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 13/128 (10%)

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
                +  Y  G + GF+SG LG+G G      +LF G     A+ATSA +  +I+   L
Sbjct: 329 PISKFFKIYAGGFLAGFVSGFLGMGAGFVMVPTLLFSGLIPRCASATSAFIYLMISLNNL 388

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +  + +             +++   +L+   ++I+   +  K+ Y++  KY  IG+ +I+
Sbjct: 389 ITLLTNH------------YLDWQTILLFTGLAIIGGSIFAKIGYILLAKY-KIGYFVIL 435

Query: 272 FTTSFVFA 279
              S   A
Sbjct: 436 IVFSLDIA 443


>gi|262377370|ref|ZP_06070594.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
 gi|262307823|gb|EEY88962.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
          Length = 254

 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 98/266 (36%), Gaps = 25/266 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I  ++V +F +G +    G GGGL+ +P +      MG    +      GT+     
Sbjct: 3   IEIIISLVVFAFFAGAIDAAVG-GGGLIQIPAI------MGSLPHLQPATVFGTNKLASI 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  +   + R   +   +L        +++ + +  ++ +    L     +  +++ I
Sbjct: 56  CGTASAAFSYLRQVKLPWLLLGVIALCSFVSSFMGAASVTLIPVEILKPFVLVMLIVIAI 115

Query: 140 LMLKRD---RLYCERKFPDNYVKYIW--GMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             L +    +++ E+K     +       +  GF  G  G G G F     + Y      
Sbjct: 116 YTLMKKQFGQVHTEQKLNRKMLILAALGSLAIGFYDGIFGPGTGSFFIFFFIRYLSVDFL 175

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+A S   +      AL   I SG        + +G        ++   +I  + +  +
Sbjct: 176 HASALSKIANFTTNLAALSFFIPSG-----NVLFMVG-------AMMAVANICGSLVGVR 223

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVFA 279
           L++  G  ++ I F +++       A
Sbjct: 224 LAFKYGSGFIRILFLILVSLLICRMA 249


>gi|251770953|gb|EES51538.1| protein of unknown function [Leptospirillum ferrodiazotrophum]
          Length = 263

 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 51/246 (20%), Positives = 94/246 (38%), Gaps = 17/246 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           + ++   +SG LSGL G+GGG+V++         +     I   +A   S+  +A  S+ 
Sbjct: 9   IYLLLGGVSGFLSGLLGIGGGVVLL-PALLFLLPLVSHVRIAPFMATEISMIQVAFASLT 67

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + HR    + +  L  W         V +++   +    +   F    LL   L+L R
Sbjct: 68  GIIAHRPSAHVPLGRLLFWAGSALAGGAVGAVVSWRLSGRVILWIFLAETLLALTLLLFR 127

Query: 145 D---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSA 200
                     + P    +++     G  SG LGVGGG     ++   +G   + A  +S 
Sbjct: 128 PPERPPGEAHRPPLLSAEFLAIFSIGLSSGILGVGGGFLVYPVLTLLFGYPSFVAVGSSL 187

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            V   +A  A L +     G+                L I+  +++ + L  + +  +G 
Sbjct: 188 AVMFPMAATAALTKSLVSGGVP------------PHTLTIVVGALMGSFLGARFTRRLGG 235

Query: 261 KYLTIG 266
           K + I 
Sbjct: 236 KRIRIF 241


>gi|39935199|ref|NP_947475.1| hypothetical protein RPA2130 [Rhodopseudomonas palustris CGA009]
 gi|39649050|emb|CAE27571.1| DUF81 [Rhodopseudomonas palustris CGA009]
          Length = 268

 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 84/248 (33%), Gaps = 36/248 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKIL-KDWIF 105
           +M P+L   F       SI  HVA+ T L   A T ++    H R G I+  I+ + W  
Sbjct: 36  LMTPLLLLIF-------SIAPHVAIATDLWFAAITKLIGAAVHNRRGHIDWGIVTRLWAG 88

Query: 106 VLPITTVVTSLMISHVD---KSFLNKAFAIFCLLMGILMLKRDRL----------YCERK 152
            LP   +V +++          +L K   +  +L  + ++   RL            +  
Sbjct: 89  SLPAAGLVVAIVALSDPVGRTHWLTKTIGVVVILTALGIVFAPRLIAALNPATPDAEQPS 148

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNL---LMLFYGASIYKATATSAGVSALIAFP 209
                +  + G V G L     +G G    +    +       ++  AT    +  +A  
Sbjct: 149 RNRTSLTIMAGAVLGALVALTSIGAGALGTVLLLYLYPRRLLPHRLVATDLAHAIPLAMV 208

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           A    + +G             V+   +  +L  SI         +  +  + L I  + 
Sbjct: 209 AGAGYLVAGM------------VDWHILASLLVGSIPAVIAGGLSAGKLSGRKLQIALAA 256

Query: 270 IMFTTSFV 277
           ++F     
Sbjct: 257 VLFAAGLK 264



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 5/119 (4%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I+A  + G L  L  +G G      L     L      +  H  + T L    P +++
Sbjct: 154 LTIMAGAVLGALVALTSIGAG-----ALGTVLLLYLYPRRLLPHRLVATDLAHAIPLAMV 208

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +   +   G ++  IL   +       +   L    +    L  A A      G+  L 
Sbjct: 209 AGAGYLVAGMVDWHILASLLVGSIPAVIAGGLSAGKLSGRKLQIALAAVLFAAGLKSLL 267


>gi|307636918|gb|ADN79368.1| integral membrane protein [Helicobacter pylori 908]
 gi|317013669|gb|ADU81105.1| hypothetical protein HPGAM_01285 [Helicobacter pylori Gambia94/24]
 gi|325995508|gb|ADZ50913.1| Integral membrane protein [Helicobacter pylori 2018]
 gi|325997106|gb|ADZ49314.1| hypothetical protein hp2017_0232 [Helicobacter pylori 2017]
          Length = 277

 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 75/215 (34%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G +++K          +  V+ S ++  ++   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLKEGSFAALGGLMGAVLGSFILKIINDKILMAVFVVVVCYTFIKYAFS 119

Query: 145 DRLYCE-------------------RKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
           +    E                   R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 NNKKPEHFEEMHFDLHANNKTPEKKRAIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|300114703|ref|YP_003761278.1| hypothetical protein Nwat_2124 [Nitrosococcus watsonii C-113]
 gi|299540640|gb|ADJ28957.1| protein of unknown function DUF81 [Nitrosococcus watsonii C-113]
          Length = 266

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 99/279 (35%), Gaps = 45/279 (16%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  + G + GL GVGGG +M P+L   F   GI        A+GT L   A T +  
Sbjct: 5   YILAGLVVGFMVGLTGVGGGSLMTPLLIFGF---GIPPLA----AVGTDLLFAALTKMGG 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK------AFAIFCLLMGI 139
              H RH TI  +++         +T++   ++       L        A     +L  +
Sbjct: 58  IWAHWRHHTIQWRVVGLLALGSIPSTLIALQILKLFQARGLQLEGIINTALGTALVLTAV 117

Query: 140 LMLKRD---RLYCERKFP---------------DNYVKYIWGMVTGFLSGALGVGGGIFT 181
            +  +    R+   R  P                     + G V GFL     +G G   
Sbjct: 118 ALPMKSWLQRMAARRALPKIMQPAYSLRCNPRFTTVSTLVMGGVLGFLVTLSSIGAGALG 177

Query: 182 NLLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
            +++LF   G    +  AT    +  +   A +              W LG V++  +  
Sbjct: 178 AVVLLFLYPGLRTVQVVATDITHAVPLTAIAGIG------------HWYLGSVDMALLGN 225

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +L  S+    +A+ +   I ++ +    + ++      F
Sbjct: 226 LLLGSLPGIYVASHIGVNIPERTMQTVLATLLMLVGIKF 264


>gi|300022569|ref|YP_003755180.1| hypothetical protein Hden_1045 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299524390|gb|ADJ22859.1| protein of unknown function DUF81 [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 266

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 93/271 (34%), Gaps = 35/271 (12%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +II   F+ G L GL GVG G +M P        +GI  +    +A+GT L   + T   
Sbjct: 12  MIISGGFVVGFLVGLTGVGAGSLMTP---FLITKIGISPA----LAVGTDLLFASITKAS 64

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVV-----------TSLMISHVDKSFLNKAFAIF 133
           +   H   G +N +++          ++            T+ + + +  + +       
Sbjct: 65  AAWPHHNFGNVNWRLVAWLAAGSVPGSLAMLAILHVLDPDTARLAALIKHALIAALVISS 124

Query: 134 CLLMGILMLKRDRLY---CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-- 188
             ++   ++ R              +    + G+  G +     VG G    +++     
Sbjct: 125 LAIIFYPLITRRGAQVVEPTDVPVRHLSTLLLGLCLGSIVTLTSVGAGAIGVVILTLLYP 184

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
                +   T    +  +   + L  +            S+G  +   + ++L  SI   
Sbjct: 185 TLRTRRLIGTDIVHAVPLTLVSGLGHM------------SIGNTSFELLGLLLVGSIPGI 232

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            + ++L+  +    L +  + I+   ++  A
Sbjct: 233 AIGSRLTGRLPDWLLRLFLATILCFAAYQLA 263


>gi|307596181|ref|YP_003902498.1| hypothetical protein Vdis_2077 [Vulcanisaeta distributa DSM 14429]
 gi|307551382|gb|ADN51447.1| protein of unknown function DUF81 [Vulcanisaeta distributa DSM
           14429]
          Length = 473

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 80/248 (32%), Gaps = 45/248 (18%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           S+ +  A G++L     TS  S   + +    N +I    +       ++ SLM +++  
Sbjct: 45  SVPIIYATGSALISTISTSAGSASVYVKKRLANDRIGISLVTATTTGAIIGSLMANYIYA 104

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN--------------------------- 156
           + L     I   L+ +  +         + P                             
Sbjct: 105 NHLTWIIYIVFGLVLLASIVPTMQRSTCELPPPRNPDWTTRVFRLYGVCYDPALKIWYRY 164

Query: 157 -----YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPA 210
                ++ ++     GF+SG LG+G G    L M +     +  +T TS  +  + A  +
Sbjct: 165 WGVRWWLGWLIMFFAGFISGLLGIGSGALKVLAMDWGMNLPMKVSTTTSNFMIGVTAATS 224

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
             +             W  G+++           +L + + T++   +  + +   F  I
Sbjct: 225 GSLY------------WFFGYISPFIAACTAIGVLLGSRIGTRMLMYVTNRQVRWVFVAI 272

Query: 271 MFTTSFVF 278
           +    F  
Sbjct: 273 LAYLGFRM 280



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 7/136 (5%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G +SGL G+G G + V  +           ++ M V+  TS  +I  T+  S   + 
Sbjct: 177 FFAGFISGLLGIGSGALKVLAMDW-------GMNLPMKVSTTTSNFMIGVTAATSGSLYW 229

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
             G I+  I       + + + + + M+ +V    +   F      +G  M+ R      
Sbjct: 230 FFGYISPFIAACTAIGVLLGSRIGTRMLMYVTNRQVRWVFVAILAYLGFRMVLRGLGREG 289

Query: 151 RKFPDNYVKYIWGMVT 166
                +  + I   + 
Sbjct: 290 ILPITSLERTIIAAIF 305


>gi|220908236|ref|YP_002483547.1| hypothetical protein Cyan7425_2843 [Cyanothece sp. PCC 7425]
 gi|219864847|gb|ACL45186.1| protein of unknown function DUF81 [Cyanothece sp. PCC 7425]
          Length = 263

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 96/274 (35%), Gaps = 41/274 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++   SF  G L GL G+GG  ++ P+L   FQ       +   +A+ + +       V
Sbjct: 4   WMLSSLSFGIGILVGLTGIGGASLITPMLIVVFQ-------VPAAIAVSSDVVAATLMKV 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF----------LNKAFAIF 133
           +  ++H R  T++ +I++          +        +   +          L  +  + 
Sbjct: 57  VGGLKHWRQQTLDPQIVQWLALGSVPGALTGVGCFHWLQNIWSEDWNGLLLRLLGSLILV 116

Query: 134 CLLMGILMLKRDRLYCERKFP-----------DNYVKYIWGMVTGFLSGALGVGGGIFTN 182
             L+G+L L    L  + +FP              +    G + G L G   V  G    
Sbjct: 117 VTLVGMLRLVVSLLLPQVQFPLFPRLDLQTWQGRCLTIAIGAILGCLVGLTSVASGSMFA 176

Query: 183 L-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
           + LM F+     K   T    +A++     L  +            SLG V+ G V  I 
Sbjct: 177 MVLMAFFQLDARKLVGTDISQAAILLSFTSLGHL------------SLGTVDWGIVGAIW 224

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             S+    +  KL   I +K L      ++   S
Sbjct: 225 LGSVPGVLVGAKLCQSIPQKPLQAVVYSMLLLVS 258


>gi|53719193|ref|YP_108179.1| hypothetical protein BPSL1559 [Burkholderia pseudomallei K96243]
 gi|126451693|ref|YP_001066438.1| hypothetical protein BURPS1106A_2174 [Burkholderia pseudomallei
           1106a]
 gi|134277584|ref|ZP_01764299.1| putative membrane protein [Burkholderia pseudomallei 305]
 gi|167918720|ref|ZP_02505811.1| hypothetical protein BpseBC_09205 [Burkholderia pseudomallei
           BCC215]
 gi|217421329|ref|ZP_03452833.1| putative membrane protein [Burkholderia pseudomallei 576]
 gi|237812497|ref|YP_002896948.1| hypothetical protein GBP346_A2246 [Burkholderia pseudomallei
           MSHR346]
 gi|242315303|ref|ZP_04814319.1| putative membrane protein [Burkholderia pseudomallei 1106b]
 gi|254189009|ref|ZP_04895520.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254198367|ref|ZP_04904789.1| putative membrane protein [Burkholderia pseudomallei S13]
 gi|254258414|ref|ZP_04949468.1| putative membrane protein [Burkholderia pseudomallei 1710a]
 gi|52209607|emb|CAH35560.1| putative membrane protein [Burkholderia pseudomallei K96243]
 gi|126225335|gb|ABN88875.1| putative membrane protein [Burkholderia pseudomallei 1106a]
 gi|134251234|gb|EBA51313.1| putative membrane protein [Burkholderia pseudomallei 305]
 gi|157936688|gb|EDO92358.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237]
 gi|169655108|gb|EDS87801.1| putative membrane protein [Burkholderia pseudomallei S13]
 gi|217395071|gb|EEC35089.1| putative membrane protein [Burkholderia pseudomallei 576]
 gi|237505315|gb|ACQ97633.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
 gi|242138542|gb|EES24944.1| putative membrane protein [Burkholderia pseudomallei 1106b]
 gi|254217103|gb|EET06487.1| putative membrane protein [Burkholderia pseudomallei 1710a]
          Length = 268

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 99/274 (36%), Gaps = 40/274 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V   + G + GL G GGG++ VP L        +     M  A   +L  +A ++
Sbjct: 1   MLISLVLGSIVGAVLGLTGAGGGILAVPALV-------VGMGWPMQQATPVALVAVAGSA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +E  R G +  +            T +   +   + +  L   FA+  L++ + +L
Sbjct: 54  ALGALEGFRRGLVRYRAAFLMAAAGVPLTTLGVRVAHRLPQRVLLALFALVMLVVAVRLL 113

Query: 143 K---------------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
           +                      D       +P        G +TG ++G LGVGGG   
Sbjct: 114 RQALRHAAGEPACSPLCVGRVNPDTGRLVWSWPAGIALASTGALTGLMTGLLGVGGGFVI 173

Query: 182 NLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             ++  +   +++   ATS  V AL+    ++  I SG               +   L  
Sbjct: 174 VPMLRKFTNVTMHGIVATSLMVIALVGTGGVIATIASGTPAP-----------LDVTLWF 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
              + L       +S  +  +++ +GF+  +   
Sbjct: 223 TATTALGMAAGRWVSRYLSARHVQLGFAAALVCV 256



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 49/122 (40%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G + G + G  G GGGI     L++  G  + +A          +A  A+    
Sbjct: 2   LISLVLGSIVGAVLGLTGAGGGILAVPALVVGMGWPMQQA--------TPVALVAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +  G V   A  ++    + +T L  ++++ + ++ L   F+++M   +
Sbjct: 54  ALG----ALEGFRRGLVRYRAAFLMAAAGVPLTTLGVRVAHRLPQRVLLALFALVMLVVA 109

Query: 276 FV 277
             
Sbjct: 110 VR 111


>gi|187933776|ref|YP_001887651.1| transporter [Clostridium botulinum B str. Eklund 17B]
 gi|187721929|gb|ACD23150.1| transporter [Clostridium botulinum B str. Eklund 17B]
          Length = 249

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/240 (20%), Positives = 98/240 (40%), Gaps = 23/240 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + +I    FL+G +  + G GGG++ +P    A         I +H+A GT+     
Sbjct: 1   MEVLLIICPLVFLAGIIDAVAG-GGGIISLPAYIFA--------GIPIHIAYGTNKFASC 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             + +S ++  R G I +K          I +   + ++  +++ +LN    I   ++ +
Sbjct: 52  IGTSISSIKFFRSGNIKIKSALLSAAGALIGSWFGAQIVLLLNEKYLNYCLIIILPIVSL 111

Query: 140 LMLKRDRLYCERKFPDN-----YVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIY 193
            +L       + K   +      + +I G+  G   G  G G G F  +      G ++ 
Sbjct: 112 FLLFNRSFGVKNKKELSNKKLYILSFIIGLFLGAYDGFFGPGTGTFLVICFTGILGFNLI 171

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+  +  V+    F AL+  I  G  +     +S+G   + A +  +  + L   LA K
Sbjct: 172 TASGNAKIVNLASNFSALIAYILGGKVM-----FSIG---VPAAVCAIAGNYLGAHLAIK 223


>gi|33601301|ref|NP_888861.1| hypothetical protein BB2318 [Bordetella bronchiseptica RB50]
 gi|33575737|emb|CAE32814.1| probable membrane protein [Bordetella bronchiseptica RB50]
          Length = 265

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             +SG  +GL GVGGG ++VP L +            MH  + TSL VIA  S ++    
Sbjct: 153 GAISGLFTGLLGVGGGFIIVPALRQF-------SDAPMHAIVSTSLMVIALISAVTVGHA 205

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
              G         ++    +  V+   +   +  + L + FA+ C+++  ++L R     
Sbjct: 206 VADGLTLDAAAWTFVAAAVLGMVLGRALAPRLPTARLQQLFALVCVVVAGVLLWRTGWQA 265



 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 78/248 (31%), Gaps = 40/248 (16%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     +     +    +A+G +  V          E  R GT+  K       V  
Sbjct: 26  VPALVLGLGMDMPQAAPVALMAVGLAAAV-------GSAEGLRRGTVRYKAAALMSVVGG 78

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE------------------ 150
           +     + +       +L+  FA+  LL+   ML++                        
Sbjct: 79  LAAPWGAQLARLAPGPWLSGLFAMVMLLVAGRMLRQSLAAPAGAQTQAERPCHISPQTGK 138

Query: 151 --RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIA 207
                         G ++G  +G LGVGGG      +  +  A ++   +TS  V ALI+
Sbjct: 139 FVWTPRAAATLGGIGAISGLFTGLLGVGGGFIIVPALRQFSDAPMHAIVSTSLMVIALIS 198

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
              +   +  G  L+                  +  ++L   L   L+  +    L   F
Sbjct: 199 AVTVGHAVADGLTLDAA------------AWTFVAAAVLGMVLGRALAPRLPTARLQQLF 246

Query: 268 SMIMFTTS 275
           +++    +
Sbjct: 247 ALVCVVVA 254


>gi|332795761|ref|YP_004457261.1| hypothetical protein Ahos_0070 [Acidianus hospitalis W1]
 gi|332693496|gb|AEE92963.1| conserved hypothetical protein [Acidianus hospitalis W1]
          Length = 285

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 86/265 (32%), Gaps = 52/265 (19%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++VP+L+         D I +  A G SL     TS  +   + +   IN+KI       
Sbjct: 32  ILVPILTLY-------DGIPIEYATGASLISTIATSSGAASAYLKDKIINLKIGTSLQVA 84

Query: 107 LPITTVVTSLMISHVDKSFLN----KAFAIFCLLMGILMLKRDRLY-------------- 148
                +  SL  +++    L       F I  L      +KR +                
Sbjct: 85  TTSGAIAGSLTATYIYSHHLEPIIYVVFGIVLLGSVYPTIKRGKFEIPMNSDPDWSTKFF 144

Query: 149 ----------CERKFPDNYVKYIWG----MVTGFLSGALGVGGGIFTNLLMLF-YGASIY 193
                      ++K     V+++ G     V G++SG LG+G G    + M +     I 
Sbjct: 145 QMHGEYYDMALQKKVEYWGVRWVQGASVMFVAGYVSGLLGIGSGALKVIGMDWVMNLPIK 204

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
             T TS  +  + A  +  +             W  G++            ++   + TK
Sbjct: 205 VTTTTSNFMIGVTAATSSGIY------------WVFGYIQPLIAAATSIGVLIGAFIGTK 252

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVF 278
               +  K +   F++++       
Sbjct: 253 TLVKLKNKRIRTIFTILLAFLGIQM 277



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F++G +SGL G+G G + V  +           ++ + V   TS  +I  T+  S   + 
Sbjct: 174 FVAGYVSGLLGIGSGALKVIGMDWVM-------NLPIKVTTTTSNFMIGVTAATSSGIYW 226

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I   I       + I   + +  +  +    +   F I    +GI M+ R
Sbjct: 227 VFGYIQPLIAAATSIGVLIGAFIGTKTLVKLKNKRIRTIFTILLAFLGIQMILR 280


>gi|325108365|ref|YP_004269433.1| hypothetical protein Plabr_1801 [Planctomyces brasiliensis DSM
           5305]
 gi|324968633|gb|ADY59411.1| protein of unknown function DUF81 [Planctomyces brasiliensis DSM
           5305]
          Length = 281

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 109/287 (37%), Gaps = 54/287 (18%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +I+++  + G ++GLFGVGG  ++VP+L+ A        ++   + +G+    +   + 
Sbjct: 4   LIILISGTVVGLVAGLFGVGGSFLLVPLLTFA-------TNVPAEILIGSCACQVLGPAT 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTS---------------LMISHVDKSFLNK 128
            + + +R      ++I    +  +   T++ +                 +  +    L  
Sbjct: 57  AAILSYRIRLK-ELQIPFILLGGIVSGTLMGARGLQAVNDYGDAASVSSVVQMSYLLLIW 115

Query: 129 AFAIFCLL------------MGILMLKRDRLYCE------RKFPDNYVKYIWGMVTGFLS 170
           +  +F L             +G L +   +   E      R         ++G++ G LS
Sbjct: 116 SLGLFSLWEANRHRRMKPISIGWLTMPWIKPTLEVFGRQRRHKISIVALSLFGVIVGLLS 175

Query: 171 GALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G LG+ GG+     L   +G    ++   S  +  +IA  A+   I++G+          
Sbjct: 176 GFLGLSGGVILVPGLHYLFGIPTKRSARLSMILVGMIAVQAI--FIHAGYHR-------- 225

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
             +++  V ++L    +   +   LS       L   F+ ++  ++ 
Sbjct: 226 --IDLRIVGMLLVGGTVGAQVGVMLSDRTTGGTLRKQFAWLLLASAL 270



 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 7/117 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  + +   + G LSG  G+ GG+++VP L   F   GI       +    S+ ++   +
Sbjct: 161 IVALSLFGVIVGLLSGFLGLSGGVILVPGLHYLF---GIPTKRSARL----SMILVGMIA 213

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           V +   H  +  I+++I+   +    +   V  ++        L K FA   L   +
Sbjct: 214 VQAIFIHAGYHRIDLRIVGMLLVGGTVGAQVGVMLSDRTTGGTLRKQFAWLLLASAL 270


>gi|330721031|gb|EGG99185.1| hypothetical protein imdm_1409 [gamma proteobacterium IMCC2047]
          Length = 274

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 94/282 (33%), Gaps = 48/282 (17%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   L G + GL G GG +  VP+L            + ++ A+G  LG +A +++   
Sbjct: 3   LLIGILIGLVLGLTGAGGSVFAVPMLVLLL-------GLPVNEAIGVGLGAVAVSALYGT 55

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR-- 144
           +++ R+  +             +       + + + +  L   F++  +++ + M ++  
Sbjct: 56  LKNWRYKAVLWLPAAILTVTGVLLVSAGKALGNQLPEVLLVVGFSLLAIVIALRMWRQAI 115

Query: 145 -------------------DRLYCERKFPDNYVKYIWGMVTGFLS---------GALGVG 176
                               R  C       +   +  + +  +S              G
Sbjct: 116 RQPESSQVVRSGQIDPQLLTRPVCRVSPTGQFKWRLPCVGSLVISGLLVGLLTGLFGVGG 175

Query: 177 GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G +   L++     S+ +A  TS  +   ++    +    +   L+              
Sbjct: 176 GFLIVPLVLFLTQVSMQQAVGTSLFIITWVSGTGFINYALTSNELD-----------WSM 224

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           + +I    +    L + +++ I    L   F+M +   S + 
Sbjct: 225 LALISAGGVAGMFLGSGIAHKIAGPQLQRIFAMGLVVVSLLM 266



 Score = 43.1 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 8/101 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT-INMKILKDWI 104
            ++VP++            + M  A+GTSL +I   S   F+ +      ++  +L    
Sbjct: 177 FLIVPLVLFL-------TQVSMQQAVGTSLFIITWVSGTGFINYALTSNELDWSMLALIS 229

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
                   + S +   +    L + FA+  +++ +LML   
Sbjct: 230 AGGVAGMFLGSGIAHKIAGPQLQRIFAMGLVVVSLLMLINQ 270


>gi|188587474|ref|YP_001919019.1| permease, putative [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179352161|gb|ACB86431.1| permease, putative [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 120

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            LI V  F++G ++GL  +GGG V++P L    Q       I  HVA G +L    P S+
Sbjct: 6   ILIYVIGFITGIVTGL-ALGGGAVLIPFLVLLVQ-------IEQHVAQGVTLIAFLPMSI 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           ++ + H + G +N  ++        I  +  +++        L K +  F ++MG  
Sbjct: 58  IAIITHYKQGNVNKSLIIPLASGSIIGAIGGAILAMSFSPEVLTKIYGGFLIVMGCY 114


>gi|156973237|ref|YP_001444144.1| hypothetical protein VIBHAR_00918 [Vibrio harveyi ATCC BAA-1116]
 gi|156524831|gb|ABU69917.1| hypothetical protein VIBHAR_00918 [Vibrio harveyi ATCC BAA-1116]
          Length = 259

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 73/199 (36%), Gaps = 16/199 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  +     R+G +++K ++  I    I + + +  +  +D   L   
Sbjct: 46  ALATNKLQSSFGSFSASWYFVRNGIVSLKEMRLAILCTFIGSAIGAEAVQFIDAGVLTSL 105

Query: 130 FAIFCLLMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
             +  + + +  L          E K  +       G   GF  G  G G G    L  +
Sbjct: 106 IPVLLIAISLYFLLSSTSKAAEGEPKLSEAMFALCVGGGVGFYDGFFGPGTGSIFALCFV 165

Query: 187 FYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
             G  S+  ATA +  ++      ALL  I +G     LP W +G       L +     
Sbjct: 166 ALGHFSLVDATARTKILNFTSNIAALLFFILAG-----LPVWEIG-------LTMAVGGF 213

Query: 246 LITPLATKLSYMIGKKYLT 264
           +   L  K+    G+K++ 
Sbjct: 214 IGAQLGAKVVVTKGQKWIR 232


>gi|76811731|ref|YP_333701.1| hypothetical protein BURPS1710b_2305 [Burkholderia pseudomallei
           1710b]
 gi|254179602|ref|ZP_04886201.1| putative membrane protein [Burkholderia pseudomallei 1655]
 gi|76581184|gb|ABA50659.1| putative membrane protein [Burkholderia pseudomallei 1710b]
 gi|184210142|gb|EDU07185.1| putative membrane protein [Burkholderia pseudomallei 1655]
          Length = 267

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 97/270 (35%), Gaps = 40/270 (14%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +V   + G + GL G GGG++ VP L        +     M  A   +L  +A ++ +  
Sbjct: 4   LVLGSIVGAVLGLTGAGGGILAVPALV-------VGMGWPMQQATPVALVAVAGSAALGA 56

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK--- 143
           +E  R G +  +            T +   +   + +  L   FA+  L++ + +L+   
Sbjct: 57  LEGFRRGLVRYRAAFLMAAAGVPLTTLGVRVAHRLPQRVLLALFALVMLVVAVRLLRQAL 116

Query: 144 ------------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
                              D       +P        G +TG ++G LGVGGG     ++
Sbjct: 117 RHAAGEPACSPLCVGRVNPDTGRLVWSWPAGIALASTGALTGLMTGLLGVGGGFVIVPML 176

Query: 186 LFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
             +   +++   ATS  V AL+    ++  I SG               +   L     +
Sbjct: 177 RKFTNVTMHGIVATSLMVIALVGTGGVIATIASGTPAP-----------LDVTLWFTATT 225

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
            L       +S  +  +++ +GF+  +   
Sbjct: 226 ALGMAAGRWVSRYLSARHVQLGFAAALVCV 255



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 49/121 (40%), Gaps = 13/121 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           +  + G + G + G  G GGGI     L++  G  + +A          +A  A+     
Sbjct: 2   ISLVLGSIVGAVLGLTGAGGGILAVPALVVGMGWPMQQA--------TPVALVAVAGSAA 53

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            G     L  +  G V   A  ++    + +T L  ++++ + ++ L   F+++M   + 
Sbjct: 54  LG----ALEGFRRGLVRYRAAFLMAAAGVPLTTLGVRVAHRLPQRVLLALFALVMLVVAV 109

Query: 277 V 277
            
Sbjct: 110 R 110


>gi|254425412|ref|ZP_05039130.1| conserved domain protein, putative [Synechococcus sp. PCC 7335]
 gi|196192901|gb|EDX87865.1| conserved domain protein, putative [Synechococcus sp. PCC 7335]
          Length = 261

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 86/258 (33%), Gaps = 38/258 (14%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +  +     ++G +  + G GGGL+M+P L            + +  A+ T+       
Sbjct: 2   ILLAVFAIGLVAGFVDAIAG-GGGLIMLPGLLF--------TGLPVGSAIATNKLCGTFG 52

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+ S ++  +   I+    K     + I   + S  I  +  ++          ++ + +
Sbjct: 53  SLTSTLKFAQSQQIDWSACKLMALPIIIGAYLGSRSIGLLPSTWAEPIVVTLMAIITLFV 112

Query: 142 LKRDRL--------------------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
           + +                         +  F         G   GF  G  G G GIF 
Sbjct: 113 IFKPGFGIAKVEAASSASSELQRSSSVSKHAFGRTLAMIFAGGAIGFHDGFFGPGTGIFL 172

Query: 182 NL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
              L+        +AT T+  ++ L  F AL+    +G        +S G   +   L +
Sbjct: 173 VFSLLSLASIDFLRATGTTKLLNFLANFTALVTFATTGS-----IDYSKG---LSGALGV 224

Query: 241 LPISILITPLATKLSYMI 258
           +  S L    AT+    +
Sbjct: 225 ILGSFLGATFATRKGAQL 242


>gi|325831002|ref|ZP_08164326.1| putative membrane protein [Eggerthella sp. HGA1]
 gi|325486923|gb|EGC89369.1| putative membrane protein [Eggerthella sp. HGA1]
          Length = 307

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 7/111 (6%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT 94
             SG  GVGGG +MVP++            I M  A GTSL  +   ++   +E    G 
Sbjct: 199 VASGYVGVGGGFIMVPLMLSLI-------GIEMRQASGTSLIAVMILAIPGVVEQALLGN 251

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           IN               V+ + ++  V +  L   F  F ++  ++++  +
Sbjct: 252 INYAAGIAIAVGSIPGAVIGARLVRVVPELALRFVFGFFLIVAAVILVLNE 302



 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 13/111 (11%)

Query: 168 FLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
             SG +GVGGG     LML   G  + +A+ TS     ++A P ++ +            
Sbjct: 199 VASGYVGVGGGFIMVPLMLSLIGIEMRQASGTSLIAVMILAIPGVVEQAL---------- 248

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             LG +N  A + I   SI    +  +L  ++ +  L   F   +   + +
Sbjct: 249 --LGNINYAAGIAIAVGSIPGAVIGARLVRVVPELALRFVFGFFLIVAAVI 297



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 7/99 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            VMVP+   AF +  +       V+  TSL  I PTS+     H RH T  + +      
Sbjct: 30  TVMVPIFRLAFGMSPV-------VSTATSLFAIIPTSISGAASHIRHKTCIVSLGVAAGL 82

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              +T+ +   +        +  A A+      + ML +
Sbjct: 83  GGALTSPLGVWLAQISPAWMIMVAAALIIGWSAVKMLGK 121


>gi|313903426|ref|ZP_07836817.1| protein of unknown function DUF81 [Thermaerobacter subterraneus DSM
           13965]
 gi|313466247|gb|EFR61770.1| protein of unknown function DUF81 [Thermaerobacter subterraneus DSM
           13965]
          Length = 296

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 90/265 (33%), Gaps = 25/265 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +    +   ++  + G  G+  G V    L   + L     S  +H+A         
Sbjct: 1   MQRLLAFALVGLIAQLVDGALGMAYG-VTSSSLLLLYGLAPAAASASVHLAE-------T 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+ +S + H R G  +   ++  +    +   + +++++ +    +    A F L++G+
Sbjct: 53  ITTAVSGLAHWRMGNWHRPTVRGLVLPGAVGAFLGAVLLASLPAERVRPVVAGFLLVLGV 112

Query: 140 LMLKRDRLYCERKFPDNYVKYI-----WGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIY 193
            +L R  L    +        +      G V G L    G G G      ++  G    +
Sbjct: 113 YILVRFTLAAMPRHRRPPRLRLRYVMPLGFVAGLLDATGGGGWGPIATPALMVRGDLPPH 172

Query: 194 KATATSAGVSALIAFPALLVRIYS-GWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           +   + +     +A  A L    + GW            V    V  ++    +  PLA 
Sbjct: 173 QVVGSVSIAEFAVAVSATLGFALTLGWEG----------VAWLQVAALVAGGAVAAPLAA 222

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
            ++  +  + L +     +   +  
Sbjct: 223 WMARRLPAQVLGVMVGTAVLLVNLR 247


>gi|317489056|ref|ZP_07947581.1| hypothetical protein HMPREF1023_01280 [Eggerthella sp. 1_3_56FAA]
 gi|316911788|gb|EFV33372.1| hypothetical protein HMPREF1023_01280 [Eggerthella sp. 1_3_56FAA]
          Length = 307

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 7/111 (6%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT 94
             SG  GVGGG +MVP++            I M  A GTSL  +   ++   +E    G 
Sbjct: 199 VASGYVGVGGGFIMVPLMLSLI-------GIEMRQASGTSLIAVMILAIPGVVEQALLGN 251

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           IN               V+ + ++  V +  L   F  F ++  ++++  +
Sbjct: 252 INYAAGIAIAVGSIPGAVIGARLVRVVPELALRFVFGFFLIVAAVILVLNE 302



 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 13/111 (11%)

Query: 168 FLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
             SG +GVGGG     LML   G  + +A+ TS     ++A P ++ +            
Sbjct: 199 VASGYVGVGGGFIMVPLMLSLIGIEMRQASGTSLIAVMILAIPGVVEQAL---------- 248

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             LG +N  A + I   SI    +  +L  ++ +  L   F   +   + +
Sbjct: 249 --LGNINYAAGIAIAVGSIPGAVIGARLVRVVPELALRFVFGFFLIVAAVI 297



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 7/99 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            VMVP+   AF +  +       V+  TSL  I PTS+     H RH T  + +      
Sbjct: 30  TVMVPIFRLAFGMSPV-------VSTATSLFAIIPTSISGAASHIRHKTCIVSLGVAAGL 82

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              +T+ +   +        +  A A+      + ML +
Sbjct: 83  GGALTSPLGVWLAQISPAWMIMVAAALIIGWSAVKMLGK 121


>gi|269139770|ref|YP_003296471.1| hypothetical protein ETAE_2425 [Edwardsiella tarda EIB202]
 gi|267985431|gb|ACY85260.1| hypothetical protein ETAE_2425 [Edwardsiella tarda EIB202]
 gi|304559636|gb|ADM42300.1| Putative membrane protein YfcA [Edwardsiella tarda FL6-60]
          Length = 266

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 90/238 (37%), Gaps = 25/238 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + ++   +  +G +  + G GGGL+ VP L       G+  +     A+ T+      
Sbjct: 9   ELLGVLFCVALFAGFIDAIAG-GGGLLTVPALLAV----GLPPAQ----ALATNKLQSVG 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S  S +   R   +N+   K  I +  +     +L++  +    L +      + +G+ 
Sbjct: 60  GSFSSSLYFIRRRVVNLAEQKWVILLTFLAAAAGALLVQRLQAEILRQLLPFLVIGVGLY 119

Query: 141 MLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            L    L      R+        + G   GF  G  G G G F  L  ++  G S+ +AT
Sbjct: 120 FLLTPSLGATEGARRVGMPLFAVLGGASVGFYDGFFGPGAGSFYALGYVMLLGLSLPQAT 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A +  ++      +LL+ I  G        WS+G       L +L    +   +  ++
Sbjct: 180 AHAKVLNFTSNAASLLLFIIGG-----NVVWSVG-------LCMLVGQAIGARVGARM 225


>gi|257792771|ref|YP_003183377.1| hypothetical protein Elen_3045 [Eggerthella lenta DSM 2243]
 gi|257476668|gb|ACV56988.1| protein of unknown function DUF81 [Eggerthella lenta DSM 2243]
          Length = 302

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 7/111 (6%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT 94
             SG  GVGGG +MVP++            I M  A GTSL  +   ++   +E    G 
Sbjct: 194 VASGYVGVGGGFIMVPLMLSLI-------GIEMRQASGTSLIAVMILAIPGVVEQALLGN 246

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           IN               V+ + ++  V +  L   F  F ++  ++++  +
Sbjct: 247 INYAAGIAIAVGSIPGAVIGARLVRVVPELALRFVFGFFLIVAAVILVLNE 297



 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 13/111 (11%)

Query: 168 FLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
             SG +GVGGG     LML   G  + +A+ TS     ++A P ++ +            
Sbjct: 194 VASGYVGVGGGFIMVPLMLSLIGIEMRQASGTSLIAVMILAIPGVVEQAL---------- 243

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             LG +N  A + I   SI    +  +L  ++ +  L   F   +   + +
Sbjct: 244 --LGNINYAAGIAIAVGSIPGAVIGARLVRVVPELALRFVFGFFLIVAAVI 292



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 7/99 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            VMVP+   AF +  +       V+  TSL  I PTS+     H RH T  + +      
Sbjct: 25  TVMVPIFRLAFGMSPV-------VSTATSLFAIIPTSISGAASHIRHKTCIVSLGVAAGL 77

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              +T+ +   +        +  A A+      + ML +
Sbjct: 78  GGALTSPLGVWLAQISPAWMIMVAAALIIGWSAVKMLGK 116


>gi|220925134|ref|YP_002500436.1| hypothetical protein Mnod_5288 [Methylobacterium nodulans ORS 2060]
 gi|219949741|gb|ACL60133.1| protein of unknown function DUF81 [Methylobacterium nodulans ORS
           2060]
          Length = 307

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 89/281 (31%), Gaps = 56/281 (19%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT 94
            +SG+FG+GGG +M PVL       GI  +    +A+ T    I  +S  S +   R   
Sbjct: 26  FISGVFGIGGGFLMTPVLIVL----GIPPA----IAVATQTAPIVASSTTSVLAALRRRG 77

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFCLLMGILML------- 142
           +++++    +    + T +     + + ++      +  A+     ++G LML       
Sbjct: 78  VDLRLGLVLVGGGLLGTALGVWFFAAMRRAGQLDLVITLAYVTLFSVVGGLMLLESLRDL 137

Query: 143 ------------------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG 178
                                    R R    R +          +  GF    LG+GGG
Sbjct: 138 WARRGGRPAALRLGREHPAYMAWPLRMRFPRSRLYASVLPILGLALFVGFAGAVLGIGGG 197

Query: 179 IFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
                 +L+           TS           L++                  V+I   
Sbjct: 198 FILVPALLYLLRVPTGVVVGTSQFQILWTGLVGLILHAVQNQA-----------VDIVLA 246

Query: 238 LIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +I++  S+       +L   +      +  ++++      F
Sbjct: 247 VILIAGSVFGAQFGARLGRNLRADTFRLLLAVLVLAVDLRF 287



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +   +  I+  +   G    + G+GGG ++VP L    +       +   V +GTS   I
Sbjct: 171 LYASVLPILGLALFVGFAGAVLGIGGGFILVPALLYLLR-------VPTGVVVGTSQFQI 223

Query: 79  APTSVMSFMEHR-RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
             T ++  + H  ++  +++ +    I          + +  ++         A+  L +
Sbjct: 224 LWTGLVGLILHAVQNQAVDIVLAVILIAGSVFGAQFGARLGRNLRADTFRLLLAVLVLAV 283

Query: 138 GILMLKRDRLYCERKF 153
            +  +    L     F
Sbjct: 284 DLRFVLELALRPAEPF 299


>gi|114328287|ref|YP_745444.1| hypothetical protein GbCGDNIH1_1623 [Granulibacter bethesdensis
           CGDNIH1]
 gi|114316461|gb|ABI62521.1| hypothetical membrane spanning protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 253

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 90/255 (35%), Gaps = 26/255 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +  A+F +G +  + G GGGL+ VP L     L G+          GT+        +
Sbjct: 9   VFLFAAAFCAGVVDTVAG-GGGLICVPAL----GLTGMGTVAV----FGTNKLQSVLGQL 59

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + ++ RR G ++   L+  +    +  +  ++++  V + FL +      L + +  + 
Sbjct: 60  SATLKFRRQGGMDFSPLRRGLLCTVVGALAGAMLLQIVSEVFLKRLVPWMLLGVFLYYVL 119

Query: 144 RDRLY----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATAT 198
                      R  P        G+V GF +G  G G G    + +   Y   I  AT  
Sbjct: 120 SSDRKDVAGEARLPPHPCKLQPLGVVIGFYNGFFGPGTGSIWTVALSRTYQLRINAATMY 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++      AL + I S              V+    LI+   S L   +   +    
Sbjct: 180 ANPLNMAGNIAALSILISSS------------AVDYRRALIMGAGSFLGAQIGGSVVIHK 227

Query: 259 GKKYLTIGFSMIMFT 273
             + L   F  +M  
Sbjct: 228 SARLLRTVFMTLMLV 242


>gi|207092367|ref|ZP_03240154.1| hypothetical protein HpylHP_05331 [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 277

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 75/215 (34%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK- 143
             + + + G ++++      F   +  ++ S ++  +D   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLREGSFAAFGGLMGAILGSFILKIIDDKILMAVFVVVVCYTFIKYAFS 119

Query: 144 ------------------RDRLYCERKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
                                   +R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 SNKKPKHFEEMHFDLHANNKTPEKKRPIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|167581754|ref|ZP_02374628.1| hypothetical protein BthaT_26664 [Burkholderia thailandensis TXDOH]
          Length = 268

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 102/276 (36%), Gaps = 40/276 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V   + G + GL G GGG++ VP L        +     +  A   +L  +A ++
Sbjct: 1   MLISLVLGSIVGAVLGLTGAGGGILAVPALV-------VGMGWPIQQATPVALVAVAGSA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +E  R G +  +            T +   +   + +  L   FA+  +++ + +L
Sbjct: 54  ALGALEGFRRGLVRYRAALLMAAAGVPLTTLGVRLAHVLPQRVLLALFALVMMIVAVRLL 113

Query: 143 KRDRLYCERKF---------------------PDNYVKYIWGMVTGFLSGALGVGGGIFT 181
           ++   +  R+                      P        G +TG ++G LGVGGG   
Sbjct: 114 RQALRHAAREPARSPLCVGRIDPDTGRLVWSWPAGIALASTGALTGLMTGLLGVGGGFVI 173

Query: 182 NLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             ++  +   +++   ATS  V AL+    ++  I SG               +   L  
Sbjct: 174 VPMLRKFTNVTMHGIVATSLMVIALVGTGGVIATIVSGTSAP-----------LDVTLWF 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              + L       +S  +  +++ +GF+  +   + 
Sbjct: 223 TVTTALGMAAGRWVSRYLSARHVQLGFAAALVCVAA 258



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G + G + G  G GGGI     L++  G  I +A          +A  A+    
Sbjct: 2   LISLVLGSIVGAVLGLTGAGGGILAVPALVVGMGWPIQQA--------TPVALVAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +  G V   A L++    + +T L  +L++++ ++ L   F+++M   +
Sbjct: 54  ALG----ALEGFRRGLVRYRAALLMAAAGVPLTTLGVRLAHVLPQRVLLALFALVMMIVA 109

Query: 276 FV 277
             
Sbjct: 110 VR 111


>gi|308182400|ref|YP_003926527.1| hypothetical protein HPPC_01140 [Helicobacter pylori PeCan4]
 gi|308064585|gb|ADO06477.1| hypothetical protein HPPC_01140 [Helicobacter pylori PeCan4]
          Length = 277

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 76/215 (35%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G ++++      F   +  ++ S ++  ++   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLREGSFAAFGGLMGAILGSFILKIINDKILMGVFVVVVCYTFIKYAFS 119

Query: 145 DRLYCE-------------------RKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
           +    E                   R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 NNKKPEHFEEMHFDLHANNKTPEKKRAIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|121536019|ref|ZP_01667809.1| conserved hypothetical protein [Thermosinus carboxydivorans Nor1]
 gi|121305409|gb|EAX46361.1| conserved hypothetical protein [Thermosinus carboxydivorans Nor1]
          Length = 118

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 7/118 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I   F+ G  SGL GVGGG+ +VP++   F       +I  H A GTSL V+ PT+++S
Sbjct: 7   LIGTGFIVGIFSGLLGVGGGVFLVPIMVSCF-------AIAQHTAHGTSLAVVIPTAIVS 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + +  HG  ++ +  + I    I   + + ++  +  + L + F I  + +G+ M+ 
Sbjct: 60  AIIYGFHGNADLGVSLNLIVGSVIGASIGARIMKKIPAAQLKRLFGILLVFVGLRMVF 117



 Score = 43.5 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 13/127 (10%)

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPAL 211
             +N      G + G  SG LGVGGG+F   +M+     + + A  TS  V    A  + 
Sbjct: 1   MTENVKLIGTGFIVGIFSGLLGVGGGVFLVPIMVSCFAIAQHTAHGTSLAVVIPTAIVSA 60

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           ++  + G    G+             L ++  S++   +  ++   I    L   F +++
Sbjct: 61  IIYGFHGNADLGVS------------LNLIVGSVIGASIGARIMKKIPAAQLKRLFGILL 108

Query: 272 FTTSFVF 278
                  
Sbjct: 109 VFVGLRM 115


>gi|332701882|ref|ZP_08421970.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332552031|gb|EGJ49075.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 342

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 56/135 (41%), Gaps = 13/135 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++  F  GT+ G FG+GG  ++ P L+             M  A+GT +  IA  S++S
Sbjct: 20  LVLIGFSVGTIGGFFGMGGAWMVTPGLNIL--------GFPMAFAIGTDMAHIAGKSMIS 71

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-----DKSFLNKAFAIFCLLMGIL 140
            M H + G ++ K+    +    +   + + +I H+       S +   +  F  L+  +
Sbjct: 72  TMRHSKFGNVDYKLGVVMLAGTMVGIEIGAQLIMHLERLGVVGSVVRWVYVGFLALIAAM 131

Query: 141 MLKRDRLYCERKFPD 155
           +        + K   
Sbjct: 132 VFYDYYKAVQNKNKG 146



 Score = 38.9 bits (90), Expect = 0.85,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 7/96 (7%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L               H+A+GT L  +  + +     +   G I +  +   +    I
Sbjct: 209 PALVYLI-------GTPTHIAVGTDLFEVMISGLYGAFTYAIKGRIELVAVFVMLTGAAI 261

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              + ++   +     +  AF I  L   I ++ + 
Sbjct: 262 GAQIGTVATKYAKGYGIRIAFGIAVLCCMISIILKQ 297


>gi|317177491|dbj|BAJ55280.1| hypothetical protein HPF16_0683 [Helicobacter pylori F16]
          Length = 220

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 58/154 (37%), Gaps = 6/154 (3%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           ++G S+  +A +S +  + + +  +++  +         I    +  ++  V    L   
Sbjct: 8   SIGISILQMALSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFILKIVSSKILMVI 67

Query: 130 FAIFCLLMGILMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
           FA+  +   I  + + +        +R        ++ G +TGF +  LG+GGG+    L
Sbjct: 68  FALLVVYSMIQFVLKPKKKDFIADTKRYHLQGLKLFLIGTLTGFFAITLGIGGGMLMVPL 127

Query: 185 MLFY-GASIYKATATSAGVSALIAFPALLVRIYS 217
           M ++ G    K  A         +       IY 
Sbjct: 128 MHYFLGYDSKKCVALGLFFILFSSISGAFSLIYH 161


>gi|257451719|ref|ZP_05617018.1| transporter [Fusobacterium sp. 3_1_5R]
 gi|257467020|ref|ZP_05631331.1| transporter [Fusobacterium gonidiaformans ATCC 25563]
          Length = 265

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 99/269 (36%), Gaps = 27/269 (10%)

Query: 8   FSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
            S M+    D   +   ++    FL+  +  + G GGG++ +P     F  +G+      
Sbjct: 1   MSSMLHWVGDMSPEAFFILSALCFLAAFIDSIAG-GGGMISLPA----FMAVGLPP---- 51

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           H+A+GT+    A  ++ S +   R   I + ++  +  +     +        +   +  
Sbjct: 52  HIALGTNKISAAIGTLASSLNFLRSNKIILPLVTRFAPLALFGAIFGVKTALLIPPKYFQ 111

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTN 182
                  + + I  L    L  E  +            I+ ++ GF  G LG G G F  
Sbjct: 112 PISFFLLICVFIYTLINKNLGEEYDYQGINSVNIKWGCIFSLLIGFYDGFLGPGTGSFLI 171

Query: 183 LLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
            +++  +      ATAT+  ++      +  +             +  G +N+   LI+ 
Sbjct: 172 FMLIKIFHLDFAHATATTKFINLASNIISAALY------------FHAGKLNLPLGLIMA 219

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMI 270
            I I+     + L+   G K++   F ++
Sbjct: 220 VIMIIGAFAGSSLAIYKGSKFIKPVFLVV 248



 Score = 35.4 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I    + S L G   G  G G G  ++ +L K F L           A  T+  +   ++
Sbjct: 145 IKWGCIFSLLIGFYDGFLGPGTGSFLIFMLIKIFHLD-------FAHATATTKFINLASN 197

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++S   +   G +N+ +      ++ I     S +  +    F+   F +  + +   M
Sbjct: 198 IISAALYFHAGKLNLPLGLIMAVIMIIGAFAGSSLAIYKGSKFIKPVFLVVTITLIGKM 256


>gi|226953790|ref|ZP_03824254.1| transmembrane protein [Acinetobacter sp. ATCC 27244]
 gi|226835461|gb|EEH67844.1| transmembrane protein [Acinetobacter sp. ATCC 27244]
          Length = 256

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 92/256 (35%), Gaps = 25/256 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + I  ++  +F +GT+    G GGGL+ +P L      MG           GT+      
Sbjct: 4   ELILSLVFFAFCAGTIDAAVG-GGGLIQIPAL------MGALPQTAPATIFGTNKLASIC 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     R   +   +L        +++   +  +S +    L     I  +++ + 
Sbjct: 57  GTASAAFSFVRRVKLKWPLLLVIAIFAFVSSFAGAACVSMIPTHILRPFVLIMLIVIAVY 116

Query: 141 MLKRDRLYC----ERKFPDNYVKYIWGMV-TGFLSGALGVG-GGIFTNLLMLFYGASIYK 194
            L + +       +R  P   +    G +  GF  G  G G G  F    + F       
Sbjct: 117 TLMKKQFGQVHVDQRITPKLLMFAAIGSLAIGFYDGIFGPGTGSFFIFFFIRFLQVDFLH 176

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A S   + +    AL   +       G   ++LG       L++   +I  + L  +L
Sbjct: 177 ASALSKIGNFMTNLAALSFFV-----PTGHVLFTLG-------LMMAVANIAGSLLGVRL 224

Query: 255 SYMIGKKYLTIGFSMI 270
           +   G  ++ I F ++
Sbjct: 225 ALKYGSGFIRILFLIL 240


>gi|254475805|ref|ZP_05089191.1| conserved domain protein, putative [Ruegeria sp. R11]
 gi|214030048|gb|EEB70883.1| conserved domain protein, putative [Ruegeria sp. R11]
          Length = 252

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 78/200 (39%), Gaps = 13/200 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D + L++ A F +G +  + G GGGL+ VPVL  A              A+ T+      
Sbjct: 7   DILLLLMAAGFAAGFIDAVAG-GGGLITVPVLLLA--------GANPITALATNKIQGLF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  + + + R G +N++       +  I +V  +L++S +   ++     +  + + + 
Sbjct: 58  GAATAALSYARGGHVNLREQAGSALIAGIASVAGALLVSVLPTDWIRLILPVLLIGIAVF 117

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVT---GFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
              +  L    +            +    G   G LG G G F  L  +   G  I +AT
Sbjct: 118 FATKKGLDDSDRARRVSPFVFAATIVPLCGAYDGLLGPGAGSFYMLGFVSLAGYGILRAT 177

Query: 197 ATSAGVSALIAFPALLVRIY 216
           A +  ++      ALL   +
Sbjct: 178 AHTKLLNFASNAGALLAFAF 197


>gi|90423425|ref|YP_531795.1| hypothetical protein RPC_1919 [Rhodopseudomonas palustris BisB18]
 gi|90105439|gb|ABD87476.1| protein of unknown function DUF81 [Rhodopseudomonas palustris
           BisB18]
          Length = 262

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 17/214 (7%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           HVA+GT    ++  +  + + H     +  +    +  V  +  ++ S +   +D   L 
Sbjct: 44  HVALGTGALAVSVNAYANLIGHALRKHVVWRCAMVFALVGTVGALIGSSLGKIIDGQLLL 103

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVK----YIWGMVTGFLSGALGVGGGIFTNL 183
             F I   ++  LML+  R+      P +        I  + TG  SG  G+GGG     
Sbjct: 104 FLFGIVMAIIAGLMLRPRRITAADAPPIDLKLCVKAGIAALATGAASGLFGIGGGFLIVP 163

Query: 184 LMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL-GFVNIGAVLIIL 241
            ++   G +   A  TS            L    +G     L  W + G    G ++  L
Sbjct: 164 ALILSTGMTTLNAVGTSLLAVGTFGLATALNYSLTG-----LIDWRIAGEFLAGGLVGGL 218

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             ++L   L  +      K  L+  F++++FT +
Sbjct: 219 AGTLLAARLGAR------KNTLSRIFAVVVFTVA 246


>gi|317012070|gb|ADU82678.1| hypothetical protein HPLT_01180 [Helicobacter pylori Lithuania75]
          Length = 277

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 74/215 (34%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSQ------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK- 143
             + + + G +++K          +  ++ S ++  +D   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLKEGSFAALGGLMGAILGSFILKIIDDKILMAVFVVVVCYTFIKYAFS 119

Query: 144 ------------------RDRLYCERKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
                                   +R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 SNKKPKHFEEMHFDLHANNKTPEKKRAIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|298290659|ref|YP_003692598.1| hypothetical protein Snov_0646 [Starkeya novella DSM 506]
 gi|296927170|gb|ADH87979.1| protein of unknown function DUF81 [Starkeya novella DSM 506]
          Length = 308

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 78/231 (33%), Gaps = 45/231 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++      G +SG+FGVGGG +M P+L       G+  +    VA+ +    +A +S
Sbjct: 14  IFTLLALGIAVGFISGMFGVGGGFLMTPLLIFL----GVPPA----VAVASVSTHMAASS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL------------MISHVDKSFLNKAF 130
               + + R G +++ +    +      T+   L            ++  +    L    
Sbjct: 66  FSGTLTYLRRGLVDVHLGLVLLAGGLTGTLGGVLTFMVLRRYGQLDLVIAITYIALLGTI 125

Query: 131 AIFCLLMGILMLKRD------------------------RLYCERKFPDNYVKYIWGMVT 166
               ++  +  L R+                        R      +         G   
Sbjct: 126 GTLMVVESLRALLREWRGEKASVARPGAHPLFLRLPFKMRFRQSHIYVSAIPVVAIGFSI 185

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIY 216
           GFL   +G+GGG      +++        + AT+  ++ +    A+++   
Sbjct: 186 GFLGALMGIGGGFILVPALIYLLRVPTLTSVATALMLTLVTMAAAIVMHAV 236



 Score = 45.4 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 28/63 (44%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           +     G+  GF+SG  GVGGG     L++F G     A A+ +   A  +F   L  + 
Sbjct: 15  FTLLALGIAVGFISGMFGVGGGFLMTPLLIFLGVPPAVAVASVSTHMAASSFSGTLTYLR 74

Query: 217 SGW 219
            G 
Sbjct: 75  RGL 77



 Score = 42.0 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 44/127 (34%), Gaps = 8/127 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++   F  G L  L G+GGG ++VP L    +       +    ++ T+L +   T   +
Sbjct: 178 VVAIGFSIGFLGALMGIGGGFILVPALIYLLR-------VPTLTSVATALMLTLVTMAAA 230

Query: 86  FMEHR-RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            + H   + T++  +    +    I     S     +    L     +  L +GI +   
Sbjct: 231 IVMHAVLNQTVDAVLGLVLMVGGTIGAQFGSRAGQSMKAENLRLLLGLLVLAVGIRVAVD 290

Query: 145 DRLYCER 151
                  
Sbjct: 291 QTTKPAD 297


>gi|77166444|ref|YP_344969.1| hypothetical protein Noc_2997 [Nitrosococcus oceani ATCC 19707]
 gi|254435654|ref|ZP_05049161.1| conserved domain protein, putative [Nitrosococcus oceani AFC27]
 gi|76884758|gb|ABA59439.1| Protein of unknown function DUF81 [Nitrosococcus oceani ATCC 19707]
 gi|207088765|gb|EDZ66037.1| conserved domain protein, putative [Nitrosococcus oceani AFC27]
          Length = 251

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 92/258 (35%), Gaps = 25/258 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   S L+   S   G G GLV +P L       GI        A+ T         + +
Sbjct: 9   LFFISLLANLFSAFSGGGAGLVQLPALIFLGLPFGI--------ALATHKVASVALGIGA 60

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + H R  T+  +     +       +  + +I  +       A     L +GI  L + 
Sbjct: 61  TLRHLREETLERRFALFILACGLPGVIFGANVILKIPARTAEFALGCLTLSLGIYSLLKP 120

Query: 146 RLYCERKFPDNYVK-----YIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATS 199
            L    +  + + +            G L+G+L  G G+F  L ++ ++G    +A A +
Sbjct: 121 NLGQASRLLNRHWRGYLVGGGALFFIGILNGSLTSGTGLFVTLWLVRWFGLDYKRAVAYT 180

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +         +   ++G G   L    LG +    +  +L  S+L   L   LS + G
Sbjct: 181 LVL---------VGLFWNGVGALTL--GWLGNIQWTWLPALLIGSLLGGYLGAHLSIVKG 229

Query: 260 KKYLTIGFSMIMFTTSFV 277
            +++  GF ++       
Sbjct: 230 NRWIKRGFEIVTLLIGLK 247


>gi|254252305|ref|ZP_04945623.1| hypothetical protein BDAG_01525 [Burkholderia dolosa AUO158]
 gi|124894914|gb|EAY68794.1| hypothetical protein BDAG_01525 [Burkholderia dolosa AUO158]
          Length = 268

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 97/276 (35%), Gaps = 40/276 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V     G + GL G GGG++ VP L        +     M  A   +L  +A ++
Sbjct: 1   MLISVVLGGFVGAVLGLTGAGGGILAVPALV-------VGMGWPMQQATPVALVAVAGSA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +E  R   +  +            T + + +   + +  L   FA+  L++   +L
Sbjct: 54  ALGALEGFRRRLVRYRAALLMAAAGVPLTTLGARLAHVLPQRVLLALFALTMLVVAARLL 113

Query: 143 K---------------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
           +                      D       +P        G VTG ++G LGVGGG   
Sbjct: 114 RQALRRACAGSDTSPLCVGRVNPDTGRLVWSWPAALALASTGAVTGLMTGLLGVGGGFVI 173

Query: 182 NLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             ++  +   S++   ATS  V AL+    +   + SG               +  +L  
Sbjct: 174 VPMLRRFTNVSMHGIVATSLMVIALVGTGGVFATLVSGTRAP-----------LDVMLWF 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              + L        S  +  +++  GF+ ++   + 
Sbjct: 223 TAATALGMAAGRGASRRLSARHVQAGFAAVLVCVAL 258



 Score = 46.2 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G   G + G  G GGGI     L++  G  + +A          +A  A+    
Sbjct: 2   LISVVLGGFVGAVLGLTGAGGGILAVPALVVGMGWPMQQA--------TPVALVAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +    V   A L++    + +T L  +L++++ ++ L   F++ M   +
Sbjct: 54  ALG----ALEGFRRRLVRYRAALLMAAAGVPLTTLGARLAHVLPQRVLLALFALTMLVVA 109

Query: 276 FV 277
             
Sbjct: 110 AR 111


>gi|90416698|ref|ZP_01224628.1| hypothetical protein GB2207_03584 [marine gamma proteobacterium
           HTCC2207]
 gi|90331451|gb|EAS46687.1| hypothetical protein GB2207_03584 [marine gamma proteobacterium
           HTCC2207]
          Length = 252

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 69/180 (38%), Gaps = 16/180 (8%)

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY 157
            +    +        +  L +  +D         +   L  I ML   +   + + P  +
Sbjct: 79  SLFWPLVMASTPAAFIGGLWV--IDVLSYRLLVGLLLGLAAIRMLMSHKANQQIQLPALW 136

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIY 216
           +    G + GF +G  G+GGG+F + ++L +G  SI ++TA +AG   L +   L   + 
Sbjct: 137 LVLTVGALLGFSAGLTGIGGGVFLSPILLIFGWCSIRQSTAVAAGFILLNSIAGLAGYVV 196

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS-YMIGKKYLTIGFSMIMFTTS 275
           S        P   G++ + A +  L        L  +L+ +      L    + ++   +
Sbjct: 197 SEQPW----PLGTGWLMLAAFVGCL--------LGAELASHRASSNVLRKLLAGVLIIAA 244



 Score = 40.4 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 8/123 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L++    L G  +GL G+GGG+ + P+L   F    I  S  +          I   S
Sbjct: 135 LWLVLTVGALLGFSAGLTGIGGGVFLSPILL-IFGWCSIRQSTAVAAGF------ILLNS 187

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH-VDKSFLNKAFAIFCLLMGILM 141
           +     +              +    +  ++ + + SH    + L K  A   ++    M
Sbjct: 188 IAGLAGYVVSEQPWPLGTGWLMLAAFVGCLLGAELASHRASSNVLRKLLAGVLIIAAGKM 247

Query: 142 LKR 144
           +  
Sbjct: 248 IFS 250


>gi|119385229|ref|YP_916285.1| hypothetical protein Pden_2502 [Paracoccus denitrificans PD1222]
 gi|119374996|gb|ABL70589.1| protein of unknown function DUF81 [Paracoccus denitrificans PD1222]
          Length = 252

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 79/226 (34%), Gaps = 24/226 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ VP L     L G+  +     A+ T+       +  + + + R G ++++    
Sbjct: 28  GGGLITVPALM----LAGLPPAQ----ALATNKVQGVFGAATAAISYARRGLVDLRQQTG 79

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW 162
              V     +  +L+++ +    L     +  + +      R  L    +          
Sbjct: 80  AAAVAFAAGLCGALLVTWLPAQALRYGLPVVLIGIAAFFALRPGLDDTDRMRRIAPAAFT 139

Query: 163 GMVTGFLS---GALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             V   ++   G +G G G F  L  ++  G  I KATA +  ++       L+     G
Sbjct: 140 ATVVPIVAFYDGLVGPGTGSFFMLGFVMLAGYGILKATAHTKLLNFASNLGGLVAFAAVG 199

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
                 P W +G V       +    I    L  +L+   G + + 
Sbjct: 200 -----KPLWLVGAV-------MALAQIGGAMLGARLAMRTGARVIK 233


>gi|134295794|ref|YP_001119529.1| hypothetical protein Bcep1808_1690 [Burkholderia vietnamiensis G4]
 gi|134138951|gb|ABO54694.1| protein of unknown function DUF81 [Burkholderia vietnamiensis G4]
          Length = 268

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 51/276 (18%), Positives = 100/276 (36%), Gaps = 40/276 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V     G + GL G GGG++ VP L        +     M  A   +L  +A ++
Sbjct: 1   MLISLVLGGFVGAVLGLTGAGGGILAVPALV-------VGMGWPMQQATPVALVAVAGSA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +E  R G +  +            T +   +   + +  L   FA+  L++   +L
Sbjct: 54  ALGALEGFRRGLVRYRAALLMALAGVPLTTLGVRLAHVLPQRVLLALFALTMLIVAARLL 113

Query: 143 K---------------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
           +                      D       +P  +     G VTG ++G LGVGGG   
Sbjct: 114 RQALRQGAGEHDESRLCVGRVNPDTGRLVWSWPVGFALASTGAVTGLMTGLLGVGGGFVI 173

Query: 182 NLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             ++  +   S++   ATS  V AL+    +L    +G               +  +L  
Sbjct: 174 VPMLRKFTNVSMHGVVATSLMVIALVGTGGVLATFVAGTRAP-----------LDMMLWF 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              + L   +    S  +  +++  GF++++   + 
Sbjct: 223 TVATALGMVVGRAASRHLSARHVQAGFAIVLVCVAL 258



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G   G + G  G GGGI     L++  G  + +A          +A  A+    
Sbjct: 2   LISLVLGGFVGAVLGLTGAGGGILAVPALVVGMGWPMQQA--------TPVALVAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +  G V   A L++    + +T L  +L++++ ++ L   F++ M   +
Sbjct: 54  ALG----ALEGFRRGLVRYRAALLMALAGVPLTTLGVRLAHVLPQRVLLALFALTMLIVA 109

Query: 276 FV 277
             
Sbjct: 110 AR 111


>gi|298488038|ref|ZP_07006075.1| putative membrane protein [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298157317|gb|EFH98400.1| putative membrane protein [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 243

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 89/229 (38%), Gaps = 16/229 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++     I    I   +T
Sbjct: 24  AIPALGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALMLIVPSFIFAWLT 83

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSG 171
           SL+   VD   +   F  F +++ +  + +      +           ++ G+ +G   G
Sbjct: 84  SLLAVRVDPQSMRLGFVGFLVVLTVFNVAQMYWRGHQAGSGLRHEKWLWLLGVGSGMTGG 143

Query: 172 ALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
             GVGGG+    ++   +G +   A   +  ++A              + L+    WS+G
Sbjct: 144 LFGVGGGVVATPILTSVFGTTQVVAQGLALSLAAP-----STGITLVTYALHDHVNWSMG 198

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                  + +    +       KL++ + ++ L + F + +   + + A
Sbjct: 199 -------VPLAIGGLASISWGVKLAHSLPERTLRLMFCVFLVLCAVILA 240


>gi|209549397|ref|YP_002281314.1| hypothetical protein Rleg2_1803 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209535153|gb|ACI55088.1| protein of unknown function DUF81 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 262

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 96/277 (34%), Gaps = 38/277 (13%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  L  ++    G L G+ GVGGG +M P+L   F        +    A+GT L   A
Sbjct: 1   MTFEPLYSLSGLFVGALVGITGVGGGSLMTPLLVLLF-------GVHPATAVGTDLLYAA 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIF 133
            T       H  HG +N KI+           ++   +++ VD       + +  A    
Sbjct: 54  ITKTAGTAVHGMHGRVNWKIVGSLAIGSVPAALLMLWLLAGVDRKSIGVTNTITTALGWL 113

Query: 134 CLLMGILMLKR-------DRLYCERKFPDN----YVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++  I+++ R        R   +R  P       +  I G + G L     VG G    
Sbjct: 114 LVMTAIMLVFRGPILELARRAIGDRTPPQPRTILALTVILGFLLGVLVTLTSVGAGALGV 173

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
            ++L       + +   +    +  +                    W +G ++   +  +
Sbjct: 174 TILLVLYPRLDVREIVGSDIVHAVPLTLIGGTGY------------WLIGEIDWPMLFAL 221

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L  SI    + + L+  + ++ + I  +  +   +  
Sbjct: 222 LIGSIPGIIIGSLLAPKLHERTIRIVLAATLAVVAVK 258


>gi|291441670|ref|ZP_06581060.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291344565|gb|EFE71521.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 460

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 71/219 (32%), Gaps = 19/219 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L        +        A   SL ++  TSV +   H R G +  +    +     
Sbjct: 242 VPALIYLLGFTPVA-------ATTASLVIVVFTSVTALSAHARDGHVRWRTGLLFAAAGI 294

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
              ++   +   + ++ L  AFA       + ML+   L               G   G 
Sbjct: 295 GPAMLGGALAGRLPEAALTAAFAGVAAAAALRMLRTRPLADTAAPVRPGRAAAAGAGLGA 354

Query: 169 LSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           ++G LGVGGG      ++   G  +  A  TS  V  + +   L+           +   
Sbjct: 355 VTGVLGVGGGFLAVPALVGVLGLRMRDAVGTSLLVITVNSLATLV-----------MRAG 403

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           ++  ++   V   +  + L      +L+     + L   
Sbjct: 404 TVDRLDWAVVGPFIGAATLGAWDGKRLAAKASGRVLQRI 442



 Score = 45.4 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 12/87 (13%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN---MKILKD 102
            + VP L            + M  A+GTSL VI   S+ + +   R GT++     ++  
Sbjct: 365 FLAVPALVGVL-------GLRMRDAVGTSLLVITVNSLATLV--MRAGTVDRLDWAVVGP 415

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKA 129
           +I    +       + +      L + 
Sbjct: 416 FIGAATLGAWDGKRLAAKASGRVLQRI 442


>gi|291301251|ref|YP_003512529.1| hypothetical protein Snas_3779 [Stackebrandtia nassauensis DSM
           44728]
 gi|290570471|gb|ADD43436.1| protein of unknown function DUF81 [Stackebrandtia nassauensis DSM
           44728]
          Length = 298

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 84/258 (32%), Gaps = 23/258 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +I      +  + G  G+G G++    L     L     S  +H+A          T+
Sbjct: 4   LIIIAFVGIAAQLIDGGLGMGYGVIST-SLLLLASLNPAAASASVHLAE-------IGTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS----FLNKAFAIFCLLMG 138
           ++S   H + G I+  ++        +   + +  +S +       + +    +    + 
Sbjct: 56  LVSGASHWKFGNIDWNVVARIAVPGAVGAFIGAYALSSIPADNAKPWTSGILLLLGAYLL 115

Query: 139 ILMLKRDRL-YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKAT 196
           I   +        +  P +      G+V G +    G G G      +L        K  
Sbjct: 116 IRFSRGHAPVDPTKPPPRSKFLVPLGLVAGTVDATGGGGWGPIATPTLLASKRLDPKKII 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            + +     +A  A     + G  ++G        V    V  +L   ++  P+A  L  
Sbjct: 176 GSVSAAEFAVAIAATAGFGF-GSAIDG--------VVWPTVAALLIGGVIAAPIAAWLVR 226

Query: 257 MIGKKYLTIGFSMIMFTT 274
            +  + L +    I+  T
Sbjct: 227 RLPTRILGVAVGGIIVGT 244


>gi|224368721|ref|YP_002602882.1| putative permease [Desulfobacterium autotrophicum HRM2]
 gi|223691437|gb|ACN14720.1| putative permease [Desulfobacterium autotrophicum HRM2]
          Length = 249

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 96/262 (36%), Gaps = 24/262 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +I +I   SF       L GVG  ++++P L+           +  ++A  T L V   
Sbjct: 3   SHILIIAFLSFCLSFFFALGGVGSAVILIPALTWI--------GVPFNLARPTGLFVNCL 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           + + +   + R   +++K+    I    +   V +     +    L   F  F L  G +
Sbjct: 55  SMLGATWSNFREKKLDVKLGLPIIVSSMVMAPVGAWAGHFLPTQTLLFVFIGFLLFSGSM 114

Query: 141 MLKRDRLYCERKFPDN---YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           M+         ++ ++         G++ GF+SG LGVGGG   + LM+  G +  K   
Sbjct: 115 MIFFKSSKYADQYREDRPVAGPSGVGVLAGFVSGLLGVGGGGIISPLMVVQGFNPKKVAM 174

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK-LSY 256
            +A      +F A +     G             V++  ++     +     L T+ +  
Sbjct: 175 VTAFSVPFSSFSAFITYAAMGS------------VSVKILVFAGLAAWTGGYLGTRVMQK 222

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            +  + +      ++    F F
Sbjct: 223 KMNPQSVKRVLGSVLILIGFKF 244


>gi|330813138|ref|YP_004357377.1| putative transmembrane permease [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486233|gb|AEA80638.1| putative transmembrane permease [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 352

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 60/305 (19%), Positives = 106/305 (34%), Gaps = 55/305 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           L ++L    V   I  ++  S + G  +GL G+GGG ++ P+L       GI        
Sbjct: 2   LQIYLPIAEVTINIATLLFISVIVGFFAGLLGIGGGFLLTPILIFL----GIPPIY---- 53

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-----DKS 124
           A+      I   SV   + H     +++K+    I       +    +  +         
Sbjct: 54  AVANGANNILAASVSGTIGHWFKDQLDIKMGMLIIIGGVSGAIFGIFVFKYFLLQGSVNK 113

Query: 125 FLNKAFAIFCLLMGILML------------------------------KRDRLYCERKFP 154
            ++  + I    +G+ ML                               + R++  + + 
Sbjct: 114 IISIMYCILLSGIGLSMLIESLIEIRRIRLNRFIRRKLHTHYWVHNLPFKIRIHKSKLYI 173

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLV 213
                  +G+V G LS  LGVGGG     +M++  G        TS  V   I     L+
Sbjct: 174 SIVPPIFFGIVVGILSSMLGVGGGFLLVPIMIYILGMPARLVAGTSLFVMIFIMIVVTLL 233

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
              +              V+I  VLI++  S +   L TK+S  +  + L    S+++  
Sbjct: 234 HAINHNS-----------VDIFLVLILVVGSGIGAQLGTKISIKLKGEELRAMMSVLVLI 282

Query: 274 TSFVF 278
             F F
Sbjct: 283 FGFKF 287



 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 56/138 (40%), Gaps = 8/138 (5%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           ++N    + + K  +   I   I    + G LS + GVGGG ++VP++            
Sbjct: 157 VHNLPFKIRIHKSKLYISIVPPIFFGIVVGILSSMLGVGGGFLLVPIMIYIL-------G 209

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHR-RHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           +   +  GTSL V+    ++  + H   H ++++ ++   +    I   + + +   +  
Sbjct: 210 MPARLVAGTSLFVMIFIMIVVTLLHAINHNSVDIFLVLILVVGSGIGAQLGTKISIKLKG 269

Query: 124 SFLNKAFAIFCLLMGILM 141
             L    ++  L+ G   
Sbjct: 270 EELRAMMSVLVLIFGFKF 287


>gi|289626943|ref|ZP_06459897.1| hypothetical protein PsyrpaN_17649 [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|320323329|gb|EFW79417.1| hypothetical protein PsgB076_18281 [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|330866121|gb|EGH00830.1| hypothetical protein PSYAE_02477 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330889321|gb|EGH21982.1| hypothetical protein PSYMO_10935 [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 243

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 89/229 (38%), Gaps = 16/229 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++     I    I   +T
Sbjct: 24  AIPALGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALMLIVPSFIFAWLT 83

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSG 171
           SL+   VD   +   F  F +++ +  + +      +           ++ G+ +G   G
Sbjct: 84  SLLAVRVDPQSMRLGFVGFLVVLTVFNVAQMYWRGHQAGSGLRHEKWLWLLGVGSGMTGG 143

Query: 172 ALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
             GVGGG+    ++   +G +   A   +  ++A              + L+    WS+G
Sbjct: 144 LFGVGGGVVATPILTSVFGTTQVVAQGLALSLAAP-----STGITLVTYALHDHVNWSMG 198

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                  + +    +       KL++ + ++ L + F + +   + + A
Sbjct: 199 -------IPLAIGGLASISWGVKLAHSLPERTLRLMFCVFLVLCAVILA 240


>gi|148979739|ref|ZP_01815676.1| hypothetical protein VSWAT3_08241 [Vibrionales bacterium SWAT-3]
 gi|145961622|gb|EDK26921.1| hypothetical protein VSWAT3_08241 [Vibrionales bacterium SWAT-3]
          Length = 259

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 81/210 (38%), Gaps = 16/210 (7%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  +     R+G +++K ++  I    I + + + ++  +D S L   
Sbjct: 46  ALATNKLQSSFGSFSASWYFVRNGIVSIKEMRLAILCTFIGSAIGAELVQFIDASLLTSV 105

Query: 130 FAIFCLLMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
             +  + + +  L   +      ++K  +       G   GF  G  G G G    +  +
Sbjct: 106 IPLLLIAISLYFLLAPQTRASEGKQKISEAMFALCVGGGVGFYDGFFGPGTGSIFTMCFV 165

Query: 187 FYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
             G  S+  ATA +  ++      AL+  I +G     LP W LG       L++     
Sbjct: 166 AIGHFSLVDATARTKVLNFTSNIAALIFFILAG-----LPIWELG-------LVMAIGGF 213

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +   L  K+    G+K++     ++    +
Sbjct: 214 MGAQLGAKVVVTKGQKWIRPLVIVMSMLMA 243


>gi|208434173|ref|YP_002265839.1| hypothetical protein HPG27_206 [Helicobacter pylori G27]
 gi|208432102|gb|ACI26973.1| hypothetical protein HPG27_206 [Helicobacter pylori G27]
          Length = 277

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 75/215 (34%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G ++++          +  ++ S ++  +D   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLREGSFAALGGLMGAILGSFILKIIDDKILMSVFVVVVCYTFIKYAFS 119

Query: 145 DRLYCE-------------------RKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
           +    E                   R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 NNKKPEHFEEMHFDLHANNKTPEKKRAIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|255086753|ref|XP_002509343.1| predicted protein [Micromonas sp. RCC299]
 gi|226524621|gb|ACO70601.1| predicted protein [Micromonas sp. RCC299]
          Length = 248

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 7/117 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   +      G  SG  G+G G +M    S    L G      M   +GTS+       
Sbjct: 127 IAYYVGLGAAVGVASGALGIGAGTMM----SVGLALAGNMPHKTM---LGTSMVAQIGPG 179

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           +     H R G + + ++        + + VTS +   + +  L  AFA F   +G+
Sbjct: 180 LAGAWAHARLGNLRLDLVPALAGGAMVGSFVTSEVAVDLPEEGLRAAFAAFVAGLGM 236


>gi|319779500|ref|YP_004130413.1| Putative membrane protein YfcA [Taylorella equigenitalis MCE9]
 gi|317109524|gb|ADU92270.1| Putative membrane protein YfcA [Taylorella equigenitalis MCE9]
          Length = 254

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 81/210 (38%), Gaps = 15/210 (7%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMHVAMG 72
           +  D  +  + L+     ++G +  + G GGGL+ +PVL  +   L+ +     +    G
Sbjct: 1   MELDFSLMQLVLLFSVGLIAGFIDSIAG-GGGLITIPVLMLSNVPLISMLAVNKIQGVAG 59

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           +S   +            +   I  + +        +   + ++ I   ++  L+    I
Sbjct: 60  SSTATLTMI---------KKRVIKFEDVWKPFLASFVGAAIGAIAIQFFNEKALSIIIPI 110

Query: 133 FCLLMGILMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFY 188
             L +G   L    +     E +  ++   Y      GF  GA G G G F +L  +L  
Sbjct: 111 VLLGIGFYYLLTPSIGSVEVEPRLSESKFNYGVVPGIGFYDGAFGPGTGSFFSLSYILLR 170

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSG 218
           G  I +AT ++  ++      ++LV +  G
Sbjct: 171 GKKIIEATGSAKALNFASNIGSMLVFVIGG 200


>gi|257458948|ref|ZP_05624068.1| hypothetical protein CAMGR0001_1881 [Campylobacter gracilis RM3268]
 gi|257443652|gb|EEV18775.1| hypothetical protein CAMGR0001_1881 [Campylobacter gracilis RM3268]
          Length = 243

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 56/153 (36%), Gaps = 1/153 (0%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +  A G S+  +   S+     + R G + +               ++  ++ +  +  L
Sbjct: 37  VKTAAGISVMQMFIVSLFGSYLNYRAGKLRLDSGIAVGLGGLCGASISGFIVKYSPEIVL 96

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
                +   +  + +   +        P     +  G V G ++ ++GVGG +F   +++
Sbjct: 97  EIGLLLTLAISFLKLFSTNVTSGGNADPHGAALFFIGFVIGAIALSMGVGGAVFLTPVLV 156

Query: 187 -FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            F G  I +A           +F ALL   Y+G
Sbjct: 157 GFLGVDIKRAVCMGLFFIVFGSFSALLSLSYNG 189


>gi|153855323|ref|ZP_01996472.1| hypothetical protein DORLON_02486 [Dorea longicatena DSM 13814]
 gi|149752143|gb|EDM62074.1| hypothetical protein DORLON_02486 [Dorea longicatena DSM 13814]
          Length = 250

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 71/205 (34%), Gaps = 15/205 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    ++    FL+G +  + G GGGL+ +P    A         I +H A+ T+    A
Sbjct: 3   LHEFLIVCPMVFLAGFVDAIAG-GGGLISLPAYMFA--------GIPVHHAIATNKLSSA 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             + +S     +   +++ ++   +    + ++  + +   +    L         ++  
Sbjct: 54  TGTAVSTWHLVKSKCVDIFLVPGTVACAFVGSIAGANLALIISDKVLKTVLVFVLPVVAF 113

Query: 140 LMLKRDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIY 193
            +L+   L               +      V G   G  G G G F  L     G   + 
Sbjct: 114 CVLRDKDLKPVIPEGFTRKKQYLIMAACSFVIGIYDGFYGPGTGTFLLLAFTKLGKLDME 173

Query: 194 KATATSAGVSALIAFPALLVRIYSG 218
           KAT     V+      AL+  I +G
Sbjct: 174 KATGNVKVVNLTSNISALITFILAG 198


>gi|145224075|ref|YP_001134753.1| hypothetical protein Mflv_3491 [Mycobacterium gilvum PYR-GCK]
 gi|315444412|ref|YP_004077291.1| permease [Mycobacterium sp. Spyr1]
 gi|145216561|gb|ABP45965.1| protein of unknown function DUF81 [Mycobacterium gilvum PYR-GCK]
 gi|315262715|gb|ADT99456.1| predicted permease [Mycobacterium sp. Spyr1]
          Length = 311

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 82/259 (31%), Gaps = 23/259 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +    +  + G  G+  G+     L     +     S  +H+A          T+
Sbjct: 4   LLIFTLVGAGAQLVDGALGMAFGVTAT-TLLVLSGVGAAQASAAVHLAE-------VGTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H +   I+  ++        +   + + ++S +         A   + +G  +L
Sbjct: 56  FASGVSHWKFKNIDWALVLKLGGPGAVGAFLGATVLSSLSSEHAAPLMAGILVAIGTYVL 115

Query: 143 KRDRLYCERKFP------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKA 195
            R  L     F               G+  GF+  + G G G  T   +L  G  +    
Sbjct: 116 LRFSLRTPLTFGARGASHSTKFLAPLGLFGGFIDASGGGGWGPVTTSTLLSQGKTAPRTV 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             + +    L+A  A L  +  G     L        N   V+ ++   ++  P A  L 
Sbjct: 176 IGSVSASEFLVAVSASLGFLI-GLRQEFLE-------NWPVVVGLMVGGVIAAPFAAWLV 227

Query: 256 YMIGKKYLTIGFSMIMFTT 274
             +    L      ++  T
Sbjct: 228 SRVSPALLGTAVGGVIVLT 246


>gi|255320186|ref|ZP_05361371.1| hypothetical protein ACIRA0001_1984 [Acinetobacter radioresistens
           SK82]
 gi|262380403|ref|ZP_06073557.1| permease [Acinetobacter radioresistens SH164]
 gi|255302625|gb|EET81857.1| hypothetical protein ACIRA0001_1984 [Acinetobacter radioresistens
           SK82]
 gi|262297849|gb|EEY85764.1| permease [Acinetobacter radioresistens SH164]
          Length = 258

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 96/264 (36%), Gaps = 25/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I  ++  +F +G +    G GGGL+ +P L      MG    +      GT+     
Sbjct: 3   IEIIISLVFFAFCAGLIDAAVG-GGGLIQIPAL------MGTFPHLPPATIFGTNKLASI 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  +   + R      K+L        +++ + +  +S +  S L     +  ++M +
Sbjct: 56  AGTASAAFSYARRVRFVWKLLVVIASCAFVSSFIGAACVSMIPVSVLRPLVLLMLIIMAV 115

Query: 140 LMLKRD---RLYCERKFPDNYVKYIW--GMVTGFLSGALGVG-GGIFTNLLMLFYGASIY 193
               +    +++ ER    +++       ++ GF  G  G G G  F    + F      
Sbjct: 116 YTFMKKQFGQVHTERPVNSSFLLMAALGSILIGFYDGIFGPGTGSFFIFFFIRFLSVDFL 175

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+A S   + +    AL   I +            G V  G  L +   +I  + +  +
Sbjct: 176 HASALSKIGNLMTNLAALSFFIPT------------GHVLFGIGLGMALANIFGSLMGVR 223

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           L+   G   + I F +++      
Sbjct: 224 LALKYGSGLIRILFLILVSILIIR 247


>gi|197106230|ref|YP_002131607.1| hypothetical protein PHZ_c2769 [Phenylobacterium zucineum HLK1]
 gi|196479650|gb|ACG79178.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 269

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 8/150 (5%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           LY   L +   +  +   +   +V     G LS + GVGGG V+VP +    +       
Sbjct: 119 LYGLPLKMRFPRSRLYISVIPPLVLGAFVGVLSAIMGVGGGFVLVPAMVYILR------- 171

Query: 65  ICMHVAMGTSLGVIAPTS-VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           +   V +GTSL  I  T+ +   ++  R+ T+++ +    +    +     +   +    
Sbjct: 172 MPAGVVVGTSLLQIIVTAVLTGVLQAGRNQTVDIVLATLLLLGGIVGAQYGARASARFRA 231

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
             L    A+  L +G+ M     +  E  F
Sbjct: 232 EELRAVLALIVLFVGLRMGLGLFIAPEEPF 261



 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 83/268 (30%), Gaps = 56/268 (20%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L       GI  +    VA+ +    +A +S+ S + + R   +++++        
Sbjct: 1   MTPMLVFL----GIPPA----VAVASMSNHVAASSMSSVIAYGRRRAVDLRMGGVLAAGG 52

Query: 108 PITTVVTSLMISHVD-----KSFLNKAFAIFCLLMGILML-------------------- 142
            +   +   +   +         ++ ++ +F  ++G LML                    
Sbjct: 53  VVGAFLGVELFRLLRLLGQADLVVSVSYLVFLSIIGGLMLTESLGAILRRRRGEPNPPRR 112

Query: 143 -----------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGA 190
                       + R    R +       + G   G LS  +GVGGG      M++    
Sbjct: 113 DRRPPWLYGLPLKMRFPRSRLYISVIPPLVLGAFVGVLSAIMGVGGGFVLVPAMVYILRM 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
                  TS     + A   L   + +G             V+I    ++L   I+    
Sbjct: 173 PAGVVVGTSLLQIIVTAV--LTGVLQAGRNQT---------VDIVLATLLLLGGIVGAQY 221

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             + S     + L    ++I+       
Sbjct: 222 GARASARFRAEELRAVLALIVLFVGLRM 249


>gi|240949364|ref|ZP_04753706.1| hypothetical protein AM305_10481 [Actinobacillus minor NM305]
 gi|240296214|gb|EER46867.1| hypothetical protein AM305_10481 [Actinobacillus minor NM305]
          Length = 266

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 90/218 (41%), Gaps = 15/218 (6%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
           N  +   +  +  +  +CL++VASF++G +  + G G GL+++P     F ++G+     
Sbjct: 3   NLFIENSIIANYFIIGLCLLVVASFVAGYIDSIAG-GAGLILIPA----FLMVGLPP--- 54

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
             +A+G    V    ++ +     +  +I  KI+   I    +   + + +I  +    +
Sbjct: 55  -QLALGQEKLVSTIGTIAAIKNFMKSDSIIWKIVPIGIISALLGAYIGAEVILMLPTHVI 113

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM-----VTGFLSGALGVG-GGIF 180
           +     F  L     L + +L  ++       K I  +     + GF  G  G G G IF
Sbjct: 114 SYIIFAFLPLGLGATLFKGKLIKQQSETTEIKKSILAVFVTCLIVGFYDGFFGPGTGSIF 173

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
              L +    S+ +A+ATS   +      A +    +G
Sbjct: 174 IIALFMINKLSLLQASATSKIFNFSSNIGAFVSFAIAG 211


>gi|327537537|gb|EGF24256.1| membrane protein containing DUF81 [Rhodopirellula baltica WH47]
          Length = 274

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 100/279 (35%), Gaps = 46/279 (16%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I+   + G   GL G GGG+  VP+L           SI    A+G SL  +  T++ 
Sbjct: 4   LAILFGCIVGFALGLTGGGGGVFAVPLLVY-------GMSIAPREAVGISLASVGGTALF 56

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +    HG + ++    +     +   V S + S V ++ L   FA+  L++   M  +
Sbjct: 57  GAVPRLIHGEVELRTGLLFAIAGMMGAPVGSYLSSLVPETALLLMFAVLMLVVAYRMWAK 116

Query: 145 DRLYCERK---------------------------FPDNYVKYIWGMVTGFLSGALGVGG 177
            +                                      +  + G++TG LSG  GVGG
Sbjct: 117 TKDPSIVSGVCNSEASLERDRSACQRDEDGTLRLTSRCARLLVLVGLMTGVLSGLFGVGG 176

Query: 178 GIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G      ++ + G  I++A  TS  V  L++   +   + SG             ++I  
Sbjct: 177 GFVIVPALVLFSGMEIHRAVGTSLFVIVLVSVSGVASHLLSGNE-----------LSIST 225

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            L+          L   ++  +    L   FS+ +   +
Sbjct: 226 ALLFTTGGFAGMWLGGIVAKRLEGPTLQKVFSIAVVLVA 264



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 8/122 (6%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+++   ++G LSGLFGVGGG V+VP L            + +H A+GTSL VI   SV 
Sbjct: 157 LLVLVGLMTGVLSGLFGVGGGFVIVPALVLF-------SGMEIHRAVGTSLFVIVLVSVS 209

Query: 85  SFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
               H   G  +++     +         +  ++   ++   L K F+I  +L+   +L 
Sbjct: 210 GVASHLLSGNELSISTALLFTTGGFAGMWLGGIVAKRLEGPTLQKVFSIAVVLVATFVLV 269

Query: 144 RD 145
           + 
Sbjct: 270 KS 271



 Score = 35.4 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 50/122 (40%), Gaps = 13/122 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIY 216
           +  ++G + GF  G  G GGG+F   L+++    +  +A   S       A    + R+ 
Sbjct: 4   LAILFGCIVGFALGLTGGGGGVFAVPLLVYGMSIAPREAVGISLASVGGTALFGAVPRLI 63

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            G             V +   L+     ++  P+ + LS ++ +  L + F+++M   ++
Sbjct: 64  HGE------------VELRTGLLFAIAGMMGAPVGSYLSSLVPETALLLMFAVLMLVVAY 111

Query: 277 VF 278
             
Sbjct: 112 RM 113


>gi|313773526|gb|EFS39492.1| integral membrane family protein [Propionibacterium acnes HL074PA1]
 gi|313793982|gb|EFS42006.1| integral membrane family protein [Propionibacterium acnes HL110PA1]
 gi|313801369|gb|EFS42620.1| integral membrane family protein [Propionibacterium acnes HL110PA2]
 gi|313807952|gb|EFS46433.1| integral membrane family protein [Propionibacterium acnes HL087PA2]
 gi|313811579|gb|EFS49293.1| integral membrane family protein [Propionibacterium acnes HL083PA1]
 gi|313813361|gb|EFS51075.1| integral membrane family protein [Propionibacterium acnes HL025PA1]
 gi|313822155|gb|EFS59869.1| integral membrane family protein [Propionibacterium acnes HL036PA1]
 gi|313823611|gb|EFS61325.1| integral membrane family protein [Propionibacterium acnes HL036PA2]
 gi|313825934|gb|EFS63648.1| integral membrane family protein [Propionibacterium acnes HL063PA1]
 gi|313831319|gb|EFS69033.1| integral membrane family protein [Propionibacterium acnes HL007PA1]
 gi|313839910|gb|EFS77624.1| integral membrane family protein [Propionibacterium acnes HL086PA1]
 gi|314924646|gb|EFS88477.1| integral membrane family protein [Propionibacterium acnes HL036PA3]
 gi|314962087|gb|EFT06188.1| integral membrane family protein [Propionibacterium acnes HL002PA2]
 gi|314963666|gb|EFT07766.1| integral membrane family protein [Propionibacterium acnes HL082PA1]
 gi|314974194|gb|EFT18290.1| integral membrane family protein [Propionibacterium acnes HL053PA1]
 gi|314976697|gb|EFT20792.1| integral membrane family protein [Propionibacterium acnes HL045PA1]
 gi|314978819|gb|EFT22913.1| integral membrane family protein [Propionibacterium acnes HL072PA2]
 gi|314984335|gb|EFT28427.1| integral membrane family protein [Propionibacterium acnes HL005PA1]
 gi|314986524|gb|EFT30616.1| integral membrane family protein [Propionibacterium acnes HL005PA2]
 gi|314990883|gb|EFT34974.1| integral membrane family protein [Propionibacterium acnes HL005PA3]
 gi|315081254|gb|EFT53230.1| integral membrane family protein [Propionibacterium acnes HL078PA1]
 gi|315083452|gb|EFT55428.1| integral membrane family protein [Propionibacterium acnes HL027PA2]
 gi|315087138|gb|EFT59114.1| integral membrane family protein [Propionibacterium acnes HL002PA3]
 gi|315089310|gb|EFT61286.1| integral membrane family protein [Propionibacterium acnes HL072PA1]
 gi|315095333|gb|EFT67309.1| integral membrane family protein [Propionibacterium acnes HL038PA1]
 gi|315106773|gb|EFT78749.1| integral membrane family protein [Propionibacterium acnes HL030PA1]
 gi|327328404|gb|EGE70166.1| putative integral membrane protein [Propionibacterium acnes
           HL096PA2]
 gi|327329730|gb|EGE71486.1| putative integral membrane protein [Propionibacterium acnes
           HL096PA3]
 gi|327334247|gb|EGE75961.1| putative integral membrane protein [Propionibacterium acnes
           HL097PA1]
 gi|327444191|gb|EGE90845.1| integral membrane family protein [Propionibacterium acnes HL043PA2]
 gi|327444930|gb|EGE91584.1| integral membrane family protein [Propionibacterium acnes HL043PA1]
 gi|327446415|gb|EGE93069.1| integral membrane family protein [Propionibacterium acnes HL013PA2]
 gi|327451996|gb|EGE98650.1| integral membrane family protein [Propionibacterium acnes HL092PA1]
 gi|328752170|gb|EGF65786.1| integral membrane family protein [Propionibacterium acnes HL020PA1]
 gi|328760062|gb|EGF73642.1| putative integral membrane protein [Propionibacterium acnes
           HL099PA1]
          Length = 241

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 89/240 (37%), Gaps = 21/240 (8%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+M+P L     L+G+     +   +GT+       ++ + + + R    + ++   
Sbjct: 11  GGGLIMLPSL-----LVGLPTETPVATIVGTNKVAQVVGNLTAGVGYLRKQRPDWRMFLW 65

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD---NYVK 159
              +  +  V+ + +++++ ++       +  +++GI   +R  L             + 
Sbjct: 66  TAVLAGLGAVLGARIVTYMSRAVYTPILLVVLVIIGIYTWRRPSLGAGHNGEGGKHPILV 125

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
            I G+  G   GA+G G G F  L  +   G S  KA+  +   +A+     +       
Sbjct: 126 PIIGLFLGCYDGAIGPGVGTFWVLTYVAVGGYSFLKASGMAKICNAVTNLVTITTLAIH- 184

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                      G V       ++  ++L   +  + +   G  ++   F ++    +   
Sbjct: 185 -----------GHVWWHIAWPLVISNVLGGLIGARTAMKHGNGFVRTMFLIVTSVLAVRM 233


>gi|257890307|ref|ZP_05669960.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257826667|gb|EEV53293.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
          Length = 275

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 24/252 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  V   L+ T+  + G+GGG+++ P+L        I       ++  +++ V   + V
Sbjct: 1   MIYFVVIVLANTVGAISGMGGGVLIKPILDL------IGAHSVAGISFYSTVAVFTMSIV 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------LNKAFAIFCLL 136
            +  +     ++N +I+        +  VV +++     + F       L + F     L
Sbjct: 55  STVRQVSSGKSLNWQIVGWVSSGAVVGGVVGNIVFEVFLQLFENEKHVQLIQIFLTVLTL 114

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           +            +          I G V GFL+  LG+GGG     LLML +   I +A
Sbjct: 115 V-FAFFYTKHHQPKFHLTSWTWYLICGGVLGFLASFLGIGGGPVNVSLLMLMFSLPIKEA 173

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           T  S           L+    +          S    ++  +  ++P +++      + S
Sbjct: 174 TLYSLSTIFFSQLAKLVTIALTS---------SFMRFDLSMLFYVIPAAVIGGLWGARFS 224

Query: 256 YMIGKKYLTIGF 267
            ++  K +T  F
Sbjct: 225 RVLSPKKVTFIF 236


>gi|126440172|ref|YP_001059153.1| hypothetical protein BURPS668_2118 [Burkholderia pseudomallei 668]
 gi|126219665|gb|ABN83171.1| putative membrane protein [Burkholderia pseudomallei 668]
          Length = 268

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 98/274 (35%), Gaps = 40/274 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V   + G + GL G GGG++ VP L        +     M  A   +L  +A ++
Sbjct: 1   MLISLVLGSIVGAVLGLTGAGGGILAVPALV-------VGMGWPMQQATPVALVAVAGSA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +E  R G +  +            T +   +   + +  L   FA+  L++   +L
Sbjct: 54  ALGALEGFRRGLVRYRAAFLMAASGVPLTTLGVRVAHRLPQRVLLALFALVMLVVAARLL 113

Query: 143 K---------------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
           +                      D       +P        G +TG ++G LGVGGG   
Sbjct: 114 RQALRHAAGEPACSPLCVGRVNPDTGRLVWSWPAGIALASTGALTGLMTGLLGVGGGFVI 173

Query: 182 NLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             ++  +   +++   ATS  V AL+    ++  I SG               +   L  
Sbjct: 174 VPMLRKFTNVTMHGIVATSLMVIALVGTGGVIATIASGTPAP-----------LDVTLWF 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
              + L       +S  +  +++ +GF+  +   
Sbjct: 223 TATTALGMAAGRWVSRYLSARHVQLGFAAALVCV 256



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 49/122 (40%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G + G + G  G GGGI     L++  G  + +A          +A  A+    
Sbjct: 2   LISLVLGSIVGAVLGLTGAGGGILAVPALVVGMGWPMQQA--------TPVALVAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +  G V   A  ++    + +T L  ++++ + ++ L   F+++M   +
Sbjct: 54  ALG----ALEGFRRGLVRYRAAFLMAASGVPLTTLGVRVAHRLPQRVLLALFALVMLVVA 109

Query: 276 FV 277
             
Sbjct: 110 AR 111


>gi|332828327|gb|EGK01036.1| hypothetical protein HMPREF9455_02558 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 253

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 75/204 (36%), Gaps = 15/204 (7%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + +I    F+SG +  + G GGGL+ +P  + A         +  H A+GT+      
Sbjct: 5   EQLLIICPLIFISGFIDSIAG-GGGLISLPAYNVA--------GLSPHFALGTNKFSSCI 55

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  S M   R+ + ++      I    I + + S +   +D   L         ++ I+
Sbjct: 56  GTFFSTMRFVRNKSYDLTSAIPSILFAFIGSAIGSKIAVCLDAGILRYILIAGIPVIAIV 115

Query: 141 MLKRDR-----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYK 194
           + K+            K     +  + G V G   G  G G G F  L      G  +  
Sbjct: 116 VFKKKNFSNIVPKKLSKVKIITLSSLIGFVIGGYDGFFGPGTGTFLILAYTSVLGLDLLT 175

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           +   +  V+      +L+V +  G
Sbjct: 176 SMGNAKLVNLTSNLASLIVFLIEG 199


>gi|261253795|ref|ZP_05946368.1| hypothetical protein VIA_003822 [Vibrio orientalis CIP 102891]
 gi|260937186|gb|EEX93175.1| hypothetical protein VIA_003822 [Vibrio orientalis CIP 102891]
          Length = 259

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 93/252 (36%), Gaps = 25/252 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  ++ + ++   + ++G +  + G                   +   +    A+ T+  
Sbjct: 2   ELTLEILTILFFVATVAGFIDAMAG---------GGGLLTLPALLAAGVPPTQALATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  S  +     R+G +++K ++  I    I + V +  + ++D   L     +  + 
Sbjct: 53  QSSFGSFSASWYFVRNGIVSIKEMRVAIACTFIGSAVGAEAVQYIDAGVLTSLIPLLLVA 112

Query: 137 MGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
           + +  L   +   +    K  +    +  G   GF  G  G G G IFT   +     S+
Sbjct: 113 ISLYFLLMPKTREQSGKAKISEAMFAFSVGGGVGFYDGFFGPGTGSIFTVCFVALGHFSL 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             ATA +  ++      ALL  I +G     LP W LG       L++     +   L  
Sbjct: 173 VDATARTKVLNFTSNIAALLFFILAG-----LPIWELG-------LVMAVGGFMGAQLGA 220

Query: 253 KLSYMIGKKYLT 264
           K+    G+K++ 
Sbjct: 221 KVVVSKGQKWIR 232


>gi|255535386|ref|YP_003095757.1| hypothetical protein FIC_01247 [Flavobacteriaceae bacterium
           3519-10]
 gi|255341582|gb|ACU07695.1| Membrane protein, putative [Flavobacteriaceae bacterium 3519-10]
          Length = 265

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 96/264 (36%), Gaps = 25/264 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +  + +A+F +G +  + G GGGL+  P+       +     + +   +G+       
Sbjct: 12  EILIYLCLAAFAAGFIDAVVG-GGGLIQTPL------ALAFLPHLPVATVIGSLKVPAFS 64

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            + ++  ++ +   I+ K+L     +  ++  + S +++ V   F+        + + + 
Sbjct: 65  GTAIATSQYLKMVKIDWKLLILMAVLAFVSAFLGSRLLTIVSNEFMKPVLLFVLIALALY 124

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVT-----GFLSGALGVGGGIFTNL-LMLFYGASIYK 194
            + +       +    Y   I          GF  G +G   G F  L  +   G    K
Sbjct: 125 TIFKKNFGNATEKKIPYHIAIINGCIASIAVGFYDGFIGPATGTFFILAFVTLLGMDFLK 184

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A +  ++      ++ + +  G             +     L +   + L   + ++L
Sbjct: 185 ASANAKLINLATNAGSICLFLLKGQ------------IIWAIALPMAVCNALGGLVGSRL 232

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
           +   G K++ + F  ++      F
Sbjct: 233 AIRRGNKFIRLLFIFVLVLAIGRF 256


>gi|262370639|ref|ZP_06063964.1| permease [Acinetobacter johnsonii SH046]
 gi|262314439|gb|EEY95481.1| permease [Acinetobacter johnsonii SH046]
          Length = 255

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 93/266 (34%), Gaps = 25/266 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D I  +I  +F +G +    G GGGL+ +P L  AF       S+      GT+     
Sbjct: 3   IDIIISLIFFAFCAGAIDAAVG-GGGLIQIPALMNAF------PSMAPATLFGTNKLAAV 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  S +   R      K+L        I++   +  ++ + K  L     +  ++M +
Sbjct: 56  VGTATSAVSFARKVRFEWKLLAVVAVCATISSFGGAASVAMIPKEVLQPFVLLMLIVMAV 115

Query: 140 LMLKRD-----RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             L +       +          +  +  +  GF  G  G G G F     + Y      
Sbjct: 116 YTLMKKQFGQVHMAQTVTPKILLLAGLGSLAIGFYDGLFGPGTGSFFIFYFIRYLRVDFL 175

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A A +   + +    AL   I SG        +++G         +   +++ +    K
Sbjct: 176 HAAALAKIGNVMTNLAALSFFIPSG-----HVLFAVG-------GTMAVANMIGSICGVK 223

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVFA 279
           ++   G  ++ I F +++       +
Sbjct: 224 MALKYGSGFIRILFLILVTILILRLS 249


>gi|118576383|ref|YP_876126.1| permease [Cenarchaeum symbiosum A]
 gi|118194904|gb|ABK77822.1| permease [Cenarchaeum symbiosum A]
          Length = 249

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 16/178 (8%)

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           R   I+ +       +    TV+ +L  +          F I  +     +L   R+   
Sbjct: 63  RQKRIDYRTGLTLGLLALPGTVLGALFSAAATPDIFRLFFGIVLVGSAAYLLLSSRIGEG 122

Query: 151 R---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALI 206
           +         +        G +S   G+GGG+    LM+   G S+++A  T+  V   +
Sbjct: 123 QRRSHLTVLLLSIAASFFAGIISSFFGIGGGLVFVPLMVAIMGMSMWRAAPTAQLVLMFV 182

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           AF  ++     G                   L++   + +   L  KLS  + ++ L 
Sbjct: 183 AFTGMVTHTLLGHPDFYH------------ALLLSSGAFVGGLLGAKLSLNLRERGLR 228



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 7/108 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L I ASF +G +S  FG+GGGLV VP++            + M  A  T+  V+ 
Sbjct: 128 LTVLLLSIAASFFAGIISSFFGIGGGLVFVPLMVAIM-------GMSMWRAAPTAQLVLM 180

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
             +    + H   G  +            +  ++ + +  ++ +  L 
Sbjct: 181 FVAFTGMVTHTLLGHPDFYHALLLSSGAFVGGLLGAKLSLNLRERGLR 228


>gi|239979316|ref|ZP_04701840.1| hypothetical protein SalbJ_07765 [Streptomyces albus J1074]
          Length = 263

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 65/200 (32%), Gaps = 20/200 (10%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           +     A+GT+  V    +  + + + R   ++++            +   +   + +  
Sbjct: 46  NTPAAFALGTNKAVAIVGTTGASVTYARRAPVDVRTAVRIGLAALAGSTGGAFFAAGMST 105

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK-------YIWGMVTGFLSGALGVG 176
             L     +  L +   ++ +         P    +        + G+  GF  G +G G
Sbjct: 106 EVLKPVIMVVLLAVAAFVILKPAFGTTAPPPGPVSRRRTLAAIGLAGLGIGFYDGLIGPG 165

Query: 177 GGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
            G F  L +      ++  A+AT+  V+      AL +  + G             V   
Sbjct: 166 TGTFLVLALTAVLHLNLVTASATAKIVNCCTNAGALAMFAWQGT------------VFWQ 213

Query: 236 AVLIILPISILITPLATKLS 255
             +++   ++    L  + +
Sbjct: 214 LAVVMAVFNLAGATLGARTA 233


>gi|167006011|ref|ZP_02271769.1| hypothetical protein Cjejjejuni_07710 [Campylobacter jejuni subsp.
           jejuni 81-176]
          Length = 228

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 73/200 (36%), Gaps = 16/200 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y  ++   +  +G +  + G GGGL+ +P L            I  H+++ T+       
Sbjct: 10  YYFILFFVALFAGFIDSIVG-GGGLITLPALIAC--------GIPAHLSLATNKLQSVFG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + + + +  T  +  L   +F   +   + S  +  V    L     IF  L  +  
Sbjct: 61  SFTATLTYFKSTT--LPHLAWGVFFTALGAAIGSYSVLFVKDEQLKLIILIFLTLTFLYT 118

Query: 142 LKRDRLYCERKFPD----NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
             R  L      P          I G+  GF  G LG G G F     +   G ++ KA+
Sbjct: 119 ALRPNLGKHESEPKIKNIKIFHLICGLTLGFYDGFLGPGTGSFWIFACVMLLGFNMRKAS 178

Query: 197 ATSAGVSALIAFPALLVRIY 216
             +  ++      AL + ++
Sbjct: 179 INTKILNFTSNIIALAIFLW 198


>gi|268604291|ref|ZP_06138458.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Neisseria
           gonorrhoeae PID1]
 gi|268588422|gb|EEZ53098.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Neisseria
           gonorrhoeae PID1]
          Length = 260

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 61/189 (32%), Gaps = 21/189 (11%)

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD 155
           + K             VV +L +S V K  L     +  + + +  +   +L   ++   
Sbjct: 69  DWKKGLPIAAASFAGGVVGALSVSLVSKDILLAVVPVLLIFVALYFVFSPKLDGSKEGKA 128

Query: 156 NYVKYIWGM----VTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPA 210
               +++G+    + GF  G  G G G  F    ++  G  +  A + +   +      +
Sbjct: 129 RMSFFLFGLTVAPLLGFYDGVFGPGVGSFFLIAFIVLLGCKLLNAMSYTKLANVACNLGS 188

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           L V +  G             +    V  +   + +   L  + +   G K +      +
Sbjct: 189 LSVFLLHGS------------IIFPIVATMAVGAFVGANLGARFAVRFGSKLIKP----L 232

Query: 271 MFTTSFVFA 279
           +   S   A
Sbjct: 233 LIVISISMA 241


>gi|218681756|ref|ZP_03529531.1| hypothetical protein RetlC8_23708 [Rhizobium etli CIAT 894]
          Length = 191

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 13/139 (9%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   I +I+      G LSG+FGVGGG ++ P+L           +I   V
Sbjct: 1   MTIYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFY--------NIPPVV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    +  +S+   + H R GT+++K+    +        V   + S +        
Sbjct: 53  AVATGANQVVASSISGAITHFRRGTLDVKLGTVLLIGGLSGATVGIWIFSLLRAIGQLDL 112

Query: 125 FLNKAFAIFCLLMGILMLK 143
            ++  + IF   +G LML 
Sbjct: 113 IISLMYVIFLGTVGGLMLL 131



 Score = 42.4 bits (99), Expect = 0.082,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 24/57 (42%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
           ++    G   GFLSG  GVGGG     L++FY      A AT A      +    + 
Sbjct: 15  FIILGMGAAVGFLSGMFGVGGGFLITPLLIFYNIPPVVAVATGANQVVASSISGAIT 71


>gi|83859549|ref|ZP_00953069.1| membrane protein [Oceanicaulis alexandrii HTCC2633]
 gi|83851908|gb|EAP89762.1| membrane protein [Oceanicaulis alexandrii HTCC2633]
          Length = 308

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 87/269 (32%), Gaps = 56/269 (20%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L       GI  +    VA+ +    I  +SV   + H R  T+++K+    +   
Sbjct: 39  MTPILIFL----GIPPA----VAVSSQANQIVASSVSGALAHFRRKTLDVKMGLILLIGG 90

Query: 108 PITTVVTSLMISHVD-----KSFLNKAFAIFCLLMGILML-------------------K 143
            + ++    +   +         ++  +  F  ++G LML                   K
Sbjct: 91  VVGSISGVQLFGLLQRLGQIDLVISLCYVGFLGVIGGLMLVESVNAIRRRRGASGPVRPK 150

Query: 144 RDRLYCERKFP------------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGA 190
           R +       P                    G + G L+  +GVGGG      M++    
Sbjct: 151 RRKRGLIDALPFKTRFAVSGLYMSVIPPIAIGFLVGGLAALMGVGGGFVMVPAMIYLLRM 210

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
                  TS      +A  AL   + +              V++    I++  S++   +
Sbjct: 211 PTNVVIGTSLFQILFVA--ALTSFLQAVQNQT---------VDMVLAGILILGSVVGAQI 259

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             + +  I  + L    ++I+ +     A
Sbjct: 260 GARFTSKIPAEELRALLALIVVSVCLKLA 288


>gi|326772241|ref|ZP_08231526.1| integral membrane protein [Actinomyces viscosus C505]
 gi|326638374|gb|EGE39275.1| integral membrane protein [Actinomyces viscosus C505]
          Length = 261

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 90/248 (36%), Gaps = 32/248 (12%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP L               H A   SL V+  T+++S +   R G ++ +    +  
Sbjct: 26  ILSVPALIYLL-------GQDPHDASAGSLVVVGLTAIVSLIAPARAGRVHWRDGATFGL 78

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR-------------DRLYCERK 152
           +  +  +V S     VD + L   F +   ++G++ML R                    +
Sbjct: 79  MSVLGALVGSRASVAVDGTVLLTLFCVMLAVVGVVMLLRGLRSRPGADDGEGSGTGGASE 138

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
                V       TGFL+G  GVGGG     +++   G  + +A+ TS  V  + +   L
Sbjct: 139 RRGLLVVAAAATFTGFLTGFFGVGGGFIVVPMLVLALGFPMKEASGTSLLVMIVASSAGL 198

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
             R+ +              V+   VL     S++   L   L+       LT  F +++
Sbjct: 199 AARVGTHSN-----------VDWPVVLTFAAASMVGGLLGGPLTKRASASTLTTAFGILL 247

Query: 272 FTTSFVFA 279
                V A
Sbjct: 248 LGVCTVTA 255


>gi|15611281|ref|NP_222932.1| hypothetical protein jhp0211 [Helicobacter pylori J99]
 gi|4154732|gb|AAD05794.1| putative [Helicobacter pylori J99]
          Length = 277

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 74/215 (34%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G +++K          +  ++ S ++  ++   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLKEGSFAALGGLMGAILGSFILKVINDKILMSVFVVVVCYTFIKYAFS 119

Query: 145 DRLYCE-------------------RKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
                E                   R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 SNKKPEHFEEMHFDLHANNKTPEKKRAIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|119900276|ref|YP_935489.1| hypothetical protein azo3987 [Azoarcus sp. BH72]
 gi|119672689|emb|CAL96603.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
          Length = 254

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 10/177 (5%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +P L  AF       +       GT+       +  + +++ R   I  ++   
Sbjct: 26  GGGLIQIPALFAAF------PNALPATLFGTNKLASIVGTTSAAVQYARRVVIPWRVAGP 79

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD---RLYCERKFPDNYVK 159
                 I +   +  ++++  + L     +  +++      +    ++  ER+     + 
Sbjct: 80  GAAAALIGSWYGAKAVAYLPPAMLRPLVLVLLVVVATYTFAKKELGQVAREREHRVVPLA 139

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRI 215
            + G   GF  G  G G G F   L +   G    +A+ T+  V+      A+    
Sbjct: 140 VLIGGGIGFYDGFFGPGTGSFLIFLFIRVLGMDFLRASMTAKIVNVATNLAAITFFA 196


>gi|87309400|ref|ZP_01091536.1| hypothetical protein DSM3645_22394 [Blastopirellula marina DSM
           3645]
 gi|87288039|gb|EAQ79937.1| hypothetical protein DSM3645_22394 [Blastopirellula marina DSM
           3645]
          Length = 269

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 87/247 (35%), Gaps = 34/247 (13%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
             A  L+     + M  A+G SL  +  T+++ F+     G + ++    +     +   
Sbjct: 25  IFAVPLLVYGLGVSMRDAVGVSLAAVGATALIGFITRWLQGDVEVRTGLLFAVAGMLGAP 84

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER--------------------- 151
           + +L+   + ++ L   FA   L++   + ++                            
Sbjct: 85  LGTLLAGKMSEAVLLSLFAALMLIVAARLWRKSGTPQVACETNQDASQPTCQRDEGGALV 144

Query: 152 -KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFP 209
                  +  I G++TG L+G  GVGGG      ++F+    I+KA   S  V A+I+  
Sbjct: 145 LNSRCAILLSIVGVLTGALAGMFGVGGGFVIVPALVFFTNMPIHKAVGASLMVIAVISVS 204

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            +   + +G  +  +             ++ +   +    +   +   +    L  GF+ 
Sbjct: 205 GVASHLIAGRTIEPML-----------TILFIAGGVAGLFVGQAIGRRLSGPALQKGFAA 253

Query: 270 IMFTTSF 276
            +   + 
Sbjct: 254 AIVAVAM 260



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 8/122 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ +   L+G L+G+FGVGGG V+VP L           ++ +H A+G SL VIA  SV
Sbjct: 151 ILLSIVGVLTGALAGMFGVGGGFVIVPALVFF-------TNMPIHKAVGASLMVIAVISV 203

Query: 84  MSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                H   G TI   +   +I        V   +   +    L K FA   + + + ++
Sbjct: 204 SGVASHLIAGRTIEPMLTILFIAGGVAGLFVGQAIGRRLSGPALQKGFAAAIVAVAMFVI 263

Query: 143 KR 144
            +
Sbjct: 264 VK 265


>gi|313144262|ref|ZP_07806455.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313129293|gb|EFR46910.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 225

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 80/222 (36%), Gaps = 23/222 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ +P L  A    GI        A+GT+       S  + +   + G I++K    ++ 
Sbjct: 1   MITIPALLFA----GIPPLQ----ALGTNKFQSCFGSFGASLHFYKRGHIDLKGSVGFVC 52

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY--CERKFPDNYVKYIWG 163
           V+ +++++ S+ +   +  FL K      ++     L   ++     +    +       
Sbjct: 53  VVFLSSILGSVCVGLFESDFLRKCIPFLLIIFAFYFLFSPKITQDSSKAILGSAGLGFVL 112

Query: 164 MVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
            + GF  G  G G G  F   L+   G S+ +A A +   +      ++LV  +      
Sbjct: 113 GIIGFYDGFFGPGTGSFFMLSLITLGGFSLLQALANAKLFNFATNLASMLVFAFG----- 167

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
                  G +     L +         L ++++   G K + 
Sbjct: 168 -------GHILWIVGLCMALGQFAGASLGSRIAIGYGVKIIK 202


>gi|167719328|ref|ZP_02402564.1| hypothetical protein BpseD_09902 [Burkholderia pseudomallei DM98]
 gi|167738326|ref|ZP_02411100.1| hypothetical protein Bpse14_09675 [Burkholderia pseudomallei 14]
 gi|167815514|ref|ZP_02447194.1| hypothetical protein Bpse9_10234 [Burkholderia pseudomallei 91]
 gi|167823925|ref|ZP_02455396.1| hypothetical protein Bpseu9_09610 [Burkholderia pseudomallei 9]
 gi|167845461|ref|ZP_02470969.1| hypothetical protein BpseB_09243 [Burkholderia pseudomallei B7210]
 gi|167894005|ref|ZP_02481407.1| hypothetical protein Bpse7_09621 [Burkholderia pseudomallei 7894]
 gi|167902451|ref|ZP_02489656.1| hypothetical protein BpseN_09292 [Burkholderia pseudomallei NCTC
           13177]
 gi|167910693|ref|ZP_02497784.1| hypothetical protein Bpse112_09370 [Burkholderia pseudomallei 112]
 gi|226197371|ref|ZP_03792948.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9]
 gi|254297474|ref|ZP_04964927.1| putative membrane protein [Burkholderia pseudomallei 406e]
 gi|157807340|gb|EDO84510.1| putative membrane protein [Burkholderia pseudomallei 406e]
 gi|225930750|gb|EEH26760.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9]
          Length = 262

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 95/267 (35%), Gaps = 40/267 (14%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             + G + GL G GGG++ VP L        +     M  A   +L  +A ++ +  +E 
Sbjct: 2   GSIVGAVLGLTGAGGGILAVPALV-------VGMGWPMQQATPVALVAVAGSAALGALEG 54

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK------ 143
            R G +  +            T +   +   + +  L   FA+  L++ + +L+      
Sbjct: 55  FRRGLVRYRAAFLMAAAGVPLTTLGVRVAHRLPQRVLLALFALVMLVVAVRLLRQALRHA 114

Query: 144 ---------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
                           D       +P        G +TG ++G LGVGGG     ++  +
Sbjct: 115 AGEPACSPLCVGRVNPDTGRLVWSWPAGIALASTGALTGLMTGLLGVGGGFVIVPMLRKF 174

Query: 189 -GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
              +++   ATS  V AL+    ++  I SG               +   L     + L 
Sbjct: 175 TNVTMHGIVATSLMVIALVGTGGVIATIASGTPAP-----------LDVTLWFTATTALG 223

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTT 274
                 +S  +  +++ +GF+  +   
Sbjct: 224 MAAGRWVSRYLSARHVQLGFAAALVCV 250



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 47/117 (40%), Gaps = 13/117 (11%)

Query: 162 WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G + G + G  G GGGI     L++  G  + +A          +A  A+      G  
Sbjct: 1   MGSIVGAVLGLTGAGGGILAVPALVVGMGWPMQQA--------TPVALVAVAGSAALG-- 50

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              L  +  G V   A  ++    + +T L  ++++ + ++ L   F+++M   +  
Sbjct: 51  --ALEGFRRGLVRYRAAFLMAAAGVPLTTLGVRVAHRLPQRVLLALFALVMLVVAVR 105


>gi|294085746|ref|YP_003552506.1| putative permease [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292665321|gb|ADE40422.1| Predicted permease [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 304

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 55/266 (20%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L       G+       VA+ T    I  +SV   + H R   ++ K+    +   
Sbjct: 39  MTPLLIF----FGVPPV----VAVATEANQIVASSVSGVLAHMRRSNVDFKMGTILLVGG 90

Query: 108 PITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGILML-------------------- 142
            I + +   + + + +       +  ++ +   ++G LML                    
Sbjct: 91  VIGSTLGVFLFAFLRELGQIDLVIKLSYVVLLGIVGSLMLVESVRAILRTRQPGAARGKL 150

Query: 143 ----------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGAS 191
                      + R    + +    +    G   G L+  +GVGGG      M++  G  
Sbjct: 151 HQHNWLHGLPFKMRFRRSKLYISALLPLGIGAFVGVLAAIMGVGGGFIMVPAMIYILGMP 210

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
                 TS           L   I+    +  L       V+     ++L  +++     
Sbjct: 211 TAVVVGTS-----------LFQIIFVTANVTVLQSVQTQTVDFVLAGLLLFGAVIGAQFG 259

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
           T+    +  + L    ++++      
Sbjct: 260 TRAGAKLRGEQLRGLLALMVIAVCIK 285



 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 8/128 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-TS 82
            L +      G L+ + GVGGG +MVP +            +   V +GTSL  I   T+
Sbjct: 175 LLPLGIGAFVGVLAAIMGVGGGFIMVPAMIYIL-------GMPTAVVVGTSLFQIIFVTA 227

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++ ++  +  T++  +    +F   I     +   + +    L    A+  + + I + 
Sbjct: 228 NVTVLQSVQTQTVDFVLAGLLLFGAVIGAQFGTRAGAKLRGEQLRGLLALMVIAVCIKLG 287

Query: 143 KRDRLYCE 150
               L   
Sbjct: 288 FDLALQPA 295


>gi|295102134|emb|CBK99679.1| Predicted permeases [Faecalibacterium prausnitzii L2-6]
          Length = 256

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 73/213 (34%), Gaps = 16/213 (7%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +     +  +  ++  +  +G +    G GGGL+ +P    A         +  H    T
Sbjct: 1   MGIQISLPMMAFLVFMTGFAGFVDSAAG-GGGLISLPAYLFA--------GLPPHYTYAT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +    A  +  +     ++G +N+K+           + + + ++  +    L     I 
Sbjct: 52  NKFSAACGTTFATASFFKNGAMNLKVGILAAIGSFAGSALGAHIVLMLSDEVLQMMMFII 111

Query: 134 CLLMGILMLKRDRLYCERK------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LML 186
             +  +++L R  L  E +           +    G+  G   G +G G G F  +    
Sbjct: 112 LPIAAVIILWRRNLPDENRDDGTLNLKKTLLALGIGLGIGLYDGMVGPGTGTFAIIAFTS 171

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
             G  +  A   +  ++    + +L   + SG 
Sbjct: 172 LMGFDLRTANGNAKVLNLASNYASLFTYLSSGL 204


>gi|37523559|ref|NP_926936.1| hypothetical protein glr3990 [Gloeobacter violaceus PCC 7421]
 gi|35214563|dbj|BAC91931.1| glr3990 [Gloeobacter violaceus PCC 7421]
          Length = 299

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 95/259 (36%), Gaps = 45/259 (17%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +V+VP+L+  F        + +H A+G SL  +A TS  +   + + G  N++I      
Sbjct: 46  VVIVPLLTLVF-------GVDIHYAIGASLVSVAATSSAAAAVYLKQGFANIRIALVLEL 98

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF------------ 153
              +  V  +++   +  + +   F +  LL   L  +  +   E +             
Sbjct: 99  ATTLGAVGGAVLALQLPTAAIAVLFGLALLLSAYLSARPPQPRSETRAQDKLAGVLELEG 158

Query: 154 -------PDNYVKYIWG------MVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATS 199
                  P +Y     G       V G LSG LG+G G    L M    G     +TATS
Sbjct: 159 EYPDTAGPQSYRVRSVGLGFGLMGVAGMLSGLLGIGSGALKVLAMDQVMGVPFKVSTATS 218

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +  + A  +  V +  G+   GL         +  +L +L  S+L      ++     
Sbjct: 219 NFMIGVTAAASAGVYLSRGYIDPGLT--------MPVMLGVLVGSLL----GARVFIAAK 266

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            K L   F+ ++   +   
Sbjct: 267 PKLLRPVFAGVIALLAVQM 285



 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 46/111 (41%), Gaps = 7/111 (6%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           ++G LSGL G+G G + V  + +          +   V+  TS  +I  T+  S   +  
Sbjct: 183 VAGMLSGLLGIGSGALKVLAMDQVM-------GVPFKVSTATSNFMIGVTAAASAGVYLS 235

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            G I+  +    +  + + +++ + +        L   FA    L+ + M+
Sbjct: 236 RGYIDPGLTMPVMLGVLVGSLLGARVFIAAKPKLLRPVFAGVIALLAVQMI 286


>gi|291451192|ref|ZP_06590582.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291354141|gb|EFE81043.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 261

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 65/200 (32%), Gaps = 20/200 (10%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           +     A+GT+  V    +  + + + R   ++++            +   +   + +  
Sbjct: 44  NTPAAFALGTNKAVAIVGTTGASVTYARRAPVDVRTAVRIGLAALAGSTGGAFFAAGMST 103

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK-------YIWGMVTGFLSGALGVG 176
             L     +  L +   ++ +         P    +        + G+  GF  G +G G
Sbjct: 104 EVLKPVIMVVLLAVAAFVILKPAFGTTAPPPGPVSRRRTLAAIGLAGLGIGFYDGLIGPG 163

Query: 177 GGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
            G F  L +      ++  A+AT+  V+      AL +  + G             V   
Sbjct: 164 TGTFLVLALTAVLHLNLVTASATAKIVNCCTNAGALAMFAWQGT------------VFWQ 211

Query: 236 AVLIILPISILITPLATKLS 255
             +++   ++    L  + +
Sbjct: 212 LAVVMAVFNLAGATLGARTA 231


>gi|154507545|ref|ZP_02043187.1| hypothetical protein ACTODO_00024 [Actinomyces odontolyticus ATCC
           17982]
 gi|153799334|gb|EDN81754.1| hypothetical protein ACTODO_00024 [Actinomyces odontolyticus ATCC
           17982]
          Length = 266

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 98/264 (37%), Gaps = 23/264 (8%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           S+   ++ I L+I     +G LSGLFGVGGGLV+VP L            +    A  TS
Sbjct: 6   SQPLTMNRILLVIATGVGAGFLSGLFGVGGGLVIVPALMGVL-------GMDQRRASATS 58

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA---FA 131
           L  I  T+ +    +  HG ++       +      + V   ++  +    L      F 
Sbjct: 59  LAAIIVTAAVGSGNYALHGEVSWAGAALLVVGALAGSQVGVSLLRRLPTPSLPWILIGFT 118

Query: 132 IFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGA 190
           +F ++   L +               +  + G+  G LSG +GVGGG      M L  GA
Sbjct: 119 VFVIVSQYLHVPTREGSVSLTPASCALMILVGLCAGILSGLVGVGGGSVIVPGMELAVGA 178

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
               A  TS  V         +  +  G             V++   LI+   +    P+
Sbjct: 179 GDLIARGTSLLVMIPTGIAGTVTNLRHGM------------VDLRVGLIVGASAAATAPV 226

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTT 274
              ++ ++      I F++ + + 
Sbjct: 227 GRLVATLVSPSVGAILFNIFLLSI 250



 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 7/129 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+I+    +G LSGL GVGGG V+VP +  A     +       +A GTSL V+ PT +
Sbjct: 144 ALMILVGLCAGILSGLVGVGGGSVIVPGMELAVGAGDL-------IARGTSLLVMIPTGI 196

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + + RHG +++++          T  V  L+ + V  S     F IF L +    + 
Sbjct: 197 AGTVTNLRHGMVDLRVGLIVGASAAATAPVGRLVATLVSPSVGAILFNIFLLSIIASTIL 256

Query: 144 RDRLYCERK 152
           + R     +
Sbjct: 257 KMRKKARAQ 265


>gi|78042660|ref|YP_361477.1| hypothetical protein CHY_2692 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77994775|gb|ABB13674.1| putative membrane protein [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 248

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 96/262 (36%), Gaps = 30/262 (11%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A F++G   GL GVGGG ++          + +   +     +G  L   + T  M+
Sbjct: 4   FILAGFITGLSIGLTGVGGGSIL--------APLLLLLGVAPGQVVGNDLVFASITKGMA 55

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-----DKSFLNKAFAIFCLLMGIL 140
              +++   IN    K  ++      +   L++ H+       + L    A F + + I+
Sbjct: 56  LYPYKKENKINFSTAKKLLYGSIPGGITGVLILEHLKKTAGSSALLTHVLAGFIIAVSII 115

Query: 141 MLKRDRLYCERKFPDNY----VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKA 195
            L ++ L  +              + G VTG + G   +G GI   L +   G     + 
Sbjct: 116 SLLKEFLNFKGSLLSLPQEDLGIILTGFVTGIIVGLTSIGAGILVGLYLYMTGKFDSREL 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             T      ++A             + G   +  G +N   ++ ++  SI    L  KL+
Sbjct: 176 VGTDIFHGLILAL------------VLGFLHFKFGNLNPKILIYLILGSIPGALLGGKLN 223

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
           + +  K + + F  +    S  
Sbjct: 224 FYLSPKVVRVIFLSLTTALSLK 245


>gi|71394058|gb|AAZ32097.1| predicted permease [uncultured euryarchaeote Alv-FOS5]
          Length = 119

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 8/123 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-T 81
           + L ++    +G +SGL G+GGG+++VP L   F        +  H A GTSL ++ P  
Sbjct: 4   VILYLLIGLTAGVVSGLIGIGGGVIIVPSLIFLF-------GMTQHQAQGTSLAMLLPPI 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             ++   + + G IN  I             + +   + +    L K F +  L + + M
Sbjct: 57  GALAVWNYWKAGYINWTIALIAATGFFFGGYIGANFANSISNQLLRKIFGVALLAIAVYM 116

Query: 142 LKR 144
           + +
Sbjct: 117 IVK 119


>gi|317061091|ref|ZP_07925576.1| membrane protein [Fusobacterium sp. D12]
 gi|313686767|gb|EFS23602.1| membrane protein [Fusobacterium sp. D12]
          Length = 253

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 97/253 (38%), Gaps = 27/253 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +   L+ +  FL+  +  + G GGG++ +P     F  +G+      H+A+GT+    A 
Sbjct: 4   ESFLLLSILCFLAAFIDSIAG-GGGMISLPA----FMAVGLPP----HIALGTNKVSAAI 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            ++ S +   R   I + ++  +  +  I  +        +  ++         + + I 
Sbjct: 55  GTLASSLNFLRSNKIIIPLVTRFAPLALIGAIFGVKTALLIPPNYFQPISFFLLICVFIY 114

Query: 141 MLKRDRLYCERKFPDNYVKYI-----WGMVTGFLSGALGVGGGIFTNLLML-FYGASIYK 194
            L    L     +   +   I     +  V GF  G LG G G F   +++  +      
Sbjct: 115 SLMNKNLGESYSYSGIHSADIKWGCAFAFVIGFYDGFLGPGTGSFLIFMLIKIFHLDFAH 174

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           ATAT+  ++      +  +  Y+G             +N+   LI+  I I+   + + L
Sbjct: 175 ATATTKFINLASNVISAALYFYAGK------------LNLPLGLIMAVIMIVGAFVGSSL 222

Query: 255 SYMIGKKYLTIGF 267
           +   G K++   F
Sbjct: 223 AIYKGSKFIKPVF 235


>gi|260892431|ref|YP_003238528.1| protein of unknown function DUF81 [Ammonifex degensii KC4]
 gi|260864572|gb|ACX51678.1| protein of unknown function DUF81 [Ammonifex degensii KC4]
          Length = 301

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 65/302 (21%), Positives = 114/302 (37%), Gaps = 52/302 (17%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + +FL    +      ++    + G LSGLFGVGGG ++ PVL       G+  +    V
Sbjct: 1   MHIFLPIANMDLPFLAVLGLGGVVGFLSGLFGVGGGFLLTPVLLMV----GVPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A  +    I   SV   + H R+G ++ K+    +    +   + + ++ H+        
Sbjct: 53  ATASDTNQIVAASVSGTVAHARNGNVDFKLGSIILVGGLLGGTIGTDLVRHLRTLGHFDF 112

Query: 125 FLNKAFAIFCLLMGILM-------LKRDRLYCERKFPDNYVKYI---------------- 161
            +  A+ +  L +GI M       L+R     E   P  +V+ +                
Sbjct: 113 VVKIAYVVMLLGVGIFMFQESLRALRRKEQAPETPHPPKWVQALPWRLYFPVSGIECSAL 172

Query: 162 ----WGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIY 216
                G + G L+  +GVGGG     +M++  G    KA  TS       A    L +  
Sbjct: 173 ALLLLGFLIGMLAAIMGVGGGFIMLPVMIYLLGIPTLKAVGTSIFTVVFTAINVTLAQAT 232

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                        G V++   +++L  S +   L  K+S  +  + L I FS+I+     
Sbjct: 233 VN-----------GTVDVVLAVLLLLGSSIGAQLGAKVSRRLAGEQLRIAFSIIVLAVMA 281

Query: 277 VF 278
             
Sbjct: 282 KM 283



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 8/109 (7%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR-HGTI 95
           + + GVGGG +M+PV+            I    A+GTS+  +  T++   +     +GT+
Sbjct: 185 AAIMGVGGGFIMLPVMIYLL-------GIPTLKAVGTSIFTVVFTAINVTLAQATVNGTV 237

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           ++ +    +    I   + + +   +    L  AF+I  L +   ML +
Sbjct: 238 DVVLAVLLLLGSSIGAQLGAKVSRRLAGEQLRIAFSIIVLAVMAKMLYQ 286


>gi|190576130|ref|YP_001973975.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
 gi|190014052|emb|CAQ47692.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
          Length = 253

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 81/242 (33%), Gaps = 24/242 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
               I+    +  + G  G+  GLV     S     MG+  +        +       T+
Sbjct: 7   FWWFILIGLGAQLVDGALGMAFGLVS----SSVMLSMGLPPAQV----SASIHTAEVFTT 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H   G ++ ++         +   + + +++ +    +     ++ L++ I++L
Sbjct: 59  GASGVSHLAAGNVDKRLFLRLALPGAVGGALGAYVLTQIPGDIIRPLIYLYLLVLAIIIL 118

Query: 143 KRDRLYCERKFPDNYVKY--IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
            R      R  P   ++   + G   G L  + G G G      +L  G        T  
Sbjct: 119 AR---AAGRWMPKGEIRRVPVLGFFAGLLDASGGGGWGPIATSTLLARGGQARTTIGTVN 175

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
               ++        +            S+G  ++  V  +L   ++  P+A  L   + +
Sbjct: 176 AAEFVVTLTVSATFLL-----------SMGVQHLQIVAGLLIGGMMAAPVAAILVKRVKE 224

Query: 261 KY 262
           ++
Sbjct: 225 RW 226


>gi|146329063|ref|YP_001209309.1| hypothetical protein DNO_0392 [Dichelobacter nodosus VCS1703A]
 gi|146232533|gb|ABQ13511.1| conserved hypothetical membrane protein [Dichelobacter nodosus
           VCS1703A]
          Length = 258

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 81/203 (39%), Gaps = 12/203 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+   +  +G +  + G GGG++ +P L           S+   +A+ T+    +
Sbjct: 6   LHIVLLLFGVALTAGFVDTIAG-GGGMLTIPALLL-------TPSLSPEMALATNKLQSS 57

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG- 138
             S  +     R G I+ K +   +F   +   V  ++I  +D   L K   +  + +  
Sbjct: 58  CGSTSAAFCFWRKGYIHFKPMLGGMFTTAVGAAVGVILIHIIDSGILAKVLPLLLITVAG 117

Query: 139 --ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKA 195
             I M     +    K           +  GF  G LG G G F  L ++ F G ++ +A
Sbjct: 118 IFIAMPTLGDVDHAAKLGFWGFALGLTLPIGFYDGFLGPGSGSFYILALIAFRGETLRQA 177

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
           T  +   +A+    AL V I +G
Sbjct: 178 TMEAKVFNAMSNLTALTVFIIAG 200


>gi|71736263|ref|YP_275786.1| hypothetical protein PSPPH_3644 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|289649414|ref|ZP_06480757.1| hypothetical protein Psyrpa2_16968 [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|71556816|gb|AAZ36027.1| membrane protein, putative [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|320327526|gb|EFW83538.1| hypothetical protein PsgRace4_23908 [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 248

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 89/229 (38%), Gaps = 16/229 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++     I    I   +T
Sbjct: 29  AIPALGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALMLIVPSFIFAWLT 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSG 171
           SL+   VD   +   F  F +++ +  + +      +           ++ G+ +G   G
Sbjct: 89  SLLAVRVDPQSMRLGFVGFLVVLTVFNVAQMYWRGHQAGSGLRHEKWLWLLGVGSGMTGG 148

Query: 172 ALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
             GVGGG+    ++   +G +   A   +  ++A              + L+    WS+G
Sbjct: 149 LFGVGGGVVATPILTSVFGTTQVVAQGLALSLAAP-----STGITLVTYALHDHVNWSMG 203

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                  + +    +       KL++ + ++ L + F + +   + + A
Sbjct: 204 -------IPLAIGGLASISWGVKLAHSLPERTLRLMFCVFLVLCAVILA 245


>gi|159897697|ref|YP_001543944.1| hypothetical protein Haur_1168 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159890736|gb|ABX03816.1| protein of unknown function DUF81 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 254

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 78/203 (38%), Gaps = 15/203 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++   + L+G +  + G GGGL+ +P L            I     +GT+       +
Sbjct: 3   LLMLCGFALLAGFIDAVAG-GGGLIQLPPLLIT------QKDIAPAFILGTNKFAAVTGT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + + + R   +N +I+   +F   I + + +  +S +          +  + M I   
Sbjct: 56  ATAAVSYNRRVKVNWQIVVPGMFSAAICSWLGARAVSLIRPELFRPIMLVLIIAMAIYTF 115

Query: 143 KRD------RLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
           KR       R       P  YV +  G + GF  G  G G G +     +   G    +A
Sbjct: 116 KRKDFGSAARETKASTKPIPYVLFFCG-LIGFYDGIFGPGTGSLLMFAFVGILGFDFLQA 174

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
           +AT+  ++      AL+  + +G
Sbjct: 175 SATTKIINVTTNVAALVQFLGAG 197


>gi|146300674|ref|YP_001195265.1| hypothetical protein Fjoh_2925 [Flavobacterium johnsoniae UW101]
 gi|146155092|gb|ABQ05946.1| protein of unknown function DUF81 [Flavobacterium johnsoniae UW101]
          Length = 255

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 93/264 (35%), Gaps = 25/264 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  + +A+F +G +  + G GGGL+  P+            ++ +   +GT        
Sbjct: 5   IILFLCLAAFAAGFVDAIVG-GGGLIQTPMGLILL------PNLPVSTVIGTLKIPAFSG 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN-----KAFAIFCLL 136
           +  +  ++ +   I  K+L   +F+   +  + S +++ V   F+          +F   
Sbjct: 58  TAFAAFQYLKKVIIQWKLLLIMMFLAVPSAFLGSTILTLVSNDFMKPLLLVVLSLLFIYT 117

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
                  +       +           ++ GF  G +G G G  F    +   G     A
Sbjct: 118 YAKKNFGQHAAKDHSQTTQIIYAVFISIIVGFYDGFIGPGTGSFFVVAFIALLGFDFLHA 177

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +A +  V+    F ++ + +  G             +     + +   + L   L  KL+
Sbjct: 178 SANAKMVNLATNFGSICLFMIKGK------------IIWTIAIPMAISNGLGGWLGAKLA 225

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
              G  ++ I F +++  T   FA
Sbjct: 226 INKGNGFIRIFFLVVVVGTLIRFA 249


>gi|88809765|ref|ZP_01125272.1| hypothetical protein WH7805_01135 [Synechococcus sp. WH 7805]
 gi|88786515|gb|EAR17675.1| hypothetical protein WH7805_01135 [Synechococcus sp. WH 7805]
          Length = 268

 Score = 53.9 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 7/114 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++V     G L+G+ GVGGG  +VP L    +L        M  A GTSL VI+ +S+M+
Sbjct: 135 LLVQGLGVGLLTGIAGVGGGFAIVPALVLLARL-------PMTQASGTSLLVISASSLMA 187

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            + H      ++ +L   +    I  ++    +S V +  L + FA   L+  I
Sbjct: 188 LVRHGHWPAASLPLLLPLLLGGGIGILLGQRFVSRVSERRLRQGFAALLLVSAI 241


>gi|313763588|gb|EFS34952.1| integral membrane family protein [Propionibacterium acnes HL013PA1]
 gi|313816768|gb|EFS54482.1| integral membrane family protein [Propionibacterium acnes HL059PA1]
 gi|313829614|gb|EFS67328.1| integral membrane family protein [Propionibacterium acnes HL063PA2]
 gi|314914742|gb|EFS78573.1| integral membrane family protein [Propionibacterium acnes HL005PA4]
 gi|314919296|gb|EFS83127.1| integral membrane family protein [Propionibacterium acnes HL050PA1]
 gi|314920794|gb|EFS84625.1| integral membrane family protein [Propionibacterium acnes HL050PA3]
 gi|314930473|gb|EFS94304.1| integral membrane family protein [Propionibacterium acnes HL067PA1]
 gi|314954369|gb|EFS98775.1| integral membrane family protein [Propionibacterium acnes HL027PA1]
 gi|314957445|gb|EFT01548.1| integral membrane family protein [Propionibacterium acnes HL002PA1]
 gi|314968506|gb|EFT12604.1| integral membrane family protein [Propionibacterium acnes HL037PA1]
 gi|315099216|gb|EFT71192.1| integral membrane family protein [Propionibacterium acnes HL059PA2]
 gi|315100433|gb|EFT72409.1| integral membrane family protein [Propionibacterium acnes HL046PA1]
 gi|315109014|gb|EFT80990.1| integral membrane family protein [Propionibacterium acnes HL030PA2]
 gi|327454967|gb|EGF01622.1| integral membrane family protein [Propionibacterium acnes HL087PA3]
 gi|327457747|gb|EGF04402.1| integral membrane family protein [Propionibacterium acnes HL083PA2]
 gi|328755198|gb|EGF68814.1| integral membrane family protein [Propionibacterium acnes HL087PA1]
 gi|328758322|gb|EGF71938.1| integral membrane family protein [Propionibacterium acnes HL025PA2]
          Length = 241

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 89/240 (37%), Gaps = 21/240 (8%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+M+P L     L+G+     +   +GT+       ++ + + + R    + ++   
Sbjct: 11  GGGLIMLPSL-----LVGLPTETPVATIVGTNKVAQVVGNLTAGVGYLRKQRPDWRMFLW 65

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD---NYVK 159
              +  +  V+ + +++++ ++       +  +++GI   +R  L             + 
Sbjct: 66  TAVLAGLGAVLGARIVTYMSRAVYTPILLVVLVIIGIYTWRRPSLGAGHNGEGGKHPILV 125

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
            I G+  G   GA+G G G F  L  +   G S  KA+  +   +A+     +       
Sbjct: 126 PIIGLFLGCYDGAIGPGVGTFWVLTYVAVGGYSFLKASGMAKICNAVTNLVTITTLAIH- 184

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                      G V       ++  ++L   +  + +   G  ++   F ++    +   
Sbjct: 185 -----------GHVWWHIAWPLVISNVLGGLIGARAAMKHGNGFVRTMFLIVTSVLAVRM 233


>gi|296132366|ref|YP_003639613.1| protein of unknown function DUF81 [Thermincola sp. JR]
 gi|296030944|gb|ADG81712.1| protein of unknown function DUF81 [Thermincola potens JR]
          Length = 256

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 78/226 (34%), Gaps = 18/226 (7%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
             + I   + MH A+G SL  +  TS  +   + R G  ++++         I  +  +L
Sbjct: 31  PALTIVLGLPMHQAIGISLISVIATSTGAASLYVREGKADIRLGMVLELSTTIGAIAGAL 90

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLK-RDRLYCERKFPDNYVKYIWGMVTGFLSGALGV 175
           + + VD S L   F +  L   + M++ R+           Y +   G+    L+G L  
Sbjct: 91  IANMVDGSTLQILFGLLLLYNAVSMVRHREAAAASVNSAGRYSRLPAGLAASGLAGVLSG 150

Query: 176 GGGIF-----TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
             GI         + +  G  + +A ATS  +  + A  +  +  + G         S  
Sbjct: 151 LLGIGGGLIKIPAMYILMGVPLKRAVATSNFMIGVTASASGFIFFFRGLIDPVTAAPS-- 208

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                          L   L T+ +  I    L   F +I    + 
Sbjct: 209 ----------ALGVFLGARLGTRFNDKISVAGLKKVFVVIFLYLAA 244



 Score = 40.8 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 31/88 (35%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
             M I   + +  A+ TS  +I  T+  S       G I+          + +   + + 
Sbjct: 162 PAMYILMGVPLKRAVATSNFMIGVTASASGFIFFFRGLIDPVTAAPSALGVFLGARLGTR 221

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKR 144
               +  + L K F +  L +   M+ +
Sbjct: 222 FNDKISVAGLKKVFVVIFLYLAADMILK 249


>gi|269123781|ref|YP_003306358.1| hypothetical protein Smon_1016 [Streptobacillus moniliformis DSM
           12112]
 gi|268315107|gb|ACZ01481.1| protein of unknown function DUF81 [Streptobacillus moniliformis DSM
           12112]
          Length = 263

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 106/265 (40%), Gaps = 33/265 (12%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           YI   ++  F +G +  L G+GGG+++ P L           S   ++   +SL V+   
Sbjct: 4   YITYFLIIMFATG-VGSLSGMGGGVIIKPSLDAL------SYSNLDNINFYSSLAVLTM- 55

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA---------- 131
           S++S ++  + G    +I    +  +   +++   +   + K+ L               
Sbjct: 56  SIVSIIKKAKQGD---RIESRELIAIAFGSIIGGKLGIQIFKNSLAYFSGDDIVKLIQIT 112

Query: 132 IFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGA 190
           +  +++ + +          K+ +  + ++  M  G +S  LG+GGG     L +L +G 
Sbjct: 113 VTVIVLSLAIYYNSYCNFTFKYKNYAIYFLVSMCLGIISTFLGIGGGPINVSLFILIFGT 172

Query: 191 SIYKATATSAGVSALIAFP-ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
           S+  AT  S        F    +    +G     L P          +L+I+P +IL   
Sbjct: 173 SMKSATLYSISTIFFSQFSKNFIDFFITGISGYDLYP----------LLVIIPAAILGGN 222

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTT 274
           L TK++ +   + +   +++I    
Sbjct: 223 LGTKINIISSDELIKKAYNIITLFV 247


>gi|255658918|ref|ZP_05404327.1| inner membrane protein YfcA [Mitsuokella multacida DSM 20544]
 gi|260848868|gb|EEX68875.1| inner membrane protein YfcA [Mitsuokella multacida DSM 20544]
          Length = 254

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 75/204 (36%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ +  ++   F++  +  + G GGGL+ +P L       G+         +GT+     
Sbjct: 6   INTLGFLVFFGFMAAFIDSVVG-GGGLIAIPALMW----TGLPPLTV----LGTNKVAAV 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  SF+   R G ++  +++    +  + + V  L +  +   FL     +  +L+ I
Sbjct: 57  MGAFTSFVTFVRSGKVDGWLIRRLFPISLVGSAVGVLAVRQIPSEFLRPLVVVMLILVLI 116

Query: 140 LMLKRDRLYCERKFPDNYVKY-----IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
             + +     E  +     +      +     GF  G  G G G F     L  G     
Sbjct: 117 YSICKKDWGRESTYQGMSTRLLVLSGVVAFTFGFYDGFFGPGTGSFLLFAFLMVGFDFLG 176

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A A +  ++      A ++  Y G
Sbjct: 177 AAANARALNFASNIAAAVLFSYFG 200


>gi|153834487|ref|ZP_01987154.1| inner membrane protein YfcA [Vibrio harveyi HY01]
 gi|148869123|gb|EDL68159.1| inner membrane protein YfcA [Vibrio harveyi HY01]
          Length = 259

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 72/199 (36%), Gaps = 16/199 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  +     R+G +++K ++  I    I + + +  +  +D   L   
Sbjct: 46  ALATNKLQSSFGSFSASWYFVRNGIVSLKEMRLAILCTFIGSAIGAEAVQFIDAGVLTSL 105

Query: 130 FAIFCLLMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
             +  + + +  L          E K  +       G   GF  G  G G G    L  +
Sbjct: 106 IPVLLIAISLYFLLSSTSKAAEGEPKLSEAMFALCVGGGVGFYDGFFGPGTGSIFALCFV 165

Query: 187 FYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
             G  S+  ATA +  ++      ALL  I +      LP W +G       L +     
Sbjct: 166 ALGHFSLVDATARTKILNFTSNIAALLFFILA-----DLPVWEIG-------LTMAVGGF 213

Query: 246 LITPLATKLSYMIGKKYLT 264
           +   L  K+    G+K++ 
Sbjct: 214 IGAQLGAKVVVTKGQKWIR 232


>gi|134096566|ref|YP_001101641.1| hypothetical protein HEAR3419 [Herminiimonas arsenicoxydans]
 gi|133740469|emb|CAL63520.1| Conserved hypothetical proteine, putative permease [Herminiimonas
           arsenicoxydans]
          Length = 254

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 90/257 (35%), Gaps = 25/257 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++   ++  A+F++G +  + G GGGL+ +P L           ++     +GTS     
Sbjct: 1   MEDYVILAAAAFVAGMIDAVVG-GGGLIQLPALFSTL------PNVAPATLLGTSKLAGV 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  + +   R   +               +   +  ++H+   F+ K      + +  
Sbjct: 54  WGTGAAALGFARRVRVQWSTAVPAAVAAFALSFAGAYTVTHIPPDFIRKLLPFILVAVAA 113

Query: 140 LMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIY 193
               +               +     + G   GF  G  G G G     L + F+G    
Sbjct: 114 YTFAKKDFGSIHAPLHIGGKERAWAILVGGGIGFYDGFFGPGTGSFLVFLFVRFFGFDFL 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+A +  V+      ALL   YSG  L     W LG        ++   ++L + +  +
Sbjct: 174 GASAVAKVVNVACNIAALLWFGYSGHLL-----WQLG-------ALMAVCNVLGSLVGIR 221

Query: 254 LSYMIGKKYLTIGFSMI 270
           L+   G  ++   F ++
Sbjct: 222 LALRHGSGFVRKLFLVV 238


>gi|257088950|ref|ZP_05583311.1| predicted protein [Enterococcus faecalis CH188]
 gi|256997762|gb|EEU84282.1| predicted protein [Enterococcus faecalis CH188]
          Length = 259

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 103/264 (39%), Gaps = 26/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  FLS T+  L G+GGG+++ PVL                +A  +S+ V  
Sbjct: 1   MRVLLIYFITIFLSNTVGALSGMGGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFV 54

Query: 80  PTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAI 132
             S+ S  +  ++G  I  K      F   +  ++  L+++        ++      + I
Sbjct: 55  M-SISSTYKQYQNGVQIEWKKAASISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYII 113

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGAS 191
             L + +++L               +  I G+  G LS  LG+GGG      L+LF+G  
Sbjct: 114 MLLTLVLVLLYNQFSNWHLHLNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMD 173

Query: 192 IYKATATSAGVSALIAFPALL-VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           I  AT  S           L  + + +G+ +            +   L I+P ++    +
Sbjct: 174 IKSATVYSIITIFFSQLAKLGNIGLTTGFAVFD----------LTMFLAIIPAALFGGYV 223

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTT 274
               S  + ++ +   +S+++F  
Sbjct: 224 GGLFSKKLSQQRVAQIYSLVVFLV 247


>gi|119952802|ref|YP_950336.1| putative integral membrane protein [Arthrobacter aurescens TC1]
 gi|119951932|gb|ABM10841.1| putative integral membrane protein [Arthrobacter aurescens TC1]
          Length = 275

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 89/240 (37%), Gaps = 30/240 (12%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP L            + +  A+ +SL V+  +S ++ +   R G +N  +      
Sbjct: 46  ILAVPALVY-------GVGMPLTAAIPSSLLVVGASSAVALLPRLRQG-LNWTLALIIGA 97

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN--------- 156
              IT    +L+   +D+  L   FA   +L GI M    +      +            
Sbjct: 98  TGGITAYAGTLVNRMLDQRTLLVVFAAIMILAGIRMFMPTKSSTGSCYNAGRSVRWRRCL 157

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRI 215
                 G+V GFL+G LGVGGG      +    G  +  A  TS  +  + +    +  +
Sbjct: 158 PKALATGVVVGFLTGLLGVGGGFLIVPALTLVLGLPMALAVGTSLAIIVINSMGGFISHL 217

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
               G           V+    ++    ++  + LA +L   +  K L  GF++++   +
Sbjct: 218 ----GNID--------VDWKNTVVFTVTAMAASLLAGRLGRSLPDKALKHGFAILVMLVA 265



 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 40/95 (42%), Gaps = 7/95 (7%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VP L+           + M +A+GTSL +I   S+  F+ H  +  ++ K    +    
Sbjct: 182 IVPALTLVL-------GLPMALAVGTSLAIIVINSMGGFISHLGNIDVDWKNTVVFTVTA 234

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              +++   +   +    L   FAI  +L+   ++
Sbjct: 235 MAASLLAGRLGRSLPDKALKHGFAILVMLVAGYVI 269


>gi|319654712|ref|ZP_08008791.1| hypothetical protein HMPREF1013_05413 [Bacillus sp. 2_A_57_CT2]
 gi|317393628|gb|EFV74387.1| hypothetical protein HMPREF1013_05413 [Bacillus sp. 2_A_57_CT2]
          Length = 293

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 56/264 (21%), Positives = 85/264 (32%), Gaps = 35/264 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I    L   LSG FGVGGG ++ P L           +  +  ++GTSL        
Sbjct: 4   LLFITLGALISVLSGFFGVGGGFILTPTLMLFGFSPVEAITTSLLFSIGTSL-------- 55

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-----DKSFLNKAFAIFCLLMG 138
                H R   I +K            T      +  +     D   +   + I      
Sbjct: 56  SGIFAHIRMKNIWLKQGLILGLSGMAATQAAHPFVLFLEEKGWDAWAVPLFYIILLSYFA 115

Query: 139 ILMLKRDRLYC-----ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASI 192
           + MLKR +            P      + G   GF+S  LGVGGG     L + + G   
Sbjct: 116 LGMLKRGKKSANAAPSSEHSPSIVKMVLIGFFAGFVSTTLGVGGGFIMVPLSVAYLGMMP 175

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS--ILITPL 250
            KA  TS     LI     L    +              V+I   + I  ++  ++ +  
Sbjct: 176 KKAVGTSLFAIMLIVSAGFLSYAST--------------VSIDYWIGISLVTGGLIGSQF 221

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTT 274
             KL+     + +T     +   T
Sbjct: 222 GAKLTSYFENEEITYMLGALYMAT 245



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 7/122 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  +++  F +G +S   GVGGG +MVP+      +M          A+GTSL  I    
Sbjct: 138 IVKMVLIGFFAGFVSTTLGVGGGFIMVPLSVAYLGMMP-------KKAVGTSLFAIMLIV 190

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              F+ +    +I+  I    +    I +   + + S+ +   +        +     ++
Sbjct: 191 SAGFLSYASTVSIDYWIGISLVTGGLIGSQFGAKLTSYFENEEITYMLGALYMATVASVI 250

Query: 143 KR 144
            +
Sbjct: 251 LK 252


>gi|188589382|ref|YP_001922636.1| transporter [Clostridium botulinum E3 str. Alaska E43]
 gi|188499663|gb|ACD52799.1| transporter [Clostridium botulinum E3 str. Alaska E43]
          Length = 249

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 104/263 (39%), Gaps = 23/263 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +I    FL+G +  + G GGG++ +P    A         I +H+A GT+     
Sbjct: 1   MGVLLIICPLVFLAGIIDAVAG-GGGIISLPAYIFA--------GIPIHIAYGTNKFASC 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             + +S ++  R G I +K          I +   + ++  +++ +LN    I   ++ +
Sbjct: 52  IGTSISSIKFFRSGNIKIKSALLSAAGALIGSWFGAQIVLLLNEKYLNYCLIIILPIVSL 111

Query: 140 LMLKRDRLYCERKFPDN-----YVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIY 193
            +L       + K   +      + +I G+  G   G  G G G F  +      G ++ 
Sbjct: 112 FLLFNRNFGVKNKKELSNKKLYILSFIIGLFLGAYDGFFGPGTGTFLVICFTGILGFNLI 171

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A+  +  V+    F AL+  I  G  +     +S+G   + A +  +  + L   LA K
Sbjct: 172 TASGNAKIVNLASNFSALIAYILGGKVM-----FSIG---VPAAVCAIAGNYLGAHLAIK 223

Query: 254 LSYMIGKKYLTIGFSMIMFTTSF 276
               I K  + +   ++     F
Sbjct: 224 NGDKIIKPIIFVAIGLLFIKVIF 246


>gi|56695560|ref|YP_165910.1| hypothetical protein SPO0655 [Ruegeria pomeroyi DSS-3]
 gi|56677297|gb|AAV93963.1| membrane protein, putative [Ruegeria pomeroyi DSS-3]
          Length = 254

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 92/259 (35%), Gaps = 14/259 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D      +  F +       G+G G++   VL       G+   +       +      
Sbjct: 1   MDLFLTFALVGFFAQLADSALGMGFGVISASVLL----AQGVPPPLV----SASVNAAKV 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           PT +++ + H  +G I+  +            +V +L++  + +  L    A + LL+G 
Sbjct: 53  PTGIVAGLSHALNGNIDKALFMRLALSGAAGGLVGALILGELKRPVLTVIIASYLLLIGG 112

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG--GIFTNLLMLFYGASIYKATA 197
           L+L R       +        + G   G +    G+GG  G      ++  G    +A  
Sbjct: 113 LILWRGLSGRAPRLLATGRISVLGATGGLIE---GIGGSWGPVVTSGLIGSGHEPRRAIG 169

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +SA     ++    L  + +G+ L            +  V  ++   +    +  +L+ +
Sbjct: 170 SSALAELAVSLTVFLALM-AGYHLGRWGTGRDLHEVLLPVAGLVAGGVPAALVGGRLAAV 228

Query: 258 IGKKYLTIGFSMIMFTTSF 276
           + ++ LT+   ++      
Sbjct: 229 LPRRPLTVAVGLLAIAIGL 247


>gi|104781379|ref|YP_607877.1| hypothetical protein PSEEN2259 [Pseudomonas entomophila L48]
 gi|95110366|emb|CAK15074.1| conserved hypothetical protein; putative membrane protein
           [Pseudomonas entomophila L48]
          Length = 253

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 89/255 (34%), Gaps = 25/255 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L+ + +F +G +    G GGGL+ +P L          ++    +     L  +  TS
Sbjct: 4   IALLSLFAFAAGLIDAAVG-GGGLIQIPALFNVL-----PNAQPAALLGSNKLASVCGTS 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +     R   ++  ++        + +   +  +S V  S +     +  +LM +   
Sbjct: 58  F-AARSFLRKVKLDWGLIVPAALSAFVMSFFGAATVSLVPASVMRPMVLVLIVLMAVYTF 116

Query: 143 KRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +       K       +  +  + G   GF  G  G G G     L + F+      A+
Sbjct: 117 CKKDFGTLHKPTVIGRKEQCLAVLIGGAIGFYDGLFGPGTGSFLIFLFIRFFALDFLHAS 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A++  V+      AL+  I S            G V     L +   +IL     T L+ 
Sbjct: 177 ASAKLVNIATNLAALVFFIPS------------GNVLWAIALPMAVFNILGALTGTWLAV 224

Query: 257 MIGKKYLTIGFSMIM 271
             G  ++   F +++
Sbjct: 225 RKGAGFVRGLFLILL 239


>gi|15644854|ref|NP_207024.1| hypothetical protein HP0226 [Helicobacter pylori 26695]
 gi|217032839|ref|ZP_03438319.1| hypothetical protein HPB128_176g17 [Helicobacter pylori B128]
 gi|298736832|ref|YP_003729362.1| hypothetical protein HPB8_1341 [Helicobacter pylori B8]
 gi|2313315|gb|AAD07292.1| conserved hypothetical integral membrane protein [Helicobacter
           pylori 26695]
 gi|216945464|gb|EEC24126.1| hypothetical protein HPB128_176g17 [Helicobacter pylori B128]
 gi|298356026|emb|CBI66898.1| conserved hypothetical protein [Helicobacter pylori B8]
          Length = 277

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 74/215 (34%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK- 143
             + + + G ++++          +  ++ S ++  +D   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLREGSFAALGGLMGAILGSFILKIIDDKILMAVFVVVVCYTFIKYAFS 119

Query: 144 ------------------RDRLYCERKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
                                   +R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 SNKKPKHFEEMHFDLHANNKTPEKKRAIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|94311749|ref|YP_584959.1| hypothetical protein Rmet_2817 [Cupriavidus metallidurans CH34]
 gi|93355601|gb|ABF09690.1| putative permease [Cupriavidus metallidurans CH34]
          Length = 257

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 80/247 (32%), Gaps = 36/247 (14%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L+  F   G   +     A+GT L   + T     + HR HG +  ++++      
Sbjct: 27  MTPLLTLLF---GFSPA----TAVGTDLAFASITKGFGTLAHRAHGHVQWQVVRRLCVGS 79

Query: 108 PITTVVTSLM---ISHVDKSFLNKAFAIFCLLMGI---------LMLKRDRLYCERKFPD 155
               V   L+      ++  +L+       + + +          ML         +   
Sbjct: 80  LPAAVAAILVLKSAGELNAQWLHAIRVTIGVSVLLTVLSLLFRKQMLAWLARNPRFQLEG 139

Query: 156 N---YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA--TATSAGVSALIAFPA 210
                   + G V G L     +G G     L+L     +  A    T    +  +   A
Sbjct: 140 RKQVVATVLVGAVIGVLVTVSSIGAGAVGATLILLLYPHMKPAEVAGTDIAYAVPLTAVA 199

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            L  ++            LG V+   +L +L  SI    L  +LS  + ++ +    +  
Sbjct: 200 GLGHVW------------LGTVDWNLLLALLVGSIPGIWLGAQLSRALPERIVRAALATT 247

Query: 271 MFTTSFV 277
           +   +  
Sbjct: 248 LTLVAIK 254



 Score = 39.3 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 45/120 (37%), Gaps = 6/120 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +   ++   + G L  +  +G G V   ++   +  M   +        GT +    P +
Sbjct: 143 VVATVLVGAVIGVLVTVSSIGAGAVGATLILLLYPHMKPAEVA------GTDIAYAVPLT 196

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++ + H   GT++  +L   +        + + +   + +  +  A A    L+ I ++
Sbjct: 197 AVAGLGHVWLGTVDWNLLLALLVGSIPGIWLGAQLSRALPERIVRAALATTLTLVAIKLV 256


>gi|256828494|ref|YP_003157222.1| hypothetical protein Dbac_0683 [Desulfomicrobium baculatum DSM
           4028]
 gi|256577670|gb|ACU88806.1| protein of unknown function DUF81 [Desulfomicrobium baculatum DSM
           4028]
          Length = 413

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 8/110 (7%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT- 94
           L+   GVGGG ++VP L+   QL        M++A GTS   +  + + S +     GT 
Sbjct: 298 LAAFLGVGGGFLLVPFLTSITQL-------PMYLAAGTSALAVLVSMITSILTLMTKGTP 350

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           ++  ++   +  + I ++V      +     L + F +    +GI  + +
Sbjct: 351 VDWVLIGTEMVGVAIGSIVGPHTSKYFSDKLLKRLFIVLAFYVGIDYVLK 400



 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 12/112 (10%)

Query: 166 TGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
              L+  LGVGGG      +       +Y A  TSA    +    ++L  +  G  ++ +
Sbjct: 295 ISALAAFLGVGGGFLLVPFLTSITQLPMYLAAGTSALAVLVSMITSILTLMTKGTPVDWV 354

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              +        ++ +   SI    +    S     K L   F ++ F    
Sbjct: 355 LIGT-------EMVGVAIGSI----VGPHTSKYFSDKLLKRLFIVLAFYVGI 395


>gi|67466247|ref|XP_649271.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
 gi|56465670|gb|EAL43888.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
          Length = 460

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 54/124 (43%), Gaps = 13/124 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +I + +F +G  +   G+GGG+V+ P+L +          +   VA  TS  +I  T+ 
Sbjct: 310 LIIPIGAFFAGVSAAYLGIGGGMVIGPILLEI--------GVLPQVATATSAFMIMFTAS 361

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVT----SLMISHVDKSFLNKAF-AIFCLLMG 138
            S +++   G +++     +  +  I         S ++  +++  +   F  +  +L  
Sbjct: 362 SSSLQYIIDGKLDIFYGIWYFAIGFIGAAFGQFGFSKIVQKLNRQSIIGFFLGVLIVLST 421

Query: 139 ILML 142
           + M+
Sbjct: 422 LAMI 425



 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 26/58 (44%)

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           I     G  +  LG+GGG+    ++L  G     ATATSA +    A  + L  I  G
Sbjct: 314 IGAFFAGVSAAYLGIGGGMVIGPILLEIGVLPQVATATSAFMIMFTASSSSLQYIIDG 371


>gi|33595919|ref|NP_883562.1| hypothetical protein BPP1250 [Bordetella parapertussis 12822]
 gi|33565998|emb|CAE36552.1| probable membrane protein [Bordetella parapertussis]
          Length = 265

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             +SG  +GL GVGGG ++VP L +            MH  + TSL VIA  S ++    
Sbjct: 153 GAISGLFTGLLGVGGGFIIVPALRQF-------SDAPMHAIVSTSLMVIALISAVTVGHA 205

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
              G         ++    +  V+   +   +  + L + FA+ C+++  ++L R     
Sbjct: 206 VADGLTLGAAAWTFVAAAVLGMVLGRALAPRLPTARLQQLFALVCVVVAGVLLWRTGWQA 265



 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 77/248 (31%), Gaps = 40/248 (16%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     +     +    +A+G +  V          E  R GT+  K       V  
Sbjct: 26  VPALVLGLGMDMPQAAPVALMAVGLAAAV-------GSAEGLRRGTVRYKAAALMSVVGG 78

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD--------------------RLY 148
           +     + +       +L+  FA+  LL+   ML++                        
Sbjct: 79  LAAPWGAQLARLAPGPWLSGLFAMVMLLVAGRMLRQSLAAPAGAQAQAERPCHISPQTGK 138

Query: 149 CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIA 207
                         G ++G  +G LGVGGG      +  +  A ++   +TS  V ALI+
Sbjct: 139 FAWTPRAAATLGGIGAISGLFTGLLGVGGGFIIVPALRQFSDAPMHAIVSTSLMVIALIS 198

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
              +   +  G  L                   +  ++L   L   L+  +    L   F
Sbjct: 199 AVTVGHAVADGLTLGAA------------AWTFVAAAVLGMVLGRALAPRLPTARLQQLF 246

Query: 268 SMIMFTTS 275
           +++    +
Sbjct: 247 ALVCVVVA 254


>gi|254778932|ref|YP_003057037.1| hypothetical protein HELPY_0230 [Helicobacter pylori B38]
 gi|254000843|emb|CAX28775.1| Conserved hypothetical protein; putative membrane protein
           [Helicobacter pylori B38]
          Length = 277

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 74/215 (34%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G ++++          +  ++ S ++  ++   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLREGSFAALGGLMGAILGSFILKIINDKILMGVFVVVVCYTFIKYAFS 119

Query: 145 DRLYCE-------------------RKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
                E                   R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 SNKKPEHFEEMHFDLHANNKTPEKKRAIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|258538253|ref|YP_003172752.1| hypothetical protein LC705_00062 [Lactobacillus rhamnosus Lc 705]
 gi|257149929|emb|CAR88901.1| Conserved protein [Lactobacillus rhamnosus Lc 705]
          Length = 180

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 67/186 (36%), Gaps = 13/186 (6%)

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER--- 151
           ++ ++         +  ++   +   +  S++     +  LL GI +L + R   +    
Sbjct: 1   MDRRVAYLLSGGSFVGAIIGVRLNLLLPTSWVQFLLYLVVLLSGIAILIQQRHPPKPGVD 60

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
                 +  I G+VTG +    G GG +    L++  G   + A   +   S  I+ PA 
Sbjct: 61  HLNQPVLLVILGVVTGLICALSGAGGPVLVMPLLVLLGCEPHAAVGIALLNSVFISLPAA 120

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +  +     +  LP           + +I+    +   + +++   I  + L  G ++  
Sbjct: 121 VGYLSQVQFMTTLPL----------LAMIIVTHGIGVIVGSRIGPKIDGRLLKNGTAIFS 170

Query: 272 FTTSFV 277
                +
Sbjct: 171 IILGCI 176


>gi|254796626|ref|YP_003081462.1| domain of unknown function, putative [Neorickettsia risticii str.
           Illinois]
 gi|254589863|gb|ACT69225.1| domain of unknown function, putative [Neorickettsia risticii str.
           Illinois]
          Length = 311

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 107/311 (34%), Gaps = 62/311 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++     V   +  +I    +SG ++GLFG+GG ++++P L            +   V
Sbjct: 2   VQIYFPIAEVAIPLYAVIALGLISGIMAGLFGIGGNIIIIPTLIFM--------GVAPAV 53

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD--KSFLN 127
           A+ +++     +   SF+   + G  ++ I             + S ++ ++    +   
Sbjct: 54  AVSSAVNQTIASGFASFLNQFKQGNADLPIALSLSLGSLFGITLGSFLLMYLRNTGNVDI 113

Query: 128 KAFAIFCLLMGI-------------LMLKRDRLYCERKFPDNY----------------- 157
             F ++ +++ I             L L R+ +         Y                 
Sbjct: 114 AIFLVYVVMLSITGCVMAFDSIRKLLFLFRNEIGLHEHMEKPYKNKFIKLVNGLPLRYYF 173

Query: 158 ----------VKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALI 206
                       +++G V G +    GVGGG     ++++ +   +  A  TS   S L+
Sbjct: 174 RSAKGDISLVALFLFGTVVGVILSISGVGGGFILVPVLMYVFNLPVRIAIGTSVAQSVLV 233

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
           +   +                +LG V++    ++   +I       KL+ +     + + 
Sbjct: 234 SVATVFFHTI-----------TLGTVDMLLGFLLSIGAICGVTFGAKLNLIFHPVVIRLL 282

Query: 267 FSMIMFTTSFV 277
            + +MF     
Sbjct: 283 LAFVMFGAVLR 293



 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 48/131 (36%), Gaps = 8/131 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + +   + G +  + GVGGG ++VPVL   F       ++ + +A+GTS+      S
Sbjct: 182 LVALFLFGTVVGVILSISGVGGGFILVPVLMYVF-------NLPVRIAIGTSVAQSVLVS 234

Query: 83  VMSFMEH-RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           V +   H    GT++M +               + +        +    A       + +
Sbjct: 235 VATVFFHTITLGTVDMLLGFLLSIGAICGVTFGAKLNLIFHPVVIRLLLAFVMFGAVLRL 294

Query: 142 LKRDRLYCERK 152
           +    +  E  
Sbjct: 295 VFTLLVTPENP 305


>gi|159041513|ref|YP_001540765.1| hypothetical protein Cmaq_0943 [Caldivirga maquilingensis IC-167]
 gi|157920348|gb|ABW01775.1| protein of unknown function DUF81 [Caldivirga maquilingensis
           IC-167]
          Length = 332

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 83/266 (31%), Gaps = 52/266 (19%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V+VPVL+           I +  A G +L     TS  +   + +    N++I      
Sbjct: 34  TVLVPVLTLFL-------GIPIAYAAGAALISTISTSSGAASAYIKDKITNIRIGMGLEI 86

Query: 106 VLPITTVVTSLMISHVDKSFLNKA----FAIFCLLMGILMLKRDRLYCERKFPDNYVKYI 161
                ++V SL ++++    L       F I  L+  I   +R +       P ++   +
Sbjct: 87  ATTTGSIVGSLTVAYIYSHNLEWIVYVVFGIVILMSIIPTAQRSKYEIPDPKPPDWTTKV 146

Query: 162 WG----------------------------MVTGFLSGALGVGGGIFTNLLMLF-YGASI 192
           +                                GF+SG LG+G G    L M +     +
Sbjct: 147 FKLYGSYYDDALKMEVKYWGVRWWLGELIMFFAGFISGLLGIGSGALKVLGMDWAMNLPM 206

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             +T TS  +  + A     +             W LG++            ++     T
Sbjct: 207 KVSTTTSNFMIGVTAATGSSIY------------WYLGYIQPFIAAATAIGVLIGAMAGT 254

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++   I  K +   F  I+       
Sbjct: 255 RILVRITNKQVRWVFLAILAFLGMEM 280



 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G +SGL G+G G + V  +  A        ++ M V+  TS  +I  T+      + 
Sbjct: 177 FFAGFISGLLGIGSGALKVLGMDWAM-------NLPMKVSTTTSNFMIGVTAATGSSIYW 229

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I   I       + I  +  + ++  +    +   F      +G+ ML R
Sbjct: 230 YLGYIQPFIAAATAIGVLIGAMAGTRILVRITNKQVRWVFLAILAFLGMEMLLR 283


>gi|194290561|ref|YP_002006468.1| hypothetical protein RALTA_A2474 [Cupriavidus taiwanensis LMG
           19424]
 gi|193224396|emb|CAQ70407.1| conserved hypothetical protein, DUF81; putative TRANSMEMBRANE
           PROTEIN [Cupriavidus taiwanensis LMG 19424]
          Length = 257

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 81/248 (32%), Gaps = 36/248 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L+  F   G   +     A+GT L   + T     + HR HG +  ++++     
Sbjct: 26  LMTPLLTLLF---GFSPAT----AVGTDLAFASITKGFGTIAHRAHGHVQWQVVRRLCIG 78

Query: 107 LPITTVVTSLM---ISHVDKSFLNKAFAIFCLLMGI---------LMLKRDRLYCERKFP 154
                V   L+      +D  +L+       + + +          ML         +  
Sbjct: 79  SLPAAVAAILVLKSAGELDGRWLHAIRVTIGVSVLLTVLSLLFRRQMLAWLERNPRFQLH 138

Query: 155 DN---YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA--TATSAGVSALIAFP 209
                    I G V G L     +G G     L+L     +  A    T    +  +   
Sbjct: 139 GRKQVVATVIVGAVIGVLVTVSSIGAGAVGATLILLLYPHMKPAEVAGTDIAYAVPLTAL 198

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           A L  ++            LG V+   +L +L  SI    L  +LS  + ++ +    + 
Sbjct: 199 AGLGHVW------------LGTVDWNLLLALLVGSIPGIWLGAQLSRALPERLVRAALAT 246

Query: 270 IMFTTSFV 277
            +   +  
Sbjct: 247 TLTLVAIK 254



 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 45/120 (37%), Gaps = 6/120 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +   ++   + G L  +  +G G V   ++   +  M   +        GT +    P +
Sbjct: 143 VVATVIVGAVIGVLVTVSSIGAGAVGATLILLLYPHMKPAEVA------GTDIAYAVPLT 196

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++ + H   GT++  +L   +        + + +   + +  +  A A    L+ I ++
Sbjct: 197 ALAGLGHVWLGTVDWNLLLALLVGSIPGIWLGAQLSRALPERLVRAALATTLTLVAIKLV 256


>gi|116250903|ref|YP_766741.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255551|emb|CAK06628.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 260

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 76/202 (37%), Gaps = 11/202 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++ +  + G + GL G GG ++  P+L     +         H+A+GT    ++  +
Sbjct: 5   ILAVVGSGGIVGFMLGLLGGGGSILATPLLLYVVGV------TQPHIAIGTGALAVSVNA 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +F  H   G +  +    +  +  I  +  S +   +D   L   F +  +++G LML
Sbjct: 59  FANFASHAIKGHVWWRCAAVFSALGVIGALGGSSLGKAMDGDSLIFLFGVLMMVVGALML 118

Query: 143 KRDRLYCERKFPDNYVKYI----WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           K  +       P +    +      +  G  SG  G+GGG      LML  G  +  A  
Sbjct: 119 KPRKAVTVECRPVDLRMCLATAAVALAAGAASGFFGIGGGFLIVPGLMLATGMPMINAIG 178

Query: 198 TSAGVSALIAFPALLVRIYSGW 219
           TS            L    SG 
Sbjct: 179 TSLLSVGAFGLATALNYASSGL 200


>gi|332977463|gb|EGK14238.1| membrane protein [Psychrobacter sp. 1501(2011)]
          Length = 251

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 85/209 (40%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +     ++ I ++   + ++G +  + G GGGL+ +P +  A        +I   + +GT
Sbjct: 1   MDLSLTLEVILMLTAVAAVAGFIDAIAG-GGGLLTIPAMLLA--------NIPPVLTLGT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +    A  ++ + +   + G ++   +K  I    I +V+ ++ +       L K     
Sbjct: 52  NKLQAASGALTASITMIKKGVVSPSKMKLAIAGAFIGSVLGTIAVQMSPPDILEKLIPFL 111

Query: 134 CLLMGILMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYG 189
              +GI  L    L     E +  ++  + +   + GF  G +G G G+F  L  +   G
Sbjct: 112 IAAIGIYTLFAPSLGEVEAEPRVSESTWQRVVAPLIGFYDGYVGPGTGMFFALGNVALRG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             I  AT  +  ++      +L+  I  G
Sbjct: 172 RQIIAATGAAKVLNLSTNIASLIFFIIGG 200


>gi|302385305|ref|YP_003821127.1| protein of unknown function DUF81 [Clostridium saccharolyticum WM1]
 gi|302195933|gb|ADL03504.1| protein of unknown function DUF81 [Clostridium saccharolyticum WM1]
          Length = 248

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 77/195 (39%), Gaps = 16/195 (8%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           FL+G +  + G GGGL+ +P     +   GI      H A+GT+       +V+S   + 
Sbjct: 12  FLAGFVDSIAG-GGGLISLPA----YLAAGIPP----HFAIGTNKLGSTMGTVISTARYA 62

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL--- 147
           + G I  K+      +    +V+ + +     +  L         ++   +L+   L   
Sbjct: 63  KGGYIKAKLSLSAALLAVAGSVIGAHLSMLASERVLKGMMLAVLPVVAFYVLRNKNLGER 122

Query: 148 YCERKFPDNYVKYI---WGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVS 203
             ++  P+  +  I     +V G   G  G G G F  L++       +  A+ T+  ++
Sbjct: 123 EEDKGLPEKKMILISMCAALVIGCYDGFYGPGTGTFLLLILTGLAKMDVRSASGTTKVIN 182

Query: 204 ALIAFPALLVRIYSG 218
                 AL+  + +G
Sbjct: 183 LSSNIAALVTFLING 197


>gi|194367488|ref|YP_002030098.1| hypothetical protein Smal_3716 [Stenotrophomonas maltophilia
           R551-3]
 gi|194350292|gb|ACF53415.1| protein of unknown function DUF81 [Stenotrophomonas maltophilia
           R551-3]
          Length = 253

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 81/242 (33%), Gaps = 24/242 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
               I+    +  + G  G+  GLV     S     MG+  +        +       T+
Sbjct: 7   FWWFILIGLGAQLVDGALGMAFGLVS----SSVMLSMGLPPAQV----SASIHTAEVFTT 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H   G ++ ++         +   V + +++ +    +     ++ L++ I++L
Sbjct: 59  GASGVSHLAAGNVDKRLFLRLALPGAVGGAVGAYVLTQIPGDIIRPLIYLYLLVLAIIIL 118

Query: 143 KRDRLYCERKFPDNYVKY--IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
            R      R  P   ++   + G   G L  + G G G      +L  G        T  
Sbjct: 119 AR---AAGRWMPKGEIRRVPVLGFFAGLLDASGGGGWGPVATSTLLARGGQARTTIGTVN 175

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
               ++        +            S+G  ++  V  +L   ++  P+A  L   + +
Sbjct: 176 AAEFIVTLTISATFLL-----------SMGVQHLQIVAGLLIGGMMAAPVAAILVKRVKE 224

Query: 261 KY 262
           ++
Sbjct: 225 RW 226


>gi|329754340|gb|AEC03568.1| magnetosome protein MamO [alpha proteobacterium UT-2]
          Length = 587

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 70/222 (31%), Gaps = 48/222 (21%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                 + + + +   +    +K  I       VV   + + +  S +     +F L+M 
Sbjct: 374 VFVYGATALRNDKAQLVQWNKVKPLIPWGVAGVVVGYFIGNAIGDSVVGVLLGLFALIMA 433

Query: 139 -------------------------------ILMLKRDRLYCERK---FPDNYVK-YIWG 163
                                          ++ L       +      PD  V+  + G
Sbjct: 434 GKAVLEIIRPDAGEGDLAPVSPVSADEEMDELMALASGDAKAKSDGLDLPDGPVRNAVLG 493

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           +  G  SG LG+ GG+    L  + G  ++  A A S+ +    +   + V    G    
Sbjct: 494 LPMGLFSGILGISGGVVEVPLQRYVGRMTLQNAIANSSVLVFWASVAGVAVSFLHGT--- 550

Query: 223 GLPPWSLGFVNIGA----VLIILPISILITPLATKLSYMIGK 260
                S G ++  A      +++P + +   +  +L  ++  
Sbjct: 551 -----STGMIHWEAPVTLAAVMIPGAYVGGIIGARLLRVLPV 587



 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 11/99 (11%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V     G  SG+ G+ GG+V VP+             + +  A+  S  ++   SV   
Sbjct: 490 AVLGLPMGLFSGILGISGGVVEVPLQRYV-------GRMTLQNAIANSSVLVFWASVAGV 542

Query: 87  MEHRRHGT----INMKILKDWIFVLPITTVVTSLMISHV 121
                HGT    I+ +       V+     V  ++ + +
Sbjct: 543 AVSFLHGTSTGMIHWEAPVTLAAVMIPGAYVGGIIGARL 581


>gi|237729128|ref|ZP_04559609.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908857|gb|EEH94775.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 261

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 91/236 (38%), Gaps = 25/236 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            Y  ++ + + ++G ++ + G GGG + +  L            +    A+ T+      
Sbjct: 16  SYFVVMFMVALVAGFINVVSG-GGGFLSIGALLI--------SGLPPANALATNKIQALG 66

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +S+ S +   R G IN++  K       I + + + +I  ++   L K   I  + + I 
Sbjct: 67  SSLTSGIYFLRRGHINVQEHKYVFLSAFIGSALGTTLIQFIEPELLKKLLPILIIAVAIY 126

Query: 141 MLKRDR---LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            +          +++        I G   GF  G LG G G F  L  +L +G SI KA 
Sbjct: 127 FIFAPNLSEPKRKQQVSLFLFSLIGGGCIGFYDGFLGAGAGSFYTLSYILLWGYSIDKAQ 186

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             S  ++      ++L  I+ G  +     WSLG       L++     L   L  
Sbjct: 187 IHSNFINLASNIASILFFIFGGKMI-----WSLG-------LVMFAGQSLGARLGA 230


>gi|194367774|ref|YP_002030384.1| hypothetical protein Smal_4002 [Stenotrophomonas maltophilia
           R551-3]
 gi|194350578|gb|ACF53701.1| protein of unknown function DUF81 [Stenotrophomonas maltophilia
           R551-3]
          Length = 259

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 89/263 (33%), Gaps = 25/263 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++V +F++G +    G GGGLV +P L                +  GT+       +
Sbjct: 9   LWWLVVIAFIAGLVDAAVG-GGGLVQLPGLFTVLPQQ------TPAMLFGTNKFSSMFGT 61

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R+     K +        I +   +  +S + K  +     +  + M    L
Sbjct: 62  GAAAWRYARNVRFPWKPVLFAAGTAFIFSFAGATAVSLLPKDAVRPLVLVLLIAMLAYTL 121

Query: 143 KRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +       +       +  +    G   GF  G  G G G     L + F+G    +A+
Sbjct: 122 WKKDFGALHRPQEIGRRELAIALAIGAAIGFYDGFFGPGTGSFLIFLFVRFFGLDFLRAS 181

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A S  V+      A+   + +            G +     L +   +I+ + + T+L+ 
Sbjct: 182 AASKVVNLATNVAAISFFVPT------------GNILWLFALPMAAANIIGSVVGTRLAL 229

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
             G  ++   F  ++       A
Sbjct: 230 KGGTPFIRKLFVGLVVVLIARMA 252


>gi|127514022|ref|YP_001095219.1| hypothetical protein Shew_3094 [Shewanella loihica PV-4]
 gi|126639317|gb|ABO24960.1| protein of unknown function DUF81 [Shewanella loihica PV-4]
          Length = 253

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 93/258 (36%), Gaps = 34/258 (13%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  + +  L++V  FL+G ++ L G GG  + +P L            +   VA  T+  
Sbjct: 2   EITLTHGLLLVVTGFLAGIINTLAG-GGSNLTLPALMVM--------GLPAEVANATNRV 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   S+ + +   +HG ++ +     +    +   + + + ++   + +        LL
Sbjct: 53  GVTVQSITALLGFHKHGKLDTQDKGPILLPTILGGFIGAGLAAYAPSTLIKPLLLGTMLL 112

Query: 137 MGILMLKRDRL----------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
           M +++L R  +            +      +   + G+  GF+   +G    +    L  
Sbjct: 113 MALIILVRPAIIAPELGTPVNRVKNTPSSWFWLTLAGIYGGFVQAGVGF---VLLAALAG 169

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
                + +A A     +      +LLV I                + +  ++ +   +++
Sbjct: 170 SLRYDLVRANALKVFCTLFFTLASLLVFIKEDL-----------ILWLPGLI-LAAGTMV 217

Query: 247 ITPLATKLSYMIGKKYLT 264
              LA KL+  +  K L 
Sbjct: 218 GAHLAVKLAIKVSPKVLK 235


>gi|317010506|gb|ADU84253.1| hypothetical protein HPSA_01145 [Helicobacter pylori SouthAfrica7]
          Length = 277

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 75/215 (34%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++++    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILVLVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G +++K          +  V+ S ++  +D   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLKEGSFAALGGLMGAVLGSFILKIIDDKILMSVFVVVVCYTFIKYAFS 119

Query: 145 -------------------DRLYCERKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
                                   +R  P       + V  + G +TG  S  LG+GGGI
Sbjct: 120 SNKQPKHFEEMHFALHANGKTPEKKRALPFVSMDRTHGVLMLAGFITGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|206601625|gb|EDZ38108.1| Conserved hypothetical protein [Leptospirillum sp. Group II '5-way
           CG']
          Length = 256

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 84/249 (33%), Gaps = 22/249 (8%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
           +SGL G+GG ++++P +        +  +     A   S+  +   SV  ++ HR    +
Sbjct: 17  VSGLLGIGGAVILIPYVLYVVPSF-LSRTFTPFEATQISMFQVFFASVAGYVTHRPQLLL 75

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD 155
            +K L  W     + + +   +  H+    +   +     ++  L L   +     + PD
Sbjct: 76  PVKTLLAWGGAALLGSAIGGTLSGHLPGKEILVLY--LAEILLALFLLHRKPRPAEQTPD 133

Query: 156 NY-------VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
                       + G +          GG ++  ++    G +   A  +S G+   +AF
Sbjct: 134 RLAWRRTFGAPVLMGGIGLVSGLLGIGGGFLYYPVMTGLLGYNARVAVGSSLGIMIPMAF 193

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
             ++ +  S                      +   ++  +    +L   +    +  G +
Sbjct: 194 SGMIAKTLSSGSFPD------------GTFPVAIGALAGSIAGARLHRGLTPAKIRWGQT 241

Query: 269 MIMFTTSFV 277
           +++  T   
Sbjct: 242 LLLVATFAR 250


>gi|198284482|ref|YP_002220803.1| hypothetical protein Lferr_2398 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218668016|ref|YP_002427146.1| membrane protein [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198249003|gb|ACH84596.1| protein of unknown function DUF81 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218520229|gb|ACK80815.1| membrane protein [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 261

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 79/198 (39%), Gaps = 10/198 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A  + G   GL G GG ++ VP+L      +G+ D    H+ +GT+   +   + ++
Sbjct: 12  CILAGVIVGFSLGLIGGGGSILAVPLLLY---WVGVHDP---HLVIGTTALAVGINAFIN 65

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR- 144
            + H R G +   +   +     I     + +   ++  +L   FA+  L + + M +  
Sbjct: 66  LIPHARAGNVRWAVAIRFTIAGIIGAFAGAELGKAINGKYLLILFALLMLWIAVSMYRTR 125

Query: 145 -DRLYCERKFPD-NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAG 201
             +    +  P  +   Y +G  TG LSG  G+GGG      LM      I  A A+S  
Sbjct: 126 EKQPVVHKNIPKHHAWVYFYGGGTGVLSGFFGIGGGFLIVPALMRSARLPILNAVASSLL 185

Query: 202 VSALIAFPALLVRIYSGW 219
               +     +     G 
Sbjct: 186 AVGALGTATAISYSLEGL 203



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 42/101 (41%), Gaps = 9/101 (8%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++VP L +          + +  A+ +SL  +      + + +   G ++ +I  ++I  
Sbjct: 163 LIVPALMR-------SARLPILNAVASSLLAVGALGTATAISYSLEGLVDWRIAAEYIAG 215

Query: 107 LPITTVVTSLMISHVDKS--FLNKAFAIFCLLMGILMLKRD 145
             +   + +L    + +    LN  F    +L+ I ML R+
Sbjct: 216 GILGGWLGALSADKLGQRKAALNDIFIGAIVLVAIYMLYRE 256


>gi|124515324|gb|EAY56834.1| conserved hypothetical protein [Leptospirillum rubarum]
          Length = 256

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 83/249 (33%), Gaps = 22/249 (8%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
           +SGL G+GG ++++P +        +  +     A   S+  +   SV  ++ HR    +
Sbjct: 17  VSGLLGIGGAVILIPYVLYVVPSF-LSRTFTPFEATQISMFQVFFASVAGYVTHRPQLLL 75

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD 155
            +K L  W       + +   +   +    +   +     ++  L L   +     + PD
Sbjct: 76  PLKTLLAWGGAALFGSAIGGALSGRLPGKVILVLY--LAEILLALFLLHRKPRPAEQTPD 133

Query: 156 NY-------VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
                       + G +          GG ++  ++    G S   A  +S G+   +AF
Sbjct: 134 RLAWRRTFGAPVLMGGIGLVSGLLGIGGGFLYYPVMTGLLGYSARVAVGSSLGIMIPMAF 193

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
             ++ +  S                      +   ++  + +  +L   +    +  G +
Sbjct: 194 SGMIAKTLSSGSFPD------------GTFPVAIGALAGSIVGARLHRRLTPAKIRWGQT 241

Query: 269 MIMFTTSFV 277
           +++  T   
Sbjct: 242 LLLVATFAR 250


>gi|108562653|ref|YP_626969.1| hypothetical protein HPAG1_0228 [Helicobacter pylori HPAG1]
 gi|107836426|gb|ABF84295.1| conserved hypothetical integral membrane protein [Helicobacter
           pylori HPAG1]
          Length = 277

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 74/215 (34%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK- 143
             + + + G ++++          +  ++ S ++  +D   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLREGSFAALGGLMGAILGSFILKIIDDKILMAVFVVVVCYTFIKYAFS 119

Query: 144 ------------------RDRLYCERKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
                                   +R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 SNKKPKHFEEMHFDLHANNKTPEKKRSIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|262280305|ref|ZP_06058089.1| permease [Acinetobacter calcoaceticus RUH2202]
 gi|262258083|gb|EEY76817.1| permease [Acinetobacter calcoaceticus RUH2202]
          Length = 258

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 94/256 (36%), Gaps = 25/256 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D I  +I  +F +G +    G GGGL+ +P L   F  M           +GT+      
Sbjct: 6   DVILSLIFFAFTAGAIDAAVG-GGGLIQIPGLMSTFPTMQ------TATVIGTNKLSSIF 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     +   +  K+L        I++   +  +S + +S L     I  +++ I 
Sbjct: 59  GTASAAYTFAKRVKLQWKLLAVIAICALISSFAGAACLSLIPQSVLRPFVFIMLIVIAIY 118

Query: 141 MLKRDRLYC--ERKFPDNYVKYIWGMV---TGFLSGALGVG-GGIFTNLLMLFYGASIYK 194
            L +         +   N +  + G+     GF  G  G G G  F    + F       
Sbjct: 119 TLVKKNFGQVHTEQKITNKMLVLAGIGSLAIGFYDGIFGPGTGSFFIFFFIRFLQVDFLH 178

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A S   + +  F AL   I +G  +            +   L++   ++L + +  + 
Sbjct: 179 ASALSKIGNFMTNFAALSFFIPTGHAI------------LHIGLMMAVANVLGSIIGVRT 226

Query: 255 SYMIGKKYLTIGFSMI 270
           +   G  ++ I F ++
Sbjct: 227 ALKYGSGFVRIIFLIL 242


>gi|290960608|ref|YP_003491790.1| integral membrane protein [Streptomyces scabiei 87.22]
 gi|260650134|emb|CBG73250.1| putative integral membrane protein [Streptomyces scabiei 87.22]
          Length = 280

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 64/198 (32%), Gaps = 20/198 (10%)

Query: 66  CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
               A+GT+  V    +  + + + R   ++++I           +   +L+ + +    
Sbjct: 65  AAQYALGTNKAVAIVGTTGAAVTYARRTPVDVRIAVRIGLAALAGSTAGALVAAGLSTEI 124

Query: 126 LNKAFAIFCLLMGILMLKRDRLYCERKFPDN-------YVKYIWGMVTGFLSGALGVGGG 178
           L        L +G  ++ R                       + G+  GF  G +G G G
Sbjct: 125 LKPVVMAVLLAVGAFVILRPSFGTTAPATGPVSARRVLAAVGLAGVGIGFYDGLIGPGTG 184

Query: 179 IFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
            F  L +       +  A+AT+  V+      AL +  + G             V     
Sbjct: 185 TFLVLALTALLHLDLVTASATAKIVNCCTNAGALAMFAWKGT------------VYWQLA 232

Query: 238 LIILPISILITPLATKLS 255
            ++   +++   +  + +
Sbjct: 233 ALMAVFNLVGGTVGARTA 250


>gi|220907725|ref|YP_002483036.1| hypothetical protein Cyan7425_2317 [Cyanothece sp. PCC 7425]
 gi|219864336|gb|ACL44675.1| protein of unknown function DUF81 [Cyanothece sp. PCC 7425]
          Length = 265

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 67/192 (34%), Gaps = 13/192 (6%)

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-----KRDRLY 148
             N  ++ + +    I + +    ++ +++  LN+   +F + +  +++          +
Sbjct: 72  AANWFVVINILAGSLIGSYLGVHYVTRINEQVLNRVVVVFLIFLSAVLIGHDYIFSIESF 131

Query: 149 CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIA 207
                    +  I G++ G  S  LGV GG      ++L +   I  A + S  +S    
Sbjct: 132 QLPPLLRISLGLIAGVIIGLFSSMLGVAGGELIIPTIILLFSLDIKLAGSLSLAISIPTI 191

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
              L                +        +L +   S+L   + ++L   I    L +  
Sbjct: 192 MMGLFKYSSQQRLREVKTEQNF-------ILFMAAGSVLGALIGSQLLRYISSSLLYLIL 244

Query: 268 SMIMFTTSFVFA 279
             I+  ++F  A
Sbjct: 245 GTILLLSAFKLA 256



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 12/124 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L ++A  + G  S + GV GG +++P +   F L        + +A   SL +  PT 
Sbjct: 139 ISLGLIAGVIIGLFSSMLGVAGGELIIPTIILLFSLD-------IKLAGSLSLAISIPTI 191

Query: 83  VMSFMEHRRHGTIN-----MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +M   ++     +         +        +  ++ S ++ ++  S L        LL 
Sbjct: 192 MMGLFKYSSQQRLREVKTEQNFILFMAAGSVLGALIGSQLLRYISSSLLYLILGTILLLS 251

Query: 138 GILM 141
              +
Sbjct: 252 AFKL 255


>gi|308050633|ref|YP_003914199.1| hypothetical protein Fbal_2923 [Ferrimonas balearica DSM 9799]
 gi|307632823|gb|ADN77125.1| protein of unknown function DUF81 [Ferrimonas balearica DSM 9799]
          Length = 289

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 87/251 (34%), Gaps = 34/251 (13%)

Query: 41  GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN---- 96
           G GGG+V +P     F  +G+D       A+ TS  + +       +   R+   +    
Sbjct: 56  GAGGGVVFIPA----FHQLGLDADA----AVATSFAIQSFGMTAGAVAWWRYARRDRLGA 107

Query: 97  ----MKILKDWIFVLPITTVVTSLMISHVDK----SFLNKAFAIFCLLMGILMLKRDRLY 148
                + L   +      T+   L+   +        L   F++    + +LM  R    
Sbjct: 108 HEGIWRPLLPSVGYTLAGTLPGLLLGRILPSPSELHALFALFSVMLGSVILLMSFRAIPD 167

Query: 149 CERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
             R+      N    + G+V G ++  L VG G    ++++        A A    VSAL
Sbjct: 168 QPRQRLTPRWNMALIMLGLVGGVITAWLSVGIGELLVIVLMLLRCHSATAVAAGVIVSAL 227

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
             + A+++ +  G                  VL   P ++L   LA  L+ ++    L  
Sbjct: 228 TVWVAMILNLTQGAPFQ-----------WPIVLFAGPAAVLGGLLARHLATVMSPLQLKR 276

Query: 266 GFSMIMFTTSF 276
            F+  +     
Sbjct: 277 FFACWILFVGL 287


>gi|268682750|ref|ZP_06149612.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Neisseria
           gonorrhoeae PID332]
 gi|268623034|gb|EEZ55434.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Neisseria
           gonorrhoeae PID332]
          Length = 260

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 61/189 (32%), Gaps = 21/189 (11%)

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD 155
           + K             VV +L +S V K  L     +  + + +  +   +L   ++   
Sbjct: 69  DWKKGLPIAAASFAGGVVGALSVSLVSKDILLAVVPVLLIFIALYFVFSPKLDGSKEGKA 128

Query: 156 NYVKYIWGM----VTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPA 210
               +++G+    + GF  G  G G G  F    ++  G  +  A + +   +      +
Sbjct: 129 RMSFFLFGLTVAPLLGFYDGVFGPGVGSFFLIAFIVLLGCKLLNAMSYTKLANVACNLGS 188

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           L V +  G             +    V  +   + +   L  + +   G K +      +
Sbjct: 189 LSVFLLHGS------------IIFPIVATMAVGAFVGANLGARFAVRFGSKLIKP----L 232

Query: 271 MFTTSFVFA 279
           +   S   A
Sbjct: 233 LIVISISMA 241


>gi|329903699|ref|ZP_08273584.1| hypothetical protein IMCC9480_1568 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327548247|gb|EGF32945.1| hypothetical protein IMCC9480_1568 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 246

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 85/246 (34%), Gaps = 34/246 (13%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L+  F        I   VA+GT L   + T V     HR  G ++ +I++      
Sbjct: 16  MTPLLTLLF-------GISPTVAVGTDLAFASATKVAGTFAHRFRGNVHWEIVRRLCLGA 68

Query: 108 PITTVVTSLMISHVD------KSFLNKAFAIFCLLMGILMLKRDRLY------CERKFPD 155
               V  +L++ +           +  + A   +L  I +L R R+        + +   
Sbjct: 69  LPAAVAATLVLKYFGGLDESIGQIIRYSIAGSVMLTVIAILFRTRMQRWMAAHPQYQLEG 128

Query: 156 NY---VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL- 211
           +       + G+V G L     +G G     L++     +  A                 
Sbjct: 129 SRQANATIMAGVVLGTLVTISSIGAGAVGATLLVLLYPKLKPA-----------EIAGTD 177

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +        +  L  W +G +N   ++++L  S+    + +  +  +  K L    ++ +
Sbjct: 178 IAYAVPLTAIAALGHWWIGSINWALLIMLLIGSVPGITIGSLAARAVPDKLLRGLLAVTL 237

Query: 272 FTTSFV 277
              +F 
Sbjct: 238 TGVAFK 243



 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+A  + GTL  +  +G G V   +L   +  +   +        GT +    P + ++ 
Sbjct: 136 IMAGVVLGTLVTISSIGAGAVGATLLVLLYPKLKPAEIA------GTDIAYAVPLTAIAA 189

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + H   G+IN  +L   +        + SL    V    L    A+    +   ++ 
Sbjct: 190 LGHWWIGSINWALLIMLLIGSVPGITIGSLAARAVPDKLLRGLLAVTLTGVAFKLVF 246


>gi|315181116|gb|ADT88030.1| hypothetical protein vfu_A02918 [Vibrio furnissii NCTC 11218]
          Length = 259

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 77/199 (38%), Gaps = 16/199 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  +     R+G +++K ++  I    I + + + ++   D S L   
Sbjct: 46  ALATNKLQSSFGSFSATWYFVRNGIVSLKEMRLAIVCTFIGSAIGAELVQQFDASLLTSL 105

Query: 130 FAIFCLLMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             +  + + +  L   +      ++  P+       G   GF  G  G G G IFT   +
Sbjct: 106 IPLLLIAISLYFLLAPQTRADSGKKPLPEALFALCIGGGIGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           +    S+ +ATA +  ++      AL   + +G     LP W +G       L +     
Sbjct: 166 VLGHFSLVEATARTKVLNFTSNIAALTFFLIAG-----LPIWQIG-------LTMAVGGF 213

Query: 246 LITPLATKLSYMIGKKYLT 264
           +   +  K+    G K++ 
Sbjct: 214 IGARMGAKVVVTKGHKWIR 232


>gi|254992005|ref|ZP_05274195.1| hypothetical protein LmonocytoFSL_02054 [Listeria monocytogenes FSL
           J2-064]
          Length = 206

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 65/210 (30%), Gaps = 41/210 (19%)

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR------------- 144
           ++         I  +  + +   +  + L   F +  L     M+K+             
Sbjct: 1   RVGMFLEIATTIGAITGAFVSGLLSATALYIIFGLLLLYSAFNMIKKVGTEFPTNVKPDP 60

Query: 145 ---------------DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFY 188
                           R   + +  +    +      G  SG LG+G G F  + + +F 
Sbjct: 61  LATKLNLHDSYYDKSLRQTVDYQVANVPAGFGVMYGAGIASGLLGIGSGAFKVMALDVFM 120

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
              +  ++ATS  +  + A  +  V ++ G     +               +    ++  
Sbjct: 121 KMPLKVSSATSNLMMGVTAAASATVYLFQGDIQPAI------------AAPVAIGVLVGA 168

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            L T++   +  K + I F  ++   +F  
Sbjct: 169 TLGTRIMQRLKSKVIRIIFIPVILYVAFQM 198



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  SGL G+G G   V         + +   + + V+  TS  ++  T+  S   +   
Sbjct: 97  AGIASGLLGIGSGAFKV-------MALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQ 149

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           G I   I       + +   + + ++  +    +   F    L +   M+ 
Sbjct: 150 GDIQPAIAAPVAIGVLVGATLGTRIMQRLKSKVIRIIFIPVILYVAFQMIL 200


>gi|221633315|ref|YP_002522540.1| hypothetical protein trd_1335 [Thermomicrobium roseum DSM 5159]
 gi|221156019|gb|ACM05146.1| putative Domain of unknown function [Thermomicrobium roseum DSM
           5159]
          Length = 280

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 85/254 (33%), Gaps = 42/254 (16%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +++ + LSGTL  + G+GGG+ MVP+ S           + +  A+  S   +   S+
Sbjct: 7   LAVLIVAALSGTLGAMVGLGGGVFMVPIFSAFL-------GVPIKTAIAASALAVIVNSL 59

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                + +H  +N+++    +    +  +  ++++S      L   FA+  L   I +L 
Sbjct: 60  GGASVYLKHRMVNIRLALVLLIATTLGAIAGAVLVSIAPVDVLRLVFAL-ALYGMIALLS 118

Query: 144 RDRLYCERKFPDNYVKYIWGMV-----------------TGFLSGALGVGGGIF------ 180
             R   +          + G                    G  +                
Sbjct: 119 SRRASSDPITSGADRLSLGGAFYDPAAGTVVRYIPQRVALGTAASTFAGFLSGLLGVGGG 178

Query: 181 ---TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
                L+       +  A ATSA +  +    ++L+   +   +          V + AV
Sbjct: 179 FMQVPLMNTLMRVPVKAAAATSAYMIGVTVVGSVLLYYANDLLVPQ--------VAVPAV 230

Query: 238 LIILPISILITPLA 251
           + +   S + + L 
Sbjct: 231 IGVFLGSQIGSRLG 244


>gi|83593435|ref|YP_427187.1| hypothetical protein Rru_A2100 [Rhodospirillum rubrum ATCC 11170]
 gi|83576349|gb|ABC22900.1| Protein of unknown function DUF81 [Rhodospirillum rubrum ATCC
           11170]
          Length = 307

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 89/241 (36%), Gaps = 46/241 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + LI+    + G LSGLFGVGGG ++ P+L     L G+  +    V
Sbjct: 1   MQIYLPIAEMSVNVLLILGMGGVVGFLSGLFGVGGGFLLTPLLI----LYGVPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KS 124
           A+GT    I  TSV   + H R G ++ K+    +      +VV   + + +        
Sbjct: 53  AVGTQANQIVATSVAGVLAHMRRGNVDFKMGFVLLIGGLAGSVVGVWLFALLHRLGQIDL 112

Query: 125 FLNKAFAIFCLLMGILML--------------------------------KRDRLYCERK 152
            ++ ++ IF   +G LM                                  + R    + 
Sbjct: 113 AISLSYVIFLGAVGGLMFVESATVLIRRRRSPGVPVARGPGRHTWMHGLPLKMRFRRSKL 172

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
           +    +    G + G L+  +GVGGG      M++  G        TS      +A    
Sbjct: 173 YISAILPLTIGFLVGILAAIMGVGGGFVMVPAMIYLLGMPTQVVVGTSLFQIIFVAASTA 232

Query: 212 L 212
           +
Sbjct: 233 I 233


>gi|16082520|ref|NP_393894.1| permease [Thermoplasma acidophilum DSM 1728]
          Length = 326

 Score = 53.5 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 7/147 (4%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +  F +G +SGL G+G G + V  +  A        ++ M V   +S  +I  T+ 
Sbjct: 170 WLGEIIMFFAGMISGLLGIGSGALKVLGMDWAI-------NLPMKVTTTSSNFMIGITAA 222

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +   G I   I       + I   + + ++  +    +   F    + +GI M+ 
Sbjct: 223 TGSSIYWYAGYIQPFIAAATAIGVLIGAFLGAKILVRITNRSIRWIFFAILMFLGIQMVL 282

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLS 170
           +     +      Y ++    V   ++
Sbjct: 283 KGFYIIKVILISPYTQFAISTVISIVA 309



 Score = 48.9 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 76/265 (28%), Gaps = 52/265 (19%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VPVL+  +        I +  A G SL     TS  S   + +    N+++       
Sbjct: 35  VLVPVLTLFY-------GIPIIYATGASLISTIATSAGSASAYAKEKIANIRLGVGLEVA 87

Query: 107 LPITTVVTSLMISHVDKSFLNK----AFAIFCLLMGILMLKRDRLYCERKFPDNYVKY-- 160
                +V SL    +    L+      F    L   +  ++R +    +    ++     
Sbjct: 88  TTTGAIVGSLTAVFIYDHHLSWLIYVIFGFVLLGSLVPTIQRGKYEIPKMLKPDWTTRVF 147

Query: 161 --------------------------IWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
                                     I     G +SG LG+G G    L M +     + 
Sbjct: 148 QLSGSYYDARLHKNVEYSGVRWWLGEIIMFFAGMISGLLGIGSGALKVLGMDWAINLPMK 207

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
             T +S  +  + A     +             W  G++            ++   L  K
Sbjct: 208 VTTTSSNFMIGITAATGSSIY------------WYAGYIQPFIAAATAIGVLIGAFLGAK 255

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVF 278
           +   I  + +   F  I+       
Sbjct: 256 ILVRITNRSIRWIFFAILMFLGIQM 280


>gi|15600217|ref|NP_253711.1| hypothetical protein PA5024 [Pseudomonas aeruginosa PAO1]
 gi|9951312|gb|AAG08409.1|AE004915_4 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
          Length = 238

 Score = 53.5 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 67/200 (33%), Gaps = 14/200 (7%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S + H + G +N  +    +    I  V+ +++I+  D   L    + + LLMG
Sbjct: 45  VFTTGFSGISHVKLGNVNKSLFLRLLLPGMIGAVLGAVLITRFDGHQLKPFISAYLLLMG 104

Query: 139 ILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           + +L +  R   +R+ P +  K     + G    A G G G      ++  G+       
Sbjct: 105 LYILSKAYRHVIKRRAPRHVAKLA---LFGGFVDAAGGGWGPVVTSSLIGSGSDPRTTIG 161

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +       +   +    I      +              V  ++   +   P A  L   
Sbjct: 162 SVNFAEFFLTIASATSFILLAGQPDT----------WKMVAGLVFGGLFAAPFAALLCKK 211

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           +  + L +    ++   S  
Sbjct: 212 LSPRTLLVIVGTLITLISAY 231


>gi|73667694|ref|YP_303709.1| membrane protein, permease [Methanosarcina barkeri str. Fusaro]
 gi|72394856|gb|AAZ69129.1| conserved membrane protein, predicted permease [Methanosarcina
           barkeri str. Fusaro]
          Length = 120

 Score = 53.5 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 8/127 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + + ++    +G LSGLFG+GGG++++P L                 A GTSL  + 
Sbjct: 1   MEDLIIYLLIGAAAGILSGLFGIGGGVIIIPALVVL-------QGFSQIKAQGTSLVALL 53

Query: 80  P-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           P   +++F+E+ + G  ++         + I     +   + +    L KAF IF +L+G
Sbjct: 54  PPVGILAFLEYYKRGNTDLYAGIIICIAMVIGAKFGAQFANTLPMDVLRKAFGIFVILIG 113

Query: 139 ILMLKRD 145
           I      
Sbjct: 114 IKTFLGK 120


>gi|313675775|ref|YP_004053771.1| hypothetical protein Ftrac_1675 [Marivirga tractuosa DSM 4126]
 gi|312942473|gb|ADR21663.1| protein of unknown function DUF81 [Marivirga tractuosa DSM 4126]
          Length = 270

 Score = 53.5 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 80/232 (34%), Gaps = 10/232 (4%)

Query: 51  VLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPIT 110
           +L  AF  +GI         +  SL       + +   H +HG    K +        I 
Sbjct: 32  ILPIAFHFIGIPYEEIAQFTIANSLFGTFFAGLFATYSHIKHGEFYPKQILIISISSIIA 91

Query: 111 TVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF-------PDNYVKYIWG 163
            +++   I +    +  + F +  + +   ML       +++            +    G
Sbjct: 92  GLLSLHFIVNTP-FYSKELFNVIVIFLLAAMLLSTLFNAKKQLDFKEKNERTKRLLSFTG 150

Query: 164 MVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
              G  +   G+GGGI     +   +   + KA A S GV  + +   ++  ++      
Sbjct: 151 ASAGLTASLTGLGGGIIIIPFLNQGFKMGVKKAKAISLGVITITSLSMVIFNLFQVPMQT 210

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
              P + G++       ++  ++L      +LS  +    ++  FS+ +   
Sbjct: 211 IEAPHT-GYILFQVTGPLIIGTLLTARWGVRLSRKMKASSVSYLFSIFIVLV 261


>gi|10639586|emb|CAC11558.1| conserved hypothetical membrane protein [Thermoplasma acidophilum]
          Length = 331

 Score = 53.5 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 7/147 (4%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +  F +G +SGL G+G G + V  +  A        ++ M V   +S  +I  T+ 
Sbjct: 175 WLGEIIMFFAGMISGLLGIGSGALKVLGMDWAI-------NLPMKVTTTSSNFMIGITAA 227

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +   G I   I       + I   + + ++  +    +   F    + +GI M+ 
Sbjct: 228 TGSSIYWYAGYIQPFIAAATAIGVLIGAFLGAKILVRITNRSIRWIFFAILMFLGIQMVL 287

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLS 170
           +     +      Y ++    V   ++
Sbjct: 288 KGFYIIKVILISPYTQFAISTVISIVA 314



 Score = 48.5 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 76/265 (28%), Gaps = 52/265 (19%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VPVL+  +        I +  A G SL     TS  S   + +    N+++       
Sbjct: 40  VLVPVLTLFY-------GIPIIYATGASLISTIATSAGSASAYAKEKIANIRLGVGLEVA 92

Query: 107 LPITTVVTSLMISHVDKSFLNK----AFAIFCLLMGILMLKRDRLYCERKFPDNYVKY-- 160
                +V SL    +    L+      F    L   +  ++R +    +    ++     
Sbjct: 93  TTTGAIVGSLTAVFIYDHHLSWLIYVIFGFVLLGSLVPTIQRGKYEIPKMLKPDWTTRVF 152

Query: 161 --------------------------IWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
                                     I     G +SG LG+G G    L M +     + 
Sbjct: 153 QLSGSYYDARLHKNVEYSGVRWWLGEIIMFFAGMISGLLGIGSGALKVLGMDWAINLPMK 212

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
             T +S  +  + A     +             W  G++            ++   L  K
Sbjct: 213 VTTTSSNFMIGITAATGSSIY------------WYAGYIQPFIAAATAIGVLIGAFLGAK 260

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVF 278
           +   I  + +   F  I+       
Sbjct: 261 ILVRITNRSIRWIFFAILMFLGIQM 285


>gi|227535827|ref|ZP_03965876.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227244315|gb|EEI94330.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 108

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 7/110 (6%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
           ++GL G GGG +++P L    +L        M  A+GTSL +I+  S+M F+    H ++
Sbjct: 2   ITGLIGAGGGFLIIPALVNLLKL-------PMKTAVGTSLVIISINSLMGFLFSLPHTSV 54

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
               L     +  I  ++ S + + +  S L  AF  F L+MGI ++ ++
Sbjct: 55  QWGFLLSIASIAIIGILIGSYLSTKIKASKLKPAFGWFVLVMGIYIIVKE 104


>gi|213968697|ref|ZP_03396839.1| hypothetical protein PSPTOT1_1005 [Pseudomonas syringae pv. tomato
           T1]
 gi|213926630|gb|EEB60183.1| hypothetical protein PSPTOT1_1005 [Pseudomonas syringae pv. tomato
           T1]
          Length = 235

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 87/229 (37%), Gaps = 16/229 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++     I    I   +T
Sbjct: 16  AIPALGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALMLIIPSFIFAWLT 75

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGI----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           S++   +D   +   F  F +++ +     M  R+ L   R   + Y+  +         
Sbjct: 76  SMLAVRIDPQSMRLGFVAFLVILTVFNVAQMYWRNTLASGRLRHEKYLWLLGVGSGVTGG 135

Query: 171 GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
                GG + T +L   +GA+   A   +  ++A              + L+    WS+G
Sbjct: 136 LFGVGGGVVATPILTSVFGATQVVAQGLALSLAAP-----STGITLVTYALHDHVNWSMG 190

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                  + +    +       KL++ + ++ L + F + +   + + A
Sbjct: 191 -------IPLAIGGLASISWGVKLAHSLPERTLRLMFCVFLVLCAVILA 232



 Score = 35.4 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 38/95 (40%), Gaps = 7/95 (7%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L+  F    +       VA G +L + AP++ ++ + +  H  +N  +          
Sbjct: 147 PILTSVFGATQV-------VAQGLALSLAAPSTGITLVTYALHDHVNWSMGIPLAIGGLA 199

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +      +   + +  L   F +F +L  +++  +
Sbjct: 200 SISWGVKLAHSLPERTLRLMFCVFLVLCAVILALK 234


>gi|258620888|ref|ZP_05715922.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258623842|ref|ZP_05718796.1| UPF0721 transmembrane protein [Vibrio mimicus VM603]
 gi|262170663|ref|ZP_06038341.1| hypothetical protein VII_001475 [Vibrio mimicus MB-451]
 gi|258583831|gb|EEW08626.1| UPF0721 transmembrane protein [Vibrio mimicus VM603]
 gi|258586276|gb|EEW10991.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|261891739|gb|EEY37725.1| hypothetical protein VII_001475 [Vibrio mimicus MB-451]
          Length = 261

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 69/189 (36%), Gaps = 16/189 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  + +   R G +++K ++  I    +   + +  + ++D + L   
Sbjct: 46  ALATNKLQSSFGSFSATLYFVRKGVVSLKAMRLAIACTFVGAALGAEAVQYIDATLLTSL 105

Query: 130 FAIFCLLMGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             I  L + +  L               +    +  G   GF  G  G G G IFT   +
Sbjct: 106 IPILLLGISLYFLLAPTTKTHSGPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                S+ +ATA +  ++      AL   + +G     LP W +G       L +     
Sbjct: 166 ALGHFSLVEATARTKVLNFTSNIAALTFFLIAG-----LPIWEIG-------LTMAVGGF 213

Query: 246 LITPLATKL 254
           +   +  K+
Sbjct: 214 IGARMGAKV 222


>gi|145514235|ref|XP_001443028.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124410389|emb|CAK75631.1| unnamed protein product [Paramecium tetraurelia]
          Length = 473

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 50/133 (37%), Gaps = 11/133 (8%)

Query: 7   NFSLMVFLSKD---CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD 63
            F+ + FL K+     +     I    F++G +SG  G+G G VMVP L           
Sbjct: 315 QFNQINFLPKERYFTPISRFFKIYAGGFMAGFVSGFLGMGAGFVMVPTLLY--------S 366

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            +    A  TS  +    S+ + +    +  ++ + +  +  +  I   V + +   +  
Sbjct: 367 GLIPRCASATSAFIYLMISLNNLITLLTNHYLDWQTIILFTGLAIIGGSVFAKIGYILLG 426

Query: 124 SFLNKAFAIFCLL 136
            +    F I  + 
Sbjct: 427 KYKIGYFVILIVF 439



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGV 175
           L++++V   +L   F          +    +          +  Y  G + GF+SG LG+
Sbjct: 294 LIVANVLYDYLIWQFGTSQEKQFNQINFLPKERYFTPISRFFKIYAGGFMAGFVSGFLGM 353

Query: 176 GGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           G G      +L+ G     A+ATSA +  +I+   L+  + +             +++  
Sbjct: 354 GAGFVMVPTLLYSGLIPRCASATSAFIYLMISLNNLITLLTNH------------YLDWQ 401

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +++   ++I+   +  K+ Y++  KY  IG+ +I+       A
Sbjct: 402 TIILFTGLAIIGGSVFAKIGYILLGKY-KIGYFVILIVFCLDIA 444


>gi|257879640|ref|ZP_05659293.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257813868|gb|EEV42626.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
          Length = 275

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 24/252 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  V   L+ T+  + G+GGG+++ P+L        I       ++  +++ V   + V
Sbjct: 1   MIYFVVIVLANTVGAISGMGGGVLIKPILDL------IGAHSVAGISFYSTVAVFTMSIV 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------LNKAFAIFCLL 136
            +  +     ++N +I+        +  VV +++     + F       L + F     L
Sbjct: 55  STVRQVSSGKSLNWQIVGWVSSGAVVGGVVGNIVFEVFLQLFENEKHVQLIQIFLTVLTL 114

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           +            +          I G V GFL+  LG+GGG     LLML +   I +A
Sbjct: 115 V-FAFFYTKHHQPKFHLTSWTWYLICGGVLGFLASFLGIGGGPVNVSLLMLMFALPIKEA 173

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           T  S           L+    +          S    ++  +  ++P +++      + S
Sbjct: 174 TLYSLSTIFFSQLAKLVTIALTS---------SFMRFDLSMLFYVIPAAVIGGLWGARFS 224

Query: 256 YMIGKKYLTIGF 267
            ++  K +T  F
Sbjct: 225 RVLSPKKVTFIF 236


>gi|256828130|ref|YP_003156858.1| hypothetical protein Dbac_0315 [Desulfomicrobium baculatum DSM
           4028]
 gi|256577306|gb|ACU88442.1| protein of unknown function DUF81 [Desulfomicrobium baculatum DSM
           4028]
          Length = 415

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 101/292 (34%), Gaps = 68/292 (23%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I     +G +SG  G GGG ++ P L        +   +   +A+GT L  I   ++M  
Sbjct: 75  IFVGVGAGLISGCIGAGGGFIIAPAL--------MSAGVKGILAVGTDLFHIFAKAIMGS 126

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTS-------LMISHVDKSFLNKAFAIFCLLMGI 139
           + HR+ G +++ +   ++    I T V +        +   +  +F+   + +    +G 
Sbjct: 127 VLHRKMGNVSVPLAFVFLIGAIIGTTVGAGINRALYNINPVLSDAFITTVYTVMLGFLGF 186

Query: 140 L-------------------------MLKRDRLYCERKFP----------------DNYV 158
                                     M    +       P                    
Sbjct: 187 YGMYDYWSAKKAGHSGGAHDTSEGTGMTGIAKKLQSVNLPPMVSFDQGLIPGGRKISWIF 246

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             + G++ G  +G +GVGGG  T  + ++             GVS+L      + +I   
Sbjct: 247 LVLSGILVGMAAGIMGVGGGFLTFPIFVYI-----------LGVSSLTTVGTDIFQIVFT 295

Query: 219 WGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            G   +  +++ GF+     + +L  S++   +   ++ ++    +   F++
Sbjct: 296 AGYGAITQYAIYGFIFYTLAMGMLLGSLIGIQVGALVTKVVPGITIRGFFAL 347



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 44/121 (36%), Gaps = 8/121 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++++  L G  +G+ GVGGG +  P+      +  +         +GT +  I  T+ 
Sbjct: 245 IFLVLSGILVGMAAGIMGVGGGFLTFPIFVYILGVSSLTT-------VGTDIFQIVFTAG 297

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              +     +G I   +    +    I   V +L+   V    +   FA+  +   +   
Sbjct: 298 YGAITQYAIYGFIFYTLAMGMLLGSLIGIQVGALVTKVVPGITIRGFFALSVMAGFVNRF 357

Query: 143 K 143
            
Sbjct: 358 F 358


>gi|302061482|ref|ZP_07253023.1| hypothetical protein PsyrptK_15965 [Pseudomonas syringae pv. tomato
           K40]
          Length = 255

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 87/229 (37%), Gaps = 16/229 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++     I    I   +T
Sbjct: 36  AIPALGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALMLIIPSFIFAWLT 95

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGI----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           S++   +D   +   F  F +++ +     M  R+ L   R   + Y+  +         
Sbjct: 96  SMLAVRIDPQSMRLGFVAFLVILTVFNVAQMYWRNTLASGRLRHEKYLWLLGVGSGVTGG 155

Query: 171 GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
                GG + T +L   +GA+   A   +  ++A              + L+    WS+G
Sbjct: 156 LFGVGGGVVATPILTSVFGATQVVAQGLALSLAAP-----STGITLVTYALHDHVNWSMG 210

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                  + +    +       KL++ + ++ L + F + +   + + A
Sbjct: 211 -------IPLAIGGLASISWGVKLAHSLPERTLRLMFCVFLVLCAVILA 252



 Score = 35.4 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 38/95 (40%), Gaps = 7/95 (7%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L+  F    +       VA G +L + AP++ ++ + +  H  +N  +          
Sbjct: 167 PILTSVFGATQV-------VAQGLALSLAAPSTGITLVTYALHDHVNWSMGIPLAIGGLA 219

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +      +   + +  L   F +F +L  +++  +
Sbjct: 220 SISWGVKLAHSLPERTLRLMFCVFLVLCAVILALK 254


>gi|300702493|ref|YP_003744093.1| hypothetical protein RCFBP_10128 [Ralstonia solanacearum CFBP2957]
 gi|299070154|emb|CBJ41444.1| conserved membrane protein of unknown function, DUF81 [Ralstonia
           solanacearum CFBP2957]
          Length = 252

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 90/244 (36%), Gaps = 26/244 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS-LGVIAPTSVMSFMEHRRHGTINMKILK 101
           GGGLV +P L  A+       ++     +GT+ L  ++ T+  +   + R   I      
Sbjct: 22  GGGLVQIPALFSAY------PNLAPATLIGTNKLASMSGTATAAVR-YGRTVRIYWGATA 74

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP-----DN 156
             +    + +++ +  ++H+    L +A     +L+    + +  L  E         + 
Sbjct: 75  PAMVTAFLCSLLGAWALTHIPAEPLRRALPFVLVLLLAYTVAKKDLGAEHAPSLSGWRER 134

Query: 157 YVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
               + G V GF  G  G G G     + +  +G     A+A++  V+      ALL+  
Sbjct: 135 ATALLAGAVLGFYDGVFGPGTGSFLMIVFVRVFGYDFLHASASTKIVNLATNVAALLLLA 194

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                         G V     L++   ++L     + L+   G +++   F +++    
Sbjct: 195 AK------------GHVWWQLGLVMAVANVLGNQAGSYLALKHGSRFVRKVFIVVVLALI 242

Query: 276 FVFA 279
              A
Sbjct: 243 LKTA 246


>gi|156743559|ref|YP_001433688.1| hypothetical protein Rcas_3621 [Roseiflexus castenholzii DSM 13941]
 gi|156234887|gb|ABU59670.1| protein of unknown function DUF81 [Roseiflexus castenholzii DSM
           13941]
          Length = 251

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 59/183 (32%), Gaps = 11/183 (6%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           G+ G+G   +  P L       G+      H  M  SL +   T++   +   R G ++ 
Sbjct: 18  GMMGLGVAFIATPTL-------GLFGLDLKHEIMPLSLWLNGITAITGAITLARKGMVDW 70

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP--- 154
           +     + +  +   +   ++  V  + +   +      +   M                
Sbjct: 71  RTALPLLAITTLVAPIGVWLLQFVSTTTIWWIYVGVLFFLAYRMAFPPPQDDSAPRSIGD 130

Query: 155 -DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
                        G  +G LGVG G      ++  G +   A AT+A +  L +F A   
Sbjct: 131 DVRVKAGAASAAIGVFAGFLGVGPGFLMMPTLVLLGYNARIAAATNAVIVTLPSFSAFAA 190

Query: 214 RIY 216
            + 
Sbjct: 191 HLI 193



 Score = 38.9 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 9/114 (7%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
            AS   G  +G  GVG G +M+P L                +A  T+  ++   S  +F 
Sbjct: 138 AASAAIGVFAGFLGVGPGFLMMPTLVLL--------GYNARIAAATNAVIVTLPSFSAFA 189

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMGIL 140
            H      +  +L        I     +  M   V    L + FA   +L+ + 
Sbjct: 190 AHLIDARFDWLLLGLTSVSAIIGAQSGAAFMARRVKSLTLTRIFAAALVLLALQ 243


>gi|69245145|ref|ZP_00603269.1| Protein of unknown function DUF81 [Enterococcus faecium DO]
 gi|258616750|ref|ZP_05714520.1| hypothetical protein EfaeD_13687 [Enterococcus faecium DO]
 gi|68195988|gb|EAN10421.1| Protein of unknown function DUF81 [Enterococcus faecium DO]
          Length = 278

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 93/253 (36%), Gaps = 26/253 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  V   L+ T+  + G+GGG+++ P+L        I       ++  +++ V   + V
Sbjct: 4   LIYFVVIVLANTVGAISGMGGGVLIKPILDL------IGAHSIAGISFYSTVAVFTMSIV 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------LNKAFAIFCLL 136
            +  +     ++N +I+        +  +  +++     + F       L + F     L
Sbjct: 58  STVRQVSSGKSLNWQIVGWVSGGAVVGGIAGNIVFEVFLRLFENEKHVQLIQIFLTVLTL 117

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           +            +          I G + GFL+  LG+GGG     LLML +   I +A
Sbjct: 118 V-FAFFYTKHHQPKFHLTSWIWYLICGGILGFLASFLGIGGGPINVSLLMLMFALPIKEA 176

Query: 196 TATSAGVSALIAFPALLV-RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           T  S           L+   + SG+    L            +  I+P +++      K 
Sbjct: 177 TLYSLSTIFFSQLAKLVTIALTSGFMRFDLS----------MLFYIIPAAVIGGLWGAKF 226

Query: 255 SYMIGKKYLTIGF 267
           S ++  K +T  F
Sbjct: 227 SRILSPKKVTFIF 239


>gi|317008876|gb|ADU79456.1| hypothetical protein HPIN_00995 [Helicobacter pylori India7]
          Length = 277

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 74/215 (34%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G ++++          +  ++ S ++  ++   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLREGSFAALGGLMGAILGSFILKIINDKILMSVFVVVVCYTFIKYAFS 119

Query: 145 DRLYCE-------------------RKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
                E                   R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 SNKKPEHFEEMHFDLHANNKTPEKKRAIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|265998963|ref|ZP_06111506.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|263091421|gb|EEZ15957.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
          Length = 167

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 7/122 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + L +   + +G +S L G+G G++ +P +  A +L        + V+   S  +I 
Sbjct: 42  VGSLPLGLSLMYGAGLVSALLGIGSGVLKIPAMDTALRL-------PIKVSSAASNFMIG 94

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T   S   +   G IN  I         +  V  + +++ +    L   F I  +L+ I
Sbjct: 95  VTGAASAGAYFMRGDINTAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAI 154

Query: 140 LM 141
            M
Sbjct: 155 AM 156



 Score = 38.5 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 36/115 (31%), Gaps = 13/115 (11%)

Query: 165 VTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
             G +S  LG+G G+     M       I  ++A S  +  +    +             
Sbjct: 54  GAGLVSALLGIGSGVLKIPAMDTALRLPIKVSSAASNFMIGVTGAASAGAY--------- 104

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              +  G +N      +   S+L      ++   I    L I F +++   +   
Sbjct: 105 ---FMRGDINTAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAIAM 156


>gi|229548378|ref|ZP_04437103.1| membrane protein [Enterococcus faecalis ATCC 29200]
 gi|255971007|ref|ZP_05421593.1| predicted protein [Enterococcus faecalis T1]
 gi|256617372|ref|ZP_05474218.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|257420733|ref|ZP_05597723.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|229306594|gb|EEN72590.1| membrane protein [Enterococcus faecalis ATCC 29200]
 gi|255962025|gb|EET94501.1| predicted protein [Enterococcus faecalis T1]
 gi|256596899|gb|EEU16075.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|257162557|gb|EEU92517.1| conserved hypothetical protein [Enterococcus faecalis X98]
          Length = 259

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 104/264 (39%), Gaps = 26/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  FLS T+  L G+GGG+++ PVL                +A  +S+ V  
Sbjct: 1   MRVLLIYFITIFLSNTVGALSGMGGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFV 54

Query: 80  PTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAI 132
             S+ S  +  ++G  I  K      F   +  ++  L+++        ++      + I
Sbjct: 55  M-SISSTYKQYQNGVQIEWKKAASISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYII 113

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGAS 191
             L + +++L               +  I G+  G LS  LG+GGG      L+LF+G  
Sbjct: 114 MLLTLVLVLLYNQFSNWHLHLNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMD 173

Query: 192 IYKATATSAGVSALIAFPALL-VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           I  AT  S           L  + + +G+ +            +  +L I+P ++    +
Sbjct: 174 IKSATVYSIITIFFSQLAKLGNIGLTTGFAVFD----------LTMLLAIIPAALFGGYV 223

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTT 274
               S  + ++ +   +S+++F  
Sbjct: 224 GGLFSKKLSQQRVAQIYSLVVFLV 247


>gi|56477027|ref|YP_158616.1| hypothetical protein ebA2834 [Aromatoleum aromaticum EbN1]
 gi|56313070|emb|CAI07715.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 256

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 84/252 (33%), Gaps = 24/252 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             +  + +A+FL+G +  + G GGGLV +P L  AF       +       GT+      
Sbjct: 6   TLLFFLGLAAFLAGFVDAVVG-GGGLVQIPALFTAF------PASLPATLFGTNKLASIV 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  + +++ R   I  ++               +  ++++  + L     +  +L+ I 
Sbjct: 59  GTSSAAIQYARRVAIPWRVALPAAASALAGAWFGARAVAYLSPTALKPVILLLLILVAIY 118

Query: 141 MLKRDRL----YCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
              R                    + G   GF  G  G G G     L + F      +A
Sbjct: 119 TFIRKDFGTANATAEPLHATAPALLIGASVGFYDGFFGPGTGSFLIFLFVRFLAMDFLRA 178

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           + T+  V+      A+                    +   A  ++   +++   + ++L+
Sbjct: 179 SVTAKIVNVATNLAAIAFFTSHV------------AILWQAAGVMACSNLVGALVGSRLA 226

Query: 256 YMIGKKYLTIGF 267
              G  ++   F
Sbjct: 227 LRHGAGFVRKMF 238


>gi|284043886|ref|YP_003394226.1| hypothetical protein Cwoe_2428 [Conexibacter woesei DSM 14684]
 gi|283948107|gb|ADB50851.1| protein of unknown function DUF81 [Conexibacter woesei DSM 14684]
          Length = 263

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 61/191 (31%), Gaps = 17/191 (8%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           G  G GG ++ VP+L              +  A   SL V+A  ++     H R G +  
Sbjct: 17  GTLGGGGSVLAVPLLVYVL-------GQPVQEATTASLVVVAAGALTGVFGHARAGRVCW 69

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE------- 150
           +             V  +++   +    L  AFA+  L+  + + +              
Sbjct: 70  RHAAVLTLAALPGIVAGTILSEAISGRALMGAFAVLMLVAAVAIWRTAGGRRAAAGDCAL 129

Query: 151 ---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
                     V +    +          GG +    L++    ++  A  TS  + A  +
Sbjct: 130 PVCPPLRLPLVPFTGAGIGLLTGFLGIGGGFLIVPTLVMALALAMRLAVGTSLAIVAATS 189

Query: 208 FPALLVRIYSG 218
              L+  + +G
Sbjct: 190 VIGLMTHLGAG 200


>gi|330835392|ref|YP_004410120.1| hypothetical protein Mcup_1533 [Metallosphaera cuprina Ar-4]
 gi|329567531|gb|AEB95636.1| conserved hypothetical protein [Metallosphaera cuprina Ar-4]
          Length = 253

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 84/264 (31%), Gaps = 52/264 (19%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           MVP+L+           I +  A G+SL     TS  S   + +    +++I        
Sbjct: 1   MVPILTLYL-------GIPIIYATGSSLISTIATSSGSASAYVKERITSVRIGISLEIAT 53

Query: 108 PITTVVTSLMISHVDKSFLN----KAFAIFCLLMGILMLKRDRLYCERKFP--------- 154
              ++V SL ++++    L       F I  L      LK+ +       P         
Sbjct: 54  TAGSIVGSLTVAYIYSLRLQYLVYIIFGIVLLFSIYPTLKKMKGEFPTPKPPDWTTKALN 113

Query: 155 -------------------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYK 194
                                ++  I     GF+SG LG+G G    + M +     +  
Sbjct: 114 LYGEYFDPANNTTVKYWGVRWWLGLIVMFFAGFISGLLGIGSGALKVIGMDYAMNLPMKV 173

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            T TS  +  + A     +             W+LG++            ++ + + T++
Sbjct: 174 TTTTSNFMIGVTAATGSGIY------------WALGYIQPFLAAPTAIGVLMGSLIGTRV 221

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
              +  K +   F +I+       
Sbjct: 222 LVRMKNKRIRAVFLIILGFLGVQM 245



 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 49/121 (40%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++  F +G +SGL G+G G + V         M    ++ M V   TS  +I  T+ 
Sbjct: 135 WLGLIVMFFAGFISGLLGIGSGALKV-------IGMDYAMNLPMKVTTTTSNFMIGVTAA 187

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +   G I   +       + + +++ + ++  +    +   F I    +G+ M+ 
Sbjct: 188 TGSGIYWALGYIQPFLAAPTAIGVLMGSLIGTRVLVRMKNKRIRAVFLIILGFLGVQMIL 247

Query: 144 R 144
           R
Sbjct: 248 R 248


>gi|314923908|gb|EFS87739.1| integral membrane family protein [Propionibacterium acnes HL001PA1]
 gi|314966032|gb|EFT10131.1| integral membrane family protein [Propionibacterium acnes HL082PA2]
 gi|314981917|gb|EFT26010.1| integral membrane family protein [Propionibacterium acnes HL110PA3]
 gi|315090732|gb|EFT62708.1| integral membrane family protein [Propionibacterium acnes HL110PA4]
 gi|315094980|gb|EFT66956.1| integral membrane family protein [Propionibacterium acnes HL060PA1]
 gi|315104205|gb|EFT76181.1| integral membrane family protein [Propionibacterium acnes HL050PA2]
 gi|327328085|gb|EGE69854.1| putative integral membrane protein [Propionibacterium acnes
           HL103PA1]
          Length = 241

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 88/240 (36%), Gaps = 21/240 (8%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+M+P L     L+G+     +   +GT+       ++ + + + R    + ++   
Sbjct: 11  GGGLIMLPSL-----LVGLPTETPVATIVGTNKVAQVVGNLTAGVGYLRKQRPDWRMFLW 65

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD---NYVK 159
              +  +  V+ + +++++ ++       +  + +GI   +R  L             + 
Sbjct: 66  TAVLAGLGAVLGARIVTYMSRAVYTPILLVVLVTIGIYTWRRPSLGAGHNGEGGKHPILV 125

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
            I G+  G   GA+G G G F  L  +   G S  KA+  +   +A+     +       
Sbjct: 126 PIIGLFLGCYDGAIGPGVGTFWVLTYVAVGGYSFLKASGMAKICNAVTNLVTITTLAIH- 184

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                      G V       ++  ++L   +  + +   G  ++   F ++    +   
Sbjct: 185 -----------GHVWWHIAWPLVISNVLGGLIGARTAMKHGNGFVRTMFLIVTSVLAVRM 233


>gi|293560100|ref|ZP_06676604.1| hypothetical protein EfmE1162_0759 [Enterococcus faecium E1162]
 gi|314938162|ref|ZP_07845467.1| conserved hypothetical protein [Enterococcus faecium TX0133a04]
 gi|314943796|ref|ZP_07850531.1| conserved hypothetical protein [Enterococcus faecium TX0133C]
 gi|314949755|ref|ZP_07853065.1| conserved hypothetical protein [Enterococcus faecium TX0082]
 gi|314951164|ref|ZP_07854222.1| conserved hypothetical protein [Enterococcus faecium TX0133A]
 gi|314994598|ref|ZP_07859858.1| conserved hypothetical protein [Enterococcus faecium TX0133B]
 gi|314995591|ref|ZP_07860685.1| conserved hypothetical protein [Enterococcus faecium TX0133a01]
 gi|291605967|gb|EFF35397.1| hypothetical protein EfmE1162_0759 [Enterococcus faecium E1162]
 gi|313590179|gb|EFR69024.1| conserved hypothetical protein [Enterococcus faecium TX0133a01]
 gi|313591003|gb|EFR69848.1| conserved hypothetical protein [Enterococcus faecium TX0133B]
 gi|313596643|gb|EFR75488.1| conserved hypothetical protein [Enterococcus faecium TX0133A]
 gi|313597520|gb|EFR76365.1| conserved hypothetical protein [Enterococcus faecium TX0133C]
 gi|313642509|gb|EFS07089.1| conserved hypothetical protein [Enterococcus faecium TX0133a04]
 gi|313643828|gb|EFS08408.1| conserved hypothetical protein [Enterococcus faecium TX0082]
          Length = 278

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 24/252 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  V   L+ T+  + G+GGG+++ P+L        I       ++  +++ V   + V
Sbjct: 4   LIYFVVIVLANTVGAISGMGGGVLIKPILDL------IGAHSVAGISFYSTVAVFTMSIV 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------LNKAFAIFCLL 136
            +  +     ++N +I+        +  VV +++     + F       L + F     L
Sbjct: 58  STVRQVSSGKSLNWQIVGWVSSGAVVGGVVGNIVFEVFLQLFENEKHVQLIQIFLTVLTL 117

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           +            +          I G V GFL+  LG+GGG     LLML +   I +A
Sbjct: 118 V-FAFFYTKHHQPKFHLTSWTWYLICGGVLGFLASFLGIGGGPVNVSLLMLMFALPIKEA 176

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           T  S           L+    +          S    ++  +  ++P +++      + S
Sbjct: 177 TLYSLSTIFFSQLAKLVTIALTS---------SFMRFDLSMLFYVIPAAVIGGLWGARFS 227

Query: 256 YMIGKKYLTIGF 267
            ++  K +T  F
Sbjct: 228 RVLSPKKVTFIF 239


>gi|315504680|ref|YP_004083567.1| hypothetical protein ML5_3905 [Micromonospora sp. L5]
 gi|315411299|gb|ADU09416.1| protein of unknown function DUF81 [Micromonospora sp. L5]
          Length = 353

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 68/204 (33%), Gaps = 14/204 (6%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T++ + + H R G ++ +++        I     +  +S +         A     +G
Sbjct: 52  IGTTLAAGVSHWRFGNVDWRVVGRIALPGAIGAFAGATFLSSISTEAAAPWMAAILFTLG 111

Query: 139 ILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIY 193
             +L R     R         +      G+V GF+    G G G      +L  G     
Sbjct: 112 AYLLVRFSRPLRANRAAGRLRSRFLAPLGLVAGFVDATGGGGWGPVATPALLVSGRMEPR 171

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           K   +      ++A  A +  +            S GF+ +  V  +L   ++  P+A  
Sbjct: 172 KVIGSVDTSEFVVAGAASIGFLIG--------LGSEGFL-LPTVAALLVGGLIAAPIAAW 222

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           L  ++  + L      ++  T+  
Sbjct: 223 LVRIVPAQLLGAVIGGVIVLTNAR 246


>gi|242310099|ref|ZP_04809254.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
 gi|239523396|gb|EEQ63262.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
          Length = 234

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 84/248 (33%), Gaps = 24/248 (9%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
            G +  + G GGG + +P L            I    A+ T+       S  +     + 
Sbjct: 2   GGFIDSIAG-GGGSITLPALLL--------SGISPLEALATNKLQGVFGSFSATRLFYKK 52

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           G IN+K    +  +    + + ++ +  ++  FL+K    F +L G   L   ++  E++
Sbjct: 53  GYINLKKCLPFAILAFAFSALGTISVQFINSDFLSKFLPFFIILFGFYFLFSPKIKEEQR 112

Query: 153 FPD--NYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
                           GF  G LG G G      L++  G  +  A   +   +      
Sbjct: 113 ATRFHKAYFLFALAGIGFYDGFLGPGTGSFLLLALIVLAGYGLTNALGEAKLYNFATNLA 172

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           +++     G  L G+             L++     +   L ++ +   G K +     +
Sbjct: 173 SVIFFAIGGNMLFGVG------------LMMALGQFIGANLGSRAAIRYGIKIIKPLIVI 220

Query: 270 IMFTTSFV 277
           + F  +  
Sbjct: 221 VSFAMAAK 228


>gi|296445513|ref|ZP_06887469.1| protein of unknown function DUF81 [Methylosinus trichosporium OB3b]
 gi|296256918|gb|EFH03989.1| protein of unknown function DUF81 [Methylosinus trichosporium OB3b]
          Length = 258

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 55/272 (20%), Positives = 98/272 (36%), Gaps = 36/272 (13%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L  VA+ + G + GL GVGGG +M P+L  AF        +    A+GT L   A T   
Sbjct: 5   LYSVAALIVGVIVGLTGVGGGALMTPLLVLAF-------GVAPTTAVGTDLLCAAITKSS 57

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + H  +GT++ +I +         T+VT   +S       + + ++    +G  ++  
Sbjct: 58  GTLVHVCNGTVDWRITRRLACGSVPATLVTLAALSWFAGRTGDASNSVVTGALGFALVLT 117

Query: 145 DRLYCERKFPDNYV---------------KYIWGMVTGFLSGALGVGGGI--FTNLLMLF 187
                 R    +Y+                 + G V G L     VG G      LL L+
Sbjct: 118 AVALLLRGRIVDYLIGRANGLGDRQIMMVTVLLGAVLGALVSISSVGAGAVGMVVLLSLY 177

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
             A   +   +    +  +              L G   W +G V+   +  +L  SI  
Sbjct: 178 PQAPAARLVGSDIAHAVPLTL------------LAGGGHWLIGGVDWSLLGALLIGSIPG 225

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             + + L+  +  ++L    + +M       +
Sbjct: 226 VAVGSFLAPRVPDRHLRSALATVMAVVGVRLS 257



 Score = 36.6 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 44/121 (36%), Gaps = 6/121 (4%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + + ++   + G L  +  VG G V + VL   +              +G+ +    P
Sbjct: 142 QIMMVTVLLGAVLGALVSISSVGAGAVGMVVLLSLY------PQAPAARLVGSDIAHAVP 195

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            ++++   H   G ++  +L   +        V S +   V    L  A A    ++G+ 
Sbjct: 196 LTLLAGGGHWLIGGVDWSLLGALLIGSIPGVAVGSFLAPRVPDRHLRSALATVMAVVGVR 255

Query: 141 M 141
           +
Sbjct: 256 L 256


>gi|291563589|emb|CBL42405.1| Predicted permeases [butyrate-producing bacterium SS3/4]
          Length = 252

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 77/206 (37%), Gaps = 16/206 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +  +    F++G +  + G GGGL+ +P              + ++   G +    A
Sbjct: 4   IHNLIWLCPLLFIAGFIDSIAG-GGGLIALPAYMMC--------GMPIYYVYGCNKFQCA 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S ++  ++ ++G +++KI         + +++ + +I ++ +  +     +   L  +
Sbjct: 55  FGSTVAAWKYFKNGCLDLKITLISAVTSFLCSMLGTRIIFYLKEEQIRSMLMVLLPLTAV 114

Query: 140 LMLKRDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASI 192
           L++                 P+       GM  G      G GGG    LL  F     +
Sbjct: 115 LVIFMKNAWNYTDTKKPLILPNVLRALFIGMTIGLYDSLYGPGGGTIAMLLFTFLLKYDV 174

Query: 193 YKATATSAGVSALIAFPALLVRIYSG 218
             A+  +     +  + ALL  I SG
Sbjct: 175 RTASGNAKLTLIVSNYTALLSYILSG 200


>gi|109947986|ref|YP_665214.1| hypothetical protein Hac_1493 [Helicobacter acinonychis str.
           Sheeba]
 gi|109715207|emb|CAK00215.1| conserved hypothetical protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 277

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 73/215 (33%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G +++K          +  V+ S ++  +D   L   F +      I     
Sbjct: 60  GSVINYKKGLLDLKEGLFAALGGLMGAVLGSFILKIIDDKILMSVFVVVVCYTFIKYAFS 119

Query: 145 -------------------DRLYCERKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
                                   +   P       + +  + G +TG  S  LG+GGGI
Sbjct: 120 SNKQPKHFEEMHFALHANDKTPEKKHTLPFVSMDKTHGILMLAGFITGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|302868851|ref|YP_003837488.1| hypothetical protein Micau_4399 [Micromonospora aurantiaca ATCC
           27029]
 gi|302571710|gb|ADL47912.1| protein of unknown function DUF81 [Micromonospora aurantiaca ATCC
           27029]
          Length = 347

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 68/204 (33%), Gaps = 14/204 (6%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T++ + + H R G ++ +++        I     +  +S +         A     +G
Sbjct: 52  IGTTLAAGVSHWRFGNVDWRVVGRIALPGAIGAFAGATFLSSISTEAAAPWMAAILFTLG 111

Query: 139 ILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIY 193
             +L R     R         +      G+V GF+    G G G      +L  G     
Sbjct: 112 AYLLVRFSRPLRANRAAGRLRSRFLAPLGLVAGFVDATGGGGWGPVATPALLVSGRMEPR 171

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           K   +      ++A  A +  +            S GF+ +  V  +L   ++  P+A  
Sbjct: 172 KVIGSVDTSEFVVAGAASIGFLIG--------LGSEGFL-LPTVAALLVGGLIAAPIAAW 222

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           L  ++  + L      ++  T+  
Sbjct: 223 LVRIVPAQLLGAVIGGVIVLTNAR 246


>gi|73542382|ref|YP_296902.1| hypothetical protein Reut_A2697 [Ralstonia eutropha JMP134]
 gi|72119795|gb|AAZ62058.1| Protein of unknown function DUF81 [Ralstonia eutropha JMP134]
          Length = 257

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 80/247 (32%), Gaps = 36/247 (14%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L+  F   G   +     A+GT L   A T     + HR HG +  ++++      
Sbjct: 27  MTPLLTLLF---GFSPA----TAVGTDLAFAAITKGFGTIAHRAHGHVQWQVVRRLCIGS 79

Query: 108 PITTVVTSLM---ISHVDKSFLNKAFAIFCLLMGI---------LMLKRDRLYCERKFPD 155
               V   L+      ++  +L+       + + +          ML         +   
Sbjct: 80  LPAAVAAILVLKNAGELNAQWLHVIRVTIGVSVLLTVLSLLFRKQMLAWLERNPRFQLHG 139

Query: 156 NY---VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA--TATSAGVSALIAFPA 210
                   + G V G L     +G G     L+L     +  A    T    +  +   A
Sbjct: 140 RAQVIATIVVGAVIGVLVTVSSIGAGAVGATLILLLYPQMKPAEVAGTDIAYAVPLTALA 199

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            L  ++            LG V+   +L +L  SI    L  +LS  + ++ +    +  
Sbjct: 200 GLGHVW------------LGTVDWNLLLSLLVGSIPGIWLGAQLSRALPERLVRAALATT 247

Query: 271 MFTTSFV 277
           +   +  
Sbjct: 248 LTLVAIK 254



 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 45/120 (37%), Gaps = 6/120 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +   IV   + G L  +  +G G V   ++   +  M   +        GT +    P +
Sbjct: 143 VIATIVVGAVIGVLVTVSSIGAGAVGATLILLLYPQMKPAEVA------GTDIAYAVPLT 196

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++ + H   GT++  +L   +        + + +   + +  +  A A    L+ I ++
Sbjct: 197 ALAGLGHVWLGTVDWNLLLSLLVGSIPGIWLGAQLSRALPERLVRAALATTLTLVAIKLV 256


>gi|253746884|gb|EET01870.1| Hypothetical protein GL50581_856 [Giardia intestinalis ATCC 50581]
          Length = 511

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 57/150 (38%), Gaps = 18/150 (12%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +    I+A   +G L  + G+GGGL+  P+L       GI+       A   S  +IA
Sbjct: 369 ILFYVKFILAGLFAGILGAMLGIGGGLLKNPILI----SFGIEPER----ARTASTVMIA 420

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPI----TTVVTSLMI------SHVDKSFLNKA 129
            TS+ S + +   G ++ +     + V+ +       ++ L++      S +        
Sbjct: 421 FTSMSSMISYVVIGGLHFEYAWPLMLVIGVFFVSGYYLSGLIMRCFKTKSFIPFIITALI 480

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVK 159
               C ++  +++    +    + P     
Sbjct: 481 IVCTCFIVANMIIVFVDIAKTGQLPGFAGL 510



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 29/59 (49%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            + G+  G L   LG+GGG+  N +++ +G    +A   S  + A  +  +++  +  G
Sbjct: 376 ILAGLFAGILGAMLGIGGGLLKNPILISFGIEPERARTASTVMIAFTSMSSMISYVVIG 434



 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 39/101 (38%), Gaps = 4/101 (3%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            I   +   L+ A G+GGG+    ++  +G S + A   S  +    +     + I+   
Sbjct: 19  AIVCALFAMLASAAGIGGGVIFVSMLQLFGVSPHVAAPLSKAMIFGGSCVLTCMTIFQHE 78

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
             +   P     +    V II P ++    +   ++ ++ +
Sbjct: 79  DNDPTKP----AIIWDLVFIIEPAAVSGALIGALINVVLPE 115



 Score = 35.8 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 8/126 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +   L   L+   G+GGG++ V +L    QL G+   +   ++     G     + 
Sbjct: 16  VVVAIVCALFAMLASAAGIGGGVIFVSML----QLFGVSPHVAAPLSKAMIFGGSCVLTC 71

Query: 84  MSFMEHR----RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           M+  +H         I   ++           ++ +L+   + + FL     +F L    
Sbjct: 72  MTIFQHEDNDPTKPAIIWDLVFIIEPAAVSGALIGALINVVLPEWFLLVLEVVFLLYTTQ 131

Query: 140 LMLKRD 145
            MLK  
Sbjct: 132 KMLKNS 137


>gi|148545772|ref|YP_001265874.1| hypothetical protein Pput_0520 [Pseudomonas putida F1]
 gi|148509830|gb|ABQ76690.1| protein of unknown function DUF81 [Pseudomonas putida F1]
          Length = 265

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 99/261 (37%), Gaps = 28/261 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++   +F++G +  + G GGGL +VP     F L+G+       VA+G    V    +
Sbjct: 20  VLILGAIAFVAGFVDSIAG-GGGLFLVPG----FLLVGLPP----QVALGQEKLVSTLGT 70

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL-NKAFAIFCLLMGILM 141
           + +      +  +  ++         +   + + +I  + +  +     A+  L + I +
Sbjct: 71  LAAIRNFLANSKMVWQVALVGGPFSLLGAYLGAHLIVSISQETVGKIILALIPLGILIFL 130

Query: 142 LKRDRLYCERKFPDNYVKYIW---GMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
             +DR   ER+     +  +     +V GF  G  G G G    +         +  ++A
Sbjct: 131 TPKDRPVEERELSSRMLYTVVPLTCLVIGFYDGFFGPGTGSMFIIAFHYLLRMDLVSSSA 190

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            S   +      AL+  + +G             V + A+ ++   +IL   L + L+  
Sbjct: 191 NSKTFNFASNIGALVAFVSAGKV-----------VYLLALPLVAC-NILGNHLGSSLALR 238

Query: 258 IGKKYLTI--GFSMIMFTTSF 276
            G   +     FSM+   TS 
Sbjct: 239 KGNDVVRKALVFSMLCLFTSL 259


>gi|329754347|gb|AEC03571.1| magnetosome protein MamO [alpha proteobacterium NML-1]
          Length = 585

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 62/211 (29%), Gaps = 44/211 (20%)

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + +   +    +K  I       ++   + + +  S +     +F L+M    + 
Sbjct: 383 AASLRNDKAQLVQWDKVKPLIPWGVGGVILGYFIGNAIGDSVVGILLGLFALIMAGKAVM 442

Query: 144 R----------------------------------DRLYCERKFPDNYVKYIW-GMVTGF 168
                                                       P+  V+    G+  G 
Sbjct: 443 EILQPNAGEETAEAISAAEAEDEMDELMALADGTASPKASGVALPEGPVRSAVLGLPMGL 502

Query: 169 LSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            SG LG+ GG+    L  + G  S+  A A S+ +    +    +V    G         
Sbjct: 503 FSGILGISGGVIEVPLQRYVGRISLQNAIANSSVLVFWASVAGSVVAFLHGS-------- 554

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S G ++  A + +  + I    +   +   +
Sbjct: 555 STGLIHWEAPVTLALVMIPGAYVGGIIGARL 585



 Score = 37.0 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 11/99 (11%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V     G  SG+ G+ GG++ VP+             I +  A+  S  ++   SV   
Sbjct: 494 AVLGLPMGLFSGILGISGGVIEVPLQRYV-------GRISLQNAIANSSVLVFWASVAGS 546

Query: 87  MEHRRHGT----INMKILKDWIFVLPITTVVTSLMISHV 121
           +    HG+    I+ +       V+     V  ++ + +
Sbjct: 547 VVAFLHGSSTGLIHWEAPVTLALVMIPGAYVGGIIGARL 585


>gi|159900291|ref|YP_001546538.1| hypothetical protein Haur_3774 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159893330|gb|ABX06410.1| conserved hypothetical protein [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 135

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 54/125 (43%), Gaps = 8/125 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVI 78
           V  I  +++   ++G   G+FG+GGG +MVP +           ++    A GTS+   I
Sbjct: 16  VGMIINLLLIGLVAGVAGGMFGIGGGAIMVPAMVLLL-------ALDQKFATGTSIGAQI 68

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            P  ++    + + G ++ +        L + T   + + + +  + + K +  F  ++G
Sbjct: 69  LPVGLLGAFVYYKEGNLDWRASIIIALGLLVGTYFGAKIAAPISSATMKKFYGAFLFIIG 128

Query: 139 ILMLK 143
              L 
Sbjct: 129 ARYLF 133


>gi|167646433|ref|YP_001684096.1| hypothetical protein Caul_2471 [Caulobacter sp. K31]
 gi|167348863|gb|ABZ71598.1| protein of unknown function DUF81 [Caulobacter sp. K31]
          Length = 257

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 84/219 (38%), Gaps = 19/219 (8%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           HVA+GTS   +A  + ++ + H R G +       +     I + + S +   VD   L 
Sbjct: 45  HVAIGTSAAAVAVNAGLNLVGHGRGGRVKWPCASVFAGAGLIGSFLGSTLAKAVDGQRLL 104

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI----WGMVTGFLSGALGVGGGIFTNL 183
             FA+    + + M++R +   +     +    +     G++TG  +G  GVGGG     
Sbjct: 105 LGFAVAMAAIALSMMRRPKSQGDPLVHISPGLMLRLAPLGVLTGLAAGFFGVGGGFLIVP 164

Query: 184 -LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            LM   G ++  ATA+S    +L      L    SG             +N     + + 
Sbjct: 165 GLMAATGMTLANATASSLLSVSLFGAATSLNYAASGL------------INWPVAGLFVL 212

Query: 243 ISILITPLATKLSYMIGKKYL--TIGFSMIMFTTSFVFA 279
             +    L  + + ++  + L     F+ ++   +   A
Sbjct: 213 GGLAGGALGVRGAGLLAGRALLARRLFAGLVLLVAAYVA 251


>gi|312961838|ref|ZP_07776336.1| protein of unknown function DUF81 [Pseudomonas fluorescens WH6]
 gi|311284097|gb|EFQ62680.1| protein of unknown function DUF81 [Pseudomonas fluorescens WH6]
          Length = 270

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 98/278 (35%), Gaps = 44/278 (15%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L  V   L G + GL G GGG++ VP L            + M  A   SL  +   +
Sbjct: 1   MLLASVLGLLMGLVMGLTGAGGGILGVPALVLGL-------GLSMTQAAPISLLAVGAAA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  ++  RHG +  +       +  + + +       + +  L   F+   +L+   ML
Sbjct: 54  AVGAIDGLRHGLVRYRAALLIALLGGLFSPLGVFFAHQLPEPLLMGLFSALMVLVAWRML 113

Query: 143 KRDRLYCERK------------------------FPDNYVKYIWGMVTGFLSGALGVGGG 178
           +R++L                                +      G VTG +SG LGVGGG
Sbjct: 114 QREKLEVGPSDHGAASWGQKNCMLNQQTGRLAWTAKCSATLAALGAVTGAVSGLLGVGGG 173

Query: 179 IFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
                         +    ATS  V +LI+   +    ++G  +  +    +G       
Sbjct: 174 FLIVPAFKQLTDVQMRGIVATSLMVISLISLIGVAGAFHAGVRIEPVGWVFIG------- 226

Query: 238 LIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                 SI+   +  +L  +I  + L +GF+ +    +
Sbjct: 227 -----ASIVGMLVGRRLCSLIPARALQVGFAGLCVLVA 259



 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 7/119 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +     ++G +SGL GVGGG ++VP   +          + M   + TSL VI+  S++ 
Sbjct: 154 LAALGAVTGAVSGLLGVGGGFLIVPAFKQL-------TDVQMRGIVATSLMVISLISLIG 206

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                  G     +   +I    +  +V   + S +    L   FA  C+L+ + ML +
Sbjct: 207 VAGAFHAGVRIEPVGWVFIGASIVGMLVGRRLCSLIPARALQVGFAGLCVLVAVGMLAK 265



 Score = 35.4 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 13/123 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G++ G + G  G GGGI     ++   G S+ +A   S       A    +  +
Sbjct: 2   LLASVLGLLMGLVMGLTGAGGGILGVPALVLGLGLSMTQAAPISLLAVGAAAAVGAIDGL 61

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G             V   A L+I  +  L +PL    ++ + +  L   FS +M   +
Sbjct: 62  RHGL------------VRYRAALLIALLGGLFSPLGVFFAHQLPEPLLMGLFSALMVLVA 109

Query: 276 FVF 278
           +  
Sbjct: 110 WRM 112


>gi|210134426|ref|YP_002300865.1| integral membrane protein [Helicobacter pylori P12]
 gi|210132394|gb|ACJ07385.1| integral membrane protein [Helicobacter pylori P12]
          Length = 277

 Score = 53.2 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 75/215 (34%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK- 143
             + + + G ++++          +  ++ SL++  ++   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLREGSFAALGGLMGAILGSLILKIINDKILMGVFVVVVCYTFIKYAFS 119

Query: 144 ------------------RDRLYCERKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
                                   +R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 SNKKPKHFEEMHFDLHANNKTPEKKRAIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|332290804|ref|YP_004429413.1| protein of unknown function DUF81 [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332168890|gb|AEE18145.1| protein of unknown function DUF81 [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 122

 Score = 53.2 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 1/77 (1%)

Query: 67  MHVAMGTSLGVI-APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
            H A GTSL V+  P + ++   +   G +N K          +   + S +  ++D+  
Sbjct: 43  QHEAQGTSLAVLAVPVTFLAAYNYYNEGYVNWKYAAVIAVFFVVGGFLGSKLAVNLDQKT 102

Query: 126 LNKAFAIFCLLMGILML 142
           L + F    L++ I ML
Sbjct: 103 LKRIFGAVLLVLSIKML 119



 Score = 44.3 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 39/97 (40%), Gaps = 11/97 (11%)

Query: 182 NLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
            L+++    + ++A  TS  V   +A P   +  Y+ +          G+VN     +I 
Sbjct: 33  PLMIMLLHFNQHEAQGTSLAV---LAVPVTFLAAYNYYNE--------GYVNWKYAAVIA 81

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              ++   L +KL+  + +K L   F  ++   S   
Sbjct: 82  VFFVVGGFLGSKLAVNLDQKTLKRIFGAVLLVLSIKM 118


>gi|146303332|ref|YP_001190648.1| hypothetical protein Msed_0549 [Metallosphaera sedula DSM 5348]
 gi|145701582|gb|ABP94724.1| protein of unknown function DUF81 [Metallosphaera sedula DSM 5348]
          Length = 284

 Score = 53.2 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++  F +G +SGL G+G G + V         M    ++ M V   TS  +I  T+ 
Sbjct: 166 WLGLIVMFFAGFISGLLGIGSGALKV-------IGMDYAMNLPMKVTTTTSNFMIGVTAA 218

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +   G I   +       + I ++V + ++  +    +   F +    +GI M+ 
Sbjct: 219 TGSGIYWALGYIQPFLAAPTAIGVLIGSLVGTRVLVRLKNKRIRAVFLVILAFLGIQMIL 278

Query: 144 R 144
           R
Sbjct: 279 R 279



 Score = 53.2 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 85/265 (32%), Gaps = 52/265 (19%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VP+L+           I +  A G+SL     TS  S   + +    +++I       
Sbjct: 31  VLVPILTLYL-------GIPIIYATGSSLISTIATSSGSASAYVKERITSVRIGISLEIA 83

Query: 107 LPITTVVTSLMISHVDKSFLN----KAFAIFCLLMGILMLKRDRLYCERKFP-------- 154
               ++V SL ++++    L       F I  L      LK+ +       P        
Sbjct: 84  TTAGSIVGSLTVAYIYSLHLQYLVYIVFGIVLLFSIYPTLKKMKGEFPTPKPPDWTTKLL 143

Query: 155 --------------------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIY 193
                                 ++  I     GF+SG LG+G G    + M +     + 
Sbjct: 144 NLYGEYFDPANNTTVKYWGVRWWLGLIVMFFAGFISGLLGIGSGALKVIGMDYAMNLPMK 203

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
             T TS  +  + A     +             W+LG++            ++ + + T+
Sbjct: 204 VTTTTSNFMIGVTAATGSGIY------------WALGYIQPFLAAPTAIGVLIGSLVGTR 251

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVF 278
           +   +  K +   F +I+       
Sbjct: 252 VLVRLKNKRIRAVFLVILAFLGIQM 276


>gi|260767330|ref|ZP_05876269.1| membrane protein [Vibrio furnissii CIP 102972]
 gi|260617653|gb|EEX42833.1| membrane protein [Vibrio furnissii CIP 102972]
          Length = 259

 Score = 53.2 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 76/199 (38%), Gaps = 16/199 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  +     R+G +++K ++  I    I + + + ++   D S L   
Sbjct: 46  ALATNKLQSSFGSFSATWYFVRNGIVSLKEMRLAIVCTFIGSAIGAELVQQFDASLLTSL 105

Query: 130 FAIFCLLMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             +  + + +  L   +      ++  P+       G   GF  G  G G G IFT   +
Sbjct: 106 IPLLLIAISLYFLLAPQTRADSGKKPLPEALFALCIGGGIGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           +    S+  ATA +  ++      AL   + +G     LP W +G       L +     
Sbjct: 166 VLGHFSLVDATARTKVLNFTSNIAALTFFLIAG-----LPIWQIG-------LTMAVGGF 213

Query: 246 LITPLATKLSYMIGKKYLT 264
           +   +  K+    G K++ 
Sbjct: 214 IGARMGAKVVVTKGHKWIR 232


>gi|217974372|ref|YP_002359123.1| hypothetical protein Sbal223_3215 [Shewanella baltica OS223]
 gi|217499507|gb|ACK47700.1| protein of unknown function DUF81 [Shewanella baltica OS223]
          Length = 305

 Score = 53.2 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 92/261 (35%), Gaps = 21/261 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            I         +   G GGG++ +PV S   F       +  M    G + G I   S  
Sbjct: 55  FIFLGITGAIFANSTGAGGGVIFIPVFSSLNFSESQSVATSFMIQCFGMTAGAI---SWS 111

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV---DKSFLNKAFAIFCLLMGILM 141
            + +                 +    +V+       +     S L+ +F+IF +++GI +
Sbjct: 112 LYYKKHHREDAAWSGFVQAALLAAFFSVLGFWSSQLLQLNSPSSLHTSFSIFSIVLGIAI 171

Query: 142 LKRDR---LYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           +   +          P D     + G   G ++  L VG G    + ++  G     A A
Sbjct: 172 IISCKSSTPITRAIMPVDFLWLALIGYFGGIITAWLSVGVGELVVIYLMLRGLCAKMAVA 231

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T   VSA+  + A  + I+S                   VL   P +++   LA KL+  
Sbjct: 232 TGVIVSAITVWSASPIHIFSTNSHALFEL----------VLFAGPGAVIGGLLARKLALY 281

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +  K L + FS+ +  T  V 
Sbjct: 282 LPVKVLKLFFSIWIILTGSVM 302



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 43/122 (35%), Gaps = 6/122 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              + +  +  G ++    VG G ++V  +    + +       M VA G  +  I   S
Sbjct: 190 FLWLALIGYFGGIITAWLSVGVGELVV--IYLMLRGL----CAKMAVATGVIVSAITVWS 243

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                    +     +++        I  ++   +  ++    L   F+I+ +L G +ML
Sbjct: 244 ASPIHIFSTNSHALFELVLFAGPGAVIGGLLARKLALYLPVKVLKLFFSIWIILTGSVML 303

Query: 143 KR 144
             
Sbjct: 304 AS 305


>gi|293553139|ref|ZP_06673777.1| hypothetical protein EfmE1039_0519 [Enterococcus faecium E1039]
 gi|291602730|gb|EFF32944.1| hypothetical protein EfmE1039_0519 [Enterococcus faecium E1039]
          Length = 278

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 97/262 (37%), Gaps = 24/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  V   L+ T+  + G+GGG+++ P+L        I       ++  +++ V   + V
Sbjct: 4   LIYFVVIVLANTVGAISGIGGGVLIKPILDL------IGAHSVAGISFYSTVAVFTMSIV 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------LNKAFAIFCLL 136
            +  +     ++N +I+        +  VV +++     + F       L + F     L
Sbjct: 58  STVRQVSSGKSLNWQIVGWVSSGAVVGGVVGNIVFEVFLQLFENEKHVQLIQIFLTVLTL 117

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           +            +          I G+V GFL+  LG+GGG     LLML +   I +A
Sbjct: 118 V-FAFFYTKHHQPKFHLTSWTWYLICGVVLGFLASFLGIGGGPVNVSLLMLMFALPIKEA 176

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           T  S           L+    +          S    ++  +  ++P +I+      + S
Sbjct: 177 TLYSLSTIFFSQLAKLVTIALTS---------SFMRFDLSMLFYVIPAAIIGGLWGARFS 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
            ++  K +T  F  I+     +
Sbjct: 228 RILSPKKVTFIFQAIVIVVLLI 249



 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 10/124 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              ++   + G L+   G+GGG V V +L   F       ++ +  A   SL  I  + +
Sbjct: 137 TWYLICGVVLGFLASFLGIGGGPVNVSLLMLMF-------ALPIKEATLYSLSTIFFSQL 189

Query: 84  MSFMEHRRHGTI---NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
              +      +    ++ +L   I    I  +  +     +    +   F    +++ ++
Sbjct: 190 AKLVTIALTSSFMRFDLSMLFYVIPAAIIGGLWGARFSRILSPKKVTFIFQAIVIVVLLI 249

Query: 141 MLKR 144
            L  
Sbjct: 250 NLYN 253


>gi|257883946|ref|ZP_05663599.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
 gi|257819784|gb|EEV46932.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
          Length = 275

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 93/253 (36%), Gaps = 26/253 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  V   L+ T+  + G+GGG+++ P+L        I       ++  +++ V   + V
Sbjct: 1   MIYFVVIVLANTVGAISGMGGGVLIKPILDL------IGAHSIAGISFYSTVAVFTMSIV 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------LNKAFAIFCLL 136
            +  +     ++N +I+        +  +  +++     + F       L + F     L
Sbjct: 55  STVRQVSSGKSLNWQIVGWVSGGAVVGGIAGNIVFEVFLRLFENEKHVQLIQIFLTVLTL 114

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           +            +          I G++ GFL+  LG+GGG     LLML +   I +A
Sbjct: 115 V-FAFFYTKHHQPKFHLTSWIWYLICGVILGFLASFLGIGGGPINVSLLMLMFALPIKEA 173

Query: 196 TATSAGVSALIAFPALLV-RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
              S           L+   + SG+    L            +  I+P +++      K 
Sbjct: 174 ALYSLSTIFFSQLAKLVTIALTSGFMRFDLS----------MLFYIIPAAVIGGLWGAKF 223

Query: 255 SYMIGKKYLTIGF 267
           S ++  K +T  F
Sbjct: 224 SRILSPKKVTFIF 236


>gi|257095984|ref|YP_003169625.1| hypothetical protein CAP2UW1_4469 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257048508|gb|ACV37696.1| protein of unknown function DUF81 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 259

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 81/252 (32%), Gaps = 25/252 (9%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G +  + G GGGLV +P L  A                GT+       +  +   + R  
Sbjct: 22  GFIDSVVG-GGGLVQIPALFNAL------PQESPATLFGTNKFSSIFGTSNAAWSYARRI 74

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL-----Y 148
            +  +            + + ++ ++ +  + L     I  +        R         
Sbjct: 75  RMPWRTTLPAAMAAFACSYLGAMAVAWLPVAMLRPLILILLIGAAAYTFARQDFGAVHRP 134

Query: 149 CERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIA 207
             R   +     I G   GF  G  G G G     L + F+G     A+A S  V+    
Sbjct: 135 QHRGRREFAFALILGGAIGFYDGFFGPGTGSFLIFLFIRFFGFDFLHASAASKVVNVATN 194

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
             AL   + +G  L  L             +++   ++L + L T L+   G  ++   F
Sbjct: 195 LAALGFFVPNGHILPVL------------AVLMATCNVLGSLLGTHLALRHGSGFVRKAF 242

Query: 268 SMIMFTTSFVFA 279
             ++      FA
Sbjct: 243 LGVVGVFILKFA 254


>gi|254425830|ref|ZP_05039547.1| hypothetical protein S7335_397 [Synechococcus sp. PCC 7335]
 gi|196188253|gb|EDX83218.1| hypothetical protein S7335_397 [Synechococcus sp. PCC 7335]
          Length = 120

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 8/122 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-T 81
           I L ++    +G +SGL G+GGG+++VP L   F           H A GT+L ++ P  
Sbjct: 4   IFLYLLLGLSAGVVSGLIGIGGGVIIVPALIFGFGF-------AQHDAQGTTLAMLVPPV 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            +++   + R G +N ++         I  ++ + + + +    L K F    L + + M
Sbjct: 57  GLLAAWTYYRQGYVNFQVAALLCVGFFIGGLLGAKLATTLPNVLLEKVFGAAMLAIALKM 116

Query: 142 LK 143
           + 
Sbjct: 117 IF 118


>gi|146302599|ref|YP_001197190.1| hypothetical protein Fjoh_4872 [Flavobacterium johnsoniae UW101]
 gi|146157017|gb|ABQ07871.1| protein of unknown function DUF81 [Flavobacterium johnsoniae UW101]
          Length = 261

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 90/244 (36%), Gaps = 33/244 (13%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           +P+L   F+       +    A   SL ++  T++     H + G + +K    +     
Sbjct: 28  IPILVYLFK-------VNPDQATSYSLFIVGLTALFGSYSHYKMGNLKLKSALYFAVPSV 80

Query: 109 ITTV---------VTSLMISHVDKSFLN-----KAFAIFCLLMGILMLKRDRLYCERKFP 154
           I+ +         + S + S    S          F+I  +   I M+K+++   +    
Sbjct: 81  ISILIIREVIFPQIASTIFSIASYSVSKDFLIMIVFSILMITAAISMIKKNQSEIKSTET 140

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
           +     I G + G ++G LG GGG      +LF+    + +A  TS  +  + +      
Sbjct: 141 NYTQLSIIGFLVGIVTGFLGAGGGFLIIPALLFFAKLPMKQAVGTSLLIITINSSIGFGG 200

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            +Y G  +     ++        +L +  +++L   + ++LS  I    L   F   +  
Sbjct: 201 DLYIGTPI----DYTF-------LLGVSGMALLGMFIGSQLSKKIDGAKLKPLFGWFVLV 249

Query: 274 TSFV 277
             F 
Sbjct: 250 MGFY 253



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 8/121 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +  FL G ++G  G GGG +++P L            + M  A+GTSL +I   S + 
Sbjct: 145 LSIIGFLVGIVTGFLGAGGGFLIIPALLFF-------AKLPMKQAVGTSLLIITINSSIG 197

Query: 86  FMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           F      GT I+   L     +  +   + S +   +D + L   F  F L+MG  ++ +
Sbjct: 198 FGGDLYIGTPIDYTFLLGVSGMALLGMFIGSQLSKKIDGAKLKPLFGWFVLVMGFYIITK 257

Query: 145 D 145
           +
Sbjct: 258 E 258


>gi|313819521|gb|EFS57235.1| integral membrane family protein [Propionibacterium acnes HL046PA2]
          Length = 241

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 88/240 (36%), Gaps = 21/240 (8%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+M+P L     L+G+     +   +GT+       ++ + + + R    + ++   
Sbjct: 11  GGGLIMLPSL-----LVGLPTETPVATIVGTNKVAQVVGNLTAGVGYLRKQRPDWRMFLW 65

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD---NYVK 159
              +  +  V+ + +++++ ++       +  +++GI   +R  L             + 
Sbjct: 66  TAVLAGLGAVLGARIVTYMSRAVYTPILLVVLVIIGIYTWRRPSLGAGHNGEGGKHPILV 125

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS-IYKATATSAGVSALIAFPALLVRIYSG 218
            I G+  G   GA+G G G F  L  +  G     KA+  +   +A+     +       
Sbjct: 126 PIIGLFLGCYDGAIGPGVGTFWVLTYVAVGGDSFLKASGMAKICNAVTNLVTITTLAIH- 184

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                      G V       ++  ++L   +  + +   G  ++   F ++    +   
Sbjct: 185 -----------GHVWWHIAWPLVISNVLGGLIGARTAMKHGNGFVRTMFLIVTSVLAVRM 233


>gi|88811037|ref|ZP_01126293.1| hypothetical protein NB231_09553 [Nitrococcus mobilis Nb-231]
 gi|88791576|gb|EAR22687.1| hypothetical protein NB231_09553 [Nitrococcus mobilis Nb-231]
          Length = 272

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 46/124 (37%), Gaps = 5/124 (4%)

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD 155
           +  I+ + +    +   + +   + V  + L +  A+  + +  ++L           P+
Sbjct: 86  HWSIVANLLAGSLVGAWLGAGWATRVHATTLYRIIAVLLVFIATVLLLGHDAAAPAPLPN 145

Query: 156 NYVKYI----WGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPA 210
             V+ I     G   G ++  LGV GG +    L+L +G  I  A + +  +S       
Sbjct: 146 GPVQSILGVAAGFAIGVVAALLGVAGGELLIPTLVLLFGLDIKLAGSLALVISLPTMVVG 205

Query: 211 LLVR 214
               
Sbjct: 206 FTRY 209


>gi|255022870|ref|ZP_05294856.1| hypothetical protein LmonocyFSL_04010 [Listeria monocytogenes FSL
           J1-208]
          Length = 203

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 63/203 (31%), Gaps = 41/203 (20%)

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR-------------------- 144
               I  +  + +   +  + L   F +  L     M+K+                    
Sbjct: 5   IATTIGAITGAFVSGLLSATALYIIFGLLLLYSAFNMIKKVGTEFPTNVKPDPLATKLNL 64

Query: 145 --------DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKA 195
                    R   + +  +    +      G  SG LG+G G F  + + +F    +  +
Sbjct: 65  HDSYYDKSLRQTVDYQVANVPAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVS 124

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +ATS  +  + A  +  V ++ G     +               +    ++   L T++ 
Sbjct: 125 SATSNLMMGVTAAASATVYLFQGDIQPAI------------AAPVAIGVLVGATLGTRIM 172

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
             +  K + I F  ++   +F  
Sbjct: 173 QRLKSKVIRIIFIPVILYVAFQM 195



 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  SGL G+G G   V         + +   + + V+  TS  ++  T+  S   +   
Sbjct: 94  AGIASGLLGIGSGAFKV-------MALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQ 146

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           G I   I       + +   + + ++  +    +   F    L +   M+ 
Sbjct: 147 GDIQPAIAAPVAIGVLVGATLGTRIMQRLKSKVIRIIFIPVILYVAFQMIL 197


>gi|261366931|ref|ZP_05979814.1| putative membrane protein [Subdoligranulum variabile DSM 15176]
 gi|282571047|gb|EFB76582.1| putative membrane protein [Subdoligranulum variabile DSM 15176]
          Length = 273

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 90/252 (35%), Gaps = 21/252 (8%)

Query: 8   FSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
           FS +  ++ +    ++ L+I A     +L      GGG++ VP     F        +  
Sbjct: 5   FSPLTQITVNVFPLWVVLMICAGVFLASLMDAIAGGGGIISVPTYLIVF------AGLPA 58

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           H A+GT+    A  ++ S     R G ++ ++         +  V  + +  H     L 
Sbjct: 59  HYALGTNKLSSAVGTMFSTGRFIRQGYVDWRLFAPAAIFSLLGAVGGTWLQLHTPDVVLK 118

Query: 128 KAFAIFCLLMGILMLKRDRLYCERK----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
               +   ++ ++ L+      E           V +   ++ G   G  G G G F  L
Sbjct: 119 YLLLVVLPVVAVVTLRNHNWPDETAAMQFSRRAAVVWAASLIIGAYDGYYGPGTGTFLML 178

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           + +  G      T  +AG   +I   + +  +++          + G V +   LI    
Sbjct: 179 IFIRLG---KMDTRHAAGGVKVINLASNIGSLFT--------ALTAGTVYVAVGLIAAIA 227

Query: 244 SILITPLATKLS 255
           SIL   L   L+
Sbjct: 228 SILGHYLGAGLA 239


>gi|311067730|ref|YP_003972653.1| putative integral inner membrane protein [Bacillus atrophaeus 1942]
 gi|310868247|gb|ADP31722.1| putative integral inner membrane protein [Bacillus atrophaeus 1942]
          Length = 255

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 58/263 (22%), Positives = 96/263 (36%), Gaps = 34/263 (12%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               GTL GL GVGG      +L+    L+GI+ S    +A+GT L   + T +     H
Sbjct: 10  GLFVGTLVGLTGVGGAA----LLTPLLILLGINPS----IAVGTDLVYNSITKLFGVASH 61

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGILM-- 141
            +  TIN+K++K        +      ++             +  A      L+ + +  
Sbjct: 62  WKQKTINLKLVKYLAIGSIPSASAAIGILHMFPAFHQHQEEIIKHALGYVMTLVALSIII 121

Query: 142 -------LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
                  L+ +R   +       +  + G+V GF+ G   +G G    + ML+    +  
Sbjct: 122 RVFLDKKLRPNRWQLKSLEDKRALTILIGVVFGFIVGLTSIGSGSLFAIAMLYL-FKMK- 179

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
              TS  V   IA   LLV       + GL   S G V+      +L  SI    L +  
Sbjct: 180 ---TSEIVGTDIAHAFLLV------TVAGLLNASFGSVDYLLAANLLIGSIPGVLLGSHF 230

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
           S     + L    + I+  +   
Sbjct: 231 SPKFSPRPLQFIMAAIILISGLK 253


>gi|310817272|ref|YP_003965236.1| hypothetical protein EIO_2865 [Ketogulonicigenium vulgare Y25]
 gi|308756007|gb|ADO43936.1| putative membrane protein [Ketogulonicigenium vulgare Y25]
          Length = 250

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 97/248 (39%), Gaps = 25/248 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D + L+I A+FL+G +  + G GGGL+ +PVL  A              A+ T+      
Sbjct: 7   DILMLLIAAAFLAGVVDSIAG-GGGLITLPVLMLA--------GAPPVTAIATNKIQGVF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            + M+   + R G ++++          + +V+ +L+ S +    +     I  + + + 
Sbjct: 58  GTAMATYSYARAGHVDLRKQIWPAAAAFVASVLGALLTSSLPVEAIRMGLPILLIGIALF 117

Query: 141 MLKRDRLY-CERKFPDNYVKYIWGMV--TGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
              +  L   +R+     + +   +V   GF  G +G G G F     +   G  + KAT
Sbjct: 118 FALKPGLNDIDRRQRITPLLFGASVVPLVGFYDGLVGPGAGAFYMIGFVALAGYGVLKAT 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++       +L            P W  G       L++    +    + ++L+ 
Sbjct: 178 AHTKLLNLSSNVGGMLAFAVV-----ATPWWITG-------LLMGLAQVAGAYVGSRLAM 225

Query: 257 MIGKKYLT 264
            +G K + 
Sbjct: 226 RVGAKIIK 233


>gi|16329245|ref|NP_439973.1| hypothetical protein sll1052 [Synechocystis sp. PCC 6803]
 gi|1651725|dbj|BAA16653.1| sll1052 [Synechocystis sp. PCC 6803]
          Length = 124

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 8/121 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-T 81
           I   I    ++G  SGL G+GGGL++VPVL   F           H+A GT+L ++ P  
Sbjct: 8   IISFIALGLIAGFASGLIGIGGGLIIVPVLVFGFGF-------SQHLAQGTTLALMVPPI 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            + +   + + G +++K+         + ++  + + +++    L + F    L++ + M
Sbjct: 61  GLAAAWTYYQKGDVDIKVAVLICLGFVLGSLFGARVATNISNELLGRIFGGAMLVIALKM 120

Query: 142 L 142
           +
Sbjct: 121 I 121


>gi|313496852|gb|ADR58218.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 261

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 78/201 (38%), Gaps = 14/201 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++   +F++G +  + G GGGL +VP     F L+G+       VA+G    V    +
Sbjct: 16  VLILGAIAFVAGFVDSIAG-GGGLFLVPG----FLLVGMPP----QVALGQEKLVSTLGT 66

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL-NKAFAIFCLLMGILM 141
           + +      +  +  ++    +    +   + + +I  + +  +     A+  L + I +
Sbjct: 67  LAAIRNFLANSRMVWQVALVGVPFSLLGAYLGAHLIVSISQETVGKIILALIPLGILIFL 126

Query: 142 LKRDRLYCERKFPDNYVKYIW---GMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
             +DR   ERK     +  +     +  GF  G  G G G    +         +  ++A
Sbjct: 127 TPKDRPVEERKLSSRMLYTVVPLTCLAIGFYDGFFGPGTGSMFIIAFHYLLRMDLVSSSA 186

Query: 198 TSAGVSALIAFPALLVRIYSG 218
            S   +      AL+  + +G
Sbjct: 187 NSKTFNFASNIGALVAFVSAG 207


>gi|163853235|ref|YP_001641278.1| hypothetical protein Mext_3835 [Methylobacterium extorquens PA1]
 gi|163664840|gb|ABY32207.1| protein of unknown function DUF81 [Methylobacterium extorquens PA1]
          Length = 260

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 93/267 (34%), Gaps = 29/267 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L +++    G   GL G GG ++  P+L      +G+      HVA+GT    +A ++
Sbjct: 3   VVLALLSGGFVGFSLGLIGGGGSILATPLLLYV---VGVGQP---HVAIGTGALAVAVSA 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +F  H R G +       +     +  +  S +    D   L   FA+  + +G+LML
Sbjct: 57  MANFTGHWRAGNVRWGNALVFAAFGVVGALGGSTLGKAFDGERLLFLFALLMIAVGLLML 116

Query: 143 KRDRLYCERKFPDN--------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIY 193
           +        +                +  +  G  SG  G+GGG      ++F  G  + 
Sbjct: 117 RSGERNGSGRVAAGAPSAPAFTPRLAVVALAVGAASGFFGIGGGFLIVPGLVFATGMPMI 176

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A  TS                 SG             ++       +   ++      +
Sbjct: 177 NAIGTSLFAVGAFGLATAANYALSGL------------IDWPVAAQYIAGGLIGGWAGMR 224

Query: 254 LSYMIGKKY--LTIGFSMIMFTTSFVF 278
           L+  +  +   L   F+ ++FT +   
Sbjct: 225 LACRLAGRKGALDRIFASLIFTVAAYM 251



 Score = 38.1 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 36/100 (36%), Gaps = 9/100 (9%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++VP L  A         + M  A+GTSL  +    + +   +   G I+  +   +I  
Sbjct: 162 LIVPGLVFA-------TGMPMINAIGTSLFAVGAFGLATAANYALSGLIDWPVAAQYIAG 214

Query: 107 LPITTVVTSLMISHVDKS--FLNKAFAIFCLLMGILMLKR 144
             I       +   +      L++ FA     +   ML R
Sbjct: 215 GLIGGWAGMRLACRLAGRKGALDRIFASLIFTVAAYMLYR 254


>gi|268591933|ref|ZP_06126154.1| putative membrane protein [Providencia rettgeri DSM 1131]
 gi|291312322|gb|EFE52775.1| putative membrane protein [Providencia rettgeri DSM 1131]
          Length = 264

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 74/230 (32%), Gaps = 26/230 (11%)

Query: 62  DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV 121
             +  + +A    L  I   + +S ++      I  K       +   +      +   V
Sbjct: 33  SQNWSVALAAPVGLLAITIAAFISVIQGLIKKNIRYKAAIWIALLSIPSAKYGIYLAHIV 92

Query: 122 DKSFLNKAFAIFCLLMGILMLKRDRLYCERK--------------FPDNYVKYIWGMVTG 167
              +L   F++  L +G  +                              +    G++TG
Sbjct: 93  PPVWLTLIFSLVMLYVGGRIFFNRGDEQNDAHCLINTETGKFIWNTKTALIFGGIGVITG 152

Query: 168 FLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
            L+G LGVGGG      +  +   ++    ATS  V   I   ++ + +++G+       
Sbjct: 153 LLTGMLGVGGGFIIVPALRKFTNLNMKSIIATSLMVIFCIGSISIFINVWNGFQYPKEIS 212

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                      ++ +   ++   +   + + I  K + I FS  +   + 
Sbjct: 213 -----------IVFIASCVVGLLIGRLIMHYISNKAIQILFSSAVIFVAL 251



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 8/117 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +      ++G L+G+ GVGGG ++VP L K         ++ M   + TSL VI     
Sbjct: 142 LIFGGIGVITGLLTGMLGVGGGFIIVPALRKF-------TNLNMKSIIATSLMVIFCIGS 194

Query: 84  MSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           +S   +  +G     +I   +I    +  ++  L++ ++    +   F+   + + +
Sbjct: 195 ISIFINVWNGFQYPKEISIVFIASCVVGLLIGRLIMHYISNKAIQILFSSAVIFVAL 251


>gi|304412595|ref|ZP_07394200.1| protein of unknown function DUF81 [Shewanella baltica OS183]
 gi|307303611|ref|ZP_07583364.1| protein of unknown function DUF81 [Shewanella baltica BA175]
 gi|304349071|gb|EFM13484.1| protein of unknown function DUF81 [Shewanella baltica OS183]
 gi|306912509|gb|EFN42932.1| protein of unknown function DUF81 [Shewanella baltica BA175]
          Length = 305

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 93/261 (35%), Gaps = 21/261 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            I         +   G GGG++ +PV S   F       +  M    G + G I   S  
Sbjct: 55  FIFLGITGAIFANSTGAGGGVIFIPVFSSLNFSESQSVATSFMIQCFGMTAGAI---SWS 111

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV---DKSFLNKAFAIFCLLMGILM 141
            + + R               +    +V+       +     S L+ +F+IF +++GI +
Sbjct: 112 LYYKKRHREDAAWSGFVKAALLAAFFSVLGFWSSQLLQLNSPSSLHTSFSIFSIVLGIAI 171

Query: 142 LKRDRLYC----ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           +   +         +  D     + G   G ++  L VG G    + ++  G     A A
Sbjct: 172 VISSKSSTPITRAIRPVDFLWLALIGYFGGIITAWLSVGVGELVVIYLMLRGLCAKMAIA 231

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T   VSA+  + A  + I+S                   VL   P +++   LA KL+  
Sbjct: 232 TGVIVSAITVWSASPIHIFSTNSHALFEL----------VLFAGPGAVIGGLLARKLALY 281

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +  K L + FS+ +  T  V 
Sbjct: 282 LPVKVLKLFFSIWIILTGSVM 302



 Score = 37.4 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 43/122 (35%), Gaps = 6/122 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              + +  +  G ++    VG G ++V  +    + +       M +A G  +  I   S
Sbjct: 190 FLWLALIGYFGGIITAWLSVGVGELVV--IYLMLRGL----CAKMAIATGVIVSAITVWS 243

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                    +     +++        I  ++   +  ++    L   F+I+ +L G +ML
Sbjct: 244 ASPIHIFSTNSHALFELVLFAGPGAVIGGLLARKLALYLPVKVLKLFFSIWIILTGSVML 303

Query: 143 KR 144
             
Sbjct: 304 AS 305


>gi|255534243|ref|YP_003094614.1| hypothetical protein FIC_00076 [Flavobacteriaceae bacterium
           3519-10]
 gi|255340439|gb|ACU06552.1| hypothetical protein FIC_00076 [Flavobacteriaceae bacterium
           3519-10]
          Length = 124

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 8/124 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV-IAPT 81
           I  +++    +G LSG+ G+GGG+VMVPVL   F           H A GT+L + I P 
Sbjct: 8   IIGLMILGLFAGYLSGMVGIGGGIVMVPVLVLLFGF-------TQHRAQGTTLALLIFPV 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            ++  M + + G +++K          + + + S     V +  L K FA   + +   M
Sbjct: 61  GILGVMNYYKTGNVDLKTTLLLCVGFVLGSYLGSKTAIAVSQETLRKVFAFLLVAVAAKM 120

Query: 142 LKRD 145
             + 
Sbjct: 121 FFQK 124


>gi|217076153|ref|YP_002333869.1| hypothetical protein THA_20 [Thermosipho africanus TCF52B]
 gi|217036006|gb|ACJ74528.1| membrane protein, putative [Thermosipho africanus TCF52B]
          Length = 245

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 102/261 (39%), Gaps = 25/261 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +     +  A   +G ++ L G GG ++ +PVL+           + + VA GT+   I 
Sbjct: 3   ILLYLFLFFAGISAGFINVLAG-GGSMLTLPVLTLL--------GLDISVANGTNRVGIL 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++++    ++H    +K          I  +  +  + +++K  L K      L M  
Sbjct: 54  LQNIIATKNFKKHRLFTLKEGFSIALPATIGAIFGTFTVLNLNKELLEKIIGTIFLFMSF 113

Query: 140 LMLKRDR-LYCERKFPDNY-VKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKAT 196
            +L + +     +K   NY + +I     GF  G +  G G F  L ++   G +I K  
Sbjct: 114 FILYKPKLWEEGKKVKRNYLITFIVFFAIGFYGGFIQAGVGFFLILGLVLVEGNNIIKTN 173

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A    V       + L+ + +G             V+I   L++   +++   L TK + 
Sbjct: 174 ALKVFVVLNYTVFSFLIFLLNGK------------VDILKGLVLAAGTMIGANLGTKTAL 221

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
             G K++   F  +M   S +
Sbjct: 222 KTGAKFV-RIFVFLMIVISAI 241


>gi|207744832|ref|YP_002261224.1| protein of unknown function duf81 [Ralstonia solanacearum IPO1609]
 gi|206596242|emb|CAQ63169.1| protein of unknown function duf81 [Ralstonia solanacearum IPO1609]
          Length = 252

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 90/244 (36%), Gaps = 26/244 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS-LGVIAPTSVMSFMEHRRHGTINMKILK 101
           GGGLV +P L  A+       ++     +GT+ L  ++ T+  +   + R   I      
Sbjct: 22  GGGLVQIPALFSAY------PNLAPATLIGTNKLASMSGTATAAVR-YGRTVRIYWGATA 74

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP-----DN 156
             +    + +++ +  ++H+    L +A      ++ +  + +  L  E         + 
Sbjct: 75  PAMVTAFLCSLLGAWALTHIPAEPLRRALPFVLAVLLVYTVAKKDLGAEHAPSLSGWRER 134

Query: 157 YVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
               + G V GF  G  G G G     + +  +G     A+A++  V+      ALL+  
Sbjct: 135 ATALLAGAVLGFYDGVFGPGTGSFLMIVFVRVFGYDFLHASASTKIVNLATNVAALLLLA 194

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                         G V     L++   ++L     + L+   G +++   F +++    
Sbjct: 195 AK------------GHVWWQLGLVMAVANVLGNQAGSYLALKHGSRFVRKVFIVVVLALI 242

Query: 276 FVFA 279
              A
Sbjct: 243 LKTA 246



 Score = 36.2 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 7/114 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A  + G   G+FG G G  ++ V  + F    +  S    +       V   T+V + 
Sbjct: 138 LLAGAVLGFYDGVFGPGTGSFLMIVFVRVFGYDFLHASASTKI-------VNLATNVAAL 190

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +     G +  ++         +     S +       F+ K F +  L + + 
Sbjct: 191 LLLAAKGHVWWQLGLVMAVANVLGNQAGSYLALKHGSRFVRKVFIVVVLALILK 244


>gi|91217453|ref|ZP_01254412.1| hypothetical protein P700755_19587 [Psychroflexus torquis ATCC
           700755]
 gi|91184338|gb|EAS70722.1| hypothetical protein P700755_19587 [Psychroflexus torquis ATCC
           700755]
          Length = 122

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 8/124 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI-APT 81
           I  ++V   ++G LSG+ GVGGG+VMVP++               H A GTSL V+  P 
Sbjct: 6   ILALVVIGLIAGFLSGILGVGGGVVMVPLMILLLGF-------SQHQAQGTSLAVLAVPV 58

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ +   + + G++N +       +  I   + S +   +D+  L + F I  +++G  M
Sbjct: 59  TLAAAYNYYQDGSLNWRYALVMALMFVIGGYLGSKLAISLDEKVLKRIFGIVLVVLGFRM 118

Query: 142 LKRD 145
           +   
Sbjct: 119 IFAK 122



 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 12/123 (9%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRI 215
               + G++ GFLSG LGVGGG+    LM L  G S ++A  TS  V   +A P  L   
Sbjct: 7   LALVVIGLIAGFLSGILGVGGGVVMVPLMILLLGFSQHQAQGTSLAV---LAVPVTLAAA 63

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           Y+ +          G +N    L++  + ++   L +KL+  + +K L   F +++    
Sbjct: 64  YNYYQD--------GSLNWRYALVMALMFVIGGYLGSKLAISLDEKVLKRIFGIVLVVLG 115

Query: 276 FVF 278
           F  
Sbjct: 116 FRM 118


>gi|218780369|ref|YP_002431687.1| hypothetical protein Dalk_2526 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761753|gb|ACL04219.1| protein of unknown function DUF81 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 387

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 48/116 (41%), Gaps = 9/116 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+  F    L+   G+GGG + VP L+           + M +  GTS   +    ++S 
Sbjct: 264 IIGGFCIAGLASFLGIGGGFLFVPFLTSI-------AGLPMFLVAGTSALTVFVGMIISI 316

Query: 87  MEHR--RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +   +  TI   ++   +  + + +++      ++   +L + F +  L +G+ 
Sbjct: 317 FTYMVVQGVTIYWPLIGVELIGIFVGSMIGPRTSKYIPDIWLKRLFVVLALYVGLR 372



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 39/125 (31%), Gaps = 11/125 (8%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLV 213
           +  V  I G     L+  LG+GGG      +    G  ++    TSA    +    ++  
Sbjct: 259 NPIVPIIGGFCIAGLASFLGIGGGFLFVPFLTSIAGLPMFLVAGTSALTVFVGMIISIFT 318

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            +                +    + + L    + + +  + S  I   +L   F ++   
Sbjct: 319 YMVVQGVT----------IYWPLIGVELIGIFVGSMIGPRTSKYIPDIWLKRLFVVLALY 368

Query: 274 TSFVF 278
               +
Sbjct: 369 VGLRY 373


>gi|294339960|emb|CAZ88323.1| putative permease [Thiomonas sp. 3As]
          Length = 268

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 57/261 (21%), Positives = 102/261 (39%), Gaps = 23/261 (8%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  D  +    L +V+    G   GL G GG ++ VP+L      +G  +    HV +GT
Sbjct: 1   MLADLTLTQHILSVVSGVAVGFTLGLIGGGGSILAVPLLLYL---VGYPNP---HVVIGT 54

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +   ++  + ++ + H R G +  K    +  +  I   + S +   VD   L   FAI 
Sbjct: 55  TALAVSINAYLNLIPHARAGNVRWKEAVIFAIIGAIAAYIGSTLGKAVDGKKLLFLFAIL 114

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKY------IWGMVTGFLSGALGVGGGIFTNLLMLF 187
            L++  LM++  ++    +   N  ++      +   + G LSG  G+GGG      ++F
Sbjct: 115 MLVIAALMIRPKKVKPG-EMEGNPGQFSMWKLVVSAAIVGTLSGFFGIGGGFLIVPGLVF 173

Query: 188 -YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
             G  +  A  +S            +    SG     L  W++  + I      +   + 
Sbjct: 174 ATGMPMLAAVGSSLFSEGTFGLTTAVNYASSG-----LLDWTVAGLYI---AGGIAGGVF 225

Query: 247 ITPLATKLSYMIGKKYLTIGF 267
              LAT L     K  L + F
Sbjct: 226 GARLATHLGKS-SKGTLNLIF 245



 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 10/131 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++V++ + GTLSG FG+GGG ++VP L  A         + M  A+G+SL       + +
Sbjct: 145 LVVSAAIVGTLSGFFGIGGGFLIVPGLVFA-------TGMPMLAAVGSSLFSEGTFGLTT 197

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV---DKSFLNKAFAIFCLLMGILML 142
            + +   G ++  +   +I       V  + + +H+    K  LN  FA    ++   M+
Sbjct: 198 AVNYASSGLLDWTVAGLYIAGGIAGGVFGARLATHLGKSSKGTLNLIFAALVAVVAAYMI 257

Query: 143 KRDRLYCERKF 153
            ++        
Sbjct: 258 YKNMSAFGIHL 268


>gi|225629290|ref|ZP_03787323.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|225615786|gb|EEH12835.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
          Length = 330

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 89/273 (32%), Gaps = 56/273 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G LSGLFGVGGG ++ P+L           +I   +A+ T    +  +S
Sbjct: 38  MLVLLGMGAAVGFLSGLFGVGGGFLITPLLIFY--------NIPPAIAVATGANQVIASS 89

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
           V   + H +  T+++K+    +    + +++   + S +         ++  +  F   +
Sbjct: 90  VSGALAHFKRRTLDIKLGLFLVAGGILGSLIGIFVFSWLRDLGQLDLIVSILYVFFLGTI 149

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R      +         G   
Sbjct: 150 GGLMLVESVQALRRAKKGQGGAVRRSGQHTWIHRLPFKMRFRASTIYVSVIPVLGIGFFI 209

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G LS  +GVGGG      +++           TS      +     +++  +        
Sbjct: 210 GLLSSVMGVGGGFIMVPALIYLLHVPTNVVVGTSLFQITFVTAFTTVMQATTNQS----- 264

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 ++I    +++   ++      +    +
Sbjct: 265 ------IDIVLAFLLMVGGVIGAQYGARAGRKL 291


>gi|171463247|ref|YP_001797360.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192785|gb|ACB43746.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 119

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 7/96 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I++  L G L G+ GVGGG +M P+L+  F        +    A+GT L   A T    
Sbjct: 11  FIISGALVGLLVGITGVGGGSLMTPLLTIIF-------GVAPTTAVGTDLAFAAITKGFG 63

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV 121
              HR HG ++  I++        T + + L + +V
Sbjct: 64  TAAHRLHGNVHWDIVRLLCIGSLTTAIASILALKYV 99


>gi|146183328|ref|XP_001025893.2| hypothetical protein TTHERM_00713420 [Tetrahymena thermophila]
 gi|146143638|gb|EAS05648.2| hypothetical protein TTHERM_00713420 [Tetrahymena thermophila
           SB210]
          Length = 505

 Score = 52.8 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 59/146 (40%), Gaps = 19/146 (13%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++ Y+ + I+       L+ + G+GGG+V VP+L              +  A   S  +
Sbjct: 44  EIISYVLISIIVG-----LANVGGLGGGIVKVPILVILLNF-------SVKEATFLSYPI 91

Query: 78  IAPTSVMSFM-----EHRRHGT--INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +    + + +      H R     I+  ++   +  + + TVV  LM   + +  L   F
Sbjct: 92  LLGGVLSNAILLISQRHPRKDKPIIDFDLVLILVPTVLLGTVVGILMNVIISEIILTSVF 151

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDN 156
            +F  L+ + +  + R   +++  D 
Sbjct: 152 MLFMCLVCVYLFMKARDIQQKQQEDK 177



 Score = 43.5 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 42/93 (45%), Gaps = 8/93 (8%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ ++   +G+++G+ G+G GL+++PVL                V   TS  +       
Sbjct: 368 ILSLSGLAAGSITGMLGMGSGLIILPVLLSL--------GCHTRVCSSTSGFMYLFIGGT 419

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLM 117
           S +     G ++ K++  + F+  I  ++ S +
Sbjct: 420 SIIYVLTEGILSYKMILFYAFLALIGGLLFSNI 452


>gi|256826924|ref|YP_003150883.1| putative permease [Cryptobacterium curtum DSM 15641]
 gi|256583067|gb|ACU94201.1| predicted permease [Cryptobacterium curtum DSM 15641]
          Length = 251

 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 76/202 (37%), Gaps = 15/202 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++   +FL+G +  + G GGGL+ +P    A         + +H A+GT+    +  +
Sbjct: 3   FLIVCPLAFLAGFVDAIAG-GGGLISLPAFLFA--------GLPVHAAIGTNKLSASMGT 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++ + +   G +   +    I +  + +   S +    D +       +    +   +L
Sbjct: 54  AVATIRYALSGYMVWPLAGVGIAMGLLGSWSGSNLALLTDDTAFKLIMLVILPFVAFHVL 113

Query: 143 KRDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKAT 196
           +   L  +        P   +  I   V G   G  G G G F  LL+   G   I  A 
Sbjct: 114 RTKDLSAQADHPYSLVPSLVITGIIAGVVGIYDGFYGPGTGTFLMLLLTAVGHQDIRCAA 173

Query: 197 ATSAGVSALIAFPALLVRIYSG 218
            T+  ++       L+V + +G
Sbjct: 174 GTTKAINIATNISGLVVFLVNG 195


>gi|288573776|ref|ZP_06392133.1| protein of unknown function DUF81 [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288569517|gb|EFC91074.1| protein of unknown function DUF81 [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 231

 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 81/222 (36%), Gaps = 32/222 (14%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           MH A  T+  ++   S+ + +  +++ +++  +      V  ++ +             L
Sbjct: 1   MHEAATTAQFILFFASMAAMIVFQKNKSVSWVLAVLVGVVTALSALGGGYFSHLFSGFTL 60

Query: 127 NKAFAIFCLLMGILMLK-------------------RDRLYCERKFPDNYVKYIWGMVTG 167
              F++  ++ GI+ML                    R     E    + ++     ++TG
Sbjct: 61  KIVFSLLLMIAGIVMLLPVAERRASTEVRRLGVIRIRSGAGLETYNVNMWIALPVAILTG 120

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           F SG +GV GG F   LM+F  G  ++ A  T++ + A+ AF         G        
Sbjct: 121 FGSGMVGVSGGSFLVPLMVFACGVPMHTAVGTASILIAITAFMGFAGHAAQGDFNAS--- 177

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
                      + +  ++     L  +++     K+L   F+
Sbjct: 178 ---------WAIPLAVVTAFGGILGGRMALSAKPKHLKKLFA 210



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 32/91 (35%)

Query: 54  KAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV 113
               LM     + MH A+GT+  +IA T+ M F  H   G  N         V     ++
Sbjct: 133 FLVPLMVFACGVPMHTAVGTASILIAITAFMGFAGHAAQGDFNASWAIPLAVVTAFGGIL 192

Query: 114 TSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              M        L K FA    L  + M+  
Sbjct: 193 GGRMALSAKPKHLKKLFAYTNWLAALFMIVN 223


>gi|298242827|ref|ZP_06966634.1| protein of unknown function DUF81 [Ktedonobacter racemifer DSM
           44963]
 gi|297555881|gb|EFH89745.1| protein of unknown function DUF81 [Ktedonobacter racemifer DSM
           44963]
          Length = 282

 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 84/259 (32%), Gaps = 48/259 (18%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+LS AF        + +  A+G S+  I  TS  S   + R    N+++         
Sbjct: 34  VPMLSLAF-------GLPIQYAIGASVIAIIATSSGSAAAYVRDRLSNIRVGMFLETATV 86

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-------------------------- 142
              +V +L+ + V    L   F I  L+  + +L                          
Sbjct: 87  SGAIVGALLTTIVAPQLLYIIFGIVLLISLLPILVKLGEELPQNVKNDRLATTLSLASSY 146

Query: 143 --KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATS 199
             KR       +  +    ++   + G LSG LG+G G+F  L M       +  +T TS
Sbjct: 147 PDKRLGKEVAYEVTNTGWGFLVMCIAGCLSGLLGIGSGVFKVLAMDTIMRIPMKVSTTTS 206

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +  +    +  +    G     +             L IL  S     +  ++  ++ 
Sbjct: 207 NFMIGVTGAASASIYFARGDVHPLIAA--------PVALGILAGSF----VGARILPLMK 254

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              L   F  ++   +   
Sbjct: 255 NTTLRKIFIPVLSLIALQM 273



 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 7/119 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
              +   ++G LSGL G+G G+  V  +    +       I M V+  TS  +I  T   
Sbjct: 164 WGFLVMCIAGCLSGLLGIGSGVFKVLAMDTIMR-------IPMKVSTTTSNFMIGVTGAA 216

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           S   +   G ++  I       +   + V + ++  +  + L K F     L+ + M+ 
Sbjct: 217 SASIYFARGDVHPLIAAPVALGILAGSFVGARILPLMKNTTLRKIFIPVLSLIALQMVL 275


>gi|145595670|ref|YP_001159967.1| hypothetical protein Strop_3155 [Salinispora tropica CNB-440]
 gi|145305007|gb|ABP55589.1| protein of unknown function DUF81 [Salinispora tropica CNB-440]
          Length = 321

 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 72/202 (35%), Gaps = 14/202 (6%)

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T++ + + H R G ++ ++++       +     +  +S +  +      A     +G  
Sbjct: 54  TTLAAGVAHWRFGNVDWRVVRRIAVPGALGAFAGATFLSALSTAAAAPWMAAILFTLGAY 113

Query: 141 MLKRDRLYCERKFPDNYVK----YIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKA 195
           +L R       +     ++       G+V GF+    G G G      +L  G     K 
Sbjct: 114 LLVRFARPLRTERRAGRLRGRFLSPLGLVAGFVDATGGGGWGPVATPALLVSGRLEPRKV 173

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             +      L+A  A +  +            S GF+ +  VL +L   ++  P+A  L 
Sbjct: 174 IGSVDTAEFLVAGAASVGFLIG--------LGSEGFL-LPMVLALLAGGLIAAPVAAWLI 224

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
            ++  + L      ++  T+  
Sbjct: 225 RLVPAQLLGAVVGGVIVLTNAR 246


>gi|26987228|ref|NP_742653.1| hypothetical protein PP_0487 [Pseudomonas putida KT2440]
 gi|24981868|gb|AAN66117.1|AE016240_2 membrane protein, putative [Pseudomonas putida KT2440]
          Length = 265

 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 99/261 (37%), Gaps = 28/261 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++   +F++G +  + G GGGL +VP     F L+G+       VA+G    V    +
Sbjct: 20  VLILGAIAFVAGFVDSIAG-GGGLFLVPG----FLLVGMPP----QVALGQEKLVSTLGT 70

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL-NKAFAIFCLLMGILM 141
           + +      +  +  ++    +    +   + + +I  + +  +     A+  L + I +
Sbjct: 71  LAAIRNFLANSKMVWQVALVGVPFSLLGAYLGAHLIVSISQETVGKIILALIPLGILIFL 130

Query: 142 LKRDRLYCERKFPDNYVKYIW---GMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
             +DR   ER+     +  +     +  GF  G  G G G    +         +  ++A
Sbjct: 131 TPKDRPVEERELSSRMLFTVVPLTCLAIGFYDGFFGPGTGSMFIIAFHYLLRMDLVSSSA 190

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            S   +      AL+  + +G             V + A+ ++   +IL   L + L+  
Sbjct: 191 NSKTFNFASNIGALVAFVSAGKV-----------VYLLALPLVAC-NILGNHLGSSLALR 238

Query: 258 IGKKYLTI--GFSMIMFTTSF 276
            G   +     FSM+   TS 
Sbjct: 239 KGNDVVRKALVFSMLCLFTSL 259


>gi|302381842|ref|YP_003817665.1| hypothetical protein Bresu_0727 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302192470|gb|ADL00042.1| protein of unknown function DUF81 [Brevundimonas subvibrioides ATCC
           15264]
          Length = 267

 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 98/262 (37%), Gaps = 25/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  ++  L G   GL G GG ++ VP++      +G+  +   HVA+GTS   +A  + 
Sbjct: 9   LLGALSGSLVGFTLGLVGGGGSILAVPLMVYL---VGVPSA---HVAIGTSALAVAANAA 62

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              M H R+GT+  +    +           S +    D   L   FAI  +++G+LML+
Sbjct: 63  AGLMNHARNGTVKWRCAGMYAGAGVAGAFAGSTVGKAFDGGKLLFLFAIVMVVVGVLMLR 122

Query: 144 RD----RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATAT 198
                     E    +      +G+ TG  SG  G+GGG      ++   G  I  A  +
Sbjct: 123 GRGDVGNPGAECNRENAPKVLGFGLGTGVFSGFFGIGGGFLIVPGLVASTGMPILNAIGS 182

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S            L   +SG             ++     + +   +  +     ++  +
Sbjct: 183 SLVAVTAFGLTTALNYAFSGL------------IDWPLAGVFILGGLAGSFGGALVAKKL 230

Query: 259 G--KKYLTIGFSMIMFTTSFVF 278
                 LT  FS+++F  +   
Sbjct: 231 SGTTGLLTTVFSILIFVVAAYM 252



 Score = 39.7 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS--FLN 127
           A+G+SL  +    + + + +   G I+  +   +I      +   +L+   +  +   L 
Sbjct: 179 AIGSSLVAVTAFGLTTALNYAFSGLIDWPLAGVFILGGLAGSFGGALVAKKLSGTTGLLT 238

Query: 128 KAFAIFCLLMGILMLKRD 145
             F+I   ++   ML + 
Sbjct: 239 TVFSILIFVVAAYMLWKS 256


>gi|313834929|gb|EFS72643.1| integral membrane family protein [Propionibacterium acnes HL056PA1]
          Length = 241

 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 88/240 (36%), Gaps = 21/240 (8%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+M+P L     L+G+     +   +GT+       ++ + +   R    + ++   
Sbjct: 11  GGGLIMLPSL-----LVGLPTETPVATIVGTNKVAQVVGNLTAGVGDLRKQRPDWRMFLW 65

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD---NYVK 159
              +  +  V+ + +++++ ++       +  +++GI   +R  L             + 
Sbjct: 66  TAVLAGLGAVLGARIVTYMSRAVYTPILLVVLVIIGIYTWRRPSLGAGHNGEGGKHPILV 125

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
            I G+  G   GA+G G G F  L  +   G S  KA+  +   +A+     +       
Sbjct: 126 PIIGLFLGCYDGAIGPGVGTFWVLTYVAVGGYSFLKASGMAKICNAVTNLVTITTLAIH- 184

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                      G V       ++  ++L   +  + +   G  ++   F ++    +   
Sbjct: 185 -----------GHVWWHIAWPLVISNVLGGLIGARTAMKHGNGFVRTMFLIVTSVLAVRM 233


>gi|283852259|ref|ZP_06369531.1| protein of unknown function DUF81 [Desulfovibrio sp. FW1012B]
 gi|283572341|gb|EFC20329.1| protein of unknown function DUF81 [Desulfovibrio sp. FW1012B]
          Length = 384

 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 8/118 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +   +   ++   GVGGG ++VP L+   QL        M++A GTS   +    V S 
Sbjct: 263 FLGGVVISAVAAFLGVGGGFLLVPFLTSVTQL-------PMYLAAGTSALAVLVGMVTSI 315

Query: 87  MEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +     GT I    +   +  + + +++  +   +    +L + F +  L +G+  L 
Sbjct: 316 ITLLGKGTPIEWHFIGLELAGVAVGSIIGPMTSKYFSDVWLKRLFIVLALYVGVGYLL 373



 Score = 40.4 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 42/122 (34%), Gaps = 12/122 (9%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLV 213
           +  + ++ G+V   ++  LGVGGG      +       +Y A  TSA    +    +++ 
Sbjct: 258 NPLIPFLGGVVISAVAAFLGVGGGFLLVPFLTSVTQLPMYLAAGTSALAVLVGMVTSIIT 317

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            +  G  +       +G      +  +   SI    +    S      +L   F ++   
Sbjct: 318 LLGKGTPIE---WHFIG----LELAGVAVGSI----IGPMTSKYFSDVWLKRLFIVLALY 366

Query: 274 TS 275
             
Sbjct: 367 VG 368


>gi|257418226|ref|ZP_05595220.1| predicted protein [Enterococcus faecalis T11]
 gi|257160054|gb|EEU90014.1| predicted protein [Enterococcus faecalis T11]
          Length = 259

 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 103/264 (39%), Gaps = 26/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  FLS T+  L G+GGG+++ PVL                +A  +S+ V  
Sbjct: 1   MRVLLIYFITIFLSNTVGALSGMGGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFV 54

Query: 80  PTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAI 132
             S+ S  +  ++G  I  K      F   +  ++  L+++        ++      + I
Sbjct: 55  M-SISSTYKQYQNGVQIEWKKAASISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYII 113

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGAS 191
             + + +++L               +  I G+  G LS  LG+GGG      L+LF+G  
Sbjct: 114 MLVTLVLVLLYNQFSNWHLHLNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMD 173

Query: 192 IYKATATSAGVSALIAFPALL-VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           I  AT  S           L  + + +G+ +            +  +  I+P ++    +
Sbjct: 174 IKSATVYSIITIFFSQLAKLGNIGLTTGFAVFD----------LTMLWAIIPAALFGGYV 223

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTT 274
               S  + ++ +   +S+++F  
Sbjct: 224 GGLFSKKLSQQRVAQIYSLVVFLV 247


>gi|29375085|ref|NP_814238.1| hypothetical protein EF0454 [Enterococcus faecalis V583]
 gi|227519116|ref|ZP_03949165.1| membrane protein [Enterococcus faecalis TX0104]
 gi|255973520|ref|ZP_05424106.1| conserved hypothetical protein [Enterococcus faecalis T2]
 gi|256761375|ref|ZP_05501955.1| conserved hypothetical protein [Enterococcus faecalis T3]
 gi|256852428|ref|ZP_05557804.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|256959647|ref|ZP_05563818.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
 gi|257080850|ref|ZP_05575211.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|257415170|ref|ZP_05592164.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
 gi|300862050|ref|ZP_07108130.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
 gi|29342544|gb|AAO80309.1| conserved hypothetical protein [Enterococcus faecalis V583]
 gi|227073464|gb|EEI11427.1| membrane protein [Enterococcus faecalis TX0104]
 gi|255966392|gb|EET97014.1| conserved hypothetical protein [Enterococcus faecalis T2]
 gi|256682626|gb|EEU22321.1| conserved hypothetical protein [Enterococcus faecalis T3]
 gi|256712282|gb|EEU27314.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|256950143|gb|EEU66775.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
 gi|256988880|gb|EEU76182.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|257156998|gb|EEU86958.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
 gi|300848575|gb|EFK76332.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
 gi|327534192|gb|AEA93026.1| hypothetical protein OG1RF_10339 [Enterococcus faecalis OG1RF]
          Length = 259

 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 103/264 (39%), Gaps = 26/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  FLS T+  L G+GGG+++ PVL                +A  +S+ V  
Sbjct: 1   MRVLLIYFITIFLSNTVGALSGMGGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFV 54

Query: 80  PTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAI 132
             S+ S  +  ++G  I  K      F   +  ++  L+++        ++      + I
Sbjct: 55  M-SISSTYKQYQNGVQIEWKKAASISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYII 113

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGAS 191
             L + +++L               +  I G+  G LS  LG+GGG      L+LF+G  
Sbjct: 114 MLLTLVLVLLYNQFSNWHLHLNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMD 173

Query: 192 IYKATATSAGVSALIAFPALL-VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           I  AT  S           L  + + +G+ +            +  +  I+P ++    +
Sbjct: 174 IKSATVYSIITIFFSQLAKLGNIGLTTGFAVFD----------LTMLWAIIPAALFGGYV 223

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTT 274
               S  + ++ +   +S+++F  
Sbjct: 224 GGLFSKKLSQQRVAQIYSLVVFLV 247


>gi|326433239|gb|EGD78809.1| hypothetical protein PTSG_01784 [Salpingoeca sp. ATCC 50818]
          Length = 589

 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 12/112 (10%)

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
                 G  +  +G+GGG+  + +ML  G      T TS+ +    +    L  +  G  
Sbjct: 449 ALAFFAGVAAAMMGIGGGMIKSPIMLAMGLQPQVVTTTSSFMIIFTSSATTLQYLILG-- 506

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
              L P  LG        I++ +      +  ++   I  KY    F + + 
Sbjct: 507 --KLKPQQLG--------IVMSMGFAGAVVGQRVVNYIIAKYKKQSFLIFLL 548



 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 50/106 (47%), Gaps = 8/106 (7%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           +F +G  + + G+GGG++  P++      MG+   +       TS  +I  TS  + +++
Sbjct: 451 AFFAGVAAAMMGIGGGMIKSPIML----AMGLQPQVV----TTTSSFMIIFTSSATTLQY 502

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
              G +  + L   + +     VV   +++++   +  ++F IF L
Sbjct: 503 LILGKLKPQQLGIVMSMGFAGAVVGQRVVNYIIAKYKKQSFLIFLL 548


>gi|218461099|ref|ZP_03501190.1| hypothetical protein RetlK5_16990 [Rhizobium etli Kim 5]
          Length = 232

 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 74/218 (33%), Gaps = 26/218 (11%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  L  ++    G L G+ GVGGG +M P+L   F        +    A+GT L   A
Sbjct: 1   MTFEPLYSLSGLFVGALVGITGVGGGSLMTPLLVLLF-------GVHPATAVGTDLLYAA 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIF 133
            T       H  HG IN KI+           V+   +++ VD       + +  A    
Sbjct: 54  ITKTAGTAVHGMHGRINWKIVGSLAAGSVPAAVLMLWLLAGVDRKSIGVTNTITVALGWL 113

Query: 134 CLLMGILMLKRDRL-----------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++  I+++ R  +              R      +  I G   G L     VG G    
Sbjct: 114 LVMTAIMLVFRGSILELARRAIGDRTPPRPTTILILTVILGFCLGVLVTLTSVGAGALGV 173

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSG 218
            ++L      ++ +   +    +  +     +     G
Sbjct: 174 TILLVLYPRLNVREIVGSDIVHAVPLTLIGGMGYWLIG 211


>gi|159041510|ref|YP_001540762.1| hypothetical protein Cmaq_0940 [Caldivirga maquilingensis IC-167]
 gi|157920345|gb|ABW01772.1| protein of unknown function DUF81 [Caldivirga maquilingensis
           IC-167]
          Length = 469

 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 49/266 (18%), Positives = 89/266 (33%), Gaps = 52/266 (19%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +V+ PVL+           I M  A G++L     TS  S   + +    N +I    + 
Sbjct: 34  VVLTPVLTLFV-------GIPMMYASGSALISTIATSAGSASVYVKRRLANDRIGISLVT 86

Query: 106 VLPITTVVTSLMISHVDKSFLNKA----FAIFCLLMGILMLKRDR---LYCERKFPDNYV 158
                 +V SL  ++V +  L       F I  LL  I  ++R                +
Sbjct: 87  ATSGGAIVGSLTANYVYEHGLTWIIYTVFGIVLLLSIIPTVQRSTCELPPLRNPDKTTKL 146

Query: 159 KYIWG-------------------------MVTGFLSGALGVGGGIFTNLLMLF-YGASI 192
             ++G                            GF+SG LG+G G    L M +     +
Sbjct: 147 LRLYGVCYDPALKIWYKYWGVRWWLGELIMFFAGFISGLLGIGSGALKVLGMDWAMNLPM 206

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             +T TS  +  + A  +  +  + G+           F+ + A + +L  S+    + T
Sbjct: 207 KVSTTTSNFMIGVTAATSSSLYWHFGYIQP--------FIAVAAAVGVLMGSM----IGT 254

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +L   I  + +   F  ++       
Sbjct: 255 RLLIRITNRQIRWVFVGVLAYFGLRM 280



 Score = 48.9 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 51/139 (36%), Gaps = 7/139 (5%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G +SGL G+G G + V  +  A        ++ M V+  TS  +I  T+  S   + 
Sbjct: 177 FFAGFISGLLGIGSGALKVLGMDWAM-------NLPMKVSTTTSNFMIGVTAATSSSLYW 229

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
             G I   I       + + +++ + ++  +    +   F       G+ M  R      
Sbjct: 230 HFGYIQPFIAVAAAVGVLMGSMIGTRLLIRITNRQIRWVFVGVLAYFGLRMTLRGLGKEH 289

Query: 151 RKFPDNYVKYIWGMVTGFL 169
                +  + I   V   +
Sbjct: 290 LLPLTSLERNIVAAVFSAI 308


>gi|256957663|ref|ZP_05561834.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|257080118|ref|ZP_05574479.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|257085808|ref|ZP_05580169.1| conserved hypothetical protein [Enterococcus faecalis D6]
 gi|294780688|ref|ZP_06746049.1| putative membrane protein [Enterococcus faecalis PC1.1]
 gi|256948159|gb|EEU64791.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|256988148|gb|EEU75450.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|256993838|gb|EEU81140.1| conserved hypothetical protein [Enterococcus faecalis D6]
 gi|294452298|gb|EFG20739.1| putative membrane protein [Enterococcus faecalis PC1.1]
          Length = 259

 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 103/264 (39%), Gaps = 26/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  FLS T+  L G+GGG+++ PVL                +A  +S+ V  
Sbjct: 1   MRVLLIYFITIFLSNTVGALSGMGGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFV 54

Query: 80  PTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAI 132
             S+ S  +  ++G  I  K      F   +  ++  L+++        ++      + I
Sbjct: 55  M-SISSTYKQYQNGVQIEWKKAASISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYII 113

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGAS 191
             L + +++L               +  I G+  G LS  LG+GGG      L+LF+G  
Sbjct: 114 MLLTLVLVLLYNQFSNWHLHLNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMD 173

Query: 192 IYKATATSAGVSALIAFPALL-VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           I  AT  S           L  + + +G+ +            +  +  I+P ++    +
Sbjct: 174 IKSATVYSIITIFFSQLAKLGNIGLTTGFAVFD----------LTMLWAIIPAALFGGYV 223

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTT 274
               S  + ++ +   +S+++F  
Sbjct: 224 GGLFSKKLSQQRVAQIYSLVVFLV 247


>gi|11499156|ref|NP_070390.1| hypothetical protein AF1561 [Archaeoglobus fulgidus DSM 4304]
 gi|2648990|gb|AAB89677.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 285

 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 98/283 (34%), Gaps = 48/283 (16%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ V +F  G L+ + GVGGG++ VP++S  F          +    G  L V    ++
Sbjct: 12  VILFVFTFFLGILAVMAGVGGGVLFVPLVSGFFPF-------HLDYVRGAGLFVALTGAL 64

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +     + G  N+++      +    +++ +L+   +  +       I  L +  +M+ 
Sbjct: 65  AAGPGLLKRGLANLRLAMPLALIASTCSIIGALIGLALPTNITQTLLGITILFISFVMVT 124

Query: 144 RDR---LYCERKFPDNYVKYIWGM-------------------------VTGFLSGALGV 175
             R      E+    + +  I+G+                           G ++G  G+
Sbjct: 125 SKRVEFPKVEKADKISQMLGIYGIYYEESMGKEIEWKVHRTIPSMILFAFIGIIAGMFGL 184

Query: 176 GGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           G G     ++  + G  +  A  TS  + ++    A  V + +G  +          + I
Sbjct: 185 GAGWANVPVLNLFMGTPLKIAAGTSKFLLSITDTSAAWVYLNNGSVIP--------LITI 236

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + L I+  S     +  ++      K +      ++      
Sbjct: 237 PSCLGIMLGSY----VGVRVLAKASPKMIRSIVIAVLIFAGLR 275



 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
              G ++G+FG+G G   VPVL+             + +A GTS  +++ T   +   + 
Sbjct: 173 AFIGIIAGMFGLGAGWANVPVLNLFM-------GTPLKIAAGTSKFLLSITDTSAAWVYL 225

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +G++   I       + + + V   +++      +        +  G+  L +
Sbjct: 226 NNGSVIPLITIPSCLGIMLGSYVGVRVLAKASPKMIRSIVIAVLIFAGLRSLLK 279


>gi|256963222|ref|ZP_05567393.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
 gi|256953718|gb|EEU70350.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
          Length = 259

 Score = 52.8 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 103/264 (39%), Gaps = 26/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  FLS T+  L G+GGG+++ PVL                +A  +S+ V  
Sbjct: 1   MRVLLIYFITIFLSNTVGALSGMGGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFV 54

Query: 80  PTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAI 132
             S+ S  +  ++G  I  K      F   +  ++  L+++        ++      + I
Sbjct: 55  M-SISSTYKQYQNGVKIEWKKAASISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYII 113

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGAS 191
             L + +++L               +  I G+  G LS  LG+GGG      L+LF+G  
Sbjct: 114 MLLTLVLVLLYNQFSNWHLHLNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMD 173

Query: 192 IYKATATSAGVSALIAFPALL-VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           I  AT  S           L  + + +G+ +            +  +  I+P ++    +
Sbjct: 174 IKSATVYSIITIFFSQLAKLGNIGLTTGFAVFD----------LTMLWAIIPAALFGGYV 223

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTT 274
               S  + ++ +   +S+++F  
Sbjct: 224 GGLFSKKLSQQRVAQIYSLVVFLV 247


>gi|237816899|ref|ZP_04595891.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|237787712|gb|EEP61928.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
          Length = 330

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 89/273 (32%), Gaps = 56/273 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G LSGLFGVGGG ++ P+L           +I   +A+ T    +  +S
Sbjct: 38  MLVLLGMGAAVGFLSGLFGVGGGFLITPLLIFY--------NIPPAIAVATGANQVIASS 89

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
           V   + H +  T+++K+    +    + +++   + S +         ++  +  F   +
Sbjct: 90  VSGALAHFKRRTLDIKLGLFLVAGGILGSLIGIFVFSWLRDLGQLDLIVSILYVFFLGTI 149

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R      +         G   
Sbjct: 150 GGLMLVESVQALRRAKKGQGGAVRRSGQHTWIHRLPFKMRFRASTIYVSVIPVLGIGFFI 209

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G LS  +GVGGG      +++           TS      +     +++  +        
Sbjct: 210 GLLSSVMGVGGGFIMVPALIYLLHVPTNVVVGTSLFQITFVTAFTTVMQATTNQS----- 264

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 ++I    +++   ++      +    +
Sbjct: 265 ------IDIVLAFLLMVGGVIGAQYGARAGRKL 291


>gi|293568773|ref|ZP_06680087.1| hypothetical protein EfmE1071_1548 [Enterococcus faecium E1071]
 gi|291588490|gb|EFF20324.1| hypothetical protein EfmE1071_1548 [Enterococcus faecium E1071]
          Length = 278

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 24/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  V   L+ T+  + G+GGG+++ P+L        I       ++  +++ V   + V
Sbjct: 4   LIYFVVIVLANTVGAISGMGGGVLIKPILDL------IGAHSVAGISFYSTVAVFTMSIV 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------LNKAFAIFCLL 136
            +  +     ++N +I+        +  VV +++     + F       L + F     L
Sbjct: 58  STVRQVSSEKSLNWQIVGWVSSGAVVGGVVGNIVFEVFLQLFENEKHVQLIQIFLTVLTL 117

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           +            +          I G V GFL+  LG+GGG     LLML +   I +A
Sbjct: 118 V-FAFFYTKHHQPKFHLTSWTWYLICGGVLGFLASFLGIGGGPVNVSLLMLMFALPIKEA 176

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           T  S           L+    +          S    ++  +  ++P +++      + S
Sbjct: 177 TLYSLSTIFFSQLAKLVTIALTS---------SFMRFDLSMLFYVIPAAVIGGLWGARFS 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
            ++  K +T  F  I+     +
Sbjct: 228 RVLSPKKVTFIFQAIVIVVLLI 249



 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 10/124 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              ++   + G L+   G+GGG V V +L   F       ++ +  A   SL  I  + +
Sbjct: 137 TWYLICGGVLGFLASFLGIGGGPVNVSLLMLMF-------ALPIKEATLYSLSTIFFSQL 189

Query: 84  MSFMEHRRHGTI---NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
              +      +    ++ +L   I    I  +  +     +    +   F    +++ ++
Sbjct: 190 AKLVTIALTSSFMRFDLSMLFYVIPAAVIGGLWGARFSRVLSPKKVTFIFQAIVIVVLLI 249

Query: 141 MLKR 144
            L  
Sbjct: 250 NLYN 253


>gi|15384028|gb|AAK96106.1|AF393466_45 permease [uncultured crenarchaeote 74A4]
          Length = 257

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            SV S + + +   I   +      +    T++ +++ +          F    +   + 
Sbjct: 54  NSVASTISYSKQKRIEYPLGLKLGLIATPGTILGAIISTDAAPDLFKILFGFILIASSVY 113

Query: 141 MLKRDRLYCERKFPDNYVKYIW---GMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKAT 196
           +L R ++    K     +           G +S   G+GGGI    LM+   G S+ KA 
Sbjct: 114 ILLRKQIESRDKIISKQLIIFIIGTSFFAGIVSSFFGIGGGIIFVPLMVVGMGMSMKKAA 173

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            TS  +    +   ++V    G        +            +   S     +  KLS 
Sbjct: 174 PTSQLILLFASLSGIIVHSILGHPDFLQSGF------------LAIGSFFGGLVGAKLSL 221

Query: 257 MIGKKYLTIGFSMIMFTTS 275
            + ++ L I  S+++   +
Sbjct: 222 SVKERNLKILISVVLLLAA 240



 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 7/125 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I  II  SF +G +S  FG+GGG++ VP++        +   + M  A  TS  ++  
Sbjct: 130 QLIIFIIGTSFFAGIVSSFFGIGGGIIFVPLMV-------VGMGMSMKKAAPTSQLILLF 182

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S+   + H   G  +               +V + +   V +  L    ++  LL    
Sbjct: 183 ASLSGIIVHSILGHPDFLQSGFLAIGSFFGGLVGAKLSLSVKERNLKILISVVLLLAAGK 242

Query: 141 MLKRD 145
           ++   
Sbjct: 243 LIFDS 247


>gi|291523096|emb|CBK81389.1| Predicted permeases [Coprococcus catus GD/7]
          Length = 258

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 100/255 (39%), Gaps = 25/255 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  I +   A   +G  +G  G+    V+ P+L      +GI      + A+G +L   
Sbjct: 3   LLFTIIVTFFAGMGAGLGTGFAGMSAAAVISPILI---TFLGISP----YTAVGIALSSD 55

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              S +S   + ++  +++K     +  + I TVV S + S V  + +         L+G
Sbjct: 56  VLASAVSAYTYGKNKNLDIKNGLIMMVTVLIFTVVGSYISSLVPSATMGNFSVFMTFLLG 115

Query: 139 ILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
           I  + R  +  +        K       I G++ GF+ G +G GGG+   L++    G  
Sbjct: 116 IKFIVRPVMTTKEAMQGVSAKKRAMQSVICGIIIGFICGFIGAGGGMMMLLILTSVLGYE 175

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           +  A  TS  +    AF   +     G    GLP  ++        ++ +  +++   +A
Sbjct: 176 LKTAVGTSVFIMTFTAFTGAVSHFAIG----GLPDPAV-------WILCIIFTLIWARIA 224

Query: 252 TKLSYMIGKKYLTIG 266
             L+     K L   
Sbjct: 225 AVLANKATPKTLNRA 239


>gi|238060185|ref|ZP_04604894.1| hypothetical protein MCAG_01151 [Micromonospora sp. ATCC 39149]
 gi|237881996|gb|EEP70824.1| hypothetical protein MCAG_01151 [Micromonospora sp. ATCC 39149]
          Length = 314

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 68/204 (33%), Gaps = 14/204 (6%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T++ + + H R G ++ +++    F   +     +  +S +         A     +G
Sbjct: 60  IGTTLAAGVAHWRFGNVDWRVVSRIAFPGALGAFAGATFLSAISTEAAAPWMAAILFTLG 119

Query: 139 ILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIY 193
             +L R     R                G+V GF+    G G G      +L  G     
Sbjct: 120 AYLLVRFSRPLRANRAAGRLRGRFLGPLGLVAGFVDATGGGGWGPVATPALLVSGRMEPR 179

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           K   +      ++A  A +  +            + GF+ +  V  +L   ++  P+A  
Sbjct: 180 KVIGSVDTAEFVVAGAASVGFLIG--------LGTEGFL-LPTVAALLIGGLIAAPIAAW 230

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           L  ++  + L      ++  T+  
Sbjct: 231 LVRIVPAQLLGAVIGGVIVLTNAR 254


>gi|326317037|ref|YP_004234709.1| hypothetical protein Acav_2230 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323373873|gb|ADX46142.1| protein of unknown function DUF81 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 267

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 52/273 (19%), Positives = 95/273 (34%), Gaps = 44/273 (16%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              + A F  G + GL GVGGG +M PVL   F        +  H+A+GT L   A T +
Sbjct: 4   LAFVFAGFAVGLIVGLTGVGGGSLMTPVLIFFF-------GVKPHLAIGTDLLFAAFTKM 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------------------- 124
              +   R   +  +++         + ++    +  +  +                   
Sbjct: 57  GGTVSLARQRLVPWRVVALLCAGSIPSALLALWALRTIGPASATAQHLMTTTLGGALLLT 116

Query: 125 ---FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-VKYIWGMVTGFLSGALGVGGGIF 180
               L KAF             R     +   P ++ +  + G + G L     VG G  
Sbjct: 117 AAATLYKAFVFSPARQAAERAARQSEGAQADRPRHWSLPVLLGALIGTLVTFTSVGAGAI 176

Query: 181 --TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
             T LLM+F    + +  A     +  +              + GL   SLG V+   + 
Sbjct: 177 GVTVLLMVFPLLPLPRVIAADIAYAVPLTL------------VAGLGHASLGSVDWPLLA 224

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            +L  S+    L ++L     ++++    S+++
Sbjct: 225 QLLAGSLPGIWLGSRLVSRAPERFIRSALSVLL 257



 Score = 42.0 bits (98), Expect = 0.087,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   L GTL     VG G + V VL   F L+ +   I   +A         P ++++ 
Sbjct: 156 VLLGALIGTLVTFTSVGAGAIGVTVLLMVFPLLPLPRVIAADIAYA------VPLTLVAG 209

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + H   G+++  +L   +        + S ++S   + F+  A ++     G  ++ 
Sbjct: 210 LGHASLGSVDWPLLAQLLAGSLPGIWLGSRLVSRAPERFIRSALSVLLAWAGAKLVL 266


>gi|258543872|ref|ZP_05704106.1| membrane protein [Cardiobacterium hominis ATCC 15826]
 gi|258520878|gb|EEV89737.1| membrane protein [Cardiobacterium hominis ATCC 15826]
          Length = 253

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 92/274 (33%), Gaps = 36/274 (13%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  + +  LI V   + G ++ + G GG  +++PVL                VA  T+  
Sbjct: 2   DLQLHHYLLISVLGVICGVINVMAG-GGSNIILPVLMMM--------GYPAQVANATNRV 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            IA  S++      + G +    L   I    I  +  +++ ++     +        L 
Sbjct: 53  GIALQSIVGVRGFLKAGKLPTHDLPGIIVPTIIGGICGAVVAAYAPHQIIKPLLLGTMLA 112

Query: 137 MGILMLKRDRLYCERK-----------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
           M  +ML    +                +   +  ++ G+  GF+   +G    +    + 
Sbjct: 113 MAAIMLFVPSVVMPPPGTVPFTVKQAGWRAWFWLWLGGVYGGFVQAGVGF---VLITAIA 169

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                 I +++A     +      AL + ++ G             V+    L++   ++
Sbjct: 170 GCLRYDIVRSSALKLVCTLFFTLVALAIFVWRGQ------------VDWTTGLVLAVGNM 217

Query: 246 LITPLATKLSYMIGKKYLT-IGFSMIMFTTSFVF 278
           +      +L+  +  K L  + F M +      F
Sbjct: 218 IGAHYGVRLAIKVKPKTLKWVMFFMTLVAVIAAF 251


>gi|114048512|ref|YP_739062.1| hypothetical protein Shewmr7_3021 [Shewanella sp. MR-7]
 gi|113889954|gb|ABI44005.1| protein of unknown function DUF81 [Shewanella sp. MR-7]
          Length = 302

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 96/261 (36%), Gaps = 21/261 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +         +   G GGG++ +PV S   F  +    +  M    G + G I   S  
Sbjct: 52  FVFLGITGAIFANATGAGGGVIFIPVFSSLNFSEVQSVSTSFMIQCFGMTAGAI---SWS 108

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVT---SLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+     H           I +    +V+    S +      S L+ +F++F +L+GI +
Sbjct: 109 SYYRRHHHHDKTWSGFIPSILLAATCSVLGLWSSQLWQLNSPSSLHTSFSLFSILLGIAI 168

Query: 142 LKRDRLYCERKFPDNYV----KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           +   +    +    N +      + G + G ++  L VG G    + ++  G     A A
Sbjct: 169 IISSQRRTLQSHRLNALDYCWLAVIGYLGGIITAWLSVGVGELLVIYLMLRGVCAKMAVA 228

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
               VSA+  + A  + +++                   VL   P +I+   LA KL+  
Sbjct: 229 IGVVVSAITVWSASPIHVFASSSHALFEL----------VLFAGPGAIIGGLLARKLALF 278

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +  K L + FS  +  T  V 
Sbjct: 279 LPVKTLKLFFSSWIILTGSVM 299



 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 6/121 (4%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           C + V  +L G ++    VG G ++V        L G+     M VA+G  +  I   S 
Sbjct: 188 CWLAVIGYLGGIITAWLSVGVGELLV----IYLMLRGV--CAKMAVAIGVVVSAITVWSA 241

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                         +++        I  ++   +   +    L   F+ + +L G +ML 
Sbjct: 242 SPIHVFASSSHALFELVLFAGPGAIIGGLLARKLALFLPVKTLKLFFSSWIILTGSVMLA 301

Query: 144 R 144
            
Sbjct: 302 N 302


>gi|89902678|ref|YP_525149.1| hypothetical protein Rfer_3919 [Rhodoferax ferrireducens T118]
 gi|89347415|gb|ABD71618.1| protein of unknown function DUF81 [Rhodoferax ferrireducens T118]
          Length = 252

 Score = 52.4 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 91/254 (35%), Gaps = 25/254 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++ +AS L+G +  + G GGGL++VP L   F       +       GT  G     +
Sbjct: 3   LFVVSLASLLAGFVDSIVG-GGGLILVPALFVTF------PNTHPATLFGTGKGASVWGT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +  +  R   +    L        I     + +++ V   FL +      L + I  +
Sbjct: 56  GFATWQFSRRVEMRWAALLPAAAAGFIAAFAGAWLVTVVSPDFLRRLLPGVLLAVLIYTV 115

Query: 143 KRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKAT 196
            R  L        +  K        G V GF  G  G G G F   L +   G     A+
Sbjct: 116 LRKELGRTHAPLFSGGKEACLAASIGAVIGFYDGFFGPGAGSFLVFLFVRVMGYDFLSAS 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++      AL++ +              G +    VL +   ++  + L T+L+ 
Sbjct: 176 AAAKLINTATNTAALILFVAK------------GHIWWHFVLAMALANVAGSLLGTRLAL 223

Query: 257 MIGKKYLTIGFSMI 270
             G  ++   F ++
Sbjct: 224 KHGTGFVRAFFIVV 237


>gi|312112968|ref|YP_004010564.1| hypothetical protein Rvan_0175 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311218097|gb|ADP69465.1| protein of unknown function DUF81 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 304

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 13/138 (9%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + V+L    +   + L++      G LSG+FGVGGG +M P+L  A         I   V
Sbjct: 1   MQVYLPIAEMPVNVLLMLGLGGAVGFLSGMFGVGGGFLMTPLLIFA--------GIPSAV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ T    +  +S+   +   R   ++ K+    +    +      L+I ++ +      
Sbjct: 53  AVATGANPLIASSITGTIAQARRKNLDTKLGLYLLGGGAVGAFWGVLIIRYLRQIGQVDL 112

Query: 125 FLNKAFAIFCLLMGILML 142
           F++  + +F   +G +ML
Sbjct: 113 FVSLLYVVFMGAVGSIML 130



 Score = 43.5 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 23/57 (40%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
            +    G   GFLSG  GVGGG     L++F G     A AT A      +    + 
Sbjct: 15  LLMLGLGGAVGFLSGMFGVGGGFLMTPLLIFAGIPSAVAVATGANPLIASSITGTIA 71


>gi|303290236|ref|XP_003064405.1| 4-toluene sulfonate uptake permease [Micromonas pusilla CCMP1545]
 gi|226454003|gb|EEH51310.1| 4-toluene sulfonate uptake permease [Micromonas pusilla CCMP1545]
          Length = 464

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 28/109 (25%), Gaps = 12/109 (11%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           Y     G   G LS   G+GG +         G +  K   T+                 
Sbjct: 28  YFTAGCGTCAGSLSALTGLGGAVVFVPTCSKLGMTAKKIVGTTVVAVTCATTAGSYAYAS 87

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           +                I A + I  +    TP    ++  I  K L  
Sbjct: 88  NNVTD------------IPAAIAIGVVGAATTPFGQMIAKRISGKTLRK 124



 Score = 40.4 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 43/128 (33%), Gaps = 10/128 (7%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
              +G+LS L G+GG +V VP        +G+         +GT++  +   +      +
Sbjct: 34  GTCAGSLSALTGLGGAVVFVPT----CSKLGMTAKKI----VGTTVVAVTCATTAGSYAY 85

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
             +   ++        V   TT    ++   +    L K      L+       + +   
Sbjct: 86  ASNNVTDIPAAIAIGVVGAATTPFGQMIAKRISGKTLRKWCGGALLMCAPTAFVKKK--T 143

Query: 150 ERKFPDNY 157
            +  P + 
Sbjct: 144 HKPVPGHP 151


>gi|171463146|ref|YP_001797259.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192684|gb|ACB43645.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 272

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 92/278 (33%), Gaps = 44/278 (15%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I +      + G L GL G GGG++ VP+L     L        +  A   SL  IA ++
Sbjct: 5   ILIAPSLGLIVGLLMGLTGAGGGILSVPLLVFVLHL-------PIADAAPISLSAIALSA 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +   R+  +  K            + +   +   +  + L   F+     +   +L
Sbjct: 58  GVGALLSLRNEILRYKAAGFMAIFGLTLSPLGLWVAQRIPNAPLLILFSCTLFFVSTRLL 117

Query: 143 KRDR------LYCERKFPDNYVKYIWGMV---TGFLSGALGVG--------------GGI 179
            + R         +R+ P   +    G +          +  G              G +
Sbjct: 118 LQARREILRLPNPKRRPPPCLLNPEVGKLDWNIPCARSLMLSGCLAGFLSGLLGVGGGFV 177

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG-WGLNGLPPWSLGFVNIGAVL 238
               L  +    +    ATS GV A+++   ++    SG   L    P+SLG     A+ 
Sbjct: 178 IVPALKRYTDLPVQSIVATSLGVLAIVSGGGVVFSAISGTLDLALATPFSLG-----ALC 232

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            ++        +   +   +    L   F+++ F  + 
Sbjct: 233 GLI--------IGRAVGKKLSGPRLQQIFALLTFGVAI 262



 Score = 37.7 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 13/117 (11%)

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA-LIAFPALLVRIYSGWG 220
            G++ G L G  G GGGI +  L++F    ++   A +A +S   IA  A +  + S   
Sbjct: 11  LGLIVGLLMGLTGAGGGILSVPLLVFV---LHLPIADAAPISLSAIALSAGVGALLSLRN 67

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                          A   +    + ++PL   ++  I    L I FS  +F  S  
Sbjct: 68  EILRYK---------AAGFMAIFGLTLSPLGLWVAQRIPNAPLLILFSCTLFFVSTR 115


>gi|148547131|ref|YP_001267233.1| hypothetical protein Pput_1901 [Pseudomonas putida F1]
 gi|148511189|gb|ABQ78049.1| protein of unknown function DUF81 [Pseudomonas putida F1]
          Length = 276

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 95/266 (35%), Gaps = 25/266 (9%)

Query: 12  VFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
           VF + + V+  I ++ V +F +G +    G GGGL+ +P L           S      +
Sbjct: 16  VFTAWNRVMMDIAVLSVFAFAAGLIDAAVG-GGGLIQIPALFNVL------PSAQPAALL 68

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
           G++       +  +     R  T++  ++        + +   +  +S V  S +  A  
Sbjct: 69  GSNKLASVCGTAFAARSFIRKVTLDWGLIVPAALSAFVMSFAGAATVSLVPPSVMRPAVL 128

Query: 132 IFCLLMGILMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
           +  +LM +    +               +  +  + G   GF  G  G G G     L +
Sbjct: 129 VLIVLMAVYTFCKKDFGTLHTPAQVGRKEQCLAVLIGGAIGFYDGLFGPGTGSFLIFLFI 188

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
            F+      A+A++  V+      AL+  + +            G V     L +   +I
Sbjct: 189 RFFALDFLHASASAKVVNIATNLAALVFFVPT------------GNVLYAIALPMAACNI 236

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIM 271
           L     T L+   G  ++   F +++
Sbjct: 237 LGALTGTWLAVRKGAGFVRGLFLVLL 262


>gi|254563156|ref|YP_003070251.1| hypothetical protein METDI4819 [Methylobacterium extorquens DM4]
 gi|254270434|emb|CAX26434.1| conserved membrane protein of unknown function, DUF81
           [Methylobacterium extorquens DM4]
          Length = 260

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 92/267 (34%), Gaps = 29/267 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L +++    G   GL G GG ++  P+L      +G+      HVA+GT    +A ++
Sbjct: 3   VVLALLSGGFVGFSLGLIGGGGSILATPLLIYV---VGVGQP---HVAIGTGALAVAVSA 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +F  H R G +       +     +  +  S +    D   L   FA+  + +G+LML
Sbjct: 57  MANFSGHWRAGNVRWGNALVFAAFGVVGALGGSTLGKAFDGERLLFLFALLMIAVGLLML 116

Query: 143 KRDRLYCERKFPDN--------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIY 193
           +        +                   +  G  SG  G+GGG      ++F  G  + 
Sbjct: 117 RSGERNGSGRVAAGAPSAPAFTPRLAAVALAVGAASGFFGIGGGFLIVPGLVFATGMPMI 176

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A  TS                 SG             ++       +   ++      +
Sbjct: 177 NAIGTSLFAVGAFGLATAANYALSGL------------IDWPVAAQYIAGGLIGGWAGMR 224

Query: 254 LSYMIGKKY--LTIGFSMIMFTTSFVF 278
           L+  +  +   L   F+ ++FT +   
Sbjct: 225 LACRLAGRKGALDRIFASLIFTVAAYM 251



 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 36/100 (36%), Gaps = 9/100 (9%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++VP L  A         + M  A+GTSL  +    + +   +   G I+  +   +I  
Sbjct: 162 LIVPGLVFA-------TGMPMINAIGTSLFAVGAFGLATAANYALSGLIDWPVAAQYIAG 214

Query: 107 LPITTVVTSLMISHVDKS--FLNKAFAIFCLLMGILMLKR 144
             I       +   +      L++ FA     +   ML R
Sbjct: 215 GLIGGWAGMRLACRLAGRKGALDRIFASLIFTVAAYMLYR 254


>gi|298488400|ref|ZP_07006431.1| membrane protein, putative [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298157025|gb|EFH98114.1| membrane protein, putative [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 261

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 98/271 (36%), Gaps = 39/271 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +VA  + G + G+ GVGGG +M P+L       GI+ +     A+GT L   A T    
Sbjct: 8   FVVAGLVVGFIVGMTGVGGGSLMTPILLW----FGINPA----TAVGTDLLYAAITKSGG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
            + HR++  I+ K+            ++T   +S +        + + +A     LL  +
Sbjct: 60  VLVHRKNDNIDWKVTGLLTLGSVPAVLLTLWFLSTLHTAPEALNAIIKQALGFVLLLTAL 119

Query: 140 LMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLML 186
            +L + +L                     +  I G++ G +     +G G      L +L
Sbjct: 120 AVLLKKKLLAFAHGRGDGHSFFSGTSLTVLTVITGLILGTMVALTSIGAGALGTVALFIL 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           +      +   T    +  +              + GL   S+G +N   +  +L  S+ 
Sbjct: 180 YPLLPTRRLVGTEIAHAVPLTL------------VAGLGHASMGNMNWELLGWLLMGSLP 227

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              L + ++  +    L    ++++    F 
Sbjct: 228 GIYLGSHMAGRVSDDLLRPFLAIMLGMIGFK 258



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 46/120 (38%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 148 VLTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAVPLTL 201

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G +N ++L   +        + S M   V    L    AI   ++G  ++ 
Sbjct: 202 VAGLGHASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDDLLRPFLAIMLGMIGFKLVF 261



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                 + G+V GF+ G  GVGGG     ++L++G +   A  T    +A+     +L
Sbjct: 4   GGLGFVVAGLVVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVL 61


>gi|188583850|ref|YP_001927295.1| hypothetical protein Mpop_4664 [Methylobacterium populi BJ001]
 gi|179347348|gb|ACB82760.1| protein of unknown function DUF81 [Methylobacterium populi BJ001]
          Length = 253

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 59/155 (38%), Gaps = 4/155 (2%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +HVA+GT    +A  ++++ + H R   +  +    +     +  ++ + +    D   L
Sbjct: 45  VHVAVGTGAFAVAACALVNLVGHLRVARVPWRAAGWFGLAGILAALLGADLGKQFDGPRL 104

Query: 127 NKAFAIFCLLMGILMLKRD-RLYCERKFP--DNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
              FA+  L    +ML+R  R   E   P         +G  TG +SG  G+GGG     
Sbjct: 105 QALFALVMLAAAGMMLRRRFRPAAEPDAPRESVPKLVGFGGATGLMSGFFGIGGGFLVVP 164

Query: 184 -LMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
            L+   G  +  A   S  V         +    S
Sbjct: 165 GLVAATGMPLVSAVGCSLVVITAFGLTTGISYALS 199


>gi|149369970|ref|ZP_01889821.1| hypothetical protein SCB49_02814 [unidentified eubacterium SCB49]
 gi|149356461|gb|EDM45017.1| hypothetical protein SCB49_02814 [unidentified eubacterium SCB49]
          Length = 266

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 7/100 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            +++P L    +L        M  A+ TSL +IA  S++ F+   ++  I+   L  +  
Sbjct: 171 FLIIPALVLLAKL-------PMKKAVATSLFIIAIKSLIGFLGDVQNLDIDWVFLLSFTA 223

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           +  +   +   +   +D   L K F  F L+MG+ ++ ++
Sbjct: 224 ISIVGIFIGIWLNKFIDGKKLKKVFGWFVLVMGVYIIYKE 263



 Score = 39.3 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 90/249 (36%), Gaps = 37/249 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP+L  A  L  +       +A   SL V+  TS++  +++   G ++ K    +   
Sbjct: 29  LTVPILVYALTLNPV-------IATAYSLFVVGATSLVGAIKNIIKGMVDFKTAIIFSIP 81

Query: 107 LPITTVVT-SLMISHVDKSFLNK-------------AFAIFCLLMGILML--KRDRLYCE 150
             +    T + +I  + ++  +               FA+  LL  + M+  +R     E
Sbjct: 82  AFVAVYFTRAYLIPAIPETLFSIGDFIVTKNLAIMLFFALIMLLASVSMIWSRRKETDDE 141

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIF--TNLLMLFYGASIYKATATSAGVSALIAF 208
           +K   NY   I       +   +   GG F     L+L     + KA ATS     +IA 
Sbjct: 142 KKVSYNYPLIIIEGAVVGVVTGIVGAGGGFLIIPALVLLAKLPMKKAVATSL---FIIAI 198

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            +L+  +     L+         ++   +L    ISI+   +   L+  I  K L   F 
Sbjct: 199 KSLIGFLGDVQNLD---------IDWVFLLSFTAISIVGIFIGIWLNKFIDGKKLKKVFG 249

Query: 269 MIMFTTSFV 277
             +      
Sbjct: 250 WFVLVMGVY 258


>gi|331702096|ref|YP_004399055.1| hypothetical protein Lbuc_1744 [Lactobacillus buchneri NRRL
           B-30929]
 gi|329129439|gb|AEB73992.1| protein of unknown function DUF81 [Lactobacillus buchneri NRRL
           B-30929]
          Length = 278

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 49/291 (16%), Positives = 109/291 (37%), Gaps = 50/291 (17%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +++Y  L+I     +G    + G+GGG+++ P+L+           + +  A+G S+  +
Sbjct: 1   MINYALLMIAIGVFAGFAGAILGLGGGIILTPILTLLM-------GVDIKYAIGASIIAV 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS  + + + R   +N+++         +  +  +L+   +D  +L   F +  L  G
Sbjct: 54  IATSSGATIAYLRDKVLNLRVAMFLEIATTLGALSGALLTGVIDPKYLYILFGLLLLFSG 113

Query: 139 ILMLKR-------------DRLYCERKFPDNYVKYIWGMVT-----------------GF 168
             M+++             D+L  + K   +Y   + G                    G 
Sbjct: 114 YNMIRKLISHQEVLHRAHPDQLSSKFKLDSSYFDNVEGKTINYQVEHIPGGLAVMYGAGI 173

Query: 169 LSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            SG LG+G G F  + M       +  +T+TS  +  + A  +  V  ++G         
Sbjct: 174 ASGLLGIGSGAFKVMAMDTVMKMPLKPSTSTSNLMMGVTAAASATVYFFNGSIKPM---- 229

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               + +   L I    ++     +++   +  + + + F  I+F      
Sbjct: 230 ----IAVPLALGI----LVGARGGSRIMRDMSARTIRMIFVPILFYIGIEM 272



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 56/139 (40%), Gaps = 11/139 (7%)

Query: 8   FSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
           F  +   + +  V++I   +   + +G  SGL G+G G         AF++M +D  + M
Sbjct: 146 FDNVEGKTINYQVEHIPGGLAVMYGAGIASGLLGIGSG---------AFKVMAMDTVMKM 196

Query: 68  HV--AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
            +  +  TS  ++  T+  S   +  +G+I   I       + +     S ++  +    
Sbjct: 197 PLKPSTSTSNLMMGVTAAASATVYFFNGSIKPMIAVPLALGILVGARGGSRIMRDMSART 256

Query: 126 LNKAFAIFCLLMGILMLKR 144
           +   F      +GI M  +
Sbjct: 257 IRMIFVPILFYIGIEMFMK 275


>gi|260905196|ref|ZP_05913518.1| hypothetical protein BlinB_07680 [Brevibacterium linens BL2]
          Length = 268

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 16/212 (7%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
             D  +  +  ++ A  L+G +  + G GGGL+ +P L            +    A+ T+
Sbjct: 7   GIDVTLGMLLWLLAAGVLAGWIDAVVG-GGGLIQLPALLLV-------PGMTPVQAVATN 58

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
                  +  S + + R  T +            +  V  + + + V             
Sbjct: 59  KVGSIAGTTASAVTYLRKITPDRSATIPAAATAFLGAVFGAKLATLVPGELFTPIILAAL 118

Query: 135 LLMGILMLKRDRLYCERKF-------PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLML 186
           + +G+  +    L  +            + + ++ G+V G   G LG G G       + 
Sbjct: 119 IGVGLFTVLNPSLGADASLRFGESSKRHHGLSWLIGLVVGIYDGVLGPGTGSFLVIAFVT 178

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             G S  +A+AT+  ++    F AL+  I  G
Sbjct: 179 VIGFSFLQASATAKVINWATNFGALVFFIPDG 210


>gi|226951426|ref|ZP_03821890.1| transmembrane protein [Acinetobacter sp. ATCC 27244]
 gi|226837848|gb|EEH70231.1| transmembrane protein [Acinetobacter sp. ATCC 27244]
          Length = 254

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 13/202 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++ + +F  G +    G GGGLV +P L  A           +   +GT+   +   +
Sbjct: 7   LIILGLFAFCGGLIDAAVG-GGGLVQIPALLHAL------PQHSIATVLGTNKLAVWAGT 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             SF  +        K+L   +    +   + ++ I+H+ K F+  +     ++M +   
Sbjct: 60  ASSFFRYVHKVKFVWKLLIPTMLSAFVFAFIGAMSIAHIPKQFMTYSVLFLLIIMAVYTF 119

Query: 143 KRDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKAT 196
            +  L            + ++  ++G V GF  G  G G G F   L +  +G     A+
Sbjct: 120 LKKDLGAYSTDIKCGHKEIFLGIVFGGVIGFYDGIFGPGSGSFLLFLFVKVFGFDFLSAS 179

Query: 197 ATSAGVSALIAFPALLVRIYSG 218
           A++  V+      ALL  I +G
Sbjct: 180 ASAKVVNLGTFSAALLFFIPTG 201


>gi|284046974|ref|YP_003397314.1| hypothetical protein Cwoe_5534 [Conexibacter woesei DSM 14684]
 gi|283951195|gb|ADB53939.1| protein of unknown function DUF81 [Conexibacter woesei DSM 14684]
          Length = 309

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 52/273 (19%), Positives = 93/273 (34%), Gaps = 43/273 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+I      G L G+ G+GGG +M P+L                 A+GT L   A T  +
Sbjct: 5   LVIAFGLGVGLLVGMTGIGGGSLMTPLLILVL-------GTAPTTAIGTDLAYAAVTKTV 57

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK--------SFLNKAFAIFCLL 136
               H R G+++M I            +    ++  ++K        +FL    A    +
Sbjct: 58  GGWRHWRRGSVDMTIALWLAVGSIPGALGGVQVLHVLEKALGGDSFDTFLLTLVAGALFV 117

Query: 137 MGILMLKR-------------DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
            GI +L R             +      K     V    G V G  S      G +    
Sbjct: 118 TGIAVLARALFMSSGGERVTIEDFDTRHKVAAVIVGVGVGFVLGLTSA---GSGALIAVA 174

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           L++ +  +  +   T    +AL+ + A +   +S            G V++     IL  
Sbjct: 175 LIMIFRLTPIRVVGTDVFHAALLLWVASIAHFFS------------GNVDLALAGNILIG 222

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           SI    + + L++ + +  L     +++     
Sbjct: 223 SIPGVWIGSNLAFKMPENALRPTLGIVLLAAGM 255



 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 40/120 (33%), Gaps = 11/120 (9%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
           D  +   +G+  G L G  G+GGG     L++              G +   A    L  
Sbjct: 2   DWPLVIAFGLGVGLLVGMTGIGGGSLMTPLLILV-----------LGTAPTTAIGTDLAY 50

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                 + G   W  G V++   L +   SI       ++ +++ K      F   + T 
Sbjct: 51  AAVTKTVGGWRHWRRGSVDMTIALWLAVGSIPGALGGVQVLHVLEKALGGDSFDTFLLTL 110


>gi|188583714|ref|YP_001927159.1| hypothetical protein Mpop_4526 [Methylobacterium populi BJ001]
 gi|179347212|gb|ACB82624.1| protein of unknown function DUF81 [Methylobacterium populi BJ001]
          Length = 305

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 4/142 (2%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             T+  S + H R G ++ ++ +  +    I  V  + +++ VD   +    +++ L MG
Sbjct: 111 IFTTAFSGLSHWRLGNVDGRLFRRLLIPGAIGAVAGATLLTSVDGEAIKPFVSVYLLGMG 170

Query: 139 ILMLKR--DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           + +L +    L   R+ P   V    G   GF+    G G G      ++  G       
Sbjct: 171 LYVLSKAFRTLKTRREPPRAVVPLALGG--GFVDAVGGGGWGPVVTTTLVGGGQDPRTTI 228

Query: 197 ATSAGVSALIAFPALLVRIYSG 218
            T       IA  + L     G
Sbjct: 229 GTVNAAEFFIALASGLSFTLLG 250


>gi|159038920|ref|YP_001538173.1| hypothetical protein Sare_3380 [Salinispora arenicola CNS-205]
 gi|157917755|gb|ABV99182.1| protein of unknown function DUF81 [Salinispora arenicola CNS-205]
          Length = 320

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 85/260 (32%), Gaps = 22/260 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++ +    +  + G  G+G GL            + +   +    A  +       T+
Sbjct: 4   LLVLALVGMAAQLVDGALGMGYGL--------TSSTLLLLAGVSPAAASASVHLAEVGTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + + H R G ++ +++        +     +  +S V  +      A     +G  +L
Sbjct: 56  LAAGVAHWRFGNVDWRVVGRIAVPGALGAFAGATFLSAVSTAAAAPWMAAILFTLGAYLL 115

Query: 143 KRDRLYCERKF----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATA 197
            R                      G+V GF+    G G G      +L  G     K   
Sbjct: 116 VRFSRPLRTGQRVGRLRGRFLGPLGLVAGFVDATGGGGWGPVATPALLVSGRLEPRKVIG 175

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           +      ++A  A +  +            S GF+ +  V+ +L   ++  P+A  L  +
Sbjct: 176 SVDTAEFVVAGAASVGFLIG--------LGSEGFL-LPMVVALLAGGLIAAPVAAWLVRL 226

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           +  + L      ++  T+  
Sbjct: 227 VPAQLLGAVVGGVIVLTNAR 246


>gi|294650946|ref|ZP_06728289.1| hypothetical protein HMP0015_2498 [Acinetobacter haemolyticus ATCC
           19194]
 gi|292823163|gb|EFF82023.1| hypothetical protein HMP0015_2498 [Acinetobacter haemolyticus ATCC
           19194]
          Length = 254

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 13/202 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++ + +F  G +    G GGGLV +P L  A           +   +GT+   +   +
Sbjct: 7   LIILGLFAFCGGLIDAAVG-GGGLVQIPALLHAL------PQHSIATVLGTNKLAVWAGT 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             SF  +        K+L   +    +   + ++ I+H+ K F+  +     ++M +   
Sbjct: 60  ASSFFRYVNKVKFVWKLLIPTMLSAFVFAFIGAMSIAHIPKQFMTYSVLFLLIIMAVYTF 119

Query: 143 KRDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKAT 196
            +  L            + ++  ++G V GF  G  G G G F   L +  +G     A+
Sbjct: 120 LKKDLGAYSTNIKCGHKEIFLGIVFGGVIGFYDGIFGPGSGSFLLFLFVKVFGFDFLSAS 179

Query: 197 ATSAGVSALIAFPALLVRIYSG 218
           A++  V+      ALL  I +G
Sbjct: 180 ASAKVVNLGTFSAALLFFIPTG 201


>gi|332283406|ref|YP_004415317.1| hypothetical protein PT7_0153 [Pusillimonas sp. T7-7]
 gi|330427359|gb|AEC18693.1| hypothetical protein PT7_0153 [Pusillimonas sp. T7-7]
          Length = 245

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 95/255 (37%), Gaps = 24/255 (9%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A  L+G L G  G+G G+++VPVL+      G+      H    +SL    P   ++ 
Sbjct: 6   LLAVVLAGFLIGATGIG-GVLLVPVLT------GMGGIDAAHAIAASSLAFGFP--GIAA 56

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           + +       M+     +        + ++++  +D  F+     +     G+  L  +R
Sbjct: 57  LWYLNQDRERMREAMPVVIGTVPGAALGAVLVHSLDSRFVLVLVTVTIFFAGLRGLFGNR 116

Query: 147 LYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
              E   +           G++ G  S   G GG +    L++     +  A  T   V 
Sbjct: 117 AVIEETIKPPITRGGLAGIGLLAGVGSALTGTGGPVLLIPLLMLLHQPLRLAIVTGQTVQ 176

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
             IA  A+ V   +G        W LG    GA+ +IL ++ L    A +    +  K L
Sbjct: 177 LPIALAAIAVHARAGSL-----DWMLG----GALGVILLLASLAGQWAAR---RMQVKLL 224

Query: 264 TIGFSMIMFTTSFVF 278
               S+ +      F
Sbjct: 225 QTALSVFLLLIGIWF 239



 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 8/116 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +     L+G  S L G GG     PVL     ++       + +A+ T   V  P ++ +
Sbjct: 132 LAGIGLLAGVGSALTGTGG-----PVLLIPLLMLLHQP---LRLAIVTGQTVQLPIALAA 183

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              H R G+++  +      +L + ++        +    L  A ++F LL+GI  
Sbjct: 184 IAVHARAGSLDWMLGGALGVILLLASLAGQWAARRMQVKLLQTALSVFLLLIGIWF 239


>gi|256824986|ref|YP_003148946.1| permease [Kytococcus sedentarius DSM 20547]
 gi|256688379|gb|ACV06181.1| predicted permease [Kytococcus sedentarius DSM 20547]
          Length = 262

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 91/245 (37%), Gaps = 25/245 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  +  + L+  A  L+G +  + G GGGLV +P L     ++G   +  + V     + 
Sbjct: 5   EVTLTLLALMFAAGLLAGWIDAVVG-GGGLVQLPAL-----MLGFPQAAPVQVLATNKIA 58

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            IA TSV +   + R    +++       +    +   + + + + +           +L
Sbjct: 59  AIAGTSVSAV-TYYRRVRPDLRTAIPLAVLAFAGSFFGARVAAAIPQEAFTPIIMGALVL 117

Query: 137 MGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGA 190
           +G   L +  L  E +          V  + G   GF  GALG G G F    ++   G 
Sbjct: 118 VGAYTLLKKDLGREARMRFDGREHLAVAGLAGAAIGFYDGALGPGTGSFLVFALVGLLGY 177

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
               A+A +   +      AL+V +       G   W +G V       +   +++   L
Sbjct: 178 DFLAASAKAKIANVATNLAALVVFV-----PMGAVVWEVGAV-------MALGNVIGGYL 225

Query: 251 ATKLS 255
             + +
Sbjct: 226 GARTA 230


>gi|307592360|ref|YP_003899951.1| hypothetical protein Cyan7822_6038 [Cyanothece sp. PCC 7822]
 gi|306986005|gb|ADN17885.1| protein of unknown function DUF81 [Cyanothece sp. PCC 7822]
          Length = 187

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 9/127 (7%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +   G   GL G GG ++ VP L      MG+        A+  +L  +   S++  +
Sbjct: 9   IIAVFIGISLGLIGSGGSVLAVPTLVYI---MGVPP----KEAIAVTLVAVGSVSLLGVI 61

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMIS--HVDKSFLNKAFAIFCLLMGILMLKRD 145
            H + G + +K    +     I     + + +   +  +     F    LL  +LM+++ 
Sbjct: 62  PHWKLGNVRLKTAAVFGLSTMIGAYSGARLATLPFMSGTLQMLIFGTTMLLAALLMIRKT 121

Query: 146 RLYCERK 152
                 +
Sbjct: 122 SKAQTSQ 128


>gi|90419677|ref|ZP_01227587.1| possible permease [Aurantimonas manganoxydans SI85-9A1]
 gi|90336614|gb|EAS50355.1| possible permease [Aurantimonas manganoxydans SI85-9A1]
          Length = 226

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 78/218 (35%), Gaps = 19/218 (8%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           H+A+GTS   +A  +  + + H R G +  +    +     +  +  S +   +D   L 
Sbjct: 11  HMAIGTSAFAVAANAAGNLVTHARLGHVKWRCAFVYSAAGIVGALAGSTLGKLIDGEQLL 70

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFP----DNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
            AFA+  + +GI+M +      +        +      +G  TG  SG  G+GGG     
Sbjct: 71  FAFALLMIGVGIMMFRHRGHGGDHDIECNRQNAPKVVGYGAGTGAFSGFFGIGGGFLIVP 130

Query: 184 LML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            ++   G ++  A  TS            L    S            G+V+    L+ + 
Sbjct: 131 SLVAATGMTMLNAIGTSLVAITAFGLTTALNYALS------------GYVDWPLALVFIA 178

Query: 243 ISILITPLATKLSYMIGKKY--LTIGFSMIMFTTSFVF 278
             +        ++  +  +   L I F+ ++   +   
Sbjct: 179 GGLAGGVAGAYIARWLSGRKGALDIAFAGLIMLVAIYM 216



 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 9/101 (8%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           ++VP L  A         + M  A+GTSL  I    + + + +   G ++  +   +I  
Sbjct: 127 LIVPSLVAA-------TGMTMLNAIGTSLVAITAFGLTTALNYALSGYVDWPLALVFIAG 179

Query: 107 LPITTVVTSLMISHVDKS--FLNKAFAIFCLLMGILMLKRD 145
                V  + +   +      L+ AFA   +L+ I ML + 
Sbjct: 180 GLAGGVAGAYIARWLSGRKGALDIAFAGLIMLVAIYMLVKS 220


>gi|257438156|ref|ZP_05613911.1| putative membrane protein [Faecalibacterium prausnitzii A2-165]
 gi|257199487|gb|EEU97771.1| putative membrane protein [Faecalibacterium prausnitzii A2-165]
          Length = 249

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 75/205 (36%), Gaps = 16/205 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +  +++ +  +G +    G GGGL+ +P    A         + +H   GT+    A  
Sbjct: 1   MLLFLMLMTGFAGFVDSAAG-GGGLISLPAYLFA--------GLPVHYTYGTNKFSAACG 51

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  +  +  + G +N+++         + + + S ++  +    L     I   +  +L+
Sbjct: 52  TTFATAQFFQKGAMNIRVGLLAAVGSFVGSALGSHIVLLLSDQVLRTMMLIILPVAAVLI 111

Query: 142 LKRDRLYCERK------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYK 194
           L R  L  E +           +    G+  G   G  G G G F  +      G  +  
Sbjct: 112 LWRRDLPDENRDDGTLNAKKAVLALAIGLGIGLYDGIFGPGTGTFAIIAFTTLMGFDLRT 171

Query: 195 ATATSAGVSALIAFPALLVRIYSGW 219
           A   +  ++    + +L+  + SG 
Sbjct: 172 AGGNAKVLNLASNYASLVTYLSSGL 196


>gi|108803810|ref|YP_643747.1| hypothetical protein Rxyl_0968 [Rubrobacter xylanophilus DSM 9941]
 gi|108765053|gb|ABG03935.1| protein of unknown function DUF81 [Rubrobacter xylanophilus DSM
           9941]
          Length = 269

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              ++     G L GL  +G G VM  +L   + L          V +GT +      S+
Sbjct: 156 AYTVLFGAFGGYLVGLTSIGSGSVMAIILLLLYPL-------SPAVIVGTDITHATVLSL 208

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H  HG ++  ++   +       +V S+    +    L    A+  + +G  ML 
Sbjct: 209 VTGLSHMAHGNVDFSLVGALLVGGIPGVIVGSVAARWLPGRPLRLILALTLIFVGARMLL 268

Query: 144 R 144
            
Sbjct: 269 G 269



 Score = 38.9 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 81/249 (32%), Gaps = 40/249 (16%)

Query: 54  KAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV 113
                +G+        A+GT +     T +   ++H R  ++N+++           +++
Sbjct: 34  FLMTAVGVPAPT----AIGTDMIYATVTKLTGSLQHYRQRSVNLEVALFLGMGSIPASLL 89

Query: 114 TSLMISHVDKSF--------LNKAFAIFCLLMGILMLKRDRLYCERKF------------ 153
               +  ++ SF        +    A   +L+G  ++ R  +    +             
Sbjct: 90  GVQTLEWIEGSFDPGRVREIMVTVIAATLVLVGSSLVFRVFMPENWRLRKDGKVWDGKGP 149

Query: 154 ---PDNYVKYIWGMVTGFLSGALGVGGGI-FTNLLMLFYGASIYKATATSAGVSALIAFP 209
                     ++G   G+L G   +G G     +L+L Y  S      T    + +++  
Sbjct: 150 MSRRRRAYTVLFGAFGGYLVGLTSIGSGSVMAIILLLLYPLSPAVIVGTDITHATVLSL- 208

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
                      + GL   + G V+   V  +L   I    + +  +  +  + L +  ++
Sbjct: 209 -----------VTGLSHMAHGNVDFSLVGALLVGGIPGVIVGSVAARWLPGRPLRLILAL 257

Query: 270 IMFTTSFVF 278
            +       
Sbjct: 258 TLIFVGARM 266


>gi|326789995|ref|YP_004307816.1| hypothetical protein Clole_0885 [Clostridium lentocellum DSM 5427]
 gi|326540759|gb|ADZ82618.1| protein of unknown function DUF81 [Clostridium lentocellum DSM
           5427]
          Length = 255

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 96/257 (37%), Gaps = 28/257 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           + ++  + ++    F++G +  + G GGGL+ +P          +   + +H+A G++  
Sbjct: 2   EEIIKNLFIVCPLVFIAGFVDAVAG-GGGLISLPA--------YMMTGMPIHMAAGSNKF 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  ++++  ++ + G I  KI         I + + + +  ++ +  L     +   L
Sbjct: 53  SASCGTIIAAGKYIKSGKIKWKIAIYSAIGAIIGSTIGTKLALYISEKHLKVLMLVALPL 112

Query: 137 MGILMLKRDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYG 189
           + + ++ +  L  + +           +  + G++ G   G +G G G F  L       
Sbjct: 113 VALFIMTQKNLGEQLEERSLGAIKLISLSGMIGVIIGCYDGLIGPGTGTFMILGFSGLLR 172

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +  ++  +   +      ++++    G  +  L         I A       SI+   
Sbjct: 173 LDLVTSSGCAKVSNLASNLTSVVLYFIEGKVIFILA--------IPA----AVCSIVGAY 220

Query: 250 LATKLSYMIGKKYLTIG 266
           +  K +   G K +   
Sbjct: 221 MGAKFAIKGGAKKVRYV 237


>gi|325524483|gb|EGD02538.1| hypothetical protein B1M_21018 [Burkholderia sp. TJI49]
          Length = 179

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 8/120 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +     L+G ++GL GVGGG ++VP+L K         +I MH  + TSL VIA   +  
Sbjct: 62  LAATGALTGLMTGLLGVGGGFIIVPMLRKL-------TNITMHGIVATSLMVIALVGIGG 114

Query: 86  FMEHRRHGTI-NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                  G    ++    +     +  V   ++   +    +   FA   +L+ + M  +
Sbjct: 115 IASTMLQGAAPPLEFTALFTVTTALGMVTGRMVARKLSVRHIQMGFAGILVLIAVGMAVK 174



 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 60/183 (32%), Gaps = 32/183 (17%)

Query: 118 ISHVDKSFLNKAFAIFCLLMGILMLK--------------------RDRLYCERKFPDNY 157
              + +  L   FA+  L++ I +L+                     D            
Sbjct: 1   AHRLPQRLLMLMFALVMLVVAIRLLRQAARGAIASTESRWCVARIDPDSGRIAWNRLSAL 60

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIY 216
                G +TG ++G LGVGGG     ++      +++   ATS  V AL+    +   + 
Sbjct: 61  SLAATGALTGLMTGLLGVGGGFIIVPMLRKLTNITMHGIVATSLMVIALVGIGGIASTML 120

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            G               +    +    + L       ++  +  +++ +GF+ I+   + 
Sbjct: 121 QGAAPP-----------LEFTALFTVTTALGMVTGRMVARKLSVRHIQMGFAGILVLIAV 169

Query: 277 VFA 279
             A
Sbjct: 170 GMA 172


>gi|294012590|ref|YP_003546050.1| putative permease [Sphingobium japonicum UT26S]
 gi|292675920|dbj|BAI97438.1| putative permease [Sphingobium japonicum UT26S]
          Length = 266

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 85/240 (35%), Gaps = 25/240 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP++      +G+      HVA+GTS   +A  +    + H R   +  +    +  
Sbjct: 29  ILAVPLMVYL---VGVPSP---HVAIGTSALAVAANAAAGLVNHARAHHVKWRCGSMYAL 82

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD----RLYCERKFPDNYVKYI 161
                    S +   V+   L   FA+  LL+G LML+          E           
Sbjct: 83  AGVAGAFAGSSLGKTVNGEKLLFLFALVMLLVGALMLRGRGNPGDPGAECNREKAPQVIA 142

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWG 220
           +G+ +G  SG  G+GGG      ++   G  +  A  TS                +SG  
Sbjct: 143 YGLGSGLFSGFFGIGGGFLIVPGLVASTGMPMLMAVGTSLIAVTAFGLTTAANYAFSGL- 201

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK--YLTIGFSMIMFTTSFVF 278
                      V+    L  +   +  +   T+ +  +G++   LT  F+ ++F  +   
Sbjct: 202 -----------VDWLLALTFVLGGVAGSVAGTRAAEKLGERTGRLTSIFAGLIFVVALYM 250



 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 2/86 (2%)

Query: 62  DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV 121
              + M +A+GTSL  +    + +   +   G ++  +   ++      +V  +     +
Sbjct: 169 STGMPMLMAVGTSLIAVTAFGLTTAANYAFSGLVDWLLALTFVLGGVAGSVAGTRAAEKL 228

Query: 122 DKSF--LNKAFAIFCLLMGILMLKRD 145
            +    L   FA    ++ + ML R 
Sbjct: 229 GERTGRLTSIFAGLIFVVALYMLWRS 254


>gi|110637730|ref|YP_677937.1| hypothetical protein CHU_1325 [Cytophaga hutchinsonii ATCC 33406]
 gi|110280411|gb|ABG58597.1| conserved hypothetical protein (possible transporter) [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 246

 Score = 52.4 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 63/149 (42%), Gaps = 5/149 (3%)

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
            TSL +    + ++  +  + G  + K+   +         +   +   +D  +      
Sbjct: 46  STSLILNIVVASIASYKFIKAGYFDAKVFIYFSITSIPAAFIGGAIT--LDPFWFKWFAG 103

Query: 132 IFCLLMGILMLKRDRLYCERKFP--DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
           +F L+  + ++ R++   + +    + Y   I G V G  SG +GVGGGIF + L++  G
Sbjct: 104 VFLLVSAVALIIRNKQIEQNEIKEVNLYTALIVGAVIGLFSGLIGVGGGIFLSPLIIVMG 163

Query: 190 A-SIYKATATSAGVSALIAFPALLVRIYS 217
             S+ K +  +A      +   L   ++S
Sbjct: 164 WTSLKKTSGVAALFILCNSLIGLAGHMFS 192


>gi|313902074|ref|ZP_07835487.1| protein of unknown function DUF81 [Thermaerobacter subterraneus DSM
           13965]
 gi|313467683|gb|EFR63184.1| protein of unknown function DUF81 [Thermaerobacter subterraneus DSM
           13965]
          Length = 161

 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 7/93 (7%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       G+ D    H A GTS+ V+  TS++S   +   G +++++         +
Sbjct: 73  PALVY---WFGVPD----HRAHGTSILVVGLTSIISAAVYAARGLVDVQLAWQVAAGGMV 125

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              V +  +  +    L + +  F LL+G+ M+
Sbjct: 126 GAAVGARWMERLQPRGLRRLYGWFLLLLGLRMM 158


>gi|258650623|ref|YP_003199779.1| hypothetical protein Namu_0360 [Nakamurella multipartita DSM 44233]
 gi|258553848|gb|ACV76790.1| protein of unknown function DUF81 [Nakamurella multipartita DSM
           44233]
          Length = 275

 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 91/256 (35%), Gaps = 43/256 (16%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L      +G+D       A   SL ++  T+V+  + H R G + M     +  V  
Sbjct: 29  VPALVYL---VGMDP----RAATTGSLIIVGVTAVVGMLAHHRDGHVRMSKGVVFGLVGA 81

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT-- 166
           +  V  S +   V    L   F++  L +  +ML R R+   R  P       + +    
Sbjct: 82  VGAVAGSRLSLAVPPDVLLAGFSVLMLAVAAIMLARRRVPAGRGGPGMAEAVPFDVPIVS 141

Query: 167 ----------------------GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVS 203
                                 G ++G  GVGGG      ++      +  A  TS  V 
Sbjct: 142 FTPRFVCACPRAAKVVVAALALGLMTGFFGVGGGFLVVPALVLALDFPMPVAVGTSLLVI 201

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           AL +  +L+ R  SG             ++   + +    +++ + L  +++  +  + L
Sbjct: 202 ALNSATSLVARAGSGLE-----------IDWSVIAVFTGAAVIGSLLGARIARRVRPQSL 250

Query: 264 TIGFSMIMFTTSFVFA 279
            I F+ ++       A
Sbjct: 251 QIAFAGLIVAVGLYTA 266



 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVD 122
              M VA+GTSL VIA  S  S +     G  I+  ++  +     I +++ + +   V 
Sbjct: 187 DFPMPVAVGTSLLVIALNSATSLVARAGSGLEIDWSVIAVFTGAAVIGSLLGARIARRVR 246

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRL 147
              L  AFA   + +G+    R   
Sbjct: 247 PQSLQIAFAGLIVAVGLYTAARSLP 271


>gi|134299127|ref|YP_001112623.1| hypothetical protein Dred_1264 [Desulfotomaculum reducens MI-1]
 gi|134051827|gb|ABO49798.1| protein of unknown function DUF81 [Desulfotomaculum reducens MI-1]
          Length = 317

 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 8/125 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
             A  +   +S   GVGGG ++VP ++             M++  GTS+  I  +S+ S 
Sbjct: 195 FFAGIIVAIISASLGVGGGFLLVPFMTSVMGF-------PMYIVAGTSVLSILVSSMTSI 247

Query: 87  MEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
             +   G+ I+   L   +  + I TVV + +  +V+   +    A   L  G+  +   
Sbjct: 248 ANYLTLGSKIDFSFLGFELIGVAIGTVVAAHLSKYVNARKMKYFLAFILLYCGVKYMFGP 307

Query: 146 RLYCE 150
            +   
Sbjct: 308 IIKAA 312



 Score = 42.4 bits (99), Expect = 0.075,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 46/125 (36%), Gaps = 12/125 (9%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLV 213
           +    +  G++   +S +LGVGGG      M    G  +Y    TS     + +  ++  
Sbjct: 190 NALTPFFAGIIVAIISASLGVGGGFLLVPFMTSVMGFPMYIVAGTSVLSILVSSMTSIAN 249

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            +  G  ++      LGF     ++ +   +++       LS  +  + +    + I+  
Sbjct: 250 YLTLGSKIDFS---FLGF----ELIGVAIGTVVAA----HLSKYVNARKMKYFLAFILLY 298

Query: 274 TSFVF 278
               +
Sbjct: 299 CGVKY 303


>gi|320161511|ref|YP_004174735.1| hypothetical protein ANT_21090 [Anaerolinea thermophila UNI-1]
 gi|319995364|dbj|BAJ64135.1| hypothetical membrane protein [Anaerolinea thermophila UNI-1]
          Length = 272

 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 46/134 (34%), Gaps = 12/134 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            + I+   + G +S   GV GG +++P L   +        I + +A   SL +  PT  
Sbjct: 142 IVGIICGAMIGIVSSTLGVAGGELIIPTLIFIY-------GIDVKLAGTASLMISLPTVA 194

Query: 84  MSFMEHRRHGTINMK-----ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                + R G    +     ++           ++  +++  +   +L     +  ++  
Sbjct: 195 TGIFRYFRKGLYRERKEWTTMIAPMGAGSVAGAILGGILMGMIPGQWLKVILGLVLIISA 254

Query: 139 ILMLKRDRLYCERK 152
           + M         + 
Sbjct: 255 LRMFVNHHQSQNKT 268



 Score = 40.4 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 80/238 (33%), Gaps = 19/238 (7%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI-LKDWIFVLP 108
           PVL   F+         + + +  SL  +  + ++          +++ + +   IF   
Sbjct: 30  PVLVGIFKR---SARDAVPINLAISLITLLSSLIIRLRVLHDFPYVSLLVPVGGLIFGGM 86

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLM-------GILMLKRDRLYCERKFPDNYVKYI 161
           +   + +  IS +    L      F +++       G+  L    L     +    V  I
Sbjct: 87  VFAFIGAGWISQIPVHRLEALIRYFLIMIGILLLIEGLFSLPVGHLLRYSLWLQGIVGII 146

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G + G +S  LGV GG      ++F YG  +  A   S  +S       +      G  
Sbjct: 147 CGAMIGIVSSTLGVAGGELIIPTLIFIYGIDVKLAGTASLMISLPTVATGIFRYFRKGLY 206

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                  ++       +  +   S+    L   L  MI  ++L +   +++  ++   
Sbjct: 207 RERKEWTTM-------IAPMGAGSVAGAILGGILMGMIPGQWLKVILGLVLIISALRM 257


>gi|11499103|ref|NP_070337.1| hypothetical protein AF1508 [Archaeoglobus fulgidus DSM 4304]
 gi|2649059|gb|AAB89742.1| predicted coding region AF_1508 [Archaeoglobus fulgidus DSM 4304]
          Length = 480

 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 97/293 (33%), Gaps = 56/293 (19%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++   F  G LSG  G GG  V+ P +                +A+ +++    P ++
Sbjct: 26  LFLLALGFFGGMLSGFIGTGGAFVLTPGMMSI--------GTPGPIAVASNMCHKFPKAM 77

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--------DKSFLNKAFAIFCL 135
           +      +   ++ K+             V   +  H+           +++ AF I   
Sbjct: 78  IGAYRRYKLRQLDPKLALLMATSAIFGVQVGIQVQKHIYELLGPTGTNLYVSVAFLIVLP 137

Query: 136 LMGILMLKR-----------------------------DRLYCERKFPDNYVKYIWGMVT 166
            +  ++++                               +     +    ++    G  T
Sbjct: 138 TVAAVLIRDVVKARRMGISDLEPRFAAKLEQKFRIPPVIKFNIVGREQSAWLTIPLGFGT 197

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           GFL+  + VGG I    ++   GAS   A+ T  G++ ++        I           
Sbjct: 198 GFLAATIAVGGFIGVPSMIYLIGASSAVASGTELGIAFVMGSTGTFTWI----------- 246

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           + LG V++    +IL  S++   +    +  + + Y+ +  + +M   +   A
Sbjct: 247 YLLGAVDLRLTTLILATSLIGVQIGAVGTTYVRQYYIKMAMATVMLLVTLSRA 299


>gi|16263852|ref|NP_436644.1| hypothetical protein SM_b20104 [Sinorhizobium meliloti 1021]
 gi|15139976|emb|CAC48504.1| hypothetical membrane protein [Sinorhizobium meliloti 1021]
          Length = 252

 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 65/195 (33%), Gaps = 14/195 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+  + F++  +S + G GG +++VP++        +   + +   +     ++     
Sbjct: 5   LLLAASGFIAWIVSTIGGGGGAMLLVPLIGFIAGAQAVAPVVAVATLIAGGGRILIF--- 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G I  ++    +    +  V+ +   S+    +L     +F +        
Sbjct: 62  --------FGDIEWRVAAWGLPGAALGGVLGAAAFSNTSAEWLQIVVGLFLISTIFQYGF 113

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             R          +  +    V GFLSG +G  G I   L +   G +  K   T   +S
Sbjct: 114 GRRERTFAV--ATWWFFPAQFVVGFLSGLIGAIGPILNTLYLNA-GITKEKMVGTKTAIS 170

Query: 204 ALIAFPALLVRIYSG 218
             +    L      G
Sbjct: 171 LPMHLAKLRTYTALG 185


>gi|302187690|ref|ZP_07264363.1| hypothetical protein Psyrps6_15144 [Pseudomonas syringae pv.
           syringae 642]
          Length = 243

 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 84/229 (36%), Gaps = 16/229 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++     I    I   +T
Sbjct: 24  AIPALGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALMLIIPSFIFAWLT 83

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGI----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           SL+   +D   +   F  F +++ +     M  R +        + ++  +         
Sbjct: 84  SLLAVRIDPQAMRLGFVGFLMVLTVFNVAQMYWRSKQAAAGLRHEKWLWLLGVGSGVTGG 143

Query: 171 GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
                GG + T +L   +G S   A   +  ++A              + L+    WS+G
Sbjct: 144 LFGVGGGVVATPILTSVFGTSQVVAQGLALSLAAP-----STGITLVTYALHDHVNWSMG 198

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                  + +    +       KL++ + ++ L + F + +   + + A
Sbjct: 199 -------IPLAIGGLASISWGVKLAHSLPERTLRLMFCVFLVLCAVILA 240


>gi|229591391|ref|YP_002873510.1| hypothetical protein PFLU3959 [Pseudomonas fluorescens SBW25]
 gi|229363257|emb|CAY50350.1| putative membrane protein [Pseudomonas fluorescens SBW25]
          Length = 268

 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 57/279 (20%), Positives = 100/279 (35%), Gaps = 44/279 (15%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L  V   L G + GL G GGG++ VP L            + M  A   SL  +   +
Sbjct: 1   MLLASVLGLLMGLVMGLTGAGGGILGVPALVLGL-------GLSMTQAAPVSLLAVGAAA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  ++  RHG +  +       +  + + V       + +  L   F+   +L+   ML
Sbjct: 54  AVGAIDGLRHGLVRYRAALLIALLGALFSPVGVFFAHQLPEPVLMGLFSALMVLVAWRML 113

Query: 143 KRDRLYCERK------------------------FPDNYVKYIWGMVTGFLSGALGVGGG 178
           +R++                                 +      G VTG +SG LGVGGG
Sbjct: 114 QREKREAGPSDHGTASWAQKNCMLDQQTGRFAWTAKCSATLAALGAVTGAVSGLLGVGGG 173

Query: 179 IFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
                         +    ATS  V +L++   +    ++G  +       +G+V IGA 
Sbjct: 174 FLIVPAFKQLTDVQMRGIVATSLMVISLLSLIGVAGAFHAGVRIEP-----IGWVFIGA- 227

Query: 238 LIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                 SI+      +L  +I  + L +GF+ +    + 
Sbjct: 228 ------SIVGMLAGRRLCSVIPARILQVGFASLCVLVAI 260



 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 7/119 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +     ++G +SGL GVGGG ++VP   +          + M   + TSL VI+  S++ 
Sbjct: 154 LAALGAVTGAVSGLLGVGGGFLIVPAFKQL-------TDVQMRGIVATSLMVISLLSLIG 206

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                  G     I   +I    +  +    + S +    L   FA  C+L+ I M+ +
Sbjct: 207 VAGAFHAGVRIEPIGWVFIGASIVGMLAGRRLCSVIPARILQVGFASLCVLVAIGMVVK 265


>gi|57641949|ref|YP_184427.1| hypothetical protein TK2014 [Thermococcus kodakarensis KOD1]
 gi|57160273|dbj|BAD86203.1| hypothetical membrane protein, conserved, DUF81 family
           [Thermococcus kodakarensis KOD1]
          Length = 244

 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 104/260 (40%), Gaps = 22/260 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +DYI + I+A F+   +  + GVG  + +VP +            I + VA  T L +  
Sbjct: 1   MDYIAVGIIA-FILSVIFSIGGVGSAIAIVPTMMWL--------GIPLMVAKPTGLFINT 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            + + + +++ +HG ++ +     + +  I   + +     + K ++   F IF L  G 
Sbjct: 52  LSMLSATIKNIKHGKLDHRFGLPILVMATIFAPLGAYSGKFIPKEYVLWIFIIFLLYSGT 111

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
           +M+       +          + G + GFL G LGVGGG   +  ++  G    K  AT+
Sbjct: 112 MMIFFKPRPRDGDGNHIVEGSLIGGLAGFLGGLLGVGGGGIISPTLIMLGYEPKKVAATT 171

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY-MI 258
           A V    +    L              W +G ++   + ++   +I    L T L +  +
Sbjct: 172 ALVVFFSSLSGFLTY------------WGMGALDWKLLGVVSISAITGGWLGTHLMHFKM 219

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
             + +     +I++  +   
Sbjct: 220 SSEQVKKVIGVILYLIALKM 239



 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 30/74 (40%), Gaps = 1/74 (1%)

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH-VDKSFLNKAF 130
            T+  V+  +S+  F+ +   G ++ K+L            + + ++   +    + K  
Sbjct: 169 ATTALVVFFSSLSGFLTYWGMGALDWKLLGVVSISAITGGWLGTHLMHFKMSSEQVKKVI 228

Query: 131 AIFCLLMGILMLKR 144
            +   L+ + M+ +
Sbjct: 229 GVILYLIALKMVLK 242


>gi|241663816|ref|YP_002982176.1| hypothetical protein Rpic12D_2230 [Ralstonia pickettii 12D]
 gi|240865843|gb|ACS63504.1| protein of unknown function DUF81 [Ralstonia pickettii 12D]
          Length = 257

 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 83/246 (33%), Gaps = 34/246 (13%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L+  F             A+GT L   + T     + HR HG I   I+K      
Sbjct: 27  MTPLLTLMFGF-------SPATAVGTDLAFASLTKGAGTIAHRSHGHIRWDIVKRLCLGS 79

Query: 108 PITTVVTSLM---ISHVDKSFLNKA---FAIFCLLMGILMLKRDRL------YCERKFPD 155
               +VT ++     ++D  +++       +  +L  I +L R R+          +   
Sbjct: 80  LPAALVTVIVLKSAGNLDAEWMHVIRLTIGVSVILTVISLLFRQRVLGWLARNPRYRLQG 139

Query: 156 NYV---KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL- 211
             +     + G V G L     +G G     L+L     +  A                 
Sbjct: 140 TALAAATVLVGAVLGVLVTVSSIGAGAVGATLILILYPELKSA-----------EVAGTD 188

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +        + GL    LG ++   ++ +L  SI    L  +LS  + ++ +    +  +
Sbjct: 189 IAYAVPLTAVAGLGHMYLGTIDWNLLVSLLVGSIPGIWLGARLSKNLPERLVRGALAATL 248

Query: 272 FTTSFV 277
             T+  
Sbjct: 249 TITAIK 254


>gi|254380369|ref|ZP_04995735.1| hypothetical protein SSAG_00037 [Streptomyces sp. Mg1]
 gi|194339280|gb|EDX20246.1| hypothetical protein SSAG_00037 [Streptomyces sp. Mg1]
          Length = 248

 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 89/260 (34%), Gaps = 19/260 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L + A  + G   G  G GG ++ VP L                 A   SL ++ 
Sbjct: 1   MSTLILALAAGAVIGLALGALGGGGSVLAVPALIYLLGF-------TPAAATTASLIIVT 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  +   H   G +  K    +     +  +    + + + ++ L  AFA    L  +
Sbjct: 54  ATSATALYAHAASGNVRWKTGMLFAAAGILPAIAAGTLATRLPEAVLTAAFAAIAALAAL 113

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
            ML+      + K          G   G ++G LGVGGG      ++   G  +  A  T
Sbjct: 114 RMLRPPHPEQQPKPVRPARAAGAGAGLGAVTGFLGVGGGFLAVPALVGVLGLRMRAAVGT 173

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  V  + +  AL  R  +   L+              +      +IL      +L+  I
Sbjct: 174 SLLVITVNSLAALAARAGTSTPLD-----------WAVIAPFTGAAILGAWDGKRLASKI 222

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++++   +   
Sbjct: 223 SGPTLQRIFAIVLLAVAAHM 242



 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 8/97 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR-RHGTINMKILKDWIFVL 107
           VP L            + M  A+GTSL VI   S+ +          ++  ++  +    
Sbjct: 156 VPALVGVL-------GLRMRAAVGTSLLVITVNSLAALAARAGTSTPLDWAVIAPFTGAA 208

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +       + S +    L + FAI  L +   ML  
Sbjct: 209 ILGAWDGKRLASKISGPTLQRIFAIVLLAVAAHMLID 245


>gi|120611714|ref|YP_971392.1| hypothetical protein Aave_3052 [Acidovorax citrulli AAC00-1]
 gi|120590178|gb|ABM33618.1| protein of unknown function DUF81 [Acidovorax citrulli AAC00-1]
          Length = 267

 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 52/273 (19%), Positives = 95/273 (34%), Gaps = 44/273 (16%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              + A F  G + GL GVGGG +M PVL   F        +  H+A+GT L   A T +
Sbjct: 4   LAFVFAGFAVGLIVGLTGVGGGSLMTPVLIFFF-------GVKPHLAIGTDLLFAAFTKM 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------------------- 124
              +   R   +  +++         + ++    +  +  +                   
Sbjct: 57  GGTVSLARQRLVPWRVVALLCAGSIPSALLALWALRTIGPASGTAQHLMTTTLGGALLLT 116

Query: 125 ---FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-VKYIWGMVTGFLSGALGVGGGIF 180
               L KAF             R     +   P ++ +  + G + G L     VG G  
Sbjct: 117 AAATLYKAFVFSPARQAAERAARQSGGEQADRPRHWSLPVLLGALIGTLVTFTSVGAGAI 176

Query: 181 --TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
             T LLM+F    + +  A     +  +              + GL   SLG V+   + 
Sbjct: 177 GVTVLLMVFPLLPLPRVIAADIAYAVPLTL------------VAGLGHASLGSVDWPLLA 224

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            +L  S+    L ++L     ++++    S+++
Sbjct: 225 QLLAGSLPGIWLGSRLVSRAPERFIRSALSVLL 257



 Score = 42.4 bits (99), Expect = 0.083,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   L GTL     VG G + V VL   F L+ +   I   +A         P ++++ 
Sbjct: 156 VLLGALIGTLVTFTSVGAGAIGVTVLLMVFPLLPLPRVIAADIAYA------VPLTLVAG 209

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + H   G+++  +L   +        + S ++S   + F+  A ++     G  ++ 
Sbjct: 210 LGHASLGSVDWPLLAQLLAGSLPGIWLGSRLVSRAPERFIRSALSVLLAWAGAKLVL 266


>gi|254456662|ref|ZP_05070091.1| membrane protein [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083664|gb|EDZ61090.1| membrane protein [Candidatus Pelagibacter sp. HTCC7211]
          Length = 359

 Score = 52.4 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 58/286 (20%), Positives = 101/286 (35%), Gaps = 55/286 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + VFL    V      I+  S + G LSGLFGVGGG +M P L       G+  +     
Sbjct: 1   MEVFLPIAQVFVNPIEILFLSAIVGVLSGLFGVGGGFLMTPFLIFL----GVPPAY---- 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+      I  TSV     H    T++ K+    +    I T +     ++        +
Sbjct: 53  AVANEANNILATSVSGSTTHYLKNTLDYKMGLMIVIGGTIGTSLGIYTFTYFKGIGKIDT 112

Query: 125 FLNKAFAIFCLLMGILML------------------------------KRDRLYCERKFP 154
            ++ A+     ++G LML                               R R    + + 
Sbjct: 113 VISLAYMYILAIIGTLMLVESLGEIDKAKKNLLIKKKLHVHYWIHGLPFRMRFPKSKLYE 172

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLV 213
             +   I G++ GF++  +G+GG       M++           TS  V+  ++      
Sbjct: 173 SAFTPIIIGLLVGFIAAIMGIGGAFILVPAMIYIIKMPTKLVPGTSLFVTIFVSVIVTF- 231

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                     L  ++ G +++  V +++  SI+   L  KL   I 
Sbjct: 232 ----------LHSFNYGSIDLLLVFMLVIGSIIGVQLGQKLGERIN 267



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 8/120 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+   L G ++ + G+GG  ++VP +    +       +   +  GTSL V    SV+  
Sbjct: 178 IIIGLLVGFIAAIMGIGGAFILVPAMIYIIK-------MPTKLVPGTSLFVTIFVSVIVT 230

Query: 87  MEH-RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
             H   +G+I++ ++   +    I   +   +   ++ S L    AI  L++GI +    
Sbjct: 231 FLHSFNYGSIDLLLVFMLVIGSIIGVQLGQKLGERINSSGLRALLAILLLIVGIAIAYDS 290


>gi|323479593|gb|ADX79032.1| conserved hypothetical protein [Enterococcus faecalis 62]
          Length = 259

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 26/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  FLS T+  L G+GGG+++ PVL                +A  +S+ V  
Sbjct: 1   MRVLLIYFITIFLSNTVGALSGMGGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFV 54

Query: 80  PTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAI 132
             S+ S  +  ++G  I  K      F   +  ++  L+++        ++      + I
Sbjct: 55  M-SISSTYKQYQNGVQIEWKKAASISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYII 113

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGAS 191
             L + +++L               +  I G+  G LS  LG+GGG      L+LF+G  
Sbjct: 114 MLLTLVLVLLYNQFSNWHLHLNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMD 173

Query: 192 IYKATATSAGVSALIAFPALL-VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           I  AT  S           L  + + +G+ +            +  +  I+P ++    +
Sbjct: 174 IKSATVYSIITIFFSQLAKLGNIGLTTGFAVFD----------LTMLWAIIPAALFGGYV 223

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTT 274
               S  + ++ +   +S ++F  
Sbjct: 224 GGLFSKKLSQQRVAQIYSFVVFLV 247


>gi|294625607|ref|ZP_06704231.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292600082|gb|EFF44195.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 358

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 69/202 (34%), Gaps = 13/202 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++  +F++G +    G GGGL+ +P L                + +GT+       +
Sbjct: 100 LPWLLCIAFVAGLVDAAVG-GGGLIQLPGLFATLPQQ------APSLILGTNKFSAMFGT 152

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   + R      + +          + + +  +S + +  +     +  + M I  L
Sbjct: 153 AASAWRYARTVRFPWRPVLYATAAAFTFSFLGATAVSLMPRQAVRPLILVLLIAMLIYTL 212

Query: 143 KRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +       +      +        G   GF  G  G G G     L + F+G    +A+
Sbjct: 213 IKKDFGALHRPRQIGRRELATALAMGAAIGFYDGFFGPGTGSFLIFLFIRFFGLDFLRAS 272

Query: 197 ATSAGVSALIAFPALLVRIYSG 218
           A +  V+      AL   + SG
Sbjct: 273 AAAKVVNLATNLAALSFFLPSG 294


>gi|171319794|ref|ZP_02908879.1| protein of unknown function DUF81 [Burkholderia ambifaria MEX-5]
 gi|171094960|gb|EDT39987.1| protein of unknown function DUF81 [Burkholderia ambifaria MEX-5]
          Length = 268

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 50/275 (18%), Positives = 98/275 (35%), Gaps = 40/275 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V     G + GL G GGG++ VP L              M  A   +L  +A ++
Sbjct: 1   MLISLVLGGFVGAVLGLTGAGGGILAVPALVAGMGW-------PMQQATPVALVAVAGSA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +E  R G +  +            T +   +   + +  L   FA+  L++   +L
Sbjct: 54  ALGALEGFRRGLVRYRAALLMAVAGVPLTTLGVRLAHVLPQRVLLALFALTMLVVAGRLL 113

Query: 143 K---------------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
           +                      D       +P        G VTG ++G LGVGGG   
Sbjct: 114 RQALRNAPGDTAESPLCVGRVNPDTGRLVWSWPVGVALASTGAVTGLMTGLLGVGGGFVI 173

Query: 182 NLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             ++  +   S++   ATS  V AL+    ++  + SG               +  +L  
Sbjct: 174 VPMLRKFTNVSMHGVVATSLMVIALVGAGGVVATLVSGARAP-----------LDMMLWF 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
              + +   +    S  +  +++  GF+ ++   +
Sbjct: 223 TVATAIGMAVGRSASRRLSARHVQAGFAAVLVCVA 257



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G   G + G  G GGGI     ++   G  + +A          +A  A+    
Sbjct: 2   LISLVLGGFVGAVLGLTGAGGGILAVPALVAGMGWPMQQA--------TPVALVAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +  G V   A L++    + +T L  +L++++ ++ L   F++ M   +
Sbjct: 54  ALG----ALEGFRRGLVRYRAALLMAVAGVPLTTLGVRLAHVLPQRVLLALFALTMLVVA 109

Query: 276 FV 277
             
Sbjct: 110 GR 111


>gi|89091888|ref|ZP_01164843.1| putative membrane protein [Oceanospirillum sp. MED92]
 gi|89083623|gb|EAR62840.1| putative membrane protein [Oceanospirillum sp. MED92]
          Length = 248

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 83/264 (31%), Gaps = 27/264 (10%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +     ++    +I ++  +  ++   G+GGG++++ +L+       +     +      
Sbjct: 1   MPLQDNLELALFLIFSAAGTSFITAAMGIGGGVLLLAILASVLPPAALIPVHGL------ 54

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
                                I+  ++K +     I   V S ++  +    +    A+F
Sbjct: 55  -----VQLGSNGNRAIMTRQHIDWCMVKSFTAGALIGAFVASFVVIQLPLYLIQLCVALF 109

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
            L +            ++       +   G  T F+S  +G  G       +        
Sbjct: 110 ILFLVW------GPKPKKHQMSEKGQVAAGAGTTFISMFVGATG-PLVAGFVHRQSYEKL 162

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
             TAT A   +      +LV    G+              +  V++++   +  T L  +
Sbjct: 163 TTTATFAACMSFQHLLKMLVFSLVGFAFWQ---------WLPLVILMVLGGMAGTWLGLR 213

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           +   I  ++  I F  ++   +  
Sbjct: 214 MLNKIPTQHFRIIFKTVITLMAVR 237


>gi|257865475|ref|ZP_05645128.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257871811|ref|ZP_05651464.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
 gi|257799409|gb|EEV28461.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257805975|gb|EEV34797.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
          Length = 259

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 93/261 (35%), Gaps = 24/261 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +  +   L+  +  + G+GGG+++ P     F  +G      +     T++  ++  S  
Sbjct: 5   IYFIVIVLANAVGAVSGMGGGVLIKP----IFDFIGAHSVAAISFYSATAVFTMSIVSTA 60

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------LNKAFAIFCLLM 137
             +   R   IN  I         +  ++ ++    +   F       L +       L+
Sbjct: 61  RQLASGRK--INWSIALWVSGGAVLGGILGNVAFERLLLVFRDDKMVQLIQILVTVLTLL 118

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKAT 196
              +  +                  G++ GFL+  LG+GGG     LLML +   I +AT
Sbjct: 119 FAFLYTKYNWR-GFALKKVGWYAACGLILGFLASLLGIGGGPINVSLLMLLFAMPIKEAT 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S           +L   +S            G  ++  +  ++P +I+   +  K S 
Sbjct: 178 IYSICTIFFSQLAKILTIAFSTG---------FGLYDLKVLWFVIPAAIVGGLIGAKASN 228

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
           ++  + +T+ F  ++     +
Sbjct: 229 VLSPQRVTLVFQTVIVLVLLI 249



 Score = 37.7 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 45/120 (37%), Gaps = 10/120 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +        + G L+ L G+GGG + V +L   F       ++ +  A   S+  I  + 
Sbjct: 136 VGWYAACGLILGFLASLLGIGGGPINVSLLMLLF-------AMPIKEATIYSICTIFFSQ 188

Query: 83  VMSFMEHRRH---GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           +   +        G  ++K+L   I    +  ++ +   + +    +   F    +L+ +
Sbjct: 189 LAKILTIAFSTGFGLYDLKVLWFVIPAAIVGGLIGAKASNVLSPQRVTLVFQTVIVLVLL 248


>gi|257083535|ref|ZP_05577896.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
 gi|256991565|gb|EEU78867.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
          Length = 259

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 103/264 (39%), Gaps = 26/264 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  FLS T+  L G+GGG+++ PVL                +A  +S+ V  
Sbjct: 1   MRVLLIYFITIFLSNTVGALSGMGGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFV 54

Query: 80  PTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAI 132
             S+ S  +  ++G  I  K      F   +  ++  L+++        ++      + I
Sbjct: 55  M-SISSTYKQYQNGVQIEWKKAASISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYII 113

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGAS 191
             L + +++L               +  I G+  G LS  LG+GGG      L+LF+G  
Sbjct: 114 MLLTLVLVLLYNQFSNWHLHLNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMD 173

Query: 192 IYKATATSAGVSALIAFPALL-VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           I  AT  S           L  + + +G+ +            +  +  I+P ++    +
Sbjct: 174 IKSATVYSIITIFFSQLAKLGNIGLTTGFAIFD----------LTMLWAIIPAALFGGYV 223

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTT 274
               S  + ++ +   +S+++F  
Sbjct: 224 GGLFSKKLSQQRVAQIYSLVVFLV 247


>gi|171059464|ref|YP_001791813.1| hypothetical protein Lcho_2783 [Leptothrix cholodnii SP-6]
 gi|170776909|gb|ACB35048.1| protein of unknown function DUF81 [Leptothrix cholodnii SP-6]
          Length = 263

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 57/271 (21%), Positives = 104/271 (38%), Gaps = 39/271 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I++ F  G + G+ GVGGG +M P+L   F L          VA+GT L     T V
Sbjct: 9   WLAILSGFGIGLIVGVTGVGGGSLMTPLLISVFHLDK-------AVAIGTDLWFAGLTKV 61

Query: 84  MSFMEHRRHGTINMKILKDWIFV-----LPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                H RHG ++ +I+   +       +  T  + ++ +S    S L+ A  I  +L  
Sbjct: 62  SGSWAHHRHGHVDYRIVALLLGGSIPASIATTAYMHTIGMSKQADSTLSYALGIALVLTA 121

Query: 139 ILMLKRDRL--------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN--LLMLFY 188
           + ++ R                    ++  + G++ G L     +G G      +LML+ 
Sbjct: 122 VTIIFRPVWYRVGLYLERWITPSRQTWLTVLCGLILGVLVSLSSIGAGALGATMILMLYP 181

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
             S  +   +    +  +   A +               +LG V+   +L +L  S+   
Sbjct: 182 RLSTVRLVGSDIAHAVPLTIVAGIGHA------------TLGNVHWALLLELLVGSVPAI 229

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            L  +L+ ++        F+ +    S +FA
Sbjct: 230 WLGARLTKVLPD-----LFTRMALCVSLLFA 255


>gi|23500553|ref|NP_699993.1| hypothetical protein BRA0823 [Brucella suis 1330]
 gi|23464188|gb|AAN33998.1| membrane protein, putative [Brucella suis 1330]
          Length = 316

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 89/273 (32%), Gaps = 56/273 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G LSGLFGVGGG ++ P+L           +I   +A+ T    I  +S
Sbjct: 24  MLVLLGMGAAVGFLSGLFGVGGGFLITPLLIFY--------NIPPAIAVATGANQIIASS 75

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
           V   + H +  T+++K+    +    + +++   + S +         ++  +  F   +
Sbjct: 76  VSGALAHFKRRTLDIKLGLFLVAGGILGSLIGIFVFSWLRDLGQLDLIVSILYVFFLGTI 135

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R      +         G   
Sbjct: 136 GDLMLVESVQALRRAKKGQGGAVRRSGQHTWIHRLPFKMRFRASTIYVSVIPVLGIGFFI 195

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G LS  +GVGGG      +++           TS      +     +++  +        
Sbjct: 196 GLLSSVMGVGGGFIMVPALIYLLHVPTNVVVGTSLFQITFVTAFTTVMQATTNQS----- 250

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 ++I    +++   ++      +    +
Sbjct: 251 ------IDIVLAFLLMVGGVIGAQYGARAGRKL 277


>gi|148262031|ref|YP_001236158.1| hypothetical protein Acry_3050 [Acidiphilium cryptum JF-5]
 gi|146403712|gb|ABQ32239.1| protein of unknown function DUF81 [Acidiphilium cryptum JF-5]
          Length = 261

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 79/225 (35%), Gaps = 22/225 (9%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            +  HVA+GTS   ++  +  +F  H R G +  +    +  +  +     S +    D 
Sbjct: 38  GLAPHVAIGTSALAVSANAFANFGGHARKGNVRWRSAAIFAVLGIVGAAAGSTLGKAFDG 97

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERK-------FPDNYVKYIWGMVTGFLSGALGVG 176
             L   FAI  + +G+LML+  R+                       +  G LSG  G+G
Sbjct: 98  KKLLFLFAILMITVGLLMLRPRRVADGTAGQAERLNAATLLAVAAAALTVGALSGFFGIG 157

Query: 177 GGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           GG      +LF  G  +  A  +S            +    SG             VN  
Sbjct: 158 GGFLIVPGLLFSTGMPMIFAIGSSLLSVGSFGLTTAVNYAASGL------------VNWP 205

Query: 236 AVLIILPISILITPLATKLSYMIGKKY--LTIGFSMIMFTTSFVF 278
             +  +   ++   + T+L+  +  +   L   F+ ++F  +   
Sbjct: 206 VAVEFIVGGVIGGLIGTRLAIHLAGRRAALNRIFAGLVFVVAVYM 250


>gi|320107511|ref|YP_004183101.1| hypothetical protein AciPR4_2314 [Terriglobus saanensis SP1PR4]
 gi|319926032|gb|ADV83107.1| protein of unknown function DUF81 [Terriglobus saanensis SP1PR4]
          Length = 260

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 96/249 (38%), Gaps = 25/249 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            + ++A F + +   +      L+ VP + +          I    A+ T++  +   S+
Sbjct: 1   MIYLIAIFFATSAISVVTGSTSLITVPAMLQF--------HIEPRTALATNMFALTFLSI 52

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + +   R  +++ + +   + +  + +V+ ++++  V  + L+       + + +    
Sbjct: 53  GASLPLSRAKSVDHQPIGVLMLLTFVGSVIGAILLLFVPVTSLSVIVPSAMIGVALFSAF 112

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGV--GGG---IFTNLLMLFYGASIYKATAT 198
             +   ++    +  +   G +  F+ G  G    GG   I T + +  +G S  +A AT
Sbjct: 113 YRKAGSDKVVIHSASRKTIGYLPTFILGMYGGFFSGGYVTILTAVFVTAFGTSFREAIAT 172

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++   +  A  + ++ G     L  + LG       +++         L  +    +
Sbjct: 173 TKLLNICSSAIATAICMWRG-----LIDYRLG-------IVLGITMFFGATLGARFVVRL 220

Query: 259 GKKYLTIGF 267
            +K+L   F
Sbjct: 221 AEKWLRRIF 229


>gi|301381313|ref|ZP_07229731.1| hypothetical protein PsyrptM_01703 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302130051|ref|ZP_07256041.1| hypothetical protein PsyrptN_01585 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
          Length = 248

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 87/229 (37%), Gaps = 16/229 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++     I    I   +T
Sbjct: 29  AIPALGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALMLIIPSFIFAWLT 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGI----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           S++   +D   +   F  F +++ +     M  R+ L   R   + Y+  +         
Sbjct: 89  SMLAVRIDPQSMRLGFVAFLVILTVFNVAQMYWRNTLASGRLRHEKYLWLLGVGSGVTGG 148

Query: 171 GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
                GG + T +L   +GA+   A   +  ++A              + L+    WS+G
Sbjct: 149 LFGVGGGVVATPILTSVFGATQVVAQGLALSLAAP-----STGITLVTYALHDHVNWSMG 203

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                  + +    +       KL++ + ++ L + F + +   + + A
Sbjct: 204 -------IPLAIGGLASISWGVKLAHSLPERTLRLMFCVFLVLCAVILA 245


>gi|91776161|ref|YP_545917.1| hypothetical protein Mfla_1809 [Methylobacillus flagellatus KT]
 gi|91710148|gb|ABE50076.1| protein of unknown function DUF81 [Methylobacillus flagellatus KT]
          Length = 264

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 85/260 (32%), Gaps = 36/260 (13%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + +     G L G  G GGG++ VP+L            I +  A   +L  I   +
Sbjct: 5   VLTLCLLGAAVGLLMGATGAGGGILAVPLLVFF-------TDISLTAAAPVALTAITVAA 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +   + G +  +       +  +   +   +  H+D   L  AFA     +    L
Sbjct: 58  GVGAVAGWKKGVVRYRSACVMAGLGILMAPLGLWLAHHLDNRTLTFAFACVLAFVAAENL 117

Query: 143 KRDRLYCERKFPD----------------NYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
            + +       P                 ++     G + GFLSG +GVGGG      + 
Sbjct: 118 VQKKQRNRPGDPACMIDPATGRFRWTSRCSFWLMSAGSLAGFLSGLVGVGGGFVIVPALN 177

Query: 187 FY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                 ++    TS  V AL++  +L   +  G     L             L  +  S+
Sbjct: 178 RLSNLDMHSVIPTSLAVIALVSLSSLGSALLWGSFDAWL------------ALPFVAGSV 225

Query: 246 LITPLATKLSYMIGKKYLTI 265
           L      +L+  +    L  
Sbjct: 226 LGMAAGRRLAGYLAPASLKR 245



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 11/118 (9%)

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             + G   G L GA G GGGI    L++F+             +S   A P  L  I   
Sbjct: 8   LCLLGAAVGLLMGATGAGGGILAVPLLVFF-----------TDISLTAAAPVALTAITVA 56

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            G+  +  W  G V   +  ++  + IL+ PL   L++ +  + LT  F+ ++   + 
Sbjct: 57  AGVGAVAGWKKGVVRYRSACVMAGLGILMAPLGLWLAHHLDNRTLTFAFACVLAFVAA 114


>gi|302342155|ref|YP_003806684.1| hypothetical protein Deba_0718 [Desulfarculus baarsii DSM 2075]
 gi|301638768|gb|ADK84090.1| protein of unknown function DUF81 [Desulfarculus baarsii DSM 2075]
          Length = 460

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 9/118 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   +   LS   GVGGG + VP L+           + M +  GTS  V+    +
Sbjct: 335 WLPMLGGAVIAALSSFLGVGGGFLYVPFLTTL-------AGLPMFLVAGTSSLVVLVGMI 387

Query: 84  MSFMEHR--RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           +S   +   +   +   ++   +  + I ++V       +    L   F +    +G+
Sbjct: 388 VSIFSYMFGKGVVVEWGLIGAELVGVFIGSMVGPATSKFISDKVLRLIFIVLAFYVGL 445



 Score = 42.4 bits (99), Expect = 0.066,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 11/123 (8%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLV 213
             ++  + G V   LS  LGVGGG      +    G  ++    TS+ V  +    ++  
Sbjct: 333 KAWLPMLGGAVIAALSSFLGVGGGFLYVPFLTTLAGLPMFLVAGTSSLVVLVGMIVSIFS 392

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            ++    +          V  G +   L    + + +    S  I  K L + F ++ F 
Sbjct: 393 YMFGKGVV----------VEWGLIGAELVGVFIGSMVGPATSKFISDKVLRLIFIVLAFY 442

Query: 274 TSF 276
              
Sbjct: 443 VGL 445


>gi|172035493|ref|YP_001801994.1| hypothetical protein cce_0577 [Cyanothece sp. ATCC 51142]
 gi|171696947|gb|ACB49928.1| hypothetical protein cce_0577 [Cyanothece sp. ATCC 51142]
          Length = 270

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 82/235 (34%), Gaps = 16/235 (6%)

Query: 52  LSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM-KILKDWIFVLPIT 110
           L      +G   S  + + +  SL  I  + ++          +   +++   I    I 
Sbjct: 36  LPILAGPLGYSASQVVPLNLAISLITILISLLVRGKILSLSTVMPYSQVIIFLIVGAMIM 95

Query: 111 TVVTSLMISHVDKSFLNKAFAIFCLLMG-ILMLKRDRLYCERKF-PDNYVKYIW-----G 163
             + +    H+    L +   +F +++G  LM++           P      I      G
Sbjct: 96  AFIGASWAKHLSNEKLERIILVFLIIIGCALMIEGFLPESLPALVPSIPGLQIVVALGCG 155

Query: 164 MVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           ++ G +S  LGV GG      ++F +G  I  A  +S  +S       LL   + G  ++
Sbjct: 156 LIIGLVSSLLGVAGGELIIPTLIFAFGVDIKIAGTSSLLISLPTVIVGLLRYHHQGSFVD 215

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             P           VL +   S++   +   L  +I    L I   +I+   +  
Sbjct: 216 KQPLQDT-------VLPMGLGSLIGAIIGGLLVGIIPSNLLKIALGIILNIAALK 263



 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 51/129 (39%), Gaps = 12/129 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I + +    + G +S L GV GG +++P L  AF        + + +A  +SL +  PT 
Sbjct: 148 IVVALGCGLIIGLVSSLLGVAGGELIIPTLIFAF-------GVDIKIAGTSSLLISLPTV 200

Query: 83  VMSFMEHRRHGTI-----NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           ++  + +   G+          +        I  ++  L++  +  + L  A  I   + 
Sbjct: 201 IVGLLRYHHQGSFVDKQPLQDTVLPMGLGSLIGAIIGGLLVGIIPSNLLKIALGIILNIA 260

Query: 138 GILMLKRDR 146
            + +    +
Sbjct: 261 ALKVFLHSK 269


>gi|34498006|ref|NP_902221.1| transmembrane protein [Chromobacterium violaceum ATCC 12472]
 gi|34103861|gb|AAQ60221.1| probable transmembrane protein [Chromobacterium violaceum ATCC
           12472]
          Length = 254

 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 74/206 (35%), Gaps = 13/206 (6%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  +  + + +F +G +    G GGGL+ +P L  A        +       GT+    
Sbjct: 1   MLLSLSFLCLIAFCAGLVDAAVG-GGGLIQIPGLFSAL------PNAAPATIFGTNKLSA 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           A  ++ +   +     +  +++        + +   +  +S + K  +     +  L+M 
Sbjct: 54  AVGTLSAARSYLSRVKLPWRLVLPAAATAFVFSFAGAAAVSQIPKGVIRPLVLVLLLVMA 113

Query: 139 ILMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
           +  L +       K       +  +    G   GF  G  G G G     L + F+    
Sbjct: 114 VYTLWKKDFGKLHKPVAIGRREMAIGMAIGGAIGFYDGLFGPGTGSFLMFLFIRFFAFDF 173

Query: 193 YKATATSAGVSALIAFPALLVRIYSG 218
             A+A +  V+      AL+  + +G
Sbjct: 174 LHASAAAKVVNLTTNVAALIFFVGAG 199


>gi|315606202|ref|ZP_07881229.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315312090|gb|EFU60180.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 266

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 96/264 (36%), Gaps = 23/264 (8%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           S+   +  I L+I     +G LSGLFGVGGGLV+VP L            +    A  TS
Sbjct: 6   SQPLTLRRILLVIATGVGAGFLSGLFGVGGGLVIVPALMAVL-------GMDQRRASATS 58

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA---FA 131
           L  I  T+ +    +  HG ++       +      + +   ++  +    L      F 
Sbjct: 59  LAAIIVTAAVGSGTYALHGEVSWAGAALLVVGALAGSQIGVWLLRRLPAPALPWILIGFT 118

Query: 132 IFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGA 190
           +F ++   L +               +  + G+  G LSG +GVGGG      M L  GA
Sbjct: 119 VFVIVSQYLQVPTREGTVSLTPASCALMILVGLCAGILSGLVGVGGGSVIVPGMELAVGA 178

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
               A  TS  V         +  +                V++   LI+   +    P+
Sbjct: 179 GDLIARGTSLLVMIPTGIAGTVTNLRHRM------------VDLRVGLIVGASAAATAPV 226

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTT 274
              ++ ++      I F+M + T 
Sbjct: 227 GRLVATLVSPSVGAILFNMFLLTI 250



 Score = 38.1 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 7/130 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+I+    +G LSGL GVGGG V+VP +  A     +       +A GTSL V+ PT +
Sbjct: 144 ALMILVGLCAGILSGLVGVGGGSVIVPGMELAVGAGDL-------IARGTSLLVMIPTGI 196

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + + RH  +++++          T  V  L+ + V  S     F +F L +  L + 
Sbjct: 197 AGTVTNLRHRMVDLRVGLIVGASAAATAPVGRLVATLVSPSVGAILFNMFLLTIIALTIV 256

Query: 144 RDRLYCERKF 153
           R R     + 
Sbjct: 257 RIRKKARTQI 266


>gi|153875972|ref|ZP_02003525.1| Protein of unknown function DUF81 [Beggiatoa sp. PS]
 gi|152067564|gb|EDN66475.1| Protein of unknown function DUF81 [Beggiatoa sp. PS]
          Length = 249

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 88/266 (33%), Gaps = 36/266 (13%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           YI L+ +   ++G L+ + G GG  + +P L            +   +A GT+   I   
Sbjct: 5   YILLLFIIGIVAGILNVMAG-GGSALTLPALIFL--------GLDSALANGTNRVAILIQ 55

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +V + +  R+      K             +V ++    +D+ +  +  AI  + + + M
Sbjct: 56  NVFAILSFRQQKVHEFKTSLQMALWTVPGGIVGAIAAVKIDEQWFQRILAIVLIFVVLSM 115

Query: 142 LKRDRLYCER----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG------AS 191
           +                  ++ Y      GF  G + VG G      +           +
Sbjct: 116 IFSPHQRITEFSNDSNTKKWLVYPAMFGIGFYGGFIQVGVGFLIMAALFHLLRLDLVFVN 175

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           ++K       +  +   PAL + I+S         W  G       L +   +      A
Sbjct: 176 MHK-----VFIVFIYTLPALGIFIWS-----DNVDWKWG-------LSLAAGNSCGAWWA 218

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
            +L+   G + +     + +F  +  
Sbjct: 219 AQLAVKKGDRIIRWILLIALFIMALK 244


>gi|229592715|ref|YP_002874834.1| hypothetical protein PFLU5335 [Pseudomonas fluorescens SBW25]
 gi|229364581|emb|CAY52469.1| putative membrane protein [Pseudomonas fluorescens SBW25]
          Length = 248

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 95/265 (35%), Gaps = 25/265 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFG---VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           +V++  L      L G ++G  G    G   + VPV+       GI        ++ T+ 
Sbjct: 1   MVEHEWLTGAGLVLLGVITGFIGTNTGGSVFLTVPVMIWL----GIPP----QSSIATAR 52

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                T           G ++ ++      +     ++ + ++  +D + L+K      L
Sbjct: 53  LASVGTMFAGLRHFHNSGKVDYRLAAPAAALGLAGALIGASLLVQIDPALLHKIIGGLTL 112

Query: 136 LMGILMLKRD--RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
           L+  L L R              +  Y+  +  G + G  G    + T L ++F+  +I 
Sbjct: 113 LLVALSLIRKPHSPKATPSSLRRFCGYVLFVPVGMIGGLFGGQAKLSTYLYIIFFKKTIS 172

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           ++  T      +++  +L++   SG             +N      ++  +++      K
Sbjct: 173 ESMGTRKVGGLILSVGSLIIFGISGI------------INWQYGCCLIIGTLVGANAGAK 220

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVF 278
            +   G K++   F++++   +   
Sbjct: 221 FALQKGDKWMESAFNVVVVALALKM 245


>gi|330722011|gb|EGG99941.1| Putative sulfate permease [gamma proteobacterium IMCC2047]
          Length = 260

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 94/261 (36%), Gaps = 39/261 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L I+A    G   G+ GVGGG +M P+L               HVA+GT L   A T 
Sbjct: 3   IILYILAGASVGLAVGITGVGGGSLMTPLLLLF--------GFPAHVAIGTDLMYAAVTK 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM------ISHVDKSFLNKAFAIFCLL 136
               + H+++ TI ++I+          +++T  +              L  +  +  ++
Sbjct: 55  GGGVVLHKKNNTIRLRIVALLAAGSIPASLITIYILKNHFTSPEYYTRILTNSLGVMLII 114

Query: 137 MGILMLKRDRLYC-ERKFPDN----------YVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
             ++++ + +L     K P             +  + G+V G       VG G F   ++
Sbjct: 115 TALVVMFKQKLQENAEKQPGRLQIWATRHAAPMTVMMGVVLGCFVTLSSVGAGAFGAAIL 174

Query: 186 LFYGASI--YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           L     +       T    +  +   A +  IY            LG V+   +  +L  
Sbjct: 175 LLLYPLLPSIHVIGTDIAHAVPLTLIAGIGHIY------------LGNVDFALLGCLLIG 222

Query: 244 SILITPLATKLSYMIGKKYLT 264
           S+    + TKL   + +  + 
Sbjct: 223 SLPAIYIGTKLGAKLPENIIR 243


>gi|254385267|ref|ZP_05000598.1| hypothetical protein SSAG_04976 [Streptomyces sp. Mg1]
 gi|194344143|gb|EDX25109.1| hypothetical protein SSAG_04976 [Streptomyces sp. Mg1]
          Length = 248

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 92/260 (35%), Gaps = 19/260 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L + A  + G   G  G GG ++ VP L                 A   SL ++ 
Sbjct: 1   MSTLILALAAGAVIGLALGALGGGGSVLAVPALIYLLGF-------TPAAATTASLIIVT 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  +   H   G +  K    +     +  +  + + + + ++ L  AFA    L  +
Sbjct: 54  ATSATALYTHATSGNVRWKTGILFAAAGIVPAIAAATLATRLPEAVLTAAFAAIAALAAL 113

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
            MLK      + +          G   G ++G LGVGGG      ++   G  +  A  T
Sbjct: 114 RMLKPPHPEQQPRPVRPARAAGAGAGLGAVTGFLGVGGGFLAVPSLVGVLGLRMRAAVGT 173

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  V  + +  AL  R  +   L+              +      +IL      +L+  I
Sbjct: 174 SLLVITVNSLAALAARAGTSTPLD-----------WTVIAPFTGAAILGAWDGKRLASKI 222

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F++++ T + + 
Sbjct: 223 SGPTLQRIFAIVLLTVAALM 242



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 1/80 (1%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHR-RHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
            + M  A+GTSL VI   S+ +          ++  ++  +     +       + S + 
Sbjct: 164 GLRMRAAVGTSLLVITVNSLAALAARAGTSTPLDWTVIAPFTGAAILGAWDGKRLASKIS 223

Query: 123 KSFLNKAFAIFCLLMGILML 142
              L + FAI  L +  LML
Sbjct: 224 GPTLQRIFAIVLLTVAALML 243


>gi|315497526|ref|YP_004086330.1| hypothetical protein Astex_0484 [Asticcacaulis excentricus CB 48]
 gi|315415538|gb|ADU12179.1| protein of unknown function DUF81 [Asticcacaulis excentricus CB 48]
          Length = 306

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 8/128 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS- 85
           I   F+ G L+ L GVGGG ++VP +    +       +     +GTSL  I  T++++ 
Sbjct: 179 IAIGFVVGLLAALMGVGGGFLIVPAMIYLLR-------MKASAVVGTSLFQIVITTLVTM 231

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            ++  R+ T++  +    +    I   +     +      +    AI  L+ G+ M    
Sbjct: 232 ILQAVRNHTVDAVLAFILLIGGVIGGQLGIRAATRFRAEQMRVVLAIIILMAGLQMGFTL 291

Query: 146 RLYCERKF 153
            +  E  F
Sbjct: 292 FVPPEDPF 299



 Score = 43.5 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 93/293 (31%), Gaps = 56/293 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+     + G LSGLFGVGGG +M PVL      +GI  S    +A+ +  G +  TS
Sbjct: 14  VWLMAGLGVVVGFLSGLFGVGGGFLMAPVLV----ALGIPPS----IAVASQAGHVLATS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------------KSFLNKAF 130
             S M + R  +++ ++            +    +   +                L    
Sbjct: 66  TSSVMSYGREASVDYRMGGVMAVGGIAGAIAGVEVFRLLRLLGQADLMVAVLYLLLLGTI 125

Query: 131 AIFCLLMGILMLKRDRLYCERKFP------------------------DNYVKYIWGMVT 166
               L   +  L R R     + P                                G V 
Sbjct: 126 GGMMLNESLRALLRARDGLPAERPKVKRPGWLYALPYKMRFPVSGLYISVIPPIAIGFVV 185

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKA-TATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G L+  +GVGGG      M++       A   TS     +     ++++      ++ + 
Sbjct: 186 GLLAALMGVGGGFLIVPAMIYLLRMKASAVVGTSLFQIVITTLVTMILQAVRNHTVDAVL 245

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +           I+L   ++   L  + +     + + +  ++I+       
Sbjct: 246 AF-----------ILLIGGVIGGQLGIRAATRFRAEQMRVVLAIIILMAGLQM 287


>gi|17231398|ref|NP_487946.1| hypothetical protein alr3906 [Nostoc sp. PCC 7120]
 gi|17133040|dbj|BAB75605.1| alr3906 [Nostoc sp. PCC 7120]
          Length = 282

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 74/237 (31%), Gaps = 25/237 (10%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
             A  ++     I    A+  +L ++   S++  + H R G I  K    +     +   
Sbjct: 26  VLALPVLVYVMGIAPKNAIAMTLVIVGTVSLLGSISHWRAGNIRWKTAYIFGGATMLGAF 85

Query: 113 VTSLMIS--HVDKSFLNKAFAIFCLLMGILMLKRD--RLYCERKFPDNY------VKYIW 162
             + + +   +  +     FA+  L+  I+M++R         + P           ++ 
Sbjct: 86  FGARLATLPFITDNIQMLLFALLMLVASIIMIQRSMGTKTTHDELPYPPPVCKHCWLWLM 145

Query: 163 GMVTGFLSGALGVGGG---IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
                       VG G        L+L     +  A  TS  + A+ A    L  +    
Sbjct: 146 SEGIIVGGLTGLVGVGGGFAIIPALVLLAKLPMKAAIGTSLFIIAMNAIAGFLGYL---- 201

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           G   L  WSL F  I A           T +   L+  +    L   F   +   + 
Sbjct: 202 GHITL-DWSLIFSFILAASG-------GTLVGAYLTQFVPATQLQKSFGYFLLAVAA 250



 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 7/107 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
             ++P L            + M  A+GTSL +IA  ++  F+ +  H T++  ++  +I 
Sbjct: 164 FAIIPALVLL-------AKLPMKAAIGTSLFIIAMNAIAGFLGYLGHITLDWSLIFSFIL 216

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
                T+V + +   V  + L K+F  F L +   +L ++R     K
Sbjct: 217 AASGGTLVGAYLTQFVPATQLQKSFGYFLLAVAAFVLFQNRGVFSPK 263


>gi|300857499|ref|YP_003782482.1| hypothetical protein cpfrc_00082 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300684953|gb|ADK27875.1| putative membrane protein [Corynebacterium pseudotuberculosis
           FRC41]
 gi|302329794|gb|ADL19988.1| Putative membrane protein [Corynebacterium pseudotuberculosis 1002]
          Length = 270

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 94/259 (36%), Gaps = 25/259 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++I  + ++G +  + G GGGLV++P++      M +   +   VA+ T+  V    +  
Sbjct: 22  ILIAGAGIAGWIDAMIG-GGGLVLIPLI------MAVAPGLAPVVAIATNKFVAVSGTAS 74

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +   R   ++  ++   + +  + +   +L+ + + K  +        LL GI +  +
Sbjct: 75  AAVTMTRKVGVDSSLVLRLVPIAALCSAGGALLAAWISKDVMRPVVIGLMLLAGIFVAFK 134

Query: 145 DRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
                             +  +         G  G G G+F  +           ++ A 
Sbjct: 135 PEFGQGGHAKSASARRRALAVLATGGIALYDGIFGPGTGMFLIMAFTALLSQDFLRSAAL 194

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  V+      AL+V I +G        WSLG       +++   +I    L  K     
Sbjct: 195 TKVVNTATNLGALVVFIAAG-----HVLWSLG-------IVLAVANIAGAQLGAKTVLAG 242

Query: 259 GKKYLTIGFSMIMFTTSFV 277
           G K L +    ++   S  
Sbjct: 243 GTKILRLALLTLVIVMSIY 261


>gi|257892915|ref|ZP_05672568.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|257897897|ref|ZP_05677550.1| conserved hypothetical protein [Enterococcus faecium Com15]
 gi|257829294|gb|EEV55901.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|257835809|gb|EEV60883.1| conserved hypothetical protein [Enterococcus faecium Com15]
          Length = 275

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 97/262 (37%), Gaps = 24/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  V   L+ T+  + G+GGG+++ P+L        I       ++  +++ V   + V
Sbjct: 1   MIYFVVIVLANTVGAISGMGGGVLIKPILDL------IGAHSVAGISFYSTVAVFTMSIV 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------LNKAFAIFCLL 136
            +  +     ++N +I+        +  VV +++     + F       L + F     L
Sbjct: 55  STVRQVSSGKSLNWQIVGWVSSGAVVGGVVGNIVFEVFLQLFENEKHVQLIQIFLTVLTL 114

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           +            +          I G+V GFL+  LG+GGG     LLML +   I +A
Sbjct: 115 V-FAFFYTKHHQPKFHLTSWTWYLICGVVLGFLASFLGIGGGPVNVSLLMLMFALPIKEA 173

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           T  S           L+    +          S    ++  +  ++P +++      + S
Sbjct: 174 TLYSLSTIFFSQLAKLVTIALTS---------SFMRFDLSMLFYVIPAAVIGGLWGARFS 224

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
            ++  K +T  F  I+     +
Sbjct: 225 RILSPKKVTFIFQAIVIVVLLI 246



 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 10/124 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              ++   + G L+   G+GGG V V +L   F       ++ +  A   SL  I  + +
Sbjct: 134 TWYLICGVVLGFLASFLGIGGGPVNVSLLMLMF-------ALPIKEATLYSLSTIFFSQL 186

Query: 84  MSFMEHRRHGTI---NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
              +      +    ++ +L   I    I  +  +     +    +   F    +++ ++
Sbjct: 187 AKLVTIALTSSFMRFDLSMLFYVIPAAVIGGLWGARFSRILSPKKVTFIFQAIVIVVLLI 246

Query: 141 MLKR 144
            L  
Sbjct: 247 NLYN 250


>gi|134095568|ref|YP_001100643.1| hypothetical protein HEAR2391 [Herminiimonas arsenicoxydans]
 gi|133739471|emb|CAL62522.1| Putative permease [Herminiimonas arsenicoxydans]
          Length = 257

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 89/248 (35%), Gaps = 36/248 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L+  F        +   VA+GT L   + T V     HR  G ++  I+K     
Sbjct: 26  LMTPLLTLLF-------GVSPTVAVGTDLAFASATKVAGTFAHRYRGNVHWHIVKHLCLG 78

Query: 107 LPITTVVTSLMISHVD------KSFLNKAFAIFCLLMGILMLKRDRLY------CERKFP 154
                V+T+L + +           +  + A   +L  I ++ R R+         R+  
Sbjct: 79  ALPAAVLTTLTLKYFGVLDQEIGQIIRYSIAGSVMLTVIALIFRTRMQHWMNAHPGRQIQ 138

Query: 155 DNYV---KYIWGMVTGFLSGALGVGGGIFTNLLMLFY--GASIYKATATSAGVSALIAFP 209
              +     + G + G L     +G G     +++      +  +   T    +  +   
Sbjct: 139 GEKLVVATIVSGAILGTLVTISSIGAGAIGATILVLLYPRLTPAEIAGTDIAYAVPLTAI 198

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           A L              W LG +N   + ++L  S+    L + ++  I +K L +  + 
Sbjct: 199 AALG------------HWWLGSINWELLAMLLLGSVPGITLGSLVARTIPEKVLRVLLAS 246

Query: 270 IMFTTSFV 277
           ++ T +  
Sbjct: 247 VLTTVAVK 254



 Score = 42.4 bits (99), Expect = 0.083,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 47/122 (38%), Gaps = 6/122 (4%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +   IV+  + GTL  +  +G G +   +L   +  +   +        GT +    P 
Sbjct: 142 LVVATIVSGAILGTLVTISSIGAGAIGATILVLLYPRLTPAEIA------GTDIAYAVPL 195

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + ++ + H   G+IN ++L   +        + SL+   + +  L    A     + + +
Sbjct: 196 TAIAALGHWWLGSINWELLAMLLLGSVPGITLGSLVARTIPEKVLRVLLASVLTTVAVKL 255

Query: 142 LK 143
           + 
Sbjct: 256 VY 257


>gi|257882636|ref|ZP_05662289.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257818294|gb|EEV45622.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
          Length = 275

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 24/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  V   L+ T+  + G+GGG+++ P+L        I       ++  +++ V   + V
Sbjct: 1   MIYFVVIVLANTVGAISGMGGGVLIKPILDL------IGAHSVAGISFYSTVAVFTMSIV 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------LNKAFAIFCLL 136
            +  +     ++N +I+        +  VV +++     + F       L + F     L
Sbjct: 55  STVRQVSSGKSLNWQIVGWVSSGAVVGGVVGNIVFEVFLQLFENEKHVQLIQIFLTVLTL 114

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           +            +          I G V GFL+  LG+GGG     LLML +   I +A
Sbjct: 115 V-FAFFYTKHHQPKFHLTSWTWYLICGGVLGFLASFLGIGGGPVNVSLLMLMFALPIKEA 173

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           T  S           L+    +          S    ++  +  ++P +++      + S
Sbjct: 174 TLYSLSTIFFSQLAKLVTIALTS---------SFMRFDLSMLFYVIPAAVIGGLWGARFS 224

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
            ++  K +T  F  I+     +
Sbjct: 225 RVLSPKKVTFIFQAIVIVVLLI 246



 Score = 38.1 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 10/124 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              ++   + G L+   G+GGG V V +L   F       ++ +  A   SL  I  + +
Sbjct: 134 TWYLICGGVLGFLASFLGIGGGPVNVSLLMLMF-------ALPIKEATLYSLSTIFFSQL 186

Query: 84  MSFMEHRRHGTI---NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
              +      +    ++ +L   I    I  +  +     +    +   F    +++ ++
Sbjct: 187 AKLVTIALTSSFMRFDLSMLFYVIPAAVIGGLWGARFSRVLSPKKVTFIFQAIVIVVLLI 246

Query: 141 MLKR 144
            L  
Sbjct: 247 NLYN 250


>gi|11499120|ref|NP_070354.1| hypothetical protein AF1525 [Archaeoglobus fulgidus DSM 4304]
 gi|2649039|gb|AAB89723.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 285

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 45/108 (41%), Gaps = 7/108 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
              G ++G+FG+G G   VPVL+    L        + VA+ TS+ +I   + ++   + 
Sbjct: 172 AFVGLIAGMFGLGAGWANVPVLNLVMLL-------PIRVAVATSMLIILLNTSIAGWVYI 224

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             G +   I       + + + + + +   V  + + +   I  L+  
Sbjct: 225 AKGAVLPDIAVPATVGMALGSKLGASLALKVRPAVIRQVVLIILLIAA 272



 Score = 41.6 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 52/287 (18%), Positives = 98/287 (34%), Gaps = 54/287 (18%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I + S L G L+ L GVGGG++ VP+L+ AF    +D         G  + V   +++
Sbjct: 5   VFIFLFSLLIGILAPLSGVGGGVMFVPLLT-AFSEFDVDYIR------GGGVIVALTSAL 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIFCLLM 137
           +S       G  N++++   + V  +T      +  ++       K ++     I   ++
Sbjct: 58  VSSPAVMMRGFTNLRMVLPLVLVSNLTAFAGGYLGLYISREFPEGKHYITLLLGILLGVI 117

Query: 138 GILMLKRDRLY----------------------------CERKFPDNYVKYIWGMVTGFL 169
            ++ML  +RL                                   +  V  +     G +
Sbjct: 118 LMIMLTTERLEFPESKEEDRIGRFFEMRGACFEPSLGEEISYHASNTPVALLMFAFVGLI 177

Query: 170 SGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +G  G+G G     ++       I  A ATS  +  L    A  V I  G  L       
Sbjct: 178 AGMFGLGAGWANVPVLNLVMLLPIRVAVATSMLIILLNTSIAGWVYIAKGAVLPD----- 232

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
              + + A + +   S     L   L+  +    +     +I+   +
Sbjct: 233 ---IAVPATVGMALGS----KLGASLALKVRPAVIRQVVLIILLIAA 272


>gi|303247313|ref|ZP_07333586.1| protein of unknown function DUF81 [Desulfovibrio fructosovorans JJ]
 gi|302491227|gb|EFL51116.1| protein of unknown function DUF81 [Desulfovibrio fructosovorans JJ]
          Length = 340

 Score = 52.0 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 95/286 (33%), Gaps = 58/286 (20%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++  F  G + G FG+ G  ++ P L+             M  A+GT +  IA  S++S
Sbjct: 22  LVLIGFSVGVIGGFFGMAGAWMVTPGLNIL--------GFPMAFAIGTDIAHIAGKSMIS 73

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLMGIL 140
            M H + G ++ K+    +    I     + ++  ++        +   + +   L+  +
Sbjct: 74  TMRHAKFGNVDYKLGFVMLIGTMIGIECGAQIVMKLERLGTIGPVVRWVYVVLLALISWM 133

Query: 141 MLKRDRLYCERKFPDN--------------------------------YVKYIWGMVTGF 168
           +         +K                                    ++  +   +TG 
Sbjct: 134 VFYDYHKATSKKKSSGESGEGLTWYKTMQRINIPPMMYFKTAGFTCSVWLPILVSYLTGV 193

Query: 169 LSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           L+G LG+GGG+F    +++  G   + A  T      +            G         
Sbjct: 194 LAGFLGIGGGLFRMPALVYLIGCPTHIAVGTDLFEVMISGLYGSFTYALKGR-------- 245

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
               + + AV ++L  + +   + T  +       + + F + +  
Sbjct: 246 ----IELVAVFVMLSGAAIGAQIGTVATKYAKGYGIRLAFGVAVLC 287



 Score = 39.7 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 7/123 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L I+ S+L+G L+G  G+GGGL  +P L               H+A+GT L  +  + 
Sbjct: 181 VWLPILVSYLTGVLAGFLGIGGGLFRMPALVYLI-------GCPTHIAVGTDLFEVMISG 233

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +     +   G I +  +   +    I   + ++   +     +  AF +  L   + ++
Sbjct: 234 LYGSFTYALKGRIELVAVFVMLSGAAIGAQIGTVATKYAKGYGIRLAFGVAVLCCMLSII 293

Query: 143 KRD 145
            + 
Sbjct: 294 LKQ 296


>gi|307308151|ref|ZP_07587866.1| protein of unknown function DUF81 [Sinorhizobium meliloti BL225C]
 gi|306901354|gb|EFN31959.1| protein of unknown function DUF81 [Sinorhizobium meliloti BL225C]
          Length = 252

 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 65/195 (33%), Gaps = 14/195 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+  + F++  +S + G GG +++VP++        +   + +   +     ++     
Sbjct: 5   LLLAASGFIAWIVSTIGGGGGAMLLVPLIGFIAGAQAVAPVVAVATLIAGGGRILIF--- 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G I  ++    +    +  V+ +   S+    +L     +F +        
Sbjct: 62  --------FGDIEWRVAAWGLPGAALGGVLGAAAFSNTSAEWLQIVVGLFLISTIFQYGF 113

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             R          +  +    V GFLSG +G  G I   L +   G +  K   T   +S
Sbjct: 114 GRRERTFAV--ATWWFFPAQFVVGFLSGLIGAIGPILNTLYLNA-GITKEKMVGTKTAIS 170

Query: 204 ALIAFPALLVRIYSG 218
             +    L      G
Sbjct: 171 LPMHLAKLGTYTALG 185


>gi|302205236|gb|ADL09578.1| Predicted membrane protein [Corynebacterium pseudotuberculosis
           C231]
 gi|308275477|gb|ADO25376.1| Putative membrane protein [Corynebacterium pseudotuberculosis I19]
          Length = 270

 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 94/259 (36%), Gaps = 25/259 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++I  + ++G +  + G GGGLV++P++      M +   +   VA+ T+  V    +  
Sbjct: 22  ILIAGAGIAGWIDAMIG-GGGLVLIPLI------MAVAPGLAPVVAIATNKFVAVSGTAS 74

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +   R   ++  ++   + +  + +   +L+ + + K  +        LL GI +  +
Sbjct: 75  AAVTMTRKVGVDSSLVLRLVPIAALCSAGGALLAAWISKDVMRPVVIGLMLLAGIFVAFK 134

Query: 145 DRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
                             +  +         G  G G G+F  +           ++ A 
Sbjct: 135 PEFGQGGHAKSASARRRALAVLATGGIALYDGIFGPGTGMFLIMAFTALLSQDFLRSAAL 194

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  V+      AL+V I +G        WSLG       +++   +I    L  K     
Sbjct: 195 TKVVNTATNLGALVVFIAAG-----HVLWSLG-------IVLAVANIAGAQLGAKTVLAG 242

Query: 259 GKKYLTIGFSMIMFTTSFV 277
           G K L +    ++   S  
Sbjct: 243 GTKILRLALLTLVIVMSIY 261


>gi|227552121|ref|ZP_03982170.1| protein of hypothetical function DUF81 [Enterococcus faecium
           TX1330]
 gi|257895283|ref|ZP_05674936.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|227178761|gb|EEI59733.1| protein of hypothetical function DUF81 [Enterococcus faecium
           TX1330]
 gi|257831848|gb|EEV58269.1| conserved hypothetical protein [Enterococcus faecium Com12]
          Length = 278

 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 97/262 (37%), Gaps = 24/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  V   L+ T+  + G+GGG+++ P+L        I       ++  +++ V   + V
Sbjct: 4   LIYFVVIVLANTVGAISGMGGGVLIKPILDL------IGAHSVAGISFYSTVAVFTMSIV 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------LNKAFAIFCLL 136
            +  +     ++N +I+        +  VV +++     + F       L + F     L
Sbjct: 58  STVRQVSSGKSLNWQIVGWVSSGAVVGGVVGNIVFEVFLQLFENEKHVQLIQIFLTVLTL 117

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           +            +          I G+V GFL+  LG+GGG     LLML +   I +A
Sbjct: 118 V-FAFFYTKHHQPKFHLTSWTWYLICGVVLGFLASFLGIGGGPVNVSLLMLMFALPIKEA 176

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           T  S           L+    +          S    ++  +  ++P +++      + S
Sbjct: 177 TLYSLSTIFFSQLAKLVTIALTS---------SFMRFDLSMLFYVIPAAVIGGLWGARFS 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
            ++  K +T  F  I+     +
Sbjct: 228 RILSPKKVTFIFQAIVIVVLLI 249



 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 10/124 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              ++   + G L+   G+GGG V V +L   F       ++ +  A   SL  I  + +
Sbjct: 137 TWYLICGVVLGFLASFLGIGGGPVNVSLLMLMF-------ALPIKEATLYSLSTIFFSQL 189

Query: 84  MSFMEHRRHGTI---NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
              +      +    ++ +L   I    I  +  +     +    +   F    +++ ++
Sbjct: 190 AKLVTIALTSSFMRFDLSMLFYVIPAAVIGGLWGARFSRILSPKKVTFIFQAIVIVVLLI 249

Query: 141 MLKR 144
            L  
Sbjct: 250 NLYN 253


>gi|304317022|ref|YP_003852167.1| hypothetical protein Tthe_1573 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778524|gb|ADL69083.1| protein of unknown function DUF81 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 137

 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 44/94 (46%)

Query: 59  MGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI 118
           + I  S+  H+A   +L    PT+ ++ + H +   I   I+   I    I + + S + 
Sbjct: 28  LTIFASVEQHLAQSINLLSFIPTASIALLYHLKQKNIMTNIIFYIIISGLIGSFIGSYIS 87

Query: 119 SHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
            ++D  FL K FAIF  LMGI  +   +   E K
Sbjct: 88  IYIDSYFLKKMFAIFLFLMGIYEIISKQKIGESK 121


>gi|262196995|ref|YP_003268204.1| hypothetical protein Hoch_3811 [Haliangium ochraceum DSM 14365]
 gi|262080342|gb|ACY16311.1| protein of unknown function DUF81 [Haliangium ochraceum DSM 14365]
          Length = 252

 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 91/254 (35%), Gaps = 28/254 (11%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    ++I A   +G ++ + G GG ++ +PVL            +  +VA GT+   I 
Sbjct: 4   LLLYPVLIAAGVAAGMINTVAG-GGSMLTLPVLMLL--------GLPANVANGTNRLSIV 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             SV   +  RR G ++   +   I       V+ +L  + + ++ L        + M +
Sbjct: 55  TQSVAGVLSFRRSGKLDQPAMLRVITPTVAGAVIGALTAASIPEAVLEYVLLGTMMTMAV 114

Query: 140 LMLKRDRLYCERK--FPDNYVKYIWGMVTGFLSGALG----VGGGIFTNLLML-FYGASI 192
           L+     L        P +  + + G    F +G  G     G G      +       +
Sbjct: 115 LITLVPGLMSAPPEAAPPSRARRLAGTGALFAAGLYGGFIQAGVGFLLLGALSGVLRYDL 174

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +A A     + + A  AL +  ++G             V     +++   + L + L  
Sbjct: 175 VRANALKLACAGVFAVAALGIFAFAGQ------------VAWLPAVVLAAATTLGSLLGV 222

Query: 253 KLSYMIGKKYLTIG 266
           + +  + ++ L   
Sbjct: 223 RFALNVPQRILRYI 236


>gi|294621481|ref|ZP_06700649.1| hypothetical protein EfmU0317_0925 [Enterococcus faecium U0317]
 gi|291598922|gb|EFF29971.1| hypothetical protein EfmU0317_0925 [Enterococcus faecium U0317]
          Length = 278

 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 24/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  V   L+ T+  + G+GGG+++ P+L        I       ++  +++ V   + V
Sbjct: 4   LIYFVVIVLANTVGAISGMGGGVLIKPILDL------IGAHSVAGISFYSTVAVFTMSIV 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------LNKAFAIFCLL 136
            +  +     ++N +I+        +  VV +++     + F       L + F     L
Sbjct: 58  STVRQVSSGKSLNWQIVGWVSSGAVVGGVVGNIVFEVFLQLFENEKHVQLIQIFLTVLTL 117

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           +            +          I G V GFL+  LG+GGG     LLML +   I +A
Sbjct: 118 V-FAFFYTKHHQPKFHLTSWTWYLICGGVLGFLASFLGIGGGPVNVSLLMLMFALPIKEA 176

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           T  S           L+    +          S    ++  +  ++P +++      + S
Sbjct: 177 TLYSLSTIFFSQLAKLVTIALTS---------SFMRFDLSMLFYVIPAAVIGGLWGARFS 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
            ++  K +T  F  I+     +
Sbjct: 228 RVLSPKKVTFIFQAIVIVVLLI 249



 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 10/124 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              ++   + G L+   G+GGG V V +L   F       ++ +  A   SL  I  + +
Sbjct: 137 TWYLICGGVLGFLASFLGIGGGPVNVSLLMLMF-------ALPIKEATLYSLSTIFFSQL 189

Query: 84  MSFMEHRRHGTI---NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
              +      +    ++ +L   I    I  +  +     +    +   F    +++ ++
Sbjct: 190 AKLVTIALTSSFMRFDLSMLFYVIPAAVIGGLWGARFSRVLSPKKVTFIFQAIVIVVLLI 249

Query: 141 MLKR 144
            L  
Sbjct: 250 NLYN 253


>gi|11497744|ref|NP_068966.1| hypothetical protein AF0127 [Archaeoglobus fulgidus DSM 4304]
 gi|2650522|gb|AAB91106.1| predicted coding region AF_0127 [Archaeoglobus fulgidus DSM 4304]
          Length = 475

 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 101/293 (34%), Gaps = 56/293 (19%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++   F  G LSG  G GG  V+ P +                +A+ +++    P ++
Sbjct: 26  IFLLALGFFGGMLSGFIGSGGAFVLTPGMMSI--------GTPGPIAVASNMCHKFPKAM 77

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS--------FLNKAFAIFCL 135
           +      +   ++ K+             V   +   + ++        +++ AF +   
Sbjct: 78  IGAYRRYKLRQLDPKLAVIMAVSAIAGVQVGIQVQKQIYEALGETGTNLYVSIAFLVVLP 137

Query: 136 LMGILMLK-----------------RDRLYCERKFP------------DNYVKYIWGMVT 166
            + +L+L+                   +L  + + P              ++    G  T
Sbjct: 138 AVSLLLLRDVVRAKKLGISDTESTLPKKLEEKFRLPPRIRFDVVGRTHSAWLTIPLGFGT 197

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           GFL+  + VGG I    ++   GAS   A+ T  G++ ++        I           
Sbjct: 198 GFLAATIAVGGFIGVPSMIYLIGASSAVASGTELGIAFVMGSTGTFTWI----------- 246

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           + LG V+     +IL  S++   +    +  + + Y+ +  + +M   +   A
Sbjct: 247 YLLGAVDFRLTTLILATSLIGVQIGAVGTTYVRQYYIKMAMATVMLLVTLSRA 299


>gi|228946234|ref|ZP_04108565.1| Permease [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228813426|gb|EEM59716.1| Permease [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
          Length = 249

 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 101/265 (38%), Gaps = 38/265 (14%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             + G L G  G+GG  ++ P L       G+  S    VA+GT L   + T +    +H
Sbjct: 2   GLIIGGLVGSTGIGGAALLTPFLLVL----GVSPS----VAVGTDLVYNSITKMFGISQH 53

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
            +  TIN +++K        + V+  +++  +     N+   I   ++G +++       
Sbjct: 54  WKQKTINFRLVKYLAVGSIPSAVIAIIILHFLPILHHNRE-GIIKYMLGYILILAAISII 112

Query: 150 ERKF----------------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASI 192
            +                      +    G++ GF+ G   VG G    + M+F Y    
Sbjct: 113 IKNLYYNEASYNYFQKRTIEQKKSLTIFIGVILGFIVGLTSVGSGSLFAIAMIFLYQLKP 172

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +   T    + ++   A ++ I            +LG V+   ++ +L  SI    L +
Sbjct: 173 PELVGTDITHAFVLVTVASIINI------------NLGNVDYILLIQLLMGSIPGVILGS 220

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           +LS  I  K L +  ++I+  +   
Sbjct: 221 RLSTKIPVKPLQMILAVIICISGLK 245



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 51/140 (36%), Gaps = 7/140 (5%)

Query: 3   DLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGID 62
           +L YN +   +  K  +     L I    + G + GL  VG G +    ++  F      
Sbjct: 115 NLYYNEASYNYFQKRTIEQKKSLTIFIGVILGFIVGLTSVGSGSLF--AIAMIFLYQLKP 172

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             +     +GT +        ++ + +   G ++  +L   +       ++ S + + + 
Sbjct: 173 PEL-----VGTDITHAFVLVTVASIININLGNVDYILLIQLLMGSIPGVILGSRLSTKIP 227

Query: 123 KSFLNKAFAIFCLLMGILML 142
              L    A+   + G+ ++
Sbjct: 228 VKPLQMILAVIICISGLKLI 247


>gi|118594766|ref|ZP_01552113.1| hypothetical protein MB2181_03820 [Methylophilales bacterium
           HTCC2181]
 gi|118440544|gb|EAV47171.1| hypothetical protein MB2181_03820 [Methylophilales bacterium
           HTCC2181]
          Length = 256

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 50/243 (20%), Positives = 87/243 (35%), Gaps = 34/243 (13%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L   F+       I   VA+GT L   A T     M H + G I+ +I+   +   
Sbjct: 27  MTPLLVIIFK-------INPAVAIGTDLLYAAITKSFGVMSHNKFGHIDWRIVGRLLVGS 79

Query: 108 PITTVVTSLMISHVD------------KSFLNKAFAIFCLLMGILMLKRDRLYCERKFP- 154
              +++ +L I  +D               +   F    +L   L++ + +    + F  
Sbjct: 80  IPASILMNLYIQDIDLSSESTISFIEMSLGVALIFTSLSVLSQPLIINKTKKDGWKPFKH 139

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTN--LLMLFYGASIYKATATSAGVSALIAFPALL 212
            N V  + G V G +     VG G      LL+++    I     T    +  +   A  
Sbjct: 140 KNIVTILLGFVLGGMVTLTSVGAGALGVTALLLIYPRMKIKNIIGTDIAHAVPLTLFA-- 197

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
                     GL  + LG V++  +  +L  SI    + + LS  I +  L     +I+ 
Sbjct: 198 ----------GLGHYQLGNVDLVLLGSLLIGSIPGIWIGSYLSSKINEDKLRYILVLILV 247

Query: 273 TTS 275
              
Sbjct: 248 GVG 250



 Score = 44.3 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 50/121 (41%), Gaps = 6/121 (4%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            + I+  F+ G +  L  VG G + V  L   +  M I +       +GT +    P ++
Sbjct: 142 IVTILLGFVLGGMVTLTSVGAGALGVTALLLIYPRMKIKNI------IGTDIAHAVPLTL 195

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + H + G +++ +L   +        + S + S +++  L     +  + +G  +L 
Sbjct: 196 FAGLGHYQLGNVDLVLLGSLLIGSIPGIWIGSYLSSKINEDKLRYILVLILVGVGTELLI 255

Query: 144 R 144
            
Sbjct: 256 N 256


>gi|160874294|ref|YP_001553610.1| hypothetical protein Sbal195_1174 [Shewanella baltica OS195]
 gi|160859816|gb|ABX48350.1| protein of unknown function DUF81 [Shewanella baltica OS195]
 gi|315266527|gb|ADT93380.1| protein of unknown function DUF81 [Shewanella baltica OS678]
          Length = 305

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 93/263 (35%), Gaps = 31/263 (11%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I         +   G GGG++ +PV    F  +   +S     ++ TS  +        
Sbjct: 55  FIFLGITGAIFANSTGAGGGVIFIPV----FSSLNFSESQ----SVATSFMIQCFGMTAG 106

Query: 86  FME---HRRHGTIN---MKILKDWIFVLPITTVVTSLMISHV---DKSFLNKAFAIFCLL 136
            +    H +   +             +    +V+       +     S L+ +F+IF ++
Sbjct: 107 AISWSLHYKKRHLEDAAWSGFVKAALLAAFFSVLGFWSSQLLQLNSPSSLHTSFSIFSIV 166

Query: 137 MGILMLKRDRLYC----ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           +GI ++   +         +  D     + G   G ++  L VG G    + ++  G   
Sbjct: 167 LGIAIVISSKSSTPITRAIRPVDFLWLALIGYFGGIITAWLSVGVGELVVIYLMLRGLCA 226

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A AT   VSA+  + A  + I+S                   VL   P +++   LA 
Sbjct: 227 KMAVATGVIVSAITVWSASPIHIFSTNSHALFEL----------VLFAGPGAVIGGLLAR 276

Query: 253 KLSYMIGKKYLTIGFSMIMFTTS 275
           KL+  +  K L + FS+ +  T 
Sbjct: 277 KLALYLPVKVLKLFFSIWIILTG 299



 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 42/122 (34%), Gaps = 6/122 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              + +  +  G ++    VG G ++V  +    + +       M VA G  +  I   S
Sbjct: 190 FLWLALIGYFGGIITAWLSVGVGELVV--IYLMLRGL----CAKMAVATGVIVSAITVWS 243

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                    +     +++        I  ++   +  ++    L   F+I+ +L G  ML
Sbjct: 244 ASPIHIFSTNSHALFELVLFAGPGAVIGGLLARKLALYLPVKVLKLFFSIWIILTGSAML 303

Query: 143 KR 144
             
Sbjct: 304 AS 305


>gi|194332910|ref|YP_002014770.1| hypothetical protein Paes_0057 [Prosthecochloris aestuarii DSM 271]
 gi|194310728|gb|ACF45123.1| protein of unknown function DUF81 [Prosthecochloris aestuarii DSM
           271]
          Length = 318

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/286 (17%), Positives = 101/286 (35%), Gaps = 50/286 (17%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQL-MGIDDSICMHVAMGTSLGVIAP 80
           ++ ++ V SF  G ++ + GVGGG++ VP++S  F   +    +  + VA+  +L    P
Sbjct: 45  WVSVLFVFSFFLGIIAVIAGVGGGVLFVPIVSGFFPFHIDYVRAAGLLVALSGALSAGTP 104

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
               S          N+++      +  ++++  +++   +  S +  A  +  + + +L
Sbjct: 105 LLRSSLA--------NLRLGLPMALLGSVSSIFGAVVGLALPSSLVQFALGVVIIGIAVL 156

Query: 141 MLKRDRLYCERKFP----------------------------DNYVKYIWGMVTGFLSGA 172
           M+   R     +                                 +  I  +  GF+ G 
Sbjct: 157 MIMSKRSAVPEETEPDCFSQMLQISGLYYDASLQKDVAWNIHRTAMGSILFIFIGFIGGM 216

Query: 173 LGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF 231
            G+G G     +  L  G  +  A  TS  V ++    A+ V +  G  L          
Sbjct: 217 FGLGAGFANVPVFNLLMGVPLKVAVGTSGLVLSINGSAAVWVYLLKGAVLP--------L 268

Query: 232 VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + I AV+ ++  S     +   L      K + I    I+      
Sbjct: 269 IAIPAVVGMMAGS----RIGAWLLPKFHPKSIRIVVISILVLAGVR 310



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 43/114 (37%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
              G + G+FG+G G   VPV +           + + VA+GTS  V++     +   + 
Sbjct: 208 IFIGFIGGMFGLGAGFANVPVFNLLM-------GVPLKVAVGTSGLVLSINGSAAVWVYL 260

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G +   I    +  +   + + + ++       +        +L G+  L +
Sbjct: 261 LKGAVLPLIAIPAVVGMMAGSRIGAWLLPKFHPKSIRIVVISILVLAGVRSLLK 314


>gi|94312445|ref|YP_585655.1| hypothetical protein Rmet_3514 [Cupriavidus metallidurans CH34]
 gi|93356297|gb|ABF10386.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
          Length = 252

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 86/243 (35%), Gaps = 24/243 (9%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGLV VP L   +       ++     +GT+       +  +   + R   I       
Sbjct: 22  GGGLVQVPALFSTY------PNMSPATLIGTTKVASLAGTANAATRYARKVRIYWGATAP 75

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF-----PDNY 157
            +    +  +  +  ++ +    L KA  +  L++ I  + +  L  E         +  
Sbjct: 76  AMLAAFVMAMAGAWTLTKIPAEPLRKALPLVLLVLLIYTVAKKNLGAEHAPTLTGTRERV 135

Query: 158 VKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
              + G V GF  GA G G G     + +  +G     A+A++  V+      ALL+   
Sbjct: 136 AALLAGAVIGFYDGAFGPGTGSFLMIVFVRVFGYDFLHASASAKVVNLATNLAALLLLA- 194

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                      S G +     LI+   ++  + + +KL+   G  ++   F  ++     
Sbjct: 195 -----------SKGHIWWQLGLIMAAANVAGSQVGSKLALRHGSAFVRKVFIAVVSALIL 243

Query: 277 VFA 279
             A
Sbjct: 244 KTA 246


>gi|329754338|gb|AEC03567.1| magnetosome protein MamO [alpha proteobacterium SS-4]
          Length = 594

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 68/219 (31%), Gaps = 48/219 (21%)

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF---LNKAFAIFCLLMGIL 140
            + + + +   +    +K  I       ++   + + +  S    L   FA+      ++
Sbjct: 384 AASLRNDKAQLVQWDKVKPLIPWGVGGVILGYFIGNAIGDSVVGVLLGLFALIMAGKAVV 443

Query: 141 MLKRDRLYCERK--------------------------------FPDNYVKYIWGMVTGF 168
            + +     E                                          + G+  G 
Sbjct: 444 EILQPNAGEETAEAISAAGAEDEMDELMAMADGAARPKAGGVALSEGPVRSAVLGLPMGL 503

Query: 169 LSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            SG LG+ GG+    L  + G  S+  A A S+ +    +    +V  + G         
Sbjct: 504 FSGILGISGGVIEVPLQRYVGRISLQNAIANSSVLVFWASVAGSVVAFFHG--------A 555

Query: 228 SLGFVNIGA----VLIILPISILITPLATKLSYMIGKKY 262
           S G ++  A     L+++P + +   +  +L  ++  + 
Sbjct: 556 STGLIHWEAPVTLALVMIPGAYVGGIVGARLMRVLPVRV 594



 Score = 37.4 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 11/99 (11%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V     G  SG+ G+ GG++ VP+             I +  A+  S  ++   SV   
Sbjct: 495 AVLGLPMGLFSGILGISGGVIEVPLQRYV-------GRISLQNAIANSSVLVFWASVAGS 547

Query: 87  MEHRRHGT----INMKILKDWIFVLPITTVVTSLMISHV 121
           +    HG     I+ +       V+     V  ++ + +
Sbjct: 548 VVAFFHGASTGLIHWEAPVTLALVMIPGAYVGGIVGARL 586


>gi|149910298|ref|ZP_01898942.1| membrane protein, putative [Moritella sp. PE36]
 gi|149806658|gb|EDM66625.1| membrane protein, putative [Moritella sp. PE36]
          Length = 260

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 79/214 (36%), Gaps = 15/214 (7%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M     D  +  +  ++ ++F +G +  + G GGGL++VP    +F L G+       VA
Sbjct: 1   MEIFGADITLWILLALMASAFAAGFIDSVAG-GGGLILVP----SFILAGLPP----QVA 51

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +G    V    ++ +     ++  +    +   I    I   + +  I + D   + K  
Sbjct: 52  LGQEKIVSTLGTIAAIRNFVKNKKVIWTAVASGIPAGLIGAYIGAESILYFDPDTVGKII 111

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG-----MVTGFLSGALGVG-GGIFTNLL 184
                +  ++     +     +   N     +G      V GF  G  G G G +   +L
Sbjct: 112 LGMLPIGILVSFIPKQDNHHSEQAVNTKVIYFGVPLAVFVIGFYDGFFGPGTGSLLILVL 171

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
                  +  A+ATS   +      AL+  + +G
Sbjct: 172 HYLLKFDLVSASATSKLFNFSSNIGALIAFMLAG 205


>gi|170733106|ref|YP_001765053.1| hypothetical protein Bcenmc03_1763 [Burkholderia cenocepacia MC0-3]
 gi|169816348|gb|ACA90931.1| protein of unknown function DUF81 [Burkholderia cenocepacia MC0-3]
          Length = 268

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 98/276 (35%), Gaps = 40/276 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V     G + GL G GGG++ VP L        +  S  M  A   +L  +A ++
Sbjct: 1   MLISLVLGGFVGAVLGLTGAGGGILAVPALV-------VGMSWPMQQATPVALVAVAGSA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +E  R G +  +            T +   +   + +  L   FA+  L++   +L
Sbjct: 54  ALGALEGFRRGLVRYRAALLMAVAGVPLTTLGVRLAHVLPQRLLLTLFALTMLVVAARLL 113

Query: 143 K---------------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
           +                      D       +P        G VTG ++G LGVGGG   
Sbjct: 114 RQALRRQAADTDTSPLCVGRVNPDTGRLVWSWPVGIALASTGAVTGLMTGLLGVGGGFVI 173

Query: 182 NLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             ++  +   S++   ATS  V AL+    +L  + SG               +   L  
Sbjct: 174 VPMLRKFTNVSMHGVVATSLMVIALVGTGGVLATLVSGTRAP-----------LDVTLWF 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              + L        S  +  +++  GF+ ++   + 
Sbjct: 223 TVATALGMAAGRGASRHLAARHVQAGFAAVLVCVAL 258



 Score = 46.2 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G   G + G  G GGGI     L++     + +A          +A  A+    
Sbjct: 2   LISLVLGGFVGAVLGLTGAGGGILAVPALVVGMSWPMQQA--------TPVALVAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +  G V   A L++    + +T L  +L++++ ++ L   F++ M   +
Sbjct: 54  ALG----ALEGFRRGLVRYRAALLMAVAGVPLTTLGVRLAHVLPQRLLLTLFALTMLVVA 109

Query: 276 FV 277
             
Sbjct: 110 AR 111


>gi|330972321|gb|EGH72387.1| hypothetical protein PSYAR_17680 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 248

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 90/229 (39%), Gaps = 16/229 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++     I    I   +T
Sbjct: 29  AIPALGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALMLIIPSFILAWLT 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSG 171
           SL+   +D   +   F  F +++ +  + +     ++           ++ G+ +G   G
Sbjct: 89  SLLAVRIDPQGMRLGFVGFLVVLTVFNVAQMYWRSKQATGGLRHEKWLWLLGVGSGVTGG 148

Query: 172 ALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
             GVGGG+    ++   +G +   A   +  ++A              + L+    WS+G
Sbjct: 149 LFGVGGGVVATPILTSVFGTTQVVAQGLALSLAAP-----STGITLVTYALHDHVNWSMG 203

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                  + +    +       KL++ + ++ L + F + +   + + A
Sbjct: 204 -------IPLAIGGLASISWGVKLAHSLPERTLRLMFCVFLVLCAVILA 245


>gi|18313425|ref|NP_560092.1| hypothetical protein PAE2552 [Pyrobaculum aerophilum str. IM2]
 gi|18160959|gb|AAL64274.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
          Length = 244

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 61/123 (49%), Gaps = 9/123 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++  ++++    G + G+FG+ GG  +VP+L+           + + VA+ TSL +IA T
Sbjct: 125 FLSALLISG--VGFIGGMFGLTGGWAIVPILNLV-------SRLPLKVAVATSLTIIAIT 175

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              + M +  +G +N  I+     ++ +  +V S ++  +  S +  A     ++  I +
Sbjct: 176 YAPALMVYNINGALNAYIVALTAPMVALGALVGSKIMIKIKASVIRYAIIAVMIISAIQL 235

Query: 142 LKR 144
           ++R
Sbjct: 236 IQR 238



 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 80/235 (34%), Gaps = 45/235 (19%)

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS-------FLN 127
           L V   T+V+S   + R G    K+   +  V  +T +V + +  ++ K        ++ 
Sbjct: 11  LAVALTTAVISSRNYIRAGITPFKLALLFGAVASLTAIVGAALGIYIVKQFGKVGEAYVR 70

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV---------------------- 165
            A A   LL+ + M  + + Y E +      K                            
Sbjct: 71  IALASVMLLVVVAMFLKRQDYPEPRPNKIAEKLGLAGFYNDPVRGRVAYVPNRIFLSALL 130

Query: 166 ---TGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
               GF+ G  G+ GG     ++       +  A ATS  + A+   PAL+V   +    
Sbjct: 131 ISGVGFIGGMFGLTGGWAIVPILNLVSRLPLKVAVATSLTIIAITYAPALMVYNIN---- 186

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                   G +N   V +  P+  L   + +K+   I    +      +M  ++ 
Sbjct: 187 --------GALNAYIVALTAPMVALGALVGSKIMIKIKASVIRYAIIAVMIISAI 233


>gi|320354126|ref|YP_004195465.1| permease [Desulfobulbus propionicus DSM 2032]
 gi|320122628|gb|ADW18174.1| permease [Desulfobulbus propionicus DSM 2032]
          Length = 411

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 39/125 (31%), Gaps = 6/125 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I      S        L G GGG +M         L+ +  ++   +  GT    +  + 
Sbjct: 265 IFYPFFLSLAVAIFGVLMGAGGGFIM------NPLLLALFPALPHTIVAGTVTPTVLFSQ 318

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                 + +   IN K+       + +   +   +   +       AF    +++  LML
Sbjct: 319 GSGIYNYSKIKFINWKLGCGIGTAMLLGGFIGPKLTEMITLDQFKFAFGWILIILAALML 378

Query: 143 KRDRL 147
            +   
Sbjct: 379 WQTTP 383


>gi|227553820|ref|ZP_03983869.1| membrane protein [Enterococcus faecalis HH22]
 gi|227177073|gb|EEI58045.1| membrane protein [Enterococcus faecalis HH22]
          Length = 197

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/193 (22%), Positives = 78/193 (40%), Gaps = 15/193 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +  +  FLS T+  L G+GGG+++ PVL                +A  +S+ V  
Sbjct: 1   MRVLLIYFITIFLSNTVGALSGMGGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFV 54

Query: 80  PTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHV-----DKSFLNKA-FAI 132
             S+ S  +  ++G  I  K      F   +  ++  L+++       ++  +    + I
Sbjct: 55  M-SISSTYKQYQNGVQIEWKKAASISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYII 113

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGAS 191
             L + +++L               +  I G+  G LS  LG+GGG      L+LF+G  
Sbjct: 114 MLLTLVLVLLYNQFSNWHLHLNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMD 173

Query: 192 IYKATATSAGVSA 204
           I  AT  S     
Sbjct: 174 IKSATVYSIITIF 186


>gi|229493286|ref|ZP_04387077.1| hypothetical protein RHOER0001_5692 [Rhodococcus erythropolis
           SK121]
 gi|229319788|gb|EEN85618.1| hypothetical protein RHOER0001_5692 [Rhodococcus erythropolis
           SK121]
          Length = 257

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 76/237 (32%), Gaps = 29/237 (12%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L  A           +  A+ TSL VI   S +  +   R   I  ++   +     
Sbjct: 29  VPILVYALGF-------PLPEAIPTSLLVIGVASAVGVISKVRARLIEWRLAAIFAATGV 81

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV---------K 159
           + T+  + +  H+ ++ +   FAI  +L G  ML+            N            
Sbjct: 82  LGTLAGTALGKHLPETAVMIGFAIVMILAGARMLRSPDNPGTACRTSNSGINWRRCAPRS 141

Query: 160 YIWGMVTGFL-SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
              G   G L       GG +    L+L  G  +  A  TS  V    +   L+ +    
Sbjct: 142 IPTGFGVGVLTGLFGVGGGFLIIPALVLLLGIEMSVAVGTSLVVIVANSAAGLIAQADGL 201

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            G            N          +I  + +A +    I    L   F+ ++F  +
Sbjct: 202 GG------------NWPLTAAFAGSAIAGSLVAGRFGTRIATDSLRQWFAYLVFVVA 246



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I   F  G L+GLFGVGGG +++P L            I M VA+GTSL VI   S    
Sbjct: 142 IPTGFGVGVLTGLFGVGGGFLIIPALVLLL-------GIEMSVAVGTSLVVIVANSAAGL 194

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +        N  +   +       ++V     + +    L + FA    ++   +L  
Sbjct: 195 IAQADGLGGNWPLTAAFAGSAIAGSLVAGRFGTRIATDSLRQWFAYLVFVVAGYVLID 252


>gi|145494802|ref|XP_001433395.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400512|emb|CAK65998.1| unnamed protein product [Paramecium tetraurelia]
          Length = 466

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 13/128 (10%)

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
                +  Y  G   GF+SG LG+G G      +L+ G     A+ATSA +  +I+   L
Sbjct: 321 PISRFFKIYAGGFGAGFVSGFLGMGAGFVMVPTLLYSGLIPRCASATSAFIYFMISLNNL 380

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +  + + +    +     G       L ++  S++      K+ Y++  KY  IG+++I+
Sbjct: 381 ITLLTNHYLDQQMILLFTG-------LAVIGGSVIT-----KIGYILLSKY-KIGYTVIL 427

Query: 272 FTTSFVFA 279
              +   A
Sbjct: 428 IVFALDIA 435



 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 45/116 (38%), Gaps = 9/116 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I    F +G +SG  G+G G VMVP L            +    A  TS  +    S+ +
Sbjct: 328 IYAGGFGAGFVSGFLGMGAGFVMVPTLLY--------SGLIPRCASATSAFIYFMISLNN 379

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            +    +  ++ +++  +  +  I   V + +   +   +    + +  ++  + +
Sbjct: 380 LITLLTNHYLDQQMILLFTGLAVIGGSVITKIGYILLSKY-KIGYTVILIVFALDI 434


>gi|172060719|ref|YP_001808371.1| hypothetical protein BamMC406_1668 [Burkholderia ambifaria MC40-6]
 gi|171993236|gb|ACB64155.1| protein of unknown function DUF81 [Burkholderia ambifaria MC40-6]
          Length = 268

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/275 (18%), Positives = 97/275 (35%), Gaps = 40/275 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V     G + GL G GGG++ VP L              M  A   +L  +A ++
Sbjct: 1   MLISLVLGGFVGAVLGLTGAGGGILAVPALVAGMGW-------PMQQATPVALVAVAGSA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +E  R G +  +            T +   +   + +  L   FA+  L++   +L
Sbjct: 54  ALGALEGFRRGLVRYRAALLMAVAGMPLTTLGVRLAHVLPQRVLLALFALTMLVVAGRLL 113

Query: 143 K---------------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
           +                      D       +P        G VTG ++G LGVGGG   
Sbjct: 114 RQALRNAPGDTAESPLCVGRVNPDTGRLVWSWPVGVALASTGAVTGLMTGLLGVGGGFVI 173

Query: 182 NLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             ++  +   S++   ATS  V AL+    +   + SG               +  +L  
Sbjct: 174 VPMLRKFTNVSMHGVVATSLMVIALVGTGGVFATLVSGTRAP-----------LDMMLWF 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
              + L   +    S  +  +++  GF+ ++   +
Sbjct: 223 TVATALGMAVGRSASRHLSARHVQAGFAAVLVCVA 257



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G   G + G  G GGGI     ++   G  + +A          +A  A+    
Sbjct: 2   LISLVLGGFVGAVLGLTGAGGGILAVPALVAGMGWPMQQA--------TPVALVAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +  G V   A L++    + +T L  +L++++ ++ L   F++ M   +
Sbjct: 54  ALG----ALEGFRRGLVRYRAALLMAVAGMPLTTLGVRLAHVLPQRVLLALFALTMLVVA 109

Query: 276 FV 277
             
Sbjct: 110 GR 111


>gi|167042053|gb|ABZ06788.1| putative domain of unknown function DUF81 [uncultured marine
           microorganism HF4000_141I21]
          Length = 359

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 54/220 (24%), Positives = 83/220 (37%), Gaps = 44/220 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I LI+  SF+ G LSGLFGVGGG +M P L      MGI  +     A+      I  +S
Sbjct: 14  IILILFVSFVIGFLSGLFGVGGGFLMTPFLIF----MGIPPAF----AVANEANNILASS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH------------VDKSFLNKAF 130
               + H    T+++KI    I    + T++  +  S+            +   ++    
Sbjct: 66  TSGTLTHWFKKTMDLKIGWLIIGGGSVGTLLGIITFSYFKEIGKIDLIITLSYMYVLAIL 125

Query: 131 AIFCLLMGIL-----------------------MLKRDRLYCERKFPDNYVKYIWGMVTG 167
             F L  GI+                       +  R R    + +    V  I G+  G
Sbjct: 126 GSFMLRDGIMEIDRIKKKVIIKKKLHTHYWIHGLPFRMRFKKSQIYESALVPIILGLFVG 185

Query: 168 FLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALI 206
           F++  +GVGG       M++  G  I     TS  V+  I
Sbjct: 186 FIAAIMGVGGAFLMVPAMIYLIGMPIKLIPGTSLFVTIFI 225



 Score = 35.4 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 50/130 (38%), Gaps = 8/130 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K  + +   + I+     G ++ + GVGG  +MVP +            + + +  GTSL
Sbjct: 167 KSQIYESALVPIILGLFVGFIAAIMGVGGAFLMVPAMIYLI-------GMPIKLIPGTSL 219

Query: 76  G-VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
              I  T  +  +    + TI++ ++   I            +   +  S L    ++  
Sbjct: 220 FVTIFITGFVVVLHAFSYQTIDLILVLILIAGSIAGVHSGQKIGQRLKGSELKTLLSLLM 279

Query: 135 LLMGILMLKR 144
           L +G+LM   
Sbjct: 280 LSVGVLMAYD 289


>gi|163868912|ref|YP_001610139.1| hypothetical protein Btr_1874 [Bartonella tribocorum CIP 105476]
 gi|161018586|emb|CAK02144.1| putative membrane protein [Bartonella tribocorum CIP 105476]
          Length = 308

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 53/129 (41%), Gaps = 8/129 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-T 81
           I  ++    + G LS + G+GGG  M+P L    +       +  +V +GTSL  I   +
Sbjct: 177 IVPVLGIGLIVGLLSSIMGIGGGFFMIPALIYLLR-------VPTNVVIGTSLFQITFVS 229

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + ++   H ++++ +    +    I     +     +    L  A A   L++ + +
Sbjct: 230 SFTTVLQSMTHQSVDIVLAFLLMLGGSIGAQYGTRAGRKLKAEQLRMALACLVLIVCMRL 289

Query: 142 LKRDRLYCE 150
             +  +  +
Sbjct: 290 AFQLFVRPD 298



 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 44/121 (36%), Gaps = 12/121 (9%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
              G++ G LS  +G+GGG F    +++           TS      ++    +++  + 
Sbjct: 181 LGIGLIVGLLSSIMGIGGGFFMIPALIYLLRVPTNVVIGTSLFQITFVSSFTTVLQSMTH 240

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             ++           + A L++L  SI      T+    +  + L +  + ++       
Sbjct: 241 QSVDI----------VLAFLLMLGGSI-GAQYGTRAGRKLKAEQLRMALACLVLIVCMRL 289

Query: 279 A 279
           A
Sbjct: 290 A 290


>gi|115351723|ref|YP_773562.1| hypothetical protein Bamb_1671 [Burkholderia ambifaria AMMD]
 gi|115281711|gb|ABI87228.1| protein of unknown function DUF81 [Burkholderia ambifaria AMMD]
          Length = 268

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/275 (18%), Positives = 97/275 (35%), Gaps = 40/275 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V     G + GL G GGG++ VP L              M  A   +L  +A ++
Sbjct: 1   MLISLVLGGFVGAVLGLTGAGGGILAVPALVAGMGW-------PMQQATPVALVAVAGSA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +E  R G +  +            T +   +   + +  L   FA+  L++   +L
Sbjct: 54  ALGALEGFRRGLVRYRAALLMAVAGVPLTTLGVRLAHVLPQRVLLALFALTMLVVAGRLL 113

Query: 143 K---------------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
           +                      D       +P        G VTG ++G LGVGGG   
Sbjct: 114 RQALRNAPGDTAESPLCVGRVNPDTGRLVWSWPVGVALASTGAVTGLMTGLLGVGGGFVI 173

Query: 182 NLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             ++  +   S++   ATS  V AL+    +   + SG               +  +L  
Sbjct: 174 VPMLRKFTNVSMHGVVATSLMVIALVGTGGVFATLVSGTRAP-----------LDMMLWF 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
              + L   +    S  +  +++  GF+ ++   +
Sbjct: 223 TVATALGMAVGRSASRHLSARHVQAGFAAVLVCVA 257



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G   G + G  G GGGI     ++   G  + +A          +A  A+    
Sbjct: 2   LISLVLGGFVGAVLGLTGAGGGILAVPALVAGMGWPMQQA--------TPVALVAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +  G V   A L++    + +T L  +L++++ ++ L   F++ M   +
Sbjct: 54  ALG----ALEGFRRGLVRYRAALLMAVAGVPLTTLGVRLAHVLPQRVLLALFALTMLVVA 109

Query: 276 FV 277
             
Sbjct: 110 GR 111


>gi|75907280|ref|YP_321576.1| hypothetical protein Ava_1057 [Anabaena variabilis ATCC 29413]
 gi|75701005|gb|ABA20681.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
          Length = 125

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 60/125 (48%), Gaps = 8/125 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I + ++   ++G +SG+ G+GGG++++P L                 A GT+L ++ 
Sbjct: 1   MNSILICLILGLVAGIVSGMTGIGGGIIILPALIFLLGF-------SQQQAQGTTLALLV 53

Query: 80  P-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           P   +++   + + G +++K+         +   + + + + +    L+K FA+  ++  
Sbjct: 54  PPIDLLAAWVYYKQGYVDIKVAALICLGFILGGWLGAKVGTDLPTGTLSKIFAVLMIISA 113

Query: 139 ILMLK 143
           + +L 
Sbjct: 114 LKVLF 118


>gi|108805151|ref|YP_645088.1| hypothetical protein Rxyl_2348 [Rubrobacter xylanophilus DSM 9941]
 gi|108766394|gb|ABG05276.1| protein of unknown function DUF81 [Rubrobacter xylanophilus DSM
           9941]
          Length = 293

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 88/260 (33%), Gaps = 26/260 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++ +    +  + G  G+  G+    +L        +  ++     +GT+L       
Sbjct: 4   LIVLALVGLAAQLVDGSLGMAYGVTSTTLLLAVGITPALASTVVHISEVGTTLA------ 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMGILM 141
             S + H R G ++ + +        +   V + ++ S +         AIF   +G  +
Sbjct: 58  --SGVSHWRFGNVDWEKVGWLAVPGGVGAFVGAVVLSSFISAEAAEPIVAIFLFCLGGYV 115

Query: 142 L------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYK 194
           L      +R RL   R+ P   +  + G+V GFL    G G G      L+        K
Sbjct: 116 LARFAFDRRGRLIEARRVPRRLLSPL-GLVAGFLDALGGGGWGPIGTSTLLSSRRMEPRK 174

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
              T      ++A  A    + S          S   V    V  +L   ++  P+A  +
Sbjct: 175 VVGTVDTSEFIVALSASAGFLVS---------LSFSEVPWSIVGALLAGGLVAAPIAAWI 225

Query: 255 SYMIGKKYLTIGFSMIMFTT 274
              +  + L       +  T
Sbjct: 226 VRHLNARVLGTAVGGFILLT 245


>gi|269961170|ref|ZP_06175538.1| hypothetical protein VME_19220 [Vibrio harveyi 1DA3]
 gi|269834121|gb|EEZ88212.1| hypothetical protein VME_19220 [Vibrio harveyi 1DA3]
          Length = 263

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 77/208 (37%), Gaps = 15/208 (7%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A    L ++      +   H R+  +  ++LK  +    +  V+  L +S   +S L   
Sbjct: 60  AAAILLPILLVMDAFAVRHHYRNADV--RVLKTMLPGALLGVVLAGLFLSITPESGLKIT 117

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
             +  LL                       +IW  ++GF S A+  GGG   ++ +L   
Sbjct: 118 VGVLSLLFCFQYWLSG---ETPSQSGKLGAWIWSTLSGFSSTAIHAGGGP-ASIYLLPLK 173

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
            +     AT A +  ++    L+  I+ G   +          N+   L+++P++ +   
Sbjct: 174 LTKITLIATMAVLFGIVNVAKLVPYIWLGEFDST---------NLMTALVLIPLAPVGVK 224

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           +   L + + ++ +     + +F +   
Sbjct: 225 MGVYLLHRVSQERIYQLCYLFLFLSGAK 252


>gi|253701432|ref|YP_003022621.1| hypothetical protein GM21_2830 [Geobacter sp. M21]
 gi|251776282|gb|ACT18863.1| protein of unknown function DUF81 [Geobacter sp. M21]
          Length = 245

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 54/153 (35%), Gaps = 4/153 (2%)

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           T+L +    S ++    RR G  + ++   +       + +   +   + +        +
Sbjct: 48  TALLLNIMVSSVAAYSFRRAGHFSWRLFWPFAATSIPFSFLGGYLS--LPQHLYRPLVGV 105

Query: 133 FCLLMGILMLKRDRLYCER-KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
             L     +L          + P   V  + G V G LSG  GVGGGIF + L++     
Sbjct: 106 ILLASACRLLVHKEPEVGSLRRPPLTVALLMGAVLGLLSGLTGVGGGIFLSPLLMLLRWG 165

Query: 192 IYKAT-ATSAGVSALIAFPALLVRIYSGWGLNG 223
             +     +A    + +   LL    S   + G
Sbjct: 166 RAREVSGVAALFILVNSCSGLLGHASSLQMVPG 198


>gi|168702496|ref|ZP_02734773.1| hypothetical protein GobsU_23412 [Gemmata obscuriglobus UQM 2246]
          Length = 313

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 90/256 (35%), Gaps = 32/256 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVM----VPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
            L++V + +   +    G   GL++    +P+L       G   +        T+L V  
Sbjct: 6   VLLLVGTGVISFVLSYVGAAAGLILGHLRLPLLVYVL---GNPIAGA-----STNLAVSG 57

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++   ++H R G ++ K+L        I  V   L    V   + +       +  G 
Sbjct: 58  AGALAGSLKHVRDGRVSGKVLLMMGLPSMIGAVTGVLFFVSVSPVWSHVVIGAMLVYSGG 117

Query: 140 LMLKRDRLYCERKF-----PDNYVKY---IWGMVTGFLSGALGVGGGIFTNLLML-FYGA 190
            +++  R   +        P  ++     + G++ G ++   G+  G     +M+ +   
Sbjct: 118 ELVRAGRKEEKGAAAPAGKPGRWLAVWEIVIGLILGAVAAITGLMLGTIRLPMMIRWLRI 177

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
               A  ++  +    A  A +    +G GL+ L            +LI+ P +IL +  
Sbjct: 178 DPAVAVGSNMVIGCATAVAAAITAWGAGGGLHPLS-----------LLIVGPPTILGSYF 226

Query: 251 ATKLSYMIGKKYLTIG 266
             + +  +    L   
Sbjct: 227 GARKTGKLSPAKLKRL 242


>gi|240172800|ref|ZP_04751459.1| hypothetical protein MkanA1_26042 [Mycobacterium kansasii ATCC
           12478]
          Length = 289

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 7/94 (7%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VP L  A           M VA+GTSL VIA +S    +     G I   +   +   
Sbjct: 194 VIVPALVLAL-------DYEMPVAVGTSLLVIAISSAEGVLFRLSSGGIEWGVAIPFTAG 246

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +  ++  ++ S V  + L + F    + +   
Sbjct: 247 GIVGVLLGDMIASRVPAARLTRWFVWLLVAVACY 280



 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 82/273 (30%), Gaps = 58/273 (21%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP L               H A  TSL  +  T+++  + H R G++ +     +  
Sbjct: 29  ILAVPALVY-------GVGETAHTATATSLVTVGATALVGMVGHLRTGSVRLFSGLTFGL 81

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD------------------RL 147
                +++ SL+   V    L  +F+   L+    M  R                   R 
Sbjct: 82  AGLGGSLLGSLLSRAVPNDVLLLSFSALILVAAWRMHARQAETPCHTRQLATVAADGARD 141

Query: 148 YCERKFPDNYVKYIWGMVTG------FLSGALGVGGG---------------IFTNLLML 186
                   +      G V+G        +  + + G                +    L+L
Sbjct: 142 QSASVRDASPATKSAGNVSGHRRTVTATAWRVLIAGSVVGFLTGFFGVGGGFVIVPALVL 201

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
                +  A  TS  V A+ +   +L R+ SG             +  G  +      I+
Sbjct: 202 ALDYEMPVAVGTSLLVIAISSAEGVLFRLSSGG------------IEWGVAIPFTAGGIV 249

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              L   ++  +    LT  F  ++   +   A
Sbjct: 250 GVLLGDMIASRVPAARLTRWFVWLLVAVACYTA 282


>gi|225011754|ref|ZP_03702192.1| protein of unknown function DUF81 [Flavobacteria bacterium
           MS024-2A]
 gi|225004257|gb|EEG42229.1| protein of unknown function DUF81 [Flavobacteria bacterium
           MS024-2A]
          Length = 251

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 57/139 (41%), Gaps = 9/139 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++IV  F +G ++ L G GG L  +PVL       G+  +    +A GT+   I   S+
Sbjct: 8   VILIVVGFFAGVINTLAG-GGSLFTLPVLIFL----GLPPN----IANGTNRIAIVIQSL 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + ++  G  N            I  V+ + +   +D    N+  AI  +++G L+L 
Sbjct: 59  SGALGYKSKGISNFPFNIYLGISASIGAVIGAQIAIDLDGRLFNRILAIILIVVGGLILM 118

Query: 144 RDRLYCERKFPDNYVKYIW 162
             +    +       KY+ 
Sbjct: 119 NAKNLTHKLPERLTGKYLL 137



 Score = 38.9 bits (90), Expect = 0.91,   Method: Composition-based stats.
 Identities = 15/120 (12%), Positives = 39/120 (32%), Gaps = 13/120 (10%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
             +  + G   G ++   G GG +FT  +++F G     A  T+     + +    L   
Sbjct: 7   AVILIVVGFFAGVINTLAG-GGSLFTLPVLIFLGLPPNIANGTNRIAIVIQSLSGALGYK 65

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G              N    + +   + +   +  +++  +  +      ++I+    
Sbjct: 66  SKGIS------------NFPFNIYLGISASIGAVIGAQIAIDLDGRLFNRILAIILIVVG 113


>gi|33867182|ref|NP_898740.1| putative permease [Rhodococcus erythropolis]
 gi|77454708|ref|YP_345576.1| hypothetical protein pREL1_0141 [Rhodococcus erythropolis PR4]
 gi|33669016|gb|AAP74010.1| putative permease [Rhodococcus erythropolis]
 gi|77019708|dbj|BAE46084.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
           PR4]
          Length = 258

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 76/237 (32%), Gaps = 29/237 (12%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L  A           +  A+ TSL VI   S +  +   R   I  ++   +     
Sbjct: 30  VPILVYALGF-------PLPEAIPTSLLVIGVASAVGVISKVRARLIEWRLAAIFAATGV 82

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV---------K 159
           + T+  + +  H+ ++ +   FAI  +L G  ML+            N            
Sbjct: 83  LGTLAGTALGKHLPETAVMIGFAIVMILAGARMLRSPDNPGTACRTSNSGINWRRCAPRS 142

Query: 160 YIWGMVTGFL-SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
              G   G L       GG +    L+L  G  +  A  TS  V    +   L+ +    
Sbjct: 143 IPTGFGVGVLTGLFGVGGGFLIIPALVLLLGIEMSVAVGTSLVVIVANSAAGLIAQADGL 202

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            G            N          +I  + +A +    I    L   F+ ++F  +
Sbjct: 203 GG------------NWPLTAAFAGSAIAGSLVAGRFGTRIATDSLRQWFAYLVFVVA 247



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I   F  G L+GLFGVGGG +++P L            I M VA+GTSL VI   S    
Sbjct: 143 IPTGFGVGVLTGLFGVGGGFLIIPALVLLL-------GIEMSVAVGTSLVVIVANSAAGL 195

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +        N  +   +       ++V     + +    L + FA    ++   +L  
Sbjct: 196 IAQADGLGGNWPLTAAFAGSAIAGSLVAGRFGTRIATDSLRQWFAYLVFVVAGYVLID 253


>gi|301064479|ref|ZP_07204889.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300441417|gb|EFK05772.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 472

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 47/123 (38%), Gaps = 9/123 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            + IV       L+   GVGGG + VP L+           + M +  GTS   +    +
Sbjct: 344 WIPIVGGLFIAALASFLGVGGGFLFVPFLTAV-------AGLPMFLVAGTSGLAVLVGMI 396

Query: 84  MSFMEHR--RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +S   +   +   ++  ++   +  + +  ++      ++    L+  F +   L+GI  
Sbjct: 397 VSIFTYMVAKQIPVHWSLIGAELVGIFVGAMIGPRTQKYLSDKALSILFIVLAFLVGIRY 456

Query: 142 LKR 144
             +
Sbjct: 457 TLK 459



 Score = 42.0 bits (98), Expect = 0.096,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 56/176 (31%), Gaps = 11/176 (6%)

Query: 104 IFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG 163
           + +  I  +  +LM S    + +  A  +    +      R   Y        ++  + G
Sbjct: 291 LLITLIGALWGNLMRSMQWYALIVVACGVVLGFIIAKGKVRFTFYGVEFGFKGWIPIVGG 350

Query: 164 MVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           +    L+  LGVGGG      +    G  ++    TS     +    ++   + +     
Sbjct: 351 LFIAALASFLGVGGGFLFVPFLTAVAGLPMFLVAGTSGLAVLVGMIVSIFTYMVAKQIP- 409

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                    V+   +   L    +   +  +    +  K L+I F ++ F     +
Sbjct: 410 ---------VHWSLIGAELVGIFVGAMIGPRTQKYLSDKALSILFIVLAFLVGIRY 456


>gi|261883889|ref|ZP_06007928.1| hypothetical protein CfetvA_01181 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 84

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 7/91 (7%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
           +SG+FG+GGG ++VP +   F           HVA+GTS+ ++  +++++   H   G +
Sbjct: 1   MSGMFGIGGGSIIVPAMILLFLF-------PPHVAVGTSMFMVFLSALVNSATHISLGNV 53

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
                   I    +   + + + S +    L
Sbjct: 54  PWLYTIPVIPAAYVGAKLGAYLNSKLKSETL 84



 Score = 42.4 bits (99), Expect = 0.073,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 35/96 (36%), Gaps = 13/96 (13%)

Query: 169 LSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
           +SG  G+GGG      M L +    + A  TS  +  L A       I            
Sbjct: 1   MSGMFGIGGGSIIVPAMILLFLFPPHVAVGTSMFMVFLSALVNSATHI------------ 48

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           SLG V     + ++P + +   L   L+  +  + L
Sbjct: 49  SLGNVPWLYTIPVIPAAYVGAKLGAYLNSKLKSETL 84


>gi|83646362|ref|YP_434797.1| permease [Hahella chejuensis KCTC 2396]
 gi|83634405|gb|ABC30372.1| predicted Permease [Hahella chejuensis KCTC 2396]
          Length = 374

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 56/258 (21%), Positives = 99/258 (38%), Gaps = 31/258 (12%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQL---MGIDDSICMHVAMGTSLGVIAPTS 82
           I +A  L    +G   +GGG +  PVL   F +   +G D S  +  A+G +   I   +
Sbjct: 44  IALAMALGSYAAGSTPMGGGTIGFPVLVLLFDMPATLGRDFSFAVQ-AIGMTSASIFILA 102

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL-MISHVDKSFLNKAFAIFCLLMGILM 141
                   R   +   +L   +F   I T +    +  +V    +   FA+     GIL 
Sbjct: 103 --------RRQPLAWSMLFGAMFGALIGTPLGIFFIAPYVPGLLIKVVFAVIWASFGILH 154

Query: 142 LKRDRLYCERK---FPDNYVKYIWGMVTGF-----LSGALGVGGG-IFTNLLMLFYGASI 192
           L R R           D +  +  G++ G      ++   GVG   +  + L+L   A +
Sbjct: 155 LYRIREIAGHSGMTEFDEHWDFRVGVMLGLCAGASVASVTGVGIDMVIYSALVLLCRADL 214

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A  TS  + A  +   ++V+  S     G+      + N  A   I+    L  PL  
Sbjct: 215 KIAIPTSVVIMAFTSVLGVVVKNLSTGMQPGV------YENWLAAAPIVA---LGAPLGA 265

Query: 253 KLSYMIGKKYLTIGFSMI 270
            +  +IG+K   +  +++
Sbjct: 266 YIVDLIGRKPTLLFVAVL 283


>gi|126738645|ref|ZP_01754350.1| hypothetical protein RSK20926_09272 [Roseobacter sp. SK209-2-6]
 gi|126720444|gb|EBA17150.1| hypothetical protein RSK20926_09272 [Roseobacter sp. SK209-2-6]
          Length = 252

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 87/248 (35%), Gaps = 25/248 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + L++ A F++G +  + G GGGL+ VP+L  A              A+ T+      
Sbjct: 7   ETLLLLLAAGFVAGFIDAVAG-GGGLITVPILLIA--------GASPVTALATNKIQGLF 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  + + + R G ++++       +    ++  +L+I+ +   ++     +  + + + 
Sbjct: 58  GAATAALTYARGGYVDLRSQAGSALIAFFASIAGALLITVLPTEWIRLILPVLLIGIALF 117

Query: 141 MLKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
              +     L   R+            + G   G LG G G F     +   G  I KAT
Sbjct: 118 FALKKGLGDLDRARRISPMLFAMTMVPLCGAYDGLLGPGAGSFYMLAFVSLAGYGILKAT 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++      AL             P W  G       L +    I       +L+ 
Sbjct: 178 AHTKLLNLASNAGALCAFALV-----ATPWWFTG-------LAMGVAQIAGAHAGARLAQ 225

Query: 257 MIGKKYLT 264
             G   + 
Sbjct: 226 NKGATLIK 233


>gi|107029073|ref|YP_626168.1| hypothetical protein Bcen_6332 [Burkholderia cenocepacia AU 1054]
 gi|116689768|ref|YP_835391.1| hypothetical protein Bcen2424_1747 [Burkholderia cenocepacia
           HI2424]
 gi|105898237|gb|ABF81195.1| protein of unknown function DUF81 [Burkholderia cenocepacia AU
           1054]
 gi|116647857|gb|ABK08498.1| protein of unknown function DUF81 [Burkholderia cenocepacia HI2424]
          Length = 268

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 98/276 (35%), Gaps = 40/276 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V     G + GL G GGG++ VP L        +  S  M  A   +L  +A ++
Sbjct: 1   MLISLVLGGFVGAVLGLTGAGGGILAVPALV-------VGMSWPMQQATPVALIAVAGSA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +E  R G +  +            T +   +   + +  L   FA+  L++   +L
Sbjct: 54  ALGALEGFRRGLVRYRAALLMAVAGVPLTTLGVRLAHVLPQRLLLTLFALTMLVVAARLL 113

Query: 143 K---------------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
           +                      D       +P        G VTG ++G LGVGGG   
Sbjct: 114 RQALRRQATDTDTSPLCVGRVNPDTGRLVWSWPVGIALASTGAVTGLMTGLLGVGGGFVI 173

Query: 182 NLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             ++  +   S++   ATS  V AL+    +L  + SG               +   L  
Sbjct: 174 VPMLRKFTNVSMHGVVATSLMVIALVGTGGVLATLVSGTRAP-----------LDVTLWF 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              + L        S  +  +++  GF+ ++   + 
Sbjct: 223 TVATALGMAAGRGASRHLAARHVQAGFAAVLVCVAL 258



 Score = 46.2 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G   G + G  G GGGI     L++     + +A          +A  A+    
Sbjct: 2   LISLVLGGFVGAVLGLTGAGGGILAVPALVVGMSWPMQQA--------TPVALIAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +  G V   A L++    + +T L  +L++++ ++ L   F++ M   +
Sbjct: 54  ALG----ALEGFRRGLVRYRAALLMAVAGVPLTTLGVRLAHVLPQRLLLTLFALTMLVVA 109

Query: 276 FV 277
             
Sbjct: 110 AR 111


>gi|254245370|ref|ZP_04938691.1| hypothetical protein BCPG_00067 [Burkholderia cenocepacia PC184]
 gi|124870146|gb|EAY61862.1| hypothetical protein BCPG_00067 [Burkholderia cenocepacia PC184]
          Length = 268

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 98/276 (35%), Gaps = 40/276 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V     G + GL G GGG++ VP L        +  S  M  A   +L  +A ++
Sbjct: 1   MLISLVLGGFVGAVLGLTGAGGGILAVPALV-------VGMSWPMQQATPVALVAVAGSA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +E  R G +  +            T +   +   + +  L   FA+  L++   +L
Sbjct: 54  ALGALEGFRRGLVRYRAALLMAVAGVPLTTLGVRLAHVLPQRLLLTLFALTMLVVAARLL 113

Query: 143 K---------------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
           +                      D       +P        G VTG ++G LGVGGG   
Sbjct: 114 RQALRRQAADTDASPLCVGRVNPDTGRLVWSWPVGIALASTGAVTGLMTGLLGVGGGFVI 173

Query: 182 NLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             ++  +   S++   ATS  V AL+    +L  + SG               +   L  
Sbjct: 174 VPMLRKFTNVSMHGVVATSLMVIALVGTGGVLATLVSGTRAP-----------LDVTLWF 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              + L        S  +  +++  GF+ ++   + 
Sbjct: 223 TVATALGMAAGRGASRHLAARHVQAGFAAVLVCVAL 258



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G   G + G  G GGGI     L++     + +A          +A  A+    
Sbjct: 2   LISLVLGGFVGAVLGLTGAGGGILAVPALVVGMSWPMQQA--------TPVALVAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +  G V   A L++    + +T L  +L++++ ++ L   F++ M   +
Sbjct: 54  ALG----ALEGFRRGLVRYRAALLMAVAGVPLTTLGVRLAHVLPQRLLLTLFALTMLVVA 109

Query: 276 FV 277
             
Sbjct: 110 AR 111


>gi|297570449|ref|YP_003691793.1| protein of unknown function DUF81 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296926364|gb|ADH87174.1| protein of unknown function DUF81 [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 435

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 98/294 (33%), Gaps = 70/294 (23%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I     +G ++G  G GGG ++ P L        +   +   +A+GT L  I   ++M  
Sbjct: 85  IGVGLGAGLITGCIGAGGGFIIAPAL--------MSAGVKGIMAVGTDLFHIFAKAIMGS 136

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLM-------ISHVDKSFLNKAFAIFCLLMGI 139
           + HR+ G I++ +   ++        V  L+          +  +F+   +      +G 
Sbjct: 137 VLHRKLGNISVALAVTFLIGAIGGATVGGLINRTLYELNPVLSDAFITTVYVFMLGFLGF 196

Query: 140 LML-------------------------------------------KRDRLYCERKFPDN 156
             L                                               +    +    
Sbjct: 197 YALADFLQSRKASTLATAEGQAQKDTESMTALSQKIQGVNIPPMIHFDQGVVPGGRKISA 256

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
               I G+V G  +  +GVGGG  T  + ++             GVS+       + +I 
Sbjct: 257 LFLVISGVVVGLAAAIMGVGGGFLTFPIFVYI-----------LGVSSSTTVGTDIFQII 305

Query: 217 SGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
              G  GL  +++ GF+     + +L  S++   + + ++ ++    +   +++
Sbjct: 306 FTAGYAGLGQYAIYGFIFYTLAMGMLLGSLIGIQIGSVVTKVVPGSTIRGFYAV 359



 Score = 43.5 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 43/113 (38%), Gaps = 8/113 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++++  + G  + + GVGGG +  P+             +     +GT +  I  T+ 
Sbjct: 257 LFLVISGVVVGLAAAIMGVGGGFLTFPIFVYIL-------GVSSSTTVGTDIFQIIFTAG 309

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            + +     +G I   +    +    I   + S++   V  S +   +A+  L
Sbjct: 310 YAGLGQYAIYGFIFYTLAMGMLLGSLIGIQIGSVVTKVVPGSTIRGFYAVAVL 362


>gi|160895810|ref|YP_001561392.1| hypothetical protein Daci_0361 [Delftia acidovorans SPH-1]
 gi|160361394|gb|ABX33007.1| protein of unknown function DUF81 [Delftia acidovorans SPH-1]
          Length = 252

 Score = 51.6 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 91/250 (36%), Gaps = 25/250 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +AS L+G +  + G GGGL+++P L   F       +      +GT+       + 
Sbjct: 4   IIVSLASMLAGFVDAIVG-GGGLILLPALFATF------PTAPPATLLGTNKSASVWGTA 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           MS  ++ R   +  + +     V    +   +  ++ +   FL +   +  L + +  L 
Sbjct: 57  MSTWQYGRKVQLPWRAMMPAACVGMAGSFAGAWAVTQISPDFLRRLLPLVLLGVLVYTLA 116

Query: 144 RDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATA 197
           R  +            +  +    G++ GF  G  G G G F   L +   G     A+A
Sbjct: 117 RKDMGRHHTPHYSGRAETLIACAIGLLIGFYDGFFGPGTGSFFVFLFVRLMGYDFLNASA 176

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           ++  ++      AL +                G +     + +   ++L   L T ++  
Sbjct: 177 SAKLLNMATNLAALALFALK------------GHIWWHLAVPMAVANVLGAMLGTHMALR 224

Query: 258 IGKKYLTIGF 267
            G  ++   F
Sbjct: 225 HGTGFVRGIF 234


>gi|256390775|ref|YP_003112339.1| hypothetical protein Caci_1577 [Catenulispora acidiphila DSM 44928]
 gi|256357001|gb|ACU70498.1| protein of unknown function DUF81 [Catenulispora acidiphila DSM
           44928]
          Length = 255

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 73/223 (32%), Gaps = 31/223 (13%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS-LGVIAPTSVMSFMEHRRHGTINMKILK 101
           GGGL+ +P L  A+       ++    A+GT+ L  I+ TS  +   + R   ++ +++ 
Sbjct: 25  GGGLIQLPALLLAY------PTLPAAAALGTNKLASISGTSTAAA-TYLRRTKVDRRVML 77

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER------KFPD 155
               +  +     ++  S +  S          + + + ++ R     +           
Sbjct: 78  PAAALAVVCAGFGAVSASSLPTSVFRPIVMALLVCVAMFVVFRPSFGAQEAGMEASPRRR 137

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF---PALL 212
                  G+  GF  G  G G G F  +              TS    + +A        
Sbjct: 138 LATTLAAGIGIGFYDGIFGPGTGTFLIICF-------AVGIGTSFVAGSAMAKVVNAGTN 190

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
                 +   G   W+LG         +   +I+   +  +L+
Sbjct: 191 FGALLVFATQGHVMWALG-------AGMGACNIIGARIGARLA 226


>gi|227358393|ref|ZP_03842733.1| protein of hypothetical function DUF81 [Proteus mirabilis ATCC
           29906]
 gi|227161429|gb|EEI46473.1| protein of hypothetical function DUF81 [Proteus mirabilis ATCC
           29906]
          Length = 265

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 83/213 (38%), Gaps = 27/213 (12%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G +    GVGGG++++PVL   F +  +        A+ T+  +     + S 
Sbjct: 7   LLIGSAIGLVITTTGVGGGVILLPVLIYLFGMNALA-------AVATANLLSMLMKISSS 59

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------------FLNKAFAIFC 134
             H R G I +K     + ++   T + S  ++ +                L     IF 
Sbjct: 60  YIHFRLGNIPLKPALLILGIMFPATFLASYGVTWLGSQPQYYEQVELGINILMIVAIIFS 119

Query: 135 LLMGILMLKRDRLYCERKFPDNYV-------KYIWGMVTGFLSGALGVGGG-IFTNLLML 186
           + + +  + +                      ++ GM  GF+ GA GVGGG +   +LM 
Sbjct: 120 MFLFLQRIFKKSTSSHPLSSLAPSSSIPLNSLFVPGMSAGFVLGATGVGGGLVVLPVLMR 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           F   +I +A  +S  ++ +++  + +     G+
Sbjct: 180 FAQMNIKEAIGSSIFITTILSGGSAIAYSAGGY 212


>gi|167648329|ref|YP_001685992.1| hypothetical protein Caul_4374 [Caulobacter sp. K31]
 gi|167350759|gb|ABZ73494.1| protein of unknown function DUF81 [Caulobacter sp. K31]
          Length = 264

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 89/253 (35%), Gaps = 25/253 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +  +   + ++G    + G GGGL+ VP L     L G++       A+GT+    A +
Sbjct: 7   LLATMFAVAMVAGAFDAIAG-GGGLLTVPALL----LTGMNPVA----ALGTNKLQGAVS 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ S     R G I+ K          +  +  +L  S +    L     +  +++ +  
Sbjct: 58  AISSTSAFARRGLIDWKTALPVAGAAALAGLCGALCASLLSPRVLAALVPLLLIVIALYF 117

Query: 142 LKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATA 197
                L  E   P        +    + GF  G  G G G F    ++   G    KATA
Sbjct: 118 GLSRGLKGEDVHPRLTLPVFAFCVAPLIGFYDGIFGPGAGAFYMVAIVTLLGYGALKATA 177

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +   +A     +L + I  G             V     L +   + +   + ++L+  
Sbjct: 178 HTKLANAASNLGSLSLFILKGV------------VVWPIGLTMAAGAFIGAQIGSRLAMR 225

Query: 258 IGKKYLTIGFSMI 270
            G + +     ++
Sbjct: 226 FGARLIRPLLVVM 238


>gi|111025680|ref|YP_708100.1| hypothetical protein RHA1_ro08898 [Rhodococcus jostii RHA1]
 gi|110824659|gb|ABG99942.1| possible membrane protein [Rhodococcus jostii RHA1]
          Length = 292

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 81/261 (31%), Gaps = 39/261 (14%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L           S  + +A+  SL ++  TS+++ + H R G +  +       V  
Sbjct: 28  VPALVYVL-------SQPLQIAVTESLVIVGITSIVAAISHARAGRVKWRAGISLGAVGG 80

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL--------------------- 147
           +     + +    D +    AFAI    + I ++ R R                      
Sbjct: 81  VAAWAGTALGRLADPNVALGAFAILLSAVSISLVWRTRPSKLARKRTRNPAVGVANRLPA 140

Query: 148 -----------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
                          +   +        +T       G+  G+ T    +  G  I    
Sbjct: 141 LAVVPASTPAETTATQLEASPGPRTERYLTAGKVLTAGIAIGVLTGFFGVGGGFVIVPVL 200

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             + G    IA    L+ I     +      S   ++   VL +   +I+   +   L+ 
Sbjct: 201 VIALGYPMPIAVGTSLLVITLNSAVALAARSSHDALDWSVVLPVTASAIVGALVGKWLAL 260

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
              +K LT  F++++   S  
Sbjct: 261 RTSEKTLTRAFAVLLVAVSVY 281



 Score = 49.3 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 37/89 (41%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            ++ I     M +A+GTSL VI   S ++      H  ++  ++        +  +V   
Sbjct: 198 PVLVIALGYPMPIAVGTSLLVITLNSAVALAARSSHDALDWSVVLPVTASAIVGALVGKW 257

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           +     +  L +AFA+  + + + +  R 
Sbjct: 258 LALRTSEKTLTRAFAVLLVAVSVYVGLRS 286


>gi|289583415|ref|YP_003481825.1| protein of unknown function DUF81 [Natrialba magadii ATCC 43099]
 gi|289532913|gb|ADD07263.1| protein of unknown function DUF81 [Natrialba magadii ATCC 43099]
          Length = 346

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 7/116 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  I  A    G +SGL GVGGG + +P +              +  A+GTSL     + 
Sbjct: 179 VWTITGAGGSVGLVSGLIGVGGGFIRMPAIYYLI-------GTPLTAAVGTSLFAGLFSG 231

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                 +   G++++ ++   +    +   + S   + V++  +   F I  +L  
Sbjct: 232 AFGTFTYGMSGSVDLTVVSLLLVGSALGARIGSAATTMVEEDDVIIYFGIMMVLAS 287



 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 58/294 (19%), Positives = 97/294 (32%), Gaps = 64/294 (21%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +   F+ G L G FG+GG  ++ P L                VA+G+ L     TSV++
Sbjct: 14  FVSFGFMVGVLFGFFGMGGSFLITPTLLIL--------DYPASVAIGSGLAFYFGTSVIA 65

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMI---SHVDKSFLNKAFAIFCLLMGILML 142
            ++H   G ++ K+      VL I   + S ++     +  + L    A   LL GI  L
Sbjct: 66  VLKHYDVGQVDYKLGAILFVVLSIGIELGSRLVFGLEALGIANLVTGVAYVVLLAGIGAL 125

Query: 143 KRDRLY-----------------CERKFP-----------------------DNYVKYIW 162
              R                    + + P                         +     
Sbjct: 126 FLRRAANLDDEDDAAEDSDEDSVSDEEIPAIGQKIQSYTIPPMINLTSGGRASVWTITGA 185

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
           G   G +SG +GVGGG      + +  G  +  A  TS                 SG   
Sbjct: 186 GGSVGLVSGLIGVGGGFIRMPAIYYLIGTPLTAAVGTSLFAGLFSGAFGTFTYGMSGS-- 243

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                     V++  V ++L  S L   + +  + M+ +  + I F ++M   S
Sbjct: 244 ----------VDLTVVSLLLVGSALGARIGSAATTMVEEDDVIIYFGIMMVLAS 287


>gi|332702756|ref|ZP_08422844.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332552905|gb|EGJ49949.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 381

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 52/119 (43%), Gaps = 8/119 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+  F+  +++   GVGGG ++VP L+           + M++  GTS   +    + S 
Sbjct: 259 ILGGFVIASIAAFLGVGGGFLLVPFLTSV-------AGLPMYLVAGTSALAVLIGMITSI 311

Query: 87  MEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + +   G  ++  ++   I  + I +V+      ++   +L   F +    +G+  + R
Sbjct: 312 ITYITQGALVDWGLVGIEIIGIVIGSVIGPKTSKYIPDRWLKILFIVLAFYVGLRYIGR 370



 Score = 43.9 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 12/125 (9%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLV 213
           +  +  + G V   ++  LGVGGG      +    G  +Y    TSA    +    +++ 
Sbjct: 254 NPLIPILGGFVIASIAAFLGVGGGFLLVPFLTSVAGLPMYLVAGTSALAVLIGMITSIIT 313

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            I  G             V+ G V I +   ++ + +  K S  I  ++L I F ++ F 
Sbjct: 314 YITQGA-----------LVDWGLVGIEIIGIVIGSVIGPKTSKYIPDRWLKILFIVLAFY 362

Query: 274 TSFVF 278
               +
Sbjct: 363 VGLRY 367


>gi|226359441|ref|YP_002777218.1| hypothetical protein ROP_00260 [Rhodococcus opacus B4]
 gi|226237925|dbj|BAH48273.1| hypothetical membrane protein [Rhodococcus opacus B4]
          Length = 252

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 64/191 (33%), Gaps = 7/191 (3%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
                G L G+ G+GG    +PVL   F  + +   I         +    P  +MS   
Sbjct: 3   TGASIGVLGGMIGLGGAEFRLPVLIGLFGFVALQAVIVNKAMSLIVVLTALPARLMSVP- 61

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM----LKR 144
                  +  ++ + +    +   V +   + +  + L K  A+  +++ I +       
Sbjct: 62  -YADLVPHWSVVVNLLCGSLVGAWVGATWATKMRSATLYKVLAVLLVVIAIALGASHFGE 120

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVS 203
                           I G   G ++  +GV GG +    ++L YG  I  A + S  VS
Sbjct: 121 LGTLDLGPLSRTIAGLIAGFGIGVVAALMGVAGGELLIPTIVLLYGVDIKIAGSLSLAVS 180

Query: 204 ALIAFPALLVR 214
                 A    
Sbjct: 181 LPTMLVAFARY 191


>gi|13541986|ref|NP_111674.1| permease [Thermoplasma volcanium GSS1]
 gi|14325418|dbj|BAB60322.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 327

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 96/294 (32%), Gaps = 52/294 (17%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +V     I++ +F++G +  L G+GGG V+VPVL+  +        + +  A G SL  
Sbjct: 6   EIVIRFLSILIGAFIAGLIGSLTGLGGGTVLVPVLTLFY-------GVPIIYATGASLIS 58

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK----AFAIF 133
              TS  S   + +    N+++            +V SL   ++    L+      F + 
Sbjct: 59  TIATSAGSASAYAKEKIANIRLGVGLEVATTTGAIVGSLTAVYIYDHHLSWLVYVIFGMV 118

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKYIWG----------------------------MV 165
            L   I  ++R +    +    ++   I+                               
Sbjct: 119 LLGSLIPTIQRGKYEIPKILKPDWTTRIFQLSGSYYDAKLHKNVEYSGVRWWLGEIIMFF 178

Query: 166 TGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            G +SG LG+G G    L M +     +   T +S  +  + A     +           
Sbjct: 179 AGLISGLLGIGSGALKVLGMDWAINLPMKVTTTSSNFMIGITAATGSSIY---------- 228

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             W  G++            ++   L  K+   I  + +   F  I+       
Sbjct: 229 --WYAGYIQPFIAAATAIGVLIGAFLGAKILVRITNRSIRWIFFAILMFLGIQM 280



 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +  F +G +SGL G+G G + V  +  A        ++ M V   +S  +I  T+ 
Sbjct: 170 WLGEIIMFFAGLISGLLGIGSGALKVLGMDWAI-------NLPMKVTTTSSNFMIGITAA 222

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +   G I   I       + I   + + ++  +    +   F    + +GI M+ 
Sbjct: 223 TGSSIYWYAGYIQPFIAAATAIGVLIGAFLGAKILVRITNRSIRWIFFAILMFLGIQMVL 282

Query: 144 R 144
           +
Sbjct: 283 K 283


>gi|328882319|emb|CCA55558.1| putative membrane protein YfcA [Streptomyces venezuelae ATCC 10712]
          Length = 261

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 61/195 (31%), Gaps = 22/195 (11%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+  V    +  + + + R   + +             ++  +   + +    L    
Sbjct: 50  LGTNKAVAIVGTTGAAVTYVRKAPVQVWTAVRIGLAALTGSMGGAFFAAGISSDVLRPVI 109

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKY---------IWGMVTGFLSGALGVGGGIFT 181
            +  L +   ++ R     + +  +              + G   GF  G  G G G F 
Sbjct: 110 MVVLLAVAAFVVLRPSFGAKAEGEERAPLTRARIVTAIVVVGGGIGFYDGLFGPGTGTFL 169

Query: 182 NLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
            L +       +  A+AT+  V+      AL +  Y G             V      ++
Sbjct: 170 VLALTAVLHLDLVTASATAKIVNVCTNAGALAMFAYQGS------------VYWQLAAVM 217

Query: 241 LPISILITPLATKLS 255
              +++   +  +++
Sbjct: 218 AVFNLIGGTVGARMA 232



 Score = 35.4 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 33/97 (34%), Gaps = 7/97 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +  I+V     G   GLFG G G  +V  L+    L  +        A  T+  V   T
Sbjct: 143 IVTAIVVVGGGIGFYDGLFGPGTGTFLVLALTAVLHLDLV-------TASATAKIVNVCT 195

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI 118
           +  +       G++  ++         I   V + M 
Sbjct: 196 NAGALAMFAYQGSVYWQLAAVMAVFNLIGGTVGARMA 232


>gi|294665806|ref|ZP_06731076.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292604413|gb|EFF47794.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 361

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 69/205 (33%), Gaps = 16/205 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++  +F++G +    G GGGL+ +P L                + +GT+       +
Sbjct: 100 LPWLLCIAFVAGLVDAAVG-GGGLIQLPGLFATLPQQ------APSLILGTNKFSAMFGT 152

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   + R      + +          + + +  +S + +  +     +  + M I  L
Sbjct: 153 AASAWRYARTVRFPWRPVLYATAAAFTFSFLGATAVSLMPRQAVRPLILVLLIAMLIYTL 212

Query: 143 KRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVGGGI----FTNLLMLFYGASIY 193
            +       +      +        G   GF  G  G G G        L + F+G    
Sbjct: 213 IKKDFGALHRPRQIGRRELATALAMGAAIGFYDGFFGPGTGSFLIFLIFLFIRFFGLDFL 272

Query: 194 KATATSAGVSALIAFPALLVRIYSG 218
           +A+A +  V+      AL   + SG
Sbjct: 273 RASAAAKVVNLATNLAALSFFLPSG 297


>gi|164687573|ref|ZP_02211601.1| hypothetical protein CLOBAR_01214 [Clostridium bartlettii DSM
           16795]
 gi|164603347|gb|EDQ96812.1| hypothetical protein CLOBAR_01214 [Clostridium bartlettii DSM
           16795]
          Length = 121

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 46/107 (42%), Gaps = 7/107 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            +++P L           SI   +A  T+L    P ++++   H +   ++  ++   + 
Sbjct: 22  TILIPALILF-------ASIDPKIAQSTNLLSSIPMTIVALAIHIKKKNVDFDLVLPIVL 74

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
              +     S +  ++    L K F +F L++GI  +++  ++  +K
Sbjct: 75  FGIVGAFFGSTLAEYLPSELLRKFFGVFLLIIGIFEIQKGYMHKGKK 121


>gi|206889302|ref|YP_002249656.1| hypothetical membrane protein, conserved, DUF81 family
           [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741240|gb|ACI20297.1| hypothetical membrane protein, conserved, DUF81 family
           [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 247

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 102/262 (38%), Gaps = 24/262 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + Y+   ++  F +  L+ + GVG   +++PV             I +  AM T+L + +
Sbjct: 1   MTYLLASLITFFFTTVLT-IAGVGAAFILIPVFVAL--------GIPLLTAMSTALLLNS 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
               ++   + R G I  +     + +  + + + ++   H+ ++FL   F  F L  G 
Sbjct: 52  FAMAVASFYNARAGLIVYRTALPILIIASLLSPLGAITAEHLSRTFLLWLFIGFLLFAGS 111

Query: 140 LML--KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           +ML  K  +                G   GF+ G LGVGGG      +++ G    KA+A
Sbjct: 112 MMLWYKPKKREISDSKKLISYGAGVGGFAGFIGGLLGVGGGNLIVPALVWLGFDPKKASA 171

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS-Y 256
           T++ +    +F   L  I            SLG ++   +++    S+    L   L   
Sbjct: 172 TTSFIVIFSSFAGFLGHI------------SLGNIDHNLLIVCAIASVAGAVLGNYLMRK 219

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            +    +     ++++  +   
Sbjct: 220 KLSAPQVKKVIGIVLYIIAAKM 241


>gi|87198433|ref|YP_495690.1| hypothetical protein Saro_0408 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87134114|gb|ABD24856.1| protein of unknown function DUF81 [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 255

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 86/225 (38%), Gaps = 13/225 (5%)

Query: 8   FSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
              +  +    ++ +I +   A  + G L   FGV    +MV VL       GI  ++  
Sbjct: 1   MDFLAGIDFTALLPFIAVGFAAQMVDGALGMAFGVISNTLMVGVL-------GIPPALAS 53

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
                    V   T+  S + H  HG ++ K+    +       ++ + ++S +D S + 
Sbjct: 54  QRVH----IVECFTTATSGISHLLHGNVDKKLFFRLLIPGMAGGILGAYVLSSLDASLVK 109

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
               ++   +GI +L R  LY   K  +       G++ GFL  A G G G      +L 
Sbjct: 110 PWVLLYLSAIGIYLLVRGILYP-PKIKEAGWVAPLGLLGGFLDAAGGGGWGPVVTSNLLI 168

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
            GA   K   T   V   +        I+   G+  +   +LGF+
Sbjct: 169 QGADPRKVVGTVNTVEFFLTLTVSATFIWH-LGVADVAGATLGFL 212


>gi|330939617|gb|EGH42924.1| hypothetical protein PSYPI_11163 [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 243

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 89/229 (38%), Gaps = 16/229 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++     I    I   +T
Sbjct: 24  AIPALGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALMLIIPSFILAWLT 83

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSG 171
           SL+   VD   +  AF  F +++ +  + +     ++           ++ G+ +G   G
Sbjct: 84  SLLAVRVDPQGMRLAFVGFLVVLTVFNVAQMYWRSKQAAGGLRHEKWLWLLGVGSGVTGG 143

Query: 172 ALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
             GVGGG+    ++   +GA+   A   +  ++A      L+                  
Sbjct: 144 LFGVGGGVVATPILTSVFGATQVVAQGLALSLAAPSTGITLVTYALHD------------ 191

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            VN    + +    +       KL++ + ++ L + F + +   + + A
Sbjct: 192 HVNWAMGIPLAIGGLASISWGVKLAHSLPERTLRLMFCVFLVLCAVILA 240


>gi|296272767|ref|YP_003655398.1| hypothetical protein Arnit_1232 [Arcobacter nitrofigilis DSM 7299]
 gi|296096941|gb|ADG92891.1| protein of unknown function DUF81 [Arcobacter nitrofigilis DSM
           7299]
          Length = 255

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 85/208 (40%), Gaps = 13/208 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMHVAMG 72
           L  D  + ++   ++A FL+G +  + G GGG+V VPVL  +    + +  S  M   +G
Sbjct: 3   LFADITLYWVIGFVIAGFLAGYIDSIAG-GGGMVQVPVLLLSGLSPLHVLASNKMAGLVG 61

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
             +  I         ++     I+ K++   I    + + + S ++  V    +  A  +
Sbjct: 62  VLMATI---------KYALSKKISWKVVSIAIIPCLLASYIGSRLVMFVSDEIITWAIIL 112

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV-TGFLSGALGVGGGIFTNLLM-LFYGA 190
              +  I + K+ +   E K   N    I      GF  G LG G G +  + M  F   
Sbjct: 113 AIPVAMIFLFKKSKKIVEEKTEVNNKNIILATAPIGFYDGLLGPGTGTYMTISMKKFLHL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSG 218
               +TA++  ++      + +  +++G
Sbjct: 173 DYLVSTASTKPLNFATNVGSAIAFVFAG 200


>gi|291521836|emb|CBK80129.1| Predicted permeases [Coprococcus catus GD/7]
          Length = 239

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 63/154 (40%), Gaps = 12/154 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +IVA+  +  + G+ G    LV   +LS +F  + I             + +I    
Sbjct: 1   MVWLIVATLAASFIKGVCGFANTLVFTTILSFSFNNIQITP-----------MDLIIGYP 49

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               +  +    IN +I      ++    +    M+ +VD   +   F  F + MGI ML
Sbjct: 50  ANVIIAWKERRQINWRISLPVAALIIFGNIPGIFMLKNVDTRTIKVIFGFFIIAMGIEML 109

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
            R+R   ++K     +  + G+++G   G  GVG
Sbjct: 110 MRERAGKKQKQ-SKIILGLIGVLSGLCCGLYGVG 142


>gi|259417495|ref|ZP_05741414.1| putative membrane protein [Silicibacter sp. TrichCH4B]
 gi|259346401|gb|EEW58215.1| putative membrane protein [Silicibacter sp. TrichCH4B]
          Length = 252

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 90/265 (33%), Gaps = 25/265 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +   + + L++ A F +G +  + G GGGL+ VPVL  A              A+ T+  
Sbjct: 3   EVTFEVLLLLMAAGFAAGFIDAVAG-GGGLITVPVLLIA--------GANPVTALATNKI 53

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                +  + + + R G ++++       +    ++  +L++S +    +  A  +  + 
Sbjct: 54  QGLFGAATAAITYARGGHVDLRTQWKPAVIAFFASIGGALLVSVLPVDLIRYALPVLLIG 113

Query: 137 MGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASI 192
           + +    +  L      R+            +     G LG G G F     +   G  +
Sbjct: 114 IAVFFATKKGLNDVDRARRLSPAVFAATMVPLCAAYDGLLGPGAGSFYMLAFVGLAGYGV 173

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            KATA +  ++      AL             P W  G       L +    I    +  
Sbjct: 174 LKATAHTKLLNFASNAGALAAFAVV-----ATPWWFTG-------LAMGLAQIAGARVGA 221

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
            L+   G K +     +   T +  
Sbjct: 222 GLAQKQGAKVIKPLLVLTTVTLALK 246


>gi|224542278|ref|ZP_03682817.1| hypothetical protein CATMIT_01453 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524820|gb|EEF93925.1| hypothetical protein CATMIT_01453 [Catenibacterium mitsuokai DSM
           15897]
          Length = 248

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 73/194 (37%), Gaps = 15/194 (7%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           FL+G +  + G GGGL+ +P    A         I +H A+ T+    +  +V+S     
Sbjct: 12  FLAGFVDSIAG-GGGLISLPAYMFA--------GIPVHAAIATNKLSSSTGTVVSTARLI 62

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           ++  ++   +   +    I +V  + +   +    L     +   ++ I +LK   +  E
Sbjct: 63  KNKKVDWGFVPGTVIGALIGSVAGANLTLIMSDHILKMVLVVLLPVVAICVLKDKNMDVE 122

Query: 151 -----RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSA 204
                 K     +      V G   G  G G G F  L+   +    I KAT     V+ 
Sbjct: 123 VPVGMTKTKQYLIAIACSFVIGCYDGFYGPGTGTFLLLVFTKFAKMPIDKATGNVKVVNL 182

Query: 205 LIAFPALLVRIYSG 218
                AL+  I +G
Sbjct: 183 SSNISALVTFILAG 196


>gi|116620725|ref|YP_822881.1| hypothetical protein Acid_1605 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223887|gb|ABJ82596.1| protein of unknown function DUF81 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 273

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 7/110 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G +SGL G+G G + V         M     I   V+  TS  +I  T+  S   +   
Sbjct: 163 AGAISGLLGIGSGSLKV-------IAMDRAMRIPFKVSTTTSNFMIGVTAAASAGVYLNR 215

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           G I+  ++   +  +   ++  + ++S      L   FA     M I M+
Sbjct: 216 GYIDPLLVMPVMIGVLAGSLAGARVLSGASTKVLRLVFAAVVGFMAIQMI 265



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 82/259 (31%), Gaps = 45/259 (17%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +V+ P L+  F        I +  A+G SL     TS  +   + R G  N++I      
Sbjct: 25  VVITPALTLLF-------GIDLRYAIGASLVSAIATSSGAASAYVREGYSNVRIGMFLEV 77

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM---------------------LKR 144
                 +  + + + V  S L     +  L    L                      +  
Sbjct: 78  ATVFGALAGATLATWVSTSVLGVILGLVLLQSAWLSGQHHEDRVELTSSDPLAVKLHMDG 137

Query: 145 DRLYCERKFPDNYVKYIWGM----VTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATS 199
           +    +   P +  +   G       G +SG LG+G G    + M          +T TS
Sbjct: 138 EYPTAQGMLPYHVQRVKTGFALMLGAGAISGLLGIGSGSLKVIAMDRAMRIPFKVSTTTS 197

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +  + A  +  V +  G+    L         +  ++ +L  S+       ++     
Sbjct: 198 NFMIGVTAAASAGVYLNRGYIDPLLV--------MPVMIGVLAGSLA----GARVLSGAS 245

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            K L + F+ ++   +   
Sbjct: 246 TKVLRLVFAAVVGFMAIQM 264


>gi|145356024|ref|XP_001422242.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582482|gb|ABP00559.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 296

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 32/134 (23%), Gaps = 12/134 (8%)

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +    L               G   G +S   G+GG +     +   G        T+  
Sbjct: 1   MASPHLARASSLVRGAFTVASGGFAGSVSAVTGLGGAVVFIPALSKLGYEARHIVGTAVV 60

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
                          +G               + A + +  +    TP+   L+  +  K
Sbjct: 61  AVTGATAAGSFAYAQNGVSD------------VPAAVTVGCVGAACTPVGQLLAKRLSGK 108

Query: 262 YLTIGFSMIMFTTS 275
            L       +   S
Sbjct: 109 TLRKMLGGALILCS 122



 Score = 40.1 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 43/110 (39%), Gaps = 8/110 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + +   +G++S + G+GG +V +P L      +G +        +GT++  +   +    
Sbjct: 19  VASGGFAGSVSAVTGLGGAVVFIPAL----SKLGYEARHI----VGTAVVAVTGATAAGS 70

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             + ++G  ++        V    T V  L+   +    L K      +L
Sbjct: 71  FAYAQNGVSDVPAAVTVGCVGAACTPVGQLLAKRLSGKTLRKMLGGALIL 120


>gi|111027069|ref|YP_709047.1| permease [Rhodococcus jostii RHA1]
 gi|110825608|gb|ABH00889.1| possible permease [Rhodococcus jostii RHA1]
          Length = 257

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I A    G L+GLFGVGGG +++P L     L        M VA+GTSL +I   S    
Sbjct: 142 IPAGIAVGFLTGLFGVGGGFLIIPALVLMLGLQ-------MSVAVGTSLVIIVANSAAGL 194

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + H    +I+  I   +     + +++     + VD   L + FA    ++   +L  
Sbjct: 195 VSHLSGASIDWAITAAFAGTAIVGSLIAGHFGTTVDTDRLQRWFAYLVFVVAAYVLID 252



 Score = 41.6 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 76/239 (31%), Gaps = 29/239 (12%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     L        +  A+  SL VI   S++  +   R   +N ++   +     
Sbjct: 29  VPALVFGLGLD-------LEQAIPISLLVIGVASLVGAVPKIRQHQVNWRMAGVFAACGI 81

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD---------NYVK 159
             T   S +   + +S +   FA   ++ GI ML                          
Sbjct: 82  PATFAGSAIGRLLPQSVVMIGFAAVMVVAGIRMLMDRGDTGTACDVGDSGIDWRRCAPRS 141

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
              G+  GFL+G  GVGGG      ++   G  +  A  TS  +    +   L+  +   
Sbjct: 142 IPAGIAVGFLTGLFGVGGGFLIIPALVLMLGLQMSVAVGTSLVIIVANSAAGLVSHLSGA 201

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                        ++          +I+ + +A      +    L   F+ ++F  +  
Sbjct: 202 S------------IDWAITAAFAGTAIVGSLIAGHFGTTVDTDRLQRWFAYLVFVVAAY 248


>gi|152999674|ref|YP_001365355.1| hypothetical protein Shew185_1140 [Shewanella baltica OS185]
 gi|151364292|gb|ABS07292.1| protein of unknown function DUF81 [Shewanella baltica OS185]
          Length = 305

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 94/261 (36%), Gaps = 21/261 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +         +   G GGG++ +PV S   F       +  M    G + G I   S  
Sbjct: 55  FVFLGITGAIFANSTGAGGGVIFIPVFSSLNFSESQSVATSFMIQCFGMTAGAI---SWS 111

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV---DKSFLNKAFAIFCLLMGILM 141
            + + R             + +    +V+       +     S L+ +F+IF +++GI +
Sbjct: 112 LYYKKRHREDAAWSGFVKAVLLAAFFSVLGFWSSQLLQLNSPSSLHTSFSIFSIVLGIAI 171

Query: 142 LKRDR---LYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           +   +          P D     + G   G ++  L VG G    + ++  G     A A
Sbjct: 172 VISSKSSTPITRAIMPVDFLWLALIGYFGGIITAWLSVGVGELVVIYLILRGLCAKMAVA 231

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T   VSA+  + A  + I+S                   VL   P +++   LA KL+  
Sbjct: 232 TGVIVSAITVWSASPIHIFSTNSHALFEL----------VLFAGPGAVIGGLLARKLALY 281

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +  K L + FS+ +  T  V 
Sbjct: 282 LPVKVLKLFFSIWIILTGSVM 302



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 43/122 (35%), Gaps = 6/122 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              + +  +  G ++    VG G ++V  +    + +       M VA G  +  I   S
Sbjct: 190 FLWLALIGYFGGIITAWLSVGVGELVV--IYLILRGL----CAKMAVATGVIVSAITVWS 243

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                    +     +++        I  ++   +  ++    L   F+I+ +L G +ML
Sbjct: 244 ASPIHIFSTNSHALFELVLFAGPGAVIGGLLARKLALYLPVKVLKLFFSIWIILTGSVML 303

Query: 143 KR 144
             
Sbjct: 304 AS 305


>gi|134280566|ref|ZP_01767277.1| putative membrane protein [Burkholderia pseudomallei 305]
 gi|134248573|gb|EBA48656.1| putative membrane protein [Burkholderia pseudomallei 305]
          Length = 242

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 81/253 (32%), Gaps = 33/253 (13%)

Query: 41  GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKIL 100
           GVGGG +M P+L   F       ++    A+GT L   A T       H   GT+  +I 
Sbjct: 3   GVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAALTKATGTFVHGLKGTVEWRIT 55

Query: 101 KDWIFVLPITTVVTSLMI------SHVDKSFLNKAFAIFCLL----------MGILMLKR 144
                       +T   +      S      +        LL          +     KR
Sbjct: 56  GRLAAGSVPAAAITLWFLHAHGMHSQETSRMIQFVLGAALLLTSLSLLLRPQLAAFAAKR 115

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            R              + G V G L     VG G     ++L     +Y A +T+  V +
Sbjct: 116 TRALPPNPTRTLAATVLTGAVLGVLVSLTSVGAGAIGVTVLLL----LYPALSTTRIVGS 171

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
            IA    L        + G+  W LG V+   ++ +L  S+    + + LS    +  L 
Sbjct: 172 DIAHAVPLTL------VAGVGHWMLGSVDWAMLVSLLIGSVPGIVVGSHLSARAPEGLLR 225

Query: 265 IGFSMIMFTTSFV 277
              +  +      
Sbjct: 226 RVLAATLVAVGAK 238



 Score = 42.4 bits (99), Expect = 0.080,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 48/118 (40%), Gaps = 6/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  L  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 131 VLTGAVLGVLVSLTSVGAGAIGVTVLLLLY------PALSTTRIVGSDIAHAVPLTLVAG 184

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + H   G+++  +L   +       VV S + +   +  L +  A   + +G  ++  
Sbjct: 185 VGHWMLGSVDWAMLVSLLIGSVPGIVVGSHLSARAPEGLLRRVLAATLVAVGAKLVLS 242


>gi|254698624|ref|ZP_05160452.1| hypothetical protein Babob28_13236 [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 316

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 88/273 (32%), Gaps = 56/273 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G LSGLFGVGGG ++ P+L           +I   +A+ T    +  +S
Sbjct: 24  MLVLLGMGAAVGFLSGLFGVGGGFLITPLLIFY--------NIPPAIAVATGANQVIASS 75

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
           V   + H +  T+++K+    +    + +++   + S +         ++  +  F   +
Sbjct: 76  VSGALAHFKRRTLDIKLGLFLVAGGILGSLIGIFVFSWLRDLGQLDLIVSILYVFFLGTI 135

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R      +         G   
Sbjct: 136 GGLMLVESVQALRRAKKGQGGAVRRSGQHTWIHRLPFKMRFRASTIYVSVIPVLGIGFFI 195

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G LS  +GVGGG      +++           TS      +     +++  +        
Sbjct: 196 GLLSSVMGVGGGFIMVPALIYLLHVPTNVVVGTSLFQITFVTAFTTVMQATTNQS----- 250

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 ++I    ++    ++      +    +
Sbjct: 251 ------IDIVLAFLLTVGGVIGAQYGARAGRKL 277


>gi|154148825|ref|YP_001406810.1| hypothetical protein CHAB381_1259 [Campylobacter hominis ATCC
           BAA-381]
 gi|153804834|gb|ABS51841.1| putative domain of unknown function [Campylobacter hominis ATCC
           BAA-381]
          Length = 242

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 79/200 (39%), Gaps = 14/200 (7%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           + +A+G S+  +  +++     + ++G + +       F       ++  +++ V    L
Sbjct: 36  IKIAIGISILQMLFSAIFGSYINYKNGKLVINNGIFVGFGGLFGAGLSGFIVAAVPSKCL 95

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
                +  L + I+      +  E K P N + +I G   G ++ ++G+GG +F   +++
Sbjct: 96  EIGL-LITLAIAIVKFFMTNVSKESKNPSNILLFIIGAAIGAIAISMGIGGALFLTPILV 154

Query: 187 -FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
            F G  I KA +         +F   +   +             G+V+    +++   S+
Sbjct: 155 GFLGVDIKKAVSMGLFFVIFSSFSGFISLAWH------------GYVDYKDGILLGLGSL 202

Query: 246 LITPLATKLSYMIGKKYLTI 265
                 TK S+ I K+    
Sbjct: 203 AGVYFGTKTSHRISKQSQKY 222


>gi|120404246|ref|YP_954075.1| hypothetical protein Mvan_3271 [Mycobacterium vanbaalenii PYR-1]
 gi|119957064|gb|ABM14069.1| protein of unknown function DUF81 [Mycobacterium vanbaalenii PYR-1]
          Length = 304

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 82/258 (31%), Gaps = 22/258 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +    +  + G  G+  G+     L     +     S  +H+A          T+
Sbjct: 4   LLIFTLVGVGAQLVDGALGMAFGVTAT-TLLVLSGVGAAQASAAVHLAE-------VGTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H +   I+  ++        +   + + ++S +         A   + +G  +L
Sbjct: 56  FASGLSHWKFKNIDWALVAKLGAPGAVGAFLGATVLSSLSTEHAAPLMAAILVAIGAYVL 115

Query: 143 KRDRLYCERKFPDNYVKYI-----WGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKAT 196
            R  L             +      G+  GF+  + G G G  T   +L  G  +     
Sbjct: 116 LRFSLRTPLTLVRGSSHSVKFLAPLGLFGGFIDASGGGGWGPVTTSTLLSQGKTAPRTVI 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            + +    L+A  A L  +  G     L        N   V+ ++   ++  P A  L  
Sbjct: 176 GSVSASEFLVAASASLGFLV-GLRQEFLE-------NWPVVVGLMVGGVIAAPFAAWLVT 227

Query: 257 MIGKKYLTIGFSMIMFTT 274
            +    L      ++  T
Sbjct: 228 KVSPALLGSAVGGVIVLT 245


>gi|197287364|ref|YP_002153236.1| hypothetical protein PMI3560 [Proteus mirabilis HI4320]
 gi|194684851|emb|CAR46978.1| putative membrane protein [Proteus mirabilis HI4320]
          Length = 265

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 83/213 (38%), Gaps = 27/213 (12%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G +    GVGGG++++PVL   F +  +        A+ T+  +     + S 
Sbjct: 7   LLIGSAIGLVITTTGVGGGVILLPVLIYLFGMNALA-------AVATANLLSMLMKISSS 59

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------------FLNKAFAIFC 134
             H R G I +K     + ++   T + S  ++ +                L     IF 
Sbjct: 60  YIHFRLGNIPLKPALLILGIMFPATFLASYGVTWLGSQPQYYEQVELGINILMIVAIIFS 119

Query: 135 LLMGILMLKRDRLYCERKFPDNYV-------KYIWGMVTGFLSGALGVGGG-IFTNLLML 186
           + + +  + +                      ++ GM  GF+ GA GVGGG +   +LM 
Sbjct: 120 MFLFLQRIFKKSTSSHPLSSLAPSSSIPLNSLFVPGMSAGFVLGATGVGGGLVVLPVLMR 179

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           F   +I +A  +S  ++ +++  + +     G+
Sbjct: 180 FAQMNIKEAIGSSIFITTILSGGSAIAYSAGGY 212


>gi|222086011|ref|YP_002544543.1| hypothetical protein Arad_2418 [Agrobacterium radiobacter K84]
 gi|221723459|gb|ACM26615.1| conserved hypothetical membrane protein [Agrobacterium radiobacter
           K84]
          Length = 266

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 89/273 (32%), Gaps = 40/273 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L   + F  G L G+ GVGGG +M P+L   F        +    A+GT L   A T   
Sbjct: 10  LYSFSGFFVGMLVGITGVGGGSLMTPLLVLLF-------GVHPATAVGTDLLYAAITKTA 62

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC---------- 134
               H  HG +N K++           +    +++ V++     A AI            
Sbjct: 63  GTAVHGMHGRVNWKVVGLLASGSVPAALAMLWLMAGVNRESPEVAHAITLSLGCLLLLTA 122

Query: 135 --------LLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
                   +L  +   + +R     +        +  ++   L     VG G     ++L
Sbjct: 123 LMLLCRGQVLNAMRKWRGERGMLAPRTIALLTLVLGLVLG-TLVTMTSVGAGALGVTVLL 181

Query: 187 FY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
                  + +   +    +  +     +              W +G +N   +  +L  S
Sbjct: 182 VLYPQLDVREIVGSDIVHAVPLTLIGGMGY------------WFIGEINWTMLFALLLGS 229

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           I      + L+  + ++ + I  ++ +   +  
Sbjct: 230 IPGIVAGSLLAPRLHERLIRIVLAVTLMVVALK 262


>gi|221212837|ref|ZP_03585813.1| putative membrane protein [Burkholderia multivorans CGD1]
 gi|221167050|gb|EED99520.1| putative membrane protein [Burkholderia multivorans CGD1]
          Length = 268

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 96/272 (35%), Gaps = 40/272 (14%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G + GL G GGG++ VP L        +     M  A   +L  +A ++ +  
Sbjct: 5   LLLGGCVGAVLGLTGAGGGILAVPALV-------VGMGWPMQQATPVALVAVAGSAALGA 57

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK--- 143
           +E  R G +  +            T + + +   + +  L   FA+  L++   +L+   
Sbjct: 58  LEGFRRGLVRYRAALLMAVAGVPLTTLGARLAHVLPQRVLLALFALTMLVVATRLLRQAL 117

Query: 144 ------------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
                              D       +P        G VTG ++G LGVGGG     ++
Sbjct: 118 RQPPADAQLSPLCVGRVNPDTGRLVWSWPVGLALASTGAVTGLMTGLLGVGGGFVIVPML 177

Query: 186 LFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
             +   S++   ATS  V AL+    +   + +G               +  +L     +
Sbjct: 178 RKFTNVSMHGIVATSLMVIALVGTGGVFATLAAGTHAA-----------LDVMLWFTVAT 226

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            L        S  +  +++  GF+ ++   + 
Sbjct: 227 ALGMAAGRGASRHLSARHVQAGFAAVLVCVAL 258



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            V  + G   G + G  G GGGI     L++  G  + +A          +A  A+    
Sbjct: 2   LVSLLLGGCVGAVLGLTGAGGGILAVPALVVGMGWPMQQA--------TPVALVAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +  G V   A L++    + +T L  +L++++ ++ L   F++ M   +
Sbjct: 54  ALG----ALEGFRRGLVRYRAALLMAVAGVPLTTLGARLAHVLPQRVLLALFALTMLVVA 109

Query: 276 FV 277
             
Sbjct: 110 TR 111


>gi|21674547|ref|NP_662612.1| hypothetical protein CT1731 [Chlorobium tepidum TLS]
 gi|21647742|gb|AAM72954.1| conserved hypothetical protein [Chlorobium tepidum TLS]
          Length = 263

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 87/271 (32%), Gaps = 37/271 (13%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI+   F    +  + G GGG   V  L            + MH A  TS  ++  ++++
Sbjct: 5   LIVAIIFALTVVMIMSGRGGGNFYVATLVLL--------GVQMHTASTTSQFILLASALV 56

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +   +   ++  +   +  +      V   M      + L    ++   + G+ ML  
Sbjct: 57  GAIVFGKARVMSWPLAIFFGSLNATMAFVGGFMAHSFTGTLLKFILSLLLFVAGVAMLFP 116

Query: 145 DRLYCERKFPDN----------------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF- 187
           ++   +                      +V     M TGF SG +G+ GG F   LM+  
Sbjct: 117 EKQARKVAISRFGYWNIQEGDNLYVINLWVAVPLTMATGFFSGMVGISGGSFLIPLMVVG 176

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
            G  +  A  T+  + A  A          G     L             +     +++ 
Sbjct: 177 CGVPVRTAVGTATAMLAATALTGFAGNALHGGFDPEL------------AIPCGAAAVVG 224

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             + +K++     K L I   ++    +   
Sbjct: 225 GLIGSKIALKTKPKSLKIISGVLTIVAAIAM 255



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +  +  +G  SG+ G+ GG  ++P++        +   + +  A+GT+  ++A T+
Sbjct: 144 LWVAVPLTMATGFFSGMVGISGGSFLIPLMV-------VGCGVPVRTAVGTATAMLAATA 196

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +  F  +  HG  + ++         +  ++ S +        L     +  ++  I ML
Sbjct: 197 LTGFAGNALHGGFDPELAIPCGAAAVVGGLIGSKIALKTKPKSLKIISGVLTIVAAIAML 256

Query: 143 KR 144
             
Sbjct: 257 AN 258


>gi|315918157|ref|ZP_07914397.1| membrane protein [Fusobacterium gonidiaformans ATCC 25563]
 gi|317058278|ref|ZP_07922763.1| membrane protein [Fusobacterium sp. 3_1_5R]
 gi|313683954|gb|EFS20789.1| membrane protein [Fusobacterium sp. 3_1_5R]
 gi|313692032|gb|EFS28867.1| membrane protein [Fusobacterium gonidiaformans ATCC 25563]
          Length = 255

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 94/252 (37%), Gaps = 27/252 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++    FL+  +  + G GGG++ +P     F  +G+      H+A+GT+    A  ++ 
Sbjct: 8   ILSALCFLAAFIDSIAG-GGGMISLPA----FMAVGLPP----HIALGTNKISAAIGTLA 58

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S +   R   I + ++  +  +     +        +   +         + + I  L  
Sbjct: 59  SSLNFLRSNKIILPLVTRFAPLALFGAIFGVKTALLIPPKYFQPISFFLLICVFIYTLIN 118

Query: 145 DRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
             L  E  +            I+ ++ GF  G LG G G F   +++  +      ATAT
Sbjct: 119 KNLGEEYDYQGINSVNIKWGCIFSLLIGFYDGFLGPGTGSFLIFMLIKIFHLDFAHATAT 178

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++      +  +             +  G +N+   LI+  I I+     + L+   
Sbjct: 179 TKFINLASNIISAALY------------FHAGKLNLPLGLIMAVIMIIGAFAGSSLAIYK 226

Query: 259 GKKYLTIGFSMI 270
           G K++   F ++
Sbjct: 227 GSKFIKPVFLVV 238


>gi|320332807|ref|YP_004169518.1| hypothetical protein Deima_0189 [Deinococcus maricopensis DSM
           21211]
 gi|319754096|gb|ADV65853.1| protein of unknown function DUF81 [Deinococcus maricopensis DSM
           21211]
          Length = 255

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 76/198 (38%), Gaps = 12/198 (6%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            +   +A G SL ++A  +  +   H R   +  ++    +    + T   +L+ + +++
Sbjct: 40  GVPPKLATGASLMIVAANATGALGAHIRARRVQYRMAALIVLTGTLGTAAGTLVHARLNE 99

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYC----ERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
             L  AFA   +L+ + +L+              P   V  + G + G  +G  GVGGG 
Sbjct: 100 RALTLAFAALMVLIAVNLLRGRTPEPPADAGAHVPRRKVL-LAGTLVGLTTGVFGVGGGF 158

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
                +L  G  + +A  TS     +IA  ++L           +P        +   L 
Sbjct: 159 VIIPALLALGLGMRQAVPTSL---LIIALNSVLALGLRALSGAAVPVGDA----VPMGLG 211

Query: 240 ILPISILITPLATKLSYM 257
            L  S L   +A +L + 
Sbjct: 212 GLAGSALAARIAPRLGHA 229


>gi|17988810|ref|NP_541443.1| permease [Brucella melitensis bv. 1 str. 16M]
 gi|261318511|ref|ZP_05957708.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|17984630|gb|AAL53707.1| permease [Brucella melitensis bv. 1 str. 16M]
 gi|261297734|gb|EEY01231.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
          Length = 315

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 89/273 (32%), Gaps = 56/273 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G LSGLFGVGGG ++ P+L           +I   +A+ T    +  +S
Sbjct: 23  MLVLLGMGAAVGFLSGLFGVGGGFLITPLLIFY--------NIPPAIAVATGANQVIASS 74

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
           V   + H +  T+++K+    +    + +++   + S +         ++  +  F   +
Sbjct: 75  VSGALAHFKRRTLDIKLGLFLVAGGILGSLIGIFVFSWLRDLGQLDLIVSILYVFFLGTI 134

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R      +         G   
Sbjct: 135 GGLMLVESVQALRRAKKGQGGAVRRSGQHTWIHRLPFKMRFRASTIYVSVIPVLGIGFFI 194

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G LS  +GVGGG      +++           TS      +     +++  +        
Sbjct: 195 GLLSSVMGVGGGFIMVPALIYLLHVPTNVVVGTSLFQITFVTAFTTVMQATTNQS----- 249

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 ++I    +++   ++      +    +
Sbjct: 250 ------IDIVLAFLLMVGGVIGAQYGARAGRKL 276


>gi|66046854|ref|YP_236695.1| hypothetical protein Psyr_3625 [Pseudomonas syringae pv. syringae
           B728a]
 gi|63257561|gb|AAY38657.1| Protein of unknown function DUF81 [Pseudomonas syringae pv.
           syringae B728a]
          Length = 243

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 90/229 (39%), Gaps = 16/229 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++     I    I   +T
Sbjct: 24  AIPALGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALMLIIPSFIFAWLT 83

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSG 171
           SL+   +D   +   F  F +++ +  + +      +           ++ G+ +G   G
Sbjct: 84  SLLAVRIDPQGMRLGFVGFLVVLTVFNVAQMYWRSTQATGGLRHEKWLWLLGVGSGVTGG 143

Query: 172 ALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
             GVGGG+    ++   +GA+   A   +  ++A              + L+    WS+G
Sbjct: 144 LFGVGGGVVATPILTSVFGATQVVAQGLALSLAAP-----STGITLVTYALHDHVNWSMG 198

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                  + +    +       KL++ + ++ L + F + +   + + A
Sbjct: 199 -------IPLAIGGLASISWGVKLAHSLPERTLRLMFCVFLVLCAVILA 240


>gi|94314267|ref|YP_587476.1| hypothetical protein Rmet_5348 [Cupriavidus metallidurans CH34]
 gi|93358119|gb|ABF12207.1| conserved hypothetical protein; putative membrane protein
           [Cupriavidus metallidurans CH34]
          Length = 331

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 79/291 (27%), Gaps = 54/291 (18%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
               +      + G +  L G GG ++ VP+L     L   +      +A+G S  V   
Sbjct: 50  SIYAVGASLGAIVGLILALTGAGGAILAVPLLVFGLHLRMAEAGPIALLAVGVSAAV--- 106

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                 +   R G +  +          + + V   +   V    L   FAI    + + 
Sbjct: 107 ----GALIGLRAGIVRYRAAAMMAASGVLASPVGLWLAHRVPNGPLTVLFAIVLGWVAVR 162

Query: 141 MLKRDRLY------------------CERKFPDNYVKYIWGMVTGFLS---GALGVGGGI 179
           M ++ R                     +   P   +    G      S        G G 
Sbjct: 163 MFRQSRAPQPVASAAAAATAASTAMLPQGPLPPCQLDDATGRFVWTASCTRALAASGIGA 222

Query: 180 --------------FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
                             L     A +    ATS  V  L++   ++    +        
Sbjct: 223 GFLSGLLGVGGGFVIVPALRRATNAPVKTIVATSLAVITLVSASGVVSTALA-------- 274

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
               G +N          ++L   +    +  +  + L  GF+++    + 
Sbjct: 275 ----GNMNWHVAAPFAAGAMLGMLVGRLFASRLSGQRLQQGFAVVAGLIAI 321



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 30/74 (40%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           + TSL VI   S    +     G +N  +   +     +  +V  L  S +    L + F
Sbjct: 253 VATSLAVITLVSASGVVSTALAGNMNWHVAAPFAAGAMLGMLVGRLFASRLSGQRLQQGF 312

Query: 131 AIFCLLMGILMLKR 144
           A+   L+ I M+ +
Sbjct: 313 AVVAGLIAIGMVVK 326



 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 27/125 (21%)

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKA-------TATSAGVSALIAFPALLV 213
            G + G +    G GG I    L++F     + +A          SA V ALI   A   
Sbjct: 58  LGAIVGLILALTGAGGAILAVPLLVFGLHLRMAEAGPIALLAVGVSAAVGALIGLRA--- 114

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
                           G V   A  ++    +L +P+   L++ +    LT+ F++++  
Sbjct: 115 ----------------GIVRYRAAAMMAASGVLASPVGLWLAHRVPNGPLTVLFAIVLGW 158

Query: 274 TSFVF 278
            +   
Sbjct: 159 VAVRM 163


>gi|331016866|gb|EGH96922.1| hypothetical protein PLA106_12525 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 255

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 86/229 (37%), Gaps = 16/229 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++     I    I   +T
Sbjct: 36  AIPALGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALMLIIPSFIFAWLT 95

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGI----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           S++   +D   +   F  F +++ +     M  R+ L       + Y+  +         
Sbjct: 96  SMLAVRIDPQSMRLGFVAFLVILTVFNVAQMYWRNTLASGGLRHEKYLWLLGVGSGVTGG 155

Query: 171 GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
                GG + T +L   +GA+   A   +  ++A              + L+    WS+G
Sbjct: 156 LFGVGGGVVATPILTSVFGATQVVAQGLALSLAAP-----STGITLVTYALHDHVNWSMG 210

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                  + +    +       KL++ + ++ L + F + +   + + A
Sbjct: 211 -------IPLAVGGLASISWGVKLAHSLPERTLRLMFCVFLVLCAVILA 252


>gi|149194358|ref|ZP_01871455.1| hypothetical protein CMTB2_07151 [Caminibacter mediatlanticus TB-2]
 gi|149135533|gb|EDM24012.1| hypothetical protein CMTB2_07151 [Caminibacter mediatlanticus TB-2]
          Length = 264

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 83/211 (39%), Gaps = 14/211 (6%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            +  D  +  + L+IVASF++G + G+ G G GLV+VP    +F L G+       +A+G
Sbjct: 6   SILSDYFLVGVLLLIVASFIAGFIDGIAG-GAGLVLVP----SFILAGLPP----QIALG 56

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
               V    ++ +     +   I    +   + +  +   V +  I  +D S + K   +
Sbjct: 57  QEKLVSTIGTIPAIFNFLKSKQILWDYVLYGVPMALLGAFVGAKFILILDPSIVGKMVVL 116

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYI----WGMVTGFLSGALGVGGGIFTNLLM-LF 187
              +  I+ +        +       KYI       + GF  G  G G G    L + L 
Sbjct: 117 LMPIGLIISIIPKNKTTLQTKETKLKKYILYPSVFFIIGFYDGFFGPGTGSLLILALHLI 176

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSG 218
              S+  A+ATS   +      A +    +G
Sbjct: 177 MKMSLVSASATSKIFNFASNIGAFIAFFIAG 207


>gi|307594749|ref|YP_003901066.1| hypothetical protein Vdis_0619 [Vulcanisaeta distributa DSM 14429]
 gi|307549950|gb|ADN50015.1| protein of unknown function DUF81 [Vulcanisaeta distributa DSM
           14429]
          Length = 334

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 81/265 (30%), Gaps = 52/265 (19%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VP+L+           I +  A G SL     TS  +   + R    N++I       
Sbjct: 34  VLVPLLTLFL-------GIPIAYAAGASLISTIATSSGAASAYIRDRITNVRIGMGLEIA 86

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN---------- 156
               ++V SL  +++    L     +   ++ +  +       + + PD           
Sbjct: 87  TTTGSIVGSLTAAYIYAHGLAWIVYVVFGIVILTSIIPTAQRGKYEIPDPRKPDWTTRVF 146

Query: 157 ----------------------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIY 193
                                 ++  +     GF+SG LG+G G    L M +     + 
Sbjct: 147 KLYGSYYDDAIKMEVKYWGVRWWLGELIMFFAGFISGLLGIGSGALKVLGMDWAMNLPMK 206

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            +T TS  +  + A     +             W  G++      +     ++     TK
Sbjct: 207 VSTTTSNFMIGVTAATGSALY------------WYFGYIQPMMAAVTAIGVLIGAMSGTK 254

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVF 278
           +   I  K +   F  I+       
Sbjct: 255 ILVRITNKQVRWVFLAILAFLGMEM 279



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G +SGL G+G G + V  +  A        ++ M V+  TS  +I  T+      + 
Sbjct: 176 FFAGFISGLLGIGSGALKVLGMDWAM-------NLPMKVSTTTSNFMIGVTAATGSALYW 228

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I   +       + I  +  + ++  +    +   F      +G+ ML +
Sbjct: 229 YFGYIQPMMAAVTAIGVLIGAMSGTKILVRITNKQVRWVFLAILAFLGMEMLLK 282


>gi|317152720|ref|YP_004120768.1| hypothetical protein Daes_1006 [Desulfovibrio aespoeensis Aspo-2]
 gi|316942971|gb|ADU62022.1| protein of unknown function DUF81 [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 427

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 101/300 (33%), Gaps = 69/300 (23%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    + I     +G ++G  G GGG ++ P L        +   I   +A+GT L  I 
Sbjct: 78  LGIFLVSIGIGMGAGLITGCIGAGGGFIIAPAL--------MSAGIKGILAVGTDLFHIF 129

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL-------MISHVDKSFLNKAFAI 132
             ++M  + HR+ G +++ +   ++    I      +       +   +  +F+   ++ 
Sbjct: 130 AKAIMGSVIHRKLGNVSVPLAAVFLIGAIIGASAGGIINRVLYEINPILSDAFITTVYSF 189

Query: 133 FCLLMGILML------------------------------------------KRDRLYCE 150
               +G   L                                              L   
Sbjct: 190 MLGFLGFYSLIDFLRCRKAGNSSCSHGGKTEGAELGGMAKSLQNVKFPPMVSFDHDLTPG 249

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPA 210
            +        + G++ G  +G +GVGGG  T  + ++             GVS++     
Sbjct: 250 GRQISWVFLVLSGILVGLAAGIMGVGGGFLTFPIFVYV-----------LGVSSMTTVGT 298

Query: 211 LLVRIYSGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            + +I    G   +  +++ GF+     + +L  S+L   +   ++ ++    +   ++M
Sbjct: 299 DIFQIVFTAGFASISQYAIYGFIFYTLAMGMLLGSLLGIQIGALVTKVVPGITIRGFYAM 358



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 56/171 (32%), Gaps = 10/171 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS- 82
             ++++  L G  +G+ GVGGG +  P+             +     +GT +  I  T+ 
Sbjct: 256 VFLVLSGILVGLAAGIMGVGGGFLTFPIFVYVL-------GVSSMTTVGTDIFQIVFTAG 308

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-- 140
             S  ++  +G I   +    +    +   + +L+   V    +   +A+  L   I   
Sbjct: 309 FASISQYAIYGFIFYTLAMGMLLGSLLGIQIGALVTKVVPGITIRGFYAMAVLSGFINRI 368

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
                +L      P +          G  +  + +GG     +        
Sbjct: 369 FALPGKLGEMDILPISPALGSILNEIGIWAFFIVIGGFSVWVIGTFLLNIK 419


>gi|307129731|ref|YP_003881747.1| hypothetical protein Dda3937_01468 [Dickeya dadantii 3937]
 gi|306527260|gb|ADM97190.1| putative membrane protein [Dickeya dadantii 3937]
          Length = 412

 Score = 51.2 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 95/254 (37%), Gaps = 26/254 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            LI++    +G++SG+ G GG ++++P L+ AF       +    +A+  ++  I+   +
Sbjct: 174 ILILLLGLFAGSVSGIVGTGGSIILLPALAWAFG----PQAAVPIMAIAATMSNISKVIL 229

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI-FCLLMGILML 142
                      IN++ L  +       +++ + ++  +     +    + F LL+ +  L
Sbjct: 230 W-------RNAINLRALGCYCLPGIPASIIGASLLWAMPVRLSSLCIGLFFLLLIPLRHL 282

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            R R +      ++    + G V GFL+G +    G  T  L   YG       AT +  
Sbjct: 283 ARQRAFS----LNDSQLAVAGGVVGFLTGVV-FSTGPLTLPLFAGYGLLKGALLATESAA 337

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
           S +I             G+ G  P S+    + A L++    +    +  +    +    
Sbjct: 338 SLVIYLTKAATF-----GVVGALPLSV----LCAGLMVGLTQVAGVYIGKRFVLRLSDAL 388

Query: 263 LTIGFSMIMFTTSF 276
                  +M     
Sbjct: 389 FNRLVDGMMLIAGL 402


>gi|330953556|gb|EGH53816.1| hypothetical protein PSYCIT7_19706 [Pseudomonas syringae Cit 7]
          Length = 243

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 90/229 (39%), Gaps = 16/229 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++     I    I   +T
Sbjct: 24  AIPALGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALMLIIPSFIFAWLT 83

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSG 171
           SL+   VD   +   F  F +++ +  + +     ++           ++ G+ +G   G
Sbjct: 84  SLLAVRVDPQGMRLGFVGFLVVLTVFNVAQMYWRSKQAAGGLRHEKWLWLLGVGSGVTGG 143

Query: 172 ALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
             GVGGG+    ++   +G +   A   +  ++A              + L+    WS+G
Sbjct: 144 LFGVGGGVVATPILTSVFGTTQVVAQGLALSLAAP-----STGITLVTYALHDHVNWSMG 198

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                  + +    +       KL++ + ++ L + F + +   + + A
Sbjct: 199 -------IPLAIGGLASISWGVKLAHSLPERTLRLMFCVFLVFCAVILA 240


>gi|239628759|ref|ZP_04671790.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518905|gb|EEQ58771.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 249

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 73/200 (36%), Gaps = 14/200 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  +++ A+ + G   GL GV G   ++P++      MG+ + + +      S      +
Sbjct: 3   FWLIVVAANLVVGAFVGLTGVAG--FLLPIVYTGPLAMGVTEGLAL------SFAAFIVS 54

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             +  + +++ G +++              ++   +   + +S +     +  LL GI +
Sbjct: 55  GALGSVNYKKAGNLDIPFGIRLSIGSLAGAILGVKLNLVIPESIVKVILYVVVLLSGISI 114

Query: 142 LKRDRLYCERKFPDNYV------KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           L R             +          G VTG +    G GG +    L++  G  I  A
Sbjct: 115 LLRKDKKDGDGKKGYVISEHLAATLALGFVTGAVCALSGAGGPVLVMPLLVVLGIGIRTA 174

Query: 196 TATSAGVSALIAFPALLVRI 215
              +   S  I  PA +  +
Sbjct: 175 VGVALFNSVFIGIPACIGYM 194


>gi|213158910|ref|YP_002320908.1| hypothetical protein AB57_3611 [Acinetobacter baumannii AB0057]
 gi|213058070|gb|ACJ42972.1| hypothetical protein AB57_3611 [Acinetobacter baumannii AB0057]
          Length = 258

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 93/256 (36%), Gaps = 25/256 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D I  +I  +F +G +    G GGGL+ +P +   F       ++     +GT+      
Sbjct: 6   DVILSLIFFAFTAGAIDAAVG-GGGLIQIPGIMSTF------PNMSTATVIGTNKVSSIF 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     +   +  K+L        I++   +  +S + +S L     +  +++ I 
Sbjct: 59  GTASAAYTFAKKVKLQWKLLAVIAICALISSFAGAACLSLIPQSVLRPFVFVMLIVIAIY 118

Query: 141 MLKRDRLYC--ERKFPDNYVKYIWGMV---TGFLSGALGVG-GGIFTNLLMLFYGASIYK 194
            L +         +     +  + G+     GF  G  G G G  F    + F       
Sbjct: 119 TLVKKNFGQVHTEQKLTTKMLVLAGIGSLAIGFYDGIFGPGTGSFFIFFFIRFLQVDFLH 178

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A S   + +    AL   I +G  +            +   L++   ++L + +  + 
Sbjct: 179 ASALSKIGNFMTNLAALSFLIPTGHAI------------LHIGLMMAAANVLGSIVGVRT 226

Query: 255 SYMIGKKYLTIGFSMI 270
           +   G  ++ I F ++
Sbjct: 227 ALKYGSGFVRIIFLIL 242


>gi|323701985|ref|ZP_08113654.1| protein of unknown function DUF81 [Desulfotomaculum nigrificans DSM
           574]
 gi|323533071|gb|EGB22941.1| protein of unknown function DUF81 [Desulfotomaculum nigrificans DSM
           574]
          Length = 362

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 73/228 (32%), Gaps = 46/228 (20%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
            F+ G LSG  G GG  VM P +            +    A+ T+L      +++   +H
Sbjct: 30  GFMGGVLSGFLGSGGAFVMTPGMMAL--------GVPGIAAVSTNLAHKFGKAIVGARKH 81

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHV--------DKSFLNKAFAIFCLLMGILM 141
            + G ++ K+    +  L +   +   +   +           +++  F +    +   +
Sbjct: 82  AKMGNVDAKLGIFMVIFLLLGVNMAVYLQKAIFDSMGKAGSNLYISIVFVVLLSGLSAFI 141

Query: 142 L---KRDRLYCERKFPDNYVKY---------------------------IWGMVTGFLSG 171
           L    R++     K     V                             +  M TG+L+G
Sbjct: 142 LRDIFRNKSGQSAKVSGGTVLADKIAKINLPPMIYFKVANRRVSLWFVALVAMATGWLAG 201

Query: 172 ALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            +GVGG I    ++   G     A  T   ++             +G+
Sbjct: 202 TVGVGGFIGVPAMIYLLGIPTMVAAGTELFLAIFSGASGAFQYALNGF 249


>gi|118430922|ref|NP_147029.2| hypothetical protein APE_0183.1 [Aeropyrum pernix K1]
 gi|116062247|dbj|BAA79095.2| conserved hypothetical protein [Aeropyrum pernix K1]
          Length = 266

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 96/269 (35%), Gaps = 34/269 (12%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M     D  +  + L I+    +  L+ L GVGGG+  VP+       +G+  +    +A
Sbjct: 1   MTLAPLDLSLADMALRILMGVAAAALASLSGVGGGVFFVPIFLFI---VGLPPN----IA 53

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +G+S  V+A  S++S + + R GT  +      +  +     + + +++++D   L    
Sbjct: 54  VGSSKVVVAIVSIVSGLTYLRQGTTRLSRAAPLMVSMIPGAALGAYLVAYIDPRLLEVIL 113

Query: 131 AIFCLLMGILMLKRDRLYC--------------ERKFPDNYVKYIWGMVTGFLSGALGVG 176
            +F     + +L                       +    Y+    G+  G  +G  G G
Sbjct: 114 GLFITYYSLRLLLVTARKALAREAKPVEEEGSRGPRPGGRYLMLATGVAAGLFAGLTGTG 173

Query: 177 GGIFTNLLMLFYGA-SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           GG     ++       + +A A S      I+  A++      W          G V+ G
Sbjct: 174 GGAILVPMLTLLRIAKLKEAVAIS---MLSISLGAVVSAAIHVWT---------GVVDFG 221

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLT 264
                   +++ + L    +  +    L 
Sbjct: 222 GAAPFALGALIGSILGPMAASRLSTDALR 250


>gi|329909491|ref|ZP_08275074.1| putative integral membrane protein [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327546443|gb|EGF31443.1| putative integral membrane protein [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 254

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 85/258 (32%), Gaps = 21/258 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +    I A  ++    G F  G G+V VP+++           I    A    L ++   
Sbjct: 9   FYAAAIPAVLITSISKGGFAGGLGIVAVPLMALV---------ISPTQAASIMLPILCVM 59

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            +  F+  R+    +  +LK  +    I  ++ +LM   ++ + +     +  L+  +  
Sbjct: 60  DLTGFVTWRKRA--DPGLLKLLLPGALIGILIGALMFHQLNDAMVTAMVGVMALVFALNY 117

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
             + ++      PD     +W  ++GF S  +   GG    + +L           T   
Sbjct: 118 WFKGKVRVPVHLPDKASAGLWSFLSGFTS-FVSHAGGPPMAIYLLPKHLDKAIYVGTVTI 176

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           +   I +  ++     G              N+    ++ P++ +   L   +   I  K
Sbjct: 177 LFTTINYAKIVPYALLGQLSVD---------NLATAAVLSPLAPIGVKLGAWMHDRIDAK 227

Query: 262 YLTIGFSMIMFTTSFVFA 279
                    +  T    +
Sbjct: 228 VFYRISYGFLLLTGLKLS 245


>gi|167034563|ref|YP_001669794.1| hypothetical protein PputGB1_3567 [Pseudomonas putida GB-1]
 gi|166861051|gb|ABY99458.1| protein of unknown function DUF81 [Pseudomonas putida GB-1]
          Length = 253

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 73/202 (36%), Gaps = 13/202 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ V +F +G +    G GGGL+ +P L                  +G++       +
Sbjct: 4   IAVLCVFAFAAGLIDAAVG-GGGLIQIPALFNVLPTAQPAAL------LGSNKLASVCGT 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +     R  T++  ++        + +   +  +S V  S +  A  +  +LM I   
Sbjct: 57  AFAARSFIRKVTLDWGLIVPAALSAFVMSFAGAATVSLVPSSVMRPAVLVLIVLMAIYTF 116

Query: 143 KRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +       K       +  +  + G   GF  G  G G G     L + F+      A+
Sbjct: 117 CKKDFGTLHKPARIGRKEQCLAVLIGGAIGFYDGLFGPGTGSFLIFLFIRFFALDFLHAS 176

Query: 197 ATSAGVSALIAFPALLVRIYSG 218
           A++  V+      AL+  + +G
Sbjct: 177 ASAKVVNIATNLAALVFFVPTG 198


>gi|170722394|ref|YP_001750082.1| hypothetical protein PputW619_3223 [Pseudomonas putida W619]
 gi|169760397|gb|ACA73713.1| protein of unknown function DUF81 [Pseudomonas putida W619]
          Length = 253

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 88/255 (34%), Gaps = 25/255 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ + +F +G +    G GGGL+ +P L                  +G++       +
Sbjct: 4   IAVLSLFAFAAGLIDAAVG-GGGLIQIPALFNVLPAAQPAAL------LGSNKLASVCGT 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +     R  T++  ++        I +   +  +S V  S +  A  +  +LM I   
Sbjct: 57  AFAARSFIRKVTLDWGLIVPAALSAFIMSFAGAATVSLVPPSVMRPAVLVLIVLMAIYTF 116

Query: 143 KRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +               +  +  + G   GF  G  G G G     L + F+      A+
Sbjct: 117 CKKDFGTLHAPAKIGRKEQCLAVLIGGAIGFYDGLFGPGTGSFLIFLFIRFFALDFLHAS 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A++  V+      AL+  + S            G V     L +   ++L     T L+ 
Sbjct: 177 ASAKVVNIATNLAALVFFVPS------------GNVLYAIALPMAACNVLGALTGTWLAV 224

Query: 257 MIGKKYLTIGFSMIM 271
             G  ++   F +++
Sbjct: 225 RKGAGFVRGLFLVLL 239


>gi|332296487|ref|YP_004438410.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
 gi|332179590|gb|AEE15279.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
          Length = 359

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 97/290 (33%), Gaps = 57/290 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++   F+ G +SG  G GG  V+ P +            +   +A+ +++    P +
Sbjct: 20  MLFLLFVGFVGGLVSGFIGSGGAFVLTPGMMSI--------GVPGTIAVASNMCHKFPKA 71

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--------DKSFLNKAFAIFC 134
           ++   +  ++G +++K+         +   V   +   +           +++  F I  
Sbjct: 72  MVGAYKRWKYGQVDIKLGLIMAISAILGVQVGIQIQEAILKTWGNAGSNLYVSTMFIIVL 131

Query: 135 LLMGILMLKRDRLYCERKFP-----------------------------DNYVKYIWGMV 165
            ++G  + K      + K                                 +V +  G  
Sbjct: 132 TIVGTYVFKDAVNMAKSKNTKEESTALAKRIQSINIPPMIYFDKIGAKISFWVTFPIGFC 191

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           TG L+  + VGG I    ++   GA+    TAT   ++ ++     +    +G       
Sbjct: 192 TGLLAATIAVGGFIGVPGMIYILGATSTVGTATELVIAFVMGLVGSVKWAMNGM------ 245

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                 ++I   LIIL  S++   +    +  +    +      IM   +
Sbjct: 246 ------IDIRLTLIILAGSLIGVQIGAAATTFVKPYLIKFVMGFIMLLVA 289


>gi|325272231|ref|ZP_08138651.1| hypothetical protein G1E_05038 [Pseudomonas sp. TJI-51]
 gi|324102637|gb|EGC00064.1| hypothetical protein G1E_05038 [Pseudomonas sp. TJI-51]
          Length = 253

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 88/255 (34%), Gaps = 25/255 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ V +F +G +    G GGGL+ +P L                  +G++       +
Sbjct: 4   IAVLSVFAFAAGLIDAAVG-GGGLIQIPALFNVLPTAQPAAL------LGSNKLASVCGT 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +     R  T++  ++        + +   +  +S +    +  A  +  +LM +   
Sbjct: 57  AFAARSFIRKVTLDWGLIVPAAVSAFVMSFAGAATVSLLPPGVMRPAVLVLIVLMAVYTF 116

Query: 143 KRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +       K       +  +  + G   GF  G  G G G     L + F+      A+
Sbjct: 117 CKKDFGTLHKPARIGRKEQCLAVLIGGAIGFYDGLFGPGTGSFLIFLFIRFFALDFLHAS 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A++  V+      AL+  + S            G V     L +   +IL     T L+ 
Sbjct: 177 ASAKVVNIATNLAALVFFVPS------------GNVLYAIALPMALCNILGALTGTWLAV 224

Query: 257 MIGKKYLTIGFSMIM 271
             G  ++   F +++
Sbjct: 225 RKGAGFVRGLFLVLL 239


>gi|229188056|ref|ZP_04315144.1| Permease [Bacillus cereus BGSC 6E1]
 gi|228595442|gb|EEK53174.1| Permease [Bacillus cereus BGSC 6E1]
          Length = 250

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 92/243 (37%), Gaps = 32/243 (13%)

Query: 51  VLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPIT 110
           +L+     +GI  S    +A+GT L     T +    +H +  TIN +++K        +
Sbjct: 19  LLTPFLLALGITPS----IAVGTDLVYNTITKMFGISQHWKQKTINFRLVKYLAIGSIPS 74

Query: 111 TVVTSLMISHVD------KSFLNKAFAIFCLLMGILMLKR--------DRLYCERKFPDN 156
            V+    I  +       +  +        ++  I +  +          ++ ++     
Sbjct: 75  AVIAIATIQFLPIFHQNREGTIKYIIGYVLIVAAISIFIKIFFYDESIPNVFQKKTLEQK 134

Query: 157 YVKYIW-GMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVR 214
               I+ G + GF+ G   VG G    ++M++ Y     +   T    + L+   A ++ 
Sbjct: 135 KNLTIFIGGILGFIVGLTSVGSGSLFAIVMIYLYQLKPPELVGTDIAHAFLLVAVASIIN 194

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           I            +LG V+   V+ +L  SI    + +KLS  I  K L I  ++I+  +
Sbjct: 195 I------------NLGNVDYNLVINLLIGSIPGVIIGSKLSTKIPIKPLQILLAIIICIS 242

Query: 275 SFV 277
              
Sbjct: 243 GLK 245



 Score = 37.7 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 46/118 (38%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I    + G + GL  VG G +   V+   +QL   +        +GT +        +
Sbjct: 137 LTIFIGGILGFIVGLTSVGSGSLFAIVMIYLYQLKPPEL-------VGTDIAHAFLLVAV 189

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + +   G ++  ++ + +       ++ S + + +    L    AI   + G+ ++
Sbjct: 190 ASIININLGNVDYNLVINLLIGSIPGVIIGSKLSTKIPIKPLQILLAIIICISGLKLI 247


>gi|148558007|ref|YP_001257765.1| hypothetical protein BOV_A0772 [Brucella ovis ATCC 25840]
 gi|161620881|ref|YP_001594767.1| hypothetical protein BCAN_B0839 [Brucella canis ATCC 23365]
 gi|163844943|ref|YP_001622598.1| hypothetical protein BSUIS_B0815 [Brucella suis ATCC 23445]
 gi|225686586|ref|YP_002734558.1| hypothetical protein BMEA_B0802 [Brucella melitensis ATCC 23457]
 gi|254700037|ref|ZP_05161865.1| hypothetical protein Bsuib55_04142 [Brucella suis bv. 5 str. 513]
 gi|254703157|ref|ZP_05164985.1| hypothetical protein Bsuib36_04327 [Brucella suis bv. 3 str. 686]
 gi|254710929|ref|ZP_05172740.1| hypothetical protein BpinB_11845 [Brucella pinnipedialis B2/94]
 gi|254712598|ref|ZP_05174409.1| hypothetical protein BcetM6_04322 [Brucella ceti M644/93/1]
 gi|254715670|ref|ZP_05177481.1| hypothetical protein BcetM_04342 [Brucella ceti M13/05/1]
 gi|254720078|ref|ZP_05181889.1| hypothetical protein Bru83_11168 [Brucella sp. 83/13]
 gi|256015587|ref|YP_003105596.1| hypothetical protein BMI_II816 [Brucella microti CCM 4915]
 gi|256029311|ref|ZP_05442925.1| hypothetical protein BpinM2_01403 [Brucella pinnipedialis
           M292/94/1]
 gi|256043698|ref|ZP_05446622.1| hypothetical protein Bmelb1R_04362 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256059000|ref|ZP_05449211.1| hypothetical protein Bneo5_01393 [Brucella neotomae 5K33]
 gi|256111258|ref|ZP_05452289.1| hypothetical protein Bmelb3E_01468 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256157507|ref|ZP_05455425.1| hypothetical protein BcetM4_01440 [Brucella ceti M490/95/1]
 gi|256253516|ref|ZP_05459052.1| hypothetical protein BcetB_04307 [Brucella ceti B1/94]
 gi|260167597|ref|ZP_05754408.1| hypothetical protein BruF5_04272 [Brucella sp. F5/99]
 gi|265986311|ref|ZP_06098868.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|294853407|ref|ZP_06794079.1| hypothetical protein BAZG_02366 [Brucella sp. NVSL 07-0026]
 gi|148369292|gb|ABQ62164.1| putative membrane protein [Brucella ovis ATCC 25840]
 gi|161337692|gb|ABX63996.1| Hypothetical protein BCAN_B0839 [Brucella canis ATCC 23365]
 gi|163675666|gb|ABY39776.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|225642691|gb|ACO02604.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
 gi|255998247|gb|ACU49934.1| hypothetical protein BMI_II816 [Brucella microti CCM 4915]
 gi|264658508|gb|EEZ28769.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|294819062|gb|EFG36062.1| hypothetical protein BAZG_02366 [Brucella sp. NVSL 07-0026]
          Length = 316

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 89/273 (32%), Gaps = 56/273 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G LSGLFGVGGG ++ P+L           +I   +A+ T    +  +S
Sbjct: 24  MLVLLGMGAAVGFLSGLFGVGGGFLITPLLIFY--------NIPPAIAVATGANQVIASS 75

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
           V   + H +  T+++K+    +    + +++   + S +         ++  +  F   +
Sbjct: 76  VSGALAHFKRRTLDIKLGLFLVAGGILGSLIGIFVFSWLRDLGQLDLIVSILYVFFLGTI 135

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R      +         G   
Sbjct: 136 GGLMLVESVQALRRAKKGQGGAVRRSGQHTWIHRLPFKMRFRASTIYVSVIPVLGIGFFI 195

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G LS  +GVGGG      +++           TS      +     +++  +        
Sbjct: 196 GLLSSVMGVGGGFIMVPALIYLLHVPTNVVVGTSLFQITFVTAFTTVMQATTNQS----- 250

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 ++I    +++   ++      +    +
Sbjct: 251 ------IDIVLAFLLMVGGVIGAQYGARAGRKL 277


>gi|87118707|ref|ZP_01074606.1| hypothetical protein MED121_16809 [Marinomonas sp. MED121]
 gi|86166341|gb|EAQ67607.1| hypothetical protein MED121_16809 [Marinomonas sp. MED121]
          Length = 253

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 87/248 (35%), Gaps = 25/248 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + ++   + L+G +  + G GGGL+ +P L  A         +    A+GT+      
Sbjct: 6   ELLAMLFCVAVLAGFIDSVSG-GGGLIALPTLMLA--------GLSPVQAIGTNKFQAIF 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             + S     +HG I++K  +  I V  I   +    +  +    L         L+ + 
Sbjct: 57  GKISSVRYFLKHGLIDVKKFRLAIVVTFICAGLGGYAVQLIPNQDLVLYIPWMIGLVALY 116

Query: 141 MLKRDR---LYCERKFPDNYVKYIWGMVTGFLSGALG-VGGGIFTNLLMLFYGASIYKAT 196
            +   R   +   ++       +I      F  G  G      F+   +   G S  KA 
Sbjct: 117 TIFSPRMADIDTSQRLTIAAFSFIIVPFLAFYDGFFGPAASSFFSISFIALLGFSTAKAV 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  +       A++  I  G  +     W +GF+       +     +     +K+ +
Sbjct: 177 AHTKLLLLFANGAAIITFIIGGHII-----WQIGFI-------MAIGQWIGGHYGSKMVH 224

Query: 257 MIGKKYLT 264
           + G K + 
Sbjct: 225 LKGSKIVK 232


>gi|218516297|ref|ZP_03513137.1| hypothetical conserved membrane protein [Rhizobium etli 8C-3]
          Length = 132

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 51/130 (39%), Gaps = 8/130 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   I   F +  + G  G+  G++     + +    G+  +    +   T +     T+
Sbjct: 5   IFFFIAVGFCAQIVDGALGMAFGVLS----TTSLLAFGVPAANASAMTHVTEM----FTT 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H  H  ++ +++        I   + + +++++D   +    + + L +G+L+ 
Sbjct: 57  AASGISHAYHRNVDWRLVARLAPAGMIGGAIGAYLLANIDGKVIAPFVSAYLLAIGLLIF 116

Query: 143 KRDRLYCERK 152
            +      R+
Sbjct: 117 YKAFRPPSRR 126


>gi|206890452|ref|YP_002248603.1| hypothetical protein THEYE_A0761 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206742390|gb|ACI21447.1| membrane protein, putative [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 362

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 96/292 (32%), Gaps = 60/292 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +     + G +SG  G GG  V+ P +            +   VA+ +++    P +
Sbjct: 16  VMYLFFVGLVGGLVSGFIGSGGAFVLTPGMMSI--------GVPGLVAVASNMCHKFPKA 67

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--------DKSFLNKAFAIFC 134
           ++  ++  + G +++K+            +  + +  ++           +++ AF I  
Sbjct: 68  LVGAIKRAKFGQVDVKLGLVMGASAEAGVLFGAHIQEYIKKTFGDAGSNLYVSVAFVIVL 127

Query: 135 LLMGILMLKRD-------------------RLYCERKFPDNYVKY-------------IW 162
            ++G  +L                      +       P   V +               
Sbjct: 128 GIVGSYVLLDALKTKDDSQANKPEKITKIAKWIQSVNIPGTMVYFKSLNAKISFLFTIPL 187

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           G  TG L+  + VGG +    +M   GA    A+AT   ++ ++                
Sbjct: 188 GFATGMLAATIAVGGFLGVPAMMYILGAPALMASATELVIAFVMGLVGSFKYAMG----- 242

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                  GFV+I   +IIL  S+    L    +  +    + I  S+IM   
Sbjct: 243 -------GFVDIRLAMIILAGSLFGVQLGAIGTTYVKDYMIKIVMSVIMLVV 287


>gi|57864831|gb|AAW57006.1| hypothetical protein [Cyanothece sp. ATCC 51142]
          Length = 244

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 90/247 (36%), Gaps = 19/247 (7%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM-K 98
            G+GG    +P+L+     +G   S  + + +  SL  I  + ++          +   +
Sbjct: 1   MGLGGAEFRLPILA---GPLGYSASQVVPLNLAISLITILISLLVRGKILSLSTVMPYSQ 57

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG-ILMLKRDRLYCERKF-PDN 156
           ++   I    I   + +    H+    L +   +F +++G  LM++           P  
Sbjct: 58  VIIFLIVGAMIMAFIGASWAKHLSNEKLERIILVFLIIIGCALMIEGFLPESLPALVPSI 117

Query: 157 YVKYIW-----GMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPA 210
               I      G++ G +S  LGV GG      ++F +G  I  A  +S  +S       
Sbjct: 118 PGLQIVVALGCGLIIGLVSSLLGVAGGELIIPTLIFAFGVDIKIAGTSSLLISLPTVIVG 177

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           LL   + G  ++  P           VL +   S++   +   L  +I    L I   +I
Sbjct: 178 LLRYHHQGSFVDKQPLQDT-------VLPMGLGSLIGAIIGGLLVGIIPSNLLKIALGII 230

Query: 271 MFTTSFV 277
           +   +  
Sbjct: 231 LNIAALK 237



 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 51/129 (39%), Gaps = 12/129 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I + +    + G +S L GV GG +++P L  AF        + + +A  +SL +  PT 
Sbjct: 122 IVVALGCGLIIGLVSSLLGVAGGELIIPTLIFAF-------GVDIKIAGTSSLLISLPTV 174

Query: 83  VMSFMEHRRHGTI-----NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           ++  + +   G+          +        I  ++  L++  +  + L  A  I   + 
Sbjct: 175 IVGLLRYHHQGSFVDKQPLQDTVLPMGLGSLIGAIIGGLLVGIIPSNLLKIALGIILNIA 234

Query: 138 GILMLKRDR 146
            + +    +
Sbjct: 235 ALKVFLHSK 243


>gi|113971274|ref|YP_735067.1| hypothetical protein Shewmr4_2939 [Shewanella sp. MR-4]
 gi|113885958|gb|ABI40010.1| protein of unknown function DUF81 [Shewanella sp. MR-4]
          Length = 300

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 96/261 (36%), Gaps = 21/261 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +         +   G GGG++ +PV S   F  +    +  M    G + G I   S  
Sbjct: 52  FVFLGITGAIFANATGAGGGVIFIPVFSSLNFSEVQSVSTSFMIQCFGMTAGAI---SWS 108

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVT---SLMISHVDKSFLNKAFAIFCLLMGILM 141
            +     H           I +    +V+    S +      S L+ +F++F +++GI +
Sbjct: 109 DYYRRHHHHDKTWSGFIPSILLAATCSVLGLWSSQLWQLNSPSSLHTSFSLFSIVLGIAI 168

Query: 142 LKRDRLYCERKFPDNYV----KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           +   +    +    N +      + G + G ++  L VG G    + ++  G     A A
Sbjct: 169 IISSQRRTLQSHRLNALDYCWLAVIGYLGGIITAWLSVGVGELLVIYLMLRGVCAKMAVA 228

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
               VSA+  + A  + +++                   VL   P +I+   LA KL+  
Sbjct: 229 IGVVVSAITVWSASPIHVFASSSHALFEL----------VLFAGPGAIIGGLLARKLALF 278

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +  K L + FS  +  T FV 
Sbjct: 279 LPVKTLKLFFSSWIILTGFVM 299



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 6/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           C + V  +L G ++    VG G ++V        L G+     M VA+G  +  I   S 
Sbjct: 188 CWLAVIGYLGGIITAWLSVGVGELLV----IYLMLRGV--CAKMAVAIGVVVSAITVWSA 241

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                         +++        I  ++   +   +    L   F+ + +L G +M+
Sbjct: 242 SPIHVFASSSHALFELVLFAGPGAIIGGLLARKLALFLPVKTLKLFFSSWIILTGFVMI 300


>gi|114704915|ref|ZP_01437823.1| hypothetical protein FP2506_08261 [Fulvimarina pelagi HTCC2506]
 gi|114539700|gb|EAU42820.1| hypothetical protein FP2506_08261 [Fulvimarina pelagi HTCC2506]
          Length = 310

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 76/228 (33%), Gaps = 46/228 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +I+      G LSGLFGVGGG ++ P+L           +I   +A+ T    +  +S
Sbjct: 14  LFVIVGMGMAVGFLSGLFGVGGGFLITPLLIFY--------NIPPAIAVATGANQVVASS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLM 137
               + H + GT+++K+    +    + ++    +   +         ++  + +F   +
Sbjct: 66  FSGALAHYKRGTVDLKLGSMLLAGGALGSLAGVWLFGLLRSIGQLDLAVSLLYVVFLGSI 125

Query: 138 GILML--------------------------------KRDRLYCERKFPDNYVKYIWGMV 165
           G LML                                 + R    R +         G  
Sbjct: 126 GGLMLNESVRSMLRSRKGTTGSDLRRPGQHSWVLGLPLKMRFPRSRLYISIIPVITLGFF 185

Query: 166 TGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
            G L+  +GVGGG      M++           TS       A    +
Sbjct: 186 IGVLAAIMGVGGGFVMVPAMIYLLRVPTNVVIGTSLYQIMFTAAVTTV 233



 Score = 43.5 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  +I   F  G L+ + GVGGG VMVP +    +       +  +V +GTSL  I  T+
Sbjct: 176 IIPVITLGFFIGVLAAIMGVGGGFVMVPAMIYLLR-------VPTNVVIGTSLYQIMFTA 228

Query: 83  -VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
            V + ++   + TI++ +    +    I     +     +   
Sbjct: 229 AVTTVLQAATNQTIDIVLAFLLMLGGVIGAQFGAEAGRKLRGD 271


>gi|75908012|ref|YP_322308.1| hypothetical protein Ava_1791 [Anabaena variabilis ATCC 29413]
 gi|75701737|gb|ABA21413.1| Protein of unknown function DUF81 [Anabaena variabilis ATCC 29413]
          Length = 282

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
             ++P L    +L        M  A+GTSL +IA  ++  F+ +  H T++  ++  +I 
Sbjct: 164 FAIIPALVLLAKL-------PMKAAIGTSLFIIAMNAIAGFLGYLGHITLDWNLIFSFIL 216

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
                T++ + +   V  + L K+F  F L +   +L ++R     K
Sbjct: 217 AASGGTLLGAYLTRFVPAARLQKSFGYFLLAVAAFVLFQNRGVFSPK 263



 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 74/239 (30%), Gaps = 29/239 (12%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
             A  ++     I    A+  +L ++   S++  + H R G I  K    +     +   
Sbjct: 26  VLALPVLVYVMGIAPKNAIAMTLVIVGTVSLLGSISHWRAGNIQWKTAYIFGAATMLGAF 85

Query: 113 VTSLMIS--HVDKSFLNKAFAIFCLLMGILMLKRDRLYCER------KFPDNYVKYIWGM 164
             + + +   +  +     F +  L+  ++M++R               P     ++W M
Sbjct: 86  FGARLATLPFITDTIQMLLFGLLMLVASVIMIQRSMGTKTTYDELPYPPPVCKHCWLWLM 145

Query: 165 VTGFLSGALGVGGG-----IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
             G + G L    G          L+L     +  A  TS  + A+ A    L       
Sbjct: 146 SEGIIVGGLTGLVGVGGGFAIIPALVLLAKLPMKAAIGTSLFIIAMNAIAGFLGY----- 200

Query: 220 GLNGLPPWSLGFV--NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                    LG +  +   +   +  +   T L   L+  +    L   F   +   + 
Sbjct: 201 ---------LGHITLDWNLIFSFILAASGGTLLGAYLTRFVPAARLQKSFGYFLLAVAA 250


>gi|237739558|ref|ZP_04570039.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
 gi|229423166|gb|EEO38213.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
          Length = 256

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 96/272 (35%), Gaps = 27/272 (9%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           + +D  V    ++ V  F++  +  + G GGGL+ +P         G       H+A+GT
Sbjct: 1   MFQDFDVMKFLILAVCCFIASVVDAISG-GGGLISLPAYFAV----GFPP----HMALGT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +      ++  S  +  +   +N++I+           V+       +D  +        
Sbjct: 52  NKLSAFLSTFASAFKFWKAKKVNVEIVSKLFLFSLAGAVLGVKTAVSIDTKYFKPISFAI 111

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKY-----IWGMVTGFLSGALGVGGGIFTNLLML-F 187
            +++ +  LK   +     +     K      I     GF  G LG G   F    ++  
Sbjct: 112 LIVVFLYALKNKSMGEVNYYKGTTPKTILLGKIMAFCLGFYDGFLGPGTAAFLMFCLIKI 171

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           +      A+  +  ++    F +L+V  +            LG +N    + I  +  + 
Sbjct: 172 FKLDFSSASGNTKILNLSSNFASLVVFAF------------LGKLNWLYGIPIALVMTVG 219

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             +  +L+ + G K++   F ++        +
Sbjct: 220 AIIGARLAILKGNKFIKPVFLVVTIVLILKMS 251


>gi|227538474|ref|ZP_03968523.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241660|gb|EEI91675.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 106

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 9/109 (8%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG--TIN 96
           + G GGG +++P L            + M  A+GTSL +IA  S++ F+         ++
Sbjct: 1   MVGAGGGFLIIPTLVLF-------AGMPMKKAIGTSLMIIAFNSLIGFVGFVEIDGHEVD 53

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            ++L  +     +  ++ +L+   +  S L  +F  F L+MGI++L R+
Sbjct: 54  WRLLFLFSIAAILGILIGTLLSRKISGSNLKTSFGWFVLIMGIMILVRE 102



 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 11/107 (10%)

Query: 172 ALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
            +G GGG      ++ + G  + KA  TS  + A  +    +  +               
Sbjct: 1   MVGAGGGFLIIPTLVLFAGMPMKKAIGTSLMIIAFNSLIGFVGFVEIDGHE--------- 51

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            V+   + +    +IL   + T LS  I    L   F   +     +
Sbjct: 52  -VDWRLLFLFSIAAILGILIGTLLSRKISGSNLKTSFGWFVLIMGIM 97


>gi|239918630|ref|YP_002958188.1| predicted permease [Micrococcus luteus NCTC 2665]
 gi|281415152|ref|ZP_06246894.1| predicted permease [Micrococcus luteus NCTC 2665]
 gi|239839837|gb|ACS31634.1| predicted permease [Micrococcus luteus NCTC 2665]
          Length = 256

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 79/238 (33%), Gaps = 27/238 (11%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++MVP+L+           +    A+  SL  +  TS+++   H R G +  +    +  
Sbjct: 25  ILMVPLLTYV-------AWLDPQEAIAGSLFAVGVTSLVAVALHARAGNVRWRTGGLFAA 77

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER-------KFPDNYV 158
              +  V+  L+ S +    L   FA+  LL    M++      +               
Sbjct: 78  GGVVGAVLGGLLGSALPGPVLMGGFAVMMLLTARGMIRGRTGDDDGGPTGDDAPRLRVGR 137

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYS 217
             + G+  G ++G +G GGG      ++   G  +  A  TS  V  +      + ++  
Sbjct: 138 LLVVGLGVGLVTGLVGAGGGFLIVPALVLLAGLPMAAAMGTSLLVITVQTLAGFVGKL-- 195

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                  P W         +L +  +S+        L   +    L   F   +    
Sbjct: 196 ---PAVEPDW-------PFLLALTGVSVAGALAGVALMQRVPAATLRQAFGWFVLVMG 243



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 7/101 (6%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
            GGG ++VP L            + M  AMGTSL VI   ++  F+        +   L 
Sbjct: 154 AGGGFLIVPALVLL-------AGLPMAAAMGTSLLVITVQTLAGFVGKLPAVEPDWPFLL 206

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               V     +    ++  V  + L +AF  F L+MG+ +L
Sbjct: 207 ALTGVSVAGALAGVALMQRVPAATLRQAFGWFVLVMGVAVL 247


>gi|119873364|ref|YP_931371.1| hypothetical protein Pisl_1881 [Pyrobaculum islandicum DSM 4184]
 gi|119674772|gb|ABL89028.1| protein of unknown function DUF81 [Pyrobaculum islandicum DSM 4184]
          Length = 243

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 8/123 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +   L ++  F+ G  S LFGVGGG + VP L       G D       A   S+G+I P
Sbjct: 119 NIPWLGLLLIFIGGFASSLFGVGGGTIFVPALILI---SGFDP----KSAAAMSMGIIFP 171

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMGI 139
           T+V S   +   G +N+ +         I +  +S  ++  +    + + F I+  ++GI
Sbjct: 172 TAVSSTTIYAALGVLNLPLAVAIAVGSFIGSYTSSRYIMPKLKSGTVRRLFVIYVFVIGI 231

Query: 140 LML 142
             L
Sbjct: 232 YYL 234



 Score = 42.8 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 83/227 (36%), Gaps = 38/227 (16%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             +    A   S+  I  TS ++   +R+   IN ++L  ++ +  +   +++++     
Sbjct: 34  SGVVFQTAAAASMFSIVVTSAVAVYNYRKM--INFRVLAGYMAISLLAAAISAVVSVKYS 91

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI----------WGMVTGFLSGA 172
             ++  A+ I+ + +G+++LK  R      +    + +I                     
Sbjct: 92  GPWIKLAYGIYLIAVGMVLLKNARPRRNIPWLGLLLIFIGGFASSLFGVG---------- 141

Query: 173 LGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
              GG IF   L+L  G     A A S G+    A  +  +              +LG +
Sbjct: 142 ---GGTIFVPALILISGFDPKSAAAMSMGIIFPTAVSSTTIYA------------ALGVL 186

Query: 233 NIGAVLIILPISILITPLATK-LSYMIGKKYLTIGFSMIMFTTSFVF 278
           N+   + I   S + +  +++ +   +    +   F + +F     +
Sbjct: 187 NLPLAVAIAVGSFIGSYTSSRYIMPKLKSGTVRRLFVIYVFVIGIYY 233


>gi|241663302|ref|YP_002981662.1| hypothetical protein Rpic12D_1707 [Ralstonia pickettii 12D]
 gi|240865329|gb|ACS62990.1| protein of unknown function DUF81 [Ralstonia pickettii 12D]
          Length = 273

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 79/270 (29%), Gaps = 42/270 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             + G +  L G GG +V VP+L     L   + +    +A+G S G+ A   +      
Sbjct: 15  GSVVGLILALTGAGGAIVAVPLLIFGLHLSVPEAAPIALLAVGLSAGLGAMLGL------ 68

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
            R G +  K          + +     +   V  + L   FA+    + + M ++ R   
Sbjct: 69  -REGKVRYKAAGLIALCGVVISPFGIWVAHRVPNTPLTLLFAVVLAYVAVRMFRQARAAP 127

Query: 150 ER-----------KFPDNYVKYIWGMVTGFLSGALGVGG------------GIFTNLLML 186
                               K +W +       A GVG              +    L  
Sbjct: 128 STEPRPRRTAPPCHLDSTTAKLVWTLPCARALAASGVGAGFLSGLLGVGGGFVIVPALRR 187

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
                +    ATS  V AL++   +                  G V+    L     ++ 
Sbjct: 188 ATDLPMQTIVATSLAVIALVSAGGVAASAIG------------GHVDWHIALPFAAGALT 235

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              +  + +  +    L  GF+      + 
Sbjct: 236 GMLVGRRFAQHLAGPALQQGFAAFAGFVAL 265



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 29/81 (35%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + M   + TSL VIA  S          G ++  I   +        +V      H+  
Sbjct: 190 DLPMQTIVATSLAVIALVSAGGVAASAIGGHVDWHIALPFAAGALTGMLVGRRFAQHLAG 249

Query: 124 SFLNKAFAIFCLLMGILMLKR 144
             L + FA F   + + M+ R
Sbjct: 250 PALQQGFAAFAGFVALGMIVR 270



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 11/124 (8%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
              V    G V G +    G GG I    L++F              +S   A P  L+ 
Sbjct: 7   GWIVSTGLGSVVGLILALTGAGGAIVAVPLLIF-----------GLHLSVPEAAPIALLA 55

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +    GL  +     G V   A  +I    ++I+P    +++ +    LT+ F++++   
Sbjct: 56  VGLSAGLGAMLGLREGKVRYKAAGLIALCGVVISPFGIWVAHRVPNTPLTLLFAVVLAYV 115

Query: 275 SFVF 278
           +   
Sbjct: 116 AVRM 119


>gi|152990936|ref|YP_001356658.1| hypothetical protein NIS_1192 [Nitratiruptor sp. SB155-2]
 gi|151422797|dbj|BAF70301.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 242

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 72/226 (31%), Gaps = 21/226 (9%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            ++VP+L              +  A+G S+  +  +S+     + +     +        
Sbjct: 23  TILVPILLYL--------GFDIKEAVGISVTQMVFSSLFGSYLNFKKNIFKIHEGLALGI 74

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
              I  + +   +S V    L   F  F L       K   +    K     V    G+V
Sbjct: 75  GGFIGALGSGYFLSIVSSRVLEWMFLGFVLFAMYRFFKAPAIEGGAKEIPPLVILGVGVV 134

Query: 166 TGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            G L+ ++GVGG I    +++ F+   + KA +         +    L            
Sbjct: 135 VGLLAISIGVGGSILITPILVGFFHMDVKKAASMGLFFVIFSSISGFLSLSL-------- 186

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
                G ++    L++   S+       KL++M           +I
Sbjct: 187 ----FGHIDYKDGLLVGVSSLFGVYFGIKLAHMTHHAKFKKALIVI 228


>gi|313498169|gb|ADR59535.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 253

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 89/255 (34%), Gaps = 25/255 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ V +F +G +    G GGGL+ +P L           S      +G++       +
Sbjct: 4   IAVLSVFAFAAGLIDAAVG-GGGLIQIPALFNVL------PSAQPAALLGSNKLASVCGT 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +     R  T++  ++        + +   +  +S V  S +  A  +  +LM +   
Sbjct: 57  AFAARSFIRKVTLDWGLIVPAALSAFVMSFAGAATVSLVPPSVMRPAVLVLIVLMAVYTF 116

Query: 143 KRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +               +  +  + G   GF  G  G G G     L + F+      A+
Sbjct: 117 CKKDFGTLHTPARVGRKEQCLAVLIGGAIGFYDGLFGPGTGSFLIFLFIRFFALDFLHAS 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A++  V+      AL+  + +            G V     L +   +IL     T L+ 
Sbjct: 177 ASAKVVNIATNLAALVFFVPT------------GNVLYAIALPMAVCNILGALTGTWLAV 224

Query: 257 MIGKKYLTIGFSMIM 271
             G  ++   F +++
Sbjct: 225 RKGAGFVRGLFLVLL 239


>gi|158423157|ref|YP_001524449.1| putative permease [Azorhizobium caulinodans ORS 571]
 gi|158330046|dbj|BAF87531.1| putative permease [Azorhizobium caulinodans ORS 571]
          Length = 317

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 8/89 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +       G +SG+FGVGGG +M P+L       G+  +    VA+ +    +A +S   
Sbjct: 17  LFALGAAVGFVSGMFGVGGGFLMTPLLLFI----GVPPA----VAVASVSTHMAASSFSG 68

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVT 114
            + + R G +++++    +      TVV 
Sbjct: 69  ALSYFRKGMVDLQLSGMLLMGGLTGTVVG 97



 Score = 45.1 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 27/62 (43%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           +  +  G   GF+SG  GVGGG     L+LF G     A A+ +   A  +F   L    
Sbjct: 15  FTLFALGAAVGFVSGMFGVGGGFLMTPLLLFIGVPPAVAVASVSTHMAASSFSGALSYFR 74

Query: 217 SG 218
            G
Sbjct: 75  KG 76


>gi|254241181|ref|ZP_04934503.1| hypothetical protein PA2G_01870 [Pseudomonas aeruginosa 2192]
 gi|126194559|gb|EAZ58622.1| hypothetical protein PA2G_01870 [Pseudomonas aeruginosa 2192]
          Length = 298

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 7/121 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + L  VA  L G   GL G GGG++ VP L+    L        +H A+   L  I 
Sbjct: 26  MDPLLLGGVAGVLVGLSMGLTGAGGGVLAVPALTMVLGLD-------LHQAVPLGLLAIG 78

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +++  ++  RHG +  +       +  +T  + + +   +    +   F +  +++ +
Sbjct: 79  SAALLGSLDGLRHGLVRYRAALFMAAIGVLTASLGTRLAHRLPTDAVMLLFCLVLIVIAV 138

Query: 140 L 140
            
Sbjct: 139 R 139



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 13/118 (11%)

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           + G++ G   G  G GGG+     +    G  +++A      +  L    A L+    G 
Sbjct: 34  VAGVLVGLSMGLTGAGGGVLAVPALTMVLGLDLHQAV----PLGLLAIGSAALLGSLDGL 89

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                     G V   A L +  I +L   L T+L++ +    + + F +++   +  
Sbjct: 90  RH--------GLVRYRAALFMAAIGVLTASLGTRLAHRLPTDAVMLLFCLVLIVIAVR 139


>gi|326565202|gb|EGE15388.1| hypothetical protein E9K_03236 [Moraxella catarrhalis 103P14B1]
 gi|326574005|gb|EGE23954.1| hypothetical protein E9W_05784 [Moraxella catarrhalis CO72]
          Length = 254

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 77/203 (37%), Gaps = 13/203 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D +  +++ S ++G +  + G GGGL+ +PVL  A              A+  +     
Sbjct: 8   IDIVVFLLIGSCIAGFIDAICG-GGGLISIPVLLTA--------GFSPAQAIAANKLQGT 58

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ S   +   G ++ K+L   +    I   + +  +S +  + L K      + M +
Sbjct: 59  VGAIASTQYYLNKGVLDKKLLITLLPPAIIGGAIGTATLSLLPSTLLEKILPFLLIAMAL 118

Query: 140 LMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
                  L     + K       +    V  F  G  G G G F  L +    G +  KA
Sbjct: 119 YFYFSKNLSDTTKKAKMGVFLFSWTIIPVIAFYDGFFGAGAGTFYLLAVTSLLGFAATKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
            A S  ++      +LLV IY G
Sbjct: 179 MAYSRVLNLASNLISLLVFIYLG 201


>gi|330834088|ref|YP_004408816.1| hypothetical protein Mcup_0223 [Metallosphaera cuprina Ar-4]
 gi|329566227|gb|AEB94332.1| conserved hypothetical protein [Metallosphaera cuprina Ar-4]
          Length = 289

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-------------SICMHVA 70
            L IVA  + G   GL G GG ++ VP+L     L  +                +  H+A
Sbjct: 12  ILAIVAGIIVGFSLGLIGGGGSILAVPLLLYFVGLASVPPQYSSTPALASQYIDVVDHMA 71

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+   +   + ++   H R G + +     +     +   + S +        L   F
Sbjct: 72  LGTTALAVGLNAYINSYIHFRRGNVKILEGVIFTIPGVVGASLGSYVSHITPGKSLLFFF 131

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKY--------IWGMVTGFLSGALGVGGGIFTN 182
            I  + +  LML++      ++  +               G+V GF SG  G+GGG    
Sbjct: 132 GILMIGVAFLMLRQKSADKLKQDQNGGGLARLSLAKVIPTGLVVGFASGFFGIGGGFLIV 191

Query: 183 LLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
             +LF  G  + KA  TS          +  V    G+ L 
Sbjct: 192 PGLLFSTGICMIKAVGTSLIAVGTFGITSAAVYSIYGYVLP 232


>gi|291530941|emb|CBK96526.1| Predicted permeases [Eubacterium siraeum 70/3]
          Length = 126

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+   L+G  + + G+GGG +           + +   I   +A G +L    P +++S 
Sbjct: 3   ILVGMLTGATASM-GLGGGFI-------LLVYLSVFTEIPQDIAQGINLLFFLPIALLSL 54

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + H ++   ++K++  ++ +     +V S +    D + L K F IF L +GI  L 
Sbjct: 55  VIHIKNKLTDLKLVGKYLILGLPCAIVGSYVAGITDVAVLRKLFGIFVLYIGINQLY 111


>gi|237743310|ref|ZP_04573791.1| membrane protein [Fusobacterium sp. 7_1]
 gi|256028663|ref|ZP_05442497.1| transporter [Fusobacterium sp. D11]
 gi|260495070|ref|ZP_05815199.1| membrane protein [Fusobacterium sp. 3_1_33]
 gi|289766576|ref|ZP_06525954.1| membrane protein [Fusobacterium sp. D11]
 gi|229433089|gb|EEO43301.1| membrane protein [Fusobacterium sp. 7_1]
 gi|260197513|gb|EEW95031.1| membrane protein [Fusobacterium sp. 3_1_33]
 gi|289718131|gb|EFD82143.1| membrane protein [Fusobacterium sp. D11]
          Length = 254

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 93/263 (35%), Gaps = 27/263 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++ V  F++  +  + G GGGL+ +P         G       H+A+GT+      ++
Sbjct: 8   FLILAVFCFIAAVVDAISG-GGGLISLPAYFAV----GFPP----HIALGTNKLSAFLST 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S  +  +   +N++I+           V+       +D  +         +L+ +  L
Sbjct: 59  FASAFKFWKAKKVNVEIVSKLFVFSLAGAVLGVKTAVSIDSKYFKPISFGILILVFLYAL 118

Query: 143 KRDRLYCERKFPDNYVKY-----IWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
           K   L  +  +     K      I     GF  G LG G   F    ++  +      A+
Sbjct: 119 KNKSLGEKNYYKGTTPKTILLGKIMAFCLGFYDGFLGPGTAAFLMFCLIKIFKLDFSSAS 178

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++    F +L+V  +            LG +N    L I  +      + +KL+ 
Sbjct: 179 GNTKILNLSSNFASLVVFAF------------LGKLNWVYGLSIAVVMTFGAIIGSKLAI 226

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
           + G K++   F ++        +
Sbjct: 227 LKGNKFIKPVFLVVTIVLILKMS 249


>gi|224372429|ref|YP_002606801.1| conserved hypothetical membrane protein, DUF81 family [Nautilia
           profundicola AmH]
 gi|223590017|gb|ACM93753.1| conserved hypothetical membrane protein, DUF81 family [Nautilia
           profundicola AmH]
          Length = 245

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 96/260 (36%), Gaps = 23/260 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + Y  + I+A+ LS   + L GVG    MVPV+            I  + A    L V  
Sbjct: 1   MFYFEIFIIATVLSAFFA-LGGVGSATAMVPVMHWM--------GIDFNFAKAIGLFVNT 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T++ +   + +   +++K        L       ++   H+    +   FAIF      
Sbjct: 52  TTTLTATFMNIKRKVLDIKFALPLAISLAAFAPFGAMYSKHIPVHEVKWLFAIFLFFSAS 111

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
           ++L   +   +  +   +V  + G + GF+SG LG+GGG     +M+  G    K   T 
Sbjct: 112 MILFGKK-EQKFHYDKQWVMVLIGAIVGFISGLLGIGGGALLMPIMILLGFDAKKLAVTM 170

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY-MI 258
           + V     F A L  +            S    +   + +    +IL   +     +  +
Sbjct: 171 SFVIPFSTFAAFLTYM------------SFVKFDWVILTVAAAGAILGGYIGNYFMHFKL 218

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            ++ +     ++++  +   
Sbjct: 219 NQQQIKKIIGILLYIIAIKM 238


>gi|169632278|ref|YP_001706014.1| hypothetical protein ABSDF0334 [Acinetobacter baumannii SDF]
 gi|169794518|ref|YP_001712311.1| hypothetical protein ABAYE0328 [Acinetobacter baumannii AYE]
 gi|169147445|emb|CAM85306.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter baumannii AYE]
 gi|169151070|emb|CAO99728.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter baumannii]
          Length = 256

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 93/256 (36%), Gaps = 25/256 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D I  +I  +F +G +    G GGGL+ +P +   F       ++     +GT+      
Sbjct: 4   DVILSLIFFAFTAGAIDAAVG-GGGLIQIPGIMSTF------PNMSTATVIGTNKVSSIF 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     +   +  K+L        I++   +  +S + +S L     +  +++ I 
Sbjct: 57  GTASAAYTFAKKVKLQWKLLAVIAICALISSFAGAACLSLIPQSVLRPFVFVMLIVIAIY 116

Query: 141 MLKRDRLYC--ERKFPDNYVKYIWGMV---TGFLSGALGVG-GGIFTNLLMLFYGASIYK 194
            L +         +     +  + G+     GF  G  G G G  F    + F       
Sbjct: 117 TLVKKNFGQVHTEQKITTKMLVLAGIGSLAIGFYDGIFGPGTGSFFIFFFIRFLQVDFLH 176

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A S   + +    AL   I +G  +            +   L++   ++L + +  + 
Sbjct: 177 ASALSKIGNFMTNLAALSFLIPTGHAI------------LHIGLMMAAANVLGSIVGVRT 224

Query: 255 SYMIGKKYLTIGFSMI 270
           +   G  ++ I F ++
Sbjct: 225 ALKYGSGFVRIIFLIL 240


>gi|32266526|ref|NP_860558.1| hypothetical protein HH1027 [Helicobacter hepaticus ATCC 51449]
 gi|32262577|gb|AAP77624.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 222

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 76/209 (36%), Gaps = 15/209 (7%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+       S +S   +   G ++MK  +  + +  +   V ++++  ++ + L+K 
Sbjct: 17  ALATNKLQACVGSFVSAAHYYHQGLVDMKESRAVMIIALLFGAVGAILVQFIEIALLSKI 76

Query: 130 FAIFCLLMGILMLKRDRLYCER--KFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLML 186
                + +G   L    +  E   K P     +I   + G   G LG+G G     LL+ 
Sbjct: 77  LPFVMIAVGAYFLLSPNISEEDRAKNPHKIFLFISIAIAGLYGGFLGIGIGSFILALLVS 136

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
             G  + KA A S  +   I   + L  I              G V     +I+    I+
Sbjct: 137 IGGYGLSKALAHSRWIVFSINIASTLFFILG------------GNVLWILGIIMCVGQII 184

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                 +L+   G + +      + F  S
Sbjct: 185 GASFGARLAIKHGARIIRPIVICVCFALS 213


>gi|154247874|ref|YP_001418832.1| hypothetical protein Xaut_3951 [Xanthobacter autotrophicus Py2]
 gi|154161959|gb|ABS69175.1| protein of unknown function DUF81 [Xanthobacter autotrophicus Py2]
          Length = 282

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 64/189 (33%), Gaps = 12/189 (6%)

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
             N  I+ + +    +     +   + +    L +  A+  +L+ + +L           
Sbjct: 96  ATNWPIILNLLAGSLVGAWFGAGWATRLSSRTLYRVLAVLLVLIAVALLFGHGSTAASAL 155

Query: 154 PDNYVKYIWGMV----TGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAF 208
                  + G++     G ++  +GV GG +    L+L +GA I  A + S  VS     
Sbjct: 156 LSGPWLIVAGVIAGFAIGVVASLMGVAGGELLIPTLVLLFGADIKLAGSLSLAVSLPTMI 215

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
                                   N   V ++   SI+   +   L  ++ ++ L    +
Sbjct: 216 VGFTRYSRDNAFATVAQ-------NKVFVAVMAVGSIVGAFIGGHLLGLVPEQVLLPILA 268

Query: 269 MIMFTTSFV 277
           +I+  +S  
Sbjct: 269 LILVVSSVK 277



 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 48/127 (37%), Gaps = 12/127 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I   ++A F  G ++ L GV GG +++P L   F          + +A   SL V  PT
Sbjct: 161 LIVAGVIAGFAIGVVASLMGVAGGELLIPTLVLLFGAD-------IKLAGSLSLAVSLPT 213

Query: 82  SVMSFMEHRRHGTI-----NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            ++ F  + R         N   +        +   +   ++  V +  L    A+  ++
Sbjct: 214 MIVGFTRYSRDNAFATVAQNKVFVAVMAVGSIVGAFIGGHLLGLVPEQVLLPILALILVV 273

Query: 137 MGILMLK 143
             + + +
Sbjct: 274 SSVKVWR 280


>gi|34763063|ref|ZP_00144036.1| Membrane protein [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
 gi|27887262|gb|EAA24360.1| Membrane protein [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
          Length = 254

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 92/263 (34%), Gaps = 27/263 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++ V  F++  +  + G GGGL+ +P         G       H+A+GT+      ++
Sbjct: 8   FLILAVFCFIAAVVDAISG-GGGLISLPAYFAV----GFPP----HIALGTNKLSAFLST 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S  +  +   +N +I+           V+       +D  +         +L+ +  L
Sbjct: 59  FASAFKFWKAKKVNAEIVSKLFIFSLAGAVLGVKTAVSIDSKYFKPISFGILILVFLYAL 118

Query: 143 KRDRLYCERKFPDNYVKYIW-----GMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
           K   L  +  +     K I          GF  G LG G   F    ++  +      A+
Sbjct: 119 KNKSLGEKNYYKGTTPKTIILGKIMAFCLGFYDGFLGPGTAAFLMFCLIKIFKLDFSSAS 178

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++    F +L+V  +            LG +N    L I  +      + +KL+ 
Sbjct: 179 GNTKILNLSSNFASLVVFAF------------LGKLNWVYGLSIAVVMTFGAIIGSKLAI 226

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
           + G K++   F ++        +
Sbjct: 227 LKGNKFIKPVFLVVTIVLILKMS 249


>gi|114327341|ref|YP_744498.1| permease [Granulibacter bethesdensis CGDNIH1]
 gi|114315515|gb|ABI61575.1| permease [Granulibacter bethesdensis CGDNIH1]
          Length = 273

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 85/268 (31%), Gaps = 35/268 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             ++    G L G+ GVGGG +M P+L            +    A+GT L   A T  + 
Sbjct: 22  YALSGLGVGCLVGMTGVGGGSLMTPLLVLVL-------GVHPQTAIGTDLLFAAITKSVG 74

Query: 86  FMEHRRHGTINMKILKDWIFV-LPITTVVTSLMISHVD-----KSFLNKAFAIFCLLMGI 139
              H     I+  +++      +P + +    +  H          +        LL   
Sbjct: 75  TSVHGFSRNIDWAVVRRLASGSIPASALTLLWLHGHGGLEPEISRIMGNILGGALLLTAG 134

Query: 140 LMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY--G 189
            +  R         R         + +  ++G+  G L     VG G     +++     
Sbjct: 135 SLFFRPWLHRIAGARRKPLSPARVSSLTVLFGICLGVLVSLSSVGAGAIGVTVLIALYPE 194

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
            S+ +   +    +  +              + GL  W LG VN   +L +L  S+    
Sbjct: 195 LSMARIVGSDVAHAVPLTM------------IAGLGHWMLGSVNGILLLSLLAGSLPGVI 242

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + + LS  +    L      I+      
Sbjct: 243 VGSLLSPRMPADILRALLGSILTIVGLR 270



 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 6/119 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L ++     G L  L  VG G + V VL   +        + M   +G+ +    P +++
Sbjct: 161 LTVLFGICLGVLVSLSSVGAGAIGVTVLIALY------PELSMARIVGSDVAHAVPLTMI 214

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + + H   G++N  +L   +       +V SL+   +    L         ++G+ +L 
Sbjct: 215 AGLGHWMLGSVNGILLLSLLAGSLPGVIVGSLLSPRMPADILRALLGSILTIVGLRLLF 273


>gi|26990638|ref|NP_746063.1| hypothetical protein PP_3933 [Pseudomonas putida KT2440]
 gi|24985624|gb|AAN69527.1|AE016586_6 conserved hypothetical protein [Pseudomonas putida KT2440]
          Length = 253

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 89/255 (34%), Gaps = 25/255 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ V +F +G +    G GGGL+ +P L           S      +G++       +
Sbjct: 4   IAVLSVFAFAAGLIDAAVG-GGGLIQIPALFNVL------PSAQPAALLGSNKLASVCGT 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +     R  T++  ++        + +   +  +S V  S +  A  +  +LM +   
Sbjct: 57  AFAARSFIRKVTLDWGLIVPAALSAFVMSFAGAATVSLVPPSVMRPAVLVLIVLMAVYTF 116

Query: 143 KRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +               +  +  + G   GF  G  G G G     L + F+      A+
Sbjct: 117 CKKDFGTLHTPAQVGRKEQCLAVLIGGAIGFYDGLFGPGTGSFLIFLFIRFFALDFLHAS 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A++  V+      AL+  + +            G V     L +   +IL     T L+ 
Sbjct: 177 ASAKVVNIATNLAALVFFVPT------------GNVLYAIALPMAVCNILGALTGTWLAV 224

Query: 257 MIGKKYLTIGFSMIM 271
             G  ++   F +++
Sbjct: 225 RKGAGFVRGLFLVLL 239


>gi|294675795|ref|YP_003576410.1| hypothetical protein RCAP_rcc00238 [Rhodobacter capsulatus SB 1003]
 gi|294474615|gb|ADE84003.1| protein of unknown function DUF81, transmembrane [Rhodobacter
           capsulatus SB 1003]
          Length = 252

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 94/253 (37%), Gaps = 27/253 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  +D    +I A+F++G +  + G GGGL+ +PVL  A              A  T+  
Sbjct: 3   EVSLDLALSLIGAAFVAGFVDAIAG-GGGLITLPVLLLA--------GATPLQAFSTNKV 53

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             A  +  + + +   G +N++       +  ++ +  + ++S +    L +      + 
Sbjct: 54  QGAFGAATAALTYAAKGQVNLRAQLGAASLAFLSGLAGAFLVSVLPTEALRRVLPFILIA 113

Query: 137 MGILMLKRDRL----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGAS 191
           +      R  L      ER  P  +  ++   + GF  G +G G G F     ++  G  
Sbjct: 114 IAAFFALRKGLDDTDRAERIRPAAFAAFVV-PLIGFYDGLIGPGAGAFYMIGFVMLAGYG 172

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           + KATA +  ++       L+     G      P W  G       + +    +    L 
Sbjct: 173 VLKATAHTKLLNFASNLGGLVAFAAIG-----APWWVTG-------IAMGLAQVAGASLG 220

Query: 252 TKLSYMIGKKYLT 264
            +L+   G + + 
Sbjct: 221 ARLAMKKGARLIK 233


>gi|237742788|ref|ZP_04573269.1| membrane protein [Fusobacterium sp. 4_1_13]
 gi|294784758|ref|ZP_06750046.1| membrane protein [Fusobacterium sp. 3_1_27]
 gi|229430436|gb|EEO40648.1| membrane protein [Fusobacterium sp. 4_1_13]
 gi|294486472|gb|EFG33834.1| membrane protein [Fusobacterium sp. 3_1_27]
          Length = 254

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 92/263 (34%), Gaps = 27/263 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++ V  F++  +  + G GGGL+ +P         G       H+A+GT+      ++
Sbjct: 8   FLILAVFCFIAAVVDAISG-GGGLISLPAYFAV----GFPP----HIALGTNKLSAFLST 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S  +  +   +N +I+           V+       +D  +         +L+ +  L
Sbjct: 59  FASAFKFWKAKKVNAEIVSKLFVFSLAGAVLGVKTAVSIDSKYFKPISFGILILVFLYAL 118

Query: 143 KRDRLYCERKFPDNYVKYIW-----GMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
           K   L  +  +     K I          GF  G LG G   F    ++  +      A+
Sbjct: 119 KNKSLGEKNYYKGTTPKTIILGKIMAFCLGFYDGFLGPGTAAFLMFCLIKIFKLDFSSAS 178

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++    F +L+V  +            LG +N    L I  +      + +KL+ 
Sbjct: 179 GNTKILNLSSNFASLVVFAF------------LGKLNWVYGLSIAVVMTFGAIIGSKLAI 226

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
           + G K++   F ++        +
Sbjct: 227 LKGNKFIKPVFLVVTIVLILKMS 249


>gi|237654728|ref|YP_002891042.1| hypothetical protein Tmz1t_4088 [Thauera sp. MZ1T]
 gi|237625975|gb|ACR02665.1| protein of unknown function DUF81 [Thauera sp. MZ1T]
          Length = 256

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 75/200 (37%), Gaps = 13/200 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              ++ VA+  +G +  + G GGGL+ +P L  AF       +       GT+       
Sbjct: 6   LFLVLGVAALFAGFVDSIVG-GGGLIQLPALFAAF------PTTAPATLFGTNKLASIVG 58

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  + +++ R   I  ++         + +   +  ++++D + L        +L+ +  
Sbjct: 59  TTSAAVQYSRRVEIPWRVAAPGALAALVGSWYGAKAVAYLDPAILRPLILALLVLVAVYT 118

Query: 142 LKRDRLYCERKFPDNYVKYIW-----GMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
             R  L      P++  + +      G V GF  G  G G G     L +   G    +A
Sbjct: 119 FLRKDLGAVSSEPEHGARSVAIGLGVGGVIGFYDGFFGPGTGSFLIFLFIRLLGMDFLRA 178

Query: 196 TATSAGVSALIAFPALLVRI 215
           + ++  V+      A+   +
Sbjct: 179 SVSAKIVNVATNLAAISFFV 198


>gi|254489709|ref|ZP_05102905.1| conserved domain protein, putative [Methylophaga thiooxidans
           DMS010]
 gi|224465118|gb|EEF81371.1| conserved domain protein, putative [Methylophaga thiooxydans
           DMS010]
          Length = 251

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 97/259 (37%), Gaps = 25/259 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ + S ++ T S   G G GL+  PVL       G+        A+ T         + 
Sbjct: 8   ILFLVSLVANTFSAFSGGGAGLIQFPVLIFLGLTFGV--------ALATHKVASVALGIG 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + + + R   +  + +   +       V+   +I  V   +   A  +    +GI  + +
Sbjct: 60  AVLRYFRTSRLERQFVWLMLLAGVPGVVLGGSVILLVPDRWAEIALGLLTGGLGIYSMLK 119

Query: 145 DRL-----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATAT 198
            +L        R     Y+  +     GFL+G+L  G G+F  + + L++G    +A A 
Sbjct: 120 AQLGQSYDPINRSRRGFYIGGLVLFFLGFLNGSLTSGTGLFVTIWLVLWFGMDYQRAVAY 179

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  +         +   ++G G   L    LG +    +  +L  S++   L   L+   
Sbjct: 180 TLTM---------VGLFWNGSGAITL--GILGDIRWDWLPALLLGSLIGGYLGAHLALKH 228

Query: 259 GKKYLTIGFSMIMFTTSFV 277
           G +++   F ++    S  
Sbjct: 229 GNRWIKRAFEVVTLLISVK 247


>gi|144898428|emb|CAM75292.1| Protein of unknown function DUF81 [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 267

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 69/186 (37%), Gaps = 12/186 (6%)

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN 156
             ++ + +    +   + +   + +  + L +  A+  + M  ++     L   +   + 
Sbjct: 84  WAVIVNLLAGSLVGAWLGAGWATRLKSTTLYRIIALLLVAMAFILWLGHDLGPSQGGLNG 143

Query: 157 YVKYIWGMV----TGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
           +  Y  G V     G ++  +GV GG +    L+L +G  I  A + S  VS        
Sbjct: 144 WPLYGAGAVAGLGIGVVASLMGVAGGELLIPTLILLFGVDIKLAGSLSLVVSLPTMIVGF 203

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
                S      +   + GFV     LI+   SIL + +  +L   +    L    ++I+
Sbjct: 204 ARYSRS--QSFAVLGRNRGFV-----LIMAAGSILGSFIGGQLLGTVPNAVLLPALAIIL 256

Query: 272 FTTSFV 277
             ++  
Sbjct: 257 IVSAVK 262



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 12/122 (9%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            VA    G ++ L GV GG +++P L   F        + + +A   SL V  PT ++ F
Sbjct: 151 AVAGLGIGVVASLMGVAGGELLIPTLILLF-------GVDIKLAGSLSLVVSLPTMIVGF 203

Query: 87  MEHRRHGTI-----NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             + R  +      N   +        + + +   ++  V  + L  A AI  ++  + +
Sbjct: 204 ARYSRSQSFAVLGRNRGFVLIMAAGSILGSFIGGQLLGTVPNAVLLPALAIILIVSAVKV 263

Query: 142 LK 143
            +
Sbjct: 264 WR 265


>gi|21233578|ref|NP_639495.1| hypothetical protein XCC4161 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66770544|ref|YP_245306.1| hypothetical protein XC_4248 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188993770|ref|YP_001905780.1| hypothetical protein xccb100_4375 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21115441|gb|AAM43377.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575876|gb|AAY51286.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167735530|emb|CAP53745.1| Putative membrane protein [Xanthomonas campestris pv. campestris]
          Length = 271

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 69/202 (34%), Gaps = 13/202 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++  +F++G +    G GGGL+ +P L                + +GT+       +
Sbjct: 23  LPWLLCIAFVAGLVDAAVG-GGGLIQLPGLFATLPQQ------APSLILGTNKFSAMFGT 75

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   + R+     + +          + + +  +S + K  +     +  + M    L
Sbjct: 76  GASAWRYARNVRFPWRPVLYATAAAFTFSFLGATAVSLLPKQAVRPLILVLLIAMLGYTL 135

Query: 143 KRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +       +      +        G   GF  G  G G G     L + F+G    +A+
Sbjct: 136 IKKDFGALHRPRAIGRRELVTALAMGAAIGFYDGFFGPGTGSFLIFLFIRFFGLDFLRAS 195

Query: 197 ATSAGVSALIAFPALLVRIYSG 218
           A +  V+      AL   + +G
Sbjct: 196 AAAKVVNLATNLAALSFFLPTG 217


>gi|313673484|ref|YP_004051595.1| hypothetical protein Calni_1524 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940240|gb|ADR19432.1| protein of unknown function DUF81 [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 263

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 68/187 (36%), Gaps = 14/187 (7%)

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE------RK 152
           I  + +    I + V     + V+++ L K  AIF + + +++   D +Y        + 
Sbjct: 77  IALNILMGSLIGSYVGVHFATSVNQALLKKIVAIFLIFVALILFFHDLVYENGYILNLQN 136

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
                + ++ G+  G  S  LGV GG      +LF Y   I  A + S  +S       +
Sbjct: 137 IVRIPLGFVLGVFIGVFSSMLGVAGGELIIPTLLFIYNVDIKIAGSVSLMISLPTIIMGI 196

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
                 G+        +        + +++  SIL + L +          L +   +++
Sbjct: 197 YKYNKKGFSKVISEEKNF-------IFLMVIGSILGSLLGSFFLKQFSSHGLRVMLGVVL 249

Query: 272 FTTSFVF 278
             +S   
Sbjct: 250 TISSLKM 256



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 49/131 (37%), Gaps = 12/131 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L  V     G  S + GV GG +++P L   +       ++ + +A   SL +  PT 
Sbjct: 140 IPLGFVLGVFIGVFSSMLGVAGGELIIPTLLFIY-------NVDIKIAGSVSLMISLPTI 192

Query: 83  VMSFMEHRRHG-----TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +M   ++ + G     +     +   +    + +++ S  +       L     +   + 
Sbjct: 193 IMGIYKYNKKGFSKVISEEKNFIFLMVIGSILGSLLGSFFLKQFSSHGLRVMLGVVLTIS 252

Query: 138 GILMLKRDRLY 148
            + ML  ++  
Sbjct: 253 SLKMLYINKKN 263


>gi|154244771|ref|YP_001415729.1| recombinase [Xanthobacter autotrophicus Py2]
 gi|154158856|gb|ABS66072.1| Recombinase [Xanthobacter autotrophicus Py2]
          Length = 662

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 12/99 (12%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF-- 86
           + F  G  + L GV GG +++P L   F L        + +A   SL +  PT +  F  
Sbjct: 543 SGFAIGIFASLLGVAGGELLIPTLVVLFGLD-------IKLAGSLSLAISLPTMIAGFAR 595

Query: 87  MEHRRHGTI---NMKILKDWIFVLPITTVVTSLMISHVD 122
               R   +   N + +          T++   ++  V 
Sbjct: 596 YSQDRSFAVLGRNRRFVVVMSAGSVAGTLIGGQLLGLVP 634



 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 28/84 (33%), Gaps = 5/84 (5%)

Query: 136 LMGILMLKRDRLYCERKFPDNYVKYIWG----MVTGFLSGALGVGGG-IFTNLLMLFYGA 190
           L GIL +               VK + G       G  +  LGV GG +    L++ +G 
Sbjct: 513 LAGILTISTQSKNPAAGATGAQVKMVAGAGSGFAIGIFASLLGVAGGELLIPTLVVLFGL 572

Query: 191 SIYKATATSAGVSALIAFPALLVR 214
            I  A + S  +S           
Sbjct: 573 DIKLAGSLSLAISLPTMIAGFARY 596


>gi|330980308|gb|EGH78441.1| hypothetical protein PSYAP_17468 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 248

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 84/229 (36%), Gaps = 16/229 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++     I    I   +T
Sbjct: 29  AIPALGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALMLIIPSFIFAWLT 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGI----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           SL+   VD   +  AF  F +++ +     M  R +        + ++  + G       
Sbjct: 89  SLLAVRVDPQGMRLAFVGFLVVLTVFNVAQMYWRSKQAAGGLRHEKWLWLLGGGSGVTGG 148

Query: 171 GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
                GG + T +L   +GA+   A   +  ++A      L+                  
Sbjct: 149 LFGVGGGVVATPILTSVFGATQVVAQGLALSLAAPSTGITLVTYALHD------------ 196

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            VN    + +    +       KL++ + ++ L + F + +   + + A
Sbjct: 197 HVNWAMGIPLAIGGLASISWGVKLAHSLPERTLRLMFCVFLVLCAVILA 245


>gi|330809332|ref|YP_004353794.1| membrane protein [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327377440|gb|AEA68790.1| Conserved hypothetical protein; membrane protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 267

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 43/120 (35%), Gaps = 15/120 (12%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            + G   G +    G GGGI     ++F             GV   +A    +  +  G 
Sbjct: 5   LVLGFTVGVILALTGAGGGILAVPFLVF-------------GVGLSMAEAGPIGLLAVGL 51

Query: 220 GLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    L  G V   A L+     ++ +PL   L+     + LTI F++++   +F 
Sbjct: 52  AATLGAVMGLRNGIVRYKAALVTASAGVICSPLGLWLAQRTPNRPLTILFALLLMYVAFR 111



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 94/277 (33%), Gaps = 43/277 (15%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++V  F  G +  L G GGG++ VP L     L   +      +A+G +       +
Sbjct: 1   MITVLVLGFTVGVILALTGAGGGILAVPFLVFGVGLSMAEAGPIGLLAVGLA-------A 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +   R+G +  K          I + +   +        L   FA+  + +    L
Sbjct: 54  TLGAVMGLRNGIVRYKAALVTASAGVICSPLGLWLAQRTPNRPLTILFALLLMYVAFRAL 113

Query: 143 KRDRLYCERKF-----------------------PDNYVKYIWGMVTGFLSGALGVGGGI 179
           ++      R                         P  +     GMV G LSG LGVGGG 
Sbjct: 114 QKSLPSHVRAKASETRKPPPCVLDENRGKLNWTGPCAWALTASGMVAGVLSGLLGVGGGF 173

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
                +  Y   +     ATS  V AL++   +L               ++G +     L
Sbjct: 174 VMVPALQRYTNLTTQSVLATSLTVIALVSMSGVLA------------SSAMGHLQWPIAL 221

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                +I+       ++  + + YL  GF+++    +
Sbjct: 222 PFSMGAIVGMLGGRLVAARLPEPYLQRGFALVSTLVA 258



 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 35/81 (43%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           ++     + TSL VIA  S+   +     G +   I   +     +  +   L+ + + +
Sbjct: 184 NLTTQSVLATSLTVIALVSMSGVLASSAMGHLQWPIALPFSMGAIVGMLGGRLVAARLPE 243

Query: 124 SFLNKAFAIFCLLMGILMLKR 144
            +L + FA+   L+ + +L +
Sbjct: 244 PYLQRGFALVSTLVAVALLVK 264


>gi|62317346|ref|YP_223199.1| hypothetical protein BruAb2_0409 [Brucella abortus bv. 1 str.
           9-941]
 gi|83269324|ref|YP_418615.1| hypothetical protein BAB2_0412 [Brucella melitensis biovar Abortus
           2308]
 gi|254690842|ref|ZP_05154096.1| hypothetical protein Babob68_11930 [Brucella abortus bv. 6 str.
           870]
 gi|254695848|ref|ZP_05157676.1| hypothetical protein Babob3T_14725 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254732071|ref|ZP_05190649.1| hypothetical protein Babob42_13036 [Brucella abortus bv. 4 str.
           292]
 gi|256256026|ref|ZP_05461562.1| hypothetical protein Babob9C_01383 [Brucella abortus bv. 9 str.
           C68]
 gi|297249384|ref|ZP_06933085.1| hypothetical protein BAYG_02132 [Brucella abortus bv. 5 str. B3196]
 gi|62197539|gb|AAX75838.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941]
 gi|82939598|emb|CAJ12578.1| Protein of unknown function DUF81 [Brucella melitensis biovar
           Abortus 2308]
 gi|297173253|gb|EFH32617.1| hypothetical protein BAYG_02132 [Brucella abortus bv. 5 str. B3196]
          Length = 316

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 89/273 (32%), Gaps = 56/273 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G LSGLFGVGGG ++ P+L           +I   +A+ T    +  +S
Sbjct: 24  MLVLLGMGAAVGFLSGLFGVGGGFLITPLLIFY--------NIPPAIAVATGANQVIASS 75

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
           V   + H +  T+++K+    +    + +++   + S +         ++  +  F   +
Sbjct: 76  VSGALAHFKRRTLDIKLGLFLVAGGILGSLIGIFVFSWLRDLGQLDLIVSILYVFFLGTI 135

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R      +         G   
Sbjct: 136 GGLMLVESVQALRRAKKGQGGAVRRSGQHTWIHRLPFKMRFRASTIYVSVIPVLGIGFFI 195

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G LS  +GVGGG      +++           TS      +     +++  +        
Sbjct: 196 GLLSSVMGVGGGFIMVPALIYLLHVPTNVVVGTSLFQITFVTAFTTVMQATTNQS----- 250

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 ++I    +++   ++      +    +
Sbjct: 251 ------IDIVLAFLLMVGGVIGAQYGARAGRKL 277


>gi|262274570|ref|ZP_06052381.1| hypothetical protein VHA_001547 [Grimontia hollisae CIP 101886]
 gi|262221133|gb|EEY72447.1| hypothetical protein VHA_001547 [Grimontia hollisae CIP 101886]
          Length = 252

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 94/270 (34%), Gaps = 29/270 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  +++  L+++  F++G ++ L G GG  + +P L            +   VA  T+  
Sbjct: 2   DVSIEFGALLVILGFVAGIINTLAG-GGSNLTIPALIVL--------GMPAEVANATNRV 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   SV      R H  ++   L   +    +   V +   + +  S +        LL
Sbjct: 53  GVFMQSVSGVAGFRHHKRLDNTDLLPILIPTLVGGAVGATSAAWLPSSIIKPLLLGTMLL 112

Query: 137 MGILMLKRDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
           M  +ML + +        C RK  +    +I   + GF  G +  G G +    L     
Sbjct: 113 MAFIMLVKPQAVMPHEGECARKVSETPSSWIGLGIAGFYGGFVQAGVGFVLIAALCGTLR 172

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             + +  A     +      +L + I+    L                L++   +++   
Sbjct: 173 YDLVRGNALKLVCTLAFTTVSLAIFIWQDLILWLP------------GLLLAVGAMVGAW 220

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           +A K +     K L   F  +M     VFA
Sbjct: 221 IAVKFAIKADPKLLK-WFLFLMTLVGVVFA 249


>gi|293610745|ref|ZP_06693045.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827089|gb|EFF85454.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 256

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 93/256 (36%), Gaps = 25/256 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D I  +I  +F +G +    G GGGL+ +P +   F       ++     +GT+      
Sbjct: 4   DVILSLIFFAFTAGAIDAAVG-GGGLIQIPGIMSTF------PNMSTATVIGTNKVSSIF 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     +   +  K+L        I++   +  +S + +S L     +  +++ I 
Sbjct: 57  GTASAAYTFAKKVKLQWKLLAVIAICALISSFAGAACLSLIPQSVLRPFVFVMLIVIAIY 116

Query: 141 MLKRDRL----YCERKFPDNYVKYIWGMV-TGFLSGALGVG-GGIFTNLLMLFYGASIYK 194
            L +         ++      +    G +  GF  G  G G G  F    + F       
Sbjct: 117 TLVKKNFGQVHTEQKITTKMLILAGIGSLAIGFYDGIFGPGTGSFFIFFFIRFLQVDFLH 176

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A S   + +    AL   I +G  +            +   L++   ++L + +  + 
Sbjct: 177 ASALSKIGNFMTNLAALSFLIPTGHAI------------LHIGLMMAAANVLGSIVGVRT 224

Query: 255 SYMIGKKYLTIGFSMI 270
           +   G  ++ I F ++
Sbjct: 225 ALKYGSGFVRIIFLIL 240


>gi|300690709|ref|YP_003751704.1| hypothetical protein RPSI07_1048 [Ralstonia solanacearum PSI07]
 gi|299077769|emb|CBJ50407.1| conserved membrane protein of unknown function, DUF81 [Ralstonia
           solanacearum PSI07]
          Length = 272

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 83/246 (33%), Gaps = 34/246 (13%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L+  F   G   +     A+GT L   + T  +  + HR HG I   I+K      
Sbjct: 42  MTPLLTLMF---GFSPAT----AVGTDLAFASLTKGVGTIAHRSHGHIRWDIVKRLCLGS 94

Query: 108 PITTVVTSLM---ISHVDKSFL---NKAFAIFCLLMGILMLKRDRL------YCERKFPD 155
               +VT L+     H+D  ++        +  +L  I +L R R+          +   
Sbjct: 95  VPAALVTVLVLKTAGHLDARWMHFIRLTIGVSVILTVISLLFRHRVLDWLARNPRYRLQG 154

Query: 156 NYVKYIWGMVTGFLSGAL---GVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL- 211
           + +      +   L   +    +G G     L+L     +  A                 
Sbjct: 155 STLAMATVFIGVVLGVLVTVSSIGAGAVGATLILILYPELKSA-----------EVAGTD 203

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +        + GL    LG ++   ++ +L  SI    L  +LS  + ++      +  +
Sbjct: 204 IAYAVPLTAVAGLGHMYLGTIDWNLLVSLLVGSIPGIWLGARLSKNLPERLTRGALAATL 263

Query: 272 FTTSFV 277
             T+  
Sbjct: 264 TVTAIK 269


>gi|296132843|ref|YP_003640090.1| protein of unknown function DUF81 [Thermincola sp. JR]
 gi|296031421|gb|ADG82189.1| protein of unknown function DUF81 [Thermincola potens JR]
          Length = 119

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 42/79 (53%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            +  H A GTSL +I PT+++S   +R +G++++ +         I   + + +++++  
Sbjct: 40  GVSQHKAHGTSLAIILPTALVSSFVYRINGSMDIYLALQVAIGGMIGGYLGARLMNYIPA 99

Query: 124 SFLNKAFAIFCLLMGILML 142
           + L K F  F L  GI M+
Sbjct: 100 ASLKKIFGAFILAAGIRMV 118


>gi|291007209|ref|ZP_06565182.1| hypothetical protein SeryN2_22032 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 264

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 95/258 (36%), Gaps = 25/258 (9%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            D  +  +  +  A+FL+G +  + G GGGL+ +P +              +  ++ TS 
Sbjct: 7   ADLSLAGLLFLCAAAFLAGAVDAIVG-GGGLIQLPAMLLLV------PGGEVIYSLATSK 59

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  +   + R   I+ +       V  + ++  ++    +  S LN    +  +
Sbjct: 60  IAAVAGTTAAAHTYARKTPIDWRSALPMALVALLGSLGGAMFADALPSSVLNVVVLVALV 119

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYG 189
           L+GI   ++  L               V    G + GF  G  G G G F   L++   G
Sbjct: 120 LVGIYTWRKPELGTAHAPRFQARTQVLVMIAGGALIGFWDGIAGPGTGSFLVFLLVGLVG 179

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
            +   A+AT+  V+      AL+  I +G             V  G  +++   +I  + 
Sbjct: 180 FAFVTASATAKIVNVATNVGALVFFIPAGK------------VLWGLGVLMAVSNITGSV 227

Query: 250 LATKLSYMIGKKYLTIGF 267
           L   ++   G  ++   F
Sbjct: 228 LGALVASRRGSAFVRRVF 245


>gi|78066514|ref|YP_369283.1| hypothetical protein Bcep18194_A5045 [Burkholderia sp. 383]
 gi|77967259|gb|ABB08639.1| protein of unknown function DUF81 [Burkholderia sp. 383]
          Length = 268

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/276 (18%), Positives = 97/276 (35%), Gaps = 40/276 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V     G + GL G GGG++ VP L        +  S  M  A   +L  +A ++
Sbjct: 1   MLISLVLGGFVGAVLGLTGAGGGILAVPALV-------VGMSWPMQQATPVALVAVAGSA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +E  R G +  +            T +   +   + +  L   FA+  L++   +L
Sbjct: 54  ALGALEGFRRGLVRYRAALLMAVAGVPLTTLGVRLAHVLPQRLLLALFALTMLVVAGRLL 113

Query: 143 K---------------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
                                  D       +P        G +TG ++G LGVGGG   
Sbjct: 114 LQALRHAPVDAEASPLCVGRVNPDTGRLVWSWPVGVALASTGAMTGLMTGLLGVGGGFVI 173

Query: 182 NLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             ++  +   S++   ATS  V AL+    +   + SG               +   L  
Sbjct: 174 VPMLRKFTNVSMHGVVATSLMVIALVGTGGVFATLVSGTRAP-----------LDVTLWF 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              + L        S+ +  +++  GF+ ++   + 
Sbjct: 223 TVATALGMAAGRGASHHLAARHVQAGFAAVLVCVAL 258



 Score = 43.9 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G   G + G  G GGGI     L++     + +A          +A  A+    
Sbjct: 2   LISLVLGGFVGAVLGLTGAGGGILAVPALVVGMSWPMQQA--------TPVALVAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +  G V   A L++    + +T L  +L++++ ++ L   F++ M   +
Sbjct: 54  ALG----ALEGFRRGLVRYRAALLMAVAGVPLTTLGVRLAHVLPQRLLLALFALTMLVVA 109

Query: 276 FV 277
             
Sbjct: 110 GR 111


>gi|228931362|ref|ZP_04094291.1| Permease [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228828365|gb|EEM74071.1| Permease [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 250

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 93/243 (38%), Gaps = 32/243 (13%)

Query: 51  VLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPIT 110
           +L+    ++GI  S    +A+GT L     T +    +H +  TIN +++K        +
Sbjct: 19  LLTPFLLVLGITPS----IAVGTDLVYNTITKMFGISQHWKQKTINFRLVKYLAIGSIPS 74

Query: 111 TVVTSLMISHVD------KSFLNKAFAIFCLLMGILMLKR--------DRLYCERKFPDN 156
            V+    I  +       +  +        ++  I +  +          ++ ++     
Sbjct: 75  AVIAIATIQFLPIFHQNREGTIKYIIGYVLIVAAISIFIKIFFYDESIPNVFQKKTLEQK 134

Query: 157 YVKYIW-GMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVR 214
               I+ G + GF+ G   VG G    ++M++ Y     +   T    + L+   A ++ 
Sbjct: 135 KNLTIFIGGILGFIVGLTSVGSGSLFAIVMIYLYQLKPPELVGTDIAHAFLLVAVASIIN 194

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           I            +LG V+   V+ +L  SI    + +KLS  I  K L I  ++I+  +
Sbjct: 195 I------------NLGNVDYNLVINLLIGSIPGVIIGSKLSTKIPIKPLQILLAIIICIS 242

Query: 275 SFV 277
              
Sbjct: 243 GLK 245



 Score = 37.7 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 46/118 (38%), Gaps = 7/118 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I    + G + GL  VG G +   V+   +QL   +        +GT +        +
Sbjct: 137 LTIFIGGILGFIVGLTSVGSGSLFAIVMIYLYQLKPPEL-------VGTDIAHAFLLVAV 189

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + +   G ++  ++ + +       ++ S + + +    L    AI   + G+ ++
Sbjct: 190 ASIININLGNVDYNLVINLLIGSIPGVIIGSKLSTKIPIKPLQILLAIIICISGLKLI 247


>gi|326577026|gb|EGE26921.1| hypothetical protein E9Y_00806 [Moraxella catarrhalis 101P30B1]
          Length = 254

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 13/203 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D +  +++ S ++G +  + G GGGL+ +PVL  A              A+  +    A
Sbjct: 8   IDIVVFLLIGSCIAGFIDAICG-GGGLISIPVLLTA--------GFSPAQAIAANKLQGA 58

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ S   +   G ++ K+L   +    I   + +  +S +  + L K      + M +
Sbjct: 59  VGAIASTQYYLNKGVLDKKLLITLLPPAIIGGAIGTATLSLLPSTLLEKILPFLLIAMAL 118

Query: 140 LMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
                  L     + K       +    V  F  G  G G G F  L +    G +  KA
Sbjct: 119 YFYFSKNLSDTTKKAKMGVFLFSWTIIPVIAFYDGFFGAGAGTFYLLAVTSLLGFAATKA 178

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
            A S  ++      +LLV IY G
Sbjct: 179 MAYSRVLNLASNLISLLVFIYLG 201


>gi|11497741|ref|NP_068963.1| hypothetical protein AF0124 [Archaeoglobus fulgidus DSM 4304]
 gi|2650525|gb|AAB91108.1| conserved hypothetical transmembrane protein [Archaeoglobus
           fulgidus DSM 4304]
          Length = 289

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 48/125 (38%), Gaps = 7/125 (5%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +  +  +   + A    G ++G+FG+G G   VPVL+             + VA+ TS+
Sbjct: 160 IEYRLTRLPYSLPAFAGVGLVAGMFGLGAGWANVPVLNLLMGA-------PLRVAVSTSM 212

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            +I      +   +   G +   I+   +F + +   + +++   V    +        L
Sbjct: 213 LIITLNDAAAMWVYIARGAVLPLIVVPSVFGVTLGARIGAMIAEKVRPRVIRLVVLGIML 272

Query: 136 LMGIL 140
              IL
Sbjct: 273 FAAIL 277



 Score = 43.9 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 100/292 (34%), Gaps = 54/292 (18%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V ++ L+   +FL G ++ + GVGGG++ VP+ +  F          +    G  L +  
Sbjct: 4   VMWMVLLFAFTFLIGIIAPISGVGGGVLFVPLTTAFFPFN-------IDFVRGAGLAIAL 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIF 133
            +++ S       G  N++       V   +++  S++   +       K ++  A  I 
Sbjct: 57  TSALSSSPRLLEKGLANLRASIVIATVSIASSIAGSVLGLWITNEMPEGKHYITIALGIS 116

Query: 134 CLLMGILMLKRDRLY----------------------------CERKFPDNYVKYIWGMV 165
              +  +M+K  R+                              E +             
Sbjct: 117 LFFIFAVMVKSKRVEFPEVDSVDSISAKLDLSGRWYEPSRDEVIEYRLTRLPYSLPAFAG 176

Query: 166 TGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            G ++G  G+G G     ++ L  GA +  A +TS  +  L    A+ V I  G  L   
Sbjct: 177 VGLVAGMFGLGAGWANVPVLNLLMGAPLRVAVSTSMLIITLNDAAAMWVYIARGAVLP-- 234

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                  + + +V  +     L   +   ++  +  + + +    IM   + 
Sbjct: 235 ------LIVVPSVFGVT----LGARIGAMIAEKVRPRVIRLVVLGIMLFAAI 276


>gi|113868955|ref|YP_727444.1| permease [Ralstonia eutropha H16]
 gi|113527731|emb|CAJ94076.1| predicted permease [Ralstonia eutropha H16]
          Length = 257

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 81/248 (32%), Gaps = 36/248 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L+  F   G   +     A+GT L   A T     + HR HG +  ++++     
Sbjct: 26  LMTPLLTLLF---GFSPAT----AVGTDLAFAAITKGFGTIAHRAHGHVQWQVVRRLCIG 78

Query: 107 LPITTVVTSLM---ISHVDKSFLNKAFAIFCLLMGI---------LMLKRDRLYCERKFP 154
                V   L+      ++  +L+       + + +          ML         +  
Sbjct: 79  SLPAAVAAILVLKSAGELNAQWLHAIRLTIGVSVLLTVLSLLFRKQMLAWLERNPRFQLH 138

Query: 155 DNY---VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA--TATSAGVSALIAFP 209
                    + G V G L     +G G     L+L     +  A    T    +  +   
Sbjct: 139 GRAQVIATIVVGAVIGVLVTVSSIGAGAVGATLILLLYPHMKPAEVAGTDIAYAVPLTAL 198

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           A L  ++            LG V+   +L +L  SI    L  +LS  + ++ +    + 
Sbjct: 199 AGLGHVW------------LGTVDWNLLLALLVGSIPGIWLGAQLSRALPERLVRAALAT 246

Query: 270 IMFTTSFV 277
            +   +  
Sbjct: 247 TLTLVAIK 254



 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 45/120 (37%), Gaps = 6/120 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +   IV   + G L  +  +G G V   ++   +  M   +        GT +    P +
Sbjct: 143 VIATIVVGAVIGVLVTVSSIGAGAVGATLILLLYPHMKPAEVA------GTDIAYAVPLT 196

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++ + H   GT++  +L   +        + + +   + +  +  A A    L+ I ++
Sbjct: 197 ALAGLGHVWLGTVDWNLLLALLVGSIPGIWLGAQLSRALPERLVRAALATTLTLVAIKLV 256


>gi|332308803|ref|YP_004436653.1| protein of unknown function DUF81 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332176132|gb|AEE25385.1| protein of unknown function DUF81 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 269

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + LI   + + G ++G+ G GGG +++P L            + M  A+  SL +IA  S
Sbjct: 151 VLLIAFWAAVVGIITGILGAGGGFIIIPALVFLM-------GMSMKQAVAASLFIIALNS 203

Query: 83  VMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +  F+   + G  ++ ++L   +    I   ++S +   +D   L K
Sbjct: 204 LFGFVGDLQAGIELDFQLLGLMLIATFIGISISSKIAGKLDGQTLQK 250



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 74/194 (38%), Gaps = 31/194 (15%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L           S+    A G SL ++  T+    + + + G I++K    +     
Sbjct: 28  VPILVYLM-------SVPAVTATGYSLLIVGATAAYGAITYFKQGVIDVKASVLFAIPSL 80

Query: 109 IT-----TVVTSLMISHVDKSFLNK--------AFAIFCLLMGILMLKRDRLYCERKFPD 155
           I+     T + S +  ++    L+          FA+  L+   +ML++           
Sbjct: 81  ISVYYTRTYLMSAIPENISLGALSINKNVAIMVFFALLMLMSATMMLRKAYKKVPAATSS 140

Query: 156 N----------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSA 204
           +           +   W  V G ++G LG GGG      ++F  G S+ +A A S  + A
Sbjct: 141 STPDNASSHNVLLIAFWAAVVGIITGILGAGGGFIIIPALVFLMGMSMKQAVAASLFIIA 200

Query: 205 LIAFPALLVRIYSG 218
           L +    +  + +G
Sbjct: 201 LNSLFGFVGDLQAG 214


>gi|215482106|ref|YP_002324288.1| hypothetical protein ABBFA_000355 [Acinetobacter baumannii
           AB307-0294]
 gi|239501929|ref|ZP_04661239.1| hypothetical protein AbauAB_06410 [Acinetobacter baumannii AB900]
 gi|260556952|ref|ZP_05829169.1| permease [Acinetobacter baumannii ATCC 19606]
 gi|301344861|ref|ZP_07225602.1| hypothetical protein AbauAB0_01430 [Acinetobacter baumannii AB056]
 gi|301511140|ref|ZP_07236377.1| hypothetical protein AbauAB05_06158 [Acinetobacter baumannii AB058]
 gi|301596529|ref|ZP_07241537.1| hypothetical protein AbauAB059_11962 [Acinetobacter baumannii
           AB059]
 gi|332851318|ref|ZP_08433370.1| hypothetical protein HMPREF0021_00941 [Acinetobacter baumannii
           6013150]
 gi|332868729|ref|ZP_08438352.1| hypothetical protein HMPREF0020_01989 [Acinetobacter baumannii
           6013113]
 gi|213986539|gb|ACJ56838.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
 gi|260409558|gb|EEX02859.1| permease [Acinetobacter baumannii ATCC 19606]
 gi|332730034|gb|EGJ61362.1| hypothetical protein HMPREF0021_00941 [Acinetobacter baumannii
           6013150]
 gi|332733158|gb|EGJ64355.1| hypothetical protein HMPREF0020_01989 [Acinetobacter baumannii
           6013113]
          Length = 258

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 93/256 (36%), Gaps = 25/256 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D I  +I  +F +G +    G GGGL+ +P +   F       ++     +GT+      
Sbjct: 6   DVILSLIFFAFTAGAIDAAVG-GGGLIQIPGIMSTF------PNMSTATVIGTNKVSSIF 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     +   +  K+L        I++   +  +S + +S L     +  +++ I 
Sbjct: 59  GTASAAYTFAKKVKLQWKLLAVIAICALISSFAGAACLSLIPQSVLRPFVFVMLIVIAIY 118

Query: 141 MLKRDRLYC--ERKFPDNYVKYIWGMV---TGFLSGALGVG-GGIFTNLLMLFYGASIYK 194
            L +         +     +  + G+     GF  G  G G G  F    + F       
Sbjct: 119 TLVKKNFGQVHTEQKITTKMLVLAGIGSLAIGFYDGIFGPGTGSFFIFFFIRFLQVDFLH 178

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A S   + +    AL   I +G  +            +   L++   ++L + +  + 
Sbjct: 179 ASALSKIGNFMTNLAALSFLIPTGHAI------------LHIGLMMAAANVLGSIVGVRT 226

Query: 255 SYMIGKKYLTIGFSMI 270
           +   G  ++ I F ++
Sbjct: 227 ALKYGSGFVRIIFLIL 242


>gi|150025861|ref|YP_001296687.1| hypothetical protein FP1816 [Flavobacterium psychrophilum JIP02/86]
 gi|149772402|emb|CAL43882.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
          Length = 261

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 87/242 (35%), Gaps = 33/242 (13%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           +P+L   F+       I    A   SL ++  T+ +   +H   G + +K    + F   
Sbjct: 28  IPILVYLFK-------INPENATSYSLFIVGITAGIGSYKHYLLGNLKIKSALYFAFPSV 80

Query: 109 ITTVVTSLMI--------------SHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
           ++ +    +I                   S +   FAI  +   I M+K+     + +  
Sbjct: 81  LSLLFVRKIILPNIPNHLFVVNNFEVTKNSLIMIVFAILMIFASISMIKKSNSNKKTEGI 140

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                   G++ GF++G LG GGG      ++F+    + +A  TS  +  + +      
Sbjct: 141 GFVQLSFIGLIVGFVTGFLGAGGGFLIIPALVFFASLEMKQAIGTSLFIIFINSMIGFGG 200

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            I +G             V+   +LII  I+IL   + T LS  I    L   F   +  
Sbjct: 201 DIINGIE-----------VDYKLLLIISSIAILGMFIGTHLSKKIDGAKLKPAFGWFVLV 249

Query: 274 TS 275
             
Sbjct: 250 MG 251



 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 8/121 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +     + G ++G  G GGG +++P L           S+ M  A+GTSL +I   S++ 
Sbjct: 145 LSFIGLIVGFVTGFLGAGGGFLIIPALVFF-------ASLEMKQAIGTSLFIIFINSMIG 197

Query: 86  FMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           F     +G  ++ K+L     +  +   + + +   +D + L  AF  F L+MG  ++ +
Sbjct: 198 FGGDIINGIEVDYKLLLIISSIAILGMFIGTHLSKKIDGAKLKPAFGWFVLVMGGYIIYK 257

Query: 145 D 145
           +
Sbjct: 258 E 258


>gi|331012215|gb|EGH92271.1| hypothetical protein PSYTB_21550 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 248

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 84/229 (36%), Gaps = 16/229 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++     I    I   +T
Sbjct: 29  AIPALGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALTLIVPSFIFAWLT 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGI----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           SL+   VD   +   F  F +++ +     M  R          + ++  + G       
Sbjct: 89  SLLAVRVDPQSMRLGFVGFLVVLTVFNVAQMYWRGHQAGSGLRHEKWLWLLGGGSGMTGG 148

Query: 171 GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
                GG + T +L   +G +   A   +  ++A              + L+    WS+G
Sbjct: 149 LFGVGGGVVATPILTSVFGTTQVVAQGLALSLAAP-----STGITLVTYALHDHVNWSMG 203

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                  + +    +       KL++ + ++ L + F + +   + + A
Sbjct: 204 -------IPLAIGGLASISWGVKLAHSLPERTLRLMFCVFLVLCAVILA 245


>gi|126173323|ref|YP_001049472.1| hypothetical protein Sbal_1080 [Shewanella baltica OS155]
 gi|125996528|gb|ABN60603.1| protein of unknown function DUF81 [Shewanella baltica OS155]
          Length = 305

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 93/261 (35%), Gaps = 21/261 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            I         +   G GGG++ +PV S   F       +  M    G + G I   S  
Sbjct: 55  FIFLGITGAIFANSTGAGGGVIFIPVFSSLNFSESQSVATSFMIQCFGMTAGAI---SWS 111

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV---DKSFLNKAFAIFCLLMGILM 141
            + + R               +    +V+       +     S L+ +F+IF +++GI +
Sbjct: 112 LYYKKRHLEDAAWSGFVKAALLAAFFSVLGFWSSQLLQLNSPSSLHTSFSIFSIVLGIAI 171

Query: 142 LKRDR---LYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           +   +          P D     + G   G ++  L VG G    + ++  G     A A
Sbjct: 172 VISSKSSTPITRAIMPVDFLWLALIGYFGGIITAWLSVGVGELVVIYLMLRGLCTKMAIA 231

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T   VSA+  + A  + I+S                   VL   P +++   LA KL+  
Sbjct: 232 TGVIVSAITVWSASPIHIFSTNSHALFEL----------VLFAGPGAVIGGLLARKLALY 281

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +  K L + FS+ +  T  V 
Sbjct: 282 LPVKVLKLFFSIWIILTGSVM 302



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 43/122 (35%), Gaps = 6/122 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              + +  +  G ++    VG G ++V  +    + +       M +A G  +  I   S
Sbjct: 190 FLWLALIGYFGGIITAWLSVGVGELVV--IYLMLRGL----CTKMAIATGVIVSAITVWS 243

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                    +     +++        I  ++   +  ++    L   F+I+ +L G +ML
Sbjct: 244 ASPIHIFSTNSHALFELVLFAGPGAVIGGLLARKLALYLPVKVLKLFFSIWIILTGSVML 303

Query: 143 KR 144
             
Sbjct: 304 AS 305


>gi|284162902|ref|YP_003401525.1| hypothetical protein Arcpr_1808 [Archaeoglobus profundus DSM 5631]
 gi|284012899|gb|ADB58852.1| protein of unknown function DUF81 [Archaeoglobus profundus DSM
           5631]
          Length = 481

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 94/288 (32%), Gaps = 56/288 (19%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++   F  G LSG  G GG  V+ P +                +A+ +++    P ++
Sbjct: 25  LFLLALGFFGGMLSGFIGSGGAFVLTPGMMSI--------GTPGSIAVASNMCHKFPKAM 76

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD--------KSFLNKAFAIFCL 135
           +      + G ++ K+         +   V   +   +           +++ AF I   
Sbjct: 77  VGAWRRYKLGQLDPKLALLMAISAIVGVQVGIQVQYMIAQMLGPTGTSLYVSIAFLIVLP 136

Query: 136 LMGILMLKR-----------------------------DRLYCERKFPDNYVKYIWGMVT 166
            +  + L+                                     +    ++    G +T
Sbjct: 137 TVAAICLRDAIKAKKYGLLDTEPKFAMKLEQKFRVPPMIHFKVAGRTQSLWLTVPTGFMT 196

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           GFL+  + VGG I    ++   GAS   A+AT  G++ ++        I           
Sbjct: 197 GFLAATIAVGGFIGVPSMIYIIGASSTVASATELGIAFVMGATGTFSWI----------- 245

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           + +G V+     +IL  S++   +    +      Y+ +  +++M   
Sbjct: 246 YLMGAVDFRLTALILATSLIGVQIGAVGTTYTRPFYIKLAMAVVMLIV 293


>gi|217034807|ref|ZP_03440197.1| hypothetical protein HP9810_894g1 [Helicobacter pylori 98-10]
 gi|216942661|gb|EEC22233.1| hypothetical protein HP9810_894g1 [Helicobacter pylori 98-10]
          Length = 277

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 76/215 (35%), Gaps = 34/215 (15%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +SV+
Sbjct: 8   ILALVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLMQMLFSSVV 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             + + + G +++K      F   +  ++ S ++  +D   L   F +      I     
Sbjct: 60  GSIINYKKGLLDLKEGSFAAFGGLMGAILGSFILKIIDDKILMVVFVVVVCYTFIKYAFS 119

Query: 145 DRLYCE-------------------RKFP------DNYVKYIWGMVTGFLSGALGVGGGI 179
           +    E                   R  P       + V  + G VTG  S  LG+GGGI
Sbjct: 120 NNKKPEHFEEMHFDLHANNKTPEKKRPLPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGI 179

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                + ++      K            +   ++ 
Sbjct: 180 LMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVIS 214


>gi|323486649|ref|ZP_08091970.1| hypothetical protein HMPREF9474_03721 [Clostridium symbiosum
           WAL-14163]
 gi|323400030|gb|EGA92407.1| hypothetical protein HMPREF9474_03721 [Clostridium symbiosum
           WAL-14163]
          Length = 259

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 76/215 (35%), Gaps = 19/215 (8%)

Query: 14  LSKDCVVDYICLIIV---ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           +  +  +DYI  ++      FL+  +  + G GGGL+ +P     F  M +      H A
Sbjct: 1   MLLEMSMDYITSLLFLCPIMFLASFVDAISG-GGGLLSLPA--YLFTGMPV------HNA 51

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
              +      ++ MS   + ++  I+ K       V    +V+ S ++  +    L+   
Sbjct: 52  YACNKLCCNISTAMSAGRYLKNNLIDKKAAFFVGAVTFCCSVLASKIVLWMPDRALSLML 111

Query: 131 AIFCLLMGILMLKRDRLYCERKF-----PDNYVKYIW-GMVTGFLSGALGVGGGIFTNLL 184
                 + IL+L   +   E              +I+ G+  G   G LG G G    ++
Sbjct: 112 LGSMPFVAILILVNKKYPKEDHSDEVTGNRKIGLWIFTGIAMGAYDGMLGPGSGTLAIII 171

Query: 185 ML-FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
                   + +A+  +            +  + +G
Sbjct: 172 YTKLLKYDLTRASGNAKVAVFSSTLAGTISYLLAG 206


>gi|256825687|ref|YP_003149647.1| permease [Kytococcus sedentarius DSM 20547]
 gi|256689080|gb|ACV06882.1| predicted permease [Kytococcus sedentarius DSM 20547]
          Length = 323

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 91/277 (32%), Gaps = 44/277 (15%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++V SF  G + GL G+GGG +M P L       GI  +     A+   L   A    + 
Sbjct: 12  LLVVSFGIGIVIGLTGMGGGALMTPALIML----GIPPAA----AVSNDLVAAAVNKSVG 63

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGI 139
              H R+G+ ++ I    +            ++S +          L        L+   
Sbjct: 64  AAVHWRNGSPHLGITLWLLIGSVPMAFAGGFIVSALGGHEESGQDVLRLIIGGALLVAAT 123

Query: 140 LMLKRDRLYCERKFP----------------DNYVKYIWGMVTGFLSGALGVGGGIFTN- 182
             + R  L+  R                         I G V G L G   VG G     
Sbjct: 124 TYVLRTYLHFSRTLNLLEQGLTPDTDGHPKARPIPTLIVGAVGGLLVGITSVGSGTLIMV 183

Query: 183 -LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
            LL+L+   S  +   T    +  +   A +    +              V++  ++ +L
Sbjct: 184 CLLLLYPTLSAVRMVGTDLLQAIPLVTAAAISHALTTG------------VDLEILIPLL 231

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                 T L  KL+ M+ +     G ++++  T+   
Sbjct: 232 VSGAPGTYLGAKLTGMVSQSVSRRGIAIVLTVTAAKM 268



 Score = 42.0 bits (98), Expect = 0.090,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 47/116 (40%), Gaps = 6/116 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L G+  VG G +++  L   +  +    ++ M   +GT L    P    + 
Sbjct: 160 LIVGAVGGLLVGITSVGSGTLIMVCLLLLYPTL---SAVRM---VGTDLLQAIPLVTAAA 213

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + H     ++++IL   +      T + + +   V +S   +  AI   +    ML
Sbjct: 214 ISHALTTGVDLEILIPLLVSGAPGTYLGAKLTGMVSQSVSRRGIAIVLTVTAAKML 269


>gi|237809773|ref|YP_002894213.1| hypothetical protein Tola_3038 [Tolumonas auensis DSM 9187]
 gi|237502034|gb|ACQ94627.1| protein of unknown function DUF81 [Tolumonas auensis DSM 9187]
          Length = 259

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 89/249 (35%), Gaps = 37/249 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWI-- 104
           +M P+L   F +  +        A+ T L   + T +++   H + G I+ +I+K     
Sbjct: 27  MMTPILLLFFNVSPV-------TAVATDLWFASITKLVAAKAHHKSGKIDWQIVKHLWSG 79

Query: 105 --FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI------LMLKRDRLYC-----ER 151
              V  IT  +    +     S+L +A     +L  +      L+LKR R        + 
Sbjct: 80  SLPVAIITVALIHFGMKFQKVSWLTEAIGFLIVLTAVGLIFSPLLLKRIRPQAGNTEVQP 139

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---YGASIYKATATSAGVSALIAF 208
           +          G + G       VG G   ++L+++        +   A+    +  +A 
Sbjct: 140 EAIKPKTTVFAGGLLGLCVALTSVGAGALGSVLLMYLYPRRMQPHTLVASDIVHAIPLAL 199

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            A +   ++G             V++  +L +L  S+    + + L+  +  + L    +
Sbjct: 200 VAGIGYAFTGM------------VDVHMLLNLLIGSLPAVVIGSLLATKLSSRLLQTSLA 247

Query: 269 MIMFTTSFV 277
            ++      
Sbjct: 248 FVLLMVGVR 256


>gi|213613099|ref|ZP_03370925.1| hypothetical protein SentesTyp_11674 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 178

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 16/150 (10%)

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE---RKFPDNYVKYIWGMV 165
           + ++  +L++ HV    L +   I  + +G+  L   +L  E   R+        I G  
Sbjct: 1   MGSMSGALLVQHVQADILRQILPILVIFIGLYFLLMPKLGEEDRQRRLYGLPFALIAGGC 60

Query: 166 TGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            GF  G  G   G F  L  +   G ++ K+TA +  ++A      LL+ I  G  +   
Sbjct: 61  VGFYDGFFGPAAGSFYALAFVTLCGYNLAKSTAHAKVLNATSNVGGLLLFIIGGKVI--- 117

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKL 254
             W+ GFV       +L    L   + ++L
Sbjct: 118 --WATGFV-------MLVGQFLGARMGSRL 138


>gi|153006892|ref|YP_001381217.1| hypothetical protein Anae109_4055 [Anaeromyxobacter sp. Fw109-5]
 gi|152030465|gb|ABS28233.1| protein of unknown function DUF81 [Anaeromyxobacter sp. Fw109-5]
          Length = 273

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 77/221 (34%), Gaps = 17/221 (7%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             +  H A GTSL  +  T +     +   G +++            T  + +     + 
Sbjct: 50  AGLRQHQAHGTSLLALVFTGLGGAATYAGQGAVDVAAAASLAVTAIATARLGARHAHALP 109

Query: 123 KSFLNKAFAIFCLLMGILMLKRD----RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG 178
           +  L +AF  F + +  L+L +            F    V  + G  TGFLSG +GVGGG
Sbjct: 110 EWKLKRAFGGFQVAVAALLLAKPYLAGASVPAVGFSKLAVLIVTGGFTGFLSGMMGVGGG 169

Query: 179 IFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
                 M+   G     A  +S                           W LG V    +
Sbjct: 170 SLMVPAMVLLTGFPQVLAQGSSLLAMVPAGLAGA------------HQHWQLGNVVRRLL 217

Query: 238 LIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           + ++P  +L T L + L+  +    L   F+ ++  T   +
Sbjct: 218 VGLVPGILLGTWLGSSLALQLTDVTLRFAFAGVVTYTGVRY 258



 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 7/120 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++IV    +G LSG+ GVGGG +MVP +                +A G+SL  + P  
Sbjct: 147 LAVLIVTGGFTGFLSGMMGVGGGSLMVPAMVLL-------TGFPQVLAQGSSLLAMVPAG 199

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +    +H + G +  ++L   +  + + T + S +   +    L  AFA      G+  L
Sbjct: 200 LAGAHQHWQLGNVVRRLLVGLVPGILLGTWLGSSLALQLTDVTLRFAFAGVVTYTGVRYL 259


>gi|170719727|ref|YP_001747415.1| hypothetical protein PputW619_0541 [Pseudomonas putida W619]
 gi|169757730|gb|ACA71046.1| protein of unknown function DUF81 [Pseudomonas putida W619]
          Length = 261

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 94/253 (37%), Gaps = 28/253 (11%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F++G +  + G GGGL +VP     F L+G+       VA+G    V    ++ +     
Sbjct: 24  FVAGFVDSIAG-GGGLFLVPG----FLLVGMPP----QVALGQEKLVSTLGTLAAIRNFL 74

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL-NKAFAIFCLLMGILMLKRDRLYC 149
            +  +  ++    +    +   + + +I  + +  +     A+    + I +  +DR   
Sbjct: 75  ANSKMVWQVALVGVPFSLLGAYLGAHLIVSISQETVGKIILALIPFGILIFLTPKDRPIE 134

Query: 150 ERKFPDNYVKYIW---GMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSAL 205
           ER+     +  +     +  GF  G  G G G    +         +  ++A S   +  
Sbjct: 135 ERELSARMLYTVVPLTCLAIGFYDGFFGPGTGSMFIIAFHYLLRMDLVSSSANSKTFNFA 194

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
               AL+  I +G             V + A+ ++   +IL   + + L+   G   +  
Sbjct: 195 SNIGALVAFIMAGKV-----------VYLLALPLVAC-NILGNHMGSALALRKGNDVVRK 242

Query: 266 --GFSMIMFTTSF 276
              FSM+   TS 
Sbjct: 243 ALVFSMLCLFTSL 255


>gi|220931734|ref|YP_002508642.1| predicted permease [Halothermothrix orenii H 168]
 gi|219993044|gb|ACL69647.1| predicted permease [Halothermothrix orenii H 168]
          Length = 247

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 103/264 (39%), Gaps = 26/264 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  I +I++A   +G ++ + G GG L+ +P L      MG+  +    VA GT+   I
Sbjct: 1   MLFKIIIILLAGTGAGFINTMAG-GGSLLTLPALIF----MGLPPA----VANGTNRIAI 51

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              ++++ +  ++ G  N+KI           + + + +  ++     NK  A+  + M 
Sbjct: 52  LLQNIVATLNFKQKGYFNLKISLMVAIPAVFGSFIGARIAINLPGKLFNKILALVMITML 111

Query: 139 ILMLKRDRLYCERK----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
           IL+L       ++       +     I     G   G +  G GI     +    G S+ 
Sbjct: 112 ILILWNPGRNVKKHKNSLLNNKITTIIVFFFIGIYGGFIQAGVGILIISTLTIMSGLSLV 171

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +  +    V  L    +L++ I            S   ++  A L++   + L   L + 
Sbjct: 172 RINSIKVFVVGLYTLSSLIIFI------------STNNIDWLAGLLLACGNSLGAYLGSN 219

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           L+   G K +    ++ + + S  
Sbjct: 220 LAIKKGDKPIKFILTIAVISMSIK 243


>gi|312900196|ref|ZP_07759508.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
 gi|311292557|gb|EFQ71113.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
          Length = 237

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 91/240 (37%), Gaps = 24/240 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILK 101
           GGG+++ PVL                +A  +S+ V    S+ S  +  ++G  I  K   
Sbjct: 2   GGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFVM-SISSTYKQYQNGVQIEWKKAA 54

Query: 102 DWIFVLPITTVVTSLMISHV-----DKSFLNKA-FAIFCLLMGILMLKRDRLYCERKFPD 155
              F   +  ++  L+++       ++  +    + I  L + +++L             
Sbjct: 55  SISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYIIMLLTLVLVLLYNQFSNWHLHLNG 114

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVR 214
             +  I G+  G LS  LG+GGG      L+LF+G  I  AT  S               
Sbjct: 115 LSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMDIKSATVYSIITIFFSQLAK---- 170

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                G  GL     GF ++  +  I+P ++    +    S  + ++ +   +S+++F  
Sbjct: 171 ----LGNIGLTTGFAGF-DLTMLWAIIPAALFGGYVGGLFSKKLSQQRVAQIYSLVVFLV 225



 Score = 35.8 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 22/130 (16%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + + ++     G LS   G+GGG + V  L   F        + +  A   S+  I 
Sbjct: 112 LNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFF-------GMDIKSATVYSIITIF 164

Query: 80  PTSVMSFMEHRRHGTI---------NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
            + +       + G I         ++ +L   I        V  L    + +  + + +
Sbjct: 165 FSQLA------KLGNIGLTTGFAGFDLTMLWAIIPAALFGGYVGGLFSKKLSQQRVAQIY 218

Query: 131 AIFCLLMGIL 140
           ++   L+ +L
Sbjct: 219 SLVVFLVILL 228


>gi|134098026|ref|YP_001103687.1| hypothetical protein SACE_1440 [Saccharopolyspora erythraea NRRL
           2338]
 gi|133910649|emb|CAM00762.1| protein of unknown function DUF81 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 268

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 95/258 (36%), Gaps = 25/258 (9%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            D  +  +  +  A+FL+G +  + G GGGL+ +P +              +  ++ TS 
Sbjct: 11  ADLSLAGLLFLCAAAFLAGAVDAIVG-GGGLIQLPAMLLLV------PGGEVIYSLATSK 63

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  +   + R   I+ +       V  + ++  ++    +  S LN    +  +
Sbjct: 64  IAAVAGTTAAAHTYARKTPIDWRSALPMALVALLGSLGGAMFADALPSSVLNVVVLVALV 123

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYG 189
           L+GI   ++  L               V    G + GF  G  G G G F   L++   G
Sbjct: 124 LVGIYTWRKPELGTAHAPRFQARTQVLVMIAGGALIGFWDGIAGPGTGSFLVFLLVGLVG 183

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
            +   A+AT+  V+      AL+  I +G             V  G  +++   +I  + 
Sbjct: 184 FAFVTASATAKIVNVATNVGALVFFIPAGK------------VLWGLGVLMAVSNITGSV 231

Query: 250 LATKLSYMIGKKYLTIGF 267
           L   ++   G  ++   F
Sbjct: 232 LGALVASRRGSAFVRRVF 249


>gi|300856114|ref|YP_003781098.1| hypothetical protein CLJU_c29480 [Clostridium ljungdahlii DSM
           13528]
 gi|300436229|gb|ADK15996.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
          Length = 120

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 8/124 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA-PT 81
           I L IV   ++G LSGLFG+GGG+++VP L                 A GTSL ++  P 
Sbjct: 4   IVLFIVIGCIAGILSGLFGIGGGIIIVPALIYL-------CGFTQLKAQGTSLAILLPPV 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            +++FM++ ++G +N+         L I +V+ + M   +    + K F I  +L+ + +
Sbjct: 57  GILAFMDYYKNGNVNILAGILICIFLVIGSVLGAKMSHVIPVGIMRKLFGILMMLIAVKL 116

Query: 142 LKRD 145
           +   
Sbjct: 117 IFSK 120



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 12/126 (9%)

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
             +  +  + G + G LSG  G+GGGI     +++  G +  KA  TS  +        +
Sbjct: 1   MSNIVLFIVIGCIAGILSGLFGIGGGIIIVPALIYLCGFTQLKAQGTSLAILLPPV--GI 58

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           L  +           +  G VNI A ++I    ++ + L  K+S++I    +   F ++M
Sbjct: 59  LAFMDY---------YKNGNVNILAGILICIFLVIGSVLGAKMSHVIPVGIMRKLFGILM 109

Query: 272 FTTSFV 277
              +  
Sbjct: 110 MLIAVK 115


>gi|299768584|ref|YP_003730610.1| permease [Acinetobacter sp. DR1]
 gi|298698672|gb|ADI89237.1| permease [Acinetobacter sp. DR1]
          Length = 258

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 93/256 (36%), Gaps = 25/256 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D I  +I  +F +G +    G GGGL+ +P +   F       ++     +GT+      
Sbjct: 6   DVILSLIFFAFTAGAIDAAVG-GGGLIQIPGIMSTF------PNMSTATVIGTNKVSSIF 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     +   +  K+L        I++   +  +S + +S L     +  +++ + 
Sbjct: 59  GTASAAYTFAKKVKLQWKLLAVIAICALISSFAGAACLSLIPQSVLRPFVFVMLIVIAVY 118

Query: 141 MLKRDRL----YCERKFPDNYVKYIWGMV-TGFLSGALGVG-GGIFTNLLMLFYGASIYK 194
            L +         ++      +    G +  GF  G  G G G  F    + F       
Sbjct: 119 TLVKKNFGQVHTEQKITNKMLILAAIGSLAIGFYDGIFGPGTGSFFIFFFIRFLQVDFLH 178

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A S   + +    AL   I +G  +            +   L++   ++L + +  + 
Sbjct: 179 ASALSKIGNFMTNLAALSFLIPTGHAI------------LHIGLMMAVANVLGSVVGVRT 226

Query: 255 SYMIGKKYLTIGFSMI 270
           +   G  ++ I F ++
Sbjct: 227 ALKYGSGFVRIIFLIL 242


>gi|90023066|ref|YP_528893.1| hypothetical protein Sde_3426 [Saccharophagus degradans 2-40]
 gi|89952666|gb|ABD82681.1| protein of unknown function DUF81 [Saccharophagus degradans 2-40]
          Length = 260

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 101/279 (36%), Gaps = 39/279 (13%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++++    +A  L G + GL GVGGG +M P+L       G+  +    V++GT L   A
Sbjct: 1   MEFLYFFALAGLLVGFVVGLTGVGGGSLMTPILI----HFGVSPA----VSVGTDLLYAA 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH------VDKSFLNKAFAIF 133
            T       H +   ++ +I            + T   +S          + +       
Sbjct: 53  ITKGGGIYVHHKKRNVDWRIAGLLCCGSIPAALATLWFLSASGFDSETVNTLIKVGLGWT 112

Query: 134 CLLMGILMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTN 182
            L+   ++L + ++    +  D           N    I G+V G +     +G G    
Sbjct: 113 ILITAFVILFKQQIMRYSRQNDIWITRLTGSHQNAATIIVGLVMGVIVTLTSIGAGALGT 172

Query: 183 --LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             L +LF    + +   T    +  +              + GL   S+G V+   +  +
Sbjct: 173 VALFLLFPFLPVVRLVGTEIAHAVPLTL------------VAGLGHASVGNVDWNLLFNL 220

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           L  S+    + + L++ +  KYL  G ++++       A
Sbjct: 221 LIGSLPGVFVGSHLAHRVSDKYLRPGLAVMLIYAGSKLA 259



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 43/117 (36%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+   + G +  L  +G G +    L   F  + +         +GT +    P ++++ 
Sbjct: 150 IIVGLVMGVIVTLTSIGAGALGTVALFLLFPFLPVVRL------VGTEIAHAVPLTLVAG 203

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + H   G ++  +L + +        V S +   V   +L    A+  +  G  +  
Sbjct: 204 LGHASVGNVDWNLLFNLLIGSLPGVFVGSHLAHRVSDKYLRPGLAVMLIYAGSKLAF 260


>gi|323692205|ref|ZP_08106448.1| hypothetical protein HMPREF9475_01311 [Clostridium symbiosum
           WAL-14673]
 gi|323503779|gb|EGB19598.1| hypothetical protein HMPREF9475_01311 [Clostridium symbiosum
           WAL-14673]
          Length = 253

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 71/206 (34%), Gaps = 16/206 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +  +    FL+  +  + G GGGL+ +P     F  M +      H A   +     
Sbjct: 4   ITSLLFLCPIMFLASFVDAISG-GGGLLSLPA--YLFTGMPV------HNAYACNKLCCN 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            ++ MS   + ++  I+ K       V    +V+ S ++  +    L+         + I
Sbjct: 55  ISTAMSAGRYLKNNLIDKKAAFFVGAVTFCCSVLASKIVLWMPDRALSLMLLGSMPFVAI 114

Query: 140 LMLKRDRLYCERKF-----PDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLML-FYGASI 192
           L+L   +   E              +I+ G+  G   G LG G G    ++        +
Sbjct: 115 LILVNKKYPKEDHSDEVTGNRKIGLWIFTGIAMGAYDGMLGPGSGTLAIIIYTKLLKYDL 174

Query: 193 YKATATSAGVSALIAFPALLVRIYSG 218
            +A+  +            +  + +G
Sbjct: 175 TRASGNAKVAVFSSTLAGTISYLLAG 200


>gi|323358330|ref|YP_004224726.1| permease [Microbacterium testaceum StLB037]
 gi|323274701|dbj|BAJ74846.1| predicted permease [Microbacterium testaceum StLB037]
          Length = 272

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 101/267 (37%), Gaps = 25/267 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + ++++A+ ++G +  + G GGGL+ +P L      +G+   +     +GT+     
Sbjct: 15  VAALVVLLIAAGVAGWVDAVVG-GGGLIQLPALV-----VGVPKDVATPFILGTNKLSSF 68

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ +   + R   + + +L   +      + V + +  ++ +  L     +  + + +
Sbjct: 69  FGTLSASWVYLRKIRVQLVLLLPLVVGAYAGSTVGAALSRYIAREVLTPIVLVAVIAVAL 128

Query: 140 LMLKRDRLYCERKFPDNYVKYIW------GMVTGFLSGALGVG-GGIFTNLLMLFYGASI 192
             L + ++  E +   +    I       G+  GF  G LG G G  F  L++   G   
Sbjct: 129 YTLLKPKMGLEHEPRYSAPTAIAWRAAAIGLAVGFYDGILGPGTGSFFVILIVSVLGYGF 188

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +A+  +   +      AL V    G  L  L             L +  +++    +  
Sbjct: 189 LQASVNAKIANLTTNLAALAVYGVHGEILVVLG------------LAMAVMNVTGGFIGA 236

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            ++   G  ++ I F + +       A
Sbjct: 237 HMATRRGSGFVRIVFLVTLSILIVKLA 263


>gi|50086291|ref|YP_047801.1| hypothetical protein ACIAD3306 [Acinetobacter sp. ADP1]
 gi|49532267|emb|CAG69979.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter sp. ADP1]
          Length = 256

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 75/205 (36%), Gaps = 13/205 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ +  +I  +F +G +    G GGGL+ +P +      MG    +     +GT+     
Sbjct: 3   IEVLLSLIFFAFCAGAIDAAVG-GGGLIQIPAI------MGTFPQMSPATVIGTNKLSSI 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  +     R   +  K+L        I++ + +  +S + +S L     +  +++ I
Sbjct: 56  FGTASAAYTFVRKVKLQWKLLAVIAVCALISSFLGAACLSMIPQSVLKPFVFVMLIVIAI 115

Query: 140 LMLKRD-----RLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIY 193
             L +          +       +  I  ++ GF  G  G G G  F    + F      
Sbjct: 116 YTLVKKNFGQVHFDLKITPKVLVLAAIGSLLIGFYDGIFGPGTGSFFIFFFIRFLNVDFL 175

Query: 194 KATATSAGVSALIAFPALLVRIYSG 218
            A+A S   + +    AL     +G
Sbjct: 176 HASALSKIGNFMTNLAALSFLAPTG 200


>gi|315304559|ref|ZP_07874810.1| permease [Listeria ivanovii FSL F6-596]
 gi|313627067|gb|EFR95949.1| permease [Listeria ivanovii FSL F6-596]
          Length = 184

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  SGL G+G G   V         + +   + + V+  TS  ++  T+  S   +   
Sbjct: 75  AGIASGLLGIGSGAFKV-------MALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQ 127

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           G I   I       + +   + + ++  +    +   F    L +   M+ 
Sbjct: 128 GDIQPAIAAPVAIGVLVGATLGTRVMQRLKSKVIRIIFIPVILYVAFQMIL 178



 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 59/188 (31%), Gaps = 41/188 (21%)

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKR----------------------------DRLYCER 151
            +  + L   F +  L     M+K+                             R   + 
Sbjct: 1   LLSATALYIIFGLLLLYSAFNMIKKVGSEFPTNVKPDPIATKLNLHDSYYDKSLRQTVDY 60

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPA 210
           +  +    +      G  SG LG+G G F  + + +F    +  ++ATS  +  + A  +
Sbjct: 61  QVANVPAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSATSNLMMGVTAAAS 120

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
             V ++ G     +               +    ++   L T++   +  K + I F  +
Sbjct: 121 ATVYLFQGDIQPAI------------AAPVAIGVLVGATLGTRVMQRLKSKVIRIIFIPV 168

Query: 271 MFTTSFVF 278
           +   +F  
Sbjct: 169 ILYVAFQM 176


>gi|171185687|ref|YP_001794606.1| hypothetical protein Tneu_1233 [Thermoproteus neutrophilus V24Sta]
 gi|170934899|gb|ACB40160.1| protein of unknown function DUF81 [Thermoproteus neutrophilus
           V24Sta]
          Length = 242

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F+ G  S LFGVGGG V VP L            +    A   S+G+I PT+V S   + 
Sbjct: 128 FIGGFASSLFGVGGGTVFVPTLML-------TSGLDAKRAAAMSMGIIFPTAVSSVATYA 180

Query: 91  RHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMGILML 142
             G +++ +    +    + + ++S  ++  + +  + + F  +   +G+  L
Sbjct: 181 ALGVLDVSLAAATVAGSFVGSYISSRYIMGKLRRDAVRRLFVGYVYAVGVYYL 233



 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 55/165 (33%), Gaps = 25/165 (15%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            +    A   S+  I  +S  +   +RR   I+ K L  +  +      V++        
Sbjct: 34  GVPFQAAAAASMFSIVVSSATAVYNYRR--AIDFKSLAGYAALSLAAAAVSAAFSVKYSG 91

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI----------WGMVTGFLSGAL 173
            ++  A+ ++ + +G ++LK         +    + +I                      
Sbjct: 92  PWVKLAYGLYLVSVGSVLLKNVEPRRNAPWLGPPLVFIGGFASSLFGVG----------- 140

Query: 174 GVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             GG +F   LML  G    +A A S G+    A  ++      G
Sbjct: 141 --GGTVFVPTLMLTSGLDAKRAAAMSMGIIFPTAVSSVATYAALG 183


>gi|226327960|ref|ZP_03803478.1| hypothetical protein PROPEN_01842 [Proteus penneri ATCC 35198]
 gi|225203664|gb|EEG86018.1| hypothetical protein PROPEN_01842 [Proteus penneri ATCC 35198]
          Length = 78

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 4/72 (5%)

Query: 24 CLIIVASFLSGTLSGLFGVGGGLVMVPVLS-KAFQLMGI---DDSICMHVAMGTSLGVIA 79
            +I    +SG  + LFG GGG V VP+L      L GI        M +A+ TS  ++ 
Sbjct: 3  LWLISFGLISGITTWLFGFGGGFVTVPLLYTLILTLWGIDSLPAEHAMQIAVATSALIML 62

Query: 80 PTSVMSFMEHRR 91
           ++ ++ ++H +
Sbjct: 63 FSATVTTIKHHK 74


>gi|184159674|ref|YP_001848013.1| permease [Acinetobacter baumannii ACICU]
 gi|332873811|ref|ZP_08441753.1| hypothetical protein HMPREF0022_01363 [Acinetobacter baumannii
           6014059]
 gi|183211268|gb|ACC58666.1| predicted permease [Acinetobacter baumannii ACICU]
 gi|322509585|gb|ADX05039.1| permease [Acinetobacter baumannii 1656-2]
 gi|323519605|gb|ADX93986.1| permease [Acinetobacter baumannii TCDC-AB0715]
 gi|325123684|gb|ADY83207.1| hypothetical protein BDGL_002621 [Acinetobacter calcoaceticus
           PHEA-2]
 gi|332738034|gb|EGJ68919.1| hypothetical protein HMPREF0022_01363 [Acinetobacter baumannii
           6014059]
          Length = 258

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 93/256 (36%), Gaps = 25/256 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D I  +I  +F +G +    G GGGL+ +P +   F       ++     +GT+      
Sbjct: 6   DVILSLIFFAFTAGAIDAAVG-GGGLIQIPGIMSTF------PNMSTATVIGTNKVSSIF 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     +   +  K+L        I++   +  +S + +S L     +  +++ I 
Sbjct: 59  GTASAAYTFAKKVKLQWKLLAVIAICALISSFAGAACLSLIPQSVLRPFVFVMLIVIAIY 118

Query: 141 MLKRDRL----YCERKFPDNYVKYIWGMV-TGFLSGALGVG-GGIFTNLLMLFYGASIYK 194
            L +         ++      +    G +  GF  G  G G G  F    + F       
Sbjct: 119 TLVKKNFGQVHTEQKITTKMLILAGIGSLAIGFYDGIFGPGTGSFFIFFFIRFLQVDFLH 178

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A S   + +    AL   I +G  +            +   L++   ++L + +  + 
Sbjct: 179 ASALSKIGNFMTNLAALSFLIPTGHAI------------LHIGLMMAAANVLGSIVGVRT 226

Query: 255 SYMIGKKYLTIGFSMI 270
           +   G  ++ I F ++
Sbjct: 227 ALKYGSGFVRIIFLIL 242


>gi|90418711|ref|ZP_01226622.1| possible membrane protein [Aurantimonas manganoxydans SI85-9A1]
 gi|90336791|gb|EAS50496.1| possible membrane protein [Aurantimonas manganoxydans SI85-9A1]
          Length = 308

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 76/226 (33%), Gaps = 44/226 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++       G LSGLFGVGGG ++ P+L           +I   VA+ T    +  +S
Sbjct: 14  LVVLFGMGAAVGFLSGLFGVGGGFLITPLLIFY--------NIPPAVAVATGANQVIASS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
               + H + GT+++K+    +      +     + + +         ++  + +F   +
Sbjct: 66  FSGALAHYKRGTVDLKLGTVLLIGGTAGSAAGVALFTLLRRIGQLDLVVSLLYVVFLGGV 125

Query: 138 GILML------------------------------KRDRLYCERKFPDNYVKYIWGMVTG 167
           G LML                               + R    + F         G + G
Sbjct: 126 GGLMLVESIQSLRRSSGGSGEIRRSGKHNWIHGLPLKMRFQRSKLFVSVIPVLAIGFLIG 185

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
            L+G +GVGGG      +++           TS       A    +
Sbjct: 186 TLAGIMGVGGGFIMVPALIYLLRVPTNVVIGTSLFQIIFTAAVTTV 231



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 9/115 (7%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M F      V  I ++ +  FL GTL+G+ GVGGG +MVP L    +       +  +V 
Sbjct: 163 MRFQRSKLFVSVIPVLAI-GFLIGTLAGIMGVGGGFIMVPALIYLLR-------VPTNVV 214

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +GTSL  I  T+ ++ +        I++ +    +    I     +     +   
Sbjct: 215 IGTSLFQIIFTAAVTTVLQASTNHTIDVVLAFFLMLGGVIGAQFGAEAGRKLRGD 269


>gi|84498665|ref|ZP_00997422.1| hypothetical protein JNB_20098 [Janibacter sp. HTCC2649]
 gi|84381062|gb|EAP96948.1| hypothetical protein JNB_20098 [Janibacter sp. HTCC2649]
          Length = 259

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 80/205 (39%), Gaps = 13/205 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +A F++G +  + G GGGLV +P L     L+G   +    + + T+     
Sbjct: 6   LTTLALMGLAGFVAGWIDAVVG-GGGLVQLPAL-----LLGFPGATPAQL-LATNKFGSI 58

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +V S   + R    +++       V     +  +L+  H+ KS  N    +  + +G 
Sbjct: 59  WGTVTSAATYWRRVKPDLRTALPMAAVAYFGAIGGALLGLHIPKSAFNPIILVMLIGVGA 118

Query: 140 LMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIY 193
             L +  L  +               + G V G   GALG G G F    ++   G +  
Sbjct: 119 YTLFKPALGTKTALRWDGTRHTVTAMLVGFVIGVYDGALGPGTGSFMVFALVGLMGYAFL 178

Query: 194 KATATSAGVSALIAFPALLVRIYSG 218
           +A+A +   +      AL V    G
Sbjct: 179 EASAKAKIANFATNLGALTVFAPGG 203


>gi|239906253|ref|YP_002952993.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
 gi|239796118|dbj|BAH75107.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
          Length = 456

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 99/301 (32%), Gaps = 73/301 (24%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              + I     +G ++G  G GGG ++ P L        +   +   +A+GT L  I   
Sbjct: 109 IFLVSIAVGLAAGLITGCIGAGGGFIITPAL--------MAAGVKGILAVGTDLFHIFAK 160

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS-------HVDKSFLNKAFAIFC 134
           ++M    H++ G +++K+   ++      T +   +          + + F++  +A+  
Sbjct: 161 AIMGTAVHKKLGNVSVKLAIAFLVGSGGGTFIGGAINKGLYNKDPLLSEFFISSIYAVLL 220

Query: 135 LLMGILML--------------------------------------------KRDRLYCE 150
             +G   L                                              +     
Sbjct: 221 GFLGFYALFDFLKASRQQDTGGDSHGGSHGGPSGMTGMAVKLQNLNIAPMISFDEDFVPG 280

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFP 209
            K    ++    G++ G L+  +GVGGG  T  + ++ +G S      T        A  
Sbjct: 281 GKRISGWIVAAGGVIVGILAALMGVGGGFITFPMFVYVFGVSSMTTVGTDILQIIFTAGL 340

Query: 210 ALLVRIYSGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
             +              +++ G+V     + +L  S+L   +    + ++   ++   ++
Sbjct: 341 GAIA------------QYAIYGYVFYTLAMGMLLGSLLGIQIGALTTKVVKGIHIRGFYA 388

Query: 269 M 269
           M
Sbjct: 389 M 389



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 42/118 (35%), Gaps = 8/118 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++     + G L+ L GVGGG +  P+    F        +     +GT +  I  T+ 
Sbjct: 287 WIVAAGGVIVGILAALMGVGGGFITFPMFVYVF-------GVSSMTTVGTDILQIIFTAG 339

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +  +     +G +   +    +    +   + +L    V    +   +A+  +   I 
Sbjct: 340 LGAIAQYAIYGYVFYTLAMGMLLGSLLGIQIGALTTKVVKGIHIRGFYAMSIIAGFIN 397


>gi|221198026|ref|ZP_03571072.1| putative membrane protein [Burkholderia multivorans CGD2M]
 gi|221204416|ref|ZP_03577433.1| putative membrane protein [Burkholderia multivorans CGD2]
 gi|221175273|gb|EEE07703.1| putative membrane protein [Burkholderia multivorans CGD2]
 gi|221181958|gb|EEE14359.1| putative membrane protein [Burkholderia multivorans CGD2M]
          Length = 268

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 50/272 (18%), Positives = 96/272 (35%), Gaps = 40/272 (14%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G + GL G GGG++ VP L        +     M  A   +L  +A ++ +  
Sbjct: 5   LLLGGCVGAVLGLTGAGGGILAVPALV-------VGMGWPMQQATPVALVAVAGSAALGA 57

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK--- 143
           +E  R G +  +            T + + +   + +  L   FA+  L++   +L+   
Sbjct: 58  LEGFRRGLVRYRAALLMAVAGVPLTTLGARLAHVLPQRVLLALFALTMLIVATRLLRQAL 117

Query: 144 ------------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
                              D       +P        G VTG ++G LGVGGG     ++
Sbjct: 118 RQPTADAQVSPLCVGRVNPDTGRLVWSWPVGLALASTGAVTGLMTGLLGVGGGFVIVPML 177

Query: 186 LFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
             +   S++   ATS  V AL+    +   + +G               I  +L     +
Sbjct: 178 RKFTNVSMHGIVATSLMVIALVGTGGVFATLAAGTHAA-----------IDVMLWFTVAT 226

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            L        S  +  +++  GF+ ++   + 
Sbjct: 227 ALGMAAGRGASRHLSARHVQAGFATVLVCVAL 258



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            V  + G   G + G  G GGGI     L++  G  + +A          +A  A+    
Sbjct: 2   LVSLLLGGCVGAVLGLTGAGGGILAVPALVVGMGWPMQQA--------TPVALVAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +  G V   A L++    + +T L  +L++++ ++ L   F++ M   +
Sbjct: 54  ALG----ALEGFRRGLVRYRAALLMAVAGVPLTTLGARLAHVLPQRVLLALFALTMLIVA 109

Query: 276 FV 277
             
Sbjct: 110 TR 111


>gi|83645435|ref|YP_433870.1| permease [Hahella chejuensis KCTC 2396]
 gi|83633478|gb|ABC29445.1| predicted Permease [Hahella chejuensis KCTC 2396]
          Length = 256

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 102/270 (37%), Gaps = 31/270 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L IVA    G L GL GVGGG +M P+L               H A+GT L   A T 
Sbjct: 3   ILLYIVAGAGVGFLVGLTGVGGGSLMTPLLILF--------GFPAHTAIGTDLLYAAITK 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH------VDKSFLNKAFAIFCLL 136
               + H R GT+N K+           +++T+ +++H        K  L  +  +  ++
Sbjct: 55  SGGVVTHARSGTVNWKLAATLGAGSIPASIITTQILAHYFPHPEAYKHLLTTSLGLMLIV 114

Query: 137 MGILMLKRDRL-------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
              ++L +DRL                 V    G++ G       VG G     L++   
Sbjct: 115 TAAVLLFKDRLLRTSSGATVMSDERRAGVTVFMGVILGVFVTLSSVGAGAIGTALLML-- 172

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +Y A ++S  V   +A    L  I       GL    LG ++   +  +L  S+    
Sbjct: 173 --LYPALSSSRVVGTDLAHAVPLTFI------AGLGHMQLGNIDYYLLGSLLIGSLPAIH 224

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             T L+  +  + L    + ++      +A
Sbjct: 225 FGTALAKRMPSEVLRPALASMLLIIGVKYA 254


>gi|213966702|ref|ZP_03394853.1| DUF81 [Pseudomonas syringae pv. tomato T1]
 gi|213928552|gb|EEB62096.1| DUF81 [Pseudomonas syringae pv. tomato T1]
          Length = 241

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 91/258 (35%), Gaps = 39/258 (15%)

Query: 41  GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKIL 100
           GVGGG +M P+L       GI+ +     A+GT L   A T     + HR++  I+ K+ 
Sbjct: 3   GVGGGSLMTPILLW----FGINPAT----AVGTDLLYAAITKSGGVLVHRKNDNIDWKVT 54

Query: 101 KDWIFVLPITTVVTSLMISHVDK------SFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
                      ++T   +S +        + + +A     LL  + +L + +L       
Sbjct: 55  GLLTLGSVPAVLLTLWFLSTLHTAPDALNAIIKQALGYVLLLTALAVLFKKKLLAFAHGR 114

Query: 155 D-----------NYVKYIWGMVTGFLSGALGVGGGIFTN--LLMLFYGASIYKATATSAG 201
                         +  I G++ G +     +G G      L +L+      +   T   
Sbjct: 115 GDGQSFFSGTSLTVLTVITGLILGTMVALTSIGAGALGTVALFILYPLLPTRRLVGTEIA 174

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
            +  +              + GL   S+G +N   +  +L  S+    L + ++  +   
Sbjct: 175 HAVPLTL------------VAGLGHASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDD 222

Query: 262 YLTIGFSMIMFTTSFVFA 279
            L    ++++    F  A
Sbjct: 223 LLRPFLAIMLGMIGFKLA 240



 Score = 43.1 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 45/120 (37%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + GT+  L  +G G +    L   + L+           +GT +    P ++
Sbjct: 128 VLTVITGLILGTMVALTSIGAGALGTVALFILYPLL------PTRRLVGTEIAHAVPLTL 181

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G +N ++L   +        + S M   V    L    AI   ++G  +  
Sbjct: 182 VAGLGHASMGNMNWELLGWLLMGSLPGIYLGSHMAGRVSDDLLRPFLAIMLGMIGFKLAF 241


>gi|296329275|ref|ZP_06871776.1| membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296153631|gb|EFG94448.1| membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 254

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 92/263 (34%), Gaps = 27/263 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++ V  F++  +  + G GGGL+ +P         G       H+A+GT+      ++
Sbjct: 8   FLILAVFCFIAAVVDAISG-GGGLISLPAYFAV----GFPP----HMALGTNKLSAFLST 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S  +  +   +N++I+           V+       +D  +         +L+ +  L
Sbjct: 59  FASAFKFWKAKKVNVEIVSKLFVFSLAGAVLGVKTAVSIDTKYFKPISFGILILVFLYAL 118

Query: 143 KRDRLYCERKFPDNYVKYIW-----GMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
           K   L     +     K I          GF  G LG G   F    ++  +      A+
Sbjct: 119 KNKSLGENNYYKGTTPKTIVLGKIMAFCLGFYDGFLGPGTAAFLMFCLIKIFKLDFSSAS 178

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++    F +L+V  +            LG +N    + I  +      + ++L+ 
Sbjct: 179 GNTKILNLSSNFASLVVFAF------------LGKLNWAYGISIAIVMTFGAIIGSRLAI 226

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
           + G K++   F ++        +
Sbjct: 227 LKGNKFIKPVFLVVTIVLILKMS 249


>gi|256789828|ref|ZP_05528259.1| hypothetical protein SlivT_35563 [Streptomyces lividans TK24]
 gi|289773711|ref|ZP_06533089.1| predicted protein [Streptomyces lividans TK24]
 gi|289703910|gb|EFD71339.1| predicted protein [Streptomyces lividans TK24]
          Length = 247

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 73/238 (30%), Gaps = 18/238 (7%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           G  G GG ++ VP L                 A   SL V+  TSV + + H R G +  
Sbjct: 19  GALGAGGSILTVPALVYLLGF-------TPAAATTASLVVVIVTSVTALVAHARAGAVRW 71

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY 157
           +    +     +       + S V  + L   FA    L G+ ML R             
Sbjct: 72  RAGLLFAAAGVLPAAGAGALSSRVPATVLTLLFAALAALAGLHMLGRRAPRENGAVSGAR 131

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
                  +          GG +    L+      +  A  TS  V    A  AL  R YS
Sbjct: 132 AAGAGAGLGAVTGFLGVGGGFLAVPALVTVLAVPMSAAVGTSLLVVGANALVALAARAYS 191

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
              L+              +L  L  ++L      +L+  +    L   F  ++   +
Sbjct: 192 SVHLDLT-----------LLLPFLAAAVLGAWDGRRLAAKVSAGTLRRVFGAVLLAVA 238


>gi|219669184|ref|YP_002459619.1| hypothetical protein Dhaf_3160 [Desulfitobacterium hafniense DCB-2]
 gi|219539444|gb|ACL21183.1| protein of unknown function DUF81 [Desulfitobacterium hafniense
           DCB-2]
          Length = 443

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 99/293 (33%), Gaps = 65/293 (22%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I    ++G ++G  G GGG ++ P L            +   +++GT +  I   ++M  
Sbjct: 79  IAIGVVAGLVTGCIGAGGGFLITPALMSL--------GVKGILSVGTDMFHIFAKAIMGT 130

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-------DKSFLNKAFAIFCLLMGI 139
             H++ G +N+ +   ++    +      ++   +           ++  +A+    +G 
Sbjct: 131 TLHKKMGNVNVGLAVAFLVGSGLGVTGGGIINRALYNYNPVMSDFTISMIYAVLLGFLGF 190

Query: 140 LML--------------------------------------KRDRLYCERKFPDNYVKYI 161
             L                                        +++    +        I
Sbjct: 191 FALSDYFKVRKSELSKNKIGLEKLTPMAERMQSVNLAPMIQFDEKIVPGGRKISGVFVAI 250

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
            G +TG L+  LGVGGG  T  + ++             G+S        +++I    G 
Sbjct: 251 SGAITGLLAAILGVGGGFVTFPMFVY-----------GLGISTYTTVGTDILQIIFTAGY 299

Query: 222 NGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
             +  ++L G++     +  L  S+L   +    + ++ +  +   +++ +  
Sbjct: 300 GAIAQYALYGYIFYTLAMGCLLGSLLGVQIGAITTKVVSQSKIKAFYAIAILA 352



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 8/121 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + ++  ++G L+ + GVGGG V  P+             I  +  +GT +  I  T+ 
Sbjct: 246 VFVAISGAITGLLAAILGVGGGFVTFPMFVYGL-------GISTYTTVGTDILQIIFTAG 298

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              +     +G I   +    +    +   + ++    V +S +   +AI  L   I  +
Sbjct: 299 YGAIAQYALYGYIFYTLAMGCLLGSLLGVQIGAITTKVVSQSKIKAFYAIAILAGFINRI 358

Query: 143 K 143
            
Sbjct: 359 F 359


>gi|294618358|ref|ZP_06697938.1| hypothetical protein EfmE1679_1236 [Enterococcus faecium E1679]
 gi|291595369|gb|EFF26682.1| hypothetical protein EfmE1679_1236 [Enterococcus faecium E1679]
          Length = 278

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 91/253 (35%), Gaps = 26/253 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  V   L+ T+  + G+GGG+++ P+L        I       ++  +++ V   + V
Sbjct: 4   LIYFVVIVLANTVGAISGMGGGVLIKPILDL------IGAHSIAGISFYSTVAVFTMSIV 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------LNKAFAIFCLL 136
            +  +     ++  +I+        +  +  +++     + F       L + F     L
Sbjct: 58  STVRQVSSGKSLYWQIVGWVSGGAVVGGIAGNIVFEVFLRLFENEKHVQLIQIFLTVLTL 117

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           +            +          I G + GFL+  LG+GGG     LLML +   I +A
Sbjct: 118 V-FAFFYTKHHQPKFHLTSWIWYLICGGILGFLASFLGIGGGPINVSLLMLMFALPIKEA 176

Query: 196 TATSAGVSALIAFPALLV-RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           T  S           L+   + SG+    L            +  I P +++      K 
Sbjct: 177 TLYSLSTIFFSQLAKLVTIALTSGFMRFDLS----------MLFYIFPAAVIGGLWGAKF 226

Query: 255 SYMIGKKYLTIGF 267
           S ++  K +T  F
Sbjct: 227 SRILSPKKVTFIF 239


>gi|163760683|ref|ZP_02167763.1| hypothetical protein HPDFL43_12543 [Hoeflea phototrophica DFL-43]
 gi|162282005|gb|EDQ32296.1| hypothetical protein HPDFL43_12543 [Hoeflea phototrophica DFL-43]
          Length = 250

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 13/195 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
            A F++G +  + G GGGL+ VP L  A              A+GT+       S  + +
Sbjct: 14  AAGFMAGFVDSIAG-GGGLIAVPALLLA--------GFTPVEALGTNKVQGLFGSGSATI 64

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            + R G ++++       +      + +L+ + V             + + +    +  +
Sbjct: 65  AYARKGHVDLRSQLAPAVLSAAGAAIGALLATVVPGDVFRAVLPFLLIAIALYFAFKPNM 124

Query: 148 YC---ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVS 203
                 R+        +   + G   G  G G G  F    +   G  + KATA +  ++
Sbjct: 125 NDLDRARRLSPFLFGLLVVPMIGLYDGVFGPGAGSFFMLAFVTLAGYGLLKATAHTKLLN 184

Query: 204 ALIAFPALLVRIYSG 218
                 A  V  + G
Sbjct: 185 FASNLGAFAVFAFVG 199


>gi|158423705|ref|YP_001524997.1| hypothetical protein AZC_2081 [Azorhizobium caulinodans ORS 571]
 gi|158330594|dbj|BAF88079.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
          Length = 265

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 61/180 (33%), Gaps = 15/180 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L      +G+      H+A+GTS   +A ++  +   H R G +       + F   
Sbjct: 34  VPLLVYL---VGVPSP---HLAIGTSAVAVAVSAAANLAGHARAGHVKWPCAIVFTFAGV 87

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD--------RLYCERKFPDNYVKY 160
           +     S +   +D   L   F    + + + M +R         RL             
Sbjct: 88  LGATFGSTLGKAMDGQKLLLLFGALMIAIALAMFRRTGTGEDPAVRLSSTSAPVLLPRLI 147

Query: 161 IWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
             G+  G LSG  G+GGG      L+      +  A  +S            +    SG+
Sbjct: 148 GMGVAVGTLSGFFGIGGGFLVVPGLLAATRMPLIFAIGSSLVAVTAFGVTTAVNYAVSGF 207


>gi|121536018|ref|ZP_01667808.1| conserved hypothetical protein [Thermosinus carboxydivorans Nor1]
 gi|121305408|gb|EAX46360.1| conserved hypothetical protein [Thermosinus carboxydivorans Nor1]
          Length = 122

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 36/86 (41%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            I  H A G S+ VI PT++   ++  +   IN ++            ++++  +  +  
Sbjct: 37  GISQHTAQGISMLVIIPTAIAGILQFHKDKLINYRVAGYLALGAIAGALLSANFVQAIPA 96

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYC 149
             L + F IF ++ G+ M+       
Sbjct: 97  ETLKRLFGIFVIVTGLRMVLAKPKKS 122


>gi|121609461|ref|YP_997268.1| hypothetical protein Veis_2505 [Verminephrobacter eiseniae EF01-2]
 gi|121554101|gb|ABM58250.1| protein of unknown function DUF81 [Verminephrobacter eiseniae
           EF01-2]
          Length = 245

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 69/200 (34%), Gaps = 14/200 (7%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +++ A  L+  + G+ G G  +V VP+L     L      I +   + T         V 
Sbjct: 8   ILLSAITLAYAVFGMTGFGAAMVAVPILVHILPLEFAVPLILLMDIVAT---------VS 58

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             ++ RRH  + +  L   +  L +  ++ + ++S +   +L  A  +F L M       
Sbjct: 59  VALKSRRH--VVLAELLRLLPSLLVGVLLGATILSRIKSGWLLIALGVFVLAMSARSFFM 116

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            R     +          GM  G  S   G GG     + +      +    AT A +  
Sbjct: 117 RR--AAAQPIGWQWSVPAGMAGGIFSALFGTGG-PVYTMYLARRLPDLEAFRATIAALIF 173

Query: 205 LIAFPALLVRIYSGWGLNGL 224
           L A         +G     L
Sbjct: 174 LSAIARSGAFAVTGLLQEPL 193


>gi|134096389|ref|YP_001101464.1| hypothetical protein HEAR3236 [Herminiimonas arsenicoxydans]
 gi|133740292|emb|CAL63343.1| Putative permease [Herminiimonas arsenicoxydans]
          Length = 245

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 94/257 (36%), Gaps = 22/257 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++ A  L G L G  G+G G+++VPVL+          ++ +  A+  +    A  ++
Sbjct: 5   WIMLPAVLLIGGLIGASGIG-GVLLVPVLTNF-------GAVSLPQAIAAASLGFALPAL 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++     R   + ++ +   +    +  V  +L +  +    L     +  L  G   L+
Sbjct: 57  VALKPMLRQRELVVRCM-PLLIGALVGAVTGALTVHWLSARTLMMGVMLLVLFAGWRGLQ 115

Query: 144 RDRLYCERKFPDN-YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +  +   P N  V ++ G++ G  S   G GG +    L++     +  A   +  +
Sbjct: 116 SPAIAAQAAAPLNIPVLFMMGVLVGCGSALTGTGGPVLIIPLLMLMRQPVAFAIVAAQAI 175

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              +A  +  V    G     L             LI   + ++      + +  +  + 
Sbjct: 176 QLPVALASSAVHALEGRLDFRL------------ALICGLLMLIGAFFGQRAAAGLDVRQ 223

Query: 263 LTIGFSMIMFTTSFVFA 279
           L    S+++      FA
Sbjct: 224 LRRMVSILLLAAGGWFA 240


>gi|68535314|ref|YP_250019.1| hypothetical protein jk0249 [Corynebacterium jeikeium K411]
 gi|68262913|emb|CAI36401.1| putative membrane protein [Corynebacterium jeikeium K411]
          Length = 337

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 68/206 (33%), Gaps = 23/206 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVA-MGTSLGVIAP 80
           I +  +   ++  + G  G+  G+    +L   F  +G    S  +H+A +GT+L     
Sbjct: 3   ILIFALVGVVAQLVDGALGMAFGITATTLL--IFSGLGPAHASAAIHLAEVGTTLF---- 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
               S + H R   ++   +            + + ++S++         +   +L+G  
Sbjct: 57  ----SGLSHWRLKNVHWPTVLALGVPGAFGAFMGAYVLSNLSTEAAEPVVSTLLVLLGAY 112

Query: 141 MLKRD-----------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
           +L R            +     +     +  +        +   G  G + T+ LM    
Sbjct: 113 VLVRSVAVPWKKNENTQPVSTTRRSRLGLAGLGLAGGFLDASGGGGWGPVTTSTLMSVGK 172

Query: 190 ASIYKATATSAGVSALIAFPALLVRI 215
           A   +   T      L+A  A    +
Sbjct: 173 AEPRRIIGTVNTAEFLVAISATAGFV 198


>gi|329902819|ref|ZP_08273267.1| membrane protein [Oxalobacteraceae bacterium IMCC9480]
 gi|327548614|gb|EGF33271.1| membrane protein [Oxalobacteraceae bacterium IMCC9480]
          Length = 266

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 79/268 (29%), Gaps = 42/268 (15%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  I++  F  G +  L G GGG++ VP+L            + M  A    L  +   +
Sbjct: 1   MITILLLGFTVGLILALTGAGGGILAVPLLVF-------GAGLGMAEAGPIGLLAVGLAA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +   R+ T+  K       V  + +     +        L   FA   L +     
Sbjct: 54  TLGALLGLRNKTVRYKAALLIAGVGIVCSPFGLWLAQRTPNRPLTIVFAAVLLYVAFRTF 113

Query: 143 KRDRLYCERKFPDNY-----------VKYIWGMVTGFLSGALGVGGG------------I 179
            + R     + PD+             K  W     +     G+  G            +
Sbjct: 114 MKTRPATPTRVPDSAPVPPCMLDDTRGKLSWTAPCAWSLALSGMAAGLLSGLLGVGGGFV 173

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
               L  +   S     ATS  V +L++   ++    +            G +     + 
Sbjct: 174 MVPALQRYTNLSAQSVVATSLAVISLVSMSGVIASAVT------------GHLQWAVAIP 221

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGF 267
               ++L      +L+  +    L   F
Sbjct: 222 FSGGAVLGMLAGRQLAARLAGPQLQRSF 249



 Score = 44.3 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 15/120 (12%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            + G   G +    G GGGI    L++F             G    +A    +  +  G 
Sbjct: 5   LLLGFTVGLILALTGAGGGILAVPLLVF-------------GAGLGMAEAGPIGLLAVGL 51

Query: 220 GLNGLPPWSLGF--VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    L    V   A L+I  + I+ +P    L+     + LTI F+ ++   +F 
Sbjct: 52  AATLGALLGLRNKTVRYKAALLIAGVGIVCSPFGLWLAQRTPNRPLTIVFAAVLLYVAFR 111


>gi|319403784|emb|CBI77368.1| putative membrane protein [Bartonella rochalimae ATCC BAA-1498]
          Length = 306

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 55/150 (36%), Gaps = 8/150 (5%)

Query: 2   YDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI 61
           Y+ +      V+     +   I  ++   F+ G LS + GVGGG + VP L         
Sbjct: 154 YNWIDRLPFKVYFQASMIYVSIIPVLGIGFVVGLLSSIMGVGGGFITVPALIYLLH---- 209

Query: 62  DDSICMHVAMGTSLGVIAPTS-VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
              +   V +GTSL  +   S   + ++   + ++++ +         I           
Sbjct: 210 ---VPTSVVVGTSLFQMTFVSAFTTVLQSVSNQSVDIVLAFLLTIGGGIGAQYGVRTGQK 266

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           +    L  A A   +++ + +  +  +  +
Sbjct: 267 LKAEQLRLALAFLVIIVCMRLAFQLFIRPD 296



 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 105/308 (34%), Gaps = 58/308 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + ++I    + G  SGLFG+GGG ++ P+L           +I   +
Sbjct: 1   MSIYLPIAELSLSMLILISMGAVVGFFSGLFGIGGGFLITPLLIFY--------NIPPTI 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+GT    +  +SV   + H +  T+++K+    +    I ++V   + S +        
Sbjct: 53  AVGTGANQVIASSVTGAITHFKKRTLDIKLGILLVIGGGIGSLVGIQVFSLLR-KLGQLD 111

Query: 130 FAIFCLLMGIL--------------MLKRDRLYCERKFPDNYVKYI-------------- 161
           F I  L + +L              M++R +          Y  +I              
Sbjct: 112 FMISLLYVFLLGSIGSLMMVESLCAMMRRCKKEKVTSHSPRYYNWIDRLPFKVYFQASMI 171

Query: 162 ---------WGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
                     G V G LS  +GVGGG  T   +++           TS      ++    
Sbjct: 172 YVSIIPVLGIGFVVGLLSSIMGVGGGFITVPALIYLLHVPTSVVVGTSLFQMTFVSAFTT 231

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +++  S              V+I    ++     +      +    +  + L +  + ++
Sbjct: 232 VLQSVSNQS-----------VDIVLAFLLTIGGGIGAQYGVRTGQKLKAEQLRLALAFLV 280

Query: 272 FTTSFVFA 279
                  A
Sbjct: 281 IIVCMRLA 288


>gi|308272286|emb|CBX28892.1| hypothetical protein N47_B20380 [uncultured Desulfobacterium sp.]
          Length = 354

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 97/293 (33%), Gaps = 56/293 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  + +  F+ G +SG  G GG  V+ P +            +   VA+ +++    P +
Sbjct: 19  IVFLFIVGFIGGLVSGFIGSGGAFVLTPGMMSL--------GVPATVAVASNMCHKFPKA 70

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--------DKSFLNKAFAIFC 134
           ++   +  ++G +++K+             V   + +++           +++ +F +  
Sbjct: 71  MVGAYKRFKYGQVDIKLGLVMAASAIGGVQVGIQIQNYILNKWGEAGSNLYVSLSFVVIL 130

Query: 135 LLMGILMLKR----------------------------DRLYCERKFPDNYVKYIWGMVT 166
           +L+G  +                                           +     G  T
Sbjct: 131 VLVGGYVFYDAWKISKTGGVEKVTGLAQKLQSINLPPMIHFKKANLRISLWFTVPVGFAT 190

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G L+  + VGG I    ++   GAS   A+AT   ++ ++     +     G        
Sbjct: 191 GMLAATIAVGGFIGVPGMIYVIGASSIIASATELVIAFVMGLGGSVNWAIHGM------- 243

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                ++I   LIIL  S+L   L    +  +    + I    IM   +   A
Sbjct: 244 -----IDIRLTLIILAGSLLGVQLGAIGTTYVKDHMIKIVMGTIMLLVAISRA 291



 Score = 37.0 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 47/133 (35%), Gaps = 8/133 (6%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
           N   M+   K  +   +   +   F +G L+    VG G + VP +        I     
Sbjct: 164 NLPPMIHFKKANLRISLWFTVPVGFATGMLAATIAVG-GFIGVPGMIYVIGASSI----- 217

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
             +A  T L +     +   +    HG I++++    +    +   + ++  ++V    +
Sbjct: 218 --IASATELVIAFVMGLGGSVNWAIHGMIDIRLTLIILAGSLLGVQLGAIGTTYVKDHMI 275

Query: 127 NKAFAIFCLLMGI 139
                   LL+ I
Sbjct: 276 KIVMGTIMLLVAI 288


>gi|253577602|ref|ZP_04854913.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Paenibacillus
           sp. oral taxon 786 str. D14]
 gi|251843020|gb|EES71057.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Paenibacillus
           sp. oral taxon 786 str. D14]
          Length = 153

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 13/107 (12%)

Query: 161 IWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           + G +TG LSG  G+G        LML  G S+  A  T+  V   IA       I    
Sbjct: 45  LVGFITGALSGLFGIGSTPFIQLGLMLLLGMSMRYAAGTTMLVIMPIALAGGAGYI---- 100

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
                   ++G++++  +  ++  ++    +  KL+  +   +L   
Sbjct: 101 --------TIGYLDVQLLATVVIGTMTGAYIGAKLTKRVPAAWLKTC 139



 Score = 43.9 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 7/101 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +  F++G LSGLFG+G               + +   + M  A GT++ VI P ++    
Sbjct: 45  LVGFITGALSGLFGIG-------STPFIQLGLMLLLGMSMRYAAGTTMLVIMPIALAGGA 97

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
            +   G +++++L   +        + + +   V  ++L  
Sbjct: 98  GYITIGYLDVQLLATVVIGTMTGAYIGAKLTKRVPAAWLKT 138


>gi|51244905|ref|YP_064789.1| hypothetical protein DP1053 [Desulfotalea psychrophila LSv54]
 gi|50875942|emb|CAG35782.1| hypothetical membrane protein [Desulfotalea psychrophila LSv54]
          Length = 250

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 54/263 (20%), Positives = 92/263 (34%), Gaps = 32/263 (12%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++Y   I +   L G ++G  G G  L+ +P+++           + MH+A+     V  
Sbjct: 3   IEYYIFIAICWGLGGVITGFAGFGAALIAMPIIAMV---------VPMHIAVPCGTIVAF 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++     + RH  I+ K L   +   P            VD ++L     I      I
Sbjct: 54  FMNIQMIRNYWRH--IDWKRLLPMVCATPFGAFTGVSFARSVDGAYLQLGLGILLACFSI 111

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG---GGIFTNLLMLFYGASIYKAT 196
             L  +     R      V   WG++ GF S A+G     GG  T +     G S  +  
Sbjct: 112 WALLFEERKERR-----PVHRAWGVLAGFSSSAIGSSIGMGGPPTIVFTSLSGWSKDRIK 166

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A  +G   +     L  +I++G                   L+   +SI    L  +L  
Sbjct: 167 AGISGYFLVAGAVMLSFQIWAGLQNTSA-------------LLAACVSIPTIYLGIRLGI 213

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
            + KK     +   +F    +FA
Sbjct: 214 NLSKKVGERSYRKNLFRMLILFA 236


>gi|134299286|ref|YP_001112782.1| hypothetical protein Dred_1427 [Desulfotomaculum reducens MI-1]
 gi|134051986|gb|ABO49957.1| protein of unknown function DUF81 [Desulfotomaculum reducens MI-1]
          Length = 428

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 99/290 (34%), Gaps = 66/290 (22%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +     +G ++G  G GGG V+ P L            +   +A+GT    I   ++M  
Sbjct: 78  MAVGVCAGLITGCIGAGGGFVITPALMSL--------GVKGILAVGTDQFHIFAKAIMGT 129

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-------DKSFLNKAFAIFCLLMGI 139
           + H++ G +N+ +   ++    I       +   +           ++  + +    +G 
Sbjct: 130 VIHKKLGNVNVSLAIAFLVGSGIGVTGGGTLNRALFNANPVMSDFVISTIYVVILGFLGF 189

Query: 140 LML---------------------------------------KRDRLYCERKFPDNYVKY 160
             +                                         + +    +    +   
Sbjct: 190 YSMYDFLKTRGQIDKGDAHGGPVGMTGLARKLQSINLAPMIKFDEEITPGGRKISGWFVT 249

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
           + G VTGFL+  +GVGGG  T  + ++             GVS+       +++I    G
Sbjct: 250 LCGCVTGFLAAIMGVGGGFVTFPMFVY-----------GLGVSSFTTVGTDILQIIFTAG 298

Query: 221 LNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            + +  +++ G++     + +L  S+L   +    + ++   Y+   +++
Sbjct: 299 YSSITQYAIYGYIFYTLAMGMLVGSLLGIQIGAATTKVVPGIYIRAFYAI 348



 Score = 43.1 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 8/113 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + +   ++G L+ + GVGGG V  P+      +            +GT +  I  T+ 
Sbjct: 246 WFVTLCGCVTGFLAAIMGVGGGFVTFPMFVYGLGVSSFTT-------VGTDILQIIFTAG 298

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            S +     +G I   +    +    +   + +     V   ++   +AI  +
Sbjct: 299 YSSITQYAIYGYIFYTLAMGMLVGSLLGIQIGAATTKVVPGIYIRAFYAIAIM 351


>gi|109947413|ref|YP_664641.1| hypothetical protein Hac_0860 [Helicobacter acinonychis str.
           Sheeba]
 gi|109714634|emb|CAJ99642.1| conserved hypothetical protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 255

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 70/204 (34%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  + 
Sbjct: 1   MDIYGLYIAIGLFTGILSGIFGI--------GGGMIIVPIMLAIGHSFEESIGISILQMV 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++            I    + L++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSSGLLIGVGGLIGASFSGLILKIVSSKILMVVFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +         ++ G +TG  +  LG+GGG+    LM ++ G    
Sbjct: 113 QFILKPKKQDSITDAKHHHLQGLKLFLIGTLTGLFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       IY 
Sbjct: 173 KCVALGLFFILFSSTSGAFSLIYH 196


>gi|260662012|ref|ZP_05862908.1| permease [Lactobacillus fermentum 28-3-CHN]
 gi|260553395|gb|EEX26287.1| permease [Lactobacillus fermentum 28-3-CHN]
          Length = 246

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 79/197 (40%), Gaps = 12/197 (6%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ TSL    P      +   RHG +N+K+ + +++    T +V SL+  ++ +      
Sbjct: 44  AVDTSLLTAIPALCFGALSFYRHGNVNVKLARQFLYFALPTVIVASLLARYIPEKIYAPL 103

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
             +  +++G+ M  R     E    D      + +++G + G  G+ GG      +L  G
Sbjct: 104 IGLVLVVLGVQMYFRKVRQTEDIHVDRVKAAYYAILSGLMIGTGGLSGGGVIMAGLLVMG 163

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +    ATS+ +    +    ++ + SG           G     A+L+I+  S+    
Sbjct: 164 EDMLGTVATSSFILVWTSLIGAVMHMTSG-----------GVSYFYALLLII-GSVTGAL 211

Query: 250 LATKLSYMIGKKYLTIG 266
           +A ++   + +      
Sbjct: 212 IAPRVLSRVNRATFDRI 228


>gi|169829875|ref|YP_001700033.1| hypothetical protein Bsph_4452 [Lysinibacillus sphaericus C3-41]
 gi|168994363|gb|ACA41903.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
          Length = 248

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 82/248 (33%), Gaps = 22/248 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++    ++  +  L G GGGL+ +P +            I +  ++ T+      +++
Sbjct: 9   LTLVCIGIIAAFIGTLAG-GGGLMTLPAMMLV--------GIPIQTSIATNKFSTGISAL 59

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S      H  ++ K++  +I +  I     +L+     +  +N    I  +   ++ LK
Sbjct: 60  SSIFYLLYHKELHFKVILKYIAIAVIGGAGGALLAVSQSEQNMNVTACILLIFALVVTLK 119

Query: 144 RDRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
                      ++    +W         G  G G   F+ L       +  KA   +  +
Sbjct: 120 NKAWTDTVNPTEHTTSSLWQPFFIAMYDGGFGPGSSTFSILYYWRCQHTYIKAVQLTRAL 179

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
                  A +V             +  GF+     + +   SI+ + L   +   I  K 
Sbjct: 180 LFGSCTGAFIVF------------YQTGFIQWHYAIAMALGSIIGSQLGLLVLPHIPIKV 227

Query: 263 LTIGFSMI 270
                ++I
Sbjct: 228 AKRLLTVI 235


>gi|315446312|ref|YP_004079191.1| permease [Mycobacterium sp. Spyr1]
 gi|315264615|gb|ADU01357.1| predicted permease [Mycobacterium sp. Spyr1]
          Length = 256

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 41/97 (42%), Gaps = 7/97 (7%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           ++P L            + M  A+GTSL +I   SV     H +  +++ ++   ++   
Sbjct: 162 IIPALVVVL-------GVEMSTAIGTSLLIIIANSVAGIFSHLQSISVDWQVTGLFVAAA 214

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +T+++   + +  D   L + FA    ++   +L  
Sbjct: 215 MVTSLIAGYVGTKTDTERLQRWFAYLVFVVAGYVLID 251



 Score = 37.7 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 83/242 (34%), Gaps = 39/242 (16%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     L G++ +I +      SL V+A  S +  +   R   +  ++   +     
Sbjct: 28  VPALVYGLDL-GVEQAIPI------SLIVVAAASAVGVLPKIRARQVRWRMAGIFSAAGI 80

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML------------KRDRLYCERKFPDN 156
             T+  S +  H+ +S L   FA   ++ GI ML            +   +   R  P +
Sbjct: 81  PATLAGSAISRHLPESALLIGFAAVMVVAGIRMLTDQSSTGTACEIREGEVNWRRCAPRS 140

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR-- 214
               +   +   L G  G    +    L++  G  +  A  TS  +    +   +     
Sbjct: 141 IGAGLVVGLLTGLFGVGGG--FLIIPALVVVLGVEMSTAIGTSLLIIIANSVAGIFSHLQ 198

Query: 215 -IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            I   W + GL                +  +++ + +A  +      + L   F+ ++F 
Sbjct: 199 SISVDWQVTGL---------------FVAAAMVTSLIAGYVGTKTDTERLQRWFAYLVFV 243

Query: 274 TS 275
            +
Sbjct: 244 VA 245


>gi|31980100|emb|CAD98781.1| hypothetical protein [Sinorhizobium fredii]
          Length = 231

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 70/211 (33%), Gaps = 16/211 (7%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+       S  + + + RHG +N+K       +    +V  +L+ + V    L    
Sbjct: 18  LGTNKLQSLFGSGSASIAYARHGHVNLKDQLPMALMSAAGSVFGALIATVVPADALKGVL 77

Query: 131 AIFCLLMGILMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LML 186
               + + +    +  +      R+         +  + G   G  G G G F  L  + 
Sbjct: 78  PFLLIAIAVYFGCKPNIGDVEKHRRMSAFLFTLTFVPLIGLYDGIFGPGTGSFFMLGFVS 137

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
             G  I KATA +  ++      A LV +  G             V     L++     L
Sbjct: 138 LAGYGILKATAHTKFLNFGSNLGAFLVFVLYGV------------VLWKVGLMMGAGQFL 185

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              + ++ +   G K +     ++    +  
Sbjct: 186 GAQVGSRYAMAKGAKIIKALLVVVSIALAIR 216


>gi|125973729|ref|YP_001037639.1| hypothetical protein Cthe_1214 [Clostridium thermocellum ATCC
           27405]
 gi|256005531|ref|ZP_05430492.1| conserved hypothetical protein [Clostridium thermocellum DSM 2360]
 gi|281417886|ref|ZP_06248906.1| protein of unknown function DUF81 [Clostridium thermocellum JW20]
 gi|125713954|gb|ABN52446.1| conserved hypothetical protein [Clostridium thermocellum ATCC
           27405]
 gi|255990511|gb|EEU00632.1| conserved hypothetical protein [Clostridium thermocellum DSM 2360]
 gi|281409288|gb|EFB39546.1| protein of unknown function DUF81 [Clostridium thermocellum JW20]
 gi|316940077|gb|ADU74111.1| protein of unknown function DUF81 [Clostridium thermocellum DSM
           1313]
          Length = 126

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
            H+A   +L    PT+V++ + H ++  +N K+    +    +   + S +   +  + L
Sbjct: 36  QHIAQSVNLLFFIPTAVIALIVHIKNKRVNFKLTIPIVIFGLVGAFLGSKLAVSLSGASL 95

Query: 127 NKAFAIFCLLMGIL-MLKRDRLYCERK 152
            + F +F L++G   M+++D+   +++
Sbjct: 96  KRYFGMFLLILGFYEMVRKDKKETKKQ 122


>gi|313903701|ref|ZP_07837090.1| protein of unknown function DUF81 [Thermaerobacter subterraneus DSM
           13965]
 gi|313465889|gb|EFR61414.1| protein of unknown function DUF81 [Thermaerobacter subterraneus DSM
           13965]
          Length = 331

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 44/115 (38%), Gaps = 6/115 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++V   L G +  L G GGG +++PVL+  +               G SL V+A  ++  
Sbjct: 6   LVVLGVLVGAIGTLIGAGGGFLLIPVLALLYPTDDPGTL------TGISLLVVAVNALSG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            + + R G I+ +    +        V+ + + + + +           +   + 
Sbjct: 60  SIAYARMGRIDFRAGAWFAAAAIPGAVLGAWVSTVMSRRLFEALLGTLMVAAAVW 114



 Score = 43.9 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 9/118 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +  SFL G +S L G+GGG++ VP+L              +HVA  TS  V+A T     
Sbjct: 215 MALSFLVGIVSSLLGIGGGIIHVPLLVAVL-------DYPVHVATATSHFVLALTGWAGV 267

Query: 87  MEHRRHGTINMKILKD--WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             H   GT +  + +       +     V +L+   VD  ++ +A A+  LL G+ +L
Sbjct: 268 AVHAWAGTYHHGLHRAALLAAGVIPGAQVGALLSRRVDDRWILRALALALLLAGVRVL 325



 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 11/105 (10%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
                + G +S  LG+GGGI    L++      ++ ATATS  V AL  +  + V  ++G
Sbjct: 215 MALSFLVGIVSSLLGIGGGIIHVPLLVAVLDYPVHVATATSHFVLALTGWAGVAVHAWAG 274

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
              +GL   +L          +    I    +   LS  +  +++
Sbjct: 275 TYHHGLHRAAL----------LAAGVIPGAQVGALLSRRVDDRWI 309


>gi|270290496|ref|ZP_06196721.1| conserved hypothetical protein [Pediococcus acidilactici 7_4]
 gi|270281277|gb|EFA27110.1| conserved hypothetical protein [Pediococcus acidilactici 7_4]
          Length = 260

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 93/262 (35%), Gaps = 22/262 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++      +    + TL  + G+GGG+++ P+         +       ++  +++ V  
Sbjct: 1   MNIGITYFLIIIFANTLGAISGMGGGILIKPLFDF------VGHDSVAAISFYSAIAVFT 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV----DKSFLNKAFAIFCL 135
              V +F + +    +N            +  +  + +++ +              I   
Sbjct: 55  MAVVSTFKQIKDGTQLNWNFANWIAGGAAVGGMFGNSLLNFLLQLFPNERHVTMIQIVLT 114

Query: 136 LMGILMLKR--DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASI 192
           ++ I        R     +   NY     G++ G  +  LG+GGG     L+ L +   +
Sbjct: 115 ILSIFFSLGVTTRKKANFRLAGNYWYCFSGLILGICASFLGIGGGPINVALLILLFNIPL 174

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +AT  S  +        L+    +G   +         +N   ++ I+P +IL   L  
Sbjct: 175 KEATVYSICIILFSQGFKLINITMTGDFSS---------INFYQLIFIIPAAILGGYLGA 225

Query: 253 KLSYMIGKKYLTIGFSMIMFTT 274
             S  +  KY+ + F +++   
Sbjct: 226 LFSKFMLTKYVAMLFQIMLLIV 247



 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 10/118 (8%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
               +  + G  +   G+GGG + V +L   F       +I +  A   S+ +I  +   
Sbjct: 139 WYCFSGLILGICASFLGIGGGPINVALLILLF-------NIPLKEATVYSICIILFSQGF 191

Query: 85  SFMEHRRHG---TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +     G   +IN   L   I    +   + +L    +   ++   F I  L++ I
Sbjct: 192 KLINITMTGDFSSINFYQLIFIIPAAILGGYLGALFSKFMLTKYVAMLFQIMLLIVVI 249


>gi|255525923|ref|ZP_05392850.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
 gi|255510417|gb|EET86730.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
          Length = 128

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 7/121 (5%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I L I+   L+G LSG+ G+GGG +MV +             I  H A   +L  I PT
Sbjct: 2   FIVLSILTGILTGILSGMLGIGGGAIMVAITVSLLH-------ISQHTAQAAALAAIIPT 54

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + +   +H ++G +N K+         +   + S   + ++ + L K F++F  ++GI +
Sbjct: 55  AFVGATKHHKNGLLNYKVGIYLAIGGIVGGFIGSNFANSLNDNMLCKVFSVFFAVIGIQL 114

Query: 142 L 142
           L
Sbjct: 115 L 115


>gi|303242596|ref|ZP_07329072.1| protein of unknown function DUF81 [Acetivibrio cellulolyticus CD2]
 gi|302589853|gb|EFL59625.1| protein of unknown function DUF81 [Acetivibrio cellulolyticus CD2]
          Length = 131

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 42/94 (44%), Gaps = 1/94 (1%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
            H+A   +L    PT+V++ + H R+  ++ K+    I    +   + S +   +    L
Sbjct: 36  QHIAQSVNLIFFIPTAVIALIVHIRNKRVDFKVAIPIIIFGLLGAYLGSRLAIRLPGIVL 95

Query: 127 NKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVK 159
            K F  F L++G+  ++++D+     K      +
Sbjct: 96  KKYFGFFLLVLGVCEIIRKDKQKVSEKKLRQAGQ 129


>gi|315427086|dbj|BAJ48702.1| hypothetical protein HGMM_F40F12C27 [Candidatus Caldiarchaeum
           subterraneum]
 gi|315427118|dbj|BAJ48733.1| hypothetical protein HGMM_F05B08C14 [Candidatus Caldiarchaeum
           subterraneum]
          Length = 250

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 77/201 (38%), Gaps = 9/201 (4%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++ +F S  +  + GVGGG V VPV                 VA+  SL ++   +  +
Sbjct: 9   VVLLAFFSALVGSMLGVGGGFVFVPVSVGIMGFRPF-------VAVPASLSLVLSNAFSA 61

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            +        N++     I      +V+ +L  + ++       F  F L   +L+LK  
Sbjct: 62  TLTRLMKKAFNLRPNLWLILPASGLSVLGALTSARLEAPVFKIMFGTFLLGSSLLLLKTR 121

Query: 146 RLYCERKFPDNYVKYIWGMV-TGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVS 203
               +        + +  +V  GF+S  LGVGGG+      +L    S  ++ A S  ++
Sbjct: 122 GEQEQGHSRGFAGRRLVVVVAAGFISSLLGVGGGLLMVPGFILLSKMSSRESVAVSQFIT 181

Query: 204 ALIAFPALLVRIYSGWGLNGL 224
              +   L   +  G     L
Sbjct: 182 GFTSATGLATYLLQGSFFPSL 202


>gi|25026695|ref|NP_736749.1| hypothetical protein CE0139 [Corynebacterium efficiens YS-314]
 gi|23491974|dbj|BAC16949.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 321

 Score = 50.1 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 92/232 (39%), Gaps = 17/232 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++I  + ++G +  + G GGGLV++P++            +    A+  +       + 
Sbjct: 72  AVLIAGAAVAGWIDAVIG-GGGLVLIPLILAVM------PQLAPVTALAVNKVAAVTGTA 124

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + +   R     +K+L  ++ V  + + + +L  S +DK  +     +  L++G+ +  
Sbjct: 125 SAAVTMVRRVRPPLKLLAIYVPVALVCSGLGALAASSLDKQVMRPLIIVLMLVVGVFVAF 184

Query: 144 RDRLYC--ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           R        R  P  +  ++     G ++G  G+ G      L++ + A + +   TSA 
Sbjct: 185 RPSFGTGESRDLPTGWRLWMAIGAVGLIAGYDGIFGPGTGMFLIMAFTALLSQNFLTSAA 244

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           ++ ++     +  +            + G V     L++   +++   L  +
Sbjct: 245 MAKVVNTSTNVGALIV--------FITGGHVWWQLALVLAVANVVGAQLGAR 288


>gi|256846114|ref|ZP_05551572.1| membrane protein [Fusobacterium sp. 3_1_36A2]
 gi|256719673|gb|EEU33228.1| membrane protein [Fusobacterium sp. 3_1_36A2]
          Length = 254

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 93/263 (35%), Gaps = 27/263 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++ V  F++  +  + G GGGL+ +P         G       H+A+GT+      ++
Sbjct: 8   FLILAVFCFIAAVVDAISG-GGGLISLPAYFAV----GFPP----HIALGTNKLSAFLST 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S  +  +   +N++I+           V+       +D  +         +L+ +  L
Sbjct: 59  FASAFKFWKAKKVNVEIVSKLFVFSLAGAVLGVKTAVSIDSKYFKPISFGILILVFLYAL 118

Query: 143 KRDRLYCERKFPDNYVKYIW-----GMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
           K   L  +  +     K I          GF  G LG G   F    ++  +      A+
Sbjct: 119 KNKSLGEKNYYKGTTHKTIILGKIMAFCLGFYDGFLGPGTAAFLMFCLIKIFKLDFSSAS 178

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++    F +L+V  +            LG +N    L I  +      + ++L+ 
Sbjct: 179 GNTKILNLSSNFASLVVFAF------------LGKLNWVYGLSIAVVMTFGAIIGSRLAI 226

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
           + G K++   F ++        +
Sbjct: 227 LKGNKFIKPVFLVVTVVLILKMS 249


>gi|255522176|ref|ZP_05389413.1| hypothetical protein LmonocFSL_13320 [Listeria monocytogenes FSL
           J1-175]
          Length = 191

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  SGL G+G G   V         + +   + + V+  TS  ++  T+  S   +   
Sbjct: 82  AGIASGLLGIGSGAFKV-------MALDVFMKMPLKVSSATSNLMMGVTAAASATVYLFQ 134

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           G I   I       + +   + + ++  +    +   F    L +   M+ 
Sbjct: 135 GDIQPAIAAPVAIGVLVGATLGTRIMQRLKSKVIRIIFIPVILYVAFQMIL 185



 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 41/194 (21%)

Query: 114 TSLMISHVDKSFLNKAFAIFCLLMGILMLKR----------------------------D 145
            + +   +  + L   F +  L     M+K+                             
Sbjct: 2   GAFVSGLLSATALYIIFGLLLLYSAFNMIKKVGTEFPTNVKPDPLATKLNLHDSYYDKSL 61

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSA 204
           R   + +  +    +      G  SG LG+G G F  + + +F    +  ++ATS  +  
Sbjct: 62  RQTVDYQVANVPAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSATSNLMMG 121

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           + A  +  V ++ G     +               +    ++   L T++   +  K + 
Sbjct: 122 VTAAASATVYLFQGDIQPAI------------AAPVAIGVLVGATLGTRIMQRLKSKVIR 169

Query: 265 IGFSMIMFTTSFVF 278
           I F  ++   +F  
Sbjct: 170 IIFIPVILYVAFQM 183


>gi|226359451|ref|YP_002777228.1| hypothetical protein ROP_00360 [Rhodococcus opacus B4]
 gi|226237935|dbj|BAH48283.1| hypothetical membrane protein [Rhodococcus opacus B4]
          Length = 257

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 7/116 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I A+ L G L+GLFGVGGG +++P L            + M VA+GTSL +I   S    
Sbjct: 142 IPAAALVGFLTGLFGVGGGFLIIPALVLML-------GLEMPVAIGTSLVIIVANSAAGL 194

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + H    +I+  I   +       +++ S   + VD   L + FA    ++   +L
Sbjct: 195 ISHLSGASIDWAITAAFAGTAIAGSLIASHFGTRVDTDRLQRWFAYLVFVVAAYVL 250



 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 78/239 (32%), Gaps = 29/239 (12%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     L G++++I +      SL VI   S++  +   R   +N ++   +     
Sbjct: 29  VPALVFGLGL-GLEEAIPI------SLIVIGVASLVGAIPKIREHQVNWRMAGVFAACGI 81

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD---------NYVK 159
             T   S +   + +  +   FA   ++ GI ML                          
Sbjct: 82  PATFAGSAVGRLLPQPVVMIGFAAVMIVAGIRMLMDRGDTGTACEVGDSGIDWRRCAPRS 141

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
                + GFL+G  GVGGG      ++   G  +  A  TS  +    +   L+  +   
Sbjct: 142 IPAAALVGFLTGLFGVGGGFLIIPALVLMLGLEMPVAIGTSLVIIVANSAAGLISHLSGA 201

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                        ++          +I  + +A+     +    L   F+ ++F  +  
Sbjct: 202 S------------IDWAITAAFAGTAIAGSLIASHFGTRVDTDRLQRWFAYLVFVVAAY 248


>gi|51245366|ref|YP_065250.1| hypothetical protein DP1514 [Desulfotalea psychrophila LSv54]
 gi|50876403|emb|CAG36243.1| hypothetical protein DP1514 [Desulfotalea psychrophila LSv54]
          Length = 285

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 87/259 (33%), Gaps = 23/259 (8%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++       +  F SG + GL G G  L+ VP+L     L           A+ T++ +
Sbjct: 32  AMLSLTLTASLIYFFSGFIQGLTGFGNALIAVPLLLLYMPLQP---------AVVTTVLM 82

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
               ++    +++++  ++ +I +  I  +P+   + S  +  V    L +   +   L+
Sbjct: 83  SVVMNIQLAFKYKKY--VDWQITRPLILAMPLGVALGSYFLGSVSPEILEQL--LALFLL 138

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
             ++          +      KY+ G+  G  +      G  F  + +   G        
Sbjct: 139 AYVVYSSSGRGKSFELKSPIWKYLVGIGGGLTTSIFAAAG-PFLIVYLNLIGCKRDTFKG 197

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
             A     +     +  +++G     +   SL  V +        + +        LS  
Sbjct: 198 ILAICFVFVTSVTAMSYLFTGLVTTTV--LSLAAVCLP-------VQLFGAWAGASLSKF 248

Query: 258 IGKKYLTIGFSMIMFTTSF 276
           +  +Y  +   +++     
Sbjct: 249 VSDRYFKVIVMLLLCAMGL 267


>gi|119718639|ref|YP_925604.1| hypothetical protein Noca_4420 [Nocardioides sp. JS614]
 gi|119539300|gb|ABL83917.1| protein of unknown function DUF81 [Nocardioides sp. JS614]
          Length = 298

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 62/202 (30%), Gaps = 15/202 (7%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS++S   H R G ++ + +        +     +  ++ VD        A   L +G
Sbjct: 52  IGTSLVSGFSHHRLGNVDWRTVSILALPGFVGAFAGATFLAGVDGDTAKPWVAAILLGLG 111

Query: 139 ILML-----KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASI 192
             ++        R    +  P        G+V G L    G G G      +L  G    
Sbjct: 112 GYVIWRFLVLGGRRPTFKARPSARFLAPMGLVGGALDAIGGGGWGPVGTTTLLSSGRLEP 171

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            K   +      ++A    L  I +              +       +L   ++  P+A 
Sbjct: 172 RKVIGSIDTSEFVVAVGGSLGFILALGSQG---------IEWSYAGALLAGGVVAAPIAA 222

Query: 253 KLSYMIGKKYLTIGFSMIMFTT 274
            L   +  + L +    ++  T
Sbjct: 223 WLVKRLAARVLGVAAGGLIVLT 244


>gi|150021365|ref|YP_001306719.1| hypothetical protein Tmel_1487 [Thermosipho melanesiensis BI429]
 gi|149793886|gb|ABR31334.1| protein of unknown function DUF81 [Thermosipho melanesiensis BI429]
          Length = 243

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 104/260 (40%), Gaps = 24/260 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  L+ V+   +G ++ L G GG ++ +P+LS           + + VA GT+   I   
Sbjct: 2   FYLLLFVSGIGAGFVNVLAG-GGSMLTLPILSLM--------GLDLSVANGTNRVGILLQ 52

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +V+S +   ++     K          I  +  +  + +++K  L K   I  L M   +
Sbjct: 53  NVVSSINFHKNKVFKAKEAIFLAIPATIGAIFGTFTVLNINKDILEKIVGIIFLFMSFFI 112

Query: 142 LKRDR-LYCERKFPDNYVKYIWGMVT-GFLSGALGVGGGIFTNLLMLFY-GASIYKATAT 198
           L + +     +K   NY+   +     GF  G +  G G F    ++F  G  I K  A 
Sbjct: 113 LYKPKVWEEGKKVKKNYLISFFVFFIVGFYGGFIQAGVGFFLIASLVFVEGNDIIKTNAL 172

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
              +       + ++ + +G             V+I   +I+   +++   + TK +   
Sbjct: 173 KVFIVLCYTSFSFIIFLTNGK------------VDILKGIILATGTMVGAKIGTKATLKS 220

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
           G K++ I   +++  ++  +
Sbjct: 221 GAKFVRIVVFIMIIISATKY 240


>gi|78187789|ref|YP_375832.1| hypothetical protein Plut_1947 [Chlorobium luteolum DSM 273]
 gi|78167691|gb|ABB24789.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
          Length = 262

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 44/126 (34%), Gaps = 7/126 (5%)

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR------DRLYC 149
           + +I+ + +    +     +   + +    L K  AI  +++  +M+             
Sbjct: 76  HWQIVMNLLAGSLLGAWTGAGWATKLRSKGLYKIIAILLVVIAAIMISSHMMEGAGSPML 135

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAF 208
           E          + G   G ++  LGV GG +    L++ +G  I  A + S  VS     
Sbjct: 136 ENALLLALSGAVAGFAIGVVAALLGVAGGELLIPTLVILFGVDIKLAGSLSLAVSLPTML 195

Query: 209 PALLVR 214
            +    
Sbjct: 196 VSFTRY 201


>gi|319405220|emb|CBI78825.1| putative membrane protein [Bartonella sp. AR 15-3]
          Length = 304

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 56/150 (37%), Gaps = 8/150 (5%)

Query: 2   YDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI 61
           Y+ +      ++     +   I  ++   F+ G LS + GVGGG + VP L    +    
Sbjct: 154 YNWIGRLPFKIYFQTSMICVSIIPVLGIGFVVGLLSSIMGVGGGFITVPALIYLLR---- 209

Query: 62  DDSICMHVAMGTSLGVIAPTS-VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
              +   V +GTSL  +   S   + ++   + ++++ +         I           
Sbjct: 210 ---VPTSVVVGTSLFQMTFVSAFTTVLQSVSNQSVDIVLALLLTIGGGIGAQYGVRAGQK 266

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           +    L  A A   +++ + +  +  +  +
Sbjct: 267 LKAEQLRLALAFLVIIVCMRLAFQLFIRPD 296



 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 49/308 (15%), Positives = 102/308 (33%), Gaps = 58/308 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + ++I    + G  SGLFG+GGG ++ P+L            I   +
Sbjct: 1   MSIYLPIAELSLSMLILIGMGAVVGFFSGLFGIGGGFLITPLLIFY--------DIPPTI 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+GT    +  +SV   + H +  T+++K+    +    I + +   + S +        
Sbjct: 53  AVGTGANQVIASSVTGAITHFKKRTLDVKLGILLVIGGGIGSFIGIQVFSLLR-KVGQLD 111

Query: 130 FAIFCLLMGI---------------LMLKRDRLYCERKFPDNY----------------- 157
           F I  L + +               +M + ++       P  Y                 
Sbjct: 112 FIISLLYVLLLGSIGSLMMVESLCTMMRQHEKKEITPHLPSYYNWIGRLPFKIYFQTSMI 171

Query: 158 -----VKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
                     G V G LS  +GVGGG  T   +++           TS      ++    
Sbjct: 172 CVSIIPVLGIGFVVGLLSSIMGVGGGFITVPALIYLLRVPTSVVVGTSLFQMTFVSAFTT 231

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +++  S              V+I   L++     +      +    +  + L +  + ++
Sbjct: 232 VLQSVSNQS-----------VDIVLALLLTIGGGIGAQYGVRAGQKLKAEQLRLALAFLV 280

Query: 272 FTTSFVFA 279
                  A
Sbjct: 281 IIVCMRLA 288


>gi|260578321|ref|ZP_05846237.1| permease [Corynebacterium jeikeium ATCC 43734]
 gi|258603623|gb|EEW16884.1| permease [Corynebacterium jeikeium ATCC 43734]
          Length = 264

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 88/249 (35%), Gaps = 25/249 (10%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  +   + I L+ V SF++G +  + G GGGLV++P++           ++        
Sbjct: 1   MLAELSAEAISLLAVGSFIAGLIDAIVG-GGGLVLIPLILIVAPATPEASAMA-----AN 54

Query: 74  SLGVIAPTSVMSF---MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
            L  +  TS  +            I+ +++   + +  +     +L+++ +    L    
Sbjct: 55  KLAAVFGTSSAAARMLRASDVRQKIDRRLVAYGVPLAFVCAASGALLVAALSSEVLRPLV 114

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDN-----YVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
            I  L +G  +  +      +  P        +            G  G G G F  ++ 
Sbjct: 115 IILLLAVGTYVALKPSFGTPQSAPSQSHRRWLIALFAVGAIAAYDGFFGPGTGTFLIIVF 174

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                 + ++   SA +S +I     L  +   + + G  PW LG       L +   ++
Sbjct: 175 TAL---LSRSFVESAALSKIINTATNLGALTV-FAIGGHVPWLLG-------LGLAVFNV 223

Query: 246 LITPLATKL 254
               +  +L
Sbjct: 224 AGAQIGARL 232


>gi|224824367|ref|ZP_03697475.1| protein of unknown function DUF81 [Lutiella nitroferrum 2002]
 gi|224603786|gb|EEG09961.1| protein of unknown function DUF81 [Lutiella nitroferrum 2002]
          Length = 257

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 84/247 (34%), Gaps = 38/247 (15%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L       GI  +     A+GT L   A T     M H R   ++  I +     
Sbjct: 26  LMTPILVW----FGIPPAT----AVGTDLLYAAITKAGGVMIHHRQRHVDWGITRRLATG 77

Query: 107 LPITTVVTSLMISHVD------KSFLNKAFAIFCLLMGILMLKRD----------RLYCE 150
                ++T   +S +D       + +  +     +L  + +L +               +
Sbjct: 78  SLPAALLTLFALSRIDLPTATINAVIKVSLGAALILTALAILFKPLLVKLAHRINPSLLD 137

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN--LLMLFYGASIYKATATSAGVSALIAF 208
                     + G++ G L     +G G      L +L+      +   T    +  +  
Sbjct: 138 ESRSRTVPTVLIGVMLGVLVTLSSIGAGALGTLALFLLYPVLPTTRLVGTEIAHAVPLTL 197

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            A +               SLG ++ G ++ +L  S+    + ++L+  + ++++    +
Sbjct: 198 VAGIGHA------------SLGNLDYGLLVNLLMGSLPGIWIGSRLTKKMAERWMRPALA 245

Query: 269 MIMFTTS 275
           +++    
Sbjct: 246 IMLAIVG 252


>gi|226349569|ref|YP_002776683.1| hypothetical membrane protein [Rhodococcus opacus B4]
 gi|226245484|dbj|BAH55831.1| hypothetical membrane protein [Rhodococcus opacus B4]
          Length = 257

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 7/116 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I A    G L+GLFGVGGG +++P L     L        M VA+GTSL +I   S    
Sbjct: 142 IPAGVAVGFLTGLFGVGGGFLIIPALVLMLGLD-------MSVAVGTSLVIIVANSAAGL 194

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + H    +I+  I   +       +++     + VD   L + FA    ++   +L
Sbjct: 195 VSHLSGASIDWAITAAFAGTAIAGSLIAGHFGTKVDTDKLQRWFAYLVFVVAAYVL 250



 Score = 42.4 bits (99), Expect = 0.064,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 75/239 (31%), Gaps = 29/239 (12%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     L        +  A+  SL VI   S++  +   R   +N ++   +     
Sbjct: 29  VPALVFGLGLD-------LEQAIPISLLVIGVASLVGAIPKIREHQVNWRMAGVFAACGI 81

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD---------NYVK 159
             T   S +   + +S +   FA   +L GI ML                          
Sbjct: 82  PATFAGSAVGRLLPQSVVMVGFAAVMVLAGIRMLMDRGDTGTACEVGDSGIDWRRCAPRS 141

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
              G+  GFL+G  GVGGG      ++   G  +  A  TS  +    +   L+  +   
Sbjct: 142 IPAGVAVGFLTGLFGVGGGFLIIPALVLMLGLDMSVAVGTSLVIIVANSAAGLVSHLSGA 201

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                        ++          +I  + +A      +    L   F+ ++F  +  
Sbjct: 202 S------------IDWAITAAFAGTAIAGSLIAGHFGTKVDTDKLQRWFAYLVFVVAAY 248


>gi|119718425|ref|YP_925390.1| hypothetical protein Noca_4206 [Nocardioides sp. JS614]
 gi|119539086|gb|ABL83703.1| protein of unknown function DUF81 [Nocardioides sp. JS614]
          Length = 329

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 100/276 (36%), Gaps = 39/276 (14%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            D +      I+ A F+ G + GL G+GGG +M P L       G+ D+  +  A  T+ 
Sbjct: 2   SDLITTTFFSILAAGFIVGVVVGLTGMGGGALMTPALIFL----GVGDAATVVTADLTAA 57

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS-------FLNK 128
            V         + H R G+ N  + K  I       ++   +I  +           L +
Sbjct: 58  AVY---KSGGAIVHSREGSPNFSLAKWLIIGSVPMALLGPWLIHQIAGEEPESVDTLLKE 114

Query: 129 AFAIFCLLMGILM-------LKRDRLYCERKFPDNYVKYIWGMVTGFLSGA------LGV 175
           A     LL            L+R R       P+  ++ +  +  G L G       +G 
Sbjct: 115 AIGFALLLAAATYALRLYINLRRVRGGAANADPNPPIRPLVTLGVGALGGLLVGVTSVGS 174

Query: 176 GGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           G  I   LLML+ G S  K   T    +  +   A +  I                ++  
Sbjct: 175 GSVIMIALLMLYPGLSAVKLVGTDLVQAVPLVLAAAISNIVING------------LDWE 222

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            ++ ++  S+  T + ++++  + +  +  G  +++
Sbjct: 223 ILIPLVLGSVPGTIIGSRIAPRVPQSVIRRGIVIVL 258



 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 6/129 (4%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           VG G V++  L   +        +     +GT L    P  + + + +     ++ +IL 
Sbjct: 172 VGSGSVIMIALLMLY------PGLSAVKLVGTDLVQAVPLVLAAAISNIVINGLDWEILI 225

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI 161
             +      T++ S +   V +S + +   I   + G+ +L +       K   + V   
Sbjct: 226 PLVLGSVPGTIIGSRIAPRVPQSVIRRGIVIVLTMSGVALLDKSGWAPLGKESTHPVLIA 285

Query: 162 WGMVTGFLS 170
              +   +S
Sbjct: 286 VIGLVLLVS 294


>gi|152991809|ref|YP_001357530.1| hypothetical protein SUN_0213 [Sulfurovum sp. NBC37-1]
 gi|151423670|dbj|BAF71173.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 245

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 94/259 (36%), Gaps = 23/259 (8%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           DY+    +A  LS   S + G G G+ ++PVL+           I   VA  T L   A 
Sbjct: 3   DYLIYSSIAFVLSTVFS-MGGTGSGIALIPVLNFF--------GIEFIVAKATGLFAGAS 53

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T++ S + + +   ++   +     ++ I   + +     +++S +   F +       +
Sbjct: 54  TTITSSIMNIKRKVLDFSFIWPIALMMLIFAPIGAYSSQFINESLVKSLFILLLFYSASM 113

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           M+   +           + +I G   GFL+G LGVGGG     L++  G    K   T +
Sbjct: 114 MIFGKK-KPLTHTKGKAILFIVGAFVGFLAGLLGVGGGNILMPLLILLGFDPKKVAVTVS 172

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY-MIG 259
            V    A  +                 S   ++   ++ ++  SI    +   L +  + 
Sbjct: 173 SVVPFAALSSFFTYA------------SYVKLDWILLICVMLASIAGGYIGNYLMHFKLD 220

Query: 260 KKYLTIGFSMIMFTTSFVF 278
           +         I++  +   
Sbjct: 221 QAKTKKLMGAILYILAIKM 239


>gi|116751341|ref|YP_848028.1| hypothetical protein Sfum_3924 [Syntrophobacter fumaroxidans MPOB]
 gi|116700405|gb|ABK19593.1| protein of unknown function DUF81 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 255

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 82/253 (32%), Gaps = 24/253 (9%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A     T+  + G GGG++ +P L     L           A+ TSL +    +    + 
Sbjct: 11  AGMCIATIVMVVGFGGGILWMPFLLIVLHL-------PTDTAIITSLLIQTAGTGSGSVA 63

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
           +      + ++    + +     +V +     V  S +        L   +L    +  +
Sbjct: 64  YTLQKKTDNRLALLMMSIAIPGVIVGAFFAHRVVPSNIEVIIGAISLATALLFASSNEKF 123

Query: 149 CER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGV 202
            E      +           +V    SG L +    +   +M    G  +  A AT   +
Sbjct: 124 SETGVERVELKRAAGHSWIAVVMAVASGMLTLNIAEWLIPVMRNKMGLRMSNAVATCIVL 183

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
           +    F  +    + G      P W++      A+  I P  I+   +  +L+  I ++ 
Sbjct: 184 TCGECFLGVWTHYFMG----AKPDWAV------ALWGI-PGVIIGGQIGPRLAKGIDERL 232

Query: 263 LTIGFSMIMFTTS 275
           L   F  ++    
Sbjct: 233 LKEIFIFMLTLIG 245



 Score = 39.7 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 41/113 (36%), Gaps = 1/113 (0%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
           ++ +  V  G++ + +      +M     + M  A+ T + +      +    H   G  
Sbjct: 142 IAVVMAVASGMLTLNIAEWLIPVMRNKMGLRMSNAVATCIVLTCGECFLGVWTHYFMGAK 201

Query: 96  -NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            +  +    I  + I   +   +   +D+  L + F     L+G+ ++ +   
Sbjct: 202 PDWAVALWGIPGVIIGGQIGPRLAKGIDERLLKEIFIFMLTLIGVHLVYKYFP 254


>gi|224014684|ref|XP_002297004.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220968384|gb|EED86732.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 522

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 8/90 (8%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
                +F++G ++GL G+GGG+V+ P++     +MGI  S    V+  T+  +I  TS  
Sbjct: 362 FYSFFTFVAGIVAGLIGIGGGMVLGPLML----VMGIHPS----VSTATTASMILLTSSS 413

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVT 114
             +     G +  +    +  V  +   + 
Sbjct: 414 VAVMFVMSGLVPWQYALYFFCVCLVGAYIG 443



 Score = 43.9 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 31/58 (53%)

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           +  V G ++G +G+GGG+    LML  G     +TAT+A +  L +    ++ + SG 
Sbjct: 366 FTFVAGIVAGLIGIGGGMVLGPLMLVMGIHPSVSTATTASMILLTSSSVAVMFVMSGL 423


>gi|330877016|gb|EGH11165.1| hypothetical protein PSYMP_16216 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 248

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 86/229 (37%), Gaps = 16/229 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++     I    I   +T
Sbjct: 29  AIPALGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALMLIIPSFIFAWLT 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGI----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           S++   +D   +   F  F +++ +     M  R+ L       + Y+  +         
Sbjct: 89  SMLAVRIDPQSMRLGFVAFLVVLTVFNVAQMYWRNTLASGGLRHEKYLWLLGVGSGVTGG 148

Query: 171 GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
                GG + T +L   +GA+   A   +  ++A              + L+    WS+G
Sbjct: 149 LFGVGGGVVATPILTSVFGATQVVAQGLALSLAAP-----STGITLVTYALHDHVNWSMG 203

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                  + +    +       KL++ + ++ L + F + +   + + A
Sbjct: 204 -------IPLAVGGLASISWGVKLAHSLPERTLRLMFCVFLVLCAVILA 245


>gi|257065341|ref|YP_003145013.1| predicted permease [Slackia heliotrinireducens DSM 20476]
 gi|256792994|gb|ACV23664.1| predicted permease [Slackia heliotrinireducens DSM 20476]
          Length = 253

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 83/203 (40%), Gaps = 16/203 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++    FL+G +  + G GGGL+ +P    A         +  H+A+GT+    A ++
Sbjct: 6   LLIVCPLVFLAGFVDAIAG-GGGLISLPAYLLA--------GLPAHMALGTNKLSNAIST 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++ +   R G I + +    +    + + + + +     +        +   ++ IL+L
Sbjct: 57  SVATLRMARAGYIKLPLAVPAVIGALVGSAIGAKLALLTPEGVFQMLLVVALPVVAILVL 116

Query: 143 KRDRLY---CERKFPDNYVKYIWG---MVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
           ++  L         P   +  I G   +VTG   G  G G G F  L  + F    + +A
Sbjct: 117 RKRDLDNGGIAEAAPTPKLLVIIGICAIVTGLYDGFYGPGAGTFMLLSFVTFAKLRVREA 176

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
           + T    +      AL++ + +G
Sbjct: 177 SGTMKMCNLASNISALVMFLNAG 199


>gi|329928595|ref|ZP_08282462.1| putative membrane protein [Paenibacillus sp. HGF5]
 gi|328937711|gb|EGG34120.1| putative membrane protein [Paenibacillus sp. HGF5]
          Length = 264

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 87/253 (34%), Gaps = 24/253 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  + +++    +    SGL G+GG ++  P+L       G++      VA   S+  +
Sbjct: 1   MIVQLVVMVFIGIIGSFFSGLLGIGGAIINFPLLLYVPSWFGLEAFTSKEVA-SISMLQV 59

Query: 79  APTSVMSFMEHRRHGT-----INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
              S+   + +R         ++ +++        I +++ SL    +    +N  +   
Sbjct: 60  FFASLSGMLTNRMSSRGGESYVHKRLVIQMGASTLIGSLIGSLSSMLMTSGTINVIYGFL 119

Query: 134 CLLMGILMLKRDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
            ++  +LM+   R   E +                 +V G        G  I   +++  
Sbjct: 120 AVIAVLLMIVPTRASMENRSVSEVTYHEWIAMGAAFIVGGIAGIVGAGGAFILIPIMLTV 179

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                    A+S  +  L A   ++ +I SG                 ++  +   S++ 
Sbjct: 180 LKIPTRITIASSLAIVFLSAVGGVIGKIASGDIPI-----------WPSLFAVA-GSLMG 227

Query: 248 TPLATKLSYMIGK 260
            P+   +S  +  
Sbjct: 228 APIGAIISRKMNV 240


>gi|326331178|ref|ZP_08197474.1| putative integral membrane protein [Nocardioidaceae bacterium
           Broad-1]
 gi|325951073|gb|EGD43117.1| putative integral membrane protein [Nocardioidaceae bacterium
           Broad-1]
          Length = 259

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 86/209 (41%), Gaps = 13/209 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            +  ++ + L+ +A+  +G +  + G GGGL+ +P L           +  + +     L
Sbjct: 2   PEETLNVLALLALAALAAGYVDAVVG-GGGLIQLPALLLFL-----PGAAPVQILATNKL 55

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
             +  TS+ +   +RR G  + K     + +  + + + + + S++ +        +  +
Sbjct: 56  ASVFGTSISAATYYRRVGP-DPKTFVPLMVLAFVGSALGAGVASYLPEKVFEPIVLVALI 114

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYG 189
           L+G  +L +  L    +             + G   GF  GALG G G F  + ++   G
Sbjct: 115 LVGAWVLFKPSLGEATELKFDDHRHVIGAMVVGFAVGFYDGALGPGTGSFLVIGLVGLLG 174

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
            S  +A+A +   +      AL+V +  G
Sbjct: 175 YSFLEASAKAKMANVATNLAALVVFVPQG 203


>gi|28868975|ref|NP_791594.1| hypothetical protein PSPTO_1769 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28852215|gb|AAO55289.1| membrane protein, putative [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 248

 Score = 50.1 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 86/229 (37%), Gaps = 16/229 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++     I    I   +T
Sbjct: 29  AIPALGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALMLIIPSFIFAWLT 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGI----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           S++   +D   +   F  F +++ +     M  R+ L       + Y+  +         
Sbjct: 89  SMLAVRIDPQSMRLGFVAFLVILTVFNVAQMYWRNTLASGGLRHEKYLWLLGVGSGVTGG 148

Query: 171 GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
                GG + T +L   +GA+   A   +  ++A              + L+    WS+G
Sbjct: 149 LFGVGGGVVATPILTSVFGATQVVAQGLALSLAAP-----STGITLVTYALHDHVNWSMG 203

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                  + +    +       KL++ + ++ L + F + +   + + A
Sbjct: 204 -------IPLAVGGLASISWGVKLAHSLPERTLRLMFCVFLVLCAVILA 245


>gi|260549917|ref|ZP_05824133.1| permease [Acinetobacter sp. RUH2624]
 gi|260407167|gb|EEX00644.1| permease [Acinetobacter sp. RUH2624]
          Length = 258

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 93/256 (36%), Gaps = 25/256 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D I  +I  +F +G +    G GGGL+ +P +   F       S+     +GT+      
Sbjct: 6   DVILSLIFFAFTAGAIDAAVG-GGGLIQIPGIMSTF------PSMQTATVIGTNKVSSIF 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +     +   +  K+L        I++   +  +S + +S L     +  +++ I 
Sbjct: 59  GTASAAYTFAKRVKLQWKLLAVIAICALISSFAGAACLSLIPQSVLRPFVFVMLIVIAIY 118

Query: 141 MLKRDRLYC--ERKFPDNYVKYIWGMV---TGFLSGALGVG-GGIFTNLLMLFYGASIYK 194
            L +         +     +  + G+     GF  G  G G G  F    + F       
Sbjct: 119 TLVKKNFGQVHTEQKITTKMLVLAGIGSLAIGFYDGIFGPGTGSFFIFFFIRFLQVDFLH 178

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A+A S   + +    AL   I +G  +            +   L++   +++ + +  + 
Sbjct: 179 ASALSKIGNFMTNLAALSFLIPTGHAI------------LHIGLMMAAANVIGSIVGVRT 226

Query: 255 SYMIGKKYLTIGFSMI 270
           +   G  ++ I F ++
Sbjct: 227 ALKYGSGFVRIIFLIL 242


>gi|261208762|ref|ZP_05923199.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289565554|ref|ZP_06446001.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|294614418|ref|ZP_06694334.1| hypothetical protein EfmE1636_0524 [Enterococcus faecium E1636]
 gi|260077264|gb|EEW64984.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289162636|gb|EFD10489.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|291592726|gb|EFF24319.1| hypothetical protein EfmE1636_0524 [Enterococcus faecium E1636]
          Length = 262

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 97/263 (36%), Gaps = 26/263 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  V   L+ T+  + G+GGG+++ P+L        I       ++  +++ V   + V
Sbjct: 4   LIYFVVIVLANTVGAISGMGGGVLIKPILDL------IGAHSIAGISFYSTVAVFTMSIV 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------LNKAFAIFCLL 136
            +  +     ++N +I+        +  +  +++     + F       L + F     L
Sbjct: 58  STVRQVSSGKSLNWQIVGWVSGGAVVGGIAGNIVFEVFLQLFENEKHVQLIQIFLTVLTL 117

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           +            +          I G++ GFL+  LG+GGG     LLML +   I +A
Sbjct: 118 V-FAFFYAKHHQPKFHLTSWIWYLICGVILGFLASFLGIGGGPINVSLLMLMFALPIKEA 176

Query: 196 TATSAGVSALIAFPALLV-RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           T  S           L+   + SG+    L            +  I+P +++      K 
Sbjct: 177 TLYSLSTIFFSQLAKLVTIALTSGFMRFDLS----------MLFYIIPAAVIGGLWGAKF 226

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
           S ++  K +T  F  I+     +
Sbjct: 227 SRILSPKKVTFIFQAIVIMVLLI 249


>gi|19705027|ref|NP_602522.1| transporter [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
 gi|19712939|gb|AAL93821.1| Transporter [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
          Length = 254

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 92/263 (34%), Gaps = 27/263 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++ V  F++  +  + G GGGL+ +P         G       H+A+GT+      ++
Sbjct: 8   FLILAVFCFIAAVVDAISG-GGGLISLPAYFAV----GFPP----HMALGTNKLSAFLST 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S  +  +   +N++I+           V+       +D  +         +L+ +  L
Sbjct: 59  FASAFKFWKAKKVNVEIVSKLFAFSLAGAVLGVKTAVSIDTKYFKPISFGILILVFLYAL 118

Query: 143 KRDRLYCERKFPDNYVKYIW-----GMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
           K   L     +     K I          GF  G LG G   F    ++  +      A+
Sbjct: 119 KNKSLGENNYYKGTTPKTIILGKIMAFCLGFYDGFLGPGTAAFLMFCLIKIFKLDFSSAS 178

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++    F +L+V  +            LG +N    + I  +      + ++L+ 
Sbjct: 179 GNTKILNLSSNFASLVVFAF------------LGKLNWAYGISIAIVMTFGAIIGSRLAI 226

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
           + G K++   F ++        +
Sbjct: 227 LKGNKFIKPVFLVVTIVLILKMS 249


>gi|319406791|emb|CBI80424.1| putative membrane protein [Bartonella sp. 1-1C]
          Length = 306

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 55/150 (36%), Gaps = 8/150 (5%)

Query: 2   YDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGI 61
           Y+ +      V+     +   I  ++   F+ G LS + GVGGG + VP L         
Sbjct: 154 YNWIDRLPFKVYFQASMICVSIIPVLGIGFVVGLLSSIMGVGGGFITVPALIYLLH---- 209

Query: 62  DDSICMHVAMGTSLGVIAPTS-VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
              +   V +GTSL  +   S   + ++   + ++++ +         I           
Sbjct: 210 ---VPTSVVVGTSLFQMTFVSAFTTVLQSVSNQSVDIVLAFLLTIGGGIGAQYGVRTGQK 266

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           +    L  A A   +++ + +  +  +  +
Sbjct: 267 LKAEQLRLALAFLVIIVCMRLAFQLFIRPD 296



 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 104/307 (33%), Gaps = 56/307 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + +++    + G  SGLFG+GGG ++ P+L           +I   +
Sbjct: 1   MSIYLPIAELSLSMLILVSMGAIVGFFSGLFGIGGGFLITPLLIFY--------NIPPTI 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------ 123
           A+GT    +  +SV   + H +  T+++K+    +    + ++V   + S + K      
Sbjct: 53  AVGTGANQVIASSVTGAITHFKKRTLDIKLGILLVIGGGVGSLVGIQVFSLLRKLGQLDF 112

Query: 124 ------SFLNKAFAIFCLL--MGILMLKRDRLYCERKFPDNY------------------ 157
                  FL  +     ++  +  +M  R +       P  Y                  
Sbjct: 113 MIALLYVFLLGSIGSLMMVESLCTMMRWRKKEKVMPHSPRYYNWIDRLPFKVYFQASMIC 172

Query: 158 ----VKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G V G LS  +GVGGG  T   +++           TS      ++    +
Sbjct: 173 VSIIPVLGIGFVVGLLSSIMGVGGGFITVPALIYLLHVPTSVVVGTSLFQMTFVSAFTTV 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           ++  S              V+I    ++     +      +    +  + L +  + ++ 
Sbjct: 233 LQSVSNQS-----------VDIVLAFLLTIGGGIGAQYGVRTGQKLKAEQLRLALAFLVI 281

Query: 273 TTSFVFA 279
                 A
Sbjct: 282 IVCMRLA 288


>gi|218249135|ref|YP_002374506.1| hypothetical protein PCC8801_4428 [Cyanothece sp. PCC 8801]
 gi|257062221|ref|YP_003140109.1| hypothetical protein Cyan8802_4492 [Cyanothece sp. PCC 8802]
 gi|218169613|gb|ACK68350.1| protein of unknown function DUF81 [Cyanothece sp. PCC 8801]
 gi|256592387|gb|ACV03274.1| protein of unknown function DUF81 [Cyanothece sp. PCC 8802]
          Length = 267

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 46/125 (36%), Gaps = 6/125 (4%)

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-----LMLKRDRLYCE 150
           N  ++ + +    I + V     + +++  LN+   +F + + +      ++     +  
Sbjct: 78  NWAVIINILAGSLIGSYVGVHYATRINERALNRVVVVFLIFLSVVLIGHNLIFSLGSFQL 137

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFP 209
                    ++ GM+ G  S  LGV GG      ++L +   I  A + S  +S      
Sbjct: 138 PSLLRISFGFLAGMIIGIFSSMLGVAGGELIIPTIILLFAVDIKLAGSLSLAISIPTIVM 197

Query: 210 ALLVR 214
            L   
Sbjct: 198 GLFKY 202



 Score = 43.5 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 12/116 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I    +A  + G  S + GV GG +++P +   F       ++ + +A   SL +  PT 
Sbjct: 143 ISFGFLAGMIIGIFSSMLGVAGGELIIPTIILLF-------AVDIKLAGSLSLAISIPTI 195

Query: 83  VMSFMEHRRHGTI-----NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           VM   ++R    +       + +    F   +   + S ++ +V  S L       
Sbjct: 196 VMGLFKYRSKQRLKEVKPEQEFIGSMAFGSILGAFIGSNLLRYVSSSLLYLILGTI 251


>gi|184155467|ref|YP_001843807.1| putative transport protein [Lactobacillus fermentum IFO 3956]
 gi|227515056|ref|ZP_03945105.1| domain of hypothetical function DUF81 [Lactobacillus fermentum ATCC
           14931]
 gi|183226811|dbj|BAG27327.1| putative transport protein [Lactobacillus fermentum IFO 3956]
 gi|227086578|gb|EEI21890.1| domain of hypothetical function DUF81 [Lactobacillus fermentum ATCC
           14931]
          Length = 246

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 78/197 (39%), Gaps = 12/197 (6%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ TSL    P      +   RHG +N+K+ + +++    T +V SL+  ++ +      
Sbjct: 44  AVDTSLLTAIPALCFGALSFYRHGNVNVKLARQFLYFALPTVIVASLLARYIPEKIYAPL 103

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
             +  +++G+ M  R     E    D      + +++G + G  G+ GG      +L  G
Sbjct: 104 IGLVLVVLGVQMYFRKVRQTEDIHVDRVKAAYYAILSGLMIGIGGLSGGGVIMAGLLAMG 163

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +    ATS+ +    +    ++ +  G           G     A+L+I+  S+    
Sbjct: 164 EDMLGTVATSSFILVWTSLIGAVMHMTGG-----------GVSYFYALLLII-GSVTGAL 211

Query: 250 LATKLSYMIGKKYLTIG 266
           +A ++   + +      
Sbjct: 212 IAPRVLSRVNRATFDRI 228


>gi|149923569|ref|ZP_01911969.1| hypothetical protein PPSIR1_34083 [Plesiocystis pacifica SIR-1]
 gi|149815588|gb|EDM75120.1| hypothetical protein PPSIR1_34083 [Plesiocystis pacifica SIR-1]
          Length = 277

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 84/236 (35%), Gaps = 27/236 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++++   L+G ++ + G GG  +++P L            +    A GT    +   S
Sbjct: 29  VAIVLLVGALAGVINSMAG-GGSFLLIPTLVAL--------GLPATTANGTIRVAVLAQS 79

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +     +    +  + K  +  + +  ++ SL+ + +D +       +  L+  +++L
Sbjct: 80  GAAVATFHKREVHDYPLTKRLVLPMIVGALLGSLLATRLDDAVFRPVIGVCLLIWAVILL 139

Query: 143 KRDR---LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI-FTNLLMLFYGASIYKATAT 198
            +        E+    +          G   G L  G G     LL +  G  + K+ A 
Sbjct: 140 VQPDRFLNPPEQTREPDARTAALAAAVGLYGGFLQAGVGFPLIALLSVHLGCDLVKSNAI 199

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATK 253
                           +  G+ L  LP ++  G +      +++  S++   L  +
Sbjct: 200 KVA-------------LVLGYTLIALPVFAFAGQIAWVPAGVLVIGSMVGAWLGAR 242


>gi|229022497|ref|ZP_04179030.1| integral membrane protein [Bacillus cereus AH1272]
 gi|228738810|gb|EEL89273.1| integral membrane protein [Bacillus cereus AH1272]
          Length = 152

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 49/127 (38%), Gaps = 9/127 (7%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++IV  FL+  +  + G GGGL+ +P L            +    A+ T+      
Sbjct: 8   SVLIILIVFGFLASFIDSVVG-GGGLIALPALLF--------TGLNPASAVATNKLASTM 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
               S +   R G +++K     + +  I +++ +  +  ++   L     I   ++ I 
Sbjct: 59  GCATSNIVFYRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118

Query: 141 MLKRDRL 147
            + +   
Sbjct: 119 TIFKKDW 125



 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 49/120 (40%), Gaps = 13/120 (10%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  ++G +  F+   +G GGG+     +LF G +   A AT+   S              
Sbjct: 12  ILIVFGFLASFIDSVVG-GGGLIALPALLFTGLNPASAVATNKLAST------------M 58

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G   + +  +  G +++ +   ++P++ + + +     +++  + L     +++   +  
Sbjct: 59  GCATSNIVFYRSGNLDLKSAFKLVPLTFIGSIIGAWTVHLMNPEVLKPLMLIMLGVVAIY 118


>gi|206560183|ref|YP_002230947.1| hypothetical protein BCAL1820 [Burkholderia cenocepacia J2315]
 gi|198036224|emb|CAR52120.1| putative membrane protein [Burkholderia cenocepacia J2315]
          Length = 268

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 98/276 (35%), Gaps = 40/276 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V     G + GL G GGG++ VP L        +  S  M  A   +L  +A ++
Sbjct: 1   MLISLVLGGFVGAVLGLTGAGGGILAVPALV-------VGMSWPMQQATPVALVAVAGSA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +E  R G +  +            T +   +   + +  L   FA+  L++   +L
Sbjct: 54  ALGALEGFRRGLVRYRAALLMAVAGVPLTTLGVRLAHVLPQRLLLTLFALTMLVVAGRLL 113

Query: 143 K---------------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
           +                      D       +P        G VTG ++G LGVGGG   
Sbjct: 114 RQALRRVAADADASPLCVGRINPDTGRLVWSWPVGIALASTGAVTGLMTGLLGVGGGFVI 173

Query: 182 NLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             ++  +   S++   ATS  V AL+    +L  + SG               +   L  
Sbjct: 174 VPMLRKFTNVSMHGVVATSLMVIALVGTGGVLATLVSGTRAP-----------LDVTLWF 222

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              + L        S  +  +++  GF+ ++   + 
Sbjct: 223 TVATALGMAAGRGASRHLAARHVQAGFAAVLVCVAL 258



 Score = 44.3 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            +  + G   G + G  G GGGI     L++     + +A          +A  A+    
Sbjct: 2   LISLVLGGFVGAVLGLTGAGGGILAVPALVVGMSWPMQQA--------TPVALVAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +  G V   A L++    + +T L  +L++++ ++ L   F++ M   +
Sbjct: 54  ALG----ALEGFRRGLVRYRAALLMAVAGVPLTTLGVRLAHVLPQRLLLTLFALTMLVVA 109

Query: 276 FV 277
             
Sbjct: 110 GR 111


>gi|306821538|ref|ZP_07455138.1| membrane protein [Eubacterium yurii subsp. margaretiae ATCC 43715]
 gi|304550432|gb|EFM38423.1| membrane protein [Eubacterium yurii subsp. margaretiae ATCC 43715]
          Length = 259

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 79/205 (38%), Gaps = 16/205 (7%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + L+    FL+G +  + G GGGL+ +P              +  H A+ T+    + 
Sbjct: 5   EMLILLYFLVFLAGFIDSIAG-GGGLISLPAYIFV--------GLPAHNAIATNKFTSSL 55

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            + +S +   ++  +++KI         +     S ++  +D+            ++ I+
Sbjct: 56  GTTLSTLRFLKNKALDLKISLISSVGSFMAAHAASELVLKIDEKIFRAIIMFTLPVVAIV 115

Query: 141 MLKRDRLYCE------RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIY 193
           +L R     E       K       +  G+  GF  G +G G G F  +   L     + 
Sbjct: 116 ILSRRNFGNENLSDTIEKRKAYIYAFFIGLFIGFYDGLIGPGTGTFAIMAYCLIMKYDLK 175

Query: 194 KATATSAGVSALIAFPALLVRIYSG 218
            A+  S  ++    + +L V ++SG
Sbjct: 176 TASGNSKMLNLASNYASLSVFLFSG 200


>gi|302876454|ref|YP_003845087.1| hypothetical protein Clocel_3653 [Clostridium cellulovorans 743B]
 gi|307687124|ref|ZP_07629570.1| hypothetical protein Ccel74_03141 [Clostridium cellulovorans 743B]
 gi|302579311|gb|ADL53323.1| protein of unknown function DUF81 [Clostridium cellulovorans 743B]
          Length = 244

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 93/256 (36%), Gaps = 22/256 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           YI  + +++ L+  + G+ G G  LVM P L        +   I +  ++ T++ ++   
Sbjct: 2   YITFLFISTLLAYFIKGITGFGNTLVMSP-LYSFVTSNKLTTPIDLLFSIPTNIFIVW-- 58

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                   R    I++K++     +L I  +  +L++       L     +    MG+ M
Sbjct: 59  --------RERKNISIKVILPLSLMLIIGIIPGTLLLKIGSDWILKSILGLLIAGMGLEM 110

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L R     E    +       G+++G L+G  G+G        ++    +  +  A    
Sbjct: 111 LTRKTNENEVNKTNPIFLTFIGVLSGTLAGLYGIG--ALLVAYIMRTTNTKSQFRANICC 168

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           V  +       + +Y+G               +   L + P  ++   +  K+   + ++
Sbjct: 169 VFLVDNIFRFFLYLYTGILNKET---------LLMALYLSPAVVIGMMIGIKVDSRMNEE 219

Query: 262 YLTIGFSMIMFTTSFV 277
            +      ++  +  V
Sbjct: 220 SIKKLVIALLIISGLV 235


>gi|167586321|ref|ZP_02378709.1| hypothetical protein BuboB_13335 [Burkholderia ubonensis Bu]
          Length = 285

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 56/268 (20%), Positives = 93/268 (34%), Gaps = 31/268 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  ++    G L GL GVGGG +M P+L   F        +    A+GT L   A T  
Sbjct: 31  LLYSLSGLFVGILVGLTGVGGGSLMTPILVLLF-------GVHPATAVGTDLLYAAATKA 83

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI------SHVDKSFLNKAFAIFCLLM 137
              + H   G+++ +I           + VT  ++      +      +        LL 
Sbjct: 84  TGTLVHGLKGSVDWRITGRLAAGSVPASAVTLWILHTYGMHTPAAARLIQLVLGGALLLT 143

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            + ++ R                    +   + G V G L     VG G     ++L   
Sbjct: 144 SLALIFRPQLTALAARNPLAPSPARTLWSTVLTGAVLGVLVSMTSVGAGAIGVTVLLL-- 201

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +Y A AT+  V + IA    L  I       G+  W LG V+   +L +L  S+    
Sbjct: 202 --LYPALATTRIVGSDIAHAVPLTLI------AGMGHWLLGSVDWSMLLSLLIGSLPGIV 253

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + + LS    ++ L    +  +      
Sbjct: 254 IGSVLSTRAPERLLRNLLASTLVAVGLR 281



 Score = 42.8 bits (100), Expect = 0.051,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 49/117 (41%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  +  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 174 VLTGAVLGVLVSMTSVGAGAIGVTVLLLLY------PALATTRIVGSDIAHAVPLTLIAG 227

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M H   G+++  +L   +       V+ S++ +   +  L    A   + +G+ ++ 
Sbjct: 228 MGHWLLGSVDWSMLLSLLIGSLPGIVIGSVLSTRAPERLLRNLLASTLVAVGLRLVL 284


>gi|300312398|ref|YP_003776490.1| permease [Herbaspirillum seropedicae SmR1]
 gi|300075183|gb|ADJ64582.1| permease transmembrane protein [Herbaspirillum seropedicae SmR1]
          Length = 257

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 90/248 (36%), Gaps = 36/248 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L+  F        I   VA+GT L   + T     + HR  GT+   +++   + 
Sbjct: 26  LMTPLLTLLF-------GIHPSVAVGTDLAFASATKTAGTLAHRFKGTVRWDVVRRLSYG 78

Query: 107 LPITTVVTSLMISHV----DKSFL----NKAFAIFCLLMGI----LMLKRDRLYCERKFP 154
                ++T+L++ H     D   L    + A ++F  ++ +     M      + +R+  
Sbjct: 79  ALPAALITTLLLKHFGAVSDGIALTIRYSIAVSVFLTVIALLFRSRMQAWLNAHPQRQLQ 138

Query: 155 DNYV---KYIWGMVTGFLSGALGVGGGIFTNLLMLFY--GASIYKATATSAGVSALIAFP 209
              +       G + G L     +G G     L++      S  +   T    +  +   
Sbjct: 139 GATLANATIAAGALLGTLVTISSIGAGAVGATLLVLLYPRLSPAEIAGTDIAYAVPLTAI 198

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           A L              W LG +N   +  +L  S+    + +  +  + +K+L    ++
Sbjct: 199 AALG------------HWWLGSINWELLATLLLGSVPGITIGSLAARAVPEKFLRGLLAI 246

Query: 270 IMFTTSFV 277
            + + +  
Sbjct: 247 TLTSVAVK 254



 Score = 40.8 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 6/116 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I A  L GTL  +  +G G V   +L   +  +   +        GT +    P + ++ 
Sbjct: 147 IAAGALLGTLVTISSIGAGAVGATLLVLLYPRLSPAEIA------GTDIAYAVPLTAIAA 200

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + H   G+IN ++L   +        + SL    V + FL    AI    + + ++
Sbjct: 201 LGHWWLGSINWELLATLLLGSVPGITIGSLAARAVPEKFLRGLLAITLTSVAVKLI 256


>gi|161524686|ref|YP_001579698.1| hypothetical protein Bmul_1513 [Burkholderia multivorans ATCC
           17616]
 gi|189350557|ref|YP_001946185.1| putative permease [Burkholderia multivorans ATCC 17616]
 gi|160342115|gb|ABX15201.1| protein of unknown function DUF81 [Burkholderia multivorans ATCC
           17616]
 gi|189334579|dbj|BAG43649.1| predicted permease [Burkholderia multivorans ATCC 17616]
          Length = 268

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 50/272 (18%), Positives = 95/272 (34%), Gaps = 40/272 (14%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G + GL G GGG++ VP L        +     M  A   +L  +A ++ +  
Sbjct: 5   LLLGGCVGAVLGLTGAGGGILAVPALV-------VGMGWPMQQATPVALVAVAGSAALGA 57

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML---- 142
           +E  R G +  +            T + + +   + +  L   FA+  L++   +L    
Sbjct: 58  LEGFRRGLVRYRAALLMAVAGVPLTTLGARLAHVLPQRVLLALFALTMLVVATRLLCQAL 117

Query: 143 -----------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
                              D       +P        G VTG ++G LGVGGG     ++
Sbjct: 118 RQPAADAQLSPLCVGRVNPDTGRLVWSWPVGLALASTGAVTGLMTGLLGVGGGFVIVPML 177

Query: 186 LFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
             +   S++   ATS  V AL+    +   + +G               I  +L     +
Sbjct: 178 RKFTNVSMHGIVATSLMVIALVGTGGVFATLAAGTHAA-----------IDVMLWFTVAT 226

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            L        S  +  +++  GF+ ++   + 
Sbjct: 227 ALGMAAGRGASRHLSARHVQAGFAAVLVCVAL 258



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 13/122 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            V  + G   G + G  G GGGI     L++  G  + +A          +A  A+    
Sbjct: 2   LVSLLLGGCVGAVLGLTGAGGGILAVPALVVGMGWPMQQA--------TPVALVAVAGSA 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             G     L  +  G V   A L++    + +T L  +L++++ ++ L   F++ M   +
Sbjct: 54  ALG----ALEGFRRGLVRYRAALLMAVAGVPLTTLGARLAHVLPQRVLLALFALTMLVVA 109

Query: 276 FV 277
             
Sbjct: 110 TR 111


>gi|261409369|ref|YP_003245610.1| hypothetical protein GYMC10_5596 [Paenibacillus sp. Y412MC10]
 gi|261285832|gb|ACX67803.1| protein of unknown function DUF81 [Paenibacillus sp. Y412MC10]
          Length = 264

 Score = 49.7 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 88/253 (34%), Gaps = 24/253 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  + +++    +    SGL G+GG ++  P+L       G++      VA   S+  +
Sbjct: 1   MIVQLVVMVFIGIIGSFFSGLLGIGGAIINFPLLLYVPSWFGLEAFTSKEVA-SISMLQV 59

Query: 79  APTSVMSFMEHRRHGT-----INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
              S+   + +R         ++ +++        I +++ SL    +    +N  +   
Sbjct: 60  FFASLSGMLTNRMSSRGGESYVHKRLVIQMGASTLIGSLIGSLSSMLMTSGTINVIYGFL 119

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG------IFTNLLMLF 187
            ++  +LM+   R   E +       + W  +          G        I   +++  
Sbjct: 120 AVIAVLLMIVPTRASMENRSVSEVTYHAWIAMGAAFIVGGIAGIVGAGGAFILIPIMLTV 179

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                    A+S  +  L A   ++ +I SG                 ++  ++  S++ 
Sbjct: 180 LKIPTRITIASSLAIVFLSAVGGVIGKIASGDIPI-----------WPSLFAVV-GSLMG 227

Query: 248 TPLATKLSYMIGK 260
            P+   +S  +  
Sbjct: 228 APIGAIISRKMNV 240


>gi|240142628|ref|YP_002967141.1| putative permease [Methylobacterium extorquens AM1]
 gi|240012575|gb|ACS43800.1| putative permease [Methylobacterium extorquens AM1]
          Length = 269

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 51/125 (40%), Gaps = 10/125 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L+    +         HVA+GTS   ++ ++  + +   R G +  +    +     
Sbjct: 34  VPLLTYVVGVS------SPHVAIGTSALAVSVSAASNLVPQWRAGNVKWRCAAAFSVAGV 87

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP----DNYVKYIWGM 164
           +  +  S+    VD   L   F +  L++G LML++ R   + +      +  V   W +
Sbjct: 88  LGALAGSVAAKAVDGQSLLALFGVVMLVVGGLMLRKRRGDGDPEVRLTKVNAPVLLPWLL 147

Query: 165 VTGFL 169
             GF 
Sbjct: 148 GIGFA 152


>gi|21220948|ref|NP_626727.1| hypothetical protein SCO2485 [Streptomyces coelicolor A3(2)]
 gi|6759580|emb|CAB69773.1| conserved hypothetical protein SC7A8.24c [Streptomyces coelicolor
           A3(2)]
          Length = 260

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 52/156 (33%), Gaps = 7/156 (4%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+GT+  V    +  + + + R   ++++            +   +   + +    L   
Sbjct: 50  ALGTNKAVAIVGTTGAAVTYARKAPVDVRTAVRIGLAALAGSSGGAFFAAGMSTEVLKPV 109

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYI------WGMVTGFLSGALGVGGGIFTNL 183
             +  L +   ++ R              + I       G+  GF  G +G G G F  L
Sbjct: 110 IMVVLLAVAAFVIFRPAFGTAPATGPATRRRILAAIGLAGLGIGFYDGLVGPGTGTFLVL 169

Query: 184 LML-FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            +       +  A+AT+  V+      AL    + G
Sbjct: 170 ALTALLHLDLVTASATAKIVNCCTNAGALATFAWQG 205


>gi|311104357|ref|YP_003977210.1| hypothetical protein AXYL_01152 [Achromobacter xylosoxidans A8]
 gi|310759046|gb|ADP14495.1| hypothetical protein AXYL_01152 [Achromobacter xylosoxidans A8]
          Length = 249

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 80/239 (33%), Gaps = 21/239 (8%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           G+ G G  +V VPVL +   L      +         L  +A T+++     RR   +++
Sbjct: 21  GMTGFGAAMVAVPVLVQFMPLQFAVPLVV--------LFDLACTALVGGSNWRR---VSL 69

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY 157
             LK     L +   +   ++ +    +       F L + I  L+  R          +
Sbjct: 70  VELKRLFPWLLLGIGLGVTLLHNAGARWPLILLGSFVLAVCIKGLRGARAKAAAPLNTFW 129

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
               +G+  G  S   G GG     + +     ++ +  AT + V              +
Sbjct: 130 ALP-FGVFGGIFSALFGTGG-PIYTIYLSRRLDALDQFRATISVVILASGLIRAAAFGAA 187

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           G               + A  ++LP++++     ++L   +  + L     +++     
Sbjct: 188 GLYAQPEI--------LSAAAVLLPVALIGLYGGSRLRARVSPELLKRAIFLLLAIAGA 238


>gi|299530859|ref|ZP_07044273.1| hypothetical protein CTS44_08742 [Comamonas testosteroni S44]
 gi|298721080|gb|EFI62023.1| hypothetical protein CTS44_08742 [Comamonas testosteroni S44]
          Length = 198

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 49/119 (41%), Gaps = 7/119 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +       G ++G+ GVGGG V+VP   +         ++ +H  + TSL V+A  ++ S
Sbjct: 83  LAGIGSACGLMTGMLGVGGGFVIVPAFKQW-------TNVQLHGIVATSLFVVAMVAMGS 135

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +     G    +    ++            +   +    +  AF++  + + +L+L R
Sbjct: 136 AITSLATGAHVGQTGVFFVTASVCGMFAGRCVAPLLSAKTVQTAFSVLAMSVAMLLLYR 194



 Score = 44.3 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 60/201 (29%), Gaps = 39/201 (19%)

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD------- 155
                 + T + S M   +    L   FAI  L +   +L            D       
Sbjct: 1   MGVAGLVATPIGSRMAKELPAHVLLTMFAIVMLYVAGRLLLPRGTPTSLPSLDEALAATT 60

Query: 156 -------------------NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
                                     G   G ++G LGVGGG         +    ++  
Sbjct: 61  VKNCMLNPSNGRFSWTNRCAATLAGIGSACGLMTGMLGVGGGFVIVPAFKQWTNVQLHGI 120

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            ATS  V A++A  + +  + +G  +        G   + A +  +     + PL     
Sbjct: 121 VATSLFVVAMVAMGSAITSLATGAHV-----GQTGVFFVTASVCGMFAGRCVAPL----- 170

Query: 256 YMIGKKYLTIGFSMIMFTTSF 276
             +  K +   FS++  + + 
Sbjct: 171 --LSAKTVQTAFSVLAMSVAM 189


>gi|293378153|ref|ZP_06624322.1| putative membrane protein [Enterococcus faecium PC4.1]
 gi|292643017|gb|EFF61158.1| putative membrane protein [Enterococcus faecium PC4.1]
          Length = 278

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 96/262 (36%), Gaps = 24/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  V   L+ T+  + G+GGG+++ P+L        I       ++  +++ V   + V
Sbjct: 4   LIYFVVIVLANTVGAISGMGGGVLIKPILDL------IGAHSVAGISFYSTVAVFTMSIV 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------LNKAFAIFCLL 136
            +  +     ++N +I+        +  VV +++     + F       L + F     L
Sbjct: 58  STVRQVSSGKSLNWQIVGWVSSGAVVGGVVGNIVFEVFLQLFENEKHVQLIQIFLTVLTL 117

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           +            +          I G+V GFL+  LG+GGG     LLML +   I +A
Sbjct: 118 V-FAFFYTKHHQPKFHLTSWTWYLICGVVLGFLASFLGIGGGPVNVSLLMLMFALPIKEA 176

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           T  S           L+    +          S    ++  +  ++P +I+        S
Sbjct: 177 TLYSLSTIFFSQLAKLVTIALTS---------SFMRFDLSMLFYVIPAAIIGGLWGASFS 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
            ++  K +T  F  I+     +
Sbjct: 228 RILSPKKVTFIFQAIVIVVLLI 249



 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 10/124 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              ++   + G L+   G+GGG V V +L   F       ++ +  A   SL  I  + +
Sbjct: 137 TWYLICGVVLGFLASFLGIGGGPVNVSLLMLMF-------ALPIKEATLYSLSTIFFSQL 189

Query: 84  MSFMEHRRHGTI---NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
              +      +    ++ +L   I    I  +  +     +    +   F    +++ ++
Sbjct: 190 AKLVTIALTSSFMRFDLSMLFYVIPAAIIGGLWGASFSRILSPKKVTFIFQAIVIVVLLI 249

Query: 141 MLKR 144
            L  
Sbjct: 250 NLYN 253


>gi|99082858|ref|YP_615012.1| hypothetical protein TM1040_3018 [Ruegeria sp. TM1040]
 gi|99039138|gb|ABF65750.1| protein of unknown function DUF81 [Ruegeria sp. TM1040]
          Length = 252

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 87/252 (34%), Gaps = 25/252 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +   + + L++ A F +G +  + G GGGL+ VPVL  A              A+ T+  
Sbjct: 3   EVTFEVLLLLMAAGFAAGFIDAVAG-GGGLITVPVLLIA--------GANPVTALATNKI 53

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                +  + + + R G +N++       +    ++  +L++S +    +  A  +  + 
Sbjct: 54  QGLFGAATAAITYARGGHVNLRTQWKSAVIAFFASIAGALLVSVLPVELIRYALPVLLIG 113

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVT---GFLSGALGVGGGIF-TNLLMLFYGASI 192
           + +    +  L  E +            +        G LG G G F     +   G  +
Sbjct: 114 IAVFFATKKGLNDEDRAQRLTPAVFAATMVPLCAAYDGLLGPGAGSFYMLAFVGLAGYGV 173

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            KATA +  ++      AL             P W  G       L +    I    +  
Sbjct: 174 LKATAHTKLLNFASNAGALAAFAVV-----ATPWWLTG-------LAMGFAQIAGARVGA 221

Query: 253 KLSYMIGKKYLT 264
            L+   G K + 
Sbjct: 222 GLAQKQGAKVIK 233


>gi|114799801|ref|YP_759214.1| hypothetical protein HNE_0484 [Hyphomonas neptunium ATCC 15444]
 gi|114739975|gb|ABI78100.1| putative membrane protein [Hyphomonas neptunium ATCC 15444]
          Length = 264

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 5/156 (3%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           H+A+GTS   +A  + +S + H R   +       +       +VV S +   VD ++L 
Sbjct: 47  HMAIGTSAAAVAAIAAVSLIGHWRAKRVKWPCAGLFALAGIAGSVVGSQLALRVDGTWLL 106

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI----WGMVTGFLSGALGVGGGIFTNL 183
            AFA+    +G+ M +R +   +                G++TG  +G  G+GGG     
Sbjct: 107 LAFAVAMGAIGLSMFRRPKGLGDPDVHITAAIMARIVPLGLLTGLAAGFFGIGGGFLIVP 166

Query: 184 -LMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            LM+  G ++  A A+S    AL          ++G
Sbjct: 167 GLMMATGMTLSNAMASSLVSVALFGATTSANYAFAG 202


>gi|209965897|ref|YP_002298812.1| hypothetical protein RC1_2619 [Rhodospirillum centenum SW]
 gi|209959363|gb|ACI99999.1| conserved domain protein [Rhodospirillum centenum SW]
          Length = 306

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 105/305 (34%), Gaps = 53/305 (17%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + V+L    +     L++    + G LSGLFGVGGG +M P+L       GI  +    V
Sbjct: 1   MQVYLPIAELSVNALLLLGLGGIVGFLSGLFGVGGGFLMTPLLIFI----GIPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+GT    +   SV   + H R   +++K+    +    + TV+   +   +        
Sbjct: 53  AVGTQANQLVGASVSGVLGHWRRNNVDVKLGLVMLAGGAVGTVLGVWLFGLLQTLGHIDL 112

Query: 125 FLNKAFAIFCLLMGILML------------------------------KRDRLYCERKFP 154
            +  ++  F  ++  LML                               + R    R + 
Sbjct: 113 AIGLSYVFFLGVISSLMLWESVRALLRGRDAAVAKAKMHHHTWLHGLPFKVRFPRSRLYV 172

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
              +    G V G L   +G+GGG      M++    +  A      +  +I    +   
Sbjct: 173 SVLLPGGIGFVGGVLVAIMGIGGGFMLVPAMIYL-LGMPTAMVAGTSLFQIIFTTGIAAF 231

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
             + +            V+I   L++L   ++     ++    +  +      ++++   
Sbjct: 232 AQATFNHT---------VDILLALLLLVGGVIGAQFGSRAGTKLRGEQARALLALMVLAV 282

Query: 275 SFVFA 279
           +   A
Sbjct: 283 AVKLA 287


>gi|187929094|ref|YP_001899581.1| hypothetical protein Rpic_2015 [Ralstonia pickettii 12J]
 gi|187725984|gb|ACD27149.1| protein of unknown function DUF81 [Ralstonia pickettii 12J]
          Length = 273

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 79/270 (29%), Gaps = 42/270 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             + G +  L G GG +V VP+L     L   + +    +A+G S G+ A   +      
Sbjct: 15  GSVVGLILALTGAGGAIVAVPLLIFGLHLSVPEAAPIALLAVGLSAGLGATLGL------ 68

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
            R   +  K          + +     +   V  + L   FA+    + + M ++ R   
Sbjct: 69  -RERKVRYKAAGLMALCGVVISPFGIWVAHRVPNTPLTLLFAVVLAYVAVRMFRQARAAP 127

Query: 150 ER-----------KFPDNYVKYIWGMVTGFLSGALGVGG------------GIFTNLLML 186
                               K +W +       A GVG              +    L  
Sbjct: 128 STEPRPRRTAPPCHLDSTTAKLVWTLPCARALAASGVGAGFLSGLLGVGGGFVIVPALRR 187

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
                +    ATS  V AL++   ++                 G V+    L     ++ 
Sbjct: 188 ATDLPMQTIVATSLAVIALVSGGGVVASAIG------------GHVDWHIALPFAAGALT 235

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              +  + +  +    L  GF+      + 
Sbjct: 236 GMLVGRRFARHLAGPALQQGFAAFAGVVAL 265



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 31/81 (38%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + M   + TSL VIA  S    +     G ++  I   +        +V      H+  
Sbjct: 190 DLPMQTIVATSLAVIALVSGGGVVASAIGGHVDWHIALPFAAGALTGMLVGRRFARHLAG 249

Query: 124 SFLNKAFAIFCLLMGILMLKR 144
             L + FA F  ++ + M+ R
Sbjct: 250 PALQQGFAAFAGVVALGMIVR 270



 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 46/124 (37%), Gaps = 11/124 (8%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
              +    G V G +    G GG I    L++F    ++ +   +A ++ L    +  + 
Sbjct: 7   GWIISAGLGSVVGLILALTGAGGAIVAVPLLIF---GLHLSVPEAAPIALLAVGLSAGLG 63

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
              G             V   A  ++    ++I+P    +++ +    LT+ F++++   
Sbjct: 64  ATLGLRERK--------VRYKAAGLMALCGVVISPFGIWVAHRVPNTPLTLLFAVVLAYV 115

Query: 275 SFVF 278
           +   
Sbjct: 116 AVRM 119


>gi|325968003|ref|YP_004244195.1| permease [Vulcanisaeta moutnovskia 768-28]
 gi|323707206|gb|ADY00693.1| Putative permease [Vulcanisaeta moutnovskia 768-28]
          Length = 473

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 81/262 (30%), Gaps = 52/262 (19%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL+          SI +  A G++L     TS  S   + +    N +I    +     
Sbjct: 38  PVLTLFL-------SIPIIYATGSALISTISTSAGSASVYVKKRLANDRIGISLVTATTT 90

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN------------- 156
             ++ SL  + V    L     +   ++ +  +         + P               
Sbjct: 91  GAIIGSLTANFVYAHGLTWVIYVIFGVVLLASIVPTVQRSTCELPPPRNPDRTTKVFKLY 150

Query: 157 -------------------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKAT 196
                              ++ ++     GF+SG LG+G G    L M +     +  +T
Sbjct: 151 GVCYDPALKIWYKYWGVRWWLGWLIMFFAGFISGLLGIGSGALKVLAMDWGMNLPMKVST 210

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            TS  +  + A  +  +             W  G+++           ++ + + T++  
Sbjct: 211 TTSNFMIGVTAATSGSLY------------WYFGYISPFIATCTAIGVLIGSRIGTRMLM 258

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            +  K +   F  ++    F  
Sbjct: 259 YVTNKQVRWVFVAVLAYLGFRM 280



 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 7/135 (5%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G +SGL G+G G + V  +           ++ M V+  TS  +I  T+  S   + 
Sbjct: 177 FFAGFISGLLGIGSGALKVLAMDW-------GMNLPMKVSTTTSNFMIGVTAATSGSLYW 229

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
             G I+  I       + I + + + M+ +V    +   F      +G  M+ R      
Sbjct: 230 YFGYISPFIATCTAIGVLIGSRIGTRMLMYVTNKQVRWVFVAVLAYLGFRMVLRGLGREG 289

Query: 151 RKFPDNYVKYIWGMV 165
                +  + I   V
Sbjct: 290 LLPITSLERTIIATV 304


>gi|242279660|ref|YP_002991789.1| hypothetical protein Desal_2192 [Desulfovibrio salexigens DSM 2638]
 gi|242122554|gb|ACS80250.1| protein of unknown function DUF81 [Desulfovibrio salexigens DSM
           2638]
          Length = 426

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 99/292 (33%), Gaps = 68/292 (23%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I     +G ++G  G GGG ++ P L        +   I   +A+GT L  I   ++M  
Sbjct: 85  IAIGLGAGLITGCIGAGGGFIIAPAL--------MSAGIKGILAVGTDLFHIFAKAIMGS 136

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSL-------MISHVDKSFLNKAFAIFCLLMGI 139
           + HR+ G +++ +   ++    +      +       +   +  +F+   +++    +G 
Sbjct: 137 VIHRKMGNVSVPLAVVFLIGAIVGATAGGIINRVLYEINPVLSDAFITTVYSLMLGFLGF 196

Query: 140 LML-----------------------------------------KRDRLYCERKFPDNYV 158
             +                                             L    +      
Sbjct: 197 YAMFDYLKARKAGSGGCAHGGGEGAELGALSKSLQSVNFPPMVKFDQDLTPGGRQISWIF 256

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             + G + G  +G +GVGGG  T  + ++             GVS++      + +I   
Sbjct: 257 LVLSGALVGLAAGIMGVGGGFLTFPIFVYV-----------LGVSSMTTVGTDIFQIVFT 305

Query: 219 WGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            G   +  +++ GF+     + +L  S+L   +   ++ ++    +   ++M
Sbjct: 306 AGFASISQYAIYGFIFYTLAMGMLLGSLLGIQIGALVTKVVPGITIRGFYAM 357



 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 57/177 (32%), Gaps = 10/177 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS- 82
             ++++  L G  +G+ GVGGG +  P+             +     +GT +  I  T+ 
Sbjct: 255 IFLVLSGALVGLAAGIMGVGGGFLTFPIFVYVL-------GVSSMTTVGTDIFQIVFTAG 307

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S  ++  +G I   +    +    +   + +L+   V    +   +A+  L   +  +
Sbjct: 308 FASISQYAIYGFIFYTLAMGMLLGSLLGIQIGALVTKVVPGITIRGFYAMAVLAGFVNRI 367

Query: 143 KRDRLYCERK--FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
                        P +          G  +  + +GG     +          KA  
Sbjct: 368 FALPGKLGEMGYIPISPALGDTLNTIGIWAFFVVIGGFSVWVIGTFLKNIQNLKAEG 424


>gi|284005666|ref|YP_003391486.1| protein of unknown function DUF81 [Spirosoma linguale DSM 74]
 gi|283820850|gb|ADB42687.1| protein of unknown function DUF81 [Spirosoma linguale DSM 74]
          Length = 344

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 57/152 (37%), Gaps = 4/152 (2%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           HV    S+G ++ +S+   +       I   ++  ++        + + ++++++  +L 
Sbjct: 44  HVPAALSIGTVS-SSISRIIAFWPR--IRWDVVVWFVPPALPAVWIGAKLLTYINPLYLE 100

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
               +F +    L+ +  +              + G+  GF+SG  G  G +  N   L 
Sbjct: 101 LLMGLFLMANLPLIFRSAKEQEVVHPLPKGYLALIGLAAGFVSGLTGAVG-LLFNRFYLR 159

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           YG    +  AT A    ++    L +    G 
Sbjct: 160 YGMGKEEIVATRAANEVMLHLVKLALYASFGL 191


>gi|157364223|ref|YP_001470990.1| hypothetical protein Tlet_1369 [Thermotoga lettingae TMO]
 gi|157314827|gb|ABV33926.1| protein of unknown function DUF81 [Thermotoga lettingae TMO]
          Length = 242

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 94/251 (37%), Gaps = 30/251 (11%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              LI ++   SG L+ + G GG L+ +P+L+           + + +A GT+   I   
Sbjct: 2   LYILIFLSGIASGFLNVVAG-GGSLITLPLLTML--------GMGIDIANGTNRIAILLQ 52

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-- 139
           ++++     ++  + +K    +     I ++V + ++  + K  L K   +  L+M +  
Sbjct: 53  NIVAVRNFHKNRVLPVKTALLYAVPAAIGSIVGTAIVVDISKDLLKKIVGVVLLIMAVFL 112

Query: 140 ----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
                M   +R      F   +V +  G+  GF+   +G     F      F G  + + 
Sbjct: 113 LSKPKMWTEERKKSVNVFLTAFVFFCIGVYGGFIQAGVGF---FFIFFTATFLGFDLVRN 169

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            A    +       +LL+ + +G                 A LI+   S+L   +  + +
Sbjct: 170 NALKVFIVLAYTPISLLIFVLNGKVEP------------LAGLILGLGSMLGASMGARFA 217

Query: 256 YMIGKKYLTIG 266
              G  +L   
Sbjct: 218 IKKGANWLRFI 228


>gi|260578471|ref|ZP_05846385.1| membrane protein [Corynebacterium jeikeium ATCC 43734]
 gi|258603493|gb|EEW16756.1| membrane protein [Corynebacterium jeikeium ATCC 43734]
          Length = 337

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 68/206 (33%), Gaps = 23/206 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVA-MGTSLGVIAP 80
           I +  +    +  + G  G+  G+    +L   F  +G    S  +H+A +GT+L     
Sbjct: 3   ILIFALVGVAAQLVDGALGMAFGITATTLL--IFSGLGPAHASAAIHLAEVGTTLF---- 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
               S + H R   ++   +        I   + + ++S++         +   +L+G  
Sbjct: 57  ----SGLSHWRLKNVHWPTVLALGVPGAIGAFMGAYVLSNLSTKAAEPVVSTLLVLLGSY 112

Query: 141 MLKRD-----------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
           +L R            +     +     +  +        +   G  G + T+ LM    
Sbjct: 113 VLVRSVAVPWKKNEDTQPVSTTRRSRFGLAGLGLAGGFLDASGGGGWGPVTTSTLMSVGK 172

Query: 190 ASIYKATATSAGVSALIAFPALLVRI 215
           A   +   T      L+A  A    +
Sbjct: 173 AEPRRIIGTVNTAEFLVAISATAGFV 198


>gi|89901032|ref|YP_523503.1| hypothetical protein Rfer_2250 [Rhodoferax ferrireducens T118]
 gi|89345769|gb|ABD69972.1| protein of unknown function DUF81 [Rhodoferax ferrireducens T118]
          Length = 268

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 11/121 (9%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +    G V G +    G GGG+    L++     ++     +A V  +    A ++    
Sbjct: 6   LAVALGAVIGLVMALTGAGGGVMAIPLLVL---GLHLPVQQAAPVGLVAVGLAAVLGAAL 62

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           G           G V   A  +I    +L+ PL   L+  +  + L   F++++  T++ 
Sbjct: 63  GLRQ--------GIVRYRAAALIGIAGMLMAPLGVFLAQRLPNRPLLGAFALVLIYTAWR 114

Query: 278 F 278
            
Sbjct: 115 M 115



 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 7/130 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L +    + G +  L G GGG++ +P+L     L        +  A    L  + 
Sbjct: 1   MDLTTLAVALGAVIGLVMALTGAGGGVMAIPLLVLGLHL-------PVQQAAPVGLVAVG 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +V+      R G +  +          +   +   +   +    L  AFA+  +    
Sbjct: 54  LAAVLGAALGLRQGIVRYRAAALIGIAGMLMAPLGVFLAQRLPNRPLLGAFALVLIYTAW 113

Query: 140 LMLKRDRLYC 149
            ML+R +L  
Sbjct: 114 RMLRRSKLSI 123



 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 7/88 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V+VP L++          + +     TSL VIA  S+        HG +   +   +  
Sbjct: 170 FVIVPALTRY-------TDLDIRSIQLTSLAVIALVSLSGVCAAAMHGPLRWDVALPFAC 222

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIF 133
              +  +    +   ++   L +AFA F
Sbjct: 223 GAVLALLAGQQISKMLNAKSLQQAFAWF 250


>gi|237786256|ref|YP_002906961.1| hypothetical protein ckrop_1695 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237759168|gb|ACR18418.1| putative membrane protein [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 346

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 84/259 (32%), Gaps = 24/259 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I + ++    +  + G  G+  G+    +L           +I   V +GT+L +  
Sbjct: 1   MEAIIIFLLIGVGAQLVKGSMGMAYGVTSTTLLVFTGVQAATASAIVHLVEVGTTLAL-- 58

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                  + H + G ++ K+             + + ++     S      A   + +G 
Sbjct: 59  ------GLSHWKMGNVDWKLALSLGAPGAFGAFIGARVLGQASASAARPLTAAILVALGT 112

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFL-----SGALGVGGGIFTNLLMLFYGASIYK 194
            ++ R       +    +     G++ GF+     +   G  G + T+ LM        +
Sbjct: 113 FIVLRFIGLVTIQAKTVWGPKRLGIL-GFVVGGLDATGGGGWGTMTTSTLMAAGKREPRR 171

Query: 195 ATATSAGVSALIAFPALLVRI-YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
              T      L+A  A L  I      +      +LG         +    I+  P A  
Sbjct: 172 IVGTVLAAQFLVATAATLGFIPVLSREVEHHAAPALG---------LFIGGIVTAPFAAW 222

Query: 254 LSYMIGKKYLTIGFSMIMF 272
           L+  +    L     +++ 
Sbjct: 223 LAGKVNASVLGGAVGVLLV 241


>gi|262066771|ref|ZP_06026383.1| putative membrane protein [Fusobacterium periodonticum ATCC 33693]
 gi|291379574|gb|EFE87092.1| putative membrane protein [Fusobacterium periodonticum ATCC 33693]
          Length = 256

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 94/263 (35%), Gaps = 27/263 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++ V  F++  +  + G GGGL+ +P         G       H+A+GT+      ++
Sbjct: 10  FLILAVCCFIASVVDAISG-GGGLISLPAYFAV----GFPP----HMALGTNKLSAFLST 60

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S  +  +   IN++I+           V+       +D  +         +++ +  L
Sbjct: 61  FASAFKFWKAKKINVEIVSKLFAFSLAGAVLGVKTAVSIDTKYFKPISFAILIVVFLYAL 120

Query: 143 KRDRLYCERKFPDNYVKY-----IWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
           K   +    ++     K      I     GF  G LG G   F    ++  +      A+
Sbjct: 121 KNKAMGEVNRYKGTTPKTILLGKIMAFGLGFYDGFLGPGTAAFLMFCLIKIFKLDFSSAS 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++    F +L+V               LG +N G  + I  +  +   + ++L+ 
Sbjct: 181 GNTKILNLSSNFASLVVF------------GFLGKLNWGYGISIALVMTVGAIIGSRLAI 228

Query: 257 MIGKKYLTIGFSMIMFTTSFVFA 279
           + G K++   F ++        +
Sbjct: 229 LKGNKFIKPVFLVVTIVLILKMS 251


>gi|260763093|ref|ZP_05875425.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260673514|gb|EEX60335.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 306

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 88/273 (32%), Gaps = 56/273 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G LSGLFGVGGG ++ P+L           +I   +A+ T    +  +S
Sbjct: 14  MLVLLGMGAAVGFLSGLFGVGGGFLITPLLIFY--------NIPPAIAVATGANQVIASS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
           V   + H +  T+++K+    +    + +++   + S +         ++  +  F   +
Sbjct: 66  VSGALAHFKRRTLDIKLGLFLVAGGILGSLIGIFVFSWLRDLGQLDLIVSILYVFFLGTI 125

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R      +         G   
Sbjct: 126 GGLMLVESVQALRRAKKGQGGAVRRSGQHTWIHRLPFKMRFRASTIYVSVIPVLGIGFFI 185

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G LS  +GVGGG      +++           TS      +     +++  +        
Sbjct: 186 GLLSSVMGVGGGFIMVPALIYLLHVPTNVVVGTSLFQITFVTAFTTVMQATTNQS----- 240

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 ++I    ++    ++      +    +
Sbjct: 241 ------IDIVLAFLLTVGGVIGAQYGARAGRKL 267


>gi|188533713|ref|YP_001907510.1| Conserved hypothetical protein (DUF81) [Erwinia tasmaniensis
           Et1/99]
 gi|188028755|emb|CAO96617.1| Conserved hypothetical protein (DUF81) [Erwinia tasmaniensis
           Et1/99]
          Length = 270

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 83/210 (39%), Gaps = 13/210 (6%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            +    ++  + L+++ASF++G +  + G G GL+++P     F L G+       +A+G
Sbjct: 14  SIIAKYLILGVFLLVIASFVAGYIDAIAG-GAGLILIPA----FILTGLPP----QLALG 64

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
               V    +V +     ++ ++   ++   +        V + +I  +    L+     
Sbjct: 65  QEKLVSTIGTVAAIKNFVKNKSVIWSVVPAGLISALAGAYVGAKVILLLPAETLSMVIVG 124

Query: 133 F--CLLMGILMLKRDRLYCERKFPDNYVK-YIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
                L+   +  + +   E +   N++  ++   + GF  G  G G G    + +    
Sbjct: 125 LLPVGLIAATVKGKIKKSAENQVKTNFLAIFVVCFIVGFYDGFFGPGTGSLFIIALALIN 184

Query: 190 -ASIYKATATSAGVSALIAFPALLVRIYSG 218
              + +A+ATS   +      A +    +G
Sbjct: 185 KFGLLQASATSKIFNFSSNIGAFVAFAIAG 214


>gi|284167470|ref|YP_003405748.1| hypothetical protein Htur_4256 [Haloterrigena turkmenica DSM 5511]
 gi|284017125|gb|ADB63075.1| protein of unknown function DUF81 [Haloterrigena turkmenica DSM
           5511]
          Length = 330

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 7/137 (5%)

Query: 3   DLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGID 62
           D     ++   +  + V   + ++++ + L G LSG  GVGGG +MVPVL   F + G  
Sbjct: 149 DRFERITVPPLIFLENVDVSVWIVLLIAVLVGILSGFLGVGGGFLMVPVLMYGFAMPG-- 206

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
                 VA+GT +  I  +S      + + G+I+  +L   +    + T + +++  ++D
Sbjct: 207 -----AVAVGTDIMQITVSSAYGAFVYGQRGSIHFAMLLPLLIGSTVGTRIGAVLTDYLD 261

Query: 123 KSFLNKAFAIFCLLMGI 139
            + L   F +  L+  +
Sbjct: 262 DAELRTTFGVMLLVGSV 278


>gi|134098993|ref|YP_001104654.1| membrane permease protein [Saccharopolyspora erythraea NRRL 2338]
 gi|133911616|emb|CAM01729.1| conserved hypothetical membrane permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 258

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 7/105 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP L              + +A+ TSL V+A +S+   +   R   +   +   +  
Sbjct: 22  ILAVPALVY-------GVGQPLQMAIPTSLAVVALSSLGGLLPRERRTVVRWPVALVFGA 74

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
                    + +   + + +L  AF+   +++ + ML+  +    
Sbjct: 75  AGTPAAFGGAALGRLLPQRWLLLAFSALMIVVAVRMLRGGQNQAG 119


>gi|86140514|ref|ZP_01059073.1| hypothetical protein MED217_15220 [Leeuwenhoekiella blandensis
           MED217]
 gi|85832456|gb|EAQ50905.1| hypothetical protein MED217_15220 [Leeuwenhoekiella blandensis
           MED217]
          Length = 244

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 70/199 (35%), Gaps = 15/199 (7%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D   + ++ + ++  +  + G G  +  VP+ +  F    +             L  +  
Sbjct: 3   DISVVFLLLALIAEIIGTIGGFGSSVFFVPIGNFYFDFYSVLG-----------LTAVFH 51

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S            ++ K++        +  ++   +   +   FL     IF +   +L
Sbjct: 52  LSSNLSKIFLFKKGVDKKLVLRLGIPSVLFVIIGGYLSKLLQVHFLEIILGIFLVGFSLL 111

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
            L +  +  +   P      + G ++GF +G LG GG     L M  +        ATSA
Sbjct: 112 FLIKSEIVFK---PSARNAIVGGSLSGFSAGLLGTGG-AIRGLTMAAFNLEKSAFIATSA 167

Query: 201 GVSALIAFPALLVRIYSGW 219
            +   I F   +V   +G+
Sbjct: 168 LIDFAIDFSRTIVYYNNGY 186


>gi|145221953|ref|YP_001132631.1| hypothetical protein Mflv_1361 [Mycobacterium gilvum PYR-GCK]
 gi|145214439|gb|ABP43843.1| protein of unknown function DUF81 [Mycobacterium gilvum PYR-GCK]
          Length = 256

 Score = 49.7 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 41/97 (42%), Gaps = 7/97 (7%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           ++P L            + M  A+GTSL +I   SV     H +  +++ ++   ++   
Sbjct: 162 IIPALVVVL-------GVEMSTAIGTSLLIIIANSVAGIFSHLQSISVDWQVTGLFVAAA 214

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +T+++   + +  D   L + FA    ++   +L  
Sbjct: 215 MVTSLIAGYVGTKTDTERLQRWFAYLVFVVAGYVLID 251



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 83/242 (34%), Gaps = 39/242 (16%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     L G++ +I +      SL V+A  S +  +   R   +  ++   +     
Sbjct: 28  VPALVYGLGL-GVEQAIPI------SLIVVAAASAVGVLPKIRARQVRWRMAGIFSAAGI 80

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML------------KRDRLYCERKFPDN 156
             T+  S +  H+ +S L   FA   ++ GI ML            +   +   R  P +
Sbjct: 81  PATLAGSAISRHLPESALLIGFAAVMVVAGIRMLTDQSSTGTACEIREGEVNWRRCAPRS 140

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR-- 214
               +   +   L G  G    +    L++  G  +  A  TS  +    +   +     
Sbjct: 141 IGAGLVVGLLTGLFGVGGG--FLIIPALVVVLGVEMSTAIGTSLLIIIANSVAGIFSHLQ 198

Query: 215 -IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            I   W + GL                +  +++ + +A  +      + L   F+ ++F 
Sbjct: 199 SISVDWQVTGL---------------FVAAAMVTSLIAGYVGTKTDTERLQRWFAYLVFV 243

Query: 274 TS 275
            +
Sbjct: 244 VA 245


>gi|308813738|ref|XP_003084175.1| unnamed protein product [Ostreococcus tauri]
 gi|116056058|emb|CAL58591.1| unnamed protein product [Ostreococcus tauri]
          Length = 295

 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 32/126 (25%), Gaps = 12/126 (9%)

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
                 +      G+  G +S   G+GG +     +   G        T+          
Sbjct: 9   ASTLARSAFTIASGVTAGSVSAVTGLGGAVVFIPALSKLGYEAKHIVGTAVVAVTGATAA 68

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
                  +G               + A   +  +  + TP+   L+  +  K L      
Sbjct: 69  GSFAYAQNGVSD------------VPAATTVGLVGAMCTPVGQMLAKRLSGKTLRKALGG 116

Query: 270 IMFTTS 275
            +   S
Sbjct: 117 ALILCS 122



 Score = 43.1 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 55/151 (36%), Gaps = 8/151 (5%)

Query: 12  VFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
             L++   +      I +   +G++S + G+GG +V +P L      +G +        +
Sbjct: 4   PALARASTLARSAFTIASGVTAGSVSAVTGLGGAVVFIPAL----SKLGYEAKHI----V 55

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
           GT++  +   +      + ++G  ++        V  + T V  ++   +    L KA  
Sbjct: 56  GTAVVAVTGATAAGSFAYAQNGVSDVPAATTVGLVGAMCTPVGQMLAKRLSGKTLRKALG 115

Query: 132 IFCLLMGILMLKRDRLYCERKFPDNYVKYIW 162
              +L     + +  +    +  +    +  
Sbjct: 116 GALILCSPSAMLKKHVDEVEEPQEAKAGWAI 146


>gi|325115911|emb|CBZ51465.1| Os03g0726500 protein, related [Neospora caninum Liverpool]
          Length = 494

 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 50/135 (37%), Gaps = 16/135 (11%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             +C++++A  + G +S   G GGG + VP++         +       A  TS  ++  
Sbjct: 198 TIVCIVLIA--IVGAVSVTAGTGGGAIFVPLMQLIMHFNTFE-------ATATSQCLMTG 248

Query: 81  TSVMSFMEHRRHGT-------INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +++     +            I+M ++     +    + V  ++   +    +     + 
Sbjct: 249 SALAGLCLNFVRRNPVVDMPLIDMDMVLLLGPMQMCGSSVGVIVNRVLPAWLITVLLVVC 308

Query: 134 CLLMGILMLKRDRLY 148
            L   + +++R R  
Sbjct: 309 LLYETVRLMRRLRDK 323



 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 47/110 (42%), Gaps = 6/110 (5%)

Query: 164 MVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
            + G +S   G GGG     LM L    + ++ATATS  +    A   L +       + 
Sbjct: 206 AIVGAVSVTAGTGGGAIFVPLMQLIMHFNTFEATATSQCLMTGSALAGLCLNFVRRNPVV 265

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
            +P      +++  VL++ P+ +  + +   ++ ++    +T+   + + 
Sbjct: 266 DMP-----LIDMDMVLLLGPMQMCGSSVGVIVNRVLPAWLITVLLVVCLL 310


>gi|134297296|ref|YP_001121031.1| hypothetical protein Bcep1808_3205 [Burkholderia vietnamiensis G4]
 gi|134140453|gb|ABO56196.1| protein of unknown function DUF81 [Burkholderia vietnamiensis G4]
          Length = 259

 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 80/233 (34%), Gaps = 37/233 (15%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L   F        +    A+ T L   A T ++    H  +G ++ ++ K     
Sbjct: 27  LMTPILLIFF-------GVSPTTAIATDLWFAAITKLVGASVHHTNGNVDWQVAKRLWLG 79

Query: 107 ----LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL-----------YCER 151
                 +  V+ SL        +L KA  I  L+  I +L   +L               
Sbjct: 80  SLPMALLIVVIVSLGAQVAKVDWLTKAIGIVVLITAIGLLIAPKLVAFARGRRIGQPERF 139

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---YGASIYKATATSAGVSALIAF 208
           K     +  + G V G       VG G   ++++L+      + ++  AT    +  +A 
Sbjct: 140 KAAQPALTVMSGGVLGLCVALTSVGAGALGSVMLLYLYPLRMTPHRLVATDIVHAIPLAV 199

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
            A L  +++G                  +  +L  SI    L + L+  I  +
Sbjct: 200 VAGLGYLFAGIAD------------WWMLASLLVGSIPTVLLGSLLAGKIPGR 240


>gi|253578279|ref|ZP_04855551.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850597|gb|EES78555.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 252

 Score = 49.3 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 15/208 (7%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  +    ++    FL+G +  + G GGGL+ +P    A         + MH A+ T+  
Sbjct: 2   ELTIQTFLIVCPLVFLAGLVDSIAG-GGGLISLPAYLLA--------GVPMHNAIATNKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             A  + +S     ++  ++  +    I +  + +   + +        L         +
Sbjct: 53  SSATGTAISTARLCKNKFVDWGVALPCISMALVGSFAGAHIALLASDKILKWMLIPVLPI 112

Query: 137 MGILMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGA 190
           +   ++K+  L               +  +  +  G   G  G G G     L       
Sbjct: 113 VAFYVMKKKNLDDNSNVEISRKKQWILCAVCSLAVGCYDGFYGPGTGTFLLILYTGVAKL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSG 218
            + KA+ T    +      AL+V ++SG
Sbjct: 173 PVAKASGTMKLANLSSNIMALVVFLFSG 200


>gi|308160584|gb|EFO63064.1| Hypothetical protein GLP15_1793 [Giardia lamblia P15]
          Length = 520

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 52/150 (34%), Gaps = 18/150 (12%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V +   +++A   +G L  + G+GGGL+  P+L       GID       A   S  +IA
Sbjct: 378 VLFYVRLVLAGLFAGILGAMLGIGGGLLKNPILI----SFGIDPER----ARTASTVMIA 429

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI----------SHVDKSFLNKA 129
            TS+ S + +   G ++ +     +  +    V    +           S +        
Sbjct: 430 FTSMSSMISYTVIGGLHFEYAWPLMLTVGTFFVGGYYLSELMIRCFRTKSFIPFIITALI 489

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVK 159
               C ++  +++    +      P     
Sbjct: 490 VVCTCFIVANMIVVFIDIAKTGHLPSFTGL 519



 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 28/60 (46%)

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             + G+  G L   LG+GGG+  N +++ +G    +A   S  + A  +  +++     G
Sbjct: 384 LVLAGLFAGILGAMLGIGGGLLKNPILISFGIDPERARTASTVMIAFTSMSSMISYTVIG 443


>gi|198283724|ref|YP_002220045.1| hypothetical protein Lferr_1616 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218667265|ref|YP_002426354.1| hypothetical protein AFE_1945 [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198248245|gb|ACH83838.1| protein of unknown function DUF81 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218519478|gb|ACK80064.1| membrane protein, putative [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 252

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 94/257 (36%), Gaps = 26/257 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +A   +G ++ L G G  ++ +P L            +    A GT+   I   ++ +
Sbjct: 14  LFLAGIGAGFINVLAGAG-SMLTLPALIFV--------GLDPIAANGTNRIGILLENLTA 64

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
                 H  +++K+            ++ ++   H+   +  +   +   +    M    
Sbjct: 65  ARTFYHHNLVDLKMGIKLALWTLPGAMLGAIAGIHIGNLWFQRILVVVLAVSTATMFLPK 124

Query: 146 RLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAG 201
            +  E   PD   +   Y   +  GF  G + +G G      +  +    + +  A    
Sbjct: 125 IVTGESTRPDGDASPWLYPTLLALGFYGGFMQLGIGFLFIFALRHFLTRDLAQVAAYKTL 184

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS-YMIGK 260
           + AL   P L++  + G             V+ GA ++I    ++   LAT+L+    GK
Sbjct: 185 IIALYTLPTLVIFAWMGQ------------VHWGAGIVIGMGGMIGARLATRLTMSRRGK 232

Query: 261 KYLTIGFSMIMFTTSFV 277
            ++ +  ++++   +  
Sbjct: 233 LWVKVIMAIVILAMAAR 249


>gi|297155212|gb|ADI04924.1| hypothetical protein SBI_01803 [Streptomyces bingchenggensis BCW-1]
          Length = 248

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 37/100 (37%), Gaps = 8/100 (8%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT-INMKILKDWI 104
            + VP L  A         + M  A+GTSL VI   S+ + +        I+  +L  + 
Sbjct: 153 FLAVPALVGAL-------GLRMRAAVGTSLLVITANSLAALLARGGSAHGIDWALLAPFA 205

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
               +       + + V    L + FA   L +  LML  
Sbjct: 206 ATALLGAWDGKRLAAKVSGDVLRRVFASVLLAVAALMLID 245



 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 75/236 (31%), Gaps = 23/236 (9%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP L                 A   SL ++  TS  +   H R G +  +    +  
Sbjct: 27  VLAVPALIYLLGF-------TPAAATTASLIIVTATSATALYAHARDGNVRWRTGALFAA 79

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
              +   +  L   H+  S L  AFA+      + M +        +          G  
Sbjct: 80  AGLLPAALGGLAAGHLPPSLLTAAFALVAAAASLRMFRHAPQEEGSRPVRPGRAAGAGAG 139

Query: 166 TGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALL--VRIYSGWGLN 222
            G ++G LGVGGG      ++   G  +  A  TS  V    +  ALL       G    
Sbjct: 140 LGAVTGVLGVGGGFLAVPALVGALGLRMRAAVGTSLLVITANSLAALLARGGSAHGIDWA 199

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            L P+                ++L      +L+  +    L   F+ ++   + + 
Sbjct: 200 LLAPF-------------AATALLGAWDGKRLAAKVSGDVLRRVFASVLLAVAALM 242


>gi|82702805|ref|YP_412371.1| hypothetical protein Nmul_A1681 [Nitrosospira multiformis ATCC
           25196]
 gi|82410870|gb|ABB74979.1| Protein of unknown function DUF81 [Nitrosospira multiformis ATCC
           25196]
          Length = 276

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 54/129 (41%), Gaps = 7/129 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ +   L G + GL G GG ++ VP+L    QL G+ ++  +      +L  I+ ++ 
Sbjct: 5   IVVALFGALVGLILGLTGAGGAIIAVPLLVFGLQL-GVAEAAPI------ALFAISISAA 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +  +   + G +  +      F   + +     +   +  + L+  FA     + + M +
Sbjct: 58  IGALRALKQGRVRYRAAGFIAFTGALASPGGIYIARQIPDAALSLLFAAVLAYIALSMFR 117

Query: 144 RDRLYCERK 152
           R   + E+ 
Sbjct: 118 RLGNHSEKA 126



 Score = 38.9 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 30/90 (33%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
               +     + M   + TSL VIA  S          G++N +I   +     +  +  
Sbjct: 177 IVPALQKATRLHMRSIVSTSLAVIALVSAAGTFSAALSGSMNWRIALPFAGGTVVAMLAA 236

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
               +      L K FAI   ++   M  +
Sbjct: 237 GTFAARFTGQGLQKGFAILAAVVATGMGIK 266



 Score = 35.8 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 11/126 (8%)

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            P + V  ++G + G + G  G GG I    L++F              +    A P  L
Sbjct: 1   MPVSIVVALFGALVGLILGLTGAGGAIIAVPLLVF-----------GLQLGVAEAAPIAL 49

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             I     +  L     G V   A   I     L +P    ++  I    L++ F+ ++ 
Sbjct: 50  FAISISAAIGALRALKQGRVRYRAAGFIAFTGALASPGGIYIARQIPDAALSLLFAAVLA 109

Query: 273 TTSFVF 278
             +   
Sbjct: 110 YIALSM 115


>gi|302348341|ref|YP_003815979.1| predicted permease [Acidilobus saccharovorans 345-15]
 gi|302328753|gb|ADL18948.1| predicted permease [Acidilobus saccharovorans 345-15]
          Length = 288

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 79/256 (30%), Gaps = 45/256 (17%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
           +    L  +   I +  A G SL     TS  S   + +    N++I           ++
Sbjct: 33  TFLVPLYTLFLGIPIAYATGASLISTIATSSGSASAYVKDRITNVRIGMGLEIATTTGSI 92

Query: 113 VTSLMISHVDKSFLN----KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG----- 163
           V SL  + V    L       F +  L      ++R R    +    ++   ++      
Sbjct: 93  VGSLTAAFVYAHHLEYIIYIVFGVVLLSQIYFQMERSRFELPKPIKPDWTTRVFQLHGEY 152

Query: 164 -----------------------MVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATS 199
                                     GF+SG LG+G G    L M +     +  +T TS
Sbjct: 153 YDEALKQEVKYYGVRWWLGETIMFFAGFISGLLGIGSGALKVLGMDWAMNLPMKVSTTTS 212

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +  + A     +    G     L  ++         L +L  S+  + +  K++    
Sbjct: 213 NFMIGVTAATGSAIYWAFGLIQPILAGFT--------ALGVLLGSMTASKILPKITNR-- 262

Query: 260 KKYLTIGFSMIMFTTS 275
              +   F+ I+    
Sbjct: 263 --SIRYIFTAILAFLG 276



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F +G +SGL G+G G + V  +  A        ++ M V+  TS  +I  T+      + 
Sbjct: 176 FFAGFISGLLGIGSGALKVLGMDWAM-------NLPMKVSTTTSNFMIGVTAATGSAIYW 228

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G I   +       + + ++  S ++  +    +   F      +G+ M+ R
Sbjct: 229 AFGLIQPILAGFTALGVLLGSMTASKILPKITNRSIRYIFTAILAFLGVEMVLR 282


>gi|240102904|ref|YP_002959213.1| putative permease [Thermococcus gammatolerans EJ3]
 gi|239910458|gb|ACS33349.1| Predicted permease [Thermococcus gammatolerans EJ3]
          Length = 245

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 96/253 (37%), Gaps = 21/253 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + + +F+   +  + GVG  + +VPV+            I +  A  T L +   + + +
Sbjct: 6   LALIAFILSIVFSIGGVGSAIAIVPVMGWL--------GIPLMTAKPTGLFINTLSMLSA 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            +++ +HG ++ +     + V      V +     + K ++   F  F +  G +M+   
Sbjct: 58  TLKNIKHGKLDHRFGLPILIVATAMAPVGAYAGKFIPKVYVLWVFVAFLIYSGTMMIFFR 117

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
                          + G + GFL G LGVGGG   +  ++  G    K  AT+A V   
Sbjct: 118 PRRRGSGGNHIVEGSVIGGIAGFLGGLLGVGGGGIISPALIMLGYEPKKVAATTALVVFF 177

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY-MIGKKYLT 264
            +    L              W +G ++   +L +   +I    L T L +  +  + + 
Sbjct: 178 SSLSGFLTY------------WGMGTLDWELLLWVSIPAIAGGWLGTHLMHFKMSSEQVK 225

Query: 265 IGFSMIMFTTSFV 277
               +IM+  +  
Sbjct: 226 KVIGVIMYLIALK 238


>gi|188583353|ref|YP_001926798.1| hypothetical protein Mpop_4148 [Methylobacterium populi BJ001]
 gi|179346851|gb|ACB82263.1| protein of unknown function DUF81 [Methylobacterium populi BJ001]
          Length = 269

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 82/236 (34%), Gaps = 15/236 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP+L+    +         HVA+GTS   ++ ++  + +   R G +  +    +  
Sbjct: 31  ILAVPLLTYVVGVS------SPHVAIGTSALAVSVSAAGNLVPQWRAGNVKWRCAAAFSV 84

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
              +  +  S+    VD   L   F +  L++G LML++ R   + +             
Sbjct: 85  AGVLGALAGSVAAKAVDGQSLLALFGVVMLVVGGLMLRKRRGDGDPEVRLTKANAPV--- 141

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS--ALIAFPALLVRIYSGWGLNG 223
              L   LG+G  +         G             S    +A    LV + +      
Sbjct: 142 --LLPWLLGIGFAVGLFSGFFGIGGGFLIVPGLMLATSMPLPMAIGTSLVAVSAFGAATA 199

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG--KKYLTIGFSMIMFTTSFV 277
               + G ++     + +   +L     T+L   +   K+ LT+ F+ ++      
Sbjct: 200 ASYAASGLIDWPLAGLFILGGVLGGLAGTRLGQRLAGRKRALTVTFAGLVILVGLY 255


>gi|146296183|ref|YP_001179954.1| hypothetical protein Csac_1158 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409759|gb|ABP66763.1| protein of unknown function DUF81 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 243

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 7/131 (5%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  ++V S ++G +  L G+GGGL+++P LS  F+L        MH A    L  +  T
Sbjct: 1   MIFEVLVVSIIAGFVGSLLGIGGGLIVIPFLSIVFKLN-------MHQAAAAGLVSVIAT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  +   + +    +++I         I  V+ +++   +    L+  F I  L    LM
Sbjct: 54  SSGAASAYVKDKLTHLRIGMFLQLATVIGGVLGAILSGFLPTKILSVIFGILLLYNSFLM 113

Query: 142 LKRDRLYCERK 152
           +K      + +
Sbjct: 114 IKNRTSDEKPR 124


>gi|332668757|ref|YP_004451764.1| hypothetical protein Celf_0231 [Cellulomonas fimi ATCC 484]
 gi|332337794|gb|AEE44377.1| protein of unknown function DUF81 [Cellulomonas fimi ATCC 484]
          Length = 312

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 93/261 (35%), Gaps = 23/261 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+ +    +  + G  G+  G+      S     +G + +     A  T       T+
Sbjct: 4   LILMALVGLAAQLVDGSLGMAYGVTS----STLLLAIGTNPAA----ASATVHLAEIGTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S + H + G ++ K++        +   + + ++S++         ++  L +G  +L
Sbjct: 56  LASGVSHWKFGNVDWKVVLKVGVPGAVGAFLGATVLSNLSTEAATPVMSLVLLALGAYLL 115

Query: 143 KRDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKAT 196
            R  L+  R                G+V GF+    G G G      +L  G     K  
Sbjct: 116 VRFTLFGLRTDRQHLPLRKRFLTPLGLVAGFVDATGGGGWGPVGTPALLASGRLEPRKVI 175

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            +      L+A  A L  +++          S G VN   VL +L   ++  P+A  L  
Sbjct: 176 GSIDTSEFLVALAASLGFLFA--------IGSQG-VNFAWVLALLLGGLVAAPIAAWLVR 226

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            I  + L      ++  T+  
Sbjct: 227 HIPPRILGSAVGGVIVLTNVR 247


>gi|116748091|ref|YP_844778.1| hypothetical protein Sfum_0644 [Syntrophobacter fumaroxidans MPOB]
 gi|116697155|gb|ABK16343.1| protein of unknown function DUF81 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 417

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 104/297 (35%), Gaps = 68/297 (22%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              + +     +G ++G  G GGG ++ P L        +   +   +A+GT L  I   
Sbjct: 73  IFVVSMAIGLAAGLITGCIGAGGGFIITPAL--------MAAGVKGILAVGTDLFHIFAK 124

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS-------HVDKSFLNKAFAIFC 134
           ++M    H++ G ++ K+   ++      T +   +          + ++F++  +AI  
Sbjct: 125 AIMGTAVHKKLGNVSTKLAVAFLVGSAGGTFIGGALNKGLYNKDPLLSEAFISAVYAILL 184

Query: 135 LLMGILML-----------------------------------------KRDRLYCERKF 153
             +G   L                                           +      K 
Sbjct: 185 GFLGFYALIDFLRSRKAPGGGGDAHGGGPSGTPSVALKLQSMNLPPMIQFDEDFVPGGKR 244

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
               V  + G+V G L+  +GVGGG  T  + ++             GVS++      ++
Sbjct: 245 ISGVVVALGGVVVGILAAIMGVGGGFVTFPMFVYI-----------FGVSSMTTVGTDIL 293

Query: 214 RIYSGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           +I    GL  +  +++ G+V     + +L  S+    +    + ++   ++   +++
Sbjct: 294 QIIFTAGLAAIGQYAIYGYVFYTLAMGMLIGSLFGIQVGALTTKVVKGIHIRGFYAV 350



 Score = 39.3 bits (91), Expect = 0.69,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 8/102 (7%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR-HG 93
            L+ + GVGGG V  P+    F        +     +GT +  I  T+ ++ +     +G
Sbjct: 259 ILAAIMGVGGGFVTFPMFVYIF-------GVSSMTTVGTDILQIIFTAGLAAIGQYAIYG 311

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            +   +    +        V +L    V    +   +A+  +
Sbjct: 312 YVFYTLAMGMLIGSLFGIQVGALTTKVVKGIHIRGFYAVSII 353


>gi|332296161|ref|YP_004438084.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
 gi|332179264|gb|AEE14953.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
          Length = 118

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 32/82 (39%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
                  A  TSLG I P  +   + +  +G  N+           +   + S  +    
Sbjct: 37  AEYSQKEAHATSLGAIIPAGIAGALIYNVNGLNNLADSIYLALGGILGAQIGSRAMYKFS 96

Query: 123 KSFLNKAFAIFCLLMGILMLKR 144
             +L KAF +F LLM I M+ +
Sbjct: 97  NKWLRKAFGVFLLLMSIRMVLK 118



 Score = 42.0 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 13/100 (13%)

Query: 180 FTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
               L+  Y   S  +A ATS G          L+   +G              N+   +
Sbjct: 28  VFVPLLTNYAEYSQKEAHATSLGAIIPAGIAGALIYNVNGLN------------NLADSI 75

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +    IL   + ++  Y    K+L   F + +   S   
Sbjct: 76  YLALGGILGAQIGSRAMYKFSNKWLRKAFGVFLLLMSIRM 115


>gi|328952927|ref|YP_004370261.1| protein of unknown function DUF81 [Desulfobacca acetoxidans DSM
           11109]
 gi|328453251|gb|AEB09080.1| protein of unknown function DUF81 [Desulfobacca acetoxidans DSM
           11109]
          Length = 355

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 98/289 (33%), Gaps = 56/289 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  + +  F+ G +SG  G GG  V+ P +            +   VA+ +++    P +
Sbjct: 16  ISFLFIVGFIGGLVSGFIGSGGAFVLTPGMMSL--------GVAGPVAVASNMCHKFPKA 67

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF--------LNKAFAIFC 134
           ++   +  ++G +++K+         +   +   +   +  ++        ++ +F +  
Sbjct: 68  MVGAYKRWKYGQVDIKMGLIMASSASVGVYLGIKVQEMILAAWGQAGSNLYVSISFVVVL 127

Query: 135 LLMGILMLKRDR----------------------------LYCERKFPDNYVKYIWGMVT 166
           +++G  +                                           +     G  T
Sbjct: 128 IVVGGYVFWDAMKSDRSEKTELTVTLAQKLQKINLPPMIYFKTADVNISLWFVLPVGFAT 187

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G L+  + VGG I    ++   GAS   ++AT   V+ ++ F   +     G        
Sbjct: 188 GVLAATIAVGGFIGVPGMIYVIGASSLISSATELVVAFIMGFGGTVKWAIMGM------- 240

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                V+I   LIIL  S+L   L    +  + +  + I    IM   +
Sbjct: 241 -----VDIRLTLIILAGSLLGVQLGAIGTTYVKEHMIKIVMGTIMLIVA 284



 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 48/133 (36%), Gaps = 8/133 (6%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
           N   M++     V   +  ++   F +G L+    VG G + VP +        +     
Sbjct: 161 NLPPMIYFKTADVNISLWFVLPVGFATGVLAATIAVG-GFIGVPGMIYVIGASSL----- 214

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
             ++  T L V         ++    G +++++    +    +   + ++  ++V +  +
Sbjct: 215 --ISSATELVVAFIMGFGGTVKWAIMGMVDIRLTLIILAGSLLGVQLGAIGTTYVKEHMI 272

Query: 127 NKAFAIFCLLMGI 139
                   L++ +
Sbjct: 273 KIVMGTIMLIVAV 285


>gi|309811509|ref|ZP_07705291.1| putative membrane protein [Dermacoccus sp. Ellin185]
 gi|308434560|gb|EFP58410.1| putative membrane protein [Dermacoccus sp. Ellin185]
          Length = 263

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 69/183 (37%), Gaps = 13/183 (7%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGLV +P L  AF        +  +      LG I  TSV S   + R    +++    
Sbjct: 28  GGGLVQLPALMVAFPHAAPAQLLATNK-----LGSICGTSVSSA-TYLRRVRPDLRTALP 81

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK--- 159
              +    ++  + + SH+ +S  N    +  + +G   L +  +           +   
Sbjct: 82  LAVMAFAGSMAGAALASHIPRSAFNPIILVVLVAVGAYTLFKPSMGQLENLRHAGSRRHY 141

Query: 160 ---YIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
                 G+  G   GALG G G F    L+   G    +A+A +   +      AL+V I
Sbjct: 142 ATAGAVGLGVGLYDGALGPGTGSFFVFALVSLLGYRFLEASAKAKLANFATNLAALVVFI 201

Query: 216 YSG 218
            +G
Sbjct: 202 PAG 204


>gi|71908535|ref|YP_286122.1| hypothetical protein Daro_2922 [Dechloromonas aromatica RCB]
 gi|71848156|gb|AAZ47652.1| conserved hypothetical protein [Dechloromonas aromatica RCB]
          Length = 127

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-TS 82
            + I    + G  +G+FG+GGG+++VP L               H+A GT+L V+ P   
Sbjct: 5   LIFIFIGLIGGLAAGVFGIGGGVIIVPALVYW-------AGFSQHMATGTTLAVLLPPIG 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +  E+ RHG ++++        + +   + + + + ++  +L+  F +F   +G+ ++
Sbjct: 58  LAAAYEYYRHGHVDIRAAIILAATMFLGAWLGAFLANRMNAEYLHLIFGLFVCGLGLFLV 117

Query: 143 K 143
           +
Sbjct: 118 R 118


>gi|116750711|ref|YP_847398.1| hypothetical protein Sfum_3290 [Syntrophobacter fumaroxidans MPOB]
 gi|116699775|gb|ABK18963.1| conserved hypothetical protein [Syntrophobacter fumaroxidans MPOB]
          Length = 129

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 8/119 (6%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           ++ F  ++  V+ + L  +  F+   LS +FG GGG  MVP+++   +L        M V
Sbjct: 2   VVEFWGQEFNVN-VILGCIGGFVIAVLSSMFGFGGGPFMVPLMTVGLRL-------PMFV 53

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
            +G+SL  I   +V+    H + G  ++           +   +   +   V    + +
Sbjct: 54  VVGSSLLAIFFNTVVGSARHFQFGNFDLIFFLVMFPAAILGGYIAPQIAKRVSPLVVKR 112


>gi|254389028|ref|ZP_05004258.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294812515|ref|ZP_06771158.1| DUF81 domain-containing protein [Streptomyces clavuligerus ATCC
           27064]
 gi|326441031|ref|ZP_08215765.1| hypothetical protein SclaA2_08180 [Streptomyces clavuligerus ATCC
           27064]
 gi|197702745|gb|EDY48557.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294325114|gb|EFG06757.1| DUF81 domain-containing protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 261

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 59/194 (30%), Gaps = 21/194 (10%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+  V    +  + +   R   ++++            +   +   + +    L    
Sbjct: 50  LGTNKAVAIVGTTGAAVTFLRKARVDVRTAARIGLAALAGSTAGAFFAAGISSEVLRPVI 109

Query: 131 AIFCLLMGILMLKRDRLYCERK--------FPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
               L +   +L R       +            +   + G   GF  G  G G G F  
Sbjct: 110 MAVLLGVAAFVLLRPGFGAVPQERRRAVTRARTVFAIVVVGGGIGFYDGLFGPGTGTFLV 169

Query: 183 LLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
           L +       +  A+AT+  V+      AL +  + G             V      ++ 
Sbjct: 170 LALTAVLHLDLVTASATAKIVNVCTNAGALAMFAFQGS------------VLWQLAAVLA 217

Query: 242 PISILITPLATKLS 255
             ++L   +  +++
Sbjct: 218 VFNLLGATVGARMA 231


>gi|260564887|ref|ZP_05835372.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260567914|ref|ZP_05838383.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|261217418|ref|ZP_05931699.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261220646|ref|ZP_05934927.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261320292|ref|ZP_05959489.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261322944|ref|ZP_05962141.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261750519|ref|ZP_05994228.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261753777|ref|ZP_05997486.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|261757019|ref|ZP_06000728.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|265985083|ref|ZP_06097818.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|265990119|ref|ZP_06102676.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265992771|ref|ZP_06105328.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|265996005|ref|ZP_06108562.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|265999047|ref|ZP_05464805.2| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|306837316|ref|ZP_07470198.1| permease [Brucella sp. NF 2653]
 gi|260152530|gb|EEW87623.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260154579|gb|EEW89660.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260919230|gb|EEX85883.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|260922507|gb|EEX89075.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261292982|gb|EEX96478.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261298924|gb|EEY02421.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261737003|gb|EEY24999.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|261740272|gb|EEY28198.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261743530|gb|EEY31456.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|262550302|gb|EEZ06463.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|262763641|gb|EEZ09673.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263000788|gb|EEZ13478.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263092000|gb|EEZ16297.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|264663675|gb|EEZ33936.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306407593|gb|EFM63790.1| permease [Brucella sp. NF 2653]
 gi|326410977|gb|ADZ68041.1| conserved hypothetical protein [Brucella melitensis M28]
 gi|326554268|gb|ADZ88907.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 306

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 89/273 (32%), Gaps = 56/273 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G LSGLFGVGGG ++ P+L           +I   +A+ T    +  +S
Sbjct: 14  MLVLLGMGAAVGFLSGLFGVGGGFLITPLLIFY--------NIPPAIAVATGANQVIASS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
           V   + H +  T+++K+    +    + +++   + S +         ++  +  F   +
Sbjct: 66  VSGALAHFKRRTLDIKLGLFLVAGGILGSLIGIFVFSWLRDLGQLDLIVSILYVFFLGTI 125

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R      +         G   
Sbjct: 126 GGLMLVESVQALRRAKKGQGGAVRRSGQHTWIHRLPFKMRFRASTIYVSVIPVLGIGFFI 185

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G LS  +GVGGG      +++           TS      +     +++  +        
Sbjct: 186 GLLSSVMGVGGGFIMVPALIYLLHVPTNVVVGTSLFQITFVTAFTTVMQATTNQS----- 240

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 ++I    +++   ++      +    +
Sbjct: 241 ------IDIVLAFLLMVGGVIGAQYGARAGRKL 267


>gi|256830438|ref|YP_003159166.1| hypothetical protein Dbac_2673 [Desulfomicrobium baculatum DSM
           4028]
 gi|256579614|gb|ACU90750.1| protein of unknown function DUF81 [Desulfomicrobium baculatum DSM
           4028]
          Length = 349

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 103/289 (35%), Gaps = 56/289 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  + +  F+ G +SG  G GG  V+ P +            +   VA+ +++    P +
Sbjct: 19  ITFLFLVGFIGGLVSGFIGSGGAFVLTPGMMSL--------GVPGTVAVASNMCHKFPKA 70

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVT--------SLMISHVDKSFLNKAFAIFC 134
           ++  ++  R+G +++K+         I   +         ++  S     +++ +F +  
Sbjct: 71  LVGAIKRFRYGQVDVKMGLIMAASAGIGVQIGIKIQQVILAMWGSAGSDLYVSTSFVLVL 130

Query: 135 LLMG----------------------ILMLKRDRLYCERKFPDN------YVKYIWGMVT 166
           +L+G                         L++  L+    FP +      +     G  T
Sbjct: 131 VLVGGYVMKDAIKCARCGGEEETTALAKRLQKIELWPMINFPRSGLRISLWFTLPVGFAT 190

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G L+  + VGG I    ++   G     A+AT   ++  +     +     G        
Sbjct: 191 GMLAATIAVGGFIGVPGMIYVLGVPGLMASATELVIAFAMGLGGSINWAMHGM------- 243

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                V+I  VLIIL  S+L   L    +  +    + +  + IM   +
Sbjct: 244 -----VDIRLVLIILGGSLLGVQLGAIGTTYVKPHMIKMVMATIMLIVA 287



 Score = 38.9 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 50/129 (38%), Gaps = 8/129 (6%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M+   +  +   +   +   F +G L+    VG G + VP +     + G+       +A
Sbjct: 168 MINFPRSGLRISLWFTLPVGFATGMLAATIAVG-GFIGVPGMIYVLGVPGL-------MA 219

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
             T L +     +   +    HG ++++++   +    +   + ++  ++V    +    
Sbjct: 220 SATELVIAFAMGLGGSINWAMHGMVDIRLVLIILGGSLLGVQLGAIGTTYVKPHMIKMVM 279

Query: 131 AIFCLLMGI 139
           A   L++ +
Sbjct: 280 ATIMLIVAV 288


>gi|20807593|ref|NP_622764.1| permease [Thermoanaerobacter tengcongensis MB4]
 gi|20516132|gb|AAM24368.1| predicted permease [Thermoanaerobacter tengcongensis MB4]
          Length = 118

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 50/117 (42%), Gaps = 7/117 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +    +G ++GL G GGG ++VP L            I  H A  T++ +I P +V+S
Sbjct: 7   LFLIGTATGFINGLLGAGGGTLIVPALVFLL-------GIEDHKAHATAISIILPLTVIS 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              + +   I++ +  +      +  ++ +  ++ +    L K F +  +     M 
Sbjct: 60  SFIYLQSKIIDLPLTVNVAIGETLGGIIGAYFLNKISIPLLRKIFGVIMITAAFRMW 116


>gi|306841653|ref|ZP_07474342.1| permease [Brucella sp. BO2]
 gi|306288266|gb|EFM59646.1| permease [Brucella sp. BO2]
          Length = 293

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 88/273 (32%), Gaps = 56/273 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G LSGLFGVGGG ++ P+L           +I   +A+ T    +  +S
Sbjct: 1   MLVLLGMGAAVGFLSGLFGVGGGFLITPLLIFY--------NIPPAIAVATGANQVIASS 52

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
           V   + H +  T+++K+    +    +  ++   + S +         ++  +  F   +
Sbjct: 53  VSGALAHFKRRTLDIKLGLFLVAGGILGALIGIFVFSWLRDLGQLDLIVSILYVFFLGTI 112

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R      +         G   
Sbjct: 113 GGLMLVESVQALRRAKKGQGGAVRRSGQHTWIHRLPFKMRFRASTIYVSVIPVLGIGFFI 172

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G LS  +GVGGG      +++           TS      +     +++  +        
Sbjct: 173 GLLSSVMGVGGGFIMVPALIYLLHVPTNVVVGTSLFQITFVTAFTTVMQATTNQS----- 227

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 ++I    +++   ++      +    +
Sbjct: 228 ------IDIVLAFLLMVGGVIGAQYGARAGRKL 254


>gi|182678909|ref|YP_001833055.1| hypothetical protein Bind_1943 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182634792|gb|ACB95566.1| protein of unknown function DUF81 [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 260

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 88/259 (33%), Gaps = 23/259 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +++  LSG   G+ G GG ++  P+L     L         HVA+GT    ++  + 
Sbjct: 7   TLALLSGALSGFSLGVVGGGGSVLATPLLLYLVGLA------PAHVAIGTGAVAVSVNAY 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +SF      G I  +    +  +  I   + S +   ++   +   F    + +G+ ML+
Sbjct: 61  VSFFSQIGSGRIRWRAAVLFALIGTIGAFIGSTLGKSLNGDKIIFLFGFAMVGIGLTMLR 120

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI---FTNLLMLFYGASIYKATATSA 200
                      D     I          A   G G        L+L  G  +  A ATS 
Sbjct: 121 PIHAEKMDADADTRFSTIILAALAVGLAAGFFGIGGGVLVVPGLVLATGMPMINAVATSL 180

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG- 259
                      +    SG             ++    L  +   I+   L  K +Y +  
Sbjct: 181 LAVGTFGLTTAINYAVSGL------------IDWRIALEFILGGIMGGFLGVKAAYFLSR 228

Query: 260 -KKYLTIGFSMIMFTTSFV 277
            K  L   FS+++F+ +  
Sbjct: 229 YKGALNKAFSLLIFSVAAY 247


>gi|332978439|gb|EGK15154.1| hypothetical protein HMPREF9373_0360 [Psychrobacter sp. 1501(2011)]
          Length = 260

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 80/257 (31%), Gaps = 23/257 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++  + +   L+  +S + G GG L+++P  S           I        +LG     
Sbjct: 18  HLASLFILGVLAFVISTISGGGGALILIPATSALIGAPAAPPVI--------NLGTFISR 69

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                M       I+  + K ++    I   +  L+ S ++ S++     IF +      
Sbjct: 70  PSRMLMFWH---DIDWGLTKYYVPSAIIGAGLAGLLFSRLNASWIQLLVGIFLVSTLFQ- 125

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
            K  ++      P        G +  F+S  +G  G +     M   G       AT   
Sbjct: 126 YKFGKIDKTFNMP-KAGFIPLGFIVAFISTIVGGLGPVLNPFYMNA-GLQKEDLIATKTA 183

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
            S  +    +    + G     L             L++   ++L   +  +    +  +
Sbjct: 184 NSFFVGIAQIGSYAFFGVLTAKL---------WIYGLVLGLGAVLGNYIGKRFLAGMSVQ 234

Query: 262 YLTIGFSMIMFTTSFVF 278
              +   ++M  +    
Sbjct: 235 QFRLLLLILMTVSGLYM 251


>gi|323139793|ref|ZP_08074828.1| protein of unknown function DUF81 [Methylocystis sp. ATCC 49242]
 gi|322394965|gb|EFX97531.1| protein of unknown function DUF81 [Methylocystis sp. ATCC 49242]
          Length = 273

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 69/189 (36%), Gaps = 13/189 (6%)

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
           ++  I+ + +    +   V +     +  + L    AI  L++ ++++     +      
Sbjct: 87  VHWPIVVNLLAGSLLGAWVGAGWAIRLKSAILYHVIAILLLMIALVLIFGHDPHGGGTAL 146

Query: 155 DNYV-----KYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAF 208
            +           G V G ++  LGV GG +    L+L +G  I  A + S  VS     
Sbjct: 147 ASGGFQLIAGVAAGFVIGVVASLLGVAGGELLIPTLVLLFGVDIKLAGSLSLAVSLPTMI 206

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
                        +    +S+   +   VL+I   SI+ T +  +L  +I    L    +
Sbjct: 207 VGFTRY-------SRDQSFSILKRSRSFVLVIALGSIVGTFIGGQLLGIIPSSILLPLLA 259

Query: 269 MIMFTTSFV 277
            I+  ++  
Sbjct: 260 GILIASAIK 268



 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 12/126 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +   + A F+ G ++ L GV GG +++P L   F        + + +A   SL V  PT 
Sbjct: 153 LIAGVAAGFVIGVVASLLGVAGGELLIPTLVLLF-------GVDIKLAGSLSLAVSLPTM 205

Query: 83  VMSFMEHRRHGTINM-----KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           ++ F  + R  + ++       +        + T +   ++  +  S L    A   +  
Sbjct: 206 IVGFTRYSRDQSFSILKRSRSFVLVIALGSIVGTFIGGQLLGIIPSSILLPLLAGILIAS 265

Query: 138 GILMLK 143
            I + +
Sbjct: 266 AIKVWR 271


>gi|294944269|ref|XP_002784171.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239897205|gb|EER15967.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 409

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 42/111 (37%), Gaps = 12/111 (10%)

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           +V G +S  +G+ GG+F   ++L  G    +ATAT++ V    +    L     G+    
Sbjct: 277 IVIGLISSIVGISGGLFMIPVVLSLGLDPKQATATTSIVIFATSTSTALSFALGGYFPPA 336

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
              W            I+ +  +   L   +   +  K   +   +++  T
Sbjct: 337 SDLW------------IVVMPFIGALLGKTIVARLIAKTGRMSILVLLLGT 375



 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 13/121 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++ +  + G +S + G+ GGL M+PV+       G+D       A  T+  VI  TS 
Sbjct: 270 LVLMTSMIVIGLISSIVGISGGLFMIPVVLSL----GLDP----KQATATTSIVIFATST 321

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFCLLMG 138
            + +     G          + +  I  ++   +++ +         L        ++ G
Sbjct: 322 STALSFALGGYFPPASDLWIVVMPFIGALLGKTIVARLIAKTGRMSILVLLLGTVVIIGG 381

Query: 139 I 139
           I
Sbjct: 382 I 382


>gi|227494337|ref|ZP_03924653.1| membrane permease protein [Actinomyces coleocanis DSM 15436]
 gi|226832071|gb|EEH64454.1| membrane permease protein [Actinomyces coleocanis DSM 15436]
          Length = 265

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 88/248 (35%), Gaps = 35/248 (14%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L               H A   SL ++  T++ +     R G +  K    + FV  
Sbjct: 30  VPALIYLL-------GQSPHGAATGSLVIVLATALTALPGRIRKGNVRFKDGLVFAFVSM 82

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW------ 162
           + + + + +   V    L  AFAI   +MGI+ML++  L  +R                 
Sbjct: 83  VGSFLGAKVAGQVSGDILLTAFAIMITIMGIIMLRKGLLEAKRYKETQAGLVAAAEEKLF 142

Query: 163 --GMVTGFLSGALG---------VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
             G+    L+              GG I   +L L  G +I +A  TS  +  L A   L
Sbjct: 143 RRGLPAIALAALFTGFLTGFFGVGGGFIVVPMLTLVLGFNIREAAGTSLLIMILAAASGL 202

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           L R    WG   +       V+   V   +  S+  + +   LS       LT+ F+ ++
Sbjct: 203 LSR----WGQPVV-------VDWWVVFAFMAGSMSGSFIGGPLSQKAKPHMLTLIFAALL 251

Query: 272 FTTSFVFA 279
                V A
Sbjct: 252 GAVGVVTA 259


>gi|159478887|ref|XP_001697532.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158274411|gb|EDP00194.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 334

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++    ++G  SGL G+GGG ++ P+L+       I   +     +GTSL  +   S+
Sbjct: 182 AVLVATGTVAGFASGLLGIGGGTIVTPLLT-------IATGLPQLSVLGTSLAAMVAPSL 234

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   +H R G +++ +    +    + +   S +   +    L   F I  L +G   L
Sbjct: 235 IGLAQHARMGNVDVLMAAGLVLGTTLGSSAGSRLALELPDGVLEWVFCIGMLYLGRKTL 293


>gi|153011358|ref|YP_001372572.1| hypothetical protein Oant_4039 [Ochrobactrum anthropi ATCC 49188]
 gi|151563246|gb|ABS16743.1| protein of unknown function DUF81 [Ochrobactrum anthropi ATCC
           49188]
          Length = 306

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 89/273 (32%), Gaps = 56/273 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G LSGLFGVGGG ++ P+L           +I   +A+ T    +  +S
Sbjct: 14  MLVLLGMGAAVGFLSGLFGVGGGFLITPLLIFY--------NIPPAIAVATGANQVIASS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
           V   + H +  T+++K+    +    + ++V   + S +         ++  +  F   +
Sbjct: 66  VSGALAHFKRRTLDIKLGLFLVAGGVLGSLVGIFVFSWLRDLGQLDLIVSILYVFFLGTV 125

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R      +         G   
Sbjct: 126 GGLMLVESLRAMRRVKKGQAGAVRRSGQHTWIHRLPFKMRFRASTIYVSIIPVLGIGFFI 185

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G LS  +GVGGG      +++           TS      +     +++  +        
Sbjct: 186 GLLSSVMGVGGGFIMVPALIYLLHVPTNVVVGTSLFQITFVTAVTTVLQATTNQS----- 240

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 ++I    +++   ++      +    +
Sbjct: 241 ------IDIVLAFLLMVGGVIGAQYGARAGQKL 267



 Score = 43.5 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 8/103 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-T 81
           I  ++   F  G LS + GVGGG +MVP L            +  +V +GTSL  I   T
Sbjct: 175 IIPVLGIGFFIGLLSSVMGVGGGFIMVPALIYLLH-------VPTNVVVGTSLFQITFVT 227

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +V + ++   + +I++ +    +    I     +     +   
Sbjct: 228 AVTTVLQATTNQSIDIVLAFLLMVGGVIGAQYGARAGQKLRGE 270


>gi|330903411|gb|EGH33983.1| hypothetical protein PSYJA_35699 [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 146

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 41/101 (40%), Gaps = 7/101 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V++P L++          + M   + TSL VIA  S+ S +     G ++  +   +  
Sbjct: 53  FVIIPALTRY-------SDLDMKSVVATSLAVIALVSMGSVITASLSGVMHWAVGAPFAL 105

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
              I  V+   +  ++    L + FA+  ++   ++    R
Sbjct: 106 GAVIGLVIGRQVARYLAGPRLQQLFAVCGIVAAFMLALSVR 146


>gi|327188803|gb|EGE55997.1| putative transmembrane permease protein [Rhizobium etli CNPAF512]
          Length = 351

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 76/265 (28%), Gaps = 30/265 (11%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +    + A  L G   G  G    L+ +P L+           +    A    L ++ 
Sbjct: 102 LSFYYAAVPAVLLVGLAKGGMGDALSLIGLPFLALV---------VSPVEAAAILLPILV 152

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              ++S +  R+HG  +   LK  +        +     + V  + L        +L  +
Sbjct: 153 FMDMISLVVWRKHG--DWTTLKIMLPGAIFGIGLGWATSALVPGNILRIVIGAVTILFCL 210

Query: 140 -LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSG---ALGVGGGIFTNLLMLFYGASIYKA 195
                       R  P    + I     G  SG    +   GG    +  L       + 
Sbjct: 211 RYFWNNFGPGAGRVVPPRGQRPIAAGFWGAFSGYGSFVAHAGGAPFQVYALPLKLQPREY 270

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           T TS    A++    L+     G                   L      +   PL   L+
Sbjct: 271 TGTSVRFFAILNAVKLIPYFALGQLDTQN-------------LATSATLLPFAPL-ATLA 316

Query: 256 YMIGKKYLT-IGFSMIMFTTSFVFA 279
                + +    F   M+  +F+ A
Sbjct: 317 GAWCVRRMKPEIFYPFMYAMAFIAA 341


>gi|295091408|emb|CBK77515.1| Predicted permeases [Clostridium cf. saccharolyticum K10]
          Length = 257

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 67/206 (32%), Gaps = 16/206 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I  +    FL+  +  + G GGGLV +P              + +H A   +     
Sbjct: 4   LQMILFLCPIFFLTSFMDAVSG-GGGLVALPAYLF--------TGLPVHNAYACNKVGCL 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  SF+   ++G I+ K       V    +   + ++ H+    L          + +
Sbjct: 55  VGNFTSFVRFLKNGLIDGKTAIGVGVVTFFCSACGAQLVLHLPDRPLKIMILASMPAVAL 114

Query: 140 LMLKRDRLYCERKFPDNYV------KYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASI 192
           L+    +     +  +           + G++ GF  G LG G G    LL        +
Sbjct: 115 LIFMSRKYPQVNRTEEIKGWKRIRACLLTGVIMGFYDGVLGPGSGTVVILLFTKLLKYDL 174

Query: 193 YKATATSAGVSALIAFPALLVRIYSG 218
             A+  +          A    I +G
Sbjct: 175 KTASGNAKAALLASTVAASASYILAG 200



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 41/119 (34%), Gaps = 7/119 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   ++   + G   G+ G G G V++ + +K  +         +  A G +   +  ++
Sbjct: 137 IRACLLTGVIMGFYDGVLGPGSGTVVILLFTKLLKYD-------LKTASGNAKAALLAST 189

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           V +   +   G +   +         +   V + M       F+     +   L+ + M
Sbjct: 190 VAASASYILAGKVVWTVAVPVSVFGILGGYVGAGMAIKKGAQFIRPMMLLIAALLIVKM 248


>gi|218532050|ref|YP_002422866.1| hypothetical protein Mchl_4144 [Methylobacterium chloromethanicum
           CM4]
 gi|218524353|gb|ACK84938.1| protein of unknown function DUF81 [Methylobacterium
           chloromethanicum CM4]
          Length = 260

 Score = 49.3 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 89/267 (33%), Gaps = 29/267 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L +++    G   GL G GG ++  P+L      +G+      HVA+GT    +A ++
Sbjct: 3   VVLALLSGGFVGFSLGLIGGGGSILATPLLLYV---VGVGQP---HVAIGTGALAVAVSA 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +F  H R G +       +     +  +  S +    D   L   FA+  + +G+LML
Sbjct: 57  MANFSGHWRAGNVRWGNALVFAAFGVVGALGGSTLGKAFDGERLLFLFALLMIAVGLLML 116

Query: 143 KRDRLY---------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
           +                       +  +   V G        GG +    L+   G  + 
Sbjct: 117 RSGERNGSGRAATGAPSAPAFTPRLAAVALAVGGASGFFGIGGGFLIVPGLVFATGMPMI 176

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A  TS                 SG             ++       +   +L   +  +
Sbjct: 177 NAIGTSLFAVGAFGLATAANYALSGL------------IDWPVAAQYIVGGLLGGWVGMR 224

Query: 254 LSYMIGKKY--LTIGFSMIMFTTSFVF 278
           L+  +  +   L   F+ ++FT +   
Sbjct: 225 LACRLAGRKGALDRIFASLIFTVAAYM 251


>gi|288923054|ref|ZP_06417207.1| protein of unknown function DUF81 [Frankia sp. EUN1f]
 gi|288345604|gb|EFC79980.1| protein of unknown function DUF81 [Frankia sp. EUN1f]
          Length = 313

 Score = 49.3 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 76/217 (35%), Gaps = 25/217 (11%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++   L+ +A  L G + GL G+GGG +M P+L   F +  +        A+ + L   A
Sbjct: 1   MEIDPLVTLAGVLVGFVVGLTGMGGGALMTPILVLLFGVQPLA-------AVSSDLVASA 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-----DKSFLNKAFAIFC 134
               +    H R GT++  ++   +           L++  +      +  +        
Sbjct: 54  VMKPVGATVHLRRGTVHRGLVTWLVLGSVPAGFCGVLILRAMGDGETVQDRMKIFMGAIL 113

Query: 135 LLMGILMLKRDRLYCERKF-----------PDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
           ++  + ML +  L   R                      G+V G + G   VG G    +
Sbjct: 114 IVAALAMLAKAELDRRRGPAPADDAAVEVTVRPLPTLAVGVVGGLVVGMTSVGSGSLIIV 173

Query: 184 LMLFYGASIYKA--TATSAGVSALIAFPALLVRIYSG 218
           L+L    SI  +    T    +  +   A L  +  G
Sbjct: 174 LLLALYPSIRASQLVGTDLAQAVPLVAAASLGHLLFG 210


>gi|293189219|ref|ZP_06607942.1| Dub81-like protein [Actinomyces odontolyticus F0309]
 gi|292821682|gb|EFF80618.1| Dub81-like protein [Actinomyces odontolyticus F0309]
          Length = 266

 Score = 49.3 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 93/264 (35%), Gaps = 23/264 (8%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           S+   +  I L+ +    +G LSGLFGVGGGLV+VP L            +    A  TS
Sbjct: 6   SQPLTLKRILLVALTGVGAGFLSGLFGVGGGLVIVPALMAVL-------GMDQRRASATS 58

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           L  I  T+ +    +  HG ++       +      + +   ++  +    L      F 
Sbjct: 59  LAAIIVTAAVGSGSYALHGEVSWAGAALLVVGALAGSQIGVWLLRRLPAPALPWILIGFT 118

Query: 135 LLMGILMLKRDRLYCERKFPDN---YVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGA 190
           + + +                     +  + G+  G LSG +GVGGG      M L  GA
Sbjct: 119 VFVIVSQYLHVPTREGSVLLTPASCALMILVGLCAGILSGLVGVGGGSVIVPGMELAVGA 178

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
               A  TS  V         +  +                V++   L++   +   TP+
Sbjct: 179 GDLIARGTSLLVMIPTGIAGTVTNLRHRM------------VDLRVGLVVGVSAAAATPV 226

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTT 274
              ++  +      I F++ + + 
Sbjct: 227 GRLVATWVSPSVGAILFNVFLLSI 250



 Score = 38.9 bits (90), Expect = 0.84,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 7/129 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+I+    +G LSGL GVGGG V+VP +  A     +       +A GTSL V+ PT +
Sbjct: 144 ALMILVGLCAGILSGLVGVGGGSVIVPGMELAVGAGDL-------IARGTSLLVMIPTGI 196

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + + RH  +++++           T V  L+ + V  S     F +F L +    + 
Sbjct: 197 AGTVTNLRHRMVDLRVGLVVGVSAAAATPVGRLVATWVSPSVGAILFNVFLLSIIASTVL 256

Query: 144 RDRLYCERK 152
           + R     +
Sbjct: 257 KMRRKARAQ 265


>gi|71083541|ref|YP_266260.1| putative transmembrane permease [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062654|gb|AAZ21657.1| putative transmembrane permease [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 360

 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 57/286 (19%), Positives = 100/286 (34%), Gaps = 55/286 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + VFL    V      I++ S + G LSGLFGVGGG +M P L       G+  +     
Sbjct: 1   MDVFLPIAQVFVNPIEILLLSAIVGVLSGLFGVGGGFLMTPFLIFL----GVPPAY---- 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+      I  TSV     H    T++ K+    +    I T +     ++        +
Sbjct: 53  AVANEANNILATSVSGSTTHYLKNTLDYKMGLMIVIGGSIGTALGIYTFTYFKGIGKIDT 112

Query: 125 FLNKAFAIFCLLMGILML------------------------------KRDRLYCERKFP 154
            ++ A+     ++G LML                               R R    + + 
Sbjct: 113 VISLAYMYILAIIGTLMLVESLREIDRAKRNLVVKKKLHVHYWIHGLPLRMRFPKSKLYE 172

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLV 213
             +   I G+V GF++  +G+GG       M++           TS  V+  ++     +
Sbjct: 173 SIFTPIIIGLVVGFIAAIMGIGGAFILVPAMIYIIKMPTKLVPGTSLFVTIFVSVIVTFL 232

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
              +            G +++  V +++  SI+      KL   I 
Sbjct: 233 HSIN-----------FGSIDLMLVFMLVIGSIVGVQAGQKLGEKID 267



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 49/121 (40%), Gaps = 8/121 (6%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           ++   L +   K  + + I   I+   + G ++ + G+GG  ++VP +    +       
Sbjct: 156 IHGLPLRMRFPKSKLYESIFTPIIIGLVVGFIAAIMGIGGAFILVPAMIYIIK------- 208

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEH-RRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           +   +  GTSL V    SV+    H    G+I++ ++   +    +       +   +D 
Sbjct: 209 MPTKLVPGTSLFVTIFVSVIVTFLHSINFGSIDLMLVFMLVIGSIVGVQAGQKLGEKIDS 268

Query: 124 S 124
           S
Sbjct: 269 S 269


>gi|189022597|ref|YP_001932338.1| Protein of unknown function DUF81 [Brucella abortus S19]
 gi|260544578|ref|ZP_05820399.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260756422|ref|ZP_05868770.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260759854|ref|ZP_05872202.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260882245|ref|ZP_05893859.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261216268|ref|ZP_05930549.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|189021171|gb|ACD73892.1| Protein of unknown function DUF81 [Brucella abortus S19]
 gi|260097849|gb|EEW81723.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260670172|gb|EEX57112.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260676530|gb|EEX63351.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260871773|gb|EEX78842.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260917875|gb|EEX84736.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
          Length = 306

 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 89/273 (32%), Gaps = 56/273 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G LSGLFGVGGG ++ P+L           +I   +A+ T    +  +S
Sbjct: 14  MLVLLGMGAAVGFLSGLFGVGGGFLITPLLIFY--------NIPPAIAVATGANQVIASS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
           V   + H +  T+++K+    +    + +++   + S +         ++  +  F   +
Sbjct: 66  VSGALAHFKRRTLDIKLGLFLVAGGILGSLIGIFVFSWLRDLGQLDLIVSILYVFFLGTI 125

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R      +         G   
Sbjct: 126 GGLMLVESVQALRRAKKGQGGAVRRSGQHTWIHRLPFKMRFRASTIYVSVIPVLGIGFFI 185

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G LS  +GVGGG      +++           TS      +     +++  +        
Sbjct: 186 GLLSSVMGVGGGFIMVPALIYLLHVPTNVVVGTSLFQITFVTAFTTVMQATTNQS----- 240

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 ++I    +++   ++      +    +
Sbjct: 241 ------IDIVLAFLLMVGGVIGAQYGARAGRKL 267


>gi|330941320|gb|EGH44178.1| hypothetical protein PSYPI_18006 [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 177

 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 15/115 (13%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G V G +    G GGGI    L++F             G+   I   A +  +  G 
Sbjct: 9   VGLGTVIGMVLALTGAGGGILAVPLLVF-------------GLGLSIVEAAPVGLLAVGL 55

Query: 220 GLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
                    L  G V   A   I  I +L+ PL   L++ +    L + FS+++ 
Sbjct: 56  AAGIGAVLGLRQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLL 110



 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 7/136 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++  L +    + G +  L G GGG++ VP+L     L  ++ +    +A+G + G+ A 
Sbjct: 3   EHQLLGVGLGTVIGMVLALTGAGGGILAVPLLVFGLGLSIVEAAPVGLLAVGLAAGIGAV 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +       R G +  +       +  +   +   +   +  + L   F++  L     
Sbjct: 63  LGL-------RQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACGR 115

Query: 141 MLKRDRLYCERKFPDN 156
           M  R         P  
Sbjct: 116 MFIRASRELRHGKPAP 131


>gi|327400050|ref|YP_004340889.1| hypothetical protein Arcve_0133 [Archaeoglobus veneficus SNP6]
 gi|327315558|gb|AEA46174.1| protein of unknown function DUF81 [Archaeoglobus veneficus SNP6]
          Length = 461

 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 93/288 (32%), Gaps = 56/288 (19%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +I    L G LSG  G GG  V+ P +                +A+ +++    P ++
Sbjct: 25  LFLIFLGILGGMLSGFIGSGGAFVLTPGMMSI--------GAPGPIAVASNMCHKFPKAM 76

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS--------FLNKAFAIFCL 135
           +      + G +++K+     F       V   +   + ++        +++ AF I   
Sbjct: 77  VGAWRRAKIGHLDVKLAVLMAFSAIAGVQVGIKVQEMILEALGTAGTNLYVSLAFLIVLP 136

Query: 136 LMGILMLKR-----------------------------DRLYCERKFPDNYVKYIWGMVT 166
            +  L +K                                     +    ++    G  T
Sbjct: 137 AVAALCIKDVIKAKKGGLEDTEPKLAMKLEKKFRIPPIIHFKVAGRKQSLWLTIPTGFAT 196

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           GFL+  + VGG I    ++   GA    A+ T  GV+ ++                    
Sbjct: 197 GFLAATIAVGGFIGVPSMIYIIGAPSAVASGTELGVAFVMGLTGTFTW-----------A 245

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           + LG V+     +IL  S+    +    +  + +  + +  +++M   
Sbjct: 246 YKLGAVDFRMTALILAGSLFGVQIGAVGTTYVKQYMIKLAMAVVMLIV 293



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 44/116 (37%), Gaps = 9/116 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L I   F +G L+    VG G + VP +                VA GT LGV     
Sbjct: 186 LWLTIPTGFATGFLAATIAVG-GFIGVPSMIYIIGA-------PSAVASGTELGVAFVMG 237

Query: 83  VMSFME-HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +        + G ++ ++    +        + ++  ++V +  +  A A+  L++
Sbjct: 238 LTGTFTWAYKLGAVDFRMTALILAGSLFGVQIGAVGTTYVKQYMIKLAMAVVMLIV 293


>gi|330961960|gb|EGH62220.1| hypothetical protein PMA4326_25737 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 259

 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 72/199 (36%), Gaps = 13/199 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++  + ++G +  + G GGGL+ VPVL  A              A+  +        +
Sbjct: 18  LFLVAGATVAGFVDSICG-GGGLISVPVLLLA--------GFTPAQAIAANKLQGTLGGL 68

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S   +     I   +LK       +   + +LM+  V  SF+  A  I  + M      
Sbjct: 69  ASTHYYLNKKIIEWAVLKKMTLGSLLGGTLGTLMVYFVGNSFMETALPIMLVAMAFYFAF 128

Query: 144 RDRLY---CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATS 199
             ++     +   P + +        G   G  G G G F  + L+   G ++  A A S
Sbjct: 129 SPKVSDVGGKAVMPISMLGASVIPCIGLYDGFFGPGAGTFYLMALVSLGGMAMTHAVAYS 188

Query: 200 AGVSALIAFPALLVRIYSG 218
             ++      +LL+ I  G
Sbjct: 189 RVLNLFSNAISLLIFIMLG 207


>gi|308270305|emb|CBX26917.1| hypothetical protein N47_A09460 [uncultured Desulfobacterium sp.]
          Length = 260

 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+    +G ++G  G GGG ++ P L        +   I   +A+GT L  I   ++M  
Sbjct: 85  ILIGICAGLITGCIGAGGGFIIAPAL--------MSAGIKGILAVGTDLFHIFAKAIMGS 136

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLM 117
           + HR+ G I++ +   +I    I      ++
Sbjct: 137 VLHRKLGNISVALGLIFILGSIIGATTGGVI 167


>gi|294783379|ref|ZP_06748703.1| membrane protein [Fusobacterium sp. 1_1_41FAA]
 gi|294480257|gb|EFG28034.1| membrane protein [Fusobacterium sp. 1_1_41FAA]
          Length = 256

 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 95/272 (34%), Gaps = 27/272 (9%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           + +D  V    ++ V  F++  +  + G GGGL+ +P         G       H+A+GT
Sbjct: 1   MFQDFDVMKFLILAVFCFIASVVDAISG-GGGLISLPAYFAV----GFPP----HIALGT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +      ++  S  +  +   IN++I+           V+       +D  +        
Sbjct: 52  NKLSAFLSTFASAFKFWKAKKINVEIVSKLFAFSLAGAVLGVKTAVSIDTKYFKPISFAI 111

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKY-----IWGMVTGFLSGALGVGGGIFTNLLML-F 187
            +L+ +  LK   +     +     K      +     GF  G LG G   F    ++  
Sbjct: 112 LILVFLYALKNKSMGEVNYYKGTTPKTLLLGKLMAFGLGFYDGFLGPGTAAFLMFCLIKI 171

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
           +      A+  +  ++    F +L+V               LG +N    + I  +  + 
Sbjct: 172 FKLDFSSASGNTKILNLSSNFASLVVF------------GFLGKLNWLYGIPIALVMTVG 219

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
             +  +L+ + G K++   F ++        +
Sbjct: 220 AIIGARLAILKGNKFIKPVFLVVTIVLILKMS 251


>gi|283796448|ref|ZP_06345601.1| putative membrane protein [Clostridium sp. M62/1]
 gi|291075856|gb|EFE13220.1| putative membrane protein [Clostridium sp. M62/1]
 gi|295116152|emb|CBL36999.1| Predicted permeases [butyrate-producing bacterium SM4/1]
          Length = 257

 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 68/206 (33%), Gaps = 16/206 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I  +    FL+  +  + G GGGLV +P              + +H A   +     
Sbjct: 4   LQMILFLCPIFFLTSFMDAVSG-GGGLVALPAYLF--------TGLPVHNAYACNKVGCL 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  SF+   ++G I+ K       V    +   + ++ H+    L          + +
Sbjct: 55  VGNFTSFVRFLKNGLIDGKTAIGVGVVTFFCSACGAQLVLHLPDRPLKIMILASMPAVAL 114

Query: 140 LMLKR------DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASI 192
           L+         +R    + +       + G++ GF  G LG G G    LL        +
Sbjct: 115 LIFMSREYPQVNRTEEIKGWKRIRACLLTGVIMGFYDGVLGPGSGTVVILLFTKLLKYDL 174

Query: 193 YKATATSAGVSALIAFPALLVRIYSG 218
             A+  +          A    I +G
Sbjct: 175 KTASGNAKAALLASTVAASASYILAG 200



 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 41/119 (34%), Gaps = 7/119 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   ++   + G   G+ G G G V++ + +K  +         +  A G +   +  ++
Sbjct: 137 IRACLLTGVIMGFYDGVLGPGSGTVVILLFTKLLKYD-------LKTASGNAKAALLAST 189

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           V +   +   G +   +         +   V + M       F+     +   L+ + M
Sbjct: 190 VAASASYILAGKVVWTVAVPVSVFGILGGYVGAGMAIKKGAQFIRPMMLLIAALLIVKM 248


>gi|83746679|ref|ZP_00943728.1| Permease [Ralstonia solanacearum UW551]
 gi|207742598|ref|YP_002258990.1| protein of unknown function duf81 [Ralstonia solanacearum IPO1609]
 gi|83726632|gb|EAP73761.1| Permease [Ralstonia solanacearum UW551]
 gi|206593992|emb|CAQ60919.1| protein of unknown function duf81 [Ralstonia solanacearum IPO1609]
          Length = 273

 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 81/246 (32%), Gaps = 34/246 (13%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L+  F   G   +     A+GT L   + T  +  + HR HG I   I+K      
Sbjct: 43  MTPLLTLMF---GFSPA----TAVGTDLAFASLTKGVGTIAHRSHGHIRWDIVKRLCLGS 95

Query: 108 PITTVVTSLM---ISHVDKSFL---NKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI 161
               +VT L+     ++D  ++        +  +L  I +L R R+         Y    
Sbjct: 96  LPAALVTVLVLKTAGNLDAQWMHFIRVTIGVSVILTVISLLFRHRVLDWLARNPRYRLQG 155

Query: 162 WGMVTGFLSGAL---------GVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL- 211
             +    +   +          +G G     L+L     +  A                 
Sbjct: 156 SALAVATVIVGVVLGVLVTVSSIGAGAVGATLILILYPELKSA-----------EVAGTD 204

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +        + GL    LG ++   ++ +L  SI    L  +LS  + ++      +  +
Sbjct: 205 IAYAVPLTAVAGLGHMYLGTIDWNLLVSLLVGSIPGIWLGARLSKSLPERLTRGALAATL 264

Query: 272 FTTSFV 277
             T+  
Sbjct: 265 TVTAIK 270


>gi|87123980|ref|ZP_01079830.1| hypothetical protein RS9917_10231 [Synechococcus sp. RS9917]
 gi|86168549|gb|EAQ69806.1| hypothetical protein RS9917_10231 [Synechococcus sp. RS9917]
          Length = 277

 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 7/115 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++   L G L+G+ GVGGG  +VP L            + M +A GTSL +IA  S+++
Sbjct: 141 LMLQGVLVGLLTGIAGVGGGFALVPALVLL-------AGLPMQLASGTSLVLIALNSLVA 193

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                      + ++   +    +  +V   +  H     L   F++  +   +L
Sbjct: 194 LGALGHWPAERLPLVLPLLIGGGVGGLVGQALAPHFKDRQLRIGFSVLLVSAALL 248



 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 88/248 (35%), Gaps = 30/248 (12%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
            G GG ++++P+L            +    A+  SL V+   ++ + + + R   +  + 
Sbjct: 19  LGAGGSILLLPILVT-------GAGLSTRDAVPLSLVVVTLLAIANMIPYLRRRLVAPRP 71

Query: 100 LKDWIFVLPITTVVTSLM--ISHVDKSFLNKAFAIFCLLMGILMLKRDR--------LYC 149
                    +   +   M     + +      FAI  LL   LML R +           
Sbjct: 72  ALLLGVPALMGAWIGGTMVKAGWIAEPVQLAVFAIAALLAAWLMLSRQKRTDRAHDEPAV 131

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAF 208
                      + G++ G L+G  GVGGG      ++   G  +  A+ TS     LIA 
Sbjct: 132 AAATVRAPALMLQGVLVGLLTGIAGVGGGFALVPALVLLAGLPMQLASGTSL---VLIAL 188

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            +L+     G               +  VL +L    +   +   L+     + L IGFS
Sbjct: 189 NSLVALGALGHWPAER---------LPLVLPLLIGGGVGGLVGQALAPHFKDRQLRIGFS 239

Query: 269 MIMFTTSF 276
           +++ + + 
Sbjct: 240 VLLVSAAL 247


>gi|239834356|ref|ZP_04682684.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
 gi|239822419|gb|EEQ93988.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
          Length = 306

 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 89/273 (32%), Gaps = 56/273 (20%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G LSGLFGVGGG ++ P+L           +I   +A+ T    +  +S
Sbjct: 14  MLVLLGMGAAVGFLSGLFGVGGGFLITPLLIFY--------NIPPAIAVATGANQVIASS 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLM 137
           V   + H +  T+++K+    +    + ++V   + S +         ++  +  F   +
Sbjct: 66  VSGALAHFKRRTLDIKLGLFLVAGGILGSLVGIFVFSWLRDLGQLDLIVSILYVFFLGTV 125

Query: 138 GILML-------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
           G LML                                + R      +         G   
Sbjct: 126 GGLMLVESLRALRRVKKGQGGAVRRSGQHTWIHRLPFKMRFRASTIYVSIIPVLGIGFFI 185

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G LS  +GVGGG      +++           TS      +     +++  +        
Sbjct: 186 GLLSSVMGVGGGFIMVPALIYLLHVPTNVVVGTSLFQITFVTAVTTVLQATTNQS----- 240

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 ++I    +++   ++      +    +
Sbjct: 241 ------IDIVLAFLLMVGGVIGAQYGARAGQKL 267



 Score = 43.5 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 8/103 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-T 81
           I  ++   F  G LS + GVGGG +MVP L            +  +V +GTSL  I   T
Sbjct: 175 IIPVLGIGFFIGLLSSVMGVGGGFIMVPALIYLLH-------VPTNVVVGTSLFQITFVT 227

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +V + ++   + +I++ +    +    I     +     +   
Sbjct: 228 AVTTVLQATTNQSIDIVLAFLLMVGGVIGAQYGARAGQKLRGE 270


>gi|156742681|ref|YP_001432810.1| hypothetical protein Rcas_2721 [Roseiflexus castenholzii DSM 13941]
 gi|156234009|gb|ABU58792.1| protein of unknown function DUF81 [Roseiflexus castenholzii DSM
           13941]
          Length = 287

 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 49/141 (34%), Gaps = 12/141 (8%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           +  L  D  V  +   ++   + G +S + GV GG +++P L  A+          + VA
Sbjct: 146 LPALIPDDPVWQVMTGVLFGLVIGLVSSMLGVAGGELIIPTLIFAYGA-------EIKVA 198

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINM-----KILKDWIFVLPITTVVTSLMISHVDKSF 125
              SL +  PT ++  + +               +        I  V+  L++  +  + 
Sbjct: 199 GSASLLISLPTVLIGVVRYLSQRAYQGRRDLNDTIAPMGVGSVIGAVIGGLLVGVISSAI 258

Query: 126 LNKAFAIFCLLMGILMLKRDR 146
           L     I  +     +    R
Sbjct: 259 LKIGLGIILIWSASRIFHHGR 279



 Score = 42.4 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 65/183 (35%), Gaps = 15/183 (8%)

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM-------GILMLKRDRLYCERKFPD 155
            I    IT  + + ++  +    L +   +F +L+       G L  +   L  +     
Sbjct: 98  MIAGAIITAFIGTALVGRLSNERLEQVILVFLILIGGLLIIEGFLPTQLPALIPDDPVWQ 157

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVR 214
                ++G+V G +S  LGV GG      ++F YGA I  A + S  +S       ++  
Sbjct: 158 VMTGVLFGLVIGLVSSMLGVAGGELIIPTLIFAYGAEIKVAGSASLLISLPTVLIGVVRY 217

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +                     +  +   S++   +   L  +I    L IG  +I+  +
Sbjct: 218 LSQRAYQGRRDLNDT-------IAPMGVGSVIGAVIGGLLVGVISSAILKIGLGIILIWS 270

Query: 275 SFV 277
           +  
Sbjct: 271 ASR 273


>gi|110799473|ref|YP_696178.1| hypothetical protein CPF_1742 [Clostridium perfringens ATCC 13124]
 gi|169347252|ref|ZP_02866191.1| putative membrane protein [Clostridium perfringens C str. JGS1495]
 gi|182624673|ref|ZP_02952454.1| putative membrane protein [Clostridium perfringens D str. JGS1721]
 gi|110674120|gb|ABG83107.1| putative membrane protein [Clostridium perfringens ATCC 13124]
 gi|169296648|gb|EDS78779.1| putative membrane protein [Clostridium perfringens C str. JGS1495]
 gi|177910070|gb|EDT72464.1| putative membrane protein [Clostridium perfringens D str. JGS1721]
          Length = 258

 Score = 48.9 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 101/261 (38%), Gaps = 23/261 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + +  + + LS     + G+GGG+++ PVL       G  +   + V    ++  +A  
Sbjct: 1   MVLIYFLVALLSTICGSMAGLGGGVIIKPVLDFL----GDYNIETIGVLSACTIFSMALV 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--------DKSFLNKAFAIF 133
           SV+  + ++    I++K          I  ++   +++ +             +   A+ 
Sbjct: 57  SVIKQLSYKSK--IDIKNTGLLGIGSVIGGLLGQKLLTFILKIVQGRIVSLVQSGILALL 114

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
            + + I M  +++     K  +  +  I G+  G ++  LG+GGG      +  + +   
Sbjct: 115 LIFVYIYMNNKEKFK-SYKIDNFILSTIIGIFLGLIAAFLGIGGGPINVAFLTIFFSMEA 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           K  A  + +  L +  + L+ I  G G +G         ++  +  ++   +L   +  K
Sbjct: 174 KNAARDSVLIILFSQASKLLTIAFGTGFSGY--------DLSMLPYMIFGGVLGGFIGAK 225

Query: 254 LSYMIGKKYLTIGFSMIMFTT 274
            + +   + +   F+ I    
Sbjct: 226 FNRIFSNEIILRVFNTITILI 246


>gi|239627769|ref|ZP_04670800.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517915|gb|EEQ57781.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 251

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 73/197 (37%), Gaps = 18/197 (9%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F++G +  + G GGGL+ +P    A         +  H+A+GT+    A  +V+S     
Sbjct: 12  FVAGLVDSIAG-GGGLISLPAYLIA--------GVPAHMALGTNKMSSAMGTVVSTARFA 62

Query: 91  RHGTINMKILKDW--IFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD--- 145
           R+G +  K+L          I + + + +   V    +     +   ++   +L+     
Sbjct: 63  RNGYLRGKMLMAVCSAVAALIGSALGAHLALMVPGEVIKHMMIVVLPIVAFYVLRNKDMG 122

Query: 146 ---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAG 201
              +     +     +        G   G  G G G F  L++    G     A+A +  
Sbjct: 123 ENEKTGTIPQAKVFAICIAAAFFIGGYDGFYGPGTGTFLILILTGAAGLDTRSASAQTKV 182

Query: 202 VSALIAFPALLVRIYSG 218
           ++      AL+  I +G
Sbjct: 183 INLASNIAALVTFIATG 199


>gi|237801487|ref|ZP_04589948.1| hypothetical protein POR16_21866 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331024346|gb|EGI04403.1| hypothetical protein POR16_21866 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 258

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 74/203 (36%), Gaps = 13/203 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  +  +I  + ++G +  + G GGGL+ VPVL  A              A+  +     
Sbjct: 14  VYVVLFLIAGATVAGFIDSICG-GGGLISVPVLLLA--------GFTPAEAIAANKLQGT 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              + S   +     I   +LK       +   + +LM+  V  SF+  A  I  + M  
Sbjct: 65  LGGLASTHYYLNKKIIEWAVLKKMTLGSLLGGTLGTLMVYFVGNSFMEAALPIMLVAMAF 124

Query: 140 LMLKRDRLY---CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
                 ++     +   P + +        G   G  G G G F  + L+   G ++  A
Sbjct: 125 YFAFSPQVSDVGGKAVMPISMLGASVIPCIGLYDGFFGPGAGTFYLMALVSLGGMAMTHA 184

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
            A S  ++      +LL+ I  G
Sbjct: 185 VAYSRVLNLFSNAISLLIFILLG 207


>gi|120601146|ref|YP_965546.1| hypothetical protein Dvul_0095 [Desulfovibrio vulgaris DP4]
 gi|120561375|gb|ABM27119.1| protein of unknown function DUF81 [Desulfovibrio vulgaris DP4]
          Length = 356

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 100/289 (34%), Gaps = 56/289 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + +  F+ G +SG  G GG  V+ P +            +   VA+ +++    P +
Sbjct: 19  VAFLFIVGFIGGLVSGFIGSGGAFVLTPGMMSL--------GVPGTVAVASNMCHKFPKA 70

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--------DKSFLNKAFAIFC 134
           ++  ++  ++G +++K+         +       +   V           +++ +F    
Sbjct: 71  LVGTIKRFKYGQVDLKLGLYMAISAAVGVQGGIRIQQMVLQTWGQAGSDLYVSLSFVAVL 130

Query: 135 LLMGILMLKRDRLYCERKFPDN----------------------------YVKYIWGMVT 166
           +++G  +++          P+                             +     G+ T
Sbjct: 131 VIVGGYVMQDAIRCARCHIPEGTPPLARRLQQIELPPMVTFKTSGIRISFWFTVPVGLAT 190

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G L+  + VGG +    ++   G     A+AT   V+ ++     +     G        
Sbjct: 191 GLLAATIAVGGFVGVPGMIYVLGVPGIMASATELVVAFIMGLGGSINWAMHGL------- 243

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                V+I  VLIIL  S+L   L    +  + +  + +  + IM   +
Sbjct: 244 -----VDIRLVLIILGGSLLGVQLGAIGTTYVREHMIKVVMATIMLIVA 287


>gi|18310472|ref|NP_562406.1| hypothetical protein CPE1490 [Clostridium perfringens str. 13]
 gi|168216877|ref|ZP_02642502.1| putative membrane protein [Clostridium perfringens NCTC 8239]
 gi|18145152|dbj|BAB81196.1| hypothetical protein [Clostridium perfringens str. 13]
 gi|182381096|gb|EDT78575.1| putative membrane protein [Clostridium perfringens NCTC 8239]
          Length = 258

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 101/261 (38%), Gaps = 23/261 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + +  + + LS     + G+GGG+++ PVL       G  +   + V    ++  +A  
Sbjct: 1   MVLIYFLVALLSTICGSMAGLGGGVIIKPVLDFL----GDYNIETIGVLSACTIFSMALV 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--------DKSFLNKAFAIF 133
           SV+  + ++    I++K          I  ++   +++ +             +   A+ 
Sbjct: 57  SVIKQLSYKSK--IDIKNTGLLGIGSVIGGLLGQKLLTFILKIVQGRIVSLVQSGILALL 114

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
            + + I M  +++     K  +  +  I G+  G ++  LG+GGG      +  + +   
Sbjct: 115 LIFVYIYMNNKEKFK-SYKIDNFILSTIIGIFLGLIAAFLGIGGGPINVAFLTIFFSMEA 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           K  A  + +  L +  + L+ I  G G +G         ++  +  ++   +L   +  K
Sbjct: 174 KNAARDSVLIILFSQASKLLTIAFGTGFSGY--------DLSMLPYMIFGGVLGGFIGAK 225

Query: 254 LSYMIGKKYLTIGFSMIMFTT 274
            + +   + +   F+ I    
Sbjct: 226 FNRIFSNEIILRVFNTITILI 246


>gi|21219151|ref|NP_624930.1| hypothetical protein SCO0619 [Streptomyces coelicolor A3(2)]
 gi|6562818|emb|CAB62748.1| putative membrane protein [Streptomyces coelicolor A3(2)]
          Length = 247

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 73/238 (30%), Gaps = 18/238 (7%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           G  G GG ++ VP L                 A   SL V+  TSV + + H R G +  
Sbjct: 19  GALGAGGSILTVPALVYLLGF-------TPAAATTASLVVVIVTSVTALVAHARAGAVRW 71

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY 157
           +    +     +       + S V  + L   FA    L G+ ML R             
Sbjct: 72  RAGLLFAAAGVLPAAGAGALSSRVPATVLTLLFAALAALAGLHMLGRRAPRENGAVSGAR 131

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
                  +          GG +    L+      +  A  TS  V    A  AL  R YS
Sbjct: 132 AAGAGAGLGAVTGFLGVGGGFLAVPALVAVLAVPMSAAVGTSLLVVGANALVALAARAYS 191

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
              L+              +L  L  ++L      +L+  +    L   F  ++   +
Sbjct: 192 SVHLDLT-----------LLLPFLAAAVLGAWDGRRLAAKVSAGTLRRVFGAVLLAVA 238


>gi|159115095|ref|XP_001707771.1| Hypothetical protein GL50803_4181 [Giardia lamblia ATCC 50803]
 gi|157435878|gb|EDO80097.1| hypothetical protein GL50803_4181 [Giardia lamblia ATCC 50803]
          Length = 520

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 18/146 (12%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +   +++A   +G L  + G+GGGL+  P+L       GID       A   S  +IA
Sbjct: 378 ILFYVKLVLAGLFAGILGAMLGIGGGLLKNPILI----SFGIDPER----ARTASTVMIA 429

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI----------SHVDKSFLNKA 129
            TS+ S + +   G ++ +     +  +    V    +           S +        
Sbjct: 430 FTSMSSMISYVVIGGLHFEYAWPLMLTVGAFFVSGYYLSELIIRCFKTKSFIPFLITALI 489

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPD 155
               C ++  +++    +      P 
Sbjct: 490 VVCTCFIVANMIIVFIDIAKTGHLPG 515



 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 29/60 (48%)

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             + G+  G L   LG+GGG+  N +++ +G    +A   S  + A  +  +++  +  G
Sbjct: 384 LVLAGLFAGILGAMLGIGGGLLKNPILISFGIDPERARTASTVMIAFTSMSSMISYVVIG 443


>gi|289677657|ref|ZP_06498547.1| hypothetical protein PsyrpsF_30506 [Pseudomonas syringae pv.
           syringae FF5]
          Length = 167

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 15/113 (13%)

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
            G V G +    G GGGI    L++F             G+   I   A +  +  G   
Sbjct: 11  LGTVIGMVLALTGAGGGILAVPLLVF-------------GLGLSIVEAAPVGLLAVGLAA 57

Query: 222 NGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
                  L  G V   A   I  I +L+ PL   L++ +    L + FS+++ 
Sbjct: 58  GIGAVLGLRQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLL 110



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 7/136 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++  L +    + G +  L G GGG++ VP+L     L  ++ +    +A+G + G+ A 
Sbjct: 3   EHQLLGVCLGTVIGMVLALTGAGGGILAVPLLVFGLGLSIVEAAPVGLLAVGLAAGIGAV 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +       R G +  +       +  +   +   +   +  + L   F++  L     
Sbjct: 63  LGL-------RQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACGR 115

Query: 141 MLKRDRLYCERKFPDN 156
           M  R         P  
Sbjct: 116 MFIRASRELRHGKPAP 131


>gi|17158756|ref|NP_478267.1| hypothetical protein alr7620 [Nostoc sp. PCC 7120]
 gi|17134705|dbj|BAB77263.1| alr7620 [Nostoc sp. PCC 7120]
          Length = 138

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 39/101 (38%), Gaps = 8/101 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWI 104
           + + P L   F           H A GT+L ++ P  S++    + + G +++K+     
Sbjct: 44  VFITPALVYFFGF-------SQHSAQGTTLALMVPPISLLGAWAYYQQGYVDLKVTIFVC 96

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
               +  ++ +     + + FL + F    L +   M+   
Sbjct: 97  VGFFLGALLGAKFAIGIPEVFLRRIFGTALLFIAFKMIFTK 137



 Score = 35.8 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 13/101 (12%)

Query: 179 IFTNLLMLFYGASIYKATATSAGVSA-LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
             T  L+ F+G S + A  T+  +    I+                   +  G+V++   
Sbjct: 45  FITPALVYFFGFSQHSAQGTTLALMVPPISLLGAWAY------------YQQGYVDLKVT 92

Query: 238 LIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           + +     L   L  K +  I + +L   F   +   +F  
Sbjct: 93  IFVCVGFFLGALLGAKFAIGIPEVFLRRIFGTALLFIAFKM 133


>gi|317487407|ref|ZP_07946195.1| prolipoprotein diacylglyceryl transferase [Bilophila wadsworthia
           3_1_6]
 gi|316921339|gb|EFV42637.1| prolipoprotein diacylglyceryl transferase [Bilophila wadsworthia
           3_1_6]
          Length = 252

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 77/205 (37%), Gaps = 14/205 (6%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  + L+ + +F++G +  + G GGGL+ +P L  A         +    A+GT+    
Sbjct: 1   MLLTVSLLCIVTFIAGLIDSIAG-GGGLLRLPALLIA--------GVSPQQALGTNKFTG 51

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           A  +  + +   R G I  K+    I    + +   S  I   D     K       +  
Sbjct: 52  AIGTGAAMLNFARKGLILWKLAFIGIPCALLGSAAGSKCILAFDPQTAGKILIALLPVAA 111

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVT----GFLSGALGVGGGIFTNLLMLFY-GASIY 193
           ++ L   R    +    +   Y+   +     GF  G  G G G F  +        ++ 
Sbjct: 112 MITLIPRRSKSCKDSFTSKDVYLLTPLICFSVGFYDGFFGPGAGSFFIIAFNVCLRMNLI 171

Query: 194 KATATSAGVSALIAFPALLVRIYSG 218
           +A+A +   +      +L V +Y G
Sbjct: 172 QASALTKVFNLSSNLGSLFVFLYHG 196


>gi|197121441|ref|YP_002133392.1| hypothetical protein AnaeK_1028 [Anaeromyxobacter sp. K]
 gi|196171290|gb|ACG72263.1| protein of unknown function DUF81 [Anaeromyxobacter sp. K]
          Length = 254

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 72/198 (36%), Gaps = 14/198 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   + L+G +  + G GGGL+ +P L            +  H+A+GT+ G     S  +
Sbjct: 12  LTAVALLAGVVDAIAG-GGGLLTLPALLW--------TGLPPHLALGTNKGQSVFGSFAA 62

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN----KAFAIFCLLMGILM 141
            +   R G ++ +  +    +    ++  + ++  V  + L        A   L +G+  
Sbjct: 63  LVRFSRAGMVDGRRARVTFPLGLAGSLAGAGLVLLVPPATLRPVVLALLAFAALFVGLRR 122

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSA 200
               R    R+     V     +  G   G  G G G       +   G  + +A+A + 
Sbjct: 123 GPPARPDGARREATPLVAGGIALAIGAYDGFFGPGTGTFLIVAFVALLGDGLARASAGAK 182

Query: 201 GVSALIAFPALLVRIYSG 218
            V+      A+ +    G
Sbjct: 183 VVNFASNLAAVALFSVKG 200


>gi|127513392|ref|YP_001094589.1| hypothetical protein Shew_2464 [Shewanella loihica PV-4]
 gi|126638687|gb|ABO24330.1| protein of unknown function DUF81 [Shewanella loihica PV-4]
          Length = 254

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 78/209 (37%), Gaps = 13/209 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +S +   + + L+   + L+G +  + G GGGL+ +P L  A    G+  +     A+ T
Sbjct: 1   MSLELSYELMALLFAVAALAGFIDAIAG-GGGLITIPALMWA----GLPPTA----ALAT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       S  +     R G +++  +K  I    +   + ++ +  +D S L       
Sbjct: 52  NKLQACGGSFFASFYFVRKGMVDLSKMKLAICCAFLGAALGTVAVQLIDASVLKLLLPFL 111

Query: 134 CLLMGILMLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
            L +G   L    +  E K              +  GF  G  G G G  F    +   G
Sbjct: 112 ILAIGCYFLFSKSISEEDKHQVMSPTLFGLTAALGVGFYDGFFGPGTGSFFALAFVSLAG 171

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             + KATA +  ++      +L+     G
Sbjct: 172 YGLAKATAHAKVLNFSTNIASLIFFALGG 200


>gi|145220393|ref|YP_001131102.1| hypothetical protein Cvib_1590 [Prosthecochloris vibrioformis DSM
           265]
 gi|145206557|gb|ABP37600.1| protein of unknown function DUF81 [Chlorobium phaeovibrioides DSM
           265]
          Length = 263

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 7/126 (5%)

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR------DRLYC 149
           N +I+ + +    +   + +   + +    L K  A   +++   M+             
Sbjct: 77  NWQIVINLLAGSLLGAWMGAGWATKLQSKGLYKIIATLLVVIAGFMISGHLVEDAGSPLL 136

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAF 208
           E            G   G ++  LGV GG +    L++ +G  I  A + S  VS     
Sbjct: 137 ENSLQLALSGAAAGFAIGVVAALLGVAGGELLIPTLVILFGIDIKLAGSLSLAVSLPTML 196

Query: 209 PALLVR 214
            +    
Sbjct: 197 VSFTRY 202



 Score = 38.1 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 8/108 (7%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  +        A F  G ++ L GV GG +++P L   F        I + +A   SL 
Sbjct: 137 ENSLQLALSGAAAGFAIGVVAALLGVAGGELLIPTLVILF-------GIDIKLAGSLSLA 189

Query: 77  VIAPTSVMSFMEHRRHGTIN-MKILKDWIFVLPITTVVTSLMISHVDK 123
           V  PT ++SF  + R  + + +   K ++F++   ++  + +   +  
Sbjct: 190 VSLPTMLVSFTRYSRDRSFSVLGANKPFLFIMAAGSLGGTWIGGRLLG 237


>gi|256787894|ref|ZP_05526325.1| hypothetical protein SlivT_25691 [Streptomyces lividans TK24]
 gi|289771779|ref|ZP_06531157.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289701978|gb|EFD69407.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 260

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 52/156 (33%), Gaps = 7/156 (4%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+GT+  V    +  + + + R   ++++            +   +   + +    L   
Sbjct: 50  ALGTNKAVAIVGTTGAAVTYARKAPVDVRTAVRIGLAALAGSSGGAFFAAGMSTEVLKPV 109

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYI------WGMVTGFLSGALGVGGGIFTNL 183
             +  L +   ++ R              + I       G+  GF  G +G G G F  L
Sbjct: 110 IMVVLLAVAAFVIFRPAFGTAPATGPATRRRILAAIGLAGLGIGFYDGLVGPGTGTFLVL 169

Query: 184 LML-FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            +       +  A+AT+  V+      AL    + G
Sbjct: 170 ALTALLHLDLVAASATAKIVNCCTNAGALATFAWQG 205


>gi|261346284|ref|ZP_05973928.1| conserved hypothetical protein [Providencia rustigianii DSM 4541]
 gi|282565595|gb|EFB71130.1| conserved hypothetical protein [Providencia rustigianii DSM 4541]
          Length = 260

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 86/213 (40%), Gaps = 22/213 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I   +    L G +    GVGGG++++P+L+  F L  +        A+ T+  +    
Sbjct: 1   MIVTELAIGALIGLIISTTGVGGGVIVLPILTYFFGLNALA-------AVATANFLSMLM 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK--SFLNKAFAIFCLLMGI 139
            + S   H R G I MK     + ++  +T ++SL ++ +     +  +      LL+  
Sbjct: 54  KISSSYMHFRLGNIPMKGALIVLAIMLPSTFLSSLFVTWLGSIPEYTQQVEWGINLLVAT 113

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGM-----VTGFLSGALGVGGGI--------FTNLLML 186
            ++    L+ +R F  N +K +           F +   G+  G            +L+ 
Sbjct: 114 AIIFSLYLFIQRMFFLNPLKKLAVKENQLRAMAFPAVMAGIVLGATGVGGGVVVLPMLLR 173

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           +   +I +A  TS  V+ +++  + L     G+
Sbjct: 174 YMNLNIKQAIGTSIIVTTVLSGSSALAYAQDGY 206


>gi|254425270|ref|ZP_05038988.1| conserved domain protein, putative [Synechococcus sp. PCC 7335]
 gi|196192759|gb|EDX87723.1| conserved domain protein, putative [Synechococcus sp. PCC 7335]
          Length = 230

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 12/191 (6%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           L G G  L+++P+++       +   + +        G I      S +       I+ K
Sbjct: 2   LVGGGSSLILIPLVTLLLGAASVAPVLTI--------GSIIGNVQRSVL---LWQHIDWK 50

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV 158
           +    +  +   ++V +   + +    L    AI  + M +  L   R+         + 
Sbjct: 51  LTLWQLPGVTAGSLVGAYAFTKIRAEGLQFFIAIALVYMMVHSLLSHRIQMPAISIRAWH 110

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
               G  +  +SG +G  G +     +  YG    +  AT +    L     ++     G
Sbjct: 111 FLPLGFFSAIVSGLVGSTGPLLNPAYLN-YGLEKERMIATRSAGFTLTHTIKIIAYSVLG 169

Query: 219 WGLNGLPPWSL 229
                L  + L
Sbjct: 170 VFSPALIGYGL 180


>gi|317132082|ref|YP_004091396.1| protein of unknown function DUF81 [Ethanoligenens harbinense
           YUAN-3]
 gi|315470061|gb|ADU26665.1| protein of unknown function DUF81 [Ethanoligenens harbinense
           YUAN-3]
          Length = 118

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V+VP+L    +  G+        A  TS+ VI P   +S + + ++G+ +++ L  ++ 
Sbjct: 28  TVIVPML----EKCGLPP----QRAHATSIAVIVPLCALSAVFYLKNGSFSLRDLLYYVP 79

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                    SL++  +    L + F +F L     +L R
Sbjct: 80  AGFGGAYAASLVLPRIPAKLLRRIFGVFLLYAAYRLLTR 118



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 30/99 (30%), Gaps = 12/99 (12%)

Query: 179 IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
                ++   G    +A ATS  V   +   + +  + +G        +      + A  
Sbjct: 28  TVIVPMLEKCGLPPQRAHATSIAVIVPLCALSAVFYLKNGSFSLRDLLY-----YVPAGF 82

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                + L+ P        I  K L   F + +   ++ 
Sbjct: 83  GGAYAASLVLP-------RIPAKLLRRIFGVFLLYAAYR 114


>gi|218887193|ref|YP_002436514.1| hypothetical protein DvMF_2103 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758147|gb|ACL09046.1| protein of unknown function DUF81 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 352

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 49/296 (16%), Positives = 105/296 (35%), Gaps = 56/296 (18%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            D     IC + +  F+ G +SG  G GG  V+ P +            +   VA+ +++
Sbjct: 12  IDLTASGICFLFLVGFIGGLVSGFIGSGGAFVLTPGMMSL--------GVPGTVAVASNM 63

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF--------LN 127
               P +++  ++  R+G +++K+         +   +   +   + + +        ++
Sbjct: 64  CHKFPKALVGAIKRFRYGQVDVKLGLVMAASAAVGVQIGIRIQQVILEKWGQVGSDLYVS 123

Query: 128 KAFAIFCLLMGILMLKRD-----------------RLYCERKFP-----------DNYVK 159
            +F    +L+G  +++                   RL      P             +  
Sbjct: 124 LSFVAVLVLVGGYVMRDALRCARCGGVETTAPLALRLQAIELPPMLTFRRSGIRISLWFT 183

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G  TG L+  + VGG I    ++   G     A+AT   ++ ++     +     G 
Sbjct: 184 LPVGFATGMLAATIAVGGFIGVPGMIYVMGVPGLMASATELVIAFVMGLGGSINWAMHGM 243

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                       V+I  VLIIL  S+L   L    +  + +  + +  ++IM   +
Sbjct: 244 ------------VDIRLVLIILGGSLLGVQLGAIGTTYVREHMIKMVMAVIMLIVA 287



 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 52/129 (40%), Gaps = 8/129 (6%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M+   +  +   +   +   F +G L+    VG G + VP +     + G+       +A
Sbjct: 168 MLTFRRSGIRISLWFTLPVGFATGMLAATIAVG-GFIGVPGMIYVMGVPGL-------MA 219

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
             T L +     +   +    HG ++++++   +    +   + ++  ++V +  +    
Sbjct: 220 SATELVIAFVMGLGGSINWAMHGMVDIRLVLIILGGSLLGVQLGAIGTTYVREHMIKMVM 279

Query: 131 AIFCLLMGI 139
           A+  L++ +
Sbjct: 280 AVIMLIVAV 288


>gi|15922705|ref|NP_378374.1| hypothetical protein ST2373 [Sulfolobus tokodaii str. 7]
 gi|15623495|dbj|BAB67483.1| 284aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 284

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 57/283 (20%), Positives = 105/283 (37%), Gaps = 52/283 (18%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++ +I L+ VAS ++G L  L G+GGG+V+ PVL            + +  A+G SL  
Sbjct: 1   MLLTFIALLFVASIIAGLLGSLTGLGGGVVLTPVLVLFL-------GVPIEYAVGASLIS 53

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK----SFLNKAFAIF 133
              TS  S   + + G  +M+I            +  S +   +++      L+  F   
Sbjct: 54  TIATSASSGSRYIKTGLAHMRIAIALEIATTTGAITGSFLEYIIEEKHLFKLLDIIFGGV 113

Query: 134 CLLMGILMLKRDRLY------------------------CERKFPDNYVKYIWG----MV 165
            +   I    R +                           +++   + V+Y  G     +
Sbjct: 114 LIFSVIPNFIRMKSEVPVYVNPDRFSSKLRFNGSYYDEALKKEVTYHGVRYPLGLLGMYI 173

Query: 166 TGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            G +SG LG+G G    L M L        +TATS+ +  + A  +  +           
Sbjct: 174 AGLISGLLGIGSGALKVLAMDLGMNLPFKISTATSSFMIGVTAATSSGIY---------- 223

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
             W+LG ++   V I +P   + +   ++    +  + L   F
Sbjct: 224 --WALGIIDPIIVGITIPGVFVGSIFGSRYLNKLMNRRLRQIF 264


>gi|332289004|ref|YP_004419856.1| Sulfite exporter TauE/SafE [Gallibacterium anatis UMN179]
 gi|330431900|gb|AEC16959.1| Sulfite exporter TauE/SafE [Gallibacterium anatis UMN179]
          Length = 265

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I  ++V  FLS  +S LFG+GGG++MVPVL   F        + + +   TSL ++ 
Sbjct: 3   LPIIITLVVCGFLSNLMSALFGIGGGVLMVPVLHTMF------PEMPLQMVAATSLTIVM 56

Query: 80  PTSVMS-FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            TSV++     ++   I+ K +  W   + +   +   +   V    +   F +
Sbjct: 57  GTSVINLIYFIKQKIQIDKKKMIFWSLAMIVGVQLGFYLSFDVPDFVIVTIFVV 110


>gi|255526805|ref|ZP_05393704.1| protein of unknown function DUF81 [Clostridium carboxidivorans P7]
 gi|296186429|ref|ZP_06854832.1| membrane family protein [Clostridium carboxidivorans P7]
 gi|255509484|gb|EET85825.1| protein of unknown function DUF81 [Clostridium carboxidivorans P7]
 gi|296048876|gb|EFG88307.1| membrane family protein [Clostridium carboxidivorans P7]
          Length = 255

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 79/207 (38%), Gaps = 17/207 (8%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +++YI +  +  F +G +  + G GGGL+ +P              + +H+A+GT+    
Sbjct: 1   MIEYIIVCPLV-FFAGFVDAIAG-GGGLISIPAFMI--------SGVPVHLAIGTNKLSS 50

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           +  + ++   + ++G I +K+         + + + + +   ++  +          +  
Sbjct: 51  SMGTTIATYRYAKNGYIKLKLAACSAVCALMGSSIGAAIALKINDFYFKVLMLAILPITA 110

Query: 139 ILMLKRDRLYCERKFPDN------YVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGAS 191
             +L++                   +  +   + G   G  G G G F  LL+       
Sbjct: 111 FYVLRKRNFEESEDIKTLSNAKTYLICMLIAFLVGMYDGFYGPGAGTFLLLLLTGVAHLG 170

Query: 192 IYKATATSAGVSALIAFPALLVRIYSG 218
           +  +T T+  ++      AL+  + +G
Sbjct: 171 LNLSTGTTKAINLSSNVAALITFMING 197


>gi|332199816|gb|EGJ13891.1| putative membrane protein [Streptococcus pneumoniae GA41317]
          Length = 229

 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 45/122 (36%), Gaps = 4/122 (3%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM----ISHVDKS 124
           +A  +S  V     + +     +   I  +++    F   +   +  L+    +S +   
Sbjct: 43  IAFYSSFSVFIMAIISTTKRFSQSKEIKWRLIFTVSFSSVLGGFLGHLIFQVLLSQLSVR 102

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
            ++    I   +M ++           +F       I G++ G +S  LG+GGG     L
Sbjct: 103 LVSIVQMILLFVMLLVSFVLTDFKKTYQFDKIGFYMICGLLLGLISSFLGIGGGPLNVSL 162

Query: 185 ML 186
           ++
Sbjct: 163 LM 164


>gi|189500770|ref|YP_001960240.1| hypothetical protein Cphamn1_1842 [Chlorobium phaeobacteroides BS1]
 gi|189496211|gb|ACE04759.1| protein of unknown function DUF81 [Chlorobium phaeobacteroides BS1]
          Length = 324

 Score = 48.9 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 7/130 (5%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
             D  +    + +V   + G ++G+FG+G G   VPV +             + V++ TS
Sbjct: 198 DIDWQIHRTPVGLVLFVIIGFMAGMFGLGAGWANVPVFNLVLGA-------PLKVSVATS 250

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           + V++     +   +   G +   I    I  + + T + + +++ V    +        
Sbjct: 251 VFVLSVNDTAAAWIYLHKGAVLPLIAVPSIAGMMLGTKIGAKLLTRVKTKSVRVIVITLL 310

Query: 135 LLMGILMLKR 144
           LL G   + +
Sbjct: 311 LLAGFRAILK 320



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 87/260 (33%), Gaps = 48/260 (18%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP++S  F          +    G  L V    ++ +       G  N+++      +
Sbjct: 76  LYVPIVSSLFPF-------HLDFVRGAGLMVALAGALSAGAPLLNKGLANLRLALSMALI 128

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY------------------ 148
             I+++  +L+   +    +  +     + + I+ML   +                    
Sbjct: 129 GSISSIFGALVGLALPAHIIQLSLGFTIVFIAIIMLMAKKSEFPEISAPDKLSQILHIHG 188

Query: 149 ----------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATA 197
                      + +     V  +  ++ GF++G  G+G G     +     GA +  + A
Sbjct: 189 IYYEASLNKDIDWQIHRTPVGLVLFVIIGFMAGMFGLGAGWANVPVFNLVLGAPLKVSVA 248

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS  V ++    A  + ++ G  L            + AV  I  + +L T +  KL   
Sbjct: 249 TSVFVLSVNDTAAAWIYLHKGAVLP-----------LIAVPSIAGM-MLGTKIGAKLLTR 296

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           +  K + +    ++    F 
Sbjct: 297 VKTKSVRVIVITLLLLAGFR 316


>gi|78187577|ref|YP_375620.1| hypothetical protein Plut_1723 [Chlorobium luteolum DSM 273]
 gi|78167479|gb|ABB24577.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
          Length = 116

 Score = 48.9 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 60/123 (48%), Gaps = 11/123 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL-GVIAPTSVM 84
           ++    L+G LSG+FG+GGG+++VP L   F        +    A  TSL  ++ P  ++
Sbjct: 1   MLCIGILAGVLSGMFGIGGGIIIVPALVLLF-------GMTQQTASATSLVALLLPVGIL 53

Query: 85  SFMEHRRHGTINMKILK---DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             +E+ R G I+M+ +         L       + + + +  + L +AFA+F  ++ + +
Sbjct: 54  GVLEYYREGRISMENVWLGLLLAAGLFAGAYFGAKIATQLSGTVLRRAFAVFTGIVALRL 113

Query: 142 LKR 144
             +
Sbjct: 114 WFK 116


>gi|311739351|ref|ZP_07713187.1| membrane protein [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311305649|gb|EFQ81716.1| membrane protein [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 260

 Score = 48.9 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 89/260 (34%), Gaps = 25/260 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++   +  +G +  + G GGGL+++P+L            +    A+GTS       + 
Sbjct: 13  VILFFGTAAAGWIDAVIG-GGGLILIPMLLAVL------PGLAPAAALGTSKLAAVTGTG 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + +   R   ++   +  ++ +  + + + + + S +DK  +     +  + +GI +  
Sbjct: 66  SAAVTLARKVDLDKAEMTRFLLIALVCSGLGASVASSLDKDVMRPIIIVLMVAVGIFVAF 125

Query: 144 RDRLYCERKFPDNYV-----KYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           +                     +   +  F  G  G G G+F  +     +  +   + A
Sbjct: 126 KPDFGSSDSAGTRGGWRTVVVLVLSGIISFYDGIFGPGTGMFLIMAFTSIFAQNFLTSAA 185

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  V+      AL+V I              G V     L++   +I    L  +    
Sbjct: 186 MAKVVNTATNLGALVVFIIG------------GHVWWTLGLVLGVANIAGALLGARTVLG 233

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
            G K++      ++   S  
Sbjct: 234 GGAKFIRYALLTLVVVMSCY 253


>gi|206890789|ref|YP_002248580.1| hypothetical protein THEYE_A0738 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206742727|gb|ACI21784.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 314

 Score = 48.5 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 49/118 (41%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +V     G ++G+FG+G G   VPVL+             + V++ TS  +++ T   + 
Sbjct: 198 LVLFIAIGIMAGMFGLGAGWANVPVLNLLMGA-------PLKVSVATSKFLLSITDTSAA 250

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +  +G +   ++   I  + + +VV   +++      +        L  G+  L +
Sbjct: 251 WIYLNNGAVLPMMVAPSIVGIMLGSVVGVRILAVAKPKIVRYIVIAMLLFAGLRALLK 308



 Score = 35.4 bits (81), Expect = 8.2,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 76/216 (35%), Gaps = 41/216 (18%)

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI-FCLLMGILMLKRDRLYC 149
           + G  ++++      +   + +V +++   +  + +N A      +++ I++L +   Y 
Sbjct: 101 KRGFADLRLAIPLALIASASAIVGAMIGLALPPNIVNIALGATILMIVAIMLLAKKSEYP 160

Query: 150 ERKFPDNYVK---------------------------YIWGMVTGFLSGALGVGGGIFTN 182
           E K  D   +                            +  +  G ++G  G+G G    
Sbjct: 161 EVKKADALSQALKINGIYHEISTGKEIEWKVHRTPQALVLFIAIGIMAGMFGLGAGWANV 220

Query: 183 LLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
            ++ L  GA +  + ATS  + ++    A  + + +G  L  +           +++ I+
Sbjct: 221 PVLNLLMGAPLKVSVATSKFLLSITDTSAAWIYLNNGAVLPMMVA--------PSIVGIM 272

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             S+    +  ++  +   K +      ++      
Sbjct: 273 LGSV----VGVRILAVAKPKIVRYIVIAMLLFAGLR 304


>gi|168210079|ref|ZP_02635704.1| putative membrane protein [Clostridium perfringens B str. ATCC
           3626]
 gi|170711827|gb|EDT24009.1| putative membrane protein [Clostridium perfringens B str. ATCC
           3626]
          Length = 258

 Score = 48.5 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 101/261 (38%), Gaps = 23/261 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + +  + + LS     + G+GGG+++ PVL       G  +   + V    ++  +A  
Sbjct: 1   MVLIYFLVALLSTICGSMAGLGGGVIIKPVLDFL----GDYNIETIGVLSACTIFSMALI 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--------DKSFLNKAFAIF 133
           SV+  + ++    I++K          I  ++   +++ +             +   A+ 
Sbjct: 57  SVIKQLSYKSK--IDIKNTGLLGIGSVIGGLLGQKLLTFILKIVQGRIVSLVQSGILALL 114

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
            + + I M  +++     K  +  +  I G+  G ++  LG+GGG      +  + +   
Sbjct: 115 LIFVYIYMNNKEKFK-SYKIDNFILSTIIGIFLGLIAAFLGIGGGPINVAFLTIFFSMEA 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           K  A  + +  L +  + L+ I  G G +G         ++  +  ++   +L   +  K
Sbjct: 174 KNAARDSVLIILFSQASKLLTIAFGTGFSGY--------DLSMLPYMIFGGVLGGFIGAK 225

Query: 254 LSYMIGKKYLTIGFSMIMFTT 274
            + +   + +   F+ I    
Sbjct: 226 FNRIFSNEIILRVFNTITILI 246


>gi|320353582|ref|YP_004194921.1| hypothetical protein Despr_1475 [Desulfobulbus propionicus DSM
           2032]
 gi|320122084|gb|ADW17630.1| protein of unknown function DUF81 [Desulfobulbus propionicus DSM
           2032]
          Length = 351

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/297 (16%), Positives = 102/297 (34%), Gaps = 57/297 (19%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            D  V  I  + +  F+ G +SG  G GG  V+ P +            +   VA+ +++
Sbjct: 12  IDLNVYTITFLFLVGFIGGLVSGFIGSGGAFVLTPGMMSL--------GVPGTVAVASNM 63

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--------DKSFLN 127
               P +++  ++  ++G +++K+         I      ++  ++           +++
Sbjct: 64  CHKFPKALVGAIKRYKYGQVDIKLGLIMGVFAEIGVQAGIMVQKYILDRWGQAGSNLYVS 123

Query: 128 KAFAIFCLLMG-----------------------------ILMLKRDRLYCERKFPDNYV 158
             F +  + +G                             I +     L         + 
Sbjct: 124 FIFVLVLVTVGSFVMRDAITMKRAGGTSESVPSLAKRLQRIELWPMLTLKTANLRISLWF 183

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
                + TG L+  + VGG I    LM   GA+   A+AT   ++ ++     L+  Y G
Sbjct: 184 LVPVAVATGMLAATIAVGGFIGVPGLMYIIGATSIVASATELVIAFVMGLGGTLIWAYYG 243

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                        V+I  V+IIL  S+    L    +  + +  +    + IM   +
Sbjct: 244 M------------VDIRLVMIILAGSLFGVQLGAIGTTYVKEYMIKYVMATIMLIVA 288


>gi|254505034|ref|ZP_05117185.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11]
 gi|222441105|gb|EEE47784.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11]
          Length = 309

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 8/103 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +I    + G L  + G+GGG +MVP L    +       +   + +GTSL  I  T 
Sbjct: 175 VIPVIGLGAVIGFLGTVLGIGGGFMMVPALIYLLR-------VPTSIVIGTSLFQILFTM 227

Query: 83  VMSFMEHRRH-GTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
             + + H     T+++ +    +    I     + M  ++   
Sbjct: 228 AAATIFHAMGTKTVDIVLAMTLMVGGVIGAQFGARMGQNLRGD 270


>gi|326411347|gb|ADZ68411.1| conserved hypothetical protein [Brucella melitensis M28]
          Length = 146

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 7/122 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + L +   + +G +S L G+G G++ +P +  A +L        + V+   S  +I 
Sbjct: 21  VGSLPLGLSLMYGAGLVSALLGIGSGVLKIPAMDTALRL-------PIKVSSAASNFMIG 73

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T   S   +   G IN  I         +  V  + +++ +    L   F I  +L+ I
Sbjct: 74  VTGAASAGAYFMRGDINTAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAI 133

Query: 140 LM 141
            M
Sbjct: 134 AM 135


>gi|163755485|ref|ZP_02162604.1| hypothetical protein KAOT1_04972 [Kordia algicida OT-1]
 gi|161324398|gb|EDP95728.1| hypothetical protein KAOT1_04972 [Kordia algicida OT-1]
          Length = 249

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 8/121 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA-PT 81
           +  I + +  +G L G+FG+G G++MVP+L   F+L           A   SL ++  P 
Sbjct: 135 VYWIGILAACTGILGGMFGIGAGVLMVPILIGGFKL-------KKEYARALSLAILIPPV 187

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  +F+++     I+ +++        I     + M S +        + +  L + I+ 
Sbjct: 188 SYGAFIKYNLENPIDWQLVGILFGTYFIANFFGAKMGSKISGKVFTLVYGVILLSIAIIY 247

Query: 142 L 142
           L
Sbjct: 248 L 248



 Score = 42.4 bits (99), Expect = 0.077,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 85/233 (36%), Gaps = 19/233 (8%)

Query: 51  VLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPIT 110
           ++S      G+   +     +   LG ++   VMS  E+ +        +   +    I 
Sbjct: 29  LVSFLVLYCGMSQLVAQGNILTMMLGPMSLLGVMSLYEYVKK---QWIHIVVGVICYCIF 85

Query: 111 TVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF----PDNYVKYIWGMVT 166
           +   ++   ++ ++ L   FAI  +++ +L  +       +         Y   I    T
Sbjct: 86  SYFGAVFAFYIGETDLKYYFAILLVIIALLQFRSYMKKNAKAADKAYISVYWIGILAACT 145

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G L G  G+G G+    +++  G  + K    +  +S  I  P +    +  + L     
Sbjct: 146 GILGGMFGIGAGVLMVPILIG-GFKLKK--EYARALSLAILIPPVSYGAFIKYNLENPID 202

Query: 227 WSLGFVNIGAVLIILPISILITP-LATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           W         ++ IL  +  I      K+   I  K  T+ + +I+ + + ++
Sbjct: 203 W--------QLVGILFGTYFIANFFGAKMGSKISGKVFTLVYGVILLSIAIIY 247


>gi|17547145|ref|NP_520547.1| hypothetical protein RSc2426 [Ralstonia solanacearum GMI1000]
 gi|17429447|emb|CAD16133.1| putative of unknown function duf81 transmembrane protein [Ralstonia
           solanacearum GMI1000]
          Length = 253

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 83/246 (33%), Gaps = 34/246 (13%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L+  F   G   +     A+GT L   + T  +  + HR HG +   I+K      
Sbjct: 23  MTPLLTLMF---GFSPAT----AVGTDLAFASLTKSVGTIAHRNHGHVRWDIVKLLCLGS 75

Query: 108 PITTVVTSLM---ISHVDKSFLNKA---FAIFCLLMGILMLKRDRL------YCERKFPD 155
               +VT  +     ++D  +++       +  +L  + +L R R+          +   
Sbjct: 76  VPAALVTVAVLKMAGNLDVRWMHIIRVTIGVSVILTVVSVLFRQRVLGWLARNPRYRLQG 135

Query: 156 NYVKYI---WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL- 211
           + +       G   G L     +G G     L+L     +  A                 
Sbjct: 136 SALAIATVMIGSALGVLVTVSSIGAGAVGATLILILYPELKSA-----------EVAGTD 184

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +        + GL    LG ++   +  +L  SI    L  +LS  + ++ +    +  +
Sbjct: 185 IAYAVPLTAVAGLGHMYLGTIDWNLLASLLVGSIPGIWLGARLSKNLPERLVRGALAATL 244

Query: 272 FTTSFV 277
             T+  
Sbjct: 245 TVTAIK 250


>gi|291006767|ref|ZP_06564740.1| membrane permease protein [Saccharopolyspora erythraea NRRL 2338]
          Length = 264

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 40/105 (38%), Gaps = 7/105 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP L              + +A+ TSL V+A +S+   +   R   +   +   +  
Sbjct: 28  ILAVPALVY-------GVGQPLQMAIPTSLAVVALSSLGGLLPRERRTVVRWPVALVFGA 80

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
                    + +   + + +L  AF+   +++ + ML+  +    
Sbjct: 81  AGTPAAFGGAALGRLLPQRWLLLAFSALMIVVAVRMLRGGQNQAG 125


>gi|104779324|ref|YP_605822.1| hypothetical protein PSEEN0009 [Pseudomonas entomophila L48]
 gi|95108311|emb|CAK13005.1| conserved hypothetical protein; putative membrane protein
           [Pseudomonas entomophila L48]
          Length = 272

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 40/120 (33%), Gaps = 15/120 (12%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSA-GVSALIAFPALLVRIYS 217
              G + G +    G GGGI    L++F  G S+ +A       V    A   +L     
Sbjct: 9   AGLGAIIGAVLALTGAGGGILAVPLLVFGLGLSMVEAAPIGLLAVGLAAAVGGVLG---- 64

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                       G V   A L I  I I   P    L++ +    L + F+ ++      
Sbjct: 65  ---------LRQGLVRYRAALFIAVIGIACAPFGLMLAHRLPNAPLALVFAGVLVYACLR 115



 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 49/136 (36%), Gaps = 7/136 (5%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++++  L      + G +  L G GGG++ VP+L     L  ++ +    +A+G +  V 
Sbjct: 1   MIEHQLLGAGLGAIIGAVLALTGAGGGILAVPLLVFGLGLSMVEAAPIGLLAVGLAAAVG 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
               +       R G +  +       +         ++   +  + L   FA   +   
Sbjct: 61  GVLGL-------RQGLVRYRAALFIAVIGIACAPFGLMLAHRLPNAPLALVFAGVLVYAC 113

Query: 139 ILMLKRDRLYCERKFP 154
           + + ++       + P
Sbjct: 114 LRIWRKATRELRGESP 129



 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 34/92 (36%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +    ++ M   + TSL VIA  S  S +     G ++ ++   +     +  +
Sbjct: 177 FVIIPALNRYTNLNMKSIVATSLAVIALVSTGSVVSASVAGVMHWRVGAPFAVGAVLGLL 236

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +   +   +    L + FA+      +L+  +
Sbjct: 237 LARPLAGKLAGPRLQQLFAVVGCGAAVLLAGK 268


>gi|85712128|ref|ZP_01043181.1| Predicted permease [Idiomarina baltica OS145]
 gi|85694118|gb|EAQ32063.1| Predicted permease [Idiomarina baltica OS145]
          Length = 242

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 92/254 (36%), Gaps = 28/254 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
               V  F + TL G+ G G GLV VP+L     +  I  ++            I    +
Sbjct: 4   IYAAVIIFFATTLQGISGFGSGLVSVPLLVLFLPMTTITPTL-----------SIVNVFL 52

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + ++     + +     +      ++V SL++  V++  +     +  L +  +++ 
Sbjct: 53  SAIIYYKNRHAAHPRQWLWLLGAGFAFSIVGSLLLVEVNERAIQWLLGLLILTVVAVLVS 112

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT--ATSAG 201
              L      P +      G  +G L+G + +GG     +++    A + K T  AT A 
Sbjct: 113 GRNLPTFNHRPGHVG---VGATSGILNGLMTLGG---PPIILFLANAKVDKTTFRATLAL 166

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              +IA   +L     G              ++  +L ++P ++L       L   + ++
Sbjct: 167 FFLVIAIANVLTFSTQGVYQRS---------HLTLLLAMVPCAMLGALFGHYLQRFVVEQ 217

Query: 262 YLTIGFSMIMFTTS 275
                   +M  + 
Sbjct: 218 QFKRLTLGLMLLSG 231


>gi|239908647|ref|YP_002955389.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
 gi|239798514|dbj|BAH77503.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
          Length = 323

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 97/283 (34%), Gaps = 48/283 (16%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++   F+ G ++ L GVGGG++ VP++S  F          +    G  L V    ++
Sbjct: 51  LILLFFCFILGIIAVLAGVGGGVLYVPLVSGFFPF-------HLDFVRGAGLMVALAGAL 103

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +     +    ++++      +     +V +++   +  + +  A     L + IL+LK
Sbjct: 104 AAGPGLLKRNLASLRLALPVALIASSCAIVGAMIGLALPTNVVQIALGSTILFIAILILK 163

Query: 144 RDRLYCERKFPDNYVKYIWG----------------------------MVTGFLSGALGV 175
              +        + +    G                            +V G ++G  G+
Sbjct: 164 SKNVAVPEVKNPDALGIALGMNGVYFDASSGKEYAWKTHRTLPGLLMFIVIGVMAGMFGL 223

Query: 176 GGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           G G     ++    G  +  A  TS  + ++    A  V +  G  +  +         I
Sbjct: 224 GAGWANVPVLNLMMGVPLKVAVGTSKFLLSITDTSAAWVYLNQGCVIPLMA--------I 275

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            +++ ++  S     +  +L      K++      ++  +   
Sbjct: 276 PSIVGLMFGSF----VGVRLLAKAKPKFIRYMVIGVLLFSGAK 314



 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
            + G ++G+FG+G G   VPVL+           + + VA+GTS  +++ T   +   + 
Sbjct: 212 IVIGVMAGMFGLGAGWANVPVLNLMM-------GVPLKVAVGTSKFLLSITDTSAAWVYL 264

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G +   +    I  L   + V   +++     F+        L  G   L +
Sbjct: 265 NQGCVIPLMAIPSIVGLMFGSFVGVRLLAKAKPKFIRYMVIGVLLFSGAKALLK 318


>gi|240137876|ref|YP_002962348.1| hypothetical protein MexAM1_META1p1206 [Methylobacterium extorquens
           AM1]
 gi|240007845|gb|ACS39071.1| conserved membrane hypothetical protein, DUF81 [Methylobacterium
           extorquens AM1]
          Length = 269

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 79/233 (33%), Gaps = 15/233 (6%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L+    +         HVA+GTS   ++ ++  + +   R G +  +    +     
Sbjct: 34  VPLLTYVVGVS------SPHVAIGTSALAVSVSAAGNLVPQWRAGNVKWRCAAAFSVAGV 87

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           +  +  S+    VD   L   F +  L++G LML + R   + +                
Sbjct: 88  LGALAGSVAAKAVDGQSLLALFGVVMLVVGGLMLSKRRDDGDPEVRLTKANAPV-----L 142

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS--ALIAFPALLVRIYSGWGLNGLPP 226
           L   LG+G  +         G             S    +A    LV + +         
Sbjct: 143 LPWLLGIGFAVGLFSGFFGIGGGFLIVPGLMLATSMPLPMAIGTSLVAVSAFGAATAASY 202

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIG--KKYLTIGFSMIMFTTSFV 277
            + G ++     + +   +L     T+L   +   K+ LT+ F+ ++      
Sbjct: 203 AASGLIDWPLAGLFILGGVLGGLAGTRLGQRLAGRKRALTVTFAGLVILVGLY 255


>gi|326796095|ref|YP_004313915.1| hypothetical protein Marme_2857 [Marinomonas mediterranea MMB-1]
 gi|326546859|gb|ADZ92079.1| protein of unknown function DUF81 [Marinomonas mediterranea MMB-1]
          Length = 281

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 65/180 (36%), Gaps = 14/180 (7%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             +  + + +  +G +  + G GGGL+ +P L  A         +   + +GT+      
Sbjct: 21  HVLLFLFLVAICAGVVDAIAG-GGGLITIPSLLIA--------GVPPILTLGTNRLQAVI 71

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
               +F+    H  I  K L   I    I  +  S  +S  DK  L     I  + +   
Sbjct: 72  GESTAFITFLLHNQIQAKSLITGITFTAIGALAGSYSVSLFDKDTLEILLPILMVCITTY 131

Query: 141 MLKRDRLY----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
            +   R+      + K          G++ GF +G  G G G       ++  G +I +A
Sbjct: 132 AIFSKRIKGTEATQGKTSTRSFMISCGLIIGFYNGFFGPGTGSIWMLAFVILLGFTIKQA 191


>gi|220904085|ref|YP_002479397.1| hypothetical protein Ddes_0811 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868384|gb|ACL48719.1| protein of unknown function DUF81 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 379

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G ++G+FG+G G   VPVL+             + V++GTS  +++ T   + 
Sbjct: 265 LLLFIVIGIMAGMFGLGAGWANVPVLNLLMGA-------PLKVSVGTSKFLLSITDTSAA 317

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +   G +   +    I  L + +VV   +++     F+        L  G   L +
Sbjct: 318 WVYLNQGCVIPLMAIPSIVGLMLGSVVGVRLLAVAKPKFIRYMVIFVLLFSGAKALMK 375



 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 97/283 (34%), Gaps = 48/283 (16%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++V  F+ G ++ + GVGGG++ VP++S  F          +    G  L V    ++
Sbjct: 108 IALLVFCFILGIIAVMAGVGGGVLFVPLVSGFFPF-------HLDFVRGAGLLVALAGAL 160

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK--------------- 128
            +     R    N+++      +     +V +++   +    +                 
Sbjct: 161 AAGPGLLRRNFANLRLALPVALIASACAIVGAMLGLALPTHVIQTCLGATILAIAVLLLL 220

Query: 129 -------------AFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGV 175
                        A  +   + G+ +        E K        +  +V G ++G  G+
Sbjct: 221 SKNSVRPVVTKQDAVGLALGMNGVFLEPSTGEVVEWKTHRTVAGLLLFIVIGIMAGMFGL 280

Query: 176 GGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           G G     ++ L  GA +  +  TS  + ++    A  V +  G  +  +         I
Sbjct: 281 GAGWANVPVLNLLMGAPLKVSVGTSKFLLSITDTSAAWVYLNQGCVIPLMA--------I 332

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            +++ ++  S+    +  +L  +   K++      ++  +   
Sbjct: 333 PSIVGLMLGSV----VGVRLLAVAKPKFIRYMVIFVLLFSGAK 371


>gi|223992571|ref|XP_002285969.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220977284|gb|EED95610.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 564

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 2/74 (2%)

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
           +     GF +G  GVGGGI    LML  G     ++A+SA +    +F A    +  G  
Sbjct: 429 LVCTAAGFFAGMFGVGGGIVKGPLMLAMGVHPKVSSASSACMILFTSFTATTSFVVFGLL 488

Query: 221 LNGLPP--WSLGFV 232
                    +LGFV
Sbjct: 489 DMDYATVCMTLGFV 502



 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 13/114 (11%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G  +G+FGVGGG+V  P++      MG+       V+  +S  +I  TS  +       
Sbjct: 434 AGFFAGMFGVGGGIVKGPLML----AMGVHP----KVSSASSACMILFTSFTATTSFVVF 485

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN---KAFAI--FCLLMGILM 141
           G ++M      + +  + T+V  + + ++ + F      AF+I    LL   LM
Sbjct: 486 GLLDMDYATVCMTLGFVATLVGQIGLFYLMEKFQRNSYIAFSIGGIVLLSAFLM 539


>gi|114705806|ref|ZP_01438709.1| hypothetical protein FP2506_15109 [Fulvimarina pelagi HTCC2506]
 gi|114538652|gb|EAU41773.1| hypothetical protein FP2506_15109 [Fulvimarina pelagi HTCC2506]
          Length = 260

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 74/220 (33%), Gaps = 3/220 (1%)

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
           I   +    A  +       T+  S   H  +  I+ K+    +    +  VV + +++ 
Sbjct: 38  ISFGVAPATASASVHTAELFTTAASGTAHALNRNIDWKLFWRLVPFGVLGGVVGTYVLTS 97

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRD-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
              S      A +  ++G+ ++ R  R    +  P   V  +     GFL    G G G 
Sbjct: 98  FSGSVAKPYVATYLAIIGVYLVVRSFRKIPSKPVPGRVVPPLALTG-GFLDSVGGGGWGP 156

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
                +L  G +      T      ++     L  +++    +      L   +  A+L 
Sbjct: 157 VVATGLLGAGGAPRYVIGTVNTAEFVVTLAVSLSFLFALLTGHWEEAGDL-ASHGLAILG 215

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           ++   I+  P A  +   + ++ L      ++     + A
Sbjct: 216 LIVGGIIAAPFAGFVVRRLAERILLRLVGGLITILGVIQA 255


>gi|11497962|ref|NP_069186.1| hypothetical protein AF0350 [Archaeoglobus fulgidus DSM 4304]
 gi|2650283|gb|AAB90884.1| conserved hypothetical transmembrane protein [Archaeoglobus
           fulgidus DSM 4304]
          Length = 211

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 7/51 (13%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            F+ G ++G+ G+GGG  +VP                + +A+GTSL  +  
Sbjct: 149 GFVIGIITGIVGLGGGYALVPSFIYLL-------GSAVKIAVGTSLAEVLL 192



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 148 YCERKFPDNY-VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSAL 205
               + P +   K   G V G ++G +G+GGG       +   G+++  A  TS     L
Sbjct: 133 KPGNEVPGSSTAKATIGFVIGIITGIVGLGGGYALVPSFIYLLGSAVKIAVGTSLAEVLL 192


>gi|138894579|ref|YP_001125032.1| hypothetical protein GTNG_0909 [Geobacillus thermodenitrificans
           NG80-2]
 gi|134266092|gb|ABO66287.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 247

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 84/258 (32%), Gaps = 24/258 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++  F +  +  L G GGGL+ +PVL            + +H A+ ++      +S 
Sbjct: 4   ILFVLIGFATSFVGTLAG-GGGLISMPVLLTL--------GVPIHQAISSAKFSNTISSF 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            SF    R   I  K L   I +          + S + +  +     +  L    L L 
Sbjct: 55  SSFFVLFRQQNIRGKQLLLIIPISLGGGATGGAIASLLSERTMTIIAVMLLLFALCLQLF 114

Query: 144 RDRLYCERKFPDNY-VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
           + +       P    + Y          G  G G         L  G     A A +   
Sbjct: 115 KKKPKSAATAPALPKIFYPILYGISVYDGMFGPGQATMLMYAYLRAGMDYLSAMALTRFQ 174

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
           + +  F A+   +YSG     + P+            +   S++   ++ +++  + +  
Sbjct: 175 TFISCFGAMASYLYSGLMNWHIAPF------------LAMGSLIGAQVSVRVAQKLKQNQ 222

Query: 263 LTIGF--SMIMFTTSFVF 278
           L +       +     +F
Sbjct: 223 LRLILHTITFLLIVQLLF 240


>gi|117921556|ref|YP_870748.1| hypothetical protein Shewana3_3118 [Shewanella sp. ANA-3]
 gi|117613888|gb|ABK49342.1| protein of unknown function DUF81 [Shewanella sp. ANA-3]
          Length = 300

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 95/261 (36%), Gaps = 21/261 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +         +   G GGG++ +PV S   F       +  M    G + G I   S  
Sbjct: 52  FLFLGITGAIFANATGAGGGVIFIPVFSSLNFSEAQSVSTSFMIQCFGMTAGAI---SWS 108

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVT---SLMISHVDKSFLNKAFAIFCLLMGILM 141
            +     H           I +    +++    S +      S L+ +F++F +++GI +
Sbjct: 109 GYYRRHHHQDKTWSGFIPSILLAATCSILGLWSSQLWHLNSPSSLHTSFSLFSIILGIAI 168

Query: 142 LKRDRLYCERKFPDNYV----KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
           +   +    +    N +      I G + G ++  L VG G    + ++  G     A A
Sbjct: 169 IISSQRRTLQSHRLNALDYCWLAIIGYLGGIITAWLSVGVGELLVIYLMLRGVCAKMAVA 228

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
               VSA+  + A  + +++                   VL   P +I+   LA KL+  
Sbjct: 229 IGVVVSAITVWSASPIHVFASDSHALFEL----------VLFAGPGAIIGGLLARKLALF 278

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           +  K L + FS  +  T FV 
Sbjct: 279 LPVKTLKLFFSSWIILTGFVM 299



 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 43/119 (36%), Gaps = 6/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           C + +  +L G ++    VG G ++V        L G+     M VA+G  +  I   S 
Sbjct: 188 CWLAIIGYLGGIITAWLSVGVGELLV----IYLMLRGV--CAKMAVAIGVVVSAITVWSA 241

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                         +++        I  ++   +   +    L   F+ + +L G +M+
Sbjct: 242 SPIHVFASDSHALFELVLFAGPGAIIGGLLARKLALFLPVKTLKLFFSSWIILTGFVMI 300


>gi|113869592|ref|YP_728081.1| permease [Ralstonia eutropha H16]
 gi|113528368|emb|CAJ94713.1| predicted permease [Ralstonia eutropha H16]
          Length = 253

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 86/243 (35%), Gaps = 24/243 (9%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGLV +P +  A+       ++     +GT+       +  + + + R   I       
Sbjct: 23  GGGLVQIPAMFSAY------PNVAPATLLGTNKMGSIAGTANAALRYGRSVRIYWGATAP 76

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF-----PDNY 157
            +    + ++  +  ++ +    L KA     +++ +  + +  L  E         +  
Sbjct: 77  AVVAALVFSMAGAWALTKIPAEPLRKALPFVLVVLLVYTVAKKDLGTEHAPTLSGARERI 136

Query: 158 VKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
              + G V GF  G  G G G       +  +G     A A++  V+      ALL+   
Sbjct: 137 AALLAGAVIGFYDGVFGPGTGSFLMIAFVRVFGYDFLHAAASAKVVNLATNLAALLLLA- 195

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                      S G +     L++   +I  + + +KL+   G  ++   F +++     
Sbjct: 196 -----------SKGHIWWQLGLVMAVANIAGSQVGSKLALRHGSAFVRKVFIVVVSALIL 244

Query: 277 VFA 279
             A
Sbjct: 245 KTA 247


>gi|315161020|gb|EFU05037.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
 gi|315576489|gb|EFU88680.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
          Length = 237

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 92/241 (38%), Gaps = 26/241 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILK 101
           GGG+++ PVL                +A  +S+ V    S+ S  +  ++G  I  K   
Sbjct: 2   GGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFVM-SISSTYKQYQNGVQIEWKKAA 54

Query: 102 DWIFVLPITTVVTSLMISHV-----DKSFLNKA-FAIFCLLMGILMLKRDRLYCERKFPD 155
              F   +  ++  L+++       ++  +    + I  L + +++L             
Sbjct: 55  SISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYIIMLLTLVLVLLYNQFSNWHLHLNG 114

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALL-V 213
             +  I G+  G LS  LG+GGG      L+LF+G  I  AT  S           L  +
Sbjct: 115 LSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMDIKSATVYSIITIFFSQLAKLGNI 174

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            + +G+ +            +   L I+P ++    +    S  + ++ +   +S+++F 
Sbjct: 175 GLTTGFAVFD----------LTMFLAIIPAALFGGYVGGLFSKKLSQQRVAQIYSLVVFL 224

Query: 274 T 274
            
Sbjct: 225 V 225


>gi|207721422|ref|YP_002251863.1| protein of unknown function duf81 [Ralstonia solanacearum MolK2]
 gi|206586581|emb|CAQ17168.1| protein of unknown function duf81 [Ralstonia solanacearum MolK2]
          Length = 273

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 81/246 (32%), Gaps = 34/246 (13%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L+  F   G   +     A+GT L   + T  +  + HR HG I   I+K      
Sbjct: 43  MTPLLTLMF---GFSPA----TAVGTDLAFASLTKGVGTIAHRSHGHIRWDIVKRLCLGS 95

Query: 108 PITTVVTSLM---ISHVDKSFL---NKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI 161
               +VT L+     ++D  ++        +  +L  I +L R R+         Y    
Sbjct: 96  LPAALVTVLVLKTAGNLDAQWMHFIRVTIGVSVILTVISLLFRHRVLGWLARNPRYRLQG 155

Query: 162 WGMVTGFLSGAL---------GVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL- 211
             +    +   +          +G G     L+L     +  A                 
Sbjct: 156 SALAVATVIVGVVLGVLVTVSSIGAGAVGATLILILYPELKSA-----------EVAGTD 204

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +        + GL    LG ++   ++ +L  SI    L  +LS  + ++      +  +
Sbjct: 205 IAYAVPLTAVAGLGHMYLGTIDWNLLVSLLVGSIPGIWLGARLSKSLPERLTRGALAATL 264

Query: 272 FTTSFV 277
             T+  
Sbjct: 265 TVTAIK 270


>gi|158521364|ref|YP_001529234.1| hypothetical protein Dole_1353 [Desulfococcus oleovorans Hxd3]
 gi|158510190|gb|ABW67157.1| protein of unknown function DUF81 [Desulfococcus oleovorans Hxd3]
          Length = 427

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 97/299 (32%), Gaps = 70/299 (23%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
                I+    +G ++G  G GGG ++ P L        +   I   +A+GT L  I   
Sbjct: 80  IFIASILIGLCAGLITGCIGAGGGFIIAPAL--------MSAGIKGILAVGTDLFHIFAK 131

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL-------MISHVDKSFLNKAFAIFC 134
           ++M  + HR+ G I++ +   ++        +          +   +  +F+   + +  
Sbjct: 132 AIMGSVLHRKLGNISVVLAVTFLIGSIGGATLGGWINRVLYEINPIISDAFITTIYVVML 191

Query: 135 LLMGILML-------------------------------------------KRDRLYCER 151
             +G+  L                                               L    
Sbjct: 192 GALGLYALTDFLKARKATGGGGDFHGGKDEGVDMGNLPKKLQGMNMAPMVTFDQGLVPGG 251

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
           +    +   + G   G  +  +GVGGG  T  + ++             GVS++      
Sbjct: 252 RRISAWFLILSGFFVGLAAAIMGVGGGFLTFPIFVYI-----------LGVSSMTTVGTD 300

Query: 212 LVRIYSGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           + +I    G   +  +++ GF+     + +L  S++   +    + ++    +   ++M
Sbjct: 301 IFQIVFTAGYAAIGQYAIFGFIFYTLAMGMLLGSLVGIQIGAMTTKVVKGVTIRGFYAM 359



 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 41/128 (32%), Gaps = 8/128 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +I++ F  G  + + GVGGG +  P+             +     +GT +  I  T+ 
Sbjct: 257 WFLILSGFFVGLAAAIMGVGGGFLTFPIFVYIL-------GVSSMTTVGTDIFQIVFTAG 309

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            + +      G I   +    +    +   + ++    V    +   +A+  L   +   
Sbjct: 310 YAAIGQYAIFGFIFYTLAMGMLLGSLVGIQIGAMTTKVVKGVTIRGFYAMAVLAGFVNRF 369

Query: 143 KRDRLYCE 150
                   
Sbjct: 370 FALPAKLS 377


>gi|89891000|ref|ZP_01202508.1| hypothetical transmembrane protein [Flavobacteria bacterium BBFL7]
 gi|89516644|gb|EAS19303.1| hypothetical transmembrane protein [Flavobacteria bacterium BBFL7]
          Length = 245

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 93/255 (36%), Gaps = 24/255 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y+ + ++ + L+  L  + G G  +  VPV +  F    +             +  +   
Sbjct: 5   YLPVFLILALLAEVLGTVGGFGSSVFFVPVANFYFDFQSVLG-----------ITALFHL 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S            ++ ++L        I   + + +  +++ S L     +F +++ ++ 
Sbjct: 54  SSNVTKIAFFRKGLDKRLLFYLGIPAIIFVSIGAFLSKYINPSMLGLILGVFLIVLSLMF 113

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L    L  +    +       G+++G  +G LG GG     + M  +        ATSA 
Sbjct: 114 LIFKNLVVKDSNKNAIT---GGVLSGLSAGLLGTGG-AIRGITMAAFKMDKATFIATSAA 169

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           +   +     ++  Y+G+           + ++  V ++L ++IL T +  ++     ++
Sbjct: 170 IDFGVDASRAVIYYYNGYMH---------YDHLYIVGLLLIVAILGTWIGKRILAYFSQE 220

Query: 262 YLTIGFSMIMFTTSF 276
                  +++     
Sbjct: 221 QFRTLVLVLILIIGI 235


>gi|299065978|emb|CBJ37159.1| conserved membrane protein of unknown function, DUF81 [Ralstonia
           solanacearum CMR15]
          Length = 257

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 79/246 (32%), Gaps = 34/246 (13%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L+  F             A+GT L   + T  +  + HR HG +   I+K      
Sbjct: 27  MTPLLTLMFGF-------SPATAVGTDLAFASLTKSVGTIAHRNHGHVRWDIVKLLCLGS 79

Query: 108 PITTVVTSLM---ISHVDKSFLNKA---FAIFCLLMGILMLKRDRL------YCERKFPD 155
               +VT  +     ++D  ++        +  +L  I +L R R+          +   
Sbjct: 80  VPAALVTVAVLKMAGNLDVRWMYIIRVTIGVSVILTVISVLFRQRVLGWLARNPRFRLQG 139

Query: 156 NYVKYI---WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL- 211
             +       G   G L     +G G     L+L     +  A                 
Sbjct: 140 TALAIATVMIGSALGVLVTVSSIGAGAVGATLILILYPELKSA-----------EVAGTD 188

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +        + GL    LG ++   +  +L  SI    L  +LS  + ++ +    +  +
Sbjct: 189 IAYAVPLTAVAGLGHMYLGTIDWNLLASLLVGSIPGIWLGARLSKNLPERLVRGALAATL 248

Query: 272 FTTSFV 277
             T+  
Sbjct: 249 TVTAIK 254


>gi|260062894|ref|YP_003195974.1| putative transmembrane protein [Robiginitalea biformata HTCC2501]
 gi|88784462|gb|EAR15632.1| possible transmembrane protein [Robiginitalea biformata HTCC2501]
          Length = 258

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 69/200 (34%), Gaps = 13/200 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +++A F    L    G GGG         A   +G+ +   +      +L       
Sbjct: 5   LIWLVLAFFTIALLYASAGFGGG-----SSYLAILSLGLAEFYEIRT---IALLCNLTVV 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL--MISHVDKSFLNKAFAIFCLLMGIL 140
             S     + G ++  +   +         + +   +   V    L  A  I  L +G  
Sbjct: 57  SGSVWLFYKRGHLDWNLCIPFTLASIPLAYMGASFRLEEQVFFGILGAALLISSLALGYQ 116

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG--ASIYKATAT 198
            ++      ++      + Y+ G   G LSG +G+GGGIF   ++        I  A A 
Sbjct: 117 SVRHRFRIPKKHRYTRSLTYLLGGAIGMLSGLVGIGGGIFLAPVLNHLKWDLPIKIA-AL 175

Query: 199 SAGVSALIAFPALLVRIYSG 218
           ++    + +   L   + +G
Sbjct: 176 ASFFILVNSLSGLAGLVTAG 195


>gi|206891144|ref|YP_002248953.1| hypothetical protein THEYE_A1129 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206743082|gb|ACI22139.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 129

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 8/118 (6%)

Query: 12  VFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
            F  ++  V+ + + I  +FL    S +FG GGG  MVP       LM +   + M+V +
Sbjct: 4   EFWGQEFKVN-LAIGIPGAFLIAIASSMFGFGGGPFMVP-------LMAVGLRLPMYVIV 55

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           G+SL  I   ++M    H   G  ++           +   +   +   ++   + + 
Sbjct: 56  GSSLLAIFFNTLMGTFRHYGFGNFDLIFFLIMFPAAILGGYIGPKIAKKLNPVMVKRV 113


>gi|46581700|ref|YP_012508.1| hypothetical protein DVU3299 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46451123|gb|AAS97768.1| membrane protein, putative [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311235336|gb|ADP88190.1| protein of unknown function DUF81 [Desulfovibrio vulgaris RCH1]
          Length = 356

 Score = 48.5 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 100/289 (34%), Gaps = 56/289 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + +  F+ G +SG  G GG  V+ P +            +   VA+ +++    P +
Sbjct: 19  VAFLFIVGFIGGLVSGFIGSGGAFVLTPGMMSL--------GVPGTVAVASNMCHKFPKA 70

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--------DKSFLNKAFAIFC 134
           ++  ++  ++G +++K+         +       +   V           +++ +F    
Sbjct: 71  LVGTIKRFKYGQVDLKLGLYMAISAAVGVQGGIRIQQMVLQTWGQAGSDLYVSLSFVAVL 130

Query: 135 LLMGILMLKRDRLYCERKFPDN----------------------------YVKYIWGMVT 166
           +++G  +++          P+                             +     G+ T
Sbjct: 131 VIVGGYVMQDAIRCARCHIPEGTPPLARRLQQIELPPMVTFKTSGIRISFWFTVPVGLAT 190

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G L+  + VGG +    ++   G     A+AT   V+ ++     +     G        
Sbjct: 191 GLLAATIAVGGFVGVPGMIYVLGVPGIMASATELVVAFIMGLGGSINWAMHGL------- 243

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                V+I  VLIIL  S+L   L    +  + +  + +  + IM   +
Sbjct: 244 -----VDIRLVLIILGGSLLGVQLGAIGTTYVREHMIKVVMATIMLIVA 287


>gi|283853689|ref|ZP_06370920.1| protein of unknown function DUF81 [Desulfovibrio sp. FW1012B]
 gi|283570930|gb|EFC18959.1| protein of unknown function DUF81 [Desulfovibrio sp. FW1012B]
          Length = 346

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/290 (17%), Positives = 100/290 (34%), Gaps = 56/290 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  + +  F+ G +SG  G GG  V+ P +            +   VA+ +++    P +
Sbjct: 18  IVFLFLVGFIGGLVSGFIGSGGAFVLTPGMMSL--------GVPGPVAVASNMCHKFPKA 69

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF----------LNKAF-- 130
           ++  ++  R+G +++K+         I       +   + + +          L+  F  
Sbjct: 70  LVGSIKRYRYGQVDIKLGVIMGLFAEIGVQAGIHVQQIILEKWGEAGSNLYVSLSFVFVL 129

Query: 131 ---AIFCLLMGILMLKRDRLYCERKFPDN---------------------YVKYIWGMVT 166
                F +   + + K D      K                         +      + T
Sbjct: 130 LTVGSFVMRDALRLAKNDGQGKPNKLAQRLQAIELWPMMTFKRAGVRISVWFLIPVALAT 189

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G L+  + VGG I    LM   G +   A+AT   ++ ++     L+  Y G        
Sbjct: 190 GMLAATIAVGGFIGVPGLMYIIGVTSIVASATELVIAFVMGLGGTLIWAYYGM------- 242

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                V+I   LIIL  S+    L    +  + +  + +  ++IM   +F
Sbjct: 243 -----VDIRLTLIILGGSLFGVQLGAIGTTYVKEYMIKMVMAIIMLIVAF 287


>gi|114330399|ref|YP_746621.1| hypothetical protein Neut_0377 [Nitrosomonas eutropha C91]
 gi|114307413|gb|ABI58656.1| protein of unknown function DUF81 [Nitrosomonas eutropha C91]
          Length = 352

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 7/169 (4%)

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           SL +    S  S +   R   +N +I   +I       ++ + +I  ++  +L    A F
Sbjct: 46  SLTLGTFASAASRIVVFRK-HVNTRIFLWFIPFAIPAVLLGAWLIKFINPLYLQFGVAFF 104

Query: 134 CLLMGILMLKRDRLYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
            L     + +  +   + + P  NY+  + G + GF+SG +G  G +  N   L YG S 
Sbjct: 105 LLFNIPQLFQSGQELQKGEKPYPNYILALVGFLCGFVSGVIGAVG-LLFNRFYLRYGLSK 163

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
            +  AT A     +    L+V   +   L      SLG   + A+  I+
Sbjct: 164 EEIIATRAANEVYLHVIKLVVY--TSLDLYSEAALSLGL--LIALAAIV 208


>gi|315079516|gb|EFT51509.1| integral membrane family protein [Propionibacterium acnes HL053PA2]
          Length = 241

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 86/237 (36%), Gaps = 21/237 (8%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           L+M+P L     L+G+     +   +GT+       ++ + + + R    + ++      
Sbjct: 14  LIMLPSL-----LVGLPTETPVATIVGTNKVAQVVGNLTAGVGYLRKQRPDWRMFLWTAV 68

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD---NYVKYIW 162
           +  +  V+ + +++++ ++       +  +++GI   +R  L             +  I 
Sbjct: 69  LAGLGAVLGARIVTYMSRAVYTPILLVVLVIIGIYTWRRPSLGAGHNGEGGKHPILVPII 128

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
           G+  G   GA+G G G F  L  +   G S  KA+  +   +A+     +          
Sbjct: 129 GLFLGCYDGAIGPGVGTFWVLTYVAVGGYSFLKASGMAKICNAVTNLVTITTLAIH---- 184

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                   G V       ++  ++L   +  + +   G  ++   F ++    +   
Sbjct: 185 --------GHVWWHIAWPLVISNVLGGLIGARTAMKHGNGFVRTMFLIVTSVLAVRM 233


>gi|227512659|ref|ZP_03942708.1| possible membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227084124|gb|EEI19436.1| possible membrane protein [Lactobacillus buchneri ATCC 11577]
          Length = 252

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 77/203 (37%), Gaps = 17/203 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++    FL+G +  + G GGGL+ +P              + +H A+GT+    A  +
Sbjct: 4   FIIVCPLVFLAGFVDAIAG-GGGLISLPAYLM--------TGMPVHFAIGTNKLSSAMGT 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V++ ++  R G + + +    +    + ++  S +  HV   +     AI   +  I +L
Sbjct: 55  VVATLKFARSGYLRLGLSIFTVIAAILGSLTGSQLALHVSDFYFRIILAIVLPVTAIYLL 114

Query: 143 KRDR-------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYK 194
              +       +          +      + G   G  G G G F  LL+       I  
Sbjct: 115 TNKKALGAAGFVQTGISNRQMVIATAISFMIGGYDGFYGPGTGTFLILLLTGLDHLPINV 174

Query: 195 ATATSAGVSALIAFPALLVRIYS 217
           A  T+  ++      AL+V +++
Sbjct: 175 AAGTTKVINLTTNITALIVFLFN 197


>gi|149917337|ref|ZP_01905836.1| hypothetical protein PPSIR1_40680 [Plesiocystis pacifica SIR-1]
 gi|149821944|gb|EDM81338.1| hypothetical protein PPSIR1_40680 [Plesiocystis pacifica SIR-1]
          Length = 245

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 91/252 (36%), Gaps = 25/252 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++V    + TLSG+ G+GGG+ ++ V++       +          G    V   T +
Sbjct: 10  AALLVTGLCAATLSGVLGMGGGVTLLGVMTAILPAPVVVPLH------GVVQLVSNFTRM 63

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +  + H     +  KI+  +   L +     + + S    S+L     +  LL+  L+++
Sbjct: 64  LGLIRH-----VTWKIVAVFAPPLLLGVGGATALWSGDKLSYLRPVVGV--LLIAFLIVR 116

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
           R         P  +   + G+V GF S  +G  G        L          AT A   
Sbjct: 117 RKAPSLRE--PPLWTYALLGLVAGFASVWIGAVG-PLLAPFFLRDDFESKDVIATKAACI 173

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           +L     +   +  G+   G             +L ++ + I+ T +   +   + + + 
Sbjct: 174 SLTHVLKIPAFLVLGFDFLGY---------GPLLLGLIAVVIVGTLIGRAILERVDRDWF 224

Query: 264 TIGFSMIMFTTS 275
              F +++   +
Sbjct: 225 ERAFEVLLGLLA 236


>gi|89891539|ref|ZP_01203044.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
 gi|89516313|gb|EAS18975.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
          Length = 127

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 39/106 (36%), Gaps = 9/106 (8%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI-APTSVMSFMEHRRHGT-INMKILKDW 103
           ++MVP+                H A G SL V+  P + ++   + ++G  ++ +     
Sbjct: 29  VIMVPLAIWFL-------GYSQHQAQGLSLAVLAVPVTFLAAYTYHKNGHELDWRYALVI 81

Query: 104 IFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
                      + +   +++  L K F +  +++ + M+       
Sbjct: 82  AVAFVFGGYFGTKLAISINQQLLKKIFGVILIIVAVKMIFFSSAKA 127


>gi|58040165|ref|YP_192129.1| hypothetical protein GOX1734 [Gluconobacter oxydans 621H]
 gi|58002579|gb|AAW61473.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H]
          Length = 255

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 53/273 (19%), Positives = 93/273 (34%), Gaps = 33/273 (12%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  L  ++  L G L G+ GVGGG +M P+L   F        +    A+GT L   A
Sbjct: 1   MPHSWLYTLSGLLVGFLVGMTGVGGGSLMTPLLILLF-------GVKPQSAVGTDLLYAA 53

Query: 80  PTSVMSFMEHRRHGTINMKI-LKDWIFVLPITTVVTSLMISHVDKSFLNKAF----AIFC 134
            T +     +R HG +  +I L      LP   +    +       F++K       +  
Sbjct: 54  ITKIFGTALNRHHGVVRWRIVLLQMAGSLPAGLLCLIFLRHFGPSPFVSKLITEVLGVAL 113

Query: 135 LLMGILMLKRD---RLYCERKFPDNYV------KYIWGMVTGFLSGALGVGGGIFTNLLM 185
           LL    +L +    +       P   +           + T     ++G G      L +
Sbjct: 114 LLTVPAILFKPWLQKWSIGAGTPRPQIVDVLTVVLGVVLGTLVTLSSVGAGAIGMAALTV 173

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           L+   S  +  AT    +  +A             L G   W  G V+   ++ +L  SI
Sbjct: 174 LYPRVSTRELVATDIAHAVPLAL------------LAGGGHWLQGAVDTVVLVELLMGSI 221

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               L T L+  + +        +++       
Sbjct: 222 PGILLGTLLAGRLREDAQRWFLGILLAIIGLRM 254



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 39/101 (38%), Gaps = 6/101 (5%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           VG G + +  L+  +        +     + T +    P ++++   H   G ++  +L 
Sbjct: 161 VGAGAIGMAALTVLY------PRVSTRELVATDIAHAVPLALLAGGGHWLQGAVDTVVLV 214

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +       ++ +L+   + +        I   ++G+ M+
Sbjct: 215 ELLMGSIPGILLGTLLAGRLREDAQRWFLGILLAIIGLRMI 255


>gi|258406558|ref|YP_003199300.1| hypothetical protein Dret_2440 [Desulfohalobium retbaense DSM 5692]
 gi|257798785|gb|ACV69722.1| protein of unknown function DUF81 [Desulfohalobium retbaense DSM
           5692]
          Length = 567

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 38/99 (38%), Gaps = 12/99 (12%)

Query: 173 LGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF 231
            G+GGG     +M   G   +Y A       +   +  + +  + +G+    LP + +  
Sbjct: 465 FGIGGGFLLVPIMTMVGALPMYVAVPVGLVGTCFSSIGSFIGYLMNGY----LPDFWI-- 518

Query: 232 VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
                 L I+    +   + +++  +  +K L    +++
Sbjct: 519 -----ALAIIIGGFVGGTIGSRMQKLFTEKQLKWILAVV 552



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 8/95 (8%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI-NMK 98
           FG+GGG ++VP+++          ++ M+VA+   L     +S+ SF+ +  +G + +  
Sbjct: 465 FGIGGGFLLVPIMTMV-------GALPMYVAVPVGLVGTCFSSIGSFIGYLMNGYLPDFW 517

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           I    I    +   + S M     +  L    A+ 
Sbjct: 518 IALAIIIGGFVGGTIGSRMQKLFTEKQLKWILAVV 552



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 47/131 (35%), Gaps = 2/131 (1%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             II+ + L G    L G  GG++M          MG       +V   +++ +   + +
Sbjct: 265 LWIILGAILVGAFFSLIGAAGGMLMAAYQVMVVNTMGPVGINAANVLRPSNVALTLFSPL 324

Query: 84  MSFMEHR-RHGTINMKILKDWIFVLPITTV-VTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            SF  +  +   +   +   +   + I ++ +   +   +  +   +  A+  +LMG   
Sbjct: 325 GSFYRYAIKERRVAWPVGLSFGVGILIGSIWLGKYVTEFLPLASYKEWLAVLVVLMGART 384

Query: 142 LKRDRLYCERK 152
           L         K
Sbjct: 385 LYELTPKVMEK 395


>gi|94500642|ref|ZP_01307172.1| hypothetical protein RED65_04105 [Oceanobacter sp. RED65]
 gi|94427197|gb|EAT12177.1| hypothetical protein RED65_04105 [Oceanobacter sp. RED65]
          Length = 250

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 81/261 (31%), Gaps = 27/261 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++   + ++   S   G G GL+ +P+L            +   +A+ T         +
Sbjct: 5   IILFFIAIVANIFSAFAGGGAGLIQLPILIFL--------GLPFAIALATHKVATVALGL 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + + + G  + +     +       V+ +  I  +D            L + I  + 
Sbjct: 57  GATIRNIKEGHTSWRFNLIMLAAGIPGVVLGAYAIIGIDDRLAEILLGALTLSLSIYSIV 116

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLS-----GALGVGGGIFTNLLML-FYGASIYKATA 197
           +  L    +  +     +     G  +     GAL  G G+F  + ++ ++G +   A  
Sbjct: 117 KPNLGLVPEHRNQTGWGLLIGCIGLFAIGFTNGALSAGTGLFATMWLVKWFGLNYKHAVG 176

Query: 198 -TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T   V     F   L                L  +    +  ++  S +   +    + 
Sbjct: 177 HTLISVGLFWNFSGALTM------------GLLAQIQWDWLPALVLGSSIGGYIGAHYAI 224

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            +G  ++   + ++       
Sbjct: 225 KMGSSWIKRVYEVVTLVVGIK 245


>gi|289207369|ref|YP_003459435.1| hypothetical protein TK90_0183 [Thioalkalivibrio sp. K90mix]
 gi|288943000|gb|ADC70699.1| protein of unknown function DUF81 [Thioalkalivibrio sp. K90mix]
          Length = 253

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 77/214 (35%), Gaps = 17/214 (7%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           VA+ T           + + H +  T     L   +       ++ + ++  +       
Sbjct: 44  VALATHKIATVALGAGASLRHLKQSTFEPARLAVILAAGLPGVLIGAWLVLGIPPRAGEI 103

Query: 129 AFAIFCLLMGILMLKRDRL-----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
           A  +  + +G    +R +L       ++      +  +   + G L+G+L  G G+   L
Sbjct: 104 ALGLLTIALGWYSWRRPQLGQAVRETDKTLHHAVIGALGLFIIGILNGSLASGTGLMVTL 163

Query: 184 LML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            ++ +YG S  +A   +  +         +  +++G G   L   + G V    +  +L 
Sbjct: 164 WLVRWYGMSYTQAVGYTMVL---------VGLVWNGAGALLL--GTFGTVQWDWLPALLV 212

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            S +   L   L++  G + +   F ++   T  
Sbjct: 213 GSFIGGYLGAALAHRYGNRLVKRTFEVVTVLTGI 246


>gi|209516417|ref|ZP_03265273.1| protein of unknown function DUF81 [Burkholderia sp. H160]
 gi|209503179|gb|EEA03179.1| protein of unknown function DUF81 [Burkholderia sp. H160]
          Length = 268

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 58/275 (21%), Positives = 102/275 (37%), Gaps = 40/275 (14%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   L G + GL G GGG++ VP L        +     M  A   +L  +A ++ +  
Sbjct: 5   LILGILVGAVLGLTGAGGGILAVPALV-------VGMGWPMQQASPVALIAVAGSAAIGA 57

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL---------- 136
           +E  R G +  +            T + + +   + +  L   FA   LL          
Sbjct: 58  IEAFRSGLVRYRAALLMTIAGAPVTALGAQLAHKLPQRLLVALFAGLMLLVALRLLTQAI 117

Query: 137 --------MGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
                   M  L + R      R    +         G +TG ++G LGVGGG     ++
Sbjct: 118 GQKTSEETMSPLCVGRMDPRTGRLSWTWTSGAALAGTGALTGLMTGLLGVGGGFVIVPML 177

Query: 186 L-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
                 S++   ATS  V AL+    ++  I +G     LPP +L        ++    +
Sbjct: 178 RKLTNVSMHGIVATSLMVVALVGSSGVISTIRAGV----LPPLTL-------TVLFSVAT 226

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            L   +    S  +  +++ IGF+ ++   S   A
Sbjct: 227 ALGMVVGRGASRHLSARHVQIGFAGVLVCVSLGMA 261


>gi|328952839|ref|YP_004370173.1| protein of unknown function DUF81 [Desulfobacca acetoxidans DSM
           11109]
 gi|328453163|gb|AEB08992.1| protein of unknown function DUF81 [Desulfobacca acetoxidans DSM
           11109]
          Length = 385

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 47/115 (40%), Gaps = 9/115 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++  F    LS   GVGGG + VP L+          ++ M+V  GTS   +  + + S 
Sbjct: 263 VLGGFFIAALSAFIGVGGGFLYVPFLTSV-------TALPMYVVAGTSALAVFISMITSI 315

Query: 87  MEHR--RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                 +   I+   +   +  +   ++V      ++   +L + F I  + +G+
Sbjct: 316 FTFMFVKGTPIDFLFIGAELIGIATGSIVGPYTSKYIPDIWLKRLFVILAIYVGL 370



 Score = 40.8 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 40/124 (32%), Gaps = 13/124 (10%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLV 213
           +     + G     LS  +GVGGG      +       +Y    TSA    +    ++  
Sbjct: 258 NPVWPVLGGFFIAALSAFIGVGGGFLYVPFLTSVTALPMYVVAGTSALAVFISMITSIFT 317

Query: 214 RIYSGWGLNGLPPWSLGFVNIGA-VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
            ++              F+ IGA ++ I   SI    +    S  I   +L   F ++  
Sbjct: 318 FMFVKGTPID-------FLFIGAELIGIATGSI----VGPYTSKYIPDIWLKRLFVILAI 366

Query: 273 TTSF 276
               
Sbjct: 367 YVGL 370


>gi|291286203|ref|YP_003503019.1| hypothetical protein Dacet_0261 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290883363|gb|ADD67063.1| protein of unknown function DUF81 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 240

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 74/202 (36%), Gaps = 14/202 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + L      LS   S L G GG ++ VPV    F +  I   + +             +
Sbjct: 1   MLLLPFALGALSWFFSTLAGGGGAMIFVPVAGMFFSIQTIAPVVAV---------AGLLS 51

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            +   + +RR   I + +L   I  +    V  + + S V+   +    A+F LL G+  
Sbjct: 52  GLSRIILYRRSINIRVSLL--VIPGVITGAVSGAYLFSFVNPILIAYCLAVFYLLNGVWA 109

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L        +    N+   I G ++ F+SG +GVGG    N   L YG        T A 
Sbjct: 110 LFFREKKLFKV--KNWYFPIAGAISSFISGIVGVGG-PLMNPFYLNYGMQKEMLLGTKAA 166

Query: 202 VSALIAFPALLVRIYSGWGLNG 223
           V  ++           G   +G
Sbjct: 167 VVIVMQLFKAGTYTTVGMMDSG 188


>gi|238061692|ref|ZP_04606401.1| hypothetical protein MCAG_02658 [Micromonospora sp. ATCC 39149]
 gi|237883503|gb|EEP72331.1| hypothetical protein MCAG_02658 [Micromonospora sp. ATCC 39149]
          Length = 280

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I A    G ++GLFGVGGG +++P L            + M  A+ TSL +I   S   F
Sbjct: 162 IAAGIGVGFMTGLFGVGGGFLIIPALVLLL-------GLSMPAAVATSLVIIVVNSAAGF 214

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             H     I+ +I   +       ++    +   +    L +AFA     +   
Sbjct: 215 AAHAGDAAIDYRIAAAFTLAATTGSLAAGRLAVRLPTQRLQRAFAWLVFAIAAF 268



 Score = 42.4 bits (99), Expect = 0.074,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 72/233 (30%), Gaps = 22/233 (9%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
             +     + +  A+ TSL V+  +S  + +   R G +  +I               + 
Sbjct: 50  PALVYGAGLTLAAAVPTSLLVVGISSATALLPRLRAGLVQWRIAAIVGGTGAAAAFAGAA 109

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
               +D   +   FA   +L G  ML                    G +   ++  +GVG
Sbjct: 110 ANRLLDPRLVLIGFAALMVLAGWRMLGSTDDSGGDCALPGGGINWRGCLPKSIAAGIGVG 169

Query: 177 ----------GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
                     G +    L+L  G S+  A ATS  +  + +                   
Sbjct: 170 FMTGLFGVGGGFLIIPALVLLLGLSMPAAVATSLVIIVVNSAAGF---------AAHAGD 220

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            ++ +    A  +      L      +L+  +  + L   F+ ++F  +   A
Sbjct: 221 AAIDYRIAAAFTLAATTGSLAA---GRLAVRLPTQRLQRAFAWLVFAIAAFVA 270


>gi|167627507|ref|YP_001678007.1| hypothetical protein Fphi_1281 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597508|gb|ABZ87506.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 253

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 109/265 (41%), Gaps = 27/265 (10%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMHV 69
           MV    +        I+   FL+  +  + G GGGL+ +P LS     ++ +  +  +  
Sbjct: 1   MVEFFSEHFYFLCIFIVAMGFLASFIDAIAG-GGGLISIPALSMTGLPIVAVLGTNKLQA 59

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           ++GT++ V         +++ + G IN+K +   +    +   + +++   +   F+N  
Sbjct: 60  SIGTAMAV---------LKYYKSGLINIKTVLRGLIAGFVGACLGTILTLVIHNDFMNTL 110

Query: 130 FAIFCLLMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
             I  +++ I  +    L     +++  +     I+G + G   G  G G G F  + ++
Sbjct: 111 VPILLIVIFIFSILNKNLGVNEGKKRMSEMTFFTIFGFILGAYDGFFGPGTGNFWIITIV 170

Query: 187 FY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           ++ G +  +A+  +  ++      +L V   SG             VNI   L++   S 
Sbjct: 171 YFLGYTFLQASGYAKVLNLKSNLFSLGVFALSGQ------------VNIAFGLLMAVGSF 218

Query: 246 LITPLATKLSYMIGKKYLTIGFSMI 270
               + +++  + G K +   F ++
Sbjct: 219 FGGIVGSRMVILKGSKLVRPIFIVV 243


>gi|73537426|ref|YP_297793.1| hypothetical protein Reut_B3591 [Ralstonia eutropha JMP134]
 gi|72120763|gb|AAZ62949.1| Protein of unknown function DUF81 [Ralstonia eutropha JMP134]
          Length = 273

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 85/280 (30%), Gaps = 43/280 (15%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D +        + G +  L G GG ++ VP+L    +L   + +    +A+G S  V A 
Sbjct: 3   DIVATSAALGAVVGLILALTGAGGAILAVPLLLFVLRLSVAEAAPVALLAVGLSAAVGAM 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +       R G +  +          + + +       +    L   FA    L+   
Sbjct: 63  LGL-------RAGVVRYRAALLMAVSGTLFSPIGLWFAHRLPNGPLTLLFAAVLALVAWR 115

Query: 141 MLKRDRLYCERK------------FPDNYVKYIWGMVTGFLSGALGVGG----------- 177
           M ++       +              +   +++W  +        G G            
Sbjct: 116 MFRQAAGSKVPQAAEAARSMQPCRLDNQTGRFVWTALCTRALALSGAGAGFLSGLLGVGG 175

Query: 178 -GIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
             +    L     A ++   ATS  V  L++   ++    +G        W +G      
Sbjct: 176 GFVIVPALKKATNAPLHTIVATSLAVITLVSASGVITTAIAG-----RMDWQVG------ 224

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            +     ++L       L+  +    L  GF+++    + 
Sbjct: 225 -VPFAAGAMLAMLGGRLLASRLSGARLQQGFAVVAGLIAI 263



 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 36/90 (40%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
               +    +  +H  + TSL VI   S    +     G ++ ++   +     +  +  
Sbjct: 179 IVPALKKATNAPLHTIVATSLAVITLVSASGVITTAIAGRMDWQVGVPFAAGAMLAMLGG 238

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            L+ S +  + L + FA+   L+ I M+ +
Sbjct: 239 RLLASRLSGARLQQGFAVVAGLIAIGMVAK 268



 Score = 43.1 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 13/123 (10%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL-IAFPALLVRI 215
                 G V G +    G GG I    L+LF    +  + A +A V+ L +   A +  +
Sbjct: 6   ATSAALGAVVGLILALTGAGGAILAVPLLLFV---LRLSVAEAAPVALLAVGLSAAVGAM 62

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                         G V   A L++     L +P+    ++ +    LT+ F+ ++   +
Sbjct: 63  LG---------LRAGVVRYRAALLMAVSGTLFSPIGLWFAHRLPNGPLTLLFAAVLALVA 113

Query: 276 FVF 278
           +  
Sbjct: 114 WRM 116


>gi|298484687|ref|ZP_07002790.1| membrane protein, putative [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298160827|gb|EFI01845.1| membrane protein, putative [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 270

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 15/121 (12%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G + G +    G GGGI    L++F             G+   I   A +  +  G 
Sbjct: 9   VGLGAIIGVVLALTGAGGGILAVPLLVF-------------GLGLSIVEAAPVGLLAVGL 55

Query: 220 --GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             G+  L     G V   A   I  I +L+ PL   L++ +    L + FS+++      
Sbjct: 56  AAGIGALLGLRQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACTR 115

Query: 278 F 278
            
Sbjct: 116 M 116



 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 48/136 (35%), Gaps = 7/136 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++  L +    + G +  L G GGG++ VP+L     L  ++ +    +A+G +      
Sbjct: 3   EHQLLGVGLGAIIGVVLALTGAGGGILAVPLLVFGLGLSIVEAAPVGLLAVGLA------ 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            + +  +   R G +  +       +  +   +   +   +  + L   F++  L     
Sbjct: 57  -AGIGALLGLRQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACTR 115

Query: 141 MLKRDRLYCERKFPDN 156
           M  R         P  
Sbjct: 116 MFIRASRELRHGQPPP 131



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 7/101 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V++P L++          + M   + TSL VIA  S  S +     G ++  +   +  
Sbjct: 177 FVIIPALTRY-------SDLGMKSVVATSLAVIALVSTGSVITASLSGVMHWTVGAPFAL 229

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
              I  +V   +  ++    L + FA+  ++   ++    R
Sbjct: 230 GAVIGLIVGRQVARYLAGPRLQQLFAVCGIVAAFMLALSVR 270


>gi|259508171|ref|ZP_05751071.1| permease [Corynebacterium efficiens YS-314]
 gi|259164260|gb|EEW48814.1| permease [Corynebacterium efficiens YS-314]
          Length = 275

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 92/232 (39%), Gaps = 17/232 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++I  + ++G +  + G GGGLV++P++            +    A+  +       + 
Sbjct: 26  AVLIAGAAVAGWIDAVIG-GGGLVLIPLILAVM------PQLAPVTALAVNKVAAVTGTA 78

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + +   R     +K+L  ++ V  + + + +L  S +DK  +     +  L++G+ +  
Sbjct: 79  SAAVTMVRRVRPPLKLLAIYVPVALVCSGLGALAASSLDKQVMRPLIIVLMLVVGVFVAF 138

Query: 144 RDRLYC--ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           R        R  P  +  ++     G ++G  G+ G      L++ + A + +   TSA 
Sbjct: 139 RPSFGTGESRDLPTGWRLWMAIGAVGLIAGYDGIFGPGTGMFLIMAFTALLSQNFLTSAA 198

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           ++ ++     +  +            + G V     L++   +++   L  +
Sbjct: 199 MAKVVNTSTNVGALIV--------FITGGHVWWQLALVLAVANVVGAQLGAR 242


>gi|124003893|ref|ZP_01688741.1| membrane protein, putative [Microscilla marina ATCC 23134]
 gi|123990948|gb|EAY30415.1| membrane protein, putative [Microscilla marina ATCC 23134]
          Length = 266

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 91/270 (33%), Gaps = 37/270 (13%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L    + L G   GLFG GG ++ VP+L   F+       I   +A   SL V+   ++ 
Sbjct: 7   LGFFLAVLVGFTMGLFGGGGSILTVPILVYLFK-------ITPSLATAYSLFVVGIAALN 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVT-SLMISHVDKSF-------------LNKAF 130
             + + R   +++K    +      T  +    ++  + +               L   F
Sbjct: 60  GVISYARRKLVSIKAAVAFGVPSLFTVFLARGFILPSLPQILLHTSYFTLTKEMGLMIFF 119

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNY---VKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
           +I  LL  + M+K  +          +      +     G + G +G GGG      ++F
Sbjct: 120 SIVMLLASVSMIKGRKAPTTADTEKPWNYPRIILQSSFVGLIIGVVGAGGGFLFVPALMF 179

Query: 188 Y-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           + G ++ +A  TS  +    +       +              GF+++     +    I 
Sbjct: 180 FTGLNVKEAIGTSLFIITFNSLIGFTGDLMG-------QSIEWGFLSL--FSGLAIGGIY 230

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              L   +S  +    L + F   +     
Sbjct: 231 ---LGIYISQFVSPAKLKVSFGWFVLLMGM 257



 Score = 42.0 bits (98), Expect = 0.084,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 7/100 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            + VP L            + +  A+GTSL +I   S++ F       +I    L  +  
Sbjct: 171 FLFVPALMFF-------TGLNVKEAIGTSLFIITFNSLIGFTGDLMGQSIEWGFLSLFSG 223

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           +      +   +   V  + L  +F  F LLMG+ +L ++
Sbjct: 224 LAIGGIYLGIYISQFVSPAKLKVSFGWFVLLMGMFILLKE 263


>gi|262277629|ref|ZP_06055422.1| membrane protein [alpha proteobacterium HIMB114]
 gi|262224732|gb|EEY75191.1| membrane protein [alpha proteobacterium HIMB114]
          Length = 351

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 89/267 (33%), Gaps = 55/267 (20%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L       GI        A+      I   SV   + H     I++K+    +   
Sbjct: 40  MTPILIFL----GIPPVY----AVANGANNILAASVSGSLAHYFKNHIDVKMGVLILVGG 91

Query: 108 PITTVVTSLMISHVDKS-----FLNKAFAIFCLLMGILML-------------------- 142
            I +++   +     K       ++ ++ I    +G++M                     
Sbjct: 92  LIGSIIGVEIFIFFLKKGTINSLISVSYFILLSSIGLMMFYESLSEMRRIRNNKFIKRRM 151

Query: 143 ----------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGAS 191
                      + R++  + +        +G++ G +S  LGVGGG     ++++  G  
Sbjct: 152 HQHYWIHNLPFKVRIHASKLYISAIGPIFFGVLIGLISSLLGVGGGFILVPILIYIIGMP 211

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
                 TS      +     L+   + +            ++I  V I+   S++   L 
Sbjct: 212 AKLVPGTSLFAMIFVMIIVTLLHAIANYT-----------IDIYLVFILALGSVVGAQLG 260

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           + +S  +  + L    S+++ T  F F
Sbjct: 261 SIISSKLAGEELRGLLSILILTFGFKF 287


>gi|325193669|emb|CCA27930.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 591

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 46/120 (38%), Gaps = 17/120 (14%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM--- 87
            ++G  +GL G+GGG+V  P++         +  +   V + T+  +I  TS  + +   
Sbjct: 453 VIAGITAGLLGIGGGMVKGPIML--------EMGVLPMVQVATANFMILFTSASTTLQFA 504

Query: 88  -EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-----LNKAFAIFCLLMGILM 141
              +  G++    +  +     +       +++ + K +     L    A+   +    M
Sbjct: 505 IAGQFPGSLQYDYVGWFACAGFVGAYCGQSVVAFLLKKYNRESMLVYILAVMIGVSAFCM 564



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 5/76 (6%)

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           ++ G  +G LG+GGG+    +ML  G       AT+  +    +    L    +G     
Sbjct: 453 VIAGITAGLLGIGGGMVKGPIMLEMGVLPMVQVATANFMILFTSASTTLQFAIAGQF--- 509

Query: 224 LPPWSLGFVNIGAVLI 239
             P SL +  +G    
Sbjct: 510 --PGSLQYDYVGWFAC 523


>gi|312904848|ref|ZP_07763988.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
 gi|310631854|gb|EFQ15137.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
          Length = 237

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 92/241 (38%), Gaps = 26/241 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILK 101
           GGG+++ PVL                +A  +S+ V    S+ S  +  ++G  I  K   
Sbjct: 2   GGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFVM-SISSTYKQYQNGIQIEWKKAA 54

Query: 102 DWIFVLPITTVVTSLMISHV-----DKSFLNKA-FAIFCLLMGILMLKRDRLYCERKFPD 155
              F   +  ++  L+++       ++  +    + I  L + +++L             
Sbjct: 55  SISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYIIMLLTLVLVLLYNQFSNWHLHLNG 114

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALL-V 213
             +  I G+  G LS  LG+GGG      L+LF+G  I  AT  S           L  +
Sbjct: 115 LSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMDIKSATVYSIITIFFSQLAKLGNI 174

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            + +G+ +            +   L I+P ++    +    S  + ++ +   +S+++F 
Sbjct: 175 GLTTGFAVFD----------LTMFLAIIPAALFGGYVGGLFSKKLSQQRVAQIYSLVVFL 224

Query: 274 T 274
            
Sbjct: 225 V 225


>gi|319957573|ref|YP_004168836.1| hypothetical protein Nitsa_1842 [Nitratifractor salsuginis DSM
           16511]
 gi|319419977|gb|ADV47087.1| protein of unknown function DUF81 [Nitratifractor salsuginis DSM
           16511]
          Length = 245

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 50/137 (36%), Gaps = 8/137 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +  +F+   L  + G G G+ ++P+L            +  +VA    L   A T++
Sbjct: 6   LLYVFLAFVLSILFSMGGAGSGIALIPILHFL--------GVDFNVAKAVGLFAGASTTI 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + R   +++  L      + +   + +     VD+ F+   F +  L    +M+ 
Sbjct: 58  TSSVMNFRRKALDIAQLWPMALGMLLFAPLGAWFNRFVDQEFVKALFVLLLLYSATMMMF 117

Query: 144 RDRLYCERKFPDNYVKY 160
             +           +  
Sbjct: 118 GRKKALTHLHSKPLLLA 134


>gi|319949553|ref|ZP_08023600.1| putative permease [Dietzia cinnamea P4]
 gi|319436771|gb|EFV91844.1| putative permease [Dietzia cinnamea P4]
          Length = 273

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 95/262 (36%), Gaps = 22/262 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  +++A+F++G +  + G GGGL+ +P L      +G+         +GT+       +
Sbjct: 21  LAALVLAAFIAGWVDSVVG-GGGLIQLPALV-----IGLPADTSTPEILGTNKLSSVAGT 74

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +M+   + R   + + ++   +      +   S +   + K  L     +  + +G    
Sbjct: 75  LMATATYLRRIRVPVAMVAPLVVAAFAGSAAGSSVARFIPKELLTPLVLVAVVAVGAYTW 134

Query: 143 KRDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            +  L    +     +   +   + G+V GF  G LG G G F  + ++ +         
Sbjct: 135 FKPSLGRVHEERHSGWSRAWRSALIGVVVGFYDGILGPGTGSFFVIAIVAF--------- 185

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
              G   L    A  +   +    + L     G V       +   ++    L  +++  
Sbjct: 186 --LGFGFLQGTVAAKIANLTTNLASILVFGVHGEVLWILGGCMALANLTGGFLGARMAMN 243

Query: 258 IGKKYLTIGFSMIMFTTSFVFA 279
            G +++   F  ++   +   A
Sbjct: 244 RGNEFIRTVFLAVIAILAVRLA 265


>gi|149185869|ref|ZP_01864184.1| hypothetical protein ED21_24086 [Erythrobacter sp. SD-21]
 gi|148830430|gb|EDL48866.1| hypothetical protein ED21_24086 [Erythrobacter sp. SD-21]
          Length = 259

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 96/255 (37%), Gaps = 24/255 (9%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            ++   +G + GL G GG ++ VP++     +         H A+GTS   +A  ++   
Sbjct: 12  ALSGGATGFVLGLIGGGGSILAVPLMVYVVGVANP------HTAIGTSALAVAANALAGL 65

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           + H R GT+       +     +  +  S +  + D   L   FA+  L++G+LML+   
Sbjct: 66  VNHARAGTVKWPCGMTFAAAGMLGALAGSTLGKNFDGQKLLFLFALLMLVVGVLMLRGKG 125

Query: 147 LYCERKF----PDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAG 201
              +        +       G+ TG +SG  G+GGG      L+      +  A  TS  
Sbjct: 126 RLADEDVQLGRDNAPKLLASGLGTGAVSGFFGIGGGFLIVPGLLGATRMPMINAVGTSLV 185

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI-GK 260
                          S            G+V+     + +   ++ + L T+ +  +   
Sbjct: 186 AVTAFGITTAGNYALS------------GYVDWALAGVFVAGGVIGSLLGTRFARRLSST 233

Query: 261 KYLTIGFSMIMFTTS 275
             LT  F+ ++F  +
Sbjct: 234 GALTNIFAGVIFLVA 248



 Score = 43.9 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 8/118 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++ +   +G +SG FG+GGG ++VP L  A         + M  A+GTSL  +    + +
Sbjct: 142 LLASGLGTGAVSGFFGIGGGFLIVPGLLGA-------TRMPMINAVGTSLVAVTAFGITT 194

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS-FLNKAFAIFCLLMGILML 142
              +   G ++  +   ++    I +++ +     +  +  L   FA    L+   ML
Sbjct: 195 AGNYALSGYVDWALAGVFVAGGVIGSLLGTRFARRLSSTGALTNIFAGVIFLVAGYML 252


>gi|319764100|ref|YP_004128037.1| hypothetical protein Alide_3431 [Alicycliphilus denitrificans BC]
 gi|330823625|ref|YP_004386928.1| hypothetical protein Alide2_1004 [Alicycliphilus denitrificans
           K601]
 gi|317118661|gb|ADV01150.1| protein of unknown function DUF81 [Alicycliphilus denitrificans BC]
 gi|329308997|gb|AEB83412.1| protein of unknown function DUF81 [Alicycliphilus denitrificans
           K601]
          Length = 245

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/257 (11%), Positives = 82/257 (31%), Gaps = 22/257 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ +        L   + G+ G G  LV+VP+L+  + L  +   + +     + L    
Sbjct: 1   MNELLYPAAVVLLGYVVLGITGFGSALVIVPLLAWRWPLAEVVPLVLLLDVPASLL---- 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                  +       +N   L+  +  + +  +    + + +   +   A  ++   +G 
Sbjct: 57  -------LGGLNLRHVNFAELRRLLPGMVVGALAGLWLSTQLASRWPLLALGLYVAAVGA 109

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L+       R+       +  G   G +    G  G     L++ +    +    A  
Sbjct: 110 QALRTAAPR--RRQLAAPWSHAAGGAIGLVEILFGTAG----PLVVAWLSRRLPDVLALR 163

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A  S  +   A    +    G+ G    +  ++    ++ +    +++       +  + 
Sbjct: 164 A--STPVVITASACSVLLTMGVAGRLSHADLWLRWLVLIAVAAAGVVM---GHHWARRVP 218

Query: 260 KKYLTIGFSMIMFTTSF 276
            + L      ++  +  
Sbjct: 219 PELLRKLICALLVVSGL 235


>gi|126698372|ref|YP_001087269.1| hypothetical protein CD0792 [Clostridium difficile 630]
 gi|254974414|ref|ZP_05270886.1| hypothetical protein CdifQC_03828 [Clostridium difficile QCD-66c26]
 gi|255091805|ref|ZP_05321283.1| hypothetical protein CdifC_03970 [Clostridium difficile CIP 107932]
 gi|255099907|ref|ZP_05328884.1| hypothetical protein CdifQCD-6_03825 [Clostridium difficile
           QCD-63q42]
 gi|255313540|ref|ZP_05355123.1| hypothetical protein CdifQCD-7_04293 [Clostridium difficile
           QCD-76w55]
 gi|255516225|ref|ZP_05383901.1| hypothetical protein CdifQCD-_03872 [Clostridium difficile
           QCD-97b34]
 gi|255649322|ref|ZP_05396224.1| hypothetical protein CdifQCD_03927 [Clostridium difficile
           QCD-37x79]
 gi|260682492|ref|YP_003213777.1| hypothetical protein CD196_0742 [Clostridium difficile CD196]
 gi|260686091|ref|YP_003217224.1| hypothetical protein CDR20291_0723 [Clostridium difficile R20291]
 gi|115249809|emb|CAJ67626.1| putative membrane protein, DUF81 family [Clostridium difficile]
 gi|260208655|emb|CBA61416.1| putative membrane protein [Clostridium difficile CD196]
 gi|260212107|emb|CBE02723.1| putative membrane protein [Clostridium difficile R20291]
          Length = 125

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            +++P L            I   +A   +L    P ++++   H ++  +  K++     
Sbjct: 22  TILIPALVLL-------AGIDTKIAQSVNLLSSIPMTLIALAIHIKNKNVIFKLVIPIAV 74

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
              +  V  SL+ +++    L K F IF LL+G+  +K+       K P
Sbjct: 75  FGVLGAVFGSLLANYLSSDILKKIFGIFLLLVGLFEVKKGFCAKSDKKP 123


>gi|323697588|ref|ZP_08109500.1| protein of unknown function DUF81 [Desulfovibrio sp. ND132]
 gi|323457520|gb|EGB13385.1| protein of unknown function DUF81 [Desulfovibrio desulfuricans
           ND132]
          Length = 425

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 101/299 (33%), Gaps = 68/299 (22%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    + I     +G ++G  G GGG ++ P L        +   I   +A+GT L  I 
Sbjct: 78  LGIFMVSIAIGVGAGLITGCIGAGGGFIIAPAL--------MSAGIKGILAVGTDLFHIF 129

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL-------MISHVDKSFLNKAFAI 132
             ++M  + HR+ G +++ +   ++    +      +       +   +  +F+   +++
Sbjct: 130 AKAIMGSVIHRKLGNVSVSLAVVFLIGAILGATAGGVINRVLYEINPILSDAFITTVYSL 189

Query: 133 FCLLMGILML-----------------------------------------KRDRLYCER 151
               +G   L                                             L    
Sbjct: 190 MLGFLGFYALTDFLRSRKADKGGDAHGGAEGAEIGALCRNLQDVKCPPMIKFDQDLVAGG 249

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
           +        + G + G  +G +GVGGG  T  + ++             GVS++      
Sbjct: 250 RQISWIFLVMSGALVGLAAGIMGVGGGFLTFPIFVYV-----------LGVSSMTTVGTD 298

Query: 212 LVRIYSGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           + +I    G   +  +++ GF+     + +L  S+L   +   ++ ++    +   ++M
Sbjct: 299 IFQIVFTAGFASITQYAIYGFIFYTLAMGMLIGSLLGIQIGALVTKIVPGITIRGFYAM 357



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 56/171 (32%), Gaps = 10/171 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS- 82
             ++++  L G  +G+ GVGGG +  P+             +     +GT +  I  T+ 
Sbjct: 255 IFLVMSGALVGLAAGIMGVGGGFLTFPIFVYVL-------GVSSMTTVGTDIFQIVFTAG 307

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF--AIFCLLMGIL 140
             S  ++  +G I   +    +    +   + +L+   V    +   +  A+    M  +
Sbjct: 308 FASITQYAIYGFIFYTLAMGMLIGSLLGIQIGALVTKIVPGITIRGFYAMAVLAGFMNRI 367

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
                +L        +          G  +  + +GG     +       S
Sbjct: 368 FALPSKLAEMDIISLSPGMGSILNTIGIWAFFIVIGGFSVWVVGTFLMNIS 418


>gi|325475179|gb|EGC78364.1| hypothetical protein HMPREF9353_00378 [Treponema denticola F0402]
          Length = 151

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 9/146 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +  +    FL+G +    G GGGL+ +P              +  H A+G +    A
Sbjct: 5   LQAMIFLCFCVFLAGFVDSAAG-GGGLISIPAYFFV--------GLPAHTAIGCNKFSAA 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  S     ++G +  +I         I++ +   +   +D+ FL KA  +    + +
Sbjct: 56  CGTTFSAFRFFKNGALEWRIALVSALFSFISSYLGMKIALGIDQVFLKKAMILILPAIAV 115

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMV 165
           ++L +     E K  +   K  +   
Sbjct: 116 ILLLKRNFGNENKSKEIPQKKGFCFG 141


>gi|326778592|ref|ZP_08237857.1| protein of unknown function DUF81 [Streptomyces cf. griseus
           XylebKG-1]
 gi|326658925|gb|EGE43771.1| protein of unknown function DUF81 [Streptomyces cf. griseus
           XylebKG-1]
          Length = 247

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 73/230 (31%), Gaps = 18/230 (7%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L+     +G+  +     A+  SL ++A TS+ +   H R G +  +    +     
Sbjct: 30  VPALTYL---IGMSPAE----AITASLIIVALTSITALTGHARDGNVAWRTGLLFAAAGI 82

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           +  ++      H+ ++ L  AFA    L  + ML+                     +   
Sbjct: 83  VPAMLVGTAAGHLPQAGLTLAFAAVAALAALRMLRPAPAPATGGIRPARAGAAGAGLGAV 142

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
                  GG +    L       + +A  TS  V  + +  AL  R  +G  L+      
Sbjct: 143 TGLLGVGGGFLAVPALTRVLNLPVRRAIGTSLLVITVNSLAALGARAGTGTPLD------ 196

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                   +      ++L      + +  +    L   F+  +   +   
Sbjct: 197 -----WSVIAPFTAAAVLGAWDGKRYAQRLSGDTLRRLFAYALLAVAAFM 241



 Score = 40.8 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 8/97 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT-INMKILKDWIFVL 107
           VP L++         ++ +  A+GTSL VI   S+ +       GT ++  ++  +    
Sbjct: 155 VPALTRVL-------NLPVRRAIGTSLLVITVNSLAALGARAGTGTPLDWSVIAPFTAAA 207

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +           +    L + FA   L +   ML  
Sbjct: 208 VLGAWDGKRYAQRLSGDTLRRLFAYALLAVAAFMLAD 244


>gi|182437956|ref|YP_001825675.1| hypothetical protein SGR_4163 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178466472|dbj|BAG20992.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 247

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 73/230 (31%), Gaps = 18/230 (7%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L+     +G+  +     A+  SL ++A TS+ +   H R G +  +    +     
Sbjct: 30  VPALTYL---IGMSPAE----AITASLIIVALTSITALTGHARDGNVAWRTGLLFAAAGI 82

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
           +  ++      H+ ++ L  AFA    L  + ML+                     +   
Sbjct: 83  VPAMLVGTAAGHLPQAGLTLAFAAVAALAALRMLRPAPAPATGGTRPARAGAAGAGLGAV 142

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
                  GG +    L       + +A  TS  V  + +  AL  R  +G  L+      
Sbjct: 143 TGLLGVGGGFLAVPALTRVLNLPVRRAIGTSLLVITVNSLAALGARAGTGTPLD------ 196

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                   +      ++L      + +  +    L   F+  +   +   
Sbjct: 197 -----WSVIAPFTAAAVLGAWDGKRYAQRLSGDTLRRLFAYALLAVAAFM 241



 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 8/97 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT-INMKILKDWIFVL 107
           VP L++         ++ +  A+GTSL VI   S+ +       GT ++  ++  +    
Sbjct: 155 VPALTRVL-------NLPVRRAIGTSLLVITVNSLAALGARAGTGTPLDWSVIAPFTAAA 207

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +           +    L + FA   L +   ML  
Sbjct: 208 VLGAWDGKRYAQRLSGDTLRRLFAYALLAVAAFMLAD 244


>gi|332638414|ref|ZP_08417277.1| hypothetical protein WcibK1_06931 [Weissella cibaria KACC 11862]
          Length = 259

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 70/186 (37%), Gaps = 21/186 (11%)

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKA----------FAIFCLLMGILMLKRDRLYCER 151
             +  + + +++   + + +    L               +F  L+ +++  R     +R
Sbjct: 72  PMLLEISVGSLLGGYIGNSLLTVLLRYFPENKVQLTQSIILFLTLIFLIIYTRAMPQRQR 131

Query: 152 -KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFP 209
            K P     +  G+  G +S  L +GGG     L++   G ++  A   S          
Sbjct: 132 VKKPHWLASFGLGLFLGAISIFLAIGGGPLNVSLLVICFGFTLRDAAIYSIASIFF---- 187

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           + + +IY+    N    + LG V   A++ I+   I      T LS  +  K L I +++
Sbjct: 188 SQISKIYTIVIANDYSRYDLGLVPWLAIVAIIGGYI-----GTTLSQRLSSKMLAILYNV 242

Query: 270 IMFTTS 275
            M   +
Sbjct: 243 FMIMLA 248



 Score = 37.7 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 41/116 (35%), Gaps = 10/116 (8%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME- 88
               G +S    +GGG + V +L   F     D +I        S+  I  + +      
Sbjct: 144 GLFLGAISIFLAIGGGPLNVSLLVICFGFTLRDAAIY-------SIASIFFSQISKIYTI 196

Query: 89  --HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                +   ++ ++     V  I   + + +   +    L   + +F +++ +L L
Sbjct: 197 VIANDYSRYDLGLVPWLAIVAIIGGYIGTTLSQRLSSKMLAILYNVFMIMLAVLTL 252


>gi|240140601|ref|YP_002965081.1| hypothetical protein MexAM1_META1p4152 [Methylobacterium extorquens
           AM1]
 gi|240010578|gb|ACS41804.1| Conserved hypothetical protein; putative integral membrane protein
           [Methylobacterium extorquens AM1]
          Length = 263

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 81/239 (33%), Gaps = 24/239 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +P L     L G+D       A+ T+    +  SV + +   R G I  +    
Sbjct: 27  GGGLMTLPALL----LAGLDPVS----AIATNKLQGSAGSVSATIAFARRGLIRWREAGP 78

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK---FPDNYVK 159
             F   + +V  +L +S + +  L+    +  + + +      R+  E            
Sbjct: 79  AAFGAGLASVGGALCVSLLPRPVLDALVPLMLVGIALYFATARRMSNEDAAARITPGLFA 138

Query: 160 YIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
                  GF  G  G G G F     +   G  + +ATA +   +A     +L +     
Sbjct: 139 VTLAPAVGFYDGVFGPGAGSFYMIGFVTLLGLGVVRATAHTKLSNAASNLGSLALFTLQ- 197

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                      G V     L +   + L   + + L+  +G + +     +I    +  
Sbjct: 198 -----------GAVIWPVGLAMAVGAFLGAQVGSALAVRLGARLIRPLLVVIACAMALR 245


>gi|224437134|ref|ZP_03658115.1| hypothetical protein HcinC1_04170 [Helicobacter cinaedi CCUG 18818]
          Length = 270

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 70/189 (37%), Gaps = 15/189 (7%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+       S      + + G +++   +  I +  I + + +  +  V    L+K 
Sbjct: 66  ALATNKLQACVGSFTGAAHYYKGGLVDLGQSRICIAIAVIFSGLGAFAVQFVSLEILSKI 125

Query: 130 FAIFCLLMGILMLKRDRLYCER--KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LML 186
                +L+G+  L   +L  +   K P  ++ Y+   V     G LGVG G F  +  + 
Sbjct: 126 LPFVMILVGMYFLFSPKLSDKDRAKSPCPFLLYMSCAVASVYGGLLGVGIGSFVLMIFVS 185

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
             G  + KA A S  +       + L+ I              G V     +++    ++
Sbjct: 186 IAGYGLSKALAHSRVLVFSGNLSSTLLFIIG------------GNVLWILGILMCVGQMI 233

Query: 247 ITPLATKLS 255
              L  KL+
Sbjct: 234 GATLGAKLA 242


>gi|330988037|gb|EGH86140.1| hypothetical protein PLA107_23640 [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 270

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 42/121 (34%), Gaps = 15/121 (12%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G + G +    G GGGI    L++F             G+   I   A +  +  G 
Sbjct: 9   VGLGAIIGVVLALTGAGGGILAVPLLVF-------------GLGLSIVEAAPVGLLAVGL 55

Query: 220 GLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    L  G V   A   I  I +L+ PL   L++ +    L + FS+++      
Sbjct: 56  AAGIGAVLGLRQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACTR 115

Query: 278 F 278
            
Sbjct: 116 M 116



 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 7/136 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++  L +    + G +  L G GGG++ VP+L     L  ++ +    +A+G + G+ A 
Sbjct: 3   EHQLLGVGLGAIIGVVLALTGAGGGILAVPLLVFGLGLSIVEAAPVGLLAVGLAAGIGAV 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +       R G +  +       +  +   +   +   +  + L   F++  L     
Sbjct: 63  LGL-------RQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACTR 115

Query: 141 MLKRDRLYCERKFPDN 156
           M  R         P  
Sbjct: 116 MFIRASRELRHGQPPP 131



 Score = 43.5 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 38/101 (37%), Gaps = 7/101 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V++P L++          + M   + TSL VIA  S  S +     G ++  +   +  
Sbjct: 177 FVIIPALTRY-------SDLDMKSVVATSLAVIALVSTGSVITASLSGVMHWTVGAPFAL 229

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
              I  +    +  ++    L + FA+  ++   ++     
Sbjct: 230 GAVIGLIAGRQVARYLAGPRLQQLFALCGIVAAFMLALSVH 270


>gi|255654841|ref|ZP_05400250.1| hypothetical protein CdifQCD-2_03892 [Clostridium difficile
           QCD-23m63]
 gi|296449584|ref|ZP_06891361.1| permease [Clostridium difficile NAP08]
 gi|296878093|ref|ZP_06902108.1| permease [Clostridium difficile NAP07]
 gi|296261648|gb|EFH08466.1| permease [Clostridium difficile NAP08]
 gi|296430846|gb|EFH16678.1| permease [Clostridium difficile NAP07]
          Length = 125

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            +++P L            I   +A   +L    P ++++   H ++  +  K++     
Sbjct: 22  TILIPALVLL-------AGIDTKIAQSVNLLSSIPMTLIALAIHIKNKNVIFKLVIPIAV 74

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
              +  V  SL+ +++    L K F +F LL+G+  +K+       K P
Sbjct: 75  FGVLGAVFGSLLANYLSSDILKKIFGVFLLLVGLFEVKKGFCAKSNKKP 123


>gi|325262805|ref|ZP_08129541.1| putative membrane protein [Clostridium sp. D5]
 gi|324031899|gb|EGB93178.1| putative membrane protein [Clostridium sp. D5]
          Length = 262

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 98/266 (36%), Gaps = 25/266 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + L     FL+  +  + G+GGG+++ P L        +D      ++  T L +   +
Sbjct: 2   LLLLFFAICFLASLVGAVCGIGGGILIKPFLDA---FQMMDVVTISFLSGCTVLSMSTYS 58

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-----DKSFLNKAFAIFCLL 136
            + S +       +N KI+        +  +V   + S +     +   +    A+  +L
Sbjct: 59  VMKSKLS--CRSNLNSKIIFPLSMGAALGGIVGKWLFSFLIANIQNSDRVGAIQAVCLIL 116

Query: 137 MGI----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT-NLLMLFYGAS 191
           + +      L ++++    +          G+V G LS  LG+GGG      L  F+  +
Sbjct: 117 VTLGTLVYTLFKNKIN-TYQMTSPLCCISVGVVLGNLSSFLGIGGGPVNLVALFFFFSMT 175

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
             +A   S  +       +LL  + SG     +P    G       L ++   +    L 
Sbjct: 176 SKEAAENSLYIIFFSQIASLLSSLISG----KIPELHFG-----IFLAMVMGGVAGGILG 226

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFV 277
             +S  +  + +   F  +M +  F+
Sbjct: 227 RAVSKHMEDRTVDRLFVKLMISIIFI 252


>gi|296534844|ref|ZP_06897182.1| membrane protein [Roseomonas cervicalis ATCC 49957]
 gi|296264829|gb|EFH11116.1| membrane protein [Roseomonas cervicalis ATCC 49957]
          Length = 304

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/284 (17%), Positives = 92/284 (32%), Gaps = 54/284 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + V+L    +     L++   F  G LSGLFGVGGG ++ P+L            I   V
Sbjct: 1   MQVYLPIAEMSVDALLLLGIGFGVGWLSGLFGVGGGFLLTPLLILI--------GIPAPV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS----- 124
           A+ +        SV   +   R G ++ ++    +    + +     + + + +      
Sbjct: 53  AVASGANQTLGASVSGLIAQWRRGNVDPRMGGVLLAGGFLGSFAGVQLFAWLRRQGQVDL 112

Query: 125 FLNKAFAIFCLLMGILML-----------------------------KRDRLYCERKFPD 155
            ++  + +    +G LM+                              + R    R +  
Sbjct: 113 AVSVFYVVILGTVGALMVRESVRAILRRRRQVAPARLHAHLWMHGLPFKLRFRKSRLYIS 172

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVR 214
                + G   G LS  +GVGGG      M++  G        TS      +A       
Sbjct: 173 VIPPLLVGFGIGVLSAVMGVGGGFMLVPAMIYLLGMPTAVVIGTSLFQVVFVAA------ 226

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                 +  L   S G V+I   L++L   +        +   +
Sbjct: 227 -----NVTLLQAVSTGSVDIVLTLLLLVGGVAGAQFGASMGTRL 265



 Score = 38.5 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 41/99 (41%), Gaps = 8/99 (8%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV-MS 85
           ++  F  G LS + GVGGG ++VP +            +   V +GTSL  +   +  ++
Sbjct: 177 LLVGFGIGVLSAVMGVGGGFMLVPAMIYLL-------GMPTAVVIGTSLFQVVFVAANVT 229

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
            ++    G++++ +    +          + M + +   
Sbjct: 230 LLQAVSTGSVDIVLTLLLLVGGVAGAQFGASMGTRLRGE 268


>gi|255324922|ref|ZP_05366030.1| permease [Corynebacterium tuberculostearicum SK141]
 gi|255297982|gb|EET77291.1| permease [Corynebacterium tuberculostearicum SK141]
          Length = 256

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 90/260 (34%), Gaps = 25/260 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++   +  +G +  + G GGGL+++P+L            +    A+GTS       + 
Sbjct: 9   VILFFGTAAAGWVDAVIG-GGGLILIPMLLAVL------PGLAPAAALGTSKLAAVTGTG 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + +   R   ++   +  ++ +  + + + + + S +DK  +     +  + +GI +  
Sbjct: 62  SAAVTLARKVKLDKAEMARFLLIALVCSGLGASVASSLDKDIMRPIIIVLMVAVGIFVAF 121

Query: 144 RDRLYCERKFPDNYV-----KYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           +                     +   +  F  G  G G G+F  +     +  +   + A
Sbjct: 122 KPDFGSSDSAGTRGGWRTVVVLVLSGIISFYDGIFGPGTGMFLIMAFTSIFAQNFLTSAA 181

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  V+    F AL+V I              G V     +++   +I    L  +    
Sbjct: 182 MAKVVNTATNFGALVVFIIG------------GHVWWTLGIVLGVANIAGALLGARTVLG 229

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
            G K++      ++   S  
Sbjct: 230 GGAKFIRYALLTLVVVMSCY 249


>gi|220933297|ref|YP_002512196.1| protein of unknown function DUF81 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219994607|gb|ACL71209.1| protein of unknown function DUF81 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 251

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 94/259 (36%), Gaps = 25/259 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ V + ++  LS L G G GLV +P L       G+        A+ T         +
Sbjct: 7   TLLFVIALMANLLSALSGGGAGLVQLPALIFLGLPFGV--------ALATHKVASVALGL 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + H +  T+  +     +       ++ +  I  V +     A  +  + +G+  + 
Sbjct: 59  GATLRHLKENTLERRFTGFILITGLPGVMIGASFILQVPERAAEIALGLLTMGLGLYSVL 118

Query: 144 RDRLY----CERKFPDNYVKYIWG-MVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
              L        +    Y+    G  + G L+G+L  G G+F  L ++ ++G    +A A
Sbjct: 119 SPGLGQAYLPRNRSRRGYLLGGVGLFLIGVLNGSLTSGTGLFCTLWLVYWFGLDYKRAVA 178

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  +         +   ++G G   L    LG +    +  ++  S++   L   L   
Sbjct: 179 YTLVL---------VGIFWNGTGA--LVLGVLGEIRWSWLPALIAGSLIGGYLGASLGIR 227

Query: 258 IGKKYLTIGFSMIMFTTSF 276
            G +++   F  +      
Sbjct: 228 HGNRWIKRAFEAVTLLVGL 246


>gi|300934584|ref|ZP_07149840.1| hypothetical protein CresD4_10973 [Corynebacterium resistens DSM
           45100]
          Length = 361

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 67/207 (32%), Gaps = 21/207 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA-MGTSLGVIAPT 81
           I +  +    +  + G  G+  G+    +L  +  L     S  +H A +GT+L      
Sbjct: 3   ILIFALVGLAAQLVDGALGMAFGITATTLLVFS-GLGPAHASAAVHFAEVGTTLF----- 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              S + H R   ++   +        +     + ++S++         +   +L+G  +
Sbjct: 57  ---SGLSHWRLKNVHWPTVLALGVPGAVGAFTGAYVLSNLSTKAAEPVVSTILVLLGAYV 113

Query: 142 LK----------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGA 190
           L           ++                 G+  GFL  + G G G  T   LM    A
Sbjct: 114 LVRSVAIPWQKTKNTQPAGSTAKSRMGLAALGLGGGFLDASGGGGWGPVTTSTLMSVGKA 173

Query: 191 SIYKATATSAGVSALIAFPALLVRIYS 217
              +   T      L++  A    ++ 
Sbjct: 174 EPRRIIGTVNTAEFLVSVSASAGFLFG 200


>gi|159038459|ref|YP_001537712.1| hypothetical protein Sare_2895 [Salinispora arenicola CNS-205]
 gi|157917294|gb|ABV98721.1| protein of unknown function DUF81 [Salinispora arenicola CNS-205]
          Length = 277

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 7/98 (7%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           V+VP L            + M  A+GTSL +IA  S  S      H      I+  +   
Sbjct: 182 VIVPALVLVL-------GLPMPTAVGTSLLIIAINSAASLATRAGHAHFEWPIILPFTIA 234

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
               ++    +   +  +   +AFA+  L +      R
Sbjct: 235 AMAASLAGKKIADRLPGTVSTRAFAVLILAVAAYTAAR 272



 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 71/261 (27%), Gaps = 49/261 (18%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L         D       A  +S+ ++  T+V+  + H R G +  +    +     
Sbjct: 29  VPALVYLLGQEPRD-------ATTSSVIIVGLTAVVGAVGHARSGHVRWRTGLPFGVTGF 81

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK------------------RDRLYCE 150
              +  +    +V+   L   FA    +  I ML                          
Sbjct: 82  TAAIAGTAANQYVEPHILLLGFAALMTIAAIGMLAHAHHATSLHDTFGDGLATGSTARTG 141

Query: 151 RKFPDNYVKYIWGMVTGFLSGALG------------VGGGIFTNLLMLFYGASIYKATAT 198
                       G         +G             GG +    L+L  G  +  A  T
Sbjct: 142 AAQLTRPEPARSGTGIAVKVAVVGLLVGFLTGFFGAGGGFVIVPALVLVLGLPMPTAVGT 201

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  + A+ +  +L  R                      +L     ++  +    K++  +
Sbjct: 202 SLLIIAINSAASLATRAGHAHFE------------WPIILPFTIAAMAASLAGKKIADRL 249

Query: 259 GKKYLTIGFSMIMFTTSFVFA 279
                T  F++++   +   A
Sbjct: 250 PGTVSTRAFAVLILAVAAYTA 270


>gi|114797933|ref|YP_760257.1| hypothetical protein HNE_1546 [Hyphomonas neptunium ATCC 15444]
 gi|114738107|gb|ABI76232.1| putative membrane protein [Hyphomonas neptunium ATCC 15444]
          Length = 287

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 85/257 (33%), Gaps = 22/257 (8%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+I A F++  L    G GGG       +    L G D  I   +A    L         
Sbjct: 36  LLIAAFFITAVLYASVGFGGGS----TYNALLVLSGADYRIVPAIA----LICNVFVVTG 87

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                 R G ++ + L  ++        +   +   + ++          L+ G+ +  +
Sbjct: 88  GVWRFSRTGDLSTRRLLPFLITSVPAAWIGGRLP--ISETTFVGLLGGALLISGVHLALQ 145

Query: 145 DRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
                             +    G   G LSG +G+GGGIF   ++  Y      A   +
Sbjct: 146 RATVESETVSQFRPIPPVLSAAIGGSIGILSGLVGIGGGIFLAPVL--YLMRWGNAKQIA 203

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS-YMI 258
           A  S  I   +L   +   + L  L   SL        + +L        + + L+ Y I
Sbjct: 204 AACSLFILVNSLSGLLGQAFKLQDLDLMSLALPYWLLPIAVLAGG----QIGSWLAGYHI 259

Query: 259 GKKYLTIGFSMIMFTTS 275
               + I  ++++   S
Sbjct: 260 KPSLIRIMTAILILYVS 276



 Score = 42.8 bits (100), Expect = 0.063,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 13/127 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L        G LSGL G+GGG+ + PVL        +       +A   SL  I   S+
Sbjct: 163 VLSAAIGGSIGILSGLVGIGGGIFLAPVLYL------MRWGNAKQIAAACSLF-ILVNSL 215

Query: 84  MSFMEH-RRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLM 137
              +    +   +++  L    ++LPI  +    + S +       S +    AI  L +
Sbjct: 216 SGLLGQAFKLQDLDLMSLALPYWLLPIAVLAGGQIGSWLAGYHIKPSLIRIMTAILILYV 275

Query: 138 GILMLKR 144
            + +L R
Sbjct: 276 SVQLLYR 282


>gi|148269678|ref|YP_001244138.1| hypothetical protein Tpet_0541 [Thermotoga petrophila RKU-1]
 gi|147735222|gb|ABQ46562.1| protein of unknown function DUF81 [Thermotoga petrophila RKU-1]
          Length = 241

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 83/200 (41%), Gaps = 12/200 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L+ +   L+G L+ L G GG ++ +P+L+           + + VA GT+   I   
Sbjct: 1   MIVLVFLGGILAGFLNVLAG-GGSMITLPILTAL--------GLGIDVANGTNRIAIILQ 51

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++++    +    + +K          +  ++ S +   ++K  L K   +  L+M + +
Sbjct: 52  NLVAIERFKAKKVLKIKEAILVALPAIVGAILGSSIAVQIEKELLQKIVGVIFLVMAVSL 111

Query: 142 LKRDRLYCERKFPDN--YVKYIWGMVTGFLSGALGVGGGI-FTNLLMLFYGASIYKATAT 198
           + + R++ E +       + YI   + G   G +  G G      + L  G  + K  A 
Sbjct: 112 VWKPRIWLEDRSVKRNWVLIYIAFFLIGIYGGFIQAGVGFLLMPAITLLLGYELVKTNAI 171

Query: 199 SAGVSALIAFPALLVRIYSG 218
              + A     +L++ I +G
Sbjct: 172 KVFIVASYNIISLIIFILNG 191


>gi|27377120|ref|NP_768649.1| hypothetical protein bll2009 [Bradyrhizobium japonicum USDA 110]
 gi|12620705|gb|AAG60981.1|AF322013_100 ID687 [Bradyrhizobium japonicum]
 gi|27350263|dbj|BAC47274.1| bll2009 [Bradyrhizobium japonicum USDA 110]
          Length = 238

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 65/160 (40%), Gaps = 5/160 (3%)

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           T+LG+    +  S     R+  ++  IL+  +F     ++   L++  +++        +
Sbjct: 41  TALGLNIVVAAYSTWLFNRNKVVDWTILRPLLFSSMPASLAGGLIV--LEEHMYKTLTGL 98

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYI-WGMVTGFLSGALGVGGGIFTNLLMLFYGA- 190
             LL   +M+ +     +R       + +  G V G +SG  GVGGG+F    ++     
Sbjct: 99  VLLLASAVMIMQRGRAVDRVGEIPLRESVSIGAVLGLVSGLTGVGGGVFLAPTLIALNWA 158

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSG-WGLNGLPPWSL 229
           S  +  A S       +    +  +++G +    L  +++
Sbjct: 159 SPRQTVALSPPFILANSTVGFVGALFTGQFPSPDLALYAI 198


>gi|307275573|ref|ZP_07556714.1| hypothetical protein HMPREF9521_01203 [Enterococcus faecalis
           TX2134]
 gi|306507678|gb|EFM76807.1| hypothetical protein HMPREF9521_01203 [Enterococcus faecalis
           TX2134]
 gi|315155020|gb|EFT99036.1| conserved hypothetical protein [Enterococcus faecalis TX0043]
 gi|315158800|gb|EFU02817.1| conserved hypothetical protein [Enterococcus faecalis TX0312]
          Length = 237

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 93/241 (38%), Gaps = 26/241 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILK 101
           GGG+++ PVL                +A  +S+ V    S+ S  +  ++G  I  K   
Sbjct: 2   GGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFVM-SISSTYKQYQNGVQIEWKKAA 54

Query: 102 DWIFVLPITTVVTSLMISHV-----DKSFLNKA-FAIFCLLMGILMLKRDRLYCERKFPD 155
              F   +  ++  L+++       ++  +    + I  L + +++L             
Sbjct: 55  SISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYIIMLLTLVLVLLYNQFSNWHLHLNG 114

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALL-V 213
             +  I G+  G LS  LG+GGG      L+LF+G  I  AT  S           L  +
Sbjct: 115 LSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMDIKSATVYSIITIFFSQLAKLGNI 174

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            + +G+ +            +  +L I+P ++    +    S  + ++ +   +S+++F 
Sbjct: 175 GLTTGFAVFD----------LTMLLAIIPAALFGGYVGGLFSKKLSQQRVAQIYSLVVFL 224

Query: 274 T 274
            
Sbjct: 225 V 225


>gi|330970411|gb|EGH70477.1| hypothetical protein PSYAR_07959 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 270

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 15/115 (13%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G V G +    G GGGI    L++F             G+   I   A +  +  G 
Sbjct: 9   VGLGTVIGMVLALTGAGGGILAVPLLVF-------------GLGLSIVEAAPVGLLAVGL 55

Query: 220 GLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
                    L  G V   A   I  I +L+ PL   L++ +    L + FS+++ 
Sbjct: 56  AAGIGAVLGLRQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLL 110



 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 40/101 (39%), Gaps = 7/101 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V++P L++          + M   + TSL VIA  S  S +     G ++  +   +  
Sbjct: 177 FVIIPALTRY-------SDLDMKSVVATSLAVIALVSTGSVITASLSGVMHWAVGAPFAL 229

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
              I  ++   +  ++    L + FA+  ++   ++    R
Sbjct: 230 GAVIGLIIGRQVARYLAGPRLQQLFAVCGIVAAFMLALSVR 270



 Score = 43.5 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 52/284 (18%), Positives = 102/284 (35%), Gaps = 45/284 (15%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++  L +    + G +  L G GGG++ VP+L     L  ++ +    +A+G + G+ A 
Sbjct: 3   EHQLLGVGLGTVIGMVLALTGAGGGILAVPLLVFGLGLSIVEAAPVGLLAVGLAAGIGAV 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +       R G +  +       +  +   +   +   +  + L   F++  L     
Sbjct: 63  LGL-------RQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACGR 115

Query: 141 MLKRDRLYCER-----------------------KFPDNYVKYIWGMVTGFLSGALGVGG 177
           M  R                                P      + G+ +G LSG LGVGG
Sbjct: 116 MFIRASRELRHGKPAPRAEVLPCVLNPLQGRLRWTMPCLRALTLTGVGSGLLSGLLGVGG 175

Query: 178 GIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSG-WGLNGLPPWSLGFVNIG 235
           G      +  Y    +    ATS  V AL++  +++    SG        P++LG     
Sbjct: 176 GFVIIPALTRYSDLDMKSVVATSLAVIALVSTGSVITASLSGVMHWAVGAPFALG----- 230

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           AV+ ++        +  +++  +    L   F++     +F+ A
Sbjct: 231 AVIGLI--------IGRQVARYLAGPRLQQLFAVCGIVAAFMLA 266


>gi|229521217|ref|ZP_04410637.1| hypothetical protein VIF_001741 [Vibrio cholerae TM 11079-80]
 gi|229341749|gb|EEO06751.1| hypothetical protein VIF_001741 [Vibrio cholerae TM 11079-80]
          Length = 261

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 69/189 (36%), Gaps = 16/189 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  + +   R G +++K ++  I    +   + +  + ++D + L   
Sbjct: 46  ALATNKLQSSFGSFSATLYFVRKGVVSLKTMRLAIACTFVGAALGAEAVQYIDATLLTSL 105

Query: 130 FAIFCLLMGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             +  L + +  L               +    +  G   GF  G  G G G IFT   +
Sbjct: 106 IPLLLLGISLYFLLAPTTKTHTGPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                S+ +ATA +  ++      AL   + +G     LP W +G       L +     
Sbjct: 166 ALGHFSLVEATARTKVLNFTSNIAALTFFLIAG-----LPIWEIG-------LTMAVGGF 213

Query: 246 LITPLATKL 254
           +   +  K+
Sbjct: 214 IGARMGAKV 222


>gi|108760661|ref|YP_629368.1| hypothetical protein MXAN_1108 [Myxococcus xanthus DK 1622]
 gi|108464541|gb|ABF89726.1| putative membrane protein [Myxococcus xanthus DK 1622]
          Length = 256

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 73/204 (35%), Gaps = 16/204 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++ L+ VA+ ++G +  + G GGGL+ +P L  A         +  HVA+GT+ G     
Sbjct: 7   HLILLCVAALIAGMVDAIAG-GGGLISLPALLAA--------GLPPHVALGTNKGQSVFG 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + +   R G ++  + +             + ++  V    L     +  + + + +
Sbjct: 58  SFAALVRFSRAGLVDGNLARVTFPFGLGGAFGGAALVLLVKPEVLKPLVLVLLIAVAVFL 117

Query: 142 LKRDRLY------CERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYK 194
             R                   +  +  +  G   G  G G G           G  + +
Sbjct: 118 AFRKSPRPGDMPEPGPPARARAIGALIALAIGTYDGFFGPGTGTFLIVAFSSLLGHGLAR 177

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A+A +  V+      ++ +  + G
Sbjct: 178 ASADAKVVNFASNLASVALFAFKG 201


>gi|149188770|ref|ZP_01867061.1| hypothetical protein VSAK1_25130 [Vibrio shilonii AK1]
 gi|148837431|gb|EDL54377.1| hypothetical protein VSAK1_25130 [Vibrio shilonii AK1]
          Length = 253

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 71/208 (34%), Gaps = 14/208 (6%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A    L ++      +   H +    + +ILK  +    +  V+  L +S   ++ L   
Sbjct: 48  AAAILLPILIVMDAFAVRHHYK--NADYRILKQMLPGSILGVVLAGLFLSVTPETGLKLT 105

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
             +  L          +       P     + W  + GF S A+  GGG  +  L+    
Sbjct: 106 IGLLSLAFCFQHWFGGKQSSST--PGKLSAWFWSALGGFSSTAIHAGGGPASIYLLPLRL 163

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +    AT A + A+I    ++  +  G              N+   L+++P + +   
Sbjct: 164 EKVTL-IATMAVLFAIINVVKVVPYVALGEFDET---------NLFTALLLIPFAPVGVK 213

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L   L + + ++ +       +F +   
Sbjct: 214 LGVMLLHKVSQERIYQLCYAFLFLSGAK 241


>gi|329890971|ref|ZP_08269314.1| hypothetical protein BDIM_26820 [Brevundimonas diminuta ATCC 11568]
 gi|328846272|gb|EGF95836.1| hypothetical protein BDIM_26820 [Brevundimonas diminuta ATCC 11568]
          Length = 269

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 8/116 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG-VIAPTSVMS 85
           +     +G LS + GVGGG ++VP +    +       +   V +GTSL  +I  T++ +
Sbjct: 141 LGLGVFAGILSAIMGVGGGFILVPAMLYVLR-------MKASVVVGTSLFQIIITTAITT 193

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            ++  R+ T+++ +    +    +     + +        +  A  +  LL+GI M
Sbjct: 194 VLQAGRNQTVDIVLSTILLLGGVVGAQYGAKLSGRFRAEEMRAALGLIVLLVGIQM 249



 Score = 43.5 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 80/267 (29%), Gaps = 54/267 (20%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M PVL       GI  +    VA+ +    +  +S    + +     ++ +I        
Sbjct: 1   MAPVLVFL----GIPPT----VAVASQASHVVASSTSGVIRYSGMKAVDYRIGGIMAVGG 52

Query: 108 PITTVVTSLMISHVD-----KSFLNKAFAIFCLLMGILMLKRD------------RLYCE 150
            +  V+   +  ++         +  ++ +F   +G +ML                   E
Sbjct: 53  ALGAVLGVELFRYLRLLGQADLVVALSYLLFLGSIGSMMLYESLTQILHRVRGETPPRKE 112

Query: 151 RKFP-------------------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
           R+ P                           G+  G LS  +GVGGG      ML+    
Sbjct: 113 RRRPMWLYGLPFKMRFPRSGLYISAIPPLGLGVFAGILSAIMGVGGGFILVPAMLYV-LR 171

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           +  +      +  +I   A+   + +G             V+I    I+L   ++     
Sbjct: 172 MKASVVVGTSLFQIIITTAITTVLQAGRNQT---------VDIVLSTILLLGGVVGAQYG 222

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            KLS     + +     +I+       
Sbjct: 223 AKLSGRFRAEEMRAALGLIVLLVGIQM 249


>gi|229828608|ref|ZP_04454677.1| hypothetical protein GCWU000342_00672 [Shuttleworthia satelles DSM
           14600]
 gi|229793202|gb|EEP29316.1| hypothetical protein GCWU000342_00672 [Shuttleworthia satelles DSM
           14600]
          Length = 253

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 72/209 (34%), Gaps = 16/209 (7%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
              +    +++   FL G +  + G GGGLV +P     + L G+        A+ T+  
Sbjct: 2   QVTIHTYLIVLPLLFLGGFVDSI-GGGGGLVSLPA----YLLAGLPPVP----AVATNKF 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             A  + ++      +  I  K     I +  I + + + +   +D   +         +
Sbjct: 53  SSAWGTGLTTGRFAINRLIPWKATLPAILMAFIGSTLGAHLALVIDTRVMTYLLYFILPV 112

Query: 137 MGILMLKRDRLYCERKFPDNYVKY------IWGMVTGFLSGALGVGGGIFTNL-LMLFYG 189
              L+L ++     +K      K       +     G   G  G G G F  + L +   
Sbjct: 113 TAFLVLNKNLFKEHKKSEQASGKATTIIAGLLAFFIGIYDGFYGPGTGTFLIIGLTILAR 172

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
             + +A   +  ++        +V + +G
Sbjct: 173 LPMTQANGMTKAINLTTNVAGAVVYLING 201


>gi|77454790|ref|YP_345658.1| hypothetical protein pREL1_0223 [Rhodococcus erythropolis PR4]
 gi|77019790|dbj|BAE46166.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
           PR4]
          Length = 280

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 88/259 (33%), Gaps = 48/259 (18%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L           ++    A   SL ++  TS+++ + H R   +  +    +  +  
Sbjct: 31  VPALVYLL-------AVEPQSATSASLIIVGITSIIAAISHARARHVRWRAAGVFGILGS 83

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN------------ 156
           +T    S++   VD   L  AFA   ++    ML+R R   +   P              
Sbjct: 84  VTAFGGSILNRSVDPQILLLAFAALMIVAAGAMLRRTRRGHDADVPTPNPAETEEMHPSA 143

Query: 157 -----------------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATAT 198
                                   +V GFL+G LGVGGG      ++   G ++  A  T
Sbjct: 144 VAVTTKPAKVKINTSQVVKLVTSALVVGFLTGFLGVGGGFLIVPALVLALGYTMPVAVGT 203

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  + ++ +  A   R+ +G  +               V+     +I  +     ++  +
Sbjct: 204 SLVIISITSAGAFTERLGTGAAIP-----------WEIVVPFTLAAIAGSFAGKIITDKV 252

Query: 259 GKKYLTIGFSMIMFTTSFV 277
               LT  F+ ++   +  
Sbjct: 253 SVTTLTRSFAALLLVVAVY 271



 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 8/119 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++ ++ + G L+G  GVGGG ++VP L  A           M VA+GTSL +I+ TS
Sbjct: 160 VVKLVTSALVVGFLTGFLGVGGGFLIVPALVLAL-------GYTMPVAVGTSLVIISITS 212

Query: 83  VMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +F E    G  I  +I+  +       +    ++   V  + L ++FA   L++ + 
Sbjct: 213 AGAFTERLGTGAAIPWEIVVPFTLAAIAGSFAGKIITDKVSVTTLTRSFAALLLVVAVY 271


>gi|315143962|gb|EFT87978.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
          Length = 237

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 91/240 (37%), Gaps = 24/240 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILK 101
           GGG+++ PVL                +A  +S+ V    S+ S  +  ++G  I  K   
Sbjct: 2   GGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFVM-SISSTYKQYQNGVQIEWKKAA 54

Query: 102 DWIFVLPITTVVTSLMISHV-----DKSFLNKA-FAIFCLLMGILMLKRDRLYCERKFPD 155
              F   +  ++  L+++       ++  +    + I  L + +++L             
Sbjct: 55  SISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYIIMLLTLVLVLLYNQFSNWHLHLNG 114

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVR 214
             +  I G+  G LS  LG+GGG      L+LF+G  I  AT  S            L  
Sbjct: 115 LSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMDIKSATVYSIITIFFSQLA-KLGN 173

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           I    G+           ++  +L I+P ++    +    S  + ++ +   +S+++F  
Sbjct: 174 IGLTTGVAVF--------DLTMLLAIIPAALFGGYVGGLFSKKLSQQRVAQIYSLVVFLV 225



 Score = 35.8 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 45/124 (36%), Gaps = 10/124 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + + ++     G LS   G+GGG + V  L   F        + +  A   S+  I 
Sbjct: 112 LNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFF-------GMDIKSATVYSIITIF 164

Query: 80  PTSVMSFMEHRRHGTI---NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            + +           +   ++ +L   I        V  L    + +  + + +++   L
Sbjct: 165 FSQLAKLGNIGLTTGVAVFDLTMLLAIIPAALFGGYVGGLFSKKLSQQRVAQIYSLVVFL 224

Query: 137 MGIL 140
           + +L
Sbjct: 225 VILL 228


>gi|28377726|ref|NP_784618.1| transport protein [Lactobacillus plantarum WCFS1]
 gi|254555911|ref|YP_003062328.1| transport protein [Lactobacillus plantarum JDM1]
 gi|28270559|emb|CAD63463.1| transport protein [Lactobacillus plantarum WCFS1]
 gi|254044838|gb|ACT61631.1| transport protein [Lactobacillus plantarum JDM1]
          Length = 253

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 65/156 (41%), Gaps = 2/156 (1%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            +   VA+ TSL V  P     F+   +   +N KI    I       +V +     + +
Sbjct: 43  GLATAVAVPTSLIVALPALFFGFLTQLKIKNVNFKIGNQMIIAAVPGIIVGTFSAQFIPQ 102

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPD--NYVKYIWGMVTGFLSGALGVGGGIFT 181
              N       L+MG ++L +   + ++       +    +G+++G + G  G+ GG  T
Sbjct: 103 QLYNWIVGTIFLIMGAMVLIKYVHHSKQTTAGHQPWQAAFFGLLSGLMVGIGGLSGGATT 162

Query: 182 NLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
              +   G +  +A  T+  V  +++  +L+  +++
Sbjct: 163 AAGLAILGLTAVEAAGTATYVLTVMSTISLIGHLFT 198


>gi|74317056|ref|YP_314796.1| hypothetical protein Tbd_1038 [Thiobacillus denitrificans ATCC
           25259]
 gi|74056551|gb|AAZ96991.1| uncharacterized conserved membrane protein [Thiobacillus
           denitrificans ATCC 25259]
          Length = 249

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 97/260 (37%), Gaps = 25/260 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ VAS  +   S L G G GL+  P+L       G+        A+ T         +
Sbjct: 5   LILFVASLAANFFSALSGGGAGLIQFPMLIFLGLPFGV--------ALATHKVASVALGL 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + H +   +  +     +       V+ ++ I  + +     A  +  L +G+  + 
Sbjct: 57  GATLRHLKESHLERRFAAVILAAGLPGVVLGAVTILQIPERAATLALGLLTLGLGVYSVF 116

Query: 144 RDRLYCERKFPDNYVKYIWG-----MVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
           + RL    +  +     + G      V GFL+G++  G G+F  + ++ ++G    +A A
Sbjct: 117 KPRLGLAHEPRNREGVALVGGAAGLFVVGFLNGSITSGTGLFLTIWLIRYFGLDYTRAVA 176

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  +            I++G G   L    +G V    +  +L  S+L   L + L+  
Sbjct: 177 YTLIL---------CGLIWNGTGA--LVLGVIGTVAWDWMPALLAGSLLGGYLGSHLAIR 225

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
            G  ++   F  +       
Sbjct: 226 KGNLWIKRAFETVTILIGLK 245


>gi|15642381|ref|NP_232014.1| hypothetical protein VC2384 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121588213|ref|ZP_01677957.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121727512|ref|ZP_01680630.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147673176|ref|YP_001217885.1| hypothetical protein VC0395_A1961 [Vibrio cholerae O395]
 gi|153216227|ref|ZP_01950331.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|153819132|ref|ZP_01971799.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153822762|ref|ZP_01975429.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|153825894|ref|ZP_01978561.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|153828837|ref|ZP_01981504.1| putative membrane protein [Vibrio cholerae 623-39]
 gi|227082508|ref|YP_002811059.1| putative Inner membrane protein [Vibrio cholerae M66-2]
 gi|229507552|ref|ZP_04397057.1| hypothetical protein VCF_002781 [Vibrio cholerae BX 330286]
 gi|229512252|ref|ZP_04401731.1| hypothetical protein VCE_003664 [Vibrio cholerae B33]
 gi|229519388|ref|ZP_04408831.1| hypothetical protein VCC_003418 [Vibrio cholerae RC9]
 gi|229528626|ref|ZP_04418016.1| hypothetical protein VCG_001712 [Vibrio cholerae 12129(1)]
 gi|229607058|ref|YP_002877706.1| hypothetical protein VCD_001967 [Vibrio cholerae MJ-1236]
 gi|254849505|ref|ZP_05238855.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255746941|ref|ZP_05420886.1| hypothetical protein VCH_003339 [Vibrio cholera CIRS 101]
 gi|262161516|ref|ZP_06030626.1| hypothetical protein VIG_002768 [Vibrio cholerae INDRE 91/1]
 gi|262192294|ref|ZP_06050450.1| membrane protein [Vibrio cholerae CT 5369-93]
 gi|297581013|ref|ZP_06942938.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|298500256|ref|ZP_07010061.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|5830763|emb|CAB54589.1| hypothetical protein [Vibrio cholerae]
 gi|9656956|gb|AAF95527.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547555|gb|EAX57658.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121630180|gb|EAX62582.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|124114414|gb|EAY33234.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|126510322|gb|EAZ72916.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126519707|gb|EAZ76930.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146315059|gb|ABQ19598.1| putative membrane protein [Vibrio cholerae O395]
 gi|148875713|gb|EDL73848.1| putative membrane protein [Vibrio cholerae 623-39]
 gi|149740392|gb|EDM54523.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|227010396|gb|ACP06608.1| putative Inner membrane protein [Vibrio cholerae M66-2]
 gi|227014279|gb|ACP10489.1| putative Inner membrane protein [Vibrio cholerae O395]
 gi|229332400|gb|EEN97886.1| hypothetical protein VCG_001712 [Vibrio cholerae 12129(1)]
 gi|229344077|gb|EEO09052.1| hypothetical protein VCC_003418 [Vibrio cholerae RC9]
 gi|229352217|gb|EEO17158.1| hypothetical protein VCE_003664 [Vibrio cholerae B33]
 gi|229355057|gb|EEO19978.1| hypothetical protein VCF_002781 [Vibrio cholerae BX 330286]
 gi|229369713|gb|ACQ60136.1| hypothetical protein VCD_001967 [Vibrio cholerae MJ-1236]
 gi|254845210|gb|EET23624.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255735343|gb|EET90743.1| hypothetical protein VCH_003339 [Vibrio cholera CIRS 101]
 gi|262028827|gb|EEY47481.1| hypothetical protein VIG_002768 [Vibrio cholerae INDRE 91/1]
 gi|262031844|gb|EEY50426.1| membrane protein [Vibrio cholerae CT 5369-93]
 gi|297534839|gb|EFH73675.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297540949|gb|EFH77003.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 261

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 69/189 (36%), Gaps = 16/189 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  + +   R G +++K ++  I    +   + +  + ++D + L   
Sbjct: 46  ALATNKLQSSFGSFSATLYFVRKGVVSLKAMRLAIACTFVGAALGAEAVQYIDATLLTSL 105

Query: 130 FAIFCLLMGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             +  L + +  L               +    +  G   GF  G  G G G IFT   +
Sbjct: 106 IPLLLLGISLYFLLAPTTKTHTGPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                S+ +ATA +  ++      AL   + +G     LP W +G       L +     
Sbjct: 166 ALGHFSLVEATARTKVLNFTSNIAALTFFLIAG-----LPIWEIG-------LTMAVGGF 213

Query: 246 LITPLATKL 254
           +   +  K+
Sbjct: 214 IGARMGAKV 222


>gi|113475725|ref|YP_721786.1| hypothetical protein Tery_2072 [Trichodesmium erythraeum IMS101]
 gi|110166773|gb|ABG51313.1| protein of unknown function DUF81 [Trichodesmium erythraeum IMS101]
          Length = 248

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 14/195 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + +AS +   +S L G G   +++P++      + I   I     +G         + 
Sbjct: 4   LWLALASMVGWFVSNLAGGGSSFLLMPIVGLFLGTIAIPPVITTGGILG---------NA 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                + +   IN  ++   +        + + + + +   +L+    +F L+ GI ++ 
Sbjct: 55  ERVFAYWQK--INWTVILWELPGAIFGGCLGAFIFTQIPVRWLSFLVGLFLLISGINLII 112

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
           +++          +     G +  FLSG +G   G       L YG    +   T A   
Sbjct: 113 KNQEKSFTV--RAWYFLPAGFIYSFLSGIIG-SMGPLLAPFYLNYGLEKEELLGTQAVNR 169

Query: 204 ALIAFPALLVRIYSG 218
            ++     +     G
Sbjct: 170 MVVHIFKAITYAIFG 184


>gi|313112824|ref|ZP_07798471.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624894|gb|EFQ08202.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 257

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 70/203 (34%), Gaps = 16/203 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +++ +  +G +    G GGGL+ +P    A         +  H    T+    A  + 
Sbjct: 11  AFLVLMTGFAGFVDSAAG-GGGLISLPAYLFA--------GLPPHYTYATNKFSAACGTT 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +     ++G +N+K+           + + + ++  +    L     +   +  +++L 
Sbjct: 62  FATANFFKNGAMNLKVGILAAIGSFAGSALGAHIVLLLSDELLRTMMFLILPVAAVVILW 121

Query: 144 RDRLYCERK------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
           +  L  + +           +    G+  G   G +G G G F  +      G  +  A 
Sbjct: 122 QRDLPDKNRDDGTLNLKKILLALGIGLGIGLYDGIVGPGTGTFAIIAFTTLMGFDLRTAN 181

Query: 197 ATSAGVSALIAFPALLVRIYSGW 219
                ++    + +L   + +G 
Sbjct: 182 GNGKVLNLASNYASLFTYLMNGL 204


>gi|315586646|gb|ADU41027.1| conserved hypothetical integral membrane protein [Helicobacter
           pylori 35A]
          Length = 255

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 73/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  + 
Sbjct: 1   MDIYALCIAIGLFTGILSGIFGI--------GGGMIIVPIMLATGHSFEESIGISILQMV 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFILKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R    +   ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDFIADTKRYHLQSLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       IY 
Sbjct: 173 KCVALGLFFILFSSISGAFSLIYH 196


>gi|317014096|gb|ADU81532.1| hypothetical protein HPGAM_03490 [Helicobacter pylori Gambia94/24]
          Length = 255

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 72/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  + 
Sbjct: 1   MDIYALYIAIGLFTGILSGIFGI--------GGGMIIVPIMLATGHSFEESIGISILQMV 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFILKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDLITDTKRYHLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       IY 
Sbjct: 173 KCVALGLFFILFSSISGAFSLIYH 196


>gi|192290291|ref|YP_001990896.1| hypothetical protein Rpal_1898 [Rhodopseudomonas palustris TIE-1]
 gi|192284040|gb|ACF00421.1| protein of unknown function DUF81 [Rhodopseudomonas palustris
           TIE-1]
          Length = 247

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 92/257 (35%), Gaps = 29/257 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++I  +   G +SGL G G  LV     S  F L     ++ + + +  S+   A T 
Sbjct: 6   LIILIAGALCGGFVSGLSGFGLALV-----SLGFWLYVFPPTVAVPLVLLCSMASQAST- 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +    +H     I+ K++  ++       +  S+++++ D         +F L      +
Sbjct: 60  MRMVWQH-----IDFKLVTPFLIGGLAGVIPGSVLVAYADPWGFKLFVGLFLL------I 108

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---YGASIYKATATS 199
               LY        +       V G++ G +G   G+     +L+    G   ++     
Sbjct: 109 FPPALYFTPPMALTFGGRWMDGVIGWIGGVMGGFAGLSGPPPILWASVRGWDKHQRRGVF 168

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
              ++ +   AL ++   G     +         + A ++ LP  +L   L  +  + + 
Sbjct: 169 QAFNSTVLIAALALQTAHGLVTRDV---------LYAAVLALPAILLGAWLGARTYHALS 219

Query: 260 KKYLTIGFSMIMFTTSF 276
            +        ++F +  
Sbjct: 220 DRSFRNVVLALLFLSGL 236


>gi|317177495|dbj|BAJ55284.1| hypothetical protein HPF16_0687 [Helicobacter pylori F16]
          Length = 255

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 73/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  +A
Sbjct: 1   MDIYALYIAIGLFTGILSGIFGI--------GGGMIIVPIMLATGHSFEESIGISILQMA 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFILKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDFIADTKRYHLQGLKLFLIGTLTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       IY 
Sbjct: 173 KCVALGLFFILFSSISGAFSLIYH 196


>gi|307266576|ref|ZP_07548108.1| protein of unknown function DUF81 [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|326390106|ref|ZP_08211667.1| protein of unknown function DUF81 [Thermoanaerobacter ethanolicus
           JW 200]
 gi|306918430|gb|EFN48672.1| protein of unknown function DUF81 [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|325993754|gb|EGD52185.1| protein of unknown function DUF81 [Thermoanaerobacter ethanolicus
           JW 200]
          Length = 118

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 7/119 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +    F++G ++GL G GGG ++VP L            I  H A  T++ +I P +++S
Sbjct: 7   LFSIGFITGIVNGLLGAGGGTLIVPALVFLL-------GIEDHKAHATAISIILPITLVS 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            + + ++  I++ +  +      +  ++ +  ++ +    L K F I  L+  + M   
Sbjct: 60  SLVYLQNKIIDIPLTINIALGSTMGGIIGAYFLNKISIPLLRKIFGIIMLIASVRMWIS 118


>gi|289522345|ref|ZP_06439199.1| tyrosine recombinase, phage integrase family [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289504181|gb|EFD25345.1| tyrosine recombinase, phage integrase family [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 262

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 96/259 (37%), Gaps = 24/259 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+I   F SG L+ L G GG L+ +P+L            + + VA  T+   +   +
Sbjct: 21  VALVIAVGFCSGFLNVLAG-GGSLLTIPLLVFM--------GLDVSVANATNRVGVLFQN 71

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V +     +     +K    +     +   + +     +D+ +L  A A+    M +L++
Sbjct: 72  VFAAQHFHKKSLFRLKDCLFFGLPSLLGAALGTFGAVSLDERYLRIAVAVLICCMAVLLV 131

Query: 143 KRDRL--YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATS 199
            +  +           +V  +   + G   G +  G G F    ++   G  +  A A  
Sbjct: 132 LKPDMWEREREISLPRWVLILAMFLIGVYGGFIQAGVGFFLLWALVGLGGKDLLHANALK 191

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             V A+    +L + + +G             VN    +++   + +        + + G
Sbjct: 192 VVVIAMFTTLSLAIFLLNGM------------VNFPLGVVLAIGNFMGGIAGAHFAILKG 239

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            ++L +  S+++  ++   
Sbjct: 240 NRWLRLILSVVVTVSAIRM 258


>gi|153802031|ref|ZP_01956617.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|229514017|ref|ZP_04403479.1| membrane protein [Vibrio cholerae TMA 21]
 gi|124122441|gb|EAY41184.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|229349198|gb|EEO14155.1| membrane protein [Vibrio cholerae TMA 21]
          Length = 261

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 69/189 (36%), Gaps = 16/189 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  + +   R G +++K ++  I    +   + +  + ++D + L   
Sbjct: 46  ALATNKLQSSFGSFSATLYFVRKGVVSLKAMRLAIACTFVGAALGAEAVQYIDATLLTSL 105

Query: 130 FAIFCLLMGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             +  L + +  L               +    +  G   GF  G  G G G IFT   +
Sbjct: 106 IPLLLLGISLYFLLAPTTKTHTGPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                S+ +ATA +  ++      AL   + +G     LP W +G       L +     
Sbjct: 166 ALGHFSLVEATARTKVLNFTSNIAALTFFLIAG-----LPIWEIG-------LTMAAGGF 213

Query: 246 LITPLATKL 254
           +   +  K+
Sbjct: 214 IGARMGAKV 222


>gi|261820382|ref|YP_003258488.1| hypothetical protein Pecwa_1064 [Pectobacterium wasabiae WPP163]
 gi|261604395|gb|ACX86881.1| protein of unknown function DUF81 [Pectobacterium wasabiae WPP163]
          Length = 254

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 92/254 (36%), Gaps = 25/254 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++  +F++G ++   G GGGL+ +P+            +  M +   +S        
Sbjct: 5   LLILLPIAFIAGAINAAVG-GGGLISMPMFYSTLPH--FTPAQIMGIDKFSS----VMGH 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +MS  +      +  +++   +        +   M+  +  S++     +   +M     
Sbjct: 58  LMSIRQFAARLRLPWRLMLPTVLAAVTGAYIGIRMLDFMPSSWMRPVIIVVLAIMVAYTW 117

Query: 143 KRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            R     +    +          I G + GF  G +G G G     L + F+     +AT
Sbjct: 118 FRPSFGSQDTSREPTRSDLIKGAILGFMIGFYDGFIGPGTGSFLLFLFIRFFHFDFLRAT 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  V+       L+  I +G             +N G  L +   +I  + + ++L+ 
Sbjct: 178 ACAKVVNFGTNSATLIFLIPAGL------------INYGIALPLGIAAICGSIVGSQLAL 225

Query: 257 MIGKKYLTIGFSMI 270
             G  ++   F ++
Sbjct: 226 KGGNYWIRRLFLIL 239


>gi|325971097|ref|YP_004247288.1| hypothetical protein SpiBuddy_1269 [Spirochaeta sp. Buddy]
 gi|324026335|gb|ADY13094.1| protein of unknown function DUF81 [Spirochaeta sp. Buddy]
          Length = 247

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 80/204 (39%), Gaps = 16/204 (7%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  +C II        ++G    GGGL+       A+  +G+        A+G +    
Sbjct: 3   ILFLLCPIIAFGSFVDAIAG----GGGLIT----LTAYVAVGLPP----QTALGNNKFAS 50

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           A  ++++ +++ R   +++ I         I + + S + +    ++LN         + 
Sbjct: 51  ASGTLVASIQYLRRSQVSLSIGLVATLFSFIGSAMGSALATRYADTYLNYLLVFLVPALA 110

Query: 139 ILMLKRDRLYCERKFPDNY---VKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYK 194
           + M+ +      ++    +   +  I G+V G   G  G G G   T +     G  + K
Sbjct: 111 LFMIFKPDFGQAQQKSRLFLYSLASITGLVIGCYDGFFGPGTGMFLTVIFTSVLGMDLLK 170

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A  T+  V+      AL + +Y G
Sbjct: 171 ACGTARIVNLASNVAALAMFLYHG 194


>gi|163853182|ref|YP_001641225.1| hypothetical protein Mext_3780 [Methylobacterium extorquens PA1]
 gi|254563091|ref|YP_003070186.1| hypothetical protein METDI4743 [Methylobacterium extorquens DM4]
 gi|163664787|gb|ABY32154.1| protein of unknown function DUF81 [Methylobacterium extorquens PA1]
 gi|254270369|emb|CAX26365.1| Conserved hypothetical protein; putative integral membrane protein
           [Methylobacterium extorquens DM4]
          Length = 263

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 80/239 (33%), Gaps = 24/239 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +P L     L G+D       A+ T+    +  SV + +   R G I  +    
Sbjct: 27  GGGLMTLPALL----LAGLDPVS----AIATNKLQGSAGSVSATIAFARRGLIRWREAGP 78

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK---FPDNYVK 159
                 + +V  +L +S + +  L+    +  + + +      R+  E            
Sbjct: 79  AALGAGLASVGGALCVSLLPRPVLDALVPLMLVGIALYFATARRMSNEDAAARITPGLFA 138

Query: 160 YIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
                  GF  G  G G G F     +   G  + +ATA +   +A     +L +     
Sbjct: 139 VTLAPAVGFYDGVFGPGAGSFYMIGFVTLLGLGVVRATAHTKLSNAASNLGSLALFTLQ- 197

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                      G V     L +   + L   + + L+  +G + +     +I    +  
Sbjct: 198 -----------GAVIWPVGLAMAVGAFLGAQVGSALAVRLGARLIRPLLVVIACAMALR 245


>gi|114047474|ref|YP_738024.1| hypothetical protein Shewmr7_1978 [Shewanella sp. MR-7]
 gi|113888916|gb|ABI42967.1| protein of unknown function DUF81 [Shewanella sp. MR-7]
          Length = 251

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 95/258 (36%), Gaps = 27/258 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L+ +AS  +   +  FG+GGG++++ V+++      I     + V +G++LG   
Sbjct: 13  IDIFTLLTLASAFTAFFTACFGIGGGVMLLGVMAQVLPPQVIIPLHGV-VQLGSNLG--- 68

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                          +   ++  ++    +   + SL++  +    +    A+F L    
Sbjct: 69  -------RALLGWQHVQWWLISRFLPGALVGAALGSLVLVALPPKVMYLTIALFILYSCW 121

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
                      R         I G +T F+S  +G  G       +       ++  AT 
Sbjct: 122 ------GPKIPRVVLGTAGTIIAGALTTFISLFVGATG-PLVAAFIKQLDVDRFRTVATF 174

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A   +L     + + ++ G  +  LP           +L ++    L T L  K+   + 
Sbjct: 175 AMAMSL--QHGVKILVFEGLDIPILP-------WWPLLLCMILSGALGTWLGFKMLARVT 225

Query: 260 KKYLTIGFSMIMFTTSFV 277
            K+ ++ F+ ++   +  
Sbjct: 226 DKHFSVAFNWVLTLLAIR 243


>gi|90415053|ref|ZP_01223012.1| hypothetical protein P3TCK_21913 [Photobacterium profundum 3TCK]
 gi|90323827|gb|EAS40437.1| hypothetical protein P3TCK_21913 [Photobacterium profundum 3TCK]
          Length = 252

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 92/258 (35%), Gaps = 34/258 (13%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  + ++CL+++  FL+G ++ L G GG  + +P L     +MG+       VA  T+  
Sbjct: 2   DITLLHVCLLLITGFLAGIINTLAG-GGSNLTLPALM----IMGMPAE----VANATNRV 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +A  +V +    +RHG ++   +   +    I  ++ +   +++   ++        L 
Sbjct: 53  GVAMQAVTAVSGFKRHGKMDSDDIIPILIPSVIGGLIGAAAAAYMPTEYIKPVLLGTMLT 112

Query: 137 MGILMLKRDRL----------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
           M  +ML +  L                   +   I G   GF+   +G    +    L  
Sbjct: 113 MAAVMLVKPSLIAPEPGTLVNKVRDTPSSWWGLGIAGFYGGFIQAGVGF---VLIAALAG 169

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
                + +A A     + +    AL V I  G             V     LI+   ++ 
Sbjct: 170 TLRYDLVRANALKMLCTLVFTVVALGVFITEGL------------VMWVPGLILAFGTMF 217

Query: 247 ITPLATKLSYMIGKKYLT 264
              +A  ++       L 
Sbjct: 218 GAHIAVNMAIKAQPATLK 235


>gi|53148485|dbj|BAD52078.1| hypothetical protein [Vibrio cholerae]
          Length = 231

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 69/189 (36%), Gaps = 16/189 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  + +   R G +++K ++  I    +   + +  + ++D + L   
Sbjct: 46  ALATNKLQSSFGSFSATLYFVRKGVVSLKAMRLAIACTFVGAALGAEAVQYIDATLLTSL 105

Query: 130 FAIFCLLMGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             +  L + +  L               +    +  G   GF  G  G G G IFT   +
Sbjct: 106 IPLLLLGISLYFLLAPTTKTHTGPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                S+ +ATA +  ++      AL   + +G     LP W +G       L +     
Sbjct: 166 ALGHFSLVEATARTKVLNFTSNIAALTFFLIAG-----LPIWEIG-------LTMAVGGF 213

Query: 246 LITPLATKL 254
           +   +  K+
Sbjct: 214 IGARMGAKV 222


>gi|113970334|ref|YP_734127.1| hypothetical protein Shewmr4_1997 [Shewanella sp. MR-4]
 gi|113885018|gb|ABI39070.1| protein of unknown function DUF81 [Shewanella sp. MR-4]
          Length = 251

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 95/258 (36%), Gaps = 27/258 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L+ +AS  +   +  FG+GGG++++ V+++      I     + V +G++LG   
Sbjct: 13  IDIFTLLTLASAFTAFFTACFGIGGGVMLLGVMAQVLPPQVIIPLHGV-VQLGSNLG--- 68

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                          +   ++  ++    +   + SL++  +    +    A+F L    
Sbjct: 69  -------RALLGWQHVQWWLISRFLPGALVGAALGSLVLVALPPKVMYLTIALFILYSCW 121

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
                      R         I G +T F+S  +G  G       +       ++  AT 
Sbjct: 122 ------GPKIPRVVLGTAGTIIAGALTTFISLFVGATG-PLVAAFIKQLDVDRFRTVATF 174

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A   +L     + + ++ G  +  LP           +L ++    L T L  K+   + 
Sbjct: 175 AMAMSL--QHGVKILVFEGLDIPILP-------WWPLLLCMILSGALGTWLGFKMLARVT 225

Query: 260 KKYLTIGFSMIMFTTSFV 277
            K+ ++ F+ ++   +  
Sbjct: 226 DKHFSVAFNWVLTLLAIR 243


>gi|261838088|gb|ACX97854.1| integral membrane protein [Helicobacter pylori 51]
 gi|332673524|gb|AEE70341.1| conserved hypothetical integral membrane protein [Helicobacter
           pylori 83]
          Length = 255

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 72/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  + 
Sbjct: 1   MDIYALYIAIGLFTGILSGIFGI--------GGGMIIVPIMLATGHSFEESIGISILQMV 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFILKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDFIADTKRYHLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       IY 
Sbjct: 173 KCVALGLFFILFSSISGAFSLIYH 196


>gi|13472005|ref|NP_103572.1| hypothetical protein mlr2161 [Mesorhizobium loti MAFF303099]
 gi|14022750|dbj|BAB49358.1| mlr2161 [Mesorhizobium loti MAFF303099]
          Length = 260

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 72/197 (36%), Gaps = 11/197 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + +  L G   GL G GG ++  P+L     +         H+A+GT    +A  +  +F
Sbjct: 9   LGSGGLVGFTLGLVGGGGSILATPLLLYVVGVAQP------HIAIGTGALAVAANAFANF 62

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             H   G +  +    +  +  +  +  S +   +D + L   F +  L++G LM+   R
Sbjct: 63  GSHALKGHVWWRCALVFAALGSVGALAGSTLGKSIDGAHLLFLFGLLMLVVGGLMVLPRR 122

Query: 147 LYCERKFPDNYVKYIW----GMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAG 201
                  P +           +V G  SG  G+GGG      L+L  G     A  TS  
Sbjct: 123 STSTTARPVDARMCAMTAAVAIVAGAASGFFGIGGGFLIVPGLILATGMPTINAIGTSLL 182

Query: 202 VSALIAFPALLVRIYSG 218
             A            SG
Sbjct: 183 AVAAFGLATAFNYALSG 199


>gi|54309373|ref|YP_130393.1| hypothetical protein PBPRA2195 [Photobacterium profundum SS9]
 gi|46913809|emb|CAG20591.1| hypothetical protein PBPRA2195 [Photobacterium profundum SS9]
          Length = 252

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 92/258 (35%), Gaps = 34/258 (13%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  + ++CL+++  FL+G ++ L G GG  + +P L     +MG+       VA  T+  
Sbjct: 2   DITLLHVCLLLITGFLAGIINTLAG-GGSNLTLPALM----IMGMPAE----VANATNRV 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +A  +V +    +RHG ++   +   +    I  ++ +   +++   ++        L+
Sbjct: 53  GVAMQAVTAVSGFKRHGKMDSDDIIPILIPSVIGGLIGAAAAAYMPTEYIKPVLLGTMLI 112

Query: 137 MGILMLKRDRL----------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
           M  +ML +                      +   I G   GF+   +G    +    L  
Sbjct: 113 MAAVMLVKPSFIAPEPGTLVNKVRDTPSSWWGLGIAGFYGGFIQAGVGF---VLIAALAG 169

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
                + +A A     + +    AL + I  G             V     LI+   ++ 
Sbjct: 170 TLRYDLVRANALKMLCTLVFTVVALGLFIAEGL------------VMWVPGLILAFGTMF 217

Query: 247 ITPLATKLSYMIGKKYLT 264
              +A  ++       L 
Sbjct: 218 GAHIAVNMAIKAQPATLK 235


>gi|313892217|ref|ZP_07825810.1| putative membrane protein [Dialister microaerophilus UPII 345-E]
 gi|313119355|gb|EFR42554.1| putative membrane protein [Dialister microaerophilus UPII 345-E]
          Length = 253

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 76/199 (38%), Gaps = 14/199 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I    F++G +  + G GGGL+ +P          I   + +H A+ T+    +  ++
Sbjct: 8   LFICPLVFIAGFIDAIAG-GGGLISIPA--------YIVSGVPVHAAIATNKMSSSMGTL 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +  +  R G I  K+    +    I ++  + +   +D         +   + G+ +L+
Sbjct: 59  WATYKFSRDGYIPWKLALSCVVFAFIGSIFGANIALAIDARTFLFCMLVLIPITGLYVLR 118

Query: 144 RDRLYCERKF----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
              L  E+          +  +   + G   G  G G G F  L++      S+ +A   
Sbjct: 119 SKSLIKEKIPFSFSKTAILSIVTSSLIGVYDGFYGPGTGTFLILILTGVSHVSLKQANGI 178

Query: 199 SAGVSALIAFPALLVRIYS 217
           +  +++     AL V + +
Sbjct: 179 TKVINSTTNLAALSVFLLN 197


>gi|320326741|gb|EFW82786.1| hypothetical protein PsgB076_00355 [Pseudomonas syringae pv.
           glycinea str. B076]
          Length = 270

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 42/121 (34%), Gaps = 15/121 (12%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G + G +    G GGGI    L++F             G+   I   A +  +  G 
Sbjct: 9   VGLGAIIGVVLALTGAGGGILAVPLLVF-------------GLGLSIVEAAPVGLLAVGL 55

Query: 220 GLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    L  G V   A   I  I +L+ PL   L++ +    L + FS+++      
Sbjct: 56  AAGIGAVLGLRQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACTR 115

Query: 278 F 278
            
Sbjct: 116 M 116



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 7/136 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++  L +    + G +  L G GGG++ VP+L     L  ++ +    +A+G + G+ A 
Sbjct: 3   EHQLLGVGLGAIIGVVLALTGAGGGILAVPLLVFGLGLSIVEAAPVGLLAVGLAAGIGAV 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +       R G +  +       +  +   +   +   +  + L   F++  L     
Sbjct: 63  LGL-------RQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACTR 115

Query: 141 MLKRDRLYCERKFPDN 156
           M  R         P  
Sbjct: 116 MFIRASRELRHGQPPP 131



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 7/101 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V++P L++          + M   + TSL VIA  S  S +     G ++  +   +  
Sbjct: 177 FVIIPALTRY-------SDLSMKSVVATSLAVIALVSTGSVITASLSGVMHWTVGAPFAL 229

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
              I  +    +  ++    L + FA+  ++   ++    R
Sbjct: 230 GAVIGLIAGRQVARYLVGPRLQQLFALCGIVAAFMLALSVR 270


>gi|229828088|ref|ZP_04454157.1| hypothetical protein GCWU000342_00138 [Shuttleworthia satelles DSM
           14600]
 gi|229792682|gb|EEP28796.1| hypothetical protein GCWU000342_00138 [Shuttleworthia satelles DSM
           14600]
          Length = 239

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 62/154 (40%), Gaps = 12/154 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L I+A+ L+  + GL G G  LV   + S     + I             L +  P++
Sbjct: 1   MWLFIIATLLAMFVKGLVGFGNTLVFDTITSYTANNVDISPVE---------LLLTYPSN 51

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++  + +R    ++ +I      V+ I +     ++ ++D   +   FA+  + M + M 
Sbjct: 52  LILALRNRSR--LDYRIWLPTAIVVVIGSFTGVNLLRYLDAHLVKIFFALVVIGMSVKMF 109

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
              R           V+ I+ +  G + G  GVG
Sbjct: 110 LDIRSNVSHPLRG-PVRVIFEIFAGLIFGMFGVG 142


>gi|71736726|ref|YP_272397.1| hypothetical protein PSPPH_0085 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71557279|gb|AAZ36490.1| membrane protein, putative [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 270

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 42/121 (34%), Gaps = 15/121 (12%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G + G +    G GGGI    L++F             G+   I   A +  +  G 
Sbjct: 9   VGLGAIIGVVLALTGAGGGILAVPLLVF-------------GLGLSIVEAAPVGLLAVGL 55

Query: 220 GLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    L  G V   A   I  I +L+ PL   L++ +    L + FS+++      
Sbjct: 56  AAGIGAVLGLRQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACTR 115

Query: 278 F 278
            
Sbjct: 116 M 116



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 7/136 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++  L +    + G +  L G GGG++ VP+L     L  ++ +    +A+G + G+ A 
Sbjct: 3   EHQLLGVGLGAIIGVVLALTGAGGGILAVPLLVFGLGLSIVEAAPVGLLAVGLAAGIGAV 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +       R G +  +       +  +   +   +   +  + L   F++  L     
Sbjct: 63  LGL-------RQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACTR 115

Query: 141 MLKRDRLYCERKFPDN 156
           M  R         P  
Sbjct: 116 MFIRASRELRHGQPPP 131



 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 7/101 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V++P L++          + M   + TSL VIA  S  S +     G ++  +   +  
Sbjct: 177 FVIIPALTRY-------SDLSMKSVVATSLAVIALVSTGSVITASLSGVMHWTVGAPFAL 229

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
              I  +    +  ++    L + FA+  ++   ++    R
Sbjct: 230 GAVIGLIAGRQVARYLVGPRLQQLFALCGIVAAFMLALSVR 270


>gi|312882683|ref|ZP_07742420.1| predicted permease [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369644|gb|EFP97159.1| predicted permease [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 251

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 83/216 (38%), Gaps = 18/216 (8%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           VA+ T         + + + H ++  I+ K+    I    +  V+ + +I  + + +  +
Sbjct: 44  VALATHKLASVALGLGAVVSHLKNRNIHSKVCLWIITFGSLGVVLGAHLILLIPELYAQR 103

Query: 129 AFAIFCLLMGILMLKRDR-----LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
              +  LL+G+    + +     +   R         +  ++ G ++G+L  G G+   L
Sbjct: 104 MLGVIILLLGVYSRLKTQLGHHEIATNRNLLGWCFGTVLIILIGIINGSLTAGSGLLVTL 163

Query: 184 LML-FYGASIYKATA-TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
           L++ ++G S  +A A T   V  +      +  + +G             V+   + ++L
Sbjct: 164 LLVRWFGYSYKQAVAMTMISVGLVWNALGGITILNTGVP-----------VHWPWLPLLL 212

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             S +   L   L++ +    + + F ++       
Sbjct: 213 LGSFIGGILGASLTHRLPNYIIKVCFEVVTLIVGLK 248


>gi|289626351|ref|ZP_06459305.1| hypothetical protein PsyrpaN_14632 [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289649847|ref|ZP_06481190.1| hypothetical protein Psyrpa2_19163 [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330867958|gb|EGH02667.1| hypothetical protein PSYAE_12031 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 270

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 42/121 (34%), Gaps = 15/121 (12%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G + G +    G GGGI    L++F             G+   I   A +  +  G 
Sbjct: 9   VGLGAIIGVVLALTGAGGGILAVPLLVF-------------GLGLSIVEAAPVGLLAVGL 55

Query: 220 GLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    L  G V   A   I  I +L+ PL   L++ +    L + FS+++      
Sbjct: 56  AAGIGAVLGLRQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACTR 115

Query: 278 F 278
            
Sbjct: 116 M 116



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 7/136 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++  L +    + G +  L G GGG++ VP+L     L  ++ +    +A+G + G+ A 
Sbjct: 3   EHQLLGVGLGAIIGVVLALTGAGGGILAVPLLVFGLGLSIVEAAPVGLLAVGLAAGIGAV 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +       R G +  +       +  +   +   +   +  + L   F++  L     
Sbjct: 63  LGL-------RQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACTR 115

Query: 141 MLKRDRLYCERKFPDN 156
           M  R         P  
Sbjct: 116 MFIRASRELRHGQPPP 131



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 7/101 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V++P L++          + M   + TSL VIA  S  S +     G ++  +   +  
Sbjct: 177 FVIIPALTRY-------SDLGMKSVVATSLAVIALVSTGSVITASLSGVMHWTVGAPFAL 229

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
              I  +    +  ++    L + FA+  ++   ++    R
Sbjct: 230 GAVIGLIAGRQVARYLAGPRLQQLFAVCGIVAAFMLALSVR 270


>gi|262404704|ref|ZP_06081259.1| membrane protein [Vibrio sp. RC586]
 gi|262349736|gb|EEY98874.1| membrane protein [Vibrio sp. RC586]
          Length = 261

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 69/189 (36%), Gaps = 16/189 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  + +   R G +++K ++  I    +   + +  + ++D + L   
Sbjct: 46  ALATNKLQSSFGSFSATLYFVRKGVVSLKAMRLAIACTFVGAALGAEAVQYIDATLLTSL 105

Query: 130 FAIFCLLMGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             +  L + +  L               +    +  G   GF  G  G G G IFT   +
Sbjct: 106 IPLLLLGISLYFLLAPTTKNHSGPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                S+ +ATA +  ++      AL   + +G     LP W +G       L +     
Sbjct: 166 ALGHFSLVEATARTKVLNFTSNIAALTFFLIAG-----LPIWQIG-------LTMAVGGF 213

Query: 246 LITPLATKL 254
           +   +  K+
Sbjct: 214 IGARMGAKV 222


>gi|257482517|ref|ZP_05636558.1| hypothetical protein PsyrptA_04563 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 270

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 42/121 (34%), Gaps = 15/121 (12%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G + G +    G GGGI    L++F             G+   I   A +  +  G 
Sbjct: 9   VGLGAIIGVVLALTGAGGGILAVPLLVF-------------GLGLSIVEAAPVGLLAVGL 55

Query: 220 GLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    L  G V   A   I  I +L+ PL   L++ +    L + FS+++      
Sbjct: 56  AAGIGAVLGLRQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACTR 115

Query: 278 F 278
            
Sbjct: 116 M 116



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 92/284 (32%), Gaps = 45/284 (15%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++  L +    + G +  L G GGG++ VP+L     L  ++ +    +A+G + G+ A 
Sbjct: 3   EHQLLGVGLGAIIGVVLALTGAGGGILAVPLLVFGLGLSIVEAAPVGLLAVGLAAGIGAV 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +       R G +  +       +  +   +   +   +  + L   F++  L     
Sbjct: 63  LGL-------RQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACTR 115

Query: 141 MLKRDRLYCERKFPD------------------------NYVKYIWGMVTGFLSGALGVG 176
           M  R         P                           +                 G
Sbjct: 116 MFIRASRELRHGQPPPRAEMLPCVLNPLQGRLRWTMPCLRALTLTGVGSGLLSGLLGVGG 175

Query: 177 GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG-WGLNGLPPWSLGFVNIG 235
           G +    L  +    +    ATS  V AL++  +++    SG        P++LG     
Sbjct: 176 GFVIIPALTRYSDLGMKSVVATSLAVIALVSTGSVITASLSGVMHWTVGAPFALG----- 230

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           AV+ ++           ++++ +    L   F++     +F+ A
Sbjct: 231 AVIGLIA--------GRQVAHYLAGPRLQQLFALCGIVAAFMLA 266



 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 7/101 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V++P L++          + M   + TSL VIA  S  S +     G ++  +   +  
Sbjct: 177 FVIIPALTRY-------SDLGMKSVVATSLAVIALVSTGSVITASLSGVMHWTVGAPFAL 229

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
              I  +    +  ++    L + FA+  ++   ++    R
Sbjct: 230 GAVIGLIAGRQVAHYLAGPRLQQLFALCGIVAAFMLALSVR 270


>gi|240140642|ref|YP_002965122.1| hypothetical protein MexAM1_META1p4207 [Methylobacterium extorquens
           AM1]
 gi|240010619|gb|ACS41845.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
          Length = 260

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 90/267 (33%), Gaps = 29/267 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L +++    G   GL G GG ++  P+L      +G+      HVA+GT    +A ++
Sbjct: 3   VVLALLSGGFVGFSLGLIGGGGSILATPLLIYV---VGVGQP---HVAIGTGALAVAVSA 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +F  H R G +       +     +  +  S +    D   L   FA+  + +G+LML
Sbjct: 57  MANFSGHWRAGNVRWGNALVFAAFGVVGALGGSTLGKAFDGERLLFLFALLMIAVGLLML 116

Query: 143 KRDRLYCERKFP---------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
           +        +              +  +   V G        GG +    L+   G  + 
Sbjct: 117 RSGERNGSGRAAAGAPSAPAFTPRLAAVALAVGGASGFFGIGGGFLIVPGLVFATGMPMI 176

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A  TS                 SG             ++       +   +L   +  +
Sbjct: 177 NAIGTSLFAVGAFGLATAANYALSGL------------IDWPVAAQYIVGGLLGGWVGMR 224

Query: 254 LSYMIGKKY--LTIGFSMIMFTTSFVF 278
           L+  +  +   L   F+ ++FT +   
Sbjct: 225 LACRLAGRKGALDRIFASLIFTVAAYM 251


>gi|254285958|ref|ZP_04960919.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150423868|gb|EDN15808.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 261

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 68/189 (35%), Gaps = 16/189 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  + +   R G +++  ++  I    +   + +  + ++D + L   
Sbjct: 46  ALATNKLQSSFGSFSATLYFVRKGVVSLNAMRLAIACTFVGAALGAEAVQYIDATLLTSL 105

Query: 130 FAIFCLLMGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             +  L + +  L               +    +  G   GF  G  G G G IFT   +
Sbjct: 106 IPLLLLGISLYFLLAPTTKTHTGPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                S+ +ATA +  ++      AL   + +G     LP W +G       L +     
Sbjct: 166 ALGHFSLVEATARTKVLNFTSNIAALTFFLIAG-----LPIWEIG-------LTMAVGGF 213

Query: 246 LITPLATKL 254
           +   +  K+
Sbjct: 214 IGARMGAKV 222


>gi|50727965|gb|AAT81376.1| putative inner membrane protein TsaS [Comamonas testosteroni]
          Length = 239

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/183 (11%), Positives = 59/183 (32%), Gaps = 13/183 (7%)

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
           +  + +   +  + +  ++   ++  +DK +      ++   +G   L R      R  P
Sbjct: 61  VRWRAIGAILPGMAVGALIGLWLMGQLDKRWPLFLLGLYITWVGWRTL-RHGQQAARALP 119

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV- 213
             +  +    + G L       G     +++      + +     A V  ++   A +  
Sbjct: 120 G-WTHHAGSGLVGVLEVMFATAG----PMVIALLQRRLREVAEIRATVPVVMVVAASIAI 174

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            +  G G          F      L I  + ++   L  +L+  I    +    ++++  
Sbjct: 175 AVLFGAGQIDRAHT---FERWLVALPIAFMGVV---LGNRLARHIPPPAMRRAMAVLLIA 228

Query: 274 TSF 276
           +  
Sbjct: 229 SGL 231


>gi|87119419|ref|ZP_01075316.1| hypothetical protein MED121_05760 [Marinomonas sp. MED121]
 gi|86164895|gb|EAQ66163.1| hypothetical protein MED121_05760 [Marinomonas sp. MED121]
          Length = 252

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 89/248 (35%), Gaps = 26/248 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+I   F++G ++ L G GG  + +P L     +MG+       +A  T+   +   S
Sbjct: 8   VSLLIGTGFIAGIINTLAG-GGSNLTLPALM----VMGMPAD----IANATNRVGVIMQS 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++  +  ++   +    +   +    +  +V SL+ S+    +L     +  + M ++ML
Sbjct: 59  IVGVLGFKKAKKLETSDITPVLIPTLVGGLVGSLLASYSPTEYLKPLLLVSMISMTLIML 118

Query: 143 KRDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
            +  +          K  +    +I   + G   G +  G G      +   G   Y   
Sbjct: 119 IKPGVISPPEGTIPHKIREKPSAWIALFIAGVYGGFVQAGVGFILIAALA--GTLRYDLI 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T+A          ++      W    L         I  +L +   +++ + LA K + 
Sbjct: 177 RTNALKMLCTIAFTIVSLAVFIWNDQIL--------WIPGLL-LSIGTMVGSHLAVKFAL 227

Query: 257 MIGKKYLT 264
               K L 
Sbjct: 228 KANPKTLK 235


>gi|150018764|ref|YP_001311018.1| hypothetical protein Cbei_3952 [Clostridium beijerinckii NCIMB
           8052]
 gi|149905229|gb|ABR36062.1| protein of unknown function DUF81 [Clostridium beijerinckii NCIMB
           8052]
          Length = 243

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/186 (11%), Positives = 63/186 (33%), Gaps = 11/186 (5%)

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
              I++KI+     +L    V  +L++       L     +  + + + ML R     + 
Sbjct: 61  RKNISLKIVIPLSLMLLAGIVPGTLLLKAGSDRILKCILGVVIVGIAVEMLTRKHSKIQN 120

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
           K  +     + G+++G L+G  G+G        +     +  +       +  +      
Sbjct: 121 KKTNILFLIVIGVISGILAGLYGIG--ALLVAYVSRTTENKNEFRGNICCIFLVDNIFRF 178

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
            + +++G               +   L + P  I+   +  K+   + ++ +      ++
Sbjct: 179 FLYLFTGILTKEA---------LIMALCLSPAVIIGMIIGVKVDSKMEEETVKKSVIALL 229

Query: 272 FTTSFV 277
             +  +
Sbjct: 230 IASGMI 235


>gi|331012835|gb|EGH92891.1| hypothetical protein PSYTB_24874 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 270

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 42/121 (34%), Gaps = 15/121 (12%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G + G +    G GGGI    L++F             G+   I   A +  +  G 
Sbjct: 9   VGLGAIIGVVLALTGAGGGILAVPLLVF-------------GLGLSIVEAAPVGLLAVGL 55

Query: 220 GLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    L  G V   A   I  I +L+ PL   L++ +    L + FS+++      
Sbjct: 56  AAGIGAVLGLRQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACTR 115

Query: 278 F 278
            
Sbjct: 116 M 116



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 44/284 (15%), Positives = 93/284 (32%), Gaps = 45/284 (15%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++  L +    + G +  L G GGG++ VP+L     L  ++ +    +A+G + G+ A 
Sbjct: 3   EHQLLGVGLGAIIGVVLALTGAGGGILAVPLLVFGLGLSIVEAAPVGLLAVGLAAGIGAV 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +       R G +  +       +  +   +   +   +  + L   F++  L     
Sbjct: 63  LGL-------RQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACTR 115

Query: 141 MLKRDRLYCERKFPD------------------------NYVKYIWGMVTGFLSGALGVG 176
           M  R         P                           +                 G
Sbjct: 116 MFIRASRELRHGHPPPRAEMLPCVLNPLQGRLRWTMPCLRALTLTGVGSGLLSGLLGVGG 175

Query: 177 GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG-WGLNGLPPWSLGFVNIG 235
           G +    L  +    +    ATS GV AL++  +++    SG        P++LG     
Sbjct: 176 GFVIIPALTRYSDLGMKSVVATSLGVIALVSTGSVITASLSGVMHWTVGAPFALG----- 230

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           AV+ ++           ++++ +    L   F++     +F+ A
Sbjct: 231 AVIGLIA--------GRQVAHYLAGPRLQQLFALCGIVAAFMLA 266



 Score = 43.1 bits (101), Expect = 0.045,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 7/101 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V++P L++          + M   + TSLGVIA  S  S +     G ++  +   +  
Sbjct: 177 FVIIPALTRY-------SDLGMKSVVATSLGVIALVSTGSVITASLSGVMHWTVGAPFAL 229

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
              I  +    +  ++    L + FA+  ++   ++    R
Sbjct: 230 GAVIGLIAGRQVAHYLAGPRLQQLFALCGIVAAFMLALSVR 270


>gi|218232046|ref|YP_002367171.1| inner membrane protein YfcA [Bacillus cereus B4264]
 gi|218160003|gb|ACK59995.1| inner membrane protein YfcA [Bacillus cereus B4264]
          Length = 223

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 82/213 (38%), Gaps = 16/213 (7%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           VA+ T+    +  ++M+ M   +   IN+K ++  I +  + +V    ++  +   +L  
Sbjct: 16  VAIATNKLQGSSGTLMATMIFIKKKEINLKDMRLSILMTFLGSVFGGWLVLQIRAEYLIM 75

Query: 129 AFAIFCLLMGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-L 184
                 +++G+  L    +  E   RK              GF  G  G G G    L  
Sbjct: 76  ILPFLLIIIGLYFLLSPNIANEDRPRKISMLLFALTVAPFLGFYDGFFGPGTGSLIALAF 135

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +L  G S  +ATA +  ++    F ALL  I  G        W++G       LI++   
Sbjct: 136 ILLCGYSATRATANAKILNFTSNFAALLYFIIFGQ-----IDWTIG-------LIMMLGQ 183

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           I+ + +  K+    G   +     ++ F  +  
Sbjct: 184 IIGSYIGAKMVLTKGTSLIRPIVVIVCFVMAIK 216


>gi|88801000|ref|ZP_01116550.1| hypothetical protein MED297_09636 [Reinekea sp. MED297]
 gi|88776267|gb|EAR07492.1| hypothetical protein MED297_09636 [Reinekea sp. MED297]
          Length = 251

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 100/270 (37%), Gaps = 36/270 (13%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  V ++ L+    F++G ++ L G GG  + +P L     +MG+       VA  T+  
Sbjct: 2   ELTVWFVVLLATTGFIAGIINTLAG-GGSNLTLPALM----MMGLPAD----VANATNRV 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   S++       HG + ++  +  +    +  +V + + S +  + L     I  + 
Sbjct: 53  GVFMQSLVGLKGFHGHGELPLQDARGILIPTLVGGLVGAAIASWMPTTLLKPILLITMIS 112

Query: 137 MGILMLKRDRL----------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
           M +++L +               + +     + ++ G+  GF+   +G    +    +  
Sbjct: 113 MSVVILLKPATVIPQAGEQPYRVQERRRAAAMLFLAGVYGGFVQAGVGF---VLIAAIAG 169

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
                + K  A     +      AL + I  G             V+    LI+   ++ 
Sbjct: 170 GLRYDLVKTNALKILCTMAFTAVALGLFIVRGQ------------VSWVPGLILAMATMA 217

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              +  +L+  + ++++     +++ T + 
Sbjct: 218 GAQVGVRLALNVSQRFMKWF--LLLMTVAA 245


>gi|326940192|gb|AEA16088.1| hypothetical protein CT43_CH2407 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 223

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 82/213 (38%), Gaps = 16/213 (7%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           VA+ T+    +  ++M+ M   +   IN+K ++  I +  + +V    ++  +   +L  
Sbjct: 16  VAIATNKLQGSSGTLMATMIFIKKKEINLKDMRLSILMTFLGSVFGGWLVLQIRAEYLIM 75

Query: 129 AFAIFCLLMGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-L 184
                 +++G+  L    +  E   RK              GF  G  G G G    L  
Sbjct: 76  ILPFLLIIIGLYFLLSPNIANEDRPRKISMLLFALTVAPFLGFYDGFFGPGTGSLIALAF 135

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +L  G S  +ATA +  ++    F ALL  I  G        W++G       LI++   
Sbjct: 136 ILLCGYSATRATANAKILNFTSNFAALLYFIIFGQ-----IDWTIG-------LIMMLGQ 183

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           I+ + +  K+    G   +     ++ F  +  
Sbjct: 184 IIGSYIGAKMVLTKGTALIRPIVVIVCFVMAIK 216


>gi|148243555|ref|YP_001228712.1| hypothetical protein SynRCC307_2456 [Synechococcus sp. RCC307]
 gi|147851865|emb|CAK29359.1| Uncharacterized conserved membrane protein [Synechococcus sp.
           RCC307]
          Length = 257

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 81/239 (33%), Gaps = 30/239 (12%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I+     G ++      G  V+VP +       G+        A GTS          +
Sbjct: 1   MIICGLAGGFINT-VAASGATVVVPSMIGLGLEAGV--------ANGTSRLAAVAGLATA 51

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
                + G I   +       +    +  SL+ + +   ++  A A   L + I ++ + 
Sbjct: 52  TWRFHQAGAIPWLLTLKATVPMVAGAIAGSLLATALSDQWITWAIAGSLLFVLICLISQP 111

Query: 146 RLYCERKFPDN--------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKAT 196
               ++  P +         + Y+    TGF +G + +G G+ T L+++   G  +  A 
Sbjct: 112 TRLLQQDEPSSKETETQLGPLFYLLMAATGFWAGFIALGSGVMTLLVLVLAGGIPLKTAN 171

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
                V    +  ALL+                G +N    L +    +    L  +L+
Sbjct: 172 ILKCFVRLSSSLVALLIFGLR------------GDINWLWALPLALSGMAGAHLGARLA 218


>gi|307823158|ref|ZP_07653388.1| protein of unknown function DUF81 [Methylobacter tundripaludum
           SV96]
 gi|307735933|gb|EFO06780.1| protein of unknown function DUF81 [Methylobacter tundripaludum
           SV96]
          Length = 127

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 37/83 (44%), Gaps = 1/83 (1%)

Query: 63  DSICMHVAMGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV 121
                H+A GT+L ++ P   + +  E+ RHG +++K        + + + + +   + +
Sbjct: 37  AGFSQHMATGTTLALLLPPVGLAAAFEYYRHGNVDIKAAVILAATMFLGSWIGAYFANQL 96

Query: 122 DKSFLNKAFAIFCLLMGILMLKR 144
               L   F +F   +G+ ++  
Sbjct: 97  AGPQLRLIFGLFVCGLGVYLVYG 119


>gi|208434595|ref|YP_002266261.1| hypothetical protein HPG27_636 [Helicobacter pylori G27]
 gi|208432524|gb|ACI27395.1| hypothetical protein HPG27_636 [Helicobacter pylori G27]
          Length = 255

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 72/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  + 
Sbjct: 1   MDIYALYIAIGLFTGILSGIFGI--------GGGLIIVPIMLATGHSFEESIGISILQMV 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFVLKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDFIADTKRYHLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       +Y 
Sbjct: 173 KCVALGLFFILFSSISGAFSLMYH 196


>gi|15611686|ref|NP_223337.1| hypothetical protein jhp0619 [Helicobacter pylori J99]
 gi|4155164|gb|AAD06192.1| putative [Helicobacter pylori J99]
          Length = 255

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 72/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  + 
Sbjct: 1   MDIYALYIAIGLFTGILSGIFGI--------GGGMIIVPIMLATGHSFEESIGISILQMV 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFILKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDLITDTKRYHLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       +Y 
Sbjct: 173 KCVALGLFFILFSSISGAFSLMYH 196


>gi|300934076|ref|ZP_07149332.1| hypothetical protein CresD4_08399 [Corynebacterium resistens DSM
           45100]
          Length = 261

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 45/94 (47%), Gaps = 8/94 (8%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS-FMEHRRHGTINMKILKDWI 104
            ++VP L+ A        ++ M  A+GTSL VI   +++S  +   +   ++  ++   +
Sbjct: 167 FLIVPALTIAL-------AVPMQWAVGTSLLVIFINTMISLVLRGGQITAVDYSVVAPVM 219

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            ++ +  +  + + S V    L  AF +F L++ 
Sbjct: 220 LMVIVGVLGGARLSSKVPAVALRTAFGVFLLVVA 253


>gi|218897428|ref|YP_002445839.1| inner membrane protein YfcA [Bacillus cereus G9842]
 gi|218544245|gb|ACK96639.1| inner membrane protein YfcA [Bacillus cereus G9842]
          Length = 223

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 82/213 (38%), Gaps = 16/213 (7%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           VA+ T+    +  ++M+ +   +   IN+K ++  I +    +V+   ++  +   +L  
Sbjct: 16  VAIATNKLQGSSGTLMATVFFIKKKEINLKEMRLSILMTFFGSVLGGWLVLQIRAEYLIM 75

Query: 129 AFAIFCLLMGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-L 184
                 +++G+  L    +  E   RK              GF  G  G G G    L  
Sbjct: 76  ILPFLLIIIGLYFLLSPNIANEDRPRKISMLLFALTVAPFLGFYDGFFGPGTGSLIALAF 135

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +L  G S  +ATA +  ++    F ALL  I  G        W++G       LI++   
Sbjct: 136 ILLCGYSATRATANAKILNFTSNFAALLYFIIFGQ-----IDWTIG-------LIMMLGQ 183

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           I+ + +  K+    G   +     ++ F  +  
Sbjct: 184 IIGSYIGAKMVLTKGTSLIRPIVVIVCFVMAIK 216


>gi|126662359|ref|ZP_01733358.1| hypothetical protein FBBAL38_03370 [Flavobacteria bacterium BAL38]
 gi|126625738|gb|EAZ96427.1| hypothetical protein FBBAL38_03370 [Flavobacteria bacterium BAL38]
          Length = 260

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 44/93 (47%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 + +   + M  A+GTSL +IA  S++ FM   ++ TI+   L  +  +  I   
Sbjct: 165 FLIIPSLVLFAKLPMKKAVGTSLFIIAMNSLIGFMGDVQNLTIDWLFLIKFTSLSIIGIF 224

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           +   +   +++S L K F  F LLM   +L ++
Sbjct: 225 IGIYLNRFINESQLKKGFGYFVLLMACFILLKE 257



 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 83/244 (34%), Gaps = 34/244 (13%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP+L     +  +        A   SL ++  TSV    ++   G +++K    +   
Sbjct: 26  LTVPILVYVLLINPV-------TATAYSLFIVGTTSVFGATQNYFKGLVDIKTGFLFAIP 78

Query: 107 LPITTVVT-SLMISHVD------------KSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
             +   +T   ++  +              SFL   FAI  L     MLK+ +       
Sbjct: 79  SFVAVFITRRFLVPLIPNIVIEKPIIIEKSSFLMALFAIIMLFAAFSMLKKKKEIVTTDL 138

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIF--TNLLMLFYGASIYKATATSAGVSALIAFPAL 211
             +    I       +   L   GG F     L+LF    + KA  TS     +IA  +L
Sbjct: 139 KSSLFSLIIQNFIIGIIIGLVGAGGGFLIIPSLVLFAKLPMKKAVGTSL---FIIAMNSL 195

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +  +     L          ++   ++    +SI+   +   L+  I +  L  GF   +
Sbjct: 196 IGFMGDVQNLT---------IDWLFLIKFTSLSIIGIFIGIYLNRFINESQLKKGFGYFV 246

Query: 272 FTTS 275
              +
Sbjct: 247 LLMA 250


>gi|291277525|ref|YP_003517297.1| inner membrane protein OxaA [Helicobacter mustelae 12198]
 gi|290964719|emb|CBG40574.1| putative integral membrane protein [Helicobacter mustelae 12198]
          Length = 278

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 32/219 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + +    +G  +G FG+GGG ++VP  S  F             A+G SL  +  +S+
Sbjct: 9   IFLSLVGLFTGITAGFFGIGGGEIVVP--SAIFAHFSYSH------AVGISLIQMLFSSL 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +  + +   G +++K      F   +   + S ++  +D   L   F I           
Sbjct: 61  VGSIINYSKGLLSLKEGFFAAFGGLMGAFLGSFLLKFIDDKILMSVFVIVVCYSFFKYAF 120

Query: 144 RDRLYCERKF-----------------------PDNYVKYIWGMVTGFLSGALGVGGGIF 180
            +      +                          + + +  G++TG  S  LG+GGGI 
Sbjct: 121 SNSKKQHFEEAHFSMHKEEGPKPCHGFISSSIDRTHAILFFAGLITGIFSIPLGMGGGIL 180

Query: 181 TNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
               + F+      K            +   ++   + G
Sbjct: 181 MVPFLGFFLKYDSKKIVPLGLFFVVFASLSGVVSLYHGG 219


>gi|254303466|ref|ZP_04970824.1| membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC
           10953]
 gi|148323658|gb|EDK88908.1| membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC
           10953]
          Length = 254

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 91/254 (35%), Gaps = 27/254 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++ V  F++  +  + G GGGL+ +P         G       H+A+GT+      ++
Sbjct: 8   FLILAVFCFIAAVVDAISG-GGGLISLPAYFAV----GFPP----HIALGTNKLSAFLST 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S  +  +   IN++I+            +       +D  +         +L+ +  L
Sbjct: 59  FASAFKFWKAKKINVEIVSKLFAFSLAGAAIGVKTAVSIDPKYFTPISFGILILVFLYAL 118

Query: 143 KRDRLYCERKFPDNYVKYIW-----GMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
           K   +  +  +     K I          GF  G LG G   F    ++  +      A+
Sbjct: 119 KNKNMGEKNYYKGTTPKTIILGKIMAFCLGFYDGFLGPGTAAFLMFCLIKIFKLDFSSAS 178

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             +  ++    F +L+V  +            LG +N    L I  +      + ++L+ 
Sbjct: 179 GNTKILNLSSNFASLVVFAF------------LGKLNWVYGLSIAVVMTFGAIIGSRLAI 226

Query: 257 MIGKKYLTIGFSMI 270
           + G K++   F ++
Sbjct: 227 LKGNKFIKPVFLVV 240


>gi|258514298|ref|YP_003190520.1| hypothetical protein Dtox_1011 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257778003|gb|ACV61897.1| protein of unknown function DUF81 [Desulfotomaculum acetoxidans DSM
           771]
          Length = 362

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 72/233 (30%), Gaps = 43/233 (18%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +   +    F+ G LSG  G GG  +M P +            +   +A+  ++      
Sbjct: 22  FAIKLAAIGFVGGLLSGFLGSGGAFIMTPAMMSL--------GVPGIMAVAANITHKFGK 73

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--------DKSFLNKAFAIF 133
           +++   +H   G ++ K+       L     V   M S V           +++  F + 
Sbjct: 74  AIVGSKKHGEFGNVDRKMGIVMFIALLAGVQVAVTMNSGVLHKLGQAGSNLYISVLFVVM 133

Query: 134 CLLMGILMLKRDR---------------------------LYCERKFPDNYVKYIWGMVT 166
              + + M +                                        ++    G  T
Sbjct: 134 LTGVSLFMARDISNIKKGIKPKGGGLAEKIKNINLPPMVYFKVANVRTSVWLALAVGFAT 193

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           GFL+G++GVGG I    ++   G   Y A  T   ++         +    G+
Sbjct: 194 GFLAGSIGVGGFIGVPAMIYILGVPTYVAAGTELFLAVFSGMQGAFMYALYGY 246



 Score = 41.2 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 8/133 (6%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
           N   MV+     V   + L +   F +G L+G  GVG G + VP +            + 
Sbjct: 167 NLPPMVYFKVANVRTSVWLALAVGFATGFLAGSIGVG-GFIGVPAMIYIL-------GVP 218

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
            +VA GT L +   + +     +  +G ++++I+        +   + ++    V    +
Sbjct: 219 TYVAAGTELFLAVFSGMQGAFMYALYGYVDLRIVLCLYLGSLLGLTLGAIGTRVVRGFQI 278

Query: 127 NKAFAIFCLLMGI 139
                    ++ I
Sbjct: 279 KIVMTSVIAVVAI 291


>gi|255604776|ref|XP_002538282.1| Inner membrane protein yfcA, putative [Ricinus communis]
 gi|223512929|gb|EEF24101.1| Inner membrane protein yfcA, putative [Ricinus communis]
          Length = 301

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 72/220 (32%), Gaps = 18/220 (8%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            L  +  +      +GT+       +  + +   R   +    +          +   + 
Sbjct: 79  TLFSVFPTTTPATLLGTNKVTGVMGTSAAAINFARKVAVRWSTVTPAAMAAFAFSFFGAY 138

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK-----YIWGMVTGFLSG 171
           +++H+    + KA     + + +  LK+           +  +      + G   GF  G
Sbjct: 139 VVTHIPTDLIRKALPFVLIAVALYTLKKKDFGTTHAPTLSGSREIFYAALIGGAVGFYDG 198

Query: 172 ALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
             G G G F   L +  +      A+A +  V+      AL    YS            G
Sbjct: 199 VFGPGTGSFLVFLFVRVFSYDFLSASAAAKFVNVATNLAALCWFGYS------------G 246

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            V     L++   ++  + + TKL+   G  ++   F ++
Sbjct: 247 HVIWQLGLLMAVFNVAGSLVGTKLAMKHGSVFVRKLFLVV 286


>gi|83646876|ref|YP_435311.1| permease [Hahella chejuensis KCTC 2396]
 gi|83634919|gb|ABC30886.1| predicted Permease [Hahella chejuensis KCTC 2396]
          Length = 276

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 11/122 (9%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
            +  + G+  G L G  G GG I    L+++           S G +   A P  L+ + 
Sbjct: 2   LIAALLGIAVGVLLGLTGAGGSIIAVPLLMW-----------SLGWTLPQAAPVALLAVS 50

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           +   L  +  W  G V   A  ++    +L+ P+    ++      L + F++++   + 
Sbjct: 51  AAATLGVVNAWPQGSVRYRAATVMALAGMLMAPIGLWAAHRAPVHLLALVFAVVLLGVAL 110

Query: 277 VF 278
             
Sbjct: 111 RM 112



 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 44/130 (33%), Gaps = 7/130 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +  +     G L GL G GG ++ VP+L  +           +  A   +L  ++  +
Sbjct: 1   MLIAALLGIAVGVLLGLTGAGGSIIAVPLLMWSLGW-------TLPQAAPVALLAVSAAA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +     G++  +          +   +            L   FA+  L + + M 
Sbjct: 54  TLGVVNAWPQGSVRYRAATVMALAGMLMAPIGLWAAHRAPVHLLALVFAVVLLGVALRMW 113

Query: 143 KRDRLYCERK 152
           ++ R   E  
Sbjct: 114 RQARRAPEEA 123



 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 8/100 (8%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILKDWIF 105
           V+VP L            +  H A+ TSL  +A TS  +       G T+   I   ++ 
Sbjct: 182 VIVPALRMV-------SPLPFHSAVATSLMAVALTSAGTVSLFMLSGKTLPWMIALPFVA 234

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
                 +    +        L + FA+    +G++M+ + 
Sbjct: 235 GAMAGMLGGRRLAPRFAGPHLQQGFAVIMAGVGVMMILKS 274


>gi|315149447|gb|EFT93463.1| conserved hypothetical protein [Enterococcus faecalis TX0012]
          Length = 237

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 92/241 (38%), Gaps = 26/241 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILK 101
           GGG+++ PVL                +A  +S+ V    S+ S  +  ++G  I  K   
Sbjct: 2   GGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFVM-SISSTYKQYQNGVQIEWKKAA 54

Query: 102 DWIFVLPITTVVTSLMISHV-----DKSFLNKA-FAIFCLLMGILMLKRDRLYCERKFPD 155
              F   +  ++  L+++       ++  +    + I  + + +++L             
Sbjct: 55  SISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYIIMLVTLVLVLLYNRFSNWHLHLNG 114

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALL-V 213
             +  I G+  G LS  LG+GGG      L+LF+G  I  AT  S           L  +
Sbjct: 115 LSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMDIKSATVYSIITIFFSQLAKLGNI 174

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            + +G+ +            +  +  I+P ++    +    S  + ++ +   +S+++F 
Sbjct: 175 GLTTGFAVFD----------LTMLWAIIPAALFGGYVGGLFSKKLSQQRVAQIYSLVVFL 224

Query: 274 T 274
            
Sbjct: 225 V 225



 Score = 35.8 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 22/130 (16%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + + ++     G LS   G+GGG + V  L   F        + +  A   S+  I 
Sbjct: 112 LNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFF-------GMDIKSATVYSIITIF 164

Query: 80  PTSVMSFMEHRRHGTI---------NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
            + +       + G I         ++ +L   I        V  L    + +  + + +
Sbjct: 165 FSQLA------KLGNIGLTTGFAVFDLTMLWAIIPAALFGGYVGGLFSKKLSQQRVAQIY 218

Query: 131 AIFCLLMGIL 140
           ++   L+ +L
Sbjct: 219 SLVVFLVILL 228


>gi|327438357|dbj|BAK14722.1| predicted permease [Solibacillus silvestris StLB046]
          Length = 255

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 86/253 (33%), Gaps = 23/253 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++     L+  +  +FG   G V++P L            I +H  +  +      +S 
Sbjct: 14  LILFAIGILASIVGVMFGA-AGFVLLPSLLLV--------GIPIHATVAINKFATGISSF 64

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + +       + +K +  ++ +  I  +  + + + + +  +N    I  ++M   ++K
Sbjct: 65  STVIVLTLKKRVQLKKMIPFMLIAAIGGISGAFLATRLAEHTMNIVACIVLIVMFFFLIK 124

Query: 144 RDRLYCERKFPD--NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
             +     + PD       I         G LG G  +      L    S   A   +  
Sbjct: 125 SKKKEVINEQPDIEKKTNLIAPFFISIYDGGLGTGSALLNITYFLKKQVSYVMAAEMTRF 184

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           +       A L  ++ G             VN G  + +   SI+ + +  K+   +  K
Sbjct: 185 LMFASCTTAFLFYLFYGI------------VNWGVAVPVAVGSIVGSHIGLKIIPYLKGK 232

Query: 262 YLTIGFSMIMFTT 274
           ++ I   +I F  
Sbjct: 233 WVEILLPIIFFLL 245


>gi|229547659|ref|ZP_04436384.1| protein of hypothetical function DUF81 [Enterococcus faecalis
           TX1322]
 gi|293384839|ref|ZP_06630682.1| putative membrane protein [Enterococcus faecalis R712]
 gi|293388830|ref|ZP_06633320.1| putative membrane protein [Enterococcus faecalis S613]
 gi|312908137|ref|ZP_07767115.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
 gi|312952089|ref|ZP_07770971.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
 gi|312979073|ref|ZP_07790788.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
 gi|229307151|gb|EEN73138.1| protein of hypothetical function DUF81 [Enterococcus faecalis
           TX1322]
 gi|291077843|gb|EFE15207.1| putative membrane protein [Enterococcus faecalis R712]
 gi|291081806|gb|EFE18769.1| putative membrane protein [Enterococcus faecalis S613]
 gi|310625845|gb|EFQ09128.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
 gi|310629936|gb|EFQ13219.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
 gi|311288107|gb|EFQ66663.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
 gi|315028419|gb|EFT40351.1| conserved hypothetical protein [Enterococcus faecalis TX4000]
 gi|315153958|gb|EFT97974.1| conserved hypothetical protein [Enterococcus faecalis TX0031]
 gi|315167712|gb|EFU11729.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
 gi|315170827|gb|EFU14844.1| conserved hypothetical protein [Enterococcus faecalis TX1342]
 gi|315173886|gb|EFU17903.1| conserved hypothetical protein [Enterococcus faecalis TX1346]
 gi|315574937|gb|EFU87128.1| conserved hypothetical protein [Enterococcus faecalis TX0309B]
 gi|315582192|gb|EFU94383.1| conserved hypothetical protein [Enterococcus faecalis TX0309A]
          Length = 237

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 92/241 (38%), Gaps = 26/241 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILK 101
           GGG+++ PVL                +A  +S+ V    S+ S  +  ++G  I  K   
Sbjct: 2   GGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFVM-SISSTYKQYQNGVQIEWKKAA 54

Query: 102 DWIFVLPITTVVTSLMISHV-----DKSFLNKA-FAIFCLLMGILMLKRDRLYCERKFPD 155
              F   +  ++  L+++       ++  +    + I  L + +++L             
Sbjct: 55  SISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYIIMLLTLVLVLLYNQFSNWHLHLNG 114

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALL-V 213
             +  I G+  G LS  LG+GGG      L+LF+G  I  AT  S           L  +
Sbjct: 115 LSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMDIKSATVYSIITIFFSQLAKLGNI 174

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            + +G+ +            +  +  I+P ++    +    S  + ++ +   +S+++F 
Sbjct: 175 GLTTGFAVFD----------LTMLWAIIPAALFGGYVGGLFSKKLSQQRVAQIYSLVVFL 224

Query: 274 T 274
            
Sbjct: 225 V 225



 Score = 35.8 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 22/130 (16%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + + ++     G LS   G+GGG + V  L   F        + +  A   S+  I 
Sbjct: 112 LNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFF-------GMDIKSATVYSIITIF 164

Query: 80  PTSVMSFMEHRRHGTI---------NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
            + +       + G I         ++ +L   I        V  L    + +  + + +
Sbjct: 165 FSQLA------KLGNIGLTTGFAVFDLTMLWAIIPAALFGGYVGGLFSKKLSQQRVAQIY 218

Query: 131 AIFCLLMGIL 140
           ++   L+ +L
Sbjct: 219 SLVVFLVILL 228


>gi|296116021|ref|ZP_06834641.1| hypothetical protein GXY_09514 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295977375|gb|EFG84133.1| hypothetical protein GXY_09514 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 351

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 78/194 (40%), Gaps = 12/194 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I+VAS L+  +S + G G GL+++P+L      M +  ++ +  A  ++  +I+      
Sbjct: 34  ILVASTLAFGISAVSGGGAGLILMPLLGLVLPDMQVPAALSIGTATSSAARIISF----- 88

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
                 H  I   I++ +       + + +  +S ++  +L+    +F +    L+ +  
Sbjct: 89  ------HKAIRWDIVRHFAPTALPFSALGAWALSRMNPVYLSLLLGLFLVGNLPLLFRTP 142

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
            +   RK       +  G   GF+SG  G  G IF        G    +  AT A    +
Sbjct: 143 PIQPNRKPVRIVSLHALGAAAGFISGFTGAIGLIFNGFYYQL-GLRKEEIVATRAANEIM 201

Query: 206 IAFPALLVRIYSGW 219
           +    L++    G 
Sbjct: 202 LHGLKLILYAAFGL 215


>gi|317180440|dbj|BAJ58226.1| hypothetical protein HPF32_0644 [Helicobacter pylori F32]
          Length = 255

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 73/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  +A
Sbjct: 1   MDIYALYIAIGLFTGILSGIFGI--------GGGLIIVPIMLATGHSFEESIGISILQMA 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFVLKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDFTADTKRYPLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       IY 
Sbjct: 173 KCVALGLFFILFSSISGAFSLIYH 196


>gi|307268584|ref|ZP_07549956.1| hypothetical protein HMPREF9498_00718 [Enterococcus faecalis
           TX4248]
 gi|307288815|ref|ZP_07568793.1| hypothetical protein HMPREF9505_02199 [Enterococcus faecalis
           TX0109]
 gi|306500284|gb|EFM69623.1| hypothetical protein HMPREF9505_02199 [Enterococcus faecalis
           TX0109]
 gi|306515073|gb|EFM83616.1| hypothetical protein HMPREF9498_00718 [Enterococcus faecalis
           TX4248]
 gi|315026282|gb|EFT38214.1| conserved hypothetical protein [Enterococcus faecalis TX2137]
 gi|315032234|gb|EFT44166.1| conserved hypothetical protein [Enterococcus faecalis TX0017]
 gi|315035548|gb|EFT47480.1| conserved hypothetical protein [Enterococcus faecalis TX0027]
 gi|315146827|gb|EFT90843.1| conserved hypothetical protein [Enterococcus faecalis TX4244]
 gi|329575068|gb|EGG56620.1| hypothetical protein HMPREF9520_01808 [Enterococcus faecalis
           TX1467]
          Length = 237

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 92/241 (38%), Gaps = 26/241 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILK 101
           GGG+++ PVL                +A  +S+ V    S+ S  +  ++G  I  K   
Sbjct: 2   GGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFVM-SISSTYKQYQNGVQIEWKKAA 54

Query: 102 DWIFVLPITTVVTSLMISHV-----DKSFLNKA-FAIFCLLMGILMLKRDRLYCERKFPD 155
              F   +  ++  L+++       ++  +    + I  L + +++L             
Sbjct: 55  SISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYIIMLLTLVLVLLYNQFSNWHLHLNG 114

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALL-V 213
             +  I G+  G LS  LG+GGG      L+LF+G  I  AT  S           L  +
Sbjct: 115 LSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMDIKSATVYSIITIFFSQLAKLGNI 174

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            + +G+ +            +  +  I+P ++    +    S  + ++ +   +S+++F 
Sbjct: 175 GLTTGFAVFD----------LTMLWAIIPAALFGGYVGGLFSKKLSQQRVAQIYSLVVFL 224

Query: 274 T 274
            
Sbjct: 225 V 225



 Score = 35.8 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 22/130 (16%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + + ++     G LS   G+GGG + V  L   F        + +  A   S+  I 
Sbjct: 112 LNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFF-------GMDIKSATVYSIITIF 164

Query: 80  PTSVMSFMEHRRHGTI---------NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
            + +       + G I         ++ +L   I        V  L    + +  + + +
Sbjct: 165 FSQLA------KLGNIGLTTGFAVFDLTMLWAIIPAALFGGYVGGLFSKKLSQQRVAQIY 218

Query: 131 AIFCLLMGIL 140
           ++   L+ +L
Sbjct: 219 SLVVFLVILL 228


>gi|238020264|ref|ZP_04600690.1| hypothetical protein GCWU000324_00139 [Kingella oralis ATCC 51147]
 gi|237868658|gb|EEP69662.1| hypothetical protein GCWU000324_00139 [Kingella oralis ATCC 51147]
          Length = 256

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 70/199 (35%), Gaps = 12/199 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +IVA F +G +    G GGGL+ +P L           +  +   +G +       + M+
Sbjct: 8   LIVAGFAAGLMDAAVG-GGGLLQIPALFGLL-----PGNTPVPSVLGVNKFASFTGTAMA 61

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
             +  R   +  ++L     +    +   + + + V   ++  A     L M +    + 
Sbjct: 62  AGQFVRRVRVPWRMLLPAAVLAFAASFFGAKLSALVPVRYMKPAMLAVMLAMLVYTFCKK 121

Query: 146 RL-----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATATS 199
            L            +  V    G   G   G LG G G     + + F+      ATA++
Sbjct: 122 DLGQMVRDAALTRREYAVGLATGAAIGLYDGILGPGTGSLLAFVFVRFFAYDFLTATASA 181

Query: 200 AGVSALIAFPALLVRIYSG 218
             ++      AL   + +G
Sbjct: 182 KVINLTTNLAALAFFVPNG 200


>gi|229524373|ref|ZP_04413778.1| membrane protein [Vibrio cholerae bv. albensis VL426]
 gi|229337954|gb|EEO02971.1| membrane protein [Vibrio cholerae bv. albensis VL426]
          Length = 261

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 69/189 (36%), Gaps = 16/189 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  + +   R G +++K ++  I    +   + +  + ++D + L   
Sbjct: 46  ALATNKLQSSFGSFSATLYFVRKGVVSLKAMRLAIACTFVGAALGAEAVQYIDATLLTSL 105

Query: 130 FAIFCLLMGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             +  L + +  L               +    +  G   GF  G  G G G IFT   +
Sbjct: 106 IPLLLLGISLYFLLAPTTKTHTGPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                S+ +ATA +  ++      AL   + +G     LP W +G       L +     
Sbjct: 166 ALGHFSLVEATARTKVLNFTSNIAALTFFLIAG-----LPIWEIG-------LTMAVGGF 213

Query: 246 LITPLATKL 254
           +   +  K+
Sbjct: 214 IGARMGAKV 222


>gi|212702048|ref|ZP_03310176.1| hypothetical protein DESPIG_00050 [Desulfovibrio piger ATCC 29098]
 gi|212674563|gb|EEB35046.1| hypothetical protein DESPIG_00050 [Desulfovibrio piger ATCC 29098]
          Length = 362

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 49/118 (41%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G ++G+FG+G G   VPVL+           + + V++GTS  +++ T   + 
Sbjct: 248 LLLFIVIGIMAGMFGLGAGWANVPVLNLLM-------GVPLKVSVGTSKFLLSITDTSAA 300

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +   G +   +    I  L + +VV   +++     F+           G   L +
Sbjct: 301 WVYLNQGCVIPLMAIPSIVGLMLGSVVGVRLLAKAKPKFIRIMVIAVLFFSGAKALLK 358



 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 97/283 (34%), Gaps = 48/283 (16%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++   F+ G ++ + GVGGG++ VP++S  F          +    G  L V    ++
Sbjct: 91  VALLFFCFILGIIAVMAGVGGGVLFVPLVSGFFPF-------HLDFVRGAGLLVALAGAL 143

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +     R    N+++      +    ++V +++   +    +     +  L + +L+  
Sbjct: 144 AAGPGLLRRNFANLRLALPVALIASACSIVGAMLGLALPTDIIQTCLGVTILGIAVLLFF 203

Query: 144 RDRLYCERKFPDNYVKYIWG----------------------------MVTGFLSGALGV 175
                       + V    G                            +V G ++G  G+
Sbjct: 204 SKNSVRPVVNKQDAVGLALGMNGVFLEPSTGEVVDWKTHRTLAGLLLFIVIGIMAGMFGL 263

Query: 176 GGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           G G     ++ L  G  +  +  TS  + ++    A  V +  G  +  +         I
Sbjct: 264 GAGWANVPVLNLLMGVPLKVSVGTSKFLLSITDTSAAWVYLNQGCVIPLMA--------I 315

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            +++ ++  S+    +  +L      K++ I    ++F +   
Sbjct: 316 PSIVGLMLGSV----VGVRLLAKAKPKFIRIMVIAVLFFSGAK 354


>gi|15645301|ref|NP_207471.1| hypothetical protein HP0677 [Helicobacter pylori 26695]
 gi|2313804|gb|AAD14882.1| conserved hypothetical integral membrane protein [Helicobacter
           pylori 26695]
          Length = 255

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 73/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  +A
Sbjct: 1   MDIYALYIAIGLFTGILSGIFGI--------GGGLIIVPIMLATGHSFEESIGISILQMA 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFVLKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDLIADTKRYHLQGLKLFLIGTLTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       +Y 
Sbjct: 173 KCVALGLFFILFSSISGAFSLMYH 196


>gi|300314068|ref|YP_003778160.1| permease [Herbaspirillum seropedicae SmR1]
 gi|300076853|gb|ADJ66252.1| permease protein [Herbaspirillum seropedicae SmR1]
          Length = 303

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 72/220 (32%), Gaps = 18/220 (8%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            L  +  +      +GT+       +  + +   R   +    +          +   + 
Sbjct: 81  TLFSVFPTTTPATLLGTNKVTGVMGTSAAAINFARKVAVRWSTVTPAAMAAFAFSFFGAY 140

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK-----YIWGMVTGFLSG 171
           +++H+    + KA     + + +  LK+           +  +      + G   GF  G
Sbjct: 141 VVTHIPTDLIRKALPFVLIAVALYTLKKKDFGTTHAPTLSGSREIFYAALIGGAVGFYDG 200

Query: 172 ALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
             G G G F   L +  +      A+A +  V+      AL    YS            G
Sbjct: 201 VFGPGTGSFLVFLFVRVFSYDFLSASAAAKFVNVATNLAALCWFGYS------------G 248

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            V     L++   ++  + + TKL+   G  ++   F ++
Sbjct: 249 HVIWQLGLLMAVFNVAGSLVGTKLAMKHGSVFVRKLFLVV 288


>gi|291557550|emb|CBL34667.1| Sulfite exporter TauE/SafE [Eubacterium siraeum V10Sc8a]
          Length = 112

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 7/101 (6%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
            G+GGG +           + +   I   +A G +L    P +++S + H ++   ++K+
Sbjct: 1   MGLGGGFI-------LLVYLSVFTEIPQDIAQGINLLFFLPIALLSLVIHIKNKLTDLKL 53

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +  ++ +     V  S +    D + L K F IF L +GI 
Sbjct: 54  VGKYLILGLPCAVAGSYVAGITDVAVLRKLFGIFVLYIGIN 94


>gi|148263621|ref|YP_001230327.1| hypothetical protein Gura_1558 [Geobacter uraniireducens Rf4]
 gi|146397121|gb|ABQ25754.1| hypothetical protein Gura_1558 [Geobacter uraniireducens Rf4]
          Length = 199

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 6/160 (3%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +  + V     G  SGL GVGGG++M+P+L    QL G    I +  A+G ++ +    
Sbjct: 6   LLINLFVLGMAGGCFSGLLGVGGGIIMLPLLITVPQLAGFP--IGLRPAVGVTMLLSLTG 63

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+   + HR++  +++ +         + ++  ++    V +  +   FA+  +   +L+
Sbjct: 64  SMSGILIHRKYHALDLSLALAVGGSAAVGSLGGAVSSRMVSERLMAILFALMAVTSLLLL 123

Query: 142 LKRDRLYCERKFPDNYVKY----IWGMVTGFLSGALGVGG 177
           L  +    E +      +Y    + G   GFL+G +G GG
Sbjct: 124 LLAEPSGPEIEGSPRPTRYPAAALLGGGVGFLAGIIGQGG 163


>gi|307272263|ref|ZP_07553523.1| hypothetical protein HMPREF9514_01015 [Enterococcus faecalis
           TX0855]
 gi|306511152|gb|EFM80162.1| hypothetical protein HMPREF9514_01015 [Enterococcus faecalis
           TX0855]
          Length = 237

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 92/241 (38%), Gaps = 26/241 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILK 101
           GGG+++ PVL                +A  +S+ V    S+ S  +  ++G  I  K   
Sbjct: 2   GGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFVM-SISSTYKQYQNGVKIEWKKAA 54

Query: 102 DWIFVLPITTVVTSLMISHV-----DKSFLNKA-FAIFCLLMGILMLKRDRLYCERKFPD 155
              F   +  ++  L+++       ++  +    + I  L + +++L             
Sbjct: 55  SISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYIIMLLTLVLVLLYNQFSNWHLHLNG 114

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALL-V 213
             +  I G+  G LS  LG+GGG      L+LF+G  I  AT  S           L  +
Sbjct: 115 LSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMDIKSATVYSIITIFFSQLAKLGNI 174

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            + +G+ +            +  +  I+P ++    +    S  + ++ +   +S+++F 
Sbjct: 175 GLTTGFAVFD----------LTMLWAIIPAALFGGYVGGLFSKKLSQQRVAQIYSLVVFL 224

Query: 274 T 274
            
Sbjct: 225 V 225



 Score = 35.8 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 22/130 (16%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + + ++     G LS   G+GGG + V  L   F        + +  A   S+  I 
Sbjct: 112 LNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFF-------GMDIKSATVYSIITIF 164

Query: 80  PTSVMSFMEHRRHGTI---------NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
            + +       + G I         ++ +L   I        V  L    + +  + + +
Sbjct: 165 FSQLA------KLGNIGLTTGFAVFDLTMLWAIIPAALFGGYVGGLFSKKLSQQRVAQIY 218

Query: 131 AIFCLLMGIL 140
           ++   L+ +L
Sbjct: 219 SLVVFLVILL 228


>gi|300779534|ref|ZP_07089392.1| possible transmembrane protein [Chryseobacterium gleum ATCC 35910]
 gi|300505044|gb|EFK36184.1| possible transmembrane protein [Chryseobacterium gleum ATCC 35910]
          Length = 249

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 50/147 (34%), Gaps = 8/147 (5%)

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           T+L       +     + R+  I+ K +     V      + +++   + +         
Sbjct: 45  TALICNVIVVIGGVFIYIRNKQIDWKKILPLTLVSVPMAYLGAVL--KISQETFFLVLGA 102

Query: 133 FCLLMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
             ++  +L+  +     E           +     G   GFLSG +G+GGGIF + L+  
Sbjct: 103 TLIMAALLLWVKTETKNEENPSKYTKATPFKNGFLGGGIGFLSGLVGIGGGIFLSPLLNL 162

Query: 188 YGAS-IYKATATSAGVSALIAFPALLV 213
                  K  A S+    + +   +  
Sbjct: 163 MKWDTPRKIAAASSVFILVNSISGIFG 189



 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 9/110 (8%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SGL G+GGG+ + P+L+       +       +A  +S+  I   S+          + +
Sbjct: 145 SGLVGIGGGIFLSPLLNL------MKWDTPRKIAAASSVF-ILVNSISGIFGQLSKLSAD 197

Query: 97  MKILKDW--IFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           M   +     F + I   + S M    +   + +  A+  L+ GI +L +
Sbjct: 198 MDYFRIMSLCFAVFIGGQIGSRMSLKWNPLVIKRMTAVLVLVAGINVLIK 247


>gi|297614541|gb|ADI48572.1| putative permease [uncultured bacterium fss6]
          Length = 241

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 104/259 (40%), Gaps = 32/259 (12%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +DYI + ++  F+   L G+ G G GL+ VP+L+    L  I  ++            I 
Sbjct: 1   MDYILITLII-FVGACLQGITGFGSGLIAVPLLTLLLPLSVITPTL-----------SII 48

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ +++       + ++  +  +    I T+  + +++H+   +L    AI  + + +
Sbjct: 49  NFAMATYLAWMLRHAVQVRQWRWLLVTGIIGTLAGNWLLNHIRLDWLQMGMAIMVIAVAL 108

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
           L     +L        + ++ I G++ GF +GAL +GG     +++   G  + +     
Sbjct: 109 LFWFGVQLK---HRSTDGLQGITGLLAGFSNGALTLGG---PPVVLFLTGNGLDR----- 157

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                 IAF A L   +    L  +  +S       A + I+   ++       L + I 
Sbjct: 158 ------IAFRATLTIFFWVLALTNIVSFSFQQRYETAHIPIVICLLIGAISGAWLGHKIS 211

Query: 260 KKYLTIGF---SMIMFTTS 275
            K     F   S+++   +
Sbjct: 212 DKLSEQLFRKLSLLLVMVA 230


>gi|206971682|ref|ZP_03232632.1| putative membrane protein [Bacillus cereus AH1134]
 gi|206733667|gb|EDZ50839.1| putative membrane protein [Bacillus cereus AH1134]
          Length = 223

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 81/213 (38%), Gaps = 16/213 (7%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           VA+ T+    +  ++M+ +   +   IN+K ++  I +    +V    ++  +   +L  
Sbjct: 16  VAIATNKLQGSSGTLMATVFFIKKKEINLKEMRLSILMTFFGSVFGGWLVLQIRAEYLIM 75

Query: 129 AFAIFCLLMGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-L 184
                 + +GI  L    +  E   RK            + GF  G  G G G    L  
Sbjct: 76  ILPFLLVFIGIYFLLSPNIANEDRPRKISMLLFALTVAPLLGFYDGFFGPGTGSLIALAF 135

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +L  G S  +ATA +  ++    F ALL  I  G        W++G       LI++   
Sbjct: 136 ILLCGYSATRATANAKILNFTSNFAALLYFIIFGQ-----IDWTIG-------LIMMLGQ 183

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           I+ + +  K+    G   +     ++ F  +  
Sbjct: 184 IIGSYIGAKMVLTKGTALIRPIVVIVCFVMAIK 216


>gi|22299171|ref|NP_682418.1| hypothetical protein tlr1628 [Thermosynechococcus elongatus BP-1]
 gi|22295353|dbj|BAC09180.1| tlr1628 [Thermosynechococcus elongatus BP-1]
          Length = 295

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 84/253 (33%), Gaps = 50/253 (19%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL      MGI+  + + +    +L ++   S+++ +   R G +N+++   +     +
Sbjct: 31  PVLVYV---MGIETKVAIPM----TLVIVGSVSLLAVIPQWRRGYVNLRLALIFGSATMV 83

Query: 110 TTVVTSLMIS--HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF-------------- 153
              + + + +   +  +     FAI  L+  ILM++R +     +               
Sbjct: 84  GAYLGARLAALPWITDTVQLLLFAIAMLVAAILMIRRQQRPPAPELTPPESSLESQLYAP 143

Query: 154 ----------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
                     P   +          + G   +        L+L     + +A  TS  + 
Sbjct: 144 PICKYCWLWLPTEGLGVGVLTGLVGVGGGFAI-----VPALVLLGKIPMRQAIGTSLLII 198

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            + +  A+   + +      L             L +   +   + + + LS+ +  K L
Sbjct: 199 TINSVAAVWGYLGTVTLDARL------------TLTLTLAAAGGSVVGSYLSHRLSAKRL 246

Query: 264 TIGFSMIMFTTSF 276
             GF   +   + 
Sbjct: 247 QQGFGYFLIGIAA 259



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 42/114 (36%), Gaps = 7/114 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
             +VP L            I M  A+GTSL +I   SV +   +    T++ ++      
Sbjct: 173 FAIVPALVLL-------GKIPMRQAIGTSLLIITINSVAAVWGYLGTVTLDARLTLTLTL 225

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK 159
                +VV S +   +    L + F  F + +   ++ +  L   ++     + 
Sbjct: 226 AAAGGSVVGSYLSHRLSAKRLQQGFGYFLIGIAAFVILKTLLAPPQRSKSPSLL 279


>gi|300703327|ref|YP_003744929.1| hypothetical protein RCFBP_11000 [Ralstonia solanacearum CFBP2957]
 gi|299070990|emb|CBJ42299.1| conserved membrane protein of unknown function, DUF81 [Ralstonia
           solanacearum CFBP2957]
          Length = 273

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 81/246 (32%), Gaps = 34/246 (13%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L+  F   G   +     A+GT L   + T  +  + HR HG I   I+K      
Sbjct: 43  MTPLLTLMF---GFSPA----TAVGTDLAFASLTKGVGTIAHRSHGHIRWDIVKRLCLGS 95

Query: 108 PITTVVTSLM---ISHVDKSFL---NKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI 161
               +VT L+      +D  ++        +  +L  I +L R R+         Y    
Sbjct: 96  LPAALVTVLVLKTAGSLDAQWMHFIRVTIGVSVILTVISLLFRHRVLGWLARNPRYRLQG 155

Query: 162 WGMVTGFLSGAL---------GVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL- 211
             +    +   +          +G G     L+L     +  A                 
Sbjct: 156 SALAVATVIVGVVLGVLVTVSSIGAGAVGATLILILYPELKSA-----------EVAGTD 204

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +        + GL    LG +++  ++ +L  SI    L  +LS  + ++      +  +
Sbjct: 205 IAYAVPLTAVAGLGHMYLGTIDLNLLVSLLVGSIPGIWLGARLSKSLPERLTRGALAATL 264

Query: 272 FTTSFV 277
             T+  
Sbjct: 265 TVTAIK 270


>gi|296141748|ref|YP_003648991.1| hypothetical protein Tpau_4082 [Tsukamurella paurometabola DSM
           20162]
 gi|296029882|gb|ADG80652.1| protein of unknown function DUF81 [Tsukamurella paurometabola DSM
           20162]
          Length = 260

 Score = 47.4 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 85/234 (36%), Gaps = 24/234 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +P L  AF       +  +H+     +  IA T+  S     R    + +    
Sbjct: 28  GGGLIQLPALLIAF-----PTAAPIHLLATNKMASIAGTTTSSI-TFWRRVKPDARTAIA 81

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF-----PDNY 157
                    V  SL+ SH+ ++  N       +++ +  L++  L               
Sbjct: 82  LALPAFAGAVAGSLIASHIPRAAFNPIILAALIVVFVYTLRQPDLGGSTALRFAGHRHLV 141

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIY 216
              I G   G   GALG G G F    M+   G +  +A+A +   +      +L+V + 
Sbjct: 142 AAGIAGFAIGVYDGALGPGTGSFFVFAMVGLMGYAFLEASAKAKVANLATNLASLVVFLP 201

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            G G      W LG       + +   ++    L  + +   G  ++ I F ++
Sbjct: 202 QGAGF-----WKLG-------IAMACANVAGGYLGARTAVAKGSGFVKIVFLVV 243


>gi|330957320|gb|EGH57580.1| hypothetical protein PMA4326_01937 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 270

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 7/138 (5%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +V++  L      + G +  L G GGG++ VP+L     L  ++ +    +A+G + GV 
Sbjct: 1   MVEHQLLGAGLGAIIGVVLALTGAGGGILAVPLLVFGLGLTIVEAAPVGLLAVGLAAGVG 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           A   +       R G +  +       +  +   +   +   +  + L   F+   L   
Sbjct: 61  AVLGL-------RQGIVRYRAAGYIAGIGVLAAPLGLWLAHRLPNAPLALIFSAVLLYAC 113

Query: 139 ILMLKRDRLYCERKFPDN 156
             M  R R       P  
Sbjct: 114 GRMFMRARRELRDGRPAP 131



 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 40/115 (34%), Gaps = 15/115 (13%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G + G +    G GGGI    L++F             G+   I   A +  +  G 
Sbjct: 9   AGLGAIIGVVLALTGAGGGILAVPLLVF-------------GLGLTIVEAAPVGLLAVGL 55

Query: 220 GLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
                    L  G V   A   I  I +L  PL   L++ +    L + FS ++ 
Sbjct: 56  AAGVGAVLGLRQGIVRYRAAGYIAGIGVLAAPLGLWLAHRLPNAPLALIFSAVLL 110



 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 40/99 (40%), Gaps = 7/99 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V++P L++          + M   + TSL VIA  S  S +     G ++  +   +  
Sbjct: 177 FVIIPALTRY-------SDLDMKSVVATSLAVIALVSAGSVITASLSGVMHWSVGAPFAC 229

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              +  +    +  ++    + + FA+  ++  ++++  
Sbjct: 230 GAVLGLISGRQIACYLAGPRVQQLFAVCGIVAALMLVFS 268


>gi|308062003|gb|ADO03891.1| hypothetical protein HPCU_03645 [Helicobacter pylori Cuz20]
          Length = 255

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 73/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  +A
Sbjct: 1   MDIYALYIAIGLFTGILSGIFGI--------GGGMIIVPIMLATGHSFEESIGISILQMA 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFVLKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDFIADTKRYHLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       IY 
Sbjct: 173 KCVALGLFFILFSSISGTFSLIYH 196


>gi|260893640|ref|YP_003239737.1| protein of unknown function DUF81 [Ammonifex degensii KC4]
 gi|260865781|gb|ACX52887.1| protein of unknown function DUF81 [Ammonifex degensii KC4]
          Length = 356

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 94/271 (34%), Gaps = 57/271 (21%)

Query: 41  GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKIL 100
           G GG  V+ P +        +   +   VA+ +++    P +++  M+  + G +++ + 
Sbjct: 32  GSGGAFVLTPGM--------MSAGVPGAVAVASNMCHKFPKALVGAMKRAKLGHVDVFLG 83

Query: 101 KDWIFVLPITTVVTSLMISHVDKSF--------LNKAFAIFCLLMGILMLKRD------- 145
                       V   +   +++ +        ++  F +  L +G+++L+         
Sbjct: 84  LVMGLSATAGVQVGVKIQKWINQVWGTAGSNLYVSTIFVLVLLTVGLIVLRDAYRSKNQQ 143

Query: 146 ----------------------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
                                      +     ++    G  TG L+  + VGG I    
Sbjct: 144 VVVAEPGKLAQKVQKLRIPPMLNFPVAKSKVSFWITVPLGFATGLLAATIAVGGFIGVPA 203

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +M   GAS + A+ T   ++ ++     L   YS            G+V++   L+IL  
Sbjct: 204 MMYILGASSFVASGTELVIAFIMGLTGTLSWAYS------------GYVDLRLALLILFG 251

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           S+    L    +  +    + +  +++M   
Sbjct: 252 SLFGVQLGAIGTSYVKDYMIKLVMALVMLIV 282


>gi|225017186|ref|ZP_03706378.1| hypothetical protein CLOSTMETH_01112 [Clostridium methylpentosum
           DSM 5476]
 gi|224950105|gb|EEG31314.1| hypothetical protein CLOSTMETH_01112 [Clostridium methylpentosum
           DSM 5476]
          Length = 133

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 37/84 (44%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
            ++    A G +L    P + +S   H ++G ++   L   +       V  + +   + 
Sbjct: 35  ANVDQMQAQGMNLLFFLPIAALSLWLHAKNGLVDKAPLWPAVLTGIAGAVAGAFIAFGIQ 94

Query: 123 KSFLNKAFAIFCLLMGILMLKRDR 146
             +L+K FA+F L++G+  L   +
Sbjct: 95  THWLSKLFAVFILIIGVKELFFQK 118


>gi|219112381|ref|XP_002177942.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410827|gb|EEC50756.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 644

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 13/123 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  V   ++G  +G+FGVGGG+V  P++      MG+  +    V+  +S  +I  TS 
Sbjct: 506 IVYPVVCCMAGFFAGMFGVGGGIVKGPLML----AMGVHPA----VSSASSACMILFTSF 557

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-----DKSFLNKAFAIFCLLMG 138
            +       G +        + +  + T    + +S++       S++  +     LL  
Sbjct: 558 TATTSFVVFGLLVWDYAYVCMAIGFVATFAGQVGLSYLMRRAQRNSYIAFSIGAVVLLSA 617

Query: 139 ILM 141
            LM
Sbjct: 618 FLM 620



 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 26/53 (49%)

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           GF +G  GVGGGI    LML  G     ++A+SA +    +F A    +  G 
Sbjct: 516 GFFAGMFGVGGGIVKGPLMLAMGVHPAVSSASSACMILFTSFTATTSFVVFGL 568


>gi|261211487|ref|ZP_05925775.1| membrane protein [Vibrio sp. RC341]
 gi|260839442|gb|EEX66068.1| membrane protein [Vibrio sp. RC341]
          Length = 261

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 69/189 (36%), Gaps = 16/189 (8%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+    +  S  + +   R G +++K ++  I    +   + +  + ++D + L   
Sbjct: 46  ALATNKLQSSFGSFSATLYFVRKGVVSLKAMRLAIACTFVGAALGAEAVQYIDATLLTSL 105

Query: 130 FAIFCLLMGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLM 185
             +  L + +  L               +    +  G   GF  G  G G G IFT   +
Sbjct: 106 IPLLLLGISLYFLLAPTTKTHAGPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIFTVCFV 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                S+ +ATA +  ++      AL   + +G     LP W +G       L +     
Sbjct: 166 ALGHFSLVEATARTKVLNFTSNIAALTFFLIAG-----LPIWQIG-------LTMAVGGF 213

Query: 246 LITPLATKL 254
           +   +  K+
Sbjct: 214 IGARMGAKV 222


>gi|226939083|ref|YP_002794154.1| hypothetical protein LHK_00149 [Laribacter hongkongensis HLHK9]
 gi|226714007|gb|ACO73145.1| DUF81 domain containing protein [Laribacter hongkongensis HLHK9]
          Length = 254

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 79/269 (29%), Gaps = 39/269 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +   +F++G +S   G GGGLV++P L  A+ L+           +GT+  V   +  
Sbjct: 6   LYLAFLAFVAGLVSSSVG-GGGLVLIPALFNAYPLL------PSATVLGTNRLVFGMSGA 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +     RH      +L   +          S ++      +      +  + + I   +
Sbjct: 59  SNVWRVLRHTRPPWPVLWPALVTGIPMAAAGSALLMAFPPHWYKPVLLVVMIALAIHTWR 118

Query: 144 RDRLYCERKFPD--------------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
              L      P                    ++    G  S +            +  +G
Sbjct: 119 HPALGQNATAPRLHTSAHQQLGSAGAGAAAGLYLGFIGPASQSF------LLLGFVHLFG 172

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
               +A+  +  V   +   +LL  I                V     L +   S+    
Sbjct: 173 FDFRRASECAQIVVNGLNLASLLWFIAFS------------HVVFPIGLAMGACSVAGAV 220

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           L ++L    G + +   F  ++      F
Sbjct: 221 LGSRLIRKGGNRLIRRLFLGLLVIEIGRF 249


>gi|167627996|ref|YP_001678496.1| hypothetical protein Fphi_1769 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597997|gb|ABZ87995.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 280

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 80/259 (30%), Gaps = 43/259 (16%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM-SFMEHRRHGTINMKILKDWIF 105
           V+ P+LS           + +H A+G SL  I  TS   S +  + HG    K+      
Sbjct: 32  VITPLLSTIL-------DVPLHYAIGASLVAIICTSTATSLVSLKSHGLTKEKLGMFLAL 84

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY----- 160
              I  +  + +   +    L   F     ++ +L   + +     +             
Sbjct: 85  ATAIGAIFGAKLALTLKSQALFLIFGGILFVVAVLSFVKKKQNSTIQESTKISVIAEKLQ 144

Query: 161 -------------------IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
                              I G +  F+S       G      +L  GA I+K  A    
Sbjct: 145 LNDSITVNKLKQQYNVRHPILGFI--FMS-------GAGFIGGLLGIGAGIFKVIAMDKV 195

Query: 202 VSALIAFPALLVRIYSGWGLNGLPP--WSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +       A       G          +  G+++      +   ++L   + +K+   I 
Sbjct: 196 MKIPFKVSASTSNFIMGITAFAATSTYYFAGYIDSSITAPVALGTLLGATIGSKIMPHIS 255

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            + L + F +++F ++   
Sbjct: 256 TRVLRLTFFIVLFISALQM 274



 Score = 43.1 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I   V+  TS  ++  T+  +   +   G I+  I         +   + S ++ H+   
Sbjct: 198 IPFKVSASTSNFIMGITAFAATSTYYFAGYIDSSITAPVALGTLLGATIGSKIMPHISTR 257

Query: 125 FLNKAFAIFCLLMGILMLKR 144
            L   F I   +  + M+ +
Sbjct: 258 VLRLTFFIVLFISALQMIIK 277


>gi|145294262|ref|YP_001137083.1| hypothetical protein cgR_0218 [Corynebacterium glutamicum R]
 gi|140844182|dbj|BAF53181.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 260

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 94/235 (40%), Gaps = 25/235 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++I  + ++G +  + G GGGLV++P++            +    A+ ++       +  
Sbjct: 12  ILIAGAAVAGWIDAVIG-GGGLVLIPLILAVM------PQLAPVTALASNKLAAVTGTAS 64

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +     R    + K+L  ++ V  + +   +L  S +DK  +     +  L++G++++ +
Sbjct: 65  AAFTLVRRVKPDKKLLPLYVLVAAVCSGAGALAASLIDKQIMRPMIIVLMLVVGLIVVFK 124

Query: 145 DRLYC--ERKFPDNYVKYIWGMVTGFLS---GALGVGGGIFTNL-LMLFYGASIYKATAT 198
                   +  P  + ++   +  GF++   G  G G G+F  +        +   + A 
Sbjct: 125 PNFGTGESKTLPTGWKRWAAIVAVGFIAAYDGIFGPGTGMFLIMAFTALLSQNFLSSAAM 184

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +  V+      AL+V I  G        W+LG       L++   ++    L  +
Sbjct: 185 AKVVNTATNLGALIVFIIGGHM-----WWTLG-------LVLAVANVAGAQLGAR 227


>gi|329121785|ref|ZP_08250401.1| membrane protein [Dialister micraerophilus DSM 19965]
 gi|327468058|gb|EGF13546.1| membrane protein [Dialister micraerophilus DSM 19965]
          Length = 253

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 76/199 (38%), Gaps = 14/199 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I    F++G +  + G GGGL+ +P          I   + +H A+ T+    +  ++
Sbjct: 8   LFICTLVFIAGFIDAVAG-GGGLISIPA--------YIVSGVPVHAAIATNKMSSSMGTL 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +  +  R G I  K+    +    I ++  + +   +D         +   + G+ +L+
Sbjct: 59  WATYKFSRDGYIPWKLALSCVVFAFIGSIFGANIALAIDARTFLFCMLVLIPITGLYVLR 118

Query: 144 RDRLYCERKF----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
              L  E+          +  +   + G   G  G G G F  L++      S+ +A   
Sbjct: 119 SKSLIKEKIPFSFSKTAILSIVTSSLIGVYDGFYGPGTGTFLILILTGVSHVSLKQANGI 178

Query: 199 SAGVSALIAFPALLVRIYS 217
           +  +++     AL V + +
Sbjct: 179 TKVINSTTNLAALSVFLLN 197


>gi|260892100|ref|YP_003238197.1| protein of unknown function DUF81 [Ammonifex degensii KC4]
 gi|260864241|gb|ACX51347.1| protein of unknown function DUF81 [Ammonifex degensii KC4]
          Length = 311

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G ++G+FG+G G   VPVL+             + +A+GTS  +++ T   + 
Sbjct: 195 LILFIFIGFIAGMFGLGAGWANVPVLNLVMGA-------PLKIAVGTSKFLLSITDTSAA 247

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +   G     I+   +  + + + +   +++ V    +     +  ++ GI  L +
Sbjct: 248 WVYLNSGACLPMIVVPSVVGIMLGSFIGVKLLTIVRPKAVRYVVILLMIVAGIRPLLQ 305


>gi|317010896|gb|ADU84643.1| hypothetical protein HPSA_03220 [Helicobacter pylori SouthAfrica7]
          Length = 255

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 72/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  +A
Sbjct: 1   MDIYGLYITIGLFTGILSGIFGI--------GGGMIIVPIMLATGHSFEESIGISILQMA 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         +    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLVGASFSGFILKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +         ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFILKPKKKDAVADIKHHHLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       +Y 
Sbjct: 173 KCVALGLFFILFSSISGAFSLMYH 196


>gi|330982658|gb|EGH80761.1| hypothetical protein PSYAP_29628 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 143

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 15/115 (13%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G V G +    G GGGI    L++F             G+   I   A +  +  G 
Sbjct: 9   VGLGTVIGMVLALTGAGGGILAVPLLVF-------------GLGLSIVEAAPVGLLAVGL 55

Query: 220 GLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
                    L  G V   A   I  I +L+ PL   L++ +    L + FS+++ 
Sbjct: 56  AAGIGAVLGLRQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLL 110



 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 7/136 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++  L +    + G +  L G GGG++ VP+L     L  ++ +    +A+G + G+ A 
Sbjct: 3   EHQLLGVGLGTVIGMVLALTGAGGGILAVPLLVFGLGLSIVEAAPVGLLAVGLAAGIGAV 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +       R G +  +       +  +   +   +   +  + L   F++  L     
Sbjct: 63  LGL-------RQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACGR 115

Query: 141 MLKRDRLYCERKFPDN 156
           M  R         P  
Sbjct: 116 MFIRASRELRHGKPAP 131


>gi|308182834|ref|YP_003926961.1| hypothetical protein HPPC_03405 [Helicobacter pylori PeCan4]
 gi|308065019|gb|ADO06911.1| hypothetical protein HPPC_03405 [Helicobacter pylori PeCan4]
          Length = 255

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 72/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  + 
Sbjct: 1   MDIYALYIAIGLFTGILSGIFGI--------GGGMIIVPIMLATGHSFEESIGISILQMV 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFILKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDFIANTKRYHLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       IY 
Sbjct: 173 KCVALGLFFILFSSISGAFSLIYH 196


>gi|307290632|ref|ZP_07570540.1| hypothetical protein HMPREF9509_00930 [Enterococcus faecalis
           TX0411]
 gi|306498346|gb|EFM67855.1| hypothetical protein HMPREF9509_00930 [Enterococcus faecalis
           TX0411]
          Length = 237

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 90/240 (37%), Gaps = 24/240 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILK 101
           GGG+++ PVL                +A  +S+ V    S+ S  +  ++G  I  K   
Sbjct: 2   GGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFVM-SISSTYKQYQNGVQIEWKKAA 54

Query: 102 DWIFVLPITTVVTSLMISHV-----DKSFLNKA-FAIFCLLMGILMLKRDRLYCERKFPD 155
              F   +  ++  L+++       ++  +    + I  L + +++L             
Sbjct: 55  SISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYIIMLLTLVLVLLYNQFSNWHLHLNG 114

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVR 214
             +  I G+  G LS  LG+GGG      L+LF+G  I  AT  S            L  
Sbjct: 115 LSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMDIKSATVYSIITIFFSQLA-KLGN 173

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           I    G+           ++  +  I+P ++    +    S  + ++ +   +S+++F  
Sbjct: 174 IGLTTGVAVF--------DLTMLWAIIPAALFGGYVGGLFSKKLSQQRVAQIYSLVVFLV 225



 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 45/124 (36%), Gaps = 10/124 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + + ++     G LS   G+GGG + V  L   F        + +  A   S+  I 
Sbjct: 112 LNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFF-------GMDIKSATVYSIITIF 164

Query: 80  PTSVMSFMEHRRHGTI---NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            + +           +   ++ +L   I        V  L    + +  + + +++   L
Sbjct: 165 FSQLAKLGNIGLTTGVAVFDLTMLWAIIPAALFGGYVGGLFSKKLSQQRVAQIYSLVVFL 224

Query: 137 MGIL 140
           + +L
Sbjct: 225 VILL 228


>gi|302188158|ref|ZP_07264831.1| hypothetical protein Psyrps6_17513 [Pseudomonas syringae pv.
           syringae 642]
          Length = 270

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 15/115 (13%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G V G +    G GGGI    L++F             G+   I   A +  +  G 
Sbjct: 9   VGLGAVIGMVLALTGAGGGILAVPLLVF-------------GLGLSIVEAAPVGLLAVGL 55

Query: 220 GLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
                    L  G V   A   I  + +L+ PL   L++ +    L + FS+++ 
Sbjct: 56  AAGIGAVLGLRQGIVRYRAAGYIASVGVLMAPLGLWLAHRLPNTPLALVFSVVLL 110



 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 7/101 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V++P L++          + M   + TSL VIA  S  S +     G ++  +   +  
Sbjct: 177 FVIIPALTRY-------SDLDMKSVVATSLAVIALVSTGSVITASLSGVMHWAVGAPFAL 229

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
              I  +V   +  ++    L + FA+  ++   ++    R
Sbjct: 230 GAVIGLIVGRQVARYLAGPRLQQLFAVCGIVAAFMLALSVR 270



 Score = 43.9 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 7/136 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++  L +    + G +  L G GGG++ VP+L     L  ++ +    +A+G + G+ A 
Sbjct: 3   EHQLLGVGLGAVIGMVLALTGAGGGILAVPLLVFGLGLSIVEAAPVGLLAVGLAAGIGAV 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +       R G +  +       V  +   +   +   +  + L   F++  L     
Sbjct: 63  LGL-------RQGIVRYRAAGYIASVGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACGR 115

Query: 141 MLKRDRLYCERKFPDN 156
           M  R         P  
Sbjct: 116 MFIRASRELRHGKPAP 131


>gi|124009606|ref|ZP_01694279.1| domain of unknown function, putative [Microscilla marina ATCC
           23134]
 gi|123984747|gb|EAY24727.1| domain of unknown function, putative [Microscilla marina ATCC
           23134]
          Length = 263

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 83/203 (40%), Gaps = 21/203 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
               +I+ S L+G ++ L G G  L+M+P+L        +   +  ++A GT+       
Sbjct: 2   IYVFLIIGSILTGFINTLAGSG-SLIMLPLL--------MAAGLPANIANGTNRVATLVQ 52

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S++      R+  I++K  +  I V  +     + + +  D +FL +      ++M  ++
Sbjct: 53  SIVGVGTFVRNKKIDIKDSQLPIGVCVVGAFFGAFIATRTDPAFLKQFIKYLMIVMFFVI 112

Query: 142 LKRDR---------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           L + +             +      + +  G+  GF+   +G+   I   +L+L    S+
Sbjct: 113 LVKPKRWFKEADIASNKHKHPLTLVLLFFAGVYAGFIQAGIGI---ILLAILVLRADFSL 169

Query: 193 YKATATSAGVSALIAFPALLVRI 215
             A      V  + A P L++ +
Sbjct: 170 PYANFVKLVVVLVYALPVLIIFV 192


>gi|66043351|ref|YP_233192.1| hypothetical protein Psyr_0080 [Pseudomonas syringae pv. syringae
           B728a]
 gi|63254058|gb|AAY35154.1| Protein of unknown function DUF81 [Pseudomonas syringae pv.
           syringae B728a]
          Length = 270

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 41/115 (35%), Gaps = 15/115 (13%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G V G +    G GGGI    L++F             G+   I   A +  +  G 
Sbjct: 9   VGLGTVIGMVLALTGAGGGILAVPLLVF-------------GLGLSIVEAAPVGLLAVGL 55

Query: 220 GLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
                    L  G V   A   I  I +L+ PL   L++ +    L + FS ++ 
Sbjct: 56  AAGIGAVLGLRQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSAVLL 110



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 41/101 (40%), Gaps = 7/101 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V++P L++          + M   + TSL VIA  S+ S +     G ++  +   +  
Sbjct: 177 FVIIPALTRY-------SDLDMKSVVATSLAVIALVSMGSVITASLSGVMHWAVGAPFAL 229

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
              I  ++   +  ++    L + FA+  ++   ++    R
Sbjct: 230 GAVIGLIIGRQVARYLAGPRLQQLFAVCGIVAAFMLALSVR 270



 Score = 43.5 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 92/284 (32%), Gaps = 45/284 (15%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++  L +    + G +  L G GGG++ VP+L     L  ++ +    +A+G + G+ A 
Sbjct: 3   EHQLLGVGLGTVIGMVLALTGAGGGILAVPLLVFGLGLSIVEAAPVGLLAVGLAAGIGAV 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +       R G +  +       +  +   +   +   +  + L   F+   L     
Sbjct: 63  LGL-------RQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSAVLLYACGR 115

Query: 141 MLKRDRLYCERKFPD------------------------NYVKYIWGMVTGFLSGALGVG 176
           M  R       + P                           +                 G
Sbjct: 116 MFIRASRELRHEKPAPRAEILPCVLNPLQGRLRWTMPCLRALTLTGVGSGLLSGLLGVGG 175

Query: 177 GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG-WGLNGLPPWSLGFVNIG 235
           G +    L  +    +    ATS  V AL++  +++    SG        P++LG     
Sbjct: 176 GFVIIPALTRYSDLDMKSVVATSLAVIALVSMGSVITASLSGVMHWAVGAPFALG----- 230

Query: 236 AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           AV+ ++        +  +++  +    L   F++     +F+ A
Sbjct: 231 AVIGLI--------IGRQVARYLAGPRLQQLFAVCGIVAAFMLA 266


>gi|11499708|ref|NP_070950.1| hypothetical protein AF2125 [Archaeoglobus fulgidus DSM 4304]
 gi|2648399|gb|AAB89123.1| conserved hypothetical transmembrane protein [Archaeoglobus
           fulgidus DSM 4304]
          Length = 325

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/249 (11%), Positives = 50/249 (20%), Gaps = 61/249 (24%)

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL-MISHVDKSFLNKAFAIFCLLMG 138
             +V S         +             I   V        V  S     F +   L+ 
Sbjct: 76  FNAVSSTYNWYTQKRLVWPAGVALGLGAVIGAQVGVWGTGGQVAPSMYKGLFGLATYLIA 135

Query: 139 ILMLKRDRLYCERKFP-------------------------------------------- 154
             M  +     +                                                
Sbjct: 136 GYMFYQLTPRAKAGKKAGREAAQRFQQKVKELRESGRLHELEGIKNLKVGLSETTFEFFG 195

Query: 155 -----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
                 N+  +I G + G  S  +G+GGG      +   G   Y     S          
Sbjct: 196 ESFRVKNFAPFIVGFLIGLFSAVIGIGGGFLFVPFLTSLGLPFYVVPGASTLAVFFTQTS 255

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            +L  +  G             + +     I   S     +  +    I +  L   F +
Sbjct: 256 TVLGWLARGVMYPVA-------LIVAGWAGIFIGSY----IGPRTQKYIPQDALFALFGI 304

Query: 270 IMFTTSFVF 278
           +       +
Sbjct: 305 LALYVGTRY 313



 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 9/119 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +  FL G  S + G+GGG + VP L+           +  +V  G S   +  T   + 
Sbjct: 206 FIVGFLIGLFSAVIGIGGGFLFVPFLTSL--------GLPFYVVPGASTLAVFFTQTSTV 257

Query: 87  MEHRRHGTI-NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +     G +  + ++      + I + +      ++ +  L   F I  L +G   +  
Sbjct: 258 LGWLARGVMYPVALIVAGWAGIFIGSYIGPRTQKYIPQDALFALFGILALYVGTRYVLS 316


>gi|327482448|gb|AEA85758.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 262

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 52/273 (19%), Positives = 92/273 (33%), Gaps = 40/273 (14%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +IVA F  G L GL GVGGG +M PVL   F            VA+ T L   A T    
Sbjct: 5   LIVAGFGVGALVGLTGVGGGALMTPVLVLLF-------GYAPGVAVATDLLFAAVTKTCG 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH-------VDKSFLNKAFAIFCLLMG 138
              H R  TI+  +L+  +       ++  + +++            +    A   LL  
Sbjct: 58  VAVHYRADTIDTLVLRRLLLGSLPAALLVGIGLAYCGDGTAGALDPLMRDTLAWLLLLSA 117

Query: 139 ILMLKRDRLYCERKFPDN-----------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
           + +  R  L+                    +    G   G       VG G    +++L+
Sbjct: 118 VGIFCRKWLHRLGSLLRTERAEQFKRWQEGLTVAAGAFIGVCVSLTSVGAGALGAVVLLY 177

Query: 188 ---YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
              +     +  AT    +  +A             +     W +G ++   + I+L  S
Sbjct: 178 LYPFRLQGVRLVATDLAHAIPLAL------------VAAGVHWFIGTIDWVLLGILLTGS 225

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           I    +   LS  +  ++L +    ++  +   
Sbjct: 226 IPGVLIGVWLSRRLALQWLNLAIGCLLIVSGLK 258



 Score = 42.4 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 9/120 (7%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKA--FQLMGIDDSICMHVAMGTSLGVIAPTS 82
           L + A    G    L  VG G +   VL     F+L G+         + T L    P +
Sbjct: 148 LTVAAGAFIGVCVSLTSVGAGALGAVVLLYLYPFRLQGVRL-------VATDLAHAIPLA 200

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++   H   GTI+  +L   +       ++   +   +   +LN A     ++ G+ +L
Sbjct: 201 LVAAGVHWFIGTIDWVLLGILLTGSIPGVLIGVWLSRRLALQWLNLAIGCLLIVSGLKLL 260


>gi|148545327|ref|YP_001265429.1| hypothetical protein Pput_0070 [Pseudomonas putida F1]
 gi|148509385|gb|ABQ76245.1| protein of unknown function DUF81 [Pseudomonas putida F1]
          Length = 272

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 11/118 (9%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G + G +    G GGGI    L++F             G+S + A P  L+ +    
Sbjct: 9   AGLGAIIGAVLALTGAGGGILAVPLLVF-----------GLGLSMVEAAPVGLLAVGLAA 57

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            +  +     G V   A L I  + +   P    L++ +    L + F+ ++      
Sbjct: 58  AVGAVLGLRQGLVRYRAALFIALVGVAAAPFGLMLAHRLPNAPLQVVFAGVLVYACLR 115



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 44/126 (34%), Gaps = 7/126 (5%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++++  L      + G +  L G GGG++ VP+L            + M  A    L  +
Sbjct: 1   MIEHQLLGAGLGAIIGAVLALTGAGGGILAVPLLVFGL-------GLSMVEAAPVGLLAV 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              + +  +   R G +  +       V         ++   +  + L   FA   +   
Sbjct: 54  GLAAAVGAVLGLRQGLVRYRAALFIALVGVAAAPFGLMLAHRLPNAPLQVVFAGVLVYAC 113

Query: 139 ILMLKR 144
           + + ++
Sbjct: 114 LRIWRK 119



 Score = 35.4 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 30/78 (38%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +    ++ M   + TSL VIA  S  S +     G ++ ++   +     +  +
Sbjct: 177 FVIIPALNRYTNLRMASIVSTSLAVIALVSTGSVVSASLAGVMHWQVGAPFAVGAVLGLL 236

Query: 113 VTSLMISHVDKSFLNKAF 130
           ++  + + +    L + F
Sbjct: 237 LSRPLAARLAGPRLQQMF 254


>gi|145588983|ref|YP_001155580.1| hypothetical protein Pnuc_0798 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047389|gb|ABP34016.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 269

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 83/280 (29%), Gaps = 42/280 (15%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + +        G L GL G GGG++ VP+L  AF        + M  A   +L  IA
Sbjct: 1   MDSLFIASALGAFVGILMGLTGAGGGILSVPLLVFAFH-------MPMSEAGPIALTAIA 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            ++ +  +       +  K          I + +   +      + +   F+   + +  
Sbjct: 54  ISAGVGAVIGLNAKVLRYKAAMFMAICGLILSPLGLWVAQRAPNTPMLLLFSAVLIYVAA 113

Query: 140 LMLKRDRLYCERKFPD-----------------------NYVKYIWGMVTGFLSGALGVG 176
            M  +       K P+                         +                 G
Sbjct: 114 KMFVQATQTIAGKAPELTKPPPCQLDMSIGKLIWTVPCARSLMLAGAFAGFLSGLLGVGG 173

Query: 177 GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G I    L  F    +    ATS GV A+++     V + SG             +++  
Sbjct: 174 GFIIVPSLKKFTDLPMKAIVATSLGVLAIVSAGGAAVSLVSGT------------LDLTI 221

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                  S++   +   L   I    +   FS+  F  + 
Sbjct: 222 AAPFAVGSLVGLLIGKVLEKNISGPRVQQIFSVFTFLVAL 261



 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 37/81 (45%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + M   + TSLGV+A  S          GT+++ I   +     +  ++  ++  ++  
Sbjct: 186 DLPMKAIVATSLGVLAIVSAGGAAVSLVSGTLDLTIAAPFAVGSLVGLLIGKVLEKNISG 245

Query: 124 SFLNKAFAIFCLLMGILMLKR 144
             + + F++F  L+ + ++ +
Sbjct: 246 PRVQQIFSVFTFLVALSLIYK 266


>gi|315166238|gb|EFU10255.1| conserved hypothetical protein [Enterococcus faecalis TX1302]
          Length = 237

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 90/240 (37%), Gaps = 24/240 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILK 101
           GGG+++ PVL                +A  +S+ V    S+ S  +  ++G  I  K   
Sbjct: 2   GGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFVM-SISSTYKQYQNGVQIEWKKAA 54

Query: 102 DWIFVLPITTVVTSLMISHV-----DKSFLNKA-FAIFCLLMGILMLKRDRLYCERKFPD 155
              F   +  ++  L+++       ++  +    + I  L + +++L             
Sbjct: 55  SISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYIIMLLTLVLVLLYNQFSNWHLHLNG 114

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVR 214
             +  I G+  G LS  LG+GGG      L+LF+G  I  AT  S            L  
Sbjct: 115 LSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMDIKSATVYSIITIFFSQLA-KLGN 173

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           I    G+           ++  +  I+P ++    +    S  + ++ +   +S+++F  
Sbjct: 174 IGLTTGVAVF--------DLTMLWAIIPAALFGGYVGGLFSKKLSQQRVAQIYSLVVFLV 225



 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 45/124 (36%), Gaps = 10/124 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + + ++     G LS   G+GGG + V  L   F        + +  A   S+  I 
Sbjct: 112 LNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFF-------GMDIKSATVYSIITIF 164

Query: 80  PTSVMSFMEHRRHGTI---NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            + +           +   ++ +L   I        V  L    + +  + + +++   L
Sbjct: 165 FSQLAKLGNIGLTTGVAVFDLTMLWAIIPAALFGGYVGGLFSKKLSQQRVAQIYSLVVFL 224

Query: 137 MGIL 140
           + +L
Sbjct: 225 VILL 228


>gi|307282810|ref|ZP_07563010.1| hypothetical protein HMPREF9515_01964 [Enterococcus faecalis
           TX0860]
 gi|306503666|gb|EFM72897.1| hypothetical protein HMPREF9515_01964 [Enterococcus faecalis
           TX0860]
          Length = 237

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 90/240 (37%), Gaps = 24/240 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILK 101
           GGG+++ PVL                +A  +S+ V    S+ S  +  ++G  I  K   
Sbjct: 2   GGGVIIKPVLDFL------GFHSLNSIAFYSSVAVFVM-SISSTYKQYQNGVQIEWKKAA 54

Query: 102 DWIFVLPITTVVTSLMISHV-----DKSFLNKA-FAIFCLLMGILMLKRDRLYCERKFPD 155
              F   +  ++  L+++       ++  +    + I  L + +++L             
Sbjct: 55  SISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYIIMLLTLVLVLLYNQFSNWHLHLNG 114

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVR 214
             +  I G+  G LS  LG+GGG      L+LF+G  I  AT  S            L  
Sbjct: 115 LSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMDIKSATVYSIITIFFSQLA-KLGN 173

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           I    G+           ++  +  I+P ++    +    S  + ++ +   +++++F  
Sbjct: 174 IGLTTGVAVF--------DLTMLWAIIPAALFGGYVGGLFSKKLSQQRVAQIYNLVVFLV 225



 Score = 35.8 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 10/124 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + + ++     G LS   G+GGG + V  L   F        + +  A   S+  I 
Sbjct: 112 LNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFF-------GMDIKSATVYSIITIF 164

Query: 80  PTSVMSFMEHRRHGTI---NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            + +           +   ++ +L   I        V  L    + +  + + + +   L
Sbjct: 165 FSQLAKLGNIGLTTGVAVFDLTMLWAIIPAALFGGYVGGLFSKKLSQQRVAQIYNLVVFL 224

Query: 137 MGIL 140
           + +L
Sbjct: 225 VILL 228


>gi|317012489|gb|ADU83097.1| hypothetical protein HPLT_03375 [Helicobacter pylori Lithuania75]
          Length = 255

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 72/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  +A
Sbjct: 1   MDIYALYIAIGLFTGILSGIFGI--------GGGLIIVPIMLATGHSFEESIGISILQMA 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         +    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLVGASFSGFVLKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +         R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDFIADTRRYHLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       +Y 
Sbjct: 173 KCVALGLFFILFSSISGAFSLMYH 196


>gi|307941472|ref|ZP_07656827.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
 gi|307775080|gb|EFO34286.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
          Length = 309

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 8/100 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++      G L  + G+GGG +MVP L    +       +   + +GTSL  I  T   +
Sbjct: 178 VLGLGASIGFLGTVLGIGGGFMMVPALIYLLR-------VPTGIVIGTSLFQIMFTMAAA 230

Query: 86  FMEHRRH-GTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
            + H     T+++ +    +    I   + + M   +   
Sbjct: 231 TIFHAASTQTVDIVLALTLMIGGVIGAQLGARMGQKLRGD 270



 Score = 39.3 bits (91), Expect = 0.62,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 93/286 (32%), Gaps = 56/286 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   I LI+      G LSGLFG+GGG ++ P+L            I   V
Sbjct: 1   MQLYLPIAEIPVNIFLILGMGGAVGFLSGLFGIGGGFLLTPLLIF--------SGIPPAV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           ++ T    +  +S  + + + R   I+MK+    +      +++  ++   +        
Sbjct: 53  SVATVTTQVVASSASAVVTYIRRKAIDMKLASYLLAGGVTGSLLGVILFDLLQSLGQLDV 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            ++ ++  F   +G LML                                + R    + +
Sbjct: 113 VISLSYVTFLSTVGTLMLVESIKAIRRRHSGAAVSVKRPGQHNWIHGLPFKVRFRRSKLY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G   GFL   LG+GGG      +++           TS          A +
Sbjct: 173 VSAIPVLGLGASIGFLGTVLGIGGGFMMVPALIYLLRVPTGIVIGTSLFQIMFTMAAATI 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
               S              V+I   L ++   ++   L  ++   +
Sbjct: 233 FHAASTQT-----------VDIVLALTLMIGGVIGAQLGARMGQKL 267


>gi|218509527|ref|ZP_03507405.1| hypothetical conserved membrane protein [Rhizobium etli Brasil 5]
          Length = 196

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 60/193 (31%), Gaps = 16/193 (8%)

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
           + R G + +        +  +   + + + + V    L     +  L + I    +  L 
Sbjct: 1   YARKGHVQLHEQLPMALMAVMGGAIGAALATIVPGQVLQAIMPVLLLAIAIFFAVKPNLN 60

Query: 149 ---CERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSA 204
                R               GF  G  G G G  F    +   G  + KATA +  ++ 
Sbjct: 61  DLDKHRIITPFVFGLTLVPAIGFYDGVFGPGTGSFFMLAFVSLAGFGVLKATAHTKLLNF 120

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
                AL+V              S G +     L++     L   L ++L+  IG K + 
Sbjct: 121 GSNLGALIVFA------------SFGAILWKIGLLMGICQFLGAQLGSRLAMRIGAKLIK 168

Query: 265 IGFSMIMFTTSFV 277
               ++    +  
Sbjct: 169 PLLVIVCVALAVK 181


>gi|296503033|ref|YP_003664733.1| hypothetical protein BMB171_C2201 [Bacillus thuringiensis BMB171]
 gi|296324085|gb|ADH07013.1| hypothetical protein BMB171_C2201 [Bacillus thuringiensis BMB171]
          Length = 223

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 82/213 (38%), Gaps = 16/213 (7%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           VA+ T+    +  ++M+ +   +   IN+K ++  I +  + +V    ++  +   +L  
Sbjct: 16  VAIATNKLQGSSGTLMATVFFIKKKEINLKEMRLSILMTFLGSVFGGWLVLQIRAEYLIM 75

Query: 129 AFAIFCLLMGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-L 184
                 +++G+  L    +  E   RK              GF  G  G G G    L  
Sbjct: 76  ILPFLLIIIGLYFLLSPNIANEDRPRKISMLLFALTVAPFLGFYDGFFGPGTGSLIALAF 135

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +L  G S  +ATA +  ++    F ALL  I  G        W++G       LI++   
Sbjct: 136 ILLCGYSATRATANAKILNFTSNFAALLYFIIFGQ-----IDWTIG-------LIMMLGQ 183

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           I+ + +  K+    G   +     ++ F  +  
Sbjct: 184 IIGSYIGAKMVLTKGTSLIRPIVVIVCFVMAIK 216


>gi|315425233|dbj|BAJ46902.1| hypothetical conserved protein [Candidatus Caldiarchaeum
           subterraneum]
          Length = 275

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F++G  +G+ G+G G   V V     +       +   V+  TS  +I  T++     + 
Sbjct: 165 FIAGVAAGMLGIGAGAFKVAVHELIMR-------MPSKVSSATSTFIIGMTALAGASVYF 217

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G + + +    +    +  VV S ++ H+        F     ++ + ML R
Sbjct: 218 SSGLLYLTLAAPMVLGTTLGAVVGSRILGHISNRVTRLFFLAVVFVLFLQMLLR 271



 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 47/289 (16%), Positives = 97/289 (33%), Gaps = 50/289 (17%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +VD + ++ ++ FL+G +  + G+GG  +  P+L+ A         + +  A+   +  I
Sbjct: 1   MVDLLTVLAIS-FLAGLVGSITGLGGASITTPLLTLA--------GVPIKYAIAAGIVSI 51

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL--- 135
             TS  +   + R G  N+K          +  ++ +++  +V    L   FA F L   
Sbjct: 52  IATSSGAAASYVRGGLSNVKAAMFLEMFTVVGAIIGAIITIYVSARLLYFLFAGFLLTSF 111

Query: 136 -------------------------LMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
                                    L G+            K            + G  +
Sbjct: 112 IGIRRHLGEELPTNVNQDRAARWLSLEGVYYDHALGREVSYKLTRPLAAGGGMFIAGVAA 171

Query: 171 GALGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
           G LG+G G F   +  L        ++ATS  +  + A     V             +S 
Sbjct: 172 GMLGIGAGAFKVAVHELIMRMPSKVSSATSTFIIGMTALAGASVY------------FSS 219

Query: 230 GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           G + +     ++  + L   + +++   I  +   + F  ++F      
Sbjct: 220 GLLYLTLAAPMVLGTTLGAVVGSRILGHISNRVTRLFFLAVVFVLFLQM 268


>gi|307945369|ref|ZP_07660705.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
 gi|307771242|gb|EFO30467.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
          Length = 107

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR-DRLYCERKFPDNY 157
           +LK W+  LP+  +  SL+ + V  + L   F +  L++G+ ML            P N 
Sbjct: 1   MLKSWLIPLPLGVLAASLVAASVSGAGLKGIFGVIALVLGLRMLFDQPHWRLGSDIPGNP 60

Query: 158 VKY 160
           ++ 
Sbjct: 61  IRS 63


>gi|254779337|ref|YP_003057442.1| hypothetical protein HELPY_0693 [Helicobacter pylori B38]
 gi|254001248|emb|CAX29223.1| Conserved hypothetical protein; putative membrane protein
           [Helicobacter pylori B38]
          Length = 255

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 72/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  + 
Sbjct: 1   MDIYALYIAIGLFTGILSGIFGI--------GGGLIIVPIMLATGHSFEESIGISILQMV 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFVLKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDFIADTKRYHLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       +Y 
Sbjct: 173 KCVALGLFFILFSSISGAFSLMYH 196


>gi|220903901|ref|YP_002479213.1| hypothetical protein Ddes_0626 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868200|gb|ACL48535.1| protein of unknown function DUF81 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 261

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 79/204 (38%), Gaps = 17/204 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + I A+F  G +  + G GGGLV +P L     L G+      H A+G +       +
Sbjct: 8   LLIGIAAAFAGGFIDAIAG-GGGLVTMPALL----LTGVPP----HAALGANKFSACLGT 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM--GIL 140
            ++     R   +  ++    +    I +   + +  H + + L K       +     L
Sbjct: 59  CVALGNFARSRLVLWRVALTGLAFALIGSWAGARLALHTEPALLGKILVGLLPVGMCATL 118

Query: 141 MLKRDRLYC--ERKFPDN---YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYK 194
           M +++R     E          +  +  +V G   G  G G G F  L   +     + +
Sbjct: 119 MPRKERARAYGEADMNGPRLWLLTPLVCLVIGAYDGFFGPGTGSFLILAFHWILRMGLME 178

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A+ATS  ++    F  ++V + +G
Sbjct: 179 ASATSKVLNLASNFAGVVVFMING 202


>gi|212224854|ref|YP_002308090.1| Predicted permease [Thermococcus onnurineus NA1]
 gi|212009811|gb|ACJ17193.1| Predicted permease [Thermococcus onnurineus NA1]
          Length = 247

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 90/261 (34%), Gaps = 26/261 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + + +    L G L GL GVGGG +M P L       G++      +A+GT L    
Sbjct: 1   MEELIIFVGLGLLVGFLVGLTGVGGGALMTPSLIFL----GVEPL----IAVGTDLLYAT 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN----KAFAIFCL 135
            T +     H R G I   +             +  LM+  ++K  LN        +  +
Sbjct: 53  VTRIFGVFFHHRRGRIRYDVSLRLFAGSLPAIALGGLMLREINKEVLNDYLTLLLGLILV 112

Query: 136 LMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYK 194
           +  +L L +  L+   K P     Y+ G + G       VG G+  +  LM        +
Sbjct: 113 ISAVLGLLKGELHVPIK-PRWTYVYLLGFIVGLTVQFTSVGAGVIVSFTLMNVARLDPKE 171

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
               +      ++  + L     G     L               ++  ++      T +
Sbjct: 172 VVGVTIVYGLALSTFSFLNYALMGSVDYHL------------AAALILGTLPGVYFGTHV 219

Query: 255 SYMIGKKYLTIGFSMIMFTTS 275
           + M  ++ L    ++I+    
Sbjct: 220 NTMADREKLKRVINIIILLIG 240


>gi|76666821|emb|CAJ31198.1| conserved hypothetical protein [uncultured sulfate-reducing
           bacterium]
          Length = 348

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
              G ++G+FG+G G   VPVL+             + +++ TS  +++ T   +   + 
Sbjct: 234 IAVGVMAGMFGLGAGWANVPVLNLLMGA-------PLKISVATSKFLLSITDTSAAWIYL 286

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G +   ++   +  + + + +   ++     +F+     +  L  G   L +
Sbjct: 287 NQGCVIPMMVVPSLVGIMLGSFIGVRILRVAKPAFVRWIVIVLLLFAGAKALTK 340


>gi|23011432|ref|ZP_00051791.1| COG0730: Predicted permeases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 246

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 93/249 (37%), Gaps = 25/249 (10%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           GLF  G  ++ VP+L+ A  +         HVA+GTS   ++ ++  + +   R G +  
Sbjct: 1   GLFAGGVSILAVPLLTYAVGV------NSPHVAIGTSALAVSVSAAGNLVPQWRAGNVKW 54

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF---- 153
           +    +     +  +  S     VD   L   F    L +G LML+R R   +       
Sbjct: 55  RCAGAFSLAGVLGALAGSAAARAVDGQSLLALFGFVMLAVGGLMLRRRRGEGDPDVRLTK 114

Query: 154 PDNYVKYIWGMVTGFL-----SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
               V   W +  GF            GG +    LML     +  A  TS     L+A 
Sbjct: 115 RSAPVLLPWLLGIGFAVGLFSGFFGIGGGFLIVPGLMLATSMPLPMAIGTS-----LVAV 169

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
            A      + + ++GL  W+L       +L      ++   L  +L+    K+ LTI F+
Sbjct: 170 SAFGAATAASYAVSGLIDWTLA---GLFILGGALGGLVGARLGQRLAGH--KRALTITFA 224

Query: 269 MIMFTTSFV 277
            ++      
Sbjct: 225 GLVILVGLY 233


>gi|332982250|ref|YP_004463691.1| hypothetical protein Mahau_1688 [Mahella australiensis 50-1 BON]
 gi|332699928|gb|AEE96869.1| protein of unknown function DUF81 [Mahella australiensis 50-1 BON]
          Length = 116

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 35/82 (42%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            I  HVA   +L    PT++++   H ++G I  K+            ++ S M   +  
Sbjct: 34  GIEQHVAQSVNLTAFIPTAIIAIAIHWKNGNIKYKLAIWITISGIAGALIGSWMAIGLSS 93

Query: 124 SFLNKAFAIFCLLMGILMLKRD 145
             L  +F IF ++MGI    R 
Sbjct: 94  RTLRISFGIFLMIMGIYEFFRK 115


>gi|26986799|ref|NP_742224.1| hypothetical protein PP_0054 [Pseudomonas putida KT2440]
 gi|24981394|gb|AAN65688.1|AE016195_9 conserved hypothetical protein [Pseudomonas putida KT2440]
          Length = 285

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 13/119 (10%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
              G + G +    G GGGI    L++F  G S+ +A    A V  L    A  V    G
Sbjct: 22  AGLGAIIGAVLALTGAGGGILAVPLLVFGLGLSMVEA----APVGLLAVGLASAVGAVLG 77

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                      G V   A L I  + +   P    L++ +    L + F+ ++      
Sbjct: 78  LRQ--------GLVRYRAALFIALVGVAAAPFGLMLAHRLPNAPLQVVFAGVLVYACLR 128



 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 48/127 (37%), Gaps = 7/127 (5%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            V+++  L      + G +  L G GGG++ VP+L     L  ++ +    +A+G +  V
Sbjct: 13  AVIEHQLLGAGLGAIIGAVLALTGAGGGILAVPLLVFGLGLSMVEAAPVGLLAVGLASAV 72

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
            A   +       R G +  +       V         ++   +  + L   FA   +  
Sbjct: 73  GAVLGL-------RQGLVRYRAALFIALVGVAAAPFGLMLAHRLPNAPLQVVFAGVLVYA 125

Query: 138 GILMLKR 144
            + + ++
Sbjct: 126 CLRIWRK 132


>gi|330815705|ref|YP_004359410.1| hypothetical protein bgla_1g07620 [Burkholderia gladioli BSR3]
 gi|327368098|gb|AEA59454.1| hypothetical protein bgla_1g07620 [Burkholderia gladioli BSR3]
          Length = 262

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 57/268 (21%), Positives = 93/268 (34%), Gaps = 31/268 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V+    G L GL GVGGG +M P+L   F       ++    A+GT L   A T  
Sbjct: 8   LLYTVSGLFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM------ISHVDKSFLNKAFAIFCLLM 137
              + H   GT++ +I             VT  M       +      +        LL 
Sbjct: 61  TGTLVHGAKGTVDWRITGRLAAGSVPAAAVTLWMLHAHGFGAASTNRLIQVVLGAALLLT 120

Query: 138 GILMLKRDRLY--------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            + ++ R +L                  +  + G+V G L     VG G     ++L   
Sbjct: 121 SVALVFRPQLAAFASRHALAPNPLRTVALTVLTGVVLGVLVSLTSVGAGAIGVTVLLL-- 178

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +Y   AT+  V + IA    L        + G+  W LG V+   ++ +L  S+    
Sbjct: 179 --LYPTLATTRIVGSDIAHAVPLTL------VAGMGHWLLGSVDWSMLVSLLLGSLPGIV 230

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             + LS    ++ L    +  +      
Sbjct: 231 AGSHLSARAPERLLRNVLAATLVLVGLK 258



 Score = 43.1 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 50/120 (41%), Gaps = 6/120 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L ++   + G L  L  VG G + V VL   +       ++     +G+ +    P +
Sbjct: 147 VALTVLTGVVLGVLVSLTSVGAGAIGVTVLLLLY------PTLATTRIVGSDIAHAVPLT 200

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++ M H   G+++  +L   +       V  S + +   +  L    A   +L+G+ ++
Sbjct: 201 LVAGMGHWLLGSVDWSMLVSLLLGSLPGIVAGSHLSARAPERLLRNVLAATLVLVGLKLV 260


>gi|313496426|gb|ADR57792.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 272

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 11/118 (9%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G + G +    G GGGI    L++F             G+S + A P  L+ +    
Sbjct: 9   AGLGAIIGAVLALTGAGGGILAVPLLVF-----------GLGLSMVEAAPVGLLAVGLAA 57

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            +  +     G V   A L I  + +   P    L++ +    L + F+ ++      
Sbjct: 58  AVGAVLGLRQGLVRYRAALFIALVGVAAAPFGLMLAHRLPNAPLQVVFAGVLVYACLR 115



 Score = 39.7 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 44/126 (34%), Gaps = 7/126 (5%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++++  L      + G +  L G GGG++ VP+L            + M  A    L  +
Sbjct: 1   MIEHQLLGAGLGAIIGAVLALTGAGGGILAVPLLVFGL-------GLSMVEAAPVGLLAV 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              + +  +   R G +  +       V         ++   +  + L   FA   +   
Sbjct: 54  GLAAAVGAVLGLRQGLVRYRAALFIALVGVAAAPFGLMLAHRLPNAPLQVVFAGVLVYAC 113

Query: 139 ILMLKR 144
           + + ++
Sbjct: 114 LRIWRK 119



 Score = 35.4 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 29/78 (37%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +    ++ M   + TSL VIA  S  S +     G ++ ++   +     +  +
Sbjct: 177 FVIIPALNRYTNLRMASIVSTSLAVIALVSTGSVVSASLAGVMHWQVGAPFAVGAVLGLL 236

Query: 113 VTSLMISHVDKSFLNKAF 130
           +   + + +    L + F
Sbjct: 237 LARPLAARLAGPRLQQMF 254


>gi|308184466|ref|YP_003928599.1| hypothetical protein HPSJM_03450 [Helicobacter pylori SJM180]
 gi|308060386|gb|ADO02282.1| hypothetical protein HPSJM_03450 [Helicobacter pylori SJM180]
          Length = 255

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 73/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  +A
Sbjct: 1   MDIYALYIAIGLFTGILSGIFGI--------GGGLIIVPIMLATGHSFEESIGISILQMA 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FAI  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFILKIVSSKILMVIFAILVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDFITDTKRYHLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       +Y 
Sbjct: 173 KCVALGLFFILFSSISGAFSLMYH 196


>gi|307637364|gb|ADN79814.1| Integral membrane protein [Helicobacter pylori 908]
 gi|325995957|gb|ADZ51362.1| Integral membrane protein [Helicobacter pylori 2018]
 gi|325997551|gb|ADZ49759.1| putative integral membrane protein [Helicobacter pylori 2017]
          Length = 255

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 72/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  + 
Sbjct: 1   MDIYALYITIGLFTGILSGIFGI--------GGGMIIVPIMLATGHSFEESIGISILQMV 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFILKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDLITDTKRYHLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       +Y 
Sbjct: 173 KCVALGLFFILFSSISGAFSLMYH 196


>gi|292493762|ref|YP_003529201.1| hypothetical protein Nhal_3799 [Nitrosococcus halophilus Nc4]
 gi|291582357|gb|ADE16814.1| protein of unknown function DUF81 [Nitrosococcus halophilus Nc4]
          Length = 251

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 95/258 (36%), Gaps = 25/258 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + + S L+   S   G G GLV +P L       GI        A+ T         + +
Sbjct: 9   LFLISLLANLFSAFSGGGAGLVQLPALIFLGLPFGI--------ALATHKVASVALGIGA 60

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + H R  T+  +     +       V  + +I  +       A     L +G   L + 
Sbjct: 61  TLRHLRENTLEQRFALFILACGLPGVVFGANVILKIPDRTAELALGCLTLGLGTYSLLKP 120

Query: 146 RLYCERKFPDNYVK-YIWG----MVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATS 199
            L       + + + Y+ G     + G L+G+L  G G+F  L ++ ++G    +A A +
Sbjct: 121 NLGQNSHLLNRHWQGYLVGGGILFLIGVLNGSLTSGTGLFVTLWLVRWFGLDYKRAVAYT 180

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +         +   ++G G   L    LG +    +  +L  S+L   L   L+ + G
Sbjct: 181 LVL---------VGLFWNGTGALTL--GWLGSIQWSWLPALLLGSLLGGYLGAHLAIVKG 229

Query: 260 KKYLTIGFSMIMFTTSFV 277
            +++   F ++     F 
Sbjct: 230 NRWIKRSFEIVTLLVGFK 247


>gi|283853392|ref|ZP_06370638.1| protein of unknown function DUF81 [Desulfovibrio sp. FW1012B]
 gi|283571205|gb|EFC19219.1| protein of unknown function DUF81 [Desulfovibrio sp. FW1012B]
          Length = 419

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 98/301 (32%), Gaps = 72/301 (23%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
               + I     +G ++G  G GGG ++ P L        +   +   +A+GT L  I  
Sbjct: 72  QIFLVSIAVGLAAGLITGCIGAGGGFIITPAL--------MAAGVKGILAVGTDLFHIFA 123

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS-------HVDKSFLNKAFAIF 133
            ++M    H++ G ++ K+   ++      T +   +          + + F++  +A+ 
Sbjct: 124 KAIMGTAVHKKLGNVSGKLAIAFLVGSGGGTFIGGAINKGLYNKDPLLSEFFISSIYAVL 183

Query: 134 CLLMGILML-------------------------------------------KRDRLYCE 150
              +G   L                                             +     
Sbjct: 184 LGFLGFYALFDFLRASRKESGSDAHGGSHGGPAGVTGMALKLQNLNIAPMITFDEDFVPG 243

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFP 209
            K    ++    GM+ G L+  +GVGGG  T  + ++ +G S      T        A  
Sbjct: 244 GKRISGWIVAAGGMIVGILAALMGVGGGFVTFPMFVYVFGVSSMTTVGTDILQIIFTAGL 303

Query: 210 ALLVRIYSGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
             +              +++ G+V     + +L  S+L   +    + ++   ++   ++
Sbjct: 304 GAIA------------QYAIYGYVFYTLAMGMLLGSLLGIQVGALTTKVVKGIHIRGFYA 351

Query: 269 M 269
           M
Sbjct: 352 M 352



 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 42/118 (35%), Gaps = 8/118 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++     + G L+ L GVGGG V  P+    F        +     +GT +  I  T+ 
Sbjct: 250 WIVAAGGMIVGILAALMGVGGGFVTFPMFVYVF-------GVSSMTTVGTDILQIIFTAG 302

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +  +     +G +   +    +    +   V +L    V    +   +A+  +   I 
Sbjct: 303 LGAIAQYAIYGYVFYTLAMGMLLGSLLGIQVGALTTKVVKGIHIRGFYAMSIIAGFIN 360


>gi|217033695|ref|ZP_03439122.1| hypothetical protein HP9810_5g37 [Helicobacter pylori 98-10]
 gi|216943884|gb|EEC23321.1| hypothetical protein HP9810_5g37 [Helicobacter pylori 98-10]
 gi|308063533|gb|ADO05420.1| hypothetical protein HPSAT_03410 [Helicobacter pylori Sat464]
          Length = 255

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 73/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  +A
Sbjct: 1   MDIYALYIAIGLFTGILSGIFGI--------GGGMIIVPIMLATGHSFEESIGISILQMA 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFILKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDFIADTKRYHLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       IY 
Sbjct: 173 KCVALGLFFILFSSISGAFSLIYH 196


>gi|74318631|ref|YP_316371.1| hypothetical protein Tbd_2613 [Thiobacillus denitrificans ATCC
           25259]
 gi|74058126|gb|AAZ98566.1| membrane protein, putative [Thiobacillus denitrificans ATCC 25259]
          Length = 361

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 101/296 (34%), Gaps = 63/296 (21%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+I+  F+ G +SG  G GG  V+ P +                VA+ +++    P ++
Sbjct: 15  ILLILVGFVGGMVSGFIGSGGAFVLTPAMMTL--------GAPGIVAVASNICHKFPKAL 66

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS--------FLNKAFAIFCL 135
           +  ++  ++G +++K+            +    +++ +  +        +++  F +   
Sbjct: 67  VGAVKRNKYGQVDIKLGLILGLFAEAGVLFGKGVMTDIKNTFGAVGTDLYVSGMFVVTLA 126

Query: 136 LMGILMLKR----------------------DRLYCERKFPDNYV-------------KY 160
           ++G  + K                        R     + P   +               
Sbjct: 127 IVGGFVFKDYRKLKALDDAGQGEEAAPLTRLARWVQSVRIPGTMIYSRGAQAEISILFLI 186

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
             G  TGFL+ A+ VGG I    ++   G     A+AT   ++ ++     +     G  
Sbjct: 187 PIGFATGFLASAIAVGGFIGVPAMIYILGVPAIMASATELVIAFIMGLGGTIFYGLEGV- 245

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                      V+I   ++IL  S+    L    +  +    +    ++IM T  F
Sbjct: 246 -----------VDIRLAMLILLGSLFGVQLGAIGTTYVKDYQVKFTMAVIMLTVLF 290


>gi|88706444|ref|ZP_01104149.1| conserved hypothetical protein, membrane [Congregibacter litoralis
           KT71]
 gi|88699380|gb|EAQ96494.1| conserved hypothetical protein, membrane [Congregibacter litoralis
           KT71]
          Length = 250

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 60/149 (40%), Gaps = 9/149 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+  A  ++G L+ + G GG L+ VP++            +    A GT+   I   +
Sbjct: 8   LALLTGAGTIAGMLNVIAG-GGSLMTVPIMLFL--------GLSGPEANGTNRISIIAQN 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++     R G    ++            ++ +L+   +D  + ++  A+  + + +LM 
Sbjct: 59  IVAVRTFFRRGFSEFRLSLTLSAAAIPGAILGALVGVQLDGEWFDRVLALVMIAVLVLMQ 118

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSG 171
              +   +   P    + + G +  F +G
Sbjct: 119 IPGKKSADTSGPLTPKRLMLGHILMFAAG 147


>gi|86139436|ref|ZP_01058005.1| hypothetical protein MED193_13338 [Roseobacter sp. MED193]
 gi|85823939|gb|EAQ44145.1| hypothetical protein MED193_13338 [Roseobacter sp. MED193]
          Length = 252

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 77/201 (38%), Gaps = 13/201 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + L++VA F +G +  + G GGGL+ VPVL  A              A+ T+     
Sbjct: 6   IETLLLLMVAGFAAGFIDAVAG-GGGLITVPVLLLA--------GANPVTALATNKIQGL 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  +   + + G +N++       +    +++ +L+I+ +   ++     +  + + +
Sbjct: 57  FGAATAARAYAKGGHVNLREQAGSALIAFAASILGALLITILPTGWIRLILPVLLIGIAL 116

Query: 140 LMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKA 195
               +  L      R+            + G   G LG G G F     +   G  I KA
Sbjct: 117 FFALKKGLGDQDRARRLSPAVFAMTMVPLCGAYDGLLGPGAGSFYMLAFVSLAGYGILKA 176

Query: 196 TATSAGVSALIAFPALLVRIY 216
           TA +  ++      AL     
Sbjct: 177 TAHTKLLNLASNAGALCAFAL 197


>gi|325983148|ref|YP_004295550.1| hypothetical protein NAL212_2587 [Nitrosomonas sp. AL212]
 gi|325532667|gb|ADZ27388.1| protein of unknown function DUF81 [Nitrosomonas sp. AL212]
          Length = 276

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 89/284 (31%), Gaps = 47/284 (16%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ +   I+    +G +  L G GG ++ VP+L         + +    +A+        
Sbjct: 1   MEILLTSILLGAGTGAVLALTGAGGTIIAVPLLIFGLHFTVAESAPIALLAV-------C 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  +   R   +  +          +       +   +  + L   FA+    + +
Sbjct: 54  VSSAIGALIALRQRRVRYRAAGFIAITGIVVAPAGIWLAQKLPNAPLTVLFALVLFYVAV 113

Query: 140 LMLKRDRLYCERKFPDNYVKYIW---------------------------GMVTGFLSGA 172
            ML++             ++                              G+ TGF+SG 
Sbjct: 114 NMLRQSAQPMAETRDATDLQTGLAVIPCRLEYEHGRLIWGWPCVRALGYSGIATGFISGL 173

Query: 173 LGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF 231
           LGVGGG      +       +    ATS  V ALI+   +                 LG 
Sbjct: 174 LGVGGGFVVVPALKRATNLPMQSILATSLAVIALISAVGVASATV------------LGT 221

Query: 232 VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           +N    L     ++    +   ++  +    L  GF+++    +
Sbjct: 222 MNWSVALPFAAGALAGMLIGRAIAGYLAPSRLQQGFAVVSMGIA 265



 Score = 42.8 bits (100), Expect = 0.056,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 35/84 (41%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           ++ M   + TSL VIA  S +        GT+N  +   +        ++   +  ++  
Sbjct: 191 NLPMQSILATSLAVIALISAVGVASATVLGTMNWSVALPFAAGALAGMLIGRAIAGYLAP 250

Query: 124 SFLNKAFAIFCLLMGILMLKRDRL 147
           S L + FA+  + + + M+ R   
Sbjct: 251 SRLQQGFAVVSMGIAVWMIFRLFW 274


>gi|241668076|ref|ZP_04755654.1| hypothetical protein FphipA2_04864 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876611|ref|ZP_05249321.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842632|gb|EET21046.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 253

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 90/213 (42%), Gaps = 15/213 (7%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMHV 69
           MV    +        I+   FL+  +  + G GGGL+ +P LS     ++ +  +  +  
Sbjct: 1   MVEFFSEHFYFLCIFIVAMGFLASFIDAIAG-GGGLISIPALSMTGLPIVTVLGTNKLQA 59

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           ++GT++ V         +++ + G IN+K +   +    I     +++   +   F+N  
Sbjct: 60  SIGTAMAV---------LKYYKSGLINIKTVLRGLIAGFIGACSGTILTLVIHNDFMNTL 110

Query: 130 FAIFCLLMGILMLKRDRLYC---ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
             I  +++ I  +    L     +++  +     I+G + G   G  G G G F  + ++
Sbjct: 111 VPILLIVIFIFSILNKNLGVNEGKKRMSEMTFFTIFGFILGAYDGFFGPGTGNFWIIAIV 170

Query: 187 FY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
           ++ G +  +A+  +  ++      +L V   SG
Sbjct: 171 YFLGYTFLQASGYAKVLNLKSNLFSLAVFALSG 203


>gi|332184514|gb|AEE26768.1| Membrane protein, putative [Francisella cf. novicida 3523]
          Length = 258

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 101/252 (40%), Gaps = 27/252 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMHVAMGTSLGVIAPTS 82
             II   FL+  +  + G GGGL+ +P LS     ++ +  +     ++GT + V     
Sbjct: 14  IFIISMGFLASFIDAIAG-GGGLISIPALSLTGLPIVTVLGTNKFQASIGTGMAV----- 67

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               +++ + G I++K +   +    I     +L+   +   F+N    I  + + I  +
Sbjct: 68  ----LKYYKSGLIDIKTVVRGLVAGFIGACCGTLLTLMIHNDFMNNIVPILLIAVFIFSI 123

Query: 143 KRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATAT 198
               L     +++  +     ++G V G   G  G G G F  + ++++ G +  +A+  
Sbjct: 124 VNKNLGVTQGKKRMSEVAFFTLFGFVLGAYDGFFGPGTGNFWIIAIVYFLGYTFLQASGY 183

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  ++      +L V   SG             VNI   L++   S       +K+  + 
Sbjct: 184 AKMLNLKSNVFSLTVFALSGQ------------VNISFGLLMALGSFFGGIAGSKMVILK 231

Query: 259 GKKYLTIGFSMI 270
           G K +   F ++
Sbjct: 232 GSKLVRPIFIIV 243


>gi|117929164|ref|YP_873715.1| hypothetical protein Acel_1957 [Acidothermus cellulolyticus 11B]
 gi|117649627|gb|ABK53729.1| protein of unknown function DUF81 [Acidothermus cellulolyticus 11B]
          Length = 307

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 87/265 (32%), Gaps = 32/265 (12%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +A  L G L GL G+GGG +M P+L   F        +    A+ + L        + 
Sbjct: 7   LSIAGALVGFLIGLTGMGGGALMTPILIMFF-------GVAPLAAVSSDLVASLFMKPVG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR- 144
              H R GT++ ++    I           L+I  +  S +     +   ++ +L +   
Sbjct: 60  AAVHWRRGTVHHRLALWLIVSSVPAAFGGVLLIRALGGSHVQSTVKVLLGVVLLLTIASM 119

Query: 145 -DRLYCERKFP---------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY- 193
             R    R  P            +    G+  G   G   VG G     L+L     +  
Sbjct: 120 LVRNRLTRHVPVVAVSQVKVRPLLTVAIGVFGGLAVGMTSVGSGTLVIALLLLAYPQLRA 179

Query: 194 -KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +   T    +  +   A L                 G V I   L +L  +I    L  
Sbjct: 180 GQLVGTDLVQAIPLVGAAALGHAL------------FGDVKISVTLSLLVGAIPGVYLGA 227

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           +LS      ++    ++++  ++  
Sbjct: 228 RLSAGRAVGWVRPILTVVLLASAVK 252


>gi|296273500|ref|YP_003656131.1| hypothetical protein Arnit_1970 [Arcobacter nitrofigilis DSM 7299]
 gi|296097674|gb|ADG93624.1| protein of unknown function DUF81 [Arcobacter nitrofigilis DSM
           7299]
          Length = 244

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 90/233 (38%), Gaps = 23/233 (9%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+L            + M  A+  S+  +  +S+     + +  +  +        
Sbjct: 25  MILVPMLLL--------SGLVMKEAISISVVQMVFSSIYGSFLNSKKQSGILIDGIAIGG 76

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI-WGM 164
              I  + +  +++      L   F +  L   + +      + +++   + +  +  G 
Sbjct: 77  GGFIGGLCSGFVVAAFSNLTLQYIFILIMLASILKLFFTPAEHDKKEKNQSILLLVLIGA 136

Query: 165 VTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           ++G ++ ++G GG I    +++ F   ++ +AT          +    +   ++G  L  
Sbjct: 137 ISGAIAMSVGAGGSIIITPILVGFMNYNLKRATTLGLFFVIFSSTAGFISLSFNGHML-- 194

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              +S G       +++   S++   L  K+ +MI        + +I++T +F
Sbjct: 195 ---YSQG-------IMVGLASLVGVYLGIKIKHMINIVSYKK-YILILYTLTF 236


>gi|170738493|ref|YP_001767148.1| hypothetical protein M446_0129 [Methylobacterium sp. 4-46]
 gi|168192767|gb|ACA14714.1| protein of unknown function DUF81 [Methylobacterium sp. 4-46]
          Length = 268

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 72/213 (33%), Gaps = 9/213 (4%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           HVA+GTS   ++ ++  + +   R G +  +    +     +  +  S     VD   L 
Sbjct: 46  HVAIGTSALAVSVSAAGNLVPQWRAGNVKWRCAAAFSLAGILGALAGSASAKAVDGQSLL 105

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
             F +  L++G LML++ R   +                  L   LG+G  +        
Sbjct: 106 ALFGVVMLVVGGLMLRKRRGEGDPDVRLTRRSAPV-----LLPWLLGIGFSVGLFSGFFG 160

Query: 188 YGASIYKATATSAGVS--ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
            G             S    +A    LV + +          + G ++     + +   +
Sbjct: 161 IGGGFLIVPGLMLATSMPLPMAIGTSLVAVSAFGAATAASYAASGLIDWPLAGLFILGGV 220

Query: 246 LITPLATKLSYMIG--KKYLTIGFSMIMFTTSF 276
           L   +  +L   +   K+ LT+ F+ ++     
Sbjct: 221 LGGLVGARLGKRLAGHKRALTLTFAGLVILVGL 253


>gi|332296377|ref|YP_004438300.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
 gi|332179480|gb|AEE15169.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
          Length = 322

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/281 (14%), Positives = 104/281 (37%), Gaps = 48/281 (17%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + V  F  G ++ L GVGGG++ VP+L   F          M    G  L V    S+ +
Sbjct: 52  LFVFCFGLGIIAVLAGVGGGVLFVPILGTFFPF-------HMDFVRGAGLMVALAGSLSA 104

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
                     ++++      +  I++++ +++   + ++ +  A  +  L +  ++L   
Sbjct: 105 GPGLLMRNLASLRLCMPMALIASISSIMGAMVGLALPQNIVRIALGLVILAICFVLLTSK 164

Query: 146 RL----------------------------YCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
           R                                 +  ++++ +I   + GF++G  G+G 
Sbjct: 165 RSEFPEITKRDKIAQILGIHGIYYEITQRRNINWQIQNSHIGFILFFLVGFIAGMFGLGA 224

Query: 178 GIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G     +     GA +  + A+S  + ++    A  + + +G  L          + + +
Sbjct: 225 GWANVAVFNLVLGAPLKISVASSNFLLSITDTSAAWIYLNNGAVLPI--------IAVPS 276

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           V+ +    +L + +  +L      + +     +++  +  +
Sbjct: 277 VVGM----MLGSQVGVRLLARTKPRIVRWLVIILLSLSGLM 313



 Score = 42.0 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +  +  FL G ++G+FG+G G   V V +             + +++ +S  +++ T   
Sbjct: 205 IGFILFFLVGFIAGMFGLGAGWANVAVFNLVLGA-------PLKISVASSNFLLSITDTS 257

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +   +  +G +   I    +  + + + V   +++      +     I   L G++ + +
Sbjct: 258 AAWIYLNNGAVLPIIAVPSVVGMMLGSQVGVRLLARTKPRIVRWLVIILLSLSGLMSILK 317


>gi|319443127|ref|ZP_07992283.1| hypothetical protein CvarD4_15336 [Corynebacterium variabile DSM
           44702]
          Length = 275

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 93/270 (34%), Gaps = 34/270 (12%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++++ + L+G +  + G GGGLV++P++            +   VA+GT+       +
Sbjct: 19  LLILVLGAVLAGGVDAVIG-GGGLVLIPLILAC------APGLPAQVALGTNKFTAVFGT 71

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + +   R   I+ + ++    +  + +   +LM S V    L     +  L  G  + 
Sbjct: 72  ASAGLRMVRTVRIDWRAVRLCAPLAGLCSAGGALMASAVSSDVLRPVVVVLMLAAGAFVA 131

Query: 143 KRDRL--------------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-F 187
            R                           +      + G   G  G G G+F  ++    
Sbjct: 132 LRPSFGRDTGATGASGVDATPRPSRRRLALGLGLIALIGAYDGFFGPGTGMFLVIVFTAL 191

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
              ++ ++ A +  V+       L+V                G V     +++   ++L 
Sbjct: 192 MSRTLIQSLAMTKLVNTATNIGGLVVFAAG------------GHVLWLLGIVLAVFNVLG 239

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             +  K+    G  ++ I   +++   S  
Sbjct: 240 AQVGAKIVLDRGTGFVRIALLVLIVVMSAK 269


>gi|317009308|gb|ADU79888.1| hypothetical protein HPIN_03260 [Helicobacter pylori India7]
          Length = 255

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 73/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  +A
Sbjct: 1   MDIYMLYIAIGLFTGILSGIFGI--------GGGMIIVPIMLATGHSFEESIGISILQMA 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFVLKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDFTADTKRYHLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       IY 
Sbjct: 173 KCVALGLFFILFSSISGAFSLIYH 196


>gi|304408752|ref|ZP_07390373.1| protein of unknown function DUF81 [Shewanella baltica OS183]
 gi|307302755|ref|ZP_07582510.1| protein of unknown function DUF81 [Shewanella baltica BA175]
 gi|304352573|gb|EFM16970.1| protein of unknown function DUF81 [Shewanella baltica OS183]
 gi|306913115|gb|EFN43537.1| protein of unknown function DUF81 [Shewanella baltica BA175]
          Length = 252

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 81/261 (31%), Gaps = 35/261 (13%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D   L+ +++  +   +  FG+GGG++++ ++++      I             L  +  
Sbjct: 14  DIFALLTLSAAFTSFFTACFGIGGGVMLLGLMAQVLPPQLIIP-----------LHGVVQ 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                         I  +++  +     +  ++ S+++  +  S +    A F L     
Sbjct: 63  LGSNGGRAALGWRYIEWRLIAAFFPGAILGALLGSVVLVALPPSVMYLTIAAFILYSCW- 121

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG----GIFTNLLMLFYGASIYKAT 196
                     +K          G +T F+S   G  G         L +  +      A 
Sbjct: 122 -----GPKLPKKVFGTLGTLAAGAITTFISLFAGATGPLVAAFIKQLEVDRFRTVATFAM 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A S      I     +    + W                 ++ ++    + T +  K+  
Sbjct: 177 AMSLQHGVKIVVYEGMGGALADW--------------WPLLVCMILSGTVGTWIGFKMLK 222

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            +  K+    FS+++   +  
Sbjct: 223 RVADKHFQTAFSIVLTLLAIR 243


>gi|218531986|ref|YP_002422802.1| hypothetical protein Mchl_4074 [Methylobacterium chloromethanicum
           CM4]
 gi|218524289|gb|ACK84874.1| protein of unknown function DUF81 [Methylobacterium
           chloromethanicum CM4]
          Length = 263

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 81/239 (33%), Gaps = 24/239 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +P L     L G+D       A+ T+    +  SV + +   R G I  +    
Sbjct: 27  GGGLMTLPALL----LAGLDPVS----AIATNKLQGSAGSVSATIAFARRGLIRWREAGP 78

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK---FPDNYVK 159
                 + +V  +L +S + +  L+    +  + + +      R+  E            
Sbjct: 79  AALGAGLASVGGALCVSLLPRPVLDALVPLMLVGIALYFATARRMSNEDAAARITPGLFA 138

Query: 160 YIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
                  GF  G  G G G F     +   G  + +ATA +   +A     +L +     
Sbjct: 139 VTLAPAVGFYDGVFGPGAGSFYMIGFVTLLGLGVVRATAHTKLSNAASNLGSLALFTLQ- 197

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                      G V +   L +   + L   + + L+  +G + +     +I    +  
Sbjct: 198 -----------GAVILPVGLAMAVGAFLGAQVGSALAVRLGARLIRPLLVVIACAMALR 245


>gi|83720254|ref|YP_441968.1| hypothetical protein BTH_I1422 [Burkholderia thailandensis E264]
 gi|83654079|gb|ABC38142.1| membrane protein, putative [Burkholderia thailandensis E264]
          Length = 262

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 58/270 (21%), Positives = 95/270 (35%), Gaps = 33/270 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  ++    G L GL GVGGG +M P+L   F       ++    A+GT L   A T  
Sbjct: 6   LLYSLSGVFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAAITKA 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI------SHVDKSFLNKAFAIFCLLM 137
                H   GT+  +I             +T  ++      S      +        LL 
Sbjct: 59  TGTFVHGLKGTVEWRITGRLAAGSVPAAAITLWLLHSHGMHSQATSRMIQLVLGAALLLT 118

Query: 138 GILMLKRDRLYC-----ERKFPDNYVKYIW-----GMVTGFLSGALGVGGGIFTNLLMLF 187
            + +L R +L        R  P +  + +      G V G L     VG G     ++L 
Sbjct: 119 SLSLLFRPQLAAFAAKRTRALPPSPARTLAATVLTGAVLGVLVSLTSVGAGAIGVTVLLL 178

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
               +Y A +T+  V + IA    L        + G+  W LG V+   ++ +L  S+  
Sbjct: 179 ----LYPALSTTRIVGSDIAHAVPLTL------VAGVGHWMLGSVDWAILVSLLIGSVPG 228

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             + + LS    +  L    +  +      
Sbjct: 229 IVVGSHLSTRAPEGLLRRILATTLVAVGAK 258



 Score = 42.4 bits (99), Expect = 0.077,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 6/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  L  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 151 VLTGAVLGVLVSLTSVGAGAIGVTVLLLLY------PALSTTRIVGSDIAHAVPLTLVAG 204

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + H   G+++  IL   +       VV S + +   +  L +  A   + +G  ++  
Sbjct: 205 VGHWMLGSVDWAILVSLLIGSVPGIVVGSHLSTRAPEGLLRRILATTLVAVGAKLVLS 262


>gi|186684124|ref|YP_001867320.1| hypothetical protein Npun_R3998 [Nostoc punctiforme PCC 73102]
 gi|186466576|gb|ACC82377.1| protein of unknown function DUF81 [Nostoc punctiforme PCC 73102]
          Length = 258

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 49/156 (31%), Gaps = 7/156 (4%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ TS   I  TS+   +++   G  + K +        +TT +     + +    +   
Sbjct: 45  AIATSSLAIVITSISGSLQNWWMGYFDFKRVIYLGIPAFLTTGIGVYFANKIPSYIILFT 104

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYV-------KYIWGMVTGFLSGALGVGGGIFTN 182
           F I  L    L+  R  L    K     V           G            GG I   
Sbjct: 105 FGIILLANIYLIELRKGLALNEKENTGPVFNPLVSKISTGGAAGILAGLFGLGGGTIMVP 164

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           L ML  G  I  A  TS GV  + A  A       G
Sbjct: 165 LQMLLLGEEIKVAIQTSLGVIVITALVACTGHTLEG 200


>gi|154246428|ref|YP_001417386.1| hypothetical protein Xaut_2487 [Xanthobacter autotrophicus Py2]
 gi|154160513|gb|ABS67729.1| protein of unknown function DUF81 [Xanthobacter autotrophicus Py2]
          Length = 307

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 58/147 (39%), Gaps = 13/147 (8%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   I  +       G +SG+FGVGGG +M P+L       G+  +    V
Sbjct: 1   MTIYLPIAELPIAIFTVFAMGLAVGFISGMFGVGGGFLMTPLLIF----TGVPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+ +    +A +S    + + R G +++ +    +      T    ++   +        
Sbjct: 53  AVASVSPYMAASSFSGALSYWRKGMMDLTLAGVLLSGGLAGTAAGVMLFLWLRVIGQVDL 112

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCER 151
            +  ++A+    +G LML        R
Sbjct: 113 AIRISYALLLGTIGTLMLVESLKALAR 139



 Score = 43.5 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 26/55 (47%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
           +  G+  GF+SG  GVGGG     L++F G     A A+ +   A  +F   L  
Sbjct: 18  FAMGLAVGFISGMFGVGGGFLMTPLLIFTGVPPAVAVASVSPYMAASSFSGALSY 72


>gi|284044221|ref|YP_003394561.1| hypothetical protein Cwoe_2767 [Conexibacter woesei DSM 14684]
 gi|283948442|gb|ADB51186.1| conserved hypothetical protein [Conexibacter woesei DSM 14684]
          Length = 131

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 7/118 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +       G +SGL G+GGG VMVP L   F   G         A   SL  I P S+ +
Sbjct: 19  LAGIGLAGGFMSGLLGIGGGTVMVP-LMVLFARFG------QRDAHAISLAAIIPISIAA 71

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              +   G  ++ +         +     + +++      L  AF IF L+    ++ 
Sbjct: 72  IAVYGGAGKGDLLVAAGLTIGAVLGARTGAGLLAKAPDRVLKAAFGIFMLIAAASIVL 129



 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 40/123 (32%), Gaps = 13/123 (10%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                   G+  GF+SG LG+GGG     LM+ +       A A S      I+  A+ V
Sbjct: 15  SRSTLAGIGLAGGFMSGLLGIGGGTVMVPLMVLFARFGQRDAHAISLAAIIPISIAAIAV 74

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
              +G G             +     +   ++L       L      + L   F + M  
Sbjct: 75  YGGAGKGD------------LLVAAGLTIGAVLGARTGAGLLAKAPDRVLKAAFGIFMLI 122

Query: 274 TSF 276
            + 
Sbjct: 123 AAA 125


>gi|218673164|ref|ZP_03522833.1| hypothetical conserved membrane protein [Rhizobium etli GR56]
          Length = 186

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 51/156 (32%), Gaps = 12/156 (7%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G +  + G GGGL+ VP +  A    GI         +GT+       +  + + + R G
Sbjct: 20  GFVDAIAG-GGGLITVPAMLIA----GIPPLQT----LGTNKVQSIFGAASATLAYARKG 70

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY---CE 150
            + +        +  +   + + + + V    L     +  L + I    +  L      
Sbjct: 71  HVQLHEQLPMALMAVMGGAIGAALATIVPGQVLQAIMPVLLLAIAIFFAVKPNLNDLDKH 130

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
           R               GF  G  G G G F  L  +
Sbjct: 131 RIITPFVFGLTLVPAIGFYDGIFGPGTGSFFMLAFV 166


>gi|284164318|ref|YP_003402597.1| hypothetical protein Htur_1032 [Haloterrigena turkmenica DSM 5511]
 gi|284013973|gb|ADB59924.1| protein of unknown function DUF81 [Haloterrigena turkmenica DSM
           5511]
          Length = 329

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 92/279 (32%), Gaps = 50/279 (17%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
             +    L G L G FG+GG  ++ P L                VA+G+ L  +  TSV+
Sbjct: 13  FFVGFGLLIGVLFGFFGMGGSFLVTPALLVV--------GYPAPVAVGSGLAFVFGTSVI 64

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMGI 139
             + HR HG ++  +       L     + + ++  +         ++  +      +G+
Sbjct: 65  GALRHRDHGQVSYALAAVMSLGLLFGIEIGTRIVFLLAGLGSADVVISAVYVGLLSAVGL 124

Query: 140 LMLKRDRLYCERKFPDN------------------------YVKYIWGMVTGFLSGALGV 175
            +L+  R                                  +V ++ G   G LSG LGV
Sbjct: 125 FVLRDARTADSDVETGRVATGVLAIELPPMVSLSGGATVSVWVIFVVGSGIGVLSGCLGV 184

Query: 176 GGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           GGG     +M++ +G     A  TS     +       V   S              V I
Sbjct: 185 GGGFLLLPVMVYGFGVPTAVAAGTSVLQILISGAFGTFVYAQSN------------AVEI 232

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
             V  +L  S     +    + ++ +  L   F+ ++  
Sbjct: 233 PVVAALLVGSAFGARIGVSATRLVNEADLKGYFAGMLLA 271


>gi|326388989|ref|ZP_08210571.1| protein of hypothetical protein function DUF81 [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326206589|gb|EGD57424.1| protein of hypothetical protein function DUF81 [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 259

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 84/243 (34%), Gaps = 30/243 (12%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L   F        I    A+GT L   + T +   + H    +++ KI++      
Sbjct: 31  MTPLLVLMF-------GISPTTAVGTDLLFASSTKIAGSLIHGSRSSVDWKIVRRLASGS 83

Query: 108 PITTVVTSLMISHV------DKSFLNKAFAIFCLLMGILMLKRDRLYC-------ERKFP 154
               ++T +++S +          +  A     +L     L ++RL              
Sbjct: 84  VPAAILTLIVVSGLGQPPKAASKVMLVALGCMLILTAFATLFQNRLASFAQHHEQRDDKT 143

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
                 + G + G       VG G      +L     +Y A+  S  V + IA    L  
Sbjct: 144 TRLPTIVLGALLGVAVTVSSVGAGAIGVTALLM----LYPASRVSRIVGSDIAHAVPLTL 199

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           I       G   W +G VN+  ++ +L  S+    + + LS     + L    + ++  +
Sbjct: 200 I------AGFGHWVIGDVNVPLLVNLLIGSVPAVAVGSLLSTRASDRVLRPILAAVLLIS 253

Query: 275 SFV 277
            + 
Sbjct: 254 GYK 256



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 42/116 (36%), Gaps = 6/116 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IV   L G    +  VG G + V  L   +    +   +   +A         P ++++ 
Sbjct: 149 IVLGALLGVAVTVSSVGAGAIGVTALLMLYPASRVSRIVGSDIAHA------VPLTLIAG 202

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             H   G +N+ +L + +        V SL+ +      L    A   L+ G  +L
Sbjct: 203 FGHWVIGDVNVPLLVNLLIGSVPAVAVGSLLSTRASDRVLRPILAAVLLISGYKLL 258


>gi|330998759|ref|ZP_08322487.1| hypothetical protein HMPREF9439_00101 [Parasutterella
           excrementihominis YIT 11859]
 gi|329576256|gb|EGG57772.1| hypothetical protein HMPREF9439_00101 [Parasutterella
           excrementihominis YIT 11859]
          Length = 253

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 91/267 (34%), Gaps = 22/267 (8%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  +  I +  V  F++G +  + G GGGL+ +PVL            I  H  +GT   
Sbjct: 2   DITLTVILVCFVVFFIAGFVDAIAG-GGGLITMPVLLLL--------GIPAHYTLGTGKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  S+ + +   + G +  +++   +       V+ S     +    +         +
Sbjct: 53  ASSLGSITALITFWKRGAVIKEVVLLGVISSYFGAVIASATTLLISNEKMTIIMIFLLPV 112

Query: 137 MGILMLKRDRLYCERKFPDNYVKY----IWGMVTGFLSGALGVGGGIFTNL-LMLFYGAS 191
             +L L    L    +       +      G+  GF  G  G G G F  + + L   A 
Sbjct: 113 AILLSLFCGTLKLTEEDLPKKGLWWRVSAIGLSVGFYEGFFGPGAGSFFLIGIHLLLKAG 172

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           + KA+ T+   +      A+     +G     L         +   +  +  + L    A
Sbjct: 173 LVKASGTAKAFNIAANLGAVTTFASAGTLYYSLA--------LPCAVASILGNRLGAIYA 224

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            K+   + +  L     M++ +    F
Sbjct: 225 VKIGPTLVRSMLYFVLVMLLISLITRF 251


>gi|146280310|ref|YP_001170466.1| hypothetical protein Rsph17025_4316 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145558551|gb|ABP73161.1| hypothetical protein Rsph17025_4316 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 264

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 45/126 (35%), Gaps = 5/126 (3%)

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
             +  ++ + +          +   + +  + L +  A   + + ++++    +      
Sbjct: 78  AAHWPVILNLLAGSLAGAWFGAGCATRLRTATLYRVIAGLMVAIAVILVAGHGVTSGAPL 137

Query: 154 PDNYVKYIWGMV----TGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAF 208
              + +   G++     G ++  +GV GG +    L++ +GA I  A + S  VS     
Sbjct: 138 LQGWGQVAAGVLAGLAIGLVASLMGVAGGELLIPTLVILFGADIKLAGSLSLAVSLPTML 197

Query: 209 PALLVR 214
                 
Sbjct: 198 VGFARY 203



 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 12/126 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +   ++A    G ++ L GV GG +++P L   F          + +A   SL V  PT 
Sbjct: 144 VAAGVLAGLAIGLVASLMGVAGGELLIPTLVILFGAD-------IKLAGSLSLAVSLPTM 196

Query: 83  VMSFMEHRRHGTI-----NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           ++ F  + R  +      N + +        + T V  L++  V ++ L    A   L+ 
Sbjct: 197 LVGFARYSRDQSFATLARNRRFVLVMAAGSAVGTFVGGLLLGIVPEAVLLPGLAAILLIS 256

Query: 138 GILMLK 143
              + +
Sbjct: 257 AWKVWR 262


>gi|227509712|ref|ZP_03939761.1| membrane protein [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227190862|gb|EEI70929.1| membrane protein [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 252

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 75/203 (36%), Gaps = 17/203 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++    FL+G +  + G GGGL+ +P              + +H A+GT+    A  +
Sbjct: 4   FIIVCPLVFLAGFVDAIAG-GGGLISLPAYLM--------TGMPVHFAIGTNKLSSAMGT 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V++ ++  R G + + +    +    + +   S +  HV   +     AI   +  I +L
Sbjct: 55  VVATLKFARSGYLRLGLSIFTVIAAILGSSTGSQLALHVSDFYFRIILAIVLPVTAIYLL 114

Query: 143 KRDR-------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYK 194
              +       +          +      V G   G  G G G F  LL+       I  
Sbjct: 115 TNKKALGAAGFVQTGISNRQMVIAAAISFVIGGYDGFYGPGTGTFLILLLTGLDHLPINV 174

Query: 195 ATATSAGVSALIAFPALLVRIYS 217
           A  T+  ++      AL V +++
Sbjct: 175 AAGTTKVINLTTNITALAVFLFN 197


>gi|153000721|ref|YP_001366402.1| hypothetical protein Shew185_2199 [Shewanella baltica OS185]
 gi|151365339|gb|ABS08339.1| protein of unknown function DUF81 [Shewanella baltica OS185]
          Length = 252

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 80/261 (30%), Gaps = 35/261 (13%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D   L+ +++  +   +  FG+GGG++++ V+++      I             L  +  
Sbjct: 14  DIFALLTLSAAFTSFFTACFGIGGGVMLLGVMAQVLPPQLIIP-----------LHGVVQ 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                         I  +++  +     +  ++ S+++  +  S +    A+F L     
Sbjct: 63  LGSNGGRAALGWRHIEWRLIAAFFPGAILGALLGSVVLVALPPSVMYLTIAVFILYSCW- 121

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG----GIFTNLLMLFYGASIYKAT 196
                     +           G +T F+S   G  G           +  +      A 
Sbjct: 122 -----GPKLPKMVFGTLGTLAAGAITTFISLFAGATGPLVAAFIKQFEVDRFRTVATFAM 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A S      I     +      W              +  ++ ++    + T +  K+  
Sbjct: 177 AMSLQHGVKIVVFEGMGVSLVDW--------------LPLLVCMILSGTIGTWIGFKMLK 222

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            +  K+    FS+++   +  
Sbjct: 223 RVADKHFQTAFSIVLTLLAIR 243


>gi|46581361|ref|YP_012169.1| hypothetical protein DVU2958 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120601462|ref|YP_965862.1| hypothetical protein Dvul_0412 [Desulfovibrio vulgaris DP4]
 gi|46450783|gb|AAS97429.1| membrane protein, putative [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120561691|gb|ABM27435.1| protein of unknown function DUF81 [Desulfovibrio vulgaris DP4]
 gi|311235019|gb|ADP87873.1| protein of unknown function DUF81 [Desulfovibrio vulgaris RCH1]
          Length = 332

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G ++G+FG+G G   VPVL+           + + VA+GTS  +++ T   + 
Sbjct: 218 LLLFIIIGIMAGMFGLGAGWANVPVLNLLM-------GVPLKVAVGTSKFLLSITDTSAA 270

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +   G +   +    I  L + +VV   +++     F+        +  G   L +
Sbjct: 271 WVYLNQGCVIPLMAIPSIVGLMLGSVVGVRLLAVAKPKFIRYMVIGVLIFAGAKALLK 328



 Score = 42.8 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 94/283 (33%), Gaps = 48/283 (16%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++   F+ G ++ L GVGGG++ VP++S  F          +    G  L V    ++
Sbjct: 61  TTLLFFCFILGIIAVLAGVGGGVLFVPLVSGFFPF-------HLDFVRGAGLLVALAGAL 113

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +     +    ++++      +     +V +++   +  + +        L +  L+L 
Sbjct: 114 AAGPGLLKRNLASLRLALPVALIASSCAIVGAMLGLALPTNIVQIFLGATILFIACLLLF 173

Query: 144 RDRLYCERKFPDNYVKYIWG----------------------------MVTGFLSGALGV 175
                       + +    G                            ++ G ++G  G+
Sbjct: 174 SKNSVRPEVKQQDAIGLALGLQGAFIEPTTGETVEWKTHRTLPGLLLFIIIGIMAGMFGL 233

Query: 176 GGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           G G     ++ L  G  +  A  TS  + ++    A  V +  G  +  +         I
Sbjct: 234 GAGWANVPVLNLLMGVPLKVAVGTSKFLLSITDTSAAWVYLNQGCVIPLMA--------I 285

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            +++ ++  S+    +  +L  +   K++      ++      
Sbjct: 286 PSIVGLMLGSV----VGVRLLAVAKPKFIRYMVIGVLIFAGAK 324


>gi|39934768|ref|NP_947044.1| hypothetical protein RPA1698 [Rhodopseudomonas palustris CGA009]
 gi|39648618|emb|CAE27139.1| DUF81 [Rhodopseudomonas palustris CGA009]
          Length = 247

 Score = 47.0 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 92/257 (35%), Gaps = 29/257 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++I  +   G +SGL G G  LV     S  F L     ++ + + +  S+     ++
Sbjct: 6   LIILIAGALCGGFVSGLSGFGLALV-----SLGFWLYVFPPTVAVPLVLLCSMAS-QAST 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +    +H     I+ K++  ++       +  S+++++ D         +F L      +
Sbjct: 60  MRMVWQH-----IDFKLVTPFLIGGLAGVIPGSVLVAYADPWGFKLFVGLFLL------I 108

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---YGASIYKATATS 199
               LY        +       V G++ G +G   G+     +L+    G   ++     
Sbjct: 109 FPPALYFTPPMALTFGGRWMDGVIGWIGGVMGGFAGLSGPPPILWASVRGWDKHQRRGVF 168

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
              ++ +   AL ++   G     +         + A ++ LP  +L   L  +  + + 
Sbjct: 169 QAFNSTVLIAALALQTAHGLVTRDV---------LYAAVLALPAILLGAWLGARNYHALS 219

Query: 260 KKYLTIGFSMIMFTTSF 276
            +        ++F +  
Sbjct: 220 DRSFRNVVLALLFLSGL 236


>gi|225569753|ref|ZP_03778778.1| hypothetical protein CLOHYLEM_05847 [Clostridium hylemonae DSM
           15053]
 gi|225161223|gb|EEG73842.1| hypothetical protein CLOHYLEM_05847 [Clostridium hylemonae DSM
           15053]
          Length = 279

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 7/163 (4%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             +  H A+ T+       + ++     R+  IN+K+    IF     + + S +   V 
Sbjct: 71  AGLPPHAAVATNKMSSPFGTALATYRFARNHLINVKLAVPSIFAAVAGSFIGSHISLLVP 130

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY------VKYIWGMVTGFLSGALGVG 176
           +  +     I   L   L+L +                          + G   G  G G
Sbjct: 131 EKVMAYVLVIILPLSAFLVLNKKLFNDSGAEEVTLDGRTYITAVAAAFIIGGYDGFYGPG 190

Query: 177 -GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            G        +F   SI  A A +  ++      +L++ + +G
Sbjct: 191 TGTFLIIAFTIFAKLSIKTANAQAKVINLTTNVTSLIIFLLNG 233


>gi|160931519|ref|ZP_02078914.1| hypothetical protein CLOLEP_00351 [Clostridium leptum DSM 753]
 gi|156869390|gb|EDO62762.1| hypothetical protein CLOLEP_00351 [Clostridium leptum DSM 753]
          Length = 140

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 41/99 (41%), Gaps = 4/99 (4%)

Query: 54  KAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV 113
                +G++      +A G +L    P++V++ + + R   I+ K       +      +
Sbjct: 30  YLTLFLGMEQG----IAQGVNLIFFIPSAVIALIVYSRKKMIDWKAAIPAAVLGVAGAWL 85

Query: 114 TSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
            + + S +D  +L+K F    L+MG++ L   +      
Sbjct: 86  GTYLSSLIDGYWLSKLFGGLLLIMGVMQLFYKKEKGGDS 124


>gi|217973332|ref|YP_002358083.1| hypothetical protein Sbal223_2158 [Shewanella baltica OS223]
 gi|217498467|gb|ACK46660.1| protein of unknown function DUF81 [Shewanella baltica OS223]
          Length = 252

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 82/262 (31%), Gaps = 35/262 (13%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           VD   L+ +++  +   +  FG+GGG++++ V+++      I             L  + 
Sbjct: 13  VDIFALLTLSAAFTSFFTACFGIGGGVMLLGVMAQVLPPQLIIP-----------LHGVV 61

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                          I  +++  +     +  ++ S+++  +  S +    A F L    
Sbjct: 62  QLGSNGGRAALGWHYIEWRLIAAFFPGAILGALLGSVVLVALPPSVMYLTIAAFILYSCW 121

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG----GIFTNLLMLFYGASIYKA 195
                      +           G +T F+S   G  G         L +  +      A
Sbjct: 122 ------GPKLPKMVLGTLGTLAAGAITTFISLFAGATGPLVAAFIKQLEVDRFRTVATFA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            A S    A I     +    + W                 ++ ++    + T +  K+ 
Sbjct: 176 MAMSLQHGAKIVVFEGMGVSLANW--------------WPLLVCMMLSGTVGTWIGFKML 221

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
             +  K+    FS+++   +  
Sbjct: 222 KRVADKHFQTAFSIVLTLLAIR 243


>gi|49475941|ref|YP_033982.1| hypothetical protein BH12270 [Bartonella henselae str. Houston-1]
 gi|49238749|emb|CAF28009.1| hypothetical protein BH12270 [Bartonella henselae str. Houston-1]
          Length = 306

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 110/307 (35%), Gaps = 56/307 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + ++I    ++G  SGLFG+GGG ++ P+L           +I   +
Sbjct: 1   MSIYLPIAEMSLNMLILIGMGVVAGFFSGLFGIGGGFLITPLLIFY--------NIPPAI 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+GT    +  +SV   + H R  T+++K+         + ++V   + S + K      
Sbjct: 53  AVGTGANQMIASSVTGAITHFRRRTLDIKLGILLAIGGGVGSLVGIQIFSVLKKLGQLDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            ++  + +    +G LM+                                + R      +
Sbjct: 113 MISFLYVLLLGSVGSLMIIESWRDMLRQRKAQKVNTRLIGRHNWIHRLPLKMRFRTSMIY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G++ G LS  +G+GGG F    +++           TS      ++    +
Sbjct: 173 ISIIPVLGIGLIVGLLSSVMGIGGGFFMIPALIYLLRVPTSVVIGTSLFQITFVSSFTTV 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           ++  +   ++           + A L++L  SI      T+    +  + L +  + ++ 
Sbjct: 233 LQSVTNQSVDI----------VLAFLLMLGGSI-GAQYGTRAGRKLKAEQLRLALACLVL 281

Query: 273 TTSFVFA 279
                 A
Sbjct: 282 IVCMRLA 288


>gi|167758494|ref|ZP_02430621.1| hypothetical protein CLOSCI_00834 [Clostridium scindens ATCC 35704]
 gi|167663690|gb|EDS07820.1| hypothetical protein CLOSCI_00834 [Clostridium scindens ATCC 35704]
          Length = 253

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 75/215 (34%), Gaps = 16/215 (7%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  +    ++    FL+G +  + G GGGL+ +P    A         +  H A+ T+  
Sbjct: 2   ELTIHTFIIVCPLVFLAGMVDAIAG-GGGLISLPAYLIA--------GLPSHAAVATNKM 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                + ++      +  IN+++    +    I + + S +   V +  +         L
Sbjct: 53  SSPFGTALATYRFAHNHLINVRLAVPSVMAAIIGSFIGSHVSLMVPEKVMAYVLVAVLPL 112

Query: 137 MGILM----LKRDRLYCERKFPDNYVKY--IWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
              L+    L  D+   E            I   V G   G  G G G        +F  
Sbjct: 113 SAFLVLNKKLFNDKGSNEVTLNKRTYLTASIAAFVIGCYDGFYGPGTGTFLIIAFTVFAR 172

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            SI  A A +  ++      +LL+ + +G  +  L
Sbjct: 173 LSIKTANAQAKAINLTTNITSLLIFLLNGQVIISL 207


>gi|330976488|gb|EGH76539.1| hypothetical protein PSYAP_07554 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 123

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 34/84 (40%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             + M   + TSL VIA  S+ S +     G ++  +   +     I  V+   +  ++ 
Sbjct: 40  SDLDMKSVVATSLAVIALVSMGSVITASLSGVMHWAVGAPFALGAVIGLVIGRQVARYLA 99

Query: 123 KSFLNKAFAIFCLLMGILMLKRDR 146
              L + FA+  ++   ++    R
Sbjct: 100 GPRLQQLFAVCGIVAAFMLALSVR 123


>gi|295103968|emb|CBL01512.1| Predicted permeases [Faecalibacterium prausnitzii SL3/3]
          Length = 257

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 69/205 (33%), Gaps = 16/205 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +  +++ +  +G +    G GGGL+ +P    A         +  H    T+    A  
Sbjct: 9   MMAFLMLMTGFAGFVDSAAG-GGGLISLPAYLFA--------GLPPHYTYATNKFSAACG 59

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  +     + G +N+K+           + + + ++  +    L     I   +  +++
Sbjct: 60  TTFATASFFKSGAMNVKVGVLAAIGSFAGSALGAHIVLLLSDEMLRTMMFIILPVAAVII 119

Query: 142 LKRDRLYCER------KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYK 194
           L +  L  E             +    G+  G   G +G G G F  +      G  +  
Sbjct: 120 LWQRNLPDENRDDGTLDLKKILLALAIGLGIGLYDGVMGPGTGTFAIIAFTTLMGFDLRT 179

Query: 195 ATATSAGVSALIAFPALLVRIYSGW 219
           A      ++    + +L   + +G 
Sbjct: 180 ANGNGKVLNLASNYASLFTYLMNGL 204


>gi|167580822|ref|ZP_02373696.1| hypothetical protein BthaT_21885 [Burkholderia thailandensis TXDOH]
 gi|257138143|ref|ZP_05586405.1| hypothetical protein BthaA_02814 [Burkholderia thailandensis E264]
          Length = 264

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 58/270 (21%), Positives = 95/270 (35%), Gaps = 33/270 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  ++    G L GL GVGGG +M P+L   F       ++    A+GT L   A T  
Sbjct: 8   LLYSLSGVFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAAITKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI------SHVDKSFLNKAFAIFCLLM 137
                H   GT+  +I             +T  ++      S      +        LL 
Sbjct: 61  TGTFVHGLKGTVEWRITGRLAAGSVPAAAITLWLLHSHGMHSQATSRMIQLVLGAALLLT 120

Query: 138 GILMLKRDRLYC-----ERKFPDNYVKYIW-----GMVTGFLSGALGVGGGIFTNLLMLF 187
            + +L R +L        R  P +  + +      G V G L     VG G     ++L 
Sbjct: 121 SLSLLFRPQLAAFAAKRTRALPPSPARTLAATVLTGAVLGVLVSLTSVGAGAIGVTVLLL 180

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
               +Y A +T+  V + IA    L        + G+  W LG V+   ++ +L  S+  
Sbjct: 181 ----LYPALSTTRIVGSDIAHAVPLTL------VAGVGHWMLGSVDWAILVSLLIGSVPG 230

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             + + LS    +  L    +  +      
Sbjct: 231 IVVGSHLSTRAPEGLLRRILATTLVAVGAK 260



 Score = 42.4 bits (99), Expect = 0.080,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 6/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  L  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 153 VLTGAVLGVLVSLTSVGAGAIGVTVLLLLY------PALSTTRIVGSDIAHAVPLTLVAG 206

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + H   G+++  IL   +       VV S + +   +  L +  A   + +G  ++  
Sbjct: 207 VGHWMLGSVDWAILVSLLIGSVPGIVVGSHLSTRAPEGLLRRILATTLVAVGAKLVLS 264


>gi|188583248|ref|YP_001926693.1| hypothetical protein Mpop_4036 [Methylobacterium populi BJ001]
 gi|179346746|gb|ACB82158.1| protein of unknown function DUF81 [Methylobacterium populi BJ001]
          Length = 263

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 90/261 (34%), Gaps = 25/261 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +  +   + ++GT+  + G GGGL+ VP L     L G+D       A+ T+    + 
Sbjct: 6   ETVAGLFGVAVVAGTVDAIAG-GGGLLTVPALL----LAGLDPVS----AIATNKLQGSA 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            SV + +   R G I  +          + +V  +L +S + +  L+    +  + +   
Sbjct: 57  GSVSATLAFARRGLIRWREAGPAALGAGLASVAGALCVSLLPRPLLDALVPLLLIGIAGY 116

Query: 141 MLKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKAT 196
                R+  E                   GF  G  G G G F     +   G  + +AT
Sbjct: 117 FATARRMSNEDAAARITPGLFAVTLAPAVGFYDGVFGPGAGSFYMIGFVTLLGLGVVRAT 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +   +A     +L +                G V     L +   + L   + + L+ 
Sbjct: 177 AHTKLSNAASNLGSLALFTLQ------------GAVIWPIGLAMAVGAFLGAQIGSVLAV 224

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            +G + +     +I    +  
Sbjct: 225 RLGARLIRPLLVVIACAMALR 245


>gi|163781622|ref|ZP_02176622.1| hypothetical protein HG1285_02028 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882842|gb|EDP76346.1| hypothetical protein HG1285_02028 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 304

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 8/114 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A F+   +S   GVGGG ++VP +            + M +  GTS   I  T ++S 
Sbjct: 181 VLAGFVVAIVSSALGVGGGFLLVPFMVSVM-------GLPMFLVPGTSALSILITMLVSA 233

Query: 87  MEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             + + G  I++++L   I  + I + V   +   + +  L        L +GI
Sbjct: 234 GNYLKLGAQIDIQLLGIEIVGIVIGSFVGPHLSKVLKEKKLRLILGFLLLYIGI 287



 Score = 42.8 bits (100), Expect = 0.056,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 71/231 (30%), Gaps = 53/231 (22%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
              G +    G  GG++          + GI  +  + +     +      SV S+   R
Sbjct: 20  VFVGLVFSTVGAAGGIL---AGVGHISVFGIPQANNIKLMNQILIFTSTLISVPSYWRQR 76

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL------NKAFAIFCLLMGILMLKR 144
           R       ++     +L + ++  +L+ S +   FL         F IF L++ + +   
Sbjct: 77  R-------VIVILGVLLGVGSIAGALIGSTLSYKFLPDLKSYKPLFGIFTLIVALKIFYD 129

Query: 145 DRLYCERKFP------------------------------------DNYVKYIWGMVTGF 168
                +++                                      +  V  + G V   
Sbjct: 130 TFHKKKKEQIKDIEESIKERGASDLTTKKVSLTSIELEFLGKTYSFNPLVPVLAGFVVAI 189

Query: 169 LSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           +S ALGVGGG      M+   G  ++    TSA    +    +    +  G
Sbjct: 190 VSSALGVGGGFLLVPFMVSVMGLPMFLVPGTSALSILITMLVSAGNYLKLG 240


>gi|325917839|ref|ZP_08180018.1| putative permease [Xanthomonas vesicatoria ATCC 35937]
 gi|325535950|gb|EGD07767.1| putative permease [Xanthomonas vesicatoria ATCC 35937]
          Length = 271

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 75/215 (34%), Gaps = 13/215 (6%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           +   +  + +   +  ++  +F++G +    G GGGL+ +P L                +
Sbjct: 10  MRSAVLLELIPTELPWLLCIAFVAGLVDAAVG-GGGLIQLPGLFATLPQQ------APSL 62

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
            +GT+       +  S   + R+     + +          + + +  +S + K  +   
Sbjct: 63  ILGTNKFSAMFGTGASAWRYARNVRFPWRPVLYATAAAFTFSFLGATAVSLLPKQAVRPL 122

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVG-GGIFTNL 183
             +  + M +  L +       +  +   +        G   GF  G  G G G     L
Sbjct: 123 ILLLLIAMLLYTLIKKDFGALHRPREIGRRELITALAMGAAIGFYDGFFGPGTGSFLIFL 182

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            + F+G    +A+A +  V+      AL   + SG
Sbjct: 183 FIRFFGLDFLRASAAAKVVNLATNLAALSFFLPSG 217


>gi|325569223|ref|ZP_08145428.1| protein of hypothetical function DUF81 [Enterococcus casseliflavus
           ATCC 12755]
 gi|325157472|gb|EGC69632.1| protein of hypothetical function DUF81 [Enterococcus casseliflavus
           ATCC 12755]
          Length = 258

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 93/262 (35%), Gaps = 24/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  +   L+  L  + G+GGG+++ P     F  +G      +     T++  ++  S 
Sbjct: 4   LIYFLVIVLANALGAVSGMGGGVLIKP----IFDFIGAHSVAAISFYSATAVFTMSIVST 59

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------LNKAFAIFCLL 136
              +   R   IN  I         +  V+ ++    +   F       L +       L
Sbjct: 60  ARQLASGRK--INWSIALWVSGGAVLGGVLGNVAFERLLLVFRDDKMVQLIQILVTVLTL 117

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           +   +  +                  G++ GFL+  LG+GGG     LLML +   I +A
Sbjct: 118 LFAFLYTKYNWR-GFALKKVGWYAACGLILGFLASLLGIGGGPINVSLLMLLFAMPIKEA 176

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           T  S           +L   ++            G  ++  +  ++P +I+   L  K S
Sbjct: 177 TIYSICTIFFSQLAKILTIAFTTG---------FGAYDLQILWFVIPAAIVGGLLGAKAS 227

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
            ++  + +T+ F  ++     +
Sbjct: 228 NVLSPQRVTLVFQTVIVLVLLI 249



 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 47/125 (37%), Gaps = 10/125 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +        + G L+ L G+GGG + V +L   F       ++ +  A   S+  I  + 
Sbjct: 136 VGWYAACGLILGFLASLLGIGGGPINVSLLMLLF-------AMPIKEATIYSICTIFFSQ 188

Query: 83  VMSFMEHRR---HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           +   +        G  +++IL   I    +  ++ +   + +    +   F    +L+ +
Sbjct: 189 LAKILTIAFTTGFGAYDLQILWFVIPAAIVGGLLGAKASNVLSPQRVTLVFQTVIVLVLL 248

Query: 140 LMLKR 144
           + L  
Sbjct: 249 INLYN 253


>gi|260221341|emb|CBA29806.1| hypothetical protein Csp_A14000 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 263

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 89/260 (34%), Gaps = 36/260 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
              ++A F  G++ GL GVGGG +M P+L   F        +  ++A+GT L   A T +
Sbjct: 4   LAYVLAGFFVGSIVGLTGVGGGSLMTPILIFFF-------GVKPYMAVGTDLLFAAFTKM 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVV----------TSLMISHVDKSFLNKAFAIF 133
              ++  R   I+  ++ +         ++          TS  + H+  + L  A  + 
Sbjct: 57  GGTVKLARSRHIDWPVVLNLSAGSIPAALITLYVLHELGATSTAVQHIMTTTLGFALLLT 116

Query: 134 CLLMGILMLKRDR---------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
                   ++                 +     +  ++G + G L     VG G     +
Sbjct: 117 AAATLYKAIRGKTGPKTIAAGHEAAAARPRHWSLPLLFGALIGTLVTLTSVGAGAIGVTV 176

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           ++               +       A +        + G+   SLG V+   +  +L  S
Sbjct: 177 LMLLYP----------LLPLPRIVAADIAYAVPLTLVAGMGHASLGSVDWPMLAKLLAGS 226

Query: 245 ILITPLATKLSYMIGKKYLT 264
           +    + + L +   ++ + 
Sbjct: 227 LPGIWVGSHLMFKTPERVIR 246


>gi|167618923|ref|ZP_02387554.1| hypothetical protein BthaB_21609 [Burkholderia thailandensis Bt4]
          Length = 264

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 58/270 (21%), Positives = 95/270 (35%), Gaps = 33/270 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  ++    G L GL GVGGG +M P+L   F       ++    A+GT L   A T  
Sbjct: 8   LLYSLSGVFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAAITKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI------SHVDKSFLNKAFAIFCLLM 137
                H   GT+  +I             +T  ++      S      +        LL 
Sbjct: 61  TGTFVHGLRGTVEWRITGRLAAGSVPAAAITLWLLHSHGMHSQATSRMIQLVLGAALLLT 120

Query: 138 GILMLKRDRLYC-----ERKFPDNYVKYIW-----GMVTGFLSGALGVGGGIFTNLLMLF 187
            + +L R +L        R  P +  + +      G V G L     VG G     ++L 
Sbjct: 121 SLSLLFRPQLAAFAAKRTRALPPSPARTLAATVLTGAVLGVLVSLTSVGAGAIGVTVLLL 180

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
               +Y A +T+  V + IA    L        + G+  W LG V+   ++ +L  S+  
Sbjct: 181 ----LYPALSTTRIVGSDIAHAVPLTL------VAGVGHWMLGSVDWAILVSLLIGSVPG 230

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             + + LS    +  L    +  +      
Sbjct: 231 IVVGSHLSTRAPEGLLRRILATTLVAVGAK 260



 Score = 42.4 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 6/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  L  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 153 VLTGAVLGVLVSLTSVGAGAIGVTVLLLLY------PALSTTRIVGSDIAHAVPLTLVAG 206

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + H   G+++  IL   +       VV S + +   +  L +  A   + +G  ++  
Sbjct: 207 VGHWMLGSVDWAILVSLLIGSVPGIVVGSHLSTRAPEGLLRRILATTLVAVGAKLVLS 264


>gi|323137459|ref|ZP_08072537.1| protein of unknown function DUF81 [Methylocystis sp. ATCC 49242]
 gi|322397446|gb|EFX99969.1| protein of unknown function DUF81 [Methylocystis sp. ATCC 49242]
          Length = 327

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 60/173 (34%), Gaps = 12/173 (6%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI--NMKILKDWIFVL 107
           P+L  AFQ   ++  I       TSL V+  +++         G +  N  I+ + +   
Sbjct: 98  PLLIGAFQFAALEAVIVNK---ATSL-VVVASALPFRAAAVPLGGVAANWPIVLNLLAGS 153

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK-----RDRLYCERKFPDNYVKYIW 162
            +   + +   + +  + L +  A   + +  L+L                         
Sbjct: 154 LLGAWLGAGWATRLKSTTLYRVIAPLLVGVAALLLFGHDQQGGGPALATGNLQLVAGVAA 213

Query: 163 GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
           G + G ++  LGV GG +    L+L +G  I  A + S  VS           
Sbjct: 214 GFIIGVVASLLGVAGGELLIPTLVLLFGVDIKLAGSLSLAVSLPTMIVGFTRY 266



 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 47/102 (46%), Gaps = 8/102 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +   + A F+ G ++ L GV GG +++P L   F        + + +A   SL V  PT 
Sbjct: 207 LVAGVAAGFIIGVVASLLGVAGGELLIPTLVLLF-------GVDIKLAGSLSLAVSLPTM 259

Query: 83  VMSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           ++ F  + R      ++  + ++ V+ + ++V + +   +  
Sbjct: 260 IVGFTRYSRDRSFAILRESRAFVLVMALGSIVGTFLGGQLLG 301


>gi|167750385|ref|ZP_02422512.1| hypothetical protein EUBSIR_01359 [Eubacterium siraeum DSM 15702]
 gi|167656536|gb|EDS00666.1| hypothetical protein EUBSIR_01359 [Eubacterium siraeum DSM 15702]
          Length = 119

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 8/117 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+   L+G  + + G+GGG +           + +   I   +A G +L    P +++S 
Sbjct: 3   ILVGILTGATASM-GLGGGFI-------LLVYLSVFTEIPQDIAQGINLLFFLPIALLSL 54

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + H ++   ++K++  ++ +     V  S +    D + L K F IF L +GI  L 
Sbjct: 55  VIHIKNKLTDLKLVGKYLILGLPCAVAGSYVAGITDVAVLRKLFGIFVLYIGINQLY 111


>gi|187932091|ref|YP_001892076.1| hypothetical protein FTM_1472 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187713000|gb|ACD31297.1| conserved hypothetical membrane protein [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 258

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 85/200 (42%), Gaps = 15/200 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMHVAMGTSLGVIAPTS 82
             I+   FL+  +  + G GGGL+ +P LS     ++ +  +     ++GT + V     
Sbjct: 14  VFIVSMGFLASFIDAIAG-GGGLISIPALSLTGLPIVTVLGTNKFQASIGTGMAV----- 67

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               +++ + G I++KI+   +    I     +L+   +   F+N   +I  + + I  +
Sbjct: 68  ----LKYYKSGLIDIKIVVRGLVAGFIGACCGTLLTLLIHNDFMNNIVSILLIAVFIFSI 123

Query: 143 KRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATAT 198
               L     +++  +     ++G + G   G  G G G    + ++++ G +  +A+  
Sbjct: 124 VNKNLGVAQGKKRMSEVAFFTLFGFILGAYDGFFGPGTGNLWIIAIVYFLGYTFLQASGY 183

Query: 199 SAGVSALIAFPALLVRIYSG 218
           +  ++      +L V   SG
Sbjct: 184 AKMLNLKSNVFSLTVFALSG 203


>gi|161617556|ref|YP_001591521.1| hypothetical protein SPAB_05415 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161366920|gb|ABX70688.1| hypothetical protein SPAB_05415 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 270

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 12/134 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I   ++A F  G ++ L GV GG +++P +   F          + +A   SL +  
Sbjct: 144 IATIIAGVIAGFFIGNVAALLGVAGGELLIPTIVILFGAD-------IKLAGSLSLMISL 196

Query: 80  PTSVMSFMEHRRHGTINM-----KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           PT ++ F  +       +     K+    +    I   +  LM+       L        
Sbjct: 197 PTMIVGFSRYTNADAFQILRKEKKLFVWMVIGSVIGAAIGGLMLGMFPVRVLMTLLGAVL 256

Query: 135 LLMGILMLKRDRLY 148
           L+  I   K  R  
Sbjct: 257 LISAIKTFKHTRQR 270



 Score = 37.0 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 65/191 (34%), Gaps = 16/191 (8%)

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD 155
           ++ I+ + +    I     +     + + +L++   +  +++  +ML    +        
Sbjct: 79  HLDIVINLLAGSLIGAWWAAGRAIKMSRIWLDRTILLLLVILSFVMLSEAWMPLHDNSAG 138

Query: 156 NYVKYIWGMVTGFLSG--------ALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALI 206
            +   I  ++ G ++G         LGV GG +    +++ +GA I  A + S  +S   
Sbjct: 139 LFQPGIATIIAGVIAGFFIGNVAALLGVAGGELLIPTIVILFGADIKLAGSLSLMISLPT 198

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
                     +           L        + ++  S++   +   +  M   + L   
Sbjct: 199 MIVGFSRYTNADAFQILRKEKKL-------FVWMVIGSVIGAAIGGLMLGMFPVRVLMTL 251

Query: 267 FSMIMFTTSFV 277
              ++  ++  
Sbjct: 252 LGAVLLISAIK 262


>gi|160942561|ref|ZP_02089808.1| hypothetical protein FAEPRAM212_00036 [Faecalibacterium prausnitzii
           M21/2]
 gi|158446145|gb|EDP23148.1| hypothetical protein FAEPRAM212_00036 [Faecalibacterium prausnitzii
           M21/2]
          Length = 257

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 69/205 (33%), Gaps = 16/205 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +  +++ +  +G +    G GGGL+ +P    A         +  H    T+    A  
Sbjct: 9   MMAFLMLMTGFAGFVDSAAG-GGGLISLPAYLFA--------GLPPHYTYATNKFSAACG 59

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  +     + G +N+K+           + + + ++  +    L     I   +  +++
Sbjct: 60  TTFATANFFKSGAMNVKVGVLAAIGSFAGSALGAHIVLLLSDEMLRTMMFIILPVAAVII 119

Query: 142 LKRDRLYCER------KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYK 194
           L +  L  E             +    G+  G   G +G G G F  +      G  +  
Sbjct: 120 LWQRNLPDENRDDGTLDLKKILLALAIGLGIGLYDGVMGPGTGTFAIIAFTTLMGFDLRT 179

Query: 195 ATATSAGVSALIAFPALLVRIYSGW 219
           A      ++    + +L   + +G 
Sbjct: 180 ANGNGKVLNLASNYASLFTYLMNGL 204


>gi|91762038|ref|ZP_01264003.1| putative transmembrane permease [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91717840|gb|EAS84490.1| putative transmembrane permease [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 360

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 49/121 (40%), Gaps = 8/121 (6%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           ++   L +   K  + + I   I+   + G ++ + G+GG  ++VP +    +       
Sbjct: 156 IHGLPLRMRFPKSKLYESIFTPIIIGLVVGFIAAIMGIGGAFILVPAMIYIIK------- 208

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEH-RRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           +   +  GTSL V    SV+    H    G+I++ ++   +    +       +   +D 
Sbjct: 209 MPTKLVPGTSLFVTIFVSVIVTFLHSINFGSIDLMLVFMLVIGSIVGVQAGQKLGEKIDS 268

Query: 124 S 124
           S
Sbjct: 269 S 269


>gi|92116535|ref|YP_576264.1| hypothetical protein Nham_0948 [Nitrobacter hamburgensis X14]
 gi|91799429|gb|ABE61804.1| protein of unknown function DUF81 [Nitrobacter hamburgensis X14]
          Length = 259

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 95/256 (37%), Gaps = 25/256 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L + +  L G + GL G GG ++ VP+L     +         HVA+GTS   +A +++
Sbjct: 5   ALAVGSGTLVGFVLGLIGGGGSILAVPLLVYVVGVQ------STHVAIGTSAVAVALSAL 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + H R G +       +     +   + S +    D   L   F +  +++ + ML+
Sbjct: 59  SSLVAHARAGNVRWPCALVFAACGIVGAGLGSTIGKSFDGQQLLFLFGLLMIVIALSMLR 118

Query: 144 RDRLYCERKFP--------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYK 194
             R   +   P              ++G   G L+G  G+GGG      ++      +  
Sbjct: 119 GPRGEIKGFVPLTRENAAAVAPRLAVFGGGAGLLAGFFGIGGGFLVVPGLVAGARMPLLG 178

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A  +S                 SG     L            VL  +  S+    +A +L
Sbjct: 179 AIGSSLVSVFAFGLTTAANYALSGLIDWQLVVLF--------VLGGIAGSLFGGRIAARL 230

Query: 255 SYMIGKKYLTIGFSMI 270
           +    K+ L+I F++I
Sbjct: 231 ASQ--KRTLSIVFAVI 244


>gi|168334145|ref|ZP_02692354.1| hypothetical protein Epulo_04350 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 262

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 84/262 (32%), Gaps = 21/262 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++   L ++    + T+  + G+GGG+++ PVL                + + +S  V +
Sbjct: 1   MEIGILYLLIGLSASTVGAISGLGGGVIIKPVLDF------FGHYDMATIGILSSCTVFS 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-------KSFLNKAFAI 132
              V    +     T   K L    F       +   +    D          +      
Sbjct: 55  MAIVSLAKKFMSKATFEYKKLLSLSFGAIAGGFIGKYIFDIFDNLIPETNAKIIQSVLLA 114

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
             +   +L     +        + ++    G+V G +S  LG+GGG     L++   +  
Sbjct: 115 LLMFSILLFNIFKKKIKTFNTSNIFICLTAGIVMGTISAFLGIGGGPVNVALIIILFSCN 174

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            K  A  +  +   +  + L       G         G  ++     ++   I    L  
Sbjct: 175 AKDAAIYSIFTIFFSQISTLGTTLFTVG--------FGAYDLSTAPYMIFGGIAGGFLGD 226

Query: 253 KLSYMIGKKYLTIGFSMIMFTT 274
           K S  +  K +   FS+IM   
Sbjct: 227 KFSKKLTSKQVEKLFSLIMIVV 248


>gi|15643144|ref|NP_228187.1| hypothetical protein TM0376 [Thermotoga maritima MSB8]
 gi|170288354|ref|YP_001738592.1| hypothetical protein TRQ2_0555 [Thermotoga sp. RQ2]
 gi|4980880|gb|AAD35463.1|AE001717_9 conserved hypothetical protein [Thermotoga maritima MSB8]
 gi|170175857|gb|ACB08909.1| protein of unknown function DUF81 [Thermotoga sp. RQ2]
          Length = 241

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 84/200 (42%), Gaps = 12/200 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L+ +   L+G L+ L G GG ++ +P+L+           + + VA GT+   I   
Sbjct: 1   MIVLVFLGGILAGFLNVLAG-GGSMITLPILTAL--------GLGIDVANGTNRIAIILQ 51

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++++    +    + +K          +  ++ S +   ++K  L K   +  L+M + +
Sbjct: 52  NLVAIERFKAKKVLKIKEAILVALPAIVGAILGSSIAVQIEKEMLQKIVGVIFLVMAVSL 111

Query: 142 LKRDRLYCERKFPDN--YVKYIWGMVTGFLSGALGVGGGI-FTNLLMLFYGASIYKATAT 198
           + + R++ E +F      + YI   + G   G +  G G      + L  G  + K  A 
Sbjct: 112 VWKPRIWLEDRFVKRNWVLIYIVFFLIGIYGGFIQAGVGFLLMPAIALLLGYELVKTNAV 171

Query: 199 SAGVSALIAFPALLVRIYSG 218
              + A     +L++ I +G
Sbjct: 172 KVFIVASYNIISLVIFILNG 191


>gi|16127094|ref|NP_421658.1| hypothetical protein CC_2862 [Caulobacter crescentus CB15]
 gi|221235891|ref|YP_002518328.1| permease [Caulobacter crescentus NA1000]
 gi|13424476|gb|AAK24826.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|220965064|gb|ACL96420.1| putative permease [Caulobacter crescentus NA1000]
          Length = 257

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 56/157 (35%), Gaps = 5/157 (3%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           HVA+GTS   +A  + +  +   + G +       +     + +++ + +   V+   L 
Sbjct: 44  HVAIGTSAAAVAVNAAVGLLAQAKAGRVKWPCALTFGAPGLVGSLLGAHLAKAVNGQHLL 103

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI-----FTN 182
             FA+    +G+ M +      +     +  K +  +  G  +G      GI        
Sbjct: 104 VWFALAMAAVGLSMFRAPGSPGDPDVQIDPAKAMRLVPVGAATGLAAGFFGIGGGFLIAP 163

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            LM   G ++  A A+S     +      L    SG 
Sbjct: 164 GLMAATGMTLANAAASSLVSVTMFGAATSLSYAASGL 200


>gi|324998679|ref|ZP_08119791.1| hypothetical protein PseP1_07927 [Pseudonocardia sp. P1]
          Length = 285

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP +   F          +HVA GTSL +  P S++  + H R GT + +  +       
Sbjct: 191 VPAMVLLF-------GTDLHVAAGTSLLMFIPNSIVGTVVHLRQGTASGRWGRLLAVTAA 243

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             TV  + +   +D   L   F  F   M + 
Sbjct: 244 PGTVAGAALGLSLDAVVLGLVFGTFATAMAVR 275


>gi|255280827|ref|ZP_05345382.1| putative membrane protein [Bryantella formatexigens DSM 14469]
 gi|255268764|gb|EET61969.1| putative membrane protein [Bryantella formatexigens DSM 14469]
          Length = 264

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 92/267 (34%), Gaps = 27/267 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              + +  SF +  +  + G+GGG+++ P+L       G+     +    G ++  +   
Sbjct: 5   LYVIFLAVSFGASVVGAICGIGGGVLIKPLL----DAFGVLSVSSISFLSGCTVLSM--- 57

Query: 82  SVMSFMEHRRHGT--INMKILKDWIFVLPITTVVTSLMISHVDKSF--------LNKAFA 131
           S  S ++ +  G   ++MK          +  V   +M  ++   F        +     
Sbjct: 58  SCYSVVKAKLSGDSLVDMKTGTPLAIGAALGGVAGKMMFQYLTDMFTDKDQVGAIQAICL 117

Query: 132 IFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT-NLLMLFYGA 190
           +      +L   R          +       G+V G  S  LG+GGG     +L  F+  
Sbjct: 118 LLITFGTMLYTIRKDKIKTHHVKNIAACIAIGLVLGICSSFLGIGGGPINLVVLFFFFSM 177

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
                  T+A  S  I   + +  + +      +P +S+       +++++   IL    
Sbjct: 178 DTK----TAAQNSLYIILFSQITSLINTLVTRTVPEFSV-----ILLVLMVAGGILGGMA 228

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              ++  I    +   F  +M     +
Sbjct: 229 GRAINKKIDGSVVNRLFIGLMGVIMLI 255


>gi|120603871|ref|YP_968271.1| hypothetical protein Dvul_2833 [Desulfovibrio vulgaris DP4]
 gi|120564100|gb|ABM29844.1| protein of unknown function DUF81 [Desulfovibrio vulgaris DP4]
 gi|311232474|gb|ADP85328.1| protein of unknown function DUF81 [Desulfovibrio vulgaris RCH1]
          Length = 415

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 46/290 (15%), Positives = 105/290 (36%), Gaps = 66/290 (22%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I     +G ++G  G GGG ++ P L        +   +   +A+GT L  I   ++M  
Sbjct: 78  IAVGLAAGLITGCIGAGGGFIITPAL--------MAAGVKGILAVGTDLFHIFAKAIMGT 129

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMIS-------HVDKSFLNKAFAIFCLLMGI 139
             H++ G +++K+   ++      T +   +          + + F++  +A+    +G 
Sbjct: 130 TVHKKLGNVSVKLAVFFLIGSGGGTFIGGAINKGLYNKDPLLSELFISTIYAVLLGFLGF 189

Query: 140 LML---------------------------------------KRDRLYCERKFPDNYVKY 160
             L                                         + L    +    ++  
Sbjct: 190 YALYDFIKASRAGGGGDAHGGGSGTTAISVKLQGMNVPPMITFDEDLVPGGRRISGWIVA 249

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
             G+V G L+  +GVGGG  T  + ++             GVS++      +++I    G
Sbjct: 250 AGGVVVGILAAIMGVGGGFVTFPMFVYI-----------FGVSSMTTVGTDILQIIFTAG 298

Query: 221 LNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           L  +  +++ GFV     + +L  S+L   +    + ++   ++   +++
Sbjct: 299 LGAIAQYAIYGFVFYTLAMGMLLGSLLGIQIGALTTKVVKGIHIRGFYAV 348



 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 42/118 (35%), Gaps = 8/118 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++     + G L+ + GVGGG V  P+    F        +     +GT +  I  T+ 
Sbjct: 246 WIVAAGGVVVGILAAIMGVGGGFVTFPMFVYIF-------GVSSMTTVGTDILQIIFTAG 298

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +  +     +G +   +    +    +   + +L    V    +   +A+  +   I 
Sbjct: 299 LGAIAQYAIYGFVFYTLAMGMLLGSLLGIQIGALTTKVVKGIHIRGFYAVSIIAGFIN 356


>gi|317121649|ref|YP_004101652.1| hypothetical protein Tmar_0810 [Thermaerobacter marianensis DSM
           12885]
 gi|315591629|gb|ADU50925.1| protein of unknown function DUF81 [Thermaerobacter marianensis DSM
           12885]
          Length = 128

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 8/124 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
                + +  +G LSGL  +GGG       S     + +   +  HVA G  L      +
Sbjct: 12  FPWAALVAGATGILSGL-SIGGG-------SLLVPALVLLLDVPQHVAQGVVLATFPAVA 63

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++   H R G +  ++         +   + + +     ++ L + F ++ + +G+  L
Sbjct: 64  LVAAWIHWRQGFLRWQLALRVTAGSALGAWLGARLGIGAPEALLRRLFGLYLVAIGLYAL 123

Query: 143 KRDR 146
            R R
Sbjct: 124 YRSR 127


>gi|307823172|ref|ZP_07653402.1| protein of unknown function DUF81 [Methylobacter tundripaludum
           SV96]
 gi|307735947|gb|EFO06794.1| protein of unknown function DUF81 [Methylobacter tundripaludum
           SV96]
          Length = 269

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 88/260 (33%), Gaps = 47/260 (18%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR-RHGTINMKILKDWIF 105
           +M P+L   F            VA+GT L   A T       H  +H +++ KI+     
Sbjct: 26  LMTPLLVFLFGF-------KPAVAVGTDLLFAAITKTGGVWVHHNKHSSVDWKIVGWLAL 78

Query: 106 VLPITTVVTSLMISH---------------VDKSFLNKAFAIFCLLMGILMLKRDRL-YC 149
                 + T  ++ H               +  + L  AF++    + +    + +    
Sbjct: 79  GSIPFALATLFVLKHFMEVGKETTGAITFTLGVALLLTAFSLIVRSVLLSRAAKLKPIDD 138

Query: 150 ERKFPDNYVKY---------IWGMVTGFLSGALGVGGGIFTNLLMLFY--GASIYKATAT 198
           E   P+N  ++         + G V G L     VG G    + +LF     +  K   T
Sbjct: 139 EHSTPENAGRFKHLQIPATVLIGAVLGILVTLSSVGAGALGTVALLFLYPRMTTLKIVGT 198

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
               +  +              + GL   SLG V++  +  +L  S+    + + LS  I
Sbjct: 199 DLAHAIPLT------------AVAGLGHLSLGNVDLVLLGSLLIGSLPGIWIGSHLSAKI 246

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
            ++ L    + I+      F
Sbjct: 247 PERILRPILASILLLIGLKF 266



 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 46/122 (37%), Gaps = 6/122 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   ++   + G L  L  VG G +    L   +  M           +GT L    P +
Sbjct: 154 IPATVLIGAVLGILVTLSSVGAGALGTVALLFLYPRM------TTLKIVGTDLAHAIPLT 207

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++ + H   G +++ +L   +        + S + + + +  L    A   LL+G+  +
Sbjct: 208 AVAGLGHLSLGNVDLVLLGSLLIGSLPGIWIGSHLSAKIPERILRPILASILLLIGLKFV 267

Query: 143 KR 144
            +
Sbjct: 268 LQ 269


>gi|295675666|ref|YP_003604190.1| protein of unknown function DUF81 [Burkholderia sp. CCGE1002]
 gi|295435509|gb|ADG14679.1| protein of unknown function DUF81 [Burkholderia sp. CCGE1002]
          Length = 262

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 87/270 (32%), Gaps = 35/270 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V+    G L GL GVGGG +M P+L   F       ++    A+GT L   A T  
Sbjct: 8   LLYSVSGLFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAIFCLLM 137
              + H   G+++ ++             +T +++             +        L+ 
Sbjct: 61  TGTLVHGLKGSVDWQVTLRLAAGSVPAATITLILLHRYGMDTPGAGRLIQVVLGAALLVT 120

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY- 188
            I ++ R         +L    +     +  + G + G L     VG G     ++L   
Sbjct: 121 AIALVFRPQLAALGARKLRAPSQGRTLALTMLTGAILGALVSLTSVGAGAIGVTVLLLLY 180

Query: 189 -GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                 +   +    +  +              L G   W LG ++   +L +L  S+  
Sbjct: 181 PMLPTTRIVGSDIAHAVPLTL------------LAGAGHWLLGSIDWSMLLSLLVGSLPG 228

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             + + L+    +  L    +  +      
Sbjct: 229 IAIGSYLASRAPEVLLRNLLAATLTLVGVR 258



 Score = 40.8 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 47/122 (38%), Gaps = 6/122 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L ++   + G L  L  VG G + V VL   + ++     +   +A         P +
Sbjct: 147 LALTMLTGAILGALVSLTSVGAGAIGVTVLLLLYPMLPTTRIVGSDIAHA------VPLT 200

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++   H   G+I+  +L   +        + S + S   +  L    A    L+G+ ++
Sbjct: 201 LLAGAGHWLLGSIDWSMLLSLLVGSLPGIAIGSYLASRAPEVLLRNLLAATLTLVGVRLV 260

Query: 143 KR 144
             
Sbjct: 261 LS 262


>gi|168208035|ref|ZP_02634040.1| putative membrane protein [Clostridium perfringens E str. JGS1987]
 gi|168213771|ref|ZP_02639396.1| putative membrane protein [Clostridium perfringens CPE str. F4969]
 gi|170660665|gb|EDT13348.1| putative membrane protein [Clostridium perfringens E str. JGS1987]
 gi|170714755|gb|EDT26937.1| putative membrane protein [Clostridium perfringens CPE str. F4969]
          Length = 258

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 101/259 (38%), Gaps = 19/259 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + +  + + LS     + G+GGG+++ PVL       G  +   + V    ++  +A  
Sbjct: 1   MVLIYFLVALLSTICGSMAGLGGGVIIKPVLDFL----GDYNIETIGVLSACTIFSMALV 56

Query: 82  SVMSFMEHRRH------GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
           SV+  + ++        G + +  +   +    + T +  ++   +     +   A+  +
Sbjct: 57  SVIKQLSYKSKIDIKNTGLLGIGSVLGGLLGQKLLTFILKIVQGRIVSLVQSGILALLLI 116

Query: 136 LMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
            + I M  +++     K  +  +  I G+  G ++  LG+GGG      +  + +   K 
Sbjct: 117 FVYIYMNNKEKFK-SYKIDNFILSTIIGIFLGLIAAFLGIGGGPINVAFLTIFFSMEAKN 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            A  + +  L +  + L+ I  G G +G         ++  +  ++   +L   +  K +
Sbjct: 176 AARDSVLIILFSQASKLLTIAFGTGFSGY--------DLSMLPYMIFGGVLGGFIGAKFN 227

Query: 256 YMIGKKYLTIGFSMIMFTT 274
            +   + +   F+ I    
Sbjct: 228 RIFSNEIILRVFNTITILI 246


>gi|148652543|ref|YP_001279636.1| hypothetical protein PsycPRwf_0733 [Psychrobacter sp. PRwf-1]
 gi|148571627|gb|ABQ93686.1| hypothetical protein PsycPRwf_0733 [Psychrobacter sp. PRwf-1]
          Length = 220

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 58/185 (31%), Gaps = 12/185 (6%)

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
            I+  + K ++    I   + +L+ S +D +++     +F +       K  ++      
Sbjct: 38  AIDWSLTKYYVPSAIIGAWLAALVFSRLDANWIQLLVGVFLVSTIFQ-YKFGKVSKTFDM 96

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
           P        G +  F+S  +G  G I     M   G       AT    S  +    +  
Sbjct: 97  P-KVGFIPLGFIVAFMSTLVGGLGPILNPFYMNA-GLEKENLIATKTANSFFVGIVQIGS 154

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
             + G     L             L++   +++   +  +    +      I   ++M  
Sbjct: 155 YSFFGVITAKL---------WVYGLVLGLGAVIGNIIGKRFLAGMSISQFRIMLLILMVI 205

Query: 274 TSFVF 278
           +  V 
Sbjct: 206 SGIVM 210


>gi|281411611|ref|YP_003345690.1| protein of unknown function DUF81 [Thermotoga naphthophila RKU-10]
 gi|281372714|gb|ADA66276.1| protein of unknown function DUF81 [Thermotoga naphthophila RKU-10]
          Length = 241

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 84/200 (42%), Gaps = 12/200 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L+ +   L+G L+ L G GG ++ +P+L+           + + VA GT+   I   
Sbjct: 1   MIVLVFLGGILAGFLNVLAG-GGSMITLPILTAL--------GLGIDVANGTNRIAIILQ 51

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++++    +    + +K          +  ++ S +   ++K  L K   +  L+M + +
Sbjct: 52  NLVAIERFKAKKVLKIKEAILVALPAIVGAILGSSIAVQIEKEMLQKIVGVIFLVMAVSL 111

Query: 142 LKRDRLYCERKFPDN--YVKYIWGMVTGFLSGALGVGGGI-FTNLLMLFYGASIYKATAT 198
           + + R++ E +F      + YI   + G   G +  G G      + L  G  + K  A 
Sbjct: 112 VWKPRIWLEDRFVKRNWVLIYIVFFLIGVYGGFIQAGVGFLLMPAIALLLGYELVKTNAV 171

Query: 199 SAGVSALIAFPALLVRIYSG 218
              + A     +L++ I +G
Sbjct: 172 KVFIVASYNIISLVIFILNG 191


>gi|254293294|ref|YP_003059317.1| hypothetical protein Hbal_0926 [Hirschia baltica ATCC 49814]
 gi|254041825|gb|ACT58620.1| protein of unknown function DUF81 [Hirschia baltica ATCC 49814]
          Length = 306

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 46/294 (15%), Positives = 95/294 (32%), Gaps = 57/294 (19%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +II      G +SGLFGVGGG ++ P+L  A         +   VA+ T    +  TS+
Sbjct: 15  LVIIAIGAGVGFVSGLFGVGGGFLLTPLLMFA--------GVPAVVAVSTQANQVLATSI 66

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLMG 138
                H ++  +++++    +      + +   +   +         +  ++ +F   +G
Sbjct: 67  AGASSHWKNRAVDIRMGLFMMSGGLAGSGLGVWVFKLLKASGNIDEVIAISYVLFLGTIG 126

Query: 139 ILML--------------------------------KRDRLYCERKFPDNYVKYIWGMVT 166
            LM                                  + R      +       + G   
Sbjct: 127 GLMFWESIGPAIGNKSDGNKDPKRRSAMRAWTRALPFKRRFPRSGLYISMIPPVLIGFFV 186

Query: 167 GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           GFL+  LGVGGG      M++  G        TS  +  +I   A +  + +        
Sbjct: 187 GFLAAVLGVGGGFILAPAMVYLLGVPTRVMVGTS--LFQIIFLTAFVTFLQAAVNQT--- 241

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                 V++    +++   ++   L       +    L    ++++       A
Sbjct: 242 ------VDLVLAAVLMSGGVVGAKLGAATGQYLNAAQLRFLLALVVLAMGGKLA 289


>gi|298736375|ref|YP_003728901.1| hypothetical protein HPB8_880 [Helicobacter pylori B8]
 gi|298355565|emb|CBI66437.1| conserved hypothetical protein [Helicobacter pylori B8]
          Length = 255

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 73/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  +A
Sbjct: 1   MDIYALYIAIGLFTGILSGIFGI--------GGGLIIVPIMLATGHSFEESIGISILQMA 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFVLKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDFIADTKRYPLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       +Y 
Sbjct: 173 KCVALGLFFILFSSISGAFSLMYH 196


>gi|254471976|ref|ZP_05085377.1| permease [Pseudovibrio sp. JE062]
 gi|211959178|gb|EEA94377.1| permease [Pseudovibrio sp. JE062]
          Length = 309

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 8/104 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  I       G L  + G+GGG +MVP L    +       +  ++ +GTSL  I  T 
Sbjct: 175 VIPIFGIGSSIGFLGSVLGIGGGFMMVPALIYLLR-------VPANIVIGTSLLQILATM 227

Query: 83  VMSFMEHRRH-GTINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
            ++   H  +  ++++ +    +    I     + +   +    
Sbjct: 228 AVATFLHAINTQSVDIVLALTLMIGGVIGAQFGAQVGQGMRGEH 271



 Score = 43.1 bits (101), Expect = 0.045,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 92/286 (32%), Gaps = 56/286 (19%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + +I       G LSGLFG+GGG ++ P+L       GI  +    V
Sbjct: 1   MQIYLPIAELPINVFMIFAMGGTVGFLSGLFGIGGGFLLTPLLIF----SGIPPA----V 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KS 124
           ++ T    I  +S    + + R   I+ K+    +    I + +   +   +        
Sbjct: 53  SVATVTTQIVASSASGVLSYWRKAGIDFKLAGVLLCSGVIGSALGVWIFGILQRLGQLDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            ++ A+  F   +G+LML                                + R    + +
Sbjct: 113 VISLAYVTFLGTIGVLMLGESMKAIMRRKSGKEPAGRRPGQHNWVHGLPFKVRFRRSKLY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                 +  G   GFL   LG+GGG      +++           TS          A  
Sbjct: 173 VSVIPIFGIGSSIGFLGSVLGIGGGFMMVPALIYLLRVPANIVIGTSLLQILATMAVATF 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +   +              V+I   L ++   ++      ++   +
Sbjct: 233 LHAINTQS-----------VDIVLALTLMIGGVIGAQFGAQVGQGM 267


>gi|154249287|ref|YP_001410112.1| hypothetical protein Fnod_0600 [Fervidobacterium nodosum Rt17-B1]
 gi|154153223|gb|ABS60455.1| protein of unknown function DUF81 [Fervidobacterium nodosum
           Rt17-B1]
          Length = 245

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 104/261 (39%), Gaps = 25/261 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + L+     ++G ++ L G GG  + +P+LS           +   VA  T+   I   
Sbjct: 3   MLVLLFFGGLVAGIINVLAG-GGSFLTLPLLSLY--------GLAPSVANATNRIGILLQ 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ +     ++  +  K          +  +V + ++  + ++ +  +  I  L+M   +
Sbjct: 54  NISATGSFVKNKVLEPKRAGFLAIPTILGGIVGTSIVLKLPENIIKISVGIIFLVMSYFV 113

Query: 142 LKRDRLYCERK---FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATA 197
           L   +++ E K     + ++ +I   + G   G +  G G F    +    G +I  A A
Sbjct: 114 LFSPKVWEEGKKDVKENKFLSFIVFFLIGLYGGYIQAGVGFFLIYALTMVEGYNIKSANA 173

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
               ++ L    +LL+   +G  +  +P            +++   S +   + + L+  
Sbjct: 174 MKIFLTLLFTIFSLLLF-SAGKKVEFVPG-----------IVMGLGSFVGGYVGSYLNMK 221

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           + KK + I  +++M  ++  +
Sbjct: 222 VNKKIIRIIVAVMMIISAISY 242


>gi|72163483|ref|YP_291140.1| membrane permease [Thermobifida fusca YX]
 gi|71917215|gb|AAZ57117.1| conserved hypothetical membrane permease protein [Thermobifida
           fusca YX]
          Length = 261

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 78/222 (35%), Gaps = 23/222 (10%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
             +     + +  A+  SL V+  +S    +   R G +  ++   +           S 
Sbjct: 29  PALVYGVGLPLTAAIPASLVVVGASSATGLLTRIRAGLVRWRVALVFGLAGLPAAFGGSA 88

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE--RKFPDN-------YVKYIWGMVTG 167
           +   +   +L  AFA   +++ + ML++        R                + G + G
Sbjct: 89  VGRLLPNHWLMLAFAALMVVVAVRMLRQSTPAVGACRGASGTVDWRACLPWATLAGALVG 148

Query: 168 FLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           FL+G  GVGGG      +    G +  +A ATS  V  L +   L     +  GL+    
Sbjct: 149 FLTGLFGVGGGFVIVPALSLGLGLAESEAVATSLAVIVLNSVSGLAAHSLTPTGLD---- 204

Query: 227 WSLGFVNIGAVLIILPISILITPLAT-KLSYMIGKKYLTIGF 267
                    A + +   S + T LA   L+  +    L  GF
Sbjct: 205 --------VATVGVFAASAMATSLAAGTLAPRLPAAALRRGF 238


>gi|317178964|dbj|BAJ56752.1| hypothetical protein HPF30_0655 [Helicobacter pylori F30]
          Length = 255

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 73/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  +A
Sbjct: 1   MDIYALYIAIGLFTGILSGIFGI--------GGGMIIVPIMLATGHSFEESIGISILQMA 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFILKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVVKPKKKDFIADTKRYHLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       IY 
Sbjct: 173 KCVALGLFFILFSSISGAFSLIYH 196


>gi|241668550|ref|ZP_04756128.1| hypothetical protein FphipA2_07276 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254877085|ref|ZP_05249795.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254843106|gb|EET21520.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 280

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 81/259 (31%), Gaps = 43/259 (16%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM-SFMEHRRHGTINMKILKDWIF 105
           V+ P+LS          ++ +H A+G SL  I  TS   S +  + HG    K+      
Sbjct: 32  VITPLLSTIL-------NVPLHYAIGASLVAIICTSTATSLVSLKSHGLTKEKLGMFLAL 84

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY----- 160
              I  +  + +   +    L   F     ++ +L   + +     +             
Sbjct: 85  ATAIGAIFGAKLALTLKSQALFLIFGGILFVVAVLSFVKKKQNSTIQESTKISVIAEKLQ 144

Query: 161 -------------------IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
                              I G +  F+S       G      +L  GA I+K  A    
Sbjct: 145 LNDSITVNKLKQQYNVRHPILGFI--FMS-------GAGFIGGLLGIGAGIFKVIAMDKV 195

Query: 202 VSALIAFPALLVRIYSGWGLNGLPP--WSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           +       A       G          +  G+++      +   ++L   + +K+   I 
Sbjct: 196 MKIPFKVSASTSNFIMGITAFAATSTYYFAGYIDSSITAPVALGTLLGATIGSKIMPHIS 255

Query: 260 KKYLTIGFSMIMFTTSFVF 278
            + L + F +++F ++   
Sbjct: 256 TRVLRLTFFIVLFISALQM 274



 Score = 43.1 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           I   V+  TS  ++  T+  +   +   G I+  I         +   + S ++ H+   
Sbjct: 198 IPFKVSASTSNFIMGITAFAATSTYYFAGYIDSSITAPVALGTLLGATIGSKIMPHISTR 257

Query: 125 FLNKAFAIFCLLMGILMLKR 144
            L   F I   +  + M+ +
Sbjct: 258 VLRLTFFIVLFISALQMIIK 277


>gi|238059521|ref|ZP_04604230.1| hypothetical protein MCAG_00487 [Micromonospora sp. ATCC 39149]
 gi|237881332|gb|EEP70160.1| hypothetical protein MCAG_00487 [Micromonospora sp. ATCC 39149]
          Length = 320

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 72/214 (33%), Gaps = 15/214 (7%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A  T       T+++S   H R G ++  +++             +  +S +  +     
Sbjct: 56  ASATVHLAEIGTTLVSGAAHWRFGNVDWTVVRRVGVPGAFGAFAGATFLSSLSTATAAPI 115

Query: 130 FAIFCLLMGILMLKRDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
            ++  L +G+ +L R  +    +               G+V GF+    G G G      
Sbjct: 116 MSLILLTLGVYVLVRFTVSGLPRGRVGLPLRKRFLGPLGLVAGFVDATGGGGWGPVGTPA 175

Query: 185 MLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           +L  G     +   +      L+A  A    +  G G           ++ G V  +L  
Sbjct: 176 ILASGRLEPRRVIGSIDTSEFLVAIAASAGFLV-GIGSEN--------IDFGWVGALLLG 226

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            ++  P+A  L  M+  + L      ++  T+  
Sbjct: 227 GMIAAPIAAWLVRMVPPRVLGSAVGGVIILTNVR 260


>gi|145501808|ref|XP_001436884.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124404029|emb|CAK69487.1| unnamed protein product [Paramecium tetraurelia]
          Length = 424

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 9/121 (7%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +   LI V+ F +G +SGL  +G GL+MVPVL +          +   +A  TS      
Sbjct: 284 NRFILIYVSGFFAGLISGLLALGAGLIMVPVLLEL--------GLHPRIATATSAFNYFF 335

Query: 81  TSVMSFMEHRRHGTINM-KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             + + ++      I++ +I   +   L   T+     +  ++K  L      F +L+ I
Sbjct: 336 IGLTNIVKLITDSQISIAEIAWFFGLALVFGTICCHFSLKLIEKLQLVHLVIYFTILLAI 395

Query: 140 L 140
           L
Sbjct: 396 L 396



 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 8/120 (6%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           + Y+ G   G +SG L +G G+    ++L  G     ATATSA     I    ++  I  
Sbjct: 288 LIYVSGFFAGLISGLLALGAGLIMVPVLLELGLHPRIATATSAFNYFFIGLTNIVKLITD 347

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    W  G       L ++  +I     + KL   +   +L I F++++   +F+
Sbjct: 348 SQISIAEIAWFFG-------LALVFGTICC-HFSLKLIEKLQLVHLVIYFTILLAILNFI 399


>gi|32470157|ref|NP_863381.1| hypothetical protein R64_p026 [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|20521525|dbj|BAB91589.1| ycfA [Salmonella enterica subsp. enterica serovar Typhimurium]
          Length = 270

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 12/134 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I   ++A F  G ++ L GV GG +++P +   F          + +A   SL +  
Sbjct: 144 IATIIAGVIAGFFIGNVAALLGVAGGELLIPTIVILFGAD-------IKLAGSLSLMISL 196

Query: 80  PTSVMSFMEHRRHGTINM-----KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           PT ++ F  +       +     K+    +    I   +  LM+       L        
Sbjct: 197 PTMIVGFSRYTNADAFQILRKEKKLFVWMVIGSVIGAAIGGLMLGMFPVRVLMTLLGAVL 256

Query: 135 LLMGILMLKRDRLY 148
           L+  I   K  R  
Sbjct: 257 LISAIKTFKHTRQR 270



 Score = 37.0 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 65/191 (34%), Gaps = 16/191 (8%)

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD 155
           ++ I+ + +    I     +     + + +L++   +  +++  +ML    +        
Sbjct: 79  HLDIVINLLAGSLIGAWWAAGRAIKMSRIWLDRTILLLLVILSFVMLSEAWMPLHDSSAG 138

Query: 156 NYVKYIWGMVTGFLSG--------ALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALI 206
            +   I  ++ G ++G         LGV GG +    +++ +GA I  A + S  +S   
Sbjct: 139 LFQPGIATIIAGVIAGFFIGNVAALLGVAGGELLIPTIVILFGADIKLAGSLSLMISLPT 198

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
                     +           L        + ++  S++   +   +  M   + L   
Sbjct: 199 MIVGFSRYTNADAFQILRKEKKL-------FVWMVIGSVIGAAIGGLMLGMFPVRVLMTL 251

Query: 267 FSMIMFTTSFV 277
              ++  ++  
Sbjct: 252 LGAVLLISAIK 262


>gi|126663456|ref|ZP_01734453.1| hypothetical protein FBBAL38_08909 [Flavobacteria bacterium BAL38]
 gi|126624404|gb|EAZ95095.1| hypothetical protein FBBAL38_08909 [Flavobacteria bacterium BAL38]
          Length = 253

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 94/263 (35%), Gaps = 25/263 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I  + +ASF++G +  + G GGGL+  P             ++ +   +GT        
Sbjct: 5   IIIFLCIASFIAGFIDAIVG-GGGLIQTPAALILL------PNVSVASIIGTLKIPGFSG 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + M+   + +   +N K+      V  I   + S +++ +   F+     +  +L+ +  
Sbjct: 58  TSMATYHYLKSAKVNWKLFIVMAIVSFIFAYLGSSLLNVMQNDFMKPLLFVILILLLLYT 117

Query: 142 LKRDRL-YCERKFPDNYVKYIWGMVT----GFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
             +      +         YI+G V     GF  G +G G G    +  +   G    KA
Sbjct: 118 YFKKDFGQFQIDKLTTKQTYIYGSVICVFLGFYDGFIGPGTGSLLIMAFIAILGFDFLKA 177

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
              +  V+      ++ + +  G             +     + +   ++  + L  KL+
Sbjct: 178 NIYAKLVNLATNIGSITLFVLKGK------------IIWTIAIPMAICNVTGSWLGAKLA 225

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
              G  ++ I F +++      F
Sbjct: 226 ISKGNGFIRIFFLIVVGLALLRF 248


>gi|254515720|ref|ZP_05127780.1| hypothetical protein NOR53_3412 [gamma proteobacterium NOR5-3]
 gi|219675442|gb|EED31808.1| hypothetical protein NOR53_3412 [gamma proteobacterium NOR5-3]
          Length = 254

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/253 (13%), Positives = 85/253 (33%), Gaps = 20/253 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+  A  ++G L+ + G GG L+ VP++            +    A GT+   I   +
Sbjct: 12  LALLTGAGIIAGALNVIAG-GGSLMTVPIMLFL--------GLSGPEANGTNRISIIAQN 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++     R G    ++            ++ +++   +D  + ++  AI  + + +LM 
Sbjct: 63  IVAVRTFFRRGFSEFRLSLTLSAAAIPGAILGAMVGVQLDGEWFDRVLAIVMIGVLVLMQ 122

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG--GGIFTNLLMLFYGASIYKATATSA 200
              + +     P    + I G V        G G  GG     +       +++      
Sbjct: 123 MPGKQHDTGGMPLTRKRLILGHVL-----MFGAGCWGGFIQVGVGFILMPILHRVMGLDL 177

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
             + +      L        +          ++    L +   + L      + S   G+
Sbjct: 178 VRTNMHKVFIALTYNLFAIVVFAAAVS----IHWQFGLALAVGNSLGGYFGARFSVQGGE 233

Query: 261 KYLTIGFSMIMFT 273
            ++    ++++  
Sbjct: 234 VWIRRIVTVVLLI 246


>gi|326795950|ref|YP_004313770.1| hypothetical protein Marme_2703 [Marinomonas mediterranea MMB-1]
 gi|326546714|gb|ADZ91934.1| protein of unknown function DUF81 [Marinomonas mediterranea MMB-1]
          Length = 253

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 92/258 (35%), Gaps = 34/258 (13%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  +  + L+I   F++G ++ L G GG  + +P L     +MG+       +A  T+  
Sbjct: 2   DYSIFTVSLLIGTGFIAGIINTLAG-GGSNLTLPALM----VMGMPAD----IANATNRV 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   ++ + +  ++   I+ + +   +    +  VV +   S+  +++L        + 
Sbjct: 53  GVVLQNLAATIGFKKAKKIDSQDILPVMIPSLLGGVVGAFAASYAPETWLKPLLLSAMIG 112

Query: 137 MGILMLKRD----------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
           M I+M+ +                 K       ++ G+  GF+   +G    I    L  
Sbjct: 113 MTIIMIVKPAMIAPPEGTIPFKVSEKPSAWCALFVAGVYGGFVQAGVGF---ILIAALAG 169

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
                + +  A     +      AL V I++              V     LI+   ++ 
Sbjct: 170 SLRYDLVRTNALKMVCTLGFTVLALAVFIWNDQ------------VLWVPGLILACGTMC 217

Query: 247 ITPLATKLSYMIGKKYLT 264
              +A KL+      +L 
Sbjct: 218 GAHVAVKLAIKANPNHLK 235


>gi|297379873|gb|ADI34760.1| Uncharacterized 27.4 kDa protein in cobO 3'region [Helicobacter
           pylori v225d]
          Length = 255

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 73/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  +A
Sbjct: 1   MDIYALYIAIGLFTGILSGIFGI--------GGGMIIVPIMLATGHSFEESIGISILQMA 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFILKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDFIADIKRYHLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       IY 
Sbjct: 173 KCVALGLFFILFSSISGAFSLIYH 196


>gi|225848665|ref|YP_002728828.1| membrane protein [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644741|gb|ACN99791.1| membrane protein [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 340

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 51/132 (38%), Gaps = 8/132 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT- 81
           I L     F SG L+ + G+GGG ++ P L              +  A+  S+  +    
Sbjct: 165 IFLPAFIGFSSGFLAAVMGIGGGNLITPALMYL-------GGYEVISAVSISIFQMVFVA 217

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S ++F     +  +++ +    I       V  +++   V+K ++    A+  +++    
Sbjct: 218 SFLAFFHSYVNHGVDIVLTVILILGSSFGAVFGAVLGQKVNKFYIKMMLAVLMIVVASYS 277

Query: 142 LKRDRLYCERKF 153
           L +      ++ 
Sbjct: 278 LYQLIKAPPKEV 289


>gi|126460029|ref|YP_001056307.1| hypothetical protein Pcal_1421 [Pyrobaculum calidifontis JCM 11548]
 gi|126249750|gb|ABO08841.1| protein of unknown function DUF81 [Pyrobaculum calidifontis JCM
           11548]
          Length = 288

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 97/293 (33%), Gaps = 53/293 (18%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            VV +  L+ VAS + G ++ + GVGGG+V  P++    Q+        +  A G  L +
Sbjct: 2   DVVIFEGLLFVASLVIGVVAAMAGVGGGVVFTPLMLAFTQM-----DTTVIRAAG--LAL 54

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-------KSFLNKAF 130
              TS     ++   G   + ++      + +  V  +L+  HV        ++ +    
Sbjct: 55  TMTTSAFGGRKYFLAGAARLNLVLFTSLFMSLGVVTGALVGIHVVKSLGKAGEAIIRLTL 114

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYI--------------------------WGM 164
            +    + ++ML       + +      +                               
Sbjct: 115 GVLLFFIVLIMLTVKPREVKSEASGWSRRLGLYGAFKDPATGEEVSYTAQRLLPTAFALF 174

Query: 165 VTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
             G + GA G+G G     +L L  G  I  A ATS     +   P L   ++ G     
Sbjct: 175 GVGLIGGAFGLGAGWALVPVLNLITGLPIKIAVATSTSTFIVANAPGLWAYVHEGVATP- 233

Query: 224 LPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                   V   A++ +   S     +  +L+     + + +    +M   + 
Sbjct: 234 -------LVLAPALVGVAIGS----NIGARLALKAKARVIRLVVISVMLIAAA 275


>gi|15606628|ref|NP_214008.1| hypothetical protein aq_1462 [Aquifex aeolicus VF5]
 gi|2983855|gb|AAC07409.1| hypothetical protein aq_1462 [Aquifex aeolicus VF5]
          Length = 296

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 44/96 (45%), Gaps = 8/96 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++A F+   +S   GVGGG ++VP +    +       + M++  GTS   +  T+ 
Sbjct: 181 ILPVLAGFVVAVISSALGVGGGFLLVPFMVSVLK-------VPMYLVPGTSAFAVLITTT 233

Query: 84  MSFMEHRRHGTIN-MKILKDWIFVLPITTVVTSLMI 118
           +S + + + G +   K++      + + + +   + 
Sbjct: 234 ISMLNYIKLGAVVYWKVIFAEALGVIVGSFIGPHIS 269



 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 73/230 (31%), Gaps = 44/230 (19%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +   + GT+    G  GG++          L GI+ +  + V    +  ++  ++++S 
Sbjct: 20  FIWGIVVGTVFSTVGAAGGIL---AGFGHISLFGINVANSVKV---MNQILVIISTLISV 73

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMI-SHVDK-SFLNKAFAIFCLLMGILMLKR 144
             + + G +   +         I  +V S +  +++         F IF L++   +   
Sbjct: 74  PTYWKQGRLIFILGGLLGIGSVIGAIVGSTLSYTYLSGLKAYKFLFGIFTLIVAFKVFHD 133

Query: 145 DRLYCERKFPD-----------------------------------NYVKYIWGMVTGFL 169
             +    +                                        +  + G V   +
Sbjct: 134 VFVKERERVKSIDKDLKEGKERRVKVLKRSMKEVEFSFLGKKYSFNPILPVLAGFVVAVI 193

Query: 170 SGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           S ALGVGGG      M+      +Y    TSA    +    ++L  I  G
Sbjct: 194 SSALGVGGGFLLVPFMVSVLKVPMYLVPGTSAFAVLITTTISMLNYIKLG 243


>gi|317121648|ref|YP_004101651.1| hypothetical protein Tmar_0809 [Thermaerobacter marianensis DSM
           12885]
 gi|315591628|gb|ADU50924.1| protein of unknown function DUF81 [Thermaerobacter marianensis DSM
           12885]
          Length = 172

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 7/93 (7%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L       G+ D    H A GTS+ V+  TS++S   +   G ++  +         +
Sbjct: 84  PALVY---WFGVPD----HRAHGTSILVVGLTSLISAWVYASRGMVDPSLALQVAAGGMV 136

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              + +  +  +    L + +  F L++G+ ML
Sbjct: 137 GAALGAWWMERLRPRVLRRVYGGFLLILGLRML 169


>gi|261885239|ref|ZP_06009278.1| inner membrane protein YfcA [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 130

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 54/131 (41%), Gaps = 9/131 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  L+   +  SG +  + G GGGL+ +P+L        I   I  H+A+ T+    +  
Sbjct: 7   HYALLFFVACFSGFVDAIAG-GGGLITIPIL--------ISVGIPEHIALATNKLQSSFG 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + +     G IN K +   +    I  V+ ++ +  +D   L+    IF  L  +  
Sbjct: 58  SFTATLNFSLKGYINYKDIWIGVVFTFIGAVLGTICVLVIDPKILSYLIPIFLDLSILYT 117

Query: 142 LKRDRLYCERK 152
               ++  + +
Sbjct: 118 DFSPKIGEKDR 128


>gi|323524876|ref|YP_004227029.1| hypothetical protein BC1001_0507 [Burkholderia sp. CCGE1001]
 gi|323381878|gb|ADX53969.1| protein of unknown function DUF81 [Burkholderia sp. CCGE1001]
          Length = 262

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 85/270 (31%), Gaps = 35/270 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V+    G L GL GVGGG +M P+L   F       ++    A+GT L   A T  
Sbjct: 8   LLYSVSGLFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAIFCLLM 137
              + H   G+++ ++             VT L++             +        L+ 
Sbjct: 61  TGTLVHGLKGSVDWQVTLRLAAGSVPAATVTLLLLHRYGMDTPGASRLIQLVLGAALLVT 120

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY- 188
            + ++ R         R     +     +  + G V G L     VG G     ++L   
Sbjct: 121 AVALVFRPQLAALGAHRRRPPSQGRTLALTMLTGAVLGMLVSLTSVGAGAIGVTVLLLLY 180

Query: 189 -GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                 +   +    +  +              L G   W LG V+   +L +L  S+  
Sbjct: 181 PMLPTMRIVGSDIAHAVPLTL------------LAGAGHWLLGSVDWSMLLSLLIGSLPG 228

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             + + LS       L    +  +      
Sbjct: 229 IAVGSMLSTRAPDALLRNLLAATLTLVGLR 258



 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 51/120 (42%), Gaps = 6/120 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L ++   + G L  L  VG G + V VL   + ++       M + +G+ +    P +
Sbjct: 147 LALTMLTGAVLGMLVSLTSVGAGAIGVTVLLLLYPMLP-----TMRI-VGSDIAHAVPLT 200

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++   H   G+++  +L   +        V S++ +    + L    A    L+G+ ++
Sbjct: 201 LLAGAGHWLLGSVDWSMLLSLLIGSLPGIAVGSMLSTRAPDALLRNLLAATLTLVGLRLV 260


>gi|134294894|ref|YP_001118629.1| hypothetical protein Bcep1808_0782 [Burkholderia vietnamiensis G4]
 gi|134138051|gb|ABO53794.1| protein of unknown function DUF81 [Burkholderia vietnamiensis G4]
          Length = 262

 Score = 46.6 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 93/267 (34%), Gaps = 31/267 (11%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L  ++    G L GL GVGGG +M P+L   F        +    A+GT L   A T   
Sbjct: 9   LYSLSGLFVGILVGLTGVGGGSLMTPILVLLF-------GVHPATAVGTDLLYAAATKAT 61

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI------SHVDKSFLNKAFAIFCLLMG 138
             + H   G+++ +I             VT  ++      S      +     +  LL  
Sbjct: 62  GTLVHGLKGSVDWRITGRLAAGSVPAAAVTLWVLHTHGMNSPSTARTIQLVLGVALLLTS 121

Query: 139 ILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
           + ++ R                    +   + G V G L     VG G     ++L    
Sbjct: 122 LALIFRPQLTALAARNPLAPSPARTLWSTVLTGAVLGVLVSMTSVGAGAIGVTVLLL--- 178

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            +Y A ATS  V + IA    L        + G+  W LG V+   +L +L  S+    +
Sbjct: 179 -LYPALATSRIVGSDIAHAVPLTL------VAGMGHWLLGSVDWSMLLSLLLGSLPGIVI 231

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + LS    ++ L    +  +      
Sbjct: 232 GSLLSARAPERLLRNLLAATLIAVGVR 258



 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 49/117 (41%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  +  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 151 VLTGAVLGVLVSMTSVGAGAIGVTVLLLLY------PALATSRIVGSDIAHAVPLTLVAG 204

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M H   G+++  +L   +       V+ SL+ +   +  L    A   + +G+ ++ 
Sbjct: 205 MGHWLLGSVDWSMLLSLLLGSLPGIVIGSLLSARAPERLLRNLLAATLIAVGVRLVL 261


>gi|332286300|ref|YP_004418211.1| transmembrane protein [Pusillimonas sp. T7-7]
 gi|330430253|gb|AEC21587.1| transmembrane protein [Pusillimonas sp. T7-7]
          Length = 254

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 87/235 (37%), Gaps = 23/235 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    ++  A+F+   + G  G G GL+M PV S       +  +  + + +G +L    
Sbjct: 13  LPIFAVLAGATFVGSVMRGFSGFGAGLLMAPVFSLL-----MSPTDVVVLVLGINLLTTF 67

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                +         +N +++        I   +   M+  VD + + K  A   +L+ +
Sbjct: 68  QMLPDALR------NVNWRLVLRLFIPSLIGLPIGLAMLHMVDAAIMRKTVAFIVILVAL 121

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
           LML        R         + G ++GF++   G+GG      ++      +    A S
Sbjct: 122 LMLAGWHYRGRR---GPAQDSMAGTLSGFMTAIAGIGGPPVILYMLSDRALPLAVMRAVS 178

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
               ++     L     SG        ++L         ++LP++IL + L  +L
Sbjct: 179 LVYFSMAQVATLAPLALSGSLTAQQGIYTL---------LLLPVAILASLLGAQL 224


>gi|167393930|ref|XP_001733526.1| hypothetical protein [Entamoeba dispar SAW760]
 gi|165894999|gb|EDR22813.1| hypothetical protein EDI_269710 [Entamoeba dispar SAW760]
          Length = 404

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 8/66 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +I + +F +G  +   G+GGG+V+ P+L +          +   VA  TS  +I  T+ 
Sbjct: 309 LIIPIGAFFAGVSAAYLGIGGGMVIGPILLEI--------GVLPQVATATSAFMIMFTAS 360

Query: 84  MSFMEH 89
            S +++
Sbjct: 361 SSSLQY 366



 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 135 LLMGILMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
           +++GI +  R R        +    +  +  I     G  +  LG+GGG+    ++L  G
Sbjct: 282 IIVGIFLWWRQRGEEVEGEVQWTVKNCLIIPIGAFFAGVSAAYLGIGGGMVIGPILLEIG 341

Query: 190 ASIYKATATSAGVSALIAFPALLVRIY 216
                ATATSA +    A  + L  I 
Sbjct: 342 VLPQVATATSAFMIMFTASSSSLQYII 368


>gi|187250635|ref|YP_001875117.1| putative permease [Elusimicrobium minutum Pei191]
 gi|186970795|gb|ACC97780.1| putative permease [Elusimicrobium minutum Pei191]
          Length = 250

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 90/248 (36%), Gaps = 27/248 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              + +   L+G +  L G GGGL+ +P    ++   G++ ++     +GT+    +  +
Sbjct: 4   FIFLSLMMTLAGFIDSLAG-GGGLITLP----SYLAFGLNPALL----LGTNKMSSSMGT 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +  + R++      ++     +  I + + + +   V+   L     I        ++
Sbjct: 55  LTAAYKFRKNIKTKKNLIIILAVLALIFSALGAALSRLVNPDNLKFIVIIIIPACAFFII 114

Query: 143 KRDRLYCER-----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKAT 196
            +  L         +        I   +     G LG G G    + +  + G  I ++T
Sbjct: 115 NKKYLQSSALKQIAENKSARAAKITSALVALYDGFLGPGAGTMYAVFLTKYCGFDIVRST 174

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  ++      AL   +            SLG VNI   LI+   +IL   +   +  
Sbjct: 175 AIAKILNFCSNIFALFFFL------------SLGAVNIKLGLIMGAFNILGASIGVYIGK 222

Query: 257 MIGKKYLT 264
             G+  + 
Sbjct: 223 RKGEAIIR 230


>gi|302879189|ref|YP_003847753.1| hypothetical protein Galf_1983 [Gallionella capsiferriformans ES-2]
 gi|302581978|gb|ADL55989.1| protein of unknown function DUF81 [Gallionella capsiferriformans
           ES-2]
          Length = 261

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 83/251 (33%), Gaps = 38/251 (15%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L   F        +    A+GT L   + T  +    H R GT+  K++      
Sbjct: 26  LMTPLLVMFF-------GVSPATAVGTDLLYASLTKTLGAWVHSRRGTVEWKVVGLLAMG 78

Query: 107 LPITTVVTSLMISHV--DKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN-------- 156
                +VT L++ ++  D+  L         +  +L         + K            
Sbjct: 79  SLPAALVTILLLKYLALDEKVLRSVVTSVLSIALLLTAVVLLFKEQIKKLGRSRDGRVYE 138

Query: 157 -------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY--GASIYKATATSAGVSALIA 207
                        G+V G L     +G G+   + +LF     S  K   T    +  + 
Sbjct: 139 LHHRYLPGATIATGVVVGALVTVSSIGAGVLGTVALLFLYPRMSPVKVVGTDIAHAVPLT 198

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
             A +  +            +LG V++  +  +L  S+    + + LS  + ++ L    
Sbjct: 199 AFAGMGHL------------ALGTVDLVLLGSLLIGSLPGIYIGSHLSARVPERILRPLL 246

Query: 268 SMIMFTTSFVF 278
           ++++       
Sbjct: 247 AVMLLIIGLKM 257



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I    + G L  +  +G G++    L   +  M           +GT +    P +  + 
Sbjct: 149 IATGVVVGALVTVSSIGAGVLGTVALLFLYPRMSPVKV------VGTDIAHAVPLTAFAG 202

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M H   GT+++ +L   +        + S + + V +  L    A+  L++G+ M+ 
Sbjct: 203 MGHLALGTVDLVLLGSLLIGSLPGIYIGSHLSARVPERILRPLLAVMLLIIGLKMVF 259


>gi|220929938|ref|YP_002506847.1| hypothetical protein Ccel_2539 [Clostridium cellulolyticum H10]
 gi|220000266|gb|ACL76867.1| conserved hypothetical protein [Clostridium cellulolyticum H10]
          Length = 124

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 37/79 (46%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
            H+A   +L    PT++++ + H ++  +N K+    +       V+ S +   ++ + L
Sbjct: 36  QHIAQSVNLLFFIPTAIVALVIHIKNKNVNFKMGIPIVITGLGGAVLGSKLALAMNGATL 95

Query: 127 NKAFAIFCLLMGILMLKRD 145
              F +F LLMGI  +   
Sbjct: 96  KHIFGVFLLLMGIYEIFGK 114


>gi|307720596|ref|YP_003891736.1| hypothetical protein Saut_0675 [Sulfurimonas autotrophica DSM
           16294]
 gi|306978689|gb|ADN08724.1| protein of unknown function DUF81 [Sulfurimonas autotrophica DSM
           16294]
          Length = 212

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 67/187 (35%), Gaps = 11/187 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           DY+  +++   LSG  S + G   GL ++P+ +           +   VA    L   A 
Sbjct: 3   DYVLYLLITLILSGIFS-MGGAEAGLALIPIFNFL--------GLGFTVAKAVGLFTGAS 53

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T++ S + + +   ++ K +     ++ I   + +   S +D++ +   + +       +
Sbjct: 54  TTITSSVMNIKRKAVDFKFVFPIALMMVICAPLGAYSSSFIDENLVKFIYMLLLFYSAAM 113

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           M+  ++          +  +      G +       G  FT    +     +    A SA
Sbjct: 114 MMFSEKKRLFHA-ESKFTLFTVRAAVGCI-VPFSALGSFFTYATYVPLDWVLLSVVAFSA 171

Query: 201 GVSALIA 207
            V   I 
Sbjct: 172 IVGGYIG 178


>gi|17229590|ref|NP_486138.1| hypothetical protein all2098 [Nostoc sp. PCC 7120]
 gi|17131189|dbj|BAB73797.1| all2098 [Nostoc sp. PCC 7120]
          Length = 125

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 61/125 (48%), Gaps = 8/125 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I + ++   ++G +SG+ G+GGG++++P L                 A GT+L ++ 
Sbjct: 1   MNSILICLILGLIAGIVSGMTGIGGGIIILPALIFLLGF-------SQQQAQGTTLALLV 53

Query: 80  P-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           P   +++   + + G +++K+         +   + + + +++    L+K FA+  ++  
Sbjct: 54  PPIDLLAAWVYYKQGYVDIKVAAIICLGFILGGWLGAKVGTNLPTGTLSKIFAVLMIIGA 113

Query: 139 ILMLK 143
           + +L 
Sbjct: 114 LKVLF 118


>gi|295092112|emb|CBK78219.1| Predicted permeases [Clostridium cf. saccharolyticum K10]
          Length = 252

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 81/209 (38%), Gaps = 16/209 (7%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  +    ++    FL+G +  + G GGGL+ +P    A         I  H+++G++  
Sbjct: 2   EISLTQYLIVCPLVFLAGLMDSIAG-GGGLISLPAFMIA--------GIPAHLSLGSNKM 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                +V+S     ++G IN K    +     I + + S ++  V +  + K   +   +
Sbjct: 53  CSVMGTVVSTARFAKNGFINFKTSIWFAAAALIGSSIGSHLVLLVSEGVIEKLMLVILPI 112

Query: 137 MGILMLKRDRLYCERKFPD------NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYG 189
           + + +L    L  + K           +     ++ G   G  G G G F  L++     
Sbjct: 113 VAVYVLWNKNLGDDSKAGTLSKGKMFAISMAAALIVGAYDGFYGPGTGTFLILILTGAAR 172

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
            ++ +A  T+  ++      A    + +G
Sbjct: 173 YTMKEAAGTTKVINLASNAAAFATFLLNG 201


>gi|303257819|ref|ZP_07343829.1| putative membrane protein [Burkholderiales bacterium 1_1_47]
 gi|302859422|gb|EFL82503.1| putative membrane protein [Burkholderiales bacterium 1_1_47]
          Length = 253

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 91/267 (34%), Gaps = 22/267 (8%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  +  I +  V  F++G +  + G GGGL+ +PVL            I  H  +GT   
Sbjct: 2   DITLTVILVCFVVFFIAGFVDAIAG-GGGLITMPVLLLL--------GIPAHYTLGTGKL 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
             +  S+ + +   + G +  +++   +       V+ S     +    +         +
Sbjct: 53  ASSLGSITALITFWKRGAVIKEVVLLGVISSYFGAVIASATTLLISNEKMTIIMIFLLPV 112

Query: 137 MGILMLKRDRLYCERKFPDNYVKY----IWGMVTGFLSGALGVGGGIFTNL-LMLFYGAS 191
             +L L    L    +       +      G+  GF  G  G G G F  + + L   A 
Sbjct: 113 AILLSLFCGTLKLTEEDLPKKGVWWRVSAIGLSVGFYEGFFGPGAGSFFLIGIHLLLKAG 172

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           + KA+ T+   +      A+     +G     L         +   +  +  + L    A
Sbjct: 173 LVKASGTAKAFNIAANLGAVTTFASAGTLYYSLA--------LPCAVASILGNRLGAIYA 224

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            K+   + +  L     M++ +    F
Sbjct: 225 VKIGPTLVRSMLYFVLVMLLISLITRF 251


>gi|21322903|dbj|BAB97532.1| Predicted permeases [Corynebacterium glutamicum ATCC 13032]
          Length = 266

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 93/235 (39%), Gaps = 25/235 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++I  + ++G +  + G GGGLV++P++            +    A+ ++       +  
Sbjct: 18  ILIAGAAVAGWIDAVIG-GGGLVLIPLILAVM------PQLAPVTALASNKLAAVTGTAS 70

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +     R    + K+L  ++ V  + +   +L  S +DK  +     +  L++G++++ +
Sbjct: 71  AAFTLVRRVKPDKKLLALYVLVAAVCSGAGALAASLIDKQIMRPLIIVLMLVVGLIVVFK 130

Query: 145 DRLYC--ERKFPDNYVKYIWGMVTGFLS---GALGVGGGIFTNL-LMLFYGASIYKATAT 198
                   +  P  + ++   +  G ++   G  G G G+F  +        +   + A 
Sbjct: 131 PNFGTGESKALPTGWKRWAAIVAVGLIAAYDGIFGPGTGMFLIMAFTALLSQNFLSSAAM 190

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +  V+      AL+V I  G        W+LG       L++   ++    L  +
Sbjct: 191 AKVVNTATNLGALIVFIIGGHM-----WWTLG-------LVLAVANVAGAQLGAR 233


>gi|116514622|ref|YP_813528.1| permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|116093937|gb|ABJ59090.1| Predicted permease [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
          Length = 246

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 77/258 (29%), Gaps = 24/258 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              +I+   L+G ++ +  +   LV  P L   F L  +  ++       T+   +  T 
Sbjct: 3   FIYLIILGVLAGIVAAVASM-ASLVSYPGLL-LFGLSPVSANM-------TNTAALVTTG 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   + +    N   L  + F      ++   ++         K    F L    L+L
Sbjct: 54  FGSLSSYLKEMRGNWGELWRYAFFQLTGALIGGWLLVKFPGKIFQKLVPFFVLFSAGLLL 113

Query: 143 KRDRLYCERKF--PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT-ATS 199
              R    ++         Y    V G  +G  G   G+ T + +     S +    A  
Sbjct: 114 YSGRQKQPKQATKLGRIGAYFGLFVAGIYAGYFGAASGVLTLIFLTALSDSSFVVINAIK 173

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           + + +L    AL +  + G             VN      +     +      K+   + 
Sbjct: 174 SVIGSLANLVALALFAFKGV------------VNWPVAFTLAIGLFIGGYFGQKMIKYLK 221

Query: 260 KKYLTIGFSMIMFTTSFV 277
             ++    +      +  
Sbjct: 222 PAWVRWITACFSVLLAIY 239



 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
              F++G  +G FG   G     VL+  F     D S  +  A+ + +G +A    ++  
Sbjct: 134 FGLFVAGIYAGYFGAASG-----VLTLIFLTALSDSSFVVINAIKSVIGSLANLVALALF 188

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                G +N  +       L I       MI ++  +++    A F +L+ I +
Sbjct: 189 AF--KGVVNWPVAFTLAIGLFIGGYFGQKMIKYLKPAWVRWITACFSVLLAIYL 240


>gi|291037432|ref|ZP_06568396.1| hypothetical protein GxylN3_01180 [Gluconacetobacter xylinus NBRC
           3288]
          Length = 322

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 49/143 (34%), Gaps = 1/143 (0%)

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I   +  +         I   I++ +         + +  +S ++ ++L+    +F + 
Sbjct: 66  SIGTVASSATRIISFWQAIRWDIVRHFAPTALPFAALGAWALSRMEPAYLSLLLGVFLMG 125

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
              L+ ++       K P     ++ G   GF+SG  G  G +F        G    +  
Sbjct: 126 NLPLLFRKPAPQVTVKTPHAIELHVLGATAGFISGFTGAVGLVFNGFYYRL-GLRKEEIV 184

Query: 197 ATSAGVSALIAFPALLVRIYSGW 219
           AT A    ++    + +    G 
Sbjct: 185 ATRAANEIMLHVLKIALYAEFGL 207


>gi|254368847|ref|ZP_04984860.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157121768|gb|EDO65938.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 259

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 86/214 (40%), Gaps = 15/214 (7%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMH 68
           +M     +        I+   FL+  +  + G GGGL+ +P LS     ++ +  +    
Sbjct: 1   MMQHFFAEHFYILCVFIVSMGFLASFIDAIAG-GGGLISIPALSLTGLPIVTVLGTNKFQ 59

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
            ++GT + V         +++ + G I++K +   +    I     +L+   +   F+N 
Sbjct: 60  ASIGTGMAV---------LKYYKSGLIDIKTVIRGLVAGFIGACCGTLLTLLIHNDFMNN 110

Query: 129 AFAIFCLLMGILMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
              I  + + I  +    L     +++  +     ++G + G   G  G G G    + +
Sbjct: 111 IVPILLIAVFIFSIVNKNLGVAQGKKRMSEVAFFTLFGFILGAYDGFFGPGTGNLWIIAI 170

Query: 186 LFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
           +++ G +  +A+  +  ++      +L V   SG
Sbjct: 171 VYFLGYTFLQASGYAKMLNLKSNVFSLTVFALSG 204


>gi|194323203|ref|ZP_03056987.1| domain protein of unknown function, putative [Francisella
           tularensis subsp. novicida FTE]
 gi|254373331|ref|ZP_04988819.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151571057|gb|EDN36711.1| conserved hypothetical protein [Francisella novicida GA99-3549]
 gi|194322567|gb|EDX20047.1| domain protein of unknown function, putative [Francisella
           tularensis subsp. novicida FTE]
          Length = 259

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 87/214 (40%), Gaps = 15/214 (7%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMH 68
           +M     +        I+   FL+  +  + G GGGL+ +P LS     ++ +  +    
Sbjct: 1   MMQHFFAEHFYILCVFIVSMGFLASFIDAIAG-GGGLISIPALSLTGLPIVTVLGTNKFQ 59

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
            ++GT + V         +++ + G I++K +   +    I     +L+   +   F+N 
Sbjct: 60  ASIGTGMAV---------LKYYKSGLIDIKTVVRGLVAGFIGACCGTLLTLLIHNDFMNN 110

Query: 129 AFAIFCLLMGILMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
              I  + + I  +    L     +++  +     ++G + G   G  G G G F  + +
Sbjct: 111 IVPILLIAVFIFSIVNKNLGVAQGKKRMSEVAFFTLFGFILGAYDGFFGPGTGNFWIIAI 170

Query: 186 LFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
           +++ G +  +A+  +  ++      +L V   SG
Sbjct: 171 VYFLGYTFLQASGYAKMLNLKSNVFSLTVFALSG 204


>gi|71279475|ref|YP_267032.1| hypothetical protein CPS_0265 [Colwellia psychrerythraea 34H]
 gi|71145215|gb|AAZ25688.1| putative membrane protein [Colwellia psychrerythraea 34H]
          Length = 252

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 4/160 (2%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             I   VA+GT+       +  + +   R+  +  + +K+ +    I + + ++++  V+
Sbjct: 42  SGIPPLVALGTNKLQSCVGAGTASVMMLRNRRVRWRQVKELMPAAFIGSAIGTVIVQFVN 101

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRLYCER---KFPDNYVKYIWGMVTGFLSGALGVGGGI 179
              L     +   ++GI  L    +  +    K   +  +     + G   G LG G G 
Sbjct: 102 TEALTFIIPVVISVIGIYFLVTPTVDADNKPAKVSTSGYRNFVVPLIGCYDGILGPGTGS 161

Query: 180 FTNLL-MLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           F  L      G    +ATA +  ++      +L+V +++G
Sbjct: 162 FFTLAGRALRGQKFLEATAIAKTLNFSTNIASLIVFLFAG 201


>gi|15922568|ref|NP_378237.1| hypothetical protein ST2237 [Sulfolobus tokodaii str. 7]
 gi|15623358|dbj|BAB67346.1| 281aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 281

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 99/261 (37%), Gaps = 29/261 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLM---GIDDSICMHVAMGTSLGVIAP 80
            L I+A FL G   GL G GG ++ +P+L     L    G++ +   H+ +GT+   +  
Sbjct: 10  VLSIIAGFLVGFSLGLIGGGGSILAIPLLLYFVGLAYLPGVNKNYIDHLVIGTTALAVGL 69

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            + ++   H + G + +     +     + T V + +   V    L   F I  +++ ++
Sbjct: 70  NAYINAFIHWKKGNVRILEGIFFTLPGILGTYVGARVGLIVHGGLLLFLFGILMIVIAVM 129

Query: 141 MLK-RDRLYCERKFPDNYVKYI------------WGMVTGFLSGALGVGGGIFTNLLMLF 187
           + + +DR    + +P+                   G + GF SG  G+GGG      +LF
Sbjct: 130 VFRGKDRPAVSKTYPNGEPTKGLLQRVKLQRIIPIGFLVGFASGFFGIGGGFLIVPGLLF 189

Query: 188 Y-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
             G  + KA  TS            L    +G             ++I  +L  +     
Sbjct: 190 STGICMIKAVGTSLISVGTFGVTGALTYALAGEIDPI--------ISILYLLGGIAGGY- 240

Query: 247 ITPLATKLSYMIGKKYLTIGF 267
              +  K++  + +  L   F
Sbjct: 241 ---VGAKIASSMPRGMLRKVF 258


>gi|208779612|ref|ZP_03246957.1| hypothetical membrane protein [Francisella novicida FTG]
 gi|254374794|ref|ZP_04990275.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|151572513|gb|EDN38167.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|208744573|gb|EDZ90872.1| hypothetical membrane protein [Francisella novicida FTG]
          Length = 259

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 87/214 (40%), Gaps = 15/214 (7%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMH 68
           +M     +        I+   FL+  +  + G GGGL+ +P LS     ++ +  +    
Sbjct: 1   MMQHFFAEHFYILCIFIVSMGFLASFIDAIAG-GGGLISIPALSLTGLPIVTVLGTNKFQ 59

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
            ++GT + V         +++ + G I++K +   +    I     +L+   +   F+N 
Sbjct: 60  ASIGTGMAV---------LKYYKSGLIDIKTVVRGLVAGFIGACCGTLLTLLIHNDFMNN 110

Query: 129 AFAIFCLLMGILMLKRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
              I  + + I  +    L     +++  +     ++G + G   G  G G G F  + +
Sbjct: 111 IVPILLIAVFIFSIVNKNLGVAQGKKRMSEVAFFTLFGFILGAYDGFFGPGTGNFWIIAI 170

Query: 186 LFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
           +++ G +  +A+  +  ++      +L V   SG
Sbjct: 171 VYFLGYTFLQASGYAKMLNLKSNVFSLTVFALSG 204


>gi|313143601|ref|ZP_07805794.1| permease with 5 transmembrane domains [Helicobacter cinaedi CCUG
           18818]
 gi|313128632|gb|EFR46249.1| permease with 5 transmembrane domains [Helicobacter cinaedi CCUG
           18818]
          Length = 256

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 70/189 (37%), Gaps = 15/189 (7%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+       S      + + G +++   +  I +  I + + +  +  V    L+K 
Sbjct: 52  ALATNKLQACVGSFTGAAHYYKGGLVDLGQSRICIAIAVIFSGLGAFAVQFVSLEILSKI 111

Query: 130 FAIFCLLMGILMLKRDRLYCER--KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LML 186
                +L+G+  L   +L  +   K P  ++ Y+   V     G LGVG G F  +  + 
Sbjct: 112 LPFVMILVGMYFLFSPKLSDKDRAKSPCPFLLYMSCAVASVYGGLLGVGIGSFVLMIFVS 171

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
             G  + KA A S  +       + L+ I              G V     +++    ++
Sbjct: 172 IAGYGLSKALAHSRVLVFSGNLSSTLLFIIG------------GNVLWILGILMCVGQMI 219

Query: 247 ITPLATKLS 255
              L  KL+
Sbjct: 220 GATLGAKLA 228


>gi|51245984|ref|YP_065868.1| hypothetical protein DP2132 [Desulfotalea psychrophila LSv54]
 gi|50877021|emb|CAG36861.1| conserved hypothetical membrane protein [Desulfotalea psychrophila
           LSv54]
          Length = 246

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 94/261 (36%), Gaps = 27/261 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +  I + +F    +  L GVG  + +VP L       G+   +   +A    L V   +
Sbjct: 1   MLLTIALLAFCLSFIFALGGVGSAVALVPALIAI----GVPGGVARPIA----LLVNTVS 52

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                + + + G          I        + + + + +  + L+  FA F +  G LM
Sbjct: 53  LGGGTIYNLKTGKFKPGPWWLLILFSLPAAPLGAWVSTLIPHNILSGVFAGFMVFSGFLM 112

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI-----YKAT 196
           +   R   ++K   N    + G + G +SG +    G+    +++    ++     + A 
Sbjct: 113 IAPAR-KSQQKEERNTCPPVGGALIGAVSGVVSGMLGVGGGGVIIPALYAMRFRSHHIAM 171

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T+  V    +F   +     G             +NI  V++    ++    + T+  +
Sbjct: 172 ITAMAV-PFSSFTGFIAYAAMGS------------LNITTVVVASLAALAGGTIGTRAMH 218

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            I ++ + +  S+ +  +   
Sbjct: 219 RIDQRLVKMFLSITLIISGGR 239


>gi|300088148|ref|YP_003758670.1| hypothetical protein Dehly_1048 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527881|gb|ADJ26349.1| protein of unknown function DUF81 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 261

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/213 (12%), Positives = 62/213 (29%), Gaps = 16/213 (7%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
              SL +I   +V +   + R    + +             +     +  V ++     F
Sbjct: 55  TAVSLSIILINAVAAAAAYHRQARTDYRAGFLLAGATIPGVLAGVWTLQFVSRADFTLIF 114

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDN------YVKYIWGMVTGFLSGALGVGGGIFTNLL 184
           ++  + +  L++ +                      + G            GG I    +
Sbjct: 115 SLLMIALSFLLIFKRNPAPAPAISGRQPFNIPLGLGLSGSAGYLAGLLGIGGGIIHVPAM 174

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
                   + ATATS+ +    AF  +++ +     +        G +   AV  I    
Sbjct: 175 TYILRFPAHIATATSSFILIFTAFAGVVMHM-----VQNNFGADWGVIPWLAVGGIA--- 226

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                + ++LS  +  + L    ++ +      
Sbjct: 227 --GAQIGSRLSRRLQGQTLIRILAISLAAAGIR 257



 Score = 40.1 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 31/98 (31%), Gaps = 9/98 (9%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI--NMKILKDWIFV 106
           VP ++   +          H+A  TS  ++  T+    + H        +  ++      
Sbjct: 171 VPAMTYILRF-------PAHIATATSSFILIFTAFAGVVMHMVQNNFGADWGVIPWLAVG 223

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                 + S +   +    L +  AI     GI ++  
Sbjct: 224 GIAGAQIGSRLSRRLQGQTLIRILAISLAAAGIRLIFG 261


>gi|38232758|ref|NP_938525.1| hypothetical protein DIP0130 [Corynebacterium diphtheriae NCTC
           13129]
 gi|38199016|emb|CAE48634.1| Putative membrane protein [Corynebacterium diphtheriae]
          Length = 256

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 73/199 (36%), Gaps = 11/199 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++   +  +G +  + G GGGL+++P++      M +   +    A+ T+       + 
Sbjct: 9   AILTFGAAAAGWVDAVIG-GGGLILIPLI------MAVAPGLLPANALATNKFAAVTGTF 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + +   R   ++  +    I V  + + + +LM + + K  +     I  L+ G+ +  
Sbjct: 62  SAAVTLVRKVGVDTSLALRMIPVAAVGSGLGALMAASISKDVMRPIVIILMLIAGLFVAL 121

Query: 144 RDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATS 199
           R          K     V  I         G  G G G+F  +           ++ A +
Sbjct: 122 RPDFGQGNSTHKPWGRAVALIAVAAIALYDGIFGPGTGMFLIMAFTALLSQDFIRSAALA 181

Query: 200 AGVSALIAFPALLVRIYSG 218
             ++      AL V I +G
Sbjct: 182 KVINTATNIGALCVFIAAG 200


>gi|213970665|ref|ZP_03398790.1| membrane protein [Pseudomonas syringae pv. tomato T1]
 gi|301382552|ref|ZP_07230970.1| hypothetical protein PsyrptM_07962 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302063081|ref|ZP_07254622.1| hypothetical protein PsyrptK_24104 [Pseudomonas syringae pv. tomato
           K40]
 gi|302133572|ref|ZP_07259562.1| hypothetical protein PsyrptN_19369 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213924499|gb|EEB58069.1| membrane protein [Pseudomonas syringae pv. tomato T1]
          Length = 272

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 15/119 (12%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
           + +    G++ G +    G GGGI    L++F             G+   I   A +  +
Sbjct: 5   SLLGAGLGVIIGAVLALTGAGGGILAVPLLVF-------------GLGLTIVEAAPVGLL 51

Query: 216 YSGWGLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             G          L  G V   A   I  I +L+ P+   L++ +    L + FS ++ 
Sbjct: 52  AVGLAAGVGAVLGLRQGIVRYRAAGYIAGIGVLMAPIGLWLAHRLPNTPLALIFSAVLL 110



 Score = 42.0 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 86/239 (35%), Gaps = 32/239 (13%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++D+  L      + G +  L G GGG++ VP+L     L  ++ +    +A+G + GV 
Sbjct: 1   MIDHSLLGAGLGVIIGAVLALTGAGGGILAVPLLVFGLGLTIVEAAPVGLLAVGLAAGVG 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           A   +       R G +  +       +  +   +   +   +  + L   F+   L   
Sbjct: 61  AVLGL-------RQGIVRYRAAGYIAGIGVLMAPIGLWLAHRLPNTPLALIFSAVLLYAC 113

Query: 139 ILMLKRD-----------------------RLYCERKFPDNYVKYIWGMVTGFLSGALGV 175
             +  R                        +       P        GM +G LSG LGV
Sbjct: 114 GRIFIRASRELRDGRQAPRAQMLPCVLNPLQGRLRWTMPCLRALTFTGMCSGLLSGLLGV 173

Query: 176 GGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSG-WGLNGLPPWSLGFV 232
           GGG      +  Y    +    ATS  V AL++  ++++   SG        P++LG V
Sbjct: 174 GGGFVIIPALTRYSDLDMKSVVATSLAVIALVSTGSVIIASLSGVMHWAVGAPFALGAV 232



 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 38/98 (38%), Gaps = 7/98 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V++P L++          + M   + TSL VIA  S  S +     G ++  +   +  
Sbjct: 177 FVIIPALTRY-------SDLDMKSVVATSLAVIALVSTGSVIIASLSGVMHWAVGAPFAL 229

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                 +    +  ++    L + FA+  +   ++++ 
Sbjct: 230 GAVAGLLGGRQVARYLAGPRLQQLFAVCGIAAALMLVF 267


>gi|254420414|ref|ZP_05034138.1| conserved domain protein, putative [Brevundimonas sp. BAL3]
 gi|196186591|gb|EDX81567.1| conserved domain protein, putative [Brevundimonas sp. BAL3]
          Length = 307

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 8/130 (6%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG-VIAPTSVMSFME 88
              +G LS + GVGGG ++VP +    +       +     +GTSL  +I  T++ + ++
Sbjct: 182 GVFAGILSAIMGVGGGFILVPAMLYVLR-------MRAGAVVGTSLFQIIITTAITTILQ 234

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
             R+ T+++ +    +    +   + +          L  A  +  LL+GI M     + 
Sbjct: 235 AGRNQTVDILLSTILLLGGVVGAQIGARFAGRFRAEELRAALGLIVLLVGIQMGLELFVR 294

Query: 149 CERKFPDNYV 158
               F     
Sbjct: 295 PSDIFLLAPG 304


>gi|283796179|ref|ZP_06345332.1| putative membrane protein [Clostridium sp. M62/1]
 gi|291076397|gb|EFE13761.1| putative membrane protein [Clostridium sp. M62/1]
          Length = 252

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 81/209 (38%), Gaps = 16/209 (7%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  +    ++    FL+G +  + G GGGL+ +P    A         I  H+++G++  
Sbjct: 2   EISLTQYLIVCPLVFLAGLMDSIAG-GGGLISLPAFMIA--------GIPAHLSLGSNKM 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                +V+S     ++G IN K    +     I + + S ++  V +  + K   +   +
Sbjct: 53  CSVMGTVVSTARFAKNGFINFKTSIWFAAAALIGSSIGSHLVLLVSEGVIEKLMLVILPI 112

Query: 137 MGILMLKRDRLYCERKFPD------NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYG 189
           + + +L    L  + K           +     ++ G   G  G G G F  L++     
Sbjct: 113 VAVYVLWNKNLGDDSKAGTLSKGKMFAISMAAALIVGAYDGFYGPGTGTFLILILTGAAR 172

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSG 218
            ++ +A  T+  ++      A    + +G
Sbjct: 173 YTMKEAAGTTKVINLASNAAAFATFLLNG 201


>gi|77361007|ref|YP_340582.1| hypothetical protein PSHAa2083 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76875918|emb|CAI87139.1| putative orphan protein ; putative membrane protein
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 252

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 90/270 (33%), Gaps = 28/270 (10%)

Query: 11  MVFLSKDCVVDYICLIIVA-SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           M  L+ + V   I L+++  +  +  +S  FG GGGL+++ V++    +  +     +  
Sbjct: 1   MDLLATEFVTPCIALLLIVLAGFTSFVSAAFGAGGGLMLLVVMASIMPMTVVVPVHGL-- 58

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
                          +         I+  +   +     +   ++S +++ +    +  A
Sbjct: 59  ---------VQLGSNANRLVLSIKHIDKSMFIYFTLGGLVGAGISSTVVNDIQLDGMKLA 109

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            A+F + +            + K      + + G++T F+S  +G   G      +    
Sbjct: 110 VAVFVVYLLW------GKTPKFKNDSKLGRLVAGLITAFISMFVGA-SGPLVASYLHINN 162

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
               K TAT + +  L       V    G+              +  V+ ++    L T 
Sbjct: 163 YDKLKFTATFSSIMTLQHVLKAFVYTVIGFNFWQ---------WLPLVIGMIASGALGTW 213

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           L   L   +        F +I+   +   A
Sbjct: 214 LGIYLLKRMPTARFKTIFKVILTLMACQLA 243


>gi|332678697|gb|AEE87826.1| Membrane protein, putative [Francisella cf. novicida Fx1]
          Length = 258

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 84/200 (42%), Gaps = 15/200 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMHVAMGTSLGVIAPTS 82
             I+   FL+  +  + G GGGL+ +P LS     ++ +  +     ++GT + V     
Sbjct: 14  IFIVSMGFLASFIDAIAG-GGGLISIPALSLTGLPIVTVLGTNKFQASIGTGMAV----- 67

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               +++ + G I++K +   +    I     +L+   +   F+N    I  + + I  +
Sbjct: 68  ----LKYYKSGLIDIKTVVRGLVAGFIGACCGTLLTLLIHNDFMNNIVPILLIAVFIFSI 123

Query: 143 KRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATAT 198
               L     +++  +     ++G + G   G  G G G F  + ++++ G +  +A+  
Sbjct: 124 VNKNLGVAQGKKRMSEVAFFTLFGFILGAYDGFFGPGTGNFWIIAIVYFLGYTFLQASGY 183

Query: 199 SAGVSALIAFPALLVRIYSG 218
           +  ++      +L V   SG
Sbjct: 184 AKMLNLKSNVFSLTVFALSG 203


>gi|217973379|ref|YP_002358130.1| hypothetical protein Sbal223_2208 [Shewanella baltica OS223]
 gi|217498514|gb|ACK46707.1| protein of unknown function DUF81 [Shewanella baltica OS223]
          Length = 252

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 81/261 (31%), Gaps = 35/261 (13%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D   L+ +++  +   +  FG+GGG++++ ++++      I             L  +  
Sbjct: 14  DIFALLTLSAAFTSFFTACFGIGGGVMLLGLMAQVLPPQLIIP-----------LHGVVQ 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                         I  +++  +     +  ++ S+++  +  S +    A F L     
Sbjct: 63  LGSNGGRAALGWRYIEWRLIAAFFPGAILGALLGSVVLVALPPSVMYLTIAAFILYSCW- 121

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG----GIFTNLLMLFYGASIYKAT 196
                     +K          G +T F+S   G  G         L +  +      A 
Sbjct: 122 -----GPKLPKKVFGTLGTLAAGAITTFISLFAGATGPLVAAFIKQLEVDRFRTVATFAM 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A S      I     +    + W                 ++ ++    + T +  K+  
Sbjct: 177 AMSLQHGVKIVVYEGMGGSLANW--------------WPLLVCMMLSGTVGTWIGFKMLK 222

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            +  K+    FS+++   +  
Sbjct: 223 RVADKHFQTAFSIVLTLLAIR 243


>gi|285019886|ref|YP_003377597.1| hypothetical protein XALc_3124 [Xanthomonas albilineans GPE PC73]
 gi|283475104|emb|CBA17603.1| hypothetical transmembrane protein [Xanthomonas albilineans]
          Length = 274

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 13/208 (6%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           + +   +  ++  +F +G +    G GGGL+ +P L                + +GT+  
Sbjct: 20  ESIPTELPWLLCIAFSAGLVDAAVG-GGGLIQLPGLFATLPQQ------APALLLGTNKF 72

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                +  +   + RH  +  + +          + + +  +S + K  +     +  + 
Sbjct: 73  SSMAGTGAATWRYTRHVRLPWRPVLYATAAAFAFSFLGATAVSLLPKQAVRPLILVLLIA 132

Query: 137 MGILMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGA 190
           M    L +       +       +  +    G   GF  G  G G G     L + F+G 
Sbjct: 133 MLGYTLLKKDFGALHRPRHIGRRELVIALTMGAAIGFYDGFFGPGTGSFLIFLFIRFFGL 192

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSG 218
              +A+A +  V+      AL   + SG
Sbjct: 193 DFLRASAAAKVVNLATNLAALCFFLPSG 220


>gi|182438450|ref|YP_001826169.1| hypothetical protein SGR_4657 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326779099|ref|ZP_08238364.1| protein of unknown function DUF81 [Streptomyces cf. griseus
           XylebKG-1]
 gi|178466966|dbj|BAG21486.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326659432|gb|EGE44278.1| protein of unknown function DUF81 [Streptomyces cf. griseus
           XylebKG-1]
          Length = 264

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 73/216 (33%), Gaps = 25/216 (11%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +++PVL  AF       +    VA+GT+       +  +   ++R   ++  +L     +
Sbjct: 38  LLIPVLLLAF------PTYSPAVALGTNKIAAVMGTATAAYMYQRRTELDRSVLLPAAGL 91

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER------KFPDNYVKY 160
                 + +L  S V  S+         + + + +  R     ++          N    
Sbjct: 92  AIPFGALGALSASSVPASYFRPVIMGLLITVALFVAFRPDFGVQQRNITVTPRRRNTAIL 151

Query: 161 IWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           + G+  GF  G  G G G                ++ A +  ++A     AL V  + G 
Sbjct: 152 VAGVGIGFYDGVFGPGVGTFLIISFTTLLATQFLESAAMAKVINASSNLGALAVFAWQG- 210

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
                  W+LG       L +   +I    + ++ +
Sbjct: 211 ----NVLWALG-------LGMAVGNIAGAMIGSRTA 235


>gi|167535095|ref|XP_001749222.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772375|gb|EDQ86028.1| predicted protein [Monosiga brevicollis MX1]
          Length = 267

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 29/93 (31%), Gaps = 8/93 (8%)

Query: 44  GGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDW 103
           GG++++P L +          + +  A+ + L       +     ++    +N       
Sbjct: 102 GGIILLPALIQL-------PEVQLQEAIASCLFAYIFAGITGGFVYQWQVGVNWHTASWL 154

Query: 104 IFVLPITTVVTSLMISHVDKSFLN-KAFAIFCL 135
           I          +  +++V    +    F    L
Sbjct: 155 ILGALPGAFAGAFTLTYVPDLAIKAVLFGCILL 187


>gi|167031091|ref|YP_001666322.1| hypothetical protein PputGB1_0070 [Pseudomonas putida GB-1]
 gi|166857579|gb|ABY95986.1| protein of unknown function DUF81 [Pseudomonas putida GB-1]
          Length = 272

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 11/118 (9%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G + G +    G GGGI    L++F             G+S + A P  L+ +    
Sbjct: 9   AGLGAIIGAVLALTGAGGGILAVPLLVF-----------GLGLSMVEAAPVGLLAVGLAA 57

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            +  +     G V   A L I  + +   P    L++ +    L + F+ ++      
Sbjct: 58  AVGAVLGLRQGLVRYRAALFIALVGVAAAPFGLMLAHRLPNTPLQLVFAGVLVYACLR 115



 Score = 39.3 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 44/126 (34%), Gaps = 7/126 (5%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++++  L      + G +  L G GGG++ VP+L            + M  A    L  +
Sbjct: 1   MIEHQLLGAGLGAIIGAVLALTGAGGGILAVPLLVFGL-------GLSMVEAAPVGLLAV 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              + +  +   R G +  +       V         ++   +  + L   FA   +   
Sbjct: 54  GLAAAVGAVLGLRQGLVRYRAALFIALVGVAAAPFGLMLAHRLPNTPLQLVFAGVLVYAC 113

Query: 139 ILMLKR 144
           + + ++
Sbjct: 114 LRIWRK 119



 Score = 38.5 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 35/93 (37%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +    ++ M   + TSL VIA  S  S +     G ++ ++   +     +  +
Sbjct: 177 FVIIPALNRYTNLRMASIVSTSLAVIALVSTGSVVSASLAGVMHWQVGAPFAVGAVLGLL 236

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           +   + + +    L + FA+      +L+  + 
Sbjct: 237 LARPLAARLAGPRLQQMFAVAGWTAALLLAGKS 269


>gi|320106393|ref|YP_004181983.1| hypothetical protein AciPR4_1161 [Terriglobus saanensis SP1PR4]
 gi|319924914|gb|ADV81989.1| protein of unknown function DUF81 [Terriglobus saanensis SP1PR4]
          Length = 120

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 9/123 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI-APTS 82
            LII+     G   GL G GG  ++ P L   F L  +        A GT+L +   P  
Sbjct: 6   WLIILIGVGVGACVGLAGTGGAFII-PTLIFGFGLTQLR-------AQGTALLIASLPIW 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++  + + R   ++ ++       L + +   +     +    + K FA+  + + I + 
Sbjct: 58  IVPLIPYARAKQVDWRLGLVLAIGLTVGSWFGAQWAQQLPVGLVRKTFAVVLISVAIKLF 117

Query: 143 KRD 145
            + 
Sbjct: 118 LQR 120



 Score = 37.4 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 44/122 (36%), Gaps = 11/122 (9%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            ++  + G+  G   G  G GG      L+  +G +  +A  T+           LL+  
Sbjct: 5   AWLIILIGVGVGACVGLAGTGGAFIIPTLIFGFGLTQLRAQGTA-----------LLIAS 53

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
              W +  +P      V+    L++     + +    + +  +    +   F++++ + +
Sbjct: 54  LPIWIVPLIPYARAKQVDWRLGLVLAIGLTVGSWFGAQWAQQLPVGLVRKTFAVVLISVA 113

Query: 276 FV 277
             
Sbjct: 114 IK 115


>gi|294085546|ref|YP_003552306.1| integral membrane protein [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665121|gb|ADE40222.1| integral membrane protein, putative [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 247

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 86/264 (32%), Gaps = 28/264 (10%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +  +   + + +   G ++GL G G        L      + I   +    A+  +L V
Sbjct: 1   MISSFYLFLALGAACGGFVNGLAGFGT------ALFALGFWLHIMPPVQ---AVAITLAV 51

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
              T        R+    N + L  ++        +    +S++D S L     +  ++ 
Sbjct: 52  SITTGAQGVWVVRKAIRANPRRLLWFLLPGICGVPIGVASLSYLDASILKLVIGVISIVY 111

Query: 138 GILMLKRDR-LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA-SIYKA 195
           G+  L +       R  P      +   + GF+SG  G    +   L+M++       KA
Sbjct: 112 GLFFLAQRSLPRVTRSMP------VADALVGFISGIFGGAASLSGALMMMWNAVRDWQKA 165

Query: 196 T--ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
              A     + ++      +   +G        +         + + +P++++   L   
Sbjct: 166 EIRAVLQPFNFVVLSCGTAMLAVNGAYDIQTLSY---------LALAIPVALISAQLGIA 216

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFV 277
           L   +          ++M  +  V
Sbjct: 217 LFRRMQSDAFRRLLIVMMLISGCV 240


>gi|152965754|ref|YP_001361538.1| hypothetical protein Krad_1788 [Kineococcus radiotolerans SRS30216]
 gi|151360271|gb|ABS03274.1| protein of unknown function DUF81 [Kineococcus radiotolerans
           SRS30216]
          Length = 279

 Score = 46.2 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 73/214 (34%), Gaps = 18/214 (8%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             +    A+ T+       +  S + + R    +++       V  + +   + + + + 
Sbjct: 56  PGLSPVQALATNKLGSIFGTTTSALTYYRRARPDLRTALPMAAVALVGSFGGASIAAALP 115

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY-----VKYIWGMVTGFLSGALGVGG 177
            +       +  + + ++ L R  L        +           G+  G   G LG G 
Sbjct: 116 VAVFKPVIVLALVTVAVITLLRPALGTTTALRFSGHAHYRAAIAVGLAVGVYDGVLGPGT 175

Query: 178 GIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G F  + M+   G    +A+A +  V+      ALL                 G V  G 
Sbjct: 176 GTFLVIAMVSLIGYDFVQASAKAKIVNFATNLGALLFFAPH------------GAVAWGL 223

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            +++   +   + L ++++   G +++   F ++
Sbjct: 224 GILLGLANTAGSYLGSRMAISSGTRFIRTAFLVV 257


>gi|262376558|ref|ZP_06069787.1| permease [Acinetobacter lwoffii SH145]
 gi|262308697|gb|EEY89831.1| permease [Acinetobacter lwoffii SH145]
          Length = 296

 Score = 46.2 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 82/262 (31%), Gaps = 50/262 (19%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L   F+       I  H+A+GT L   A +       H +   I   I+      
Sbjct: 28  LMTPILISLFR-------IEPHIAIGTDLLYAAISKFCGSFVHAKKMNIVWPIVIWLAVG 80

Query: 107 LPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGILMLKRD--------------- 145
               +  T  ++ +           L         + G+ +L R                
Sbjct: 81  SIPASFATHWVLENYLSQSTHYKAVLTMVLGFMLTITGLSILFRTQIENLFNKYRKQELP 140

Query: 146 ---------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
                    +L  + K     +  I   +   LS  +G G      L+++F    + +  
Sbjct: 141 DMTQDLEKVKLQAKEKRVAIIIMGIILGIFVTLSS-VGAGAFGIMALVVMFPNLPMIRII 199

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            +    + L+              + GL   S G V+   ++ +L  SI    + T LS 
Sbjct: 200 GSDVVHAVLLTL------------VAGLGHMSSGNVDFMLLMWLLVGSIPAIIVGTLLSS 247

Query: 257 MIGKKYLTIGFSMIMFTTSFVF 278
            + +K +     + +F     F
Sbjct: 248 RMPEKLIRKILGITLFALGVNF 269



 Score = 36.2 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 44/121 (36%), Gaps = 7/121 (5%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           VG G   +  L   F       ++ M   +G+ +      ++++ + H   G ++  +L 
Sbjct: 176 VGAGAFGIMALVVMF------PNLPMIRIIGSDVVHAVLLTLVAGLGHMSSGNVDFMLLM 229

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI 161
             +       +V +L+ S + +  + K   I    +G+  +    +  +   P      I
Sbjct: 230 WLLVGSIPAIIVGTLLSSRMPEKLIRKILGITLFALGVNFMINP-VKSKPAQPAETAMII 288

Query: 162 W 162
            
Sbjct: 289 V 289


>gi|19551390|ref|NP_599392.1| permease [Corynebacterium glutamicum ATCC 13032]
 gi|62389033|ref|YP_224435.1| permease [Corynebacterium glutamicum ATCC 13032]
 gi|41324366|emb|CAF18706.1| permease [Corynebacterium glutamicum ATCC 13032]
          Length = 260

 Score = 46.2 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 93/235 (39%), Gaps = 25/235 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++I  + ++G +  + G GGGLV++P++            +    A+ ++       +  
Sbjct: 12  ILIAGAAVAGWIDAVIG-GGGLVLIPLILAVM------PQLAPVTALASNKLAAVTGTAS 64

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +     R    + K+L  ++ V  + +   +L  S +DK  +     +  L++G++++ +
Sbjct: 65  AAFTLVRRVKPDKKLLALYVLVAAVCSGAGALAASLIDKQIMRPLIIVLMLVVGLIVVFK 124

Query: 145 DRLYC--ERKFPDNYVKYIWGMVTGFLS---GALGVGGGIFTNL-LMLFYGASIYKATAT 198
                   +  P  + ++   +  G ++   G  G G G+F  +        +   + A 
Sbjct: 125 PNFGTGESKALPTGWKRWAAIVAVGLIAAYDGIFGPGTGMFLIMAFTALLSQNFLSSAAM 184

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           +  V+      AL+V I  G        W+LG       L++   ++    L  +
Sbjct: 185 AKVVNTATNLGALIVFIIGGHM-----WWTLG-------LVLAVANVAGAQLGAR 227


>gi|291278616|ref|YP_003495451.1| hypothetical protein DEFDS_0184 [Deferribacter desulfuricans SSM1]
 gi|290753318|dbj|BAI79695.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 245

 Score = 46.2 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 75/200 (37%), Gaps = 14/200 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ +   +SG ++ + G GG  + +P+L      MG+  +    VA GT+   +   S+
Sbjct: 4   ILLFIVGVVSGFINVMAG-GGSFLTIPLLIF----MGLPPT----VANGTNRLGVFLQSL 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +  +  ++   N K          I  +  + + + +  +   K  AI  +++  + + 
Sbjct: 55  FAVRKFNQYKVFNPKFAIFVSIPATIGAIFGAYLATIISDAAFKKYLAIIMIVITFISIL 114

Query: 144 RDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
                 + K     F      +I     G   G +  G G      +   G ++ +  A 
Sbjct: 115 NPVKNVQSKEITYSFKRKVALFIVFFFIGIYGGFVQAGVGFLILAGITLTGFNLVEGNAI 174

Query: 199 SAGVSALIAFPALLVRIYSG 218
              V  +    AL++ I +G
Sbjct: 175 KTFVIMVFTIFALVIFIANG 194


>gi|21219144|ref|NP_624923.1| hypothetical protein SCO0611 [Streptomyces coelicolor A3(2)]
 gi|6448746|emb|CAB61305.1| putative membrane protein [Streptomyces coelicolor A3(2)]
          Length = 254

 Score = 46.2 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 81/222 (36%), Gaps = 30/222 (13%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN--------MKILKDWIFV 106
            F L G+  +       GT+L     T +++   + R G +         + +    +  
Sbjct: 37  LFALTGLTPAQVA----GTALVTHVATGMLATAAYTRSGQLREPGTRRTALVLAVSAVAG 92

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD--RLYCERKFPDNYVKYIWGM 164
            P+  +V S +   +    L     +F   +  L+  R+  R    R  P   V    G 
Sbjct: 93  TPLGVLVNSYVSKRMFGLVL----GVFVAGVAGLVWFREHRRPAGSRAHPPTAVVAGTGC 148

Query: 165 VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
                +G +G+GG + T  L++  G  + ++ A++   S +IA    +  +         
Sbjct: 149 AVAVAAGVVGIGGPMLTVPLLVALGVPVLESLASAQAQSVVIAGVGTVGYLAQ------- 201

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
                G V+    +++    +    L  ++++ +  ++L   
Sbjct: 202 -----GAVDWPLAVLVGVPELAGVLLGWRIAHALPTRHLKYA 238


>gi|153956125|ref|YP_001396890.1| hypothetical protein CKL_3528 [Clostridium kluyveri DSM 555]
 gi|219856457|ref|YP_002473579.1| hypothetical protein CKR_3114 [Clostridium kluyveri NBRC 12016]
 gi|146348983|gb|EDK35519.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219570181|dbj|BAH08165.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 120

 Score = 46.2 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 8/124 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-T 81
           + + I     +G LSGLFGVGGG++++P L                 A GTSL  + P  
Sbjct: 4   VMIFITIGIAAGILSGLFGVGGGIIIIPALMFF-------KGFSQLKAQGTSLIAMLPPV 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            +++F+E+ + G  ++         + ++      + + +  + + +AF IF +L+GI  
Sbjct: 57  GILAFIEYYKKGNTDLVGGIIICSAMLLSAKFGGQLANMLPMNVMKRAFGIFVILVGIKT 116

Query: 142 LKRD 145
               
Sbjct: 117 FFGK 120


>gi|330837472|ref|YP_004412113.1| hypothetical protein Spico_1528 [Spirochaeta coccoides DSM 17374]
 gi|329749375|gb|AEC02731.1| protein of unknown function DUF81 [Spirochaeta coccoides DSM 17374]
          Length = 250

 Score = 46.2 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 79/199 (39%), Gaps = 14/199 (7%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+I   F++G +  + G GGGL+       A+ + G+      H+A+GT+       + +
Sbjct: 8   LLIFLIFMAGLVDSIAG-GGGLIS----LAAYSVFGLPP----HLALGTNKFASCSGTTV 58

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + + + R   +  +          + ++V + ++  V+   ++    +   ++ +  L  
Sbjct: 59  AALRYIRAKDVVWRTALSAALCSGLGSLVGARLVLTVEPRIVSILMLVLTPVLAVFTLVN 118

Query: 145 DRL-YCERKFPDNYVK---YIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATS 199
             L    R  P +       + G+  G   G  G G G+F  L      G  I KA   +
Sbjct: 119 KNLGKASRDIPASRALVMSLVLGLAVGCYDGFFGPGSGMFLTLGFTALVGLEIEKACGNT 178

Query: 200 AGVSALIAFPALLVRIYSG 218
             V+      AL + I +G
Sbjct: 179 KIVNLASNIGALTIFIING 197


>gi|325685616|gb|EGD27702.1| permease [Lactobacillus delbrueckii subsp. lactis DSM 20072]
          Length = 253

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 76/258 (29%), Gaps = 24/258 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              +I+   L+G ++ +  +   LV  P L   F L  +  ++       T+   +  T 
Sbjct: 10  FIYLIILGVLAGIVAAVASM-ASLVSYPGLL-LFGLSPVSANM-------TNTAALVTTG 60

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S     +    +   L  + F      ++   ++         K    F L    L+L
Sbjct: 61  FGSLSSCLKEMRGHWGELWRYAFFQLTGALIGGWLLVQFPGKIFQKLVPFFVLFSAGLLL 120

Query: 143 KRDRLYCERKF--PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT-ATS 199
              R    ++         Y    V G  +G  G   G+ T + +     S +    A  
Sbjct: 121 YSGRQKQPKQATKLGRIGAYFGLFVAGIYAGYFGAASGVLTLIFLTALSDSSFVVINAIK 180

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           + + +L    AL +  + G             VN      +     +      K+   + 
Sbjct: 181 SVIGSLANLVALALFAFKGG------------VNWPVAFPLAIGLFIGGYFGQKMIKYLK 228

Query: 260 KKYLTIGFSMIMFTTSFV 277
             ++    +      +  
Sbjct: 229 PAWVRWITACFSVLLAVY 246



 Score = 39.7 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 13/117 (11%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT---SLGVIAPTSVM 84
              F++G  +G FG   G     VL+  F     D S  +  A+ +   SL  +   ++ 
Sbjct: 141 FGLFVAGIYAGYFGAASG-----VLTLIFLTALSDSSFVVINAIKSVIGSLANLVALALF 195

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +F      G +N  +       L I       MI ++  +++    A F +L+ + +
Sbjct: 196 AF-----KGGVNWPVAFPLAIGLFIGGYFGQKMIKYLKPAWVRWITACFSVLLAVYL 247


>gi|152992907|ref|YP_001358628.1| hypothetical protein SUN_1318 [Sulfurovum sp. NBC37-1]
 gi|151424768|dbj|BAF72271.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 247

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 74/196 (37%), Gaps = 11/196 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++     G++SG FG+GGG+++VP+L              +  A+G S+  +  +SV  
Sbjct: 5   LLLVGIFIGSMSGFFGIGGGMILVPILLAI--------GFEIKDAIGISIIQMVFSSVYG 56

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              + + G++ +               +   +  +V  + L   F    L     +    
Sbjct: 57  SYLNHKKGSLIVGEGIFVGIGGFAGGYLGGYVTHYVSDTVLQILFLGILLFALFRLFFSK 116

Query: 146 RL--YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGV 202
                   K  +  + +  G++ G  S  LG+GG I    +++      + KA +     
Sbjct: 117 MHIDDSHSKTLNKGLLFFIGLLIGIFSITLGIGGSIILTPILVGLLHYPLKKAISAGLFF 176

Query: 203 SALIAFPALLVRIYSG 218
               +   ++ R+  G
Sbjct: 177 VVFSSIAGMISRLMIG 192



 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+     L G  S   G+GG +++ P+L              +  A+   L  +  +S+ 
Sbjct: 131 LLFFIGLLIGIFSITLGIGGSIILTPILVGLLHY-------PLKKAISAGLFFVVFSSIA 183

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +     GTI+ +          +       +  HV  +    A  +  L+  ++++++
Sbjct: 184 GMISRLMIGTIDFQNGLIVAVASLVGVFGGIWLKDHVHDTHHKSALMLLYLISLVILVRK 243


>gi|255074089|ref|XP_002500719.1| 4-toluene sulfonate uptake permease [Micromonas sp. RCC299]
 gi|226515982|gb|ACO61977.1| 4-toluene sulfonate uptake permease [Micromonas sp. RCC299]
          Length = 370

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 44/118 (37%), Gaps = 8/118 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G L G  G+GGG+++          M +   + +H    T+L     T+    
Sbjct: 260 LILGIAVGLLQGTVGIGGGVLVT-------TYMSVATDMEVHRICATALMATLVTNTAVC 312

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMGILMLK 143
             H  +G + +++           + VT+  +   V +  +    A   +  G+ M +
Sbjct: 313 THHFVNGNVRLRVAAVLGASAMAASYVTAKNVSLAVPEPVIRGFIAAALVASGVSMFR 370



 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 34/117 (29%), Gaps = 12/117 (10%)

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
               G   G LS   G+GG +         G +  K   TS            +    + 
Sbjct: 30  TSATGASAGALSALTGLGGAVIFVPACKQLGMTAKKIIGTSVVAVTCATTAGSIAYTQNN 89

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                          I A + I  +    TP+  +++  +  K L +   + +   +
Sbjct: 90  VTD------------IPAAVAIGAVGAATTPIGQRIAKGVSGKTLRVWCGVALLACA 134



 Score = 38.9 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 8/125 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
                +G LS L G+GG ++ VP      + +G+         +GTS+  +   +    +
Sbjct: 32  ATGASAGALSALTGLGGAVIFVPA----CKQLGMTAKKI----IGTSVVAVTCATTAGSI 83

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            + ++   ++        V   TT +   +   V    L     +  L        +   
Sbjct: 84  AYTQNNVTDIPAAVAIGAVGAATTPIGQRIAKGVSGKTLRVWCGVALLACAPTAFMKKEK 143

Query: 148 YCERK 152
           +   +
Sbjct: 144 HESTQ 148


>gi|254513249|ref|ZP_05125314.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
 gi|221532253|gb|EEE35249.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
          Length = 320

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 100/273 (36%), Gaps = 37/273 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
               +    +  ++   GVGGG+V +PV    F  +G+  +      + TS+ +      
Sbjct: 61  LAYFLVGICAALVANSTGVGGGVVFLPV----FISLGVSPAEV----LATSIAIQCFGMT 112

Query: 84  MSFMEHRRHGTIN-------MKILKDWIFVLPITTVVTSLMISHVDKSF---LNKAFAIF 133
              +   ++  +               +++  +   +    +     +    +   F+IF
Sbjct: 113 SGSLSWLQYRFVKRMEEEQGWSQFWPILWMSTLCAFIGVACVQAFSPTPPCDIKLLFSIF 172

Query: 134 CLLMGILMLKRDRLYCERK------FPDNYVKYIW--GMVTGFLSGALGVGGGIFTNLLM 185
            +++G L++       +         P  +  YI   G   G ++  + +G G    + +
Sbjct: 173 SIVVGCLIVLTTIKRRQLSKGSVGVMPYQHAIYIVASGFAGGAITAWISIGVGEILAICL 232

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           +  G  +  A A +  V A   F AL   +              G VN+  ++   P ++
Sbjct: 233 ILLGYRLNMAIALAVCVGAATVFFALPFHLSVP-----------GLVNVQLLVCAAPGAL 281

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +   +A K++  IG   + +  ++ +  ++ VF
Sbjct: 282 IGGAVARKITVAIGANRMKLLMALWIIFSAAVF 314


>gi|332704430|ref|ZP_08424518.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332554579|gb|EGJ51623.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 427

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 93/281 (33%), Gaps = 74/281 (26%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IV    +G ++G  G GGG ++ P L        +   I   +A+GT L  I   ++M  
Sbjct: 82  IVIGLCAGLITGCIGAGGGFIITPAL--------MSAGIKGILAVGTDLFHIFAKAIMGT 133

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISH-------VDKSFLNKAFAIFCLLMGI 139
             H++ G +++ +   ++    +      L+          +  +F++  + +    +G 
Sbjct: 134 AVHKKLGNVSVALAIWFLVGSGVGVTGGGLINRALYEFNPILSDAFISVVYVVLLGFLGF 193

Query: 140 LML-----------------------------------------------KRDRLYCERK 152
             L                                                 + L    K
Sbjct: 194 YSLFDFLKLRKSGEDVGAHHGASKHGTEAASGKKGLPATLQASKIPPYITFDEDLVPGGK 253

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                   I G + GF++  +GVGGG  T  + ++             GVS+       +
Sbjct: 254 RIPALYVAICGAIVGFMAAIMGVGGGFLTFPIFVYV-----------LGVSSFTTVGTDI 302

Query: 213 VRIYSGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLAT 252
           ++I    G   +  +++ GF+     + +L  S+L   L  
Sbjct: 303 LQIIFTAGYASITQYAIYGFIFYTLAMGMLIGSLLGIQLGA 343



 Score = 42.0 bits (98), Expect = 0.094,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 43/121 (35%), Gaps = 8/121 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS- 82
             + +   + G ++ + GVGGG +  P+      +            +GT +  I  T+ 
Sbjct: 258 LYVAICGAIVGFMAAIMGVGGGFLTFPIFVYVLGVSSFTT-------VGTDILQIIFTAG 310

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S  ++  +G I   +    +    +   + +L    V   ++   +A   L   +  L
Sbjct: 311 YASITQYAIYGFIFYTLAMGMLIGSLLGIQLGALTTKVVKGIYIRGFYATAILAGFVNRL 370

Query: 143 K 143
            
Sbjct: 371 F 371


>gi|288817763|ref|YP_003432110.1| predicted permease [Hydrogenobacter thermophilus TK-6]
 gi|288787162|dbj|BAI68909.1| predicted permease [Hydrogenobacter thermophilus TK-6]
 gi|308751361|gb|ADO44844.1| protein of unknown function DUF81 [Hydrogenobacter thermophilus
           TK-6]
          Length = 249

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 86/261 (32%), Gaps = 33/261 (12%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            ++  F      GL GVG G +  PVL            +    A+G++L          
Sbjct: 4   YLLLGFFIAFAIGLTGVGAGTLTAPVLILL--------GLNPAQAVGSALSFSTLVKFPG 55

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-DKSFLNKAFAIFCLLMGIL---- 140
           F+ H  +  +  ++L    F      ++ S ++S +     L         +  IL    
Sbjct: 56  FLFHALYKNVEYRLLMFMCFGGVPGVLLGSSLLSRLSQADKLKNLIMFIIGITVILLVIL 115

Query: 141 ----MLKRDRLYCERKF-PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
                L + R+   R F     V +  G+  GF S   G  G     LL+ F      KA
Sbjct: 116 NLLGTLMKRRIDLTRYFYLIPLVCFFIGLEVGFTSAGAGALG---MVLLLYFTRLPPSKA 172

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
                G     +    L  +  G     +             L +    +L   L T L+
Sbjct: 173 VGVDIGFGLACSLTGSLAHLLQGHTQPHV------------FLPMSLGGLLGIWLGTHLT 220

Query: 256 YMIGKKYLTIGFSMIMFTTSF 276
             I  K L +G SM++   +F
Sbjct: 221 RRINPKPLRVGISMLLILVAF 241


>gi|119946050|ref|YP_943730.1| hypothetical protein Ping_2398 [Psychromonas ingrahamii 37]
 gi|119864654|gb|ABM04131.1| hypothetical protein DUF81 [Psychromonas ingrahamii 37]
          Length = 252

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 91/256 (35%), Gaps = 23/256 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +    I A  + G   G FG   G++ VP++S           I    A    L ++   
Sbjct: 8   FYATAIPAVLIYGISKGGFGGALGIIAVPLMSMV---------IVASQAAAILLPILCVM 58

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              +  +H RH   +  +L+  +    I   +  L +S   +S L        L   +  
Sbjct: 59  DFFAVKQHYRHA--DYGLLRGMLPGSLIGVALAGLFLSVTPESGLKLLIGGLSLFFCLQY 116

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +       +++       + W +++GF S A+  GGG   ++ +L          AT A 
Sbjct: 117 IALGADKQKKR--GTLSAWFWSLMSGFSSTAIHAGGGP-ASIYLLPLKLDKIVFVATMAV 173

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           +  ++    L+     G              N+   L+++P++ +   +   L + + + 
Sbjct: 174 LLGVLNLFKLIPYSLLGGFNQT---------NLMTSLVLMPLAPVGVKIGVWLLHRVSQP 224

Query: 262 YLTIGFSMIMFTTSFV 277
            +     + +F +   
Sbjct: 225 LVYRLCYIFLFLSGCK 240


>gi|261839499|gb|ACX99264.1| hypothetical protein HPKB_0670 [Helicobacter pylori 52]
          Length = 255

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 72/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    L I     +G LSG+FG+                + +        ++G S+  +A
Sbjct: 1   MGIYALYIAIGLFTGILSGIFGI--------GGGMIIVPIMLATGHSFEESIGISILQMA 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFVLKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPKKKDFIADTKRYPLQGLKLFLIGTLTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       IY 
Sbjct: 173 KCVALGLFFILFSSISGAFSLIYH 196


>gi|255065394|ref|ZP_05317249.1| putative membrane protein [Neisseria sicca ATCC 29256]
 gi|255050219|gb|EET45683.1| putative membrane protein [Neisseria sicca ATCC 29256]
          Length = 266

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 79/218 (36%), Gaps = 15/218 (6%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
              +   +  D     + L++ AS ++G +  + G G GL+++P              + 
Sbjct: 3   QLFIPGSIIADYFYLGLFLLVAASLIAGYVDAIAG-GAGLILIPAFLMV--------GLP 53

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
             VA+     V    +V +     +  +I  +I+   I    I   V + +I  +    +
Sbjct: 54  PQVALAQEKLVSTIGTVAAIKNFMKSSSIVWRIVPVGIVAALIGAFVGAKVILILPVETI 113

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM-----VTGFLSGALGVG-GGIF 180
           N     F  +  +  L +  L  +        K    +     + GF  G  G G G IF
Sbjct: 114 NYIILAFLPIGLLATLFKGVLLKKDDERGEIKKSAVAVFLTCLIVGFYDGFFGPGTGSIF 173

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
              L +    S+ +A+ATS   +      A +  + +G
Sbjct: 174 IIALFVINKLSLLQASATSKIFNFASNIGAFVAFLIAG 211


>gi|50119891|ref|YP_049058.1| hypothetical protein ECA0949 [Pectobacterium atrosepticum SCRI1043]
 gi|49610417|emb|CAG73861.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
          Length = 254

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 91/254 (35%), Gaps = 25/254 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++I  +F++G ++   G GGGL+ +P+            +  M +   +S        
Sbjct: 5   LFILIPIAFIAGAINAAVG-GGGLISMPMFYSTLPH--FTPAQIMGIDKFSS----VMGH 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +MS  +      +  +++   +        +   M+  +  S++     +   +M     
Sbjct: 58  LMSIRQFAARLRLPWRLMLPTVLSAITGAYIGIRMLDFMPSSWMRPVIIVVLAIMVAYTW 117

Query: 143 KRDRLYC-----ERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            R          E    D       G++ GF  G +G G G     L + F+     +AT
Sbjct: 118 FRPSFGSQDTSREPTQSDLIKGAALGLIIGFYDGFIGPGTGSFLLFLFVRFFHFDFLRAT 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A +  V+       L+  I +G             +N G  L +   +I  +   T+L+ 
Sbjct: 178 ACAKVVNFGTNSATLIFLIPAGL------------INYGLALPLGIAAIFGSIAGTQLAL 225

Query: 257 MIGKKYLTIGFSMI 270
             G  ++   F ++
Sbjct: 226 KGGNYWIRRLFLIL 239


>gi|302039194|ref|YP_003799516.1| hypothetical protein NIDE3920 [Candidatus Nitrospira defluvii]
 gi|300607258|emb|CBK43591.1| conserved membrane protein of unknown function DUF81 [Candidatus
           Nitrospira defluvii]
          Length = 267

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 96/270 (35%), Gaps = 30/270 (11%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++D     ++A    G   G  G GG ++ VP++            I +  A   SL ++
Sbjct: 1   MIDQAIRSVLAGVPMGLQLGATGTGGAILGVPMMVYI-------AGIPVRQAAAMSLMIV 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM- 137
           A +S++   E+ RHG +  K    + +         +     V    L   F +  LL  
Sbjct: 54  ATSSLLGAWEYGRHGLVKPKAAAAFSWTGMAGAWAGAFGHHLVPDEVLLICFGLLLLLTR 113

Query: 138 -------GILMLKRDRLYCERKFPDNYVK--YIWGMVTGFLSGALGVGGGIFTNLLM-LF 187
                   ++     +  C   FP          G+V G L+G  GVGGG      + + 
Sbjct: 114 TLVSRQRALMSQTEPQEGCATHFPRTCWLKVGAIGLVVGTLNGVFGVGGGFLVVPALSVV 173

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
            G     A  TS  + +LI+   ++  +              G ++     ++L  S+  
Sbjct: 174 LGFPTRVAIGTSLTIISLISLSGVIGHL------------QFGRIDWPLTGLVLVGSLSG 221

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             +  ++  ++    +    + +  T + +
Sbjct: 222 MLVGVRVGALLSPTTMGRITATVTVTIAMI 251



 Score = 39.7 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 37/86 (43%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
             + +       VA+GTSL +I+  S+   + H + G I+  +    +       +V   
Sbjct: 168 PALSVVLGFPTRVAIGTSLTIISLISLSGVIGHLQFGRIDWPLTGLVLVGSLSGMLVGVR 227

Query: 117 MISHVDKSFLNKAFAIFCLLMGILML 142
           + + +  + + +  A   + + ++++
Sbjct: 228 VGALLSPTTMGRITATVTVTIAMILI 253


>gi|325275340|ref|ZP_08141291.1| hypothetical protein G1E_18550 [Pseudomonas sp. TJI-51]
 gi|324099531|gb|EGB97426.1| hypothetical protein G1E_18550 [Pseudomonas sp. TJI-51]
          Length = 272

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 11/123 (8%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
              +    G + G +    G GGGI    L++F             G+S + A P  L+ 
Sbjct: 4   TQLLGAALGAIIGAVLALTGAGGGILAVPLLVF-----------GLGLSMVEAAPVGLLA 52

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           +     +  +     G V   A L I  I +   PL   L++ +    L + F+ ++   
Sbjct: 53  VGLAAAVGAVLGLRRGLVRYRAALFIALIGVAAAPLGLMLAHRLPNTPLQLVFAGVLTYA 112

Query: 275 SFV 277
              
Sbjct: 113 CLR 115



 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 43/126 (34%), Gaps = 7/126 (5%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +++   L      + G +  L G GGG++ VP+L            + M  A    L  +
Sbjct: 1   MIETQLLGAALGAIIGAVLALTGAGGGILAVPLLVFGL-------GLSMVEAAPVGLLAV 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              + +  +   R G +  +       +      +  ++   +  + L   FA       
Sbjct: 54  GLAAAVGAVLGLRRGLVRYRAALFIALIGVAAAPLGLMLAHRLPNTPLQLVFAGVLTYAC 113

Query: 139 ILMLKR 144
           + + ++
Sbjct: 114 LRIWRK 119



 Score = 35.8 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 29/78 (37%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +    ++ M   + TSL VIA  S  S +     G ++ ++   +     +  +
Sbjct: 177 FVIIPALNRYTNLRMATIVSTSLAVIALVSAGSVISASLAGVLHWQVGGPFAVGAVLGLL 236

Query: 113 VTSLMISHVDKSFLNKAF 130
           +   + + +    L + F
Sbjct: 237 LARPLAARLAGPRLQQMF 254


>gi|320168705|gb|EFW45604.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 590

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 43/119 (36%), Gaps = 5/119 (4%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
               +A   SG L GLFGVGG     P L     L G+D          TS+  +   + 
Sbjct: 431 IFTAIAGVTSGFLRGLFGVGG-----PPLMVYVSLSGLDKKPLRATVTATSMVTLPILTG 485

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              +   R  +         +    +  ++ +L+    + + + +   +  ++  + M+
Sbjct: 486 YLLIYEGRLKSDEWPRYLTAVCCSCVGLLIGNLLFKKFNTATVLRFILVLLVVAAMTMM 544



 Score = 35.8 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 44/131 (33%), Gaps = 3/131 (2%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  I V++FLSG   GL   G  +V            GI       + +G  L  I    
Sbjct: 155 VLCIGVSAFLSGVAMGLTSFGSAIVFHLCWQLFLLFSGIAHDDLSQL-VG--LLAIMDWG 211

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  + +     ++  IL   +  + +TT + S ++       L     I  ++     +
Sbjct: 212 TVPPLLYICWKDVDATILGYLVVPMAVTTALGSYILVTTPPDILKLILGIIFIVFATWRI 271

Query: 143 KRDRLYCERKF 153
             +     R  
Sbjct: 272 LLEVFQSPRGM 282


>gi|118497980|ref|YP_899030.1| hypothetical protein FTN_1406 [Francisella tularensis subsp.
           novicida U112]
 gi|118423886|gb|ABK90276.1| conserved hypothetical membrane protein [Francisella novicida U112]
          Length = 258

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 84/200 (42%), Gaps = 15/200 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMHVAMGTSLGVIAPTS 82
             I+   FL+  +  + G GGGL+ +P LS     ++ +  +     ++GT + V     
Sbjct: 14  VFIVSMGFLASFIDAIAG-GGGLISIPALSLTGLPIVTVLGTNKFQASIGTGMAV----- 67

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               +++ + G I++K +   +    I     +L+   +   F+N    I  + + I  +
Sbjct: 68  ----LKYYKSGLIDIKTVVRGLVAGFIGACCGTLLTLLIHNDFMNNIVPILLIAVFIFSI 123

Query: 143 KRDRL---YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATAT 198
               L     +++  +     ++G + G   G  G G G F  + ++++ G +  +A+  
Sbjct: 124 VNKNLGVAQGKKRMSEVAFFTLFGFILGAYDGFFGPGTGNFWIIAIVYFLGYTFLQASGY 183

Query: 199 SAGVSALIAFPALLVRIYSG 218
           +  ++      +L V   SG
Sbjct: 184 AKMLNLKSNVFSLTVFALSG 203


>gi|226329568|ref|ZP_03805086.1| hypothetical protein PROPEN_03477 [Proteus penneri ATCC 35198]
 gi|225202754|gb|EEG85108.1| hypothetical protein PROPEN_03477 [Proteus penneri ATCC 35198]
          Length = 173

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 54/154 (35%), Gaps = 14/154 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + ++  F +  + G+ G G  L+  PVL+    L  I             L  +   S
Sbjct: 10  LFICLLTLFFAYVIFGMAGFGSALIAGPVLALYLPLSMIVP-----------LLALIDLS 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                  R     + K ++  I ++ I ++V + ++       L+    IF     I  L
Sbjct: 59  AAIVNIFRDGKQADFKEIRYLIPLIIIGSLVGATILLTTRPDLLSLLLGIFATCYAIYAL 118

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
                  +       + Y +G++ G  S   G G
Sbjct: 119 F---WKKQESQFSQRLVYPFGLIGGVFSALFGSG 149


>gi|116511956|ref|YP_809172.1| hypothetical protein LACR_1219 [Lactococcus lactis subsp. cremoris
           SK11]
 gi|116107610|gb|ABJ72750.1| Lysyl-tRNA synthetase (class II) [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 917

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 68/193 (35%), Gaps = 37/193 (19%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKA---FQLMGIDDSICMHVAMG 72
           ++     + +++  + +   + GL G     +M PV         L G+     +  A  
Sbjct: 21  QETAAKLLGILLQFASIYALIVGLVG----WLMPPVQKFISGFLYLFGLPTDFSIFNA-- 74

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK--------- 123
                I    + S + HRR   + ++++      + +  +    + S+            
Sbjct: 75  -----IVLFILASSIRHRRRLALWIEVIYFQFAFVILGII---FLASYFSGLVSKETLEA 126

Query: 124 ---SFLNKAFAIFCLLMG----ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
              S L+ +F I  +L+     I+M+     +  +     + K +     GF+S    +G
Sbjct: 127 ANFSILSLSFVILGVLISLATVIVMILSRNAFPTKIVNGTWWKALIIATGGFVSSI--IG 184

Query: 177 GGIFTNLLMLFYG 189
           G       + ++G
Sbjct: 185 G--VVASYLTYHG 195


>gi|330964280|gb|EGH64540.1| hypothetical protein PSYAC_06440 [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 270

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 15/119 (12%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
           + V    G++ G +    G GGGI    L++F             G+   I   A +  +
Sbjct: 5   SLVGAGLGVIIGAVLALTGAGGGILAVPLLVF-------------GLGLTIVEAAPVGLL 51

Query: 216 YSGWGLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             G          L  G V   A   I  I +L+ P+   L++ +    L + FS ++ 
Sbjct: 52  AVGLAAGVGAVLGLRQGIVRYRAAGYIAGIGVLMAPIGLWLAHRLPNTPLALIFSAVLL 110



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 51/143 (35%), Gaps = 7/143 (4%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++D+  +      + G +  L G GGG++ VP+L     L  ++ +    +A+G + GV 
Sbjct: 1   MIDHSLVGAGLGVIIGAVLALTGAGGGILAVPLLVFGLGLTIVEAAPVGLLAVGLAAGVG 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           A   +       R G +  +       +  +   +   +   +  + L   F+   L   
Sbjct: 61  AVLGL-------RQGIVRYRAAGYIAGIGVLMAPIGLWLAHRLPNTPLALIFSAVLLYAC 113

Query: 139 ILMLKRDRLYCERKFPDNYVKYI 161
             +  R         P    + +
Sbjct: 114 GRIFIRASRELRDGRPAPRAQML 136



 Score = 39.7 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 39/98 (39%), Gaps = 7/98 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V++P L++          + +   + TSL VIA  S  S +     G ++  +   +  
Sbjct: 177 FVIIPALTRY-------SDLDVKSVVATSLAVIALVSTGSVIIASLSGVMHWAVGAPFAL 229

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                 +    +  ++    L + FA+  ++  ++++ 
Sbjct: 230 GAVAGLLGGRQVARYLAGPRLQQLFAVCGIVAALMLVF 267


>gi|78189916|ref|YP_380254.1| hypothetical protein Cag_1963 [Chlorobium chlorochromatii CaD3]
 gi|78172115|gb|ABB29211.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
          Length = 305

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 102/285 (35%), Gaps = 48/285 (16%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++  +   SF  G ++ + GVGGG++ VP++S  F          +    G  L V    
Sbjct: 32  WVLGLFTFSFFLGIIAVIAGVGGGVLFVPIVSSFFPF-------HIDFVRGAGLLVALAG 84

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ +     R G  N+K+      +  I+++  +++   + ++ +  +     L + ++M
Sbjct: 85  ALSAGAPLLRKGLANLKLALSMALIGSISSIAGAMVGLALPENIVQLSLGATILFISVIM 144

Query: 142 LKRD----------------------------RLYCERKFPDNYVKYIWGMVTGFLSGAL 173
           L                               +     +     +  +  +V GF++G  
Sbjct: 145 LLSKNSAYPDISKPDSLSQALHIHGIYYDEQLKKDVSWQIHRTPIGLLLFIVIGFMAGMF 204

Query: 174 GVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+G G     +     GA +  + ATS  V ++    A  V ++ G             +
Sbjct: 205 GLGAGWANVPVFNLVLGAPLRVSVATSVFVLSINDTAAAWVYLHQGAV-----------L 253

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           ++ AV  +  + +L T +  KL   +    +      ++      
Sbjct: 254 SLIAVPSVAGM-MLGTKIGAKLLTKVHTSVVRWIVIALLAGAGLK 297



 Score = 44.7 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 49/125 (39%), Gaps = 7/125 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    + ++   + G ++G+FG+G G   VPV +             + V++ TS+ V++
Sbjct: 184 IHRTPIGLLLFIVIGFMAGMFGLGAGWANVPVFNLVLGA-------PLRVSVATSVFVLS 236

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                +   +   G +   I    +  + + T + + +++ V  S +           G+
Sbjct: 237 INDTAAAWVYLHQGAVLSLIAVPSVAGMMLGTKIGAKLLTKVHTSVVRWIVIALLAGAGL 296

Query: 140 LMLKR 144
               +
Sbjct: 297 KAFLK 301


>gi|109899155|ref|YP_662410.1| hypothetical protein Patl_2846 [Pseudoalteromonas atlantica T6c]
 gi|109701436|gb|ABG41356.1| protein of unknown function DUF81 [Pseudoalteromonas atlantica T6c]
          Length = 335

 Score = 45.8 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 68/184 (36%), Gaps = 20/184 (10%)

Query: 104 IFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK------RDRLYCERKFPDNY 157
           I  L I     +          L+  F +F +L+ I M        R  L    +  D+ 
Sbjct: 163 IVGLLIAQFNPNWFGVLAQGDKLHIGFGVFSILLAISMFLMVTMAGRSTLKLRLRPLDSI 222

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +  I  +  G ++  L +G G    + ++  G ++  + A +  +SA+  +  ++  +  
Sbjct: 223 LLPIICICGGVITAYLSIGVGELVAVYLIMRGFNVTFSIACAVILSAVTVWSGVVHHVLM 282

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS---MIMFTT 274
                         +    VL   P +++   LA +L       +L + F+   +++  +
Sbjct: 283 THA-----------IYWPVVLFAGPGAVVGGILAKRLVLHFSPTHLKLFFASWILVLGVS 331

Query: 275 SFVF 278
             VF
Sbjct: 332 GLVF 335


>gi|227496184|ref|ZP_03926490.1| protein of hypothetical function DUF81 [Actinomyces urogenitalis
           DSM 15434]
 gi|226834267|gb|EEH66650.1| protein of hypothetical function DUF81 [Actinomyces urogenitalis
           DSM 15434]
          Length = 268

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 7/117 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +   +    ++G LSGLFGVGGGLV+VP L            +    A  TSL  I  T+
Sbjct: 14  VVATLATGLVAGFLSGLFGVGGGLVIVPALMAVL-------GMDQRRAAATSLAAIVVTA 66

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +    +   G I++      +    +   + + ++  + +  L      F  L+ I
Sbjct: 67  AVGSASYAARGEISVVGAGVLVAGSLLGAQLGTWLLRRLPERVLPWTLIGFVALVII 123



 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 16/126 (12%)

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPAL 211
            P        G+V GFLSG  GVGGG+     LM   G    +A ATS     + A    
Sbjct: 11  LPGVVATLATGLVAGFLSGLFGVGGGLVIVPALMAVLGMDQRRAAATSLAAIVVTAAVGS 70

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL---TIGFS 268
                 G             +++    +++  S+L   L T L   + ++ L    IGF 
Sbjct: 71  ASYAARGE------------ISVVGAGVLVAGSLLGAQLGTWLLRRLPERVLPWTLIGFV 118

Query: 269 MIMFTT 274
            ++  T
Sbjct: 119 ALVIIT 124


>gi|77920603|ref|YP_358418.1| hypothetical protein Pcar_3013 [Pelobacter carbinolicus DSM 2380]
 gi|77546686|gb|ABA90248.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 251

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 72/202 (35%), Gaps = 14/202 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++  + +   ++G L+ L G GG L+ +P+L            +    A GT+   I   
Sbjct: 8   HMVFLALVGVMAGILNVLAG-GGSLLTLPLLIFM--------GLPAATANGTNRIAILVQ 58

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ +     RHG ++ ++           + + + +   VD++   +  A   L +  L 
Sbjct: 59  NLFAISGFHRHGVLSWRLAMVCAGPAIAGSYLGARLALQVDEALFRQLLAGIMLGVLALT 118

Query: 142 L----KRDRLYCERKFPDNYVKYIWGMV-TGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           L    K  +    R  P      +      G   G +  G G      +LF G  + +  
Sbjct: 119 LWDPMKERQAQAVRLSPGRLAVLLASFFMVGVYGGFVQAGVGFLIIAALLFQGLDLVQTN 178

Query: 197 ATSAGVSALIAFPALLVRIYSG 218
           A    +       AL V +  G
Sbjct: 179 AIKVTIICFFTLVALAVFMRHG 200


>gi|317125359|ref|YP_004099471.1| hypothetical protein Intca_2235 [Intrasporangium calvum DSM 43043]
 gi|315589447|gb|ADU48744.1| protein of unknown function DUF81 [Intrasporangium calvum DSM
           43043]
          Length = 261

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 92/263 (34%), Gaps = 25/263 (9%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  D     + L+ +A F++G +  + G GG       L +   L+           + T
Sbjct: 1   MPDDLTPTVLALLALAGFVAGWIDAVVGGGG-------LVQLPALLLGLPGATPAQLLAT 53

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       +  S + + R    +++       V  +  +  +++  H+ KS  N    + 
Sbjct: 54  NKISSIFGTATSSVTYFRRVGADLRTALPMAAVAYLGAIGGAVIGLHIPKSAFNPIILVL 113

Query: 134 CLLMGILMLKRDRLYCE-----RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-F 187
            +++G   L R  L  E            +  + G V G   GALG G G F    ++  
Sbjct: 114 LVVVGAYTLFRPDLGRESLRRFHGHRHVALAMLTGFVIGVYDGALGPGTGSFLVFALVGL 173

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
            G +  +A+  +   +      AL V                G V     L++   +IL 
Sbjct: 174 LGYTFLEASVKAKIANFATNLGALTVFAPG------------GHVVWQVGLLMAVGNILG 221

Query: 248 TPLATKLSYMIGKKYLTIGFSMI 270
             +  + +   G  ++   F +I
Sbjct: 222 GYVGARTAVARGSGFVRAVFVVI 244


>gi|189218632|ref|YP_001939273.1| permease [Methylacidiphilum infernorum V4]
 gi|189185490|gb|ACD82675.1| Predicted permease [Methylacidiphilum infernorum V4]
          Length = 267

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           Y+ G V  FL G  GVGGG  T  L++  G     A   S G SALI  P+ +V  + G 
Sbjct: 23  YLIGFVIAFLIGLTGVGGGTITVPLLIILGIEPSIAVGISLGFSALIKIPSSIVYFFKG- 81

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISIL 246
               +   +L +++IG +  ++  S+L
Sbjct: 82  ---HIEKKTLFYLSIGGIPGVVLGSLL 105



 Score = 43.5 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 75/205 (36%), Gaps = 13/205 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             +  F+   L GL GVGGG + VP+L       GI+ SI + +++G S  +  P+S++ 
Sbjct: 22  FYLIGFVIAFLIGLTGVGGGTITVPLLIIL----GIEPSIAVGISLGFSALIKIPSSIVY 77

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMI--SHVDKSFLNKA---FAIFCLLMGIL 140
           F +          +    I  + + +++   +   +H+    L        +  L+    
Sbjct: 78  FFKGHIEKKTLFYLSIGGIPGVVLGSLLLGNIYRHNHLRSVILLMIGLTIVVSSLINLWY 137

Query: 141 MLKRDRLYCER-KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            LK  R    +         ++ G   G  S   G    + T LL+     S      T 
Sbjct: 138 TLKDYRPTTNKYALLLPLFAFLIGFEVGTFSSGAGA---LGTLLLLSLTTLSPSDVVGTD 194

Query: 200 AGVSALIAFPALLVRIYSGWGLNGL 224
                +++     + ++ G     +
Sbjct: 195 IAFGLILSIIGGGIHLFQGLSDTNI 219


>gi|170719260|ref|YP_001746948.1| hypothetical protein PputW619_0073 [Pseudomonas putida W619]
 gi|169757263|gb|ACA70579.1| protein of unknown function DUF81 [Pseudomonas putida W619]
          Length = 272

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 42/120 (35%), Gaps = 13/120 (10%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
              G + G +    G GGGI    L++F  G S+ +A    A +  L    A  V    G
Sbjct: 9   AGLGAIIGAVLALTGAGGGILAVPLLVFGLGLSMVEA----APIGLLAVGLAAAVGAILG 64

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                      G V   A L I  I I   P    L++ +    L + F+ ++       
Sbjct: 65  LRQ--------GLVRYRAALFIALIGIAAAPFGLMLAHRLPDTPLALVFAGVLVYACLRM 116



 Score = 40.4 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 48/126 (38%), Gaps = 7/126 (5%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++++  L      + G +  L G GGG++ VP+L     L  ++ +    +A+G +  V 
Sbjct: 1   MIEHQLLGAGLGAIIGAVLALTGAGGGILAVPLLVFGLGLSMVEAAPIGLLAVGLAAAVG 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           A   +       R G +  +       +         ++   +  + L   FA   +   
Sbjct: 61  AILGL-------RQGLVRYRAALFIALIGIAAAPFGLMLAHRLPDTPLALVFAGVLVYAC 113

Query: 139 ILMLKR 144
           + M ++
Sbjct: 114 LRMWRK 119



 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 31/80 (38%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +    ++ M   + TSL VIA  S  S +     G ++ ++   +     +  +
Sbjct: 177 FVIIPALNRYTNLRMKSIVSTSLAVIALVSTGSVVSASLAGVMHWQVGAPFAVGAVLGLL 236

Query: 113 VTSLMISHVDKSFLNKAFAI 132
           +   + + +    L + F++
Sbjct: 237 LARPLAARLAGPRLQQLFSV 256


>gi|49474519|ref|YP_032561.1| hypothetical protein BQ09650 [Bartonella quintana str. Toulouse]
 gi|49240023|emb|CAF26441.1| hypothetical protein BQ09650 [Bartonella quintana str. Toulouse]
          Length = 306

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 105/307 (34%), Gaps = 56/307 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + ++I    + G  SGLFG+GGG ++ P+L           +I   +
Sbjct: 1   MSIYLPIAEISLNMLILIGMGVVGGFFSGLFGIGGGFLITPLLIFY--------NIPPAI 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+GT    +  +SV   + H R  T+++K+         I ++V   + S + K      
Sbjct: 53  AVGTGANQMIASSVTGAITHFRRRTLDIKLGILLAIGGGIGSLVGIQIFSVLKKLGQLDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            ++  + I    +G LM+                                + R      +
Sbjct: 113 MISLLYVILLGSVGSLMIIESWREMLRQRKAQKVNICLAGRHNWIHRLPLKMRFRTSMIY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G++ G LS  +G+GGG F    +++           TS      ++    +
Sbjct: 173 VSIIPVLGIGLIVGLLSSIMGIGGGFFMIPALIYLLRVPTSVVIGTSLFQITFVSSFTTI 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           ++  S              V+I    +++    +     T     +  + L +  + ++ 
Sbjct: 233 LQSVSNQS-----------VDIVLAFLLMLGGSIGAQYGTSAGRKLKAEQLRMALACLVL 281

Query: 273 TTSFVFA 279
                 A
Sbjct: 282 IVCMRLA 288


>gi|299538133|ref|ZP_07051418.1| hypothetical protein BFZC1_19040 [Lysinibacillus fusiformis ZC1]
 gi|298726335|gb|EFI66925.1| hypothetical protein BFZC1_19040 [Lysinibacillus fusiformis ZC1]
          Length = 264

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 79/232 (34%), Gaps = 22/232 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +    ++    ++  +  + G GGGL+ +P +            I +  ++ T+      
Sbjct: 22  NISLTLVCIGMVAAFIGTIAG-GGGLITLPAMMLV--------GIPIQTSIATNKFSTGI 72

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +S+ S         +++  +  +I +  +  +  SL+   + +  +N    +  LL  ++
Sbjct: 73  SSLSSIFYLLYQKELHLTSIIKYIALAIVGGICGSLLAVSLSEQTMNYMACVLLLLALVI 132

Query: 141 MLKRDRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            LK           ++   + W         G  G G   F+ L  L    +  KA   +
Sbjct: 133 TLKNKAWTEVPNSLEHQAPHFWQPFFIAMYDGGFGPGSSTFSILHYLRTHHTYIKAVQLT 192

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
             +       A +V             +  GF+     + +   SI+ + L 
Sbjct: 193 RVLLFGSCTGAFIVF------------YHTGFIQWHYAIAMALGSIIGSQLG 232


>gi|331018532|gb|EGH98588.1| hypothetical protein PLA106_21063 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 272

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 15/119 (12%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
           + +    G++ G +    G GGGI    L++F             G+   I   A +  +
Sbjct: 5   SLLGAGLGVIIGAVLALTGAGGGILAVPLLVF-------------GLGLTIVEAAPVGLL 51

Query: 216 YSGWGLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             G          L  G V   A   I  I +L+ P+   L++ +    L + FS ++ 
Sbjct: 52  AVGLAAWVGAVLGLRQGIVRYRAAGYIAGIGVLMAPIGLWLAHRLPNTPLALIFSAVLL 110



 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 38/98 (38%), Gaps = 7/98 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V++P L++          + M   + TSL VIA  S  S +     G ++  +   +  
Sbjct: 177 FVIIPALTRY-------SDLDMKSVVATSLAVIALVSTGSVIIASLSGVMHWAVGAPFAL 229

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                 +    +  ++    L + FA+  +   ++++ 
Sbjct: 230 GAVAGLLGGRQVARYLAGPRLQQLFAVCGIAAALMLVF 267



 Score = 40.8 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 85/239 (35%), Gaps = 32/239 (13%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++D+  L      + G +  L G GGG++ VP+L     L  ++ +    +A+G +  V 
Sbjct: 1   MIDHSLLGAGLGVIIGAVLALTGAGGGILAVPLLVFGLGLTIVEAAPVGLLAVGLAAWVG 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           A   +       R G +  +       +  +   +   +   +  + L   F+   L   
Sbjct: 61  AVLGL-------RQGIVRYRAAGYIAGIGVLMAPIGLWLAHRLPNTPLALIFSAVLLYAC 113

Query: 139 ILMLKRD-----------------------RLYCERKFPDNYVKYIWGMVTGFLSGALGV 175
             +  R                        +       P        GM +G LSG LGV
Sbjct: 114 GRIFIRASRELRDGRQAPRAQMLPCVLNPLQGRLRWTMPCLRALTFTGMCSGLLSGLLGV 173

Query: 176 GGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSG-WGLNGLPPWSLGFV 232
           GGG      +  Y    +    ATS  V AL++  ++++   SG        P++LG V
Sbjct: 174 GGGFVIIPALTRYSDLDMKSVVATSLAVIALVSTGSVIIASLSGVMHWAVGAPFALGAV 232


>gi|319638962|ref|ZP_07993720.1| hypothetical protein HMPREF0604_01344 [Neisseria mucosa C102]
 gi|317399866|gb|EFV80529.1| hypothetical protein HMPREF0604_01344 [Neisseria mucosa C102]
          Length = 266

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 79/218 (36%), Gaps = 15/218 (6%)

Query: 7   NFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
              +   +  D     + L++ AS ++G +  + G G GL+++P              + 
Sbjct: 3   QLFIPGSIIADYFYLGLFLLVAASLIAGYVDAIAG-GAGLILIPAFLMV--------GLP 53

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
             VA+     V    +V +     +  +I   I+   I    I   V + +I  +    +
Sbjct: 54  PQVALAQEKLVSTIGTVAAIKNFMKSSSIVWHIVPVGIVAALIGAFVGAKVILILPVETI 113

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM-----VTGFLSGALGVG-GGIF 180
           N     F  +  +  L +  L  +        K +  +     + GF  G  G G G IF
Sbjct: 114 NYIILAFLPIGLLATLFKGVLLKKEDERGEIKKSVIAVFLTCLIVGFYDGFFGPGTGSIF 173

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
              L +    S+ +A+ATS   +      A +  + +G
Sbjct: 174 IIALFVINKLSLLQASATSKIFNFASNIGAFVAFLIAG 211


>gi|284005872|ref|YP_003391691.1| hypothetical protein Slin_6948 [Spirosoma linguale DSM 74]
 gi|283821056|gb|ADB42892.1| conserved hypothetical protein [Spirosoma linguale DSM 74]
          Length = 122

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 37/97 (38%), Gaps = 8/97 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWIFVL 107
           VP L   F    I        A GT+L  + P   +++   + R G I++          
Sbjct: 30  VPALVLLFGFSQI-------TAQGTALATLIPPVGLLAAYAYYREGAIDLHAAIWIAAGF 82

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            I   + + + + +  + L K FA+  + + + +   
Sbjct: 83  LIGGFLGAKIATAIPVNLLTKGFALLLVFIAVKLWFG 119


>gi|152982049|ref|YP_001355330.1| hypothetical protein mma_3640 [Janthinobacterium sp. Marseille]
 gi|151282126|gb|ABR90536.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 253

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 79/234 (33%), Gaps = 24/234 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +P L  AF       +  M   +GT+       +  + +   R   +       
Sbjct: 23  GGGLIQIPALFSAF------PNASMGTLLGTNKLASVCGTSAAAVGFARKVKLQWSTAAP 76

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF-----PDNY 157
                     + +  ++ +   F+ K      + + I   K+               + +
Sbjct: 77  AAMAAFAFAFLGAFTVTQIPSEFMRKLLPFILVAVAIYTYKKKDFGSIHAPMHIGAKEKW 136

Query: 158 VKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           +  + G   GF  G  G G G     L + F+G     A+A +  V+      A+L   +
Sbjct: 137 IAILVGAGIGFYDGFFGPGTGSFLVFLFVRFFGFDFLGASAVAKIVNVACNIAAIL---W 193

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            G+    L              ++   ++L + L  +L+   G  ++   F ++
Sbjct: 194 FGYSAELL---------WKLAAVMAVCNVLGSLLGIRLAIRHGSGFVRKIFLVV 238


>gi|325919732|ref|ZP_08181732.1| putative permease [Xanthomonas gardneri ATCC 19865]
 gi|325549790|gb|EGD20644.1| putative permease [Xanthomonas gardneri ATCC 19865]
          Length = 285

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 73/212 (34%), Gaps = 13/212 (6%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            +  + +   +  ++  +F++G +    G GGGL+ +P L                + +G
Sbjct: 27  AVLLELIPTELPWLLCIAFVAGLVDAAVG-GGGLIQLPGLFATLPQQ------APSLILG 79

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           T+       +  S   + R+     + +          + + +  +S + K  +     +
Sbjct: 80  TNKFSAMFGTGASAWRYARNVRFPWRPVLYATVAAFTFSFMGATAVSLLPKQAVRPLILL 139

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVG-GGIFTNLLML 186
             + M I  L +       +      +        G   GF  G  G G G     L + 
Sbjct: 140 LLIAMLIYTLIKKDFGALHRPRAIGRRELITALAMGAAIGFYDGFFGPGTGSFLIFLFIR 199

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           F+G    +A+A +  V+      AL   + SG
Sbjct: 200 FFGLDFLRASAAAKVVNLATNLAALSFFLPSG 231


>gi|11499278|ref|NP_070516.1| hypothetical protein AF1688 [Archaeoglobus fulgidus DSM 4304]
 gi|2648867|gb|AAB89561.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 274

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 65/225 (28%), Gaps = 30/225 (13%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +   L  +A+F+ G +    GV G  +++P              +   +A  T+L     
Sbjct: 3   EIPLLPFIAAFIIGLICSPAGVTGAFLLLPFQLSVL-------GVTSPIANSTNLLYNIL 55

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF--LNKAFAIFCLLMG 138
           +         R     + +    +        + +L+  H+           A   L +G
Sbjct: 56  SIPGGAYNFWREKRFLLPLAIALVLGYLPGMYLGTLVRIHLLGDVRAFKAFVAAVLLYLG 115

Query: 139 ILMLKRDRLYCERKFP--------------------DNYVKYIWGMVTGFLSGALGVGGG 178
           I ++       E +                      +     +     G ++ A GVGGG
Sbjct: 116 IRLILSKSQRIEGEMKILKSSSLKVEFSFANSIFTFNPLAIALTSFTIGIVASAYGVGGG 175

Query: 179 IFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
                +++  Y   I      +   +   +   L      G+  N
Sbjct: 176 ALMAPILVSLYSLPIKAIAGANLVGTFAASVFGLASYTALGYPPN 220


>gi|325266513|ref|ZP_08133190.1| hypothetical protein HMPREF9098_0917 [Kingella denitrificans ATCC
           33394]
 gi|324981956|gb|EGC17591.1| hypothetical protein HMPREF9098_0917 [Kingella denitrificans ATCC
           33394]
          Length = 251

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 88/260 (33%), Gaps = 28/260 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I++   L+G ++ + G GG  +++PVL     + GI       +A G++   I   ++
Sbjct: 9   LAIVLLGTLAGIINIMAG-GGSNLILPVLM----MFGIPPD----IANGSNRVGIFLQTI 59

Query: 84  MSFMEHRRHGTINMKILKDWIF-VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                  + G I  +     +     +  +  ++  S +    L     +  L +  ++L
Sbjct: 60  TGIRGFAKAGKIPPRRQWQAVLVPTLLGGIAGAVAASVLPNWILKPTLLLSMLTVATIVL 119

Query: 143 KRDRLY----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
            + RL+         P     +I     G   G +  G G+    +     G  + ++ A
Sbjct: 120 VKPRLFEVQAASIPQPLRPHSWILLFFIGIYGGFVQAGVGLLMLPVFAGLLGYDMIRSNA 179

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
                +      A L+ I                +  G  + +   + L   +  +L+  
Sbjct: 180 LKLLCTMGFTTAAFLIFIVQRQ------------IWWGVGIALAAGNTLGAMIGVRLALK 227

Query: 258 IGKKYLT-IGFSMIMFTTSF 276
           +  + +  + F M +     
Sbjct: 228 LPVRTVRWLIFVMTLVAVML 247


>gi|315441660|ref|YP_004074537.1| permease [Mycobacterium sp. Spyr1]
 gi|315265315|gb|ADU02056.1| predicted permease [Mycobacterium sp. Spyr1]
          Length = 272

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 7/97 (7%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           ++P L     +        M VA+GTSL +I   S    + H    +I+  I   ++   
Sbjct: 178 IIPALVLLLGVQ-------MSVAIGTSLLIIVANSAAGALFHLDGASIDWSITAAFVATA 230

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              ++V     + +D   L   FA     +   +L  
Sbjct: 231 IGGSLVAGHYGARLDTGRLQHWFAYLVFAVAAYVLLD 267



 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 79/248 (31%), Gaps = 41/248 (16%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP L  A  L G++ +I M      SL V+A  S +  +   R G +  ++   +  
Sbjct: 41  ILAVPALVYALGL-GVEQAIPM------SLIVVAVASAVGVLPRLRAGQVQWRLAAVFAV 93

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML----------------KRDRLYC 149
                 ++ S +   + +  L   FAI  +  G+ ML                   R   
Sbjct: 94  AGIPAALLGSAIGERLPQRVLMIGFAILMIGAGLRMLTDSTDAGTACTVGDGGINWRRCA 153

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
            R  P  +   +   + G   G       +    L+L  G  +  A  TS  +    +  
Sbjct: 154 PRSIPAGFAVGLLTGLFGVGGGF------VIIPALVLLLGVQMSVAIGTSLLIIVANSAA 207

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
             L  +                ++       +  +I  + +A      +    L   F+ 
Sbjct: 208 GALFHLDGAS------------IDWSITAAFVATAIGGSLVAGHYGARLDTGRLQHWFAY 255

Query: 270 IMFTTSFV 277
           ++F  +  
Sbjct: 256 LVFAVAAY 263


>gi|299066508|emb|CBJ37698.1| conserved membrane protein of unknown function, DUF81 [Ralstonia
           solanacearum CMR15]
          Length = 273

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 77/270 (28%), Gaps = 42/270 (15%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             + G +  L G GG +V VP+L     L     +    +A+G S G+ +   +      
Sbjct: 15  GSVVGLILALTGAGGAIVAVPLLIFGLHLSVSQAAPVALLAVGLSAGLGSVLGL------ 68

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR--- 146
            R G +  K            + +       V  + L   FA+    + I M  + R   
Sbjct: 69  -REGKVRYKAAALMALCGVALSPLGVWAAHRVPNTPLTLLFAVVLAHVAIRMFLQARATA 127

Query: 147 ---LYCERKFPDNYVKYIWGMVTGFLS---GALGVGGGI--------------FTNLLML 186
                     P  ++  + G +   L        +G                     L  
Sbjct: 128 PAAPSPRHAAPPCHLDTVRGKLIWTLPCARTLASLGAAAGFLSGLLGVGGGFVIVPALRR 187

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
                +    ATS  V AL++   +L                 G V+    L     ++ 
Sbjct: 188 ATDLPMQTIVATSLAVIALVSAGGVLASAIG------------GHVDWHIALPFAAGALA 235

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                   S+ +    L  GF+     T+ 
Sbjct: 236 GMLTGRGFSHHLAGPALQQGFAAFAGVTAI 265



 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 29/81 (35%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + M   + TSL VIA  S    +     G ++  I   +        +       H+  
Sbjct: 190 DLPMQTIVATSLAVIALVSAGGVLASAIGGHVDWHIALPFAAGALAGMLTGRGFSHHLAG 249

Query: 124 SFLNKAFAIFCLLMGILMLKR 144
             L + FA F  +  I ++ R
Sbjct: 250 PALQQGFAAFAGVTAIGLVVR 270



 Score = 40.8 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 46/124 (37%), Gaps = 11/124 (8%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
                   G V G +    G GG I    L++F    ++ + + +A V+ L    +  + 
Sbjct: 7   GWLASAGLGSVVGLILALTGAGGAIVAVPLLIF---GLHLSVSQAAPVALLAVGLSAGLG 63

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
              G           G V   A  ++    + ++PL    ++ +    LT+ F++++   
Sbjct: 64  SVLGLRE--------GKVRYKAAALMALCGVALSPLGVWAAHRVPNTPLTLLFAVVLAHV 115

Query: 275 SFVF 278
           +   
Sbjct: 116 AIRM 119


>gi|150389999|ref|YP_001320048.1| hypothetical protein Amet_2231 [Alkaliphilus metalliredigens QYMF]
 gi|149949861|gb|ABR48389.1| conserved hypothetical protein [Alkaliphilus metalliredigens QYMF]
          Length = 122

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%)

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
           G +L +  P +V++   H R+G + +      +      T++ S +   +    L K F 
Sbjct: 41  GVNLLMFIPVAVIAVFIHYRNGNVLLNFTIPLVSFGIFGTIIGSKIALVLPSDTLRKLFG 100

Query: 132 IFCLLMGIL 140
           IF L+MG+ 
Sbjct: 101 IFLLIMGVY 109


>gi|23098446|ref|NP_691912.1| hypothetical protein OB0991 [Oceanobacillus iheyensis HTE831]
 gi|22776672|dbj|BAC12947.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 248

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 15/188 (7%)

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
                +  K L + I  + +  +    ++ +V+   L     +  L+M  L + R+RL  
Sbjct: 64  YYRRNVVWKYLTNLIPWVLMGILAGFFVLQYVNDEQLKPIIGVIVLIMIALNVVRERLGS 123

Query: 150 E--RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
           +     P +    I   V G  +  +G   G    + +L  G    +   T A     + 
Sbjct: 124 KFNEMLPTSLTFTILMGVLGGFTTMVGNAAGAIMTIYLLVKGLPKKEFVGTGAWFFLSVN 183

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
                  +Y G        ++L          + P+ IL   +  K+  +I        F
Sbjct: 184 VIKFPFYMYLGLITTESLTFNL---------TMAPVIILGAIIGVKVLPLIP----QHVF 230

Query: 268 SMIMFTTS 275
           +M++   +
Sbjct: 231 TMLILVLA 238


>gi|209521946|ref|ZP_03270613.1| protein of unknown function DUF81 [Burkholderia sp. H160]
 gi|209497624|gb|EDZ97812.1| protein of unknown function DUF81 [Burkholderia sp. H160]
          Length = 262

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 84/270 (31%), Gaps = 35/270 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L   +    G L GL GVGGG +M P+L   F       ++    A+GT L   A T  
Sbjct: 8   LLYSASGLFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAIFCLLM 137
              + H   G+++ ++             +T +++             +        L+ 
Sbjct: 61  TGTLLHGLKGSVDWQVTLRLAAGSVPAATITLILLHRFGMDTPGASRLIQVVLGAALLIT 120

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY- 188
            I ++ R         +     +     +  + G + G L     VG G     ++L   
Sbjct: 121 AIALVFRPQLAALGARKQRTPSQARTLALTMLTGAILGVLVSLTSVGAGAIGVTVLLLLY 180

Query: 189 -GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                 +   +    +  +              L G   W LG ++   +L +L  S+  
Sbjct: 181 PMLPTTRIVGSDIAHAVPLTL------------LAGAGHWLLGTIDWSMLLSLLVGSLPG 228

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             + + LS       L    +  +      
Sbjct: 229 IAIGSYLSSRAPDALLRNLLAATLTLVGVR 258



 Score = 40.4 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 6/122 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L ++   + G L  L  VG G + V VL   + ++     +   +A         P +
Sbjct: 147 LALTMLTGAILGVLVSLTSVGAGAIGVTVLLLLYPMLPTTRIVGSDIAHA------VPLT 200

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++   H   GTI+  +L   +        + S + S    + L    A    L+G+ ++
Sbjct: 201 LLAGAGHWLLGTIDWSMLLSLLVGSLPGIAIGSYLSSRAPDALLRNLLAATLTLVGVRLV 260

Query: 143 KR 144
             
Sbjct: 261 LS 262


>gi|28867348|ref|NP_789967.1| hypothetical protein PSPTO_0108 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28850582|gb|AAO53662.1| membrane protein, putative [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 272

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 15/119 (12%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
           + +    G++ G +    G GGGI    L++F             G+   I   A +  +
Sbjct: 5   SLLGAGLGVIIGAVLALTGAGGGILAVPLLVF-------------GLGLTIIEAAPVGLL 51

Query: 216 YSGWGLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             G          L  G V   A   I  I +L+ P+   L++ +    L + FS ++ 
Sbjct: 52  AVGLAAGVGAVLGLRQGIVRYRAAGYIAGIGVLMAPIGLWLAHRLPNTPLALIFSAVLL 110



 Score = 42.0 bits (98), Expect = 0.085,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 88/239 (36%), Gaps = 32/239 (13%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++D+  L      + G +  L G GGG++ VP+L     L  I+ +    +A+G + GV 
Sbjct: 1   MIDHSLLGAGLGVIIGAVLALTGAGGGILAVPLLVFGLGLTIIEAAPVGLLAVGLAAGVG 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           A   +       R G +  +       +  +   +   +   +  + L   F+   L   
Sbjct: 61  AVLGL-------RQGIVRYRAAGYIAGIGVLMAPIGLWLAHRLPNTPLALIFSAVLLYAC 113

Query: 139 ILMLKRD-----------------------RLYCERKFPDNYVKYIWGMVTGFLSGALGV 175
             +  R                        +       P      + GM +G LSG LGV
Sbjct: 114 GRIFIRASRELRDGRQAPRAQMLPCVLNPLQGRLRWTMPCLRALTLTGMCSGLLSGLLGV 173

Query: 176 GGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSG-WGLNGLPPWSLGFV 232
           GGG      +  Y   ++    ATS  V AL++  ++++   SG        P++LG V
Sbjct: 174 GGGFVIIPALTRYSDLNMKSVVATSLAVIALVSTGSVIIASLSGVMHWAVGAPFALGAV 232



 Score = 40.8 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 38/98 (38%), Gaps = 7/98 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V++P L++          + M   + TSL VIA  S  S +     G ++  +   +  
Sbjct: 177 FVIIPALTRY-------SDLNMKSVVATSLAVIALVSTGSVIIASLSGVMHWAVGAPFAL 229

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                 +    +  ++    L + FA+  +   ++++ 
Sbjct: 230 GAVAGLLGGRQVARYLAGPRLQQLFAVCGIAAALMLVF 267


>gi|294629217|ref|ZP_06707777.1| integral membrane protein [Streptomyces sp. e14]
 gi|292832550|gb|EFF90899.1| integral membrane protein [Streptomyces sp. e14]
          Length = 260

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 53/162 (32%), Gaps = 7/162 (4%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           S     A+GT+  V    +  + + + R   ++++            +   +   + +  
Sbjct: 44  STPAAAALGTNKAVAIVGTTGAAVTYVRRAPVDVRTAVRIGLAALAGSCAGAFFAAGMST 103

Query: 124 SFLNKAFAIFCLLMGILMLKRDR------LYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
             L        L +G  ++ R             +        + G+  GF  G +G G 
Sbjct: 104 DVLKPVIMAVLLAVGAFVILRPSFGTAPAPGPVSRRRVLAAIGLAGLGIGFYDGFIGPGT 163

Query: 178 GIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
           G F  L +       +  A+AT+  V+      AL    + G
Sbjct: 164 GTFLVLALTAVLHLDLVTASATAKIVNCCTNAGALATFAWQG 205


>gi|160875419|ref|YP_001554735.1| hypothetical protein Sbal195_2307 [Shewanella baltica OS195]
 gi|160860941|gb|ABX49475.1| protein of unknown function DUF81 [Shewanella baltica OS195]
 gi|315267609|gb|ADT94462.1| protein of unknown function DUF81 [Shewanella baltica OS678]
          Length = 252

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 79/261 (30%), Gaps = 35/261 (13%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D   L+ +++  +   +  FG+GGG++++ V+++      I             L  +  
Sbjct: 14  DIFALLTLSAAFTSFFTACFGIGGGVMLLGVMAQVLPPQLIIP-----------LHGVVQ 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                         I  +++  +     +  ++ SL++  +  S +    A F       
Sbjct: 63  LGSNGGRAALGWRHIEWRLIAAFFPGAILGALLGSLVLVALPPSVMYLTIAAFIFYSCW- 121

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG----GIFTNLLMLFYGASIYKAT 196
                     +           G +T F+S   G  G         L +  +      A 
Sbjct: 122 -----GPKLPKMVFGTLGTLAAGAITTFISLFAGATGPLVAAFIKQLEVDRFRTVATFAL 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A S      I     +    + W                 ++ ++    + T +  K+  
Sbjct: 177 AMSLQHGVKIVVYEGMGVTLADW--------------WPLLVCMILSGTVGTWIGFKMLK 222

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            +  K+    FS+++   +  
Sbjct: 223 RVADKHFQTAFSIVLTLLAIR 243


>gi|307596179|ref|YP_003902496.1| hypothetical protein Vdis_2075 [Vulcanisaeta distributa DSM 14429]
 gi|307551380|gb|ADN51445.1| protein of unknown function DUF81 [Vulcanisaeta distributa DSM
           14429]
          Length = 313

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 93/283 (32%), Gaps = 58/283 (20%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G ++ L GVGGG++  P++        I+  I       T L +   +S+MS   +   G
Sbjct: 37  GFVAALAGVGGGVLFTPIMMA---FTTINPDIVR----ATGLAIATMSSLMSARPYLGKG 89

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDK-------SFLNKAFAIFCLLMGILMLKRDR 146
             N  +         I  ++ SL+  H+         + +  A  +  L + ILM+ + R
Sbjct: 90  IANFNLALFSSLPYTIFAIIGSLIGLHITAVMGNFGKALIRLALGVLVLFIVILMITKGR 149

Query: 147 LYCERKFP-------------------------------DNYVKYIWGMVTGFLSGALGV 175
                  P                               +     +  M  G +SG  G+
Sbjct: 150 RTEYPIPPEDKYDKLANAFELNSSYYEISLGRTVEYRVINTMWGLLCFMGIGLVSGMFGL 209

Query: 176 GGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           G G     +  L     +  ATATS  V  +    A+ V I +G  +            I
Sbjct: 210 GAGWAIVPVYNLLMYVPLKVATATSLVVIGIGDTAAMWVYINNGAMIPIFV--------I 261

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             +L      ++   + ++L   +  K +     + M   S  
Sbjct: 262 PCLLG----CMIGAQIGSRLMPKLRAKVIRWFVILAMLLASAR 300



 Score = 42.0 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G +SG+FG+G G  +VPV +           + + VA  TSL VI      +   +  +G
Sbjct: 201 GLVSGMFGLGAGWAIVPVYNLLMY-------VPLKVATATSLVVIGIGDTAAMWVYINNG 253

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            +    +   +    I   + S ++  +    +     +  LL    ++++   
Sbjct: 254 AMIPIFVIPCLLGCMIGAQIGSRLMPKLRAKVIRWFVILAMLLASARLIQQALP 307


>gi|302538076|ref|ZP_07290418.1| predicted protein [Streptomyces sp. C]
 gi|302446971|gb|EFL18787.1| predicted protein [Streptomyces sp. C]
          Length = 271

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 58/195 (29%), Gaps = 7/195 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++  A    G L G+ G+GG    +P+L   F    +   I       + + V+      
Sbjct: 18  VVFAAGAAIGVLGGMIGLGGAEFRLPLLIGLFGFAALSAVILNKAM--SLVVVLVALPAR 75

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                         +  + +    +     +     +  + L K  +   +LM   +   
Sbjct: 76  LAAVPAAEVAARWPVAANLLAGSLLGAWAGASWAVRMRSATLYKVLSALMVLMAAALFLT 135

Query: 145 DRLYCERKFPDNYVK----YIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATS 199
                       + +       G   G ++  +GV GG      + L +G  I  A + S
Sbjct: 136 HTTTLGTLDLPQWARIPAGIAAGFGIGVVAAIMGVAGGELLIPTIALLFGEDIKTAGSLS 195

Query: 200 AGVSALIAFPALLVR 214
             VS      A    
Sbjct: 196 LLVSLPTMLVAFARY 210


>gi|329727892|gb|EGG64342.1| hypothetical protein SEVCU144_0935 [Staphylococcus epidermidis
           VCU144]
          Length = 125

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 59/126 (46%), Gaps = 9/126 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + +I+   F++  +  + G GGGL+  P L            +   VA+GT+    +
Sbjct: 5   LSIMLMIVAFGFIASFVDSVVG-GGGLISTPALLAV--------GLPPSVALGTNKFASS 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +++ S ++  R G +++KI+   + ++ + +   +++ +++  + L     I   L+ I
Sbjct: 56  FSTLTSALKFLRSGKVDLKIVGKMLPLIFVASGGAAIIATYIPANILKPLIIIALSLVLI 115

Query: 140 LMLKRD 145
             + + 
Sbjct: 116 YTVIQK 121


>gi|282861782|ref|ZP_06270846.1| protein of unknown function DUF81 [Streptomyces sp. ACTE]
 gi|282563598|gb|EFB69136.1| protein of unknown function DUF81 [Streptomyces sp. ACTE]
          Length = 263

 Score = 45.8 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 48/159 (30%), Gaps = 11/159 (6%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+  V    +  + + + R   + +             ++  +   + +    L    
Sbjct: 50  LGTNKAVAIVGTTGAAVTYVRRAPVQVGTAVRIGLTALAGSMTGAFFAAGLSSDVLRPVI 109

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDN----------YVKYIWGMVTGFLSGALGVGGGIF 180
            +  L +   +L R                          + G   GF  G  G G G F
Sbjct: 110 MVVLLGVAAFVLARPSFGTAAADDGTDRKVTRARLVTAIVLVGGGIGFYDGLFGPGTGTF 169

Query: 181 TNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
             L +       +  A+AT+  V+      AL +  Y G
Sbjct: 170 LVLALTAVLHLDLVTASATAKIVNVCTNAGALAMFAYQG 208


>gi|258512599|ref|YP_003186033.1| hypothetical protein Aaci_2640 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479325|gb|ACV59644.1| protein of unknown function DUF81 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 266

 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 86/264 (32%), Gaps = 24/264 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L I    + G   GL G GG ++ VP+L     +         H+ +GT+   +A  +
Sbjct: 9   IVLAIACGGVVGFTLGLIGGGGSILAVPLLLYVVGI------HNAHIVIGTTALAVAVNA 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++ + H RHG +  K    +     I  VV S+    +D   L   FA+  L++ +  L
Sbjct: 63  WINLIPHWRHGHVRWKPAILFAIPGAIGAVVGSIFGKMLDGKALLFLFALLILVIAVRTL 122

Query: 143 K-----RDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
                   +              V    G            GG +    LM   G  +  
Sbjct: 123 IQARRGNGKPAAADPMGSFRWGRVLATGGGTGLLSGFFGIGGGFLIVPGLMFATGMEMID 182

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A  +S     L      +    SG             V +  VL  +      T +++KL
Sbjct: 183 AIGSSLVSVGLFGVTTAVSYAASGLVAWN--------VFLLYVLGGIAGGFFGTLVSSKL 234

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
                K  L   F  I+   +   
Sbjct: 235 GNR--KSLLQTIFGSILVLVALYM 256



 Score = 38.9 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 35/94 (37%), Gaps = 2/94 (2%)

Query: 54  KAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV 113
                +     + M  A+G+SL  +    V + + +   G +   +   ++         
Sbjct: 167 LIVPGLMFATGMEMIDAIGSSLVSVGLFGVTTAVSYAASGLVAWNVFLLYVLGGIAGGFF 226

Query: 114 TSLMISHV--DKSFLNKAFAIFCLLMGILMLKRD 145
            +L+ S +   KS L   F    +L+ + ML  +
Sbjct: 227 GTLVSSKLGNRKSLLQTIFGSILVLVALYMLYDN 260


>gi|90655529|gb|ABD96368.1| unknown [uncultured marine type-A Synechococcus GOM 3O12]
          Length = 257

 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 61/172 (35%), Gaps = 5/172 (2%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
           F  + +   +  H A+ TS   I PT++   + H R G++ ++           + ++  
Sbjct: 32  FAPLLLWLDLPPHQALATSSFAIVPTALAGLVSHLRSGSLPVRTGVAIGASAFCSALLFG 91

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALG- 174
            +   V    L     +  +++   +  R+      +  +   +       G ++G    
Sbjct: 92  GLAGVVSGWLLLVMQTLIYVVLAFAVRVREDEETAGEDEETNAQVGLLAGVGCIAGWTAG 151

Query: 175 ----VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
                GG +   L+    G  I++A   S       A  A L  ++ G G+ 
Sbjct: 152 MLGLGGGLVMVPLMNGPLGVPIHRAVRLSTVAVFCSASAASLQFLHEGRGVP 203


>gi|319954259|ref|YP_004165526.1| hypothetical protein Celal_2746 [Cellulophaga algicola DSM 14237]
 gi|319422919|gb|ADV50028.1| protein of unknown function DUF81 [Cellulophaga algicola DSM 14237]
          Length = 258

 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 74/210 (35%), Gaps = 18/210 (8%)

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +L         S   + +HG   +K    ++        + +     +++        + 
Sbjct: 51  ALICNLVVVSGSTYLYFKHGHAKIKEFIPFVIASIPLAFIGASF--KLNERVFFIVLGVS 108

Query: 134 CLLMGI----LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            +L  +        + +   E K    Y  Y+ G   GFLSG +G+GGGIF   ++  + 
Sbjct: 109 LVLSALALAGQTFTKKKEAKEVKEYPKYFSYVMGGTIGFLSGLVGIGGGIFLAPVLNHFK 168

Query: 190 ASIY-KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
            +   K  A ++    + +F  LL  + SG     LP            L++     L  
Sbjct: 169 WNSALKIAALASFFILVNSFSGLLGLLNSG--TIALP--------WKETLLLAIAVFLGG 218

Query: 249 PLATKLS-YMIGKKYLTIGFSMIMFTTSFV 277
            L  +LS   +    +    S+++F     
Sbjct: 219 QLGIRLSLKKLTPNNIKRLTSLLVFIVGIR 248


>gi|241767810|ref|ZP_04765401.1| protein of unknown function DUF81 [Acidovorax delafieldii 2AN]
 gi|241361130|gb|EER57794.1| protein of unknown function DUF81 [Acidovorax delafieldii 2AN]
          Length = 197

 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 7/97 (7%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           + I A F  G + GL GVGGG +M PVL   F        +  H+A+GT L   A T + 
Sbjct: 5   MFIFAGFAVGLIVGLTGVGGGSLMTPVLIFFF-------GVKPHLAIGTDLLFAAFTKLG 57

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV 121
                 R   +  +++           +    ++  +
Sbjct: 58  GTASMARQRLVPWRVVGLLCAGSIPAALSALWLLHRM 94



 Score = 35.4 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 1/57 (1%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRI 215
              G   G + G  GVGGG     +++ F+G   + A  T    +A           
Sbjct: 7   IFAGFAVGLIVGLTGVGGGSLMTPVLIFFFGVKPHLAIGTDLLFAAFTKLGGTASMA 63


>gi|126441064|ref|YP_001060155.1| hypothetical protein BURPS668_3143 [Burkholderia pseudomallei 668]
 gi|126220557|gb|ABN84063.1| putative membrane protein [Burkholderia pseudomallei 668]
          Length = 262

 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 56/269 (20%), Positives = 88/269 (32%), Gaps = 33/269 (12%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L  ++    G L GL GVGGG +M P+L   F       ++    A+GT L   A T   
Sbjct: 7   LYSLSGLFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAALTKAT 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI------SHVDKSFLNKAFAIFCLL-- 136
               H   GT+  +I             +T   +      S      +        LL  
Sbjct: 60  GTFVHGLKGTVEWRITGRLAAGSVPAAAITLWFLHAHGMHSQETSRMIQFVLGAALLLTS 119

Query: 137 --------MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
                   +     KR R              + G V G L     VG G     ++L  
Sbjct: 120 LSLLLRPQLAAFAAKRTRALPPNPTRTLAATVLTGAVLGVLVSLTSVGAGAIGVTVLLL- 178

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
              +Y A +T+  V + IA    L        + G+  W LG V+   ++ +L  S+   
Sbjct: 179 ---LYPALSTTRIVGSDIAHAVPLTL------VAGVGHWMLGSVDWAMLVSLLIGSVPGI 229

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + + LS    +  L    +  +      
Sbjct: 230 VIGSHLSARAPEGLLRRVLAATLVAVGAK 258



 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 48/118 (40%), Gaps = 6/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  L  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 151 VLTGAVLGVLVSLTSVGAGAIGVTVLLLLY------PALSTTRIVGSDIAHAVPLTLVAG 204

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + H   G+++  +L   +       V+ S + +   +  L +  A   + +G  ++  
Sbjct: 205 VGHWMLGSVDWAMLVSLLIGSVPGIVIGSHLSARAPEGLLRRVLAATLVAVGAKLVLS 262


>gi|316935142|ref|YP_004110124.1| hypothetical protein Rpdx1_3826 [Rhodopseudomonas palustris DX-1]
 gi|315602856|gb|ADU45391.1| protein of unknown function DUF81 [Rhodopseudomonas palustris DX-1]
          Length = 247

 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 93/260 (35%), Gaps = 29/260 (11%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++I  +   G +SGL G G  LV     S  F L     ++ + + +  S+   A
Sbjct: 3   LTTLIVLIAGALCGGFVSGLSGFGMALV-----SLGFWLYVFPPTLSVPLVLLCSMASQA 57

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T +    +H     I+ K++  ++       +  S+++++ D         +F L    
Sbjct: 58  ST-MRMVWQH-----IDFKLVTPFLIGGLAGVIPGSMLVAYADPWGFKLFVGLFLL---- 107

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---YGASIYKAT 196
             +    LY        +       V G++ G +G   G+     +L+    G   ++  
Sbjct: 108 --IFPPALYFTPPMALTFGGRWMDGVIGWVGGVMGGFAGLSGPPPILWASIRGWDKHQRR 165

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
                 ++ +   AL+++   G     +         + A L  LP  ++   L  +  +
Sbjct: 166 GVFQAFNSTVLIAALILQTAHGLVTRQV---------LHAALFALPAILIGAWLGARTYH 216

Query: 257 MIGKKYLTIGFSMIMFTTSF 276
            +  +        ++F +  
Sbjct: 217 ALSDRSFRNVVLALLFLSGA 236


>gi|325103926|ref|YP_004273580.1| protein of unknown function DUF81 [Pedobacter saltans DSM 12145]
 gi|324972774|gb|ADY51758.1| protein of unknown function DUF81 [Pedobacter saltans DSM 12145]
          Length = 248

 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 73/204 (35%), Gaps = 19/204 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++  I  I++ SF++  +    G G  L+ VP+                 V     L V+
Sbjct: 1   MLLTITFILIISFIASLVRSTLGFGESLIAVPLFLLFLP-----------VETAVPLSVM 49

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
               +   +  + H  I+    K  IF   +   +  L++ + D+  +     I  +L  
Sbjct: 50  LSIVIALVIVIQDHSKIHFNTAKWLIFYAILGVPLGILILIYGDEVLIKMGLGILIILYS 109

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT-- 196
           +  L        ++    ++      V GFLSG  G   G+    L+++     + A   
Sbjct: 110 LYSLYIKTNKILKEDSRFWL-----FVCGFLSGVFGGAYGLNGPPLVVYGNLRQWSAKHF 164

Query: 197 -ATSAGVSALIAFPALLVRIYSGW 219
            AT       ++F +++     G 
Sbjct: 165 RATLQAYFLPVSFVSVIGYYAKGL 188


>gi|296118328|ref|ZP_06836908.1| inner membrane protein YfcA [Corynebacterium ammoniagenes DSM
           20306]
 gi|295968606|gb|EFG81851.1| inner membrane protein YfcA [Corynebacterium ammoniagenes DSM
           20306]
          Length = 256

 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 85/262 (32%), Gaps = 25/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+I  + ++G +  + G GGGLV++P++      M +   I    A+ T+       + 
Sbjct: 9   ALLIGGAAVAGWVDAVIG-GGGLVLIPLI------MAVVPGIAPATALATNKLAAVSGTA 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +     R     MK       +  + +   +L  + + + F+     +  + +GI +  
Sbjct: 62  SAAFTLMRTVKPPMKETLKLAAIAGVASATGALAATVIQEEFMRPLIIVLLVAVGIFVAF 121

Query: 144 RDRLYCE-----RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
           +           R     +         GF  G  G G G+F  +     +  +  K+ A
Sbjct: 122 KPNFGTGTSDGVRGGWRTWAALAAVAGIGFYDGIFGPGTGMFLIMSFTAIFSQNFIKSAA 181

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  V+       L   I              G V     + +   +I    L  +    
Sbjct: 182 MAKVVNTATNLGGLATFIIG------------GHVWWTLGIALAIANIAGAQLGARTVLG 229

Query: 258 IGKKYLTIGFSMIMFTTSFVFA 279
            G K +      ++   S   A
Sbjct: 230 GGTKLVRYALLTLVVVMSVNLA 251


>gi|271969777|ref|YP_003343973.1| hypothetical protein Sros_8588 [Streptosporangium roseum DSM 43021]
 gi|270512952|gb|ACZ91230.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 317

 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 88/269 (32%), Gaps = 37/269 (13%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   SF    + GL G+GGG +M P++   F       ++    A+ + L   A    + 
Sbjct: 7   LAAGSFFVAIVVGLTGMGGGALMTPMMMLFF-------NVPPLAAVSSDLVASAVMKPVG 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KSFLNKAFAIFCLLMGIL 140
              H R GT+N++++               L+          +  +  A  +  LL+ + 
Sbjct: 60  GAVHMRQGTVNLRLVGWLCAGSVPAAFCGVLVARAFGDGEQIQQTIKYALGV-ALLLAVA 118

Query: 141 MLKRDRLYCERK----------FPDNYVKYIWGMVTGFLSGALGVGGGIFTN--LLMLFY 188
            L        R+              +   + G++ G + G   VG G      LL+L+ 
Sbjct: 119 GLVAKAWLSRREGEVSTDLGEIVVRPFPTLLVGIIGGLVVGISSVGSGSLIIVALLVLYP 178

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
                +   T    +  +   A L  +  G     +               +L  SI   
Sbjct: 179 ALKANQLVGTDLVQAVPLVVSAALGHLLFGDFQLDV------------TTSLLVGSIPGV 226

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            L  ++S       +    ++++  ++  
Sbjct: 227 YLGARVSAWAPGGIIRALLAVVLLASALK 255



 Score = 43.1 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 41/116 (35%), Gaps = 6/116 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G + G+  VG G +++  L   +  +  +        +GT L    P  V + 
Sbjct: 148 LLVGIIGGLVVGISSVGSGSLIIVALLVLYPALKANQL------VGTDLVQAVPLVVSAA 201

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + H   G   + +    +        + + + +      +    A+  L   + +L
Sbjct: 202 LGHLLFGDFQLDVTTSLLVGSIPGVYLGARVSAWAPGGIIRALLAVVLLASALKLL 257


>gi|123437805|ref|XP_001309695.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121891432|gb|EAX96765.1| conserved hypothetical protein [Trichomonas vaginalis G3]
          Length = 448

 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 53/124 (42%), Gaps = 13/124 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L++++ F++G  +G  G+GGG++  P++            I       TS  +I  TS
Sbjct: 309 IFLLMMSGFVAGMAAGFLGIGGGMIKGPMMLAL--------EIEAEEMAATSSFMILMTS 360

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-----DKSFLNKAFAIFCLLM 137
             + +++   G +       +  +  ++ ++  + +  +     ++S      A   ++ 
Sbjct: 361 SATSIQYIAEGLMPWLEFGVFTSMGFVSFLIGVIFLRWLVKKLGNRSIFLYFLAAIIMIS 420

Query: 138 GILM 141
            ILM
Sbjct: 421 AILM 424



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 4/99 (4%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           ++  + G V G  +G LG+GGG+    +ML       +  ATS+ +  + +    +  I 
Sbjct: 310 FLLMMSGFVAGMAAGFLGIGGGMIKGPMMLALEIEAEEMAATSSFMILMTSSATSIQYIA 369

Query: 217 SGWGL--NGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            G           S+GFV+   ++ ++ +  L+  L  +
Sbjct: 370 EGLMPWLEFGVFTSMGFVSF--LIGVIFLRWLVKKLGNR 406


>gi|117920528|ref|YP_869720.1| permease [Shewanella sp. ANA-3]
 gi|117612860|gb|ABK48314.1| permease [Shewanella sp. ANA-3]
          Length = 251

 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 92/258 (35%), Gaps = 27/258 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L+ + +  +   +  FG+GGG++++ V+++      I     + V +G++LG   
Sbjct: 13  IDIFALLTMTAAFTSFFTACFGIGGGVMLLGVMAQVLPPQVIIPLHGV-VQLGSNLG--- 68

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                          +   ++  ++    +   + SL++  +    +    A+F L    
Sbjct: 69  -------RALLGWQHVQWWLISRFLPGALVGAALGSLVLVALPPKVMYLTIALFILYSCW 121

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
                      R         I G VT F+S  +G  G       +       ++  AT 
Sbjct: 122 ------GPKIPRVVLGTVGTIIAGAVTTFISLFVGATG-PLVAAFIKQLEVDRFRTVATF 174

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A   +L     + + ++ G     LP           +L ++    L T L  K+   + 
Sbjct: 175 AMAMSL--QHGVKIIVFEGLDSPILP-------WWPLLLCMILSGALGTWLGFKMLARVT 225

Query: 260 KKYLTIGFSMIMFTTSFV 277
            K+  + F+ ++   +  
Sbjct: 226 DKHFGVAFNWVLTLLAIR 243


>gi|163854421|ref|YP_001628719.1| permease [Bordetella petrii DSM 12804]
 gi|163258149|emb|CAP40448.1| predicted permease [Bordetella petrii]
          Length = 250

 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 87/273 (31%), Gaps = 35/273 (12%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M F+  D    +  ++++ SFL+  L+   G+GGG+ M+ VLS    +  +         
Sbjct: 1   MSFVPPDITTVFAAVLVITSFLTSALTAAMGLGGGVAMLAVLSLGLPVTSVLPVHG---- 56

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
                  +      S     +   +   +L  +         + + ++  +  +      
Sbjct: 57  -------VVQMGSNSGRVIIQRRHLVTPVLLWFALGSLAGIALGASVVISIPDALAKGTL 109

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
           A+F L      + R +     +        + G ++ F +  +G  G      L+   G 
Sbjct: 110 ALFILWS----VYRKKPSATAQRHGKTYFVLGGAISSFCTMLVGATG-PLVAALLARTGL 164

Query: 191 SIYKATATSAGVSAL-----IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
                 AT A    +     I     L   Y+ W                 +  ++   +
Sbjct: 165 IKQPLVATHAACMVIQHGMKILVFGTLGFAYAQWA--------------PLIAAMIASGL 210

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             T + T+    + +    +GF ++M   S   
Sbjct: 211 AGTWVGTRTLDNLPEATFRLGFKIVMTAVSLHM 243


>gi|32267153|ref|NP_861185.1| hypothetical protein HH1654 [Helicobacter hepaticus ATCC 51449]
 gi|32263206|gb|AAP78251.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 222

 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 68/213 (31%), Gaps = 23/213 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ +P L       GI        A+GT+       S  +       G I ++    ++ 
Sbjct: 1   MITIPALLFV----GIPPLQ----ALGTNKFQSCFGSFGASFHFYMKGYIRLREHLPFVI 52

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY--CERKFPDNYVKYIWG 163
           V+ I++++ +L +   +  FL K      ++     L   ++                  
Sbjct: 53  VVFISSLLGTLCVQVFEADFLRKCIPFLLIIFAFYFLFSPKITEASSHALLGFVPLGFVL 112

Query: 164 MVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
              GF  G  G G G      L+   G  +  A A +   +      ++L+   SG    
Sbjct: 113 GGIGFYDGFFGPGTGSFLMLALISLGGFGLLDALAHTKLFNFATNIASMLIFALSGK--- 169

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
                    +     L +     +   L ++++
Sbjct: 170 ---------ILWIVGLCMALGQFIGASLGSRIA 193


>gi|253687230|ref|YP_003016420.1| hypothetical protein PC1_0832 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753808|gb|ACT11884.1| protein of unknown function DUF81 [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 254

 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 75/208 (36%), Gaps = 13/208 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++I  +F++G ++   G GGGL+ +P+            +  M +   +S        
Sbjct: 5   LLILIPIAFIAGAINAAVG-GGGLISMPMFYSTLPH--FTPAQIMGIDKFSS----VMGH 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +MS  +      +  +++            +   M+  +  S++     +   +M     
Sbjct: 58  LMSVRQFATRLRLPWRLMLPTALAAITGAYIGIRMLDFMPSSWMRPVIIVVLAIMVAYTW 117

Query: 143 KRDRL-----YCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            R          E    D     + G+V GF  G +G G G     L + F+     +AT
Sbjct: 118 FRPSFGSQDTSQEPTQNDLIKGAVLGLVIGFYDGFIGPGTGSFLLFLFVRFFHFDFLRAT 177

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGL 224
           A +  V+       LL  I +G    GL
Sbjct: 178 ACAKVVNFGTNSATLLFLIPAGLINYGL 205


>gi|228953943|ref|ZP_04115980.1| hypothetical protein bthur0006_33180 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228805739|gb|EEM52321.1| hypothetical protein bthur0006_33180 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 135

 Score = 45.4 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
           K+  ++Y+   I    ++G ++G FG+G    +   L    +L        +  ++GT++
Sbjct: 14  KEFSMNYLLKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLLRL-------TIQQSVGTTM 66

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VI P ++   + +   G ++  +L   +    +   + +   ++  +  L 
Sbjct: 67  LVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR 118



 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 15/111 (13%)

Query: 162 WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G+VTG ++G+ G+G   F  L LM+    +I ++  T+  V   IA    L        
Sbjct: 27  LGLVTGMMAGSFGIGSAPFIQLGLMVLLRLTIQQSVGTTMLVILPIAIGGGLGYS----- 81

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
                  S G+++   +L +L  ++L   +  K +    +  L   FSMIM
Sbjct: 82  -------SEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLR--FSMIM 123


>gi|325927217|ref|ZP_08188477.1| putative permease [Xanthomonas perforans 91-118]
 gi|325542415|gb|EGD13897.1| putative permease [Xanthomonas perforans 91-118]
          Length = 297

 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 72/211 (34%), Gaps = 13/211 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  + +   +  ++  +F++G +    G GGGL+ +P L                + +GT
Sbjct: 30  VLLELIPTELPWLLCIAFVAGLVDAAVG-GGGLIQLPGLFATLPQQ------APSLILGT 82

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       +  S   + R      + +          + + +  +S + +  +     + 
Sbjct: 83  NKFSAMFGTAASAWRYARTVRFPWRPVLYATAAAFTFSFLGATAVSLMPRQAVRPLILLL 142

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVG-GGIFTNLLMLF 187
            + M I  L +       +      +        G   GF  G  G G G     L + F
Sbjct: 143 LIAMLIYTLIKKDFGALHRPRQIGRRELATALAMGAAIGFYDGFFGPGTGSFLIFLFIRF 202

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSG 218
           +G    +A+A +  V+      AL   + SG
Sbjct: 203 FGLDFLRASAAAKVVNLATNLAALSFFLPSG 233


>gi|219856570|ref|YP_002473692.1| hypothetical protein CKR_3227 [Clostridium kluyveri NBRC 12016]
 gi|219570294|dbj|BAH08278.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 115

 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 70  AMGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           A GTSL ++ P   +++F+++ +   +N++        L I +V  + +   +  + L K
Sbjct: 17  AQGTSLAILLPPAGILAFIDYYKRDQVNLQAGILICMFLIIGSVFGAKISHIISINILRK 76

Query: 129 AFAIFCLLMGILMLKRDR 146
            F I  +L+ I ++  + 
Sbjct: 77  LFGILMILISIKLILENN 94



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 11/96 (11%)

Query: 182 NLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
             L+     S  KA  TS  +    A   +L  I           +    VN+ A ++I 
Sbjct: 4   PALIYLCRFSQLKAQGTSLAILLPPA--GILAFIDY---------YKRDQVNLQAGILIC 52

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              I+ +    K+S++I    L   F ++M   S  
Sbjct: 53  MFLIIGSVFGAKISHIISINILRKLFGILMILISIK 88


>gi|295839070|ref|ZP_06826003.1| integral membrane protein [Streptomyces sp. SPB74]
 gi|295827307|gb|EDY44624.2| integral membrane protein [Streptomyces sp. SPB74]
          Length = 262

 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 8/156 (5%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           +GT+  V    +  +   + R G  +N++I         + + V +L  + +    L   
Sbjct: 52  LGTNKAVAIVGTGGAAFTYVRKGAPVNVRIAVGIGGAALLGSTVGALFAAGISSDVLRPM 111

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDN------YVKYIWGMVTGFLSGALGVGGGIFTNL 183
             +  L +   ++ R     +   P            + G+  G   G  G G G F  L
Sbjct: 112 IMVVLLAVLAFVMLRPAFGTQAAGPAPGRGRVLAAILLAGLGIGAYDGFFGPGTGTFLVL 171

Query: 184 LMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
            +       +  A+AT+  V+      AL+     G
Sbjct: 172 ALTAVLRLDLVSASATAKIVNTCTNLGALVTFAVQG 207


>gi|78185194|ref|YP_377629.1| hypothetical protein Syncc9902_1627 [Synechococcus sp. CC9902]
 gi|78169488|gb|ABB26585.1| conserved hypothetical protein [Synechococcus sp. CC9902]
          Length = 255

 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 63/162 (38%), Gaps = 3/162 (1%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            +  H A+ TS   I PT++   + H R G I ++           + ++   +    + 
Sbjct: 40  DLPAHQALATSSFAIVPTALAGTIIHLRGGRIPLRPALGIGLAAFASALLFGGLADRAEG 99

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM--VTGFLSGALGVGGGIFT 181
             L     +  +++   + +R             V ++ G+  + G+ +G LG+GGG+  
Sbjct: 100 WMLLAMQTVLYVVLAFCVRERPSTDELSDEVSTPVSWLAGVGCIAGWTAGMLGLGGGLVM 159

Query: 182 NLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
             LM       I++A   S       A  A L  ++ G G+ 
Sbjct: 160 VPLMSGPLSVPIHQAVRLSTVAVLCSASAASLQFVHEGRGIP 201


>gi|33866262|ref|NP_897821.1| hypothetical protein SYNW1730 [Synechococcus sp. WH 8102]
 gi|33639237|emb|CAE08245.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
          Length = 257

 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 5/160 (3%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           H A+ TS   I PT++   + H R G++ ++           + ++   +   V    L 
Sbjct: 44  HQALATSSFAIVPTALAGLVSHLRSGSLPVRTGLAIGLSAFGSALLFGGLAGVVSGWLLL 103

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALG-----VGGGIFTN 182
               +  +++   +  R+      +  +   +       G ++G         GG +   
Sbjct: 104 AMQTLIYVVLAFAVRVREEEATPGEDEETGGQVGLLAGVGCIAGWTAGMLGLGGGLVMVP 163

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           L+    G  I++A   S       A  A L  ++ G G+ 
Sbjct: 164 LMNGPLGVPIHRAVRLSTVAVFCSASAASLQFLHEGRGVP 203


>gi|218886856|ref|YP_002436177.1| hypothetical protein DvMF_1764 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757810|gb|ACL08709.1| protein of unknown function DUF81 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 325

 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G ++G+FG+G G   VPVL+           + + VA+GTS  +++ T   + 
Sbjct: 211 LLLFIVIGLMAGMFGLGAGWANVPVLNLLM-------GVPLKVAVGTSKFLLSITDTSAA 263

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             +   G +   +    I  L + + V   +++     F+        L  G   L +
Sbjct: 264 WVYLNQGCVIPLMAIPSIIGLMLGSFVGVRLLAVAKPKFIRYMVIGVLLFSGGKALLK 321



 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 90/251 (35%), Gaps = 36/251 (14%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++   F+ G ++ L GVGGG++ VP++S  F          +    G  L V    ++
Sbjct: 54  TALLFFCFILGIIAVLAGVGGGVLFVPLVSGFFPF-------HLDFVRGAGLLVALAGAL 106

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +     +    ++++      +    ++V +++   +  + +        L + +L+L 
Sbjct: 107 AAGPGLLKRNLASLRLALPVALIASACSIVGAMVGLALPTNVVQICLGGTILFIAVLLLV 166

Query: 144 RDRLYCERKFPDNYVKYIWG----------------------------MVTGFLSGALGV 175
                       + +    G                            +V G ++G  G+
Sbjct: 167 SKNTVRPEVKKQDAISVALGMDGVFIEPSTGEVIDWKTHRTLPGLLLFIVIGLMAGMFGL 226

Query: 176 GGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           G G     ++ L  G  +  A  TS  + ++    A  V +  G  +  +   S+  + +
Sbjct: 227 GAGWANVPVLNLLMGVPLKVAVGTSKFLLSITDTSAAWVYLNQGCVIPLMAIPSIIGLML 286

Query: 235 GAVLIILPISI 245
           G+ + +  +++
Sbjct: 287 GSFVGVRLLAV 297


>gi|291456622|ref|ZP_06596012.1| putative integral membrane protein [Bifidobacterium breve DSM
           20213]
 gi|291381899|gb|EFE89417.1| putative integral membrane protein [Bifidobacterium breve DSM
           20213]
          Length = 266

 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 7/99 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VPVL               H A   SL ++  T+++S +   R G +  +    +  
Sbjct: 27  ILSVPVLVYLL-------GQEPHAASAGSLVIVGLTALVSLIPRSREGHVRWRDGLVFGV 79

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  + TV+ S +   VD   L   F++  + +G++ML++
Sbjct: 80  LSSVGTVLGSRLSVLVDPRTLMLLFSVLLVAVGVMMLRK 118


>gi|21245010|ref|NP_644592.1| hypothetical protein XAC4298 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21110736|gb|AAM39128.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 259

 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 72/211 (34%), Gaps = 13/211 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  + +   +  ++  +F++G +    G GGGL+ +P L                + +GT
Sbjct: 2   VLLELIPTELPWLLCIAFVAGLVDAAVG-GGGLIQLPGLFATLPQQ------APSLILGT 54

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       +  S   + R      + +          + + +  +S + +  +     + 
Sbjct: 55  NKFSAMFGTAASAWRYARTVRFPWRPVLYATAAAFTFSFLGATAVSLMPRQAVRPLILML 114

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVG-GGIFTNLLMLF 187
            + M I  L +       +      +        G   GF  G  G G G     L + F
Sbjct: 115 LIAMLIYTLVKKDFGALHRPRQVGRRELATALAMGAAIGFYDGFFGPGTGSFLIFLFIRF 174

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSG 218
           +G    +A+A +  V+      AL   + SG
Sbjct: 175 FGLDFLRASAAAKVVNLATNLAALSFFLPSG 205


>gi|305666486|ref|YP_003862773.1| hypothetical protein FB2170_09461 [Maribacter sp. HTCC2170]
 gi|88708753|gb|EAR00988.1| hypothetical protein FB2170_09461 [Maribacter sp. HTCC2170]
          Length = 232

 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 85/246 (34%), Gaps = 24/246 (9%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
             +  +  + G G  +  VP+ +  F    +             L  I   S        
Sbjct: 1   MFAEIIGTIGGFGSSVFFVPIGNFYFDFHSVLG-----------LTAIFHLSSNMSKIVL 49

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
               ++ K++ +      +  V+   +   +D + L    A+F + + +L L +  L   
Sbjct: 50  FKKGLDKKLIMNIGLPSILFVVIGGFLSKILDSTILEILLAVFLISLSLLFLYKKGLVVS 109

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPA 210
              P+       G+++GF +G LG GG     L M  +        ATSA +   I F  
Sbjct: 110 ---PNRKNAITGGVISGFSAGLLGTGG-AIRGLTMTAFNLEKSVFIATSAFIDFFIDFTR 165

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            +V   +G+            + +  +++I  +      +  ++   I +        ++
Sbjct: 166 TIVYYQNGYIHKHD------LIYLPFLIVIGLVGTY---IGKRILKFIPQDKFKKISLIL 216

Query: 271 MFTTSF 276
           + +  F
Sbjct: 217 ILSIGF 222


>gi|330992695|ref|ZP_08316639.1| hypothetical protein SXCC_02598 [Gluconacetobacter sp. SXCC-1]
 gi|329760173|gb|EGG76673.1| hypothetical protein SXCC_02598 [Gluconacetobacter sp. SXCC-1]
          Length = 360

 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 72/199 (36%), Gaps = 13/199 (6%)

Query: 22  YICLIIVASFLSGT-LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            + L+I+A+  +   LS + G G GL+++P+L        +  ++ +  A          
Sbjct: 21  LLWLLILAASTAAFGLSAVSGGGAGLILMPLLGLVLPGTQVPATLSIGTA---------- 70

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +         I   I++ +         + +  +S +D + L+    +F +    L
Sbjct: 71  -ASSAARILSFRHAIRWDIVRHFAPTALPFAALGAWALSRMDPACLSLLLGLFLMGNLPL 129

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           + +    +   K       +  G   GF+SG  G  G +F        G    +  AT A
Sbjct: 130 LFRGSASHVSVKPVRIASLHALGAAAGFISGFTGAVGLVFNGFYYRL-GLRKEEIVATRA 188

Query: 201 GVSALIAFPALLVRIYSGW 219
               ++    +++    G 
Sbjct: 189 ANEIMLHVLKIMLYATFGL 207


>gi|303326569|ref|ZP_07357012.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
 gi|302864485|gb|EFL87416.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
          Length = 350

 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 95/290 (32%), Gaps = 57/290 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  + +  F+ G +SG  G GG  ++ P +            +   VA+ +++    P +
Sbjct: 19  VGFLFIVGFIGGLVSGFIGSGGAFILTPGMMGL--------GVPGTVAVASNMCHKFPKA 70

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF--------LNKAFAIFC 134
           ++  ++  R+G +++K+         +       +  H+ + +        ++ AF    
Sbjct: 71  LVGALKRFRYGQVDVKMGLVIAASAGVGVQCGIAIQRHILERWGQAGSDLYVSLAFVAVL 130

Query: 135 LLMGILMLKR------------DRLYCERKF-----------------PDNYVKYIWGMV 165
             +G  +L                    R+                     +     G  
Sbjct: 131 FSVGGYVLYDALRCNRRNGDCGGTPALARRLQAVNLPPMLTFRRSGLRISLWFTLPVGFA 190

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           TG L+  + VGG I    L+   G     A+ T    + ++     +     G       
Sbjct: 191 TGMLAATIAVGGFIGVPGLIYVLGVPGLIASGTELVTAFVMGLCGSVNWALHGM------ 244

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                 ++I  VLIIL  S+L   L    +  + +  + +    IM   +
Sbjct: 245 ------IDIRLVLIILGGSLLGVQLGAIGTTYVRENMIKLVMGTIMLIVA 288


>gi|257076684|ref|ZP_05571045.1| hypothetical protein Faci_06469 [Ferroplasma acidarmanus fer1]
          Length = 283

 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 57/274 (20%), Positives = 102/274 (37%), Gaps = 16/274 (5%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            D  +    L I++    G   GL G GG ++ VP+       +GI+     H+A+GT+ 
Sbjct: 2   IDVTLIQYILAIISGIAVGFSLGLIGGGGSILAVPLFIY---FVGINHP---HLAIGTTA 55

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
             +  T+ ++F +H R    N+K+   +  V  +  ++ S +   +    L   F++  +
Sbjct: 56  LAVGITAYINFAQHLRKKNANIKLGGVFALVGIVGVLIGSTIGLIIKGGELLFFFSMLMI 115

Query: 136 LMGILMLKRD-RLYCERKFPDNYVKYIWGMVTG-------FLSGALGVGGGIFTNLLMLF 187
           ++GI M     R        +   +  +G V+G               GG +    L+  
Sbjct: 116 IIGIYMYISKCRAVPNEDCKELAKQTKYGKVSGYSLIVGFASGFFGIGGGFLIVPGLLAS 175

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
               I  A  TS            +       GL  +    +G V     ++ +   I  
Sbjct: 176 SKIKINMAIGTSLLAVGTFGIVTAIRYSIVAPGLQFISSGMIGDVLFLVAIVYVIGGIFG 235

Query: 248 TPLATKLSYMIGKKY--LTIGFSMIMFTTSFVFA 279
             L TKLS  +G +   L   FS+I+       A
Sbjct: 236 GYLGTKLSVNLGGRKGTLRKVFSIIIILVGIYVA 269


>gi|241762423|ref|ZP_04760501.1| protein of unknown function DUF81 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|241373017|gb|EER62675.1| protein of unknown function DUF81 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 255

 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 82/215 (38%), Gaps = 16/215 (7%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
            A+GT+    A     + +   +   + ++ L   +F   I + + ++++   D+  LNK
Sbjct: 45  TALGTNKFQSAIGEFSAALHFWKSRHLKLRPLYLSLFSTVIASALGTILLQICDEKRLNK 104

Query: 129 AFAIFCLLMGILMLKRDRLYCERK---FPDNY-VKYIWGMVTGFLSGALGVGGGIFTNLL 184
                 L + +  +     Y + +    P+N  +    G   GF +G  G G G    ++
Sbjct: 105 IVPWLLLSVFLYYIFSPTSYSQPEKESLPENPKLLPCLGGAVGFYNGFFGPGTGAIWTII 164

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +  +   +    AT       IA     + I+ G           G VN  A L++   S
Sbjct: 165 LN-HIYRLRLNIATMYAKPLNIAGNVTALTIFIGG----------GKVNYFAALMMGIGS 213

Query: 245 ILITPLATKLSYMIGKKYLTIGF-SMIMFTTSFVF 278
            L   +   L      K L + F ++++ + +F F
Sbjct: 214 FLGGQIGAYLVIYKSSKLLRLLFLTIMLVSVTFSF 248


>gi|192359724|ref|YP_001981862.1| hypothetical protein CJA_1372 [Cellvibrio japonicus Ueda107]
 gi|190685889|gb|ACE83567.1| putative membrane protein [Cellvibrio japonicus Ueda107]
          Length = 272

 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 8/96 (8%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI-NMKILKDWIFVLP 108
           P+L           ++ M  A+ TSL +IA  S   F+ H       +   L        
Sbjct: 184 PLLLAL-------SAVSMAQAVSTSLLIIALISSSGFISHLLLSETKHWNWLLPVTLGGV 236

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +  ++   +   +  + L K FA   L++ ++M+ R
Sbjct: 237 LGMIIGQGISHKIANALLQKIFAAGLLVVSVMMIFR 272



 Score = 42.4 bits (99), Expect = 0.080,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 48/123 (39%), Gaps = 10/123 (8%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT---INMK 98
            GG +  VP+L            + M  A G SLG +A +++ + + +R   T   +  K
Sbjct: 18  AGGSVFAVPLLLLL-------SDMPMADATGISLGAVAASTLYASLRNRFSRTSPPVLWK 70

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV 158
                     +T  +   +   +++ +L  +F++  LL+ + M    +   +        
Sbjct: 71  PGLILALSGVVTAPLGQWLGLQLNERWLMGSFSLLALLIAVRMWMSAQKNPQAAQVVRAG 130

Query: 159 KYI 161
            +I
Sbjct: 131 HFI 133


>gi|218961280|ref|YP_001741055.1| putative Membrane protein, precursor [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729937|emb|CAO80849.1| putative Membrane protein, precursor [Candidatus Cloacamonas
           acidaminovorans]
          Length = 257

 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 74/205 (36%), Gaps = 17/205 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +DYI ++    FL+G +  + G GGGL+ +P         GI      H+A+GT+     
Sbjct: 9   LDYIIVLPFI-FLAGFIDSIAG-GGGLISLPAYWSV----GIPP----HLALGTNKFSSC 58

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ S   + +   I++ +      +  I + + +     V    LN    I    + I
Sbjct: 59  CGTLFSTANYFKAKMIDIPVALVSAGMAIIGSWLGASTALRVSSQVLNYLLIILIPAVAI 118

Query: 140 LMLKRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASI 192
             L    L  + K           +  I G+  GF  G  G G G F  L          
Sbjct: 119 FSLLNRNLGMQSKAEFLAKRLRMLLGGIAGLGIGFYDGFFGPGTGTFLILIYTSLLHYDF 178

Query: 193 YKATATSAGVSALIAFPALLVRIYS 217
             A   +  V+      AL+   ++
Sbjct: 179 VTANGNTKVVNLASNLSALITFAFA 203


>gi|302526250|ref|ZP_07278592.1| conserved hypothetical protein [Streptomyces sp. AA4]
 gi|302435145|gb|EFL06961.1| conserved hypothetical protein [Streptomyces sp. AA4]
          Length = 244

 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 80/259 (30%), Gaps = 20/259 (7%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           D I  +IV   L+G      G GG    V      F    +  +     A+ T +     
Sbjct: 3   DVILALIVTGLLAGIGITAVGPGG----VLATVGLFVFTSLTPAQVAGTAIVTHVATGIL 58

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S       +       +          + T +  L+ S V           F L++ + 
Sbjct: 59  GSAAFVHSGQLREPETRRTAGVLAAAATVGTPLGVLLNSWVSAKAFGIVLGGFALVVAVF 118

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           +  + R           V    G     ++G +GVGG +    L++  G  +  A A + 
Sbjct: 119 VGLKGRERAV----GLPVAGAIGAGVAVVAGLVGVGGPMLAVPLLVVAGMPVLGALAAAQ 174

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
             S +IA    L  +              G V+     I+    +    +  ++++ +  
Sbjct: 175 VQSVVIASVGTLGYVLH------------GAVDWRLAAIVGIPELAGVLIGWRIAHALPT 222

Query: 261 KYLTIGFSMIMFTTSFVFA 279
           K L      ++   +   A
Sbjct: 223 KTLKAALVAVLVGIAPYLA 241


>gi|53720324|ref|YP_109310.1| hypothetical protein BPSL2714 [Burkholderia pseudomallei K96243]
 gi|76808550|ref|YP_334568.1| permease [Burkholderia pseudomallei 1710b]
 gi|121599066|ref|YP_992229.1| hypothetical protein BMASAVP1_A0889 [Burkholderia mallei SAVP1]
 gi|124385057|ref|YP_001028674.1| hypothetical protein BMA10229_A2722 [Burkholderia mallei NCTC
           10229]
 gi|126450444|ref|YP_001081424.1| hypothetical protein BMA10247_1887 [Burkholderia mallei NCTC 10247]
 gi|254175700|ref|ZP_04882360.1| putative membrane protein [Burkholderia mallei ATCC 10399]
 gi|254180883|ref|ZP_04887481.1| putative membrane protein [Burkholderia pseudomallei 1655]
 gi|254191724|ref|ZP_04898227.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254260104|ref|ZP_04951158.1| putative membrane protein [Burkholderia pseudomallei 1710a]
 gi|254356466|ref|ZP_04972742.1| putative membrane protein [Burkholderia mallei 2002721280]
 gi|52210738|emb|CAH36722.1| putative membrane protein [Burkholderia pseudomallei K96243]
 gi|76578003|gb|ABA47478.1| predicted permease [Burkholderia pseudomallei 1710b]
 gi|121227876|gb|ABM50394.1| putative membrane protein [Burkholderia mallei SAVP1]
 gi|124293077|gb|ABN02346.1| putative membrane protein [Burkholderia mallei NCTC 10229]
 gi|126243314|gb|ABO06407.1| putative membrane protein [Burkholderia mallei NCTC 10247]
 gi|148025463|gb|EDK83617.1| putative membrane protein [Burkholderia mallei 2002721280]
 gi|157939395|gb|EDO95065.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237]
 gi|160696744|gb|EDP86714.1| putative membrane protein [Burkholderia mallei ATCC 10399]
 gi|184211422|gb|EDU08465.1| putative membrane protein [Burkholderia pseudomallei 1655]
 gi|254218793|gb|EET08177.1| putative membrane protein [Burkholderia pseudomallei 1710a]
          Length = 262

 Score = 45.4 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 56/269 (20%), Positives = 88/269 (32%), Gaps = 33/269 (12%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L  ++    G L GL GVGGG +M P+L   F       ++    A+GT L   A T   
Sbjct: 7   LYSLSGLFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAALTKAT 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI------SHVDKSFLNKAFAIFCLL-- 136
               H   GT+  +I             +T   +      S      +        LL  
Sbjct: 60  GTFVHGLKGTVEWRITGRLAAGSVPAAAITLWFLHAHGMHSQETSRMIQFVLGAALLLTS 119

Query: 137 --------MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
                   +     KR R              + G V G L     VG G     ++L  
Sbjct: 120 LSLLLRPQLAAFAAKRTRALPPNPTRTLAATVLTGAVLGVLVSLTSVGAGAIGVTVLLL- 178

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
              +Y A +T+  V + IA    L        + G+  W LG V+   ++ +L  S+   
Sbjct: 179 ---LYPALSTTRIVGSDIAHAVPLTL------VAGVGHWMLGSVDWAMLVSLLIGSVPGI 229

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + + LS    +  L    +  +      
Sbjct: 230 VVGSHLSARAPEGLLRRVLAATLVAVGAK 258



 Score = 42.8 bits (100), Expect = 0.062,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 48/118 (40%), Gaps = 6/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  L  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 151 VLTGAVLGVLVSLTSVGAGAIGVTVLLLLY------PALSTTRIVGSDIAHAVPLTLVAG 204

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + H   G+++  +L   +       VV S + +   +  L +  A   + +G  ++  
Sbjct: 205 VGHWMLGSVDWAMLVSLLIGSVPGIVVGSHLSARAPEGLLRRVLAATLVAVGAKLVLS 262


>gi|297194501|ref|ZP_06911899.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297152282|gb|EDY62598.2| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 261

 Score = 45.4 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 49/157 (31%), Gaps = 9/157 (5%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+  V    +  + + + R   + ++            ++  +   + +    L    
Sbjct: 50  LGTNKAVAIVGTSGAAITYVRKAPVQVRTAVRIGLAALAGSMGGAFFAAGISSDVLRPVI 109

Query: 131 AIFCLLMGILMLKRDRLYCERK--------FPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            +  L +   ++ R                        + G   GF  G  G G G F  
Sbjct: 110 MVVLLGVAAFVMLRPSFGAAADADKRRVTRTRTVVAIVLVGGGIGFYDGLFGPGTGTFLV 169

Query: 183 LLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
           L +       +  A+AT+  V+      AL +  Y G
Sbjct: 170 LALTAVLHLDLVTASATAKIVNVCTNGGALAMFAYQG 206


>gi|290977704|ref|XP_002671577.1| predicted protein [Naegleria gruberi]
 gi|284085147|gb|EFC38833.1| predicted protein [Naegleria gruberi]
          Length = 537

 Score = 45.4 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 43/123 (34%), Gaps = 20/123 (16%)

Query: 129 AFAIFCLLMGILMLKRDRLYCER-----------KFPDNYVKYIWGMVTGFLSGALGVGG 177
                 +++   +L   R   +R            + +        ++ G L+  LG+GG
Sbjct: 358 IIGAIMIIVAAYLLIDYRRKVKRGHVFVQGDVKWNWINVTFYPGACLIAGILAAMLGIGG 417

Query: 178 GIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG---------WGLNGLPPWS 228
           G+  + L+L  G+      AT+A +    +  +       G         +GL G     
Sbjct: 418 GMIKSPLLLLLGSDPAVGAATAAFMIFFTSSISSAQFAIVGRIPFDYGMLYGLTGFVSGF 477

Query: 229 LGF 231
           +G+
Sbjct: 478 VGY 480



 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 59/135 (43%), Gaps = 12/135 (8%)

Query: 11  MVFLSKDCVVDYI--CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMH 68
            VF+  D   ++I       A  ++G L+ + G+GGG++  P+L     L+G D ++   
Sbjct: 382 HVFVQGDVKWNWINVTFYPGACLIAGILAAMLGIGGGMIKSPLLL----LLGSDPAVGA- 436

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
               T+  +I  TS +S  +    G I       +     ++  V    ++   + +  +
Sbjct: 437 ---ATAAFMIFFTSSISSAQFAIVGRIPFDYGMLYGLTGFVSGFVGYFFVTFGVERWGKR 493

Query: 129 AFAIFCLLMGILMLK 143
             ++  L +G+++L 
Sbjct: 494 --SLIILCVGLVLLF 506


>gi|330876465|gb|EGH10614.1| hypothetical protein PSYMP_14234 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 270

 Score = 45.4 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 15/119 (12%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
           + V    G++ G +    G GGGI    L++F             G+   I   A +  +
Sbjct: 5   SLVGAGLGVIIGAVLALTGAGGGILAVPLLVF-------------GLGLTIVEAAPVGLL 51

Query: 216 YSGWGLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
             G          L  G V   A   I  I +L+ P+   L++ +    L + FS ++ 
Sbjct: 52  AVGLAAGVGAVLGLRQGIVRYRAAGYIAGIGVLMAPIGLWLAHRLPNTPLALIFSAVLL 110



 Score = 40.8 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 51/143 (35%), Gaps = 7/143 (4%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++D+  +      + G +  L G GGG++ VP+L     L  ++ +    +A+G + GV 
Sbjct: 1   MIDHSLVGAGLGVIIGAVLALTGAGGGILAVPLLVFGLGLTIVEAAPVGLLAVGLAAGVG 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           A   +       R G +  +       +  +   +   +   +  + L   F+   L   
Sbjct: 61  AVLGL-------RQGIVRYRAAGYIAGIGVLMAPIGLWLAHRLPNTPLALIFSAVLLYAC 113

Query: 139 ILMLKRDRLYCERKFPDNYVKYI 161
             +  R         P    + +
Sbjct: 114 GRIFIRASRELRAGRPAPRAQML 136



 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 39/98 (39%), Gaps = 7/98 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V++P L++          + +   + TSL VIA  S  S +     G ++  +   +  
Sbjct: 177 FVIIPALTRY-------SDLDVKSVVATSLAVIALVSTGSVIIASLSGVMHWAVGAPFAL 229

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                 +    +  ++    L + FA+  ++  ++++ 
Sbjct: 230 GAVAGLLGGRQIARYLAGPRLQQLFAVCGIVAALMLVF 267


>gi|237801572|ref|ZP_04590033.1| hypothetical protein POR16_22301 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331024432|gb|EGI04488.1| hypothetical protein POR16_22301 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 151

 Score = 45.4 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 15/115 (13%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G + G +    G GGGI    L++F             G+   I   A +  +  G 
Sbjct: 9   AGLGAIIGVVLALTGAGGGILAVPLLVF-------------GLGLTIVEAAPVGLLAVGL 55

Query: 220 GLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
                    L  G V   A   I  I +L++P+   L++ +    L + FS ++ 
Sbjct: 56  AAGVGAVLGLRQGIVRYRAAGYIAGIGVLMSPIGLWLAHRLPAAPLALIFSTVLL 110



 Score = 43.9 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 7/126 (5%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +V++  L      + G +  L G GGG++ VP+L     L  ++ +    +A+G + GV 
Sbjct: 1   MVEHQLLGAGLGAIIGVVLALTGAGGGILAVPLLVFGLGLTIVEAAPVGLLAVGLAAGVG 60

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           A   +       R G +  +       +  + + +   +   +  + L   F+   L   
Sbjct: 61  AVLGL-------RQGIVRYRAAGYIAGIGVLMSPIGLWLAHRLPAAPLALIFSTVLLYAC 113

Query: 139 ILMLKR 144
             M  R
Sbjct: 114 GRMFMR 119


>gi|110636987|ref|YP_677194.1| transmembrane protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110279668|gb|ABG57854.1| possible transmembrane protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 338

 Score = 45.4 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 88/251 (35%), Gaps = 19/251 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + I    ++  L G  G+G G+      S     +G+  +        T     +  +
Sbjct: 84  LLIFISIGVVTQLLDGALGMGYGV----ACSSFLLGLGLTPAYT----SATVHLAKSFNT 135

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H R  ++N K+ +  +      +V+ + +++ V  + L K F  F LL+  +++
Sbjct: 136 GTSGISHLRVRSLNQKLFRSLLIPGIAGSVLGAWLLADVIHTDLVKPFVAFYLLILGILI 195

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
                             +   V GF+    G G G      +L  G        +   V
Sbjct: 196 LLKPFREPNDKKRVKKISLLAAVGGFIDSIGGGGWGPIVTSNLLQKGRVSSYTVGSVNIV 255

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
              +A  A L  IY              F    A++ ++   +L  P  + +   I +  
Sbjct: 256 EFFVALSAALTFIYFDK-----------FSGWQAIIGLIIGGVLAYPFTSFIVSKINRNV 304

Query: 263 LTIGFSMIMFT 273
           +T+   +I+  
Sbjct: 305 ITLLLGLIVIV 315


>gi|283851032|ref|ZP_06368317.1| protein of unknown function DUF81 [Desulfovibrio sp. FW1012B]
 gi|283573678|gb|EFC21653.1| protein of unknown function DUF81 [Desulfovibrio sp. FW1012B]
          Length = 244

 Score = 45.4 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 66/193 (34%), Gaps = 21/193 (10%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
            F +G   GL G G  LV +P L              M +   T +  I    + + +  
Sbjct: 13  GFGAGFTQGLAGFGSTLVALPCLILV-----------MDLRQATPVACILAIVLNAVLAC 61

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
           R  G +  + L   +        V +  +  + +++L         L+ + +L     + 
Sbjct: 62  RLRGHVRTRALGLLLAASLPGMAVGAYGLRSLPEAWLKG-------LLAMTILGYVAWFL 114

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---YGASIYKATATSAGVSALI 206
            R  P     + +G+  GFL+G+LG   G+    ++ +    G        T      L 
Sbjct: 115 RRSGPARRADWKFGVAAGFLAGSLGAAIGVNGPPVVAWVSRLGIDRNAVRGTQTAYFFLA 174

Query: 207 AFPALLVRIYSGW 219
               +  +  +G 
Sbjct: 175 GIGVVASQAAAGL 187


>gi|303257452|ref|ZP_07343465.1| putative membrane protein [Burkholderiales bacterium 1_1_47]
 gi|330999999|ref|ZP_08323695.1| hypothetical protein HMPREF9439_01328 [Parasutterella
           excrementihominis YIT 11859]
 gi|302859809|gb|EFL82887.1| putative membrane protein [Burkholderiales bacterium 1_1_47]
 gi|329573147|gb|EGG54764.1| hypothetical protein HMPREF9439_01328 [Parasutterella
           excrementihominis YIT 11859]
          Length = 255

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 83/256 (32%), Gaps = 26/256 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +   IVA F++G +  + G G G V  P L            +  H+A+GT     +  S
Sbjct: 8   LIFCIVAFFVAGFIDSIAG-GAGFVTAPSLLLI--------GMPPHMALGTGKLATSIGS 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V++     R   I  KI+   +          +     +D + + K   I   L  +  +
Sbjct: 59  VVALWTFWRSNLILKKIVPVGVLSAMAGASFGAFCALQIDGATMGKVIVIMLPLGILFTV 118

Query: 143 KRDRLYCERKFPDN----YVKYIWGMVTGFLSGALGVGGGIFT-NLLMLFYGASIYKATA 197
                                 + G++ GF  G  G G G F    L +F    + +++ 
Sbjct: 119 LTGGFKLTEGELPKDHFWLRVVLIGVLIGFYEGFFGPGAGTFFLIALHVFLKIGMVQSSG 178

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T+   +    F A +                   V     +     S+L   +    +  
Sbjct: 179 TAKAFNIAANFAAFMTFASGA------------AVCYEIAIPCAIASMLGNRVGAYYAIK 226

Query: 258 IGKKYLTIGFSMIMFT 273
           IG K++     +++  
Sbjct: 227 IGGKFVRNILYIVLII 242


>gi|53725539|ref|YP_103606.1| hypothetical protein BMA2024 [Burkholderia mallei ATCC 23344]
 gi|67643878|ref|ZP_00442621.1| putative membrane protein [Burkholderia mallei GB8 horse 4]
 gi|167000876|ref|ZP_02266681.1| putative membrane protein [Burkholderia mallei PRL-20]
 gi|167720918|ref|ZP_02404154.1| hypothetical protein BpseD_18064 [Burkholderia pseudomallei DM98]
 gi|167739896|ref|ZP_02412670.1| hypothetical protein Bpse14_17684 [Burkholderia pseudomallei 14]
 gi|167817116|ref|ZP_02448796.1| hypothetical protein Bpse9_18402 [Burkholderia pseudomallei 91]
 gi|167825528|ref|ZP_02456999.1| hypothetical protein Bpseu9_17795 [Burkholderia pseudomallei 9]
 gi|167847016|ref|ZP_02472524.1| hypothetical protein BpseB_17195 [Burkholderia pseudomallei B7210]
 gi|167895599|ref|ZP_02483001.1| hypothetical protein Bpse7_17784 [Burkholderia pseudomallei 7894]
 gi|167903995|ref|ZP_02491200.1| hypothetical protein BpseN_17224 [Burkholderia pseudomallei NCTC
           13177]
 gi|167912249|ref|ZP_02499340.1| hypothetical protein Bpse112_17310 [Burkholderia pseudomallei 112]
 gi|167920208|ref|ZP_02507299.1| hypothetical protein BpseBC_16807 [Burkholderia pseudomallei
           BCC215]
 gi|217420351|ref|ZP_03451856.1| putative membrane protein [Burkholderia pseudomallei 576]
 gi|226193762|ref|ZP_03789364.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9]
 gi|237813546|ref|YP_002897997.1| hypothetical protein GBP346_A3322 [Burkholderia pseudomallei
           MSHR346]
 gi|254196121|ref|ZP_04902546.1| putative membrane protein [Burkholderia pseudomallei S13]
 gi|254202299|ref|ZP_04908662.1| putative membrane protein [Burkholderia mallei FMH]
 gi|254207632|ref|ZP_04913982.1| putative membrane protein [Burkholderia mallei JHU]
 gi|254299007|ref|ZP_04966457.1| putative membrane protein [Burkholderia pseudomallei 406e]
 gi|52428962|gb|AAU49555.1| membrane protein, putative [Burkholderia mallei ATCC 23344]
 gi|147746546|gb|EDK53623.1| putative membrane protein [Burkholderia mallei FMH]
 gi|147751526|gb|EDK58593.1| putative membrane protein [Burkholderia mallei JHU]
 gi|157808742|gb|EDO85912.1| putative membrane protein [Burkholderia pseudomallei 406e]
 gi|169652865|gb|EDS85558.1| putative membrane protein [Burkholderia pseudomallei S13]
 gi|217395763|gb|EEC35780.1| putative membrane protein [Burkholderia pseudomallei 576]
 gi|225934067|gb|EEH30052.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9]
 gi|237505390|gb|ACQ97708.1| putative membrane protein [Burkholderia pseudomallei MSHR346]
 gi|238525335|gb|EEP88763.1| putative membrane protein [Burkholderia mallei GB8 horse 4]
 gi|243063301|gb|EES45487.1| putative membrane protein [Burkholderia mallei PRL-20]
          Length = 264

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 56/269 (20%), Positives = 88/269 (32%), Gaps = 33/269 (12%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L  ++    G L GL GVGGG +M P+L   F       ++    A+GT L   A T   
Sbjct: 9   LYSLSGLFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAALTKAT 61

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI------SHVDKSFLNKAFAIFCLL-- 136
               H   GT+  +I             +T   +      S      +        LL  
Sbjct: 62  GTFVHGLKGTVEWRITGRLAAGSVPAAAITLWFLHAHGMHSQETSRMIQFVLGAALLLTS 121

Query: 137 --------MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
                   +     KR R              + G V G L     VG G     ++L  
Sbjct: 122 LSLLLRPQLAAFAAKRTRALPPNPTRTLAATVLTGAVLGVLVSLTSVGAGAIGVTVLLL- 180

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
              +Y A +T+  V + IA    L        + G+  W LG V+   ++ +L  S+   
Sbjct: 181 ---LYPALSTTRIVGSDIAHAVPLTL------VAGVGHWMLGSVDWAMLVSLLIGSVPGI 231

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + + LS    +  L    +  +      
Sbjct: 232 VVGSHLSARAPEGLLRRVLAATLVAVGAK 260



 Score = 42.4 bits (99), Expect = 0.064,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 48/118 (40%), Gaps = 6/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  L  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 153 VLTGAVLGVLVSLTSVGAGAIGVTVLLLLY------PALSTTRIVGSDIAHAVPLTLVAG 206

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + H   G+++  +L   +       VV S + +   +  L +  A   + +G  ++  
Sbjct: 207 VGHWMLGSVDWAMLVSLLIGSVPGIVVGSHLSARAPEGLLRRVLAATLVAVGAKLVLS 264


>gi|54025093|ref|YP_119335.1| hypothetical protein nfa31240 [Nocardia farcinica IFM 10152]
 gi|54016601|dbj|BAD57971.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 259

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 63/183 (34%), Gaps = 13/183 (7%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+++P L        +   I    A+GT+       +  S +   R   I  K+L  
Sbjct: 29  GGGLIVLPTLFL------VSPGIAPATALGTNKLAAVAGTTASVLTFARKVPIRWKLLLP 82

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL------YCERKFPDN 156
              +  + + + +  +S +D+        +  + + + +  R  +          +    
Sbjct: 83  AAVIAAVASGLGAAAVSLIDRDLFIPIVMVVLVGVAVFVTLRPTIGITMATDPPTRRKTV 142

Query: 157 YVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            V  +   + G   G LG G G           G    +A A +  ++      AL+   
Sbjct: 143 LVVALAAGLIGAYDGLLGPGTGTFLIITFATLLGTEFVRAAAMAKVINCGSNVGALIFFG 202

Query: 216 YSG 218
            +G
Sbjct: 203 LTG 205


>gi|303327530|ref|ZP_07357971.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
 gi|302862470|gb|EFL85403.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
          Length = 282

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L ++     G ++G+FG+G G   VPVL+           + + V++GTS  +++ T   
Sbjct: 166 LGLLFFIAIGIMAGMFGLGAGWANVPVLNLLM-------GVPLKVSVGTSKFLLSITDTS 218

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +   +   G +   +    I  L + +VV   +++     F+     I     G   L +
Sbjct: 219 AAWVYLNQGCVIPLMAIPSIVGLMLGSVVGVRLLAKAKPKFIRYMVIIVLFFSGAKALMK 278



 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 94/283 (33%), Gaps = 48/283 (16%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++   F+ G ++ + GVGGG++ VP++S  F                  L V    ++
Sbjct: 11  LALLGFCFILGIIAVMAGVGGGVLFVPLVSGFFPFHLDFVRGAG-------LLVALAGAL 63

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +     R    N+++      +     +V +++   +  + +        L + +L+L 
Sbjct: 64  AAGPGLLRRNFANLRLALPVALIASACAIVGAMLGLALPTNIVQTCLGAVILGIAVLLLV 123

Query: 144 RDRLYCERKFPDNYVKYIWG----------------------------MVTGFLSGALGV 175
                       + V    G                            +  G ++G  G+
Sbjct: 124 SKNSVRPVVTKQDAVGLALGMNGVFLEPSTGEVVEWKTHRTFLGLLFFIAIGIMAGMFGL 183

Query: 176 GGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           G G     ++ L  G  +  +  TS  + ++    A  V +  G  +  +         I
Sbjct: 184 GAGWANVPVLNLLMGVPLKVSVGTSKFLLSITDTSAAWVYLNQGCVIPLMA--------I 235

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            +++ ++  S+    +  +L      K++     +++F +   
Sbjct: 236 PSIVGLMLGSV----VGVRLLAKAKPKFIRYMVIIVLFFSGAK 274


>gi|270665395|ref|ZP_06222435.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
 gi|270316846|gb|EFA28570.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
          Length = 117

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 7/95 (7%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I ++++    +  +S +FG+GGG++MVP+L   F        + + V   TSL ++  
Sbjct: 4   STIFILLICGICTNMVSAIFGIGGGVLMVPILRTLF------PELPIQVISATSLTIVMC 57

Query: 81  TSVMS-FMEHRRHGTINMKILKDWIFVLPITTVVT 114
           T++++    H++   I+   +  W   + I   + 
Sbjct: 58  TALINLLFFHKQKIKIDYINMILWSIAMVIGVQIG 92


>gi|92115876|ref|YP_575605.1| hypothetical protein Nham_0245 [Nitrobacter hamburgensis X14]
 gi|91798770|gb|ABE61145.1| protein of unknown function DUF81 [Nitrobacter hamburgensis X14]
          Length = 308

 Score = 45.1 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 8/114 (7%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + LI+      G +SG+FG+GGG +M P+L            I   V
Sbjct: 1   MQLYLPIADLPVNVFLILAMGAAVGFVSGMFGIGGGFLMTPLLIFV--------GIAPAV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           A+ T    IA +S    + + R   I+  +    +      T++     + +  
Sbjct: 53  AVATVASHIAASSFSGALSYWRKRAIDPILALVLLSGAMAGTMLGVWTFTLLRS 106


>gi|307266577|ref|ZP_07548109.1| protein of unknown function DUF81 [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|326390105|ref|ZP_08211666.1| protein of unknown function DUF81 [Thermoanaerobacter ethanolicus
           JW 200]
 gi|306918431|gb|EFN48673.1| protein of unknown function DUF81 [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|325993753|gb|EGD52184.1| protein of unknown function DUF81 [Thermoanaerobacter ethanolicus
           JW 200]
          Length = 117

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 37/84 (44%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
             + I      H+A   +L    PT++++ + H +   I  KI+   I    I + V ++
Sbjct: 26  PALTIFTGTEQHIAQSVNLFSFIPTAIIALIYHFKSKNIKYKIILLIIIGGMIGSFVGAI 85

Query: 117 MISHVDKSFLNKAFAIFCLLMGIL 140
           + +      L K FA+F   MGI 
Sbjct: 86  IAAITKAFILKKIFAVFLFCMGIY 109


>gi|297624354|ref|YP_003705788.1| hypothetical protein Trad_2132 [Truepera radiovictrix DSM 17093]
 gi|297165534|gb|ADI15245.1| protein of unknown function DUF81 [Truepera radiovictrix DSM 17093]
          Length = 249

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 73/192 (38%), Gaps = 17/192 (8%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           VA+ T++  +   SV   +     G  + + L  ++ +  +++ + + +++ +    ++ 
Sbjct: 26  VAVATNMLALTFMSVGGALPFVGKGVFDRRRLPLFVLLTLLSSAIGAYLVTLIPAEAMSF 85

Query: 129 AFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGV--GGG---IFTNL 183
             A F L +   ++   R     +    +     G +  FL G  G    GG   + T  
Sbjct: 86  LIAFFMLGVATFVVLNRRAGVTPRQKVGFGAAFAGYLLTFLLGVYGGFFSGGYVTMLTTT 145

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
            +  +G +  +A AT+  ++   +  A  V +++              ++    + +   
Sbjct: 146 FVALFGMTFLQAIATTKIINFFSSLVATGVYVWAEL------------IDWPLGVALSVT 193

Query: 244 SILITPLATKLS 255
             +   +  KL+
Sbjct: 194 MFVGAAIGGKLA 205


>gi|126454973|ref|YP_001067418.1| hypothetical protein BURPS1106A_3180 [Burkholderia pseudomallei
           1106a]
 gi|126228615|gb|ABN92155.1| putative membrane protein [Burkholderia pseudomallei 1106a]
          Length = 262

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 56/269 (20%), Positives = 88/269 (32%), Gaps = 33/269 (12%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L  ++    G L GL GVGGG +M P+L   F       ++    A+GT L   A T   
Sbjct: 7   LYSLSGLFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAALTKAT 59

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI------SHVDKSFLNKAFAIFCLL-- 136
               H   GT+  +I             +T   +      S      +        LL  
Sbjct: 60  GTFVHGLKGTVEWRITGRLAAGSVPAAAITLWFLHAHGMHSQETSRMIQFVLGAALLLTS 119

Query: 137 --------MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
                   +     KR R              + G V G L     VG G     ++L  
Sbjct: 120 LSLLLRPQLAAFAAKRTRALPPNPTRTLAATVLTGAVLGVLVSLTSVGAGAIGVTVLLL- 178

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
              +Y A +T+  V + IA    L        + G+  W LG V+   ++ +L  S+   
Sbjct: 179 ---LYPALSTTRIVGSDIAHAVPLTL------VAGVGHWMLGSVDWAMLVSLLIGSVPGI 229

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + + LS    +  L    +  +      
Sbjct: 230 VVGSHLSARAPEGLLRRVLAATLVAVGVK 258



 Score = 43.1 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 49/118 (41%), Gaps = 6/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  L  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 151 VLTGAVLGVLVSLTSVGAGAIGVTVLLLLY------PALSTTRIVGSDIAHAVPLTLVAG 204

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + H   G+++  +L   +       VV S + +   +  L +  A   + +G+ ++  
Sbjct: 205 VGHWMLGSVDWAMLVSLLIGSVPGIVVGSHLSARAPEGLLRRVLAATLVAVGVKLVLS 262


>gi|116072209|ref|ZP_01469476.1| hypothetical protein BL107_10496 [Synechococcus sp. BL107]
 gi|116064731|gb|EAU70490.1| hypothetical protein BL107_10496 [Synechococcus sp. BL107]
          Length = 255

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 65/176 (36%), Gaps = 11/176 (6%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P+L            +  H A+ TS   I PT++   + H R G I ++           
Sbjct: 34  PLLLWL--------DLPAHQALATSSFAIVPTALAGTIIHLRGGRIPLRPAAGIGVAAFA 85

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM--VTG 167
           + ++   +        L     +  +++   + +R             V ++ G+  + G
Sbjct: 86  SALLFGGLADRAAGWMLLAMQTVLYVVLAFCVRERPATDDSTDEVSTPVSWLAGVGCIAG 145

Query: 168 FLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           + +G LG+GGG+    LM       I++A   S       A  A L  ++ G G+ 
Sbjct: 146 WTAGMLGLGGGLVMVPLMSGPLSVPIHQAVRLSTVAVLCSASAASLQFVHEGRGIP 201


>gi|319762498|ref|YP_004126435.1| hypothetical protein Alide_1796 [Alicycliphilus denitrificans BC]
 gi|330825651|ref|YP_004388954.1| hypothetical protein Alide2_3096 [Alicycliphilus denitrificans
           K601]
 gi|317117059|gb|ADU99547.1| protein of unknown function DUF81 [Alicycliphilus denitrificans BC]
 gi|329311023|gb|AEB85438.1| protein of unknown function DUF81 [Alicycliphilus denitrificans
           K601]
          Length = 267

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 92/271 (33%), Gaps = 44/271 (16%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            I+A F  G + GL GVGGG +M PVL   F        +  ++A+GT L   A T +  
Sbjct: 6   FILAGFAVGLIVGLTGVGGGSLMTPVLIFVF-------GVKPNLAVGTDLLFAAFTKLGG 58

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS-------------------FL 126
            +   R   +  +++           ++    + H+                        
Sbjct: 59  TLGLARQRLVPWRVVAQLCAGSIPAALLALWALRHLGPDSAAAQRLMTTTLGAALLLTAA 118

Query: 127 NKAFAIFCL----LMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-- 180
              + +              +R +     +     +  + G V G L     VG G    
Sbjct: 119 ATFYKVLVFSPERAAAEAARRRAQSADATRPRHWSLPVLLGAVIGMLVTFTSVGAGAIGV 178

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
           + LL++F    + +  A     +  +              + GL   SLG VN   + ++
Sbjct: 179 SVLLLVFPHLPLPRIIAADIAYAVPLTL------------VAGLGHASLGSVNWPLLGLL 226

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           L  S+    L ++L     ++ +    S+++
Sbjct: 227 LAGSLPGIWLGSRLVARTPERLIRSVLSVLL 257



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 44/117 (37%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L     VG G + V VL   F  + +   I   +A         P ++++ 
Sbjct: 156 VLLGAVIGMLVTFTSVGAGAIGVSVLLLVFPHLPLPRIIAADIAYA------VPLTLVAG 209

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + H   G++N  +L   +        + S +++   +  +    ++     G  ++ 
Sbjct: 210 LGHASLGSVNWPLLGLLLAGSLPGIWLGSRLVARTPERLIRSVLSVLLAWAGAKLVL 266


>gi|302545580|ref|ZP_07297922.1| putative integral membrane protein [Streptomyces hygroscopicus ATCC
           53653]
 gi|302463198|gb|EFL26291.1| putative integral membrane protein [Streptomyces himastatinicus
           ATCC 53653]
          Length = 250

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 68/193 (35%), Gaps = 20/193 (10%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+  +    +  + + + R   ++++I         I ++  + + S +D + L    
Sbjct: 40  LGTNKAIAICGTTGAAVTYTRKAPVDVRIAVRIGIAAAIGSLAGASLASGIDSAVLRPLI 99

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVK-------YIWGMVTGFLSGALGVGGGIFTNL 183
            +  L +   +L R              +          G+  GF  G +G G G F  +
Sbjct: 100 MVVLLAVLAFVLLRPTFGSAPALTGPLSRHRVLAAVLGVGLGIGFYDGLIGPGTGTFLVI 159

Query: 184 LMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            +    G  +  ++AT+  V+      AL+               S G V  G   ++  
Sbjct: 160 ALAATLGMDLVTSSATAKVVNVCTNVGALVTF------------GSQGTVLWGLAALLAC 207

Query: 243 ISILITPLATKLS 255
            ++    +  +++
Sbjct: 208 FNLAGGMVGARMA 220


>gi|311695095|gb|ADP97968.1| membrane protein containing DUF81 [marine bacterium HP15]
          Length = 248

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 47/131 (35%), Gaps = 9/131 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++    ++G ++ L   GG ++ +P+L            +   VA GT+   I   S
Sbjct: 6   IVALLSIGGIAGFINVL-SAGGSMLTLPLLMFL--------GLPPQVANGTNRVAITLQS 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +     R G  N+ +         + ++V + + + V  +          +   + ML
Sbjct: 57  ITAVGSFYRMGHGNLVVSLHLAIPAVLGSLVGAWVATWVSDAVFEWVLVSAMIGASVFML 116

Query: 143 KRDRLYCERKF 153
               +   R  
Sbjct: 117 LPQPVLNTRPL 127


>gi|296284955|ref|ZP_06862953.1| hypothetical protein CbatJ_15111 [Citromicrobium bathyomarinum
           JL354]
          Length = 272

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 53/265 (20%), Positives = 100/265 (37%), Gaps = 25/265 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +I + +++  + G + GL G GG ++ VP+L  A  +         H+A+GT+   +A
Sbjct: 15  LAHILITLLSGGVIGFVLGLVGGGGSILAVPLLVYAVGMK------SPHMAIGTAAVAVA 68

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +++  + H R G +  +    +         + +     VD   L   F    +++ +
Sbjct: 69  LNALVGLIGHARSGNVRWQCALSFALAGSAGAALGAEAGKAVDGESLLGLFGGLMVVVAL 128

Query: 140 LMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGA 190
           LML+          R+  E            G  TG L+G  G+GGG      ++F    
Sbjct: 129 LMLRGRSAAENPLVRMTRENAKSMLSRILPIGFGTGLLAGFFGIGGGFLIVPGLVFATAM 188

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
            +  A  +S    +            SG     +  W         V   +  S+L    
Sbjct: 189 PLSLAIGSSLVAVSAFGITTAGSYALSGMVDWTIVAW--------LVAGGIGGSVLGRGA 240

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTS 275
             KL+    K+ L IGF++++    
Sbjct: 241 GAKLATH--KRALEIGFAVLVAAVG 263



 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 56/122 (45%), Gaps = 9/122 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I+   F +G L+G FG+GGG ++VP L  A        ++ + +A+G+SL  ++   + +
Sbjct: 156 ILPIGFGTGLLAGFFGIGGGFLIVPGLVFA-------TAMPLSLAIGSSLVAVSAFGITT 208

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK--SFLNKAFAIFCLLMGILMLK 143
              +   G ++  I+   +      +V+     + +      L   FA+    +G+ ++ 
Sbjct: 209 AGSYALSGMVDWTIVAWLVAGGIGGSVLGRGAGAKLATHKRALEIGFAVLVAAVGVWVIV 268

Query: 144 RD 145
           + 
Sbjct: 269 KS 270


>gi|218778985|ref|YP_002430303.1| hypothetical protein Dalk_1132 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760369|gb|ACL02835.1| conserved hypothetical protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 121

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 43/124 (34%), Gaps = 8/124 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              +++    + G  +   G+GGG ++VP+L                 A+GTS   I   
Sbjct: 6   LYAMLVAFGVVVGVGASFSGLGGGFLIVPLLLFM--------KYEAQQAVGTSFMAILVI 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  + + H +   ++            I   +   ++  V  +   K FA   + +   +
Sbjct: 58  SFSAIIAHNKLSNVDYVAGIMLGIGGIIGAQIGPRLLEGVSTASFKKIFAGILVGLAAYL 117

Query: 142 LKRD 145
             + 
Sbjct: 118 FFQK 121


>gi|126650547|ref|ZP_01722770.1| hypothetical protein BB14905_08153 [Bacillus sp. B14905]
 gi|126592703|gb|EAZ86702.1| hypothetical protein BB14905_08153 [Bacillus sp. B14905]
          Length = 266

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 95/268 (35%), Gaps = 22/268 (8%)

Query: 4   LLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD 63
           LL +F +++ L           ++    ++  +  L G GGGL+ +P +           
Sbjct: 5   LLVSFFVILSLLGLYYAKISLTLVCIGIIAAFIGTLAG-GGGLITLPAMMLV-------- 55

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            I +  ++ T+      +++ S      H  +++K + ++I +  I  V  +L+   + +
Sbjct: 56  GIPIQTSIATNKFSTGISALSSIFYLLYHKELHLKAILNYIAIAGIGGVGGALLAVSLSE 115

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTN 182
             +N    I  +   ++ LK           ++ +  +W         G  G G   F+ 
Sbjct: 116 QTMNFTACILLIFALVVTLKNKAWTDTVNHTEHTMSSLWQPFFIAMYDGGFGPGSSTFSI 175

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           L  L    +  KA   +  +       A +V             +  GF+     + +  
Sbjct: 176 LYYLRCQHTYIKAVQLTRALLFGSCTGAFIVF------------YQTGFIQWHYAIAMAL 223

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMI 270
            SI+ + L   +   I  K   +   +I
Sbjct: 224 GSIIGSQLGLLVLPRIPIKVAKLLLPVI 251


>gi|332654750|ref|ZP_08420492.1| inner membrane protein YfcA [Ruminococcaceae bacterium D16]
 gi|332516093|gb|EGJ45701.1| inner membrane protein YfcA [Ruminococcaceae bacterium D16]
          Length = 240

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 82/242 (33%), Gaps = 27/242 (11%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +P     + L G+      H A  T+       ++++     + G +++     
Sbjct: 11  GGGLITLPA----YLLAGLPP----HAASATNKCGNVWGTLLATYRFLKRGEVHLFSAVC 62

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF------PDN 156
                 I     + +   + + +L     I   +M + +L +     E            
Sbjct: 63  GGVGALIGAWAGAKLNMIMPERYLYYLMLIIVPVMAVFLLFKREFGTEDHSHELSPRRLL 122

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRI 215
            +    G+V G   G  G G G F  L         +  A+  +   ++     +L+   
Sbjct: 123 ILSLGIGLVMGCYDGFFGPGAGTFLMLAFTGLCKFDLLTASGNTKVANSASNVASLVTFA 182

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
            +G  +     WS+G   I A +  +        + + L+   G K +   F +++   +
Sbjct: 183 LAGQVV-----WSVG---IPAAICGIAGGY----VGSGLALKNGAKVIRPMFFVVLALLT 230

Query: 276 FV 277
             
Sbjct: 231 IR 232


>gi|194291185|ref|YP_002007092.1| hypothetical protein RALTA_A3111 [Cupriavidus taiwanensis LMG
           19424]
 gi|193225020|emb|CAQ71031.1| conserved hypothetical protein, DUF81; putative membrane protein
           [Cupriavidus taiwanensis LMG 19424]
          Length = 253

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 86/243 (35%), Gaps = 24/243 (9%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGLV +P L  A+       ++     +GT+       +  + + + R   I       
Sbjct: 23  GGGLVQIPALFSAY------PNLAPATLLGTNKVGSIAGTASAALRYGRSVRIYWGATAP 76

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP-----DNY 157
            +      ++  +  ++ +    + KA     +++ +  + +  L  E         +  
Sbjct: 77  AVVAAFACSMAGAWALTMIPAEPMRKALPFVLVVLLVYTVAKKDLGAEHAPTLTGWGERG 136

Query: 158 VKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
              + G V GF  G  G G G     + +  +G     A A++  V+      ALL+   
Sbjct: 137 AALLGGAVLGFYDGVFGPGTGSFLMIMFVRVFGYDFLHAAASTKLVNLATNLAALLLLA- 195

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                      S G +     L++   ++  + + +KL+   G  ++   F +++     
Sbjct: 196 -----------SKGHIWWQLGLVMAVANVAGSQVGSKLALRHGSAFVRKVFIVVVSALIL 244

Query: 277 VFA 279
             A
Sbjct: 245 KTA 247


>gi|261879093|ref|ZP_06005520.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270334275|gb|EFA45061.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 240

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 65/154 (42%), Gaps = 15/154 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++I+   L+G LS   G GGG++++PV++      GI+ ++ +      ++  +   + 
Sbjct: 3   IVLIIVGLLAGMLSSSIGFGGGMLLLPVVTA---FYGIEVAVPV-----CTIAQLLSNAS 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S         I  K    ++      T + +   S   K+ +     +  +L  +  L+
Sbjct: 55  RSIFG---WKDIEWKKTLWFLLPSIPLTALGAYGFSVAPKNIMTCVVGVALILFAVRKLR 111

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
               + +         ++ G VTGF++G LG+ G
Sbjct: 112 GKLRFPQ----GPLTMFVGGSVTGFINGMLGISG 141


>gi|210134883|ref|YP_002301322.1| integral membrane protein [Helicobacter pylori P12]
 gi|210132851|gb|ACJ07842.1| integral membrane protein [Helicobacter pylori P12]
          Length = 255

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 73/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  +A
Sbjct: 1   MDVYALYIAIGLFTGILSGIFGI--------GGGLIIVPIMLATGHSFEESIGISILQMA 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFSLGLLIGAGGLIGASFSGFILKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVLKPQKKDFIADNKRYHLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       +Y 
Sbjct: 173 KCVALGLFFILFSSISGAFSLMYH 196


>gi|166710099|ref|ZP_02241306.1| hypothetical protein Xoryp_01100 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 259

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 68/199 (34%), Gaps = 13/199 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++  +F++G +    G GGGL+ +P L                + +GT+       +
Sbjct: 11  LPWLLCIAFVAGLVDAAVG-GGGLIQLPGLFATLPQQ------APSLILGTNKFSAMFGT 63

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S   + R+     + +          + + +  +S + K  +     +  + M I  L
Sbjct: 64  GTSAWRYARNVRFPWRPVLYATAAAFTFSFLGATAVSLMPKQAVRPLILLLLMAMLIYTL 123

Query: 143 KRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKAT 196
            +       +      +        G   GF  G  G G G     L + F+G    +A+
Sbjct: 124 IKKDFGALHRPRQIGRRELATALAMGAAIGFYDGFFGPGTGSFLIFLFIRFFGLDFLRAS 183

Query: 197 ATSAGVSALIAFPALLVRI 215
           A +  V+      AL   +
Sbjct: 184 AAAKVVNLATNLAALSFFL 202


>gi|260778973|ref|ZP_05887865.1| putative integral membrane protein [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605137|gb|EEX31432.1| putative integral membrane protein [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 249

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 14/208 (6%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A    L ++      +  +H R    +  +LK  +    +   +    +S   ++ L   
Sbjct: 48  AAAILLPILVVMDAFAVKQHYR--NADYAVLKTMLPGAILGVGLAWAFLSVTPETGLKLT 105

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
             +  L   +      R    +  P     + W  ++GF S A+  GGG  +  L+    
Sbjct: 106 IGLLSLGFCLQHWLSGRSSTRK--PGTISAWFWSSLSGFSSTAIHAGGGPASIYLLPLRL 163

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             I    AT A + A+I    L+     G              N+   L ++P++ +   
Sbjct: 164 EKIPL-IATMAVLFAIINLFKLIPYAALGEFDKT---------NLLTALALIPLAPIGVK 213

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L   L + + ++ +     + +F +   
Sbjct: 214 LGVFLLHRVSQERIYQLCYLFLFLSGMK 241


>gi|210634094|ref|ZP_03297982.1| hypothetical protein COLSTE_01900 [Collinsella stercoris DSM 13279]
 gi|210158945|gb|EEA89916.1| hypothetical protein COLSTE_01900 [Collinsella stercoris DSM 13279]
          Length = 266

 Score = 45.1 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 88/260 (33%), Gaps = 23/260 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +    F S  +  + G+GGG+++ PVL      +G      ++   G ++  +   SV
Sbjct: 6   IAVFAVCFFSSIIGAVCGIGGGVIIKPVL----DALGAFPVSTINFLSGCTVLSMTAYSV 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF--------LNKAFAIFCL 135
           +          I+ K          I  +V   + S V+  F        +  A  +   
Sbjct: 62  LRSRISGAS-QIDFKTATPLAIGAAIGGLVGKDLFSLVEGLFDTPNTAGAVQAATLMVIT 120

Query: 136 LMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT-NLLMLFYGASIYK 194
           +  ++          ++        + G++ G +S  LG+GGG     +L  F+     +
Sbjct: 121 IGTLVYTINKDKVATKRVSSAVACALIGLILGIMSSFLGIGGGPINLVVLYYFFSMETKE 180

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A   S  +       + +  + +           L  V++  ++ ++   I        +
Sbjct: 181 AAQNSLYIILFSQAASTIRSVLT---------MDLAQVSVALIIGMVVCGICGGIAGRSI 231

Query: 255 SYMIGKKYLTIGFSMIMFTT 274
           +  I  + +   F  +M   
Sbjct: 232 NKHIDSERVDKLFIGLMVVI 251


>gi|257875091|ref|ZP_05654744.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
 gi|257809257|gb|EEV38077.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
          Length = 258

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 91/265 (34%), Gaps = 30/265 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  +   L+  +  + G+GGG+++ P     F  +G      +     T++  ++  S 
Sbjct: 4   LIYFLVIVLANAVGAVSGMGGGVLIKP----IFDFIGAHSVAAISFYSATAVFTMSIVST 59

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA----------FAIF 133
                  R      KI       +    V+  ++ +   +  L               + 
Sbjct: 60  A------RQLASGWKINWSIALWVSGGAVLGGVLGNVAFERLLLVFRDDKMVQLIQILVT 113

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASI 192
            L +    L     +              G++ GFL+  LG+GGG     LLML +   I
Sbjct: 114 VLTLLFAFLYTKYNWRGFALEKVGWYAACGLILGFLASLLGIGGGPINVSLLMLLFAMPI 173

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +AT  S           +L   +S            G  ++  +  ++P +I+   L  
Sbjct: 174 KEATIYSICTIFFSQLAKILTIAFSTG---------FGAYDLQILWFVIPAAIVGGLLGA 224

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFV 277
           K S ++  + +T+ F  ++     +
Sbjct: 225 KASNVLSPQRVTLVFQTVIVLVLLI 249



 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 55/144 (38%), Gaps = 10/144 (6%)

Query: 4   LLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD 63
           LL+ F    +  +   ++ +        + G L+ L G+GGG + V +L   F       
Sbjct: 117 LLFAFLYTKYNWRGFALEKVGWYAACGLILGFLASLLGIGGGPINVSLLMLLF------- 169

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRH---GTINMKILKDWIFVLPITTVVTSLMISH 120
           ++ +  A   S+  I  + +   +        G  +++IL   I    +  ++ +   + 
Sbjct: 170 AMPIKEATIYSICTIFFSQLAKILTIAFSTGFGAYDLQILWFVIPAAIVGGLLGAKASNV 229

Query: 121 VDKSFLNKAFAIFCLLMGILMLKR 144
           +    +   F    +L+ ++ L  
Sbjct: 230 LSPQRVTLVFQTVIVLVLLINLYN 253


>gi|242314815|ref|ZP_04813831.1| putative membrane protein [Burkholderia pseudomallei 1106b]
 gi|242138054|gb|EES24456.1| putative membrane protein [Burkholderia pseudomallei 1106b]
          Length = 264

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 56/269 (20%), Positives = 88/269 (32%), Gaps = 33/269 (12%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L  ++    G L GL GVGGG +M P+L   F       ++    A+GT L   A T   
Sbjct: 9   LYSLSGLFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAALTKAT 61

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI------SHVDKSFLNKAFAIFCLL-- 136
               H   GT+  +I             +T   +      S      +        LL  
Sbjct: 62  GTFVHGLKGTVEWRITGRLAAGSVPAAAITLWFLHAHGMHSQETSRMIQFVLGAALLLTS 121

Query: 137 --------MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
                   +     KR R              + G V G L     VG G     ++L  
Sbjct: 122 LSLLLRPQLAAFAAKRTRALPPNPTRTLAATVLTGAVLGVLVSLTSVGAGAIGVTVLLL- 180

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
              +Y A +T+  V + IA    L        + G+  W LG V+   ++ +L  S+   
Sbjct: 181 ---LYPALSTTRIVGSDIAHAVPLTL------VAGVGHWMLGSVDWAMLVSLLIGSVPGI 231

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + + LS    +  L    +  +      
Sbjct: 232 VVGSHLSARAPEGLLRRVLAATLVAVGVK 260



 Score = 43.1 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 49/118 (41%), Gaps = 6/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  L  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 153 VLTGAVLGVLVSLTSVGAGAIGVTVLLLLY------PALSTTRIVGSDIAHAVPLTLVAG 206

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + H   G+++  +L   +       VV S + +   +  L +  A   + +G+ ++  
Sbjct: 207 VGHWMLGSVDWAMLVSLLIGSVPGIVVGSHLSARAPEGLLRRVLAATLVAVGVKLVLS 264


>gi|78049954|ref|YP_366129.1| hypothetical protein XCV4398 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78038384|emb|CAJ26129.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 269

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 72/211 (34%), Gaps = 13/211 (6%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  + +   +  ++  +F++G +    G GGGL+ +P L                + +GT
Sbjct: 2   VLLELIPTELPWLLCIAFVAGLVDAAVG-GGGLIQLPGLFATLPQQ------APSLILGT 54

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +       +  S   + R      + +          + + +  +S + +  +     + 
Sbjct: 55  NKFSAMFGTAASAWRYARTVRFPWRPVLYATAAAFTFSFLGATAVSLMPRQAVRPLILLL 114

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVG-GGIFTNLLMLF 187
            + M I  L +       +      +        G   GF  G  G G G     L + F
Sbjct: 115 LIAMLIYTLIKKDFGALHRPRQIGRRELATALAMGAAIGFYDGFFGPGTGSFLIFLFIRF 174

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSG 218
           +G    +A+A +  V+      AL   + SG
Sbjct: 175 FGLDFLRASAAAKVVNLATNLAALSFFLPSG 205


>gi|108563085|ref|YP_627401.1| hypothetical protein HPAG1_0660 [Helicobacter pylori HPAG1]
 gi|107836858|gb|ABF84727.1| conserved hypothetical integral membrane protein [Helicobacter
           pylori HPAG1]
          Length = 255

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 73/204 (35%), Gaps = 14/204 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  +A
Sbjct: 1   MDIYALYIAIGLFTGILSGIFGI--------GGGLIIVPIMLATGHSFEESIGISILQMA 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +S +  + + +  +++  +         I    +  ++  V    L   FA+  +   I
Sbjct: 53  LSSFVGSVLNFKKKSLDFFLGLLIGAGGLIGASFSGFVLKIVSSKILMVIFALLVVYSMI 112

Query: 140 LMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIY 193
             + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G    
Sbjct: 113 QFVVKPQKKDLIADTKRYPLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDSK 172

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           K  A         +       +Y 
Sbjct: 173 KCVALGLFFILFSSISGAFSLMYH 196


>gi|218514211|ref|ZP_03511051.1| putative permease protein [Rhizobium etli 8C-3]
          Length = 234

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 8/124 (6%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           ++   L V   K  +   +  I+   F  G L+ + GVGGG +MVP +    +       
Sbjct: 84  VHKLPLKVRFKKSKIFLSVIPIVALGFAIGILTSVMGVGGGFIMVPAMIYLLR------- 136

Query: 65  ICMHVAMGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           I  +V +GTSL  I   T+  + ++   + ++++ +    +    I       +   +  
Sbjct: 137 IPTNVVVGTSLYQIIFVTAYTTIVQAATNFSVDIVLAFILMVAGVIGAQYGVRVGQKLRG 196

Query: 124 SFLN 127
             L 
Sbjct: 197 EQLR 200



 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 12/126 (9%)

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATAT 198
            +  + R    + F         G   G L+  +GVGGG      M++           T
Sbjct: 86  KLPLKVRFKKSKIFLSVIPIVALGFAIGILTSVMGVGGGFIMVPAMIYLLRIPTNVVVGT 145

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S      +     +V+  + +            V+I    I++   ++      ++   +
Sbjct: 146 SLYQIIFVTAYTTIVQAATNFS-----------VDIVLAFILMVAGVIGAQYGVRVGQKL 194

Query: 259 GKKYLT 264
             + L 
Sbjct: 195 RGEQLR 200


>gi|191637196|ref|YP_001986362.1| hypothetical protein LCABL_03780 [Lactobacillus casei BL23]
 gi|190711498|emb|CAQ65504.1| Putative uncharacterized protein [Lactobacillus casei BL23]
 gi|327381235|gb|AEA52711.1| hypothetical protein LC2W_0376 [Lactobacillus casei LC2W]
 gi|327384405|gb|AEA55879.1| hypothetical protein LCBD_0380 [Lactobacillus casei BD-II]
          Length = 259

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 91/258 (35%), Gaps = 21/258 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L +V   L+ T+  + G+GGG+++ P L         +    + +   +S+ V     
Sbjct: 3   VILYVVVILLANTIGAISGMGGGVIIKPAL------QIFNWDSVLTINFYSSVAVFTMAV 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-----LNKAFAIFCLLM 137
             ++ + +    IN   +        +  +   +              +     +  + +
Sbjct: 57  SSTWKQIKAKNAINKTCVVGLSLGSILGGIAGDISFGWFYSRVGDDISVAAQMLLVIVSL 116

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKAT 196
            + ++        R      +    G   G+L+  LG+GGG       +  +G  I +AT
Sbjct: 117 IVSLILSSGRLQSRHLTGMPMMIGAGFGLGWLATVLGIGGGPINIACFLFLFGFGIRQAT 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S           +   ++SG  L   P           V+ I+  ++    L   +S 
Sbjct: 177 IYSIVTIFFSQAAKIAQALFSGSVLMIDPFL---------VVAIMVAALFGGWLGAVISN 227

Query: 257 MIGKKYLTIGFSMIMFTT 274
            I +K++ + +++++   
Sbjct: 228 HITEKWILMLYNLVIVFV 245


>gi|148242676|ref|YP_001227833.1| hypothetical protein SynRCC307_1577 [Synechococcus sp. RCC307]
 gi|147850986|emb|CAK28480.1| Uncharacterized conserved membrane protein [Synechococcus sp.
           RCC307]
          Length = 255

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 57/169 (33%), Gaps = 9/169 (5%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
               +G+D     H A+ TS   I PT+      H R G + ++           + +  
Sbjct: 32  LLLALGLDP----HQALATSTLAIVPTTAAGSWAHWRQGRLPLQPALVIALAALASGLGF 87

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLS---- 170
           +L+   +    L    A+   L+ + +  R +        D     +   + G ++    
Sbjct: 88  ALVGKVLSGWHLLAVQALVYALVALSVRPRQQSATAVDSSDPSPALLPLALVGCIAGLCG 147

Query: 171 -GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
                 GG +   L++ +    +Y A   S     L +  A  + +  G
Sbjct: 148 GLLGLGGGLVMVPLMVAWLRIPMYLAIRLSTVAVLLASAGAGSLFVLEG 196


>gi|153956248|ref|YP_001397013.1| hypothetical protein CKL_3652 [Clostridium kluyveri DSM 555]
 gi|146349106|gb|EDK35642.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
          Length = 110

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 70  AMGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           A GTSL ++ P   +++F+++ +   +N++        L I +V  + +   +  + L K
Sbjct: 12  AQGTSLAILLPPAGILAFIDYYKRDQVNLQAGILICMFLIIGSVFGAKISHIISINILRK 71

Query: 129 AFAIFCLLMGILMLKRDR 146
            F I  +L+ I ++  + 
Sbjct: 72  LFGILMILISIKLILENN 89


>gi|255525922|ref|ZP_05392849.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
 gi|255510416|gb|EET86729.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
          Length = 119

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 38/78 (48%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            +  H A  TSL  IAP +++S + +  +G +N+ +         +   + S ++ HV+ 
Sbjct: 38  GLSQHKAQATSLAAIAPLALISAIVYNSYGNLNIYLACLLSIGGMVGAYIGSSLMPHVNA 97

Query: 124 SFLNKAFAIFCLLMGILM 141
             L +  A+ C++  + M
Sbjct: 98  VILKRILALLCIITALKM 115


>gi|70606163|ref|YP_255033.1| hypothetical protein Saci_0324 [Sulfolobus acidocaldarius DSM 639]
 gi|68566811|gb|AAY79740.1| hypothetical membrane protein [Sulfolobus acidocaldarius DSM 639]
          Length = 283

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 89/252 (35%), Gaps = 39/252 (15%)

Query: 49  VPVLSKAFQLMGIDDSI-----CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDW 103
           VP+L     L     S        H+ +GTS   +   + ++   H R G +  K+ +  
Sbjct: 40  VPLLLYFVGLGNDSSSFGNYSNITHLVLGTSALAVGLNAYINSFIHWRKGNV--KVFEGV 97

Query: 104 IFVLPITTVVTSLMISHV----DKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK 159
           +F +P   V+ S++ ++       + +   F I  +L+G+ M+K        +   +   
Sbjct: 98  VFTIP--GVIGSILGAYFGYLTTGNLILIMFGIVMILIGLRMIKSKCKEGSNETKGSGDT 155

Query: 160 YIW-------------GMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSAL 205
            +              G + G  SG LG+GGG      +LF    SI  A  TS      
Sbjct: 156 GVVKSKDRINIRIIYTGFLVGLASGFLGIGGGFLIVPALLFSTSMSIISAIGTSLISVGT 215

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
                 L               S G ++    LI+L   +    + T L+    +  L  
Sbjct: 216 FGLSTALTYA------------SYGEIDYILSLILLAGGVGGGYIGTLLASKSPRSTLRK 263

Query: 266 GFSMIMFTTSFV 277
            F +++   +  
Sbjct: 264 VFGVVLIVVAIY 275



 Score = 42.8 bits (100), Expect = 0.059,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 7/120 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           II   FL G  SG  G+GGG ++VP L           S+ +  A+GTSL  +    + +
Sbjct: 168 IIYTGFLVGLASGFLGIGGGFLIVPALLF-------STSMSIISAIGTSLISVGTFGLST 220

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            + +  +G I+  +    +        + +L+ S   +S L K F +  +++ I ++ R+
Sbjct: 221 ALTYASYGEIDYILSLILLAGGVGGGYIGTLLASKSPRSTLRKVFGVVLIVVAIYIIYRN 280


>gi|323701388|ref|ZP_08113062.1| protein of unknown function DUF81 [Desulfotomaculum nigrificans DSM
           574]
 gi|323533647|gb|EGB23512.1| protein of unknown function DUF81 [Desulfotomaculum nigrificans DSM
           574]
          Length = 433

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 98/292 (33%), Gaps = 68/292 (23%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +     +G ++G  G GGG V+ P L            +   +A+GT    I   ++M  
Sbjct: 80  MAIGVCAGLITGCIGAGGGFVITPALMSL--------GVKGILAVGTDQFHIFAKAIMGT 131

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-------DKSFLNKAFAIFCLLMGI 139
           + H++ G I++ +   ++    I       +   +           ++  +     L+G 
Sbjct: 132 VMHKKLGNISVSLAIAFLVGSGIGVTGGGALNRALFNLNPVFSDFVISAVYVAILGLLGF 191

Query: 140 L-----------------------------------------MLKRDRLYCERKFPDNYV 158
                                                     +     +    +    + 
Sbjct: 192 YSSYDFWKNRHSIGKSKGDAHGGTVELTALAKKLQSIKLAPMITFDQDIVPGGRRISAWF 251

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             + G VTGFL+  +GVGGG  T  + ++             GVS+       +++I   
Sbjct: 252 VALCGCVTGFLASIMGVGGGFVTFPMFVY-----------GLGVSSFTTVGTDILQIIFT 300

Query: 219 WGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            G + +  +++ G++     + +L  S+L   +    + ++   Y+   +++
Sbjct: 301 AGYSSIMQYAIYGYIFYTLAMGMLVGSLLGIQIGAATTKVVPGIYIRAFYAI 352



 Score = 44.3 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 8/110 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS- 82
             + +   ++G L+ + GVGGG V  P+      +            +GT +  I  T+ 
Sbjct: 250 WFVALCGCVTGFLASIMGVGGGFVTFPMFVYGLGVSSFTT-------VGTDILQIIFTAG 302

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
             S M++  +G I   +    +    +   + +     V   ++   +AI
Sbjct: 303 YSSIMQYAIYGYIFYTLAMGMLVGSLLGIQIGAATTKVVPGIYIRAFYAI 352


>gi|154246829|ref|YP_001417787.1| hypothetical protein Xaut_2893 [Xanthobacter autotrophicus Py2]
 gi|154160914|gb|ABS68130.1| protein of unknown function DUF81 [Xanthobacter autotrophicus Py2]
          Length = 268

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 66/183 (36%), Gaps = 15/183 (8%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP+L     +         HVA+GTS   ++ +++ +   H R G +  +    +  
Sbjct: 30  ILAVPLLVYVVGVA------SPHVAIGTSAVAVSASALGNLFPHWRAGNVKWRCAAVFAA 83

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD--------RLYCERKFPDNY 157
              +     + +   VD   L   F +  +++G +ML+R         RL  E       
Sbjct: 84  AGVLGAFAGAAVAKAVDGQKLLALFGVVMVVIGAVMLRRREGRGNPDVRLSSETARELLP 143

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           +    G   G  SG  G+GGG      LML     +  A  TS    A            
Sbjct: 144 LLLGIGFTVGVFSGFFGIGGGFLIVPGLMLATRMPLAFAIGTSLVGVAAFGAATAASYAL 203

Query: 217 SGW 219
           SG 
Sbjct: 204 SGL 206


>gi|17546260|ref|NP_519662.1| hypothetical protein RSc1541 [Ralstonia solanacearum GMI1000]
 gi|17428557|emb|CAD15243.1| probable transmembrane protein [Ralstonia solanacearum GMI1000]
          Length = 273

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 7/99 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V+VP L +A         + M   + TSL VIA  SV   +     G ++  I   +  
Sbjct: 179 FVIVPALRRA-------TDLPMQTIVATSLAVIALVSVGGVLASAIGGHVDWHIALPFAA 231

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                 +       H+    L + FA F  ++ I ++ R
Sbjct: 232 GALAGMLTGRGFSRHLAGPALQQGFAAFAGVVAIGLVVR 270



 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 64/212 (30%), Gaps = 30/212 (14%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             + G +  L G GG +V VP+L     L     +    +A+G S G+ +   +      
Sbjct: 15  GSVVGLILALTGAGGAIVAVPLLIFGLHLSVSQAAPVALLAVGLSAGLGSVLGL------ 68

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR--- 146
            R G +  K            + +       V  + L   FA+    + I M  + R   
Sbjct: 69  -REGKVRYKAAALMALCGVALSPLGVWAAHRVPNTPLTVLFAMVLAHVAIRMFLQARATA 127

Query: 147 ---LYCERKFPDNYVKYIWGMVT------GFLSGALGVGGG-----------IFTNLLML 186
                     P  ++  + G +         L+      G            +    L  
Sbjct: 128 PAAPSPRHAAPPCHLDTVRGKLIWTLPCARTLASWGAAAGLLSGLLGVGGGFVIVPALRR 187

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
                +    ATS  V AL++   +L     G
Sbjct: 188 ATDLPMQTIVATSLAVIALVSVGGVLASAIGG 219



 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 11/124 (8%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
                   G V G +    G GG I    L++F    ++ + + +A V+ L    +  + 
Sbjct: 7   GWLASAGLGSVVGLILALTGAGGAIVAVPLLIF---GLHLSVSQAAPVALLAVGLSAGLG 63

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
              G           G V   A  ++    + ++PL    ++ +    LT+ F+M++   
Sbjct: 64  SVLGLRE--------GKVRYKAAALMALCGVALSPLGVWAAHRVPNTPLTVLFAMVLAHV 115

Query: 275 SFVF 278
           +   
Sbjct: 116 AIRM 119


>gi|284046484|ref|YP_003396824.1| hypothetical protein Cwoe_5038 [Conexibacter woesei DSM 14684]
 gi|283950705|gb|ADB53449.1| conserved hypothetical protein [Conexibacter woesei DSM 14684]
          Length = 132

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 41/90 (45%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
           +     M +   I  H A  TSL V+ PTS+++ +   R G ++++       +      
Sbjct: 30  TFMVPFMVLALGIGQHAAEATSLLVVLPTSLVATIVLARRGAVDVRQALKLGLMGAAGGA 89

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V +L+   +    L + F +F LL+ + ML
Sbjct: 90  VGALIALALPADVLRRVFGVFMLLVALRML 119


>gi|158315163|ref|YP_001507671.1| hypothetical protein Franean1_3363 [Frankia sp. EAN1pec]
 gi|158110568|gb|ABW12765.1| protein of unknown function DUF81 [Frankia sp. EAN1pec]
          Length = 259

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 7/105 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           + A    G L+GLFGVGGG +++P L            + M  A+GTSL VI   +V  F
Sbjct: 140 LGAGLGVGFLTGLFGVGGGFLIIPALVLLL-------GLPMPAAVGTSLVVIVTNAVAGF 192

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
             H   G +++ ++  +     +  +    +   +    L + FA
Sbjct: 193 AAHAGDGALDVPVVAAFTGAAVVGALGVGRVADRLPADRLRRWFA 237



 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 69/228 (30%), Gaps = 22/228 (9%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
             A   +     + +  A+  SL V+  +S  + +   R G +  +I   +         
Sbjct: 24  VLAVPALVYGAGLPLRAAVPASLLVVGISSATAAVARVRAGQVRWRIAAVFGVTGAAAAF 83

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGA 172
           V + +   +D + +   FA   +  G  ML+                   G +   L   
Sbjct: 84  VGAAVNRRLDPAIVLIGFAALMVAAGAQMLRGRSRLGGDCALPGGGTNWRGCLPKALGAG 143

Query: 173 LGVG----------GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           LGVG          G +    L+L  G  +  A  TS  V    A               
Sbjct: 144 LGVGFLTGLFGVGGGFLIIPALVLLLGLPMPAAVGTSLVVIVTNAVAGFAAHAGD----- 198

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
                  G +++  V      +++      +++  +    L   F+ +
Sbjct: 199 -------GALDVPVVAAFTGAAVVGALGVGRVADRLPADRLRRWFAYL 239


>gi|226306622|ref|YP_002766582.1| hypothetical protein RER_31350 [Rhodococcus erythropolis PR4]
 gi|226185739|dbj|BAH33843.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
           PR4]
          Length = 255

 Score = 45.1 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 89/238 (37%), Gaps = 26/238 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L++ A+  +G +  + G GGGL+++P L        +   +    A+ T+       +  
Sbjct: 8   LLMTAATAAGWVDAVVG-GGGLILLPALFL------VAPQLTPQAALATNKLTAFTGTSA 60

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +     R   +  + +     +  +T+   +  +S +DK +      +  + + + +  R
Sbjct: 61  AVYTFSRRIPMEWRQMAPAAALAAVTSACGAAAVSLIDKKYFIPIVMVVLVAVAVFVTMR 120

Query: 145 DRLYCE------RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
             L          +     V  +   + G   G LG G G F  +    F G    +   
Sbjct: 121 PTLGTTIATHRPTQRKTVLVLLLSAGLIGLYDGLLGPGTGTFLIISFATFLGTEFVR--- 177

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            SA ++ +I   +    +   + + G   WSLG       L +   ++L   + ++++
Sbjct: 178 -SAAMAKVINLGSNFGALAY-FAVTGHVWWSLG-------LAMAVCNVLGAVIGSRMA 226


>gi|332652720|ref|ZP_08418465.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
 gi|332517866|gb|EGJ47469.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
          Length = 258

 Score = 45.1 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 25/237 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V+ P+L     L         + A+G +L      S  S   + ++G +++K     + 
Sbjct: 31  TVITPMLVAFLHL-------PAYQAIGIALASDVLASAASARTYAKNGCVDIKNGMVMMA 83

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
            +   TVV S + S+V+   L         ++GI  L    L  +               
Sbjct: 84  GVLSMTVVGSWLSSYVESGTLGGFSIFMTWILGIRFLFFPILEPKNTMLRRSSMQKVCAG 143

Query: 166 TGFLSGALGV-------GGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
               +    +       GG +   +L +  G  +  A  TS  V    A    +     G
Sbjct: 144 AAGGALVGLICGFFGAGGGMMMLMVLTMLLGYELKTAVGTSVFVMTFSALTGAISHFALG 203

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                 PP  L       +++ +  +++    + K++       L     MI+ +  
Sbjct: 204 ----DTPPIRL-------LILCMIFTLIWAQASAKIAARSSPLALNRWTGMILTSLG 249


>gi|327398776|ref|YP_004339645.1| hypothetical protein Hipma_0616 [Hippea maritima DSM 10411]
 gi|327181405|gb|AEA33586.1| protein of unknown function DUF81 [Hippea maritima DSM 10411]
          Length = 247

 Score = 45.1 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 74/201 (36%), Gaps = 12/201 (5%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  LI     + G ++ L G G         S       I   +  ++A GT+   I 
Sbjct: 3   LLHAVLIFTIGCIVGLINVLAGGG---------SFLTLAFLIAIGLPPNIANGTNRVGIL 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ +  +  +   + +K          I  ++ S +  H+    L K  AIF +L+ +
Sbjct: 54  LQNIFASTKFYKLNILKLKFALIVSAPAIIGAILGSYIAIHIPNEILKKTIAIFMVLISL 113

Query: 140 LMLKRD-RLYCERKFPDNYVKYIWG--MVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           + +    +    R +      +I     + G   G +  G G F     L+ G ++ +A 
Sbjct: 114 VTIYNPNKFSKNRNYSSKKWVFILVSFFLIGIYGGFIQAGVGFFIIAASLWGGFNMVEAN 173

Query: 197 ATSAGVSALIAFPALLVRIYS 217
           A    +  L     L + I+S
Sbjct: 174 AIKVFIITLYTIIVLPLFIFS 194


>gi|193211725|ref|YP_001997678.1| hypothetical protein Cpar_0050 [Chlorobaculum parvum NCIB 8327]
 gi|193085202|gb|ACF10478.1| protein of unknown function DUF81 [Chlorobaculum parvum NCIB 8327]
          Length = 318

 Score = 45.1 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F  G + G+FG+G G   VPV +           + + V++ TS  V++     +   + 
Sbjct: 208 FAIGFIGGMFGLGAGFANVPVYNLLM-------GVPLKVSVATSGLVLSINGSAAAWVYI 260

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +G +   I    I  + I + + + ++  V+   +         L GI  L +
Sbjct: 261 FNGAVLPLITVPSIAGMMIGSKIGAKLLPKVNTKTIRMTVIAILALSGIRSLLK 314



 Score = 38.1 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 48/286 (16%), Positives = 100/286 (34%), Gaps = 50/286 (17%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQL-MGIDDSICMHVAMGTSLGVIAP 80
           ++  + V SF+ G ++ L GVGGG++ VP++S  F   +       + VA+  SL    P
Sbjct: 45  WVVGLFVFSFILGIVAVLGGVGGGVLFVPIVSSFFPFHLDYVRGAGLLVALAGSLAAGPP 104

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                     R G  ++K+      +  ++++  +++   +    +     I  L + ++
Sbjct: 105 L--------LRKGLADLKLGLPMALIGSVSSIAGAIVGLLLPAREIQLMLGIVVLGVTVI 156

Query: 141 MLKRDRL----------------------------YCERKFPDNYVKYIWGMVTGFLSGA 172
           M+   +                                 +     V  +     GF+ G 
Sbjct: 157 MITSGKSGYPAVRKQDRLSSILQLSGIYYEEFSRHEVSWQAHRTPVAMLLFFAIGFIGGM 216

Query: 173 LGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF 231
            G+G G        L  G  +  + ATS  V ++    A  V I++G  L  +   S+  
Sbjct: 217 FGLGAGFANVPVYNLLMGVPLKVSVATSGLVLSINGSAAAWVYIFNGAVLPLITVPSI-- 274

Query: 232 VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                        ++ + +  KL   +  K + +    I+  +   
Sbjct: 275 ----------AGMMIGSKIGAKLLPKVNTKTIRMTVIAILALSGIR 310


>gi|327412793|emb|CAX67799.1| putative membrane protein [Yersinia enterocolitica]
          Length = 249

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 14/155 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  I     ++  + G+ G G  L+  PVL+    +  I   + +         V    +
Sbjct: 10  MVAIFSTMVIAYIIFGITGFGSALIASPVLALFIPVAKIVPLLAI---------VDMVAA 60

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +   H RH  I    LK  + ++ I +++ + ++       L  A  IF +L  I  L
Sbjct: 61  ITNVARHSRHADI--AELKRLVPLMIIGSLIGATILLRTRPDILLLALGIFVILYAIYSL 118

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
            R +   + K         +G++ G  S   G GG
Sbjct: 119 NRRKPQKQFK---PTAAIPFGLIGGIFSALFGSGG 150


>gi|167766918|ref|ZP_02438971.1| hypothetical protein CLOSS21_01435 [Clostridium sp. SS2/1]
 gi|167710893|gb|EDS21472.1| hypothetical protein CLOSS21_01435 [Clostridium sp. SS2/1]
          Length = 224

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 59/161 (36%), Gaps = 5/161 (3%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             +  H A+ T+    +  +  + +   + G IN  I         + + + + +  + +
Sbjct: 46  AGLPPHRAIATNKLSSSMGTAAATVRFAKMGHINFNIALSCSVTAILGSFLGASLSVYTN 105

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW----GMVTGFLSGALGVGGG 178
           +  +     +   ++ + +L   + +       +   YI       V G   G  G G G
Sbjct: 106 ERIIQIFILVLLPILFVYLLFTKKDFDSFVLEISKSTYIASILSAFVIGIYDGFYGPGTG 165

Query: 179 IFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
            F  L +  + G  +  A+  +  ++ +    AL+  ++ G
Sbjct: 166 TFLLLCLTRFAGLDVLTASGVTKFINLVTNLTALVTFLFYG 206


>gi|145356751|ref|XP_001422589.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582832|gb|ABP00906.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 168

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++     +G  SGL G+GGG ++ P+L+           +     +GTSL  + P SV++
Sbjct: 54  LVAVGATAGFASGLLGIGGGTLVTPLLALV-------SPLPQAAVLGTSLLAMLPPSVVA 106

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H R G ++ ++         +     S       +  L   F    L +     +  
Sbjct: 107 LGTHYRMGNVDPRMGAALAVGTALGGAFGSSFAVDAPRGALEAVFFFGMLFLSNRTFRSL 166

Query: 146 R 146
           R
Sbjct: 167 R 167


>gi|257453499|ref|ZP_05618789.1| putative membrane protein [Enhydrobacter aerosaccus SK60]
 gi|257448957|gb|EEV23910.1| putative membrane protein [Enhydrobacter aerosaccus SK60]
          Length = 289

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 86/253 (33%), Gaps = 40/253 (15%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L    +       +  H+A+GT L   A +     + H +   +   I+      
Sbjct: 26  LMTPILILLLK-------VEPHIAVGTDLLYAAISKFFGGVVHFKKSNVVWPIVLWLAIG 78

Query: 107 LPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGILMLKRDRLYC----------- 149
               ++VT+ +I+    +       +     +   + GI ++ R+R+             
Sbjct: 79  SIPASIVTNYLIATYLGNINAIKLIMTLILGVMLTITGISLIFRNRIEAFFDKYRKTDQT 138

Query: 150 --ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN--LLMLFYGASIYKATATSAGVSAL 205
                    Y   + G++ G +     VG G F    L+++F    + +   +    + L
Sbjct: 139 DSLTSQIPKYKLVLMGILLGVVVTLSSVGAGAFGVMALVLIFPQLPLIRIIGSDVVHAVL 198

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           +   A L  + SG     +            +  +L  +I    + T LS  + +K L  
Sbjct: 199 LTLVAGLGHLLSGSVDFHM------------LTFLLIGAIPAIIVGTLLSSKLPEKKLRP 246

Query: 266 GFSMIMFTTSFVF 278
              + +      F
Sbjct: 247 ILGVTLLLLGINF 259



 Score = 37.0 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 48/119 (40%), Gaps = 6/119 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++   L G +  L  VG G   V  L   F        + +   +G+ +      ++++
Sbjct: 150 LVLMGILLGVVVTLSSVGAGAFGVMALVLIF------PQLPLIRIIGSDVVHAVLLTLVA 203

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            + H   G+++  +L   +       +V +L+ S + +  L     +  LL+GI  +  
Sbjct: 204 GLGHLLSGSVDFHMLTFLLIGAIPAIIVGTLLSSKLPEKKLRPILGVTLLLLGINFVVN 262


>gi|152983129|ref|YP_001354754.1| thiol:disulfide interchange protein DsbD [Janthinobacterium sp.
           Marseille]
 gi|151283206|gb|ABR91616.1| thiol:disulfide interchange protein DsbD [Janthinobacterium sp.
           Marseille]
          Length = 591

 Score = 44.7 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 63/212 (29%), Gaps = 38/212 (17%)

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
            ++  TS              + +   +  +  +T +  S + S +   +L   FA+  L
Sbjct: 205 TMVIGTSTSVKRNLTLTAAYVLAMASTYAVLGVVTGLAGSNVQSALQSPWLLGTFAVLFL 264

Query: 136 LMGILML----KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
           ++   M      +   Y   K          G + G  S  LG    I     M      
Sbjct: 265 ILAASMFGWFEFQLPSYITNKLSSLSGNRAQGSIVG--SVLLGFASAILVGPCM------ 316

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
                 T+    AL+           G+ L     +SLG       L +     LI    
Sbjct: 317 ------TAPLAGALLYIGQTGDAATGGFAL-----FSLG-------LGMGLPLFLIAVFG 358

Query: 252 TKLSYMIGKK-----YLTIGFSMIMFTTSFVF 278
           T++   + K       + + F  +M   +  F
Sbjct: 359 TRI---LPKPGAWMDRMRVAFGYVMVAMAIYF 387


>gi|312870032|ref|ZP_07730169.1| putative membrane protein [Lactobacillus oris PB013-T2-3]
 gi|311094429|gb|EFQ52736.1| putative membrane protein [Lactobacillus oris PB013-T2-3]
          Length = 251

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 64/153 (41%), Gaps = 4/153 (2%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A  TS+    P  +M    + R G IN ++    +     +  V S +   + +      
Sbjct: 44  AAATSIVTSLPALIMGSWSYYRRGLINFRLGNRMLIAAIPSIFVGSFISPWLPERVYKLV 103

Query: 130 FAIFCLLMGILMLKR----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
             +  + +G+ ++ +     +   + +F       ++G++ G + G  G+ GG      +
Sbjct: 104 IGLILIFLGVQLIVKLYRQPKAGHQSRFSPEAASVLYGIMGGLMVGIAGLSGGGPITTGL 163

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           L  GAS+  A+ATSA V   ++    L+ I  G
Sbjct: 164 LLLGASMAAASATSAYVLVGMSVVGALLHISGG 196


>gi|170728235|ref|YP_001762261.1| hypothetical protein Swoo_3908 [Shewanella woodyi ATCC 51908]
 gi|169813582|gb|ACA88166.1| protein of unknown function DUF81 [Shewanella woodyi ATCC 51908]
          Length = 252

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 94/255 (36%), Gaps = 28/255 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  + +  L++V  F +G ++ L G GG  + +P L     +MG+       VA  T+  
Sbjct: 2   DITLTHAVLLLVTGFFAGIINTLAG-GGSNLTLPALM----VMGMPAE----VANATNRV 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   S+++ +  ++HG ++       +    +  ++ +   ++    ++        LL
Sbjct: 53  GVLMQSIVAVLGFKKHGKLDTDDTVPILIPTIVGGLLGAAGAAYAPSEWIKPLLLGTMLL 112

Query: 137 MGILMLKRDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYG 189
           M  ++L +  +         ++       + W  V GF  G +  G G +    L     
Sbjct: 113 MAFIILVKPSMVAPELGTPVKQVSQTPASWWWLGVAGFYGGFVQAGVGFVLLAALAGSLR 172

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             + +A A     + +    AL++ I  G             +     LI+   ++    
Sbjct: 173 YDLVRANALKMLCTLVFTSVALVLFIIEGL------------IQWLPGLILALSTMFGAH 220

Query: 250 LATKLSYMIGKKYLT 264
           LA KL+       L 
Sbjct: 221 LAVKLAIKAKPDTLK 235


>gi|256789836|ref|ZP_05528267.1| hypothetical protein SlivT_35603 [Streptomyces lividans TK24]
 gi|289773719|ref|ZP_06533097.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289703918|gb|EFD71347.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 254

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 79/222 (35%), Gaps = 30/222 (13%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF--------V 106
            F L G+  +       GT++     T +++   + R G +     +             
Sbjct: 37  LFALTGLTPAQVA----GTAIVTHVATGMLATAAYTRSGQLREPGTRRTALVLAVSAVAG 92

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD--RLYCERKFPDNYVKYIWGM 164
            P+  +V S +   +    L     +F   +  L+  R+  R    R  P   V    G 
Sbjct: 93  TPLGVLVNSYVSKRMFGLVL----GVFVAGVAGLVWFREHRRPAGSRAHPPTAVVAGMGC 148

Query: 165 VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
                +G +G+GG + T  L++  G  + ++ A++   S +IA    +  +         
Sbjct: 149 AVAVAAGVVGIGGPMLTVPLLVALGVPVLESLASAQAQSVVIAGVGTVGYLAQ------- 201

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
                G V+    +++    +    L  ++++ +  ++L   
Sbjct: 202 -----GAVDWPLAVLVGVPELAGVLLGWRIAHALPTRHLKYA 238


>gi|120406776|ref|YP_956605.1| hypothetical protein Mvan_5834 [Mycobacterium vanbaalenii PYR-1]
 gi|119959594|gb|ABM16599.1| protein of unknown function DUF81 [Mycobacterium vanbaalenii PYR-1]
          Length = 257

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 7/116 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I A  L G L+GLFGVGGG +++P L            I M  A+GTSL +I   S+   
Sbjct: 142 IGAGLLVGVLTGLFGVGGGFLIIPALVVVL-------GIEMSTAIGTSLLIIVANSLAGL 194

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + H      N  I   ++     T++V     + VD   L + FA     +   +L
Sbjct: 195 VSHLDAVGGNWSITAAFVGAAMATSLVAGHFGTKVDTDRLQRWFAYLVFAVAAYVL 250



 Score = 40.4 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 77/239 (32%), Gaps = 29/239 (12%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L            + +  A+  SL V+A  S +  +   R G +  ++   +     
Sbjct: 29  VPALVY-------GTGLSIGQAIPISLIVVAAASAVGALPRIRAGQVRWRMAGIFAAAGI 81

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN---------YVK 159
             TV  S +  H+ +  L   FA+  ++ GI ML                          
Sbjct: 82  PATVAGSAVSRHLPEPVLMIGFAVVMVVAGIRMLADQGHTGTACEIRGGQVDWRRCAPRS 141

Query: 160 YIWGMVTGFLS-GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
              G++ G L+      GG +    L++  G  +  A  TS  +    +   L+  + + 
Sbjct: 142 IGAGLLVGVLTGLFGVGGGFLIIPALVVVLGIEMSTAIGTSLLIIVANSLAGLVSHLDAV 201

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            G            N       +  ++  + +A      +    L   F+ ++F  +  
Sbjct: 202 GG------------NWSITAAFVGAAMATSLVAGHFGTKVDTDRLQRWFAYLVFAVAAY 248


>gi|260062760|ref|YP_003195840.1| hypothetical protein RB2501_14259 [Robiginitalea biformata
           HTCC2501]
 gi|88784328|gb|EAR15498.1| hypothetical protein RB2501_14259 [Robiginitalea biformata
           HTCC2501]
          Length = 251

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 74/202 (36%), Gaps = 15/202 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  L++V  F  G ++ + G G  L+ +PVL            +   VA GT+   I   
Sbjct: 6   HYLLLVVVGFAVGFINTVAG-GASLISLPVLIWL--------GLPPAVANGTNRVAIVLQ 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + M+    R  G                 +++ + +   +     N+  AI  +++ +++
Sbjct: 57  TAMATAGFRSKGVSTFPFNGYLGLAAVAGSLIGAYLAVDISGELFNRILAIIMVVVVLVI 116

Query: 142 LKRDRLYCERKFPDNYVKYIWG-----MVTGFLSGALGVGGGIFTNLLMLFY-GASIYKA 195
             +  +  +        +Y+W         G   G +  G G    L + ++    + + 
Sbjct: 117 AFKPGVQIDTLQERLTGRYLWAGCLAFFFIGIYGGFINAGVGFIIILFLHYFHRMDLVRT 176

Query: 196 TATSAGVSALIAFPALLVRIYS 217
            AT   V  +    AL+V I +
Sbjct: 177 NATKVAVVCIYTIAALIVFIVN 198


>gi|258406238|ref|YP_003198980.1| hypothetical protein Dret_2118 [Desulfohalobium retbaense DSM 5692]
 gi|257798465|gb|ACV69402.1| protein of unknown function DUF81 [Desulfohalobium retbaense DSM
           5692]
          Length = 324

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 47/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  V   + G ++G+FG+G G   VPVL+             + V++ TS  +++ T  
Sbjct: 203 WMGFVMFMVIGIVAGMFGLGAGWANVPVLNLLMGA-------PLKVSVATSKFLLSITDT 255

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   +   G +   +    I  L + + V   +++     F+           G+  L 
Sbjct: 256 SAAWIYLNKGCVIPLMAIPSIIGLMLGSFVGVRILAVAKPKFIRYMVIGVLFFAGLKALD 315

Query: 144 R 144
           +
Sbjct: 316 K 316



 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 99/286 (34%), Gaps = 51/286 (17%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++   F+ G ++ L GVGGG++ VP++S  F          +    G  L V    ++
Sbjct: 46  LILLFFCFVLGVVAVLAGVGGGVLYVPLVSGFFPF-------HIDFVRGAGLMVALAGAL 98

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI---SHVDKSFLNKAFAIFCLLMGIL 140
            +     R    ++++      +     +  +++    S ++  ++  A     + + IL
Sbjct: 99  AAGPGLLRRNLADLRLALPVALIASTFAIAGAMLGLYLSRLNPDYVQIALGATIIFIAIL 158

Query: 141 MLKRDRLYCERKFPDNYVKYIWG----------------------------MVTGFLSGA 172
           +              + +    G                            MV G ++G 
Sbjct: 159 LTVSKNSERPVVTKQDALGLALGMSGMYHDDSSGEDVTWKTHRTWMGFVMFMVIGIVAGM 218

Query: 173 LGVGGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF 231
            G+G G     ++ L  GA +  + ATS  + ++    A  + +  G  +  +       
Sbjct: 219 FGLGAGWANVPVLNLLMGAPLKVSVATSKFLLSITDTSAAWIYLNKGCVIPLMA------ 272

Query: 232 VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             I +++ ++  S     +  ++  +   K++      ++F     
Sbjct: 273 --IPSIIGLMLGSF----VGVRILAVAKPKFIRYMVIGVLFFAGLK 312


>gi|89094389|ref|ZP_01167329.1| hypothetical protein MED92_16655 [Oceanospirillum sp. MED92]
 gi|89081281|gb|EAR60513.1| hypothetical protein MED92_16655 [Oceanospirillum sp. MED92]
          Length = 261

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 82/238 (34%), Gaps = 37/238 (15%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L   F        + +   + T L   A T + S   H ++  I+ ++ K     
Sbjct: 28  LMAPILLLGF-------GLELTAVVATDLLFAAVTKLASSTVHNKNKLIDWQVSKRMWLG 80

Query: 107 LPITTVVTSLMISH----VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD------- 155
               +++T  ++S+     +  ++ K       + GI +L   +L   ++          
Sbjct: 81  SIPASLLTLSLVSYGIIESNSEWIIKLLGGLIFMSGISILFGSKLQLFQRTQRIQAPDQF 140

Query: 156 ----NYVKYIWGMVTGFLSGALGVGGGIFTNLLML---FYGASIYKATATSAGVSALIAF 208
                    + G + G L     +G G    +++        +  K  AT    +  ++ 
Sbjct: 141 KKMQAPTTTLSGALLGTLVTLTSIGAGALGAVILRSLYPLRMNTQKLVATDTIHAIPVSL 200

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
            A    +             LG VNI  ++++L  SI     ++ +   +    +  G
Sbjct: 201 IAGAGYLL------------LGHVNIEILILMLSGSIPGAIFSSNIIKKVSPHIIKKG 246


>gi|322368182|ref|ZP_08042751.1| hypothetical protein ZOD2009_01830 [Haladaptatus paucihalophilus
           DX253]
 gi|320552198|gb|EFW93843.1| hypothetical protein ZOD2009_01830 [Haladaptatus paucihalophilus
           DX253]
          Length = 301

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 73/221 (33%), Gaps = 30/221 (13%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQ-LMGIDDSICMHVAMGTSLGVIAPT 81
           +   ++ +FL  T    F +   ++  P     +  L+     + +  A+G +L V    
Sbjct: 12  LAFFVLLTFLIATTVNTFAMEAAVLFTPAFLFVYPELVPAFPDLALQGAIGLALFVELFG 71

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              S   +   G ++  + K  + V     +V   +   V  + L   F    L++  ++
Sbjct: 72  YTSSVSAYWFRGQVDWTVAKAVLAVSVPVAIVARAVSYFVPSTALKVLFGGMLLVLSFVL 131

Query: 142 LKRDR-------------------------LYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
               R                            +    D + + I G+  G ++G +G+ 
Sbjct: 132 YLSHRDGKSLGDLVDASRLFGDSSRIRTDGGTPDTTQFDRFDRTIAGVG-GAMAGLVGIA 190

Query: 177 GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
            G     L+         +   S G SALI    ++  + +
Sbjct: 191 IGELAQTLLTVRKN---VSIRISTGTSALILHGTIVSALVA 228


>gi|254558975|ref|YP_003066070.1| hypothetical protein METDI0347 [Methylobacterium extorquens DM4]
 gi|254266253|emb|CAX22011.1| conserved membrane protein of unknown function, DUF81
           [Methylobacterium extorquens DM4]
          Length = 268

 Score = 44.7 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 81/240 (33%), Gaps = 29/240 (12%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L+    +         HVA+GTS   ++ ++  + +   R G +  +    +     
Sbjct: 33  VPLLTYVVGVS------SPHVAIGTSALAVSVSAAGNLIPQWRAGNVKWRCAVAFSLAGI 86

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP----DNYVKYIWGM 164
           +  +  S     VD   L   F +  L++G LML++ R   + +         V   W +
Sbjct: 87  LGALAGSAAAKAVDGQSLLALFGVVMLVVGGLMLRKRRGEGDPEVRLTKASAPVLLPWLL 146

Query: 165 VTGFL-----SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
             GF            GG +    LML     +  A  TS    +            SG 
Sbjct: 147 GIGFAVGLFSGFFGIGGGFLIVPGLMLATSMPLSMAIGTSLVAVSAFGAATAASYAVSGL 206

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG--KKYLTIGFSMIMFTTSFV 277
                       +N     + +   +L   +  +L   +   K+ LT+ F+ ++      
Sbjct: 207 ------------INWPVAGLFILGGVLGGLVGARLGKRLAGHKRALTVTFAGLVILVGLY 254


>gi|332162824|ref|YP_004299401.1| hypothetical protein YE105_C3204 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604335|emb|CBY25833.1| putative membrane protein [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325667054|gb|ADZ43698.1| hypothetical protein YE105_C3204 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330859016|emb|CBX69374.1| hypothetical protein YEW_KB43400 [Yersinia enterocolitica W22703]
          Length = 249

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 14/155 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  I     ++  + G+ G G  L+  PVL+    +  I   + +         V    +
Sbjct: 10  MVAIFSTMVIAYIIFGITGFGSALIASPVLALFIPVAKIVPLLAI---------VDMVAA 60

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +   H RH  I    LK  + ++ I +++ + ++       L  A  IF +L  I  L
Sbjct: 61  ITNVARHSRHADI--AELKRLVPLMIIGSLIGATVLLRTRPDILLLALGIFVILYAIYSL 118

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
            R +   + K         +G++ G  S   G GG
Sbjct: 119 NRRKPQKQFK---PTAAIPFGLIGGIFSALFGSGG 150


>gi|118348622|ref|XP_001007786.1| hypothetical protein TTHERM_00069480 [Tetrahymena thermophila]
 gi|89289553|gb|EAR87541.1| hypothetical protein TTHERM_00069480 [Tetrahymena thermophila
           SB210]
          Length = 575

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 10/140 (7%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           L  +  ++YI  I +A   +G L+G FGVG GL +VP+L       G+       VA  T
Sbjct: 426 LDVNNNMNYIK-ISLAGLTAGMLAGTFGVGAGLALVPILL----ASGVHP----QVAAAT 476

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI-SHVDKSFLNKAFAI 132
                   S  + ++   +  +N+  +  +  +  I   + + +I  +V+K   +     
Sbjct: 477 CGFNYFFISTTTIIQVFTNDYLNISQIILFSILSFIGGFLCAKLIYRYVEKKKASYLIVF 536

Query: 133 FCLLMGILMLKRDRLYCERK 152
               + IL +    +Y  +K
Sbjct: 537 IVFGLAILNILAFIVYLTKK 556



 Score = 35.4 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 14/115 (12%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
            + G+  G L+G  GVG G+    ++L  G     A AT       I+   ++    +  
Sbjct: 438 SLAGLTAGMLAGTFGVGAGLALVPILLASGVHPQVAAATCGFNYFFISTTTIIQVFTND- 496

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
                      ++NI  +++   +S +   L  KL Y   +K       +I+F  
Sbjct: 497 -----------YLNISQIILFSILSFIGGFLCAKLIYRYVEK--KKASYLIVFIV 538


>gi|318058884|ref|ZP_07977607.1| hypothetical protein SSA3_13120 [Streptomyces sp. SA3_actG]
 gi|318080522|ref|ZP_07987854.1| hypothetical protein SSA3_28496 [Streptomyces sp. SA3_actF]
          Length = 262

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 8/156 (5%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           +GT+  V    +  +   + R G  +N++I         + + + +L  + +    L   
Sbjct: 52  LGTNKAVAIVGTGGAAFTYVRKGAPVNVRIAVGIGGAALLGSTIGALFAAGISSDVLRPM 111

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDN------YVKYIWGMVTGFLSGALGVGGGIFTNL 183
             +  L +   ++ R     +   P            + G+  G   G  G G G F  L
Sbjct: 112 IMVVLLAVLAFVMLRPAFGTQAAGPAAGRGRVVAAILLAGLGIGAYDGFFGPGTGTFLVL 171

Query: 184 LMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
            +       +  A+AT+  V+      AL+     G
Sbjct: 172 ALTAVLRLDLVSASATAKIVNTCTNLGALVTFAVQG 207


>gi|160940895|ref|ZP_02088235.1| hypothetical protein CLOBOL_05787 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436139|gb|EDP13906.1| hypothetical protein CLOBOL_05787 [Clostridium bolteae ATCC
           BAA-613]
          Length = 251

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 75/197 (38%), Gaps = 18/197 (9%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           FL+G +  + G GGGL+ +P    A         +  HVA+GT+    A  + +S     
Sbjct: 12  FLAGLVDSIAG-GGGLIALPAYLIA--------GVPAHVALGTNKLSSAMGTTVSTARLA 62

Query: 91  RHGTINMKILKDWI--FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
           +HG +  K+L          + + + + +   V +S +     +   ++   +L+   + 
Sbjct: 63  KHGFLKGKVLMAVCSSAAALMGSALGAHLALMVPESVIKHMMIVVLPVVAFYVLRNKDMG 122

Query: 149 CERKFPD------NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAG 201
              +  D        +        G   G  G G G F  L++    G     A+A +  
Sbjct: 123 ARDRTEDISRNKVFAISMAAAFFVGGYDGFYGPGTGTFLILILTGAAGMDARSASAQTKV 182

Query: 202 VSALIAFPALLVRIYSG 218
           ++      AL+  I +G
Sbjct: 183 INLSSNIAALVTFIATG 199


>gi|118348626|ref|XP_001007788.1| hypothetical protein TTHERM_00069500 [Tetrahymena thermophila]
 gi|89289555|gb|EAR87543.1| hypothetical protein TTHERM_00069500 [Tetrahymena thermophila
           SB210]
          Length = 570

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 11/144 (7%)

Query: 12  VFLSKDCVVDYICL--IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
            F     V + I    I VA   +G L+G FGVG GL +VP+L       G++      V
Sbjct: 416 EFADDLDVTNSIMYAKISVAGLTAGMLAGTFGVGAGLALVPILL----ASGVNP----QV 467

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNK 128
           A  T        S  + ++   +  +++  +  +  +  I   V +  + + V++   + 
Sbjct: 468 AAATCGFNYFFISTTTIIQVFTNSYLDLSQIVLFSILSFIGGFVIAKFIYNFVERKKASY 527

Query: 129 AFAIFCLLMGILMLKRDRLYCERK 152
                   + IL +    +Y  +K
Sbjct: 528 LVVFMVFGLAILNIISFIIYLTKK 551


>gi|119356479|ref|YP_911123.1| hypothetical protein Cpha266_0644 [Chlorobium phaeobacteroides DSM
           266]
 gi|119353828|gb|ABL64699.1| protein of unknown function DUF81 [Chlorobium phaeobacteroides DSM
           266]
          Length = 276

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 45/126 (35%), Gaps = 7/126 (5%)

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML------KRDRLYC 149
           N +++ + +    I   + +   + +    L K  A   L +  ++          +   
Sbjct: 84  NWQVILNLLAGSLIGAWLGAGWATILRSEGLYKIIAFLLLAIACVLAGSHMVHGSGKPLL 143

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAF 208
           E          + G + G ++  LGV GG +    L++ +G +I  A + S  +S     
Sbjct: 144 ENVIALAVSGVLAGFIIGIVAALLGVAGGELLIPTLVILFGVNIKLAGSLSLAISLPTML 203

Query: 209 PALLVR 214
            +    
Sbjct: 204 VSFARY 209



 Score = 43.5 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 12/132 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           + V+      ++A F+ G ++ L GV GG +++P L   F        + + +A   SL 
Sbjct: 144 ENVIALAVSGVLAGFIIGIVAALLGVAGGELLIPTLVILF-------GVNIKLAGSLSLA 196

Query: 77  VIAPTSVMSFMEHRRHGTI-----NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
           +  PT ++SF  + R  +      N   L          T +  +++  V +S L     
Sbjct: 197 ISLPTMLVSFARYSRDSSFSVLGANRSFLFIMAAGSLCGTWIGGMLLGIVSESILIPMLV 256

Query: 132 IFCLLMGILMLK 143
           +  +L  I + +
Sbjct: 257 LLLILSAIKVWR 268


>gi|325287938|ref|YP_004263728.1| hypothetical protein Celly_3040 [Cellulophaga lytica DSM 7489]
 gi|324323392|gb|ADY30857.1| protein of unknown function DUF81 [Cellulophaga lytica DSM 7489]
          Length = 250

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 80/201 (39%), Gaps = 15/201 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  L+I   F+ G ++ + G GG L+ + VL       GI  S    VA GT+   IA  
Sbjct: 6   HYLLLIAVGFIVGFINTVAG-GGSLLSLGVLIF----FGIPPS----VANGTNRVAIAIQ 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S++     +  G               + ++V + +   V     NK  AI  +++ +++
Sbjct: 57  SMLGVAGFKSKGVSTFPFNIYLGISAMLGSIVGANIAVEVSGETFNKILAIVMIVVLLII 116

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTG-----FLSGALGVGGGIFTNLLMLFYG-ASIYKA 195
           + + +L  E        K++W  +          G +  G G    L + +    ++ +A
Sbjct: 117 IFKPKLKAEDIQERITGKHLWIGIIAFFFFGVYGGFINAGLGFIIILFLHYANHMTLVRA 176

Query: 196 TATSAGVSALIAFPALLVRIY 216
            AT   V  +    AL V IY
Sbjct: 177 NATKVAVVLIYTLAALAVFIY 197


>gi|149913803|ref|ZP_01902335.1| hypothetical protein RAZWK3B_17408 [Roseobacter sp. AzwK-3b]
 gi|149812087|gb|EDM71918.1| hypothetical protein RAZWK3B_17408 [Roseobacter sp. AzwK-3b]
          Length = 267

 Score = 44.7 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 55/161 (34%), Gaps = 12/161 (7%)

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD 155
           +  I+ + +    +   + +   + +    L+K  A+  + +  ++L    +       +
Sbjct: 84  HWPIILNLLAGSLLGAWIGAGWATRLQSRTLHKVLAVLMVGIAAVLLVGHDVSASHVPMN 143

Query: 156 NYVKYIWG----MVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPA 210
              + + G     + G ++  +GV GG +    L++ +G  I  A + S  +S       
Sbjct: 144 ETARVLAGICAGFLIGSVASLMGVAGGELLIPTLVVMFGVDIKLAGSMSLVISLPTVMIG 203

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
                            S        +L++   SIL   L 
Sbjct: 204 FARYSRDQSFKVLAQNRSF-------LLVMAAGSILGVFLG 237



 Score = 37.7 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 12/109 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +   I A FL G+++ L GV GG +++P L   F        + + +A   SL +  PT 
Sbjct: 148 VLAGICAGFLIGSVASLMGVAGGELLIPTLVVMF-------GVDIKLAGSMSLVISLPTV 200

Query: 83  VMSFMEHRRHGTI-----NMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           ++ F  + R  +      N   L        +   +  LM++   ++ L
Sbjct: 201 MIGFARYSRDQSFKVLAQNRSFLLVMAAGSILGVFLGGLMLALAPQTVL 249


>gi|51892788|ref|YP_075479.1| hypothetical protein STH1650 [Symbiobacterium thermophilum IAM
           14863]
 gi|51856477|dbj|BAD40635.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 242

 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 60/157 (38%), Gaps = 14/157 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++ + S  +  +   FG+G G++  PVL+   +            AMG +  V+  +SV
Sbjct: 4   LIVAIVSLGTSFVKTAFGLGAGVLFGPVLALFLE---------PRQAMGMTAPVMFLSSV 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   H R    +  +L+  +        + S+ ++      L +A  +  +   ++ + 
Sbjct: 55  AALAAHWRRW--DWPVLRRLLPTALAGLWLGSVFLAQAPAPHLRRAIGVAAVSFAVVQVA 112

Query: 144 RDRLYCERKFPDNYVK---YIWGMVTGFLSGALGVGG 177
           R R         ++      + G   G +SG    GG
Sbjct: 113 RLRRGAAVSPAGDWAPGPAVLLGFTGGVVSGIAHSGG 149


>gi|167525260|ref|XP_001746965.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774745|gb|EDQ88372.1| predicted protein [Monosiga brevicollis MX1]
          Length = 499

 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 43/113 (38%), Gaps = 2/113 (1%)

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL-VRIYSGWG 220
                G  +  +G+GGG+  + LML  G +    T TS+ +    +  +   V + +   
Sbjct: 347 MAFFAGLCASMMGIGGGLIKSPLMLSMGLNPQTTTTTSSFMIIFTSSASTFQVWLRALVS 406

Query: 221 LNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
               P + + G ++   +  ++        +  K+   + +KY      M + 
Sbjct: 407 TPKAPHYLILGKLHGAELAAVMASGFAGALMGQKVVNHLVQKYQKQSLLMFLL 459



 Score = 40.8 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 9/98 (9%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           +F +G  + + G+GGGL+  P++      MG++          TS  +I  TS  S  + 
Sbjct: 348 AFFAGLCASMMGIGGGLIKSPLML----SMGLNP----QTTTTTSSFMIIFTSSASTFQV 399

Query: 90  RRHGTIN-MKILKDWIFVLPITTVVTSLMISHVDKSFL 126
                ++  K     I        + ++M S    + +
Sbjct: 400 WLRALVSTPKAPHYLILGKLHGAELAAVMASGFAGALM 437


>gi|320008047|gb|ADW02897.1| protein of unknown function DUF81 [Streptomyces flavogriseus ATCC
           33331]
          Length = 247

 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 84/256 (32%), Gaps = 18/256 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L +VA  + G   G  G GG ++ VP L        +        A    L ++A TS
Sbjct: 4   LILALVAGAVIGLALGALGGGGSVLTVPALIYLLGFSPVS-------ATTAGLIIVAVTS 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   H R G +  +    +     +  V+      H+  + L  AFA+   L  + ML
Sbjct: 57  ATALYAHARDGNVAWRTGALFAAAGIVPAVLAGAAAGHLPAAALTTAFAVVAALAAVRML 116

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
           +        +            +          GG +    L+   G  + +A  TS  V
Sbjct: 117 RPSGAEPPERIRPAGAAGAGAGLGAVTGFLGVGGGFLAVPALVGVLGLRMKQAVGTSLLV 176

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
             + +  AL  R  +G           G +    +      +IL      +L+  I    
Sbjct: 177 ITVNSLAALTARAGTG-----------GDLRWEVIAPFTGAAILGAWDGKRLASKITGPT 225

Query: 263 LTIGFSMIMFTTSFVF 278
           L   F+ ++   +   
Sbjct: 226 LQRVFAFVLLGVAAFM 241



 Score = 42.8 bits (100), Expect = 0.059,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 8/95 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR-RHGTINMKILKDWIFVL 107
           VP L            + M  A+GTSL VI   S+ +        G +  +++  +    
Sbjct: 155 VPALVGVL-------GLRMKQAVGTSLLVITVNSLAALTARAGTGGDLRWEVIAPFTGAA 207

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +       + S +    L + FA   L +   ML
Sbjct: 208 ILGAWDGKRLASKITGPTLQRVFAFVLLGVAAFML 242


>gi|239993505|ref|ZP_04714029.1| hypothetical protein AmacA2_03316 [Alteromonas macleodii ATCC
           27126]
          Length = 302

 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 77/221 (34%), Gaps = 20/221 (9%)

Query: 4   LLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD 63
            L+  SL+   +   +V    L  V   +    +   G GGG+V VP  +          
Sbjct: 19  FLWIGSLLAQPAPIELVKDFGLFSVLGVIGAIFANATGAGGGVVFVPFFNYL--SFSAQS 76

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            +    A+          +  ++ +H+       K L   + +   +++       +  +
Sbjct: 77  VVATSFAIQCCGMTAGALTWAAYYKHQHKYDQYWKALPSVLMLTVPSSICGIGFAQYSSQ 136

Query: 124 SF------------LNKAFAIFCLLMGILML------KRDRLYCERKFPDNYVKYIWGMV 165
           S             L+ AF  F +L+ I +       KR     +    D  +    G +
Sbjct: 137 STRLLEHLWGGANNLHIAFGSFSILLAIAIFASIPLMKRTHFKKDLHTKDLLLLPFIGFL 196

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
            G ++  L VG G    + ++  G ++  + A++  +SA  
Sbjct: 197 GGIITAWLSVGVGELVAVYLIIRGFNVTLSIASAVILSAFT 237


>gi|288574565|ref|ZP_06392922.1| protein of unknown function DUF81 [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288570306|gb|EFC91863.1| protein of unknown function DUF81 [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 251

 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 97/260 (37%), Gaps = 26/260 (10%)

Query: 25  LIIVASFLSGTLSGLFGV---GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           L +VA FL G  +G   V   GG L+ +P+L            + + +A  T+   I   
Sbjct: 5   LSLVAVFLVGVAAGFLNVTAGGGSLLSLPMLVF--------TGLSLPMANATNRISIFFQ 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + ++     R G ++++          I +VV + +   ++   L  + +I   +M  L+
Sbjct: 57  NTVATTRFYRSGVLSVREALSLAVPATIGSVVGTSLAIELNPKVLQISISILISVMAFLL 116

Query: 142 LKRDRLYCERKFPD--NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATAT 198
           + +  ++ + +  D      ++     G   G +  G G      +  F G  + ++ A 
Sbjct: 117 MFKPSMWEKERSRDVPKPALFLLFFGIGVYGGFVQAGVGFIFLWALSGFVGHDLVRSNAL 176

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
              V       ++ +    G             +++   L++   S+L   L  + +   
Sbjct: 177 KVAVILCYTSISVAMFAAKGL------------LDLKVGLVLACGSMLGGYLGARFAVSK 224

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
           G +++    +  +  ++F  
Sbjct: 225 GSRWIRWMVAGAVIVSAFKM 244


>gi|166031392|ref|ZP_02234221.1| hypothetical protein DORFOR_01081 [Dorea formicigenerans ATCC
           27755]
 gi|166028797|gb|EDR47554.1| hypothetical protein DORFOR_01081 [Dorea formicigenerans ATCC
           27755]
          Length = 253

 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 57/169 (33%), Gaps = 7/169 (4%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             +  H A+ T+       + ++     +   IN+K+    +      + + + +   V 
Sbjct: 39  AGLPPHAAIATNKISSPFGTALATYRFAKAKLINLKLAAPAVVAAICGSFIGAQISLRVP 98

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVG 176
           +  L+    +   +   L+L +     E                I   + G   G  G G
Sbjct: 99  EHILSYVLMVILPVSAFLVLNKKLFNDEGSEEITLNRRTYLTATIAAFIVGCYDGFYGPG 158

Query: 177 -GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            G        +F   +I  A A +  ++      AL + +Y+G G+  L
Sbjct: 159 TGTFLIIAFTVFAHLNIQTANAQAKVINLTTNLTALAIFLYNGQGVLSL 207


>gi|148261240|ref|YP_001235367.1| hypothetical protein Acry_2253 [Acidiphilium cryptum JF-5]
 gi|326404655|ref|YP_004284737.1| hypothetical protein ACMV_25080 [Acidiphilium multivorum AIU301]
 gi|146402921|gb|ABQ31448.1| protein of unknown function DUF81 [Acidiphilium cryptum JF-5]
 gi|325051517|dbj|BAJ81855.1| hypothetical protein ACMV_25080 [Acidiphilium multivorum AIU301]
          Length = 256

 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 67/204 (32%), Gaps = 20/204 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            ++  F+ G L GL GVGGG VM P+L   F        I    A+GT L   A T  + 
Sbjct: 5   FVLTGFVVGLLIGLTGVGGGSVMTPILVLLF-------GIRASTAIGTDLLFAAFTKAVG 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVT----------SLMISHVDKSFLNKAFAIFCL 135
              H  + T+   ++            +               + +    L         
Sbjct: 58  TAVHGANRTVAWPVVWRLGAGSVPGAALAILLLARLGVHGAAANRLSLLLLGAMLLFAAA 117

Query: 136 LMGILMLKRDRLYCE-RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY--GASI 192
            + +      R      + P  ++    G+V G       VG G    + +++     S+
Sbjct: 118 SLAVKPWVTHRGAGGLHRAPPAWMTIALGIVLGVTVTLSSVGAGALGTVALIYLYPRLSM 177

Query: 193 YKATATSAGVSALIAFPALLVRIY 216
            +   +    + L+   A   R++
Sbjct: 178 REVVGSDIAHALLLTLVAGFGRLW 201


>gi|184201913|ref|YP_001856120.1| hypothetical protein KRH_22670 [Kocuria rhizophila DC2201]
 gi|183582143|dbj|BAG30614.1| hypothetical membrane protein [Kocuria rhizophila DC2201]
          Length = 304

 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 94/262 (35%), Gaps = 26/262 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++ +  F +  + G  G+  G V    L  A  L     S  +H+A          T+
Sbjct: 4   LIVLALVGFGAQLVDGSLGMAYG-VTSSTLLLAAGLTPASVSATVHLAE-------VGTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM- 141
           + S   H R G I+ +++        I     + +++ V         +   LL+G+ + 
Sbjct: 56  LASGFSHWRFGNIDWRVVGFMAVPGGIAAFFGAHLLT-VSGDAAAPVMSTILLLLGVYVV 114

Query: 142 -----LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKA 195
                +   R     + P  ++  +  +  GF+    G G G      +L  G  +  K 
Sbjct: 115 WRFLSIGGRRPSFTGRVPAAFLVPLAAVA-GFMDAIGGGGWGPVGTPTLLASGKIAPRKV 173

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             +      +++  A    + +    N         ++ G V+ +L   +   PLA  L 
Sbjct: 174 IGSIDTSEFVVSLGASAGFLLALGSQN---------IDYGMVVALLIGGVAAAPLAAWLV 224

Query: 256 YMIGKKYLTIGFSMIMFTTSFV 277
            ++  + L IG   ++  T+  
Sbjct: 225 RLLAPRILAIGAGGLIIVTNAR 246


>gi|167037419|ref|YP_001664997.1| hypothetical protein Teth39_1006 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167040086|ref|YP_001663071.1| hypothetical protein Teth514_1446 [Thermoanaerobacter sp. X514]
 gi|300914169|ref|ZP_07131485.1| protein of unknown function DUF81 [Thermoanaerobacter sp. X561]
 gi|307724595|ref|YP_003904346.1| hypothetical protein Thet_1456 [Thermoanaerobacter sp. X513]
 gi|320115832|ref|YP_004185991.1| hypothetical protein Thebr_1032 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|166854326|gb|ABY92735.1| hypothetical protein Teth514_1446 [Thermoanaerobacter sp. X514]
 gi|166856253|gb|ABY94661.1| hypothetical protein Teth39_1006 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|300889104|gb|EFK84250.1| protein of unknown function DUF81 [Thermoanaerobacter sp. X561]
 gi|307581656|gb|ADN55055.1| protein of unknown function DUF81 [Thermoanaerobacter sp. X513]
 gi|319928923|gb|ADV79608.1| protein of unknown function DUF81 [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 117

 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 37/89 (41%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
             + I      H+A   +L    PT++++ + H +   I  KI+   I    I + V ++
Sbjct: 26  PALTIFIGTEQHIAQSVNLFSFIPTAIIALIYHFKSKNIKYKIILLIIIGGMIGSFVGAI 85

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           + +      L K FA+F   MGI      
Sbjct: 86  IAAITKAFILKKIFAVFLFCMGIYEFFSK 114


>gi|319795707|ref|YP_004157347.1| hypothetical protein Varpa_5076 [Variovorax paradoxus EPS]
 gi|315598170|gb|ADU39236.1| protein of unknown function DUF81 [Variovorax paradoxus EPS]
          Length = 252

 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 86/261 (32%), Gaps = 30/261 (11%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +  + I A  L G     FG G G + VP+++ A     +  +  + + +   L ++  
Sbjct: 10  HFYAVAIPAVLLLGISKSGFGAGFGSLAVPLMALAVT---VPQAAAILMPL---LLLMDV 63

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             + +F         +  +LK  I    + TVV +L+   +    +     +F LL    
Sbjct: 64  LGIAAFRR-----DFDRSLLKFLIPFGLVGTVVGTLLFRVLSAHTVAGIVGVFTLLFLAQ 118

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
            L       +   P   V     +V+GF S     GG      ++      +   TAT A
Sbjct: 119 RLV-FPPKPDDPLPSRGVGAALTVVSGFTSFIAHAGGPPINAYVIPLRLKPVVF-TATMA 176

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT----KLSY 256
               ++     +   +            LG +++  +       +   PL      +++ 
Sbjct: 177 YFFFVVNLSKWIPYAW------------LGLIDLRTLAT-SVALMPFAPLGVWVGIRIAR 223

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            I   +      + M  T   
Sbjct: 224 RIDATWFYRFVYLGMLLTGLK 244


>gi|308809936|ref|XP_003082277.1| unnamed protein product [Ostreococcus tauri]
 gi|116060745|emb|CAL57223.1| unnamed protein product [Ostreococcus tauri]
          Length = 321

 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 32/90 (35%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            L+ +   +     +GTSL  + P SV++   H R G +  ++     F   + +   S 
Sbjct: 230 PLLALVTPLPQAAVLGTSLLAMIPPSVVALATHHRMGNVEPRMGAALAFGTALGSAFGSS 289

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
                 +  L   F    L +     +  +
Sbjct: 290 FAVDAPRGALEAMFFFGMLFLSRSTFRALK 319


>gi|326554636|gb|ADZ89275.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 121

 Score = 44.7 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           +G +S L G+G G++ +P +  A +L        + V+   S  +I  T   S   +   
Sbjct: 9   AGLVSALLGIGSGVLKIPAMDTALRL-------PIKVSSAASNFMIGVTGAASAGAYFMR 61

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           G IN  I         +  V  + +++ +    L   F I  +L+ I M
Sbjct: 62  GDINTAIAGPVALGSVLGAVAGARILTGISGDKLRIFFVIVLVLLAIAM 110


>gi|238787383|ref|ZP_04631182.1| hypothetical protein yfred0001_33730 [Yersinia frederiksenii ATCC
           33641]
 gi|238724645|gb|EEQ16286.1| hypothetical protein yfred0001_33730 [Yersinia frederiksenii ATCC
           33641]
          Length = 233

 Score = 44.7 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 58/147 (39%), Gaps = 14/147 (9%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
            ++  + GL G G  L+  PVL+    +  I   + +         V    ++ +   H 
Sbjct: 2   VIAYIIFGLTGFGSALIASPVLALFIPVAKIVPLLAI---------VDMFAAITNVARHS 52

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           RH  I    LK  + ++ I +++ + ++       L  A  IF ++  +  L R +   +
Sbjct: 53  RHADI--AELKRLVPLMIIGSLIGATVLLRTRPDILLLALGIFVIVYAVYALSRRKPQGQ 110

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGG 177
            K         +G++ G  S   G GG
Sbjct: 111 FK---PTAAIPFGLIGGIFSALFGSGG 134


>gi|225872377|ref|YP_002753832.1| hypothetical protein ACP_0714 [Acidobacterium capsulatum ATCC
           51196]
 gi|225793493|gb|ACO33583.1| putative membrane protein [Acidobacterium capsulatum ATCC 51196]
          Length = 242

 Score = 44.7 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 66/190 (34%), Gaps = 15/190 (7%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+ V + ++ TL+ + G GG  V++P L   F +      + +    G            
Sbjct: 9   LLAVVALIASTLAAVTGFGGAAVLLPALVAMFGMRAAIPILTVAQLTG-----------N 57

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +         +N +++  +        ++   + +    + L +    F LL+ +   + 
Sbjct: 58  ASRVWFNRRELNWRVVAWFAAGGIPMALLGGYLFASAPLAGLTRLLGAFLLLVVV--WRH 115

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
            R    R+FP        G  + FLS  LG   G       L YG        T A  + 
Sbjct: 116 LRPGLSRRFPTPAF-AAVGAGSSFLSALLG-SVGPLMAPFFLAYGLVKGAYIGTEALSAV 173

Query: 205 LIAFPALLVR 214
           ++    L+  
Sbjct: 174 VMHVAKLVAY 183


>gi|256830034|ref|YP_003158762.1| hypothetical protein Dbac_2264 [Desulfomicrobium baculatum DSM
           4028]
 gi|256579210|gb|ACU90346.1| protein of unknown function DUF81 [Desulfomicrobium baculatum DSM
           4028]
          Length = 329

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            + ++   + G ++G+FG+G G   VPVL+             + VA+GTS  +++ T  
Sbjct: 212 IMGLLLFIVIGIMAGMFGLGAGWANVPVLNLLMGA-------PLKVAVGTSKFLLSITDT 264

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   +   G +   +    I  L + + V   +++    +F+        L  G   L 
Sbjct: 265 SAAWVYLNQGCVIPLMAIPSIVGLMMGSFVGVRLLAIAKPTFIRYMVIGVLLFAGGKALA 324

Query: 144 R 144
           +
Sbjct: 325 K 325



 Score = 38.9 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 76/224 (33%), Gaps = 36/224 (16%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++   F+ G ++ L GVGGG++ VP++S  F          +    G  L V    ++
Sbjct: 58  VILLFFCFILGIIAVLAGVGGGVLYVPLVSGFFPF-------HLDFVRGAGLLVALAGAL 110

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +     +    ++++      +     ++ + +   +    +        + + IL+L 
Sbjct: 111 AAGPGLLKRNLASLRLALPVALIASSCAILGAFLGLALPNHVIQICLGGTIMGIAILLLL 170

Query: 144 RDRLYCERKFPDNYVKYIWG----------------------------MVTGFLSGALGV 175
                       + +    G                            +V G ++G  G+
Sbjct: 171 SKNTARPVVEKQDALSMALGMRGAYMEPATGEIVEWKTHRTIMGLLLFIVIGIMAGMFGL 230

Query: 176 GGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           G G     ++ L  GA +  A  TS  + ++    A  V +  G
Sbjct: 231 GAGWANVPVLNLLMGAPLKVAVGTSKFLLSITDTSAAWVYLNQG 274


>gi|88798878|ref|ZP_01114460.1| hypothetical protein MED297_12507 [Reinekea sp. MED297]
 gi|88778358|gb|EAR09551.1| hypothetical protein MED297_12507 [Reinekea sp. MED297]
          Length = 255

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 91/247 (36%), Gaps = 25/247 (10%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M     +   + + L+   + L+G +  + G GGGL+ +P L            +    A
Sbjct: 1   MEMQPVELSSELLMLLFAVALLAGWIDAIAG-GGGLIALPTLMLV--------GLSPVQA 51

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           + T+       ++ + +   +   +    L   + +  I   + +L+I  VD  +L+ A 
Sbjct: 52  LATNKCQGFVGTLTATLTLLQRRQLPKTGLPVLMLMTAIGAALGTLLIQMVDTRWLSWAV 111

Query: 131 AIFCLLMGILMLKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVG-GGIFTNLLML 186
            +  + + +  L    L  + K P             + GF  G  G G G  F    ++
Sbjct: 112 PVLLISVALYFLLVPGLGEQEKKPRMSERLWSRTAIPLIGFYDGFFGPGTGSFFAASGVM 171

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
             G ++ +AT  +  ++      +L++  + G             V   A  +++   ++
Sbjct: 172 LRGKTLVQATVVAKPLNFTSNIISLVLFAFGGQ------------VVWLAGGVMMLGQMI 219

Query: 247 ITPLATK 253
              L T+
Sbjct: 220 GAYLGTR 226


>gi|222099281|ref|YP_002533849.1| Putative uncharacterized protein precursor [Thermotoga neapolitana
           DSM 4359]
 gi|221571671|gb|ACM22483.1| Putative uncharacterized protein precursor [Thermotoga neapolitana
           DSM 4359]
          Length = 251

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 100/258 (38%), Gaps = 25/258 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L  +   L+G L+ + G GG ++ +P+L+           + + VA GT+   I 
Sbjct: 9   LTVLFLAFLGGILAGFLNVMAG-GGSMITLPILTAL--------GLGIDVANGTNRIAII 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++++    R    +  K             +V S +   ++K  L +   +  L+M  
Sbjct: 60  LQNLVAIERFRSKNVLKAKEALLVSIPTIAGALVGSSVAVQIEKEVLQRIVGVIFLVMAF 119

Query: 140 LMLKRDR-LYCERKFPDNYVK-YIWGMVTGFLSGALGVGGGI-FTNLLMLFYGASIYKAT 196
            ++ + +    +R+   N++  YI   + G   G +  G G      + L  G  + K  
Sbjct: 120 SLVWKPKIWVEDREVKRNWILIYIVFFLIGIYGGFIQAGVGFLLIPAIALLLGYELVKTN 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A    + A     +L++   +G             VN+   L++   ++    +A   S 
Sbjct: 180 AVKVFIVASYNLVSLIIFFLNGK------------VNVPYGLVLAFGNMTGAWIAASFSV 227

Query: 257 MIGKKYLT-IGFSMIMFT 273
             G +++  I F+ ++  
Sbjct: 228 KKGARWVRWIVFAAVIVV 245


>gi|21674643|ref|NP_662708.1| hypothetical protein CT1829 [Chlorobium tepidum TLS]
 gi|21647846|gb|AAM73050.1| conserved hypothetical protein [Chlorobium tepidum TLS]
          Length = 265

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 57/127 (44%), Gaps = 12/127 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +   ++A    G ++ L GV GG +++PV+   F          + +A   SL V  PT
Sbjct: 144 LMTTGVIAGLGIGIVAALLGVAGGELLIPVIVFLFGAD-------IKLAGSLSLAVSLPT 196

Query: 82  SVMSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHV----DKSFLNKAFAIFCLL 136
            ++SF  + +  + + +   K ++ ++ I ++  + + S +      S+L    A   L+
Sbjct: 197 MLVSFARYSKDSSFVVLGANKSFVLIMAIGSIAGAWLGSRLLGIVPDSYLLPMLAAILLI 256

Query: 137 MGILMLK 143
             + + K
Sbjct: 257 SALKVWK 263


>gi|115525977|ref|YP_782888.1| hypothetical protein RPE_3982 [Rhodopseudomonas palustris BisA53]
 gi|115519924|gb|ABJ07908.1| protein of unknown function DUF81 [Rhodopseudomonas palustris
           BisA53]
          Length = 262

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 71/216 (32%), Gaps = 17/216 (7%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           HVA+GT    ++  +  +F+ H     +  +    +  V  +  V+ S +   +D   L 
Sbjct: 44  HVALGTGALAVSVNAYANFISHALKKHVVWRCALVFASVGTVGAVIGSTIGKLMDGQALL 103

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI-----WGMVTGFLSGALGVGGGIFTN 182
             F I   ++  LML+   +        N    I                   GG +   
Sbjct: 104 FLFGIVMAIIAGLMLRPRTITAATAPIINLRLCIQAGLAALAAGAASGLFGIGGGFLIVP 163

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF-VNIGAVLIIL 241
            L+L  G +   A  TS            +    SG     L  W +      G ++  +
Sbjct: 164 ALILSTGMTTLNAVGTSLLAVGTFGLATAINYSLSG-----LVDWRIAAEFLAGGLVGGI 218

Query: 242 PISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             ++L   L         K  L   F++++FT +  
Sbjct: 219 GGTLLAARLGA------SKSTLNRIFAIVVFTVAAY 248


>gi|269125274|ref|YP_003298644.1| hypothetical protein Tcur_1020 [Thermomonospora curvata DSM 43183]
 gi|268310232|gb|ACY96606.1| protein of unknown function DUF81 [Thermomonospora curvata DSM
           43183]
          Length = 325

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 85/278 (30%), Gaps = 51/278 (18%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +   + + SFL   + GL G+GGG +M P+L   F        +    A+ + L   A
Sbjct: 1   MHFDYAMALGSFLVAIVIGLTGMGGGALMTPMLVTFF-------GVSPLTAVSSDLVAAA 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-DKSFLNKAFAIFCLLMG 138
               +    H R GTI+M+++               L+   + D   +         +  
Sbjct: 54  VMKPVGSAVHYRRGTIDMRLVGWLCVGSVPAAFCGVLVARALGDGEEVQDVIRNAMGVAL 113

Query: 139 ILMLKRDRLYCERKFPDNYVK-----------------------------YIWGMVTGFL 169
           ++      +   +   D   +                              + G + G +
Sbjct: 114 LIAAAGLAVRIYQAMVDRAARHPKARRRTAEPGEPAAVEPPEIKVRPIPTALVGAIGGLV 173

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKA--TATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            G   VG G    + +L    ++       T    +  + F A L  +            
Sbjct: 174 VGITSVGSGSLIIVGLLALYPTLKANQLVGTDLLQAVPLVFSAALGHLL----------- 222

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
             G  ++   L +L  SI    L +++S       +  
Sbjct: 223 -FGDFHLEVTLALLAGSIPGVYLGSRISSRAPGGLIRR 259



 Score = 38.1 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/136 (12%), Positives = 42/136 (30%), Gaps = 6/136 (4%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +   + G + G+  VG G +++  L   +  +  +        +GT L    P    + 
Sbjct: 164 ALVGAIGGLVVGITSVGSGSLIIVGLLALYPTLKANQL------VGTDLLQAVPLVFSAA 217

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           + H   G  ++++    +        + S + S      + +  A+  L   + M     
Sbjct: 218 LGHLLFGDFHLEVTLALLAGSIPGVYLGSRISSRAPGGLIRRLLALVLLASALKMFGLGP 277

Query: 147 LYCERKFPDNYVKYIW 162
                         + 
Sbjct: 278 TAMAWSLLGAIAAAVA 293


>gi|239994488|ref|ZP_04715012.1| hypothetical protein AmacA2_08374 [Alteromonas macleodii ATCC
          27126]
          Length = 61

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 30/54 (55%)

Query: 20 VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
          +  I  +      +G L+G+ GVGGG+V+VPVL   FQ +G+     M +A  T
Sbjct: 8  LTVILSLAGTGVFAGILAGMLGVGGGIVIVPVLFFLFQALGVSPESAMVIATAT 61


>gi|227356992|ref|ZP_03841364.1| protein of hypothetical function DUF81 [Proteus mirabilis ATCC
           29906]
 gi|227162870|gb|EEI47829.1| protein of hypothetical function DUF81 [Proteus mirabilis ATCC
           29906]
          Length = 262

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 83/215 (38%), Gaps = 25/215 (11%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
               I+      G +    GVGGG++++P+L+  F +  +       +A+ T+  +    
Sbjct: 2   LFITILAVGAAIGLIISTTGVGGGVIVLPILTYFFGMNAL-------MAVATANLLSMLM 54

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------------SFLNKA 129
            V S   H R G I  K     + ++  +T + SL+++++              + L  A
Sbjct: 55  KVTSSYMHFRLGNIPFKRAMIVLAIMLPSTFLASLLVNYLGSLTQYQQQVEWGINALVVA 114

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML--- 186
             IF L + I  +        ++        I  ++   ++  + +G       +++   
Sbjct: 115 AIIFSLFLFIQRMFFSSPVIAKQITPLAPLNIKALLLPAIAAGVVLGATGVGGGVVVLPL 174

Query: 187 ---FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
              +   SI +A  TS   + L++  + L  +  G
Sbjct: 175 LLRYANLSIKQAIGTSIFTTTLLSGSSALAYMQDG 209


>gi|152982113|ref|YP_001352545.1| hypothetical protein mma_0855 [Janthinobacterium sp. Marseille]
 gi|151282190|gb|ABR90600.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 248

 Score = 44.3 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 76/256 (29%), Gaps = 22/256 (8%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
                IIV    +G + GL G   G+        +F   G+D        +  SL V   
Sbjct: 3   SIYIFIIVGGIAAGFVQGLSGFAFGMTA-----MSFWAWGMDPV------IAASLAVFGA 51

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +             + ++L  +     I   V  L++  +D            ++    
Sbjct: 52  LTGQIIAAFTVKRGFDWQLLLPFFVGGAIGIPVGVLLLPLLDMDMFKALLGAILIIWCPS 111

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           ML   R   + +        + G++ G +SG  G  G I   L     G    K      
Sbjct: 112 MLFVSRF-PKLQPKGRIADGLIGLIGGVMSGFGGFAG-IVPTLWCTLQGMGKDKQRVIIQ 169

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
             +       +L  +Y G     +         +    ++ P  ++ + L  +L + I  
Sbjct: 170 NFNLGALIFTMLAYLYKGIITVTM---------LPYFAVLAPAMLIPSLLGARLYHRISD 220

Query: 261 KYLTIGFSMIMFTTSF 276
                    ++  +  
Sbjct: 221 VAFRRLVLSLLTLSGI 236


>gi|239933623|ref|ZP_04690576.1| hypothetical protein SghaA1_35680 [Streptomyces ghanaensis ATCC
           14672]
 gi|291442011|ref|ZP_06581401.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291344906|gb|EFE71862.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 249

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 8/95 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR-RHGTINMKILKDWIFVL 107
           VP L              M  A+GTSL VI   S+ S         +++  ++  +I   
Sbjct: 157 VPALVTVLSF-------EMQAAVGTSLLVITANSLASLATRSGAAVSLDWAVIGPFIATA 209

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +       + + V    L + FA+  L +   ML
Sbjct: 210 VLGAWDGKRLAAKVSGPRLQRVFAMVLLAVAAFML 244



 Score = 40.8 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 66/232 (28%), Gaps = 20/232 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L         +       A   SL ++   S+ +     R G +  K    +     
Sbjct: 30  VPALIYLLGFTPAE-------ATTASLVIVTVISLTALYARARAGNVRWKAGAAFAAAGI 82

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL--YCERKFPDNYVKYIWGMVT 166
           +   +     +H+ ++ L  AFA    +    ML+                       + 
Sbjct: 83  LPAALAGAAAAHLPQAVLTLAFAAVASVAAFKMLRPSAPTGTGSGAVRPARAAGAGAGLG 142

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
                    GG +    L+      +  A  TS  V    +  +L  R  +   L+    
Sbjct: 143 ALTGLLGVGGGFLAVPALVTVLSFEMQAAVGTSLLVITANSLASLATRSGAAVSLD---- 198

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                     +   +  ++L      +L+  +    L   F+M++   +   
Sbjct: 199 -------WAVIGPFIATAVLGAWDGKRLAAKVSGPRLQRVFAMVLLAVAAFM 243


>gi|197287322|ref|YP_002153194.1| hypothetical protein PMI3517 [Proteus mirabilis HI4320]
 gi|194684809|emb|CAR46887.1| putative membrane protein [Proteus mirabilis HI4320]
          Length = 262

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 83/215 (38%), Gaps = 25/215 (11%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
               I+      G +    GVGGG++++P+L+  F +  +       +A+ T+  +    
Sbjct: 2   LFITILAVGAAIGLIISTTGVGGGVIVLPILTYFFGMNAL-------MAVATANLLSMLM 54

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------------SFLNKA 129
            V S   H R G I  K     + ++  +T + SL+++++              + L  A
Sbjct: 55  KVTSSYMHFRLGNIPFKRAMIVLGIMLPSTFLASLLVNYLGSLTQYQQQVEWGINALVVA 114

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML--- 186
             IF L + I  +        ++        I  ++   ++  + +G       +++   
Sbjct: 115 AIIFSLFLFIQRMFFSSPVIAKQITPLAPLNIKALLLPAIAAGVVLGATGVGGGVVVLPL 174

Query: 187 ---FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
              +   SI +A  TS   + L++  + L  +  G
Sbjct: 175 LLRYANLSIKQAIGTSIFTTTLLSGSSALAYMQDG 209


>gi|168705496|ref|ZP_02737773.1| hypothetical protein GobsU_38548 [Gemmata obscuriglobus UQM 2246]
          Length = 263

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 87/260 (33%), Gaps = 40/260 (15%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +  ++FL+G ++ + G GG L+  P L+               +A GTS   + P S 
Sbjct: 9   VFLCGSAFLAGIMNAVAG-GGTLLTFPALTGVLSA---------AMANGTSTVALLPGSC 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + +R+      + +            + + ++   ++           L   +L + 
Sbjct: 59  AGALGYRKELWECRRFVLRMCAPSLAGGFLGAWLVGE-NQDAFATLVPWLILTAALLFVA 117

Query: 144 -------------RDRLYCERKFPDNYVKYI---WGMVTGFLSGALGVGGGIFTNLLMLF 187
                        RD    E   P    + +   +  +     G  G G GI     + F
Sbjct: 118 QAPLSKWVKSRAARDGAQPEHHEPGRITQALVIGFQFLVATYGGYFGAGIGILMLSALGF 177

Query: 188 YGA-SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
            G   I++  A    ++ALI   +++V +  G             V+   VL++   +  
Sbjct: 178 MGVGDIHRMNAVKTCLAALINAASVVVFVRDGL------------VDWNFVLVMAAAATA 225

Query: 247 ITPLATKLSYMIGKKYLTIG 266
              +  +++  +   Y+   
Sbjct: 226 GGYMGARVARRLPASYVRYA 245



 Score = 39.3 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 7/122 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+I   FL  T  G FG G G++M      A   MG+ D   M+ A+ T L  +   + 
Sbjct: 147 ALVIGFQFLVATYGGYFGAGIGILM----LSALGFMGVGDIHRMN-AVKTCLAALI--NA 199

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S +   R G ++   +            + + +   +  S++  A       +      
Sbjct: 200 ASVVVFVRDGLVDWNFVLVMAAAATAGGYMGARVARRLPASYVRYAVIAIGFGLSAFYFV 259

Query: 144 RD 145
           + 
Sbjct: 260 KK 261


>gi|94310878|ref|YP_584088.1| hypothetical protein Rmet_1940 [Cupriavidus metallidurans CH34]
 gi|93354730|gb|ABF08819.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
          Length = 284

 Score = 44.3 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 61/194 (31%), Gaps = 15/194 (7%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           +  L  D  +     +  A  ++  + G+ G G  L+  PVL+    +  I   + +   
Sbjct: 34  LSALLPDVSLPAYATMSAALAVAYVIFGIAGFGTALMAAPVLAYVMPVAQIVPLLALMDC 93

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
               L +            R     +   L+  +  L I +++ + ++  +    L    
Sbjct: 94  SAALLNLA-----------RDGHAADRTELRRLVPCLLIGSLIGAALLLRIRADLLPAVL 142

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
            +F     I  L   R     + P +     +G+V G  S   G  GG    + +     
Sbjct: 143 GVFVTAYAIWSLLGKRP--ATRLPSSAA-VPFGLVGGICSAMFG-SGGFLYAIYLSSRLD 198

Query: 191 SIYKATATSAGVSA 204
                   S  +  
Sbjct: 199 KDAMRVTQSTLIGL 212


>gi|254419607|ref|ZP_05033331.1| hypothetical protein BBAL3_1917 [Brevundimonas sp. BAL3]
 gi|196185784|gb|EDX80760.1| hypothetical protein BBAL3_1917 [Brevundimonas sp. BAL3]
          Length = 335

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 80/250 (32%), Gaps = 20/250 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
                   L   ++GL   GGG V  PVLS        D    M       +  +  TS 
Sbjct: 36  WYYPAIMVLGAFVAGLTPEGGGAVAFPVLSVFL-----DIDRGMARDFSLMIQSVGMTSA 90

Query: 84  MSFMEHRRHGTI-NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             ++  R+   + +   +  ++ V  +  V    ++  +    +   F    +   +  +
Sbjct: 91  SIWILSRKQNRLASYAPVLWFVPVAFLGFVFGMNVMQGIPVYIIQALFLSLIMTFALAYI 150

Query: 143 KRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGG-GIFTNLLMLFYGASIYKAT 196
                    + P     D  +        G  +   G G   +   LL+  +      AT
Sbjct: 151 ASKHRGHRDRLPNTGRLDKLMLAAILFAGGVCASLFGTGADIVLYTLLVTRFRMDEKIAT 210

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S  V A I+    L   Y  +   G+  +      +   L   P+ +L+ PL + +  
Sbjct: 211 HQSIMVMAAISV---LGYGYRAFWDQGITDY-----QVRTWLCAYPVVLLMAPLGSYVLS 262

Query: 257 MIGKKYLTIG 266
            +   ++  G
Sbjct: 263 KLKIDWMLRG 272


>gi|317969282|ref|ZP_07970672.1| hypothetical protein SCB02_07101 [Synechococcus sp. CB0205]
          Length = 266

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 7/117 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L++    L G L+G+ GVGGG  +VP L            + M +A GTSL +IA  ++
Sbjct: 131 ALLLPQGLLVGLLTGIAGVGGGFAIVPALVLL-------AGLPMALASGTSLLLIAVNAL 183

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           ++          ++ +L   +       V    +  H+    L + F++  +   +L
Sbjct: 184 VALAALGHWPQASLPLLLPLLAGGAAGAVAGQWLAPHLSDRHLRRGFSLLLIASAVL 240



 Score = 43.1 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 12/163 (7%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
            G GG ++++P+L           ++    A+  SL V+   ++ +   + R G    + 
Sbjct: 21  LGAGGSILLLPLLVS-------GAALPTKEAVPLSLIVVMILALANLGPYLRRGQFAPRP 73

Query: 100 LKDWIFVLPITTVVTSLM--ISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY 157
                      + +         + ++     FA   +L   L+L+        +     
Sbjct: 74  ALLLGLPALAGSWIGGSWVKAGLIPEAVQLSVFAAAAVLASWLLLRP--APAGGRAASEA 131

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATS 199
           +    G++ G L+G  GVGGG      ++   G  +  A+ TS
Sbjct: 132 LLLPQGLLVGLLTGIAGVGGGFAIVPALVLLAGLPMALASGTS 174


>gi|50084783|ref|YP_046293.1| hypothetical protein ACIAD1625 [Acinetobacter sp. ADP1]
 gi|49530759|emb|CAG68471.1| conserved hypothetical protein; putative membrane protein
           [Acinetobacter sp. ADP1]
          Length = 257

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 83/271 (30%), Gaps = 35/271 (12%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++++   + G L G+ G GGG++ VP L              +  A    L  +   +
Sbjct: 1   MWILVLEGSVIGLLLGMTGAGGGILAVPALML-------SQGWTVSQAAPVGLLAVTLAA 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++   E      +  K                  +   V   +L  AF +  L++   + 
Sbjct: 54  MLGASEGLIKKMVRYKAAIWIALFSIPFARYGVHLAGLVSAFWLTIAFCVVMLIVAYRVF 113

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG----------------IFTNLLML 186
              +L+  +  P          +    +  +  G G                +    L  
Sbjct: 114 FN-KLHDVQNPPCKINPSTGQFIWNLQTALVLGGLGMMAGLLTGLLGVGGGFVIVPALRK 172

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
               ++    ATS  +  L+   ++ +   +G+              +   +  +   +L
Sbjct: 173 VTNLNMQSIVATSLMIIFLVGGVSIAIHAVNGFDYP-----------LEITMGFIGACML 221

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                  +S  I  + +   F++++F  +  
Sbjct: 222 GMLCGRLISRSIQVQTVQRIFALVVFVIAIY 252


>gi|299771428|ref|YP_003733454.1| hypothetical protein AOLE_15970 [Acinetobacter sp. DR1]
 gi|298701516|gb|ADI92081.1| hypothetical protein AOLE_15970 [Acinetobacter sp. DR1]
          Length = 252

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 94/254 (37%), Gaps = 23/254 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++++    S  + G+ G G  L+  PVL     L  I   + +         +    +
Sbjct: 12  LSIMLITIVFSYIIFGMVGFGTALIASPVLLNFLPLSQIIPLLAL---------LDMFAA 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + ++  +    +   LK  I ++ + + +  +++  V+ S+   AF IF LL  I  L
Sbjct: 63  ISNVIKDGKKA--DFSELKFLIPLMFVGSFLGFILLMRVNASYALLAFGIFTLLYAIYSL 120

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +   +    +    + +G+  GFL    G GG ++   L              +  +
Sbjct: 121 SGFKPQKK---LEKKFVFPFGLSGGFLGAMFGSGGFLYAIYLNGRIETPEKIRVTQTTLI 177

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
                F  +L      +  + L   +L F+         P  ++   +  +++  + K+ 
Sbjct: 178 GCSTVFRVILFTTAGVYFSDNLFSLALLFI---------PSMLIGAFIGKRITLKLSKQQ 228

Query: 263 LTIGFSMIMFTTSF 276
                ++I+  +  
Sbjct: 229 FLKIINVIVLLSGI 242


>gi|254561076|ref|YP_003068171.1| hypothetical protein METDI2640 [Methylobacterium extorquens DM4]
 gi|254268354|emb|CAX24296.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
          Length = 267

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 44/125 (35%), Gaps = 6/125 (4%)

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD 155
           +  ++ + +          +   + +    L +  A+  +++ ++++     +       
Sbjct: 82  HWMVIVNLLAGSLAGAWFGAGWATRLRSETLYRIIAVLLVMIAVVLVVGHYAHDGGHPLL 141

Query: 156 NYVKYI-----WGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFP 209
                I      G+V G ++  LGV GG +    L+L +G  I  A + S  VS      
Sbjct: 142 TGTAQIVAGVMAGVVIGVVAALLGVAGGELLIPTLVLLFGCDIRLAGSLSLAVSLPTMLM 201

Query: 210 ALLVR 214
                
Sbjct: 202 GFTRY 206



 Score = 40.1 bits (93), Expect = 0.38,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 12/126 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   ++A  + G ++ L GV GG +++P L   F          + +A   SL V  PT 
Sbjct: 147 IVAGVMAGVVIGVVAALLGVAGGELLIPTLVLLF-------GCDIRLAGSLSLAVSLPTM 199

Query: 83  VMSFMEHRRHGTI-----NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +M F  + R  +      N   +        + T + + ++  V  S L    A+  LL 
Sbjct: 200 LMGFTRYSRDSSFSVLGHNKAFVLIMAIGSIVGTFIGAQLLGVVPSSVLLPLLAVILLLS 259

Query: 138 GILMLK 143
            + + +
Sbjct: 260 AVKVWR 265


>gi|269839739|ref|YP_003324431.1| hypothetical protein Tter_2721 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269791469|gb|ACZ43609.1| protein of unknown function DUF81 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 254

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 35/97 (36%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G   G  GV  G   V         M +   + M +A+GTSL  IA  +    + H   G
Sbjct: 138 GVTGGAVGVLTGFFGVGGGFVILPAMVLAADLPMKLAVGTSLLAIALQAAWGVVGHLGLG 197

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           T+   +   ++       +V   + + +      + F
Sbjct: 198 TVAWGVTLPFLVGSIAGGLVGGRLAALIPPRLATRGF 234



 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 80/227 (35%), Gaps = 24/227 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP+L               H A  TSL V+  T+ ++ ++  R G  +      +  
Sbjct: 27  ILAVPLLVYVL-------GEDPHSATTTSLLVVGWTAAVAAVQQLRMGRTSPCAGLIFGG 79

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK----FPDNYVKYI 161
           +   + ++ + +   V    L   FA+  L     M ++     +              +
Sbjct: 80  IGGASALLGAWLNRLVSGQALMCLFALLMLAAAFGMSRKRLPVDKENEFKCQDRAVRLGV 139

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
            G   G L+G  GVGGG      M+      +  A  TS    AL A   ++  +     
Sbjct: 140 TGGAVGVLTGFFGVGGGFVILPAMVLAADLPMKLAVGTSLLAIALQAAWGVVGHL----- 194

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
                   LG V  G  L  L  SI    +  +L+ +I  +  T GF
Sbjct: 195 -------GLGTVAWGVTLPFLVGSIAGGLVGGRLAALIPPRLATRGF 234


>gi|254425796|ref|ZP_05039513.1| hypothetical protein S7335_363 [Synechococcus sp. PCC 7335]
 gi|196188219|gb|EDX83184.1| hypothetical protein S7335_363 [Synechococcus sp. PCC 7335]
          Length = 191

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 41/106 (38%), Gaps = 9/106 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L            +    A+  SL ++   S++  + + R G ++ +I+  +     
Sbjct: 30  VPILVYVM-------GVGSRGAIAMSLFIVGCVSLLGVIPYARQGHVSWQIVAGFTPAAM 82

Query: 109 ITTVVTSLMIS--HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           +   + + ++    +  +     F +  L   +LM+ +     +R 
Sbjct: 83  VGAYLGTQLVKLPFITDAVQLVCFGLVMLAASLLMITKGSSRPKRP 128


>gi|94500495|ref|ZP_01307026.1| hypothetical protein RED65_15533 [Oceanobacter sp. RED65]
 gi|94427285|gb|EAT12264.1| hypothetical protein RED65_15533 [Oceanobacter sp. RED65]
          Length = 247

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 66/200 (33%), Gaps = 20/200 (10%)

Query: 83  VMSFMEHRRHGTINMKIL-KDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG--- 138
           + S + +R    I+ ++L +  +  + + T     +  +++   + +AF +  +      
Sbjct: 54  MTSVLAYRNRQNIDRELLIRVIMPGMLLGTATGYFIAPYLNDVIMKQAFGVLIVWFAARE 113

Query: 139 -ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
              M  R        +    + Y  G+  G  +      GG      +     +  +  A
Sbjct: 114 LWRMFHRHEDKARPLWKTRAITYGAGITHGLFAS-----GGPLLVYAVAGTKINKARFRA 168

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T   V   + F   +  +  G               +  VL  +P+  +   L   L   
Sbjct: 169 TMVFVWFTLNFLLTIAFLADGSLQPV----------LINVLFYIPVLFMAVKLGNFLHER 218

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           + +++  +G   ++  T  +
Sbjct: 219 VDERHFKMGVYWLLLLTGVI 238


>gi|40056977|dbj|BAD05156.1| hypothetical protein [Synechococcus sp. PCC 7942]
          Length = 170

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 7/100 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
             +VP L            +    A+GTSL +I   ++   M +    ++   +   +  
Sbjct: 76  FAIVPALVLL-------GKVPTRKAIGTSLVIIGLNAIAGLMGYWGRLSLPWGLTLTFAA 128

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              + T++   +   +    L ++FA+  L +G  +L R 
Sbjct: 129 SACLGTLLGGAVSQRLSTQGLQRSFALLLLAIGGFVLARS 168



 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 32/97 (32%), Gaps = 12/97 (12%)

Query: 179 IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
                L+L       KA  TS  +  L A   L+      WG   LP         G  L
Sbjct: 77  AIVPALVLLGKVPTRKAIGTSLVIIGLNAIAGLMGY----WGRLSLP--------WGLTL 124

Query: 239 IILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                + L T L   +S  +  + L   F++++    
Sbjct: 125 TFAASACLGTLLGGAVSQRLSTQGLQRSFALLLLAIG 161


>gi|239933318|ref|ZP_04690271.1| hypothetical protein SghaA1_34153 [Streptomyces ghanaensis ATCC
           14672]
          Length = 248

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 57/165 (34%), Gaps = 8/165 (4%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L        +        A   SL ++  TSV +   H R G +  +    +     
Sbjct: 30  VPALIYLLGFTPVA-------ATTASLVIVVFTSVTALSAHARDGHVRWRTGLLFAAAGI 82

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGF 168
              ++   +   + ++ L  AFA       + ML+   L               G   G 
Sbjct: 83  GPAMLGGALAGRLPEAALTAAFAGVAAAAALRMLRTRPLADTAAPVRPGRAAAAGAGLGA 142

Query: 169 LSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALL 212
           ++G LGVGGG      ++   G  +  A  TS  V  + +   L+
Sbjct: 143 VTGVLGVGGGFLAVPALVGVLGLRMRDAVGTSLLVITVNSLATLV 187


>gi|258544866|ref|ZP_05705100.1| inner membrane protein YfcA [Cardiobacterium hominis ATCC 15826]
 gi|258519889|gb|EEV88748.1| inner membrane protein YfcA [Cardiobacterium hominis ATCC 15826]
          Length = 256

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 85/237 (35%), Gaps = 25/237 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + L+ +   ++G +  L G GGG++ +P L     L G+        A+ T+    +  
Sbjct: 11  ILALLTLVGIVAGFVDTLAG-GGGMLTIPSLL----LAGLPPDA----ALATNKLQGSCG 61

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS---FLNKAFAIFCLLMG 138
           ++++     + G I  + L   I    +     +L + ++ K               L+ 
Sbjct: 62  TLLATWYFVKRGQIQFRRLLPGIAACALGAACGTLTVQYLPKEALQQALPLLLAVVALIF 121

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATA 197
           I M     +  E + P         +  GF  G LG G G  F   L+   G ++  AT 
Sbjct: 122 IFMPSLGSVAREARLPYGKFALAAALPIGFYDGFLGPGTGSFFMLALISLRGYTLQNATI 181

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
            +   +A     +LLV +  G             +   A + +    IL   LA  L
Sbjct: 182 EAKAYNATTNLVSLLVFLIGGK------------IVWLAGVAMAVGQILGARLAAGL 226


>gi|11499224|ref|NP_070461.1| hypothetical protein AF1632 [Archaeoglobus fulgidus DSM 4304]
 gi|2648914|gb|AAB89606.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 334

 Score = 44.3 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 50/117 (42%), Gaps = 7/117 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L ++A    G L+G+FG+G G   VP+L+           + +  A+ +S+ ++A   
Sbjct: 210 LPLAMLAFSGVGFLAGMFGLGAGWANVPILNLVM-------GLPLKAAVASSMLILAIND 262

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S   +  +G +   ++   +  + I + + S + +      + +       L G+
Sbjct: 263 SASLWVYLANGAVLPIVVVPVVLGISIGSRIGSRLAAKTKPKVIKRLVIALIALSGV 319


>gi|167563862|ref|ZP_02356778.1| hypothetical protein BoklE_15005 [Burkholderia oklahomensis EO147]
          Length = 264

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 86/277 (31%), Gaps = 37/277 (13%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++    L  ++    G L GL GVGGG +M P+L   F       ++    A+GT L   
Sbjct: 3   LLHIDPLYSLSGLFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYA 55

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI------SHVDKSFLNKAFAI 132
           A T       H   GT+  +I             +T   +      S      +      
Sbjct: 56  ALTKATGTFVHGLKGTVEWRITGRLAAGSVPAAAITLWFLHAHGMHSQETSRMIQFVLGA 115

Query: 133 FCLLMGILMLKRDRLY----------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
             LL  + +L R +L                       + G V G L     VG G    
Sbjct: 116 ALLLTSLSLLFRPQLAAFAARRTRALPPSPTRTLAATVLTGAVLGVLVSLTSVGAGAIGV 175

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
            ++L      S  +   +    +  +   A +              W LG V+   ++ +
Sbjct: 176 TVLLLLYPTLSTTRIVGSDIAHAVPLTLVAGVG------------HWMLGSVDWSILVSL 223

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L  S+    + + LS    +  L    + ++      
Sbjct: 224 LIGSVPGIVVGSHLSARAPEGLLRRILATMLVAVGAK 260



 Score = 43.1 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 6/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  L  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 153 VLTGAVLGVLVSLTSVGAGAIGVTVLLLLY------PTLSTTRIVGSDIAHAVPLTLVAG 206

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + H   G+++  IL   +       VV S + +   +  L +  A   + +G  ++  
Sbjct: 207 VGHWMLGSVDWSILVSLLIGSVPGIVVGSHLSARAPEGLLRRILATMLVAVGAKLVLS 264


>gi|269119846|ref|YP_003308023.1| hypothetical protein Sterm_1224 [Sebaldella termitidis ATCC 33386]
 gi|268613724|gb|ACZ08092.1| protein of unknown function DUF81 [Sebaldella termitidis ATCC
           33386]
          Length = 255

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 101/272 (37%), Gaps = 31/272 (11%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
           F S D  V ++ L+    F+          GGGL+ +P              +    A+ 
Sbjct: 2   FHSIDNFVPFVLLLFAGGFIDSIAG-----GGGLLTLPAYLL--------TGLPTVSALA 48

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           T+       +  SF+ + +H  +++K+LK  +      +++ S +++ +   FLN A   
Sbjct: 49  TNKFSSIFGTFGSFLGYLKHNKLHLKLLKFLVPASFAGSMLGSFIVTKIKADFLNAAIPF 108

Query: 133 FCLLMGILMLKRDRL--YCERKFPDNYVKY---IWGMVTGFLSGALGVGGGIFTNLLML- 186
             L +G+  L    L      K P   V      +  + GF  G  G G G F  ++++ 
Sbjct: 109 LILGVGLYSLFNKSLGGVSMYKHPKKAVLTKGIFFTFLVGFYDGFFGPGAGTFFIVMLIK 168

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
            +     +A+  +  ++      A  + + +G             VN    LI     +L
Sbjct: 169 IFSVDFLEASGNTKLLNFASGLSAFFIFLINGK------------VNFFYGLIGTVAILL 216

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            +   TKL+   G  ++   F  + F  +   
Sbjct: 217 GSLAGTKLAIKKGVPFIRPVFLSVSFIIAIKM 248


>gi|154496880|ref|ZP_02035576.1| hypothetical protein BACCAP_01173 [Bacteroides capillosus ATCC
           29799]
 gi|150273838|gb|EDN00951.1| hypothetical protein BACCAP_01173 [Bacteroides capillosus ATCC
           29799]
          Length = 258

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 14/180 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V+ P+L     +   D       A+G +L      S  S   + + G +++K     + 
Sbjct: 31  TVISPMLVTFLGIPAYD-------AIGIALASDVLASAASARTYAKSGALDIKNGLVMMC 83

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY----- 160
            +   T+V S + + V  + L     +  L++G+  L        R       +      
Sbjct: 84  GVLTMTLVGSWLSTFVPNTTLGSFSVVMTLILGLRFLIFPVTSTRRTLSGASTQARIVKG 143

Query: 161 -IWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
              G   G + G  G GGG+   +++    G  +  A  TS  V    A    +     G
Sbjct: 144 AAGGACIGLVCGFFGAGGGMMMLMVLTVLLGYELKTAVGTSVFVMTFSALTGAVSHFALG 203


>gi|14591152|ref|NP_143228.1| hypothetical protein PH1345 [Pyrococcus horikoshii OT3]
 gi|3257768|dbj|BAA30451.1| 242aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 242

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 103/260 (39%), Gaps = 22/260 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++Y+ L +++ F+   +  + GVG  + +VPV++           + +  A  T L +  
Sbjct: 1   MNYVELALIS-FILSVIFSIGGVGSAIAIVPVMAWL--------GVPLMTAKPTGLFINT 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            + + + +++ +HG + +K+    + V  +   + +     + + ++   F  F +  G 
Sbjct: 52  LSMLSATVKNLKHGKLELKLGLPILLVATMVAPLGAYTGKFIPRRYIFLIFMAFLVYSGT 111

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
           ++L                  + G + GFL G LGVGGG   +  ++  G    K  AT+
Sbjct: 112 MLLFFKPRKRAENGNHLVEGSVIGGIAGFLGGLLGVGGGGIISPALIMLGYEPKKVAATT 171

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY-MI 258
           A V    +    L              W +G +++  +  +   ++    + T L +  +
Sbjct: 172 ALVVFFSSLSGFLTY------------WGMGTLDLRLLAWVSISALAGGWIGTHLMHFKM 219

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
             + +     MI++      
Sbjct: 220 SSEQVKKAIGMILYLMVVKM 239


>gi|256829680|ref|YP_003158408.1| hypothetical protein Dbac_1901 [Desulfomicrobium baculatum DSM
           4028]
 gi|256578856|gb|ACU89992.1| protein of unknown function DUF81 [Desulfomicrobium baculatum DSM
           4028]
          Length = 247

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 84/216 (38%), Gaps = 11/216 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L I + F +   S LF  GG    V VL      +G+D     ++A    L +   T+
Sbjct: 1   MILYIASFFATLFFSALFATGGMGSSV-VLIPILGFLGVD----FNLAKAVGLFINTTTT 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +   + R   ++   +  ++        + +   S  +  ++  AF IF       + 
Sbjct: 56  STASFLNWRRQLLDFSTITPFLIASVCCAPIGTYCASIWNVEYIKLAFVIFLFFSSAKIF 115

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA-SIYKATATS-- 199
            + R   E      +  +  G+  GFL+G LG+GGG     ++   G   +  A   S  
Sbjct: 116 FKGRTPHEETVKCKWAIFSLGLGVGFLAGLLGIGGGALIVPVLFAMGFSPMQIAINASFM 175

Query: 200 ---AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
              + +SA +++   +   ++  G+  +     GFV
Sbjct: 176 IPFSTLSAFLSYAGFITIDWTLIGVTTIASMLGGFV 211


>gi|124008003|ref|ZP_01692703.1| hypothetical conserved protein [Microscilla marina ATCC 23134]
 gi|123986587|gb|EAY26386.1| hypothetical conserved protein [Microscilla marina ATCC 23134]
          Length = 256

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 1/128 (0%)

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
             H       LK  +  + +  VV + +   + +    +  A   L    +M   DR   
Sbjct: 74  YYHRYTEWHHLKRLLPAMMLGVVVGAWVGKDLPERVFKQMMAAIILATVAMMYWWDRQK- 132

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
            ++ PD++   I   +    +  +G   G FTNL  L           T+A +  LI   
Sbjct: 133 NKQVPDHWWFAIMMGLMAGFTTMIGNLAGAFTNLFFLAMRLPKNNFIGTAAWLFLLINLF 192

Query: 210 ALLVRIYS 217
            L   I++
Sbjct: 193 KLPFHIFA 200


>gi|227506090|ref|ZP_03936139.1| membrane protein [Corynebacterium striatum ATCC 6940]
 gi|227197372|gb|EEI77420.1| membrane protein [Corynebacterium striatum ATCC 6940]
          Length = 262

 Score = 44.3 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 86/262 (32%), Gaps = 25/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++   + ++G +  + G GGGLV++P++      M +   +    A+ T+       + 
Sbjct: 12  AILTSGAAVAGWIDAVIG-GGGLVLIPLI------MAVAPQLAPATALATNKVAAVSGTA 64

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +     R    +   L        + + + +   + +DK  +     +  + +G+ +  
Sbjct: 65  SAAFTLVRKVRPSAAELIRLGLAAMVCSGLGAGAAAMIDKDVMRPLIIVLMVCVGVFVAF 124

Query: 144 RDRLYCERKFPDNYV-----KYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATA 197
           R                            F  G  G G G+F  +     +  +  ++ A
Sbjct: 125 RPSFGTNESEGIRGGWRTCAALGAVACIAFYDGIFGPGTGMFLIMAFTAIFSQNFLRSAA 184

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            S  V+      AL+V I              G +  G  L++   ++L   L  +    
Sbjct: 185 MSKVVNTCTNVGALIVFILG------------GHILWGLALVLAAANVLGAQLGARTVLG 232

Query: 258 IGKKYLTIGFSMIMFTTSFVFA 279
            G K +      ++   S   +
Sbjct: 233 GGTKLIRYALLTLVVVMSIYLS 254


>gi|149279667|ref|ZP_01885796.1| hypothetical protein PBAL39_08440 [Pedobacter sp. BAL39]
 gi|149229703|gb|EDM35093.1| hypothetical protein PBAL39_08440 [Pedobacter sp. BAL39]
          Length = 117

 Score = 44.3 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 57/111 (51%), Gaps = 7/111 (6%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            V+ +  +++  +FL+G +  L G+GGG+V++P+L+ A         + +H A+G S+  
Sbjct: 11  SVLLFTVIVLAGAFLAGLVGSLTGLGGGVVIIPLLTLAL-------GVDIHYAIGASIVS 63

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +  TS  S   + + G  N++I         I+ +V +++  +++   L  
Sbjct: 64  VIATSSGSAAAYVKEGITNIRIGMFLEMATTISAIVGAVITVYIEPVTLRL 114


>gi|159117352|ref|XP_001708896.1| Hypothetical protein GL50803_7706 [Giardia lamblia ATCC 50803]
 gi|157437010|gb|EDO81222.1| hypothetical protein GL50803_7706 [Giardia lamblia ATCC 50803]
          Length = 748

 Score = 44.3 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 38/113 (33%), Gaps = 9/113 (7%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT----INMKILKDWIF 105
           P++         D  +   +A   +  +  P  ++    H+++      +   +L  +  
Sbjct: 37  PLIVLILVFFFADTHVATTIANACACALTLPAFILDAFRHKKYDAFSPLLQWDLLILFQP 96

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLM-----GILMLKRDRLYCERKF 153
              +  +  S+  +      LN    +F +L+       L L +  +  E+  
Sbjct: 97  FSLLGALAGSICNAIFPSWVLNIFVCLFLILVVGKRISYLFLIKSDIEEEKAL 149


>gi|253742614|gb|EES99413.1| Hypothetical protein GL50581_3349 [Giardia intestinalis ATCC 50581]
          Length = 742

 Score = 44.3 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 11/114 (9%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT----INMKILKDWIF 105
           P++         D  + + VA   +  +  PT ++    H+++      +   +L  +  
Sbjct: 37  PLIVSILIFFFADAHVAITVANACTCILTFPTFILDIFRHKKYDALSPLLQWDLLILFQP 96

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLL------MGILMLKRDRLYCERKF 153
              +  ++ S+  +      LN  FA   L+      +  L L R  +  E+  
Sbjct: 97  FTLLGALIGSICNTLFPSWVLN-IFACLLLILVVGKRISYLFLIRSDIEEEKAL 149


>gi|46578549|ref|YP_009357.1| hypothetical protein DVU0132 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46447960|gb|AAS94616.1| membrane protein, putative [Desulfovibrio vulgaris str.
           Hildenborough]
          Length = 374

 Score = 44.3 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 46/290 (15%), Positives = 105/290 (36%), Gaps = 66/290 (22%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I     +G ++G  G GGG ++ P L        +   +   +A+GT L  I   ++M  
Sbjct: 37  IAVGLAAGLITGCIGAGGGFIITPAL--------MAAGVKGILAVGTDLFHIFAKAIMGT 88

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMIS-------HVDKSFLNKAFAIFCLLMGI 139
             H++ G +++K+   ++      T +   +          + + F++  +A+    +G 
Sbjct: 89  TVHKKLGNVSVKLAVFFLIGSGGGTFIGGAINKGLYNKDPLLSELFISTIYAVLLGFLGF 148

Query: 140 LML---------------------------------------KRDRLYCERKFPDNYVKY 160
             L                                         + L    +    ++  
Sbjct: 149 YALYDFIKASRAGGGGDAHGGGSGTTAISVKLQGMNVPPMITFDEDLVPGGRRISGWIVA 208

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
             G+V G L+  +GVGGG  T  + ++             GVS++      +++I    G
Sbjct: 209 AGGVVVGILAAIMGVGGGFVTFPMFVYI-----------FGVSSMTTVGTDILQIIFTAG 257

Query: 221 LNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           L  +  +++ GFV     + +L  S+L   +    + ++   ++   +++
Sbjct: 258 LGAIAQYAIYGFVFYTLAMGMLLGSLLGIQIGALTTKVVKGIHIRGFYAV 307



 Score = 43.5 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 42/118 (35%), Gaps = 8/118 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++     + G L+ + GVGGG V  P+    F        +     +GT +  I  T+ 
Sbjct: 205 WIVAAGGVVVGILAAIMGVGGGFVTFPMFVYIF-------GVSSMTTVGTDILQIIFTAG 257

Query: 84  MSFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +  +     +G +   +    +    +   + +L    V    +   +A+  +   I 
Sbjct: 258 LGAIAQYAIYGFVFYTLAMGMLLGSLLGIQIGALTTKVVKGIHIRGFYAVSIIAGFIN 315


>gi|213416558|ref|ZP_03349702.1| hypothetical protein Salmonentericaenterica_00646 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 167

 Score = 44.3 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 54/139 (38%), Gaps = 16/139 (11%)

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVG 176
           HV    L +   I  + +G+  L   +L  E   R+        I G   GF  G  G  
Sbjct: 1   HVQADILRQILPILVIFIGLYFLLMPKLGEEDRQRRLYGLPFALIAGGCVGFYDGFFGPA 60

Query: 177 GGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
            G F  L  +   G ++ K+TA +  ++A      LL+ I  G  +     W+ GFV   
Sbjct: 61  AGSFYALAFVTLCGYNLAKSTAHAKVLNATSNVGGLLLFIIGGKVI-----WATGFV--- 112

Query: 236 AVLIILPISILITPLATKL 254
               +L    L   + ++L
Sbjct: 113 ----MLVGQFLGARMGSRL 127


>gi|258652766|ref|YP_003201922.1| hypothetical protein Namu_2579 [Nakamurella multipartita DSM 44233]
 gi|258555991|gb|ACV78933.1| protein of unknown function DUF81 [Nakamurella multipartita DSM
           44233]
          Length = 275

 Score = 44.3 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 1/87 (1%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVD 122
              M VA+GTSL VIA  S  S +     G  I+  ++  +     I +++ + +++ V 
Sbjct: 187 DFPMPVAVGTSLLVIAMNSATSLVARAGSGLEIDWTVIALFTGAAVIGSLLGARIVTKVR 246

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRLYC 149
              L  AFA   + +G+    R     
Sbjct: 247 PQTLQIAFAGLIIAVGLYTAARSFPAL 273



 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 86/256 (33%), Gaps = 43/256 (16%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L            +    A   SL ++  T+V+  + HRR G + M     +  V  
Sbjct: 29  VPALVYLV-------GMDTRAATTGSLVIVGVTAVVGMLAHRRDGHVRMLQGVVFGLVGA 81

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT-- 166
              V  + +   V    L   F++  L +  +ML R R+      P    +    +    
Sbjct: 82  AGAVAGTRLSLAVAPEVLLAGFSVLMLAVAGIMLTRRRVPAGSGGPSMAERIPLDVPIIT 141

Query: 167 ----------------------GFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVS 203
                                 G ++G  GVGGG      ++      +  A  TS  V 
Sbjct: 142 FKPRFICACPRAAKVVVAALAVGLMTGFFGVGGGFLVVPALVLALDFPMPVAVGTSLLVI 201

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           A+ +  +L+ R  SG             ++   + +    +++ + L  ++   +  + L
Sbjct: 202 AMNSATSLVARAGSGLE-----------IDWTVIALFTGAAVIGSLLGARIVTKVRPQTL 250

Query: 264 TIGFSMIMFTTSFVFA 279
            I F+ ++       A
Sbjct: 251 QIAFAGLIIAVGLYTA 266


>gi|134301516|ref|YP_001121484.1| hypothetical protein FTW_0440 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134049293|gb|ABO46364.1| hypothetical membrane protein [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 240

 Score = 44.3 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 81/194 (41%), Gaps = 15/194 (7%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
            FL+  +  + G GGGL+ +P LS     ++ +  +     ++GT + V         ++
Sbjct: 2   GFLASFIDAIAG-GGGLISIPALSLTGLPIVTVLGTNKFQASIGTGMAV---------LK 51

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL- 147
           + + G I++K +   +    I     +L+   +   F+N    I  + + I  +    L 
Sbjct: 52  YYKSGLIDIKTVVRGLVAGFIGACCGTLLTLLIHNDFMNNIVPILLIAVFIFSIVNKNLG 111

Query: 148 --YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSA 204
               +++  +     ++G + G   G  G G G    + ++++ G +  +A+  +  ++ 
Sbjct: 112 VAQGKKRMSEVAFFTLFGFILGAYDGFFGPGTGNLWIIAIVYFLGYTFLQASGYAKMLNL 171

Query: 205 LIAFPALLVRIYSG 218
                +L V   SG
Sbjct: 172 KSNVFSLTVFALSG 185


>gi|289578204|ref|YP_003476831.1| hypothetical protein Thit_0999 [Thermoanaerobacter italicus Ab9]
 gi|297544485|ref|YP_003676787.1| hypothetical protein Tmath_1056 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|289527917|gb|ADD02269.1| protein of unknown function DUF81 [Thermoanaerobacter italicus Ab9]
 gi|296842260|gb|ADH60776.1| protein of unknown function DUF81 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 118

 Score = 44.3 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + V  F++G ++GL G GGG ++V  L            I  H A  T++ +I P +++S
Sbjct: 7   LFVIGFITGIINGLLGAGGGTLIVAALVFLL-------GIEDHKAHATAISIILPITLVS 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            + + ++   ++ I  +      I   + +  ++ +    L K F I  L+  + M   
Sbjct: 60  SLVYLQNRITDIPITINIAIGSTIGGFIGAYFLNKISIPLLRKIFGIIMLIASVRMWIS 118


>gi|239978143|ref|ZP_04700667.1| hypothetical protein SalbJ_01810 [Streptomyces albus J1074]
 gi|291450040|ref|ZP_06589430.1| predicted protein [Streptomyces albus J1074]
 gi|291352989|gb|EFE79891.1| predicted protein [Streptomyces albus J1074]
          Length = 270

 Score = 44.3 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 7/103 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L ++A  + G   G  G GG ++ VP L        ++       A    L ++A
Sbjct: 1   MSAVVLALLAGAVVGLALGGMGGGGSVLAVPALVYLLGFSPVE-------ATTAGLVIVA 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
            T+  S   H R G +  +    +     +  V+  L+ + + 
Sbjct: 54  ITTATSLYAHGRDGNVRWRAGLLFAAAGLLPAVLGGLLAARLP 96


>gi|194337346|ref|YP_002019140.1| protein of unknown function DUF81 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194309823|gb|ACF44523.1| protein of unknown function DUF81 [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 318

 Score = 44.3 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    + +    + G ++G+FG+G G   VPV +           + + V++ TS+ V++
Sbjct: 197 IHRTPIGLFLFVVIGFMAGMFGLGAGWANVPVFNLVL-------GVPLRVSVATSIFVLS 249

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
                +   +   G +   I    +  + I T + + +++ V    + + 
Sbjct: 250 INDTAAAWVYLHKGAVLPLIAIPSVAGMMIGTKIGAKLLTKVHTRVVRRL 299


>gi|149186725|ref|ZP_01865036.1| hypothetical protein ED21_29541 [Erythrobacter sp. SD-21]
 gi|148829633|gb|EDL48073.1| hypothetical protein ED21_29541 [Erythrobacter sp. SD-21]
          Length = 245

 Score = 44.3 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 84/239 (35%), Gaps = 17/239 (7%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
            G GGG       +    L G+D  I   +A    L         S     R G    + 
Sbjct: 18  VGFGGGS----TYNALLALSGVDYRILPLIA----LSCNIVVVAGSTARFARAGVTPWRR 69

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK 159
                 +     ++  L  + + +           LL    ML   +   E +     + 
Sbjct: 70  ALQLTAIAAPAALLGGL--TPIGEGTFLTILGASLLLTAATMLLPVKSTDEARGKGAGLV 127

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT-ATSAGVSALIAFPALLVRIYSG 218
            +     G+L+G +G+GGGIF   L+     +  +A  AT++    + +   L  +I+ G
Sbjct: 128 PLAAAPLGYLAGLVGIGGGIFLAPLLHLTRWNHARAIAATASLFILVNSLFGLAGQIFKG 187

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                L  + LG   +  ++ +     + + LA K    + ++++  G +++       
Sbjct: 188 GEGRFLAAFDLG---LPLIVAVAIGGQIGSLLALKF---LPQRWIRWGTALLTAWVGAR 240


>gi|123443640|ref|YP_001007612.1| hypothetical protein YE3446 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090601|emb|CAL13470.1| putative membrane protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 249

 Score = 44.3 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 14/155 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  I     ++  + G+ G G  L+  PVL+    +  I   + +         V    +
Sbjct: 10  MVAIFSTMVIAYIIFGITGFGSALIASPVLALFIPVAKIVPLLAI---------VDMVAA 60

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +   H RH  I    LK  + ++ I +++ + ++       L  A  IF +L  I  L
Sbjct: 61  ITNVARHSRHADI--AELKRLVPLMIIGSLIGATVLLRTRPDILLLALGIFVILYAIYSL 118

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
            R +   + K         +G++ G  S   G GG
Sbjct: 119 NRSKPQKQFK---PTAAIPFGLIGGIFSALFGSGG 150


>gi|119715204|ref|YP_922169.1| hypothetical protein Noca_0959 [Nocardioides sp. JS614]
 gi|119535865|gb|ABL80482.1| protein of unknown function DUF81 [Nocardioides sp. JS614]
          Length = 259

 Score = 44.3 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 57/150 (38%), Gaps = 7/150 (4%)

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           L  I  T++ S   + R    + +     +      +   +++ SH+  +       +  
Sbjct: 55  LASICGTTMSSA-TYYRRIRPDPRTFGPLMLFAFAGSATGAVVASHIPGAAFQPIVLVAL 113

Query: 135 LLMGILMLKRDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FY 188
           +L+G  +L R  L  E               + G+  GF  GALG G G F  + ++   
Sbjct: 114 VLVGGYVLLRPALGEETLLRFAGHRHTAAAMLTGLGIGFYDGALGPGTGSFFVITLVGLL 173

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSG 218
           G S  +A+A +   +      AL V +  G
Sbjct: 174 GYSFLEASAKARLANWATNLAALCVFVPQG 203


>gi|108800979|ref|YP_641176.1| hypothetical protein Mmcs_4015 [Mycobacterium sp. MCS]
 gi|119870119|ref|YP_940071.1| hypothetical protein Mkms_4089 [Mycobacterium sp. KMS]
 gi|126436816|ref|YP_001072507.1| hypothetical protein Mjls_4245 [Mycobacterium sp. JLS]
 gi|108771398|gb|ABG10120.1| protein of unknown function DUF81 [Mycobacterium sp. MCS]
 gi|119696208|gb|ABL93281.1| protein of unknown function DUF81 [Mycobacterium sp. KMS]
 gi|126236616|gb|ABO00017.1| protein of unknown function DUF81 [Mycobacterium sp. JLS]
          Length = 257

 Score = 44.3 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 7/95 (7%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           ++P L            + M VA+GTSL +I   SV     H    T++  ++  ++   
Sbjct: 163 IIPALVVVL-------GVEMSVAVGTSLLIITANSVAGIFSHLGAITVDWTVIAVFVAAA 215

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              ++V   + + VD + L + FA     +   ++
Sbjct: 216 MAASLVAGHLGTKVDTTRLQRWFAYLVFAVAAYVI 250



 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 84/241 (34%), Gaps = 33/241 (13%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L     L GI+ +I +      SL V+A  S +  +   R G +  ++   +     
Sbjct: 29  VPALVYGMGL-GIEQAIPI------SLIVVATASAVGALPKIRAGQVQWRLAGIFAAAGI 81

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD------------RLYCERKFPDN 156
             TV  S +  H+ +  L   FA   +  GI ML               R+   R  P +
Sbjct: 82  PATVAGSAISRHLPQPALMIGFAAVMVFAGIRMLTDQENTGTACEVEAGRVNWRRCAPRS 141

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
               +   +   L G  G    +    L++  G  +  A  TS     LI     +  I+
Sbjct: 142 IGAGLLVGLLTGLFGVGGG--FLIIPALVVVLGVEMSVAVGTS----LLIITANSVAGIF 195

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           S  G           V+   + + +  ++  + +A  L   +    L   F+ ++F  + 
Sbjct: 196 SHLGAIT--------VDWTVIAVFVAAAMAASLVAGHLGTKVDTTRLQRWFAYLVFAVAA 247

Query: 277 V 277
            
Sbjct: 248 Y 248


>gi|116748085|ref|YP_844772.1| hypothetical protein Sfum_0638 [Syntrophobacter fumaroxidans MPOB]
 gi|116697149|gb|ABK16337.1| protein of unknown function DUF81 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 355

 Score = 44.3 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 7/126 (5%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +V  + ++++    +G L+G FGVGGG + VP L               H+A+GT L  I
Sbjct: 178 IVISMWVVVLVGIATGVLAGFFGVGGGFIRVPALVYVVGA-------TTHIAVGTDLLEI 230

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             +     + H   G +++  +   I          S+  S+V    +    +   +L  
Sbjct: 231 VVSGGYGALRHFASGNVDIMAVFFMIIGAMFGAQFGSIATSYVRGPAIRYILSYSLILAT 290

Query: 139 ILMLKR 144
           +    R
Sbjct: 291 VGAFLR 296


>gi|86132489|ref|ZP_01051083.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
 gi|85817050|gb|EAQ38234.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
          Length = 252

 Score = 43.9 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 77/207 (37%), Gaps = 17/207 (8%)

Query: 52  LSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITT 111
           L+   +++G+  +    VA GT+   I      +     ++G +N+   K +I  + I  
Sbjct: 32  LTILTEVLGLPPN----VANGTNRIGIFTQCAATSWVFHKNGRLNIARHKKYIIPIFIGA 87

Query: 112 VVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK----FPDNYVKYIWGMVTG 167
           V   L+  +V        F    L M + +L R + +         P  Y+        G
Sbjct: 88  VAGGLLAINVSNEQFRAVFKFMMLFMLVAVLVRPKRWLRETDLEFRPKWYIYIPLLFALG 147

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV-SALIAFPALLVRIYSGWGLNGLPP 226
           F  G + +G G+F  ++M+     +      S  +   +I    LL  +   +   GL  
Sbjct: 148 FYGGFIQMGMGVFFLIIMVL---GMRMNIIESNALKGFVIGLYTLL--VIGLFHYQGLID 202

Query: 227 WSLGFVNIGAVLIILPISILITPLATK 253
           W LGF+     +       L    ATK
Sbjct: 203 WKLGFIM---AVGQTIGGFLTARFATK 226


>gi|172059797|ref|YP_001807449.1| hypothetical protein BamMC406_0737 [Burkholderia ambifaria MC40-6]
 gi|171992314|gb|ACB63233.1| protein of unknown function DUF81 [Burkholderia ambifaria MC40-6]
          Length = 262

 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 59/268 (22%), Positives = 93/268 (34%), Gaps = 31/268 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  ++    G L GL GVGGG +M P+L   F        +    A+GT L   A T  
Sbjct: 8   LLYSLSGLFVGILVGLTGVGGGSLMTPILVLLF-------GVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI------SHVDKSFLNKAFAIFCLLM 137
              + H   G+I+ +I             VT  ++      S      +     I  LL 
Sbjct: 61  TGTLVHGLKGSIDWRITGRLAAGSVPAAAVTLWVLHTHGVNSPDTARMIQLVLGIALLLT 120

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            + ++ R                    +   + G V G L     VG G     ++L   
Sbjct: 121 SLALIFRPQLTALAARNPLAPSPARTLWSTVLTGAVLGVLVSMTSVGAGAIGVTVLLL-- 178

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +Y A AT+  V + IA    L        + G+  W LG V+   +L +L  S+    
Sbjct: 179 --LYPALATTRIVGSDIAHAVPLTL------VAGMGHWLLGSVDWSMLLSLLLGSLPGIV 230

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L + LS    ++ L    +  +      
Sbjct: 231 LGSLLSARAPERLLRNLLAATLVAVGVR 258



 Score = 39.7 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 49/117 (41%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  +  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 151 VLTGAVLGVLVSMTSVGAGAIGVTVLLLLY------PALATTRIVGSDIAHAVPLTLVAG 204

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M H   G+++  +L   +       V+ SL+ +   +  L    A   + +G+ ++ 
Sbjct: 205 MGHWLLGSVDWSMLLSLLLGSLPGIVLGSLLSARAPERLLRNLLAATLVAVGVRLVL 261


>gi|94968535|ref|YP_590583.1| hypothetical protein Acid345_1507 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550585|gb|ABF40509.1| protein of unknown function DUF81 [Candidatus Koribacter versatilis
           Ellin345]
          Length = 276

 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 93/265 (35%), Gaps = 31/265 (11%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++ +  VA+FL+G ++ + G GG LV  P L            +   +A  T+   I P 
Sbjct: 25  HLVIAAVAAFLAGGINSVAG-GGTLVTFPTLMAL--------GLPPVIANATNTVAIWPG 75

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-- 139
           +V S    RR        ++  +    I     +L++     +   K      L   +  
Sbjct: 76  TVGSLWGFRREFAQTETRMRWLVIPSVIGGAAGALLLRITPPNAFEKMVPFLVLFATVIF 135

Query: 140 -------LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA-S 191
                   ++K       R      +  ++ M+ G   G  G G  I     +  +G   
Sbjct: 136 TARAPIQRLIKSAHPEAHRTKKWFVIGLVFQMLVGLYGGYFGAGISIMMLSALSIFGMTD 195

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
           + +  A ++  S  I   A L+ I++              V    VL++   SIL    A
Sbjct: 196 MLQMNALTSLFSLCINGVAALLFIWASM------------VYWPYVLVMAIGSILGGYGA 243

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSF 276
             L+  IG   + +   ++ +  S 
Sbjct: 244 AGLARKIGGDRVRVFVLVVGYAISA 268


>gi|319442370|ref|ZP_07991526.1| hypothetical protein CvarD4_11449 [Corynebacterium variabile DSM
           44702]
          Length = 319

 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 63/213 (29%), Gaps = 26/213 (12%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L  VA  L+  + G  G+  G+     L  +        +      +GT+L       
Sbjct: 3   LLLFAVAGLLAQLVDGALGMAFGITATTALILSGAAPAQASAAVHFAEVGTTLF------ 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S + H +   ++   +        +   V + ++S +         +   LL+G  +L
Sbjct: 57  --SGLAHWKLNNVHWPTVFFLGVPGAVGAFVGATVLSGLSTESAEPVVSTILLLLGAYVL 114

Query: 143 KRDRLYC--------------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL----L 184
            R                       P  + ++    +          GGG +  +    L
Sbjct: 115 VRSVALPWKRRQRSEFADGAGTPHTPAAHGRFGLAALGLGGGFLDATGGGGWGPVTTSTL 174

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +        K   T      L+A  A L  I+ 
Sbjct: 175 LSVGRREPRKIIGTVNTAEFLVAVSASLGFIFG 207


>gi|304320396|ref|YP_003854039.1| putative orphan protein [Parvularcula bermudensis HTCC2503]
 gi|303299298|gb|ADM08897.1| putative orphan protein [Parvularcula bermudensis HTCC2503]
          Length = 253

 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 85/257 (33%), Gaps = 29/257 (11%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              ++++ +F S  ++  F VGGGL+++ V+S       +     +             T
Sbjct: 15  IATIVVLTTFFSAAITAAFAVGGGLLLIAVMSTLLPAPAVVPVHGL-----------IMT 63

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            V          +I+ + +  ++    I   + S + + +  + L    A F L      
Sbjct: 64  GVNGGRAIVFRDSIDRRTVMYFLGGAVIGASLGSTIATDLPATALQLLVAGFILAT---- 119

Query: 142 LKRDRLYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
               +     + P  +    + G  +  L+  +G  G   T L+           TAT+A
Sbjct: 120 ----QWGPPWRLPFGSRSFVVAGAFSTVLTLFVGASGPFITTLIAQLPRFGRRMVTATAA 175

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                      +V   +G+              +  +++ +  S   T +  +L   + +
Sbjct: 176 ACMVAQHGLKSVVFALAGFLYAP---------WLPLIVLAVTASYGGTLVGERLLRRLDE 226

Query: 261 KYLTIGFSMIMFTTSFV 277
                G   I+   + +
Sbjct: 227 GKFRRGLKWILTGLAVI 243


>gi|325126336|gb|ADY85666.1| Hypothetical conserved protein [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 267

 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 76/258 (29%), Gaps = 24/258 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              +I+   L+G ++ +  +   LV  P L   F L  +  ++       T+   +  T 
Sbjct: 24  FIYLIILGVLAGIVAAVASM-ASLVSYPGLL-LFGLSPVSANM-------TNTAALVTTG 74

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S     +    N   L  + F      ++   ++         K    F L    L+L
Sbjct: 75  FGSLSSCLKEMRGNWGELWRYAFFQLTGALIGGWLLVKFPGKIFQKLVPFFVLFSAGLLL 134

Query: 143 KRDRLYCERKF--PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT-ATS 199
              R    ++         Y    V G  +G  G   G+ T + +     S +    A  
Sbjct: 135 YSGRQKQPKQATKLGRIGAYFGLFVAGIYAGYFGAASGVLTLIFLTALSDSSFVVINAIK 194

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           + + +L    AL +  + G             VN      +     +      K+   + 
Sbjct: 195 SVIGSLANLVALALFAFKGG------------VNCPVAFPLAIGLFIGGYFGQKMIKYLK 242

Query: 260 KKYLTIGFSMIMFTTSFV 277
             ++    +      +  
Sbjct: 243 PAWVRWITACFSVLLAIY 260



 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 13/117 (11%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT---SLGVIAPTSVM 84
              F++G  +G FG   G     VL+  F     D S  +  A+ +   SL  +   ++ 
Sbjct: 155 FGLFVAGIYAGYFGAASG-----VLTLIFLTALSDSSFVVINAIKSVIGSLANLVALALF 209

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +F      G +N  +       L I       MI ++  +++    A F +L+ I +
Sbjct: 210 AF-----KGGVNCPVAFPLAIGLFIGGYFGQKMIKYLKPAWVRWITACFSVLLAIYL 261


>gi|320010928|gb|ADW05778.1| protein of unknown function DUF81 [Streptomyces flavogriseus ATCC
           33331]
          Length = 263

 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 58/196 (29%), Gaps = 23/196 (11%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+  V    +  + + + R   + +        +    ++  +   + +    L    
Sbjct: 50  LGTNKAVAIVGTSGAAVTYLRKAPVRVGTAVRIGLMALAGSMTGAFFAAGISSDVLRPVI 109

Query: 131 AIFCLLMGILMLKRDRLYCE----------RKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
            +  L +   ++ R                 +        + G   GF  G  G G G F
Sbjct: 110 MVVLLAVAAFVMLRPSFGTAAAGDGAGEKVTRARTVTAIVLVGGGIGFYDGLFGPGTGTF 169

Query: 181 TNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
             L +       +  A+A +  V+      AL +  Y G             V      +
Sbjct: 170 LVLALTAVLHLDLVTASANAKIVNVCTNAGALAMFAYQGT------------VLWQLAAL 217

Query: 240 ILPISILITPLATKLS 255
           +   ++    L  +++
Sbjct: 218 MAVFNLAGAMLGARMA 233


>gi|153840657|ref|ZP_01993324.1| inner membrane protein YfcA [Vibrio parahaemolyticus AQ3810]
 gi|149745677|gb|EDM56808.1| inner membrane protein YfcA [Vibrio parahaemolyticus AQ3810]
          Length = 183

 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 62/169 (36%), Gaps = 16/169 (9%)

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK---RDRLYCERKFPDN 156
           ++  I    I   + +  +  +D S L     +  + + +  L      ++  E K  + 
Sbjct: 1   MRFAILCTFIGAAIGAEAVQFIDASVLTSLIPVLLIAISLYFLLAPSSRKIDGEPKLAEA 60

Query: 157 YVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
                 G   GF  G  G G G IFT   +     S+  ATA +  ++      ALL  +
Sbjct: 61  MFALCIGGGVGFYDGFFGPGTGSIFTVCFVALGHFSLVDATARTKILNFTSNIAALLFFV 120

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
            +G     LP W +G       L +     +   L  K+    G+K++ 
Sbjct: 121 LAG-----LPVWEIG-------LTMAVGGFIGAQLGAKVVVTKGQKWIR 157


>gi|187929761|ref|YP_001900248.1| hypothetical protein Rpic_2690 [Ralstonia pickettii 12J]
 gi|309781523|ref|ZP_07676259.1| membrane protein [Ralstonia sp. 5_7_47FAA]
 gi|187726651|gb|ACD27816.1| protein of unknown function DUF81 [Ralstonia pickettii 12J]
 gi|308919936|gb|EFP65597.1| membrane protein [Ralstonia sp. 5_7_47FAA]
          Length = 257

 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 80/246 (32%), Gaps = 34/246 (13%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P+L+  F   G   +     A+GT L   + T  +  + HR HG I   I+K      
Sbjct: 27  MTPLLTLMF---GFSPAT----AVGTDLAFASLTKGVGTIAHRSHGHIRWDIVKLLCLGS 79

Query: 108 PITTVVTSLMISHVDK------SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI 161
               +VT L++  +          +     +  +L  I +L R R+         Y    
Sbjct: 80  LPAALVTVLVLKRMGNLDAEWMHLIRVTIGVSVILTVISLLFRQRVLGWLARNPRYRLQG 139

Query: 162 WGMVTGFLSGAL---------GVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL- 211
             +    +   +          +G G     L+L     +  A                 
Sbjct: 140 ITLAVATVIVGVVLGVLVTVSSIGAGAVGATLILILYPELKSA-----------EVAGTD 188

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +        + GL    LG ++   ++ +L  SI    L  +LS  + ++ +    +  +
Sbjct: 189 IAYAVPLTAVAGLGHMYLGTIDWNLLVSLLVGSIPGIWLGARLSKNLPERLVRGALAATL 248

Query: 272 FTTSFV 277
             T+  
Sbjct: 249 TITAIK 254


>gi|303246213|ref|ZP_07332493.1| protein of unknown function DUF81 [Desulfovibrio fructosovorans JJ]
 gi|302492276|gb|EFL52148.1| protein of unknown function DUF81 [Desulfovibrio fructosovorans JJ]
          Length = 347

 Score = 43.9 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 102/297 (34%), Gaps = 57/297 (19%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            D  V  +  + +  F+ G +SG  G GG  V+ P +            +   VA+ +++
Sbjct: 11  IDLNVYSVIFLFLVGFIGGLVSGFIGSGGAFVLTPGMMSL--------GVPGPVAVASNM 62

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF--------LN 127
               P +++  ++  R+G +++K+         I   +   + + + + +        ++
Sbjct: 63  CHKFPKALVGSIKRYRYGQVDIKLGVIMGLFAEIGVQLGIKVQTTILERWGQAGSNLYVS 122

Query: 128 KAFAIFCLLM-----------------------------GILMLKRDRLYCERKFPDNYV 158
            AF +  L +                              I +               + 
Sbjct: 123 LAFVVVLLTVGSFVMRDAMRLARNGGAGGSSNRLAQRLQAIELWPMITFKRAGVRISMWF 182

Query: 159 KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
                + TG L+  + VGG I    LM   G +   A+A+   ++ ++     L+  Y G
Sbjct: 183 LIPVALATGMLAATIAVGGFIGVPGLMYVIGVTSIVASASELVIAFVMGLGGTLIWAYYG 242

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                        V+I   LIIL  S+    L    +  + +  + +  ++IM   +
Sbjct: 243 M------------VDIRLTLIILGGSLFGVQLGAIGTTYVKEYMIKMVMAIIMLIVA 287


>gi|114797853|ref|YP_759785.1| hypothetical protein HNE_1064 [Hyphomonas neptunium ATCC 15444]
 gi|114738027|gb|ABI76152.1| putative membrane protein [Hyphomonas neptunium ATCC 15444]
          Length = 256

 Score = 43.9 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 82/251 (32%), Gaps = 21/251 (8%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT--------SLGVIAPTSVMSFMEHRR 91
            G+G    +   L  +    G      + V  GT        +L           +    
Sbjct: 3   LGLGLLFFITAALYASVGFGGGSTYNALLVLHGTDYRILPAIALVCNILVVTGGVIRFHL 62

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
              ++++ L  ++        +   +   V ++          L+ G+ +          
Sbjct: 63  TKQLSLRRLMPFLITSIPAAWLGGRLP--VPETVFVGLLGAALLVSGLYLAFERAPPETA 120

Query: 152 KFPDN----YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
                     + Y  G   G LSG +G+GGGIF   ++ F G    +  A ++ +  L+ 
Sbjct: 121 PPTGAPPPGLISYATGAAIGLLSGLVGIGGGIFLAPVLYFLGWGTPRQIAAASSLFILVN 180

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS-YMIGKKYLTIG 266
             + L    +      +   ++ +        +LP+ ++   + + ++   +  + +   
Sbjct: 181 SVSGLAGQVTKLQDTDVLHLAMPY--WP----LLPLVVIGGQIGSWMASQKLQPRIVKRL 234

Query: 267 FSMIMFTTSFV 277
            ++++   +  
Sbjct: 235 TAVLLLYVAAR 245



 Score = 42.0 bits (98), Expect = 0.092,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 11/121 (9%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA--PTSVMS 85
                 G LSGL G+GGG+ + PVL                +A  +SL ++    + +  
Sbjct: 134 ATGAAIGLLSGLVGIGGGIFLAPVLYFL------GWGTPRQIAAASSLFILVNSVSGLAG 187

Query: 86  FMEHRRHGTINMKILKDW--IFVLPITTVVTSLMISH-VDKSFLNKAFAIFCLLMGILML 142
            +   +   +    +  W  + ++ I   + S M S  +    + +  A+  L +   +L
Sbjct: 188 QVTKLQDTDVLHLAMPYWPLLPLVVIGGQIGSWMASQKLQPRIVKRLTAVLLLYVAARLL 247

Query: 143 K 143
            
Sbjct: 248 F 248


>gi|221135182|ref|ZP_03561485.1| hypothetical protein GHTCC_09666 [Glaciecola sp. HTCC2999]
          Length = 297

 Score = 43.9 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 34/289 (11%), Positives = 92/289 (31%), Gaps = 47/289 (16%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           S   ++      ++        +   G GGG++ VP     F  + +     +  +    
Sbjct: 26  SPALILQEYGAFVLLGLAGAIFANSTGAGGGVIFVP----IFNQLQLSSDQIVATSFAIQ 81

Query: 75  LGVIAPTSVMSFMEHRRHGTIN--------MKILKDWIFVLPITTVVTSLMISHVD---- 122
              +   S+      +    I           +L   + V    +++    + +      
Sbjct: 82  CFGMVAGSI--AWRDQYLKAIQAQDTSTSIWSVLPQLLMVTVPFSIIGIWTVQYTPLITW 139

Query: 123 ----KSFLNKAFAIFCLLMGILMLKRDRLYCERK------FPDNYVKYIWGMVTGFLSGA 172
               ++ L+  F +F +++ + +L   +     +        D     I   + G ++  
Sbjct: 140 VSEAENTLHWIFGLFSIVLALAILGSLKHLKAEEQVQLVSSKDKLNLAIVAFLGGMVTAW 199

Query: 173 LGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           L VG G    + ++    S+  + A +  +SA+  +  +   I               FV
Sbjct: 200 LSVGVGELVAVYLILRRFSVTMSIAVAVMLSAMSVWGGIFYYI---------------FV 244

Query: 233 NIGAVLIILPISILITPLATKLSYM----IGKKYLTIGFSMIMFTTSFV 277
           N   ++ I   + +   +   ++      +    + + F++ +     V
Sbjct: 245 NPMVLIPIACFAGVGAIIGGSVAKYLVLWLNPYQVKVFFAVWVMFMGVV 293


>gi|118401229|ref|XP_001032935.1| hypothetical protein TTHERM_00470450 [Tetrahymena thermophila]
 gi|89287281|gb|EAR85272.1| hypothetical protein TTHERM_00470450 [Tetrahymena thermophila SB210]
          Length = 1325

 Score = 43.9 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 11/129 (8%)

Query: 14   LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQL-MGIDDSICMHVAMG 72
            L+   +   I +I +  F  G  +   G+GGG  + P+L   F        ++ + +   
Sbjct: 897  LNFPEIFGSIVIITILGF--GQAA---GIGGGTSITPILLALFLYDTKKSVALVILLVFS 951

Query: 73   TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            +SLG      +     H     I  +++   +  L + TV    +   +    +     +
Sbjct: 952  SSLGNTI--QISRERTHDGVPVIEYRLILVTLPTLIVGTVYGVAVNKFLPSIAVCI---L 1006

Query: 133  FCLLMGILM 141
              +L+   +
Sbjct: 1007 LVILLAQQI 1015


>gi|119094180|gb|ABL61002.1| membrane protein [uncultured marine bacterium HF10_25F10]
          Length = 248

 Score = 43.9 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 80/254 (31%), Gaps = 22/254 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +  ++ A    G ++GL G G         +  F L  +   +    A+  +L     T
Sbjct: 4   LLVFLLAAGLSGGFVNGLSGFG---------TALFSLGWLLQVMPPQQAVAIALVCSLVT 54

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            V      +   +I+ + L  +I        + ++++  VD   L+       LL G   
Sbjct: 55  GVPGVW--QVRHSIDRRRLALFILPAFAGIPIGTVLLGLVDTRLLSLLVGGMLLLYGGYF 112

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
             R R     +     V+   G V G L    G+  G   ++ +                
Sbjct: 113 AFR-RTLPTIEGNWTLVEAGIGFVGGVLGAMAGL-SGALPSMWLALRPWPKAVQRGIMQP 170

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
            S +I   A ++    G  +  +         +  + ++LP S+    +   L   +   
Sbjct: 171 FSMVILLVATVLLALEGVFMPQV---------LYNLALVLPASMFGAVIGLMLFRRMPDA 221

Query: 262 YLTIGFSMIMFTTS 275
                   +M  + 
Sbjct: 222 LYPRVLIGLMLISG 235


>gi|284044220|ref|YP_003394560.1| membrane protein [Conexibacter woesei DSM 14684]
 gi|283948441|gb|ADB51185.1| membrane protein [Conexibacter woesei DSM 14684]
          Length = 143

 Score = 43.9 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 45/99 (45%), Gaps = 7/99 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           + MVP L  AF        +    A  TSL V+ PT++++     + G  ++K       
Sbjct: 31  IFMVPFLVLAF-------GMVQQDAQATSLLVVLPTALVATRRLSKQGVGDVKAGLTIGL 83

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              + ++ ++L+   +  + L   FA+  +++G  +L+ 
Sbjct: 84  YGVVGSIASTLLALQLSGATLRALFAVLLVVVGAKLLRD 122


>gi|332159329|ref|YP_004424608.1| hypothetical protein PNA2_1689 [Pyrococcus sp. NA2]
 gi|331034792|gb|AEC52604.1| hypothetical protein PNA2_1689 [Pyrococcus sp. NA2]
          Length = 246

 Score = 43.9 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 100/253 (39%), Gaps = 21/253 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +  F+   +  + GVG  + +VPV+S           + + +A  T L +   + + +
Sbjct: 6   LALMVFILSVIFSIGGVGSAIAIVPVMSWF--------GVPLMIAKPTGLFINTLSMLSA 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            +++ +HG +  +     +    I   + + +   + K++++  F  F L  G +++   
Sbjct: 58  TVKNLKHGKLEYQFGLPILVAATIMAPLGAYVSKFISKTYISLIFVSFLLYSGTMLVFFK 117

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
                R         I G + GFL G LGVGGG   +  ++  G    K  +T+A +   
Sbjct: 118 PKQRSRSKGHIVEGLIIGGLAGFLGGLLGVGGGGIISPALIMLGYEPKKVASTTALIVFF 177

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY-MIGKKYLT 264
            +    L     G             +++  +L +   ++    + T + +  +  + + 
Sbjct: 178 SSLSGFLTYSGMGT------------LDLKLLLHVSISAMAGGWIGTHIMHFKMSSEQVK 225

Query: 265 IGFSMIMFTTSFV 277
               +I++  +F 
Sbjct: 226 KVIGIIIYLIAFK 238


>gi|300854014|ref|YP_003778998.1| hypothetical protein CLJU_c08280 [Clostridium ljungdahlii DSM
           13528]
 gi|300434129|gb|ADK13896.1| putative membrane protein [Clostridium ljungdahlii DSM 13528]
          Length = 253

 Score = 43.9 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 78/205 (38%), Gaps = 16/205 (7%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++ YI +  +  F++G +  + G GGGL+ +P              I +H A+GT+    
Sbjct: 1   MITYIIVCPLV-FIAGFVDAIAG-GGGLISLPAYMI--------SGIPVHFAIGTNKMSS 50

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              ++++   + ++G I +K+         I + + +L+   ++  +          +  
Sbjct: 51  CMGTIIATCRYAKNGYIKLKLGICSAVCALIGSPLGALISLKIEDFYFKILMLFILPITA 110

Query: 139 ILMLKRDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASI 192
             +L +  L   ++     +       +     G   G  G G G F  LL+      S+
Sbjct: 111 FYVLHKHNLEDNKQETSMNYKTYITCMLIAFFLGIYDGFYGPGTGTFLLLLLTSIANLSM 170

Query: 193 YKATATSAGVSALIAFPALLVRIYS 217
             +   +  ++      +L+  I +
Sbjct: 171 NTSAGITKAINLSSNVASLVTFIIN 195


>gi|255080318|ref|XP_002503739.1| 4-toluene sulfonate uptake permease [Micromonas sp. RCC299]
 gi|226519006|gb|ACO64997.1| 4-toluene sulfonate uptake permease [Micromonas sp. RCC299]
          Length = 310

 Score = 43.9 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 41/119 (34%), Gaps = 1/119 (0%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGID-DSICMHVAMGTSLGVIAPTS 82
             +   S    T + L G+GG  +  P+    F ++G          A   +L       
Sbjct: 19  AFMFPVSVCVATTAMLTGIGGAALFSPIFLLGFPMLGPGYPLDSAAEAFNVALLTECFGF 78

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
               + +   G ++ ++   +I V     V   + ++  D  FL   +     ++G  +
Sbjct: 79  TSGLIGYTNRGLVDWRVSLPFIAVGVPAGVAGGISVASADPGFLRLGYGAMMAMLGTYL 137


>gi|212709339|ref|ZP_03317467.1| hypothetical protein PROVALCAL_00374 [Providencia alcalifaciens DSM
           30120]
 gi|212688251|gb|EEB47779.1| hypothetical protein PROVALCAL_00374 [Providencia alcalifaciens DSM
           30120]
          Length = 260

 Score = 43.9 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 81/213 (38%), Gaps = 22/213 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I   +    L G +    GVGGG++++P+L+  F L  +        A+ T+  +    
Sbjct: 1   MIVTELAIGALIGLIISTTGVGGGVIVLPILTYFFGLNALA-------AVATANFLSMLM 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK---------------SFL 126
            V S   H R G I +K     + ++  +T ++SL+++ +                    
Sbjct: 54  KVSSSYMHFRLGNIPLKGALIVLAIMLPSTFLSSLLVTWLGSIPAYEKQVEWGINALVAA 113

Query: 127 NKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
              F+++  +  +      +    ++     +     +    L      GG +   +L+ 
Sbjct: 114 AIIFSLYLFIQRMFFANPLKKVVMKENQLKAMAIPAVLAGVVLGATGVGGGVVVLPMLLR 173

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           +   +I +A  TS  V+ +++  + L     G+
Sbjct: 174 YMDLNIKQAIGTSIVVTTVLSGSSALAYAQDGY 206


>gi|325968001|ref|YP_004244193.1| hypothetical protein VMUT_0480 [Vulcanisaeta moutnovskia 768-28]
 gi|323707204|gb|ADY00691.1| hypothetical protein VMUT_0480 [Vulcanisaeta moutnovskia 768-28]
          Length = 313

 Score = 43.9 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 52/250 (20%), Positives = 90/250 (36%), Gaps = 46/250 (18%)

Query: 12  VFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
           +F   +  V ++ +I +   L G ++ L GVGGG++  P++        I+  I      
Sbjct: 15  IFTLLNSPVIFLIIIFLICILIGFVAALAGVGGGVLFTPIMMA---FTTINPDIVR---- 67

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-------S 124
            T L +   +S+MS   +   G  N  +         I  ++ S +  H+         +
Sbjct: 68  ATGLAIATMSSLMSARPYLGRGIANFNLALFSSLPYTIFAIIGSFIGLHITAVMGSFGKA 127

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPD---------------------------NY 157
            +  A  +  L + ILM+ + R       P+                             
Sbjct: 128 LIRFALGVLVLFIVILMITKGRRTEYPIPPEGKYDKLANAFELNSSYYEISLGRIVEYRI 187

Query: 158 VKYIWG----MVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
           V  +WG    +  G +SG  G+G G     +  L     +  ATATS  V  +    A+ 
Sbjct: 188 VNTVWGLLCFVGIGLVSGMFGLGAGWAIVPVYNLIMYVPLKVATATSLVVIGIGDTAAMW 247

Query: 213 VRIYSGWGLN 222
           V I SG  + 
Sbjct: 248 VYINSGAMIP 257



 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 7/114 (6%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G +SG+FG+G G  +VPV +           + + VA  TSL VI      +   +   G
Sbjct: 201 GLVSGMFGLGAGWAIVPVYNLIMY-------VPLKVATATSLVVIGIGDTAAMWVYINSG 253

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            +        +    I   V S ++  +    +     +  LL    ++++   
Sbjct: 254 AMIPIFAVPCLLGCMIGAQVGSRLMPKLRAYVIRWFVILAMLLASARLIQQALP 307


>gi|220916138|ref|YP_002491442.1| protein of unknown function DUF81 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219953992|gb|ACL64376.1| protein of unknown function DUF81 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 254

 Score = 43.9 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 72/198 (36%), Gaps = 14/198 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   + L+G +  + G GGGL+ +P L            +  H+A+GT+ G     S  +
Sbjct: 12  LTAVALLAGVVDAIAG-GGGLLTLPALLW--------TGLPPHLALGTNKGQSVFGSFAA 62

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN----KAFAIFCLLMGILM 141
            +   R G ++ +  +    +    ++  + ++  V  + L        A   L +G+  
Sbjct: 63  LVRFSRAGMVDGRRARVTFPLGLAGSLAGAGLVLLVPPATLRPVVLALLAFAALFVGLRR 122

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSA 200
               R    R+     V     +  G   G  G G G       +   G  + +A+A + 
Sbjct: 123 GPPARPEGARREGTPLVAGAIALAIGAYDGFFGPGTGTFLIVAFVALLGDGLARASAGAK 182

Query: 201 GVSALIAFPALLVRIYSG 218
            V+      A+ +    G
Sbjct: 183 VVNFASNLAAVALFSIKG 200


>gi|116333038|ref|YP_794565.1| permease [Lactobacillus brevis ATCC 367]
 gi|116098385|gb|ABJ63534.1| Predicted permease [Lactobacillus brevis ATCC 367]
          Length = 140

 Score = 43.9 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 47/120 (39%), Gaps = 12/120 (10%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +   LSG + G+ G+ GG  ++  L            + M  A  TS  V+  TS++  
Sbjct: 28  AIYGALSGIMVGVAGLSGGGPIIAGLLVL--------GLDMLPAAATSAYVLVGTSLVGL 79

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL----NKAFAIFCLLMGILML 142
           + H     I+  +    +    +  +    ++ H+D   L         +  ++MG+ M+
Sbjct: 80  LFHLSANNIDWSVGLSLMIGAVLGALCAPRLLMHIDPQKLNQYVKPFMGLLLIVMGLRMI 139


>gi|328544855|ref|YP_004304964.1| permease protein [polymorphum gilvum SL003B-26A1]
 gi|326414596|gb|ADZ71659.1| Permease protein [Polymorphum gilvum SL003B-26A1]
          Length = 309

 Score = 43.9 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 99/307 (32%), Gaps = 56/307 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + +I       G LSGLFG+GGG ++ P+L            I   V
Sbjct: 1   MQIYLPIAELPVNMFMIFGMGGAVGFLSGLFGIGGGFLLTPLLIF--------SGIPPAV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD-----KS 124
           ++ T    +  +S    + + R G I+MK+    +      + +   +   +        
Sbjct: 53  SVATVTSQVVASSASGVLAYWRRGAIDMKLAFVLMLAGIAGSALGVWLFELLQRLGQLDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            ++ ++  F   +G LML                                + R    + +
Sbjct: 113 VISLSYVTFLGTIGGLMLVESLRAIQRRRGGAVPAARRPGQHNWIHGLPFKMRFRRSKLY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                  + G   GFL   LG+GGG      +++           TS          A +
Sbjct: 173 VSVIPIVLLGGAIGFLGTVLGIGGGFMMVPALIYLLRVPTSVVIGTSLMQILFTMAAATI 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           +                  V+I   LI++   ++      ++   +    L +  ++++ 
Sbjct: 233 LHAIGTQT-----------VDIVLALILMVGGVIGAQFGARMGQKLRGDQLRLLLALLVL 281

Query: 273 TTSFVFA 279
                FA
Sbjct: 282 AVGIRFA 288


>gi|296125703|ref|YP_003632955.1| hypothetical protein Bmur_0656 [Brachyspira murdochii DSM 12563]
 gi|296017519|gb|ADG70756.1| protein of unknown function DUF81 [Brachyspira murdochii DSM 12563]
          Length = 266

 Score = 43.9 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 43/114 (37%), Gaps = 10/114 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  I L I+   + G LS   G+GGG   +  L   F +           A   SL +I 
Sbjct: 138 VQNIFLCIIIGLVLGFLSSFLGIGGGPFNIAFLYFFFSMDS-------KSAAQNSLYIIL 190

Query: 80  PTSVMSFM---EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
            + + S      +     +N+  L   I    +  V+   +   +D + +NK F
Sbjct: 191 FSQISSVFISIANNEASKVNLHFLIVMIAGGILGGVLGRFINKKIDSNIVNKLF 244



 Score = 35.4 bits (81), Expect = 9.9,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVK-----YIWGMVTGFLSGALGVGGGIFTNLLM 185
           A+  LL  +  +   +   ++K    +V+      I G+V GFLS  LG+GGG F    +
Sbjct: 111 AVLILLTILTFIFTIKNMGDKKVKSLHVQNIFLCIIIGLVLGFLSSFLGIGGGPFNIAFL 170

Query: 186 -LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
             F+      A   S  +       ++ + I +              VN+  +++++   
Sbjct: 171 YFFFSMDSKSAAQNSLYIILFSQISSVFISIANNEASK---------VNLHFLIVMIAGG 221

Query: 245 ILITPLATKLSYMIGKKYLTIGF 267
           IL   L   ++  I    +   F
Sbjct: 222 ILGGVLGRFINKKIDSNIVNKLF 244


>gi|77360692|ref|YP_340267.1| hypothetical protein PSHAa1752 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76875603|emb|CAI86824.1| conserved protein of unknown function [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 243

 Score = 43.9 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 70/200 (35%), Gaps = 13/200 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + LI     L G     F    G+  VP+L                 A+   L ++ 
Sbjct: 3   ITTLVLIAAVVVLIGVSKSAFAGALGVFAVPLLMLKLPAAQ---------AIALMLPLLI 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              ++S   + R    + ++L   I    +  ++  L+I  ++   L    A+ C++  I
Sbjct: 54  IGDMLSVRSYWRKW--DNQLLLPLIPGAIVGVLIAYLIIDVINAKHLRLIIALICIVFSI 111

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             +   +    +   +     I  M +G  S  +  GG     +     G +  K  AT+
Sbjct: 112 KNIFFKKSSL-KILSNKIGAGIMSMFSGITSSLVHAGG-PPIIIYFTAIGLTPGKFVATA 169

Query: 200 AGVSALIAFPALLVRIYSGW 219
           A   A++    L+  +  G 
Sbjct: 170 AIFFAMMNVIKLIAALSFGL 189


>gi|332710845|ref|ZP_08430782.1| putative permease [Lyngbya majuscula 3L]
 gi|332350398|gb|EGJ30001.1| putative permease [Lyngbya majuscula 3L]
          Length = 357

 Score = 43.9 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 75/199 (37%), Gaps = 19/199 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSI--CMHVAMGTSLGVIAPTSV 83
                     ++G   +GGG V  P L+K   +   D  +      ++G S       ++
Sbjct: 74  FAFTMVFGSMVAGATSMGGGAVAFPALTKWLHVSPPDAKLFSLAIQSIGMSAASFTIVAM 133

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVT-SLMISHVDKSFLNKAFAIFCLLMGILML 142
                      +  K+++           +  + +   +    +  +F +      ++++
Sbjct: 134 --------KTPVEWKLIRWVSLGGIPGIFMGTAFLAPLLPPEVIKISFTMMVSSFALILI 185

Query: 143 KRDRLYCERKF-------PDNYVKYIWGMVTGFLSGALGVGGGIFT-NLLMLFYGASIYK 194
           + +    ER F        +  +  + G++ G +SG +G G  +F  ++++L +G     
Sbjct: 186 QLNLTKTERNFTIEHWGKREKILSLVVGVMGGMISGLVGSGMDVFAYSVMVLLFGLCEKV 245

Query: 195 ATATSAGVSALIAFPALLV 213
           +T TS  + A+ A    L+
Sbjct: 246 STPTSVILMAINAVTGFLI 264


>gi|297160743|gb|ADI10455.1| hypothetical protein SBI_07335 [Streptomyces bingchenggensis BCW-1]
          Length = 255

 Score = 43.9 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 58/156 (37%), Gaps = 8/156 (5%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+  +    +  + + + R   ++M++           ++  +   S ++ + L    
Sbjct: 44  LGTNKAIAIVGTTGAAITYTRKTPLDMRLATRIGAAAVAGSLAGAFFASGINSAVLRPLI 103

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVK-------YIWGMVTGFLSGALGVGGGIFTNL 183
            +  L +   +L R          +   +          G+  GF  G +G G G F  +
Sbjct: 104 MVVLLAVLAFVLLRPAFGTAPAPAEPLTRQRVLAAILAIGLGIGFYDGLIGPGTGTFLVI 163

Query: 184 LML-FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            ++     ++  A+AT+  V+    F AL+     G
Sbjct: 164 ALVAALHMNLVTASATAKVVNVCTNFGALVTFAIQG 199


>gi|302560762|ref|ZP_07313104.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302478380|gb|EFL41473.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 260

 Score = 43.9 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 52/156 (33%), Gaps = 7/156 (4%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+GT+  V    +  + + + R   ++++            +   +   + +    L   
Sbjct: 50  ALGTNKAVAIVGTTGAAVTYARKAPVDVRTAVRIGLAALAGSSAGAFFAAGMSTEVLKPV 109

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYI------WGMVTGFLSGALGVGGGIFTNL 183
             +  L +   ++ R              + I       G+  GF  G +G G G F  L
Sbjct: 110 IMVVLLAVAAFVILRPAFGTAPATGPATRRQILSAIGLAGLGIGFYDGLIGPGTGTFLVL 169

Query: 184 LML-FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            +       +  A+AT+  V+      AL    + G
Sbjct: 170 ALTALLHLDLVTASATAKIVNCCTNAGALATFAWQG 205


>gi|116625001|ref|YP_827157.1| hypothetical protein Acid_5931 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228163|gb|ABJ86872.1| protein of unknown function DUF81 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 254

 Score = 43.9 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 84/260 (32%), Gaps = 31/260 (11%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
             ++FL+G ++ + G GG LV  P L            +    A  TS   I P +V S 
Sbjct: 10  FASAFLAGAINSVAG-GGTLVSFPALIWL--------GLNSVAANATSTVAIWPGTVGSA 60

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI------- 139
             +RR         +  I    +  +  +L++     S  ++      L   +       
Sbjct: 61  WGYRRELANAEARFRILIVPSLVGGITGALLLRWTPPSVFDRLVPFLILFATLLFMAQEP 120

Query: 140 --LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA-SIYKAT 196
              MLK       +         ++ +  G   G  G G GI     +   G   I++  
Sbjct: 121 VQRMLKTGDSEAHKSTKWLVGALLFQLAVGIYGGYFGAGIGILMLAALSILGLHDIHEMN 180

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           +        I   A +  IY+G             V    VLI+   +IL   L    + 
Sbjct: 181 SLKVVFGGSINGIAAVYFIYAGM------------VEWPYVLIMAVGAILGGFLGAGTAR 228

Query: 257 MIGKKYLTIGFSMIMFTTSF 276
            +G+  +      I F  + 
Sbjct: 229 KLGRTAVRRIVIAIGFGMAI 248


>gi|254514737|ref|ZP_05126798.1| conserved hypothetical protein [gamma proteobacterium NOR5-3]
 gi|219676980|gb|EED33345.1| conserved hypothetical protein [gamma proteobacterium NOR5-3]
          Length = 266

 Score = 43.9 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 88/256 (34%), Gaps = 29/256 (11%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            ++   +    +   G GGG+V +P     F  +G      +  + G  +     T+   
Sbjct: 14  FVLVGIIGAIFANATGAGGGVVFIP----LFHELGFSSQQSVASSFG--IQCFGMTTGAI 67

Query: 86  FMEHR----RHGTINMKILKDWIFVLPITTVVTSLMISHV---DKSFLNKAFAIFCLLMG 138
              H     R            + V    +++    ++ +     +     FA+F  L+G
Sbjct: 68  AWSHHYQSERRPYSQWTAFLPALGVSIPFSILGLWGVNLLRISPPAETVTTFAVFSALLG 127

Query: 139 ILML---KRDRLYCERKFPDNYVKYI--WGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
           + ++    +     +     + +  +       G ++  L VG G F    ++     + 
Sbjct: 128 LAIITVSGKQDAVAQEGLRRSDLLALGPIAFAGGIVTAWLSVGVGEFVAFYLILRRYDVK 187

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A + +  +SA   + A   ++  G        WS+       +++  P +++   +A K
Sbjct: 188 LAVSVAVVLSAATVWSAAPHQLVMG----DSADWSV-------IMLAGPGAVVGAIIARK 236

Query: 254 LSYMIGKKYLTIGFSM 269
           L+  +    L   F +
Sbjct: 237 LALAMNTAKLKRFFGL 252


>gi|319789050|ref|YP_004150683.1| protein of unknown function DUF81 [Thermovibrio ammonificans HB-1]
 gi|317113552|gb|ADU96042.1| protein of unknown function DUF81 [Thermovibrio ammonificans HB-1]
          Length = 243

 Score = 43.9 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 89/252 (35%), Gaps = 22/252 (8%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
            SF    +  L G+G    ++P L            +   VA    L     ++  + + 
Sbjct: 9   VSFFLTFVFALGGLGSAAALIPTLVFL--------GVPFPVARPAGLFANFISTFSATVH 60

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
           + R G ++  +    +    + + V +   + + +  +   F +F    G+ M+   +  
Sbjct: 61  NLRAGLVDFSLAIPILLPAVLLSPVGAYASTVLPERVVGAVFTLFLFFAGL-MVYVPKRE 119

Query: 149 CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
                   +   + G + GF+SG LG+GGG   + +++  G S  K    +A      + 
Sbjct: 120 LFDATGYRWYPPLVGALAGFISGLLGIGGGALISPMLVIAGYSPKKVAPVTAFAVVFSSV 179

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM-IGKKYLTIGF 267
            A L  +             LG V+    L +   ++    L   +++  +    +    
Sbjct: 180 SAFLAYL------------KLGSVDWKVTLAVALPALFAGYLGAFVTHRFLTAAQVKRIL 227

Query: 268 SMIMFTTSFVFA 279
            +I F     FA
Sbjct: 228 GIIFFILGIKFA 239


>gi|170701779|ref|ZP_02892714.1| protein of unknown function DUF81 [Burkholderia ambifaria IOP40-10]
 gi|170133327|gb|EDT01720.1| protein of unknown function DUF81 [Burkholderia ambifaria IOP40-10]
          Length = 285

 Score = 43.9 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 56/268 (20%), Positives = 90/268 (33%), Gaps = 31/268 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  ++    G L GL GVGGG +M P+L   F        +    A+GT L   A T  
Sbjct: 31  LLYSLSGLFVGILVGLTGVGGGSLMTPILVLLF-------GVHPATAVGTDLLYAAATKA 83

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSL------MISHVDKSFLNKAFAIFCLLM 137
              + H   G+I+ +I             +T        M +      +     I  LL 
Sbjct: 84  TGTLVHGLKGSIDWRITGRLAAGSVPAAALTLWWLHTHGMNTPGTARMIQLVLGIALLLT 143

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            + ++ R                    +   + G V G L     VG G     ++L   
Sbjct: 144 SLALIFRPQLTAFAARNPLAPSPARTLWSTVLTGAVLGMLVSMTSVGAGAIGVTVLLLL- 202

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +    AT+  V + IA    L  I       G+  W LG V+   +L +L  S+    
Sbjct: 203 YPM---LATTRIVGSDIAHAVPLTLI------AGMGHWLLGSVDWSMLLSLLLGSLPGIV 253

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + + LS    ++ L    +  +      
Sbjct: 254 IGSLLSARAPERLLRNLLAATLVAVGIR 281



 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 49/117 (41%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  +  VG G + V VL   + ++           +G+ +    P ++++ 
Sbjct: 174 VLTGAVLGMLVSMTSVGAGAIGVTVLLLLYPML------ATTRIVGSDIAHAVPLTLIAG 227

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M H   G+++  +L   +       V+ SL+ +   +  L    A   + +GI ++ 
Sbjct: 228 MGHWLLGSVDWSMLLSLLLGSLPGIVIGSLLSARAPERLLRNLLAATLVAVGIRLVL 284


>gi|115350774|ref|YP_772613.1| hypothetical protein Bamb_0720 [Burkholderia ambifaria AMMD]
 gi|115280762|gb|ABI86279.1| protein of unknown function DUF81 [Burkholderia ambifaria AMMD]
          Length = 262

 Score = 43.9 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 59/268 (22%), Positives = 93/268 (34%), Gaps = 31/268 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  ++    G L GL GVGGG +M P+L   F        +    A+GT L   A T  
Sbjct: 8   LLYSLSGLFVGILVGLTGVGGGSLMTPILVLLF-------GVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI------SHVDKSFLNKAFAIFCLLM 137
              + H   G+I+ +I             VT  ++      S      +     I  LL 
Sbjct: 61  TGTLVHGLKGSIDWRITGRLAAGSVPAAAVTLWVLHTHGVNSPGTARMIQLVLGIALLLT 120

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            + ++ R                    +   + G V G L     VG G     ++L   
Sbjct: 121 SLALIFRPQLTALAARNPLAPSPARTLWSTVLTGAVLGVLVSMTSVGAGAIGVTVLLL-- 178

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +Y A AT+  V + IA    L        + G+  W LG V+   +L +L  S+    
Sbjct: 179 --LYPALATTRIVGSDIAHAVPLTL------VAGMGHWLLGSVDWSMLLSLLLGSLPGIV 230

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L + LS    ++ L    +  +      
Sbjct: 231 LGSLLSARAPERLLRNLLAATLVAVGIR 258



 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 49/117 (41%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  +  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 151 VLTGAVLGVLVSMTSVGAGAIGVTVLLLLY------PALATTRIVGSDIAHAVPLTLVAG 204

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M H   G+++  +L   +       V+ SL+ +   +  L    A   + +GI ++ 
Sbjct: 205 MGHWLLGSVDWSMLLSLLLGSLPGIVLGSLLSARAPERLLRNLLAATLVAVGIRLVL 261


>gi|320120645|gb|EFE27956.2| membrane protein [Filifactor alocis ATCC 35896]
          Length = 243

 Score = 43.5 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 71/193 (36%), Gaps = 14/193 (7%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           FL+G +  + G GGGL+ +P              I +H+A+GT+       + ++     
Sbjct: 6   FLAGFIDAIAG-GGGLISLPAYLI--------SGIPIHMAIGTNKLSSGLGTGLTTYRFA 56

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           R G I+ KI    +        + + +   +++ FL K   +   L    +++      +
Sbjct: 57  RKGYISYKIAFFAVITAFFGASLGAKLSLIIEELFLMKLMLVILPLTAWYVVRGISFETD 116

Query: 151 RKF----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSAL 205
                         +   V     G  G G G F  LL++  G  +I +A   +  ++  
Sbjct: 117 APAYPFKKTVRRACLVAFVAAVYDGFYGPGAGTFMILLLVLIGHMNIREANGVAKAINLA 176

Query: 206 IAFPALLVRIYSG 218
               AL V    G
Sbjct: 177 TNVAALTVFFLHG 189


>gi|94501545|ref|ZP_01308063.1| hypothetical protein RED65_13037 [Oceanobacter sp. RED65]
 gi|94426363|gb|EAT11353.1| hypothetical protein RED65_13037 [Oceanobacter sp. RED65]
          Length = 243

 Score = 43.5 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 74/198 (37%), Gaps = 17/198 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  L I+   L+G     F  G G+V VP+L+           I +  A+   L V+   
Sbjct: 7   FWLLAILGVVLTGISKSGFAGGAGVVAVPLLALW---------IPVEQAIAIMLPVLIAM 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            + +   + R   IN +I K  I    +   + S +++ + ++ +    AI  +   +  
Sbjct: 58  DLQAVHLYWR--DINWRIFKPLIPAALLGITLASFLLNQLPENTMLLILAILSIGFALWQ 115

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
               R + +  F      + WG  +G  S  L  GG      L+   G    +  A +  
Sbjct: 116 SLS-RWFAKLHFQG----FFWGSFSGITSTLLHAGGPPINMYLLTL-GLPKRQWIAITCI 169

Query: 202 VSALIAFPALLVRIYSGW 219
             A + +  ++    SG 
Sbjct: 170 FFAFMNWIKVIPYSLSGL 187


>gi|254253104|ref|ZP_04946422.1| hypothetical protein BDAG_02356 [Burkholderia dolosa AUO158]
 gi|124895713|gb|EAY69593.1| hypothetical protein BDAG_02356 [Burkholderia dolosa AUO158]
          Length = 262

 Score = 43.5 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 56/268 (20%), Positives = 93/268 (34%), Gaps = 31/268 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  ++    G L GL GVGGG +M P+L   F        +    A+GT L   A T  
Sbjct: 8   LLYSLSGLFVGILVGLTGVGGGSLMTPILVLLF-------GVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH------VDKSFLNKAFAIFCLLM 137
              + H   G+++ +I             VT  ++             +     +  LL 
Sbjct: 61  TGTLVHGLKGSVDWRITGRLAAGSVPAAAVTLWVLHSHGLNAPGTARLIQLVLGVALLLT 120

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            + ++ R               +    +   + G V G L     VG G     ++L   
Sbjct: 121 SVALIFRPQLAAFAARNPLAPSRARTLWSTVLTGAVLGVLVSMTSVGAGAIGVTVLLL-- 178

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +Y A AT+  V + IA    L        + G+  W LG V+   +L +L  S+    
Sbjct: 179 --LYPALATTRIVGSDIAHAVPLTL------VAGMGHWLLGSVDWSMLLSLLLGSLPGIV 230

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L + LS    ++ L    +  +      
Sbjct: 231 LGSVLSARAPERLLRNLLAATLVAVGVR 258



 Score = 38.5 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 49/117 (41%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  +  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 151 VLTGAVLGVLVSMTSVGAGAIGVTVLLLLY------PALATTRIVGSDIAHAVPLTLVAG 204

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M H   G+++  +L   +       V+ S++ +   +  L    A   + +G+ ++ 
Sbjct: 205 MGHWLLGSVDWSMLLSLLLGSLPGIVLGSVLSARAPERLLRNLLAATLVAVGVRLVL 261


>gi|327404849|ref|YP_004345687.1| hypothetical protein Fluta_2870 [Fluviicola taffensis DSM 16823]
 gi|327320357|gb|AEA44849.1| protein of unknown function DUF81 [Fluviicola taffensis DSM 16823]
          Length = 122

 Score = 43.5 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 39/100 (39%), Gaps = 8/100 (8%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA-PTSVMSFMEHRRHGTINMKILKDWIF 105
           +++P L                +A GT+L ++  P   ++  ++ + G +++K       
Sbjct: 30  IIIPALMIFL-------GYSQQLAQGTALIMMVLPVGALAAFQYYQKGFVDVKAALILAG 82

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +     +   + + +  L K FA+  + + + M  + 
Sbjct: 83  FFFVGGFFGAKFATQIPQEILKKVFAVMLVGIALKMWFQK 122


>gi|332200354|gb|EGJ14427.1| putative membrane protein [Streptococcus pneumoniae GA47368]
          Length = 170

 Score = 43.5 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 46/124 (37%), Gaps = 4/124 (3%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM----ISHVDKS 124
           +A  +S  V     + +     +   I  +++    F   +   +  L+    +S +   
Sbjct: 43  IAFYSSFSVFIMAIISTIKRFSQSKEIKWRLIFTVSFSSVLGGFLGHLIFQVLLSQLSVR 102

Query: 125 FLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
            ++    I   +M ++           +F       I G++ G +S  LG+GGG     L
Sbjct: 103 LVSIVQMILLFVMLLVSFVLTDFKKTYQFDKIGFYMICGLLLGLISSFLGIGGGPLNVSL 162

Query: 185 MLFY 188
           ++ +
Sbjct: 163 LMVF 166


>gi|218289760|ref|ZP_03493968.1| protein of unknown function DUF81 [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218240217|gb|EED07401.1| protein of unknown function DUF81 [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 266

 Score = 43.5 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 56/264 (21%), Positives = 90/264 (34%), Gaps = 24/264 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L I    + G   GL G GG ++ VP+L     +         H+ +GT+   +A  +
Sbjct: 9   IVLAIACGGVVGFTLGLIGGGGSILAVPLLLYVVGI------HNAHIVIGTTALAVAVNA 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++ + H RHG +  K    +     I  VV S+    +D   L   FA+  L + +  L
Sbjct: 63  WINLIPHWRHGHVRWKPAILFAIPGAIGAVVGSIFGKMLDGKALLFLFALLILAIAVRTL 122

Query: 143 KRDR----LYCERKFPDNY----VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
            + R           P ++    V    G            GG +    LM   G  +  
Sbjct: 123 IQARRGNGKGAAADPPGSFRWGRVLATGGGTGLLSGFFGIGGGFLIVPGLMFATGMDMID 182

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           A  +S     L      +    SG             V +  VL  +    L T +++KL
Sbjct: 183 AIGSSLVSVGLFGVTTAVSYAASGLVAWN--------VFLLYVLGGIAGGFLGTLVSSKL 234

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
                K  L   F  I+   +   
Sbjct: 235 GSR--KSLLQTIFGSILVLVALYM 256



 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 34/94 (36%), Gaps = 2/94 (2%)

Query: 54  KAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV 113
                +     + M  A+G+SL  +    V + + +   G +   +   ++        +
Sbjct: 167 LIVPGLMFATGMDMIDAIGSSLVSVGLFGVTTAVSYAASGLVAWNVFLLYVLGGIAGGFL 226

Query: 114 TSLMISHVDKS--FLNKAFAIFCLLMGILMLKRD 145
            +L+ S +      L   F    +L+ + ML  +
Sbjct: 227 GTLVSSKLGSRKSLLQTIFGSILVLVALYMLYDN 260


>gi|217032475|ref|ZP_03437967.1| hypothetical protein HPB128_156g5 [Helicobacter pylori B128]
 gi|216945821|gb|EEC24442.1| hypothetical protein HPB128_156g5 [Helicobacter pylori B128]
          Length = 256

 Score = 43.5 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 72/205 (35%), Gaps = 15/205 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   L I     +G LSG+FG+                + +        ++G S+  +A
Sbjct: 1   MDIYALYIAIGLFTGILSGIFGI--------GGGLIIVPIMLATGHSFEESIGISILQMA 52

Query: 80  PTSVM-SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
            +S + S     +  +++  +         I    +  ++  V    L   FA+  +   
Sbjct: 53  LSSFVGSCFVIYKKKSLDFSLGLLIGAGGLIGASFSGFVLKIVSSKILMVIFALLVVYSM 112

Query: 139 ILMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASI 192
           I  + + +        +R        ++ G +TGF +  LG+GGG+    LM ++ G   
Sbjct: 113 IQFVLKPKKKDFIADTKRYPLQGLKLFLIGALTGFFAITLGIGGGMLMVPLMHYFLGYDS 172

Query: 193 YKATATSAGVSALIAFPALLVRIYS 217
            K  A         +       +Y 
Sbjct: 173 KKCVALGLFFILFSSISGAFSLMYH 197


>gi|90416226|ref|ZP_01224158.1| hypothetical protein GB2207_11128 [marine gamma proteobacterium
           HTCC2207]
 gi|90331951|gb|EAS47165.1| hypothetical protein GB2207_11128 [marine gamma proteobacterium
           HTCC2207]
          Length = 250

 Score = 43.5 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 85/233 (36%), Gaps = 25/233 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           ++  +F +G +S + G G G++ +P L  A         +    A+ T+    +  ++ S
Sbjct: 11  LVSLAFFAGLISSIAGSG-GILTLPALLWA--------GLPPLNALATNKVQSSIGTLSS 61

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
                R+G I++K L   + +  + +V+ +L +  +D   L        + + +  L   
Sbjct: 62  AWNFFRNGHIDIKPLLPVLLMGFVGSVIGTLFVQQLDSEILLTLIPFLLIAIALYFLLMP 121

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVG----GGIFTNLLMLFYGASIYKATATSAG 201
           ++      P     +        +    G      G IF  LL+     ++  ATA +  
Sbjct: 122 KISAADSQPKISQLWFACTAGLGMGFYGGFFGPAMGSIFPFLLVWLVARNLVTATAETKL 181

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           +  ++   + ++ I              G V     + +    ++   L + L
Sbjct: 182 MILVVNGTSAVIFIAG------------GHVLWSLAIAMSIAQMIGARLGSNL 222


>gi|268320238|ref|YP_003293894.1| hypothetical protein FI9785_1776 [Lactobacillus johnsonii FI9785]
 gi|262398613|emb|CAX67627.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
          Length = 251

 Score = 43.5 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 80/231 (34%), Gaps = 20/231 (8%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +GI        A  T+   +  T V S     +    + K +  +     + + 
Sbjct: 32  YPILLSVGIPPVY----ANTTNDAALIWTGVGSTASSLKELKGHWKEVSFYSIFTIVGSA 87

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI---WGMVTGFL 169
           +  +++         K         G+++L    ++ E+   +  ++ I     ++TG  
Sbjct: 88  LGCMLLIQFPGKIFKKIVPFCIAFSGLMILFSGEIHLEKDGNNRLLQIISLLCLVITGIY 147

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKAT-ATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +G  G   G+   +++       +    A    + AL    AL++ +++           
Sbjct: 148 AGYFGAASGVLMLVILNAISDDDFLTVNAMKNIIGALSNLVALIIYMFTAK--------- 198

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              +   + + +   +++ +    ++   I  K + +G +++    +  FA
Sbjct: 199 ---IYWDSAIPLAIGTLIGSYFGPQIMRHIPVKVIRLGIAVLALIQAAYFA 246


>gi|20807592|ref|NP_622763.1| hypothetical protein TTE1132 [Thermoanaerobacter tengcongensis MB4]
 gi|20516131|gb|AAM24367.1| hypothetical protein TTE1132 [Thermoanaerobacter tengcongensis MB4]
          Length = 117

 Score = 43.5 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 36/89 (40%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
             + I   +  H A   +L    PT+V++ + H +   I   IL   I    I ++V + 
Sbjct: 26  PALTIIMGVEQHTAQSVNLLSFIPTAVIALIYHLKKRNIKYSILPLIITGGIIGSLVGAN 85

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           +        L K FAI   L+GI  +   
Sbjct: 86  IAIVTKAILLKKIFAILLFLIGIYEILSK 114


>gi|296503189|ref|YP_003664889.1| hypothetical protein BMB171_C2357 [Bacillus thuringiensis BMB171]
 gi|296324241|gb|ADH07169.1| hypothetical protein BMB171_C2357 [Bacillus thuringiensis BMB171]
          Length = 256

 Score = 43.5 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 103/274 (37%), Gaps = 44/274 (16%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             II+   + G L G  G+GG  ++ P L       GI  S    VA+GT L   + T +
Sbjct: 3   IFIIMMGLIIGGLVGATGIGGAALLTPFLLVL----GISPS----VAVGTDLVYNSITKM 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD------KSFLNKAFAIFCLLM 137
               +H +  TIN +++K        + V+  +++  +       +  +        +L 
Sbjct: 55  FGISQHWKQKTINFRLVKYLAMGSVPSAVIAIILLHFLPILHQNREGIIKYMLGYVLILA 114

Query: 138 -------------GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
                              + R   ++K    ++  I+G + G  S    VG G    + 
Sbjct: 115 AISIIIKNLFYNEASQNFFQKRTIEQKKSLTIFIGIIFGFIVGLTS----VGSGSLFAIA 170

Query: 185 MLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           M+F Y     +   T    + L+   A ++ I            +LG V+   ++ +L  
Sbjct: 171 MIFLYKLKSPELVGTDITHAFLLVTVASIINI------------NLGNVDYILLIQLLIG 218

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           S+    L ++LS  I  K L +  ++I+  +   
Sbjct: 219 SMPGVILGSRLSTKISVKPLQVILAVIICISGLK 252


>gi|238763274|ref|ZP_04624239.1| hypothetical protein ykris0001_28510 [Yersinia kristensenii ATCC
           33638]
 gi|238698547|gb|EEP91299.1| hypothetical protein ykris0001_28510 [Yersinia kristensenii ATCC
           33638]
          Length = 240

 Score = 43.5 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 59/155 (38%), Gaps = 14/155 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  I     ++  + G+ G G  L+  PVL+    +  I             L +I   +
Sbjct: 1   MAAIFSTMVVAYIIFGITGFGSALIASPVLALFIPVAKIVP----------LLAIIDMVA 50

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++ +        ++  LK  + ++ I +++ + ++       L  A  IF +L  I  L
Sbjct: 51  AITNVARHSRHA-DIAELKRLVPLMIIGSLIGATVLLRTRPDILLLALGIFVILYAIYSL 109

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
            R +   + +         +G++ G  S   G GG
Sbjct: 110 NRRKPQGQFQ---PAAAIPFGLIGGIFSALFGSGG 141


>gi|305666470|ref|YP_003862757.1| putative transmembrane protein [Maribacter sp. HTCC2170]
 gi|88708737|gb|EAR00972.1| possible transmembrane protein [Maribacter sp. HTCC2170]
          Length = 257

 Score = 43.5 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 71/202 (35%), Gaps = 14/202 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + L+    F+   L    G+GGG   + +L+          SI         L    
Sbjct: 5   IESLLLLCAGFFVIAVLYSAVGMGGGSSYLALLTLFVASFFAIRSIA--------LVCNL 56

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                S + + +HG   +K    +I        + +     + +           ++  +
Sbjct: 57  IVVSGSTILYFKHGHARLKDFVPFIITSIPMAFLGASF--RLKEEVFFIVLGASLIISSL 114

Query: 140 LML---KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS-IYKA 195
            ++      +     K    Y+ Y+ G   GFLSG +G+GGGIF   ++         K 
Sbjct: 115 FLVWQTSGAKWSEPTKEYPRYLSYVIGASIGFLSGLVGIGGGIFLAPILNHINWDKSVKI 174

Query: 196 TATSAGVSALIAFPALLVRIYS 217
            A ++    + +   +   +YS
Sbjct: 175 AALASFFILVNSISGIGGLLYS 196


>gi|95930597|ref|ZP_01313332.1| protein of unknown function DUF81 [Desulfuromonas acetoxidans DSM
           684]
 gi|95133432|gb|EAT15096.1| protein of unknown function DUF81 [Desulfuromonas acetoxidans DSM
           684]
          Length = 251

 Score = 43.5 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 75/207 (36%), Gaps = 14/207 (6%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGV--GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           ++D I   +VA    G +SG   +  GGG       S     + I   +   VA GT+  
Sbjct: 1   MIDLIWWQLVALAAVGVVSGFLNILAGGG-------SLLTLPLLIFLGLPPTVANGTNRV 53

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            I   ++ +     R G ++ ++         I  V+ + +   +D S   +  A   +L
Sbjct: 54  AIVVQNIFALKSFHRSGVLSWRLALLCSVPAVIGAVIGAQLAVEMDDSLFKQVLAAVMVL 113

Query: 137 MGILMLKRDRLY-----CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
           + +L              +     + +  +   V G   G +  G G     ++L  G  
Sbjct: 114 VLLLTTFDPARRFQGCFSDHPRLRSILLLVGFFVVGLYGGFVQAGVGFLILSVVLMVGLD 173

Query: 192 IYKATATSAGVSALIAFPALLVRIYSG 218
           + +       V  ++  PAL +  ++G
Sbjct: 174 LVQGNVLKVVVVLILNLPALAIFAWNG 200


>gi|229819052|ref|YP_002880578.1| protein of unknown function DUF81 [Beutenbergia cavernae DSM 12333]
 gi|229564965|gb|ACQ78816.1| protein of unknown function DUF81 [Beutenbergia cavernae DSM 12333]
          Length = 261

 Score = 43.5 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 76/220 (34%), Gaps = 27/220 (12%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS-LGVIAPTSVMSFMEHRRHGTINMKILK 101
           GGGL+ +P L            I    A+ T+ LG I  TS  S   + R    ++    
Sbjct: 29  GGGLIQLPALLLV-------PGITPIEALATNKLGSIMGTSTSSI-TYYRRVQPDLTTAA 80

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF-----PDN 156
                        +L+ S +          +  + + +  L R RL    +         
Sbjct: 81  PMALAALAGASGGALLASQIPGELFTPIILVVLVGVFVFTLARPRLGAHTQLRWEGNRHR 140

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
           +     G+  G   G LG G G F  + L+   G +   A+A +  V+    F AL+V +
Sbjct: 141 WTAAGLGVAIGLYDGLLGPGTGTFLVIALVSVLGYAFLPASAIAKIVNFATNFGALVVFV 200

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             G             V  G  L +   +++   +  +++
Sbjct: 201 PHGV------------VLWGLGLCVGAANLVGAYIGARMA 228


>gi|307546896|ref|YP_003899375.1| hypothetical protein HELO_4306 [Halomonas elongata DSM 2581]
 gi|307218920|emb|CBV44190.1| protein of unknown function DUF81 [Halomonas elongata DSM 2581]
          Length = 255

 Score = 43.5 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 63/195 (32%), Gaps = 18/195 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+I+ S L+  +S   GVGGG +++  +++      +     M                 
Sbjct: 17  LLILLSVLTSMISASMGVGGGTLLIMTMAQVMPGAALIPVHGM-----------VQLGSN 65

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                     +   IL  ++    +  +  S M+  +    L  A A F L         
Sbjct: 66  GGRALMTLRHLAWPILAAFVPGALLGALAASWMLVRLPTGLLELAIAGFVLFTLW----- 120

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
                 ++   +    + G +T FLS  +G   G      +  +G S     AT A    
Sbjct: 121 -GPGLPKRSLGSLGTVVAGGITTFLSSLVGA-SGPMVAAFIKQHGGSRQATVATFAACMT 178

Query: 205 LIAFPALLVRIYSGW 219
           L       V   +G+
Sbjct: 179 LQHLTKAFVFGAAGF 193


>gi|85373847|ref|YP_457909.1| hypothetical protein ELI_05100 [Erythrobacter litoralis HTCC2594]
 gi|84786930|gb|ABC63112.1| hypothetical protein ELI_05100 [Erythrobacter litoralis HTCC2594]
          Length = 247

 Score = 43.5 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 85/256 (33%), Gaps = 17/256 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  +  A F++  L    G GGG       S    L G D  +   +    SL       
Sbjct: 3   IVALAAAFFVTALLYASVGFGGGS----TYSALLALAGFDYRLLPVL----SLVCNIAVV 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S +   R G +  +       +     ++  L  + + +        +  +L G+ + 
Sbjct: 55  AGSTIRFGRAGVMPWRGALVLTGIAAPAALLGGL--TPIGEGAFFLLLGVSLILAGLALF 112

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT-ATSAG 201
                  +       +        G+LSG +G+GGGIF   L+     +  ++  AT++ 
Sbjct: 113 VPQNERSDVPSRFAKLLPFAAAPLGYLSGLVGIGGGIFLAPLLHLTRWNQTRSIAATASV 172

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              + +   L  ++            + G   +  ++ ++    + + +A K+   +  +
Sbjct: 173 FILVNSLFGLAGQLLKNGPDTLGSAVTFG---LPLMIAVVIGGQIGSLMALKI---LPPR 226

Query: 262 YLTIGFSMIMFTTSFV 277
            +    + +       
Sbjct: 227 VIRWLTAALTIWVGSR 242


>gi|284030965|ref|YP_003380896.1| hypothetical protein Kfla_3033 [Kribbella flavida DSM 17836]
 gi|283810258|gb|ADB32097.1| protein of unknown function DUF81 [Kribbella flavida DSM 17836]
          Length = 258

 Score = 43.5 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 102/270 (37%), Gaps = 25/270 (9%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
            D  +  I  +++A+F +G +  + G GGGL+ +P +     L+G+ ++    + + T+ 
Sbjct: 2   PDVSLWTIVFLVIAAFSAGWIDAVVG-GGGLIQLPAM-----LLGLPNASPAQI-LSTNK 54

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                 +  S +        + + +     +  +     +L+ + +  ++      +  +
Sbjct: 55  ISSLCGTATSAVTFGVKVRPDRRTVVPLALLAGLGAAAGALVATKIPMAWFKPIVLVLLI 114

Query: 136 LMGILMLKRDRLYCERKFP-----DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYG 189
            + +    +  L                    G++ GF  GA+G G G F    ++   G
Sbjct: 115 AVAVYTAVKPTLGALTALRFDGRNHYVAAGAVGLLIGFYDGAVGPGTGSFLIFALVGLLG 174

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
            +  +A+A +   +      A+ V    G      P W LG       LI+   ++L   
Sbjct: 175 YNFLQASAKAKIANVATNLGAIAVFAAGG-----APLWRLG-------LIMGAANMLGGL 222

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           L  + +   G +++ I F +++       A
Sbjct: 223 LGARTAVARGSRFVRIIFLVVVSALILRLA 252


>gi|257888750|ref|ZP_05668403.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
 gi|257824804|gb|EEV51736.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
          Length = 258

 Score = 43.5 bits (102), Expect = 0.034,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 94/265 (35%), Gaps = 31/265 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L       + T+  + G+GGG+++ PVL           S    VA+ T        S+
Sbjct: 4   ILYFFVIIAANTIGAVSGMGGGVIIKPVLDFIGYHSVSAISFYSTVAVFTM-------SI 56

Query: 84  MSFMEHRRHGT-INMKILKDWIFVLPITTVVTSLMISHVDK--------SFLNKAFAIFC 134
            S +   + G  I   I+           +  +L+   +           FL     I  
Sbjct: 57  SSTVRQLKSGQKIRFAIVLWVSSGAIAGGIAGNLLFEQLLLFFEDETTVQFLQIILTIAS 116

Query: 135 LLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIY 193
           L+     L    ++   +    +     G++ GFL+  LG+GGG     LLML +   I 
Sbjct: 117 LIFAF--LYTRNIWKGFQLSSFFSYLTCGLILGFLAIFLGIGGGPINVSLLMLMFHFKIK 174

Query: 194 KATATSAGVSALIAFPALLV-RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           +A   S           L+   + SG+    L            +L I+P ++L   L  
Sbjct: 175 EAVIYSICTIFFSQLAKLVSIFLGSGFAQFDLS----------MLLYIVPAALLGGVLGV 224

Query: 253 KLSYMIGKKYLTIGF-SMIMFTTSF 276
            LS  +  + +T  F  +I+   + 
Sbjct: 225 YLSKFLSSEKVTFVFQGVILLVLAI 249



 Score = 36.6 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 42/121 (34%), Gaps = 11/121 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM- 84
            +    + G L+   G+GGG + V +L   F          +  A+  S+  I  + +  
Sbjct: 139 YLTCGLILGFLAIFLGIGGGPINVSLLMLMFHF-------KIKEAVIYSICTIFFSQLAK 191

Query: 85  --SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF-AIFCLLMGILM 141
             S          ++ +L   +    +  V+   +   +    +   F  +  L++ I +
Sbjct: 192 LVSIFLGSGFAQFDLSMLLYIVPAALLGGVLGVYLSKFLSSEKVTFVFQGVILLVLAINI 251

Query: 142 L 142
            
Sbjct: 252 Y 252


>gi|300811949|ref|ZP_07092409.1| putative membrane protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300497066|gb|EFK32128.1| putative membrane protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 246

 Score = 43.5 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 76/258 (29%), Gaps = 24/258 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              +I+   L+G ++ +  +   LV  P L   F L  +  ++       T+   +  T 
Sbjct: 3   FIYLIILGVLAGIVAAVASM-ASLVSYPGLL-LFGLSPVSANM-------TNTAALVTTG 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S     +    +   L  + F      ++   ++         K    F L    L+L
Sbjct: 54  FGSLSSCLKEMRGHWGELWRYAFFQLTGALIGGWLLVQFPGKIFQKLVPFFVLFSAGLLL 113

Query: 143 KRDRLYCERKF--PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT-ATS 199
              R    ++         Y    V G  +G  G   G+ T + +     S +    A  
Sbjct: 114 YSGRQKHPKQATKLGRIGAYFGLFVAGIYAGYFGAASGVLTLIFLTALSDSSFVVINAIK 173

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           + + +L    AL +  + G             VN      +     +      K+   + 
Sbjct: 174 SVIGSLANLVALALFAFKGG------------VNWPVAFPLAIGLFIGGYFGQKMIKYLK 221

Query: 260 KKYLTIGFSMIMFTTSFV 277
             ++    +      +  
Sbjct: 222 PAWVRWITACFSVLLAIY 239



 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
              F++G  +G FG   G     VL+  F     D S  +  A+ + +G +A    ++  
Sbjct: 134 FGLFVAGIYAGYFGAASG-----VLTLIFLTALSDSSFVVINAIKSVIGSLANLVALALF 188

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                G +N  +       L I       MI ++  +++    A F +L+ I +
Sbjct: 189 AF--KGGVNWPVAFPLAIGLFIGGYFGQKMIKYLKPAWVRWITACFSVLLAIYL 240


>gi|302387239|ref|YP_003823061.1| protein of unknown function DUF81 [Clostridium saccharolyticum WM1]
 gi|302197867|gb|ADL05438.1| protein of unknown function DUF81 [Clostridium saccharolyticum WM1]
          Length = 181

 Score = 43.5 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 58/172 (33%), Gaps = 16/172 (9%)

Query: 111 TVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV------KYIWGM 164
            V+   +   + +S +     +  LL GI +L R     E       +        + G 
Sbjct: 14  AVLGVRLNLIIPESTVKILLFMVVLLSGISILLRKDQTEEEGNKGYVISDHLAATMVLGF 73

Query: 165 VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
           VTG +    G GG +    L++  G  I  A   +   S  I  PA +  +      + L
Sbjct: 74  VTGMICALSGAGGPVLVMPLLVVLGIGIRTAVGVALFNSVFIGIPACIGYMMQCDMKSLL 133

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           P  +   V  G          +     ++ +  I + +L  G ++     + 
Sbjct: 134 PVMAAALVFHG----------VGVSFGSRNAVRINQNFLKKGIAVFSILIAL 175


>gi|294944275|ref|XP_002784174.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239897208|gb|EER15970.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 393

 Score = 43.5 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 6/93 (6%)

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           ++   L+   G+GGGI    ++   G     +A+ATS  + A     + ++  ++ W   
Sbjct: 17  VIIALLASPAGIGGGILFTPVLHLVGELDSKEASATSQALIAASQLASCIINFWTQWHEP 76

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             P      + +  V+I+LP  +    +   L+
Sbjct: 77  KKP-----LIILPYVIIMLPCIVAGAVIGVYLN 104



 Score = 42.8 bits (100), Expect = 0.056,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 32/60 (53%)

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
           + TG +S  +G+GGGI  N ++L +G +  + TAT+A     ++    L    SG+   G
Sbjct: 260 VFTGIISSMVGIGGGILMNPIILDFGLNPQQGTATNAINIFAMSTSTALSYGMSGYFPGG 319


>gi|71279800|ref|YP_270018.1| hypothetical protein CPS_3342 [Colwellia psychrerythraea 34H]
 gi|71145540|gb|AAZ26013.1| putative membrane protein [Colwellia psychrerythraea 34H]
          Length = 255

 Score = 43.5 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 14/158 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+   S ++G L GL G G G++M                + +   +  ++ VI 
Sbjct: 14  ISTLVLLFFTSLIAGFLRGLAGFGSGMLM-----------AGPMVLLIEPTIAVAIIVIL 62

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+   +       +N +++K  +           L +  +      +  ++  +   I
Sbjct: 63  EASISVPLIKTAKQDVNWRLVKRLLLGAVFLAPFGVLALQVMSAQSAGQVISLLVVTAAI 122

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
            +L   +    R+      +   G V+GF  G  G+ G
Sbjct: 123 ALLCGYQ---RRRATTKVKEVTVGGVSGFCCGMAGISG 157


>gi|56461450|ref|YP_156731.1| permease [Idiomarina loihiensis L2TR]
 gi|56180460|gb|AAV83182.1| Predicted permease [Idiomarina loihiensis L2TR]
          Length = 252

 Score = 43.5 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 61/185 (32%), Gaps = 16/185 (8%)

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
             I+   +  ++    + T + SL++  +   FL    A+F +               + 
Sbjct: 66  KHIHWPTVAWFVPFGLLGTFIGSLLLVQLPTHFLQITIALFLI------WLTWGPKLPQS 119

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
           F         G+VTGF+S  +G  G +    +   +   +    AT + V  +   P  L
Sbjct: 120 FRGRAGLVGGGLVTGFISLFVGASGPLVAAFVKARFSQRMQT-VATFSAVMTMQHAPKAL 178

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           V   +G+              +  VL ++      T +       I  +     F +I+ 
Sbjct: 179 VFGIAGFVFQD---------WLPLVLAMIAAGFAGTWIGLHWLKKITDQRFDQLFRLIIT 229

Query: 273 TTSFV 277
             +  
Sbjct: 230 LLALR 234


>gi|326779502|ref|ZP_08238767.1| protein of unknown function DUF81 [Streptomyces cf. griseus
           XylebKG-1]
 gi|326659835|gb|EGE44681.1| protein of unknown function DUF81 [Streptomyces cf. griseus
           XylebKG-1]
          Length = 263

 Score = 43.5 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 49/159 (30%), Gaps = 11/159 (6%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+  V    +  + +   R   + + +      +    ++  +   + +    L    
Sbjct: 50  LGTNKAVAIVGTSGAAVTFLRKAPVRVGLAVRVGLMALAGSMAGAFFAAGISSEVLRPVI 109

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKY----------IWGMVTGFLSGALGVGGGIF 180
            +  L +   +L R                          + G   GF  G  G G G F
Sbjct: 110 MVVLLGVAAFVLLRPSFGTAPADDGAARPVARSRIVTAIVLVGGGIGFYDGLFGPGTGTF 169

Query: 181 TNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
             L +       +  A+AT+  V+      AL +  Y G
Sbjct: 170 LVLALSAVLHLDLVTASATAKIVNVCTNAGALAMFAYQG 208


>gi|297561163|ref|YP_003680137.1| hypothetical protein Ndas_2209 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296845611|gb|ADH67631.1| protein of unknown function DUF81 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 255

 Score = 43.5 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 71/192 (36%), Gaps = 19/192 (9%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+       +  + + + R   I+ +++     +  + + + + M + +    L    
Sbjct: 47  LGTNKLGAVFGTTSAALAYARKVRIDRRVVAPTAALALLGSGLGAAMAAALTADVLKPVI 106

Query: 131 AIFCLLMGILMLKRD--RLYCERKFPDN----YVKYIWGMVTGFLSGALGVGGGIFTNLL 184
            +    + +++  R    +  +R+         V  + G+   F  G +G G G+F  + 
Sbjct: 107 MVVLAGVALMVYFRPAMGVASDRRLRTRNRALAVVAVAGLGVSFYDGLIGPGTGVFLIIA 166

Query: 185 MLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
                G    +A+A++  V+      AL+V                G ++    L +   
Sbjct: 167 FTAVVGMDFVEASASAKIVNVCTNLGALVVFGLG------------GHIDWLLGLGLAVC 214

Query: 244 SILITPLATKLS 255
           +I+   +  +++
Sbjct: 215 TIIGAQIGARMA 226


>gi|317499606|ref|ZP_07957869.1| hypothetical protein HMPREF0996_02853 [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|291559726|emb|CBL38526.1| Predicted permeases [butyrate-producing bacterium SSC/2]
 gi|316893155|gb|EFV15374.1| hypothetical protein HMPREF0996_02853 [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 247

 Score = 43.5 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 59/161 (36%), Gaps = 5/161 (3%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             +  H A+ T+    +  +  + +   + G IN  I         + + + + +  + +
Sbjct: 35  AGLPPHRAIATNKLSSSMGTAAATVRFAKMGHINFNIALSCSVTAILGSFLGASLSVYTN 94

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW----GMVTGFLSGALGVGGG 178
           +  +     +   ++ + +L   + +       +   YI       V G   G  G G G
Sbjct: 95  ERIIQIFILVLLPILFVYLLFTKKDFDSFVLEISKSTYIASILSAFVIGIYDGFYGPGTG 154

Query: 179 IFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
            F  L +  + G  +  A+  +  ++ +    AL+  ++ G
Sbjct: 155 TFLLLCLTRFAGLDVLTASGVTKFINLVTNLTALVTFLFYG 195


>gi|282897325|ref|ZP_06305327.1| hypothetical protein CRD_02249 [Raphidiopsis brookii D9]
 gi|281197977|gb|EFA72871.1| hypothetical protein CRD_02249 [Raphidiopsis brookii D9]
          Length = 257

 Score = 43.5 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 77/215 (35%), Gaps = 18/215 (8%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           + ++  + +  L++  +F++G L+ + G GG  +  P L            I    A  +
Sbjct: 1   MPQNLDLFHSFLLLTTAFVAGALNAVAG-GGSFITFPTLVFL--------GIAPINANAS 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +   +   S+ S   +R +  I  +          I  V+ S+++ +  ++         
Sbjct: 52  NNTALWIASMASASAYRHNLNIPKQQFLVLCLTSLIGGVIGSVILLYTSQNVFKNLLPYL 111

Query: 134 CLLMGILM--------LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
            L   ++           + +       P  +V  I  +      G  G G GI     +
Sbjct: 112 LLSATLIFTFSDIFRKWLQFKSQRSFDKPPLWVLVIAQLGISIYGGFFGAGLGILMLATL 171

Query: 186 LFYGA-SIYKATATSAGVSALIAFPALLVRIYSGW 219
            F G  +I+   A  A + + I   A+   IY+G 
Sbjct: 172 SFLGIKNIHSMNAFKAFLGSCINGIAIFPFIYAGL 206


>gi|254382904|ref|ZP_04998260.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194341805|gb|EDX22771.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 258

 Score = 43.5 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 56/155 (36%), Gaps = 7/155 (4%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+  V    +  + + + R   +++K+           ++  + +   + K  L    
Sbjct: 50  LGTNKAVAIVGTAGAAVTYARKAPVDVKLAVRIGLAALAGSMGGAALAGGISKDALRPLI 109

Query: 131 AIFCLLMGILMLKRDRL------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
            +  +++   ++ R             +        + G+  GF  G +G G G F  L 
Sbjct: 110 MLVLVVVAGFVIFRPAFGTAPGATPVSRQRVLLAIGLAGLGIGFYDGLIGPGTGTFLVLA 169

Query: 185 ML-FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           +       +  A+AT+  V+      AL +  Y G
Sbjct: 170 LTALLHLDLVTASATAKIVNCCTNAGALAMFAYQG 204


>gi|78065408|ref|YP_368177.1| hypothetical protein Bcep18194_A3934 [Burkholderia sp. 383]
 gi|77966153|gb|ABB07533.1| protein of unknown function DUF81 [Burkholderia sp. 383]
          Length = 262

 Score = 43.5 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 59/268 (22%), Positives = 92/268 (34%), Gaps = 31/268 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  ++    G L GL GVGGG +M P+L   F        +    A+GT L   A T  
Sbjct: 8   LLYSLSGLFVGILVGLTGVGGGSLMTPILVLLF-------GVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSL------MISHVDKSFLNKAFAIFCLLM 137
              + H   G+I+ +I             VT        M S      +     +  LL 
Sbjct: 61  TGTLVHGLKGSIDWRITGRLAAGSVPAAAVTLWWLHTHGMNSPGTARMIQLVLGVALLLT 120

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            + ++ R                    +   + G V G L     VG G     ++L   
Sbjct: 121 SLALIFRPQLTAFAARNPLAPSPARTLWSTVLTGAVLGVLVSMTSVGAGAIGVTVLLL-- 178

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +Y A AT+  V + IA    L        + G+  W LG V+   +L +L  S+    
Sbjct: 179 --LYPALATTRIVGSDIAHAVPLTL------VAGMGHWLLGSVDWSMLLSLLLGSLPGIV 230

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L + LS    ++ L    +  +      
Sbjct: 231 LGSLLSARAPERLLRNLLAATLVAVGIR 258



 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 49/117 (41%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  +  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 151 VLTGAVLGVLVSMTSVGAGAIGVTVLLLLY------PALATTRIVGSDIAHAVPLTLVAG 204

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M H   G+++  +L   +       V+ SL+ +   +  L    A   + +GI ++ 
Sbjct: 205 MGHWLLGSVDWSMLLSLLLGSLPGIVLGSLLSARAPERLLRNLLAATLVAVGIRLVL 261


>gi|33863490|ref|NP_895050.1| hypothetical protein PMT1221 [Prochlorococcus marinus str. MIT
           9313]
 gi|33640939|emb|CAE21396.1| Domain of unknown function DUF81 [Prochlorococcus marinus str. MIT
           9313]
          Length = 248

 Score = 43.5 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 66/174 (37%), Gaps = 9/174 (5%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
               MG+      H A+ TS   I PT++   + H   G   ++          +++++ 
Sbjct: 27  LLLWMGLSP----HQALATSTFAIVPTALSGSLTHLFAGGFQLQAGLSIAVAAFLSSLLF 82

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN---YVKYIWGMVTGFLSG 171
           S +   V   +L   F +   L+    ++ +     ++           + G V GF +G
Sbjct: 83  SKIGLDVSG-WLLLTFQVGLYLVVAATIRSEPQQAAQQLKSTLFLPGLALVGGVAGFSAG 141

Query: 172 ALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            LG+GGG+    LM+      I+ A   S       A  A L  +  G G  G+
Sbjct: 142 LLGLGGGLLMVPLMVNGLAVPIHLAIRLSTLAVTCSATAASLQFLSEGRGSVGI 195


>gi|257051935|ref|YP_003129768.1| protein of unknown function DUF81 [Halorhabdus utahensis DSM 12940]
 gi|256690698|gb|ACV11035.1| protein of unknown function DUF81 [Halorhabdus utahensis DSM 12940]
          Length = 317

 Score = 43.5 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 72/259 (27%), Gaps = 50/259 (19%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                   +   +    A+G  L             + + G ++    K  +      TV
Sbjct: 65  LFFSPFFMLGVGLTPAQAIGAGLLTEVFGMGNGLRSYVKQGVVDYDTAKWLLAGAVPATV 124

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK-------------------- 152
           V +L+   VD + L   F    + +G  ++  D                           
Sbjct: 125 VGALLAHAVDPTLLKLLFGAGLIALGAFLVYYDPPEDCEPGEGEGKFLEAQNTGRGTTTI 184

Query: 153 ---------------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
                           P   +  + G +TG +S  L     I T  L++        A A
Sbjct: 185 EAADGETFTYETCWRAPGLTLSTVGGFITGLISAGLP---EIVTTQLIVRCRLPPRVAVA 241

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           TS     + A    LV   S   +  +  WS+            P  ++   + +++   
Sbjct: 242 TSVFTLGIAAGAGALVHALSASPVWYVVAWSI------------PGVLVGGTIGSRVGKY 289

Query: 258 IGKKYLTIGFSMIMFTTSF 276
           +    + +G  ++      
Sbjct: 290 VPGDLMEVGLGIVFGLVGA 308



 Score = 38.5 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 30/78 (38%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +   VA+ TS+  +   +    + H    +    ++   I  + +   + S +  +V   
Sbjct: 234 LPPRVAVATSVFTLGIAAGAGALVHALSASPVWYVVAWSIPGVLVGGTIGSRVGKYVPGD 293

Query: 125 FLNKAFAIFCLLMGILML 142
            +     I   L+G L+L
Sbjct: 294 LMEVGLGIVFGLVGALVL 311


>gi|221214347|ref|ZP_03587318.1| putative membrane protein [Burkholderia multivorans CGD1]
 gi|221165604|gb|EED98079.1| putative membrane protein [Burkholderia multivorans CGD1]
          Length = 262

 Score = 43.5 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 92/268 (34%), Gaps = 31/268 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  ++    G L GL GVGGG +M P+L   F        +    A+GT L   A T  
Sbjct: 8   LLYSLSGLFVGILVGLTGVGGGSLMTPILVLLF-------GVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH------VDKSFLNKAFAIFCLLM 137
              + H   G+I+ +I             +T  ++             +     +  LL 
Sbjct: 61  TGTLVHGLKGSIDWRITGRLAAGSVPAAALTLWVLHSHGLNAPGTARLIQLVLGVALLLT 120

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            + ++ R                    +   + G V G L     VG G     ++L   
Sbjct: 121 SVALIFRPQLAAFAARNPLAPSPARTLWSTVLTGAVLGVLVSMTSVGAGAIGVTVLLL-- 178

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +Y A AT+  V + IA    L        + G+  W LG V+   +L +L  S+    
Sbjct: 179 --LYPALATTRIVGSDIAHAVPLTL------VAGMGHWLLGSVDWSMLLSLLLGSLPGIV 230

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + + LS    ++ L    +  +      
Sbjct: 231 IGSLLSARAPERLLRNLLAATLVAVGVR 258



 Score = 38.9 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 49/117 (41%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  +  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 151 VLTGAVLGVLVSMTSVGAGAIGVTVLLLLY------PALATTRIVGSDIAHAVPLTLVAG 204

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M H   G+++  +L   +       V+ SL+ +   +  L    A   + +G+ ++ 
Sbjct: 205 MGHWLLGSVDWSMLLSLLLGSLPGIVIGSLLSARAPERLLRNLLAATLVAVGVRLVL 261


>gi|182438847|ref|YP_001826566.1| hypothetical protein SGR_5054 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178467363|dbj|BAG21883.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 263

 Score = 43.5 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 49/159 (30%), Gaps = 11/159 (6%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+  V    +  + +   R   + + +      +    ++  +   + +    L    
Sbjct: 50  LGTNKAVAIVGTSGAAVTFLRKAPVRVGLAVRVGLMALAGSMAGAFFAAGISSEVLRPVI 109

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVK----------YIWGMVTGFLSGALGVGGGIF 180
            +  L +   +L R                          + G   GF  G  G G G F
Sbjct: 110 MVVLLGVAAFVLLRPSFGTAPADDGAARPMARSRIVTAIVLVGGGIGFYDGLFGPGTGTF 169

Query: 181 TNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
             L +       +  A+AT+  V+      AL +  Y G
Sbjct: 170 LVLALSAVLHLDLVTASATAKIVNVCTNAGALAMFAYQG 208


>gi|320109326|ref|YP_004184916.1| hypothetical protein AciPR4_4176 [Terriglobus saanensis SP1PR4]
 gi|319927847|gb|ADV84922.1| protein of unknown function DUF81 [Terriglobus saanensis SP1PR4]
          Length = 122

 Score = 43.5 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 34/89 (38%), Gaps = 1/89 (1%)

Query: 54  KAFQLMGIDDSICMHVAMGTSLGVIA-PTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                +     +    A GTS+  +  P  + +F  + + G +++K+         +   
Sbjct: 30  FLIPALVFFYGMSQKTAQGTSVATLLLPIGMFAFWTYYKAGHVDLKLALWIAAGFSVGGW 89

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  L   H+    L + FA+  + + I +
Sbjct: 90  LGGLWAQHLSDVALRRGFAVLLVTLAIKL 118


>gi|291545652|emb|CBL18760.1| Predicted permeases [Ruminococcus sp. SR1/5]
          Length = 145

 Score = 43.5 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 53/131 (40%), Gaps = 9/131 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    ++    FL+G +  + G GGGL+ +P    A         + +H A+ T+    A
Sbjct: 5   IYTFLIVCPLVFLAGFVDAVAG-GGGLISLPAYLLA--------GVPVHNAVATNKLSSA 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +++S +   ++  ++  ++   I +  + + + + +        L         ++  
Sbjct: 56  TGTLISTVRLCKNKFVDWILVLPCIPMALLGSSIGAHLALIASDKLLRYMLIPVLPVVAF 115

Query: 140 LMLKRDRLYCE 150
            +L++  +  +
Sbjct: 116 YVLRKKNMDEK 126



 Score = 38.5 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 19/117 (16%)

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT---SAGVSALIAFPALLVRIYSGWG 220
            + GF+    G GGG+ +    L  G  ++ A AT   S+    LI+   L         
Sbjct: 16  FLAGFVDAVAG-GGGLISLPAYLLAGVPVHNAVATNKLSSATGTLISTVRLCKNK----- 69

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                     FV+   VL  +P+++L + +   L+ +   K L      ++   +F 
Sbjct: 70  ----------FVDWILVLPCIPMALLGSSIGAHLALIASDKLLRYMLIPVLPVVAFY 116


>gi|304310423|ref|YP_003810021.1| GGDEF precursor [gamma proteobacterium HdN1]
 gi|301796156|emb|CBL44362.1| GGDEF precursor [gamma proteobacterium HdN1]
          Length = 664

 Score = 43.5 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 53/155 (34%), Gaps = 17/155 (10%)

Query: 31  FLSGTLSGLFGVG--GGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
            LS + +G+ G+G   G ++V VL   F  + + ++  ++  +  S   +   S+     
Sbjct: 183 LLSASQAGMLGLGIFYGTMIVMVLYNLFLYLAVREASYLYYVLYVSCMALFLASLNGVSY 242

Query: 89  HRRHGTINMKILKDW----IFVLPITTVVTSLMISH----VDKSFLNK--AFAIFCLLMG 138
                         W    I       ++ S + +     +  +       F +  ++  
Sbjct: 243 QY-----LWPESIWWNDQSIPFFLSGVILFSALFTLKFLRLSTTLPRVNHLFTVIVIISF 297

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGAL 173
           I+M                +  ++G + G ++G +
Sbjct: 298 IVMAATLFAPYSIMIRVVIIWAVFGTIVGLITGMV 332


>gi|284046483|ref|YP_003396823.1| hypothetical protein Cwoe_5037 [Conexibacter woesei DSM 14684]
 gi|283950704|gb|ADB53448.1| protein of unknown function DUF81 [Conexibacter woesei DSM 14684]
          Length = 137

 Score = 43.5 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 33/97 (34%), Gaps = 7/97 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            +MVP+L                 A  TSLG I P +++S         I+++       
Sbjct: 45  TIMVPLLVFW-------AGYAQRDAHATSLGAIIPIAIVSAATLGAGAHIDVRAAVFLTI 97

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
              I     +  ++  D   L   F  F L    LML
Sbjct: 98  GAVIGARYGAKALARADDRKLQWLFGCFLLAAAFLML 134


>gi|268680798|ref|YP_003305229.1| hypothetical protein Sdel_2182 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268618829|gb|ACZ13194.1| protein of unknown function DUF81 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 244

 Score = 43.1 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 77/182 (42%), Gaps = 6/182 (3%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT 94
            +S LF +GG    V  L      +G+       +A    L     +++ + + +    +
Sbjct: 12  VISTLFSIGGTGSAV-ALIPVLSFLGVGFD----LAKAVGLFANTASTIGASVMNALRKS 66

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
           I++K +  ++ +  + + + + + + +D  ++   FA+F L    +M  + +      + 
Sbjct: 67  IDVKHVLPFVLMSVVCSPLGAYVSTRIDVHWVKILFALFLLFSATMMFIQKK-KGAFTYT 125

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
             +     G + GFLSG LG+GGG     L+++ G    +   T + +       A +  
Sbjct: 126 KMWFMVCMGGIVGFLSGLLGIGGGAMIIPLLIYLGYDAKQTAITVSFMIPFSTLSAFITY 185

Query: 215 IY 216
           +Y
Sbjct: 186 VY 187


>gi|161525712|ref|YP_001580724.1| hypothetical protein Bmul_2543 [Burkholderia multivorans ATCC
           17616]
 gi|189349566|ref|YP_001945194.1| putative permease [Burkholderia multivorans ATCC 17616]
 gi|160343141|gb|ABX16227.1| protein of unknown function DUF81 [Burkholderia multivorans ATCC
           17616]
 gi|189333588|dbj|BAG42658.1| predicted permease [Burkholderia multivorans ATCC 17616]
          Length = 262

 Score = 43.1 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 56/268 (20%), Positives = 92/268 (34%), Gaps = 31/268 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  ++    G L GL GVGGG +M P+L   F        +    A+GT L   A T  
Sbjct: 8   LLYSLSGLFVGILVGLTGVGGGSLMTPILVLLF-------GVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH------VDKSFLNKAFAIFCLLM 137
              + H   G+I+ +I             VT  ++             +     +  LL 
Sbjct: 61  TGTLVHGLKGSIDWRITGRLAAGSVPAAAVTLWVLHSHGLNAPGTARLIQLVLGVALLLT 120

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            + ++ R                    +   + G V G L     VG G     ++L   
Sbjct: 121 SVALIFRPQLAAFAARNPLAPSPARTLWSTVLTGAVLGVLVSMTSVGAGAIGVTVLLL-- 178

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +Y A AT+  V + IA    L        + G+  W LG V+   +L +L  S+    
Sbjct: 179 --LYPALATTRIVGSDIAHAVPLTL------VAGMGHWLLGSVDWSMLLSLLLGSLPGIV 230

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + + LS    ++ L    +  +      
Sbjct: 231 IGSLLSARAPERLLRNLLAATLVAVGVR 258



 Score = 38.9 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 49/117 (41%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  +  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 151 VLTGAVLGVLVSMTSVGAGAIGVTVLLLLY------PALATTRIVGSDIAHAVPLTLVAG 204

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M H   G+++  +L   +       V+ SL+ +   +  L    A   + +G+ ++ 
Sbjct: 205 MGHWLLGSVDWSMLLSLLLGSLPGIVIGSLLSARAPERLLRNLLAATLVAVGVRLVL 261


>gi|89901232|ref|YP_523703.1| hypothetical protein Rfer_2455 [Rhodoferax ferrireducens T118]
 gi|89345969|gb|ABD70172.1| protein of unknown function DUF81 [Rhodoferax ferrireducens T118]
          Length = 263

 Score = 43.1 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 48/116 (41%), Gaps = 6/116 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + GTL  L  VG G + V VL   + L+ +   +   +A         P ++++ 
Sbjct: 152 LLFGAVIGTLVTLTSVGAGAIGVTVLMVLYPLLPLPRIVAADIAYA------VPLTLVAG 205

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + H   G+++  +L   +        V S ++S + +  +    ++     G  ++
Sbjct: 206 LGHASLGSVDWPLLAKLLAGSIPGIWVGSHLMSRIPERMIRSLLSVLLAYAGTKLI 261



 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 80/248 (32%), Gaps = 36/248 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L   F        +  ++A+GT L   A T +   ++  R   +  +++      
Sbjct: 27  LMTPILIFVF-------GVKPYMAVGTDLLFAAFTKMGGTVKMARARQVEWRVVFHLSAG 79

Query: 107 LPITTVVTSLM----------ISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER----- 151
                ++T L+          + H+  S L  A  +         ++             
Sbjct: 80  SIPAALITLLILNRVGAASAHVQHLMTSTLGVALLLTAAATLYKAMRGKAAPTSVARGQE 139

Query: 152 ----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
               K     +  ++G V G L     VG G     +++     +         +     
Sbjct: 140 ALAAKPLHWSLPLLFGAVIGTLVTLTSVGAGAIGVTVLMVL-YPL---------LPLPRI 189

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
             A +        + GL   SLG V+   +  +L  SI    + + L   I ++ +    
Sbjct: 190 VAADIAYAVPLTLVAGLGHASLGSVDWPLLAKLLAGSIPGIWVGSHLMSRIPERMIRSLL 249

Query: 268 SMIMFTTS 275
           S+++    
Sbjct: 250 SVLLAYAG 257


>gi|56459863|ref|YP_155144.1| permease [Idiomarina loihiensis L2TR]
 gi|56178873|gb|AAV81595.1| Predicted permease [Idiomarina loihiensis L2TR]
          Length = 240

 Score = 43.1 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 83/243 (34%), Gaps = 26/243 (10%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR-HG 93
            + G+ G G GL+ VP+L+  F +  +  ++                 V+    + +   
Sbjct: 15  LVQGVSGFGSGLLAVPILALWFPISVLTPALS------------VINIVIGGWIYWKNRE 62

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
                  K  IF   I ++V+  ++  V++ F+        L + + +    +L      
Sbjct: 63  AARPSQWKWLIFSGVIASLVSGSLLLSVNEQFIKLILGFVILAVALALASGKQLSTAEHA 122

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
           P +      G  +G L+G + +GG     L +        +  AT +     IA   +  
Sbjct: 123 PGH---IAVGTGSGLLNGLMTLGG-PPIVLFLANARIPKQQFRATLSLFFCCIAMANVAN 178

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
                              ++  VL +LP +++   +  +L   + ++        +M  
Sbjct: 179 FSRQSIYAEP---------HLYLVLALLPCALIGASVGQRLQQHVSEQRFRQFTLALMIL 229

Query: 274 TSF 276
           +  
Sbjct: 230 SGL 232


>gi|300087997|ref|YP_003758519.1| hypothetical protein Dehly_0896 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527730|gb|ADJ26198.1| protein of unknown function DUF81 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 278

 Score = 43.1 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 84/261 (32%), Gaps = 34/261 (13%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
            FG+GG ++  P  + A  L        + VA+   L +        F+   R   +N  
Sbjct: 22  FFGIGGAVLFSPFFALALSL-------RIDVAIALGLLIEVAGFGSGFIGFMRKKLVNFH 74

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP---- 154
           +    + +  +  VV + +  ++    L    A+  L + +  L+++        P    
Sbjct: 75  LGTRLLPLTVLFAVVGAFVGKNLPPHILEYGLAVLLLGLAVAFLRKESGVTPTNTPLHPH 134

Query: 155 ------------------DNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
                                V ++   V G + G +  G G       +   G S   A
Sbjct: 135 DTAEAIKKYRYDYWRDFRREPVLFLSSAVGGTMVGLVSSGLGEINGYNFVKKLGMSPAMA 194

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             TS  V A+ A  A L  I      +      +G + + A    +P  I+   +   LS
Sbjct: 195 AGTSVFVIAVTALTASLFNISYFTAASAEDIRVIGHIALFA----VPGVIVGAQVGIALS 250

Query: 256 YMIGKKYLTIGFSMIMFTTSF 276
             I ++ L       +     
Sbjct: 251 RHIDRQKLAFFLPWFLAILGI 271


>gi|171319272|ref|ZP_02908387.1| protein of unknown function DUF81 [Burkholderia ambifaria MEX-5]
 gi|171095529|gb|EDT40494.1| protein of unknown function DUF81 [Burkholderia ambifaria MEX-5]
          Length = 262

 Score = 43.1 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 59/268 (22%), Positives = 92/268 (34%), Gaps = 31/268 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  ++    G L GL GVGGG +M P+L   F        +    A+GT L   A T  
Sbjct: 8   LLYSLSGLFVGILVGLTGVGGGSLMTPILVLLF-------GVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI------SHVDKSFLNKAFAIFCLLM 137
              + H   G+I+  I             VT  ++      S      +     I  LL 
Sbjct: 61  TGTLVHGLKGSIDWHITGRLAAGSVPAAAVTLWVLHTHGVNSPGTARMIQLVLGIALLLT 120

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            + ++ R                    +   + G V G L     VG G     ++L   
Sbjct: 121 SLALIFRPQLTALAARNPLVPSPTRTLWSTVLTGAVLGVLVSMTSVGAGAIGVTVLLL-- 178

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +Y A AT+  V + IA    L        + G+  W LG V+   +L +L  S+    
Sbjct: 179 --LYPALATTRIVGSDIAHAVPLTL------VAGMGHWLLGSVDWSMLLSLLLGSLPGIV 230

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L + LS    ++ L    +  +      
Sbjct: 231 LGSVLSARAPERLLRNLLAATLVAVGVR 258



 Score = 38.9 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 49/117 (41%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  +  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 151 VLTGAVLGVLVSMTSVGAGAIGVTVLLLLY------PALATTRIVGSDIAHAVPLTLVAG 204

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M H   G+++  +L   +       V+ S++ +   +  L    A   + +G+ ++ 
Sbjct: 205 MGHWLLGSVDWSMLLSLLLGSLPGIVLGSVLSARAPERLLRNLLAATLVAVGVRLVL 261


>gi|258646062|ref|ZP_05733531.1| putative membrane protein [Dialister invisus DSM 15470]
 gi|260403434|gb|EEW96981.1| putative membrane protein [Dialister invisus DSM 15470]
          Length = 251

 Score = 43.1 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 76/204 (37%), Gaps = 14/204 (6%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            ++ YI +  +  FL+G +  + G GGGL+ +P    A         I +H ++ T+   
Sbjct: 2   DLLTYIIICPLV-FLAGFVDAVAG-GGGLISLPAYIIA--------GIPVHNSIATNKLS 51

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
               ++++  +  + G I  K     +      + + + +   +D      A      + 
Sbjct: 52  SCMGTLLTTGKFAKDGLIPWKPALAGVIFAFAGSSLGAHIALILDARIFMTAMLFILPIT 111

Query: 138 GILMLKRDRLYCERKFP---DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIY 193
              + ++  +  +  FP      +      V G   G  G G G F  LL++      + 
Sbjct: 112 AFYVTRKKSMAEKEPFPFQKTVLLSCTMAFVIGIYDGFYGPGTGTFLILLLMGVAHVRLK 171

Query: 194 KATATSAGVSALIAFPALLVRIYS 217
           +A   +  ++      AL V + +
Sbjct: 172 EANGITKVINGTTNLAALFVFLAN 195


>gi|268590264|ref|ZP_06124485.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
 gi|291314548|gb|EFE55001.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
          Length = 260

 Score = 43.1 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 102/274 (37%), Gaps = 38/274 (13%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I   +    L G +    GVGGG++++P+L+  F L  +        A+ T+  +    
Sbjct: 1   MIVTELAIGALIGLIISTTGVGGGVIVLPILTYFFGLNALA-------AVATANFLSMLM 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK---------------SFL 126
            V S   H R G I  K     + ++  +T ++SL ++ +                    
Sbjct: 54  KVSSSYMHFRLGNIPFKGAMIVLAIMLPSTFLSSLFVTWLGGLPGYEKQVEWGINLLVAA 113

Query: 127 NKAFAIFCLL--MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
              F+++  +  M  + + +       +     V  I   V    +G  G    +   +L
Sbjct: 114 AIIFSLYLFVQRMFFVSIIKQEAAKGDQLKSMAVPAILAGVVLGATGVGGGV--VVLPML 171

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           + +   +I +A  TS  V+ +++  + L     G+    L             LI+   +
Sbjct: 172 LRYMQLNIKQAIGTSIFVTTVLSGSSALAYAQDGYTDLKL------------ALILCAGA 219

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +++ PLA  L   + ++       +++  ++ + 
Sbjct: 220 LIVMPLAKYLLVRLSERTFQYITLLLIICSAVMM 253


>gi|125624256|ref|YP_001032739.1| hypothetical protein llmg_1448 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124493064|emb|CAL98028.1| putative membrane protein [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071037|gb|ADJ60437.1| hypothetical protein LLNZ_07465 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 917

 Score = 43.1 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 66/193 (34%), Gaps = 37/193 (19%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKA---FQLMGIDDSICMHVAMG 72
           ++     + +++  + +   + GL G     +M PV         L  +     +  A  
Sbjct: 21  QETAAKLLGILLQFASIYALIVGLVG----WLMPPVQKFISGFLYLFALPTDFSIFNA-- 74

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK--------- 123
                I    + S + HRR   + ++++      + +  +    + S+            
Sbjct: 75  -----IVLFILASSIRHRRRLALWIEVIYFQFAFVILGII---FLASYFSGLVSKETLEA 126

Query: 124 ---SFLNKAFAIFCLLMG----ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
              S L+ +F I  +L+     I+M+     +  +     + K +     GF+S  +G  
Sbjct: 127 ANFSILSLSFVILGVLVSLGTVIVMILSRNAFPTKIVNGTWWKALIIATGGFVSSIIG-- 184

Query: 177 GGIFTNLLMLFYG 189
                   + ++G
Sbjct: 185 --RVVVSYLTYHG 195


>gi|295394711|ref|ZP_06804927.1| integral membrane protein [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972444|gb|EFG48303.1| integral membrane protein [Brevibacterium mcbrellneri ATCC 49030]
          Length = 257

 Score = 43.1 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 90/263 (34%), Gaps = 30/263 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC-MHVAMGTSLGVIAPTS 82
            LI +A   +GT++ + G G  L+  P L       G+      M  A+G     + P +
Sbjct: 9   ALIFLAGLAAGTINAVVGSGT-LITFPALV----AFGVPPQAATMSNALG-----LIPGN 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S   +R     +   LK WI      ++V + ++  +          +  ++  ++++
Sbjct: 59  IASSFGYREDLRGSGDRLKRWIPASMAGSLVGATLLVVLPAKSFELIVPVLIVIALVMVV 118

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT--------NLLMLFYGASIYK 194
            + RL    K  D        +    +     + GG F          LL +     + K
Sbjct: 119 VQPRLQKYLKARDATALTNSTVAVYCILFFTAIYGGYFAAAQGIILIGLLGIVLDEPLQK 178

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
                  +   +   +       G+            ++  AV++I   S++   +  ++
Sbjct: 179 INGYKNVLVLFVNIVSAAAYTVIGFNK----------ISWMAVVLIAAGSLIGGYVGARV 228

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +    L     +I+   +FV
Sbjct: 229 GRKLNPTALRAV-IVILGIVAFV 250


>gi|262038846|ref|ZP_06012194.1| conserved hypothetical protein [Leptotrichia goodfellowii F0264]
 gi|261747134|gb|EEY34625.1| conserved hypothetical protein [Leptotrichia goodfellowii F0264]
          Length = 260

 Score = 43.1 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 74/195 (37%), Gaps = 14/195 (7%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L+ TL  + G+GGG+++ P     F  +G  +     +   +S+ V   + V    + R+
Sbjct: 12  LATTLGAISGLGGGVIIKP----LFDAVGFHNMST--IGFYSSVAVFTMSIVSIIKQLRK 65

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSF----LNKAFAIFCLLMGILML---KR 144
             +  +K +    F   +  ++   + + V +++    +    A+   +  I +L     
Sbjct: 66  GFSFEIKTVFWISFGSLVGGIIGENVFNEVTRAYENSTVKIIQAVCLGITLIGILIYTLN 125

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATATSAGVS 203
                     +    +  G   G +S  LG+GGG     +LML +   + +AT  S    
Sbjct: 126 KNKMKSYCLKNILYIFASGFFLGSISVFLGIGGGPLNIAVLMLLFSYEMKEATVYSIATI 185

Query: 204 ALIAFPALLVRIYSG 218
                  L   +  G
Sbjct: 186 FFAQISKLGSVLVGG 200



 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 10/109 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  I  + F  G++S   G+GGG + + VL   F       S  M  A   S+  I    
Sbjct: 137 ILYIFASGFFLGSISVFLGIGGGPLNIAVLMLLF-------SYEMKEATVYSIATIFFAQ 189

Query: 83  VM---SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +    S +   +    ++ +L    F   I   + +L+   ++ S + K
Sbjct: 190 ISKLGSVLVGGKLMNYDLSLLPFICFAAVIGGFMGTLINQKLNSSKIEK 238


>gi|238795064|ref|ZP_04638657.1| hypothetical protein yinte0001_4260 [Yersinia intermedia ATCC
           29909]
 gi|238725612|gb|EEQ17173.1| hypothetical protein yinte0001_4260 [Yersinia intermedia ATCC
           29909]
          Length = 233

 Score = 43.1 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 58/147 (39%), Gaps = 14/147 (9%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
            ++  + G+ G G  L+  P+L+    +  I   + +         V    ++ +   H 
Sbjct: 2   VIAYIIFGITGFGSALIASPILALFIPVAKIVPLLAI---------VDMFAAITNVARHS 52

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           RH   ++  LK  + ++ I +++ + ++       L  A  IF +   I  L R +   +
Sbjct: 53  RHA--DLAELKRLVPLMIIGSLIGATLLLRTRPDILLLALGIFVIFYAIYALSRRKPQGQ 110

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGG 177
            K         +G++ G  S   G GG
Sbjct: 111 FK---PVAAIPFGLIGGVFSALFGSGG 134


>gi|284991872|ref|YP_003410426.1| hypothetical protein Gobs_3457 [Geodermatophilus obscurus DSM
           43160]
 gi|284065117|gb|ADB76055.1| protein of unknown function DUF81 [Geodermatophilus obscurus DSM
           43160]
          Length = 251

 Score = 43.1 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 47/121 (38%), Gaps = 8/121 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + VA FL+    G FG   G+++V VL      + + +++   ++  T+   +    +
Sbjct: 138 VWLYVALFLATVYGGYFGGALGVILVGVLGVGLHRLKLANALKSALSAVTATVTLVVFGL 197

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                    G ++ +++        +   + + + + +  + L      F + + I +  
Sbjct: 198 --------FGPVDWQVVAVAAPASLLGGFLGARIATRIPTTPLRVFIVGFGVAVSIYLFT 249

Query: 144 R 144
           R
Sbjct: 250 R 250


>gi|300934604|ref|ZP_07149860.1| hypothetical protein CresD4_11073 [Corynebacterium resistens DSM
           45100]
          Length = 266

 Score = 43.1 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 84/248 (33%), Gaps = 36/248 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  ++V S ++G +  + G GGGL++VP++         +       A+GT+       +
Sbjct: 6   ITALLVGSLIAGWVDAVVG-GGGLILVPLVMIL------NPGFSNAQALGTNKVAAMFGT 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S     R        LK    +  I + V +L+ S VDK  +     +  + +G+ +L
Sbjct: 59  ASSAFTLARRIPSAKSALKY-SPLALIGSGVGALIASSVDKQIMRPIIIVLLIAVGVFVL 117

Query: 143 KRDRLYCERKFPDNY---------------VKYIWGMVTGFLSGALGVGGGIFTNL-LML 186
            R           +                         G   GA G G G+F  +    
Sbjct: 118 LRPSFGQASPAARSAQTASNNAGTTWQRLIGAMALVAGIGVYDGAFGPGTGLFLIMGFTT 177

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
                   + A +  ++      AL+V  + G        W LG       L +   +++
Sbjct: 178 LLNQDFLTSAAWAKILNVCTNAGALVVFTWQG-----EVLWMLG-------LALAITNVI 225

Query: 247 ITPLATKL 254
              +  ++
Sbjct: 226 GAQIGARM 233


>gi|289548884|ref|YP_003473872.1| hypothetical protein Thal_1113 [Thermocrinis albus DSM 14484]
 gi|289182501|gb|ADC89745.1| protein of unknown function DUF81 [Thermocrinis albus DSM 14484]
          Length = 249

 Score = 43.1 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 87/244 (35%), Gaps = 27/244 (11%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           L GVG G +  P+L     L+G+D +     A+G++L         + + H  +  ++ K
Sbjct: 17  LTGVGAGTLTAPLLI----LLGLDPAK----AVGSALAFSTVVKFPAVLAHAVYKNLDYK 68

Query: 99  ILKDWIFVLPITTVVTSLMI------SHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
            L   +      T++ SL++      S + K  L          + + +L   +      
Sbjct: 69  TLLLMLVGGVPGTLLGSLLLTLFHDPSRLKKILLLVIGITVIFSILLNLLMIWKGKRLDL 128

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPAL 211
               Y+  +   + G   G    G G    +L+L++   S  +A           +F   
Sbjct: 129 TRYRYLLPVACFLIGLEVGFTSAGAGALGMVLLLYFTNLSPARAVGVDIAFGLACSFVG- 187

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
                      G   +  G  ++G  L +    +    L T L+  +  K L +  S+++
Sbjct: 188 -----------GTSHFLQGHTDLGVFLPMSLGGLAGVFLGTHLARTVNPKPLRVIISLLL 236

Query: 272 FTTS 275
              +
Sbjct: 237 LIVA 240



 Score = 38.5 bits (89), Expect = 0.97,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 51/144 (35%), Gaps = 7/144 (4%)

Query: 1   MYDLLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMG 60
           ++ +L N  ++    +  +  Y  L+ VA FL G   G    G G +    +        
Sbjct: 110 IFSILLNLLMIWKGKRLDLTRYRYLLPVACFLIGLEVGFTSAGAGAL---GMVLLLYFTN 166

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
           +  +  + V +   L      S +    H   G  ++ +             + + +   
Sbjct: 167 LSPARAVGVDIAFGLAC----SFVGGTSHFLQGHTDLGVFLPMSLGGLAGVFLGTHLART 222

Query: 121 VDKSFLNKAFAIFCLLMGILMLKR 144
           V+   L    ++  L++ + +++R
Sbjct: 223 VNPKPLRVIISLLLLIVAVNLIQR 246


>gi|157737208|ref|YP_001489891.1| hypothetical protein Abu_0962 [Arcobacter butzleri RM4018]
 gi|157699062|gb|ABV67222.1| conserved hypothetical protein (DUF81 domain protein) [Arcobacter
           butzleri RM4018]
          Length = 199

 Score = 43.1 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 48/143 (33%), Gaps = 2/143 (1%)

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +  +S+   + + +     ++          I  +V+   +  V   +L   F    L  
Sbjct: 3   MVFSSIYGSIINAKKTKGLLRDGTILGVGASIGGMVSGYFLPAVPDIYLQYLFIASLLYT 62

Query: 138 GILMLK-RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKA 195
              + K       E+      V  + GM  G ++ ++G+GG +    +++ F    +  A
Sbjct: 63  VYTIFKAPASQTIEQDDKSFLVLLLIGMFVGVMAMSIGIGGSLLLLPILVGFLKYDLKVA 122

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
           TA         +    +     G
Sbjct: 123 TALGLFFVIFSSIGGFISTSIFG 145


>gi|330902633|gb|EGH33648.1| hypothetical protein PSYJA_33945 [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 123

 Score = 43.1 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 15/115 (13%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G V G +    G GGGI    L++F             G+   I   A +  +  G 
Sbjct: 9   VGLGTVIGMVLALTGAGGGILAVPLLVF-------------GLGLSIVEAAPVGLLAVGL 55

Query: 220 GLNGLPPWSL--GFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
                    L  G V   A   I  I +L+ PL   L++ +    L + FS+++ 
Sbjct: 56  AAGIGAVLGLRQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLL 110



 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 48/124 (38%), Gaps = 7/124 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           ++  L +    + G +  L G GGG++ VP+L     L  ++ +    +A+G + G+ A 
Sbjct: 3   EHQLLGVGLGTVIGMVLALTGAGGGILAVPLLVFGLGLSIVEAAPVGLLAVGLAAGIGAV 62

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
             +       R G +  +       +  +   +   +   +  + L   F++  L     
Sbjct: 63  LGL-------RQGIVRYRAAGYIASIGVLMAPLGLWLAHRLPNTPLALVFSVVLLYACGR 115

Query: 141 MLKR 144
           M  R
Sbjct: 116 MFIR 119


>gi|239905723|ref|YP_002952462.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
 gi|239795587|dbj|BAH74576.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
          Length = 350

 Score = 43.1 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 99/290 (34%), Gaps = 56/290 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           IC + +  F+ G +SG  G GG  V+ P +            +   VA+ +++    P +
Sbjct: 18  ICFLFIVGFIGGLVSGFIGSGGAFVLTPGMMSL--------GVPGTVAVASNMCHKFPKA 69

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF----------------- 125
           ++  ++  ++G +++K+         I   +   + ++V   +                 
Sbjct: 70  LVGSIKRYKYGQVDIKLGLYLAAFAGIGVQIGIKIQNYVLNLWGPAGSDLYVSVSFVAVL 129

Query: 126 -----------LNKAFAIFCLLMGILMLKRDRLYCERKFP--------DNYVKYIWGMVT 166
                      L  A +        L L+  ++                 +     G+ T
Sbjct: 130 VVVGGIVMRDALASAKSCGAEQTCFLALRLQKIELWPMMTFKKANLRISLWFLLPVGLAT 189

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G L+  + VGG +    ++   GAS   A+AT   ++ ++     +     G        
Sbjct: 190 GLLAATIAVGGFVGVPGMIYILGASSLVASATELVIAFVMGLAGSVNWAMQGM------- 242

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                V+I   LIIL  S+L   L    +  + +  + I    IM   + 
Sbjct: 243 -----VDIRLTLIILAGSLLGVQLGAIGTTFVKEHMIKIVMGTIMLIVAL 287


>gi|226225947|ref|YP_002760053.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
 gi|226089138|dbj|BAH37583.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
          Length = 118

 Score = 43.1 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 9/125 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA-- 79
            I L++     +G LSG+FG+GGG+V+VP L            +    A GTSL  +   
Sbjct: 1   MILLLVAIGLGAGILSGVFGIGGGIVIVPALIYL-------AKMPPQQAAGTSLAALVLP 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             + +    + R G + +K        +     + +L+ +H+D + L KAFA+  +LM +
Sbjct: 54  IGAAIGAATYYRAGHLQIKDALYIALGMAAGAYLGALLSTHLDANILRKAFAVLLVLMAV 113

Query: 140 LMLKR 144
            +   
Sbjct: 114 KLWLG 118


>gi|300087999|ref|YP_003758521.1| hypothetical protein Dehly_0898 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527732|gb|ADJ26200.1| protein of unknown function DUF81 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 241

 Score = 43.1 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 89/246 (36%), Gaps = 24/246 (9%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           + T++ + G GG ++M+PVL  AF +      + +   MG    VI              
Sbjct: 16  ASTIAAVAGFGGAIIMLPVLVLAFGVQDAIPILTISQLMGNLWRVIL-----------NR 64

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
             +N  I++ +      T V+  ++ +      L +   IF LL+   ++ R   + + +
Sbjct: 65  TVLNWPIVRRFALGAIPTAVIGGIIFAVAPAGALTRVLGIFLLLI---IVYRHTAWGKNQ 121

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                     G  +G +S  +GV G        L YG        T A  + ++      
Sbjct: 122 RMSLAGFLPLGAASGLMSATMGVVG-PVAAPFFLAYGLVKGAYIGTEAMTTVVMHI--TK 178

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           + +Y G+ L  L    +G       L I  +  L T L   +   I +         ++ 
Sbjct: 179 LGVYGGYNLLDLNTILIG-------LAIGVVMFLGTYLGKHILDRIPEGIFPYIIEGVLL 231

Query: 273 TTSFVF 278
            +  +F
Sbjct: 232 FSGIMF 237


>gi|254172269|ref|ZP_04878945.1| conserved domain protein, putative [Thermococcus sp. AM4]
 gi|214034165|gb|EEB74991.1| conserved domain protein, putative [Thermococcus sp. AM4]
          Length = 207

 Score = 43.1 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 78/206 (37%), Gaps = 13/206 (6%)

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           T L +   +   + +++ RHG ++ +     + V  +   V +     + K ++   F  
Sbjct: 6   TGLFINTLSMFSATLKNIRHGKLDHRFGLPILVVATLMAPVGAYSGKFIPKVYVLWVFVA 65

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASI 192
           F +  G +M+       E K        + G + GFL G LGVGGG   +  ++  G   
Sbjct: 66  FLIYSGTMMIFFRPKEREGKGNHIVEGSLIGGIAGFLGGLLGVGGGGIISPALILLGYEP 125

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            K  +T+A +    +    L              W LG ++   +L +   +I    L T
Sbjct: 126 KKVASTTALIVFFSSLSGFLTY------------WKLGTLDWELLLWVSLPAIAGGWLGT 173

Query: 253 KLSY-MIGKKYLTIGFSMIMFTTSFV 277
            L +  +    +     +IM+  +  
Sbjct: 174 HLMHFKMSSAQVKKVIGVIMYVIALK 199


>gi|311111604|ref|ZP_07713001.1| transport protein [Lactobacillus gasseri MV-22]
 gi|311066758|gb|EFQ47098.1| transport protein [Lactobacillus gasseri MV-22]
          Length = 228

 Score = 43.1 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 26/233 (11%), Positives = 75/233 (32%), Gaps = 22/233 (9%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +GI        A  T+   +  T V S     +    + K +  +     I + 
Sbjct: 7   YPVLLSVGIPPVY----ANTTNDAALIWTGVGSTASSLKELKGHWKQVSFYSIFTIIGSA 62

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN-----YVKYIWGMVTG 167
           +  +++         K         G+++L    ++   +          +  +  ++ G
Sbjct: 63  LGCMLLIQFPGKIFEKIVPFCIAFSGLMILFSGEIHLGNESDHPNRLVQALSLLCLLIAG 122

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKAT-ATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
             +G  G   G+   +++       +    A    + AL    AL++ +++         
Sbjct: 123 AYAGYFGAASGVLMLVILNAISDDDFLTVNAMKNIIGALSNLVALIIYMFTEK------- 175

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                +   A + +   +++ +    ++   I  K + +  +++    +  FA
Sbjct: 176 -----IYWNAAIPLAIGALIGSYFGPRIMRHIPVKIIRLVIAVLALIQAAYFA 223


>gi|167570999|ref|ZP_02363873.1| hypothetical protein BoklC_14225 [Burkholderia oklahomensis C6786]
          Length = 264

 Score = 43.1 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 85/277 (30%), Gaps = 37/277 (13%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++    L  ++    G L GL GVGGG +M P+L   F       ++    A+GT L   
Sbjct: 3   LLHIDPLYSLSGLFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYA 55

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI------SHVDKSFLNKAFAI 132
           A T       H   GT+  +I             +T   +      S      +      
Sbjct: 56  ALTKATGTFVHGLKGTVEWRITGRLAAGSVPAAAITLWFLHAHGMHSQETSRMIQFVLGA 115

Query: 133 FCLLMGILMLKRDRLY----------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
             LL  + +L R +L                       + G V G L     VG G    
Sbjct: 116 ALLLTSLSLLFRPQLAAFAARRTRALPPSPTRTLAATVLTGAVLGVLVSLTSVGAGAIGV 175

Query: 183 LLMLFY--GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
            ++L      S  +   +    +  +   A +              W LG V+   ++ +
Sbjct: 176 TVLLLLYPTLSTTRIVGSDIAHAVPLTLVAGVG------------HWMLGSVDWSILVSL 223

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L  S+      + LS    +  L    + ++      
Sbjct: 224 LIGSVPGIVAGSHLSARAPEGLLRRILATMLVAVGAK 260



 Score = 42.8 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 47/118 (39%), Gaps = 6/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  L  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 153 VLTGAVLGVLVSLTSVGAGAIGVTVLLLLY------PTLSTTRIVGSDIAHAVPLTLVAG 206

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + H   G+++  IL   +       V  S + +   +  L +  A   + +G  ++  
Sbjct: 207 VGHWMLGSVDWSILVSLLIGSVPGIVAGSHLSARAPEGLLRRILATMLVAVGAKLVLS 264


>gi|227894558|ref|ZP_04012363.1| integral membrane protein [Lactobacillus ultunensis DSM 16047]
 gi|227863717|gb|EEJ71138.1| integral membrane protein [Lactobacillus ultunensis DSM 16047]
          Length = 271

 Score = 43.1 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 90/268 (33%), Gaps = 24/268 (8%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
                +  I  +++     G LS +  +   L   PVL       GI        A  T+
Sbjct: 17  DLKMTIWTIIFLLIGGVAGGLLSSIASM-ASLASYPVLLAV----GIPPVF----ANVTN 67

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
              +  TS+ S +   +    + K +  +     + +++  +++         KA   F 
Sbjct: 68  DAALIWTSIGSTVSSTKELKGHWKQVWFYTIFTVVGSIIGCMLLLSFPSRVFEKAVPFFI 127

Query: 135 LLMGILMLKRDRLYCERKFPDNYVK----YIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
              G++++   + +               +I  ++ G  +G  G  GG+   +L+ +   
Sbjct: 128 AFSGVMIIVSGKHHVLNTEKQPTWLKVIYFIALLIMGAYTGYFGAAGGVIVLVLLTY--I 185

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           +  +    +A  + +  F  L+  +   +           ++     + +     +   +
Sbjct: 186 TNERFVVINAIKNVICGFANLVALVIFIFTS---------YIYWLQAIPLAIGMFIGGYI 236

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
              +   + +K + I  + + F  +  F
Sbjct: 237 GPAILRRVPEKPVRIFIAALAFIQAGYF 264


>gi|221201055|ref|ZP_03574095.1| putative membrane protein [Burkholderia multivorans CGD2M]
 gi|221206493|ref|ZP_03579506.1| putative membrane protein [Burkholderia multivorans CGD2]
 gi|221173802|gb|EEE06236.1| putative membrane protein [Burkholderia multivorans CGD2]
 gi|221178905|gb|EEE11312.1| putative membrane protein [Burkholderia multivorans CGD2M]
          Length = 262

 Score = 43.1 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 57/268 (21%), Positives = 92/268 (34%), Gaps = 31/268 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  ++    G L GL GVGGG +M P+L   F        +    A+GT L   A T  
Sbjct: 8   LLYSLSGLFVGILVGLTGVGGGSLMTPILVLLF-------GVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH------VDKSFLNKAFAIFCLLM 137
              + H   G+I+ +I             VT  ++             +     I  LL 
Sbjct: 61  TGTLVHGLKGSIDWRITGRLAAGSVPAAAVTLWVLHSHGVNAPGTARLIQLVLGIALLLT 120

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            + ++ R                    +   + G V G L     VG G     ++L   
Sbjct: 121 SVALIFRPQLAAFAARNPLAPSPARTLWSTVLTGAVLGVLVSMTSVGAGAIGVTVLLL-- 178

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +Y A AT+  V + IA    L        + G+  W LG V+   +L +L  S+    
Sbjct: 179 --LYPALATTRIVGSDIAHAVPLTL------VAGMGHWLLGSVDWSMLLSLLLGSLPGIV 230

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + + LS    ++ L    +  +      
Sbjct: 231 IGSLLSARAPERLLRNLLAATLVAVGVR 258



 Score = 38.5 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 49/117 (41%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  +  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 151 VLTGAVLGVLVSMTSVGAGAIGVTVLLLLY------PALATTRIVGSDIAHAVPLTLVAG 204

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M H   G+++  +L   +       V+ SL+ +   +  L    A   + +G+ ++ 
Sbjct: 205 MGHWLLGSVDWSMLLSLLLGSLPGIVIGSLLSARAPERLLRNLLAATLVAVGVRLVL 261


>gi|169628263|ref|YP_001701912.1| hypothetical protein MAB_1170 [Mycobacterium abscessus ATCC 19977]
 gi|169240230|emb|CAM61258.1| Conserved hypothetical protein [Mycobacterium abscessus]
          Length = 285

 Score = 43.1 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 7/120 (5%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I +  V  F+ G  S   G+GGGL+ VP +   F          +HVA GTSL V+ P
Sbjct: 145 SVIAIGAVVGFVVGAWSAALGLGGGLLTVPAMLVLF-------GSELHVAEGTSLMVMLP 197

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            ++++   H R GT +  I           TV+ +L+   ++  +L   F  + + + + 
Sbjct: 198 NALVAATTHLRQGTADAPIGFRLAAFALPGTVIGALLALALNARWLALVFGSYLVFIAVR 257


>gi|146340262|ref|YP_001205310.1| hypothetical protein BRADO3283 [Bradyrhizobium sp. ORS278]
 gi|146193068|emb|CAL77079.1| conserved hypothetical protein; putative membrane protein
           [Bradyrhizobium sp. ORS278]
          Length = 254

 Score = 43.1 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 76/213 (35%), Gaps = 17/213 (7%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            ++ +  +     ++    ++GTLSG+ G G  ++++PVL   +            +A+ 
Sbjct: 6   LVTAEDDILSFLFVLAVGLVAGTLSGIVGTGSSIMLMPVLVYEYG----PKEAVPIMAVA 61

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
             +      ++   +   R   ++ +    +         + +  +  +    ++ A  +
Sbjct: 62  AVMA-----NLSRILAWWR--EVDWRACAAYSVTGIPAAALGARTLLILPSRAVDIAIGL 114

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYV-KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
           F +     M+         +   N     + G V GFL+G + V  G  +  L LFYG S
Sbjct: 115 FLMA----MVPVRHWLARHEIKANLWHLALGGAVIGFLTGIV-VSTGPLSVPLFLFYGLS 169

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
                AT A  S  +     +     G     +
Sbjct: 170 KGAFLATEAASSLGLYVSKSITFQRFGALTPDI 202


>gi|10803599|ref|NP_045997.1| hypothetical protein VNG7052 [Halobacterium sp. NRC-1]
 gi|10803704|ref|NP_046102.1| hypothetical protein VNG7157 [Halobacterium sp. NRC-1]
 gi|16120035|ref|NP_395623.1| hypothetical protein VNG6071C [Halobacterium sp. NRC-1]
 gi|16120327|ref|NP_395915.1| hypothetical protein VNG6455C [Halobacterium sp. NRC-1]
 gi|169237216|ref|YP_001690422.1| hypothetical protein OE7081F [Halobacterium salinarum R1]
 gi|169237720|ref|YP_001690923.1| hypothetical protein OE6201F [Halobacterium salinarum R1]
 gi|2822330|gb|AAC82836.1| unknown [Halobacterium sp. NRC-1]
 gi|2822435|gb|AAC82941.1| unknown [Halobacterium sp. NRC-1]
 gi|10584129|gb|AAG20758.1| Vng6071c [Halobacterium sp. NRC-1]
 gi|10584473|gb|AAG21050.1| Vng6455c [Halobacterium sp. NRC-1]
 gi|167728282|emb|CAP15079.1| hypothetical protein OE7081F [Halobacterium salinarum R1]
 gi|167728497|emb|CAP15319.1| hypothetical protein OE6201F [Halobacterium salinarum R1]
          Length = 325

 Score = 43.1 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 91/289 (31%), Gaps = 49/289 (16%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +        L G L G FG+GG  ++ P L                VA+G+ L  + 
Sbjct: 3   LLLVSFFAGFGLLIGILFGFFGMGGSFLVTPALLVM--------GYPSRVAVGSGLAFVF 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFC 134
            TSV+  + HR HG ++ K+       + I       ++  +  +      ++ A+    
Sbjct: 55  GTSVIGALRHRDHGHVDYKLAVIMTVAMTIGIEAGKRVVDALHAAGNADLVISVAYVGLL 114

Query: 135 LLMGILMLKRDRLYCE----------RKFPDNYVKYIWGMVTGFLSGALGV--------- 175
             +GI  L+  R              +      +  + G V    S   G+         
Sbjct: 115 ATVGIFTLRDARASGTTASVDLSERVQALEIPPMVTLRGDVRVSASIIFGIGLVVGVLSG 174

Query: 176 -----GGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
                GG +    +M   G     A  T      +       V                G
Sbjct: 175 LLGVGGGFLLMPAMMYGLGVPAAIAIGTDILQITISGAFGAFVYARD------------G 222

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           FV I  V  +L  S L   +   +S ++ +  +   F+ ++   S   A
Sbjct: 223 FVAIPVVATLLAGSALGARIGAGVSNIVDEDDIKGYFATMLLAGSVAVA 271


>gi|296161161|ref|ZP_06843970.1| protein of unknown function DUF81 [Burkholderia sp. Ch1-1]
 gi|295888502|gb|EFG68311.1| protein of unknown function DUF81 [Burkholderia sp. Ch1-1]
          Length = 188

 Score = 43.1 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 32/79 (40%)

Query: 66  CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
            M   + TSL +I   S    +     G +N  I   +        +   L++ H+    
Sbjct: 105 PMQAIVATSLTIITLISASVVVSTAVEGRMNWHIGVPFAAGALSGMLGGRLIVRHLSGPR 164

Query: 126 LNKAFAIFCLLMGILMLKR 144
           L + FA+F  ++ + M+ +
Sbjct: 165 LQQGFAVFAGVIAVGMVAK 183


>gi|86359119|ref|YP_471011.1| putative transporter, permease protein [Rhizobium etli CFN 42]
 gi|86283221|gb|ABC92284.1| putative transporter, permease protein [Rhizobium etli CFN 42]
          Length = 254

 Score = 43.1 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +    + A  L G   G  G    L+ +P L+     +          A    L ++ 
Sbjct: 5   LSFYYAAVPAVLLVGLAKGGMGDALSLIGLPFLALVVSPL---------EAAAILLPILV 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              ++S +  RRHG  +   LK  +        +     + V  + L        +L  +
Sbjct: 56  FMDMISLVIWRRHG--DWATLKIMLPGAIFGIALGWATSALVPGNVLRVVIGAVTILFCL 113

Query: 140 -LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSG---ALGVGGGIFTNLLMLFYGASIYKA 195
                       +  P    + +   + G  SG    +   GG    +  L       + 
Sbjct: 114 RYFWNNFGPGAGKSIPPRGQRPVAARLWGTFSGYGSFVAHAGGAPFQIYALPLKLEPREY 173

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           T TS    A++    L+     G                   L      +   PL   L+
Sbjct: 174 TGTSVRFFAILNAIKLIPYFALGQLDTQN-------------LATSATLLPFAPL-ATLA 219

Query: 256 YMIGKKYLT-IGFSMIMFTTSFVFA 279
                + +    F   M+T + + A
Sbjct: 220 GAWCVRRMKPQIFYPFMYTMALIAA 244


>gi|29832205|ref|NP_826839.1| hypothetical protein SAV_5662 [Streptomyces avermitilis MA-4680]
 gi|29609323|dbj|BAC73374.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 260

 Score = 43.1 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 55/164 (33%), Gaps = 7/164 (4%)

Query: 62  DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV 121
                   A+GT+  V    +  + + + R   +++             +   + + + +
Sbjct: 42  PGGTPAAYALGTNKAVAIVGTAGAAVTYARKTRVDVGTAVRIGLAALAGSTAGAFVAAGL 101

Query: 122 DKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK------YIWGMVTGFLSGALGV 175
             + L     +  L +G  ++ R             V+       + G+  GF  G +G 
Sbjct: 102 STAVLKPVVMVVLLGVGTFVILRPAFGMAPSTEPVSVRRMLAAIGLAGLGIGFYDGLIGP 161

Query: 176 GGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           G G F  L +       +  A+AT+  V+      AL    + G
Sbjct: 162 GTGTFLVLALTALLHLDLVTASATAKIVNCCTNAGALATFAWKG 205


>gi|326433498|gb|EGD79068.1| hypothetical protein PTSG_02036 [Salpingoeca sp. ATCC 50818]
          Length = 607

 Score = 43.1 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 17/143 (11%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMH--VAMG 72
             D +   +   +  + ++G L+G  G+GGG+V+ P+L              MH  V+  
Sbjct: 459 DIDYIGGGVAKYLFFALVAGMLAGFLGIGGGMVLAPLLL----------QFNMHPLVSSA 508

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-----DKSFLN 127
           T+  +   TS  SF +      +          +    +VV  +++        + S + 
Sbjct: 509 TTAYMTLFTSAGSFTQFVILNRVPYDYGIALFLLAAAASVVGQILLHSYVRRTGNSSVIA 568

Query: 128 KAFAIFCLLMGILMLKRDRLYCE 150
                   L  I++L    L  +
Sbjct: 569 FILGFVIGLAAIMLLVSGSLQLK 591



 Score = 38.5 bits (89), Expect = 1.00,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 29/57 (50%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
             + +V G L+G LG+GGG+    L+L +      ++AT+A ++   +  +    + 
Sbjct: 471 LFFALVAGMLAGFLGIGGGMVLAPLLLQFNMHPLVSSATTAYMTLFTSAGSFTQFVI 527


>gi|238786234|ref|ZP_04630180.1| hypothetical protein yberc0001_39220 [Yersinia bercovieri ATCC
           43970]
 gi|238712849|gb|EEQ04915.1| hypothetical protein yberc0001_39220 [Yersinia bercovieri ATCC
           43970]
          Length = 233

 Score = 43.1 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 61/147 (41%), Gaps = 14/147 (9%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
            ++ T+ G+ G G  L+  PVL+    +  I   + +         V    ++ +   H 
Sbjct: 2   VVAYTIFGITGFGSALIASPVLALFIPVAKIVPLLAI---------VDMFAAMTNVARHS 52

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           RH   ++  LK  + ++ I +++ + ++       L  A  +F +L  I  L R +   +
Sbjct: 53  RHA--DLAELKRLVPLMIIGSLIGATILLRTRPDILLLALGLFVILYAIYSLSRRKPQGQ 110

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGG 177
               ++     +G++ G  S   G GG
Sbjct: 111 F---NSIAAIPFGLIGGIFSALFGSGG 134


>gi|319942345|ref|ZP_08016659.1| hypothetical protein HMPREF9464_01878 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804033|gb|EFW00941.1| hypothetical protein HMPREF9464_01878 [Sutterella wadsworthensis
           3_1_45B]
          Length = 254

 Score = 43.1 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 74/207 (35%), Gaps = 17/207 (8%)

Query: 20  VDYICLIIV--ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
           +D I  +IV    FL G +  + G GGGL+ +P    A         +  H+A+GT+   
Sbjct: 3   LDLITFLIVCPLVFLGGLVDAVAG-GGGLIALPAYLIA--------GVPAHLALGTNKLS 53

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
            A  +V+S     R G +N++     I    + +   + +   V +            + 
Sbjct: 54  SAMGTVVSAFRLWRAGFLNIRKSLPAIVCSLLGSAAGAHLALLVPERVFELILVGLLPIA 113

Query: 138 GILMLKRDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGAS 191
              +L +  +    +          +  I  ++ G   G  G G G F  L   L+    
Sbjct: 114 AFFVLSKRAVMSNDEGIITARKQLVILCIASLICGAYDGFYGPGAGTFMLLAFTLWAKMG 173

Query: 192 IYKATATSAGVSALIAFPALLVRIYSG 218
           +  A+ T   V+      A      SG
Sbjct: 174 VRSASGTMKAVNLASNIAAFATFALSG 200


>gi|308159430|gb|EFO61961.1| Hypothetical protein GLP15_502 [Giardia lamblia P15]
          Length = 748

 Score = 43.1 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 40/113 (35%), Gaps = 9/113 (7%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT----INMKILKDWIF 105
           PV++        D  +   VA   +  +  P  ++    H+++      +   +L  +  
Sbjct: 37  PVIALTLIFFFADTHVATTVANACACALTLPAFILDVFRHKKYDALSPLLQWDLLILFQP 96

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLM-----GILMLKRDRLYCERKF 153
              +  +V S+  +      L+    +F +L+       L L +  +  E+  
Sbjct: 97  FSLLGALVGSICNAIFPSWVLSIFVCLFLILVVGKRISYLFLIKSDIEEEKAL 149


>gi|307823915|ref|ZP_07654143.1| protein of unknown function DUF81 [Methylobacter tundripaludum
           SV96]
 gi|307735209|gb|EFO06058.1| protein of unknown function DUF81 [Methylobacter tundripaludum
           SV96]
          Length = 261

 Score = 43.1 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 12/126 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +   ++A F  G ++ L GV GG +++P L   F          + +A   SL V  PT 
Sbjct: 141 VAAGVLAGFGIGVVASLLGVAGGELLIPTLVLLF-------GTDIKLAGSLSLAVSLPTI 193

Query: 83  VMSFMEHRRHGTI-----NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +  F  +    +      N                +   ++  +    L  + A+   + 
Sbjct: 194 LTGFARYSTDRSFAVLGRNRDFALAMAAGSLFGAFLGGQLLGMIPADVLLPSLALILAIS 253

Query: 138 GILMLK 143
            I + +
Sbjct: 254 AIKVWR 259



 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 59/190 (31%), Gaps = 13/190 (6%)

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
             +  I+ + +    +     +     +      K  A+    + +L++           
Sbjct: 74  AAHWSIILNLLAGSLLGAWFGAGWAIKLKTESFYKVIAVLLAAIALLLVFGHNPANASLP 133

Query: 154 PDNYVK-----YIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIA 207
           P +         + G   G ++  LGV GG +    L+L +G  I  A + S  VS    
Sbjct: 134 PLSGAPQVAAGVLAGFGIGVVASLLGVAGGELLIPTLVLLFGTDIKLAGSLSLAVSLPTI 193

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
                                LG  N    L +   S+    L  +L  MI    L    
Sbjct: 194 LTGFARY------STDRSFAVLGR-NRDFALAMAAGSLFGAFLGGQLLGMIPADVLLPSL 246

Query: 268 SMIMFTTSFV 277
           ++I+  ++  
Sbjct: 247 ALILAISAIK 256


>gi|319441684|ref|ZP_07990840.1| hypothetical protein CvarD4_07947 [Corynebacterium variabile DSM
           44702]
          Length = 251

 Score = 43.1 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 49/122 (40%), Gaps = 7/122 (5%)

Query: 59  MGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI----NMKILKDWIFVLPITTVVT 114
           +G+     + VA+G + GV     +           +    +    +  I  L + +V  
Sbjct: 26  LGLVAGPVLSVALGPAAGVTVVNGLSVVNAANNAWAVRARTDWHRFRFLIGGLVVGSVPA 85

Query: 115 SLMISHVDKSFLNKAFAIFCL-LMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGAL 173
           + +++ +D  +L     +  +  +G+ ML  ++L    +        + G+  GF+S  +
Sbjct: 86  AFVVTAIDGPWLLVTVGLLVMAALGVSMLNTEKLRVSEE--SRTAMIVTGVAGGFMSTLV 143

Query: 174 GV 175
           G+
Sbjct: 144 GI 145


>gi|291279095|ref|YP_003495930.1| hypothetical protein DEFDS_0694 [Deferribacter desulfuricans SSM1]
 gi|290753797|dbj|BAI80174.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 245

 Score = 43.1 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 24/251 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + LI + +F+   L  L GVG  +V+VP++            I ++ A  T L +   + 
Sbjct: 1   MLLITILAFIFSFLFALGGVGSAIVLVPIMYWI--------GIPLNEAKPTGLFINTISL 52

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + +   + ++  +++KI    I    I   + +   + + K  +   F IF +    +ML
Sbjct: 53  IGATYSNIKNKRLDVKIGIPIIVASMILAPIGAYFSTIIPKEIVLIIFIIFLIFSSFMML 112

Query: 143 KRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
                  E   R+        + G + GF+SG LG+GGG   + LM+  G +  K    +
Sbjct: 113 FFRASKYEDNYREDSPYIALALIGSLAGFISGLLGIGGGGLISPLMIMLGFNPKKVATVT 172

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY-MI 258
           A V    +       +            ++G +NI  ++ +   + L   L T   +  +
Sbjct: 173 AFVVPFSSITGFFAYL------------AMGHINIKLLIFVGLAAYLGGYLGTHFMHLKM 220

Query: 259 GKKYLTIGFSM 269
               +     +
Sbjct: 221 KPATVKKFLGV 231


>gi|302551249|ref|ZP_07303591.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302468867|gb|EFL31960.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 260

 Score = 43.1 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 53/156 (33%), Gaps = 7/156 (4%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+GT+  V    +  + + + R   ++++            +   + + + +    L   
Sbjct: 50  ALGTNKAVAIVGTTGAAVTYARKAPVDVRTAVRIGLAALAGSSAGAFLAAGMSTEVLKPV 109

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYI------WGMVTGFLSGALGVGGGIFTNL 183
             +  L +   ++ R              + I       G+  GF  G +G G G F  L
Sbjct: 110 IMVVLLGVAAFVILRPAFGTAPATGPATRRQILAAIGLAGLGIGFYDGLIGPGTGTFLVL 169

Query: 184 LMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
            +       +  A+AT+  V+      AL    + G
Sbjct: 170 ALTAVLHLDLVTASATAKIVNCCTNAGALATFAWQG 205


>gi|225851163|ref|YP_002731397.1| membrane protein [Persephonella marina EX-H1]
 gi|225644994|gb|ACO03180.1| membrane protein [Persephonella marina EX-H1]
          Length = 351

 Score = 43.1 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 57/283 (20%), Positives = 98/283 (34%), Gaps = 47/283 (16%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  +I    + G LSGL G+GGG+++ P L K     GI   +     +GTS+  +   +
Sbjct: 14  IFFLIALGIVVGFLSGLLGIGGGIILNPALIKI----GIPPIVT----VGTSVSQMVGAT 65

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLM 137
           V  F+ H R   I+MK+    +    +   V   +   ++      +F+   +A +    
Sbjct: 66  VSGFIAHLRLKNIDMKMGYILVGSGFLGGSVGVFLAKVLEDAGHFRTFVLSFYAFYLGFT 125

Query: 138 GILML----------------------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGV 175
           GI +                          ++  +       V    G+V GFL+  +GV
Sbjct: 126 GITLFLDVFRKNRDEKRSSKIKDFIDSLPLKVEFQFTTVSLLVPVGIGVVAGFLAAVMGV 185

Query: 176 GGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNI 234
           GGG      LM   G  + KA   S      +             G           V+I
Sbjct: 186 GGGFVVIPALMYLAGFPVQKAVGMSLFQMIFVTAFLTFFHGVVNHG-----------VDI 234

Query: 235 GAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              LI++  S             I K    +  + ++ + S +
Sbjct: 235 VLALILMLGSSFGAVFGAAAGQRISKNITKLIMAFLVTSVSIM 277


>gi|269955086|ref|YP_003324875.1| hypothetical protein Xcel_0278 [Xylanimonas cellulosilytica DSM
           15894]
 gi|269303767|gb|ACZ29317.1| protein of unknown function DUF81 [Xylanimonas cellulosilytica DSM
           15894]
          Length = 258

 Score = 43.1 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 84/238 (35%), Gaps = 26/238 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L++VA F +G +  + G GGGL+ +P L            I    A+ T+       + 
Sbjct: 10  VLLVVAGFAAGWVDAVVG-GGGLIQLPALLLV-------PGIAPVQALATNKVGSIMGTS 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S + + R    +               V  +++ + +  +       +  + + +  L 
Sbjct: 62  TSSITYARRVQPDFTTAGPMAVAALAGAVGGAVLAARIPAAAFRPIILVVLVAVFVYTLL 121

Query: 144 RDRLYCERKF-----PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
           +  L    +             + G+V G   G LG G G F  + ++   G +   A+A
Sbjct: 122 KPSLGDRTRLRWEGNRHRVTAAMTGLVIGVYDGVLGPGTGTFLVIALVGVLGYAFLPASA 181

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            +  V+      AL+  +       G   W LG       L I   +++   L  +++
Sbjct: 182 LAKIVNFATNLGALIFFV-----PAGHVIWHLG-------LAIGAANLMGGYLGARMA 227


>gi|207724011|ref|YP_002254409.1| hypothetical protein RSMK01540 [Ralstonia solanacearum MolK2]
 gi|206589219|emb|CAQ36181.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
          Length = 273

 Score = 43.1 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 7/120 (5%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G +  L G GG +V VP+L     L     +    +A+G S G+ A   +      
Sbjct: 15  GSAVGLILALTGAGGAIVAVPLLIFGLHLSVAQAAPVALLAVGLSAGLGAALGL------ 68

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
            R G +  K          + + +       V  + L   FA+    + I M ++ R   
Sbjct: 69  -REGKVRYKAAALMALCGVLLSPLGVWAAQRVPNTPLTLLFAVVLAYVAIRMFRQARATT 127



 Score = 42.4 bits (99), Expect = 0.066,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 28/76 (36%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + M   + TSL VIA  S    +     G ++ +I   +        +       H+  
Sbjct: 190 DLPMQTIVATSLAVIALVSAGGVVASAIGGHVDWQIAVPFGAGALAGMLAGRGFARHLAG 249

Query: 124 SFLNKAFAIFCLLMGI 139
             L + FA F  ++ I
Sbjct: 250 PALQQGFAGFAAIVAI 265



 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 11/124 (8%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
                   G   G +    G GG I    L++F    ++ + A +A V+ L    +  + 
Sbjct: 7   GWLASAGLGSAVGLILALTGAGGAIVAVPLLIF---GLHLSVAQAAPVALLAVGLSAGLG 63

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
              G           G V   A  ++    +L++PL    +  +    LT+ F++++   
Sbjct: 64  AALGLRE--------GKVRYKAAALMALCGVLLSPLGVWAAQRVPNTPLTLLFAVVLAYV 115

Query: 275 SFVF 278
           +   
Sbjct: 116 AIRM 119


>gi|190893351|ref|YP_001979893.1| transmembrane permease [Rhizobium etli CIAT 652]
 gi|190698630|gb|ACE92715.1| putative transmembrane permease protein [Rhizobium etli CIAT 652]
          Length = 254

 Score = 43.1 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +    + A  L G   G  G    L+ +P L+           +    A    L ++ 
Sbjct: 5   LSFYYAAVPAVLLVGLAKGGMGDALSLIGLPFLALV---------VSPVEAAAILLPILV 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              ++S +  R+HG  +   LK  +    +   +     + V  + L        +L  +
Sbjct: 56  FMDMISLVVWRKHG--DWTTLKIMLPGAILGIGLGWATSALVPGNILRIVIGAVTILFCL 113

Query: 140 -LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSG---ALGVGGGIFTNLLMLFYGASIYKA 195
                       R  P    + I     G  SG    +   GG    +  L       + 
Sbjct: 114 RYFWNNFGPGAGRVIPPRGQRPIAAGFWGAFSGYGSFVAHAGGAPFQVYALPLKLQPREY 173

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           T TS    A++    L+     G                   L      +   PL   L+
Sbjct: 174 TGTSVRFFAILNAVKLIPYFALGQLDTQN-------------LATSATLLPFAPL-ATLA 219

Query: 256 YMIGKKYLT-IGFSMIMFTTSFVFA 279
                + +    F   M+  +F+ A
Sbjct: 220 GAWCVRRMKPEIFYPFMYAMAFIAA 244


>gi|51246365|ref|YP_066249.1| hypothetical protein DP2513 [Desulfotalea psychrophila LSv54]
 gi|50877402|emb|CAG37242.1| conserved hypothetical membrane protein [Desulfotalea psychrophila
           LSv54]
          Length = 250

 Score = 43.1 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 49/229 (21%), Positives = 89/229 (38%), Gaps = 12/229 (5%)

Query: 19  VVDYICLIIVASFLS-GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
           ++D  CLIIV    S   +  L G+G  L ++P L+           +    A    L V
Sbjct: 1   MMDVTCLIIVVVAFSLSFVFALGGIGSALALIPSLTWL--------GLPFAQARAIGLFV 52

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
              +   +   + R+  ++ ++    I    I   V +     ++  +L   F  F    
Sbjct: 53  NTVSMAGATYSNIRNRRLDFRLGIPIILPSIILAPVGAWTGHFIETRYLLMVFIAFLSFS 112

Query: 138 GILMLKRDRLYCERKFPDN---YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
           G++ML         ++ ++       + G+  GFLSG LGVGGG   + LM+  G +  K
Sbjct: 113 GLMMLLFKGSKYANQYREDRPITGPLLTGIAAGFLSGLLGVGGGGLISPLMILQGFNPKK 172

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
             A +A      +  A +     G    G+  ++     +G  L  + +
Sbjct: 173 VAAITAFAVPFSSLSAFITYALMGSVPWGILLYAGPAAWLGGYLGTMVM 221


>gi|329935312|ref|ZP_08285278.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
 gi|329305135|gb|EGG48994.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
          Length = 250

 Score = 43.1 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 8/95 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT-INMKILKDWIFVL 107
           VP L           +  M  A+GTSL VI+  S+ S          I+  ++  +    
Sbjct: 158 VPALVTVL-------AFEMQAAVGTSLLVISANSLASLATRSATTAGIDWALIGPFTGAA 210

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +       + + V  + L + FA+  L +   ML
Sbjct: 211 ILGAWDGKRLAAKVTGTLLQRTFAVVLLAVAAFML 245


>gi|183221990|ref|YP_001839986.1| hypothetical protein LEPBI_I2631 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189912057|ref|YP_001963612.1| hypothetical protein LBF_2550 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167776733|gb|ABZ95034.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167780412|gb|ABZ98710.1| Conserved hypothetical protein; putative membrane protein
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 121

 Score = 42.8 bits (100), Expect = 0.049,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 8/98 (8%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWIFVLP 108
           P L   F            +A GT+L  + P   +++   +   G  N+           
Sbjct: 31  PALVYFF-------DFNQKMAQGTTLAAMVPPIGIVAAYIYYTRGETNLFAAALISAGFI 83

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           + +V  +   S +D + L++ F IF +++G+ M+   +
Sbjct: 84  LGSVFGAGAASKIDTTVLSRFFGIFTVIVGLKMIFFPK 121


>gi|296536290|ref|ZP_06898404.1| integral membrane protein [Roseomonas cervicalis ATCC 49957]
 gi|296263379|gb|EFH09890.1| integral membrane protein [Roseomonas cervicalis ATCC 49957]
          Length = 253

 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 82/258 (31%), Gaps = 23/258 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  L + A  ++G   G F  GGG + VP ++                A   SL V+   
Sbjct: 9   FYALAVPAILVTGISKGGFASGGGNLSVPAMALLVPA---------PQAAAISLPVLCAM 59

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            +         G  +++ ++  +    +   + SL    +          +  L      
Sbjct: 60  DIAGLRAWW--GRWSLREMRAILPGGLLGIALGSLAFGLMSDRMTKLMVGVIALAFLARN 117

Query: 142 L--KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
           L   R         P+      W  V+GF S     GG       +  Y   +    A  
Sbjct: 118 LWQARHGKPPPPAAPNRLKGGFWSTVSGFTSTIAHAGG-----PPLAVYLYPLRLERAQL 172

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A  + +  F  ++  +        L   SLG  N+   L++LP++ +   L   L   I 
Sbjct: 173 AATTVV--FFGVVNYVKL-VPYAALGQLSLG--NLLTSLVLLPLAPVGVRLGVWLQGRIS 227

Query: 260 KKYLTIGFSMIMFTTSFV 277
            K       +++  T   
Sbjct: 228 DKVFYRVIHVLLAATGIK 245


>gi|282856493|ref|ZP_06265769.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
 gi|282585678|gb|EFB90970.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
          Length = 238

 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 11/150 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++       F  G + G+ G G G++ VP L +      +             L +I  T
Sbjct: 5   HLLAAAGVVFFGGAVQGVAGFGMGMISVPALLRFLPPAAVTP-----------LSLIVGT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            +  F        I + ++   +    +  +     +  V +     A  +F  L G L+
Sbjct: 54  FMNFFFFWNLRRNIRIGLILPILAGAALGVMPGIWALETVPEGPFKTAAGLFIALAGALL 113

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSG 171
               +   E++     V +  G+++G LS 
Sbjct: 114 WLGWKCPVEKRPLQLGVGFASGVLSGALSV 143


>gi|218296880|ref|ZP_03497575.1| protein of unknown function DUF81 [Thermus aquaticus Y51MC23]
 gi|218242760|gb|EED09295.1| protein of unknown function DUF81 [Thermus aquaticus Y51MC23]
          Length = 246

 Score = 42.8 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 82/246 (33%), Gaps = 28/246 (11%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +  FL     G+ GVG G V  P+L  A    G+       VA+GT+L       V + 
Sbjct: 3   FLLGFLIAFAIGVTGVGAGTVTAPLLILAL---GLPPE----VAVGTALLFGFLVKVPAG 55

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGIL 140
             +   G +    L   +       V+ SL+++H+  +       +         L    
Sbjct: 56  AVYLLRGQVAPWPLLRLLLGGVPGVVLGSLLLAHLKGAKDLVLLLVGLTVVFSAGLGLWR 115

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
            LK      ER        +  G+  GF S   G    + T LL+     S  K   T  
Sbjct: 116 SLKGSFRGEERPGLLPPAAFGIGLEVGFSSAGAGA---LGTLLLLYATRLSPQKVVGTDL 172

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
               ++A     V +Y G    GL            +L +    +L       L+  + +
Sbjct: 173 LFGLVLALVGGGVHLYFGQVEEGL------------LLALASGGVLGALTGALLATRLPR 220

Query: 261 KYLTIG 266
           + L + 
Sbjct: 221 EPLRVA 226


>gi|296118784|ref|ZP_06837360.1| conserved hypothetical protein [Corynebacterium ammoniagenes DSM
           20306]
 gi|295968273|gb|EFG81522.1| conserved hypothetical protein [Corynebacterium ammoniagenes DSM
           20306]
          Length = 245

 Score = 42.8 bits (100), Expect = 0.051,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 82/237 (34%), Gaps = 24/237 (10%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  L  +  + YI L ++  F+  T+ G+ G G G +  P+++     +     +C+   
Sbjct: 1   MDTLISNDALMYIFLGLII-FIGSTVQGVIGFGLGTISTPIMALLKPDLVPVVVLCLAFI 59

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +  S              HR     + K++    F     T +    ++ +  + L    
Sbjct: 60  IACSTL------------HRAWAETDWKMVLYSNFARLPGTFLAVWALAVLTTNSLQLFI 107

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
               +   IL              +     I G ++GFL  +  +GG     + +L    
Sbjct: 108 GCAVIFTMILSSLGWTPKV-----NAPNTLIAGGLSGFLGTSTSIGG---PPMALLMKTF 159

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG-AVLIILPISIL 246
           +  KA  T A      +  +++     G        +++  + +  A+L ++  +  
Sbjct: 160 NPAKARGTLAATFVFGSIVSMVTLAIGGQITTYQLKYAV--IYLPLAILGLVAANYF 214


>gi|259501829|ref|ZP_05744731.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
 gi|259170154|gb|EEW54649.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
          Length = 251

 Score = 42.8 bits (100), Expect = 0.051,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 79/200 (39%), Gaps = 11/200 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+++     G      G GGG + + VL+  FQL           A  TS+    P  
Sbjct: 4   LLLMVIVGLAVGIFVISLGGGGGAIYLGVLTAIFQL-------SPSAAAATSIVTSLPAL 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           VM    + R G IN K+    +     +  V   +   + +        +  + +G+ ++
Sbjct: 57  VMGSWSYYRRGLINFKLGNRMLVAAIPSIFVGFFISPWLPERVYKLVIGLILMFLGVQLI 116

Query: 143 KRDRLYCER----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
            +     +     +        ++G++ G + G  G+ GG      +L  GAS+  A+AT
Sbjct: 117 IKVYRQPKEGRSARLSPQAASVLYGIMGGLMVGIAGLSGGGPITTGLLLLGASMASASAT 176

Query: 199 SAGVSALIAFPALLVRIYSG 218
           SA V   ++    L+ I  G
Sbjct: 177 SAYVLVGMSIVGALLHISGG 196


>gi|187922807|ref|YP_001894449.1| hypothetical protein Bphyt_0802 [Burkholderia phytofirmans PsJN]
 gi|187714001|gb|ACD15225.1| protein of unknown function DUF81 [Burkholderia phytofirmans PsJN]
          Length = 262

 Score = 42.8 bits (100), Expect = 0.051,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 89/270 (32%), Gaps = 35/270 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V+    G L GL GVGGG +M P+L   F       ++    A+GT L   A T  
Sbjct: 8   LLYSVSGLFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAIFCLLM 137
              + H   G+++ ++             +T +++             +        L+ 
Sbjct: 61  TGTLVHGLKGSVDWQVTLRLAAGSVPAATITLILLHRFGMDTPGAGRLIQVVLGAALLVT 120

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT--NLLMLF 187
            + ++ R         +    R+     +  + G V G L     VG G      LL+L+
Sbjct: 121 AVALVFRPQLAALGARKQRTPRQGRTLALTMLTGAVLGVLVSLTSVGAGAIGVTVLLLLY 180

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                 +   +    +  +              L G   W LG ++   +L +L  S+  
Sbjct: 181 PLLPTTRIVGSDIAHAVPLTL------------LAGAGHWLLGSIDWSMLLSLLVGSLPG 228

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             + + LS     K L    +  +      
Sbjct: 229 IAIGSYLSSRAPDKLLRNLLAATLTLVGVR 258


>gi|302384424|ref|YP_003820247.1| hypothetical protein Bresu_3318 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302195052|gb|ADL02624.1| protein of unknown function DUF81 [Brevundimonas subvibrioides ATCC
           15264]
          Length = 308

 Score = 42.8 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 8/130 (6%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG-VIAPTSVMSFME 88
              +G LS + GVGGG ++VP +  A +       +   V +GTSL  +I  T+V + ++
Sbjct: 182 GVFAGVLSAIMGVGGGFILVPAMLYALR-------MRASVVVGTSLFQIIITTAVTTILQ 234

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
             R+ T+++ +    +    +   + +          L     +  L +G+ M     + 
Sbjct: 235 AGRNQTVDIVLSTLLLTGGVVGAQLGARFAGRFRADVLRALLGLLILFVGMQMGLSLFVR 294

Query: 149 CERKFPDNYV 158
               F     
Sbjct: 295 PHDIFLLAPG 304


>gi|218902661|ref|YP_002450495.1| YunE [Bacillus cereus AH820]
 gi|218537069|gb|ACK89467.1| YunE [Bacillus cereus AH820]
          Length = 131

 Score = 42.8 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 50/110 (45%), Gaps = 7/110 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++    ++GT+  L G+GGG+++VP+L           S+   +A+GTS+  +  T +
Sbjct: 4   IMLLFIGLIAGTVGSLVGLGGGIIIVPLLIGL-------HSLSPQLAVGTSMVTVVFTGL 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            S + + +H  ++ K             ++ S     +++   +  F  F
Sbjct: 57  SSTLTYMKHKRVDYKSGLILFIGSGPGGIIGSWANKFLNQDTFSLYFGDF 106


>gi|158337917|ref|YP_001519093.1| hypothetical protein AM1_4804 [Acaryochloris marina MBIC11017]
 gi|158308158|gb|ABW29775.1| conserved hypothetical membrane protein [Acaryochloris marina
           MBIC11017]
          Length = 246

 Score = 42.8 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 66/196 (33%), Gaps = 14/196 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++ V SFLS  +S + G G  L+++P++S  +    +   I   + +G          
Sbjct: 3   FVVLGVVSFLSWFISMVAGGGSPLMLIPLVSFMYGAQAVAPVITTGMLLGNIQ------- 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                       I  ++    +  + + +++ +  +++++  +L     I  LLM     
Sbjct: 56  ----RLFYFWEDIEWEVTLWQLPGVIVGSILGAFTLNYINLEWLQFVIGISLLLMVANYW 111

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
             +           +     G    F SG +G  G I     +  YG       AT A  
Sbjct: 112 FGN--QESTFTLKTWQFLPLGFGNSFASGLIGSTGPIMNPAYIN-YGLLKEAMVATKAAN 168

Query: 203 SALIAFPALLVRIYSG 218
             L     L      G
Sbjct: 169 IILAHVIKLCAYASLG 184


>gi|111017183|ref|YP_700155.1| hypothetical protein RHA1_ro00161 [Rhodococcus jostii RHA1]
 gi|110816713|gb|ABG91997.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 255

 Score = 42.8 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 82/220 (37%), Gaps = 25/220 (11%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+++P L        +   +    A+ T+       +  + +   R   +N ++L  
Sbjct: 25  GGGLILIPALFL------VAPQLTPQAALATNKLTAFTGTSAAVVTFARRIPMNWRLLVP 78

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL--YCERKFPDN---- 156
              +  + + + +  +S +DK           + + + +  R +L     +  P      
Sbjct: 79  AGLLAAVASALGAATVSRIDKDVFIPLIMAVLVGVAVFVTIRPQLGTTLAKDPPTRRKVV 138

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            V  +   + GF  G  G G G F  +    F G    +    SA ++ +I   + L  +
Sbjct: 139 AVVLLSAGLLGFYDGLFGPGTGTFLIISFATFLGTEFVR----SAAMAKVINLGSNLGAL 194

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
              +   G   W+LG       L +   +++   + ++++
Sbjct: 195 VF-FAATGHVLWALG-------LGMAVCNVIGAVIGSRMA 226


>gi|88797883|ref|ZP_01113471.1| Predicted permease [Reinekea sp. MED297]
 gi|88779560|gb|EAR10747.1| Predicted permease [Reinekea sp. MED297]
          Length = 241

 Score = 42.8 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 33/110 (30%), Gaps = 11/110 (10%)

Query: 83  VMSFMEHRRHGTINMKI-LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +  ++  R    I   + LK     + I T+V   +   V ++ L   F    +      
Sbjct: 52  LSGYLTVRYRRQIQWSLMLKTIGPFMVIGTLVGLYVADLVPETQLRLLFGAIVVWFAARS 111

Query: 142 L-----KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
           L     K  +    R      + +  G+  G  +      GG      + 
Sbjct: 112 LWLAFDKNAQPNAHRALTTRVLTFAAGITHGLFAS-----GGPLLVYALT 156


>gi|237797756|ref|ZP_04586217.1| hypothetical protein POR16_02817 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331020606|gb|EGI00663.1| hypothetical protein POR16_02817 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 97

 Score = 42.8 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 7/101 (6%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGG V++P L++          + M   + TSL VIA  S  S +     G ++  +   
Sbjct: 1   GGGFVIIPALTRY-------SDLDMKSVVATSLAVIALVSAGSVIIASLSGVMHWAVGAP 53

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +        V    +  ++    L + FA+  L+  ++++ 
Sbjct: 54  FALGAVAGLVGGRQISRYLAGPRLQQLFAVCGLVAAVMLVL 94


>gi|221633312|ref|YP_002522537.1| hypothetical protein trd_1332 [Thermomicrobium roseum DSM 5159]
 gi|221156666|gb|ACM05793.1| hypothetical membrane protein, conserved, family [Thermomicrobium
           roseum DSM 5159]
          Length = 281

 Score = 42.8 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 7/97 (7%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           +VPVL+  F L        +H+A+G S+  I  TS  +   + R    N++         
Sbjct: 33  VVPVLTLVFGLD-------IHLAIGASIVSIIATSSGAAAAYVRDHLTNVRAAILLELAT 85

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
               V+ +L+   +    L   FA F LL    M +R
Sbjct: 86  STGAVLGALLAPFLPSRALYFLFAGFLLLSLGPMARR 122



 Score = 40.4 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 34/80 (42%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           + M V+  TS  +I  T+  S   +   G +   I    +  +   ++V + ++  +   
Sbjct: 197 MPMKVSTATSNFMIGVTAAASAGVYFWRGDVVPIIATPVMLGVLAGSLVGAQLLLRLTNR 256

Query: 125 FLNKAFAIFCLLMGILMLKR 144
            + + F    L++ + ML R
Sbjct: 257 RVRQLFIPILLIIAVQMLLR 276


>gi|160896385|ref|YP_001561967.1| putative integral membrane protein [Delftia acidovorans SPH-1]
 gi|160361969|gb|ABX33582.1| putative integral membrane protein [Delftia acidovorans SPH-1]
          Length = 278

 Score = 42.8 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 54/161 (33%), Gaps = 11/161 (6%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            V+ Y+  + +   L+     L G   GL+ V        + G    + +  A   +  +
Sbjct: 2   SVIQYVMFLALVG-LATFCQNLTGFAFGLIFV-------GVAGATHLMGIGDAANVACLL 53

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF-CLL 136
                V     HR+       +LK  +    I  +   L++  +  + L+    +    +
Sbjct: 54  SVVNGVAYLRAHRQ--VPQWTLLKPMLISSVIGVIGGVLLLQWLSGNALSGLRMLLGLAI 111

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
           +   +L   +     +       ++ G+ +G L G     G
Sbjct: 112 VACALLLLLQKQVNAQVSGPVSLWVAGVASGVLGGLFATPG 152


>gi|110834660|ref|YP_693519.1| hypothetical protein ABO_1799 [Alcanivorax borkumensis SK2]
 gi|110647771|emb|CAL17247.1| membrane protein, putative [Alcanivorax borkumensis SK2]
          Length = 255

 Score = 42.8 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 74/227 (32%), Gaps = 25/227 (11%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             +   +A GT    +   S  +  +  + G++    L   +    + T+V +L  + + 
Sbjct: 41  SGMSAALANGTMRVAVLIQSAEAVRQFNKRGSMPFADLPAILVPSLLGTLVGALAAAFLP 100

Query: 123 KSFLNKAFAIFCLLMGILMLKRDR----------LYCERKFPDNYVKYIWGMVTGFLSGA 172
           ++ L     I  +++ +LM+ R            L            +  G   GF+   
Sbjct: 101 ETILKPVLLITLVVVALLMVLRPSQMSPDPNSVPLSPNTSLSGWIGLFFAGAYGGFVQAG 160

Query: 173 LGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           +G    +   +L       + ++ A    ++      AL + +  G             V
Sbjct: 161 VGF---VLLAVLAGQLRYDLLRSNALKLAITGSFTILALAIFVARGQ------------V 205

Query: 233 NIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
                L++   S++   L    ++ +  + L     +++       A
Sbjct: 206 AWLPGLVVAAGSLIGVRLGVSFAHAVSPRVLKRILLVMVLAVCLAAA 252


>gi|331005194|ref|ZP_08328589.1| hypothetical protein IMCC1989_1224 [gamma proteobacterium IMCC1989]
 gi|330420999|gb|EGG95270.1| hypothetical protein IMCC1989_1224 [gamma proteobacterium IMCC1989]
          Length = 246

 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 46/101 (45%), Gaps = 8/101 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT-INMKILKDWI 104
            ++VP L+  F+       + M  A+ +SL +I+  S + F ++      IN   +   +
Sbjct: 147 FIIVPALTLLFK-------MKMRQAVASSLVIISIVSSVGFYQYLVLTPIINTHFMSYLM 199

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
               +   +   +  ++  + L K FA+  ++M  +ML ++
Sbjct: 200 AGSAMGMGLGIFLSRYISSAKLQKIFAVIMVIMTFIMLAKN 240



 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 82/233 (35%), Gaps = 35/233 (15%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+G SL V+A ++ +    H + G+I       +  V    T +   +  ++    +   
Sbjct: 15  AIGISLAVVAFSAAIGVFHHFKSGSIAWMPTIIFAVVGSALTPLGYQLGQYLTPLLITIL 74

Query: 130 FAIFCLLMGILMLKRDRL-----------------------YCERKFPDNYVKYIWGMVT 166
           F+I  + + I M  +  L                            +P      +   +T
Sbjct: 75  FSILTVFIAITMWNKSHLNSRVLRVNTSPKQEESVNAIDAAKLAITWPSTAAIILAAAIT 134

Query: 167 GFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           G LSG LGVGGG      +   +   + +A A+S  + ++++       +     +N   
Sbjct: 135 GVLSGLLGVGGGFIIVPALTLLFKMKMRQAVASSLVIISIVSSVGFYQYLVLTPIINTHF 194

Query: 226 PWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                      +  ++  S +   L   LS  I    L   F++IM   +F+ 
Sbjct: 195 -----------MSYLMAGSAMGMGLGIFLSRYISSAKLQKIFAVIMVIMTFIM 236


>gi|212704924|ref|ZP_03313052.1| hypothetical protein DESPIG_02991 [Desulfovibrio piger ATCC 29098]
 gi|212671588|gb|EEB32071.1| hypothetical protein DESPIG_02991 [Desulfovibrio piger ATCC 29098]
          Length = 351

 Score = 42.8 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 29/251 (11%), Positives = 66/251 (26%), Gaps = 57/251 (22%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-- 121
              M  A+GT +  +A  S++S + H + G ++ K+    +    +   + + M+  +  
Sbjct: 50  GFPMAFAVGTDVAHMAGKSLISTLRHGKFGNVDYKLGLTMLAGTIVGVELGAQMLMWLER 109

Query: 122 ---DKSFLNKAFAIFCLLMGILMLKR---DRLYCERKFPDNYVKYIWGMVTGFLSGALGV 175
                  +   + +  + M  ++       +                     + S    +
Sbjct: 110 LGSVDKVVRWLYVVLLICMAWMVFHDVALRKKKEREAAARGEELSATATGIDWASKLHAI 169

Query: 176 ---------GGGIFT----------------------------NLLMLFYGASIYKATAT 198
                    G GI+                               L+   G   + A  T
Sbjct: 170 RIPPMVHFHGAGIYCSAWLPIVVSLFTGWLAGILGIGGGLIRMPALVYLVGCPTHVAVGT 229

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                A+          + G               + A LI+L  + +   +    +  I
Sbjct: 230 DLFEVAISGLYGAASFTFKGRTE------------LVAALIMLVGAAIGAQVGAVATKYI 277

Query: 259 GKKYLTIGFSM 269
               + I F  
Sbjct: 278 KGYGIRIAFGC 288



 Score = 38.1 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 36/123 (29%), Gaps = 7/123 (5%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L               HVA+GT L  +A + +         G   +      +    I
Sbjct: 213 PALVYLV-------GCPTHVAVGTDLFEVAISGLYGAASFTFKGRTELVAALIMLVGAAI 265

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
              V ++   ++    +  AF    L     ++ +        +          +V GF+
Sbjct: 266 GAQVGAVATKYIKGYGIRIAFGCAVLGCLASVVLKLIQPYFPAYAGFINGVATVVVLGFV 325

Query: 170 SGA 172
           S  
Sbjct: 326 SAI 328


>gi|313124366|ref|YP_004034625.1| permease [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|312280929|gb|ADQ61648.1| Predicted permease [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 246

 Score = 42.8 bits (100), Expect = 0.056,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 80/257 (31%), Gaps = 27/257 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              +I+   L+G ++ +  +   LV  P L   F L  +  ++       T+   +  T 
Sbjct: 3   FIYLIILGVLAGIVAAVASM-ASLVSYPGLL-LFGLSPVSANM-------TNTAALVTTG 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             S     +    +   L  + F      ++   ++         K    F L    L+L
Sbjct: 54  FGSLSSCLKEMRGHWGELWRYAFFQLTGALIGGWLLVQFPGKIFQKLVPFFVLFSAGLLL 113

Query: 143 KRDRLYCERKF--PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT-ATS 199
              R    ++         Y    V G  +G  G   G+ T + +     S +    A  
Sbjct: 114 YSGRKKHPKQATKLGRIGAYFGLFVAGIYAGYFGAASGVLTLIFLTALSDSSFVVINAIK 173

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           + + +L    AL +  + G             VN      +     +      K+   + 
Sbjct: 174 SVIGSLANLVALALFAFKGG------------VNWPVAFPLAIGLFIGGYFGQKMIKYLK 221

Query: 260 K---KYLTIGFSMIMFT 273
               +++T  FS+ +  
Sbjct: 222 PVWVRWITACFSVFLAI 238



 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 7/114 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
              F++G  +G FG   G     VL+  F     D S  +  A+ + +G +A    ++  
Sbjct: 134 FGLFVAGIYAGYFGAASG-----VLTLIFLTALSDSSFVVINAIKSVIGSLANLVALALF 188

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                G +N  +       L I       MI ++   ++    A F + + I +
Sbjct: 189 AF--KGGVNWPVAFPLAIGLFIGGYFGQKMIKYLKPVWVRWITACFSVFLAIYL 240


>gi|78184528|ref|YP_376963.1| hypothetical protein Syncc9902_0953 [Synechococcus sp. CC9902]
 gi|78168822|gb|ABB25919.1| conserved hypothetical protein [Synechococcus sp. CC9902]
          Length = 258

 Score = 42.8 bits (100), Expect = 0.057,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 94/262 (35%), Gaps = 31/262 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + V + +S  LS   G G GLV +P L            +    A+ T         V
Sbjct: 10  LALAVVALISNGLSAFAGGGAGLVQLPALILL--------GLDFSTALATHKVASVALGV 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   H R  +++ ++    +       V+ + ++  +  +      A   L +G+   +
Sbjct: 62  GAAGRHWRASSLDRRLSALVLCAGLPGVVIGANLVLAIPDNTATICLAFLTLGLGLYSSR 121

Query: 144 RDRLYCERKFPDNYVKYIWGMV-----TGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
           R RL  +          +W         G ++G+L  G G+F  L ++ ++G S  +A A
Sbjct: 122 RPRLGNDEHRRAVTGTTLWVGAFGLFTIGIINGSLTSGTGLFVTLWLVRWFGLSYTRAVA 181

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGF---VNIGAVLIILPISILITPLATKL 254
                            I  G G NG+   +LG    ++   +  ++  S++   +    
Sbjct: 182 --------------HTLILVGLGWNGIGALTLGLKGDIHWQWLPALIVGSLIGGYIGAHW 227

Query: 255 SYMIGKKYLTIGFSMIMFTTSF 276
           S   G K +   F ++     F
Sbjct: 228 SIKQGDKVVKQAFEILALIMGF 249


>gi|298492848|ref|YP_003723025.1| hypothetical protein Aazo_4693 ['Nostoc azollae' 0708]
 gi|298234766|gb|ADI65902.1| protein of unknown function DUF81 ['Nostoc azollae' 0708]
          Length = 250

 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 88/262 (33%), Gaps = 41/262 (15%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
           + GL G+GG  ++ P+L   FQ       +   VA+ + +       ++  ++H +  T+
Sbjct: 1   MVGLTGIGGASLITPMLIFVFQ-------VAPSVAVSSDVVAATLMMLVGSVKHCQQQTL 53

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKS----------FLNKAFAIFCLLMGILMLKRD 145
           + +I+K         ++V   ++  + +S           L         L+ ++ L   
Sbjct: 54  DTEIVKWLPMGSVSNSLVGVRILHLIRQSGEYNLDQILLRLLGLMISLVTLLALIQLLFI 113

Query: 146 RLYCERKFP-----------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIY 193
             +     P             ++    G +     G   V  G    L+++ F+     
Sbjct: 114 TFFPNFNLPKLPKLDITTNRGRFLTITIGEILDCFVGLTSVSSGSMFALVLIGFFRLDTR 173

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           K   T     A++     L              ++LG V+   VL I   S     LA K
Sbjct: 174 KLVGTDIAQPAILLLFTSLG------------DFTLGTVDWSLVLPIWLGSFPGFLLAAK 221

Query: 254 LSYMIGKKYLTIGFSMIMFTTS 275
           +  +  +  L      I+   S
Sbjct: 222 ICQITPQHPLRFIIYAILMMVS 243


>gi|258593860|emb|CBE70201.1| conserved membrane protein of unknown function [NC10 bacterium
           'Dutch sediment']
          Length = 120

 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 8/125 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L ++   ++G  SGL G+GGG++++P L   F        +  H A GT+L ++ 
Sbjct: 1   MTEILLYVLLGVVAGIFSGLIGIGGGIIIIPALVLVF-------GLSQHQAQGTTLALLV 53

Query: 80  P-TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           P   +++   +   G ++++I            ++ + +   +  S L K F I   L+ 
Sbjct: 54  PPIGLLAAWTYYSKGYVDLRIATLICIGFFAGGLLGAKLAVGLSGSVLEKLFGIALFLIS 113

Query: 139 ILMLK 143
           + M+ 
Sbjct: 114 LKMIF 118


>gi|282899003|ref|ZP_06306985.1| hypothetical protein CRC_00283 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281196143|gb|EFA71058.1| hypothetical protein CRC_00283 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 196

 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 74  SLGVIAPT-SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS--HVDKSFLNKAF 130
           S  +I  T S++  + H ++  IN +    +     +   + + +     +  +     F
Sbjct: 3   STIIIVGTVSLIGLIPHWKNRNINFRKAFIFGSATMLGAFLGAKIAGLPFITDNLQMLLF 62

Query: 131 AIFCLLMGILMLKRDRLYCERK 152
           AI  L+   LM++R R   ++ 
Sbjct: 63  AIVMLIAAFLMIRRSRQNPDKS 84



 Score = 35.4 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 17/44 (38%)

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           + +     +   +D   L K F  F + +   +L +++     K
Sbjct: 130 LGSFFGGYLSGFIDGRKLQKYFGYFLIAVAAFVLFQNQTAATGK 173


>gi|113474198|ref|YP_720259.1| hypothetical protein Tery_0309 [Trichodesmium erythraeum IMS101]
 gi|110165246|gb|ABG49786.1| conserved Hypothetical protein F26A1.8 [Trichodesmium erythraeum
           IMS101]
          Length = 287

 Score = 42.8 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 93/251 (37%), Gaps = 27/251 (10%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
                ++G   +GGG V  PV +K    +   D+    +A+ +     A T+++      
Sbjct: 2   VFGSAIAGGTSLGGGAVAFPVFTKIL-HIPPSDAKIFSLAIQSVGMTAAATTILLTGIK- 59

Query: 91  RHGTINMKILKDWIFVLPITTVVT-SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY- 148
               + ++++        +   V  + +   V    +  +F +      I +LK ++   
Sbjct: 60  ----VELRVILWGSLGGFLGVFVGSAFLAPFVPPDVIKMSFTVMLTSFAITLLKLNQKPR 115

Query: 149 ------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATSAG 201
                    +  +  +  I G + G +SG +G G  +F  +++++ +G     AT TS  
Sbjct: 116 ELYQVMPVWRVKEQRIWLIVGFLGGVMSGLVGSGIDVFTFSVMVVLFGLCEKVATPTSVI 175

Query: 202 VSALIAFPALL--VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           + A+ A    +  V ++  +       W             +P+ ++  PL      ++ 
Sbjct: 176 LMAVNAIAGFILQVFVFQDFIDPVRSYW----------FAAIPVVVVGAPLGAICCNLLP 225

Query: 260 KKYLTIGFSMI 270
           ++ +      +
Sbjct: 226 RETIANILIGL 236


>gi|121534283|ref|ZP_01666107.1| protein of unknown function DUF81 [Thermosinus carboxydivorans
           Nor1]
 gi|121307053|gb|EAX47971.1| protein of unknown function DUF81 [Thermosinus carboxydivorans
           Nor1]
          Length = 295

 Score = 42.8 bits (100), Expect = 0.059,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 68/257 (26%), Gaps = 51/257 (19%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L   F       +I   VA+G+S+  I  T+  S  +H     I+ K+         
Sbjct: 41  VPALRIIF-------NIPYPVAIGSSMLHIMLTATFSAYKHWAQKNIDPKLGIFMAIGSL 93

Query: 109 ITTVVTSLMISHVDKS-----FLNKAFAIFCLLMGILMLKRDRLYCERKFPD-------- 155
                   ++  +         ++  F +    +   M          +           
Sbjct: 94  FGAESGIRLLQVIRAWGTVDIVISLCFLVLMTSVAAFMFYESTRAGIEEPKTVFGEMLKN 153

Query: 156 ---NYVKYIWGMVTGFLSGALGVGGGIF----------------TNLLMLFYGASIYKAT 196
                +          +S  + +    F                  L++   G     A 
Sbjct: 154 CKLPPLVSFARSDIVCISAWIPITLSFFVGCLTGLLGIGGGFINFPLMVYLIGVPTRVAV 213

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
            T           A    +              GF++   V +++  S++   L  KL  
Sbjct: 214 GT----GTFQVLVASAYCVARNLQE--------GFIDFLLVFLMVLGSVVGVNLGVKLCV 261

Query: 257 MIGKKYLTIGFSMIMFT 273
           +I  +     F+ I+  
Sbjct: 262 LINVRNTRKYFACILLL 278


>gi|332141849|ref|YP_004427587.1| hypothetical protein MADE_1012265 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551871|gb|AEA98589.1| hypothetical protein MADE_1012265 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 302

 Score = 42.8 bits (100), Expect = 0.059,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 72/225 (32%), Gaps = 32/225 (14%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG- 76
            ++    L      +    +   G GGG+V VP  +          S      + TS   
Sbjct: 33  QLIKEFGLFSGLGVIGAIFANATGAGGGVVFVPFFNYL--------SFSPQSVVATSFAI 84

Query: 77  -VIAPTSVMSFMEHRRHGTIN----MKILKDWIFVLPITTVVTSLMISHVD--------- 122
                T+      H      +     K L   + +   T++       +           
Sbjct: 85  QCCGMTAGALTWAHYYKKQHSHDNYWKALPSALMLTIPTSICGVGFAQYSSQSNLLLEHL 144

Query: 123 ---KSFLNKAFAIFCLLMGILML------KRDRLYCERKFPDNYVKYIWGMVTGFLSGAL 173
               + L+ AF  F +++ + +       KR     + +  D       G + G ++  L
Sbjct: 145 WGGANNLHIAFGSFSIVLALAIFASVPLMKRTHFEKDLQSKDLLGLPFIGFLGGVITAWL 204

Query: 174 GVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            VG G    + ++  G ++  + A +  +SA   + AL    + G
Sbjct: 205 SVGVGELVAVYLIIRGFNVTMSIAIAVILSAFTVWSALPYHAFIG 249


>gi|15827152|ref|NP_301415.1| hypothetical protein ML0468 [Mycobacterium leprae TN]
 gi|221229630|ref|YP_002503046.1| hypothetical protein MLBr_00468 [Mycobacterium leprae Br4923]
 gi|466837|gb|AAA17112.1| u1177b [Mycobacterium leprae]
 gi|2193910|emb|CAB09646.1| hypothetical protein MLCL581.28c [Mycobacterium leprae]
 gi|13092700|emb|CAC29976.1| putative membrane protein [Mycobacterium leprae]
 gi|219932737|emb|CAR70561.1| putative membrane protein [Mycobacterium leprae Br4923]
          Length = 260

 Score = 42.8 bits (100), Expect = 0.059,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 84/262 (32%), Gaps = 34/262 (12%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +V ++  I +A F +G ++ L G G  L+  P L           +  M  A+G     
Sbjct: 1   MLVSHLATIGLAGFGAGAINALVGSGT-LITFPTLVALGYS---PVTSTMSNAVG----- 51

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +    V +   +R         L+  I +      + + ++ H+ +        +  +L 
Sbjct: 52  LVAGGVSATWGYRAELGDRWSRLRWQIPMSLTGAALGAFLLLHLPEKVFTAIVPMLLVLA 111

Query: 138 GILMLKRDRL-------------YCERKFPDNYVKYIWGMV-TGFLSGALGVGGGIFTNL 183
            +L++   R+               E   P        G        G    G GI    
Sbjct: 112 LVLVVAGPRIQSWTRCRAKAAVNRAEHTTPAQMAMLALGTFAVSVYGGYFTAGQGILLVS 171

Query: 184 LM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           LM +    S+ +  A    +S L+   A +      +            +N  A  +I  
Sbjct: 172 LMSILLPESMQRINAAKNLLSMLVNLTAAVGYTLVAFDR----------INWSAAGMIAA 221

Query: 243 ISILITPLATKLSYMIGKKYLT 264
            S++   + T+ +  +    L 
Sbjct: 222 SSLVGGLVGTRYARRLSPNVLR 243


>gi|332307276|ref|YP_004435127.1| hypothetical protein Glaag_2922 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332174605|gb|AEE23859.1| protein of unknown function DUF81 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 319

 Score = 42.8 bits (100), Expect = 0.062,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 61/168 (36%), Gaps = 17/168 (10%)

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLK------RDRLYCERKFPDNYVKYIWGMVTGF 168
           S   +      L+  F +F +++ I M        R  L  + +  D+ +  I  +  G 
Sbjct: 158 SWFGAGAQGDKLHIGFGVFSIMLAISMFLMVALAGRGSLKTQLRRLDSILLPIICICGGV 217

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           ++  L +G G    + ++  G ++  + A +  +SA   +  ++  +             
Sbjct: 218 ITAYLSIGVGELLAVYLIMRGFNVTFSIACAVILSAATVWSGVVHHVMISQA-------- 269

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              V    VL   P +++   LA +L       +L + F+  +     
Sbjct: 270 ---VYWPVVLFAGPGAVIGGILAKRLVLHFSPTHLKLFFASWILILGA 314


>gi|188579398|ref|YP_001922843.1| hypothetical protein Mpop_0116 [Methylobacterium populi BJ001]
 gi|179342896|gb|ACB78308.1| protein of unknown function DUF81 [Methylobacterium populi BJ001]
          Length = 268

 Score = 42.8 bits (100), Expect = 0.062,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 62/180 (34%), Gaps = 15/180 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L+    +         HVA+GTS   ++ ++  + +   R G +  +    +     
Sbjct: 33  VPLLTYVVGVS------SPHVAIGTSALAVSVSAAGNLVSQWRAGNVKWRCAAVFSAAGI 86

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP----DNYVKYIWGM 164
           +  +  S     VD   L   F +  L++G LML++ R   + +         V   W +
Sbjct: 87  LGALAGSAAAKAVDGQSLLALFGVVMLVVGGLMLRKRRGEGDPEVRLTKISAPVLLPWLL 146

Query: 165 VTGFL-----SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
             GF            GG +    LML     +  A  TS    +            SG 
Sbjct: 147 GIGFAVGLFSGFFGIGGGFLIVPGLMLATSMPLPMAIGTSLVAVSAFGAATAASYAVSGL 206


>gi|325525482|gb|EGD03292.1| putative permease [Burkholderia sp. TJI49]
          Length = 262

 Score = 42.8 bits (100), Expect = 0.063,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 82/245 (33%), Gaps = 31/245 (12%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L   F        +    A+GT L   A T     + H   G+I+ +I       
Sbjct: 31  LMTPILVLLF-------GVHPATAVGTDLLYAAATKATGTLVHGLKGSIDWRITGRLAAG 83

Query: 107 LPITTVVTSLMI------SHVDKSFLNKAFAIFCLLMGILMLKRD--------RLYCERK 152
               + VT  ++      S      +     I  LL  + ++ R                
Sbjct: 84  SVPASAVTLWVLHTHGVNSPGTARTIQLVLGIALLLTSLALIFRPQLAAFAARNPLAPSP 143

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
               +   + G V G L     VG G     ++L     +Y A AT+  V + IA    L
Sbjct: 144 ARTLWSTVLTGAVLGVLVSMTSVGAGAIGVTVLLL----LYPALATTRIVGSDIAHAVPL 199

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
                   + G+  W LG V+   +L +L  S+    L + LS    ++ L    +  + 
Sbjct: 200 TL------VAGMGHWLLGSVDWSMLLSLLLGSLPGIVLGSLLSARAPERLLRNLLAATLV 253

Query: 273 TTSFV 277
                
Sbjct: 254 AVGVR 258



 Score = 39.7 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 49/117 (41%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  +  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 151 VLTGAVLGVLVSMTSVGAGAIGVTVLLLLY------PALATTRIVGSDIAHAVPLTLVAG 204

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M H   G+++  +L   +       V+ SL+ +   +  L    A   + +G+ ++ 
Sbjct: 205 MGHWLLGSVDWSMLLSLLLGSLPGIVLGSLLSARAPERLLRNLLAATLVAVGVRLVL 261


>gi|307353471|ref|YP_003894522.1| hypothetical protein Mpet_1324 [Methanoplanus petrolearius DSM
           11571]
 gi|307156704|gb|ADN36084.1| protein of unknown function DUF81 [Methanoplanus petrolearius DSM
           11571]
          Length = 269

 Score = 42.8 bits (100), Expect = 0.063,   Method: Composition-based stats.
 Identities = 53/266 (19%), Positives = 89/266 (33%), Gaps = 38/266 (14%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G ++ + G+GGG + VPVL   F    I        A+  SL +    S  S + +    
Sbjct: 17  GMIASILGIGGGTLNVPVLILVFSFDQI-------TAIALSLTIGVAISFTSMVNYAWQQ 69

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
            I  K            +V++ L+   +    L        L++   +LK D +      
Sbjct: 70  RILYKTALFLGVPAVGVSVLSVLVSISLPVITLKLILIAILLVIASTLLKPDLISLPEIK 129

Query: 154 PDN--------------------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
                                       WG   G L+G  G+GGG      M+      +
Sbjct: 130 KGPEYHDGCKNRYGDEFSGDFHALHMITWGSSGGLLNGLTGLGGGSINVPAMIAAKIPPH 189

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            ATATS  V  L    A ++    G         SLGF     + + +  ++      T+
Sbjct: 190 YATATSTMVVFLACMAASIMHAELGN------IHSLGF-----LALYITGAVCGAVAGTR 238

Query: 254 LSYMIGKKYLTIGFSMIMFTTSFVFA 279
            +  +    L+ GF + +     + A
Sbjct: 239 YARKLRSSQLSFGFGLFLIFVCIIMA 264



 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 1/85 (1%)

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN-MKILKDWIFVLPITTVVTSLMIS 119
           I   I  H A  TS  V+    + + + H   G I+ +  L  +I       V  +    
Sbjct: 182 IAAKIPPHYATATSTMVVFLACMAASIMHAELGNIHSLGFLALYITGAVCGAVAGTRYAR 241

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKR 144
            +  S L+  F +F + + I+M   
Sbjct: 242 KLRSSQLSFGFGLFLIFVCIIMAIN 266


>gi|68164591|gb|AAY87320.1| predicted membrane protein [uncultured bacterium BAC17H8]
          Length = 249

 Score = 42.8 bits (100), Expect = 0.064,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 26/257 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++ A    G ++GL G G         +  F L  +   +    A+  +L     T 
Sbjct: 9   LFFLVAAGLSGGFVNGLAGFG---------TSLFALGWLLQVMPPREAVAIALACSIATG 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V      RR  +I+++ L  ++    +   +    +S +D   L+    I  L  G    
Sbjct: 60  VPGIWAVRR--SIDVRRLSVFLLPALVGVPLGFAALSLIDARMLSSIVGIMLLTYGGYFA 117

Query: 143 KRDRLY--CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
            R  L     R  P        G + G ++G      G   ++ +               
Sbjct: 118 LRRNLPELSGRWLPVEAGIGFVGGILGAMAGL----SGALPSMWLAMRPWPKGVQRGVLQ 173

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
             + +I   A ++    G     +         +  + + LP S +   +   L   +  
Sbjct: 174 PFNMVILSAATVMLALDGGFDATV---------LRNLALTLPASAVGAAIGLWLFRKLSD 224

Query: 261 KYLTIGFSMIMFTTSFV 277
                    +M  +  V
Sbjct: 225 HGYRRLLIGLMLVSGIV 241


>gi|15673099|ref|NP_267273.1| hypothetical protein L129283 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12724077|gb|AAK05215.1|AE006344_4 conserved hypothetical protein [Lactococcus lactis subsp. lactis
           Il1403]
          Length = 921

 Score = 42.8 bits (100), Expect = 0.064,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 62/191 (32%), Gaps = 35/191 (18%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPV---LSKAFQLMGIDDSICMHVAM 71
           S   +   +    + + + G +  L        M PV   LS    L  +     +  A 
Sbjct: 28  SAKLLGHLLQFASIYALIVGIVGWL--------MPPVQKLLSGFLYLFALPTDFSIFNA- 78

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPIT-TVVTSLMISHVDKSFL---- 126
                 I    + S + HRR   + ++I+   +  +      + +     V K  L    
Sbjct: 79  ------IVLFILASSIRHRRRLALWIEIIYFQLAFVAFGLIFLLAYFFGLVTKEALDMSQ 132

Query: 127 ----NKAFAIFCLLM----GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG 178
               +  F I  +++     +LM+     +  +     + K I     GF+     +GG 
Sbjct: 133 FSIFSLLFVILGVVVSLATAVLMILSRNAFPTKIVNGTWWKGIIIAAVGFVCSI--IGG- 189

Query: 179 IFTNLLMLFYG 189
                 + F+G
Sbjct: 190 -VFVSFLTFHG 199


>gi|48478295|ref|YP_024001.1| hypothetical protein PTO1223 [Picrophilus torridus DSM 9790]
 gi|48430943|gb|AAT43808.1| hypothetical protein PTO1223 [Picrophilus torridus DSM 9790]
          Length = 263

 Score = 42.4 bits (99), Expect = 0.064,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 4/129 (3%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  +    L I++  L G   GL G GG ++ VP+L   F  +G+++    H+A+GT+  
Sbjct: 2   EITIIMYILSIISGILVGFSLGLIGGGGSILAVPLLIY-FVGLGVEN---THLAIGTTAL 57

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   + ++F +H R    N+KI   +  +  I  ++ SL+   +  S L   F+   + 
Sbjct: 58  AVGINAFINFYQHLRKKNANLKIGGFFALIGVIGVIIGSLLGLIIKGSSLLFLFSFLMMG 117

Query: 137 MGILMLKRD 145
           +GI M    
Sbjct: 118 IGIYMYISK 126


>gi|302837355|ref|XP_002950237.1| hypothetical protein VOLCADRAFT_104627 [Volvox carteri f.
           nagariensis]
 gi|300264710|gb|EFJ48905.1| hypothetical protein VOLCADRAFT_104627 [Volvox carteri f.
           nagariensis]
          Length = 973

 Score = 42.4 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 7/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++    L+G  SGL G+GGG ++ P+L+       +   +     +GTSL  +   S+
Sbjct: 254 AVLMATGTLAGFASGLLGIGGGTIVTPLLT-------VATGLPQLAVLGTSLTAMVVPSL 306

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +  M+H R G ++  +                 +   + +  L   F    L +    L
Sbjct: 307 VGLMQHARLGNVDWVMAAALAAGTMAGGAAGGRLALEMPEGVLEWVFCFGMLFLARKTL 365


>gi|293408076|ref|ZP_06651916.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291472327|gb|EFF14809.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 268

 Score = 42.4 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 47/132 (35%), Gaps = 12/132 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I + +V+    G ++ L GV GG +++P +   F          + +A   SL +  
Sbjct: 144 LAMIIVGVVSGGFIGIVAALLGVAGGELLIPTIVILFGAD-------IKLAGSLSLMISL 196

Query: 80  PTSVMSFMEHRRHGTINM-----KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           PT ++ F  +       +      +    +    I   +  LM+       L     +  
Sbjct: 197 PTMIVGFSRYINADAFLILKQERTLFVWMVIGSVIGAAIGGLMVGLFPLKALMTLLGVIL 256

Query: 135 LLMGILMLKRDR 146
           L+  I   K  R
Sbjct: 257 LISAIKTFKHTR 268


>gi|113968405|ref|YP_732198.1| hypothetical protein Shewmr4_0060 [Shewanella sp. MR-4]
 gi|113883089|gb|ABI37141.1| protein of unknown function DUF81 [Shewanella sp. MR-4]
          Length = 245

 Score = 42.4 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 83/260 (31%), Gaps = 31/260 (11%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  + I A  ++G     F  G G + VP+L      + I  +    + +   L  +   
Sbjct: 7   FWLVAIPAVLITGISKSGFAGGVGGLTVPLL-----ALAISPATAAAIMLP-LLIYMDFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           SV S+         N + L   +    +   +   +   +++ +L        L  G+  
Sbjct: 61  SVRSWWGQH-----NPRQLWILLPAAIVGIGMAYWLFDRLNEDYLRAILGCVSLGFGLYG 115

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA----TA 197
           L        +  P   V  + G+  GF S     GG       +  Y   +  A     A
Sbjct: 116 LILGDKTQAK--PSPLVGRLCGLTAGFTSFVAHAGG-----PPLNAYLLPLRLAKPEFLA 168

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T+    A++    L+     G    G         NI   L++ P++ L   L   +   
Sbjct: 169 TAVVFFAVVNLVKLVPYSLLGQINQG---------NILISLLLAPLAWLGVKLGLAIQDK 219

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           I  +       ++M      
Sbjct: 220 ISDRLFKRIILILMVLVGIR 239


>gi|317486163|ref|ZP_07945005.1| hypothetical protein HMPREF0179_02360 [Bilophila wadsworthia 3_1_6]
 gi|316922583|gb|EFV43827.1| hypothetical protein HMPREF0179_02360 [Bilophila wadsworthia 3_1_6]
          Length = 245

 Score = 42.4 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 61/187 (32%), Gaps = 21/187 (11%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
               +  A FL+G + G  G G  ++M+ +L+  F    +               VI   
Sbjct: 8   LFAYVFTAVFLAGIVRGATGFGFSMIMIVLLTLFFPPAQVAP-------------VILFW 54

Query: 82  SVMSFMEH--RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            V++ + H    +  ++ K L+     + + T      +  +    +        L++  
Sbjct: 55  EVLASIGHLPFVYKQVHWKSLRWLALGVALGTPFGVYCLVSIPVDAMRLIINAVVLILTS 114

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
           ++    R       P      +   V    S   G        +++ F  + +  A   +
Sbjct: 115 MLYCGLRPKNAPTPPQTTGVGLLAGVINGASANGG------PPIILFFLSSPLGAAVGRA 168

Query: 200 AGVSALI 206
           + ++  +
Sbjct: 169 SLIAFFL 175


>gi|300709531|ref|YP_003735345.1| hypothetical protein HacjB3_00800 [Halalkalicoccus jeotgali B3]
 gi|299123214|gb|ADJ13553.1| hypothetical protein HacjB3_00800 [Halalkalicoccus jeotgali B3]
          Length = 253

 Score = 42.4 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 91/262 (34%), Gaps = 26/262 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  +  + + S L GT+    G G G+++V  L     L   + +       GTS    A
Sbjct: 7   IGVLFALTLLSVLGGTIVSTIGPG-GILIVTGLYLLTPLSAAEVA-------GTSSATFA 58

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +++  +   R G I+ ++         + T +     +++ +       A     +G 
Sbjct: 59  VGAILGSLVFARSGEIDWRLAGVVSTGAAVGTWLGVQANAYLSRDLYGLLLAAMLAAVGC 118

Query: 140 LMLKR------DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
           +++ R       R+   R+  D     + G++ G   G LG+GG   +   ++  G  + 
Sbjct: 119 IIVYREYRDLEPRIELGRERSDLVGFVVIGLLIGVFGGLLGIGGAAVSAPALVLVGVPML 178

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
              A +  +    A       +     +  L            V ++    +    +   
Sbjct: 179 VTIAVTQVIVLATALFTTANYLLLDAVVAPL------------VFVLTGAYLAGVTIGWW 226

Query: 254 LSYMIGKKYLTIGFSMIMFTTS 275
           L++ I    L +   +++   +
Sbjct: 227 LAHRIEAGRLKLALGVVLVGLA 248


>gi|257068725|ref|YP_003154980.1| putative permease [Brachybacterium faecium DSM 4810]
 gi|256559543|gb|ACU85390.1| predicted permease [Brachybacterium faecium DSM 4810]
          Length = 267

 Score = 42.4 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 85/239 (35%), Gaps = 24/239 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L++ A+FL+G +  + G GGGL+ +P L  A               +GT+    A  +
Sbjct: 15  LALLVGAAFLAGWVDAVVG-GGGLIQLPALLTAL-----PADASTGAVLGTNKVASAAGT 68

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +S   + R            +    + +   + + S + + +L+    +  L +G   L
Sbjct: 69  AVSSWTYVRRIMPVAATAAPLVLCALLGSAAGAGLASFLPRPWLSPIVLVALLAVGAYTL 128

Query: 143 KRDRLYCERKFPDN-----YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKAT 196
            R  +    +   +           G   G   GALG G G F  + M+   G    +A+
Sbjct: 129 LRPAMGLVHEPRHSGRGHVLRSGGIGAAVGVYDGALGPGTGSFFIIAMVAVLGYGFLEAS 188

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
             +   +      ALLV    G             V      ++   ++L   L  +L+
Sbjct: 189 VHAKLANLTTNLGALLVFGLQGE------------VWWLLGAVLALANVLGGYLGARLA 235


>gi|332295776|ref|YP_004437699.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
 gi|332296409|ref|YP_004438332.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
 gi|332178879|gb|AEE14568.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
 gi|332179512|gb|AEE15201.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
          Length = 343

 Score = 42.4 bits (99), Expect = 0.066,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 45/118 (38%), Gaps = 7/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            +   + G +S + GVGGG + VP LS           +  ++  G S+  +    + + 
Sbjct: 223 FLFGIIVGFVSAVAGVGGGFLYVPFLSIVL-------GLPFYIVPGASVMAVTLGMLSTI 275

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +     G      +   +  + I   +      ++  +FL   F +  + +G+  + +
Sbjct: 276 VGWLVFGIKIAPPILIGMAGILIGAYIGPKTQKYLPMNFLYILFGVLAIYVGVGYIMK 333



 Score = 42.4 bits (99), Expect = 0.082,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 41/122 (33%), Gaps = 13/122 (10%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLV 213
            N+  +++G++ GF+S   GVGGG      +    G   Y     S     L     ++ 
Sbjct: 218 KNFGPFLFGIIVGFVSAVAGVGGGFLYVPFLSIVLGLPFYIVPGASVMAVTLGMLSTIVG 277

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            +  G  +               ++ +    ++   +  K    +   +L I F ++   
Sbjct: 278 WLVFGIKIAP-----------PILIGMA-GILIGAYIGPKTQKYLPMNFLYILFGVLAIY 325

Query: 274 TS 275
             
Sbjct: 326 VG 327


>gi|326406666|gb|ADZ63737.1| lysyl-tRNA synthetase 2 [Lactococcus lactis subsp. lactis CV56]
          Length = 921

 Score = 42.4 bits (99), Expect = 0.066,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 62/191 (32%), Gaps = 35/191 (18%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPV---LSKAFQLMGIDDSICMHVAM 71
           S   +   +    + + + G +  L        M PV   LS    L  +     +  A 
Sbjct: 28  SAKLLGHLLQFASIYALIVGIVGWL--------MPPVQKLLSGFLYLFALPTDFSIFNA- 78

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPIT-TVVTSLMISHVDKSFL---- 126
                 I    + S + HRR   + ++I+   +  +      + +     V K  L    
Sbjct: 79  ------IVLFILASSIRHRRRLALWIEIIYFQLAFVAFGLIFLLAYFFGLVTKEALDMSQ 132

Query: 127 ----NKAFAIFCLLM----GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG 178
               +  F I  +++     +LM+     +  +     + K I     GF+     +GG 
Sbjct: 133 FSIFSLLFVILGVVVSLATAVLMILSRNAFPTKIVNGTWWKGIIIAAVGFVCSI--IGG- 189

Query: 179 IFTNLLMLFYG 189
                 + F+G
Sbjct: 190 -VFVSFLTFHG 199


>gi|260774905|ref|ZP_05883806.1| predicted permease [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609160|gb|EEX35318.1| predicted permease [Vibrio coralliilyticus ATCC BAA-450]
          Length = 222

 Score = 42.4 bits (99), Expect = 0.066,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 76/221 (34%), Gaps = 18/221 (8%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            +   VA+ T         + +   H +  TI+ K+    I V  I  ++ + ++  + +
Sbjct: 10  GLPFSVALATHKVASVALGIGAAFTHIKQKTIDFKVALYVITVGSIGVIIGANIVLMIPE 69

Query: 124 SFLNKAFAIFCLLMGILM-----LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG 178
                   +  L +GI       L +  L   R         +  ++ G ++G+L  G G
Sbjct: 70  KLAETLLGLMILAIGIYSRFKRQLGQQELPTNRHTLGWIFGGLGLILIGIMNGSLTAGSG 129

Query: 179 IFTNLLML-FYGASIYKATA-TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           +   + ++ ++G S  +A A T   V              +G             +    
Sbjct: 130 LLVTIFLVRWFGYSYKQAVALTMICVGLFWNGIGGAAVAQAGAP-----------IYWPW 178

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + I+L  S L   L   LS     + + + F ++ F     
Sbjct: 179 LPILLLGSFLGGGLGAYLSTRYSNQVIKVCFELLTFAVGIK 219


>gi|116630398|ref|YP_819551.1| permease [Lactobacillus gasseri ATCC 33323]
 gi|116095980|gb|ABJ61132.1| Predicted permease [Lactobacillus gasseri ATCC 33323]
          Length = 253

 Score = 42.4 bits (99), Expect = 0.068,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 86/264 (32%), Gaps = 27/264 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
               +I    L G LS +  +   L   PVL       GI        A  T+   +  T
Sbjct: 6   LFIYLIFGGILGGLLSTIASM-ASLATYPVLLSV----GIPPVY----ANTTNDAALIWT 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            V S     +    + K +  +     I + +  +++         K         G+++
Sbjct: 57  GVGSTASSLKELKGHWKQVSFYSIFTIIGSALGCMLLIQFPGKIFEKIVPFCIAFSGLMI 116

Query: 142 LKRDRLYCERKFPDN-----YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           L    ++   +          +  +  ++ G  +G  G   G+   +++       +   
Sbjct: 117 LFSGEIHLGNESDHPNRLVQALSLLCLLIAGAYAGYFGAASGVLMLVILNAISDDDFLTV 176

Query: 197 -ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            A    + AL    AL++ +++              +   A + +   +++ +    ++ 
Sbjct: 177 NAMKNIIGALSNLVALIIYMFTEK------------IYWNAAIPLAIGALIGSYFGPRIM 224

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
             I  K + +  +++    +  FA
Sbjct: 225 RHIPVKIIRLVIAVLALIQAAYFA 248


>gi|186471013|ref|YP_001862331.1| hypothetical protein Bphy_6243 [Burkholderia phymatum STM815]
 gi|184197322|gb|ACC75285.1| protein of unknown function DUF81 [Burkholderia phymatum STM815]
          Length = 272

 Score = 42.4 bits (99), Expect = 0.070,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 43/119 (36%), Gaps = 11/119 (9%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
              G+V G +    G GG I    L+LF    ++   A +  ++ L    +  +    G 
Sbjct: 9   AALGLVVGLILALTGAGGAILAVPLLLFV---LHLNIAEATPIALLAVGVSAALGALMGL 65

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                       V   A  ++     + +P+   L++ +    LT+ F+ ++   +   
Sbjct: 66  QTRI--------VRYRAAALMAVTGTVFSPVGLWLAHRLPNGPLTLVFAGVLAYVALRM 116



 Score = 41.6 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 30/74 (40%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           M TSL VI   S    +     G +N  +   +        +   L+ S +  + L + F
Sbjct: 194 MATSLAVITLVSASGVIATAISGHMNWPVGVPFAAGALSGMLAGRLVASRLSANRLQQGF 253

Query: 131 AIFCLLMGILMLKR 144
           A+   L+ + M+ +
Sbjct: 254 ALVAGLIAVGMVAK 267



 Score = 35.4 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 77/271 (28%), Gaps = 28/271 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I        + G +  L G GG ++ VP+L     L   + +    +A+G S  +   
Sbjct: 3   HVILSSAALGLVVGLILALTGAGGAILAVPLLLFVLHLNIAEATPIALLAVGVSAAL--- 59

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                 +   +   +  +          + + V   +   +    L   FA     + + 
Sbjct: 60  ----GALMGLQTRIVRYRAAALMAVTGTVFSPVGLWLAHRLPNGPLTLVFAGVLAYVALR 115

Query: 141 MLKRDRLYCERK-----------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
           M ++  +    +                 +++W           G+G G  + LL +  G
Sbjct: 116 MFRQAAVGTPHEVRSDSALQPCRLDSGTGRFVWTAACTRALALAGIGAGFLSGLLGVGGG 175

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             I  A   +            L  I        +     G +N    +     ++    
Sbjct: 176 FVIVPALRKATNAPVPAIMATSLAVITLVSASGVIATAISGHMNWPVGVPFAAGALSG-- 233

Query: 250 LATKLSYMI-----GKKYLTIGFSMIMFTTS 275
               L+  +         L  GF+++    +
Sbjct: 234 ---MLAGRLVASRLSANRLQQGFALVAGLIA 261


>gi|150017375|ref|YP_001309629.1| membrane protein, permease [Clostridium beijerinckii NCIMB 8052]
 gi|149903840|gb|ABR34673.1| conserved membrane protein, predicted permease [Clostridium
           beijerinckii NCIMB 8052]
          Length = 120

 Score = 42.4 bits (99), Expect = 0.071,   Method: Composition-based stats.
 Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 8/111 (7%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA-PTSVMSFMEHRRHGT 94
           LSGLFG+GGG++++P L                 A GTSL  +  P  +++FME+ + G 
Sbjct: 17  LSGLFGIGGGIIIIPALMYL-------KGFSQLTAQGTSLVAMLPPVGLLAFMEYYKKGN 69

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            N+         + I+      + + +  S + KAF IF +L+GI      
Sbjct: 70  TNITAGIIICVTMLISAKFGGQLANILPASIMKKAFGIFIILVGIKTFIGK 120


>gi|327400300|ref|YP_004341139.1| hypothetical protein Arcve_0391 [Archaeoglobus veneficus SNP6]
 gi|327315808|gb|AEA46424.1| protein of unknown function DUF81 [Archaeoglobus veneficus SNP6]
          Length = 331

 Score = 42.4 bits (99), Expect = 0.073,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 45/117 (38%), Gaps = 7/117 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L +      G ++G+FG+G G   VPVL+           + +  ++ TS+ +++   
Sbjct: 206 LPLAMAVFAGVGFIAGMFGLGAGWANVPVLNLLM-------GVPLKASVATSMLILSIND 258

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S   +  +G +   I+   +  + I + + S +        +         L  I
Sbjct: 259 AASLWVYLANGAVLPLIVVPVVLGIGIGSRIGSRIAVRAKPKVIKYLVISLIGLSAI 315


>gi|124022498|ref|YP_001016805.1| hypothetical protein P9303_07891 [Prochlorococcus marinus str. MIT
           9303]
 gi|123962784|gb|ABM77540.1| Domain of unknown function DUF81 [Prochlorococcus marinus str. MIT
           9303]
          Length = 255

 Score = 42.4 bits (99), Expect = 0.073,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 65/174 (37%), Gaps = 9/174 (5%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
               MG+      H A+ TS   I PT++   + H   G   ++          +++++ 
Sbjct: 34  LLLWMGLSP----HQALATSTFAIVPTALSGTLTHLFAGGFQLRAGLSIGVAAFLSSLLF 89

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN---YVKYIWGMVTGFLSG 171
           S +   V   FL        L++    ++ +     ++           + G V GF +G
Sbjct: 90  SKIGLDVSGWFLLTLQVGLYLVVAA-TIRSEPHQAGQQLKSTLFLPGLAVVGSVAGFSAG 148

Query: 172 ALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            LG+GGG+    LM+      I+ A   S       A  A L  +  G G  G+
Sbjct: 149 LLGLGGGLLMVPLMVNGLAVPIHLAIRLSTLAVTCSATAASLQFLSEGRGSAGI 202


>gi|325968130|ref|YP_004244322.1| hypothetical protein VMUT_0609 [Vulcanisaeta moutnovskia 768-28]
 gi|323707333|gb|ADY00820.1| hypothetical protein VMUT_0609 [Vulcanisaeta moutnovskia 768-28]
          Length = 280

 Score = 42.4 bits (99), Expect = 0.073,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 94/279 (33%), Gaps = 46/279 (16%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +A+ +   ++   G+ G  +++P+ S     +         V   T+L     +  +S
Sbjct: 11  LFIAALIISFITSQGGISGAYLLLPIQSYILNTVN-------PVISSTNLLYNLISIPLS 63

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--DKSFLNKAFAIFCLLMGILMLK 143
              + R   I M      I      TVV + +  H   D    +         +   ++ 
Sbjct: 64  IHAYIRERRIAMPFALILIMGASAGTVVGTWLREHYLTDGYAFSCFMGFVLFSLAAELIL 123

Query: 144 RDRLYCERKF-------------------------PDNYVKYIWGMVTGFLSGALGVGGG 178
                 +                             +  +  I  ++ G +SGA G+GG 
Sbjct: 124 NSLFVRQIHTYESVIRCSRDGSSLVIITNKGNAYRVNTALLVIITVLVGIVSGAYGIGGA 183

Query: 179 IFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
              + +++   G   Y  +  +  V+ +++   +L   Y G+  + +   S+G   +G +
Sbjct: 184 SILSPILIGPMGLPTYIISGPTLVVTLVVSLIGILSYTYLGYPPDIINGLSIG---LGGM 240

Query: 238 LIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           + I   +I            + ++++ +  + +    S 
Sbjct: 241 IGIYLGTI--------TQRRLSERFIKLIVAAVTIIMSL 271


>gi|126725078|ref|ZP_01740921.1| hypothetical protein RB2150_14621 [Rhodobacterales bacterium
           HTCC2150]
 gi|126706242|gb|EBA05332.1| hypothetical protein RB2150_14621 [Rhodobacterales bacterium
           HTCC2150]
          Length = 249

 Score = 42.4 bits (99), Expect = 0.073,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 79/258 (30%), Gaps = 21/258 (8%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +    I A+  +G   G FG G   V   +L+   +           +A+G  L ++  
Sbjct: 6   TFFAFAIPATIFAGISKGGFGSGAAFVASAILALILE---------PTIALGIMLPLLMF 56

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF-CLLMGI 139
             V +       G  +    K  +       ++ +   S V+   +         + +  
Sbjct: 57  ADVAALKPFW--GKWHTPSAKTIMIGALPGVILGAFFFSMVNDQAIRLLLGAICLIFVAY 114

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            + +          P    +     +TG  S  +   GG    + +L  G S     AT+
Sbjct: 115 QLARHLGYLSVAPRPFKAREGYLAGLTGGFSSFVSHAGGPPVAVFLLAQGMSKTAYQATT 174

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                LI     +   + G                 AV+ + P ++L   +  K  +MI 
Sbjct: 175 VLCFWLINILKFVPYAFLGIFSGET---------FLAVVFLAPFAVLGAYIGIKAHWMIP 225

Query: 260 KKYLTIGFSMIMFTTSFV 277
           ++        ++  T   
Sbjct: 226 ERLFFTITYALLAVTGLR 243


>gi|330814366|ref|YP_004358605.1| hypothetical protein SAR11G3_01391 [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327487461|gb|AEA81866.1| hypothetical protein SAR11G3_01391 [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 248

 Score = 42.4 bits (99), Expect = 0.074,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 75/254 (29%), Gaps = 30/254 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+I  S L   +S   G+GGGL+M+  LS     M +                I     
Sbjct: 16  VLMITVSLLCSFISAAAGIGGGLMMLAFLSALLPPMYLVPIHG-----------IIQFGS 64

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
             F        IN + +  ++    I + +   + +++  ++L    A F L        
Sbjct: 65  NFFRATLSFKEINKQAVIPFVIGCLIGSTMGGFIFTNLPTNYLKFGIAFFILW------- 117

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
              ++ +     + +    G +   +S   G   G     ++           AT   + 
Sbjct: 118 --SVFGKVPAIKSKLLLPIGFLVSLISMLFGA-SGFIMVAVVKSMKLPPVNHVATHGAMM 174

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
                   ++    G+                 V+ ++      T +  K     G+ Y 
Sbjct: 175 TFQHLIKSIIFGIFGFSFAS---------YAPLVVAMIIGGFFGTYIGKKFLISKGQYYF 225

Query: 264 TIGFSMIMFTTSFV 277
               ++ +   +  
Sbjct: 226 KTVLNLFLIFAAIR 239


>gi|291533702|emb|CBL06815.1| Predicted permeases [Megamonas hypermegale ART12/1]
          Length = 156

 Score = 42.4 bits (99), Expect = 0.074,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 51/128 (39%), Gaps = 3/128 (2%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I ++ V     GT   L G+GGGL+M+P+ + A        +  +   +GTSL  +   +
Sbjct: 4   ILVLFVVGIGVGTFGTLIGIGGGLIMIPLFTFALTPSIFHSAPEI---VGTSLFGVFLNA 60

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +     + +   +  K    +        ++ SL+  +      + ++ IF L++  +M 
Sbjct: 61  LSGTYAYVKQHRVYFKAAIPFAIATLPGAILGSLVSDYFTGPTFSLSYGIFILIISAIMY 120

Query: 143 KRDRLYCE 150
                   
Sbjct: 121 WNSSNKKA 128


>gi|47059358|gb|AAT09366.1| predicted permease [Corynebacterium glutamicum]
          Length = 206

 Score = 42.4 bits (99), Expect = 0.074,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 81/196 (41%), Gaps = 19/196 (9%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++I  + ++G +  + G GGGLV++P++            +    A+ ++       +  
Sbjct: 18  ILIAGAAVAGWIDAVIG-GGGLVLIPLILAVM------PQLAPVTALASNKLAAVTGTAS 70

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +     R    + K+L  ++ V  + +   +L  S +DK  +     +  L++G++++ +
Sbjct: 71  AAFTLVRRVKPDKKLLALYVLVAAVCSGAGALAASLIDKQIMRPLIIVLMLVVGLIVVFK 130

Query: 145 DRLYC--ERKFPDNYVKYIWGMVTGFLS---GALGVGGGIFTNLLML-------FYGASI 192
                   +  P  + ++   +  G ++   G  G G G+F  +             A++
Sbjct: 131 PNFGTGESKALPTGWKRWAAIVAVGLIAAYDGIFGPGTGMFLIMAFTALLSQNFLSSAAM 190

Query: 193 YKATATSAGVSALIAF 208
            K   T+  + ALI F
Sbjct: 191 AKVVNTATNLGALIVF 206


>gi|281491613|ref|YP_003353593.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281375331|gb|ADA64844.1| Lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 921

 Score = 42.4 bits (99), Expect = 0.075,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 62/191 (32%), Gaps = 35/191 (18%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPV---LSKAFQLMGIDDSICMHVAM 71
           S   +   +    + + + G +  L        M PV   LS    L  +     +  A 
Sbjct: 28  SAKLLGHLLQFASIYALIVGIVGWL--------MPPVQKLLSGFLYLFALPTDFSIFNA- 78

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPIT-TVVTSLMISHVDKSFL---- 126
                 I    + S + HRR   + ++I+   +  +      + +     V K  L    
Sbjct: 79  ------IVLFILASSIRHRRRLALWIEIIYFQLAFVAFGLIFLLAYFFGLVTKEALDMSQ 132

Query: 127 ----NKAFAIFCLLM----GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG 178
               +  F I  +++     +LM+     +  +     + K I     GF+     +GG 
Sbjct: 133 FSIFSLLFVILGVVVSLATAVLMILSRNAFPTKIVNGTWWKGIIIAAVGFVCSI--IGG- 189

Query: 179 IFTNLLMLFYG 189
                 + F+G
Sbjct: 190 -VIVSFLTFHG 199


>gi|306834879|ref|ZP_07467937.1| permease [Corynebacterium accolens ATCC 49726]
 gi|304569231|gb|EFM44738.1| permease [Corynebacterium accolens ATCC 49726]
          Length = 256

 Score = 42.4 bits (99), Expect = 0.075,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 91/262 (34%), Gaps = 25/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++++ +  +G +  + G GGGLV++P+L            +    A+ T+       + 
Sbjct: 9   AVLLMGAAGAGWIDAVIG-GGGLVLIPLLLAVV------PGLAPATALATNKLAAVSGTA 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + +   R        L  +  +  +   + + + ++++   +     +  +++G+ +  
Sbjct: 62  SAAVTLVRRVRPPAGELVRYALIALVCAGLGASVAANLNSDIMRPLIIVLLVVVGVFVTF 121

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLS-----GALGVGGGIFTNLLMLF-YGASIYKATA 197
           +                 W  +    S     G  G G G+F  +   F +  +  K+ A
Sbjct: 122 KPSFGTTESPGIRGGWRTWAGIVAVASISFYDGIFGPGTGMFLIMAFTFIFSQNFLKSAA 181

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  V+      AL+  I  G        W+LG       + +   +IL   +  +    
Sbjct: 182 MAKVVNTATNLGALVTFILGG-----HVWWTLG-------IALAAANILGAQVGARTVLS 229

Query: 258 IGKKYLTIGFSMIMFTTSFVFA 279
            G K +      ++   S   +
Sbjct: 230 GGTKLIRYALLTLVVVMSCYLS 251


>gi|323142924|ref|ZP_08077635.1| hypothetical protein HMPREF9444_00242 [Succinatimonas hippei YIT
           12066]
 gi|322417352|gb|EFY07975.1| hypothetical protein HMPREF9444_00242 [Succinatimonas hippei YIT
           12066]
          Length = 257

 Score = 42.4 bits (99), Expect = 0.076,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 90/263 (34%), Gaps = 29/263 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++   SF++   + + G G G V  P+L            +    A+GT    +    V
Sbjct: 9   IILFSVSFIANLFASVSGGGAGFVQFPLLILM--------GLPFAEALGTHKVAVIFLGV 60

Query: 84  MSFMEH---RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            +  +         ++ +I    +F+     V  +L++  V       A  I  +  G  
Sbjct: 61  GALSKKKSEHGKFNLDRQIALLMLFIGCPAVVAGTLIVISVPSQIAEIAVGIITIAAGFY 120

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMV----TGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
              + +         + ++ + G +     G  SG+L  G G+F  L  +  +   +  A
Sbjct: 121 TFFKKQFGSNANPERSKLRVLAGTLAIIAVGLFSGSLSSGAGLFATLTFVSIFRLDLKSA 180

Query: 196 TA-TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
              T   V+ +      +               S+  ++   V +++  + L +   T L
Sbjct: 181 ILHTMVFVATIWNIVGAIT------------VGSVTAIHWAWVPVLIAATFLGSFAGTTL 228

Query: 255 SYMIGKKYLTIGFSMIMFTTSFV 277
              +  K + + FS +   +  +
Sbjct: 229 LIKLPVKIVRLVFSCVAIMSGII 251


>gi|153870944|ref|ZP_02000236.1| Permease [Beggiatoa sp. PS]
 gi|152072592|gb|EDN69766.1| Permease [Beggiatoa sp. PS]
          Length = 302

 Score = 42.4 bits (99), Expect = 0.077,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 89/246 (36%), Gaps = 29/246 (11%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I +       ++G    GGG V  PV +K  Q+  +D  I        SL + +     +
Sbjct: 21  ISLTMIFGSFIAGGTSEGGGAVAFPVFTKLLQISPMDAKIF-------SLAIQSVGMTAA 73

Query: 86  FMEHRRHG-TINMKILKDWIFVLPITTVVTS-LMISHVDKSFLNKAFAIFCLLMGI--LM 141
            +     G  +  ++++       +  V++S L+   +    L  +F        I   +
Sbjct: 74  SLVIVYMGIKVEWRVIRWASLGGLLGIVLSSLLLAPILSAPILKMSFTAMITSFAITLFV 133

Query: 142 LKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKA 195
           L R++ +C  + P        +    G + G +SG +G G  I T   M L +      A
Sbjct: 134 LNRNQRFCHIRLPTFGTYERTLFLGAGFLGGMMSGLVGNGIDIITFSFMVLLFHLDEKIA 193

Query: 196 TATSAGVSALIAFPALL--VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           T TS  + A+ A         I  G+ L     W          L  +P+ ++  P    
Sbjct: 194 TPTSVILMAINALIGFALHFFIIGGFTLEVQAWW----------LAAIPVVVVGAPAGAM 243

Query: 254 LSYMIG 259
           +  ++ 
Sbjct: 244 ICSLLD 249


>gi|39936622|ref|NP_948898.1| hypothetical protein RPA3560 [Rhodopseudomonas palustris CGA009]
 gi|39650478|emb|CAE29001.1| DUF81 [Rhodopseudomonas palustris CGA009]
          Length = 261

 Score = 42.4 bits (99), Expect = 0.077,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 12/126 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   +VA F  G ++ L GV GG +++P L   F          + +A   SL V  PT 
Sbjct: 140 IIAGLVAGFAIGVVASLLGVAGGELLIPTLVLLFGAD-------IKLAGSLSLAVSLPTM 192

Query: 83  VMSFMEHRRHGTI-----NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           ++ F  + R  +      N   +        + +++ SL++  +  + L    A   +L 
Sbjct: 193 IVGFTRYSRDQSFSVLDQNRSFVLVMAAGSIVGSLIGSLLLGVIPGAALLPFLAALLVLS 252

Query: 138 GILMLK 143
            I + +
Sbjct: 253 AIKVWR 258



 Score = 38.5 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 5/126 (3%)

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
             +  ++ + +    I     +   + +  + L +  AI  +++ +++L        +  
Sbjct: 74  AAHWTVVVNLLGGSLIGAWFGAGWATRLKSASLYRVIAILLVVIALVLLWGHGAAGSQPV 133

Query: 154 PDNYVKYIWGMV----TGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAF 208
                + I G+V     G ++  LGV GG +    L+L +GA I  A + S  VS     
Sbjct: 134 LSGTSQIIAGLVAGFAIGVVASLLGVAGGELLIPTLVLLFGADIKLAGSLSLAVSLPTMI 193

Query: 209 PALLVR 214
                 
Sbjct: 194 VGFTRY 199


>gi|152994221|ref|YP_001339056.1| hypothetical protein Mmwyl1_0179 [Marinomonas sp. MWYL1]
 gi|150835145|gb|ABR69121.1| protein of unknown function DUF81 [Marinomonas sp. MWYL1]
          Length = 240

 Score = 42.4 bits (99), Expect = 0.077,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 81/224 (36%), Gaps = 21/224 (9%)

Query: 27  IVASFLSGTLSGL--FGVGG-GLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           IV  FL+G ++G   F VGG GL+++P+L  AF             A+   L +   T +
Sbjct: 5   IVVLFLAGLITGFSKFSVGGMGLLVLPILLVAFPG---------PEALAVLLPLYIITDI 55

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M+   +R    +N  +L  ++ +  +   V S  ++++D       F  F ++  I +  
Sbjct: 56  MAVWSYRSK--VNWSVLVRFLPLAFLGVFVASHFLANIDGEQF-INFLGFMIIAMIALGL 112

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
                        +  Y  G + G +   +    G   +L +L          +T A   
Sbjct: 113 YLDFRPATFMQKPWAAYSMGFLGGIV-TMMANAAGPLFSLFLLEQKLDKETYVSTRAWAF 171

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
            +I    L   I  G             V++  +  +   S + 
Sbjct: 172 FIINVAKLPFYIALGLFSLESVQ-----VSLYGLPGLAIGSFIG 210


>gi|224014498|ref|XP_002296911.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220968291|gb|EED86639.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 516

 Score = 42.4 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 8/60 (13%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
                +F++G ++GL G+GGG+V+ P++     +MG+  S    VA  T+  ++  TS  
Sbjct: 451 FYSFFTFVAGIVAGLIGIGGGMVLGPLMM----VMGVHPS----VATATTATMVVLTSSS 502



 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 30/54 (55%)

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
           +  V G ++G +G+GGG+    LM+  G     ATAT+A +  L +    ++RI
Sbjct: 455 FTFVAGIVAGLIGIGGGMVLGPLMMVMGVHPSVATATTATMVVLTSSSVAVIRI 508


>gi|86748610|ref|YP_485106.1| hypothetical protein RPB_1485 [Rhodopseudomonas palustris HaA2]
 gi|86571638|gb|ABD06195.1| Protein of unknown function DUF81 [Rhodopseudomonas palustris HaA2]
          Length = 255

 Score = 42.4 bits (99), Expect = 0.080,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 71/197 (36%), Gaps = 17/197 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAF-QLMGIDDSICMHVAMGTSLGVIAPT 81
           I +I++A    G + G  G G  L  +P+L+        +     +  A+G         
Sbjct: 10  IAVILIAGLFGGFVRGYSGFGFALAAMPILTLVLSPAAAVPSVFPLECAIG-------LL 62

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ S   H     +++++LK       + T V   +++ V    +     +   +     
Sbjct: 63  TLPSEWRH-----VDLRVLKWLALGAVVGTPVGLSVLTLVPAEIMRLLLGLAVAVAAFRA 117

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
            + +R     + P+       G ++G L+G+  + G      L+      +  A AT   
Sbjct: 118 WRGERDVLATRAPN---LAAIGFLSGCLNGSTAMSGPPVIVSLL-GSNMPMLSARATLIA 173

Query: 202 VSALIAFPALLVRIYSG 218
             A+ A   + +    G
Sbjct: 174 FIAMSAGFGIALSAARG 190


>gi|218778871|ref|YP_002430189.1| hypothetical protein Dalk_1018 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760255|gb|ACL02721.1| protein of unknown function DUF81 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 299

 Score = 42.4 bits (99), Expect = 0.081,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 75/208 (36%), Gaps = 19/208 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             L+ +   + GT+    G+G G++ +PVL+           I    A+  S+       
Sbjct: 43  FILVHLLGVVVGTMVMFTGLGAGMLWIPVLTVL--------HIRPSEAVSISIFTQIAGK 94

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               + +   G +++KI   +I +  I   +  +    + + +      IF L+ G L++
Sbjct: 95  GAGSLSYLISGKVDLKIAARFIPMALIGVTIGYIAGYFIPQEYERVLLYIFLLVAGYLLM 154

Query: 143 K----------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGAS 191
           +          +  L    + P     +     + F +G L +G   +    M       
Sbjct: 155 QMIQSLNEPEEKKSLRSPEQSPFLTKSWPLVAASSFFTGLLSIGNTDWIIPHMEQKLNLP 214

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGW 219
            +KA AT   +  +     LL+   S W
Sbjct: 215 TWKAVATGLFIMFITILFYLLLVCISVW 242


>gi|332703601|ref|ZP_08423689.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332553750|gb|EGJ50794.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 331

 Score = 42.4 bits (99), Expect = 0.082,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 43/114 (37%), Gaps = 7/114 (6%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
            + G ++G+FG+G G   VPVL+             + VA+GTS  +++ T   +   + 
Sbjct: 221 IIIGIMAGMFGLGAGWANVPVLNILMGA-------PLKVAVGTSKFLLSITDTSAAWVYL 273

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
             G +   +    I  L + +     +++      +           G   L +
Sbjct: 274 NQGCVIPLMAIPSIVGLMLGSFTGVRILAVAKPKMIRYLVIGVLFFAGGKALLK 327



 Score = 38.1 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 79/224 (35%), Gaps = 36/224 (16%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++   F  G ++ L GVGGG++ VP++S  F          +    G  L V    ++
Sbjct: 60  AILLFFCFGLGVIAVLAGVGGGVLYVPLVSGFFPF-------HLDFVRGAGLLVALAGAL 112

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +     +    ++++      +     +V +++   +  + +  A     L + +L+L 
Sbjct: 113 AAGPGLLKRNLASLRLALPVALIASSCAIVGAMIGLALPTNIVQIALGTTILFIAVLLLT 172

Query: 144 RDRLYCERKFPDNYVKYIWG----------------------------MVTGFLSGALGV 175
              +        + V    G                            ++ G ++G  G+
Sbjct: 173 SKNVIRPVVTKQDAVGAALGLNGVYFDASTGENIDWKTHRTLPGLLMFIIIGIMAGMFGL 232

Query: 176 GGGIFTNLLM-LFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           G G     ++ +  GA +  A  TS  + ++    A  V +  G
Sbjct: 233 GAGWANVPVLNILMGAPLKVAVGTSKFLLSITDTSAAWVYLNQG 276


>gi|325263706|ref|ZP_08130439.1| putative membrane protein [Clostridium sp. D5]
 gi|324030744|gb|EGB92026.1| putative membrane protein [Clostridium sp. D5]
          Length = 260

 Score = 42.4 bits (99), Expect = 0.082,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 52/163 (31%), Gaps = 7/163 (4%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             +  H+A+ T+       + ++     ++G ++ ++    +      + + + +   V 
Sbjct: 46  AGLPPHMAVATNKMSSTCGTSLATFRFIKNGLVSFRLALPSVAAAIAGSFIGAHISMVVP 105

Query: 123 KSFLNKAFAIFCLLMGILMLKRD------RLYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
           +  +         +   L+L +                          + G   G  G G
Sbjct: 106 EKIMLYVLIGILPVSAFLVLNKKLFHDNGSDSVTLDKRTYITAVTAAFIIGIYDGFYGPG 165

Query: 177 -GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            G        +F   SI  A A +  ++      +L++ + +G
Sbjct: 166 TGTFLIIAFTVFAKLSIKTANAQAKVINLTTNITSLIIFLLNG 208


>gi|288870847|ref|ZP_06115492.2| putative transport protein [Clostridium hathewayi DSM 13479]
 gi|288865707|gb|EFC98005.1| putative transport protein [Clostridium hathewayi DSM 13479]
          Length = 243

 Score = 42.4 bits (99), Expect = 0.082,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 91/259 (35%), Gaps = 25/259 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + +++ +SF  G +  + G GG ++++  L              M  A   S  +  
Sbjct: 1   MEQVLIVVFSSFCGGLVQAVTGFGGAVIIMIFLPLILN---------MTAAPALSDVITM 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S   F  +R+  ++  K +     V  I++ +     + +D   L   F +F +++ +
Sbjct: 52  TLSFSMFWRYRK--SVRFKSIVIPAAVYLISSTLAIHGSAFIDAGKLKGVFGVFLIILSV 109

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
                      +  P  ++K+  G + G   G  G+ G   +   +        +   T 
Sbjct: 110 YFFGFSGKLSVK--PTLFMKFGCGALAGICGGLFGISGPPVSLFYLAATDTK-EEYLGTL 166

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT-PLATKLSYMI 258
               +      L+ RIY+G+    L P          ++ +   +IL    L +++   I
Sbjct: 167 NAFFSFTVIFNLISRIYNGFLTVSLVP----------LMGVGIAAILTGCVLGSRIVKKI 216

Query: 259 GKKYLTIGFSMIMFTTSFV 277
               +       M     V
Sbjct: 217 NIDVMRKCVYGFMAFAGMV 235


>gi|240139163|ref|YP_002963638.1| hypothetical protein MexAM1_META1p2585 [Methylobacterium extorquens
           AM1]
 gi|240009135|gb|ACS40361.1| conserved membrane hypothetical protein, DUF81 [Methylobacterium
           extorquens AM1]
          Length = 267

 Score = 42.4 bits (99), Expect = 0.082,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 90/241 (37%), Gaps = 25/241 (10%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP+L+ A  +         HVA+GTS   ++ ++  + +   R G +  +    +  
Sbjct: 30  ILAVPLLTYAVGV------NSPHVAIGTSALAVSVSAAGNLVPQWRAGNVKWRCAGAFSL 83

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF----PDNYVKYI 161
              +  +  S     VD   L   F    L +G LML+R R   +           V   
Sbjct: 84  AGVLGALAGSAAARAVDGQSLLALFGFVMLAVGGLMLRRRRGEGDPDVRLTKRSAPVLLP 143

Query: 162 WGMVTGFL-----SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           W +  GF            GG +    LML     +  A  TS     L+A  A      
Sbjct: 144 WLLGIGFAVGLFSGFFGIGGGFLIVPGLMLATSMPLPMAIGTS-----LVAVSAFGAATA 198

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           + + ++GL  W+L       +L      ++ + L  +L+    K+ LTI F+ +M     
Sbjct: 199 ASYAVSGLIDWTLA---GLFILGGALGGLVGSRLGQRLAGH--KRALTITFAGLMILVGL 253

Query: 277 V 277
            
Sbjct: 254 Y 254


>gi|300712299|ref|YP_003738113.1| hypothetical protein HacjB3_14710 [Halalkalicoccus jeotgali B3]
 gi|299125982|gb|ADJ16321.1| hypothetical protein HacjB3_14710 [Halalkalicoccus jeotgali B3]
          Length = 255

 Score = 42.4 bits (99), Expect = 0.083,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 96/267 (35%), Gaps = 32/267 (11%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +   L+ V +  +G      G GG  V V  L     L   + +       GT+      
Sbjct: 4   ELAVLLAVIALFAGVGITAIGPGGVFVTV-ALFALAPLSTAEVA-------GTASATFVA 55

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA----IFCLL 136
           T ++    + + G       ++   VL  T+V+ +L  S ++     + F     +F   
Sbjct: 56  TGLLGSAVYFQSGEFAQGHAREMAIVLSATSVLGALAGSQLNLVLPERVFGYLLSVFVTT 115

Query: 137 MGILMLKRDRLYCERKFP--------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           +G +++ R+ +  +               +    G+  G L G LGVGG +    +++  
Sbjct: 116 IGAVIVYREHVGLKPSNRLDSVPDRQRRVLIGGVGLGIGILGGLLGVGGPVVAVPVLVVL 175

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
           G  +  A A +   S  I+  A      S            G V+I   ++I    ++  
Sbjct: 176 GVPMLVAVAVAQVQSVFISTFATAGYALS------------GAVSIPVAVLIGIPQLVGV 223

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTS 275
               K+++++    L I    ++ T  
Sbjct: 224 LAGWKVAHLVDPHRLRIVLGAVLVTVG 250


>gi|86157393|ref|YP_464178.1| hypothetical protein Adeh_0966 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85773904|gb|ABC80741.1| protein of unknown function DUF81 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 254

 Score = 42.0 bits (98), Expect = 0.086,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 70/198 (35%), Gaps = 14/198 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +   + L+G +  + G GGGL+ +P L            +  H+A+GT+ G     S  +
Sbjct: 12  LTAVALLAGVVDAIAG-GGGLLTLPALLW--------TGLPPHLALGTNKGQSVFGSFAA 62

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN----KAFAIFCLLMGILM 141
            +   R G ++ +  +    +    ++  + ++  V  + L        A   L +G+  
Sbjct: 63  LVRFSRAGMVDGRRARLTFPLGLAGSLAGAGLVLLVPPATLRPVVLALLAFAALFVGLRR 122

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSA 200
               R     +     V     +  G   G  G G G       +   G  +  A+A + 
Sbjct: 123 GPPARPDGGPRPAAPVVAGAIALAIGAYDGFFGPGTGTFLIVAFVALLGDGLAHASAGAK 182

Query: 201 GVSALIAFPALLVRIYSG 218
            V+      A+ +    G
Sbjct: 183 VVNFASNLAAVTLFSIKG 200


>gi|315037569|ref|YP_004031137.1| integral membrane protein [Lactobacillus amylovorus GRL 1112]
 gi|312275702|gb|ADQ58342.1| putative integral membrane protein [Lactobacillus amylovorus GRL
           1112]
          Length = 252

 Score = 42.0 bits (98), Expect = 0.087,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 75/231 (32%), Gaps = 21/231 (9%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +GI        A  T+   +  TS+ S +   +    + K    +     + ++
Sbjct: 31  YPVLLAVGIPPVY----ANVTNDAALIWTSIGSTISSTKELKGHWKETWFFTIFTVLGSI 86

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC--ERKFPDNYVKYIWGM--VTGF 168
           V  +++     S   KA   F    GI++L   +       K P        G   + G 
Sbjct: 87  VGCILLLSFPSSVFEKAVPFFIAFSGIMILVSGKHNTLNTEKQPTWLRIVYLGTLLIMGA 146

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKAT-ATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +G  G  GG+   +++ +     +    A    +S      AL++ +++          
Sbjct: 147 YTGYFGAAGGVIVLVILTYITNEKFIVINAIKNVISGFANLVALIIFMFTS--------- 197

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               +     + +     +   +   +   + +K + I  + + F  S  F
Sbjct: 198 ---HIYWLQAIPLAIGMFIGGYIGPAILRRVPEKPVRIFIATLAFVQSAYF 245


>gi|256829372|ref|YP_003158100.1| hypothetical protein Dbac_1591 [Desulfomicrobium baculatum DSM
           4028]
 gi|256578548|gb|ACU89684.1| protein of unknown function DUF81 [Desulfomicrobium baculatum DSM
           4028]
          Length = 247

 Score = 42.0 bits (98), Expect = 0.087,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 89/262 (33%), Gaps = 23/262 (8%)

Query: 18  CVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV 77
            +     + I    L G ++G+ G G  LV +P+         +   + M +A+ T   V
Sbjct: 2   DIAALYLVTIFGWLLGGFVNGIVGFGAALVAMPI---------VATGLDMPLAVSTCGLV 52

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +   +      +R+H  ++   +K          +   L++ +V ++ L   F +  LL+
Sbjct: 53  VLSLNFQMAWNYRKH--LDSCGIKALFLGGLPGAICGVLVLKNVPEAGLK--FGLGALLI 108

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
              +          +     +   WGM+ GFLS  LG   G     L ++          
Sbjct: 109 AYSIWG----LSGTQVNKRKLAAPWGMLAGFLSTGLGTAFGFNGPPLAVYLSLRGGTQQQ 164

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
             A + A      L   I +   L GL      ++ I A+  +     L      ++S  
Sbjct: 165 IKAALGAFFIVSGL--FIVAAHALAGLYSVHALWLYIAALPSVS----LGAWAGMRVSGR 218

Query: 258 IGKKYLTIGFSMIMFTTSFVFA 279
           +          +++       A
Sbjct: 219 LQDLSFQRVLFLMILIMGLSMA 240


>gi|300703828|ref|YP_003745430.1| hypothetical protein RCFBP_11519 [Ralstonia solanacearum CFBP2957]
 gi|299071491|emb|CBJ42813.1| conserved membrane protein of unknown function, DUF81 [Ralstonia
           solanacearum CFBP2957]
          Length = 273

 Score = 42.0 bits (98), Expect = 0.087,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 30/81 (37%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + M   + TSL VIA  S    +     G ++ +I   +        +       H+  
Sbjct: 190 DLPMQTIVATSLAVIALVSAGGVVASAIGGHVDWQIAVPFGAGALAGMLAGRGFARHLAG 249

Query: 124 SFLNKAFAIFCLLMGILMLKR 144
             L + FA F  ++ I +  R
Sbjct: 250 PALQQGFAAFAAMVAIGLALR 270



 Score = 42.0 bits (98), Expect = 0.094,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 7/117 (5%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G +  L G GG +V VP+L     L     +    +A+G S G+ A   +      
Sbjct: 15  GSAVGLILALTGAGGAIVAVPLLIFGLHLSVSQAAPVALLAVGLSAGLGAALGL------ 68

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
            R G +  K          + + +       V  + L   FA+    + + M  + R
Sbjct: 69  -REGKVRYKAAALMALCGVLLSPLGVWAAQRVPNTPLTLLFAVVLAYVAVRMFLQAR 124



 Score = 38.1 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 45/124 (36%), Gaps = 11/124 (8%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
                   G   G +    G GG I    L++F    ++ + + +A V+ L    +  + 
Sbjct: 7   GWLASAGLGSAVGLILALTGAGGAIVAVPLLIF---GLHLSVSQAAPVALLAVGLSAGLG 63

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
              G           G V   A  ++    +L++PL    +  +    LT+ F++++   
Sbjct: 64  AALGLRE--------GKVRYKAAALMALCGVLLSPLGVWAAQRVPNTPLTLLFAVVLAYV 115

Query: 275 SFVF 278
           +   
Sbjct: 116 AVRM 119


>gi|254559319|ref|YP_003066414.1| hypothetical protein METDI0725 [Methylobacterium extorquens DM4]
 gi|254266597|emb|CAX22367.1| conserved membrane protein precursor of unknown function, DUF81
           [Methylobacterium extorquens DM4]
          Length = 269

 Score = 42.0 bits (98), Expect = 0.087,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 78/240 (32%), Gaps = 29/240 (12%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP+L+    +         HVA+GTS   ++ ++  + +   R G +  +    +     
Sbjct: 34  VPLLTYVVGVS------SPHVALGTSALAVSVSAAGNLIPQARAGHVKWRCAATFSLAGV 87

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK------RDRLYCERKFPDNYVKYIW 162
                 +     VD   L   F +  L++G LML+         +    +     + ++ 
Sbjct: 88  AGAFAGAAAAKAVDGQKLLALFGVVMLVVGGLMLRERHGGGDPNVRLTARTAPRLLPWLL 147

Query: 163 GMVTGF---LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           G+  G           GG +    L+L  G  +  A  TS    +            SG 
Sbjct: 148 GIGFGVGLFSGFFGIGGGFLIVPGLILATGMPLTSAIGTSLVAVSAFGAATATSYAVSGQ 207

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG--KKYLTIGFSMIMFTTSFV 277
                       ++     + +   +L      +L   +   K+ LT+ F+ ++      
Sbjct: 208 ------------IDWPLAGLFILGGVLGGLAGARLGQRLAGRKRALTVTFAGLVILVGLY 255


>gi|72162977|ref|YP_290634.1| hypothetical protein Tfu_2578 [Thermobifida fusca YX]
 gi|71916709|gb|AAZ56611.1| conserved hypothetical protein [Thermobifida fusca YX]
          Length = 264

 Score = 42.0 bits (98), Expect = 0.087,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 85/242 (35%), Gaps = 26/242 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V+ I L++ A+  +G +  + G GGGL+M+P L  AF       +  +   +GT+     
Sbjct: 3   VEIIALLMAAAVAAGWVDAVVG-GGGLLMLPALLVAF------PTTPVAAVLGTNKLTAI 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  + + + R       ++     +  +     + +   V  + L        L + +
Sbjct: 56  FGTCSAAITYARGVKSEPHVVWSAAGLALLGAGSGAALAGAVSSATLRPIIMAVLLAVAV 115

Query: 140 L------MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASI 192
                  M +  +              I G+V G   G +G G G F  + +    G   
Sbjct: 116 FVVLRPAMGRVAQPRLRTPARVVATVLITGLVIGCYDGLIGPGTGTFLIIALTSIIGMDF 175

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A+A++  ++      A++V   +            G V     L +   +I    +  
Sbjct: 176 VTASASAKIINTATNLGAIIVFALN------------GDVMWLIGLGLAVCNIAGAQVGA 223

Query: 253 KL 254
           ++
Sbjct: 224 RM 225


>gi|289677658|ref|ZP_06498548.1| hypothetical protein PsyrpsF_30511 [Pseudomonas syringae pv.
           syringae FF5]
          Length = 92

 Score = 42.0 bits (98), Expect = 0.088,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 34/84 (40%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             + M   + TSL VIA  S+ S +     G ++  +   +     I  V+   +  ++ 
Sbjct: 9   SDLDMKSVVATSLAVIALVSMGSVITASLSGVMHWAVGAPFALGAVIGLVIGRQVARYLA 68

Query: 123 KSFLNKAFAIFCLLMGILMLKRDR 146
              L + FA+  ++   ++    R
Sbjct: 69  GPRLQQLFAVCGIVAAFMLALSVR 92


>gi|116253780|ref|YP_769618.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
 gi|115258428|emb|CAK09531.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 254

 Score = 42.0 bits (98), Expect = 0.088,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 63/203 (31%), Gaps = 15/203 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +    + A  L G   G  G    L+ +P L+           +    A    L ++ 
Sbjct: 5   LSFYYAAVPAVLLVGLAKGGMGDALSLIGLPFLALV---------VSPVEAAAILLPILV 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              ++S +  R+HG  +   LK  +    I   +     + V  + L        +L  +
Sbjct: 56  FMDMISLVIWRKHG--DWATLKIMLPGAFIGIALGWATSALVPGNLLRIVIGAVTILFCL 113

Query: 140 -LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSG---ALGVGGGIFTNLLMLFYGASIYKA 195
                       +  P    + +   + G  SG    +   GG    +  L       + 
Sbjct: 114 RYFWSNFGPGAGKVIPPRGQRPVAASLWGTFSGYGSFVAHAGGAPFQIYALPLKLQPREY 173

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
           T TS    A++    L+     G
Sbjct: 174 TGTSVRFFAILNAVKLIPYFALG 196


>gi|90022273|ref|YP_528100.1| adenylosuccinate synthetase [Saccharophagus degradans 2-40]
 gi|89951873|gb|ABD81888.1| protein of unknown function DUF81 [Saccharophagus degradans 2-40]
          Length = 253

 Score = 42.0 bits (98), Expect = 0.088,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 79/263 (30%), Gaps = 33/263 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+   S ++  LS + G G GL+ +P L            +   VA+ T         V
Sbjct: 5   VLLFFISLVANMLSAMAGGGAGLLQLPALIFL--------GLPFSVALATHKIATVALGV 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + ++H +       +    +        V +  +  + +     +  I    +G+  + 
Sbjct: 57  GATLKHSQQNHTRWPVALIMLGFGLPGVFVGAKAVLSIPEPVAKVSLGILTAGLGVYSIF 116

Query: 144 RDRLYCERKFPDNYVKYIWGMVT---------GFLSGALGVGGGIFTNLLMLFYGASIYK 194
           + +L       +      +             G LS   G+     T  L+ +YG    +
Sbjct: 117 KKQLGQHYTPKNANALGHFLGGLGLFVLGFLNGALSSGTGL---FVTLWLVTWYGFDYKR 173

Query: 195 ATA-TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
           ATA T   V         L                L  V    + ++L  S+L       
Sbjct: 174 ATAYTMILVGMFWNGTGALTFAL------------LAEVQWAWLPMLLLGSLLGGYFGAA 221

Query: 254 LSYMIGKKYLTIGFSMIMFTTSF 276
           ++   G   +   F ++      
Sbjct: 222 VAIKHGNPLIKKVFEVVTILVGL 244


>gi|73543047|ref|YP_297567.1| hypothetical protein Reut_A3365 [Ralstonia eutropha JMP134]
 gi|72120460|gb|AAZ62723.1| Protein of unknown function DUF81 [Ralstonia eutropha JMP134]
          Length = 253

 Score = 42.0 bits (98), Expect = 0.089,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 87/243 (35%), Gaps = 24/243 (9%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGLV +P L  AF   G+  +      +GT+       +  + + + R+  I       
Sbjct: 23  GGGLVQIPALFSAFP--GMSPATL----LGTNKVASVAGTANAAIRYGRNVRIYWAATAP 76

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP-----DNY 157
            +    + ++  +  ++ +    L KA     + +    + +  L  E         +  
Sbjct: 77  AVVAAFVFSMAGAWALTMMPAEPLRKALPFVLVALLAYTVAKKDLGTEHAPSLTGTRERV 136

Query: 158 VKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
              + G   GF  G  G G G     + +  +G     A+A++  V+      ALL+   
Sbjct: 137 AALLAGAAIGFYDGVFGPGTGSFLMIVFVRVFGYDFLHASASTKVVNLATNLAALLLLA- 195

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                      S G +     L++   ++  + + ++L+   G  ++   F +++     
Sbjct: 196 -----------SKGHIWWQLGLVMAVANVAGSQVGSRLALRHGSGFVRKVFIVVVSALIL 244

Query: 277 VFA 279
             A
Sbjct: 245 KTA 247


>gi|32266751|ref|NP_860783.1| hypothetical protein HH1252 [Helicobacter hepaticus ATCC 51449]
 gi|32262803|gb|AAP77849.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 232

 Score = 42.0 bits (98), Expect = 0.089,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 57/175 (32%), Gaps = 15/175 (8%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP L            + M  A+G S+  +  +S    + +     +N+        
Sbjct: 1   MIIVPCLLLL--------GMQMEYAIGISIMQMIFSSAFGSLINIFQKKLNIHDGVFVGL 52

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP------DNYVK 159
              I    + +++  +    L   F +   +         +       P         + 
Sbjct: 53  GGLIGAAFSGVIVDTLSSQILLLLFLLLSCISFYKYAFDVKTTANPTPPITNPFKQKVLM 112

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
            I G +TG  + +LGVGGG+    ++ +Y G    K    S       +    + 
Sbjct: 113 IIAGFLTGIFAVSLGVGGGLILAPILAYYLGFDSKKVVPISLFFIIFASVSGSIS 167



 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+I+A FL+G  +   GVGGGL++ P+L+     +G D    + +    SL  I   SV
Sbjct: 110 VLMIIAGFLTGIFAVSLGVGGGLILAPILAY---YLGFDSKKVVPI----SLFFIIFASV 162

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              +    H  I+ +                  +++ V  S    A      L  IL L 
Sbjct: 163 SGSISLAAHDLIDFQSGLIVGLSSMFGVACGIYLMNKVTLSNHRYALIGIYALSIILTLW 222

Query: 144 R 144
           +
Sbjct: 223 K 223


>gi|307728604|ref|YP_003905828.1| hypothetical protein BC1003_0534 [Burkholderia sp. CCGE1003]
 gi|307583139|gb|ADN56537.1| protein of unknown function DUF81 [Burkholderia sp. CCGE1003]
          Length = 262

 Score = 42.0 bits (98), Expect = 0.090,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 85/270 (31%), Gaps = 35/270 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V+    G L GL GVGGG +M P+L   F       ++    A+GT L   A T  
Sbjct: 8   LLYSVSGLFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAIFCLLM 137
              + H   G+++ ++             VT L++             +        L+ 
Sbjct: 61  TGTLVHGLKGSVDWQVTLRLAAGSVPAATVTLLLLHRYGMDTPGASRLIQLVLGAALLVT 120

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY- 188
            + ++ R         R     +     +  + G + G L     VG G     ++L   
Sbjct: 121 AVALVFRPQLAALGAHRRRAPTQGRTLLLTMLTGAMLGVLVSLTSVGAGAIGVTVLLLLY 180

Query: 189 -GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                 +   +    +  +              L G   W LG V+   +L +L  S+  
Sbjct: 181 PMLPTTRIVGSDIAHAVPLTL------------LAGAGHWLLGSVDWSMLLSLLLGSLPG 228

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             + + LS       L    +  +      
Sbjct: 229 IAVGSMLSARAPDALLRNLLAATLTLVGLR 258



 Score = 37.0 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 48/120 (40%), Gaps = 6/120 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L ++   + G L  L  VG G + V VL   + ++     +   +A         P +
Sbjct: 147 LLLTMLTGAMLGVLVSLTSVGAGAIGVTVLLLLYPMLPTTRIVGSDIAHA------VPLT 200

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++   H   G+++  +L   +        V S++ +    + L    A    L+G+ ++
Sbjct: 201 LLAGAGHWLLGSVDWSMLLSLLLGSLPGIAVGSMLSARAPDALLRNLLAATLTLVGLRLV 260


>gi|134299371|ref|YP_001112867.1| hypothetical protein Dred_1512 [Desulfotomaculum reducens MI-1]
 gi|134052071|gb|ABO50042.1| protein of unknown function DUF81 [Desulfotomaculum reducens MI-1]
          Length = 360

 Score = 42.0 bits (98), Expect = 0.090,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 97/283 (34%), Gaps = 56/283 (19%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
            FL G LSG  G GG  VM P +            +    A+ ++L      +++   +H
Sbjct: 30  GFLGGVLSGFLGSGGAFVMTPGMMAL--------GVPGIAAVSSNLAHKFGKALVGAKKH 81

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHV--------DKSFLNKAFAIFCLLMGILM 141
            + G ++ K+    I  L +   +   +   +           +++  F +    + I +
Sbjct: 82  SKMGNVDAKLGIFMIIFLLLGVNMAVHLQEAIFSSLGKAGSNLYISIVFVVLLSGLSIFI 141

Query: 142 LKR-----DRLYCERKFP-----------------------DNYVKYIWGMVTGFLSGAL 173
           ++       +     K P                         +   +  M TG+L+G +
Sbjct: 142 IRDILGQGKKKKESAKNPLAEKICNLNIPPMIYFKVANVRVSLWFVALIAMATGWLAGTV 201

Query: 174 GVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           GVGG +    ++   G     A  T   ++                          GFV+
Sbjct: 202 GVGGFVGVPAMIYLLGIPTTVAAGTELFLAIFSGALGAFQYALH------------GFVD 249

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           I  VL++   S++   +    + M+ ++ + +  ++++  ++ 
Sbjct: 250 IRLVLLLYLGSLIGLHIGANATKMVSEQKIKLVMAVVIGMSAI 292


>gi|238852766|ref|ZP_04643172.1| conserved domain protein [Lactobacillus gasseri 202-4]
 gi|282850724|ref|ZP_06260099.1| putative membrane protein [Lactobacillus gasseri 224-1]
 gi|238834616|gb|EEQ26847.1| conserved domain protein [Lactobacillus gasseri 202-4]
 gi|282558132|gb|EFB63719.1| putative membrane protein [Lactobacillus gasseri 224-1]
          Length = 253

 Score = 42.0 bits (98), Expect = 0.090,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 87/264 (32%), Gaps = 27/264 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
               +I    L G LS +  +   L   PVL       GI        A  T+   +  T
Sbjct: 6   LFIYLIFGGILGGLLSTIASM-ASLATYPVLLSV----GIPPVY----ANTTNDAALIWT 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            V S     +    + K +  +     I + +  +++         K         G+++
Sbjct: 57  GVGSTAASLKELKGHWKQVSFYSIFTIIGSALGCMLLIQFPGKIFEKIVPFCIAFSGLMI 116

Query: 142 LKRDRLYCERKFPDN-----YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           L    ++   +          +  +  ++ G  +G  G   G+   +++       +   
Sbjct: 117 LFSGEIHLGNESDHPNRLVQALSLLCLLIAGAYAGYFGAASGVLMLVILNAISDDDFLTV 176

Query: 197 -ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            A    + AL    AL++ +++              +   A + +   +++ +    ++ 
Sbjct: 177 NAMKNIIGALSNLVALIIYMFTEK------------IYWNAAIPLAIGALIGSYFGPRIM 224

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
             I  K + +G +++    +  FA
Sbjct: 225 RHIPVKIIRLGIAILALIQATYFA 248


>gi|148273930|ref|YP_001223491.1| putative permease [Clavibacter michiganensis subsp. michiganensis
           NCPPB 382]
 gi|147831860|emb|CAN02830.1| conserved membrane protein, putative permease [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 266

 Score = 42.0 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 70/211 (33%), Gaps = 18/211 (8%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             I    A+ T+       +  S +   R    +++       V    +   + + + + 
Sbjct: 47  PGITPVEALATNKLASLFGTSTSAVTWYRRTHPDLRTALPMAAVALAGSYGGASLAALLP 106

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN-----YVKYIWGMVTGFLSGALGVG- 176
            S       +  +++ ++ + R RL               +  + G+V GF  G +G G 
Sbjct: 107 ASVFKPLVVVALIIVAVVTIARPRLGDVAALRHTGRKHHGIAALLGVVIGFYDGLIGPGT 166

Query: 177 GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G      L+   G     A+A +  V+      AL   I              G V    
Sbjct: 167 GTFLIIALITALGYDFVLASAKAKIVNVATNLGALAFFIPQ------------GHVLWAL 214

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGF 267
            L +   +++     ++++   G +++ I F
Sbjct: 215 ALGMGVANMVGGYAGSRMAVARGSRFIRIAF 245


>gi|117918521|ref|YP_867713.1| hypothetical protein Shewana3_0062 [Shewanella sp. ANA-3]
 gi|117610853|gb|ABK46307.1| protein of unknown function DUF81 [Shewanella sp. ANA-3]
          Length = 245

 Score = 42.0 bits (98), Expect = 0.092,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 83/260 (31%), Gaps = 31/260 (11%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  + I A  ++G     F  G G + VP+L      + I  +    + +   L  +   
Sbjct: 7   FWLVAIPAVLITGISKSGFAGGVGGLTVPLL-----ALAISPATAAAIMLP-LLIYMDFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           SV S+         N + L   +    +   +   +   +++ +L        L  G+  
Sbjct: 61  SVRSWWGQH-----NPRQLWILLPAAIVGIGIAYWLFDRLNEDYLRAILGCVSLGFGLYG 115

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA----TA 197
           L        +  P   V  + G+  GF S     GG       +  Y   +  A     A
Sbjct: 116 LILGDKT--QATPSPLVGRLCGLTAGFTSFVAHAGG-----PPLNAYLLPLRLAKPEFLA 168

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T+    A++    L+     G    G         NI   L++ P++ L   L   +   
Sbjct: 169 TAVVFFAVVNLVKLVPYSLLGQINQG---------NILISLLLAPLAWLGVKLGLAIQDK 219

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           I  +       ++M      
Sbjct: 220 ISDRLFKRIILILMVLVGIR 239


>gi|330878797|gb|EGH12946.1| hypothetical protein Pgy4_13316 [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 169

 Score = 42.0 bits (98), Expect = 0.093,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 49/130 (37%), Gaps = 9/130 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 30  LTTLAILAVVAFIAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 80

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     +    +     +++  ++   +LN+   +     G+
Sbjct: 81  FGSATASFTFYRRKLFHPRQWIHAVVGTAVGAAAGAVIAHYLPAEWLNQMLPVIVFGCGL 140

Query: 140 LMLKRDRLYC 149
            +L       
Sbjct: 141 YLLFGGTPKA 150


>gi|312129984|ref|YP_003997324.1| hypothetical protein Lbys_1251 [Leadbetterella byssophila DSM
           17132]
 gi|311906530|gb|ADQ16971.1| protein of unknown function DUF81 [Leadbetterella byssophila DSM
           17132]
          Length = 249

 Score = 42.0 bits (98), Expect = 0.094,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 66/187 (35%), Gaps = 17/187 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++C +++    +G ++       G + VP+ +  F        + + +    ++ VI   
Sbjct: 15  FLCAMLIGMSKTGIMNI------GTLTVPIFAWIFGAKYSTGIVLILLCFADTIAVI--- 65

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
                             +K  + +  +   +  +  ++V+        ++  LL  ++M
Sbjct: 66  --------YYRKAFLWSEVKKLLPMALLGLGIGLISGNYVNDKVFKVMISVCLLLGVVIM 117

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           +  +R    R+  ++        +    S  +G   G   ++ ML         TATSA 
Sbjct: 118 VLTERSDRFRQTVEHPWYSPLFGLIMGFSTMVGNAAGPALSVYMLSKKLDKVTFTATSAW 177

Query: 202 VSALIAF 208
              ++ F
Sbjct: 178 FIMILNF 184


>gi|300709961|ref|YP_003735775.1| hypothetical protein HacjB3_02950 [Halalkalicoccus jeotgali B3]
 gi|299123644|gb|ADJ13983.1| hypothetical protein HacjB3_02950 [Halalkalicoccus jeotgali B3]
          Length = 321

 Score = 42.0 bits (98), Expect = 0.094,   Method: Composition-based stats.
 Identities = 50/272 (18%), Positives = 94/272 (34%), Gaps = 25/272 (9%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L +   FL G L G FG+GG  ++ P L               +VA+G+ L  +  T
Sbjct: 1   MITLFVGFGFLIGILFGFFGMGGSFLVTPALLVL--------EYPANVAVGSGLAFVFGT 52

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVT---SLMISHVDKSFLNKAFAIFCLLMG 138
           SV+  ++HR HG ++ ++       + +   +      ++  +  + L  + A   LL  
Sbjct: 53  SVIGALKHRDHGQVDYRLAALMTVGMTLGIELGKRVVFLLEALGSADLVISVAYVGLLAA 112

Query: 139 ILMLKRDRLYCERKFPD------------NYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
           + +        E                      + G     +   L VGG I     +L
Sbjct: 113 VGVFTLWDSRTEVDESGSDLAGRVHSIHIPPTVSLVGGNAVSVWIVLAVGGAIGVLSGLL 172

Query: 187 FYGASIYKATATSAGVSALIAFP-ALLVRIYSGWGLNGLPPWS-LGFVNIGAVLIILPIS 244
             G       A   G+    A      +   +  G  G   ++  G V +  V  +L  S
Sbjct: 173 GVGGGFLLMPAMVYGLGVPTAVAVGTDILQITVSGAYGAFVYAQAGSVALPVVGSLLAGS 232

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            L   +    + ++ +  +   F+ ++   S 
Sbjct: 233 ALGARIGAGATKLVDEGAIKGYFAAMLLAGSL 264


>gi|152994173|ref|YP_001339008.1| hypothetical protein Mmwyl1_0131 [Marinomonas sp. MWYL1]
 gi|150835097|gb|ABR69073.1| protein of unknown function DUF81 [Marinomonas sp. MWYL1]
          Length = 253

 Score = 42.0 bits (98), Expect = 0.096,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 90/254 (35%), Gaps = 26/254 (10%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  +  + L+I   FL+G ++ L G GG  + +P L     +MG+       +A  T+  
Sbjct: 2   DYSLFTVSLLIGTGFLAGIINTLAG-GGSNLTLPALM----VMGMPAD----IANATNRV 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   +V +    R+   ++   +   +    +  VV +   S+  +++L        + 
Sbjct: 53  GVFLQNVAATFGFRKAKKLDNADILPVMIPSLLGGVVGAFAASYAPEAWLKPLLLSAMIG 112

Query: 137 MGILMLKRDRLYCER------KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
           M ++M+ R  +          K  +    +I   + G   G +  G G      +   G 
Sbjct: 113 MTLIMIVRPTMIAPPEGTVPFKVSEKPSAWIALFIAGVYGGFVQAGVGFILIAALA--GT 170

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
             Y    T+A           L      W    L         I  ++ +   ++L + L
Sbjct: 171 LRYDLVRTNALKMVCTLGFTALALGVFIWNDQIL--------WIPGLI-LASGTMLGSFL 221

Query: 251 ATKLSYMIGKKYLT 264
           A K++      +L 
Sbjct: 222 AVKMAIKANPSHLK 235


>gi|294055499|ref|YP_003549157.1| protein of unknown function DUF81 [Coraliomargarita akajimensis DSM
           45221]
 gi|293614832|gb|ADE54987.1| protein of unknown function DUF81 [Coraliomargarita akajimensis DSM
           45221]
          Length = 249

 Score = 42.0 bits (98), Expect = 0.097,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 62/194 (31%), Gaps = 7/194 (3%)

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +    ++G  L ++    +++   +R+H       +        +  ++   + S VD  
Sbjct: 41  LPPKASVGILLPILISADIIAVTVYRKHA--LWAYIVKLAPWTILGILIGWAVFSRVDDQ 98

Query: 125 FLNKAFAIFCLLMG----ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
            +     I  L M         +R       + P + +      + G  +  +    G  
Sbjct: 99  QVKVLIGIILLSMCAVHFFRKWQRRHHEEADQLPHHPLFIAATGIIGGFATMVANAAGPV 158

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             L  +  G   Y    T+A    L+    +   +  G        +S  F+ + A++  
Sbjct: 159 AALYFIASGLPKYAYIGTAAWFFFLVNLFKIPFMMQLGIIDTSSLGFSASFM-LYALIGA 217

Query: 241 LPISILITPLATKL 254
                ++  +  +L
Sbjct: 218 AVAPFIVKKINQRL 231


>gi|25026688|ref|NP_736742.1| hypothetical protein CE0132 [Corynebacterium efficiens YS-314]
 gi|259508178|ref|ZP_05751078.1| permease [Corynebacterium efficiens YS-314]
 gi|23491967|dbj|BAC16942.1| hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259164267|gb|EEW48821.1| permease [Corynebacterium efficiens YS-314]
          Length = 250

 Score = 42.0 bits (98), Expect = 0.098,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 87/255 (34%), Gaps = 25/255 (9%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++    +++++  +   L  + G+G GLV  PVLS             + +  G S    
Sbjct: 1   MLTIASVLLISVLIGAVLQRITGLGVGLVAGPVLSAVLG-----PVAGITMVNGLS---- 51

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL-M 137
              +V +    R+    + K  +     L + ++   L++  ++  +L        LL +
Sbjct: 52  IINAVNNAWSVRKRT--DWKRFRILAGALVVGSLPAVLVVHLLNGPWLFIIIGALVLLAL 109

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
            I +   +R              ++G++ GF+S   G+ G   T               A
Sbjct: 110 SISLFPTERFRINEHAKGP--MILFGIIGGFMSTVAGIAGPALTV-YARLSRWDYRDFVA 166

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI--TPLATKLS 255
           T   +  ++     +  +     + GL           A L I  ++++        +L+
Sbjct: 167 T---LHPILLVANTVSFLLKVVLIGGLNFGET-----PAWLWIAAVAMIFVGAWFGDRLN 218

Query: 256 YMIGKKYLTIGFSMI 270
             I         +++
Sbjct: 219 DRISTPMAKRLATIL 233


>gi|114045571|ref|YP_736121.1| hypothetical protein Shewmr7_0058 [Shewanella sp. MR-7]
 gi|113887013|gb|ABI41064.1| protein of unknown function DUF81 [Shewanella sp. MR-7]
          Length = 245

 Score = 42.0 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 83/260 (31%), Gaps = 31/260 (11%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  + I A  ++G     F  G G + VP+L      + I  +    + +   L  +   
Sbjct: 7   FWLVAIPAVLITGISKSGFAGGVGGLTVPLL-----ALAISPATAAAIMLP-LLIYMDFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           SV S+         N + L   +    +   +   +   +++ +L        L  G+  
Sbjct: 61  SVRSWWGQH-----NPRQLWILLPAAIVGIGIAYWLFDRLNEDYLRAILGCVSLGFGLYG 115

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA----TA 197
           L        +  P   V  + G+  GF S     GG       +  Y   +  A     A
Sbjct: 116 LILGDKT--QATPSPLVGRLCGLTAGFTSFVAHAGG-----PPLNAYLLPLRLAKPEFLA 168

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T+    A++    L+     G    G         NI   L++ P++ L   L   +   
Sbjct: 169 TAVVFFAVVNLVKLVPYSLLGQINQG---------NILISLLLAPLAWLGVKLGLAIQDK 219

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           I  +       ++M      
Sbjct: 220 ISDRLFKRIILILMVLVGIR 239


>gi|330948103|gb|EGH48363.1| hypothetical protein PSYPI_41104 [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 102

 Score = 42.0 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 34/84 (40%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             + M   + TSL VIA  S+ S +     G ++  +   +     I  V+   +  ++ 
Sbjct: 19  SDLNMKSVVATSLAVIALVSMGSVITASLSGVMHWAVGAPFALGAVIGLVIGRQVARYLA 78

Query: 123 KSFLNKAFAIFCLLMGILMLKRDR 146
              L + FA+  ++   ++    R
Sbjct: 79  GPRLQQLFAVCGIVAAFMLALSVR 102


>gi|290999413|ref|XP_002682274.1| predicted protein [Naegleria gruberi]
 gi|284095901|gb|EFC49530.1| predicted protein [Naegleria gruberi]
          Length = 399

 Score = 42.0 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 32/69 (46%)

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
           I  +  G L+  LG+GGG+  + L+L  G+    + AT++ +    +  + +  + +G  
Sbjct: 264 IACVGAGILASMLGIGGGMVKSPLLLILGSDPVSSQATTSFMILFTSSISTVQYLIAGLL 323

Query: 221 LNGLPPWSL 229
                 W L
Sbjct: 324 PVDYGLWFL 332



 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 11/123 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L  +A   +G L+ + G+GGG+V  P+L       G D          T+  +I  TS
Sbjct: 259 VTLYPIACVGAGILASMLGIGGGMVKSPLLLIL----GSDPVSSQ----ATTSFMILFTS 310

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV---DKSFLNKAFAIFCLLMGI 139
            +S +++   G + +     ++    +  V   L++              F +  + +  
Sbjct: 311 SISTVQYLIAGLLPVDYGLWFLACGILCGVFGQLILDLWLDKSGRRSIMIFIVAIVTLAA 370

Query: 140 LML 142
             L
Sbjct: 371 TFL 373


>gi|158706497|sp|Q9PFB4|Y764_XYLFA RecName: Full=UPF0721 transmembrane protein XF_0764
          Length = 261

 Score = 42.0 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 6/154 (3%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           H+A+GTS   ++  +  + + H   G +  +    +  V  +   + S +   +D   L 
Sbjct: 45  HIAIGTSAVAVSANAYANLIAHAWKGHVWWRSAVIFALVGTLGAFLGSSIGMLIDGQRLL 104

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY-----IWGMVTGFLSGALGVGGGIFTN 182
             F +   ++G+LML+        +     ++         ++TG  SG  G+GGG    
Sbjct: 105 LLFGLLMAMVGLLMLRGRATAPHAEQHQTVLRMCMKTSAVAILTGAASGFFGIGGGFLIV 164

Query: 183 LLMLF-YGASIYKATATSAGVSALIAFPALLVRI 215
             ++F        A  +S            L   
Sbjct: 165 PALIFATRMPTINAIGSSLLAVGTFGLITTLNYA 198


>gi|294954881|ref|XP_002788341.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239903653|gb|EER20137.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 318

 Score = 42.0 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 2/109 (1%)

Query: 111 TVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           +V+  +M+  V   F+    +   L + + +          K     +  I G   GF++
Sbjct: 135 SVIVCIMLMAVPGLFVVAIKSAAMLKLAVKLSGAMLCNATAKSSALVLGNIIG--IGFIA 192

Query: 171 GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
             +G GGG     L+L+   +  +A AT + V  + +    L     G+
Sbjct: 193 ALVGQGGGSLITPLLLYMELNPQQAAATGSVVMLITSSSLALSFGLGGF 241


>gi|170780910|ref|YP_001709242.1| putative integral membrane protein [Clavibacter michiganensis
           subsp. sepedonicus]
 gi|169155478|emb|CAQ00587.1| putative integral membrane protein [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 266

 Score = 42.0 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 18/211 (8%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             I    A+ T+       +  S +   R    +++       V  +     + + + + 
Sbjct: 47  PGITPVEALATNKLASLFGTTTSAVTWYRRTHPDLRTALPMAAVALVGAYGGASLAALLP 106

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN-----YVKYIWGMVTGFLSGALGVG- 176
            S       +  +++ ++ + R +L               +  + G+V GF  G +G G 
Sbjct: 107 SSVFKPLVVVALIIVAVVTIARPQLGDVAAIRHTGRKHHGIAALLGVVIGFYDGLIGPGT 166

Query: 177 GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
           G      L+   G     A+A +  V+      AL   I              G V    
Sbjct: 167 GTFLIIALITALGYDFVLASAKAKIVNVATNLGALAFFIPQ------------GHVLWAL 214

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGF 267
            L +   +++     ++++   G +++ I F
Sbjct: 215 ALGMGVANMVGGYAGSRMAVARGSRFIRIAF 245


>gi|110635927|ref|YP_676135.1| hypothetical protein Meso_3601 [Mesorhizobium sp. BNC1]
 gi|110286911|gb|ABG64970.1| protein of unknown function DUF81 [Chelativorans sp. BNC1]
          Length = 256

 Score = 42.0 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/190 (11%), Positives = 54/190 (28%), Gaps = 15/190 (7%)

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
               +   I   I   +I    +   V +  +  +  + +  A  +F +++         
Sbjct: 71  RAWHQRAHIVRGIAAPFIAGSILGAAVGTFFVIQLPDAVMKLALGLFVIVVTW------A 124

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
            +       +        V  FLS   G  G +                 AT A    + 
Sbjct: 125 KFPRAASIGSAGLVAGSAVLAFLSMLFGATGPLLAAAFSQIVTNDRKALIATQAAGMTIQ 184

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
               ++    +G+              +  + +++    L T   ++L  ++ +K     
Sbjct: 185 HGLKVVAFSIAGFAFAQ---------WLPFIALMICSGYLGTLYGSRLLDVLPEKSFRRW 235

Query: 267 FSMIMFTTSF 276
           F + +   + 
Sbjct: 236 FRVGLTLVAL 245


>gi|302527067|ref|ZP_07279409.1| predicted protein [Streptomyces sp. AA4]
 gi|302435962|gb|EFL07778.1| predicted protein [Streptomyces sp. AA4]
          Length = 239

 Score = 42.0 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 64/196 (32%), Gaps = 13/196 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L  +A   +G + GL G G  LV  P+L       G      + + +   +  +    
Sbjct: 1   MILGALAIAFAGFIGGLTGFGASLVGTPLLLLI----GFPLPQVVVINL---IATMI--- 50

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               + HR    I  + +              +L +  +    L        +L G+ +L
Sbjct: 51  TRLAVLHRERAHIAWRRVAVLGTASLPGAAAGALTLHLLPPHALRILAGTVVVLSGLRLL 110

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            R         P    + I G++ G+LS    + G     LL               AG 
Sbjct: 111 LRPTREAHPATPAK--QTIAGLLGGYLSTTTSLNGAPPAVLLASA-KVPPRTFVGDLAGY 167

Query: 203 SALIAFPALLVRIYSG 218
             +    +LL+ I +G
Sbjct: 168 FVVTNCLSLLLLITAG 183


>gi|90409668|ref|ZP_01217685.1| hypothetical membrane protein [Photobacterium profundum 3TCK]
 gi|90329021|gb|EAS45278.1| hypothetical membrane protein [Photobacterium profundum 3TCK]
          Length = 247

 Score = 42.0 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 59/169 (34%), Gaps = 18/169 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L     F+   + G+ G G G+V VP+LS           + M + + T  G +   
Sbjct: 5   IIALAAGTLFIGSFVQGMVGFGLGMVSVPILSLFL-------DVKMAIPIATVFGWLITI 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            V   M       IN K+         +       ++ +V+ +++  A  I  + +G   
Sbjct: 58  PVCLKMRQH----INFKLAFLLYIPAIVGIQFGGELLKNVESAYILLAMGIILIFVGGST 113

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
           L    +  +              + G LSG LG G G     ++ +   
Sbjct: 114 LINRPIRVKDNIFSAA-------ICGLLSGVLGAGAGESGPPIVTYMNC 155


>gi|293571041|ref|ZP_06682083.1| conserved hypothetical protein [Enterococcus faecium E980]
 gi|291608881|gb|EFF38161.1| conserved hypothetical protein [Enterococcus faecium E980]
          Length = 196

 Score = 42.0 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 73/198 (36%), Gaps = 15/198 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  V   L+ T+  + G+GGG+++ P+L        I       ++  +++ V   + V
Sbjct: 4   LIYFVVIVLANTVGAISGMGGGVLIKPILDL------IGAHSVAGISFYSTVAVFTMSIV 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-------LNKAFAIFCLL 136
            +  +     ++N +I+        +  +  +++     + F       L + F     L
Sbjct: 58  STVRQVSSGKSLNWQIVGWVSGGAVVGGIAGNIVFEIFLRLFENEKHVQLIQIFLTVLTL 117

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKA 195
           +            +          I G + GFL+  LG+GGG     LLML +   I +A
Sbjct: 118 V-FAFFYTKHHQPKFHLTSWIWYLICGGILGFLASFLGIGGGPINVSLLMLMFALPIKEA 176

Query: 196 TATSAGVSALIAFPALLV 213
           T  S           L+ 
Sbjct: 177 TLYSLSTIFFSQLAKLVT 194


>gi|269986239|gb|EEZ92549.1| protein of unknown function DUF81 [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
          Length = 258

 Score = 42.0 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 101/265 (38%), Gaps = 23/265 (8%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++    +I + +     +  + G+GGG + V        L           A G SL  I
Sbjct: 1   MLAIFIIIPIFAMFVAFIGNMAGIGGGALFVLFFLYYLGLSSF-------YASGLSLIAI 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           + +S++    + RHG +N+ + K  + +  I  ++ SL+   V  +     F    L +G
Sbjct: 54  STSSIIGSYSNIRHGFVNLHLFKILLAMGLIGVLLGSLLSFIVPTAIFKGVFGFIPLTIG 113

Query: 139 ILML------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGAS 191
           +  L      ++ + Y   K        +  ++ G +SG  G+G G  T   M   +  +
Sbjct: 114 VFSLIATIKQRKIKNYKIPKNKFGKDVSVISLIAGAISGFTGMGIGGITGTYMTAVHKMN 173

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
                +T      + +    L+ +    G       +L ++       I+  + +   + 
Sbjct: 174 PKIIFSTIILAMIITSIFGGLLHL----GTINFSKDTLLYI-----PFIIIGAAIGAFIG 224

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSF 276
            ++S ++  K L +  S+++  T  
Sbjct: 225 ARVSGIVKSKNLRLFQSLVIIFTGL 249


>gi|332527981|ref|ZP_08404015.1| putative permease [Rubrivivax benzoatilyticus JA2]
 gi|332112555|gb|EGJ12348.1| putative permease [Rubrivivax benzoatilyticus JA2]
          Length = 257

 Score = 42.0 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 85/250 (34%), Gaps = 38/250 (15%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L   F        +    A+GT L   A T  +    H   GT++ ++LK     
Sbjct: 23  LMTPILVLLF-------GVAPASAIGTDLWFAAITKSVGGFVHHSRGTVDREVLKLLCLG 75

Query: 107 LPITTVVT-SLM----ISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC-----------E 150
               ++ T + +     S +    L  A     LL  + M+ + R+             +
Sbjct: 76  SLPASLATLAWLHLSNASQLKSGLLMSALGAVLLLTAVAMVFKKRVQAVGLKLRTVSPVD 135

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF---YGASIYKATATSAGVSALIA 207
            K     +  + G V G L     +G G    +++++   +  +  +   T    +  + 
Sbjct: 136 FKRWQPALTVVAGAVLGLLVTLTSIGAGALGAVMLVYLYPFRMTPSRLVGTDIVHAIPLT 195

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
             A    +             LG V++  +  +L  SI    + + LS  + +  L    
Sbjct: 196 IVAGTGHLL------------LGNVDLVLLSTLLIGSIPGIIIGSHLSTRMPEGLLRPAI 243

Query: 268 SMIMFTTSFV 277
           + ++      
Sbjct: 244 AALLVVAGLK 253


>gi|322369715|ref|ZP_08044278.1| hypothetical protein ZOD2009_09505 [Haladaptatus paucihalophilus
           DX253]
 gi|320550633|gb|EFW92284.1| hypothetical protein ZOD2009_09505 [Haladaptatus paucihalophilus
           DX253]
          Length = 330

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 101/274 (36%), Gaps = 25/274 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I   +    + GTL G FG+GG  ++ P L                VA+G+ L  + 
Sbjct: 8   LLLILAFVGFGLMIGTLFGFFGMGGSFLVTPALLVI--------GYPAEVAVGSGLAFVF 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFC 134
            TSV+  ++HR HG ++ K+       + I       ++  +  +      ++ A+    
Sbjct: 60  GTSVIGAIKHRDHGHVDYKLAAIMTVAMTIGIEAGKYVVLFLKATGQADLIISIAYVGLL 119

Query: 135 LLMGILMLKRDRLYCER------------KFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            ++G+  L+  R   +             + P          V+G +  A+G+  G+ + 
Sbjct: 120 AIVGLFTLRDARSTDDESSVDLSETVQGIELPPIVTLRGDIQVSGVIIFAVGLAVGVLSG 179

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            L +  G  +  A     GV A +A    +++I                V +  V  +L 
Sbjct: 180 FLGVGGGFLLMPAMMYGLGVPAAVAVGTDILQITISGAYGAFSYAQADAVALPVVGAMLI 239

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            S L   +    + ++ +  +   F+ ++   S 
Sbjct: 240 GSALGARIGAGATDLVDEDDIKGYFAAMLLAGSL 273


>gi|119716310|ref|YP_923275.1| hypothetical protein Noca_2079 [Nocardioides sp. JS614]
 gi|119536971|gb|ABL81588.1| protein of unknown function DUF81 [Nocardioides sp. JS614]
          Length = 321

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 51/141 (36%), Gaps = 1/141 (0%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++    +  +++   G+ G  +++PV    F L  +   +    A+GTSL +      
Sbjct: 7   WFMLPVCIIIASVAMFSGISGAAMLIPVFLIGFPLFDL-PRLTTVEAIGTSLFLETSGFG 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                + R   ++       I       ++ +L  +H     L   + +  + + +L+++
Sbjct: 66  TGLYRYIRMRLVDSATAWRLIARTLPLGMLGALASAHAPVQALRLGYGVAMVGLAVLLVR 125

Query: 144 RDRLYCERKFPDNYVKYIWGM 164
                     P +    + G+
Sbjct: 126 ETHATEPAVVPASSQPTLAGV 146


>gi|144900393|emb|CAM77257.1| permease [Magnetospirillum gryphiswaldense MSR-1]
          Length = 309

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 60/187 (32%), Gaps = 43/187 (22%)

Query: 52  LSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITT 111
           ++     +GI  +    VA+GT    I  +SV   + H R G +++K+         + +
Sbjct: 39  MTPLLIFLGIPPA----VAVGTEAAQIVASSVSGVLAHWRRGNVDIKMGLILTMGGFVGS 94

Query: 112 VVTSLMISHVDKS-----FLNKAFAIFCLLMGILML------------------------ 142
                +   +         +   + +F  ++G +M                         
Sbjct: 95  FGGVELFKWLRGMGQVDLVIALCYVVFLGIVGGMMFIESIQSLVQSHRAGEAGVARKKLH 154

Query: 143 ---------KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASI 192
                     + R    + +    +    G++ G L+  +GVGGG      M++  G   
Sbjct: 155 QHTWIHGLPFKIRFRRSKLYISAILPLSLGLLVGVLAAIMGVGGGFIMVPAMIYLLGMPT 214

Query: 193 YKATATS 199
                TS
Sbjct: 215 SVVVGTS 221



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 8/89 (8%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR-RHGTI 95
           + + GVGGG +MVP +       G+  S+     +GTSL  I   +  S   H  R+ T+
Sbjct: 191 AAIMGVGGGFIMVPAMIYLL---GMPTSVV----VGTSLFQIIFVTANSTFLHATRNFTV 243

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKS 124
           ++ +    +    I   V + M   +   
Sbjct: 244 DVVLALLLLLGGVIGAQVGAKMSVRLKGE 272


>gi|15837366|ref|NP_298054.1| membrane protein [Xylella fastidiosa 9a5c]
 gi|9105656|gb|AAF83574.1|AE003917_8 membrane protein [Xylella fastidiosa 9a5c]
          Length = 264

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 6/154 (3%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           H+A+GTS   ++  +  + + H   G +  +    +  V  +   + S +   +D   L 
Sbjct: 48  HIAIGTSAVAVSANAYANLIAHAWKGHVWWRSAVIFALVGTLGAFLGSSIGMLIDGQRLL 107

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY-----IWGMVTGFLSGALGVGGGIFTN 182
             F +   ++G+LML+        +     ++         ++TG  SG  G+GGG    
Sbjct: 108 LLFGLLMAMVGLLMLRGRATAPHAEQHQTVLRMCMKTSAVAILTGAASGFFGIGGGFLIV 167

Query: 183 LLMLF-YGASIYKATATSAGVSALIAFPALLVRI 215
             ++F        A  +S            L   
Sbjct: 168 PALIFATRMPTINAIGSSLLAVGTFGLITTLNYA 201


>gi|108799891|ref|YP_640088.1| hypothetical protein Mmcs_2925 [Mycobacterium sp. MCS]
 gi|119869001|ref|YP_938953.1| hypothetical protein Mkms_2969 [Mycobacterium sp. KMS]
 gi|108770310|gb|ABG09032.1| protein of unknown function DUF81 [Mycobacterium sp. MCS]
 gi|119695090|gb|ABL92163.1| protein of unknown function DUF81 [Mycobacterium sp. KMS]
          Length = 260

 Score = 41.6 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 75/260 (28%), Gaps = 36/260 (13%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC-MHVAMGTSLGVIAPT 81
           + LI +A   +G ++ + G G  L+  P L       G       M  A+G     +   
Sbjct: 6   MVLIALAGVGAGAINAIVGSGT-LITFPTLVAL----GYPPVTATMSNAVG-----LVAG 55

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            V     +RR        L+  I    +  +  + ++ H+ +        +  +   IL+
Sbjct: 56  GVSGTWGYRRELRGQWHRLRWQIPGSLLGAMAGAWLLLHLPEKVFIAIVPVLLIAALILV 115

Query: 142 LKRDRLYCERKFPDN--------------YVKYIWGMVTGFLSGALGVGGGIFTNLLM-L 186
           +   R+    +                      I   + G   G      GI    +M  
Sbjct: 116 IVGPRIQAWARQRSESAGRSLDHISRGRMAALVIGTFLVGVYGGYFTAAQGILLIAVMGA 175

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
                + +  A    +S ++   A +      +            ++  A  +I   S+L
Sbjct: 176 LLPEDMQRMNAAKNLLSLIVNVVAAVAYTLVAFDR----------ISWAAAGLIAVGSLL 225

Query: 247 ITPLATKLSYMIGKKYLTIG 266
              L       +    L   
Sbjct: 226 GGFLGAHYGRRLSPNALRAV 245


>gi|157368549|ref|YP_001476538.1| hypothetical protein Spro_0300 [Serratia proteamaculans 568]
 gi|157320313|gb|ABV39410.1| protein of unknown function DUF81 [Serratia proteamaculans 568]
          Length = 248

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 56/164 (34%), Gaps = 14/164 (8%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           + +   +    ++     ++  + G+ G G  LV  P+++    +  I       +A+  
Sbjct: 1   MQETLTLSGYLVLAATLLVAYVIFGIAGFGSALVASPIMALYMPVAKIVPL----LALLD 56

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
               I   S       R         LK  + ++ I +++ + ++       L  A  IF
Sbjct: 57  MCAAIVNVS-------RDGRNAQWPELKRLVPLMIIGSLLGAAILLKTRPEILLLALGIF 109

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
            +   +  L   +   +           +G+V G  S   G GG
Sbjct: 110 VVFYALYSLSGLKPARQF---SPRAAVPFGLVGGIFSALFGSGG 150


>gi|332971640|gb|EGK10590.1| hypothetical protein HMPREF0476_0744 [Kingella kingae ATCC 23330]
          Length = 251

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 95/265 (35%), Gaps = 30/265 (11%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +   I V   ++G ++ + G GG  +++PVL     + GI       +A G++   +   
Sbjct: 7   HYAAIAVLGTIAGVINIMAG-GGSNLILPVLM----MFGIPPD----IANGSNRIGVFIQ 57

Query: 82  SVMSFMEHRRHGTINMKI-LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           ++       + G I  +   +  +    +  VV S++ S +    L     +  L +  L
Sbjct: 58  TITGIRGFAKAGKIPPRSDWQKVVIPTLLGGVVGSILASVLPNWLLKPLLLLSMLFVAGL 117

Query: 141 MLKRD-----RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYK 194
           +L +      +     K   + + +    V G   G +  G G+    +     G  + +
Sbjct: 118 VLFKADLFNVKPDAAPKL-MSPLAWATLFVIGIYGGFVQAGVGLLMLPVFAGMLGYDMIR 176

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
           + A     +      A+ V +  G        WS+G       L +   + L   L  KL
Sbjct: 177 SNALKLVCTFGFTTAAVTVFLLQGQ-----VWWSVG-------LTLAASNSLGAILGVKL 224

Query: 255 SYMIGKKYLT-IGFSMIMFTTSFVF 278
           +  +    +  + F M +   S  F
Sbjct: 225 ALKVPATTMRWVIFMMTLVAVSLAF 249


>gi|124025619|ref|YP_001014735.1| hypothetical protein NATL1_09121 [Prochlorococcus marinus str.
           NATL1A]
 gi|123960687|gb|ABM75470.1| Hypothetical protein NATL1_09121 [Prochlorococcus marinus str.
           NATL1A]
          Length = 257

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 70/178 (39%), Gaps = 14/178 (7%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  + +  +I L I++ F S  +S L G G GL+ +P L            +    A+ T
Sbjct: 1   MLNNDIFSHIILGIIS-FFSNFISALSGGGAGLIQLPALLFL--------GLPFSKALAT 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
                    + + + H +  ++ +      +       ++ +   S +  SF      I 
Sbjct: 52  HKVASVALGLGASIPHLKRRSLRINYALLILISGIPGVLLGAYTSSILPSSFSTTLLGIL 111

Query: 134 CLLMGILMLKRDRL-YCERKFPDNYVKYIWG----MVTGFLSGALGVGGGIFTNLLML 186
            L +    +K+  L    +K   N ++ + G     + GFL+G L  G G+F  + M+
Sbjct: 112 TLFLSFYSIKQKNLGSSNQKLSINKLRILIGSFGLFIIGFLNGYLSSGTGLFVTIWMI 169


>gi|111020570|ref|YP_703542.1| hypothetical protein RHA1_ro03581 [Rhodococcus jostii RHA1]
 gi|110820100|gb|ABG95384.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 251

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 43/114 (37%), Gaps = 6/114 (5%)

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
           ++ K L+       I   +    ++ +    +     +  +   + M     +   +  P
Sbjct: 74  VHWKSLRWLFAGTLIGMPLGMWALTQLSGDLVRVLLGVAIIGSAVAM---AAVPDRQSLP 130

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
              +  + G+ +G L+G   +GG      +++++ AS + A   ++ V   +  
Sbjct: 131 GPGLTTVTGVASGLLNGGFALGG---PPAVLMYFSASSHVAAGRASLVVFFLVI 181


>gi|311029739|ref|ZP_07707829.1| hypothetical protein Bm3-1_04154 [Bacillus sp. m3-13]
          Length = 246

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 76/214 (35%), Gaps = 16/214 (7%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + +H A+  +    + +S  SF    +   + +K+    +    I  +  +L+ S + +
Sbjct: 37  GVPIHTAIAANKFSNSFSSFTSFYTIWKKQQVQLKLGLSIVPFTIIGGISGALLASFLTE 96

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKF-PDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
             L K   +   +  IL + +      +       + Y   +  G   G  G G      
Sbjct: 97  EVLLKVALVLLFIATILNIVKSNFKKTKNTGTPTPLFYPTYIGIGAFDGLFGPGQATL-- 154

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           L+  F            AG S L +     ++ ++   ++    +S+G+ +    + +  
Sbjct: 155 LMHSFLN----------AGHSFLTSIGLTRLQTFTSCTVSFWVYFSMGYFDWRVGVALGL 204

Query: 243 ISILITPLATKLSYM---IGKKYLTIGFSMIMFT 273
            S +    A KL+     +  + +   FS+ +  
Sbjct: 205 GSFVGAQTAIKLANRLAFLPWQKILSAFSIFLIL 238


>gi|282878949|ref|ZP_06287713.1| putative membrane protein [Prevotella buccalis ATCC 35310]
 gi|281298948|gb|EFA91353.1| putative membrane protein [Prevotella buccalis ATCC 35310]
          Length = 247

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 67/166 (40%), Gaps = 17/166 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQL-MGIDDSICMHVAMGTSLGVIAPT 81
           I L+ +   ++G LS   G GGG++++P+++  + + + +       +    S  VI   
Sbjct: 11  IILLSIVGLMAGMLSSSIGFGGGMLLLPIVTSVYGIEVAVPVCTIAQLLSNASRTVIGWK 70

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S+              K L   +  +P+T  + +   S   K+ +        +L  I  
Sbjct: 71  SIE-----------WKKTLWFLLPSIPLTA-LGAYGFSIAPKNIMTIIVGFALILFAIQK 118

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
           L+    + +          + G VTGF++G L + G + + + +  
Sbjct: 119 LRGKLHFPQHP----ATMVVGGCVTGFINGMLSISGPLSSAVFLTL 160


>gi|260221286|emb|CBA29699.1| hypothetical protein Csp_A13450 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 234

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 79/233 (33%), Gaps = 21/233 (9%)

Query: 45  GLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWI 104
           G++ VP+LS A           +  A+   L +   + V     +RR    +   L+  I
Sbjct: 13  GMLAVPILSMAMS--------PVQAAV-LLLPIFVISDVAGVWLYRR--EYSRPNLRILI 61

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM 164
               +   V     S V    +     +  +   + +  RD+     + P     + WG 
Sbjct: 62  PAGIVGVGVGWATASMVSDRAIMLMIGLVGVGFCLNLWLRDQNASVAQPPHLAKGWFWGT 121

Query: 165 VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
           + GF S  +   G     + ML           TS  V A+I    ++           L
Sbjct: 122 LAGFTS-FISHAGAPPYQVYMLPQKLPKAAFAGTSTIVFAVINAAKIIPY-------QNL 173

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+S   ++  A L  +P +++       L+  +  ++      + +F  S  
Sbjct: 174 RPYSTASLHYAAWL--VPFALVGAVAGAYLTRRLADQWFYRIVQVSLFAVSIK 224


>gi|218508160|ref|ZP_03506038.1| putative permease protein [Rhizobium etli Brasil 5]
          Length = 103

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 8/111 (7%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   I +I+      G LSG+FGVG G ++ P+L           +I   V
Sbjct: 1   MTIYLPIAELSVNIFIILGMGAAVGFLSGMFGVGVGFLITPLLIFY--------NIPPVV 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
           A+ T    +  +S+   + H R GT+++K+    +        V   + S 
Sbjct: 53  AVATGANQVVASSISGAITHFRRGTLDVKLGTVLLVGGLSGATVGIWIFSL 103


>gi|183598258|ref|ZP_02959751.1| hypothetical protein PROSTU_01643 [Providencia stuartii ATCC 25827]
 gi|188020428|gb|EDU58468.1| hypothetical protein PROSTU_01643 [Providencia stuartii ATCC 25827]
          Length = 259

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 80/207 (38%), Gaps = 22/207 (10%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +V   L G +    GVGGG++++P+LS  F L  +        A+ T+  +     V S 
Sbjct: 6   LVIGALIGLVISTTGVGGGVIVLPILSYFFGLNALA-------AVATANFLSMLMKVSSS 58

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK---------------SFLNKAFA 131
             H R G I +K     + ++  +T ++SL+++ +                       F+
Sbjct: 59  YMHFRLGNIPLKGALIVLAIMLPSTFLSSLLVTWLGSLPEYTQQVERGINLLVAAAIIFS 118

Query: 132 IFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
           ++  +  +      +    ++     + +   +    L      GG +   +L+ +   +
Sbjct: 119 LYLFIHRMFFTTPIQKTTLKQHQIGAMFFPAVIAGVVLGATGVGGGVVVLPMLLRYMQLN 178

Query: 192 IYKATATSAGVSALIAFPALLVRIYSG 218
           I +A  TS  V+ +++  +       G
Sbjct: 179 IKQAIGTSIVVTTVLSGSSACAYAQDG 205


>gi|42519870|ref|NP_965800.1| hypothetical protein LJ1821 [Lactobacillus johnsonii NCC 533]
 gi|41584160|gb|AAS09766.1| hypothetical protein LJ_1821 [Lactobacillus johnsonii NCC 533]
          Length = 251

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 80/231 (34%), Gaps = 20/231 (8%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +GI        A  T+   +  T V S     +    + K +  +     + + 
Sbjct: 32  YPILLSVGIPPVY----ANTTNDAALIWTGVGSTASSLKELKGHWKEVIFYSIFTIVGSA 87

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI---WGMVTGFL 169
           +  +++         K         G+++L    ++ E+   +  ++ I     ++TG  
Sbjct: 88  LGCMLLIQFPGKIFEKIVPFCIAFSGLMILFSGEIHLEKDGNNRLLQIISLLCLVITGIY 147

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKAT-ATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +G  G   G+   +++       +    A    + AL    AL++ +++           
Sbjct: 148 AGYFGAASGVLMLVILNAISDDDFLTVNAMKNIIGALSNLVALIIYMFTAK--------- 198

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              +   + + +   +++ +    ++   I  K + +G +++    +  FA
Sbjct: 199 ---IYWDSAIPLAIGALIGSYFGPRIMRHISVKVIRLGIAVLALIQAAYFA 246


>gi|220904906|ref|YP_002480218.1| hypothetical protein Ddes_1641 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869205|gb|ACL49540.1| protein of unknown function DUF81 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 354

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 36/94 (38%), Gaps = 5/94 (5%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-- 121
              M  A+GT +  +A  S++S M H + G ++  +    +    I   + + M+  +  
Sbjct: 50  GFPMAFAIGTDVAQMAGKSLISTMRHGKFGNVDYALGITMLIGTVIGVEIGAQMVMWLER 109

Query: 122 ---DKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
                  +   + +  + +  L+     +   ++
Sbjct: 110 IGSVDKVVRWLYVVLLISIAWLVFHDAAVRRRKE 143



 Score = 35.8 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 37/123 (30%), Gaps = 7/123 (5%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L               H+A+GT L  +A + +     +   G + +      +    +
Sbjct: 213 PALVYLV-------GCPTHLAVGTDLFEVAISGLYGTASYAYKGRVELLAALIMLCGAAV 265

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
              +  +   +V    +   F +  L   + ++ +        +           V GF+
Sbjct: 266 GAQIGVVATKYVKGYGIRFVFGLAVLGCLMSVVLKLLQAEFPAWGWLLGPLATVEVLGFV 325

Query: 170 SGA 172
           S  
Sbjct: 326 SAI 328


>gi|212223964|ref|YP_002307200.1| hypothetical protein TON_0815 [Thermococcus onnurineus NA1]
 gi|212008921|gb|ACJ16303.1| conserved hypothetical protein [Thermococcus onnurineus NA1]
          Length = 85

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 1/84 (1%)

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
           MH A+GTSL VI    +  F+ +   G  I++ ++  ++    I   +       +    
Sbjct: 1   MHRAVGTSLFVIVLNGLAGFVSYELQGRAIDLVVVVLFVLGGLIGDAIGVRTAKSLSCRE 60

Query: 126 LNKAFAIFCLLMGILMLKRDRLYC 149
           L + FA   +L+ + ++  +    
Sbjct: 61  LGQVFAAVVILVALYLMWTNLPKV 84


>gi|33240170|ref|NP_875112.1| hypothetical protein Pro0720 [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|33237697|gb|AAP99764.1| Uncharacterized conserved membrane protein [Prochlorococcus marinus
           subsp. marinus str. CCMP1375]
          Length = 259

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 92/259 (35%), Gaps = 25/259 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+I+ S  S  LS L G G GL+ +P L            +    A+ T         +
Sbjct: 9   LLLIIVSITSNFLSALSGGGAGLIQLPALIFL--------GLPFSKALATHKVASVALGL 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + H +  T+  KI    +       ++ +  I  +       +  I  L +GI   K
Sbjct: 61  GASIRHYKEKTLETKITLFVLGFGLPGVLLGANTIFAIPSEIATFSLGIMTLCLGIYSSK 120

Query: 144 R--DRLYCERKFPDNYVKYIWGMV---TGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
              D+L    K   N    I   +    G L+G+L  G G+F  L ++ ++G S  +A A
Sbjct: 121 SYQDKLSYSNKSLSNQRLIIGCFILFLIGVLNGSLTSGTGLFVTLWLVKWFGLSYTRAVA 180

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  +   IA+      I  G             +    +  ++  S+    L   +  +
Sbjct: 181 YTLIL-VGIAWNGT-GAIVLGLKNE---------IQWFWLPSLIIGSLTGGYLGAHIGII 229

Query: 258 IGKKYLTIGFSMIMFTTSF 276
            G K +   F  I  T   
Sbjct: 230 KGDKLVKTLFEFISITIGI 248


>gi|289580724|ref|YP_003479190.1| hypothetical protein Nmag_1044 [Natrialba magadii ATCC 43099]
 gi|289530277|gb|ADD04628.1| protein of unknown function DUF81 [Natrialba magadii ATCC 43099]
          Length = 349

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 41/105 (39%), Gaps = 7/105 (6%)

Query: 41  GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKIL 100
           GVGGG + +P +              +  A+GTSL     +       +   G++++ ++
Sbjct: 200 GVGGGFIRMPAIHYLI-------GTPLTAAVGTSLFAGLFSGAFGTFTYGMSGSVDLTVV 252

Query: 101 KDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              +    +   + S   + V+++ +   F +  +   I +   +
Sbjct: 253 SLLLVGSALGAKIGSAATTIVEENDVIVYFGLMMVFASIGIALSE 297



 Score = 35.4 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 98/301 (32%), Gaps = 67/301 (22%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            +   F+ G L G FG+GG  ++ P L                VA+G+ L     TSV++
Sbjct: 14  FVSFGFMVGVLFGFFGMGGSFLITPTLLIL--------DYPASVAIGSGLAFYFGTSVIA 65

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA---FAIFCLLMGILML 142
            ++H   G ++ K+      VL +   + S ++  ++   + +     A   LL GI  L
Sbjct: 66  VLKHYDIGQVDYKLGAILFVVLSVGIELGSRLVFALEALGIAEVVTGIAYIVLLAGIGAL 125

Query: 143 KRDR---------------------------LYCERKFPDNYVKYIWGMVTGFLSGA--- 172
              R                               +K     V  +  + +G  +     
Sbjct: 126 FLRRAYNLENDESDANDESDTDDESDANDEIPAIGQKIQSYNVPPMISLTSGGRASVWTI 185

Query: 173 -------------LGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSG 218
                        +GVGGG      + +  G  +  A  TS                 SG
Sbjct: 186 SGAGGGVGLVSGLIGVGGGFIRMPAIHYLIGTPLTAAVGTSLFAGLFSGAFGTFTYGMSG 245

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                        V++  V ++L  S L   + +  + ++ +  + + F ++M   S   
Sbjct: 246 S------------VDLTVVSLLLVGSALGAKIGSAATTIVEENDVIVYFGLMMVFASIGI 293

Query: 279 A 279
           A
Sbjct: 294 A 294


>gi|91781966|ref|YP_557172.1| hypothetical protein Bxe_A3878 [Burkholderia xenovorans LB400]
 gi|91685920|gb|ABE29120.1| Putative membrane protein [Burkholderia xenovorans LB400]
          Length = 262

 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 88/270 (32%), Gaps = 35/270 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V+    G L GL GVGGG +M P+L   F       ++    A+GT L   A T  
Sbjct: 8   LLYSVSGLFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAIFCLLM 137
              + H   G+++ +I             +T +++             +        L+ 
Sbjct: 61  TGTLVHGLKGSVDWQITLRLAAGSVPAATLTLILLHRYGMDTPGAGRLIQIVLGAALLIT 120

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT--NLLMLF 187
            + ++ R         +    R+     +  + G V G L     VG G      LL+L+
Sbjct: 121 AVALVFRPQLAALGARKQRTPRQGRTLALTMLTGAVLGVLVSLTSVGAGAIGVTVLLLLY 180

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                 +   +    +  +              L G   W LG ++   +L +L  S+  
Sbjct: 181 PLLPTTRIVGSDIAHAVPLTL------------LAGAGHWLLGSIDWSMLLSLLVGSLPG 228

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             + + LS       L    +  +      
Sbjct: 229 IAIGSYLSSRAPDALLRNLLAATLTLVGVR 258


>gi|294679143|ref|YP_003579753.1| hypothetical protein RCAP_rcp00090 [Rhodobacter capsulatus SB 1003]
 gi|294477959|gb|ADE87346.1| membrane protein, putative [Rhodobacter capsulatus SB 1003]
          Length = 195

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 66/189 (34%), Gaps = 12/189 (6%)

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
                ++ + +          +   + +    L K  A     + +++L    +      
Sbjct: 9   AAQWPVIVNLLAGSLAGAWFGAGWATRLRSDILFKVIAALMAGIAVVLLTGHGVASGAAL 68

Query: 154 PDNYVKYIWGMVTGF----LSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAF 208
                +   G+V GF    ++  +GV GG +    L++ +GA I  A + S  VS     
Sbjct: 69  VTGGAQIGLGVVAGFAIGIVAALMGVAGGELLIPTLVILFGADIKLAGSLSLAVSLPTML 128

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
                              +LG  N   V ++   SI  + L   L  ++ +  L  G +
Sbjct: 129 VGFARY------SRDQAFATLGR-NRIFVAVMAAGSIAGSFLGGHLLGLVPEAVLLPGLA 181

Query: 269 MIMFTTSFV 277
           +I+  ++F 
Sbjct: 182 LILVISAFK 190



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 12/126 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L +VA F  G ++ L GV GG +++P L   F          + +A   SL V  PT 
Sbjct: 75  IGLGVVAGFAIGIVAALMGVAGGELLIPTLVILFGAD-------IKLAGSLSLAVSLPTM 127

Query: 83  VMSFMEHRRHGTI-----NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           ++ F  + R         N   +          + +   ++  V ++ L    A+  ++ 
Sbjct: 128 LVGFARYSRDQAFATLGRNRIFVAVMAAGSIAGSFLGGHLLGLVPEAVLLPGLALILVIS 187

Query: 138 GILMLK 143
              + +
Sbjct: 188 AFKVWR 193


>gi|209550846|ref|YP_002282763.1| hypothetical protein Rleg2_3270 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209536602|gb|ACI56537.1| protein of unknown function DUF81 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 254

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 63/203 (31%), Gaps = 15/203 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +    + A  L G   G  G    L+ +P L+           +    A    L ++ 
Sbjct: 5   LSFYYAAVPAVLLVGLAKGGMGDALSLIGLPFLALV---------VSPVEAAAILLPILV 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              ++S +  R+HG  +   LK  +        +     + V  + L     +  +L  +
Sbjct: 56  FMDMISLVIWRQHG--DWATLKIMLPGAVFGIALGWATSALVPGNMLRIVIGVVTILFCL 113

Query: 140 -LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSG---ALGVGGGIFTNLLMLFYGASIYKA 195
                       +  P    + +   + G  SG    +   GG    +  L       + 
Sbjct: 114 RYFWNNYGPGAGKIVPPRGQRPVAAGLWGTFSGYGSFVAHAGGAPFQIYALPLKLQPREY 173

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
           T TS    A++    L+     G
Sbjct: 174 TGTSVRFFAILNAIKLIPYFALG 196


>gi|192292444|ref|YP_001993049.1| hypothetical protein Rpal_4078 [Rhodopseudomonas palustris TIE-1]
 gi|192286193|gb|ACF02574.1| protein of unknown function DUF81 [Rhodopseudomonas palustris
           TIE-1]
          Length = 261

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 12/126 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   +VA F  G ++ L GV GG +++P L   F          + +A   SL V  PT 
Sbjct: 140 IIAGVVAGFAIGVVASLLGVAGGELLIPTLVLLFGAD-------IKLAGSLSLAVSLPTM 192

Query: 83  VMSFMEHRRHGTI-----NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           ++ F  + R  +      N   +        + +++ SL++  V  + L    A   +L 
Sbjct: 193 IVGFTRYSRDQSFSVMDENRSFVLVMAAGSIVGSLIGSLLLGVVPGAALLPFLAALLVLS 252

Query: 138 GILMLK 143
            I + +
Sbjct: 253 AIKVWR 258



 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 5/126 (3%)

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
             +  ++ + +    I     +   + +  + L +  AI  +++ +++L        +  
Sbjct: 74  AAHWTVVVNLLGGSLIGAWFGAGWATRLKSASLYRVIAILLVVIALVLLWGHGAAGSQPV 133

Query: 154 PDNYVKYIWGMV----TGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAF 208
                + I G+V     G ++  LGV GG +    L+L +GA I  A + S  VS     
Sbjct: 134 LSGTSQIIAGVVAGFAIGVVASLLGVAGGELLIPTLVLLFGADIKLAGSLSLAVSLPTMI 193

Query: 209 PALLVR 214
                 
Sbjct: 194 VGFTRY 199


>gi|296160230|ref|ZP_06843048.1| protein of unknown function DUF81 [Burkholderia sp. Ch1-1]
 gi|295889441|gb|EFG69241.1| protein of unknown function DUF81 [Burkholderia sp. Ch1-1]
          Length = 262

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 88/270 (32%), Gaps = 35/270 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V+    G L GL GVGGG +M P+L   F       ++    A+GT L   A T  
Sbjct: 8   LLYSVSGLFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAIFCLLM 137
              + H   G+++ +I             +T +++             +        L+ 
Sbjct: 61  TGTLVHGLKGSVDWQITLRLAAGSVPAATITLILLHRYGMDTPGAGRLIQIVLGAALLVT 120

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT--NLLMLF 187
            + ++ R         +    R+     +  + G V G L     VG G      LL+L+
Sbjct: 121 AVALVFRPQLAALGARKQRTPRQGRTLALTMLTGAVLGVLVSLTSVGAGAIGVTVLLLLY 180

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                 +   +    +  +              L G   W LG ++   +L +L  S+  
Sbjct: 181 PLLPTTRIVGSDIAHAVPLTL------------LAGAGHWLLGSIDWSMLLSLLVGSLPG 228

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             + + LS       L    +  +      
Sbjct: 229 IAIGSYLSSRAPDALLRNLLAATLTLVGVR 258


>gi|255021232|ref|ZP_05293282.1| hypothetical protein ACA_0769 [Acidithiobacillus caldus ATCC 51756]
 gi|254969347|gb|EET26859.1| hypothetical protein ACA_0769 [Acidithiobacillus caldus ATCC 51756]
          Length = 249

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 69/201 (34%), Gaps = 13/201 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
              L+     ++G ++ L G G  L + P+L  A    G+        A  ++   I   
Sbjct: 6   IYPLLFGGGLVAGFVNVLAGAGSALTL-PLLIFAGLSPGV--------ANASNRIGILAE 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + ++     R   +  ++            ++ +    H+  +   K   +      + +
Sbjct: 57  NALASRRFLRKDLVEPRVGAKLALWTLPGAILGAWSSIHLGGALFQKILVVVLAFSAVTL 116

Query: 142 LKRDRLYCE-RKFPDNYVKYIWGM--VTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
                L       P N+ + I+    + GF  G +  G G     ++  F    + K  A
Sbjct: 117 YLPPDLARRLHSLPQNHPRGIYPAMLLLGFYGGFIQAGIGFLFIFVLRAFLDLPLPKINA 176

Query: 198 TSAGVSALIAFPALLVRIYSG 218
               + A    P+LLV ++ G
Sbjct: 177 HKTFIIATYTLPSLLVFLWLG 197


>gi|253582887|ref|ZP_04860105.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
 gi|251835093|gb|EES63636.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
          Length = 261

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 82/215 (38%), Gaps = 20/215 (9%)

Query: 74  SLGVIAPTSVMSFMEHRRHGTI--NMKILKDWIFVLPITTVVTSLMISHVD--------K 123
           S   +   S++S  +  ++ TI  N +I         +  +   +M   V          
Sbjct: 46  SGCTVLSMSIISVAKAIKNTTIKINTRITTWLALGSVLGGMSGKVMFQTVKEILQNENKT 105

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
             +     IF  L  ++   +        F + ++ ++ G++ G  S  LG+GGG    +
Sbjct: 106 GAVQSIVMIFITLGTLIYTAKKSQIKTHHFKNKFLCFVIGVILGIFSSFLGIGGGPINLV 165

Query: 184 LML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           +++ F+  +  +A   S  +       +LL  I++   +  +    LG + +G V   + 
Sbjct: 166 ILIFFFSMTTKEAAINSIYIILFSQIASLLHTIFA-RKIPDVSILYLGLMVLGGVCGGIA 224

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            SI        ++  I ++ +   F  +M    F+
Sbjct: 225 GSI--------VNKKISEEKVDKLFMGLMLVIVFI 251


>gi|262275297|ref|ZP_06053107.1| conserved hypothetical protein [Grimontia hollisae CIP 101886]
 gi|262220542|gb|EEY71857.1| conserved hypothetical protein [Grimontia hollisae CIP 101886]
          Length = 1247

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 40/143 (27%), Gaps = 21/143 (14%)

Query: 45  GLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR------RHGTINMK 98
           G V V +L     + G      + +AM  ++  I   S+      R              
Sbjct: 74  GTVFVAILLSNL-IFGDAPGQSIQLAMA-NIATIIAGSLSLAYISRIDEPFLSLKAFGWF 131

Query: 99  ILKDWIFVLPITTVVTSL---------MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
           ++   +    I  +             + + V   +L     I  +   I  L + +   
Sbjct: 132 VVATVLISPAIGALFGGWTLHLTLSVPLETVVSAWYLGDVIGILAITPLIYTLLQRK--- 188

Query: 150 ERKFPDNYVKYIWGMVTGFLSGA 172
            +  P  + K    +    +S  
Sbjct: 189 -QGLPSTFYKPTTALTIIAISAL 210


>gi|332296162|ref|YP_004438085.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
 gi|332179265|gb|AEE14954.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
          Length = 116

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 8/122 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + +V    +G +SG+ GVGGGLVM+P +           SI   +A G SL  I P S
Sbjct: 3   VIIFLVIGLFTGIVSGMMGVGGGLVMIPAMVLLM-------SIPQSMAQGISLAAIVPIS 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +M    H + G +    +        +   +TS +I ++  + L   F++      + M+
Sbjct: 56  LMGAWVHFKKGGLKKDAI-WIGLGAVLGASITSSIIPYIPINALKIIFSLVLFYFALRMI 114

Query: 143 KR 144
            +
Sbjct: 115 LK 116


>gi|85708418|ref|ZP_01039484.1| hypothetical protein NAP1_04245 [Erythrobacter sp. NAP1]
 gi|85689952|gb|EAQ29955.1| hypothetical protein NAP1_04245 [Erythrobacter sp. NAP1]
          Length = 247

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 64/194 (32%), Gaps = 12/194 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L+    F++  L    G GGG       S    L G+D  +   V    SL      
Sbjct: 1   MILLLAGGFFVTALLYASVGFGGGS----TYSALLALAGLDYRVLPLV----SLACNIVV 52

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              + +   R G    K       +      +  LM   +D++          +L  + M
Sbjct: 53  VSGASIRFARSGVTPWKGAIALTALAAPAAFIGGLMP--IDRNSFLLLLGASLVLTALTM 110

Query: 142 LKRDRLYCERKFPD-NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT-ATS 199
           L   R          +          GFL+G +G+GGGIF   L+        +A  AT+
Sbjct: 111 LIPVREDDTSVPNRFSKAMPFVAAPIGFLAGLVGIGGGIFLAPLLHLTRWRDARAIAATA 170

Query: 200 AGVSALIAFPALLV 213
           +    + +   L  
Sbjct: 171 SLFILVNSLFGLAG 184


>gi|239940974|ref|ZP_04692911.1| hypothetical protein SrosN15_08265 [Streptomyces roseosporus NRRL
           15998]
 gi|239987452|ref|ZP_04708116.1| hypothetical protein SrosN1_09124 [Streptomyces roseosporus NRRL
           11379]
          Length = 263

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 49/159 (30%), Gaps = 11/159 (6%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+  V    +  + +   R   + + +      +    ++  +   + +    L    
Sbjct: 50  LGTNKAVAIVGTSGAAVTFLRKAPVRVGLAVRIGLMALAGSMTGAFFAAGISSEVLRPVI 109

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKY----------IWGMVTGFLSGALGVGGGIF 180
            +  L +   ++ R                          + G   GF  G  G G G F
Sbjct: 110 MVVLLGVAAFVMLRPSFGTAAAGDGTGRPVARARIITAIVLVGGGIGFYDGLFGPGTGTF 169

Query: 181 TNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
             L +       +  A+AT+  V+      AL +  Y G
Sbjct: 170 LVLGLTAVLHLDLVTASATAKIVNVCTNAGALAMFAYQG 208


>gi|114705624|ref|ZP_01438527.1| Predicted permease [Fulvimarina pelagi HTCC2506]
 gi|114538470|gb|EAU41591.1| Predicted permease [Fulvimarina pelagi HTCC2506]
          Length = 244

 Score = 41.6 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 89/250 (35%), Gaps = 27/250 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I+ASF +  L+  F +GGG+ ++ V+S A             +A+   L  +   +  +
Sbjct: 9   LIIASFFTSALTAAFALGGGVTLLAVMSLALP-----------IAVLIPLHGVVQFASNA 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
                +  ++       +I    I   + +  +  + +  L      F L    L L   
Sbjct: 58  GRLGIQRRSVRWDKALPFILGGLIGAAIGAKTVVTLPEEILRLLLGTFILATIFLKL--- 114

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
                     ++   + G VT FLS  +G   G    +L         +  AT A V+A 
Sbjct: 115 ---PSLGRLKDWQYGLAGAVTTFLSMFIGA-SGPLNAVLFTRAFKDRKQVVATMASVTAS 170

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
                +   + +G     L P++L          ++    L T   T+L   + ++    
Sbjct: 171 QHALKVAAFLAAGV---ALGPYAL------LAAAMIATGFLGTLAGTRLLNHLDERLFRR 221

Query: 266 GFSMIMFTTS 275
             ++++   +
Sbjct: 222 LLAVMLSVLA 231


>gi|302669188|ref|YP_003832338.1| hypothetical protein bpr_III067 [Butyrivibrio proteoclasticus B316]
 gi|302396852|gb|ADL35756.1| hypothetical protein bpr_III067 [Butyrivibrio proteoclasticus B316]
          Length = 236

 Score = 41.6 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 3/97 (3%)

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           PT+++   + RRH  I++KI      ++ + ++     + + D S +   F +   L+G 
Sbjct: 48  PTNLIISWKERRH--IDLKICIPLSLMVIVGSLGGVFFLKNADVSVIKIIFGVLVALVGA 105

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
            ML R+    + K     +  I G+V+G L G  GVG
Sbjct: 106 EMLVRELPQRQAK-SSKLLLTIIGIVSGVLCGLYGVG 141


>gi|295111473|emb|CBL28223.1| Predicted permeases [Synergistetes bacterium SGP1]
          Length = 259

 Score = 41.6 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 67/193 (34%), Gaps = 14/193 (7%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           FL G +  + G GGGL+ +P    A         + +H A+GT+       + ++   + 
Sbjct: 23  FLGGFVDAITG-GGGLITLPAYLFA--------GLPVHFALGTNKLSSCIGTALTTARYA 73

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           R G I  K+    +    + + + + +   ++             +  + +LK   L  +
Sbjct: 74  RAGFIPWKLACLCVAASLMGSNLGAHLALFLNDRIFKFVMLFLLPVTALYVLKGRALVHQ 133

Query: 151 RKFPDNYVKYIWGMVT----GFLSGALGVGGGIFTNLLMLFYGASIYK-ATATSAGVSAL 205
           R         +         G   G  G G G F  LL+          A   +  ++  
Sbjct: 134 RPPLPQARTVLTSAAIAFALGAYDGFYGPGAGTFMLLLLAAAAHLSLNTANGVAKSINMA 193

Query: 206 IAFPALLVRIYSG 218
               AL V + +G
Sbjct: 194 SNLAALTVFLING 206


>gi|161170225|gb|ABX59196.1| putative protein [uncultured marine group II euryarchaeote
           EF100_57A08]
          Length = 273

 Score = 41.6 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +   +    L+  +    G+GGG++ VP L              +H+++  SL +I   S
Sbjct: 3   VFYALAVILLTAFMFAPLGLGGGILFVPTLHYILGWD-------LHLSIVGSLILIWFVS 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV 121
           + S   H   G    +I +          ++ +L    +
Sbjct: 56  IGSRRAHDEGGYTVAEIGRRGRLFAIGGAILGALAADIL 94


>gi|89896420|ref|YP_519907.1| hypothetical protein DSY3674 [Desulfitobacterium hafniense Y51]
 gi|89335868|dbj|BAE85463.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 256

 Score = 41.6 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 92/272 (33%), Gaps = 25/272 (9%)

Query: 6   YNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSI 65
           Y   ++      C V  +   +V    +G    L      ++++PVL+ AF         
Sbjct: 7   YFLHMLDLTRIQCAVVMLTAFLVGFSKTGVSGVL------MLVIPVLASAFGGKD----- 55

Query: 66  CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
               + G  L ++    V +   +R+  +I+ K +   +    I     +++   +D   
Sbjct: 56  ----STGILLPILLVGDVFAVWSYRK--SIDWKKVFAPLPWALIGLFTGAVVGRIIDDQV 109

Query: 126 LNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
                 +  L    +++  +++      P     Y+   +    +  +G   G   ++ +
Sbjct: 110 FIILIGVIILFCLGILVYTEKMGKNFTVPTGTWFYVTAGILSGFATMIGNAAGPIFSVYL 169

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           L  G        T+A    +I    + V+I++ W   GL  + L  V +  V        
Sbjct: 170 LALGLQKNDFMGTAALFFFIINSLKVPVQIFA-WHNMGLQSFLLAGVMLPMVA------- 221

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L   L   +   I +K        +   ++  
Sbjct: 222 LGAALGLFVIKKINEKIFRYLIICMTALSALR 253


>gi|294810913|ref|ZP_06769556.1| putative membrane protein [Streptomyces clavuligerus ATCC 27064]
 gi|326439454|ref|ZP_08214188.1| hypothetical protein SclaA2_00260 [Streptomyces clavuligerus ATCC
           27064]
 gi|294323512|gb|EFG05155.1| putative membrane protein [Streptomyces clavuligerus ATCC 27064]
          Length = 257

 Score = 41.6 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 68/229 (29%), Gaps = 17/229 (7%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
             +     +    A    L ++A TS+ +   H R G +  +    +     +       
Sbjct: 31  PALIYPLGLNPAAATTAGLIIVAATSLTALFAHARAGNVRWRTGALFAAAGMLPAAAAGA 90

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDR------LYCERKFPDNYVKYIWGMVTGFLS 170
             + + +  L  AF++   +  +LML+R                   V      +     
Sbjct: 91  AAARLPEPVLTAAFSLVAAVAAVLMLRRPASGEGAEGTGGGAGGPGRVAGTGAGLGALTG 150

Query: 171 GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
                GG +    L+      +  A  TS     +I+  +L      G    G       
Sbjct: 151 LLGVGGGFLAVPALVTVVALEMQAAVGTSL---LVISANSLASLAARGGTAAG------- 200

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            V+   +      +IL      +L+       L   F++++   +   A
Sbjct: 201 -VDWAVIAPFAGAAILGAWDGRRLAAKASGALLRRVFAVLLLAVAAFMA 248


>gi|325181581|emb|CCA16031.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 421

 Score = 41.2 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 52/160 (32%), Gaps = 23/160 (14%)

Query: 99  ILKDWIFVLPITTVVTSLMISHVDK------------SFLNKAFAIFCLLMGILMLKRDR 146
           I   W+ ++ I+ V      + +              +F+   F          +LK+  
Sbjct: 257 ISLTWLSLIVISLVKGGHGAASIVGIGCGSYSYWAVITFMPYVFCAITAYFAQRILKQRA 316

Query: 147 LYCERKFP-----------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
                 +                  I+  + G  +G LG+GGG+    ++L        A
Sbjct: 317 FLESYDYRYAEGEMRWDRRGVVRYPIFCSLAGVAAGMLGIGGGMVKGPILLEIRFHPQVA 376

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIG 235
           +ATS+ +    +   ++     G   + + P     V+ G
Sbjct: 377 SATSSTMIFFTSSTTVIQEALIGHKHSTMAPLDFLLVSWG 416



 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 8/51 (15%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           L+G  +G+ G+GGG+V  P+L +              VA  TS  +I  TS
Sbjct: 346 LAGVAAGMLGIGGGMVKGPILLEI--------RFHPQVASATSSTMIFFTS 388


>gi|266622558|ref|ZP_06115493.1| putative membrane protein [Clostridium hathewayi DSM 13479]
 gi|288865709|gb|EFC98007.1| putative membrane protein [Clostridium hathewayi DSM 13479]
          Length = 265

 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 68/186 (36%), Gaps = 18/186 (9%)

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVD---------KSFLNKAFAIFCLLMGILMLKRD 145
           I+MK          I  VV   M   +           +       I  L   I  LK+D
Sbjct: 73  IDMKTGTPLAIGAAIGGVVGKSMFQALSNMFANKDMVGAVQAGCLLIITLGTLIYTLKKD 132

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL 205
           ++       +  V  I G+V G  S  LG+GGG    +++ ++  S+     T+A  S  
Sbjct: 133 KIKTL-HVTNAVVCIIIGVVLGIFSSFLGIGGGPINLVVLFYF-FSMET--KTAAQNSLY 188

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           I   + +  + +      +P +++       + +++   IL       ++  I  K +  
Sbjct: 189 IILFSQITSLINSLVTRTVPEFTI-----WLLALMVIGGILGGMSGRSINKKIDSKVVDK 243

Query: 266 GFSMIM 271
            F  +M
Sbjct: 244 LFIFLM 249


>gi|256044944|ref|ZP_05447847.1| hypothetical protein Bmelb1R_10655 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|260565457|ref|ZP_05835941.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260151525|gb|EEW86619.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
          Length = 190

 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 63/182 (34%), Gaps = 18/182 (9%)

Query: 101 KDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY 160
                   + +V+ +L+ + +  + +  A  +  + + I    +  L    +       +
Sbjct: 7   WPEALASLLGSVLVALLATVLPVNIMRAALPMLLIAIAIYFALKPSLGDVDRA-RRIGPF 65

Query: 161 IWGM----VTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
           ++G+    + GF  G  G G G  F    + F G  + KATA +  ++       L    
Sbjct: 66  LFGVTLVPLIGFYDGLFGPGTGSFFMLAFVAFAGYGVLKATAHTKLLNCASNIGGLATFA 125

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                       ++G +N    + +     +   +  +L+  IG + +     ++    +
Sbjct: 126 ------------AVGVINWKIGISMGIAQFIGAQIGARLAMKIGSRIIKPLLIVVSLALA 173

Query: 276 FV 277
             
Sbjct: 174 GR 175


>gi|167948836|ref|ZP_02535910.1| hypothetical protein Epers_20902 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 249

 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 17/187 (9%)

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL-----YC 149
           +        +       ++ + +I  V       A  I  L +G+  L +  L       
Sbjct: 68  LEWWFSLFLLLSGIPGVILGASLILRVPDRVAEVALGILTLGLGVYSLLKRSLGQEYCPA 127

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAF 208
            R  P   +  +     GFL+G+L  G G+F  L ++ ++G     A A +  +      
Sbjct: 128 HRDLPGYLLGGLGLFCIGFLNGSLTSGTGLFVTLWLVRWFGMDYRTAVAHTLVL------ 181

Query: 209 PALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFS 268
              +   ++G G   L    LG +    + ++L  S+L   L   LS     +++   F 
Sbjct: 182 ---VGMFWNGSGALTLSL--LGEIQWEWLPVLLAGSLLGVYLGAHLSITKANRWIKRAFE 236

Query: 269 MIMFTTS 275
           +      
Sbjct: 237 VFTLPVG 243


>gi|300362729|ref|ZP_07058904.1| permease [Lactobacillus gasseri JV-V03]
 gi|300353157|gb|EFJ69030.1| permease [Lactobacillus gasseri JV-V03]
          Length = 253

 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 87/264 (32%), Gaps = 27/264 (10%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
               +I    L G LS +  +   L   PVL       GI        A  T+   +  T
Sbjct: 6   LFIYLIFGGILGGLLSTIASM-ASLATYPVLLSV----GIPPVY----ANTTNDAALIWT 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            V S     +    + K +  +     I + +  +++         K         G+++
Sbjct: 57  GVGSTASSLKELKGHWKQVSFYSIFTIIGSALGCMLLIQFPGKIFEKIVPFCIAFSGLMI 116

Query: 142 LKRDRLYCERKFPDN-----YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
           L    ++   +          +  +  ++ G  +G  G   G+   +++       +   
Sbjct: 117 LFSGEIHLGNESDHPNRLVQALSLLCLLIAGAYAGYFGAASGVLMLVILNAISDDAFLTV 176

Query: 197 -ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            A    + AL    AL++ +++              +   A + +   +++ +    ++ 
Sbjct: 177 NAMKNIIGALSNLVALIIYMFTEK------------IYWSAAIPLAIGALIGSYFGPRIM 224

Query: 256 YMIGKKYLTIGFSMIMFTTSFVFA 279
             I  K + +G +++    +  FA
Sbjct: 225 RHIPVKIIRLGIAVLALIQAAYFA 248


>gi|85703906|ref|ZP_01035009.1| hypothetical protein ROS217_12946 [Roseovarius sp. 217]
 gi|85671226|gb|EAQ26084.1| hypothetical protein ROS217_12946 [Roseovarius sp. 217]
          Length = 235

 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 67/194 (34%), Gaps = 17/194 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V+ + ++ +  F+S  + G  G+G  L++ P+       +G+     + V +     +I 
Sbjct: 3   VELLLILSLIVFVSAFVQGAIGIGFALIVAPI-------IGLMRPDLLPVTL-----LIL 50

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              + S +  R    ++    K         T     +++ +  S L+ A   F ++   
Sbjct: 51  MLPLNSLVAWRERPHVDWNGAKWITVGRFAGTFAGLWLLAALSASQLDLAVGWFTIIAAG 110

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L           P+       G+ TG    + G+GG     L     G  +    A  
Sbjct: 111 AALFARPFD-----PNKPTALGVGLFTGITETSTGIGGPPLALLYQHASGPVLRSTVAVC 165

Query: 200 AGVSALIAFPALLV 213
             V  +++   L  
Sbjct: 166 FLVGEVLSLIVLAG 179


>gi|254425503|ref|ZP_05039220.1| hypothetical protein S7335_69 [Synechococcus sp. PCC 7335]
 gi|196187926|gb|EDX82891.1| hypothetical protein S7335_69 [Synechococcus sp. PCC 7335]
          Length = 88

 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 33/69 (47%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             I M  A+GTSL +IA  S + FM +    +I+  +   +     + TV+ S +   ++
Sbjct: 6   SQIPMKTAVGTSLLIIALNSAVGFMGYLDQVSISWGLTLSFTLAAGLGTVLGSQLSKSIE 65

Query: 123 KSFLNKAFA 131
            S L K F 
Sbjct: 66  ASKLQKGFG 74


>gi|223935566|ref|ZP_03627482.1| protein of unknown function DUF81 [bacterium Ellin514]
 gi|223895574|gb|EEF62019.1| protein of unknown function DUF81 [bacterium Ellin514]
          Length = 312

 Score = 41.2 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 29/76 (38%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            I  H+A+GT L  I  ++    + H   G +++ I         I   + + +  +   
Sbjct: 224 GIPTHIAVGTDLFEIIISAGYGTVTHALKGNVDILIALVMHTGAAIGAQIGATLTQYFAG 283

Query: 124 SFLNKAFAIFCLLMGI 139
             +  AF    ++  I
Sbjct: 284 PRIRLAFIPLPIIGAI 299



 Score = 35.4 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + M++ +GT L  I   S+++  +HR  G I++++    +          + +I  + K
Sbjct: 45  GVPMNIVVGTDLAHIVGKSIVAARKHRTLGNIDLRLGGLMVIGTIAGVEAGAQLIQELKK 104

Query: 124 SF---LNKAFAIFCLLMGI 139
           S    +    +   +L+GI
Sbjct: 105 SAHIDMAVGISFIVILVGI 123


>gi|283852426|ref|ZP_06369695.1| protein of unknown function DUF81 [Desulfovibrio sp. FW1012B]
 gi|283572164|gb|EFC20155.1| protein of unknown function DUF81 [Desulfovibrio sp. FW1012B]
          Length = 353

 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 7/163 (4%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M+ L    +     L I  SF +G ++G+ G+GGGL+ +P L               HVA
Sbjct: 174 MIHLEVAGIYCSAWLPIAVSFFTGWMAGILGIGGGLIRMPALIYLV-------GCPTHVA 226

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT L  +A + +     +   G   +      +    +   V ++   ++    +  AF
Sbjct: 227 VGTDLFEVAISGLYGAASYTYKGRTELVAAIVMLIGAAMGAQVGAVATKYIKGYGIRIAF 286

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGAL 173
            +  +   + +L +              +    ++ G +S   
Sbjct: 287 GLAVIGCAVSILLKLIPVYIPSVSYICNEIATYLILGLVSAMA 329



 Score = 35.4 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GG  ++ P L+             M  A+GT +  +A  S++S M H + G ++ K+   
Sbjct: 37  GGAWMVTPGLNIL--------GFPMAFAIGTDIAHMAGKSLISTMRHGKFGNVDYKLGFI 88

Query: 103 WIFVLPITTVVTSLMISHV 121
            +F       V + MI  +
Sbjct: 89  MLFGTIAGFEVGAQMIMWL 107


>gi|223998204|ref|XP_002288775.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975883|gb|EED94211.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 385

 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 5/117 (4%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
              +  ++  V GF +G  G+GGGI    LM+  G     A+ATSA +    +F A    
Sbjct: 267 STIIYPLFSTVAGFCAGMFGIGGGIVKGPLMIMMGVHPAVASATSACMILFTSFTATTTF 326

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
              G  ++      +    I   +       + T L  K S        +IGF +++
Sbjct: 327 AVYGLLVHDYAIACV----ILGFVATAVGQTITTRL-LKKSRRNSYIAFSIGFVVLL 378



 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 21/127 (16%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  + S ++G  +G+FG+GGG+V  P++     +MG+  +    VA  TS  +I  TS 
Sbjct: 269 IIYPLFSTVAGFCAGMFGIGGGIVKGPLMI----MMGVHPA----VASATSACMILFTSF 320

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK---------AFAIFC 134
            +      +G     ++ D+     I   V + +   +    L K         +     
Sbjct: 321 TATTTFAVYGL----LVHDYAIACVILGFVATAVGQTITTRLLKKSRRNSYIAFSIGFVV 376

Query: 135 LLMGILM 141
           LL  +LM
Sbjct: 377 LLSALLM 383


>gi|307546831|ref|YP_003899310.1| hypothetical protein HELO_4241 [Halomonas elongata DSM 2581]
 gi|307218855|emb|CBV44125.1| K07090 [Halomonas elongata DSM 2581]
          Length = 253

 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 80/242 (33%), Gaps = 32/242 (13%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           G F  G G + VP+++ A   +     +   +       V+   +V ++         + 
Sbjct: 31  GGFAGGFGTLSVPLMALAIGPIEAAGLLLPLL------LVMDLFAVRAWWGQH-----DA 79

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY 157
             ++  +  + +  V  +L+I  +D+  +     +  LL    M+ +       +   + 
Sbjct: 80  TEVRRLLPGMALGVVAGTLLIGSLDEDHVRLLLGVVSLLFVAYMIVKP---AAARPIHSL 136

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
             +  GM  G  S     G        M  Y      +           AF A     ++
Sbjct: 137 WAWPAGMGVGLTSFLAHAG-----APPMNLYLVPRRLSKP---------AFIATCTLSFA 182

Query: 218 GWGLNGLPPWS-LGFVNIG---AVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
              L  LPP+  LG +N+    A L ++P++         L   + ++       + M  
Sbjct: 183 AVNLMKLPPYLWLGEINLTSAWASLALVPVAWFGVRSGLWLQSRVNERLFYRLVILAMAI 242

Query: 274 TS 275
             
Sbjct: 243 VG 244


>gi|213026643|ref|ZP_03341090.1| hypothetical protein Salmonelentericaenterica_31025 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 135

 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 9/117 (7%)

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
             L +   I  + +G+  L   +L  E   R+        I G   GF  G  G   G F
Sbjct: 1   DILRQILPILVIFIGLYFLLMPKLGEEDRQRRLYGLPFALIAGGCVGFYDGFFGPAAGSF 60

Query: 181 TNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
             L  +   G ++ K+TA +  ++A      LL+ I  G  +     W+ GFV +  
Sbjct: 61  YALAFVTLCGYNLAKSTAHAKVLNATSNVGGLLLFIIGGKVI-----WATGFVMLVG 112


>gi|88797379|ref|ZP_01112969.1| putative integral membrane protein [Reinekea sp. MED297]
 gi|88780248|gb|EAR11433.1| putative integral membrane protein [Reinekea sp. MED297]
          Length = 254

 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 89/250 (35%), Gaps = 24/250 (9%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I A  + G   G FG    +V VP++S          ++   VA    L ++    +++ 
Sbjct: 13  IPAVLIFGMAKGGFGGAVSIVSVPLMSL---------AVSPPVAAAILLPILCVMDLLAL 63

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
            ++     +    LK  I    +   + +L   ++ ++ +        L+  +   ++ +
Sbjct: 64  KKYWGQWHVL--NLKIMIPGALVGIFIGALTFRYLSEAHIRILIGGIALVFALYFWRK-Q 120

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGV-GGGIFTNLLMLFYGASIYKATATSAGVSAL 205
           +  +   P       WG V+GF S   G+  GG   ++ +L           T+A + A+
Sbjct: 121 VSGKVSQPSVVKGSFWGTVSGFTS--FGIHAGGPPVSVYLLPQKLHPSIYVGTNAVLFAV 178

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           I +  L+   + G              N+   L++LP++ +   L       +       
Sbjct: 179 INYVKLIPYFWLGQLNTA---------NLTTSLVLLPLAPIGIGLGVWAHNRVSSFVFYR 229

Query: 266 GFSMIMFTTS 275
             +  +    
Sbjct: 230 VINFFLMLAG 239


>gi|294948280|ref|XP_002785684.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239899707|gb|EER17480.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 392

 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 33/88 (37%)

Query: 132 IFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
           +  +LM +  L    +                +  GF++  +G GGG     L+L+   +
Sbjct: 228 VCIMLMAVPGLFVVAIKSAAMLKLAVKLSGAMLCIGFIAALVGQGGGSLITPLLLYMELN 287

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGW 219
             +A AT + V  + +    L     G+
Sbjct: 288 PQQAAATGSVVMLITSSSLALSFGLGGF 315


>gi|120603243|ref|YP_967643.1| hypothetical protein Dvul_2200 [Desulfovibrio vulgaris DP4]
 gi|120563472|gb|ABM29216.1| protein of unknown function DUF81 [Desulfovibrio vulgaris DP4]
          Length = 343

 Score = 41.2 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/123 (10%), Positives = 37/123 (30%), Gaps = 9/123 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +  +F+    + + G+ G  +++P             S        T+         
Sbjct: 40  LLPVCVAFVVSFFASMGGISGAFLLLPFQMSVLGYTAPSVS-------ATNQFYNIVAIP 92

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM-ISHVD-KSFLNKAFAIFCLLMGILM 141
                + R G +   ++   +       +V + + +  +           +  L +G  M
Sbjct: 93  SGVARYIREGRMVWPLVWVVVAGTLPGVLVGAFLRVRWLPDARDFKLFVGLVLLYIGFRM 152

Query: 142 LKR 144
           ++ 
Sbjct: 153 VRD 155


>gi|116672376|ref|YP_833309.1| hypothetical protein Arth_3834 [Arthrobacter sp. FB24]
 gi|116612485|gb|ABK05209.1| protein of unknown function DUF81 [Arthrobacter sp. FB24]
          Length = 252

 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 62/171 (36%), Gaps = 17/171 (9%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP L            +    A+ TSL V+  +S+ + +   R G IN  ++     
Sbjct: 24  IIAVPALVY-------GVGLSPAEAIPTSLVVVGLSSLAALLPRLREG-INWPVVLLVGA 75

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY----I 161
                    + +   +D + L  AFA   ++ G+ ML R +             +     
Sbjct: 76  AGIPAAWGGAAVGRLLDPNVLMLAFAGIMVVAGVRMLMRTKELEGSCSTGPARAFRSCAP 135

Query: 162 WGMVTGFL-----SGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
             +  G L           GG + T  L LF G  + +A A+S  +  + +
Sbjct: 136 KAVGVGLLVGFLTGLLGVGGGFLITPALTLFLGLRMKQAVASSLAIIVINS 186


>gi|307298619|ref|ZP_07578422.1| protein of unknown function DUF81 [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306915784|gb|EFN46168.1| protein of unknown function DUF81 [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 243

 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 88/234 (37%), Gaps = 23/234 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I LI +A   +G ++ + G GG +V +P+L            I   VA  T+   +   S
Sbjct: 6   IVLIYLAGVAAGFMNVIAG-GGSMVTLPLLMWI--------GIPPPVANATNRLGVLFES 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +        G    K +   I    I +V+ S+ +S + K  L +  A+  L + +L+L
Sbjct: 57  AIGMKTFHSSGIRLQKSIVPAIVFSTIGSVIGSMFVSSIPKDLLERVIALMLLAVAVLVL 116

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAG 201
            +         P   +  +  +  GF  G L  G G F    +   YG  + K       
Sbjct: 117 LKPG-KPNISKPSQLLTALIFLGVGFYGGFLQAGVGFFLIGAITLTYGYDLVKTNFAKVV 175

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +  +    AL+V +            S G +     L++   +++    A KLS
Sbjct: 176 IVFVYTVFALVVFL------------SKGMIYWVPGLVLAAGNVIGAYFAVKLS 217


>gi|126435519|ref|YP_001071210.1| hypothetical protein Mjls_2940 [Mycobacterium sp. JLS]
 gi|126235319|gb|ABN98719.1| protein of unknown function DUF81 [Mycobacterium sp. JLS]
          Length = 255

 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 75/260 (28%), Gaps = 36/260 (13%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC-MHVAMGTSLGVIAPT 81
           + LI +A   +G ++ + G G  L+  P L       G       M  A+G     +   
Sbjct: 1   MVLIALAGVGAGAINAIVGSGT-LITFPTLVAL----GYPPVTATMSNAVG-----LVAG 50

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            V     +RR        L+  I    +  +  + ++ H+ +        +  +   IL+
Sbjct: 51  GVSGTWGYRRELRGQWHRLRWQIPGSLLGAMAGAWLLLHLPEKVFIAIVPVLLIAALILV 110

Query: 142 LKRDRLYCERKFPDN--------------YVKYIWGMVTGFLSGALGVGGGIFTNLLM-L 186
           +   R+    +                      I   + G   G      GI    +M  
Sbjct: 111 IVGPRIQAWARQRSESAGRSLDHISRGRMAALVIGTFLVGVYGGYFTAAQGILLIAVMGA 170

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
                + +  A    +S ++   A +      +            ++  A  +I   S+L
Sbjct: 171 LLPEDMQRMNAAKNLLSLIVNVVAAVAYTLVAFDR----------ISWAAAGLIAVGSLL 220

Query: 247 ITPLATKLSYMIGKKYLTIG 266
              L       +    L   
Sbjct: 221 GGFLGAHYGRRLSPNALRAV 240


>gi|145631321|ref|ZP_01787093.1| hypothetical protein CGSHi22421_01337 [Haemophilus influenzae
           R3021]
 gi|144983106|gb|EDJ90606.1| hypothetical protein CGSHi22421_01337 [Haemophilus influenzae
           R3021]
          Length = 122

 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 57/124 (45%), Gaps = 9/124 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + ++    F++  +  + G GGGL+ +P L     + G+  +    +A+GT+     
Sbjct: 5   IDLLAILFCVGFVASFIDAIAG-GGGLITIPALL----MTGMPPA----MALGTNKLQAM 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ + +   R   +N++ +   +  + + + + +L+I  +D +   K      L +G+
Sbjct: 56  GGALSASLYFLRKRAVNLRDIWFILIWVFLGSALGTLLIQSIDVAIFKKMLPFLILAIGL 115

Query: 140 LMLK 143
             L 
Sbjct: 116 YFLF 119


>gi|308176794|ref|YP_003916200.1| hypothetical protein AARI_10120 [Arthrobacter arilaitensis Re117]
 gi|307744257|emb|CBT75229.1| conserved hypothetical membrane protein [Arthrobacter arilaitensis
           Re117]
          Length = 271

 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 83/237 (35%), Gaps = 26/237 (10%)

Query: 40  FGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKI 99
            G GGGL+ +P L            +    A+ T+       +  S + + R  + ++K 
Sbjct: 37  VG-GGGLIQLPALLLF-------PGVTPVQALATNKLGSIFGTTTSAVTYYRRTSPDLKT 88

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN--- 156
                          + + + +    +        + + +  + + +     +       
Sbjct: 89  AIPMAITAMAGAFGGAALATILPAEAIQPIIIAALIAVLLFTILKPKAGELSRLRYTGRA 148

Query: 157 --YVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
                 + G+V G   G +G G G      ++   G +  +++A +  V+      ALL+
Sbjct: 149 HYLRAIMIGLVIGGYDGMIGPGTGSFLIIAMVTVLGYNFLQSSAKAKIVNLCTNMGALLL 208

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
            + +G  L GL             L +  +++L   L  +++   G  ++ I F ++
Sbjct: 209 FVPTGHVLVGLG------------LAMGVMNMLGGYLGARMAISKGSAFIRIVFVIV 253


>gi|310777869|ref|YP_003966202.1| protein of unknown function DUF81 [Ilyobacter polytropus DSM 2926]
 gi|309747192|gb|ADO81854.1| protein of unknown function DUF81 [Ilyobacter polytropus DSM 2926]
          Length = 250

 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 59/188 (31%), Gaps = 9/188 (4%)

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
                + +KIL   +       ++   +   V  +       I  L+  + +L   +   
Sbjct: 69  YYKRHMEIKILLKLLPWAIFGVMIGLFVGGLVSDAQFKMIIGIIVLI-CVFLLIAKKDSL 127

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
                + +  +I   + G  S  +G   G    +  L    S  +   T +    ++   
Sbjct: 128 SNYLSEKWYFHIVMGILGGFSSMIGNAAGPIMVVYFLSMNLSKNRFIGTMSWFFFVLNLI 187

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            L +  +  W    L  + L        L+I P+ ++   +  ++   + +K   +    
Sbjct: 188 KLPLYAFV-WHNITLESFQLN-------LMIFPLILVGAFIGVRVVKFVPEKSYRLMMIG 239

Query: 270 IMFTTSFV 277
           +    +  
Sbjct: 240 VTIIGAAR 247


>gi|295688357|ref|YP_003592050.1| hypothetical protein Cseg_0927 [Caulobacter segnis ATCC 21756]
 gi|295430260|gb|ADG09432.1| protein of unknown function DUF81 [Caulobacter segnis ATCC 21756]
          Length = 259

 Score = 41.2 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 64/189 (33%), Gaps = 9/189 (4%)

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           G +       +     +  ++ + +   +    L   FA+    +G+ ML+  R   +  
Sbjct: 71  GRVKWPCALTFGAPGLVGALLGAQIAKTLPAQHLLAWFAVAMAAVGLSMLRAPRSPGDPD 130

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
              +  K +     G L+G      GI    L+     +       + G++   A  + L
Sbjct: 131 VRIDPAKAMKLAPIGLLTGLAAGFFGIGGGFLIAPGLMA-------ATGMTLANAAASSL 183

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL--TIGFSMI 270
           V +            + G V+    L ++    +      KL+ ++  + L     F+ +
Sbjct: 184 VSVTLFGAATSASYAASGLVDWPVFLAVVAGGGVGVLAGAKLAPLMASRVLLARRLFAGM 243

Query: 271 MFTTSFVFA 279
           +  T+   A
Sbjct: 244 IVVTAVYVA 252


>gi|328463293|gb|EGF34989.1| putative integral membrane protein [Lactobacillus helveticus MTCC
           5463]
          Length = 252

 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 81/231 (35%), Gaps = 21/231 (9%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +GI        A  T+   +  TS+ S +   +    + K +  +     + ++
Sbjct: 31  YPVLLAVGIPPVF----ANVTNDAALIWTSIGSTVSSTKELKGHWKQVWFYTIFTVVGSI 86

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC--ERKFPD--NYVKYIWGMVTGF 168
           +  +++     S   KA   F    GI+++   + +    +K P     + +I  ++ G 
Sbjct: 87  IGCMLLLSFPSSVFEKAVPFFIAFSGIMIIVSGKHHSLNTKKQPTWLKIIYFIALLIMGA 146

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKAT-ATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +G  G  GG+   +L+ +     +    A    +       AL++ I++          
Sbjct: 147 YTGYFGAAGGVIVLVLLTYITNERFIVINAIKNVICGFANLVALIIFIFTS--------- 197

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               +     + +     +   + + +   + +K + I  + + F  +  F
Sbjct: 198 ---HIYWLQAIPLAIGMFIGGYIGSAILRRVPEKPIRIFIATLAFVQAGYF 245


>gi|254427546|ref|ZP_05041253.1| conserved domain protein, putative [Alcanivorax sp. DG881]
 gi|196193715|gb|EDX88674.1| conserved domain protein, putative [Alcanivorax sp. DG881]
          Length = 247

 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 65/202 (32%), Gaps = 20/202 (9%)

Query: 83  VMSFMEHRRHGTINMKILKDWI-FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG--- 138
           + + +  R    I+   L   I  ++ + T+    +   +    L   F +  +      
Sbjct: 58  MSATLSWRHRQHIHWPTLWRLILPLMVLGTLTGYGLRPWMGDQLLKNGFGLLVVWFSSRE 117

Query: 139 -ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
              M K  ++     +      ++ G+  G  +      GG      +           A
Sbjct: 118 LWRMWKGIKVAPHGSWWSRCWMFLAGITHGLFAS-----GGPLLVYALSGLSLEKKAFRA 172

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T   V   +     +V +  G  L   P        IG ++ ++  +IL   L   L + 
Sbjct: 173 TLILVWLSLNSLLTVVFLIDGTLLPAAPR-------IGLLVPVVIAAIL---LGEWLHHR 222

Query: 258 IGKKYLTIGFSMIMFTTSFVFA 279
           + ++       M+++ T  + A
Sbjct: 223 VNEERFRQAVFMVLWCTGLILA 244


>gi|46578566|ref|YP_009374.1| hypothetical protein DVU0149 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603856|ref|YP_968256.1| hypothetical protein Dvul_2818 [Desulfovibrio vulgaris DP4]
 gi|46447977|gb|AAS94633.1| membrane protein, putative [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120564085|gb|ABM29829.1| protein of unknown function DUF81 [Desulfovibrio vulgaris DP4]
 gi|311232491|gb|ADP85345.1| protein of unknown function DUF81 [Desulfovibrio vulgaris RCH1]
          Length = 350

 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-- 121
              M  A+GT +  +A  S++S M H + G ++ K+    +    +     + M+  +  
Sbjct: 50  GFPMAFAIGTDIAHMAGKSLISTMRHGKFGNVDYKLGMIMLVGTVVGFEAGAQMVMWLER 109

Query: 122 ---DKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
               +  +   + +   L+  ++        +++
Sbjct: 110 LGSVEKVVRWIYIVLLALIAWMVFHDVAKRRQKE 143



 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 29/79 (36%)

Query: 66  CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
             HVA+GT L  +  + +     +   G   +      +    +   V ++   ++    
Sbjct: 222 PTHVAVGTDLFEVMISGLYGAATYTYKGRTELVAAIIMLVGAAMGAQVGAVATKYIKGYG 281

Query: 126 LNKAFAIFCLLMGILMLKR 144
           +  AF +  +   I +L +
Sbjct: 282 IRIAFGLAVVGCAISILMK 300


>gi|305665859|ref|YP_003862146.1| hypothetical protein FB2170_06225 [Maribacter sp. HTCC2170]
 gi|88710630|gb|EAR02862.1| hypothetical protein FB2170_06225 [Maribacter sp. HTCC2170]
          Length = 210

 Score = 41.2 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 47/121 (38%), Gaps = 1/121 (0%)

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN 156
            K +  ++  +    ++   +   +D++      AI  +L  +LM+        +  P +
Sbjct: 35  WKYIVRFLPWMVAGVLIGVFIGKDLDENTFKIGMAII-ILGSVLMMYWWDQKKSKNVPTH 93

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           +    +  V   ++  +G   G F+N+  L       +   T+A +  +I    +   I+
Sbjct: 94  WGFAGFIGVLAGITTMIGNLAGAFSNIFFLAMRLPKNEFIGTAAWLFFIINIFKVPFHIW 153

Query: 217 S 217
           S
Sbjct: 154 S 154


>gi|291444411|ref|ZP_06583801.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291347358|gb|EFE74262.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 258

 Score = 40.8 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 49/159 (30%), Gaps = 11/159 (6%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+  V    +  + +   R   + + +      +    ++  +   + +    L    
Sbjct: 45  LGTNKAVAIVGTSGAAVTFLRKAPVRVGLAVRIGLMALAGSMTGAFFAAGISSEVLRPVI 104

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKY----------IWGMVTGFLSGALGVGGGIF 180
            +  L +   ++ R                          + G   GF  G  G G G F
Sbjct: 105 MVVLLGVAAFVMLRPSFGTAAAGDGTGRPVARARIITAIVLVGGGIGFYDGLFGPGTGTF 164

Query: 181 TNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSG 218
             L +       +  A+AT+  V+      AL +  Y G
Sbjct: 165 LVLGLTAVLHLDLVTASATAKIVNVCTNAGALAMFAYQG 203


>gi|315127214|ref|YP_004069217.1| hypothetical protein PSM_A2149 [Pseudoalteromonas sp. SM9913]
 gi|315015728|gb|ADT69066.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
          Length = 252

 Score = 40.8 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 90/250 (36%), Gaps = 27/250 (10%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           + ++  +S  FG GGGL++   L     +M +   + +H         +      +    
Sbjct: 21  AGVTSFVSAAFGAGGGLML---LVVMASVMPMAMVVPVH--------GLVQLGSNANRLL 69

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
                ++  +L  +     I   ++S ++S ++   +    A+F + +    +       
Sbjct: 70  LSIAHLDKPMLLYFTLGGLIGAGLSSQVVSDINLDSMKLFVALFVIYLLWGTI------P 123

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
           E        + I G++T F+S  +G  G +  + L + +   +      S+ ++   +  
Sbjct: 124 EFNKDSRLGRLIAGVITTFISTFVGASGPLVASYLHINHYDKLKFTATFSSIMTLQHSLK 183

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
           A++     G+              +   L ++    + T L  +L   +  +   + F +
Sbjct: 184 AVV-YAGLGFSFWQ---------WLPLTLAMILSGAIGTWLGIRLLKRLSVERFRVIFKV 233

Query: 270 IMFTTSFVFA 279
           I+   +   A
Sbjct: 234 ILTLLAMQLA 243


>gi|313672017|ref|YP_004050128.1| hypothetical protein Calni_0049 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312938773|gb|ADR17965.1| protein of unknown function DUF81 [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 244

 Score = 40.8 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 74/195 (37%), Gaps = 11/195 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +   L+G ++ L G GG  + +P+L            +   VA GT+   I   ++ +
Sbjct: 7   LFLVGTLTGFINVL-GGGGSFLTLPLLIFF--------GLPATVANGTNRIGILLQNISA 57

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR- 144
            +++   G   +K        + I ++  + +   +      K  AIF   + IL +   
Sbjct: 58  IIKYISAGHFPVKFALLISIPVVIGSITGAKVAVMISDKSFTKYLAIFMFAITILTIFNP 117

Query: 145 -DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
              +  + ++  + + +I   V G   G +  G G          G  + K  A    + 
Sbjct: 118 TKTIKIQNRYLYSILSFIIFFVIGLYGGFIQAGVGFLLLAGTTLLGYDLVKGNAVKVFIV 177

Query: 204 ALIAFPALLVRIYSG 218
            ++   AL V I SG
Sbjct: 178 FILTVAALPVFIISG 192


>gi|114564777|ref|YP_752291.1| hypothetical protein Sfri_3625 [Shewanella frigidimarina NCIMB 400]
 gi|114336070|gb|ABI73452.1| protein of unknown function DUF81 [Shewanella frigidimarina NCIMB
           400]
          Length = 247

 Score = 40.8 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 23/256 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  + I A  ++G     F  G G + VP+L+ A         +         L  +   
Sbjct: 7   FWLVAIPAVLITGMSKSGFAGGAGGLTVPLLALAISPAAAAAVMLP------LLVYMDFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           SV S+      G  N   L   +    +  VV  L+   +++ +L     +  L  G+  
Sbjct: 61  SVRSWW-----GKQNTTQLWILLPAAIVGIVVAYLLFDQLNEQYLRGLLGVISLGFGVYG 115

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L        +  P +++  I G + GF S  +   GG   N  ++       +   T+  
Sbjct: 116 LTLGEWSQRK--PSSFIGRICGTIAGFTS-FVAHAGGPPLNAYLIPLRLPKTEYLGTAVV 172

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             A++    L+     G          +   N+    ++ PI+ +   L  ++     +K
Sbjct: 173 FFAVVNAVKLIPYSMLGQ---------INLSNLLVSALLAPIAWVGVKLGLRIQDKFDEK 223

Query: 262 YLTIGFSMIMFTTSFV 277
                   +M      
Sbjct: 224 QFKKIILSLMIVVGLR 239


>gi|329668122|gb|AEB94070.1| hypothetical protein LJP_1754 [Lactobacillus johnsonii DPC 6026]
          Length = 251

 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 80/231 (34%), Gaps = 20/231 (8%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +GI        A  T+   +  T V S     +    + K +  +     + + 
Sbjct: 32  YPILLSVGIPPVY----ANTTNDAALIWTGVGSTASSLKELKGHWKEVSFYSIFTIVGSA 87

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI---WGMVTGFL 169
           +  +++         K         G+++L    ++ E+   +  ++ I     ++TG  
Sbjct: 88  LGCMLLIQFPGKIFEKIVPFCIAFSGLMILFSGEIHLEKDGNNRLLQIISLLCLVITGIY 147

Query: 170 SGALGVGGGIFTNLLMLFYGASIYKAT-ATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
           +G  G   G+   +++       +    A    + AL    AL++ +++           
Sbjct: 148 AGYFGAASGVLMLVILNAISDDNFLTVNAMKNIIGALSNLVALIIYMFTAK--------- 198

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
              +   + + +   +++ +    ++   I  K + +G +++    +  FA
Sbjct: 199 ---IYWNSAIPLAIGALIGSYFGPQIMRHIPVKVIRLGIAVLALIQAGYFA 246


>gi|71901142|ref|ZP_00683248.1| Protein of unknown function DUF81 [Xylella fastidiosa Ann-1]
 gi|71729106|gb|EAO31231.1| Protein of unknown function DUF81 [Xylella fastidiosa Ann-1]
          Length = 261

 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 65/168 (38%), Gaps = 11/168 (6%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           H+A+GTS   ++  +  + + H   G +  +    +  V      + S +   +D   L 
Sbjct: 45  HIAIGTSAVAVSANAYANLIAHAWKGHVWWRSAVIFALVGTFGAFLGSSIGMLIDGQRLL 104

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY-----IWGMVTGFLSGALGVGGGIFTN 182
             F +   ++G+LML+        +     ++         ++TG  SG  G+GGG    
Sbjct: 105 LLFGLLMAMVGLLMLRGRATAPHAEHHQTVLRMCMKTSSVAILTGAASGFFGIGGGFLIV 164

Query: 183 LLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL 229
             ++F        A  +S     L+A  +  +     +  + L  W++
Sbjct: 165 PALIFATRMPTINAIGSS-----LLAVGSFGLITTLNYARHDLVDWTI 207


>gi|226359693|ref|YP_002777471.1| hypothetical protein ROP_02790 [Rhodococcus opacus B4]
 gi|226238178|dbj|BAH48526.1| hypothetical membrane protein [Rhodococcus opacus B4]
          Length = 255

 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 81/220 (36%), Gaps = 25/220 (11%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+++P L        +   +    A+ T+       +  + +   R   +N ++L  
Sbjct: 25  GGGLILIPALFL------VAPQLTPQAALATNKLTAFTGTSAAVVTFARRIPMNWRLLVP 78

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL--YCERKFPDN---- 156
              +  + + + +  +S +DK           + + + +  R +L     +  P      
Sbjct: 79  AGLLAAVASALGAATVSRIDKDVFIPLIMAVLVGVAVFVTIRPQLGTTLAKDPPTRRKVV 138

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
            V  +   + GF  G  G G G F  +    F G    +    SA ++ +I   + L  +
Sbjct: 139 AVVLLSAGLLGFYDGLFGPGTGTFLIISFATFLGTEFVR----SAAMAKVINLGSNLGAL 194

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
              +   G   W+LG       L +   +++     ++++
Sbjct: 195 VF-FAATGHVLWALG-------LSMAVCNVIGAVTGSRMA 226


>gi|119943843|ref|YP_941523.1| hypothetical protein Ping_0050 [Psychromonas ingrahamii 37]
 gi|119862447|gb|ABM01924.1| hypothetical protein DUF81 [Psychromonas ingrahamii 37]
          Length = 245

 Score = 40.8 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 79/257 (30%), Gaps = 24/257 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I L+I     +  + G  G G   + V         +G +  +    ++   L +  
Sbjct: 1   MEQIWLLIPVVIFAAVVRGFSGFGFAAIAV---------VGFNVFLAPQQSVAIVLSLDL 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+  + +  +    +   LK  +    +   +   ++  +    L     I  L   +
Sbjct: 52  ICSMNLWRQALKQA--DFTTLKRLVCGSLLGIPLGYALLMLMPTEILKILICITILFFCV 109

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
           L+L   R +   K     + +      G  S ++   GG      ML    S     AT 
Sbjct: 110 LLLSEYRPFNTDKT-GTKIGFGLASGAGTASASV---GGPMIVYYMLSSNLSTSSQRATM 165

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                      ++  I  G   + LP          A+LI++  ++        L     
Sbjct: 166 ILFFIASEAFTIIALIAGGVVDSTLPN---------ALLILVIPTLFSVHFGQYLFNRKP 216

Query: 260 KKYLTIGFSMIMFTTSF 276
            + L      ++   + 
Sbjct: 217 PQSLKSFALPVLIAVAL 233


>gi|229827746|ref|ZP_04453815.1| hypothetical protein GCWU000182_03136 [Abiotrophia defectiva ATCC
           49176]
 gi|229787945|gb|EEP24059.1| hypothetical protein GCWU000182_03136 [Abiotrophia defectiva ATCC
           49176]
          Length = 260

 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 46/118 (38%), Gaps = 10/118 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++      G +S   G+GGG + + VL   F       S+    A+ TSL +I  + 
Sbjct: 138 LPILVAVGLFLGIMSSFLGIGGGPINLVVLFYLF-------SMSTKEAVITSLYIIFVSQ 190

Query: 83  VMSF---MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           + S    +         +K+L        +  VV  ++   +    ++K F     +M
Sbjct: 191 IASLGTSIITHSIPDFPIKVLVVMATGGILGGVVGRIVNKKIADKTVDKLFIGLMAVM 248



 Score = 38.9 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 54/144 (37%), Gaps = 11/144 (7%)

Query: 132 IFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT-NLLMLFYGA 190
           I  +   +  + +D++   +K     +    G+  G +S  LG+GGG     +L   +  
Sbjct: 115 IVTIFTLVYTIFKDKI-ATKKLKGLPILVAVGLFLGIMSSFLGIGGGPINLVVLFYLFSM 173

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           S  +A  TS  +  +    +L   I +   +   P        I  ++++    IL   +
Sbjct: 174 STKEAVITSLYIIFVSQIASLGTSIIT-HSIPDFP--------IKVLVVMATGGILGGVV 224

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTT 274
              ++  I  K +   F  +M   
Sbjct: 225 GRIVNKKIADKTVDKLFIGLMAVM 248


>gi|28199762|ref|NP_780076.1| membrane protein [Xylella fastidiosa Temecula1]
 gi|182682512|ref|YP_001830672.1| hypothetical protein XfasM23_1999 [Xylella fastidiosa M23]
 gi|81438286|sp|Q87AD2|Y1894_XYLFT RecName: Full=UPF0721 transmembrane protein PD_1894
 gi|28057883|gb|AAO29725.1| membrane protein [Xylella fastidiosa Temecula1]
 gi|182632622|gb|ACB93398.1| protein of unknown function DUF81 [Xylella fastidiosa M23]
 gi|307578789|gb|ADN62758.1| hypothetical protein XFLM_03940 [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 261

 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 6/154 (3%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           H+A+GTS   ++  +  + + H   G +  +    +  V  +   + S +   +D   L 
Sbjct: 45  HIAIGTSAVAVSVNAYANLIAHAWKGHVWWRSAVIFALVGTLGAFLGSSIGMLIDGQRLL 104

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY-----IWGMVTGFLSGALGVGGGIFTN 182
             F +   ++G+LML+        +     ++         ++TG  SG  G+GGG    
Sbjct: 105 LLFGLLMAMVGLLMLRGRATAPRAEHHQTVLRMCMKTSSVAILTGAASGFFGIGGGFLIV 164

Query: 183 LLMLF-YGASIYKATATSAGVSALIAFPALLVRI 215
             ++F        A  +S            L   
Sbjct: 165 PALIFATRMPTINAIGSSLLAVGSFGLITTLNYA 198


>gi|291562687|emb|CBL41503.1| Predicted permeases [butyrate-producing bacterium SS3/4]
          Length = 254

 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 56/151 (37%), Gaps = 9/151 (5%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  ++    FL+G +  + G GGGL+ +P    A         + +H A+GT+       
Sbjct: 7   HFLIVCPLVFLAGFVDAVAG-GGGLISLPAYMIA--------GLPVHFAIGTNKLSSGMG 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + ++     ++G I  K     I    I + + + +   +D  +  +   +      + +
Sbjct: 58  TTLATARFAKNGYIAWKNALLCIVTALIGSSLGAKLALQLDDYYFKRLILVILPCTALYL 117

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGA 172
                   E++        ++  +  F+ G 
Sbjct: 118 TFGKPFVGEKESFPVRKMILFSALIAFIIGI 148



 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 43/117 (36%), Gaps = 19/117 (16%)

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT---SAGVSALIAFPALLVRIYSGWG 220
            + GF+    G GGG+ +    +  G  ++ A  T   S+G+   +A             
Sbjct: 16  FLAGFVDAVAG-GGGLISLPAYMIAGLPVHFAIGTNKLSSGMGTTLATARFAKN------ 68

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                    G++     L+ +  +++ + L  KL+  +   Y      +I+  T+  
Sbjct: 69  ---------GYIAWKNALLCIVTALIGSSLGAKLALQLDDYYFKRLILVILPCTALY 116


>gi|170691290|ref|ZP_02882455.1| protein of unknown function DUF81 [Burkholderia graminis C4D1M]
 gi|170143495|gb|EDT11658.1| protein of unknown function DUF81 [Burkholderia graminis C4D1M]
          Length = 262

 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 87/268 (32%), Gaps = 31/268 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L   +    G L GL GVGGG +M P+L   F       ++    A+GT L   A T  
Sbjct: 8   LLYSASGLFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAIFCLLM 137
              + H   G+++ ++             +T L++             +        L+ 
Sbjct: 61  TGTLVHGLKGSVDWQVTLRLAAGSVPAATITLLLLHRYGMDTPGASRLIQLVLGAALLVT 120

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            + ++ R         R     +     +  + G V G L     VG G     ++L   
Sbjct: 121 AVALVFRPQLAALGAHRRRTPSQGRTLVLTMLTGAVLGVLVSLTSVGAGAIGVTVLLLLY 180

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +     T   V + IA    L  +       G   W LG V+   +L +L  S+    
Sbjct: 181 PLL----PTMRIVGSDIAHAVPLTLL------AGAGHWLLGSVDWSMLLSLLVGSLPGIA 230

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           + + LS       L    +  +      
Sbjct: 231 IGSMLSARAPDALLRNLLAATLTLVGVR 258



 Score = 36.2 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 51/121 (42%), Gaps = 6/121 (4%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L ++   + G L  L  VG G + V VL   + L+       M + +G+ +    P +
Sbjct: 147 LVLTMLTGAVLGVLVSLTSVGAGAIGVTVLLLLYPLL-----PTMRI-VGSDIAHAVPLT 200

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++   H   G+++  +L   +        + S++ +    + L    A    L+G+ ++
Sbjct: 201 LLAGAGHWLLGSVDWSMLLSLLVGSLPGIAIGSMLSARAPDALLRNLLAATLTLVGVRLV 260

Query: 143 K 143
            
Sbjct: 261 L 261


>gi|291302915|ref|YP_003514193.1| hypothetical protein Snas_5469 [Stackebrandtia nassauensis DSM
           44728]
 gi|290572135|gb|ADD45100.1| protein of unknown function DUF81 [Stackebrandtia nassauensis DSM
           44728]
          Length = 264

 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 50/144 (34%), Gaps = 7/144 (4%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
             TS MS       G ++M+    +       + V ++ +  +D   L     +    + 
Sbjct: 67  TFTSAMSMRRKGLAGPVDMQAPFLFALA---GSAVGTVTVQFIDTRALTVVVPVVLAGIA 123

Query: 139 IL---MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYK 194
           I    M KR     E +        +     GF  GA G G G  FT   +   G  +  
Sbjct: 124 IYFIAMPKRPDRDVEPRLALAPYNSLVVPGIGFYDGAFGPGTGSFFTAAGVSLRGQRLVP 183

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A+A +  ++      +L+V    G
Sbjct: 184 ASAQARMLNFATNVASLVVFAIGG 207


>gi|118395416|ref|XP_001030058.1| hypothetical protein TTHERM_01164150 [Tetrahymena thermophila]
 gi|89284345|gb|EAR82395.1| hypothetical protein TTHERM_01164150 [Tetrahymena thermophila
           SB210]
          Length = 503

 Score = 40.8 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 8/90 (8%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
             V +FL+G +   FG+GGG+V+VP          ++  I  +     S+ ++  T+  S
Sbjct: 369 FAVTAFLAGLIGSTFGLGGGMVLVP--------KWLEQGIPSYKTTPCSISLLFLTAFNS 420

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTS 115
            ++    G    + +  +  +  +++ + S
Sbjct: 421 AIQFALGGVYETEEIIYFSVIALLSSFIVS 450



 Score = 39.3 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 39/110 (35%), Gaps = 5/110 (4%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT--INMKILKDW 103
           L++VPVL   F   G +    + +   T         +    +  + G   I+ +I+   
Sbjct: 134 LIVVPVLMSFF---GYETKKSIALVFITIFSASLGNLMSFMKQKSKDGGPVIDYRIVVLS 190

Query: 104 IFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
           +  + + ++    +   + +  L  A A F L       K  +    ++ 
Sbjct: 191 LPTIMVGSIYGVALNKFIPQIVLAFALAFFILQSLTKTYKSYKREKAKEV 240



 Score = 36.2 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%)

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
              +   + G +    G+GGG+      L  G   YK T  S  +  L AF + +     
Sbjct: 368 GFAVTAFLAGLIGSTFGLGGGMVLVPKWLEQGIPSYKTTPCSISLLFLTAFNSAIQFALG 427

Query: 218 G 218
           G
Sbjct: 428 G 428


>gi|259047395|ref|ZP_05737796.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175]
 gi|259035586|gb|EEW36841.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175]
          Length = 261

 Score = 40.8 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 89/234 (38%), Gaps = 23/234 (9%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           AF ++G+D +  + V    ++  +   S+       +   +  ++ K  +F L   +++ 
Sbjct: 31  AFDVVGMDTTSMISVYSTVAVFTMCLVSI------YKRSKLGFQVDKHIVFGLAFGSIIG 84

Query: 115 SLMISHVDKSFLNKA----------FAIFCLLMGILMLKRDRLYCERKFPDNYVKYI-WG 163
             +   V    +               +F LL GI++   ++   +     N +  I  G
Sbjct: 85  GKIGDIVFLQAVEMMGNQFVSITQSIILFVLLGGIILFTLNKEKIQTLTVSNLIAIITIG 144

Query: 164 MVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           +  G +S  LG+GGG     LM+ F+     +A A S  +        +   IY      
Sbjct: 145 LCVGIISVYLGIGGGPLNIALMVYFFSMKAKEAAAYSIVMIFFAQMMKMTTVIYEFENYQ 204

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                S+ F+ +   +  +    + T +  +L++   ++       +++  T+F
Sbjct: 205 -----SVSFIILAIAIFAVLGGWIGTKIQARLTHETVERLYLGLMMVLLIMTAF 253


>gi|258650564|ref|YP_003199720.1| hypothetical protein Namu_0301 [Nakamurella multipartita DSM 44233]
 gi|258553789|gb|ACV76731.1| protein of unknown function DUF81 [Nakamurella multipartita DSM
           44233]
          Length = 260

 Score = 40.8 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 87/264 (32%), Gaps = 36/264 (13%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC-MHVAMGTSLGVIAPT 81
           I  I +A   +GT++ + G G  LV  P L       G    +  M  A+G     + P 
Sbjct: 6   IIAIFLAGVGAGTINAVVGSGT-LVTFPTLV----AFGYPPVVATMSNAIG-----LVPG 55

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S      +RR        LK  I    +  +V + ++ H+ ++   K   +  ++  +L+
Sbjct: 56  SASGTFGYRRELQGQGPRLKWQIPASFLGALVGAWLLLHLPEATFKKIVPVLLVIALVLV 115

Query: 142 LKRDRLYCERKFP--------------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-L 186
           + + RL    +                      I   + G   G      GI    +M +
Sbjct: 116 VVQPRLQATIRRRAEAAGRDHDTVTRGRFVALIIATFLVGIYGGYFAAAQGILLVGVMGV 175

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
               ++ +  A    ++ ++   A    I  G+            +  GAV +I   S++
Sbjct: 176 LLPETMQRMNAAKNLLTLVVNTVAATTYIIVGFDR----------IAWGAVALIAVGSLI 225

Query: 247 ITPLATKLSYMIGKKYLTIGFSMI 270
              +       +    L     + 
Sbjct: 226 GGFVGAHYGRRLSPVVLRGCIVVF 249



 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 37/121 (30%), Gaps = 7/121 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              +I+A+FL G   G F    G+++V V+                +    +L  +   +
Sbjct: 144 FVALIIATFLVGIYGGYFAAAQGILLVGVMGVLL------PETMQRMNAAKNLLTLVVNT 197

Query: 83  VMSF-MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           V +          I    +        I   V +     +    L     +F L+    +
Sbjct: 198 VAATTYIIVGFDRIAWGAVALIAVGSLIGGFVGAHYGRRLSPVVLRGCIVVFGLIALWRL 257

Query: 142 L 142
           L
Sbjct: 258 L 258


>gi|46579183|ref|YP_009991.1| hypothetical protein DVU0770 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46448596|gb|AAS95250.1| membrane protein, putative [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311233021|gb|ADP85875.1| protein of unknown function DUF81 [Desulfovibrio vulgaris RCH1]
          Length = 316

 Score = 40.8 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/123 (10%), Positives = 37/123 (30%), Gaps = 9/123 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L +  +F+    + + G+ G  +++P             S        T+         
Sbjct: 13  LLPVCVAFVVSFFASMGGISGAFLLLPFQMSVLGYTAPSVS-------ATNQFYNIVAIP 65

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLM-ISHVD-KSFLNKAFAIFCLLMGILM 141
                + R G +   ++   +       +V + + +  +           +  L +G  M
Sbjct: 66  SGVARYIREGRMVWPLVWVVVAGTLPGVLVGAFLRVRWLPDARDFKLFVGLVLLYIGFRM 125

Query: 142 LKR 144
           ++ 
Sbjct: 126 VRD 128


>gi|282901002|ref|ZP_06308935.1| hypothetical protein CRC_02418 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194093|gb|EFA69057.1| hypothetical protein CRC_02418 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 259

 Score = 40.8 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 91/275 (33%), Gaps = 30/275 (10%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           + ++  + +  L+   SF++G+L+ + G GG  +  P L            I    A  +
Sbjct: 1   MLQNFNLFHSFLLFTTSFIAGSLNAVAG-GGSFITFPTLIFV--------GISPITANAS 51

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +   +   S+ S   +RR+  I  K          I  V+ S+++ +   S   K     
Sbjct: 52  NNTALWIASMASAGAYRRNLNIPRKQFLVLCLTSLIGGVIGSVILLYTSPSVFKKLLPYL 111

Query: 134 CLLMGILMLKRD----------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
            L   ++               +   +      +V  I  +      G  G G GI    
Sbjct: 112 LLSATLVFTFNKVLQKWLQIQGQKPLDAPTAPLWVLVIAQLAISIYGGFFGAGLGILMLA 171

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
            + F G     +           AF A L    +G  +  LP    G +     +++   
Sbjct: 172 TLSFLGIKNIHSM---------NAFKAFLGSCINGIAI--LPFMYAGIIAWNQTILMAIG 220

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             L   LA   +Y +   ++     +  F+ +  F
Sbjct: 221 GSLGGYLAAHYAYKLKPSFVKTIVIITGFSMTTYF 255


>gi|218887430|ref|YP_002436751.1| hypothetical protein DvMF_2342 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758384|gb|ACL09283.1| protein of unknown function DUF81 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 350

 Score = 40.8 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 36/107 (33%)

Query: 66  CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
             HVA+GT L  +  + +     +   G   +      +    +   V ++   ++    
Sbjct: 222 PTHVAVGTDLFEVMISGLYGAATYTYKGRTELVAAMIMLVGASVGAQVGAVATKYIKGYG 281

Query: 126 LNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGA 172
           +  AF +  +   + +L +       +F          +V G +S  
Sbjct: 282 IRIAFGLAVVGCALSILMKLVQPWLPQFKSVLDAGATVLVLGLVSCM 328



 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 36/94 (38%), Gaps = 5/94 (5%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-- 121
              M  A+GT +  +A  S++S M H + G ++ K+    +    +   V + M+  +  
Sbjct: 50  GFPMAFAIGTDIAHMAGKSLISTMRHGKFGNVDYKLGMIMLVGTVVGFEVGAQMVMWLER 109

Query: 122 ---DKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
               +  +   +      +  ++        E++
Sbjct: 110 IGNVEKVVRWIYIALLAAIAWMVFHDVAKRREKE 143


>gi|71281566|ref|YP_267760.1| hypothetical protein CPS_1011 [Colwellia psychrerythraea 34H]
 gi|71147306|gb|AAZ27779.1| putative membrane protein [Colwellia psychrerythraea 34H]
          Length = 292

 Score = 40.8 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 95/269 (35%), Gaps = 37/269 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
                   L    +   G GGG+V +P+ ++         +     ++ TS  +      
Sbjct: 43  IFFTFLGTLGAIFANSTGAGGGVVFIPMFTQL--------NFTEQQSIATSFAIQCFGMT 94

Query: 84  MSF---MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAIFC 134
                   H R    ++++ + +  ++ +TT+ + + ++ V        + L+ +F+ F 
Sbjct: 95  AGAVTWWHHYRTEKTDLRLWQGFKRIICVTTIASIIGLNAVFFYQVNSPATLHTSFSWFS 154

Query: 135 LLMG------ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           LL+G      I +L+  R   +  + D     + G+  G ++  L VG G    + +L  
Sbjct: 155 LLLGFFIVLTIYLLQPHRERSQLYYVDYIFLILIGLFGGAVTAWLSVGVGELLVIYLLLR 214

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
              I         ++   A     + +++              V    VL   P ++L  
Sbjct: 215 HFDI--------SMAVAAAVIVSAISVWTAIAQVNSD------VYWQVVLFAGPGAVLGG 260

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             A  L   +    L + F+  +  +  V
Sbjct: 261 IFAKTLVTHLSAIKLKLFFACWLLLSGVV 289


>gi|239931415|ref|ZP_04688368.1| hypothetical protein SghaA1_24564 [Streptomyces ghanaensis ATCC
           14672]
 gi|291439788|ref|ZP_06579178.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291342683|gb|EFE69639.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 260

 Score = 40.8 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 51/156 (32%), Gaps = 7/156 (4%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+GT+  V    +  + + + R   ++++            +   +   + +    L   
Sbjct: 50  ALGTNKAVAIVGTTGAAVTYARKAPVDVRTAVRIGLAALAGSSGGAFFAAGMSTEVLKPV 109

Query: 130 FAIFCLLMGILMLKRDRLYCERKF------PDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
             +  L +   ++ R                      + G   GF  G +G G G F  L
Sbjct: 110 IMVVLLGVAAFVILRPAFGTAPATGPATRRQILAAIGLAGGGIGFYDGLIGPGTGTFLVL 169

Query: 184 LML-FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            +       +  A+AT+  V+      AL +  + G
Sbjct: 170 ALTALLHLDLVTASATAKIVNCCTNAGALAMFAWQG 205


>gi|149927476|ref|ZP_01915730.1| hypothetical protein LMED105_11835 [Limnobacter sp. MED105]
 gi|149823749|gb|EDM82975.1| hypothetical protein LMED105_11835 [Limnobacter sp. MED105]
          Length = 269

 Score = 40.8 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 33/73 (45%)

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           TSL VIA  S    +     G  N +I   +        +   L+ + +  + L KAF  
Sbjct: 196 TSLAVIAIVSTFGVLNSVGAGVFNYEIGITFAAAALCGMLFGRLVSNKMPSTQLKKAFGA 255

Query: 133 FCLLMGILMLKRD 145
            C+++ ILM+ ++
Sbjct: 256 MCVVVAILMVIKN 268



 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 7/106 (6%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           L G GGG++ VP+L            + +       L  +   + +      R G +  K
Sbjct: 17  LTGAGGGVLAVPLLVF-------TTGLPVQEVSAIGLLAVGLAATLGAFLGLRAGEVRYK 69

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                 FV  + + V   +   VD   L  AF++  L +     + 
Sbjct: 70  AAGLMGFVGLLLSPVGFWVAQQVDTKALGLAFSVVLLWVAFNAFRG 115


>gi|145641536|ref|ZP_01797114.1| hypothetical protein CGSHiR3021_03773 [Haemophilus influenzae
           R3021]
 gi|145273827|gb|EDK13695.1| hypothetical protein CGSHiR3021_03773 [Haemophilus influenzae
           22.4-21]
          Length = 120

 Score = 40.8 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 56/125 (44%), Gaps = 9/125 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + ++    F++  +  + G GGGL+ +P L     + G+  +    +A+GT+     
Sbjct: 5   IDLLAILFCVGFVASFIDAIAG-GGGLITIPALL----MTGMPPA----MALGTNKLQAM 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++ + +   R   +N++ +   +  + + + + +L+I  +D +   K      L +G+
Sbjct: 56  GGALSASLYFLRKRAVNLRDIWFILIWVFLGSALGTLLIQSIDVAIFKKMLPFLILAIGL 115

Query: 140 LMLKR 144
                
Sbjct: 116 YFYLP 120


>gi|126666474|ref|ZP_01737453.1| hypothetical protein MELB17_12836 [Marinobacter sp. ELB17]
 gi|126629275|gb|EAZ99893.1| hypothetical protein MELB17_12836 [Marinobacter sp. ELB17]
          Length = 248

 Score = 40.8 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 70/203 (34%), Gaps = 13/203 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+     ++G ++ L   GG ++ +P+L            +   VA GT+   I 
Sbjct: 3   LTEMVLLAALGGVAGFINVL-SAGGSMLTLPLLMFL--------GLPPQVANGTNRVAIT 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+ +     R+G   + I         + +++ + + + V  +          +    
Sbjct: 54  LQSITAVGSFFRNGHGQLGIGLRLAVPAVLGSLLGAWLATDVSAAVFEFILVAAMIATST 113

Query: 140 LMLKRDRLYCERKF-PDNYVKYIWG--MVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
            +L        R   P+     I+    V G   G + VG G +F   L       + + 
Sbjct: 114 FLLLPAPKLDTRPLTPERLGPVIYAAMFVVGLYGGFIQVGVGALFIVALHRMLKIDLLQV 173

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
                 +  L   PAL +   SG
Sbjct: 174 NVLKVFIILLYTIPALAIFAGSG 196


>gi|88800073|ref|ZP_01115643.1| predicted Permease [Reinekea sp. MED297]
 gi|88777199|gb|EAR08404.1| predicted Permease [Reinekea sp. MED297]
          Length = 257

 Score = 40.8 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 77/232 (33%), Gaps = 28/232 (12%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
               H+A+GT L   A T     + H++ G I   I+ +         V+T L ++    
Sbjct: 36  GFPAHIAIGTDLWFAALTKSGGLIAHQKKGHIRWSIVLNLAAGSLPAAVLTGLALTFWFG 95

Query: 124 ------SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYV--------KYIWGMVTGFL 169
                 S L  A     +L  I+++ R RL        N +          + G   G L
Sbjct: 96  SAENYASLLKTALGFMLILTSIVLIFRSRLTRHYGRRSNNLIARKFSIKLLLAGAALGSL 155

Query: 170 SGALGVGGGIF--TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
                VG G      L+++F      +   T    +  +              + G    
Sbjct: 156 VTLSSVGAGAIGTAVLMLMFPYLIPKQVVGTDIAHAVPLTV------------IAGAVHL 203

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            LG V+   +  +L  S+    + + LS  I  + +    + ++      +A
Sbjct: 204 YLGNVDFQLLGALLMGSLPAIYVGSALSGKIPSRLMQPVLATLLMLLGMKYA 255



 Score = 38.5 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 6/115 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +++A    G+L  L  VG G +   VL   F  +           +GT +    P +V++
Sbjct: 145 LLLAGAALGSLVTLSSVGAGAIGTAVLMLMFPYL------IPKQVVGTDIAHAVPLTVIA 198

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
              H   G ++ ++L   +        V S +   +    +    A   +L+G+ 
Sbjct: 199 GAVHLYLGNVDFQLLGALLMGSLPAIYVGSALSGKIPSRLMQPVLATLLMLLGMK 253


>gi|311109351|ref|YP_003982204.1| hypothetical protein AXYL_06196 [Achromobacter xylosoxidans A8]
 gi|310764040|gb|ADP19489.1| hypothetical protein AXYL_06196 [Achromobacter xylosoxidans A8]
          Length = 276

 Score = 40.8 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 34/81 (41%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + M   +GTSL VIA  S    +     G ++ +I   +     +  +    +      
Sbjct: 187 DLTMQAIVGTSLAVIALVSASGVVAAAAGGHLDWRIAAPFTAAAVLGMLAGRKVADRFPP 246

Query: 124 SFLNKAFAIFCLLMGILMLKR 144
             L ++FA+F  ++ + ML +
Sbjct: 247 RRLQQSFALFAGVVAVAMLVK 267



 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 9/125 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMV-PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
                  G + GL G G G +M  P+L     L     +    +A+G S  + A   +  
Sbjct: 10  AALGACVGLILGLTGAG-GAIMAVPLLVFGLHLQVSQAAPIALLAVGLSAALGAVLGL-- 66

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
                R G +  +          + + +       +  + L   FA    ++   M  + 
Sbjct: 67  -----RKGQVRYRAAGFMAVTGILVSPLGLWAARRLPNAPLAIIFAGVLGMVAWRMWNQG 121

Query: 146 RLYCE 150
                
Sbjct: 122 AKPAT 126


>gi|256375346|ref|YP_003099006.1| hypothetical protein Amir_1208 [Actinosynnema mirum DSM 43827]
 gi|255919649|gb|ACU35160.1| protein of unknown function DUF81 [Actinosynnema mirum DSM 43827]
          Length = 267

 Score = 40.8 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 76/231 (32%), Gaps = 24/231 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +P +        I        ++ TS       +  +   +    T++      
Sbjct: 37  GGGLIQLPAMLL------IGPGGQPIYSLATSKVAAVVGTAAAVRTYTVQTTVDWAAALP 90

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP-----DNY 157
             F   +  V  +     ++   LN    +  L +G+   ++  L    +          
Sbjct: 91  MAFAAFVGAVGGAAFAGSLEPGVLNAVVLVALLGVGLYTWRKPELGVADRPRFSRPAQLA 150

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIY 216
                G V GF  G  G G G F   L++   G +   A+AT+  V+      ALL  I 
Sbjct: 151 AMATGGAVIGFYDGLAGPGTGAFLVFLLVGLIGFAFVPASATAKIVNVATNLGALLYFI- 209

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
                 G   W LG V       +   +     +  +L+   G  ++   F
Sbjct: 210 ----PAGKVLWGLGAV-------MAVCNAGGAIVGARLAVRRGSGFVRRVF 249


>gi|34495496|ref|NP_899711.1| transmembrane protein [Chromobacterium violaceum ATCC 12472]
 gi|34101352|gb|AAQ57721.1| probable transmembrane protein [Chromobacterium violaceum ATCC
           12472]
          Length = 263

 Score = 40.8 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 7/105 (6%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           GL G GGG++ VP L              +  A   +L  +A  + +   E  R G +  
Sbjct: 16  GLTGAGGGILAVPALMA-------SQGWSVPQAAPVALLAVAAGAALGAWEGWRRGEVRY 68

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +            + + +     +  ++L   FA+  L++     
Sbjct: 69  RAAAWMALCGLPGSALGARAAHLLPAAWLAAGFALVLLIVAWRAW 113



 Score = 38.5 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 42/107 (39%), Gaps = 11/107 (10%)

Query: 171 GALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
           G  G GGGI     ++            S G S   A P  L+ + +G  L     W  G
Sbjct: 16  GLTGAGGGILAVPALMA-----------SQGWSVPQAAPVALLAVAAGAALGAWEGWRRG 64

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            V   A   +    +  + L  + ++++   +L  GF++++   ++ 
Sbjct: 65  EVRYRAAAWMALCGLPGSALGARAAHLLPAAWLAAGFALVLLIVAWR 111


>gi|116070807|ref|ZP_01468076.1| hypothetical protein BL107_14215 [Synechococcus sp. BL107]
 gi|116066212|gb|EAU71969.1| hypothetical protein BL107_14215 [Synechococcus sp. BL107]
          Length = 258

 Score = 40.8 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 94/260 (36%), Gaps = 27/260 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +   + +S  LS   G G GLV +P L            +    A+ T         V
Sbjct: 10  LALAAVALISNGLSAFAGGGAGLVQLPALILL--------GLNFSTALATHKVASVALGV 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +   H R  +++ ++    +        + + ++  +         A+  L +G+   +
Sbjct: 62  GAAGRHWRASSLDRRLSALVLCAGLPGVWIGANLVLAIPDKAATACLALLTLGLGVYSSR 121

Query: 144 RDRLYCERKFP----DNYVKYIWG-MVTGFLSGALGVGGGIFTNLLML-FYGASIYKATA 197
           R +L  ++ +       +    +G    G ++G+L  G G+F  L ++ ++G S  +A A
Sbjct: 122 RPQLGNDQSWRPLTGTTFWLGAFGLFGIGVINGSLTSGTGLFVTLWLVRWFGLSYTRAVA 181

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSY 256
                         L+ +  GW   G     L G ++   +  ++  S++   +   LS 
Sbjct: 182 ------------HTLILVGLGWNGTGAITLGLQGDIHWQWLPALIAGSLVGGYIGAHLSI 229

Query: 257 MIGKKYLTIGFSMIMFTTSF 276
             G K +   F ++      
Sbjct: 230 KQGDKIVKQAFEVLALVMGL 249


>gi|206561505|ref|YP_002232270.1| hypothetical protein BCAL3161 [Burkholderia cenocepacia J2315]
 gi|198037547|emb|CAR53484.1| putative membrane protein [Burkholderia cenocepacia J2315]
          Length = 281

 Score = 40.8 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 90/268 (33%), Gaps = 31/268 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  ++    G L GL GVGGG +M P+L   F        +    A+GT L   A T  
Sbjct: 27  LLYSLSGLFVGILVGLTGVGGGSLMTPILVLLF-------GVHPATAVGTDLLYAAATKA 79

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSL------MISHVDKSFLNKAFAIFCLLM 137
              + H   G+I+ +I             +T        M +      +     +  LL 
Sbjct: 80  TGTLVHGLKGSIDWRITGRLAAGSVPAAALTLWWLHTHGMNTPGTARMIQLVLGVALLLT 139

Query: 138 GILMLKRD--------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            + ++ R                    +   + G V G L     VG G     ++L   
Sbjct: 140 SLALIFRPQLTAFAARNPLAPNPARTLWSTVLTGAVLGVLVSMTSVGAGAIGVTVLLLLY 199

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +    AT+  V + IA    L        + G+  W LG V+   +L +L  S+    
Sbjct: 200 PLL----ATTRIVGSDIAHAVPLTL------VAGMGHWLLGSVDWSMLLSLLLGSLPGIV 249

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L + LS    ++ L    +  +      
Sbjct: 250 LGSLLSARAPERLLRNLLAATLVAVGVR 277


>gi|300691233|ref|YP_003752228.1| hypothetical protein RPSI07_1581 [Ralstonia solanacearum PSI07]
 gi|299078293|emb|CBJ50941.1| conserved membrane protein of unknown function, DUF81 [Ralstonia
           solanacearum PSI07]
          Length = 273

 Score = 40.8 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 7/120 (5%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
               G +  L G GG +V VP+L     L     +    +A+G S G+ +   +      
Sbjct: 15  GSAVGLILALTGAGGAIVAVPLLIFGMHLSVSQAAPVALLAVGLSAGLGSALGL------ 68

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
            R G +  K          + + +       V  + L   FA+    + I M ++ R   
Sbjct: 69  -REGKVRYKAAALMALCGVVLSPMGVWAAQRVPNTPLTLLFAMVLAHVAIRMFRQARAMA 127



 Score = 40.4 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 30/81 (37%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + M   + TSL VIA  S    +     G ++  I   +        +       H+  
Sbjct: 190 DLPMQTIVATSLAVIALVSASGVVASAIGGHVDWHIALPFAAGALAGMLAGRGFARHLAG 249

Query: 124 SFLNKAFAIFCLLMGILMLKR 144
             L + FA F  ++ I ++ R
Sbjct: 250 PALQQGFAAFAGVVAIGLVVR 270



 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 45/124 (36%), Gaps = 11/124 (8%)

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
                   G   G +    G GG I    L++F    ++ + + +A V+ L    +  + 
Sbjct: 7   GWLASAGLGSAVGLILALTGAGGAIVAVPLLIF---GMHLSVSQAAPVALLAVGLSAGLG 63

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
              G           G V   A  ++    ++++P+    +  +    LT+ F+M++   
Sbjct: 64  SALGLRE--------GKVRYKAAALMALCGVVLSPMGVWAAQRVPNTPLTLLFAMVLAHV 115

Query: 275 SFVF 278
           +   
Sbjct: 116 AIRM 119


>gi|257468631|ref|ZP_05632725.1| hypothetical protein FulcA4_04769 [Fusobacterium ulcerans ATCC
           49185]
 gi|317062888|ref|ZP_07927373.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
 gi|313688564|gb|EFS25399.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
          Length = 261

 Score = 40.8 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 81/215 (37%), Gaps = 20/215 (9%)

Query: 74  SLGVIAPTSVMSFMEHRRHGTI--NMKILKDWIFVLPITTVVTSLMISHVD--------K 123
           S   +   S++S  +  ++ T+  N KI         +  +   +M   V          
Sbjct: 46  SGCTVLSMSIISVAKAMKNSTVKINTKITTWLAIGSVLGGMTGKVMFQVVKEVLQNENRT 105

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
             +     IF  L  ++   +        F +  + +I G++ G LS  LG+GGG    +
Sbjct: 106 GAVQSIVMIFITLGTLIYTAKKNDIKTHNFENKILCFIIGVILGILSSFLGIGGGPINLV 165

Query: 184 LML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           +++ F+  +  +A   S  +       +LL  I +   +  +    LG + +G V   + 
Sbjct: 166 ILIFFFSMTTKEAAINSIYIILFSQIASLLHTILA-RKIPEVSVLYLGLMVLGGVCGGMA 224

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            SI        ++  I ++ +   F  +M    F+
Sbjct: 225 GSI--------VNKKISEEKVDKLFMGLMLVIVFI 251


>gi|145539706|ref|XP_001455543.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124423351|emb|CAK88146.1| unnamed protein product [Paramecium tetraurelia]
          Length = 484

 Score = 40.8 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 34/85 (40%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           Y  G +TGF++G +G+  G+   + M+ +      A AT+     LI        +    
Sbjct: 339 YAAGFLTGFVAGFVGMAAGLTMVVTMVRFKLIAAVAGATANYCYFLICIQVFTSFLVGAS 398

Query: 220 GLNGLPPWSLGFVNIGAVLIILPIS 244
              GLP     F     VL +L  +
Sbjct: 399 QSQGLPVGEQFFFYALGVLAVLTFT 423


>gi|332560776|ref|ZP_08415094.1| hypothetical protein RSWS8N_17059 [Rhodobacter sphaeroides WS8N]
 gi|332274574|gb|EGJ19890.1| hypothetical protein RSWS8N_17059 [Rhodobacter sphaeroides WS8N]
          Length = 253

 Score = 40.4 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 28/249 (11%), Positives = 77/249 (30%), Gaps = 24/249 (9%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           +   G ++GL G G         +  F L    + +    A+  S  +   + +      
Sbjct: 13  AAAGGFVNGLAGFG---------TALFALAFWLEILPPAQAVAISAVMSVTSGLPGLWAV 63

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLY 148
           R   +   + +  ++    +   +  L + +V+  +L      F  L G+    +R    
Sbjct: 64  REAISRQPRRILRFVLPALVAVPLGVLSLQYVEAGWLKLVIGGFMGLYGLFFAFRRTLPA 123

Query: 149 CERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
            + + P   +   + G   G  +       G    +    +  +  +        +  I 
Sbjct: 124 LDLRMPVADMAVGFSGGFLGGAASL----SGALPTMWCTLHAWTRQEQRGVMQPFNVTIL 179

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
              +++  + G               +  +   LP+++L   +  +L   +         
Sbjct: 180 GATVVLLAFQGAYTAET---------LLLIAGALPVTMLAAQVGVRLFARLTDAQFKRLL 230

Query: 268 SMIMFTTSF 276
            +++F +  
Sbjct: 231 ILLLFVSGA 239


>gi|77465171|ref|YP_354674.1| hypothetical protein RSP_6166 [Rhodobacter sphaeroides 2.4.1]
 gi|126464632|ref|YP_001045745.1| hypothetical protein Rsph17029_3894 [Rhodobacter sphaeroides ATCC
           17029]
 gi|77389589|gb|ABA80773.1| hypothetical membrane protein [Rhodobacter sphaeroides 2.4.1]
 gi|126106443|gb|ABN78973.1| protein of unknown function DUF81 [Rhodobacter sphaeroides ATCC
           17029]
          Length = 253

 Score = 40.4 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 28/249 (11%), Positives = 77/249 (30%), Gaps = 24/249 (9%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           +   G ++GL G G         +  F L    + +    A+  S  +   + +      
Sbjct: 13  AAAGGFVNGLAGFG---------TALFALAFWLEILPPAQAVAISAVMSVTSGLPGLWAV 63

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLY 148
           R   +   + +  ++    +   +  L + +V+  +L      F  L G+    +R    
Sbjct: 64  REAISRQPRRILRFVLPALVAVPLGVLSLQYVEAGWLKLVIGGFMGLYGLFFAFRRTLPA 123

Query: 149 CERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
            + + P   +   + G   G  +       G    +    +  +  +        +  I 
Sbjct: 124 LDLRMPVADMAVGFSGGFLGGAASL----SGALPTMWCTLHAWTRQEQRGVMQPFNVTIL 179

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
              +++  + G               +  +   LP+++L   +  +L   +         
Sbjct: 180 GATVVLLAFQGAYTAET---------LLLIAGALPVTMLAAQVGVRLFARLTDAQFKRLL 230

Query: 268 SMIMFTTSF 276
            +++F +  
Sbjct: 231 ILLLFVSGA 239


>gi|302834698|ref|XP_002948911.1| hypothetical protein VOLCADRAFT_89258 [Volvox carteri f.
           nagariensis]
 gi|300265656|gb|EFJ49846.1| hypothetical protein VOLCADRAFT_89258 [Volvox carteri f.
           nagariensis]
          Length = 1005

 Score = 40.4 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 46/135 (34%), Gaps = 15/135 (11%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP----TS 82
           +    L G+++   GVGGG + +P+ +             +  +   S   I      T 
Sbjct: 21  LAIIVLVGSVASSSGVGGGAIFIPLFNALVGFN-------LKSSTALSQACITFGAAATL 73

Query: 83  VMSFMEHRRHGT----INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
           + + M H         ++  ++     +L +   +  L+   +    L     +  + + 
Sbjct: 74  LANLMHHHPSDPTVALVDFTLVAVLTPMLLMGVGIGVLLNVMLPSWLLTTLLLLLLIALV 133

Query: 139 ILMLKRDRLYCERKF 153
              L ++ L   ++ 
Sbjct: 134 AQSLSKEHLPASQEP 148



 Score = 37.7 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 38/97 (39%), Gaps = 5/97 (5%)

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           ++ G ++ + GVGGG     L     G ++  +TA S               + +    +
Sbjct: 25  VLVGSVASSSGVGGGAIFIPLFNALVGFNLKSSTALSQACITF----GAAATLLANLMHH 80

Query: 223 GLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                ++  V+   V ++ P+ ++   +   L+ M+ 
Sbjct: 81  HPSDPTVALVDFTLVAVLTPMLLMGVGIGVLLNVMLP 117


>gi|218460437|ref|ZP_03500528.1| putative permease protein [Rhizobium etli Kim 5]
          Length = 137

 Score = 40.4 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 8/106 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-T 81
           +  I+   F  G L+ + GVGGG +MVP +    +       I  +V +GTSL  I   T
Sbjct: 6   VIPIVALGFAIGILTSIMGVGGGFIMVPAMIYLLR-------IPTNVVVGTSLYQIIFVT 58

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           +  + ++   + ++++ +    +    I       +   +    L 
Sbjct: 59  AYTTIVQAATNFSVDIVLAFILMVAGVIGAQYGVRVGQKLRGEQLR 104


>gi|332703308|ref|ZP_08423396.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332553457|gb|EGJ50501.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 358

 Score = 40.4 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 99/289 (34%), Gaps = 56/289 (19%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              +     + G +SG  G GG  V+ P +            +   VA+ +++    P +
Sbjct: 20  FTFLFFVGLVGGLVSGFIGSGGAFVLTPGMMSL--------GVPGTVAVASNMCHKFPKA 71

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--------DKSFLNKAFAIFC 134
           ++  ++  R+  +++K+         +   +      ++           +++  F    
Sbjct: 72  LVGAIKRFRYNQVDVKLGVILGASAEVGVQIGIGFQKYILDTFGPAGSDLYVSLMFVAVL 131

Query: 135 LLMGILMLK-----------------RDRLYCERKFP-----------DNYVKYIWGMVT 166
           +++G ++ +                   ++     +P             +     G+ T
Sbjct: 132 VIVGGIVFRDAINIKNSGGEEKATSLSKKIQSIELWPMITFKRSGIRVSLWFTVPLGLAT 191

Query: 167 GFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           G L+  + VGG +    ++   G +   A+ T   ++ ++      +  + G        
Sbjct: 192 GLLAATIAVGGFVGVPGMIYLLGVASIMASGTELVIAFVMGLGGSAIWAFYGL------- 244

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
                V+I   LIIL  S+L   L    +  + +  + +  ++IM   +
Sbjct: 245 -----VDIRLTLIILSGSLLGVQLGAIGTTYVKEYMIKVVMAVIMLIVA 288



 Score = 36.6 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 70/197 (35%), Gaps = 14/197 (7%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M+   +  +   +   +     +G L+    VG G V VP +     +  I       +A
Sbjct: 169 MITFKRSGIRVSLWFTVPLGLATGLLAATIAVG-GFVGVPGMIYLLGVASI-------MA 220

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
            GT L +     +        +G +++++    +    +   + ++  ++V +  +    
Sbjct: 221 SGTELVIAFVMGLGGSAIWAFYGLVDIRLTLIILSGSLLGVQLGAIGTTYVKEYMIKVVM 280

Query: 131 AIFCLLMGILMLKRDRLYCER----KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
           A+  L++ +        Y  +       D  V  +  +  G +  AL VG GI    +  
Sbjct: 281 AVIMLIVAVSRGLAIPKYLTKLGVMSLGDTTVSILSTVSFGIMLLALVVGAGIILKAMFT 340

Query: 187 FYGASIYKATATSAGVS 203
             G    +A A +A   
Sbjct: 341 --GLRQERAQADAAATG 355


>gi|90412374|ref|ZP_01220378.1| putative integral membrane protein [Photobacterium profundum 3TCK]
 gi|90326636|gb|EAS43035.1| putative integral membrane protein [Photobacterium profundum 3TCK]
          Length = 252

 Score = 40.4 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 75/208 (36%), Gaps = 14/208 (6%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A    L ++    V +  EH RH   +   +K  +    +  V+  L +S   ++ L   
Sbjct: 47  AAAILLPILCLMDVFAIKEHYRHA--DYTQIKLMLPGAVVGVVLAGLFLSVTPEAGLKLL 104

Query: 130 FAIFCLLMGILMLKRDRLYCER--KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
                LL  +  +       ++          + W +++GF S A+  GGG   ++ +L 
Sbjct: 105 IGGLSLLFCLQYIASRNKVKKKLGVVSGVITAWFWSVLSGFSSTAIHAGGGP-ASIYLLP 163

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                    AT A +  +I    L+     G              N+   L+++P++ + 
Sbjct: 164 LKLDKVVLVATMAVLFGIINLFKLVPYTLLGEFDQT---------NLLTALVLMPLAPVG 214

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             L  K+ + + +  +       +F + 
Sbjct: 215 VKLGIKILHRVSQDLIYKLCYFFLFLSG 242


>gi|303326013|ref|ZP_07356456.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
 gi|302863929|gb|EFL86860.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
          Length = 319

 Score = 40.4 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 72/294 (24%), Gaps = 53/294 (18%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
              +      + + GV G  +++P        +    S        T+            
Sbjct: 32  FAVALGVSFFTSMGGVSGAFLLLPFQMSVLGYVNPSVS-------ATNQFFNVLACPAGV 84

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV--DKSFLNKAFAIFCLLMGILMLK- 143
             + R G +   +               +L+  ++  D         +  L +   ML+ 
Sbjct: 85  WRYWREGRLLWPLTLVVALGTLPGVFAGALIRINLLPDPRHFKIFAGLVLLYVAAKMLRD 144

Query: 144 ---RDRLYCERKFP--DNYVKYIWGMVTGFLS-----------------GALGV------ 175
              R R       P      +   G     LS                    G+      
Sbjct: 145 LLSRRRNPSGGTSPAASPAARLTTGGSCQVLSWNTRILAFRFQDQEYRISCRGIVLLSLI 204

Query: 176 -----------GGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
                      GG I    L+ F+G  ++     S   + L +   +           GL
Sbjct: 205 VGLVGGVYGIGGGAIMAPFLVSFFGLPVHAVAGASLFATFLTSVAGVGFYSLLAPLHPGL 264

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
                   +    L++    +    L  +    +    L    + I+  T+  +
Sbjct: 265 AVAP----DWRLGLLLGLGGMAGMYLGARCQKHVPATALKYLLAGILLFTAARY 314


>gi|325967998|ref|YP_004244190.1| hypothetical protein VMUT_0477 [Vulcanisaeta moutnovskia 768-28]
 gi|323707201|gb|ADY00688.1| hypothetical protein VMUT_0477 [Vulcanisaeta moutnovskia 768-28]
          Length = 316

 Score = 40.4 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 7/115 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
            G +SG+FGVG G  +VPV +    L        + VA  TS  +IA     +   +   
Sbjct: 202 VGLVSGMFGVGAGWAIVPVYNLVMYL-------PLKVAAATSKVLIAIGDTGALWVYINS 254

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
           G +    L   +  + + T +   ++       +        L+  + + ++   
Sbjct: 255 GALVFPFLAPCVIGMVLGTELGVRVMPKAKIPIIRWVIIAVMLITSVRLFQQAIP 309



 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 84/238 (35%), Gaps = 46/238 (19%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V +   ++V   + G L+ L GVGG ++  P++  AF  +  D      +A+ T      
Sbjct: 25  VVFCITMLVICIIIGFLAALAGVGGAVLFTPIMM-AFTAINTDVIRTTGLAIAT------ 77

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S+++  ++   G  N   +        +++++ +++   + +SF N   A   L +  
Sbjct: 78  VGSLIASRQYLSKGLANFNAIILTAVPYTVSSILGAVLGLEITRSFGNVGVASIRLGLAA 137

Query: 140 LMLK--------------------------------------RDRLYCERKFPDNYVKYI 161
           LML                                         R     K  +     +
Sbjct: 138 LMLFIVGLFLWRGRQVDIPNSVNKVDRIARIFQLENARYYEESLRTVVTYKAVNTVWGLL 197

Query: 162 WGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
             +  G +SG  GVG G     +  L     +  A ATS  + A+    AL V I SG
Sbjct: 198 CFIGVGLVSGMFGVGAGWAIVPVYNLVMYLPLKVAAATSKVLIAIGDTGALWVYINSG 255


>gi|260102393|ref|ZP_05752630.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
 gi|260083837|gb|EEW67957.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
          Length = 252

 Score = 40.4 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 80/231 (34%), Gaps = 21/231 (9%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +GI        A  T+   +  TS+ S +   +    + K +  +     + ++
Sbjct: 31  YPVLLAVGIPPVF----ANVTNDAALIWTSIGSTVSSTKELKGHWKQVWFYTIFTVVGSI 86

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC--ERKFPD--NYVKYIWGMVTGF 168
           +  +++     S   KA   F    GI+++   + +    +K P     + +I  ++ G 
Sbjct: 87  IGCMLLLSFPSSVFEKAVPFFIAFSGIMIIVSGKHHSLNTKKQPTWLKIIYFIALLIMGA 146

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKAT-ATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +G  G  GG+   +L+ +     +    A    +       AL++ I++          
Sbjct: 147 YTGYFGAAGGVIVLVLLTYITNERFIVINAIKNVICGFANLVALIIFIFTS--------- 197

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               +     + +     +   +   +   + +K + I  + + F  +  F
Sbjct: 198 ---HIYWLQAIPLAIGMFIGGYIGPAILRRVPEKPIRIFIATLAFVQAGYF 245


>gi|323465859|gb|ADX69546.1| Integral membrane protein [Lactobacillus helveticus H10]
          Length = 252

 Score = 40.4 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 80/231 (34%), Gaps = 21/231 (9%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +GI        A  T+   +  TS+ S +   +    + K +  +     + ++
Sbjct: 31  YPVLLAVGIPPVF----ANVTNDAALIWTSIGSTVSSTKELKGHWKQVWFYTIFTVVGSI 86

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC--ERKFPD--NYVKYIWGMVTGF 168
           +  +++     S   KA   F    GI+++   + +    +K P     + +I  ++ G 
Sbjct: 87  IGCMLLLSFPSSVFEKAVPFFIAFSGIMIIVSGKHHSLNTKKQPTWLKIIYFIALLIMGA 146

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKAT-ATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +G  G  GG+   +L+ +     +    A    +       AL++ I++          
Sbjct: 147 YTGYFGAAGGVIVLVLLTYITNERFIVINAIKNVICGFANLVALIIFIFTS--------- 197

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               +     + +     +   +   +   + +K + I  + + F  +  F
Sbjct: 198 ---HIYWLQAIPLAIGMFIGGYIGPAILRRVPEKPIRIFIATLAFVQAGYF 245


>gi|126458964|ref|YP_001055242.1| hypothetical protein Pcal_0341 [Pyrobaculum calidifontis JCM 11548]
 gi|126248685|gb|ABO07776.1| protein of unknown function DUF81 [Pyrobaculum calidifontis JCM
           11548]
          Length = 244

 Score = 40.4 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 78/208 (37%), Gaps = 28/208 (13%)

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           TSL  I              G +N ++L  ++ +     V+++L        ++  A+ +
Sbjct: 51  TSLTSIF----------NYRGLLNFRLLWRYMALSASAAVLSALASVKYSGEWVKLAYGV 100

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGAS 191
           + +++G+++L   R           + +      G  S   GVGGG      ++   G  
Sbjct: 101 YLIVVGVVLLVEARPRRRAPVLGYLLIFAG----GLASALFGVGGGTVFVPALVLAMGFD 156

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
              A A+S G+    A  + L+              SLG +++   + +   S +   +A
Sbjct: 157 AKAAAASSMGIILPTAVASTLMYA------------SLGVLDVVLGVAVALGSFIGAFVA 204

Query: 252 TK-LSYMIGKKYLTIGFSMIMFTTSFVF 278
           ++ +   +  +++   F   +F     +
Sbjct: 205 SRYIMPRLKSQHVRKMFVGYVFAVGAYY 232


>gi|297196357|ref|ZP_06913755.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297153192|gb|EFH32201.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 248

 Score = 40.4 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 74/223 (33%), Gaps = 19/223 (8%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VPVL       G   +     A+     ++  TS  +   H R G +  +    +  
Sbjct: 27  ILAVPVLIYLL---GFSPAAATTAAL----LIVTATSATALYAHSRAGNVRWRTGALFAA 79

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
              +         + + +  L  AFA    L  + ML   R   +            G  
Sbjct: 80  AGVLPAAAAGAAAARLPQHVLTAAFAAVAGLAAVRMLAPARTTAQAPAERPLKAAGAGAG 139

Query: 166 TGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
            G L+G LGVGGG      L+   G  +  A  TS     +I+  A+   +  G    GL
Sbjct: 140 LGALTGLLGVGGGFLAVPALVTILGFEMQAAVGTSL---LVISANAIASLVTRGSTAAGL 196

Query: 225 PPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
                   +   +   +  ++L      +L+  +    L   F
Sbjct: 197 --------DWAIIAPFIATAVLGAWDGRRLAAKVSGTVLRRTF 231


>gi|307596431|ref|YP_003902748.1| hypothetical protein Vdis_2329 [Vulcanisaeta distributa DSM 14429]
 gi|307551632|gb|ADN51697.1| protein of unknown function DUF81 [Vulcanisaeta distributa DSM
           14429]
          Length = 281

 Score = 40.4 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 89/253 (35%), Gaps = 47/253 (18%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + +A+     ++   G+ G  +++P+ S          S    V   T+L     +  +S
Sbjct: 11  LFMAALAISFVTSQGGISGAYLLLPIQSYIL-------STANPVISSTNLLYNIISIPLS 63

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
             E+ R      +I   +  +L I     +++ + +   +L   +A    +  +L+    
Sbjct: 64  IHEYLRER----RIAAPFTLILVIGASAGAVVGTWLRGHYLTGGYAFSYFMSAVLLALAM 119

Query: 146 RLYCERKFP--------------------------------DNYVKYIWGMVTGFLSGAL 173
            +                                       +  +  +  ++ G +SG  
Sbjct: 120 EIILSNALLIRRVHTYETVVRCSRDKTSLVIITNKGNTYRVNTILLMVITLLVGIVSGTY 179

Query: 174 GVGGGI-FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
           G+GG    + +LM   G   Y  +  +  V+ +++   +L   Y G+  + +   S+G  
Sbjct: 180 GIGGASILSPVLMGPMGLPAYIISGPTLMVTLMVSLIGVLSYAYLGYPPDVINGLSMG-- 237

Query: 233 NIGAVLIILPISI 245
            +G ++ I   +I
Sbjct: 238 -LGGLIGIYLGTI 249



 Score = 35.8 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 48/121 (39%), Gaps = 8/121 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L++V + L G +SG +G+GG  ++ PVL            +  ++  G +L V    S+
Sbjct: 163 ILLMVITLLVGIVSGTYGIGGASILSPVLMG-------PMGLPAYIISGPTLMVTLMVSL 215

Query: 84  MSFMEHRRHGTINMKI-LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +  + +   G     I          I   + ++    + +  +    A+   +MGI  +
Sbjct: 216 IGVLSYAYLGYPPDVINGLSMGLGGLIGIYLGTITQRRLPERHIRLTVAVATAIMGIYTI 275

Query: 143 K 143
            
Sbjct: 276 L 276


>gi|241206258|ref|YP_002977354.1| hypothetical protein Rleg_3569 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860148|gb|ACS57815.1| protein of unknown function DUF81 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 254

 Score = 40.4 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 62/203 (30%), Gaps = 15/203 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +    + A  L G   G  G    L+ +P L+           +    A    L ++ 
Sbjct: 5   LSFYYAAVPAVLLVGLAKGGMGDALSLIGLPFLALV---------VSPVEAAAILLPILV 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              ++S +  R+HG  +   LK  +        +     + V  + L        +L  +
Sbjct: 56  FMDMISLVIWRKHG--DWATLKIMLPGAIFGIALGWATSALVPGNMLRIVIGAVTILFCL 113

Query: 140 -LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSG---ALGVGGGIFTNLLMLFYGASIYKA 195
                       +  P    + +   + G  SG    +   GG    +  L       + 
Sbjct: 114 RYFWNSFGPGAGKVIPPRGQRPVAAGLWGTFSGYGSFVAHAGGAPFQIYALPLKLQPREY 173

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
           T TS    A++    L+     G
Sbjct: 174 TGTSVRFFAILNAIKLIPYFALG 196


>gi|161506910|ref|YP_001576864.1| putative integral membrane protein [Lactobacillus helveticus DPC
           4571]
 gi|160347899|gb|ABX26573.1| putative integral membrane protein [Lactobacillus helveticus DPC
           4571]
          Length = 252

 Score = 40.4 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 80/231 (34%), Gaps = 21/231 (9%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +GI        A  T+   +  TS+ S +   +    + + +  +     + ++
Sbjct: 31  YPVLLAVGIPPVF----ANVTNDAALIWTSIGSTVSSTKELKGHWEQVWFYTIFTVVGSI 86

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC--ERKFPD--NYVKYIWGMVTGF 168
           +  +++     S   KA   F    GI+++   + +    +K P     + +I  ++ G 
Sbjct: 87  IGCMLLLSFPSSVFEKAVPFFIAFSGIMIIVSGKHHSLNTKKQPTWLKIIYFIALLIMGA 146

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKAT-ATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +G  G  GG+   +L+ +     +    A    +       AL++ I++          
Sbjct: 147 YTGYFGAAGGVIVLVLLTYITNERFIVINAIKNVICGFANLVALIIFIFTS--------- 197

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               +     + +     +   +   +   + +K + I  + + F  +  F
Sbjct: 198 ---HIYWLQAIPLAIGMFIGGYIGPAILRRVPEKPIRIFIATLAFVQAGYF 245


>gi|160873188|ref|YP_001552504.1| hypothetical protein Sbal195_0062 [Shewanella baltica OS195]
 gi|160858710|gb|ABX47244.1| protein of unknown function DUF81 [Shewanella baltica OS195]
 gi|315265415|gb|ADT92268.1| protein of unknown function DUF81 [Shewanella baltica OS678]
          Length = 245

 Score = 40.4 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 86/256 (33%), Gaps = 23/256 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  + I A  ++G     F  G G + VP+L      + I  +    + +   L  +   
Sbjct: 7   FWLVAIPAVLITGISKSGFAGGVGGLTVPLL-----ALAISPTTAAALMLP-LLIYMDFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           SV S+         N + L   +    +   +  L+   +++ +L        L  G+  
Sbjct: 61  SVRSWWGQH-----NPRHLWILLPAAIVGIFIAYLLFDRLNEEYLRAILGCVSLGFGLYG 115

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L        +  P   V  + G+  GF S  +   GG   N  +L    +  +  AT+  
Sbjct: 116 LILGDKT--QASPSPLVGRLCGLTAGFTS-FVAHAGGPPLNAYLLPLRLAKAEFLATAVV 172

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             A++    L+     G              NI   L+++P++ L   L   +   I  +
Sbjct: 173 FFAVVNLVKLIPYSLLGQINQE---------NIIVSLLLVPLAWLGVKLGLFIQDKINDR 223

Query: 262 YLTIGFSMIMFTTSFV 277
                  ++M      
Sbjct: 224 LFKRIILILMVLVGVR 239


>gi|90415612|ref|ZP_01223546.1| hypothetical protein GB2207_09851 [marine gamma proteobacterium
           HTCC2207]
 gi|90332935|gb|EAS48105.1| hypothetical protein GB2207_09851 [marine gamma proteobacterium
           HTCC2207]
          Length = 276

 Score = 40.4 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 48/124 (38%), Gaps = 7/124 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +V   + G + GL G GG +  VP+L            + ++ A+G +LG +A ++++  
Sbjct: 3   VVIGLVIGLVLGLTGAGGSIFAVPLLMLL-------LGLPINDAIGIALGAVAVSALIGT 55

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           + + R   I             +   +   + S +    L   F     ++  +M ++  
Sbjct: 56  LGNWRAQYILWVPAISLGLGGAVVAPIGKYIGSQLPPILLLLGFCALAFIIAGIMWRQTV 115

Query: 147 LYCE 150
              E
Sbjct: 116 TTPE 119


>gi|227545448|ref|ZP_03975497.1| integral membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300908468|ref|ZP_07125931.1| conserved hypothetical protein [Lactobacillus reuteri SD2112]
 gi|227184589|gb|EEI64660.1| integral membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300893875|gb|EFK87233.1| conserved hypothetical protein [Lactobacillus reuteri SD2112]
          Length = 261

 Score = 40.4 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 48/121 (39%), Gaps = 6/121 (4%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I+  F+ G  SG F  G G++M+ +L+   +      +  +          +  T+  
Sbjct: 145 LSIIGIFIVGIYSGFFNAGAGVLMLTLLTVINRQKSFAVNNALKN------VAMTVTNTT 198

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S++      TI    +   +    I   +  +++ H+    +     I  L++ I ++ R
Sbjct: 199 SWIVFALETTIYWNYVIPLMIGNVIGGYLGPIIVRHLPGRLMQIIVGIGSLILAISLVIR 258

Query: 145 D 145
           +
Sbjct: 259 N 259



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/220 (10%), Positives = 63/220 (28%), Gaps = 22/220 (10%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +A  TS       +  S     +    N + L   + ++   +++ + ++  V   +  +
Sbjct: 44  MANVTSAFSTVTGNYSSVFSSFKELEHNRRQLWIILPLVFAGSIIGAFLLFAVPSKWFAE 103

Query: 129 AFAIFCLLMGILMLKRDRLYCE------------RKFPDNYVKYIWGMVTGFLSGALGVG 176
              +   L GI++L                    +     ++  I   + G  SG    G
Sbjct: 104 LVPLCIALAGIILLFPHHPKQSTGTMVGNSKLFGKSRIGQFLSIIGIFIVGIYSGFFNAG 163

Query: 177 GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
            G+    L+         A   +   +  +        I                +    
Sbjct: 164 AGVLMLTLLTVINRQKSFAVNNALK-NVAMTVTNTTSWIVFALETT---------IYWNY 213

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           V+ ++  +++   L   +   +  + + I   +     + 
Sbjct: 214 VIPLMIGNVIGGYLGPIIVRHLPGRLMQIIVGIGSLILAI 253


>gi|300863696|ref|ZP_07108629.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300338303|emb|CBN53775.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 123

 Score = 40.4 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 10/126 (7%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV-IA 79
             I  +++    +G   G+FG+GGG +MVP +            +    A GTS+   I 
Sbjct: 3   STIVQLLLIGLAAGVAGGMFGIGGGAIMVPAMVLLM-------GMDQKFATGTSIAAQIF 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMIS--HVDKSFLNKAFAIFCLLM 137
           P  +++ M + R+G +N+K        L I     +L  +  ++    + K +  F L++
Sbjct: 56  PIGILAAMVYYRNGNLNIKHAVFIAIGLVIGNFFGALFANQPYISSEMMKKLYGGFLLVI 115

Query: 138 GILMLK 143
           G   L 
Sbjct: 116 GCRYLF 121


>gi|255650510|ref|ZP_05397412.1| hypothetical protein CdifQCD_10036 [Clostridium difficile
           QCD-37x79]
          Length = 194

 Score = 40.4 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 66/178 (37%), Gaps = 18/178 (10%)

Query: 99  ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF----- 153
           +LK  +    I +V+    +  + +  LN    +  L++ I       L  E  F     
Sbjct: 15  LLKKLVPFTIIGSVLGVRCVLSISEEILNVLVVVMILIVAIYTFISKNLGQEDNFEAVNK 74

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALL 212
            +  +  +  ++ GF  G  G G G F     +  YG     A+A +  ++      +LL
Sbjct: 75  KNLRLGMLMALIMGFYDGFFGPGTGTFLTFGFIKIYGYDFLHASANTKILNLTSNITSLL 134

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           + + +G             V+    ++   + I+   +  K++   G K +   F ++
Sbjct: 135 LFMINGQ------------VDYKIAIVFALVMIMGAYVGAKVAIKKGSKMIKPIFLVM 180


>gi|218663222|ref|ZP_03519152.1| hypothetical protein RetlI_29773 [Rhizobium etli IE4771]
          Length = 137

 Score = 40.4 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 12/126 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   +VA  + G ++ L GV GG +++P L   F          + +A   SL V  PT 
Sbjct: 17  IIAGVVAGLVIGVVASLLGVAGGELLIPTLILLFGAD-------IRLAGSLSLAVSLPTM 69

Query: 83  VMSFMEHRRHGTI-----NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           ++ F  + R  +      N   L        +   +   ++  +  + L    A+  ++ 
Sbjct: 70  IVGFTRYSRDQSFAAIRSNRVFLLAMAAGSILGAFIGGHLLGIIPSAVLLSGLALILVIS 129

Query: 138 GILMLK 143
            I + +
Sbjct: 130 AIKVWR 135


>gi|317407669|gb|EFV87606.1| hypothetical protein HMPREF0005_03640 [Achromobacter xylosoxidans
           C54]
          Length = 108

 Score = 40.4 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 38/94 (40%), Gaps = 12/94 (12%)

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             ++   +      A A +  +    +  AL+   ++G        W +G       L +
Sbjct: 19  VPIITTVFRLPQTTAQALALCMVIPGSAVALVTYSWAGQA-----DWLVG-------LPL 66

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
              S+L  P+  +L+Y + ++ L   F+ ++F T
Sbjct: 67  AAGSLLFVPVGVRLAYRLPERKLRASFAAMLFAT 100


>gi|19551382|ref|NP_599384.1| permease [Corynebacterium glutamicum ATCC 13032]
 gi|62389025|ref|YP_224427.1| permease [Corynebacterium glutamicum ATCC 13032]
 gi|145294254|ref|YP_001137075.1| hypothetical protein cgR_0210 [Corynebacterium glutamicum R]
 gi|14348659|gb|AAK61332.1|AF326511_1 unknown [Corynebacterium glutamicum]
 gi|21322895|dbj|BAB97524.1| Hypothetical membrane protein [Corynebacterium glutamicum ATCC
           13032]
 gi|41324358|emb|CAF18698.1| permease [Corynebacterium glutamicum ATCC 13032]
 gi|140844174|dbj|BAF53173.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 252

 Score = 40.4 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 88/246 (35%), Gaps = 19/246 (7%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           V+    +++ +  +   L  + G+G GLV  PVL+      G    + M   +       
Sbjct: 3   VLTIAIVLLASVLIGALLQRMTGLGVGLVTGPVLTSLL---GPLAGVTMVNGLS------ 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              +V +    R+    +    +     L + +V    ++  ++  +L   F    +L+ 
Sbjct: 54  IINAVNNAWSVRKRT--DWAKFRILAGALVLGSVPAVAVVYFLNGPWL-LIFVGAMVLLA 110

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           + +          K        I+GM+ GF+S   G+ G   T               AT
Sbjct: 111 LGVSLFPTEKFALKQEAKLPMVIFGMIGGFMSTVAGIAGPSLTV-YARLSRWDYRDFVAT 169

Query: 199 SAGVSALIAFPALL--VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
              V  +    + L  V +  G    G P W    + IGAV +I   + L   +  K+S 
Sbjct: 170 LHPVLLVANTVSFLLKVILIGGLDFGGAPAW----LWIGAVAMIFVGAWLGEIVNAKVST 225

Query: 257 MIGKKY 262
            + K+ 
Sbjct: 226 PMAKRI 231


>gi|225010299|ref|ZP_03700771.1| protein of unknown function DUF81 [Flavobacteria bacterium
           MS024-3C]
 gi|225005778|gb|EEG43728.1| protein of unknown function DUF81 [Flavobacteria bacterium
           MS024-3C]
          Length = 251

 Score = 40.4 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 86/250 (34%), Gaps = 20/250 (8%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            V +FL+  + G+   G   + V +++      G   S  M + +      +    + + 
Sbjct: 14  FVFAFLAAFILGISKAGVKGIAVLIVTLMALAFGGKSSTGMLMPL------LIVGDIFAI 67

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             + RH       L+ ++  + +  V+   +   + +       A+  +L  + ML    
Sbjct: 68  TYYHRHT--QWHYLRAFLPWMMLGVVIGVFIGKDLPEKSFQMGMAV-TILATLGMLIWWE 124

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
               +  P ++    +  +   ++  +G   G F+N+  L           T+A +   I
Sbjct: 125 KKKIKTIPTHWSFGGFMGIMAGITTMIGNLAGAFSNIYFLAMRLPKNHFIGTAAWLFFFI 184

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
               L   ++    +           ++   LI+LP ++L         + I   +    
Sbjct: 185 NLFKLPFHVFVWKTITPE--------SLKIFLILLPGTVLGLLTGVLFVHKISDAFFRK- 235

Query: 267 FSMIMFTTSF 276
             MI+  TS 
Sbjct: 236 --MILILTSI 243


>gi|124008615|ref|ZP_01693306.1| conserved membrane protein YtnM [Microscilla marina ATCC 23134]
 gi|123985859|gb|EAY25723.1| conserved membrane protein YtnM [Microscilla marina ATCC 23134]
          Length = 300

 Score = 40.4 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 88/264 (33%), Gaps = 18/264 (6%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           +   +  ++    V     G +    GV  GL+     S     +G+   +       T+
Sbjct: 45  AIQQITPHLSWSFVGYIAIGFVVQTIGVAYGLIT----STILLSLGLPPILVSSSVHATA 100

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
                 T+  S   H R G IN K+    +    +  ++ +L+++ ++   +    A++ 
Sbjct: 101 ----VFTNGTSGWAHYRMGNINKKLFWHLLIPGIVGVLLGTLLLTSINGHLIKPFVAVYM 156

Query: 135 LLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
           L MGI++  R      RK     +  +  +V GFL G  G G        ++  G +   
Sbjct: 157 LGMGIVVFSRSLKKKVRKQKTRNITPLA-LVGGFLDGVGGGGWSALITSTLISKGRTPRY 215

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
              T   V   IA  +    +                 +   +  +L   +  +  +  L
Sbjct: 216 TIGTVNTVKFFIAVISTGAFLSLVHLTPK---------DWMLIAGLLIGGVPASYFSAFL 266

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
           +  +  K L     + +   S   
Sbjct: 267 AARLQSKMLMRIVGVTIILLSSYM 290


>gi|260574242|ref|ZP_05842247.1| protein of unknown function DUF81 [Rhodobacter sp. SW2]
 gi|259023708|gb|EEW26999.1| protein of unknown function DUF81 [Rhodobacter sp. SW2]
          Length = 253

 Score = 40.4 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 77/235 (32%), Gaps = 25/235 (10%)

Query: 34  GTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG 93
           G +  + G GGGL+ +P L  A              A+ T+       +  + + +   G
Sbjct: 20  GFVDAIAG-GGGLITLPALLLA--------GASPLQALSTNKVQGTFGAATAAVTYAMAG 70

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC---E 150
            ++++       V        + +   V    L  A  +  + +      +  L      
Sbjct: 71  RVDLRQQLGAAAVALAAGAAGAALAGLVPTEGLRLALPVILIGIAGFFAFKKGLSDDDRA 130

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATSAGVSALIAFP 209
           R+            + G   G +G G G F     ++  G  + KATA +  ++      
Sbjct: 131 RRISPTAFTAFVVPLIGGYDGLIGPGAGAFYMIGFVVLAGHGVLKATAHTKLLNFASNLG 190

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
           AL V    G      P W +G       L +    I    +  +L+  IG + + 
Sbjct: 191 ALAVFAAYG-----APWWGIG-------LAMGVAQIAGARVGARLAMRIGARVIK 233


>gi|221369166|ref|YP_002520262.1| hypothetical protein RSKD131_3329 [Rhodobacter sphaeroides KD131]
 gi|221162218|gb|ACM03189.1| Hypothetical Protein RSKD131_3329 [Rhodobacter sphaeroides KD131]
          Length = 253

 Score = 40.4 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 28/249 (11%), Positives = 76/249 (30%), Gaps = 24/249 (9%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           +   G ++GL G G         +  F L    + +    A+  S  +   + +      
Sbjct: 13  AAAGGFVNGLAGFG---------TALFALAFWLEILPPAQAVAISAVMSVTSGLPGLWAV 63

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM-LKRDRLY 148
           R   +   + +  ++    +   +  L + +V+  +L      F  L G+    +R    
Sbjct: 64  REAISRQPRRILRFVLPALVAVPLGVLALQYVEAGWLKLVIGGFMGLYGLFFAFRRTLPA 123

Query: 149 CERKFPDNYVKYIW-GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
            + + P   +   + G   G  +       G    +    +  +  +        +  I 
Sbjct: 124 LDLRMPVADMAVGFSGGFLGGAASL----SGALPTMWCTLHAWTRQEQRGVMQPFNVTIL 179

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
              +++    G               +  +   LP+++L   +  +L   +         
Sbjct: 180 GATVVLLALQGAYTAET---------LLLIAGALPVTMLAAQVGVRLFARLTDAQFKRLL 230

Query: 268 SMIMFTTSF 276
            +++F +  
Sbjct: 231 ILLLFVSGA 239


>gi|218887897|ref|YP_002437218.1| hypothetical protein DvMF_2812 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758851|gb|ACL09750.1| protein of unknown function DUF81 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 317

 Score = 40.4 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 12/125 (9%), Positives = 36/125 (28%), Gaps = 9/125 (7%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +F+      + GV G  +++P        +    S        T+             
Sbjct: 17  LVAFVVSFFMSMGGVSGAFLLLPFQMSFLGYVNPSVS-------ATNQFYNVVAIPSGVY 69

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLM-ISHVD-KSFLNKAFAIFCLLMGILMLKRD 145
            + R G +   +    I       ++ + + ++++          A     + + M++  
Sbjct: 70  RYIREGRMVWPLTWVVIIGTLPGVLIGAFVRVTYLPNARDFKLFAACVLAYIALRMVRDL 129

Query: 146 RLYCE 150
                
Sbjct: 130 TKKKA 134


>gi|332296163|ref|YP_004438086.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
 gi|332179266|gb|AEE14955.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
          Length = 121

 Score = 40.4 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 33/99 (33%), Gaps = 12/99 (12%)

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
           F  LL+     +   A ATS G           +   + +             N+G  + 
Sbjct: 30  FVPLLISIAKFNQKDAHATSVGAIVPAVIVGAAIYGLNKFD------------NLGDSIY 77

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +    I+   +  +L Y I  K L  GF +++   +   
Sbjct: 78  LGVGGIIGAQIGARLMYKISNKQLKKGFGILLVIVAIRM 116



 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L++      G  SGL G+GGG++ VP+L    +            A  TS+G I P  +
Sbjct: 6   LLLVFIGLCGGMASGLLGIGGGIIFVPLLISIAKFN-------QKDAHATSVGAIVPAVI 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +    +  +   N+           I   + + ++  +    L K F I  +++ I M+ 
Sbjct: 59  VGAAIYGLNKFDNLGDSIYLGVGGIIGAQIGARLMYKISNKQLKKGFGILLVIVAIRMIM 118

Query: 144 R 144
            
Sbjct: 119 S 119


>gi|169631061|ref|YP_001704710.1| hypothetical protein MAB_3982 [Mycobacterium abscessus ATCC 19977]
 gi|169243028|emb|CAM64056.1| Conserved hypothetical protein [Mycobacterium abscessus]
          Length = 259

 Score = 40.4 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 85/263 (32%), Gaps = 36/263 (13%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC-MHVAMGTSLGVI 78
           V  + LI +A+F +G ++ + G G  L+  P L       G    +  M  A+G     +
Sbjct: 3   VQEMVLIALAAFGAGAINVVAGSGT-LITFPTLI----AFGYPPVVATMSNAVG-----L 52

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              S+     +RR  +     LK  I  + +  ++ S ++ H+ +        +  +L  
Sbjct: 53  TVGSMTGVWGYRRELSGQWSRLKWQIPAVLLGALIGSFLLLHLPEKTFVTVVPVLLILAL 112

Query: 139 ILMLKRDRLYC------------ERKFPDNYVKYIWG--MVTGFLSGALGVGGGIFTNLL 184
           +L++   ++                  P   +  + G   + G   G      GI    +
Sbjct: 113 VLVVVGPKIQAWARRRSEAQGRDADHVPPGRMAALTGGNFLVGIYGGYFTAAQGIMQIAV 172

Query: 185 M-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           M      S+ +  A    ++ +    A L      +            V+  A  II   
Sbjct: 173 MGALLPESMQRMNAAKNVLAMITNIVAALAYTIVAFDR----------VSWTAAGIIAAG 222

Query: 244 SILITPLATKLSYMIGKKYLTIG 266
           S +      +    +    L   
Sbjct: 223 SFVGGLAGARWGRRLSPGALRAV 245


>gi|126176482|ref|YP_001052631.1| hypothetical protein Sbal_4297 [Shewanella baltica OS155]
 gi|152998612|ref|YP_001364293.1| hypothetical protein Shew185_0057 [Shewanella baltica OS185]
 gi|125999687|gb|ABN63762.1| protein of unknown function DUF81 [Shewanella baltica OS155]
 gi|151363230|gb|ABS06230.1| protein of unknown function DUF81 [Shewanella baltica OS185]
          Length = 245

 Score = 40.4 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 86/256 (33%), Gaps = 23/256 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  + I A  ++G     F  G G + VP+L      + I  +    + +   L  +   
Sbjct: 7   FWLVAIPAVLITGISKSGFAGGVGGLTVPLL-----ALAISPTTAAALMLP-LLIYMDFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           SV S+         N + L   +    +   +  L+   +++ +L        L  G+  
Sbjct: 61  SVRSWWGQH-----NPRHLWILLPAAIVGIFIAYLLFDRLNEEYLRAILGCVSLGFGLYG 115

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L        +  P   V  + G+  GF S  +   GG   N  +L    +  +  AT+  
Sbjct: 116 LILGDKT--QASPSPLVGRLCGLTAGFTS-FVAHAGGPPLNAYLLPLRLAKAEFLATAVV 172

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             A++    L+     G              NI   L+++P++ L   L   +   I  +
Sbjct: 173 FFAVVNLVKLIPYSLLGQINQE---------NILVSLLLVPLAWLGVKLGLFIQDKINDR 223

Query: 262 YLTIGFSMIMFTTSFV 277
                  ++M      
Sbjct: 224 LFKRIILILMVLVGVR 239


>gi|239908859|ref|YP_002955601.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
 gi|239798726|dbj|BAH77715.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
          Length = 351

 Score = 40.4 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 34/108 (31%)

Query: 66  CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
             HVA+GT L  +A + +     +   G   +      +    +   V ++   ++    
Sbjct: 222 PTHVAVGTDLFEVAISGLYGAASYTYKGRTELVAAIIMLIGAAMGAQVGAVATKYIKGYG 281

Query: 126 LNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGAL 173
           +  AF +  +   I +  +                   M+ G +S   
Sbjct: 282 IRIAFGLAVIGCAISVFLKLLPVYIPSINQICDIIATYMILGLVSALA 329



 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 27/58 (46%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV 121
              M  A+GT +  +A  S++S M H + G ++ K+    +    +   V + MI  +
Sbjct: 50  GFPMAFAIGTDIAHMAGKSLISTMRHGKFGNVDYKLGLIMLVGTVVGFEVGAQMIMWL 107


>gi|196232012|ref|ZP_03130867.1| protein of unknown function DUF81 [Chthoniobacter flavus Ellin428]
 gi|196223734|gb|EDY18249.1| protein of unknown function DUF81 [Chthoniobacter flavus Ellin428]
          Length = 257

 Score = 40.4 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 57/161 (35%), Gaps = 10/161 (6%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           VA  TS   +   +  S    R++     K L  ++ V  +   + S +++H    F  +
Sbjct: 43  VANATSTLALVIGTTGSIFGFRQYIAAIKKWLVRFVPVSLVGGWLGSWLLTHTSDKFFAR 102

Query: 129 AFAIFCLLMGI---------LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
                 L   +          M KR+     +     +V  ++        G  G G GI
Sbjct: 103 LVPFLILFATVLFLAQNLFRQMAKREAATPHKGQTGLWVAIVFQFAVAVYGGYFGAGIGI 162

Query: 180 FTNLLMLFYGA-SIYKATATSAGVSALIAFPALLVRIYSGW 219
                + F G  +I++  A    + +LI   A +V   SG 
Sbjct: 163 LMLASLGFLGLSNIHEMNALKNVLGSLINLVAAVVFTCSGL 203


>gi|300767706|ref|ZP_07077616.1| transport protein [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308179888|ref|YP_003924016.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|300494691|gb|EFK29849.1| transport protein [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308045379|gb|ADN97922.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 185

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 54/129 (41%), Gaps = 2/129 (1%)

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           +   +N KI    I       +V +     + +   N       L+MG ++L +   + +
Sbjct: 2   KIKNVNFKIGNQMIIAAVPGIIVGTFSAQFIPQQLYNWIVGTIFLIMGAMVLIKYVHHSK 61

Query: 151 RKFPD--NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
           +       +    +G+++G + G  G+ GG  T   +   G +  +A  T+  V  +++ 
Sbjct: 62  QTTAGHQPWQAAFFGLLSGLMVGIGGLSGGATTAAGLAILGLTAVEAAGTATYVLTVMST 121

Query: 209 PALLVRIYS 217
            +L+  +++
Sbjct: 122 ISLIGHLFT 130


>gi|225387761|ref|ZP_03757525.1| hypothetical protein CLOSTASPAR_01531 [Clostridium asparagiforme
           DSM 15981]
 gi|225046136|gb|EEG56382.1| hypothetical protein CLOSTASPAR_01531 [Clostridium asparagiforme
           DSM 15981]
          Length = 251

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 79/197 (40%), Gaps = 18/197 (9%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           FL+G +  + G GGG++ +P    A         +  H A+GT+    +  +V+S + + 
Sbjct: 12  FLAGLVDSIAG-GGGIISLPAYLLA--------GVPAHTALGTNKLGSSMGTVVSTVRYA 62

Query: 91  RHGTINMKILKDWIFVL--PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY 148
           ++G +  K        +   I + + + +   V  + +     +   ++   +L   R+ 
Sbjct: 63  KNGYLKGKAAMAACSAVAAIIGSSIGARLALMVPDNVIRNMMLVVLPIVAAYVLFDKRMG 122

Query: 149 CERKFPD------NYVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAG 201
              K  D        +  +  ++ G   G  G G G F  L++       +  A+A +  
Sbjct: 123 DSEKTGDISRQRMFVLSVLAALLVGGYDGFYGPGTGTFLLLVLTGVARMDVRSASAQTKV 182

Query: 202 VSALIAFPALLVRIYSG 218
           ++      AL+  I+SG
Sbjct: 183 INLSSNTAALVTFIFSG 199


>gi|114705533|ref|ZP_01438436.1| putative integral membrane protein [Fulvimarina pelagi HTCC2506]
 gi|114538379|gb|EAU41500.1| putative integral membrane protein [Fulvimarina pelagi HTCC2506]
          Length = 266

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 78/256 (30%), Gaps = 21/256 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           + C  I A FL G   G FG    LV VP+++           I    A G  L ++   
Sbjct: 21  FYCAAIPAVFLVGLSKGGFGGTMALVGVPMMALV---------ISPVAAAGILLPILILM 71

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            +++       GT +  +L D +    +   +  L  ++     ++    +  L      
Sbjct: 72  DLIALYAW--RGTFSKTVLADMLPASVLGISLGYLTSAYAPPDAVSIVVGLLSLWFVTNW 129

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
               R        +    + WG+  G+ S     GG  F   ++    A    A  T+  
Sbjct: 130 FLHARHAMTPVPENRRRAWAWGVGAGYGSFVAHAGGPTFQIYVLPLRLAPPVYA-GTAVV 188

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             A+     L+     G         SL      A+  + PI+         L   +  +
Sbjct: 189 FFAVTNVAKLIPYYALGQFSYENLATSL------ALFPVAPIATFC---GVWLVKRLEPE 239

Query: 262 YLTIGFSMIMFTTSFV 277
                   ++      
Sbjct: 240 LFYRIVYGLLVPVGLK 255


>gi|90022559|ref|YP_528386.1| hypothetical protein Sde_2917 [Saccharophagus degradans 2-40]
 gi|89952159|gb|ABD82174.1| protein of unknown function DUF81 [Saccharophagus degradans 2-40]
          Length = 247

 Score = 40.1 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 62/178 (34%), Gaps = 13/178 (7%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           G G+  VP+L+ AF             + G +L ++    + +   + RH      +L  
Sbjct: 30  GAGMAAVPLLALAFGG---------KASSGIALPMLIMADIFAVAYYHRHAN--WGLLLK 78

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW 162
                    ++ + M + +D         I   +   +ML  +R   ER  P++      
Sbjct: 79  LFPWAAGGVIIGTAMGTFIDDQQFRFLMGIIIFISLGIMLWMERGNKER-VPNSLAFTAS 137

Query: 163 GMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
             + G  +  +G   G    L +L       +   T+A    ++    +   I+ GW 
Sbjct: 138 MGLLGGFTTMVGNLAGPVMALYLLSSRLPKNEYIGTAAWFFMVVNVFKVPFHIW-GWH 194


>gi|126730335|ref|ZP_01746146.1| hypothetical protein SSE37_11284 [Sagittula stellata E-37]
 gi|126709068|gb|EBA08123.1| hypothetical protein SSE37_11284 [Sagittula stellata E-37]
          Length = 250

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 81/242 (33%), Gaps = 22/242 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   + A   +G   G FG G       +L+               VA+G  L ++    
Sbjct: 9   IAFCLPAVVFAGISKGGFGSGVAFASSSILALVLP---------PEVAVGLMLPLLMMMD 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA-IFCLLMGILM 141
           V S   + +    + ++ K  +      T++ +L  +  D   +      +  L +G   
Sbjct: 60  VTSLWAYWKKW--DWEVAKILLVGSIPGTILGALFWAWADPDAIRFLIGSVALLFVGWQA 117

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
            +   L               G+V GF S  +   GG    + ML  G S     AT+  
Sbjct: 118 ARSTGLIRLGMRFGPKTGVTSGVVLGFTS-FVSHAGGPAAAVYMLGQGISKTSYQATTVL 176

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           V   +         + G   +           +   LI++P +IL T +  +  +M+ ++
Sbjct: 177 VFWAVNLFKSFFYAFMGIFTHET---------LMLDLILVPFAILGTWIGIRAHHMLPER 227

Query: 262 YL 263
             
Sbjct: 228 VF 229


>gi|148544866|ref|YP_001272236.1| hypothetical protein Lreu_1660 [Lactobacillus reuteri DSM 20016]
 gi|184154204|ref|YP_001842545.1| transport protein [Lactobacillus reuteri JCM 1112]
 gi|227364006|ref|ZP_03848106.1| integral membrane protein [Lactobacillus reuteri MM2-3]
 gi|325683211|ref|ZP_08162727.1| hypothetical protein HMPREF0536_11649 [Lactobacillus reuteri
           MM4-1A]
 gi|148531900|gb|ABQ83899.1| protein of unknown function DUF81 [Lactobacillus reuteri DSM 20016]
 gi|183225548|dbj|BAG26065.1| transport protein [Lactobacillus reuteri JCM 1112]
 gi|227070928|gb|EEI09251.1| integral membrane protein [Lactobacillus reuteri MM2-3]
 gi|324977561|gb|EGC14512.1| hypothetical protein HMPREF0536_11649 [Lactobacillus reuteri
           MM4-1A]
          Length = 261

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 48/121 (39%), Gaps = 6/121 (4%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I+  F+ G  SG F  G G++M+ +L+   +      +  +          +  T+  
Sbjct: 145 LSIIGIFIVGIYSGFFNAGAGVLMLTLLTVINRQKSFAVNNALKN------VAMTVTNTT 198

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S++      TI    +   +    I   +  +++ H+    +     +  L++ + ++ R
Sbjct: 199 SWIVFALETTIYWNYVIPLMIGNVIGGYLGPIIVRHLPGRLMQIIVGVGSLILAVSLVIR 258

Query: 145 D 145
           +
Sbjct: 259 N 259



 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 24/219 (10%), Positives = 63/219 (28%), Gaps = 22/219 (10%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +A  TS       +  S     +    N + L   + ++   +V+ + ++  V   +  +
Sbjct: 44  MANVTSAFSTVTGNYSSVFSSFKELEHNRRQLWIILPLVFAGSVIGAFLLFAVPSKWFAE 103

Query: 129 AFAIFCLLMGILMLKRDRLYCE------------RKFPDNYVKYIWGMVTGFLSGALGVG 176
              +   L GI++L                    +     ++  I   + G  SG    G
Sbjct: 104 LVPLCIALAGIILLFPHHPKQSTGTMAGNSKLFGKSRIGQFLSIIGIFIVGIYSGFFNAG 163

Query: 177 GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGA 236
            G+    L+         A   +   +  +        I                +    
Sbjct: 164 AGVLMLTLLTVINRQKSFAVNNALK-NVAMTVTNTTSWIVFALETT---------IYWNY 213

Query: 237 VLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           V+ ++  +++   L   +   +  + + I   +     +
Sbjct: 214 VIPLMIGNVIGGYLGPIIVRHLPGRLMQIIVGVGSLILA 252


>gi|256822935|ref|YP_003146898.1| hypothetical protein Kkor_1718 [Kangiella koreensis DSM 16069]
 gi|256796474|gb|ACV27130.1| protein of unknown function DUF81 [Kangiella koreensis DSM 16069]
          Length = 251

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 62/187 (33%), Gaps = 14/187 (7%)

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           G  N K+L   I    I   +       + + ++     +  +   ++ L  ++    +K
Sbjct: 67  GQYNRKLLIALIPASLIGVAIGYATADQLSEDWIRFILGVIAIAFVLMQLLPNKESNNQK 126

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA--TATSAGVSALIAFPA 210
            P+  +  + G   GF S     GG     L M      + ++   AT+    A I    
Sbjct: 127 KPNTVLAAVAGASAGFTSFLAHAGG---PPLNMFLLKQKLQRSEYLATAVYFFAAINLFK 183

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           L   I        +         +    +++P++++   L   L   + +K       ++
Sbjct: 184 LYPYIALEQFNTQI---------LWQGALLIPVALIGVALGKWLQAHLSQKMFLNIIYVL 234

Query: 271 MFTTSFV 277
           +F     
Sbjct: 235 LFGLGCK 241


>gi|119503449|ref|ZP_01625532.1| hypothetical protein MGP2080_02880 [marine gamma proteobacterium
           HTCC2080]
 gi|119460511|gb|EAW41603.1| hypothetical protein MGP2080_02880 [marine gamma proteobacterium
           HTCC2080]
          Length = 247

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 61/164 (37%), Gaps = 11/164 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I A  + G ++ + G GG ++ VPV+            +   +A GT+   I   ++ +
Sbjct: 9   LIAAGIVGGAINVMAG-GGSVITVPVMVFL--------GVPGPIANGTNRIAILAQNLTA 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
                R G  N ++            ++ +     +  +  N A A   L   +LM +  
Sbjct: 60  VGTFMRGGQGNFRLSITLALCALPGALLGAWTGVQLSGAQFNTALAAVMLATLVLMYRGG 119

Query: 146 -RLYCERKFPDNYVKY-IWGMVTGFLSGALGVGGGIFTNLLMLF 187
                  + P N +   +  ++ GF  G + +G G     ++  
Sbjct: 120 ATPQTGDQQPRNLLWGHLLMVLAGFWGGFIQIGVGFILMPILNR 163


>gi|108803355|ref|YP_643292.1| hypothetical protein Rxyl_0506 [Rubrobacter xylanophilus DSM 9941]
 gi|108764598|gb|ABG03480.1| protein of unknown function DUF81 [Rubrobacter xylanophilus DSM
           9941]
          Length = 244

 Score = 40.1 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 67/187 (35%), Gaps = 15/187 (8%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTIN 96
           SGL G G  LV VP+L         D +  + + M  SL + A     S+ +      ++
Sbjct: 17  SGLTGFGLALVGVPLLLFV-----YDPATVVVLIMAFSLLINAAVVQDSWRK------VD 65

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDN 156
            ++               + ++       L  A  +  +L  +LML+  RL         
Sbjct: 66  RRMAAALSPPALAGVAGGTEVLRVASPEQLRLAVGVLVVLSALLMLRDVRLPGTG---SR 122

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
               + G+V+G LS ++G+       LL+   G       ATSA    +++         
Sbjct: 123 LAPAVAGLVSGALSTSVGLA-APPVVLLLAARGLPKAAFRATSALFFLVMSVFGAAALAA 181

Query: 217 SGWGLNG 223
            G    G
Sbjct: 182 RGLIPEG 188


>gi|308272873|emb|CBX29477.1| hypothetical protein N47_J04580 [uncultured Desulfobacterium sp.]
          Length = 351

 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-- 121
              M  A+GT +  +A  S++S M H R G ++ ++    +    +     + MI  +  
Sbjct: 50  GFPMAFAIGTDIAHMAGKSLISTMRHGRFGNVDYRLGMIMLVGTVVGFECGAQMIMWLER 109

Query: 122 ---DKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
               +  +   + +  +L+  ++         ++
Sbjct: 110 LGKVEFIVRWMYVVLLILIAWMVFADVAKKRSKE 143



 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 37/108 (34%), Gaps = 3/108 (2%)

Query: 66  CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
             H+A+GT L  +  + +     +   G   +  +   +    I   + ++   ++    
Sbjct: 222 PTHIAVGTDLFEVMISGLYGAGTYTFKGRTELVAVVIMLCGAAIGAQIGTVATKYIKGYG 281

Query: 126 LNKAFAIFCLLMGILMLKRDRLY---CERKFPDNYVKYIWGMVTGFLS 170
           +  AF I  +   I ++ +         +   D     +   + G LS
Sbjct: 282 IRIAFGIAVIGCCISIIMKLIPRYVAGTKAMMDTCSTVLILGLVGALS 329


>gi|293381084|ref|ZP_06627105.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
 gi|290922384|gb|EFD99365.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
          Length = 252

 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 27/231 (11%), Positives = 75/231 (32%), Gaps = 21/231 (9%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +GI        A  T+   +  TS+ S +   +    + K +  +     + ++
Sbjct: 31  YPVLLAVGIPPVF----ANVTNDAALIWTSIGSTVSSTKELKGHWKQVWFYTIFTVVGSI 86

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK----YIWGMVTGF 168
           +  +++         KA   F    GI+++   + +               +I  ++ G 
Sbjct: 87  LGCILLLSFPPKIFEKAVPFFIAFSGIMIIVSGKRHSLNTQEQPTWLKIIYFIALLIMGM 146

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKAT-ATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +G  G  GG+   +L+ +     +    A    +       AL++ +++          
Sbjct: 147 YTGYFGAAGGVIVLVLLTYITNDKFIVINAIKNVICGFANLVALIIFMFTS--------- 197

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               +     + +     +   +   +   + +K + I  + + F  +  F
Sbjct: 198 ---HIYWLQAIPLAIGMFIGGYIGPAILRRVPEKPVRIFIATLAFIQAGYF 245


>gi|226362764|ref|YP_002780542.1| hypothetical protein ROP_33500 [Rhodococcus opacus B4]
 gi|226241249|dbj|BAH51597.1| hypothetical membrane protein [Rhodococcus opacus B4]
          Length = 251

 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 41/114 (35%), Gaps = 6/114 (5%)

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
           ++ K L+       I   +    ++ +    +     +  +   + M     +   +  P
Sbjct: 74  VHWKSLRWLFAGTLIGMPLGMWPLTQLSGDLVRVLLGVAIIGSAVAM---AAVPDRQSLP 130

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
                   G+ +G L+G   +GG      +++++ AS + A   ++ V   +  
Sbjct: 131 GPGTTAATGVASGLLNGGFALGG---PPAVLMYFSASSHVAAGRASLVVFFLVI 181


>gi|325981868|ref|YP_004294270.1| hypothetical protein NAL212_1198 [Nitrosomonas sp. AL212]
 gi|325531387|gb|ADZ26108.1| protein of unknown function DUF81 [Nitrosomonas sp. AL212]
          Length = 238

 Score = 40.1 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 70/164 (42%), Gaps = 14/164 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I +A+ ++ T++ + G GGG++++PVL +AF   G+ +++ M+        V+     
Sbjct: 5   LFISLAALVASTVAAIAGTGGGIILLPVLIEAF---GVREAVPMY-------AVVQLIGN 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           MS +   R   I + ++  +       +++ + + + +  S L      F +   +   +
Sbjct: 55  MSRVALNRQ-LIQLPVVFWFCIGAIPFSILGAWLFTKIPDSKLLNIIGAFLIFTVV--WR 111

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
             R +    F   Y  +I G+ +  +S   G  G       + +
Sbjct: 112 HWRGHTIASFNPKYFAFIGGIFS-VISAIAGSAGPFLAPFYLSY 154


>gi|304412423|ref|ZP_07394030.1| protein of unknown function DUF81 [Shewanella baltica OS183]
 gi|307305766|ref|ZP_07585512.1| protein of unknown function DUF81 [Shewanella baltica BA175]
 gi|304349258|gb|EFM13669.1| protein of unknown function DUF81 [Shewanella baltica OS183]
 gi|306911259|gb|EFN41685.1| protein of unknown function DUF81 [Shewanella baltica BA175]
          Length = 245

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 86/256 (33%), Gaps = 23/256 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  + I A  ++G     F  G G + VP+L      + I  +    + +   L  +   
Sbjct: 7   FWLVAIPAVLITGISKSGFAGGVGGLTVPLL-----ALAISPTTAAALMLP-LLIYMDFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           SV S+         N + L   +    +   +  L+   +++ +L        L  G+  
Sbjct: 61  SVRSWWGQH-----NPRHLWILLPAAIVGIFIAYLLFDRLNEEYLRAILGCVSLGFGLYG 115

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L        +  P   V  + G+  GF S  +   GG   N  +L    +  +  AT+  
Sbjct: 116 LILGDKT--QASPSPLVGRLCGLTAGFTS-FVAHAGGPPLNAYLLPLRLAKAEFLATAVV 172

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             A++    L+     G              NI   L+++P++ L   L   +   I  +
Sbjct: 173 FFAVVNLVKLIPYSLLGQINQE---------NILVSLLLVPLAWLGVKLGLFIQDKINDR 223

Query: 262 YLTIGFSMIMFTTSFV 277
                  ++M      
Sbjct: 224 LFKRIILILMVLVGVR 239


>gi|149927897|ref|ZP_01916147.1| hypothetical protein LMED105_07433 [Limnobacter sp. MED105]
 gi|149823336|gb|EDM82569.1| hypothetical protein LMED105_07433 [Limnobacter sp. MED105]
          Length = 243

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 79/258 (30%), Gaps = 29/258 (11%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L+ +A+F++ +++   G+GGG+V+      A     +  ++ + +     L    
Sbjct: 1   MTLVVLLSLAAFVTSSITAAMGIGGGVVL-----LALMAQVVPPALLIPLHGAAQLMS-- 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                +     +   IN   +K ++    +   + + +  ++          +F +L   
Sbjct: 54  ----NTNRVLVQRQFINWNYIKPFLLGSVVGGALITPLALYMPVPVGQVLLGLFIVLA-- 107

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
                           N+     G +T  LS  LG  G      ++            T 
Sbjct: 108 ------TWKSAWLRLANWPPAASGGITTGLSLVLGATG-PLVMSVLPKSDWERQVVVGTH 160

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                +     ++        L               +L I   ++    L  KL   + 
Sbjct: 161 GMAMVIQHGIKVIAFSTLNVSLME---------YWPLLLGIGVATLAGNLLGAKLLARVP 211

Query: 260 KKYLTIGFSMIMFTTSFV 277
           +   TI  + ++   +  
Sbjct: 212 EDKFTIILNWLLTALALR 229


>gi|225377010|ref|ZP_03754231.1| hypothetical protein ROSEINA2194_02654 [Roseburia inulinivorans DSM
           16841]
 gi|225211146|gb|EEG93500.1| hypothetical protein ROSEINA2194_02654 [Roseburia inulinivorans DSM
           16841]
          Length = 262

 Score = 40.1 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 63/190 (33%), Gaps = 18/190 (9%)

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDK--------SFLNKAFAIFCLLMGILMLKRD 145
            + MK          +  ++   + S+V            +     +   L  ++     
Sbjct: 70  HVTMKTGFPLAIGAAVGGLIGKWLFSYVKSLSSDPNKVGAVQALCLLIVTLGTLIYTIYK 129

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT-NLLMLFYGASIYKATATSAGVSA 204
                 +     V  + G+  G +S  LG+GGG     +L  F+  S   A   S  +  
Sbjct: 130 AKIKTYEVDSAIVCVLIGIFLGIMSSFLGIGGGPINLVVLFFFFSMSTKLAAENSLYIIF 189

Query: 205 LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
                +L+  I +G     +P + +G      +++++   I        ++  I +K + 
Sbjct: 190 FSQIASLISTIVTG----SVPDFQIG-----VLVLMVAGGIAGGICGRAINKKIDEKTVD 240

Query: 265 IGFSMIMFTT 274
             F  +M   
Sbjct: 241 KLFIALMVLM 250


>gi|229493539|ref|ZP_04387324.1| permease [Rhodococcus erythropolis SK121]
 gi|229319500|gb|EEN85336.1| permease [Rhodococcus erythropolis SK121]
          Length = 255

 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 88/238 (36%), Gaps = 26/238 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L++ A+  +G +  + G GGGL+++P L        +   +    A+ T+       +  
Sbjct: 8   LLMTAATAAGWVDAVVG-GGGLILLPALFL------VAPQLTPQAALATNKLTAFTGTSA 60

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +     R   +  + +     +  +T    +  +S +DK +      +  + + + +  R
Sbjct: 61  AVYTFSRRIPMEWRQMAPAAALAAVTAACGAAAVSLIDKKYFIPIVMVVLVAVAVFVTMR 120

Query: 145 DRLYCE------RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATA 197
             L          +     V  +   + G   G LG G G F  +    F G    +   
Sbjct: 121 PTLGTTIATHRPTQRKTVLVLLLSAGLIGLYDGLLGPGTGTFLIISFATFLGTEFVR--- 177

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
            SA ++ +I   +    +   + + G   WSLG       L +   +IL   + ++++
Sbjct: 178 -SAAMAKVINLGSNFGALAY-FAVTGHVWWSLG-------LAMAVCNILGAVIGSRMA 226


>gi|152982639|ref|YP_001353599.1| hypothetical protein mma_1909 [Janthinobacterium sp. Marseille]
 gi|151282716|gb|ABR91126.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 248

 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 73/196 (37%), Gaps = 10/196 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L++    L+G L G  G+G G+++VP+L+           I +  A+  +    A  ++
Sbjct: 8   ALMLPTILLTGALIGACGIG-GVLLVPILTHL-------GGIPLPQAIAAASLSFALPAL 59

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++    RR   +  + L   +    +     +L +  +    L     +  L  G   L+
Sbjct: 60  VALGPMRRQPELLQRCL-PLLGGALLGAAGGALTVHLLSAGSLMFGVMLLVLFAGWRGLR 118

Query: 144 RDRLYCERK-FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +  +   F      +I G + GF S   G GG +    L++     +  +   +  +
Sbjct: 119 PLDIAAQPAAFLSVLSLFILGALIGFGSALTGTGGPVLILPLLMLMRQPLSFSVVAAQAI 178

Query: 203 SALIAFPALLVRIYSG 218
              IA  +  V    G
Sbjct: 179 QFPIALASSTVHALEG 194


>gi|301122683|ref|XP_002909068.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099830|gb|EEY57882.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 483

 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 49/120 (40%), Gaps = 8/120 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +    +   ++G ++G+FGVGGG++  P++ +          I   VA  T+  +I  +
Sbjct: 345 MVVYFPLGCAVAGIVAGMFGVGGGIITGPIMIEL--------GIVPEVASSTTALMILYS 396

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  +  +      +          V  + T  + ++I    +    ++  + C+   +L+
Sbjct: 397 SAAATAKFAVFKMVAWDWALFLCAVAFVVTSASQVVILGFVRRTGRQSIIVLCIATAVLI 456


>gi|90418915|ref|ZP_01226826.1| putative permease [Aurantimonas manganoxydans SI85-9A1]
 gi|90336995|gb|EAS50700.1| putative permease [Aurantimonas manganoxydans SI85-9A1]
          Length = 252

 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 77/256 (30%), Gaps = 21/256 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  + I A  L G   G FG    LV VP+++           I    A    L V+   
Sbjct: 7   FYLVAIPAVLLVGLAKGGFGGALTLVGVPLMAVV---------ISPVAAAAIMLPVLVAM 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            ++  +     GT + +++   +       ++  L  + V    +     +  L      
Sbjct: 58  DMVGLVAW--RGTFDRRVIAIMLPASFGGVLLGYLTATMVSADGIRLVIGLLALWFAAEW 115

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
             R R   E +  +      WG + GF S  +   GG    + ++           TS  
Sbjct: 116 FWRSRHQLEPRPRNTAKSLSWGAIAGF-SSFVSHAGGPPFQVAVMPLRLPPPVYAGTSVL 174

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             A      L+     G              N+    +++P++   T     L   +  K
Sbjct: 175 FFASTNAVKLIPYFLLGQFSAD---------NLATSAVLMPLAPFATLAGVWLVRRVDPK 225

Query: 262 YLTIGFSMIMFTTSFV 277
                  M++      
Sbjct: 226 AFYWIAYMVLVPVGMK 241


>gi|332534639|ref|ZP_08410471.1| protein of unknown function DUF81 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035919|gb|EGI72400.1| protein of unknown function DUF81 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 252

 Score = 40.1 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 85/258 (32%), Gaps = 28/258 (10%)

Query: 11  MVFLSKDCV-VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           M FL  D + +    L+++ +  +   S  FG GGGL++   L      M +   + +H 
Sbjct: 1   MDFLLPDSMSLFLFLLMMITAGFTSFTSAAFGAGGGLML---LVVMASFMPMAVVVPVH- 56

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
                   +      +         I+  +   +     +   ++S +I  +    +   
Sbjct: 57  -------GLVQLGSNANRFLLSFKHIDKSMFVYFALGGLVGAGLSSFVIDDISLDAMKLV 109

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            AIF + +              K      + + G +T F+S  +G  G +  + L +   
Sbjct: 110 VAIFVIYLLW------GKTPPVKLTSKLWRMVAGGITTFVSMFVGASGPLVGSCLYINNY 163

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             +      S+ +S      A++      +G  G   W      +  V+ ++    + T 
Sbjct: 164 EKLKFTATFSSIMSVQHLLKAVI------YGAVGFSFWQ----WMPLVIAMIISGAVGTW 213

Query: 250 LATKLSYMIGKKYLTIGF 267
              KL   +        F
Sbjct: 214 FGIKLLKSMSGDKFKRIF 231


>gi|78779370|ref|YP_397482.1| hypothetical protein PMT9312_0986 [Prochlorococcus marinus str. MIT
           9312]
 gi|78712869|gb|ABB50046.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
           9312]
          Length = 270

 Score = 40.1 bits (93), Expect = 0.38,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 99/279 (35%), Gaps = 26/279 (9%)

Query: 4   LLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD 63
           +LY  + +V    + +  +I + +++ F S T S + G G GL+ +P L           
Sbjct: 1   MLYFLTTLVDNVDNSLYKFISIFLIS-FFSNTFSAISGGGAGLLQLPALILF-------- 51

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            I  + A+ +         +   + + +    ++++    +       ++ + ++ ++ +
Sbjct: 52  GIPYYQALASHKLATVALGIGGSLRNYKSLRNDIRVAWLILIFGLPGVILGASIVEYISE 111

Query: 124 SFLNKAFAIFCLLMGILMLKRDRL-----YCERKFPDNYVKYIWGMVTGFLSGALGVGGG 178
            +L     I  +L+    + +  L       +          I+  + G L+G++  G G
Sbjct: 112 KYLYLFLGIISILLAFYSILKSDLGLSSGKAKFNSVYKIRFLIFIFLIGILNGSISSGTG 171

Query: 179 IFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
           +   +L++  +G    +A    +     +              +  +P  +L        
Sbjct: 172 LLVTILLIKTFGMDFLRAI---SLTFLTVGIFWNFTGAVFLSKIGSIPSNTL-------- 220

Query: 238 LIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           +I++  S         LS + G   +   F+ +      
Sbjct: 221 IILIIGSFTGGYFGAHLSKLKGNILIKKTFTSVCLFVGI 259


>gi|118348628|ref|XP_001007789.1| hypothetical protein TTHERM_00069510 [Tetrahymena thermophila]
 gi|89289556|gb|EAR87544.1| hypothetical protein TTHERM_00069510 [Tetrahymena thermophila
           SB210]
          Length = 549

 Score = 40.1 bits (93), Expect = 0.38,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 52/141 (36%), Gaps = 16/141 (11%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +  ++++A   +G ++G  GVG GL +VP+L       G+   +         L +   
Sbjct: 412 THYFVVLLAGLAAGLVAGTVGVGAGLTLVPLLLSI----GVHPQVVAATCGFNYLFIATT 467

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFCL 135
           T +  F  H        +I+   +       ++   + ++V+K       +   F +  L
Sbjct: 468 TIIQVFTSHYLSYA---QIVLFSLLSFVGGFIIAKCIYNYVEKRKNGYALVFIVFGLCIL 524

Query: 136 ----LMGILMLKRDRLYCERK 152
                M I +L    L  +  
Sbjct: 525 KRIFYMDIRVLFNKHLSAKHN 545



 Score = 38.9 bits (90), Expect = 0.92,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 48/125 (38%), Gaps = 7/125 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + + I+  F+ G +S + G+GGG++ VP+++           +   ++     G     S
Sbjct: 36  VIVYILIPFIIG-VSNVGGLGGGIIKVPLITVML---NYPSKVATFISYCILFGSSVVHS 91

Query: 83  VMSFMEHR---RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +   +         I+  I+     ++ + T    L+   + +        ++  L+  
Sbjct: 92  TIIIFKKHPLFNKPIIDYNIVLVINPMVLLGTNAGILLNVLMPEIVAGVIICVYLSLIAP 151

Query: 140 LMLKR 144
            +L +
Sbjct: 152 YILFK 156


>gi|182679744|ref|YP_001833890.1| hypothetical protein Bind_2832 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182635627|gb|ACB96401.1| protein of unknown function DUF81 [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 246

 Score = 40.1 bits (93), Expect = 0.38,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 48/145 (33%), Gaps = 10/145 (6%)

Query: 44  GGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDW 103
           GG   + VL++    + I        A    L V+    V+S   + R    + + L+  
Sbjct: 24  GGFTGLSVLAQPILALAISP----MQATAIILPVLMIQDVVSLAAYWRRW--DNEQLRLL 77

Query: 104 IFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWG 163
           +    +  +   L  + +  + +     +  L      L +      +         +W 
Sbjct: 78  LPGALVGVIAGYLFAASISDAAVEAGIGVLALAEATRQLLKRGSSSRKAQAGRQSGRLWS 137

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFY 188
           +++GF S     GG       M++ 
Sbjct: 138 VLSGFTSMIANAGG----PPFMIYL 158


>gi|119355971|ref|YP_910615.1| hypothetical protein Cpha266_0121 [Chlorobium phaeobacteroides DSM
           266]
 gi|119353320|gb|ABL64191.1| protein of unknown function DUF81 [Chlorobium phaeobacteroides DSM
           266]
          Length = 318

 Score = 40.1 bits (93), Expect = 0.38,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 91/265 (34%), Gaps = 44/265 (16%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           ++ L+   SF+ G  S L GVGGG++ VP++S  F          +    G  L V    
Sbjct: 45  WVILLFAFSFILGIFSVLAGVGGGVLFVPIVSGFFPF-------HLDFIRGAGLVVALTG 97

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ +     R G  ++K+      V  I+++  +L    +  + +     +  + +  +M
Sbjct: 98  ALSAGAPLMRKGLADLKLGLPMALVGSISSIAGALAGLAMPVAMVQLLLGLSIMFIAGIM 157

Query: 142 LKRDR--------------------LYCERKFPDNYVKYIWGMVTGFL---------SGA 172
           +K  +                    +Y +     +    I     G              
Sbjct: 158 IKSGKSGYPEVKEPDTLSKILHISGIYHDEAMSKDIAWQIHRTPIGLFLFMIIGFIGGMF 217

Query: 173 LGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
               G     +  L  G  +  A ATS  V ++    A  + I+ G  L          +
Sbjct: 218 GMGAGWANVPVFNLLMGVPLKVAVATSGLVLSINGAAAAWIYIFKGALLP--------LI 269

Query: 233 NIGAVLIILPISILITPLATKLSYM 257
            + AV  I+  S +   L TK++  
Sbjct: 270 AVPAVAGIMLGSKIGAGLLTKVNTR 294


>gi|300782205|ref|YP_003762496.1| hypothetical protein AMED_0271 [Amycolatopsis mediterranei U32]
 gi|299791719|gb|ADJ42094.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
          Length = 257

 Score = 40.1 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 83/255 (32%), Gaps = 35/255 (13%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV-IAP 80
           +  +++VA   +GT++ + G G  LV  PVL       G            TS  + +AP
Sbjct: 5   HALIVVVAGIWAGTINAVVGSGT-LVTFPVLVAL----GYPPVTAT-----TSNAIGLAP 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            ++     +R   T   +    +        +  ++++  + K        +   L  IL
Sbjct: 55  GTLSGAWGYRHELTGYWRQTAKFAVASFFGAIGGTILLLSLPKDAFEAVVPVLVGLAVIL 114

Query: 141 MLKRDRL----------YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYG 189
           ++ + ++            E   P   + +    + G   G      G+    +M +   
Sbjct: 115 VIVQPKVSKWVAKRREENGEEHKPGPLLMFFI-FLIGIYGGYFTAAQGVMLMAVMGMLLS 173

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
             + K       ++A++   A ++  +               V+   VL +   S     
Sbjct: 174 EPLQKLNGVKNVLAAVVNLVAGIIYAFVAP------------VSWAVVLWLAVGSTAGGF 221

Query: 250 LATKLSYMIGKKYLT 264
           L  K+   +    L 
Sbjct: 222 LGAKIGRRLPPAVLR 236


>gi|318041050|ref|ZP_07973006.1| hypothetical protein SCB01_05049 [Synechococcus sp. CB0101]
          Length = 252

 Score = 40.1 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 58/147 (39%), Gaps = 2/147 (1%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTS 115
           F  + +   +  H A+ TS   I PT++     H R G +  + +           +V S
Sbjct: 30  FSPLLLAVGLTPHQALATSTLAILPTTLAGSWAHLRSGQVPARAVLAIAGGAIAGALVFS 89

Query: 116 LMISHVDKSFLNKAFAIFCLLMGILML-KRDRLYCERKFPDNYVKYIWGMVTGFLSGALG 174
                ++   L    A+   ++ +++  +R                  G+V G+ SG LG
Sbjct: 90  QAGDDLEDWHLLGLQALMYGVLALVIAPRRSDQAEAPDHLPLAGLSGVGLVAGWSSGLLG 149

Query: 175 VGGGIFTNLLMLF-YGASIYKATATSA 200
           VGGG+    LM+   G  +Y+A   S 
Sbjct: 150 VGGGLVMVPLMVQGLGIRVYQAIRLST 176


>gi|116748073|ref|YP_844760.1| hypothetical protein Sfum_0626 [Syntrophobacter fumaroxidans MPOB]
 gi|116697137|gb|ABK16325.1| protein of unknown function DUF81 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 356

 Score = 40.1 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 31/107 (28%)

Query: 66  CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
             HVA+GT L  +  + +     +   G   +      +    I   + ++   ++    
Sbjct: 222 PTHVAVGTDLFEVMISGLYGAATYTYKGRTELVAAIIMLIGAAIGAQIGTVATKYIKGYG 281

Query: 126 LNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGA 172
           +  AF    +   I +  +       +            V   +S  
Sbjct: 282 IRIAFGCAVIGCAISVALKLIPTYFPQSKAFCDVAATFFVLAVVSAL 328



 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 43/107 (40%), Gaps = 13/107 (12%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GG  ++ P L+             M  A+GT +  +A  S++S M H + G ++ K+   
Sbjct: 37  GGAWMVTPGLNIL--------GFPMAFAIGTDIAHMAGKSLISTMRHGKFGNVDYKLGMI 88

Query: 103 WIFVLPITTVVTSLMISHV-----DKSFLNKAFAIFCLLMGILMLKR 144
            +    I   + + MI  +      +  +   + +  +L+  ++   
Sbjct: 89  MLVGTVIGFEIGAQMIMWLERIGSVELVVRWLYILLLMLITYMVFGD 135


>gi|239817382|ref|YP_002946292.1| hypothetical protein Vapar_4415 [Variovorax paradoxus S110]
 gi|239803959|gb|ACS21026.1| protein of unknown function DUF81 [Variovorax paradoxus S110]
          Length = 252

 Score = 40.1 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 82/261 (31%), Gaps = 30/261 (11%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +  + + A  L G     FG G G + VP++  A  +      +   + +   LG+ A 
Sbjct: 10  HFYAVAVPAVLLLGISKSGFGAGFGSLAVPLMGLAVTVPQAAAILMPLLLLMDLLGLAAF 69

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                          +  +LK  I    + TV+ +L+   +    +     +F LL    
Sbjct: 70  -----------RNDFDRALLKFLIPFGLLGTVIGTLLFRTLSAHTVAGIVGVFTLLFLAQ 118

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
            L       +   P   V      V+GF S     GG      ++      +   TAT A
Sbjct: 119 RLV-FPPKPDDPLPSRAVGAALTAVSGFTSFIAHAGGPPINAYVIPLRLKPVVF-TATMA 176

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT----KLSY 256
               ++     +   +            LG +++  +       + + PL      +++ 
Sbjct: 177 YFFFVVNLSKWIPYAW------------LGLIDLRTLAT-SAALMPLAPLGVWVGIRIAR 223

Query: 257 MIGKKYLTIGFSMIMFTTSFV 277
            I   +      + M  T   
Sbjct: 224 RIDATWFYRFVYLGMLLTGLK 244


>gi|271499427|ref|YP_003332452.1| hypothetical protein Dd586_0859 [Dickeya dadantii Ech586]
 gi|270342982|gb|ACZ75747.1| protein of unknown function DUF81 [Dickeya dadantii Ech586]
          Length = 242

 Score = 40.1 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 94/253 (37%), Gaps = 24/253 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            LI++    +G++SG+ G GG ++++P L+ AF       +    +A+  ++  I+   +
Sbjct: 4   ILILILGLFAGSVSGIVGTGGSIILLPALAWAFS----PQAAVPIMAIAATMSNISKVIL 59

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                      IN++ L  +       +V+ + ++  +     +    +F LL+   +  
Sbjct: 60  W-------RKAINLRALGYYCLPGVPASVIGASLLWVMPVRLSSLCIGLFFLLL---IPL 109

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
           R   +      +N    + G V GFL+G +    G  T  L   YG       AT +  S
Sbjct: 110 RHLAHRRAFILNNSQLAMAGGVVGFLTGVV-FSTGPLTIPLFAGYGLLKGALLATESAAS 168

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            +I             G+ G  PWS+    + A +++    +    +  +    +     
Sbjct: 169 LVIYLTKAATF-----GVIGALPWSV----LLAGVLVGLTQVAGVYIGKRFVLRLSDTLF 219

Query: 264 TIGFSMIMFTTSF 276
                 +M     
Sbjct: 220 NRLVDSMMLIAGL 232


>gi|153003636|ref|YP_001377961.1| hypothetical protein Anae109_0765 [Anaeromyxobacter sp. Fw109-5]
 gi|152027209|gb|ABS24977.1| protein of unknown function DUF81 [Anaeromyxobacter sp. Fw109-5]
          Length = 255

 Score = 40.1 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 37/84 (44%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
           S     A+GTSL V+A  S M+     R    + ++   +       +     + + +D+
Sbjct: 171 SFPPRQAVGTSLVVVALASAMALAASARGAPADWEVAIPFALAGVAGSGAGRRLAARLDE 230

Query: 124 SFLNKAFAIFCLLMGILMLKRDRL 147
           + L +AFA+  +++   +  R+  
Sbjct: 231 ALLRRAFALVLVILSAFLFARNLP 254



 Score = 35.8 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 78/244 (31%), Gaps = 29/244 (11%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP+L              +  A  TSL V+   +      H R GT+ +        
Sbjct: 26  VLTVPILVYVL-------GEDVSTAATTSLLVVGLAAASGAASHWRAGTVRLPTALALSG 78

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY--------CERKFPDNY 157
           V    ++  SL+   +       AFA   LL   L+ +                      
Sbjct: 79  VASAGSIAGSLLRERLGGRGFLIAFAGLLLLAAALVWRPADRARGEPRECVLRPDVRSCA 138

Query: 158 VKYIWGMVTGF-LSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
                GM  GF        GG +   +L+L       +A  TS  V AL +  AL     
Sbjct: 139 KLGAAGMGVGFLTGLFGVGGGFVIVTVLLLVLSFPPRQAVGTSLVVVALASAMALAA--- 195

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS- 275
                 G P       +    +      +  +    +L+  + +  L   F++++   S 
Sbjct: 196 ---SARGAPA------DWEVAIPFALAGVAGSGAGRRLAARLDEALLRRAFALVLVILSA 246

Query: 276 FVFA 279
           F+FA
Sbjct: 247 FLFA 250


>gi|91214996|ref|ZP_01251968.1| hypothetical protein P700755_11902 [Psychroflexus torquis ATCC
           700755]
 gi|91186601|gb|EAS72972.1| hypothetical protein P700755_11902 [Psychroflexus torquis ATCC
           700755]
          Length = 238

 Score = 40.1 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 56/156 (35%), Gaps = 16/156 (10%)

Query: 23  ICLIIVASFLSGT-LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           + LI+      G  +  + G  G L+ +P+L    QL               +   I   
Sbjct: 5   VLLILTVGVFIGFYVQTVIGFAGSLIALPILLLGMQLQD-----------AIAYISIFYL 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              +F+  +    I+ KI+        I  ++   ++++     L K   +F LL    +
Sbjct: 54  FSSAFLITKEWKNIDKKIIFKLAITSVIGVILGITLLTYSKPIVLKKGLGVFILLYVAYV 113

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
           L   +    +   +      +G++ GF SG    GG
Sbjct: 114 LYGKK----KIKLNKGGVISFGVIAGFFSGLFSTGG 145


>gi|327309894|ref|YP_004336792.1| hypothetical protein Psed_6854 [Pseudonocardia dioxanivorans
           CB1190]
 gi|326955229|gb|AEA28925.1| protein of unknown function DUF81 [Pseudonocardia dioxanivorans
           CB1190]
          Length = 264

 Score = 40.1 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 79/239 (33%), Gaps = 34/239 (14%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP L              +  A+  SL V+A ++        R G I   +   +  
Sbjct: 24  ILAVPALVY-------GVGQPVGAAVFGSLLVVAVSAAGGLAVRLRSGVIRWPVAMVFGA 76

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE-------------RK 152
               T    + +   V   +L  AF++  L + I ML+                    R 
Sbjct: 77  AGVPTAFAGAALGRLVADRWLLVAFSVLMLAVAIAMLRGSPEEATGGACRVRDGRVDWRS 136

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
                +    G+        +G G  +    L L  G S  +A ATS  +  + +   L 
Sbjct: 137 CLPKALTAGAGVGVLTGLFGVGGG-FVIVPALTLLLGLSAAEAIATSLVIVTITSLAGLS 195

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT-KLSYMIGKKYLTIGFSMI 270
               +  G++             AV+ +   + L+  LA  +++  +    L  GF+ +
Sbjct: 196 AHAAAAGGVD------------YAVIGVFAGTALLASLAAGRVADRLPAAALRRGFAYL 242


>gi|217971277|ref|YP_002356028.1| hypothetical protein Sbal223_0061 [Shewanella baltica OS223]
 gi|217496412|gb|ACK44605.1| protein of unknown function DUF81 [Shewanella baltica OS223]
          Length = 245

 Score = 40.1 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 23/256 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  + I A  ++G     F  G G + VP+L      + I  +    + +   L  +   
Sbjct: 7   FWLVAIPAVLITGISKSGFAGGVGGLTVPLL-----ALAISPTTAAALMLP-LLIYMDFL 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           S  S+         N + L   +    +   +  L+   +++ +L        L  G+  
Sbjct: 61  SARSWWGQH-----NPRHLWILLPAAIVGIFIAYLLFDRLNEEYLRAILGCVSLGFGLYG 115

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L        +  P   V  + G+  GF S  +   GG   N  +L    +  +  AT+  
Sbjct: 116 LILGDKT--QASPSPLVGRLCGLTAGFTS-FVAHAGGPPLNAYLLPLRLAKAEFLATAVV 172

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             A++    L+     G              NI   L+++P++ L   L   +   I  +
Sbjct: 173 FFAVVNLVKLIPYSLLGQINQE---------NILVSLLLVPLAWLGVKLGLFIQDKINDR 223

Query: 262 YLTIGFSMIMFTTSFV 277
                  ++M      
Sbjct: 224 LFKRIILILMVLVGVR 239


>gi|291295242|ref|YP_003506640.1| hypothetical protein Mrub_0855 [Meiothermus ruber DSM 1279]
 gi|290470201|gb|ADD27620.1| protein of unknown function DUF81 [Meiothermus ruber DSM 1279]
          Length = 249

 Score = 40.1 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 67/225 (29%), Gaps = 19/225 (8%)

Query: 54  KAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV 113
                +G+       VA+GT+L       + +   + +   +N + L+  +       V 
Sbjct: 28  LLILALGVPPE----VAVGTALLFSMLAKIPAGWVYWQKQGVNWQALRLLLAGGIPAAVA 83

Query: 114 TSLMISH--VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSG 171
            SL++    V K  +     +  L + ++ L         +        +     G   G
Sbjct: 84  GSLLLHSFKVHKEAVLAGIGLIILSVAVINLAITLRKLSPRPLAPQWIVVVAAFIGLEVG 143

Query: 172 ALGVGGGIFTN-LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLG 230
               G G     LLM     +  +   T       ++             L G    +LG
Sbjct: 144 FSSAGAGALGTLLLMSGTRLAPREIVGTDLWFGLGLS------------ALAGGLHAALG 191

Query: 231 FVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             +   +  +     + + L   L   + ++   IG  + +    
Sbjct: 192 QTDWLLLTKLACGGWIGSLLGAWLGQRVNQRPFRIGLLLWLMLIG 236


>gi|225573990|ref|ZP_03782635.1| hypothetical protein RUMHYD_02086 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038769|gb|EEG49015.1| hypothetical protein RUMHYD_02086 [Blautia hydrogenotrophica DSM
           10507]
          Length = 253

 Score = 40.1 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 55/164 (33%), Gaps = 6/164 (3%)

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
           I   + +H+++GT+       +  S     R+  ++ KI+   I    I + + + +   
Sbjct: 37  ILAGVPVHMSIGTNKLSSMTGTCFSTFRLCRNRFMDGKIVLPTIVASLIGSSIGAHLALM 96

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGV 175
           VD+  +         +    +LK   +  + K          +  +   V G   G  G 
Sbjct: 97  VDERVMKIVLLCVLPVAAFYVLKNKEMGQDGKQEVQGVLRYVIVTVAAFVIGGYDGFYGP 156

Query: 176 GGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           G G F  L+        +  A      V+      A +    +G
Sbjct: 157 GTGTFLLLVYTGLARMDVRTAAGNVKLVNLASNVSAFVTFFMNG 200


>gi|325289076|ref|YP_004265257.1| protein of unknown function DUF81 [Syntrophobotulus glycolicus DSM
           8271]
 gi|324964477|gb|ADY55256.1| protein of unknown function DUF81 [Syntrophobotulus glycolicus DSM
           8271]
          Length = 256

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 86/242 (35%), Gaps = 18/242 (7%)

Query: 8   FSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
             L+      C++  +   +V    +G    L      ++++P+L+  F           
Sbjct: 9   LQLLNLTQMQCIIVMVTAFLVGFSKTGISGVL------MLVIPMLASVFGGRD------- 55

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
             + G  L ++    V +   +RR  ++N K +   +    I  V+ +++   +      
Sbjct: 56  --STGILLPMLLVGDVFAVWSYRR--SVNWKKVIAPLPWALIGMVIGAVVGKVISDQIFV 111

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
               I  L    ++L  +++    + P     YI   +    +  +G   G   ++ +L 
Sbjct: 112 ILIGIIVLFCLGILLYTEKMGKNFEVPTQTWFYITAGILSGFATMIGNAAGPIFSVYLLA 171

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
            G        T+A    +I    + V+I++ W   G+    L  V +  + +   +   I
Sbjct: 172 LGLQKNHFMGTNAWFFFIINSIKVPVQIFA-WHNMGMQLLILTAVVLPVIALGAVLGFFI 230

Query: 248 TP 249
             
Sbjct: 231 VK 232


>gi|307068415|ref|YP_003877381.1| hypothetical protein SPAP_1796 [Streptococcus pneumoniae AP200]
 gi|306409952|gb|ADM85379.1| hypothetical protein SPAP_1796 [Streptococcus pneumoniae AP200]
          Length = 142

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 12/117 (10%)

Query: 160 YIWGMVTGFLSGALGVGGGIFTN-LLMLFYGASIYKATATSAGVSALIAFPA-LLVRIYS 217
            I G++ G +S  LG+GGG     LLM+F+  SI +AT  S  +           + + +
Sbjct: 24  MICGLLLGLISSFLGIGGGPLNVSLLMVFFSISIKEATMYSLAIIFFSQLSHLATIVVVT 83

Query: 218 GWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
           G     L P          V +I   SI    L T +S ++ + ++   F  ++F  
Sbjct: 84  GLNQYHLAP----------VPVIFLASICGGVLGTVVSKVLPENWVRYCFKGMLFFV 130


>gi|326797060|ref|YP_004314880.1| hypothetical protein Marme_3834 [Marinomonas mediterranea MMB-1]
 gi|326547824|gb|ADZ93044.1| protein of unknown function DUF81 [Marinomonas mediterranea MMB-1]
          Length = 241

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 62/156 (39%), Gaps = 15/156 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGG-GLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           + ++++A  ++G     F VGG G++++P++  AF             A+   L +   T
Sbjct: 5   VTILLIAGLITGF--SKFSVGGMGMLVLPIIMIAFPG---------PEALAVMLPLYVIT 53

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            +M+   +R H  I   +L   + +  +  ++ + ++S +D +       +  L M  L 
Sbjct: 54  DIMAIYSYREH--IKWSVLLRLMPLAFLGVLIGASVLSSIDATQFMTILGVMILAMMALG 111

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
           +    +            YI G   G +S      G
Sbjct: 112 VY-LDMKPATFMQSPLAAYIMGFFGGTVSMLANAAG 146


>gi|322370557|ref|ZP_08045115.1| hypothetical protein ZOD2009_13741 [Haladaptatus paucihalophilus
           DX253]
 gi|320549974|gb|EFW91630.1| hypothetical protein ZOD2009_13741 [Haladaptatus paucihalophilus
           DX253]
          Length = 323

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 91/291 (31%), Gaps = 57/291 (19%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            I L I    + G L G FG+GG  ++ P L                VA+G+ L  +  T
Sbjct: 5   LIALFIGFGLVIGILFGFFGMGGSFLVTPALLVF--------GYPAKVAVGSGLAFVFGT 56

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS-----FLNKAFAIFCLL 136
           SV++ + HR  G ++ K+   +I  +     V   ++  ++ +      +  A+ +    
Sbjct: 57  SVIAALRHRNLGQVDYKLALMFIVGMTSGIKVGEYVVLWLEATGMADIVVGTAYVLLLAT 116

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF--------- 187
           +G+   +  R   +        ++    +   +S    + GG+  ++ +           
Sbjct: 117 VGLFTFRDSRGSDDDGASSLPERFEVLQIPPMVS----ISGGVEISVWLTLGIALFVGIL 172

Query: 188 -------------------YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWS 228
                               G     A  T      +           +           
Sbjct: 173 SGFLGVGGGFLLMPAMVYVLGVPTVVAVGTDVLQITVSGGFGAFSYAQN----------- 221

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
            G V +  V  +L  S L   +    + +  +  +   F+ ++   S   A
Sbjct: 222 -GAVELAVVAPLLAGSALGARIGAAATNLTDEDDIKGYFAAMLLAGSVAVA 271


>gi|257455314|ref|ZP_05620549.1| hypothetical protein ENHAE0001_0178 [Enhydrobacter aerosaccus SK60]
 gi|257447276|gb|EEV22284.1| hypothetical protein ENHAE0001_0178 [Enhydrobacter aerosaccus SK60]
          Length = 242

 Score = 39.7 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 31/254 (12%), Positives = 84/254 (33%), Gaps = 29/254 (11%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+ +A+ L+  L+ + GVGGG++++ ++        I     +   +             
Sbjct: 6   LLALANLLTSALTAITGVGGGMILIGLMPFFVPAAAIVPVHGVTQLVS-----------N 54

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-MLK 143
           +         ++      ++       +V  +++  +    +     I+ LL+       
Sbjct: 55  ATRAWFGRDALDFTYFWQFLAGSLTGLLVFGVLVRFIHLELIPLFIGIYILLITWSSTFN 114

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
           R     E  F   + +   G+  G          G     ++  Y         T A + 
Sbjct: 115 RVIRRFESFFLVGFAQTGLGVFVGTP--------GPLNIAMLNKYYDDNNVVVTTGALMM 166

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            ++    L+V +  G+                 +++++ ++ + + L T+L + I   +L
Sbjct: 167 TVVHTAKLIVYVAMGFVFAD---------YWQLLVMMVIMATVGSWLGTRLRHKIRLDWL 217

Query: 264 TIGFSMIMFTTSFV 277
                 ++   +  
Sbjct: 218 EKILPYLLTLIALK 231


>gi|315927416|gb|EFV06754.1| inner membrane protein YfcA [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 176

 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 59/181 (32%), Gaps = 17/181 (9%)

Query: 104 IFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD----NYVK 159
            F   +   + S  +  V    L     IF  L  +    R  L      P         
Sbjct: 3   CFFTALGAAIGSYSVLFVKDEQLKLIILIFLTLTFLYTALRPNLGKHESEPKIKNIKIFH 62

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            I G+  GF  G LG G G F     +   G ++ KA   S     L     ++      
Sbjct: 63  LICGLTLGFYDGFLGPGTGSFWIFACVMLLGFNMRKA---SINTKILNFTSNIIALAIFL 119

Query: 219 WGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           W    L  W++G       L++    +L   L +KL      K++   F +++  T    
Sbjct: 120 WQYELL--WAVG-------LLMGVGQVLGAYLGSKLVLKTNGKFIKTLFLIVVGATIIKV 170

Query: 279 A 279
           A
Sbjct: 171 A 171


>gi|167037420|ref|YP_001664998.1| hypothetical protein Teth39_1007 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167040087|ref|YP_001663072.1| hypothetical protein Teth514_1447 [Thermoanaerobacter sp. X514]
 gi|256752596|ref|ZP_05493450.1| conserved hypothetical protein [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300914170|ref|ZP_07131486.1| protein of unknown function DUF81 [Thermoanaerobacter sp. X561]
 gi|307724594|ref|YP_003904345.1| hypothetical protein Thet_1455 [Thermoanaerobacter sp. X513]
 gi|320115833|ref|YP_004185992.1| hypothetical protein Thebr_1033 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|166854327|gb|ABY92736.1| hypothetical protein Teth514_1447 [Thermoanaerobacter sp. X514]
 gi|166856254|gb|ABY94662.1| hypothetical protein Teth39_1007 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256748534|gb|EEU61584.1| conserved hypothetical protein [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300889105|gb|EFK84251.1| protein of unknown function DUF81 [Thermoanaerobacter sp. X561]
 gi|307581655|gb|ADN55054.1| protein of unknown function DUF81 [Thermoanaerobacter sp. X513]
 gi|319928924|gb|ADV79609.1| protein of unknown function DUF81 [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 118

 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 55/119 (46%), Gaps = 7/119 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +    F++G ++GL G GGG ++VP L            I  H A  T++ +I P +++S
Sbjct: 7   LFSIGFITGIVNGLLGTGGGTLIVPALVFLL-------GIEDHKAHATAISIILPITLVS 59

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            + + ++  I++ +  +      I  ++ +  ++ +    L K F I  L+  + M   
Sbjct: 60  SLVYLQNKIIDIPLTINIAIGSTIGGIIGAYFLNKLSIPLLRKIFGIIMLIASVRMWIS 118


>gi|118592019|ref|ZP_01549413.1| hypothetical protein SIAM614_25122 [Stappia aggregata IAM 12614]
 gi|118435315|gb|EAV41962.1| hypothetical protein SIAM614_25122 [Stappia aggregata IAM 12614]
          Length = 256

 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 84/268 (31%), Gaps = 35/268 (13%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
           F      +     +IV SF +  L+   G+GGG+ ++ +++       +           
Sbjct: 8   FFPDQLHLAASLTLIVTSFFTSALTAAVGLGGGVALIAIMATVMPASALVPIHG------ 61

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
                +      +     +   ++  I   +     +   V   +   +  + L     +
Sbjct: 62  -----VVQLGSNAGRALVQLKHVDWLIALWFAIGAALGAAVGGAIAVELPPAVLKAGIGL 116

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALG----VGGGIFTNLLMLFY 188
           F L +      R     +R      V    G  + FLS   G    +GG + + L +  +
Sbjct: 117 FVLWVVWGKAPRFGKAPKR------VMAAAGFASTFLSMFFGAAGPIGGAVLSTLGLPRH 170

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
           G    +A          I     L   ++ W               G +++++    L T
Sbjct: 171 GFVANQAVTALIMHVFKIVAFGALGFAFAPW--------------FGLIILMIASGFLGT 216

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSF 276
              ++L   + +K    GF  +M   + 
Sbjct: 217 LAGSRLLGRMNEKSFKTGFRWVMTALAL 244


>gi|167037325|ref|YP_001664903.1| hypothetical protein Teth39_0912 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115741|ref|YP_004185900.1| hypothetical protein Thebr_0937 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|166856159|gb|ABY94567.1| protein of unknown function DUF81 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319928832|gb|ADV79517.1| protein of unknown function DUF81 [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 251

 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 86/263 (32%), Gaps = 29/263 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            LI++AS L+G  + + G GG L+  P L            I    A  T+   +   SV
Sbjct: 5   ILILMASILAGATNSIAG-GGTLITFPALVWV--------GINPLAANMTNTVALWTGSV 55

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                 +   +   ++LK       +  ++ + ++        N       L   +++  
Sbjct: 56  TGAWGFKERLSQTKELLKFLTLPSLLGGILGAYLLMITPHKVFNFVVPFLVLFATVILAL 115

Query: 144 RDRLY-------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA-SIYKA 195
            DR+          R+       +I   +T    G    G GI     +   G   I+ A
Sbjct: 116 NDRINKFNLDSEEGREKKSLVFVFILQFLTSLYGGYFAAGIGILMLATLGIAGITDIHTA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
                 +S  I   + LV ++SG             V     +I++    L   L  K+S
Sbjct: 176 NGIKNVLSLFINITSGLVLLFSGK------------VVWPFAIILMIGFALGGYLGAKIS 223

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
                K +     +     + VF
Sbjct: 224 QKFDSKKVKSFVILWGIILAIVF 246


>gi|330837695|ref|YP_004412336.1| hypothetical protein Spico_1756 [Spirochaeta coccoides DSM 17374]
 gi|329749598|gb|AEC02954.1| protein of unknown function DUF81 [Spirochaeta coccoides DSM 17374]
          Length = 282

 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 64/208 (30%), Gaps = 18/208 (8%)

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS--------FLN 127
            V+A TSV           +N KI         +  ++    +  + ++        F  
Sbjct: 68  TVLAMTSVALLTRKDGEVRVNGKIGTLLAIGSVLGGIIGKEALFFIRQAAGNDELVGFTQ 127

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
               +    M  L   R             +    G+  G  S  LG+GGG    +++ +
Sbjct: 128 NIILVILTAMVFLYTVRKNKIETLHVVHPVLCLSSGLFLGLCSSFLGIGGGPVNIMILSY 187

Query: 188 -YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
            +      A   S  +       +L + I +   +   P           +++++   I 
Sbjct: 188 LFSMDSKHAALNSLFIIFFSQLASLAMTILTN-SVPDFP--------WLLLILMIASGIC 238

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTT 274
              L  K+S  +   ++   F  +M   
Sbjct: 239 GALLGRKVSLKLSHAHVDRLFMAVMVVI 266



 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 10/124 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L + +    G  S   G+GGG V + +LS  F +         H A+  SL +I  + +
Sbjct: 157 VLCLSSGLFLGLCSSFLGIGGGPVNIMILSYLFSM------DSKHAALN-SLFIIFFSQL 209

Query: 84  MSFMEHRRHGTI---NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            S        ++      +L   I       ++   +   +  + +++ F    +++  L
Sbjct: 210 ASLAMTILTNSVPDFPWLLLILMIASGICGALLGRKVSLKLSHAHVDRLFMAVMVVIIGL 269

Query: 141 MLKR 144
            L  
Sbjct: 270 SLYN 273


>gi|294948278|ref|XP_002785683.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|294954883|ref|XP_002788342.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239899706|gb|EER17479.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239903654|gb|EER20138.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 354

 Score = 39.7 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 44/129 (34%)

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
            S +   +A+  +   +      +           V     +V G LS  +G  G +F  
Sbjct: 181 TSIVALIWAVCLIFPPLKGNSATQKRSPGAVKIGLVLMTSTIVIGLLSSIIGTAGALFII 240

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            ++L  G    +ATAT+  V    +    L     G+       W +     GA+L    
Sbjct: 241 RVVLSLGLDPKQATATATVVIFATSSRTALSFALGGYFPPASNLWIVVLPFAGALLGKTI 300

Query: 243 ISILITPLA 251
           ++ LI    
Sbjct: 301 VAKLIAKTG 309


>gi|255021082|ref|ZP_05293135.1| putative membrane protein [Acidithiobacillus caldus ATCC 51756]
 gi|254969496|gb|EET27005.1| putative membrane protein [Acidithiobacillus caldus ATCC 51756]
          Length = 253

 Score = 39.7 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 60/185 (32%), Gaps = 14/185 (7%)

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL-LMGILMLKRDRLYCERKF 153
           I    L+  +    +     + +++  D   L +   +F L  +   ++ +         
Sbjct: 80  IRWPELRWLVPGSLLGLAAGAFILADTDAQSLTRFLGLFILAYVVYALVLKPEKLPRLSL 139

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
           P      I+G V G L G    GGG      +           AT  G++       L +
Sbjct: 140 PWGLPLGIFGGVIGSLYG----GGGPPIVAYLQMRHLDKRAFRATFQGIALADNIVRLFL 195

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            I  G  L  LP          + + ++P  +L      +L + I ++   +    ++  
Sbjct: 196 YI--GLSLLTLPLA-------ISFVFLVPPVLLGLWAGNRLHFRIPQRAFLLSTLALLTI 246

Query: 274 TSFVF 278
               +
Sbjct: 247 VGIQY 251


>gi|227502313|ref|ZP_03932362.1| membrane protein [Corynebacterium accolens ATCC 49725]
 gi|227076955|gb|EEI14918.1| membrane protein [Corynebacterium accolens ATCC 49725]
          Length = 256

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 91/262 (34%), Gaps = 25/262 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++V +  +G +  + G GGGLV++P+L            +    A+ T+       + 
Sbjct: 9   AVLLVGAAGAGWIDAVIG-GGGLVLIPLLLAVV------PGLAPATALTTNKLAAVSGTA 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + +   R        L  +  +  +   + + + ++++   +     +  +++G+ +  
Sbjct: 62  SAAVTLVRRVRPPAGELVRYALIALVCAGLGASVAANLNSDIMRPLIIVLLVVVGVFVTF 121

Query: 144 RDRLYCERKFPDNYVKYIWGMV-----TGFLSGALGVGGGIFTNLLMLF-YGASIYKATA 197
           +                 W  +       F  G  G G G+F  +   F +  +  K+ A
Sbjct: 122 KPSFGTTESPGIRGGWRTWAGLVAVAAISFYDGIFGPGTGMFLIMAFTFIFSQNFLKSAA 181

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  V+      AL+  I  G        W+LG       + +   +IL   +  +    
Sbjct: 182 MAKVVNTATNLGALVTFILGG-----HVWWTLG-------IALAAANILGAQVGARTVLS 229

Query: 258 IGKKYLTIGFSMIMFTTSFVFA 279
            G K +      ++   S   +
Sbjct: 230 GGTKLIRYALLTLVVVMSSYLS 251


>gi|284162898|ref|YP_003401521.1| hypothetical protein Arcpr_1804 [Archaeoglobus profundus DSM 5631]
 gi|284012895|gb|ADB58848.1| protein of unknown function DUF81 [Archaeoglobus profundus DSM
           5631]
          Length = 321

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 7/128 (5%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  V    L  +     G +SGLFG+G G  MVPVL+             + VA   S  
Sbjct: 193 DYKVTRAWLGALCFCGIGLVSGLFGLGAGWAMVPVLNLIMLA-------PLKVAAACSKV 245

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           +I      +   +   G I        +  L + T++ + ++  V   F+        LL
Sbjct: 246 LIGIGDTAAVWPYITAGGIIPIFTIPCLIGLILGTIIGAKIMLKVKAGFVRWLIIAIMLL 305

Query: 137 MGILMLKR 144
            G+ ++ +
Sbjct: 306 SGVRLIWK 313


>gi|218512331|ref|ZP_03509171.1| hypothetical protein Retl8_00899 [Rhizobium etli 8C-3]
          Length = 94

 Score = 39.7 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 7/87 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +  L  ++    G L G+ GVGGG +M P+L   F        +    A+GT L   A
Sbjct: 1   MTFEPLYSISGLFVGALVGITGVGGGSLMTPLLVLLF-------GVHPATAVGTDLLYAA 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFV 106
            T       H  HG IN KI+      
Sbjct: 54  ITKTAGTAVHGVHGRINWKIVGGLAAG 80


>gi|254447713|ref|ZP_05061179.1| adenylosuccinate synthetase [gamma proteobacterium HTCC5015]
 gi|198263056|gb|EDY87335.1| adenylosuccinate synthetase [gamma proteobacterium HTCC5015]
          Length = 254

 Score = 39.7 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 73/214 (34%), Gaps = 17/214 (7%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
            A+ T         V +   H R G   +      +       ++ + +I    + +   
Sbjct: 41  TALATHKVASVALGVGATTRHWREGRFELGFSAFILLCGVPGVLLGANVILQFPERWAEL 100

Query: 129 AFAIFCLLMGILMLKRDRL-YCERKFPDNYVKYIWGMV----TGFLSGALGVGGGIFTNL 183
              +    +G+    +  L         N + Y WG +     GFL+G+L  G G+F  L
Sbjct: 101 CLGLLTASLGLYSAFKRDLGQSALPKRRNTLGYAWGGLGIFAIGFLNGSLTSGTGLFLTL 160

Query: 184 LM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            + L++G    +A A +  +         +  +++G G   L     G +    +  ++ 
Sbjct: 161 WLILWFGFDYQRAVAYTLVL---------VGLVWNGSGAIAL--GVQGTIEWSWLPALIA 209

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            S++       LS   G   +   F +I      
Sbjct: 210 GSLIGGYAGAHLSIAKGNPLIKRCFEVITLLVGL 243


>gi|319897057|ref|YP_004135252.1| uncharacterised protein [Haemophilus influenzae F3031]
 gi|317432561|emb|CBY80921.1| putative uncharacterised protein [Haemophilus influenzae F3031]
          Length = 190

 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 6/134 (4%)

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN-KAFAIFCLLMGILMLKRDRLYC 149
           +  +I  KI+   I    +   + + +I  +    +N   FA   L +   + K   L  
Sbjct: 2   QSKSIVWKIIPIGIVSALLGAYIGAEVILMLPTHVINYIIFAFLPLGLATTLFKGKLLKQ 61

Query: 150 ERK----FPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSA 204
           E +           +I  ++ GF  G  G G G IF   L L    S+ +A+ATS   + 
Sbjct: 62  ENQEQEIKNSALSVFITCLIVGFYDGFFGPGTGSIFIIALFLINKLSLLRASATSKIFNF 121

Query: 205 LIAFPALLVRIYSG 218
                A +    +G
Sbjct: 122 SSNIGAFVSFAIAG 135


>gi|163783882|ref|ZP_02178858.1| hypothetical protein HG1285_05290 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880845|gb|EDP74373.1| hypothetical protein HG1285_05290 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 247

 Score = 39.7 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 52/160 (32%), Gaps = 12/160 (7%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F+   + G  G+G G+++  +L     +  +            SL +     V   +   
Sbjct: 12  FIGWFVQGFLGIGSGIIIPAILLFFINIKTVIV----------SLTITNMFGVSYIIYKN 61

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           R    ++K +        I   + S ++   D   +   F     + G+  L        
Sbjct: 62  RLKKFSLKRIYLITAASIIGVFIGSYLLGISDTQHIKLVFGTVVAITGVYDLLVQTGNLG 121

Query: 151 --RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
             +       ++I G+  G  SG +G  G I+       +
Sbjct: 122 NFKIKRTKLNEFITGITGGIFSGLVGGAGSIYALYFNQLF 161


>gi|74318398|ref|YP_316138.1| hypothetical protein Tbd_2380 [Thiobacillus denitrificans ATCC
           25259]
 gi|74057893|gb|AAZ98333.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 240

 Score = 39.7 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 62/188 (32%), Gaps = 21/188 (11%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT 94
            + G+ G G GL+ VP+L+    L  +             L ++   +    +       
Sbjct: 13  FIRGITGFGSGLIAVPLLALFMPLQFVVP-----------LVLLLDFTASLVLGGVHFKR 61

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
           +    +   I    +     + ++ ++ ++ +    A+F L+ G+  L         K  
Sbjct: 62  VRWDEIGILIPFSVVGVAFGTGLLVNLPQAPMLIGLALFVLVFGLRSLLNLH---GDKPV 118

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY---KATATSAGVSALIAFPAL 211
                    +  G + G  G GG       +++    I    ++ AT + +  +     +
Sbjct: 119 SRLWAIPASLTGGTVGGLFGTGG----PPYVIYLAHRIRDKGESRATLSALFFIEGLTRI 174

Query: 212 LVRIYSGW 219
              +  G 
Sbjct: 175 GSFLIVGL 182


>gi|149176798|ref|ZP_01855409.1| hypothetical protein PM8797T_15126 [Planctomyces maris DSM 8797]
 gi|148844439|gb|EDL58791.1| hypothetical protein PM8797T_15126 [Planctomyces maris DSM 8797]
          Length = 267

 Score = 39.7 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 53/125 (42%), Gaps = 9/125 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  L+     ++G L+ L G GG L+++P++            I   V  GT    I   
Sbjct: 5   HYLLLAGVGCIAGILNVLAG-GGSLILMPIMVFL--------DIPGAVTNGTVRIAILGQ 55

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ +    ++ G  + ++           TV+ + + + +  ++ N+  AI  L + + M
Sbjct: 56  NLTAVAGFKQKGFSDYRLSLTLALCALPGTVIGAFLGTKLSNAWFNRVLAIIMLGVLVTM 115

Query: 142 LKRDR 146
           +  +R
Sbjct: 116 ILGNR 120


>gi|70729931|ref|YP_259670.1| hypothetical protein PFL_2563 [Pseudomonas fluorescens Pf-5]
 gi|68344230|gb|AAY91836.1| membrane protein, putative [Pseudomonas fluorescens Pf-5]
          Length = 275

 Score = 39.7 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           + TSL VIA  S+ S +     G ++  +   +     +  V+   + SH+    L + F
Sbjct: 195 VATSLAVIALVSLGSVVTASLSGIMHWAVGAPFALGAVLGLVLGRQVASHLAGPRLQQLF 254

Query: 131 AI 132
           AI
Sbjct: 255 AI 256


>gi|332974250|gb|EGK11182.1| hypothetical protein HMPREF9374_2000 [Desmospora sp. 8437]
          Length = 141

 Score = 39.7 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 41/113 (36%), Gaps = 8/113 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++    F++  + G  G+  G+      +      GI  +    VA  +      
Sbjct: 1   MQRLIVLAFIGFVAQLIDGALGMAYGV----SSTSFLLAYGIAPA----VASASVHMAEL 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
            T+  S + H + G ++  ++K  +    I   + +  +S +    +    A 
Sbjct: 53  VTTAASGLSHWKFGNVDKSVVKKLMIPGSIGAFLGACFLSSLPGESVKPFIAA 105


>gi|259502314|ref|ZP_05745216.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
 gi|259169694|gb|EEW54189.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
          Length = 261

 Score = 39.7 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 83/238 (34%), Gaps = 24/238 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    ++++   L+G +S   G+   L+  P L     +MG+       +A  TS     
Sbjct: 4   ITLFIILVIVGLLAGIVSAAAGL-ASLISYPALL----MMGLPPV----MANVTSAWSTV 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            ++  S     +    + + +   + ++ +  V+ ++++  +   F  +       + G+
Sbjct: 55  GSAYSSIAASTKELRHDKRQMWLIVPLVFVGAVLGAILLFTLPGKFFQELVPFCIGIAGL 114

Query: 140 LMLKRDRLY------------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
           +++   R                R   D  +  +   + G  +G    G GI    L+  
Sbjct: 115 ILIFPHRPRQAQAAMAANSHSLGRHRLDTLLTALGVFLVGIYAGYFNAGAGIMMLTLLAV 174

Query: 188 YGASIYKATATS---AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
                  A   +     ++       ++  + +    N + P  +G V  GA+  ++ 
Sbjct: 175 VNRQKTFAVNNALKNVAMTVTNTIAVIIFAVETTIEWNFVIPLFIGNVIGGALGPVIV 232


>gi|254785144|ref|YP_003072572.1| hypothetical protein TERTU_0974 [Teredinibacter turnerae T7901]
 gi|237683495|gb|ACR10759.1| conserved hypothetical protein [Teredinibacter turnerae T7901]
          Length = 255

 Score = 39.7 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 69/214 (32%), Gaps = 17/214 (7%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
            A+ T           + ++H R G          +       ++ + +I  + +S    
Sbjct: 45  TALATHKIATVALGAGATLKHWRQGNTQWFFAILMLISGLPGVILGARVIIEIPESIAKF 104

Query: 129 AFAIFCLLMGILMLKRDRL-----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
           +  +  + + +  L + +L        R     ++        G L+G+L  G G+F  L
Sbjct: 105 SLGVLTIGLSVYSLYKPQLGQDHTPINRNARGYFIGAAMLFTLGVLNGSLTSGTGLFVTL 164

Query: 184 LM-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
            + L++G    +A A +  +         +   ++G G   L   +   V    +  +L 
Sbjct: 165 WLILWFGFDYQRAVAYTMIL---------VGLFWNGTGALTLALLTP--VKWEWLPALLT 213

Query: 243 ISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
            S L        +   G   +   F  +      
Sbjct: 214 GSALGGYCGAHFAVKYGNPVIKRIFEGVTMLVGL 247


>gi|71033393|ref|XP_766338.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68353295|gb|EAN34055.1| hypothetical protein TP01_0817 [Theileria parva]
          Length = 409

 Score = 39.7 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 29/60 (48%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
            +  +    +GF+SGA+G+G GIF   L+ +        +ATS  ++  ++   L    +
Sbjct: 292 LLNTMVAFFSGFMSGAIGIGSGIFLVPLLQYLNVPPLSCSATSNLLTMSMSIATLSRFSF 351



 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 41/99 (41%), Gaps = 12/99 (12%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L  + +F SG +SG  G+G G+ +VP+L    Q + +         +  S     
Sbjct: 288 IHIILLNTMVAFFSGFMSGAIGIGSGIFLVPLL----QYLNVPP-------LSCSATSNL 336

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI 118
            T  MS     R  +  + + ++ +      +++ + + 
Sbjct: 337 LTMSMSIATLSRF-SFKIDLSREMVIPPVCGSLLGTSLS 374


>gi|254380875|ref|ZP_04996241.1| hypothetical protein SSAG_00543 [Streptomyces sp. Mg1]
 gi|194339786|gb|EDX20752.1| hypothetical protein SSAG_00543 [Streptomyces sp. Mg1]
          Length = 248

 Score = 39.7 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 54/260 (20%), Positives = 93/260 (35%), Gaps = 19/260 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + L + A  + G   G  G GG ++ VP L                 A   SL ++ 
Sbjct: 1   MSTLILALAAGAVIGLALGALGGGGSVLAVPALIYLLGF-------TPAAATTASLIIVT 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            TS  +   H   G +  K    +  V     +  + + S V ++ L  AFA   LL  +
Sbjct: 54  ATSATALYAHATSGNVRWKTGALFAAVGIPPAIAAAALASRVPEALLTAAFAAIALLAAL 113

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATAT 198
            + K      + +          G+  G ++G LGVGGG      L+   G  +  A  T
Sbjct: 114 ALFKAPPPDRQPRAVRPARAAGAGVGLGAVTGFLGVGGGFLAVPALVSVLGLRMRAAVGT 173

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           S  V  + +  AL+ R  +G             +N   +      +IL      +L+  I
Sbjct: 174 SLLVITVNSLAALVAR--AGTHTP---------LNWAVIAPFAGAAILGAWDGKRLAARI 222

Query: 259 GKKYLTIGFSMIMFTTSFVF 278
               L   F+ ++   + + 
Sbjct: 223 SGPALQRAFASVLLAVAALM 242


>gi|302337266|ref|YP_003802472.1| protein of unknown function DUF81 [Spirochaeta smaragdinae DSM
           11293]
 gi|301634451|gb|ADK79878.1| protein of unknown function DUF81 [Spirochaeta smaragdinae DSM
           11293]
          Length = 248

 Score = 39.7 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 59/159 (37%), Gaps = 13/159 (8%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  V+    + +  F+   + GL G G  L+  P+LS       I             L 
Sbjct: 2   NSTVELYIFVFLIEFVCYFIKGLAGFGDPLISTPLLSMTMDNSVISP-----------LN 50

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           +   T V ++M  +     +++     I  +    +  ++++ +     L     I  + 
Sbjct: 51  LCLATPVNAYMSWQNRKAFSIRTSLFIILCILCGIIPGTMLLKYASSWLLKAFLGILVIG 110

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGV 175
           +GI M+ RDR       P+  +  I    +G  +G  G+
Sbjct: 111 IGIEMITRDRTKTMH--PNKVILGIVSFCSGITAGLYGI 147


>gi|269977815|ref|ZP_06184772.1| membrane permease protein [Mobiluncus mulieris 28-1]
 gi|269933985|gb|EEZ90562.1| membrane permease protein [Mobiluncus mulieris 28-1]
          Length = 306

 Score = 39.7 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 37/116 (31%), Gaps = 7/116 (6%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP L               H A   SL ++  T+++S +       +  K    +     
Sbjct: 30  VPALVYLL-------GQNPHAAGAGSLIIVGATALISLIPRTWEHRVRWKDGLIFGLCST 82

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM 164
           + T + S +   V    L   F +  +++G++ML +           +        
Sbjct: 83  LATFLGSRLSFWVSGWVLMLLFGVLLVMVGMVMLWKAWQSARTAQRGSSGNGAAAT 138


>gi|145636635|ref|ZP_01792302.1| hypothetical protein CGSHiHH_03503 [Haemophilus influenzae PittHH]
 gi|145270161|gb|EDK10097.1| hypothetical protein CGSHiHH_03503 [Haemophilus influenzae PittHH]
          Length = 93

 Score = 39.7 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 7/92 (7%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             I ++++    +  +S +FG+GGG++MVP+L   F        + + V   TSL ++  
Sbjct: 4   STIFILLICGICTNMVSAIFGIGGGVLMVPILRTLF------PELPIQVISATSLTIVMC 57

Query: 81  TSVMSFMEHRRHG-TINMKILKDWIFVLPITT 111
           T++++ +   +    I+   +  W   + I  
Sbjct: 58  TALINLLFFYKQKIKIDYINMILWSIAMVIGV 89


>gi|332704447|ref|ZP_08424535.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332554596|gb|EGJ51640.1| protein of unknown function DUF81 [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 245

 Score = 39.7 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 56/155 (36%), Gaps = 14/155 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  I  A+  +G   G  G G  LV +P+L       G+   +   V +G  + +     
Sbjct: 6   LVAITAAAGFAGFTQGFAGFGSTLVALPLL-------GMVLDVRTAVPVGCLMALAINVV 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++    R    +  + L   +        V + M+    +  L        LL+ +  L
Sbjct: 59  LVA----RLRSHVQRRPLGWLVAASLPGMAVGAWMVGIAPEGLLKGLLGASVLLVALHSL 114

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
           + D+    R         + G++ G L   +G+ G
Sbjct: 115 RPDQP---RAPFRKEWIAVAGLLAGCLGVCIGING 146


>gi|319776311|ref|YP_004138799.1| hypothetical protein HICON_17220 [Haemophilus influenzae F3047]
 gi|317450902|emb|CBY87128.1| Putative uncharacterised protein [Haemophilus influenzae F3047]
          Length = 190

 Score = 39.7 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 6/134 (4%)

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN-KAFAIFCLLMGILMLKRDRLYC 149
           +  +I  KI+   I    +   + + +I  +    +N   FA   L +   + K   L  
Sbjct: 2   QSKSIVWKIIPIGIVSALLGAYIGAEVILMLPTHVINYIIFAFLPLGLATTLFKGKLLKQ 61

Query: 150 ERK----FPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSA 204
           E +           +I  ++ GF  G  G G G IF   L L    S+ +A+ATS   + 
Sbjct: 62  ENQEQEIKNSALSVFITCLIVGFYDGFFGPGTGSIFIIALFLINKLSLLRASATSKIFNF 121

Query: 205 LIAFPALLVRIYSG 218
                A +    +G
Sbjct: 122 SSNIGAFVSFAIAG 135


>gi|326202548|ref|ZP_08192416.1| protein of unknown function DUF81 [Clostridium papyrosolvens DSM
           2782]
 gi|325987132|gb|EGD47960.1| protein of unknown function DUF81 [Clostridium papyrosolvens DSM
           2782]
          Length = 123

 Score = 39.7 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 9/97 (9%)

Query: 50  PVLS-KAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           P L                HVA   +L    PT++++ + H ++  +N ++    +    
Sbjct: 26  PALVIFVKPEQ--------HVAQSVNLLFFIPTAIVALVIHIKNKNVNFRMGIPIVISGL 77

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              V+ S +   ++   L   F IF LLMG+  +   
Sbjct: 78  GGAVLGSKLALAMNGGTLKHIFGIFLLLMGLYEIFGK 114


>gi|16263021|ref|NP_435814.1| hypothetical protein SMa1050 [Sinorhizobium meliloti 1021]
 gi|14523675|gb|AAK65226.1| Hypothetical protein SMa1050 [Sinorhizobium meliloti 1021]
          Length = 181

 Score = 39.7 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 6/112 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I   + +  + G + GL G GG ++  P+L     +         HVA+GT    ++  +
Sbjct: 5   ILAAVGSGGIVGFMLGLLGGGGSILATPLLLYVVGV------TQPHVAIGTGALAVSVNA 58

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
             +F  H   G +  +    +  +  +  +  S +   +D   L   F I  
Sbjct: 59  FANFASHAIKGHVWWRCAAVFSALGVLGALGGSSLGKAMDGDRLIFLFGILM 110


>gi|85059604|ref|YP_455306.1| hypothetical protein SG1626 [Sodalis glossinidius str. 'morsitans']
 gi|84780124|dbj|BAE74901.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 172

 Score = 39.7 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 59/155 (38%), Gaps = 5/155 (3%)

Query: 46  LVMVPVLSK-AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWI 104
           LV+ P L    F +  +   +    A+ T+       S  + +   R GT+ +   K  I
Sbjct: 4   LVISPWLLAGLFFVAVLAAGLPPTQALATNKLQGVGGSFSASLYFVRRGTVKLAGQKRTI 63

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE---RKFPDNYVKYI 161
            +  + +   +++I HV    L +   +  + +G+  L   RL  E   R+        +
Sbjct: 64  AMTLLGSAAGAILIQHVLAELLRQLLPLLVIAIGLYFLLMPRLGAEDRQRRLSGWPFALV 123

Query: 162 WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKA 195
            G   GF     G G G F  L  ++    ++  A
Sbjct: 124 GGSCVGFYDDFFGPGAGPFYALAFVMLCRFNLATA 158


>gi|120553131|ref|YP_957482.1| permease [Marinobacter aquaeolei VT8]
 gi|120322980|gb|ABM17295.1| permease [Marinobacter aquaeolei VT8]
          Length = 197

 Score = 39.7 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 63/200 (31%), Gaps = 16/200 (8%)

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           +      S         I+ K++  +   +     + + ++  +       + A+F L +
Sbjct: 1   MIQLGSNSGRAILTRHHIDWKVIAAFAPGVLAGAGLGAWLLVDLPAHLWQLSIALFVLYL 60

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
                        +     +  +I   +T F+S  +G  G       +       ++  A
Sbjct: 61  CW------GPGLPKASFGPFGVFIASAITSFVSLFVGATG-PLVAAFIKQIHTDRFRTVA 113

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T      L   P  LV   +G+  +           +  +L ++      T L   L   
Sbjct: 114 TFGTAMTLQHAPKALVFGVAGFVFSE---------WLLFILAMIACGFAGTWLGLHLLKS 164

Query: 258 IGKKYLTIGFSMIMFTTSFV 277
           I  ++    F++++   +F 
Sbjct: 165 INNRWFHTAFNLVLTLLAFR 184


>gi|299143619|ref|ZP_07036699.1| putative membrane protein [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518104|gb|EFI41843.1| putative membrane protein [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 253

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 60/163 (36%), Gaps = 7/163 (4%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             + +H+A+GT+       + M+ +   ++  ++ K+    +    +   + + ++  + 
Sbjct: 40  AGLPIHMALGTTKMQSTCGTAMATLRFIKNRFVSFKLAFPAVIAAFLGASIGAKLMMFLG 99

Query: 123 KSFLNKAFAIFCLLMGILMLKRDRLYCERK------FPDNYVKYIWGMVTGFLSGALGVG 176
           +  L+K   I   +   L+L +                      I   + G   G  G G
Sbjct: 100 EDQLHKIMIIILPVAAFLVLNKKFFDSATSDELIINKKTYITVTISAFLVGIYDGMYGPG 159

Query: 177 GGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            G F  L   +F   ++  A   +  ++      AL++ + +G
Sbjct: 160 TGTFLILAFTVFAKMNVQFANGHAKIINLASNITALIIFLLNG 202


>gi|159041511|ref|YP_001540763.1| hypothetical protein Cmaq_0941 [Caldivirga maquilingensis IC-167]
 gi|157920346|gb|ABW01773.1| protein of unknown function DUF81 [Caldivirga maquilingensis
           IC-167]
          Length = 310

 Score = 39.3 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 100/296 (33%), Gaps = 57/296 (19%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + ++ L++    + G ++ L GVGGG++  P++        I+  I       T L +  
Sbjct: 20  LIFLVLLMCICIVIGFIAALAGVGGGVLFTPIMMA---FTSINPDIIR----STGLAIAT 72

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-------SFLNKAFAI 132
            +S++S   +      N +++        +  ++ S++  H+         S +  +  +
Sbjct: 73  MSSLVSAKPYLHGNLANFRLVLVSSIPYTLFAIIGSVIGLHITSVFGSVGKSIIRLSLGM 132

Query: 133 FCLLMGILMLKRDRLYCERKFPDNY------------------------------VKYIW 162
             L +  L + R       K P                                    + 
Sbjct: 133 LVLAIAALFIVRGNKTDIPKPPSGGDKLAELLRLNSSYVEKSLNLLIEYKVVNLQWGLLS 192

Query: 163 GMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
            M  G +SG  G+G G     +  +     +  A+A+S  +  +    A+ V I +G  +
Sbjct: 193 LMGIGLVSGMFGLGAGWAIVPVYSMLMYIPLKVASASSIVLIGIGDTAAMWVYINNGAFI 252

Query: 222 NGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                       +  +L I    I+   L +++   +   ++ I   M+M      
Sbjct: 253 PLFA--------VPCLLGI----IIGARLGSRIMPKVKISWIRILVIMVMVIAGLR 296



 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 55/134 (41%), Gaps = 7/134 (5%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           L  +  V  +   +++    G +SG+FG+G G  +VPV S           I + VA  +
Sbjct: 177 LLIEYKVVNLQWGLLSLMGIGLVSGMFGLGAGWAIVPVYSMLMY-------IPLKVASAS 229

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           S+ +I      +   +  +G          +  + I   + S ++  V  S++     + 
Sbjct: 230 SIVLIGIGDTAAMWVYINNGAFIPLFAVPCLLGIIIGARLGSRIMPKVKISWIRILVIMV 289

Query: 134 CLLMGILMLKRDRL 147
            ++ G+ ++++   
Sbjct: 290 MVIAGLRLIQQSLP 303


>gi|323135770|ref|ZP_08070853.1| protein of unknown function DUF81 [Methylocystis sp. ATCC 49242]
 gi|322398861|gb|EFY01380.1| protein of unknown function DUF81 [Methylocystis sp. ATCC 49242]
          Length = 280

 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 91/258 (35%), Gaps = 25/258 (9%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +++    G   GL G GG ++ VP+L      +G+ D    HVA+GTS   +A  ++ S 
Sbjct: 15  VLSGVFVGFSLGLVGGGGSVLAVPLLVY---FVGVGDP---HVAIGTSAVAVAANALASL 68

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             H R GTI  +    +           S +   +D   L   F +  L++G +M +R  
Sbjct: 69  GNHARAGTIKWRCASVFALFGVAGAFGGSTLGKMLDGQKLLALFGLLMLVVGAVMFRRRG 128

Query: 147 LYCERKFP----DNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAG 201
                       +       G+V G LSG  G+GGG      LML     I  A  +S  
Sbjct: 129 GEGFHAVRLNRDNFPRLAALGLVIGGLSGFFGIGGGFLVVPGLMLASDMPILYAIGSSLV 188

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
                          SG             V+      IL   ++   +       +  +
Sbjct: 189 SVTAFGVTTAGNYALSGL------------VDWPLAGGILGGGVIGGMIGAATGRRLSTQ 236

Query: 262 Y--LTIGFSMIMFTTSFV 277
              L   F+MI+   +  
Sbjct: 237 RGALAAVFAMIIVAVAIY 254


>gi|298528920|ref|ZP_07016323.1| protein of unknown function DUF81 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298510356|gb|EFI34259.1| protein of unknown function DUF81 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 364

 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 7/135 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +  A  + G +SG FG+G G  MVP          +     M VA   S+ ++     +
Sbjct: 213 WLFAAILIVGLVSGFFGMGAGWAMVP-------FQNVVAGTPMKVAAANSVVLLGMGDCV 265

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +   +   G +       W+    +  +  +L++  +   F+              ++ R
Sbjct: 266 AVWPYFIMGALIPMFAAPWLAGQVVGGLFGALVLVQIKAGFVRWLLIGLMGFSCWGLITR 325

Query: 145 DRLYCERKFPDNYVK 159
                E   P  +  
Sbjct: 326 ALSMWEVIQPPPHWL 340


>gi|171185209|ref|YP_001794128.1| V-type ATPase 116 kDa subunit [Thermoproteus neutrophilus V24Sta]
 gi|170934421|gb|ACB39682.1| V-type ATPase 116 kDa subunit [Thermoproteus neutrophilus V24Sta]
          Length = 766

 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 40/129 (31%), Gaps = 5/129 (3%)

Query: 93  GTINMKILKDWIFVLPITTVVTS-----LMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
           G +  + L      +   +++        +   +   ++      F      +++ R R 
Sbjct: 599 GIVLPQALIFLSLGMVFFSLIKEAFHMEFLAPLLQLPWMYIFLVAFIWSAAGMLILRARY 658

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
               + P    ++I G V G L+    +       +L+L +G     A   +  +     
Sbjct: 659 KHHEEAPPLTEEFIMGFVEGSLAALANIPSFSRLVILILIHGVLTKLANGVAIALGPAGI 718

Query: 208 FPALLVRIY 216
             A+     
Sbjct: 719 LFAVFAHAL 727


>gi|113954377|ref|YP_731184.1| hypothetical protein sync_1981 [Synechococcus sp. CC9311]
 gi|113881728|gb|ABI46686.1| putative membrane protein [Synechococcus sp. CC9311]
          Length = 255

 Score = 39.3 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 55/173 (31%), Gaps = 7/173 (4%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
               MG+      H A+ TS   I PT++     H R  T+  +          +T +  
Sbjct: 34  LLLWMGLSP----HQALATSTFAIVPTALSGTATHLRARTVPAQAGLAIGIAAFVTALFF 89

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC--ERKFPDNYVKYIWGMVTGFLSGA 172
           S +        L    ++  L +   +  R         +          G + GF  G 
Sbjct: 90  SRLGRLAAGWHLLALQSLLYLFLASTIRSRPHDSGSDSDQTLSLPGLTAVGGLAGFAGGM 149

Query: 173 LGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
           LG+GGG+    +M+      I  A   S    A     A    +  G G   L
Sbjct: 150 LGLGGGLVMVPVMVRGLAVPIRLAIRFSTVAVACSTAAASFQFLSEGRGQPTL 202


>gi|308272705|emb|CBX29309.1| hypothetical protein N47_J02900 [uncultured Desulfobacterium sp.]
          Length = 320

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 40/119 (33%), Gaps = 9/119 (7%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +F+    + + G+ G  +++P             S        T+             
Sbjct: 17  LVAFVISFFTSMGGISGAFLLLPFQVSVLGYTNPSVS-------ATNQLFNIVAIPSGVY 69

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLM-ISHVDKSFLNKAFAIFCLL-MGILMLKR 144
            + + G +   +    +        + + + + ++      K FA F LL +GI +++ 
Sbjct: 70  RYCKEGRMVWPLAWVIVAGTLPGVFIGAFVRVKYLPDPKNFKLFAAFVLLYIGIRLIRD 128


>gi|253996184|ref|YP_003048248.1| hypothetical protein Mmol_0811 [Methylotenera mobilis JLW8]
 gi|253982863|gb|ACT47721.1| protein of unknown function DUF81 [Methylotenera mobilis JLW8]
          Length = 277

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 34/77 (44%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            + + TSL + A  ++   + +  + TI  KI   ++    I +++  L  +++  S   
Sbjct: 192 RMVVATSLAMTALVALSGVITYAIYSTIEWKIAFPFVVATLIGSMLGKLKSANISISQSR 251

Query: 128 KAFAIFCLLMGILMLKR 144
             F I  L + I+M   
Sbjct: 252 LTFGIISLFIAIVMCLN 268



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 7/128 (5%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           +VD   + I++    G L  + G GG ++ +PVL           ++ +  A+  +L  I
Sbjct: 1   MVDLNLVAILSGLAIGFLMSITGAGGAILSLPVLMFIM-------NVSLKEAVPIALLAI 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              +  + +   + G +  K       +  IT  V   +   +   +L   F +    +G
Sbjct: 54  FVAAGAAVVIGLKQGVVRYKAATLLAVMGVITAPVGVYVAHQLTALWLQLLFVVLLFFVG 113

Query: 139 ILMLKRDR 146
           I  L   R
Sbjct: 114 IQALLSSR 121


>gi|294944335|ref|XP_002784204.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239897238|gb|EER16000.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 354

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 38/87 (43%)

Query: 165 VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
             GFL+  +G+ GGI    L++F G +  +A+ T + V  + +    L     G+  +  
Sbjct: 261 GIGFLAAVVGISGGIIITPLVMFTGLTPPQASGTGSVVILVNSSSLALSFGLGGYLPDAS 320

Query: 225 PPWSLGFVNIGAVLIILPISILITPLA 251
             W +     GA+   + ++ ++    
Sbjct: 321 ALWIIALPFCGALTGDIILTRIMRRTG 347


>gi|225873417|ref|YP_002754876.1| hypothetical protein ACP_1802 [Acidobacterium capsulatum ATCC
           51196]
 gi|225791401|gb|ACO31491.1| putative membrane protein [Acidobacterium capsulatum ATCC 51196]
          Length = 251

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 81/264 (30%), Gaps = 34/264 (12%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
            ++   ++  ++ L GVG G + VP+L     +  +       VA+   L   A   ++ 
Sbjct: 3   YLLGGLIAAFIA-LTGVGAGTITVPLLILFLHVPAV-------VAVTVGLMYSAAVKLIL 54

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK----SFLNKAFAIFCLLMGI-L 140
                    ++ K+L   +       ++ +L++           +     +  +   +  
Sbjct: 55  VPAQIWRKNVSWKVLGFMLAGGAPGVLIGALLLRRFAGPGAERGVEGVLGLILIFTAVYQ 114

Query: 141 MLKRDRLYCERKFPDN------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
           ++   R    R    N       +    G   GF S   G    + +  L+     +  +
Sbjct: 115 IIFSFRPVTARPENQNKLRLLPLLMLPVGAEVGFSSAGAGA---LGSAALLTLTQLTPAQ 171

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
              T       ++        ++      L            +L ++    +   L T L
Sbjct: 172 VVGTDILFGFTLSLLGGSAHWFAHTLNAHL------------LLHMVEGGAIGAVLGTLL 219

Query: 255 SYMIGKKYLTIGFSMIMFTTSFVF 278
           +  + K+ L     + +     +F
Sbjct: 220 APRVPKRPLRFALWIWLLLIGSMF 243


>gi|87120615|ref|ZP_01076509.1| hypothetical protein MED121_22697 [Marinomonas sp. MED121]
 gi|86164258|gb|EAQ65529.1| hypothetical protein MED121_22697 [Marinomonas sp. MED121]
          Length = 266

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 71/202 (35%), Gaps = 15/202 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + +  + +FL+ TLS + G G  L+++   S  F        I   +A+ T        
Sbjct: 28  MLLVFFIMAFLAATLSAIAGFGSALILISASSLIF-------DIKWSIAITT----FFYF 76

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              S   +     I   ++     +      + +  +  ++ ++L+   A   LL   L 
Sbjct: 77  YNTSLKTYYFRTHICWPLVFKLSLLAIPGVFIGAYTLLSINSAWLSYGLAFMSLLYLCLD 136

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           + +     +     + V  + G+V GF+SG  G  G I   L+            A+ A 
Sbjct: 137 VFKLIPRYKVH---DGVLVLTGLVYGFISGVFG-SGSIIKALVFKQLNLPKEAFVASMAA 192

Query: 202 VSALIAFPALLVRIYSGWGLNG 223
            +  +    L V + +      
Sbjct: 193 SALPLNLIKLAVFMSASILAPD 214


>gi|311696782|gb|ADP99655.1| permease [marine bacterium HP15]
          Length = 256

 Score = 39.3 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 62/184 (33%), Gaps = 16/184 (8%)

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
            I+ +++  ++  + +   + + ++ ++         A+F L +             +  
Sbjct: 77  NIDWRVIAAFLPGVIVGAALGAWLLVNLPAHIWQLTIALFVLYLCW------GPALPKGA 130

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
                 ++   +T F+S  +G  G       +       ++  AT A    L   P  LV
Sbjct: 131 FGAPGVFLASALTSFVSLFVGATG-PLVAAFIKQIHTDRFRTVATFATAMTLQHAPKALV 189

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
              +G+           F  +  +L ++      T L   +   +     T+ F++++  
Sbjct: 190 FGAAGFMF---------FEWLPFILAMIACGFAGTWLGLHVLRSLSNSKFTLIFNIVLTA 240

Query: 274 TSFV 277
            +  
Sbjct: 241 LAIR 244


>gi|254423646|ref|ZP_05037364.1| conserved domain protein, putative [Synechococcus sp. PCC 7335]
 gi|196191135|gb|EDX86099.1| conserved domain protein, putative [Synechococcus sp. PCC 7335]
          Length = 242

 Score = 39.3 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 55/154 (35%), Gaps = 14/154 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +II+   ++  + G+ G G  L+++PVL           S    + +   L  I   ++
Sbjct: 5   AIIILTVGVASFIRGVSGFGAALIIMPVL-----------SGLTSIYVAAPLVAILGLTI 53

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + +      + +  ++        +   +  +M+  +  +++  A  +  ++  I  L 
Sbjct: 54  DTLLCFYYRRSFDWGLVAKLWIGSILGIPLGFVMLRFIPGNWMLLALGLMIVVYAIYALF 113

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
              +            Y  G + G L  +  + G
Sbjct: 114 DPAMPI---LQSQRWMYGTGFLCGALGSSYNIPG 144


>gi|110634874|ref|YP_675082.1| hypothetical protein Meso_2533 [Mesorhizobium sp. BNC1]
 gi|110285858|gb|ABG63917.1| protein of unknown function DUF81 [Chelativorans sp. BNC1]
          Length = 261

 Score = 39.3 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 11/179 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VP++      +G+ +    H+A+GTS   +A +++ + + + R G +  +    +  
Sbjct: 31  ILAVPLMVYV---VGVPNP---HLAIGTSAVAVAASALGNLVGYARFGKVKWRCAAIYSS 84

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR----DRLYCERKFPDNYVKYI 161
              I   + S +   V    L   FA+  L++G LM +R         +    +      
Sbjct: 85  AGVIGAFIGSTIGKMVSGQHLLILFALLMLIVGALMFRRGGNDGNPGAQCSRENAPAVVT 144

Query: 162 WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
           +G +TG  SG  G+GGG      L+   G  I  A  +S    A       L    +G 
Sbjct: 145 FGGLTGIFSGFFGIGGGFLIVPGLIAATGMPILFAIGSSLVAVAAFGLTTALNYAIAGL 203


>gi|255082402|ref|XP_002504187.1| 4-toluene sulfonate uptake permease [Micromonas sp. RCC299]
 gi|226519455|gb|ACO65445.1| 4-toluene sulfonate uptake permease [Micromonas sp. RCC299]
          Length = 374

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 11/109 (10%)

Query: 34  GTLSGLFG----VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
           G ++G+FG    VGGG+++VP ++ A         I   V  GTSL  +  T+ ++    
Sbjct: 80  GLVAGMFGSVVGVGGGVLIVPAITSAVP-------IPQRVVTGTSLIAVLSTAGVATYNF 132

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              G ++            ++    + + + +D   L +  A F L   
Sbjct: 133 SHAGLVDPTAAAILGGSAMLSAPFGARLTTRLDCVQLRRILAYFLLCAA 181



 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 34/94 (36%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
            L+ +   +     +GTSL  + P S ++ ++HR  G ++ ++         +   V S 
Sbjct: 280 PLLALVSPLPQAAVLGTSLLAMLPPSAVALLQHRALGNVDFRMGAALAAGTALGGAVGSG 339

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
           M     +  L   F    L +        R   +
Sbjct: 340 MAVDAPRGALEAVFFCGMLFLSRRTFATIRPKAK 373



 Score = 38.5 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 15/124 (12%)

Query: 156 NYVKYIWGMVTGFLSGALG----VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
                      G ++G  G    VGGG+     +      I +   T   + A+++   +
Sbjct: 69  RAKAVAMAGPLGLVAGMFGSVVGVGGGVLIVPAIT-SAVPIPQRVVTGTSLIAVLSTAGV 127

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
               +S            G V+  A  I+   ++L  P   +L+  +    L    +  +
Sbjct: 128 ATYNFS----------HAGLVDPTAAAILGGSAMLSAPFGARLTTRLDCVQLRRILAYFL 177

Query: 272 FTTS 275
              +
Sbjct: 178 LCAA 181


>gi|87302513|ref|ZP_01085330.1| hypothetical protein WH5701_11404 [Synechococcus sp. WH 5701]
 gi|87282857|gb|EAQ74814.1| hypothetical protein WH5701_11404 [Synechococcus sp. WH 5701]
          Length = 253

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 58/183 (31%), Gaps = 8/183 (4%)

Query: 51  VLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPIT 110
           V S    L+G+      H A+ TS   I PT++     H R G +             ++
Sbjct: 29  VFSPMLLLVGLPP----HQALATSTLAIVPTTLGGTWVHLRQGRVLPAAGLAIGLSAALS 84

Query: 111 TVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF---PDNYVKYIWGMVTG 167
            ++ S +   +    L    A+  + + + +  R            P   +  +  +   
Sbjct: 85  GLLFSRLGGLLSGWQLLGLQALMYVTLTLTISSRRDKEPAPSPGPAPLPALALVGSLAGL 144

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
                   GG +   L++      + +A   S       +  A +  +  G    G    
Sbjct: 145 AGGLLGVGGGLLMVPLMLGSLRLPVREAIRLSTLAVLCSSSAASVTFLI-GAKAQGTIAL 203

Query: 228 SLG 230
           +LG
Sbjct: 204 TLG 206


>gi|227538475|ref|ZP_03968524.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241661|gb|EEI91676.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 148

 Score = 39.3 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 57/153 (37%), Gaps = 21/153 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  + + L G   GL G GG ++ VP+L     +  I       +A   SL ++  TS+
Sbjct: 3   LLAYLLAVLIGISLGLIGSGGSILTVPILVYILDIDPI-------LATAYSLFIVGMTSL 55

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVT-SLMISHVD-------------KSFLNKA 129
              +       ++ K++  +     I  + T   ++ H+                F+   
Sbjct: 56  AGGISQTISKQVDYKMVLLFGIPSIIMVLFTRGYIMPHIPQEMGRVGDFVLTKGMFVMVL 115

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIW 162
           FA+  L   + M++  +   + K      K ++
Sbjct: 116 FAVIMLFASVSMIRSRKKRLKPKSSLTITKALY 148


>gi|328886758|emb|CCA59997.1| hypothetical protein SVEN_6711 [Streptomyces venezuelae ATCC 10712]
          Length = 271

 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 63/195 (32%), Gaps = 7/195 (3%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++  A    G L G+ G+GG    +P+L   F    +   I       + + V+      
Sbjct: 18  VVFGAGAAIGVLGGMIGLGGAEFRLPLLIGLFGFAALSAVILNKAM--SLVVVLVALPAR 75

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                         +  + +    +     +     +  + L K  A   +LM   ++  
Sbjct: 76  LAAVPAAEVAARWPVAVNLLAGSLLGAWAGASWAVRMRSTTLYKVLAALMVLMAAALVLT 135

Query: 145 DRLYCERKFPDNYVK----YIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATS 199
                +      + +     + G   G ++  +GV GG +    ++L +G  I  A + S
Sbjct: 136 HTATLDTVNLPLWAQIPAGVVAGFGIGVVAAIMGVAGGELLIPTIVLLFGEDIKTAGSLS 195

Query: 200 AGVSALIAFPALLVR 214
             VS      A    
Sbjct: 196 LLVSLPTMLVAFARY 210


>gi|220934771|ref|YP_002513670.1| protein of unknown function DUF81 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996081|gb|ACL72683.1| protein of unknown function DUF81 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 250

 Score = 39.3 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 59/142 (41%), Gaps = 16/142 (11%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
            GG ++ +PVL      MG+D +     A GT+   I   ++ +  ++R  G  ++++  
Sbjct: 24  AGGSMLTLPVLMF----MGLDSTT----ANGTNRVGIVLQNITATWKYRSAGHRHLRLGL 75

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER--------KF 153
                  +  +V + + + V +        +  +   +LML    ++ E         ++
Sbjct: 76  KLSVPAVLGAIVGAWVATLVGEDLFRWILILVMVGSSVLMLLPMPVHRETLYLDESHLRW 135

Query: 154 PDNYVKYIWGMVTGFLSGALGV 175
           P   V  + G   GF+  A+G+
Sbjct: 136 PVILVMAVIGFYGGFIQVAVGI 157


>gi|112143928|gb|ABI13173.1| predicted permease [Emiliania huxleyi]
          Length = 278

 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 6/140 (4%)

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL-LMGI 139
           T++ S + HRR G ++   LK       +  +  + ++S+   +      A     L  I
Sbjct: 32  TTLASGLAHRRAGNVDEASLKKVAPPGALGALAGAALLSYTPAATARLLSATLLFGLGAI 91

Query: 140 LMLKRDRLYCERK----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYK 194
           + L+  R+   R      P   V  + G++ GF+    G G G      L+        +
Sbjct: 92  VALRFYRIAPRRAEAAGAPSATVLRLIGLLGGFVDSTGGGGWGPIATSGLLAGSSLPPCR 151

Query: 195 ATATSAGVSALIAFPALLVR 214
              T++     +   A+   
Sbjct: 152 VVGTTSASEFFVTVAAVAGF 171


>gi|289806447|ref|ZP_06537076.1| hypothetical protein Salmonellaentericaenterica_19242 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 161

 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 16/133 (12%)

Query: 126 LNKAFAIFCLLMGILMLKRDRLYCE---RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
           + +   I  + +G+  L   +L  E   R+        I G   GF  G  G   G F  
Sbjct: 1   MRQILPILVIFIGLYFLLMPKLGEEDRQRRLYGLPFALIAGGCVGFYDGFFGPAAGSFYA 60

Query: 183 L-LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIIL 241
           L  +   G ++ K+TA +  ++A      LL+ I  G  +     W+ GFV       +L
Sbjct: 61  LAFVTLCGYNLAKSTAHAKVLNATSNVGGLLLFIIGGKVI-----WATGFV-------ML 108

Query: 242 PISILITPLATKL 254
               L   + ++L
Sbjct: 109 VGQFLGARMGSRL 121


>gi|219124322|ref|XP_002182456.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|219128835|ref|XP_002184609.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404059|gb|EEC44008.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406417|gb|EEC46357.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 392

 Score = 39.3 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 49/168 (29%), Gaps = 31/168 (18%)

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS--FLNKAFAI 132
           L       +     + R G ++  +   ++ +   T+   +L+   +     FL   ++ 
Sbjct: 141 LLTECFGFLSGLSGYWRRGLVDWGVAFKFLGLALPTSFAGALLEPSLAGETTFLRILYST 200

Query: 133 FCLLMGILMLKRDRLYCERK--------------------------FPDNYVKYIWGMVT 166
             L +   +L  ++     +                           PD       G  T
Sbjct: 201 LMLTLCAFLLFSEKPVALSEECDFSTQEDPIIRTKTAVDGTVFTYLEPDKLTWKTIGATT 260

Query: 167 GFLS--GALGVGGGIFTNLLMLFYG-ASIYKATATSAGVSALIAFPAL 211
              S  G LGVG G      ++      +  A  TS  V  L A  A 
Sbjct: 261 AGASLTGLLGVGIGEVILPQLVRISCMPLPVAAGTSVAVVVLTALTAA 308


>gi|303328349|ref|ZP_07358787.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
 gi|302861679|gb|EFL84615.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
          Length = 354

 Score = 39.3 bits (91), Expect = 0.65,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 8/79 (10%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GG  ++ P L+             M  A+GT +  +A  S++S M H + G ++  +   
Sbjct: 37  GGAWMVTPGLNIL--------GFPMAFAIGTDVAQMAGKSLISTMRHGKFGNVDYALGLT 88

Query: 103 WIFVLPITTVVTSLMISHV 121
            +    +   + + M+  +
Sbjct: 89  MLVGTVVGVEIGAQMVMWL 107



 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 11/125 (8%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           P L               H+A+GT L  +A + +     +   G + +      +    I
Sbjct: 213 PALVYLI-------GCPTHLAVGTDLFEVAISGLYGTASYAYKGRVELLAAIIMLCGAAI 265

Query: 110 TTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM--VTG 167
              + ++   +V    +   F     ++G LM    +L   +     ++        V G
Sbjct: 266 GAQIGTVATKYVKGYGIRIVFG--LAVLGCLMSVVLKLLQAQFPVYGWILGPLATVEVLG 323

Query: 168 FLSGA 172
           F+S  
Sbjct: 324 FVSAI 328


>gi|317969595|ref|ZP_07970985.1| hypothetical protein SCB02_08670 [Synechococcus sp. CB0205]
          Length = 250

 Score = 39.3 bits (91), Expect = 0.65,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 58/165 (35%), Gaps = 5/165 (3%)

Query: 51  VLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPIT 110
           V S     +G+      H A+ TS   I PT++   + H R G +  +            
Sbjct: 29  VFSPLLLWIGLPP----HQALATSTLAIVPTTMAGSLTHWRSGQVPAQAALAISAGAAFG 84

Query: 111 TVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
             + S +   ++   L    A+   L+ +++  R                  G+V G  S
Sbjct: 85  GGLFSRVGHSLEGWQLLALQALMYGLLALVIEPRRTGGNSASTVPVRGLIGVGLVAGLSS 144

Query: 171 GALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVR 214
           G LGVGGG+    LM+      +Y+A   S       +  A    
Sbjct: 145 GLLGVGGGLVMVPLMVRGLRLGVYQAIRLSTMAVFASSLVASFTF 189


>gi|256751758|ref|ZP_05492632.1| protein of unknown function DUF81 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256749427|gb|EEU62457.1| protein of unknown function DUF81 [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 251

 Score = 39.3 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 85/263 (32%), Gaps = 29/263 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +I+VAS L+G  + + G GG L+  P L     +  +  +I   VA+ T        SV
Sbjct: 5   VIILVASILAGATNAIAG-GGTLITFPALVWV-GINPLSSNITNTVALWTG-------SV 55

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                 +       ++L+       +  ++ + ++        N       L   +++  
Sbjct: 56  TGAWAFKERLAETKELLRFLTLPSLLGGILGAYLLMITPHKVFNFVVPFLVLFATVILAL 115

Query: 144 RDRLY-------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA-SIYKA 195
            DR+          R+       +I   +T    G    G GI     +   G   I+ A
Sbjct: 116 NDRINKFNLDSEEGREKKSLVFVFILQFLTSLYGGYFAAGIGILMLATLGIAGITDIHTA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
                 +S  I   + LV ++SG             V      I++    L      K+S
Sbjct: 176 NGIKNLLSLFINVTSGLVLLFSGK------------VVWPFAFILMIGFALGGYWGAKVS 223

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
                K +     +     +  F
Sbjct: 224 QRFDNKKVKNFVVLWGIALAIAF 246


>gi|194467160|ref|ZP_03073147.1| protein of unknown function DUF81 [Lactobacillus reuteri 100-23]
 gi|194454196|gb|EDX43093.1| protein of unknown function DUF81 [Lactobacillus reuteri 100-23]
          Length = 261

 Score = 39.3 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 80/268 (29%), Gaps = 31/268 (11%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V ++ L++     SG +S   G+   LV  P L            +   +A  TS     
Sbjct: 4   VVFVLLLLGIGIFSGIISAAAGL-ASLVSYPSLLAL--------GLPPVMANVTSAFSTI 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             +  S     +    N + L   + ++   +++ + ++  V   +  +   +   L GI
Sbjct: 55  TGNYSSVFSSFKELEHNRRQLWIILPLVFAGSIIGAFLLFAVPSKWFAELVPLCIALAGI 114

Query: 140 LMLKRDRLYCE------------RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
           ++L                    +     ++  I   + G  SG    G G+    L+  
Sbjct: 115 ILLFPHHPKQSVGTMAGNSKLFGKSRIGQFLSIIGIFIVGIYSGFFNAGAGVLMLTLLTV 174

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                  A   +   +  +        I                +    V+ ++  +++ 
Sbjct: 175 INRQKSFAVNNALK-NVAMTVTNTTSWIVFALETT---------IYWNYVIPLMIGNVIG 224

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTS 275
             L   +   +  + + I   +     +
Sbjct: 225 GYLGPIIVRHLPGRLMQIIVGIGSLILA 252



 Score = 38.5 bits (89), Expect = 0.96,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 48/121 (39%), Gaps = 6/121 (4%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L I+  F+ G  SG F  G G++M+ +L+   +      +  +          +  T+  
Sbjct: 145 LSIIGIFIVGIYSGFFNAGAGVLMLTLLTVINRQKSFAVNNALKN------VAMTVTNTT 198

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           S++      TI    +   +    I   +  +++ H+    +     I  L++ + ++ R
Sbjct: 199 SWIVFALETTIYWNYVIPLMIGNVIGGYLGPIIVRHLPGRLMQIIVGIGSLILAVSLVIR 258

Query: 145 D 145
           +
Sbjct: 259 N 259


>gi|88861222|ref|ZP_01135855.1| predicted Permease [Pseudoalteromonas tunicata D2]
 gi|88816815|gb|EAR26637.1| predicted Permease [Pseudoalteromonas tunicata D2]
          Length = 298

 Score = 39.3 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 60/177 (33%), Gaps = 20/177 (11%)

Query: 98  KILKDWIFVLPITTVVTS-----LMISHVDKSFLNKAFAIFCLLMGILMLK----RDRLY 148
           +  K  +    +  +         +  H+ +      F++F L+    +L+         
Sbjct: 107 RYFKQVVLFALLGAIPGVIISLLFIAEHLPRLATKTVFSVFLLVFSFTLLRLHFTHKNFQ 166

Query: 149 CERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATSAGVSALIA 207
            +      Y+  + G + G  SG +G G  I    LL+LFY   +  ATATS  + A  +
Sbjct: 167 EQPDLRSPYLITLVGFIGGLASGIVGSGADIMVFALLVLFYKKELKAATATSVIIMAATS 226

Query: 208 FPAL-LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
                   +        +  +         +   +P+ ++  PL   +   +    L
Sbjct: 227 IVGSWCNFVLLDGLTPQISAF---------LWAAVPVVVIGAPLGAFVCAKVKAGVL 274


>gi|333026813|ref|ZP_08454877.1| hypothetical protein STTU_4317 [Streptomyces sp. Tu6071]
 gi|332746665|gb|EGJ77106.1| hypothetical protein STTU_4317 [Streptomyces sp. Tu6071]
          Length = 358

 Score = 39.3 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 11/117 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++VA F+ G +SGL GVG   V   VL   F+       +   VA  T++ ++   S+
Sbjct: 189 AVLVVAGFVGGLVSGLVGVGENTVAFIVLVMLFR-------VSEKVATPTTVILMTVVSL 241

Query: 84  MSFMEHRR----HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +F+ H           +      + V+ +   + +L+ S + +S +         +
Sbjct: 242 AAFLSHVLVIDDFSAARVDYWLAAVPVVCVGAPLGALICSALSRSTIRNVLVALITV 298


>gi|307700599|ref|ZP_07637631.1| putative membrane protein [Mobiluncus mulieris FB024-16]
 gi|307614244|gb|EFN93481.1| putative membrane protein [Mobiluncus mulieris FB024-16]
          Length = 305

 Score = 39.3 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 7/143 (4%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + L +V     G + G  G GGG++ VP L               H A   SL ++ 
Sbjct: 1   MESLLLALVIGLGVGCIVGALGAGGGILSVPALVYLL-------GQSPHAAGAGSLIIVG 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+++S +       +  K    +     + T + S +   V    L   F +  +++G+
Sbjct: 54  ATALISLIPRTWEHRVRWKDGLIFGLCSTLATFLGSRLSFWVSGWVLMLLFGVLLVMVGM 113

Query: 140 LMLKRDRLYCERKFPDNYVKYIW 162
           +ML +           +      
Sbjct: 114 VMLWKAWQSARTAQRGSGGNGAA 136


>gi|298487175|ref|ZP_07005224.1| Membrane protein, putative [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298158199|gb|EFH99270.1| Membrane protein, putative [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 285

 Score = 39.3 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 49/130 (37%), Gaps = 9/130 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  + ++ V +F++G +  + G GGGL+  P L        +   +  H+ +GT+     
Sbjct: 9   LTTLAILAVVAFIAGFIDAIAG-GGGLLTTPAL--------MTAGLPPHLVLGTNKLSST 59

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R    + +     +    +     +++  ++   +LN+   +     G+
Sbjct: 60  FGSATASFTFYRRKLFHPRQWIHAVVGTAVGAAAGAVIAHYLPAEWLNQMLPVIVFGCGL 119

Query: 140 LMLKRDRLYC 149
            +L       
Sbjct: 120 YLLFGGTPKA 129


>gi|254473161|ref|ZP_05086559.1| putative integral membrane protein [Pseudovibrio sp. JE062]
 gi|211957882|gb|EEA93084.1| putative integral membrane protein [Pseudovibrio sp. JE062]
          Length = 252

 Score = 39.3 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 50/144 (34%), Gaps = 6/144 (4%)

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           L V+    + S+           K L   I    + T++     +++ ++ +     +  
Sbjct: 56  LLVMDAVGLFSYRAIYCR-----KTLLILIPAGLLGTLIGYFTAAYISETLIRLVTGVIA 110

Query: 135 LLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
           L+  +     ++     K  +  +  IWG ++G  S     GG  F   ++    A    
Sbjct: 111 LIFVLDYWFNNKANKAPKPHNVILGGIWGTISGITSFIAHAGGAPFQMYVLPLRLAPPVM 170

Query: 195 ATATSAGVSALIAFPALLVRIYSG 218
           A  T+    A + F  +L     G
Sbjct: 171 A-GTAVIFFATVNFSKVLPYFALG 193


>gi|121609161|ref|YP_996968.1| hypothetical protein Veis_2202 [Verminephrobacter eiseniae EF01-2]
 gi|121553801|gb|ABM57950.1| protein of unknown function DUF81 [Verminephrobacter eiseniae
           EF01-2]
          Length = 251

 Score = 39.3 bits (91), Expect = 0.69,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 58/155 (37%), Gaps = 14/155 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + LI +   ++  + G+ G G  L+  PVL+    +  I   + +   +          +
Sbjct: 12  LILIFLVVTVAYVVFGMVGFGTALIATPVLAIFIPVSKIVPLLALMDMIA---------A 62

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + +   R   ++   LK  I ++ + +++ S ++       L     IF +   +  L
Sbjct: 63  LNNILRDGRKADVD--ELKRLIPLMMVGSLIGSAILLKSRPDILLLGLGIFVVASSLYSL 120

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
                  + +         +G++ G  S   G GG
Sbjct: 121 SGLSPKKKFQ---PRAAIPFGIIGGVFSALFGSGG 152


>gi|291619045|ref|YP_003521787.1| Hypothetical Protein PANA_3492 [Pantoea ananatis LMG 20103]
 gi|291154075|gb|ADD78659.1| Hypothetical Protein PANA_3492 [Pantoea ananatis LMG 20103]
 gi|327395379|dbj|BAK12801.1| hypothetical protein PAJ_2721 [Pantoea ananatis AJ13355]
          Length = 321

 Score = 39.3 bits (91), Expect = 0.69,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 100/271 (36%), Gaps = 26/271 (9%)

Query: 8   FSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
           F+L+     +   + +C+II   FL   +    G GG LV +P+++       +  +  M
Sbjct: 28  FTLLTPEGLEITTEVVCIIIAIMFLYTFIGICAGFGGALVTMPLVTLLLP---VKMAAPM 84

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            V +GT+      T++ +    R+      K     I        +    +S+     + 
Sbjct: 85  SVIVGTA------TALYATWLSRKETN--WKSALVLILFSFAGIPLGIYALSNFPDDVMK 136

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
               +F +L     L   RL    K   N++    G++ G L  A    G       ++ 
Sbjct: 137 TGLGVFLILYSFYSLFIPRLPVYDK---NWIVMPTGIIAGALGSAFATNG-----PPVVI 188

Query: 188 YGASIYKATATSAGVSALIAFPAL-LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
           YG  + +  A +A    L AF     + I  G   +G+   S     +  V+  +P  IL
Sbjct: 189 YG--MLRNLAPAAFRGTLNAFFTANNIAIIGGLTTSGILTVST----VKLVMFCIPTMIL 242

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            + +   +   I  +   +   +++  +  +
Sbjct: 243 GSLVGQYVHKRISVRAFRLMVFLLLIASGSM 273


>gi|281354973|ref|ZP_06241467.1| protein of unknown function DUF81 [Victivallis vadensis ATCC
           BAA-548]
 gi|281317853|gb|EFB01873.1| protein of unknown function DUF81 [Victivallis vadensis ATCC
           BAA-548]
          Length = 302

 Score = 39.3 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 67/183 (36%), Gaps = 26/183 (14%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++   +  +  F+     G +GVG G ++VP +                 A+G  L  +A
Sbjct: 3   LELWIVGPLIGFIGMMSGGYWGVGCGWIVVPTMLIL--------GFSPFEAVGIGLLQMA 54

Query: 80  PTSVMSFMEHRRHGTINM---KILKDWIFVLPITTVVTSLMISHVDKSF--------LNK 128
           P+++ + +  R+   I        +     L    ++TSL    ++           L+ 
Sbjct: 55  PSTLPTVI--RQFPEIGWGPGSAGRCLALPLGTGAMLTSLAGKSINARLFDRFGAAPLSL 112

Query: 129 AFAIFCLLMGILMLKRDRLYCERKFPD-----NYVKYIWGMVTGFLSGALGVGGGIFTNL 183
                 L + +  L       + + P        + +  G+ TG LS  LGVGGGI    
Sbjct: 113 MLCAVILAIAVQTLCSRTRCYDDELPPLTPRMGRIAFGTGLATGLLSSMLGVGGGILIRP 172

Query: 184 LML 186
           L+ 
Sbjct: 173 LLT 175


>gi|227540257|ref|ZP_03970306.1| integral membrane protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227239901|gb|EEI89916.1| integral membrane protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 252

 Score = 39.3 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 53/163 (32%), Gaps = 13/163 (7%)

Query: 45  GLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWI 104
           G + VP+ +  F        + + + M   + VI                     +K  +
Sbjct: 35  GTLAVPLFAFLFGARYSTGIVLILLCMADLIAVI-----------YYRKQFRWSEIKGML 83

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLL-MGILMLKRDRLYCERKFPDNYVKYIWG 163
               +  +    + +++D         I  L  +GI++              ++   ++G
Sbjct: 84  PAAFVGLLGGLFLANNMDDQLFRILMGICILSGVGIMIWMEKSKSVSNVAEKSWYAPLFG 143

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
            + GF S  +G   G   ++ +L      Y   AT A    ++
Sbjct: 144 FIAGF-STMIGNAAGPALSVYLLSRKLPKYAFVATGAWFIMIL 185


>gi|87118905|ref|ZP_01074804.1| Predicted permease [Marinomonas sp. MED121]
 gi|86166539|gb|EAQ67805.1| Predicted permease [Marinomonas sp. MED121]
          Length = 259

 Score = 39.3 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 92/274 (33%), Gaps = 35/274 (12%)

Query: 9   SLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMH 68
           SL   +S    V     +I+ +  +  ++ +FG GGG++M+ V+++      I       
Sbjct: 9   SLGQLISATASVQLSIFLILIASFTSFVTAVFGAGGGVMMLGVMAQVLPPQVIIP----- 63

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
                 L  +      S         I+ +++  ++    +  V+ SL++  +  + +  
Sbjct: 64  ------LHGVVQLGSNSGRALMSWRYIDWRLMTRFLPGAILGIVLGSLLLVSLSPAVIYL 117

Query: 129 AFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
             AIF L +             +    +    I   VT F++  +G  G +    +   +
Sbjct: 118 TIAIFILYLCW------GPKLPKLILGSLGTGIAAAVTSFITLFVGASGPLVGAFIKQLH 171

Query: 189 GASIYKATATSAGVS----ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
                     +A +S      I+           W              +  ++ ++   
Sbjct: 172 TCKFTTVATFAAAMSCQHLLKISVFHQAGFPLLEW--------------LPLLVCMILSG 217

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            + T +  ++   I  K   + F++I+   +   
Sbjct: 218 AIGTFIGLRILQYISDKSFELTFNLILTALALRM 251


>gi|78043623|ref|YP_361032.1| sensor histidine kinase [Carboxydothermus hydrogenoformans Z-2901]
 gi|77995738|gb|ABB14637.1| sensor histidine kinase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 552

 Score = 39.3 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 16/111 (14%)

Query: 162 WGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA--FPALLVRIYSGW 219
            G++ GF  G  G+ G         ++G  I  A A S  V   IA         + +G 
Sbjct: 42  LGLILGF--GLFGIIG--------TYWGIPIKGAIANSRVVGPAIAGIIGGPAAGLLAGL 91

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
                  W  GF    AV   +  ++        L+    +K   + F ++
Sbjct: 92  IAGVHRAWLGGF---TAVACGISTTVEGLIAGV-LARRFPEKRFNVVFGIL 138


>gi|149372092|ref|ZP_01891362.1| hypothetical protein SCB49_00190 [unidentified eubacterium SCB49]
 gi|149354859|gb|EDM43421.1| hypothetical protein SCB49_00190 [unidentified eubacterium SCB49]
          Length = 127

 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 13/131 (9%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI-A 79
             I  +IV   ++G LSG  GVGGG+VMVP+                H A G SL V+  
Sbjct: 4   TIIVSLIVIGLIAGILSGFMGVGGGVVMVPLAVLFL-------GYSQHQAQGLSLAVLAV 56

Query: 80  PTSVMSFMEHR-----RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           P + ++   +           + K          +  ++ S     + ++ L K+FA+  
Sbjct: 57  PVTFLAAYTYYVNPLEGQEPFSWKFGIIIALSFVVGGLIGSKFAVSIPENVLKKSFAVIL 116

Query: 135 LLMGILMLKRD 145
           L+  + M    
Sbjct: 117 LIAAVKMFFTK 127


>gi|134097805|ref|YP_001103466.1| hypothetical protein SACE_1215 [Saccharopolyspora erythraea NRRL
           2338]
 gi|291005559|ref|ZP_06563532.1| hypothetical protein SeryN2_13647 [Saccharopolyspora erythraea NRRL
           2338]
 gi|133910428|emb|CAM00541.1| protein of unknown function DUF81 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 255

 Score = 38.9 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 89/249 (35%), Gaps = 28/249 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++V  FLSG ++ + G GG L++ P L            +   VA  T+     P  V
Sbjct: 9   AVLVVVGFLSGAINAVAG-GGSLLVFPALLA--------TGMTPLVANVTNSVAQGPGFV 59

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + +  R     N   +        + +V+  +++  +  S  +    +   L  +LM  
Sbjct: 60  GAALSQREDLGGNRLRVVTTSIAAAVGSVLGCVLLMVLPGSVFDAVVPVLVGLSALLMAF 119

Query: 144 RDRLY-----CERKFPDNYVKYIWGMVTGFLSG--ALGVGGGIFTNLLMLFYGASIYKAT 196
           ++ +       +   PD       G+    + G    G    IF  +L+L    ++ +  
Sbjct: 120 QNTIRKWLGNPDPTAPDRTTMLTVGIFFASIYGGYFGGARSVIFIAILVLAANDTMRRLN 179

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
           A  + +       + +  +                V+  AVL++ P ++L   +  KL+ 
Sbjct: 180 ALKSWLGL---IGSAVTFVVYALIAP---------VDWVAVLMLAPTTVLGGWVGGKLAQ 227

Query: 257 MIGKKYLTI 265
            I    L  
Sbjct: 228 RIPATLLRY 236


>gi|219667736|ref|YP_002458171.1| hypothetical protein Dhaf_1689 [Desulfitobacterium hafniense DCB-2]
 gi|219537996|gb|ACL19735.1| protein of unknown function DUF81 [Desulfitobacterium hafniense
           DCB-2]
          Length = 252

 Score = 38.9 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 91/272 (33%), Gaps = 25/272 (9%)

Query: 6   YNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSI 65
           Y   ++       +V  +   +V    +G    L      ++++PVL+  F        +
Sbjct: 3   YVLHMLDLTGIQGMVVMLTAFLVGFSKTGVSGVL------MLVIPVLATVFGGKDSTGVL 56

Query: 66  CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
              + +G          + +   +RR  +I+ K +   +    I   + +++   +    
Sbjct: 57  LPLLLVG---------DIFAVWSYRR--SIDWKKVLAPLPWALIGLFLGAVVGRVIADQV 105

Query: 126 LNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
                    L    +++  +++      P     YI   +    +  +G   G   ++ +
Sbjct: 106 FVILIGTIILFCLGILVYTEKMGKNFTVPTGTWFYITAGILSGFATMIGNAAGPIFSVYL 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           L  G        T+A    +I    + V++++ W    L  + L         +++P+  
Sbjct: 166 LALGLHKNDFMGTNALFFFIINSIKVPVQVFA-WHNMELQSFIL-------AGVMVPMVA 217

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L   L   +   I +++       +   ++  
Sbjct: 218 LGAALGLWVIKKINERFFRYLIICMTALSALR 249


>gi|158320810|ref|YP_001513317.1| hypothetical protein Clos_1781 [Alkaliphilus oremlandii OhILAs]
 gi|158141009|gb|ABW19321.1| conserved hypothetical protein [Alkaliphilus oremlandii OhILAs]
          Length = 119

 Score = 38.9 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 29/66 (43%)

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           L    P ++++   H R G I  K+    I    + T++ S +   +    L K F  F 
Sbjct: 44  LISFVPVAIVALFVHFRKGNIVSKLSIPLIGSGILGTIIGSKLALKLSSVILRKWFGGFL 103

Query: 135 LLMGIL 140
           L++G+ 
Sbjct: 104 LVIGLY 109


>gi|307942593|ref|ZP_07657941.1| permease [Roseibium sp. TrichSKD4]
 gi|307774232|gb|EFO33445.1| permease [Roseibium sp. TrichSKD4]
          Length = 186

 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 57/168 (33%), Gaps = 21/168 (12%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  +++V SF +  L+   G+GGG+ ++ +++       +                +   
Sbjct: 17  FALILLVPSFFTSALTAALGLGGGIALITIMASVMPTAALVPVHG-----------VVQI 65

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              +     +   ++  I   +     +  +    +   + ++ L     +F L      
Sbjct: 66  GSNAGRALVQIRHVDWMIALWFAGGAILGALAGGAIAIQLPETLLKAGIGLFVLWTVWGK 125

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALG----VGGGIFTNLLM 185
             R +    +         I G ++ FLS   G    +GG + ++  +
Sbjct: 126 APRFQKAARKAM------GIAGFISTFLSMFFGAAGPIGGAVLSHPRL 167


>gi|282857167|ref|ZP_06266411.1| conserved domain protein [Pyramidobacter piscolens W5455]
 gi|282584953|gb|EFB90277.1| conserved domain protein [Pyramidobacter piscolens W5455]
          Length = 241

 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 12/121 (9%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
             A  L+G LSGLF VGG     P+          +D+        T       T+ ++ 
Sbjct: 130 AAAGTLAGVLSGLFAVGGP----PIALYMLAATDTNDAYR-----ATLSAQFCITACVTT 180

Query: 87  MEHRRHGTIN---MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
               R G      + +    +  L I   +   +   +D   L      + ++ GILML 
Sbjct: 181 FARWRSGAFTAATIHVYVLMLASLLIGAWIGGKIFHRLDPKRLRLIVYGYLIVSGILMLF 240

Query: 144 R 144
           +
Sbjct: 241 K 241


>gi|126734832|ref|ZP_01750578.1| hypothetical protein RCCS2_13184 [Roseobacter sp. CCS2]
 gi|126715387|gb|EBA12252.1| hypothetical protein RCCS2_13184 [Roseobacter sp. CCS2]
          Length = 251

 Score = 38.9 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 78/258 (30%), Gaps = 21/258 (8%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
            +    I A    G   G FG G   V   +L+           +   VA+G  L +   
Sbjct: 7   QFFAAGIPAIIFGGISKGGFGSGAAFVAGAILALV---------VPPSVALGIVLPLFML 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL-LMGI 139
               +   +   G  +    K  +       ++ + + + VD         + CL  +  
Sbjct: 58  VDAATLKPYW--GKWHWPSAKGLMLGAIPGCIIAAWLYTIVDADVFRLLIGVICLAFVAF 115

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
              +       ++ P +     +       +  +   GG    + +L  G S     AT+
Sbjct: 116 QWSRAMGWLTVKQMPFSAPLARFAGTVSGFTSFVSHAGGPPAAVFLLSQGLSKTAYQATT 175

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
                 I +   +   + G         SL         ++ P ++L   +  K  +++ 
Sbjct: 176 VVTFWAINWMKAVPYAFLGIFSWDTIMGSL---------VLAPFALLGAWIGLKAHHLVP 226

Query: 260 KKYLTIGFSMIMFTTSFV 277
           ++       +++  T   
Sbjct: 227 ERLFFGITYVLLVFTGVR 244


>gi|262373776|ref|ZP_06067054.1| thiol:disulfide interchange protein [Acinetobacter junii SH205]
 gi|262311529|gb|EEY92615.1| thiol:disulfide interchange protein [Acinetobacter junii SH205]
          Length = 612

 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 68/223 (30%), Gaps = 61/223 (27%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD---KSFLN-----KAF 130
             TS++   EH   G     I   ++  + +   V  L+ S      + +L       AF
Sbjct: 236 ILTSLI-VREH--KGVKAWMIALTFVISMAMVYAVLGLIASAAGLNFQRWLQQPATLIAF 292

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYI--------WGMVTGFLSGALGVGGGIFTN 182
           ++  ++  + +        E K P  +V ++         G + G  +  +G+   +   
Sbjct: 293 SLLFVVFALNLFG----LFEIKLPQKWVNHLDRMQSVQQGGTLIG--ASVMGMISALLVG 346

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL--NGLPPWSLGFVNIGAVLII 240
             M                          L+ I          L  ++LGF        +
Sbjct: 347 PCMTA-------------------PLAGTLLFISQTQNQWQGALLLFTLGF-------GM 380

Query: 241 LPISILITPLATKLSYMIGKK-----YLTIGFSMIMFTTSFVF 278
               +L + L  K    + K       + + F+ +M   S  F
Sbjct: 381 GIPLLLASVLGAK---ALPKAGEWMHQIKVIFAFLMLALSLYF 420


>gi|78046287|ref|YP_362462.1| hypothetical protein XCV0731 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78034717|emb|CAJ22362.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 270

 Score = 38.9 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 91/259 (35%), Gaps = 30/259 (11%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            L  +  V  + +++    L+G + G+ G+G     +P ++     + +  S    + + 
Sbjct: 21  LLPMNEDVSQLIMVVAVFLLAGAVKGVAGMG-----LPTVAMGLLGLWLPPSQAAALLVL 75

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV----DKSFLNK 128
            SL              +  G    ++L+    VL +  V  + + + +       +L  
Sbjct: 76  PSLVTNL---------QQAWGPAATELLRRLWPVLAM-VVAGTWLSAGLMIGGHPRYLRG 125

Query: 129 AFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           A  +  +   +L L R +     +  + +   + G+V G LSGA GV   +     +   
Sbjct: 126 ALGVLLVAYALLGLARRQWTLPPRH-ERWGSPLIGLVGGLLSGATGVL-VLPVVPYLSAL 183

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
           G          A           +  ++ G       P S G   + ++L +LP + L  
Sbjct: 184 GLPREVLIRALAACFGTATLALAIALVWHG-----GVPLSAG---LPSLLALLPTA-LGV 234

Query: 249 PLATKLSYMIGKKYLTIGF 267
              TKL   I  +     F
Sbjct: 235 WAGTKLRRRISPEAFRRIF 253


>gi|227325809|ref|ZP_03829833.1| permease [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 253

 Score = 38.9 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 55/182 (30%), Gaps = 16/182 (8%)

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
           I   +   ++    I   V + +   +  +    A A+F L                  P
Sbjct: 75  IVWPLALWFLIGSVIGIAVGAPIAVWIPDNVAKIALALFILWSVFR-------KRTAPKP 127

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
            N + +I G     L   +    G     L+   G +     AT A    L     +L  
Sbjct: 128 VNRLFFILGGALTSLGTMIVGATGPMVAGLISSQGLTKQPLIATHALCMVLQHGLKILAF 187

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTT 274
              G+  +           +  +  ++   +L T L T+L   + +K     F + M   
Sbjct: 188 GLMGFAYHD---------WLPMLAAMIASGVLGTWLGTRLLDNLPEKLFRTTFRLTMLIL 238

Query: 275 SF 276
           S 
Sbjct: 239 SA 240


>gi|37679699|ref|NP_934308.1| permease [Vibrio vulnificus YJ016]
 gi|37198444|dbj|BAC94279.1| predicted permease [Vibrio vulnificus YJ016]
          Length = 252

 Score = 38.9 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 75/208 (36%), Gaps = 24/208 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L+  A F  G L+ + G GG  +  P L       GI       VA  T+        
Sbjct: 3   IILLFFAGFFGGMLNSIAG-GGSFITFPALMAV----GIPPV----VANATNTFASCAGY 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +     +RR       IL   I    +  ++ + ++ +  +S   KA     L   IL +
Sbjct: 54  ISGAWGYRRELYAQKNILLKTIVCSLLGGMLGAFLLLNTSESDFLKAIPWLLLFATILFV 113

Query: 143 KRDRLYCE--------RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
              R+           +     ++  ++ ++     G    G GI T   +   G   ++
Sbjct: 114 FGGRINQAIGHRADRPKHPIILWLPALFLVLVSAYGGFFNAGLGIVTLSYLTLSG---HR 170

Query: 195 ATATSAGVSALI----AFPALLVRIYSG 218
              T  G+  LI    +  A+++ I++G
Sbjct: 171 DIITMNGLKLLISTSVSLIAVVIFIFNG 198


>gi|85711903|ref|ZP_01042958.1| Predicted permease [Idiomarina baltica OS145]
 gi|85694300|gb|EAQ32243.1| Predicted permease [Idiomarina baltica OS145]
          Length = 241

 Score = 38.9 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 63/184 (34%), Gaps = 16/184 (8%)

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
            I+ + +  ++    + T++ SL++  + + +L  + A F L +             +  
Sbjct: 68  HIDWRTVIWFVPFGLVGTLLGSLVLLQLPQHWLQLSIAGFLLFLTW------GPQLPKLI 121

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
                  +   + GF+S  +G  G +  + +   +    +   AT A +  +   P  +V
Sbjct: 122 LGRVGLALGAALCGFISLFVGASGPVVASFVKARFDHR-HTVVATFAAIMTMQHAPKAIV 180

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
               G+                 ++ ++    L T +  +    +  ++    F  ++  
Sbjct: 181 FGAQGFVFEQ---------WWLLIMCMIAAGFLGTYMGVRWLKRMTNQHFDQLFKWVITL 231

Query: 274 TSFV 277
            +  
Sbjct: 232 LALR 235


>gi|294944337|ref|XP_002784205.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239897239|gb|EER16001.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 392

 Score = 38.9 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 38/87 (43%)

Query: 165 VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
             GFL+  +G+ GGI    L++F G +  +A+ T + V  + +    L     G+  +  
Sbjct: 261 GIGFLAAVVGISGGIIITPLVMFTGLTPPQASGTGSVVILVNSSSLALSFGLGGYLPDAS 320

Query: 225 PPWSLGFVNIGAVLIILPISILITPLA 251
             W +     GA+   + ++ ++    
Sbjct: 321 ALWIIALPFCGALTGDIILTRIMRRTG 347


>gi|83648977|ref|YP_437412.1| permease [Hahella chejuensis KCTC 2396]
 gi|83637020|gb|ABC32987.1| predicted Permease [Hahella chejuensis KCTC 2396]
          Length = 263

 Score = 38.9 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 92/264 (34%), Gaps = 33/264 (12%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++ + S ++  LS L G G G               +   +   VA+ T         
Sbjct: 3   FIMLFIISLIANGLSALAGGGSG--------LLQLPALLFLGLSFSVALATHKVASVALG 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           V +   H R   ++ +     +       ++ + +I  VD +    A  +    +G+  +
Sbjct: 55  VGASFRHLREKGLDWRFALFILAAGIPGVLLGAQVILGVDDNAAQMALGLLTTGLGVYSM 114

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG---------GIFTNLLML-FYGASI 192
           +  +L  +    +   +   G +TG L G  G+GG         G+F  L ++ ++G S 
Sbjct: 115 RSPQLGLQESSKN---RSALGYITGAL-GLFGIGGLNGSITSGTGLFVTLWLIVWFGLSY 170

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
             A A +  +         +   ++G G   L   +   V    ++ ++  ++    L  
Sbjct: 171 QGAVAYTLVL---------VGVFWNGAGALSLALQTE--VRWDWLIPLILGALAGGYLGA 219

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSF 276
             S   G   +   F ++     F
Sbjct: 220 HWSIAKGSAMVKRAFEVLTILVGF 243


>gi|299134723|ref|ZP_07027915.1| protein of unknown function DUF81 [Afipia sp. 1NLS2]
 gi|298590533|gb|EFI50736.1| protein of unknown function DUF81 [Afipia sp. 1NLS2]
          Length = 242

 Score = 38.9 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 73/197 (37%), Gaps = 17/197 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+++   ++G  SG+ G G  +++VPVL+  +       +    +A+   +      +
Sbjct: 3   LILVLIVGLVAGIFSGIVGTGSSIMLVPVLATIYG----PKAAVPIMAVAAVMA-----N 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               +   R  T++ +    +         + +  +  +    ++    +F     I M+
Sbjct: 54  FSRILAWWR--TVDWRAFAAYSITGGPAAFLGAQTLLILPNRAVDLTIGLFL----ISMI 107

Query: 143 KRDRLYCERKFPDNYV-KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
                   R          I G V GFL+G + V  G  +  + L YG       AT A 
Sbjct: 108 PIRHWLASRMIRLKLWHMAIAGAVVGFLTGIV-VSTGPISVPVFLGYGLVKGAFLATEAA 166

Query: 202 VSALIAFPALLVRIYSG 218
            S +I    +L    SG
Sbjct: 167 SSLVIYVVKVLTFQTSG 183


>gi|227876837|ref|ZP_03994946.1| protein of hypothetical function DUF81 [Mobiluncus mulieris ATCC
           35243]
 gi|306817780|ref|ZP_07451521.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|227842734|gb|EEJ52934.1| protein of hypothetical function DUF81 [Mobiluncus mulieris ATCC
           35243]
 gi|304649429|gb|EFM46713.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
          Length = 306

 Score = 38.9 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 52/145 (35%), Gaps = 7/145 (4%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + L +V     G + G  G GGG++ VP L               H A   SL ++ 
Sbjct: 1   MESLLLALVIGLGVGCIVGALGAGGGILSVPALVYLL-------GQNPHAAGAGSLIIVG 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            T+++S +       +  K    +     + T + S +   V    L   F +  +++G+
Sbjct: 54  ATALISLIPRTWEHRVRWKDGLIFGLCSTLATFLGSRLSFWVSGWVLMLLFGVLLVMVGM 113

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGM 164
           +ML +           +        
Sbjct: 114 VMLWKAWQSARTAQRGSSGNGAAAT 138


>gi|83950438|ref|ZP_00959171.1| membrane protein, putative [Roseovarius nubinhibens ISM]
 gi|83838337|gb|EAP77633.1| membrane protein, putative [Roseovarius nubinhibens ISM]
          Length = 248

 Score = 38.9 bits (90), Expect = 0.80,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 80/257 (31%), Gaps = 22/257 (8%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + +   A+  +G   G FG G   V   VL+           +    A+   L ++  
Sbjct: 7   EVMAVGAGAALFAGISKGGFGSGAAFVGAAVLALF---------VSPGAALAIMLPLLLA 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
               S   + R    +  + +  +       ++ +L+    D         + CL     
Sbjct: 58  IDAASLRAYWRQW--DWALARHLLLASVPGVLLGALVYRVADADLFRLIIGVICLGFVAW 115

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
            L   R    R  P  +  +    + GF S  +   GG    +++L  G +     AT+ 
Sbjct: 116 RLWPRRDAARRDLP-PWAVWALAGLAGFTS-YVSHAGGPAVAVVLLARGVTKTVFQATTV 173

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            V  L+      +    G          L          +LP ++  T +     + I +
Sbjct: 174 LVFGLMNLLKFALYAGQGMFSPATLWLDL---------WLLPFALAGTWIGVMAHHRIPE 224

Query: 261 KYLTIGFSMIMFTTSFV 277
           ++       ++  T   
Sbjct: 225 RWFFGLTYGLLIVTGLR 241


>gi|299823020|ref|ZP_07054906.1| possible Rhomboid protease [Listeria grayi DSM 20601]
 gi|299816549|gb|EFI83787.1| possible Rhomboid protease [Listeria grayi DSM 20601]
          Length = 512

 Score = 38.9 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 30/171 (17%)

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWI----------FVLPITTVVTSLMI----SHVDK 123
           I P  + +   H     + + I+  W            +L I     +L      +H+  
Sbjct: 231 ITPMFLHNGWMHIAANAVMLYIVGPWAEKIYGKWRFALILLIGGFAGNLASFVLNNHLSV 290

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSG---ALG-VG--- 176
                 FA+F  L+  L++ +  LY +    +     +  ++ G  S     +G +G   
Sbjct: 291 GASTSVFAVFGALL-YLVVLKPNLYAKTIGTNVATLVVVNILIGLFSAEIDMMGHIGGLV 349

Query: 177 GGIFTNLLMLFYG--ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLP 225
           GG      +       +  +A   S     LI        +Y+G+     P
Sbjct: 350 GGFLIAGSISLPNQYFNWKRAL-YSLSSLVLIGL-----FLYAGYQNGTKP 394


>gi|119476458|ref|ZP_01616809.1| hypothetical protein GP2143_08404 [marine gamma proteobacterium
           HTCC2143]
 gi|119450322|gb|EAW31557.1| hypothetical protein GP2143_08404 [marine gamma proteobacterium
           HTCC2143]
          Length = 252

 Score = 38.9 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 64/175 (36%), Gaps = 15/175 (8%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  V +  L++    ++G ++ L G GG  + +P L       G+       +A  T+  
Sbjct: 2   DITVAHAFLLLATGLVAGVINTLAG-GGSNLTLPALMIL----GMPAD----IANATNRV 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +   +V++ +   ++  + +  +   +    I  +V ++  S      L        + 
Sbjct: 53  GVVLQTVVATLGFHKYDKLPVDDIGPVLLPTLIGGLVGAVAASFAPTGLLKPLLLGAMVT 112

Query: 137 MGILMLKRDRLYCERK------FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
           M ++ML +  L             D    + W +V GF  G +  G G      +
Sbjct: 113 MTVVMLVKPSLVSPPAGTVPFRVKDRPAAWWWLLVAGFYGGFVQAGVGFILIAAL 167


>gi|253996379|ref|YP_003048443.1| hypothetical protein Mmol_1007 [Methylotenera mobilis JLW8]
 gi|253983058|gb|ACT47916.1| protein of unknown function DUF81 [Methylotenera mobilis JLW8]
          Length = 264

 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 85/255 (33%), Gaps = 42/255 (16%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR-HGTINMKILKDWIF 105
           +M P+L   F            VA+GT L   A T       H   H +++ +++     
Sbjct: 26  LMTPLLVFLFGF-------KATVAVGTDLLYAAITKTGGVFVHHNTHKSVDWRVVGWMAT 78

Query: 106 VLPITTVVTSLMISHVD------KSFLNKAFAIFCLLMGILMLKRDRLYCER-------- 151
               + V+T  +I H+          +     +  +L  + ++ R  L  ++        
Sbjct: 79  GSLPSAVITIFVIKHLIQIEKDISGIITHTLGVALILTAVALIIRSYLTRKKMREIEDTI 138

Query: 152 ------KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY--GASIYKATATSAGVS 203
                            G++ G L     VG G+   L +LF     S  K   T    +
Sbjct: 139 ISSGRFDKIQIPATIFTGIILGALVTISSVGAGVLGTLALLFLYPKMSTLKVVGTDLAHA 198

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
             +              + G   W+LG VN   +  +L  S+    + + LS  I +K L
Sbjct: 199 IPLT------------AVAGFGHWTLGHVNFELLGTLLIGSLPGIWVGSHLSVKIPEKTL 246

Query: 264 TIGFSMIMFTTSFVF 278
            +  + ++      F
Sbjct: 247 RLILATLLLVIGLKF 261


>gi|239909028|ref|YP_002955770.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
 gi|239798895|dbj|BAH77884.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
          Length = 313

 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 14/119 (11%), Positives = 36/119 (30%), Gaps = 9/119 (7%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V +F     + + GV G  +++P             S        T+             
Sbjct: 17  VVAFAISFFTSMGGVSGAFLLLPFQMSFLGYAHPSVS-------ATNQLFNIVAIPSGVY 69

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLM-ISHVD-KSFLNKAFAIFCLLMGILMLKR 144
            + + G +   +    I       ++ +++ ++ +           +  L +G  M+K 
Sbjct: 70  RYVKEGRMVWPLTWMVIVGTLPGVLIGAVVRVAWLPDPRDFKLFVGLVMLYIGARMVKS 128


>gi|256829864|ref|YP_003158592.1| hypothetical protein Dbac_2091 [Desulfomicrobium baculatum DSM
           4028]
 gi|256579040|gb|ACU90176.1| protein of unknown function DUF81 [Desulfomicrobium baculatum DSM
           4028]
          Length = 305

 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 50/146 (34%), Gaps = 9/146 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +A+F+    + + GV G  +++P             S        T+             
Sbjct: 17  LAAFVVSFFTSMGGVSGAFLLLPFQMSFLGYTAPSVS-------ATNQLFNIVAIPSGVY 69

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLM-ISHVDKSFLNKAFAIFCL-LMGILMLKRD 145
            + +   +   +    +       ++ +++ +S++      K FA   L  +G  M++  
Sbjct: 70  RYLKEKRMVWPLTWVVVVGTLPGVLLGAVIRVSYLPDPKNFKVFAGLVLAYIGFRMIRDL 129

Query: 146 RLYCERKFPDNYVKYIWGMVTGFLSG 171
             + E+K    + + +     G  +G
Sbjct: 130 LKHKEKKSESTFRQSVKDSRGGAAAG 155


>gi|332295654|ref|YP_004437577.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
 gi|332178757|gb|AEE14446.1| protein of unknown function DUF81 [Thermodesulfobium narugense DSM
           14796]
          Length = 270

 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 75/205 (36%), Gaps = 19/205 (9%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A G SL  I  +++       R  TIN K+    I ++    ++ S+    V+     + 
Sbjct: 50  ASGLSLFTIVISTIGGTFAFIRQKTINYKLFTTIISLIIPGVIIGSIANKFVNTQEFKEI 109

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPD--------NYVKYIWGMVTGFLSGALGVGGGIFT 181
             ++ + +GI  L   + +  +   D        + +  I   ++GF+SG  GVG G   
Sbjct: 110 LPLWVITIGIFSLVTAKKHPLKNMKDSENDSIKHSKLTKIVSFISGFVSGFFGVGIGGVM 169

Query: 182 NLLMLFY-GASIYKATATSAGVSALIAFPALLV-RIYSGWGLNGLPPWSLGFVNIGAVLI 239
              ++     S   A +T   V  + +     V    +G  L+           I  ++ 
Sbjct: 170 GTYLVAVEQISARIAFSTLVMVMTITSLFGFFVHFESAGLNLSS---------WIAYLIP 220

Query: 240 ILPISILITPLATKLSYMIGKKYLT 264
           +   +I  + +   +S     K L 
Sbjct: 221 LTLGAIFGSQIGAYISKTSNTKTLR 245


>gi|269216608|ref|ZP_06160462.1| putative membrane protein [Slackia exigua ATCC 700122]
 gi|269130137|gb|EEZ61219.1| putative membrane protein [Slackia exigua ATCC 700122]
          Length = 252

 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 68/208 (32%), Gaps = 15/208 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++    FL+G +  + G GG                +   +  H A+ T+       +
Sbjct: 6   LIIVCPLVFLAGVVDAIAGGGG---------LVSLTAYLLAGLPAHTAIATNKLSSTVGT 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             +     R G + +K     +      + + + +              +   L+ I +L
Sbjct: 57  AAATFRFMRGGFVKLKPAIPAVIGALAGSAIGARLALLTPDGIFQIVLIVSLPLVAIAVL 116

Query: 143 KRDRLYCERK-----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG-ASIYKAT 196
           ++  L   +           V     +  G   G  G G G F  L  + +G   I +A+
Sbjct: 117 RKPDLGASKAEDVPLHRRLAVILAISLTVGVYDGFYGPGTGTFMLLAFVVFGKLGIKEAS 176

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGL 224
             +   +      AL+  +++G    GL
Sbjct: 177 GETKIANLASNVAALITFLHAGVVWIGL 204


>gi|220916634|ref|YP_002491938.1| protein of unknown function DUF81 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219954488|gb|ACL64872.1| protein of unknown function DUF81 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 247

 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 78/259 (30%), Gaps = 24/259 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+  AS  +G ++ + G GG L+  P L  A         +    A  TS   + P  +
Sbjct: 7   VLVTAASAAAGLVNAVAG-GGTLLTFPALLLA--------GLSPVTANATSTVALWPGQI 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL----LMGI 139
            S   +RRH                +   + S+++  + +           L    L+ +
Sbjct: 58  SSVWAYRRHIDEERHRAIVLGLPALLGGALGSVLLLALPEKAFAAVVPWLILFACALLAL 117

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
               R  +  +         +I   +     G  G G GI            +  A    
Sbjct: 118 QGPIRRAVGHQVAGNHPVALWIIQFLISVYGGYFGAGIGIL-----------MLAAMGIL 166

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
              S   A    ++      G+  +   + G V+     ++   S++   +   ++  + 
Sbjct: 167 LPSSLQHANALKVLFALLTNGVACVLFLAWGKVDPPLAALMAVASLVGGWVGAHVAQRLP 226

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              +      I    +  F
Sbjct: 227 PAGMKAFAIAIGLFAAAKF 245


>gi|198284089|ref|YP_002220410.1| hypothetical protein Lferr_1986 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|198248610|gb|ACH84203.1| protein of unknown function DUF81 [Acidithiobacillus ferrooxidans
           ATCC 53993]
          Length = 251

 Score = 38.9 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 66/210 (31%), Gaps = 19/210 (9%)

Query: 10  LMVFLSKDCVVDYICLIIVAS---FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
           +   LS   ++    L  +A     ++  +  + G G GL+ V +L+  F +  +   + 
Sbjct: 1   MHASLSYATLIQNPLLWAIAGVIILVAFYVRAVIGFGSGLISVALLTLIFPIKEVVPVVL 60

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +                   +       +    L+  I    I     S +++  +   L
Sbjct: 61  L-----------LDLLGSVLLGAYDFREMRWPELRWLIPGSLIGLAFGSFILADTNAQNL 109

Query: 127 NKAFAIFCL-LMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
            +   +F L  +   +L +     +   P      I+G V G L G    GGG      +
Sbjct: 110 TRFLGVFILAYVCYALLMKPERLPQVALPWGMPLGIFGGVVGSLYG----GGGPPIVAYL 165

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRI 215
                      AT  G++         + I
Sbjct: 166 QMRHLDKRAFRATFQGIALTDNILRAFMYI 195


>gi|162146468|ref|YP_001600927.1| hypothetical protein GDI_0644 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161785043|emb|CAP54587.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 268

 Score = 38.9 bits (90), Expect = 0.84,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 47/119 (39%), Gaps = 6/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + G L  L  VG G + V  L   +  +     +   +A         P ++
Sbjct: 156 ILTVLVGAVLGLLVSLSSVGAGAIGVTALLVLYPRLSTAQIVAADIAHA------VPLTL 209

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++ + H   G++N  +L   +       V+ SL + ++ +S      A    ++G  ++
Sbjct: 210 VAGLGHWLLGSVNPAMLVSLLMGSIPGIVLGSLFVGYIRESIQRAVLATILTIVGARLI 268


>gi|227497301|ref|ZP_03927533.1| integral membrane protein [Actinomyces urogenitalis DSM 15434]
 gi|226833172|gb|EEH65555.1| integral membrane protein [Actinomyces urogenitalis DSM 15434]
          Length = 245

 Score = 38.9 bits (90), Expect = 0.85,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 51/148 (34%), Gaps = 3/148 (2%)

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
               +    + GT L ++    V++   +RR    +   L+  +  +    V+ +  +  
Sbjct: 38  FAAVLPAKASTGTMLVLLLVGDVLAIWMYRR--DADWPTLRRLVPGVLAGVVLGAAFLHV 95

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF 180
                  +   +  L +  + L   RL    +      + ++G + GF +      GG  
Sbjct: 96  ASDGATQRFIGVLLLALIAVTLLLMRLPRPPQVQGRAGRAVYGTLAGF-TTMAANAGGPV 154

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAF 208
           T +  L    SI     T+A    L+  
Sbjct: 155 TTMYFLASRFSISTFLGTTAWFFFLVNL 182


>gi|126643172|ref|YP_001086156.1| hypothetical protein A1S_3157 [Acinetobacter baumannii ATCC 17978]
 gi|126389056|gb|ABO13554.1| putative membrane protein [Acinetobacter baumannii ATCC 17978]
          Length = 109

 Score = 38.9 bits (90), Expect = 0.86,   Method: Composition-based stats.
 Identities = 10/84 (11%), Positives = 30/84 (35%)

Query: 63  DSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
            ++     +GT+       +  +     +   +  K+L        I++   +  +S + 
Sbjct: 5   PNMSTATVIGTNKVSSIFGTASAAYTFAKKVKLQWKLLAVIAICALISSFAGAACLSLIP 64

Query: 123 KSFLNKAFAIFCLLMGILMLKRDR 146
           +S L     +  +++ I  L +  
Sbjct: 65  QSVLRPFVFVMLIVIAIYTLVKKN 88


>gi|328954030|ref|YP_004371364.1| protein of unknown function DUF81 [Desulfobacca acetoxidans DSM
           11109]
 gi|328454354|gb|AEB10183.1| protein of unknown function DUF81 [Desulfobacca acetoxidans DSM
           11109]
          Length = 335

 Score = 38.9 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 7/84 (8%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           G +GVGGG +M P L+  F       +I  +VA+GT L  +  T+ M+ +   R G ++ 
Sbjct: 58  GFYGVGGGFLMAPWLNLMF-------NIPYNVAVGTDLTQMVGTATMAKIRLGRSGYVDF 110

Query: 98  KILKDWIFVLPITTVVTSLMISHV 121
           K+             + + ++  +
Sbjct: 111 KLGTLMFSGSIFGVEIGARLVELL 134



 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 34/99 (34%), Gaps = 7/99 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            + +P L            +   V++GT+L  +  TS    + H   G + + ++   + 
Sbjct: 241 FIRMPALIYVL-------GVPTVVSIGTNLFELLLTSFYGALTHSLKGNVELILVIILLV 293

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              + + + +             AFA+   L    M  +
Sbjct: 294 SGTVGSQLGAAWQRQWATPKWQLAFAVVIFLTIGCMALK 332


>gi|91203043|emb|CAJ72682.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 238

 Score = 38.9 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 68/195 (34%), Gaps = 15/195 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            LI+ ++ ++  ++ + G GGG++++PVL   F +        +   +G +L  +     
Sbjct: 5   LLILSSALIASVVAAIAGTGGGIILLPVLVAIFGVRDAVPMYAVAQLVG-NLSRVGFN-- 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                      I + ++  ++      +++ + + + +  + L +    F +   I    
Sbjct: 62  --------RRFIQLPVVFWFVAGAIPFSILGAWLFTKLPDTGLLRILGGFLICSVIWRHW 113

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
           R RL         +     G +   +S   G  G       + +          T A  +
Sbjct: 114 RGRLITGF---RPHWFAPIGSMFSLVSAISGSAGPFLAPFYLSYGLIKGAF-IGTEALGT 169

Query: 204 ALIAFPALLVRIYSG 218
           A I    L+     G
Sbjct: 170 AAIHVVKLVSYQSFG 184


>gi|307596176|ref|YP_003902493.1| hypothetical protein Vdis_2072 [Vulcanisaeta distributa DSM 14429]
 gi|307551377|gb|ADN51442.1| protein of unknown function DUF81 [Vulcanisaeta distributa DSM
           14429]
          Length = 316

 Score = 38.9 bits (90), Expect = 0.90,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 7/115 (6%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
            G +SG+FGVG G  +VPV +    L        + VA  TS  +IA     +   +   
Sbjct: 202 VGLVSGMFGVGAGWAIVPVYNLVMYL-------PLKVAAATSKVLIAIGDTGALWVYINS 254

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
           G +    L   +  + + T +   ++       +        L+    + ++   
Sbjct: 255 GALVFPFLVPCVVGMVLGTEIGVRVMPKAKIPIIRWVIIAVMLVTSARLFQQSIP 309


>gi|225010825|ref|ZP_03701293.1| protein of unknown function DUF81 [Flavobacteria bacterium
           MS024-3C]
 gi|225005033|gb|EEG42987.1| protein of unknown function DUF81 [Flavobacteria bacterium
           MS024-3C]
          Length = 252

 Score = 38.5 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 8/109 (7%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GG L+ +PVL       G+  S    VA GT+   I   + +     +  G         
Sbjct: 26  GGSLLSLPVLIFL----GLPPS----VANGTNRVAIVIQTALGTAGFKSKGVSTYPFNMY 77

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
                 I +++ + +   +     NK  AI  + + +++L + ++  + 
Sbjct: 78  LAVTAFIGSIIGANIAVDIKGETFNKILAIIMVAVVLIILFKPKMNTKD 126


>gi|111221075|ref|YP_711869.1| membrane protein [Frankia alni ACN14a]
 gi|111148607|emb|CAJ60280.1| Membrane protein, putative (partial match) [Frankia alni ACN14a]
          Length = 385

 Score = 38.5 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D   LI +A F+ G + G+ G+GGG +M PVL   F +  +        A+ + L   A
Sbjct: 1   MDLDPLITLAGFVVGAVVGMTGMGGGALMTPVLVLVFGVHPLA-------AVSSDLVASA 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-----DKSFLNKAFAIFC 134
               +    H R GT++  ++               L++  +      +  +  A     
Sbjct: 54  VMKPVGATVHLRRGTVHRGLVGWLCLGSVPAAFSGVLVLRALGDSDAVQERIKVAMGALL 113

Query: 135 LLMGILMLKRDRLYCERKF---------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
           +L    ML +  +   R           P      + G + G + G   VG G    +L+
Sbjct: 114 VLAAAGMLAKSLVDRGRPPAPAGEVVIRPRPLPTVLIGAIGGLVVGLTSVGSGSLIVVLL 173

Query: 186 L 186
           L
Sbjct: 174 L 174


>gi|109899288|ref|YP_662543.1| hypothetical protein Patl_2981 [Pseudoalteromonas atlantica T6c]
 gi|109701569|gb|ABG41489.1| protein of unknown function DUF81 [Pseudoalteromonas atlantica T6c]
          Length = 250

 Score = 38.5 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 9/175 (5%)

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
                +N   L        +  V+ +L+ S++D      A  +   +   +ML  +    
Sbjct: 69  YYRRHVNWSYLMKLFPSAAVGVVLATLIGSYIDDQLFRVAMGVIIFVSLAIMLWMETAN- 127

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
           +   PD     +   + G  +  +G        L +L       +   T A     +   
Sbjct: 128 KETIPDYMWFAVLMGLLGGFTSMIGNLAAAVMALYLLSMRLPKNEYIGTGAWFFLAVNVF 187

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT 264
            +   I+S W    L  +SL        L +LP   +   +  K+   I +K   
Sbjct: 188 KVPFHIFS-WHTISLNSFSLN-------LALLPFIAIGAFVGIKIVRYIPEKQYR 234


>gi|329924670|ref|ZP_08279685.1| putative membrane protein [Paenibacillus sp. HGF5]
 gi|328940504|gb|EGG36826.1| putative membrane protein [Paenibacillus sp. HGF5]
          Length = 263

 Score = 38.5 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 78/203 (38%), Gaps = 22/203 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L  V  F++  L    G G  ++  P L   F+      +  + + +  SL       
Sbjct: 29  IILFAVIIFVASILQTSTGFGFSILATPFLLLLFR-----PAEAIQINLILSLV------ 77

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + +  +    I+  ILK  +        +  ++ S +D  +L    ++  L + ++++
Sbjct: 78  ISAALIAKIRKDIDYGILKRLVIGSAAGLTLGIVVFSLIDIVYLKLGVSLIILALTVMLM 137

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT--ATSA 200
            + R+   R           G ++G L+ ++G+ G     LL+ F G    KA    T+ 
Sbjct: 138 LKFRINQSR-----GRDLAVGGLSGSLTTSIGMPG---PPLLLYFSGTDTQKAKLRGTTL 189

Query: 201 GVSALI-AFPALLVRIYSGWGLN 222
                I +   ++  I +G    
Sbjct: 190 AFYLFIYSLSLIIQVIVAGTSKT 212


>gi|186477165|ref|YP_001858635.1| hypothetical protein Bphy_2414 [Burkholderia phymatum STM815]
 gi|184193624|gb|ACC71589.1| protein of unknown function DUF81 [Burkholderia phymatum STM815]
          Length = 262

 Score = 38.5 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 88/270 (32%), Gaps = 35/270 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L   +    G L GL GVGGG +M P+L   F       ++    A+GT L   A T  
Sbjct: 8   LLYSASGLFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAAATKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV------DKSFLNKAFAIFCLLM 137
              + H   G+I+ ++             +T +++             ++    +  L+ 
Sbjct: 61  TGTLVHGVKGSIDWQVTLRLAAGSVPAGTITLILLHRYGMTSSRGGHLISVVLGVALLIT 120

Query: 138 GILMLKRDRLYC--------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY- 188
            I ++ R +L            +     +  + G V G L     VG G     ++L   
Sbjct: 121 AIALVFRPQLTAFAASRTRGTGQGSTLALTMLTGAVLGVLVSLTSVGAGAIGVTVLLLLY 180

Query: 189 -GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
                 +   +    +  +              L G   W LG ++   +  +L  S+  
Sbjct: 181 PMLPTTRIVGSDIAHAVPLTL------------LAGAGHWLLGSIDWSMLGSLLLGSLPG 228

Query: 248 TPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
             + + LS    +K L    +  +      
Sbjct: 229 IMIGSYLSTKAPEKLLRNLLAATLTLVGVR 258



 Score = 37.7 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 48/122 (39%), Gaps = 6/122 (4%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + L ++   + G L  L  VG G + V VL   + ++     +   +A         P
Sbjct: 145 STLALTMLTGAVLGVLVSLTSVGAGAIGVTVLLLLYPMLPTTRIVGSDIAHA------VP 198

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            ++++   H   G+I+  +L   +       ++ S + +   +  L    A    L+G+ 
Sbjct: 199 LTLLAGAGHWLLGSIDWSMLGSLLLGSLPGIMIGSYLSTKAPEKLLRNLLAATLTLVGVR 258

Query: 141 ML 142
           ++
Sbjct: 259 LV 260


>gi|296269766|ref|YP_003652398.1| hypothetical protein Tbis_1793 [Thermobispora bispora DSM 43833]
 gi|296092553|gb|ADG88505.1| protein of unknown function DUF81 [Thermobispora bispora DSM 43833]
          Length = 254

 Score = 38.5 bits (89), Expect = 0.96,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 57/193 (29%), Gaps = 19/193 (9%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+ T+       +  + + + R   ++  +      +      + +   + +D   L   
Sbjct: 44  ALATNKSAAIFGTASAAVTYARRIKLDRGVAVPAGLLAVAFAGLGAASAAMLDPDLLRPL 103

Query: 130 FAIFCLLMGILMLKRD------RLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTN 182
                L +   +  R         +            + GM   F  G LG G G     
Sbjct: 104 VLAALLGVAAFVTLRPSLGRLPHPHLRTARRVAAAVAVAGMAIAFYDGILGPGTGTFLII 163

Query: 183 LLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
                 G    +A+AT+  ++      ALLV              + G V     L +  
Sbjct: 164 AFAAILGMDFVRASATAKVINVGTNLGALLVF------------GAQGHVLWPLGLAMAV 211

Query: 243 ISILITPLATKLS 255
            +I    L  +++
Sbjct: 212 CNIAGAQLGARMA 224


>gi|33595576|ref|NP_883219.1| hypothetical protein BPP0894 [Bordetella parapertussis 12822]
 gi|33565654|emb|CAE40302.1| putative membrane protein [Bordetella parapertussis]
          Length = 246

 Score = 38.5 bits (89), Expect = 0.96,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 75/250 (30%), Gaps = 21/250 (8%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
             A  L   + G+ G G  LV+VP+L+  + L  +            +L ++        
Sbjct: 8   ACAVLLGYVVLGITGFGSALVVVPLLAWRWPLPEVV-----------ALTLLLDVMASLL 56

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           +       ++   L+  +  +    +    +   +D S+      ++   +G   L+   
Sbjct: 57  LGGLNLRQVDFAELRRLLPGMVAGALAGLWLSRSLDASWPLLVLGLYVAAVGAQALRPGP 116

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
                     +         G +    G  G     L++ +    +    A  A    +I
Sbjct: 117 ARPRPPAAAPWALAAG-GAIGVVEMLFGTAG----PLVVAWLSRRLPDVHALRASTPVVI 171

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
              A  V +  GW      P         A++ +    +L   L  + +  +    L   
Sbjct: 172 TVSACSVLLAMGWAGRLSQPELW--TRWLALVGVAAGGVL---LGHRWARHVSPAALRKL 226

Query: 267 FSMIMFTTSF 276
              ++  +  
Sbjct: 227 ICGLLVVSGL 236


>gi|332292143|ref|YP_004430752.1| protein of unknown function DUF81 [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332170229|gb|AEE19484.1| protein of unknown function DUF81 [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 252

 Score = 38.5 bits (89), Expect = 0.97,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 70/190 (36%), Gaps = 13/190 (6%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +A GT+   I      +     ++G +++   K +I  + I  +  +++  +V       
Sbjct: 45  IANGTNRIGIFTQCSATSWVFYKNGRLDIAKNKKYIIPIFIGAIAGAILAINVSNEQFRA 104

Query: 129 AFAIFCLLMGILMLKRDRLYCERK----FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
            F    + M + +L + + +         P  Y+        GF  G + +G G+F  ++
Sbjct: 105 VFKFMMVFMLLAVLVKPKRWLRETDLTFKPKWYIYIPLLFALGFYGGFIQMGMGVFFLII 164

Query: 185 MLFYGASIYKATATSAGV-SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           M+     +      S  + S +I    L   + + +   GL  W LG +     +     
Sbjct: 165 MVL---GMRFNIIESNALKSFVIGLYTL--FVIAIFHYQGLIDWKLGGIM---AIGQTTG 216

Query: 244 SILITPLATK 253
             L    A+K
Sbjct: 217 GFLTARFASK 226


>gi|226939857|ref|YP_002794930.1| permease [Laribacter hongkongensis HLHK9]
 gi|226714783|gb|ACO73921.1| Predicted permease [Laribacter hongkongensis HLHK9]
          Length = 249

 Score = 38.5 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 55/155 (35%), Gaps = 14/155 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + ++ +  F +  + G+ G G  LV  PVL+    L  I             L ++   +
Sbjct: 10  LSVVFLTVFAAYVIFGIAGFGTSLVATPVLAMVVPLGKIVP----------LLALMDMCA 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                         +  LK  I  +   +++ + ++ +     L  A  +F +   +  L
Sbjct: 60  ATGNFLKDGRKA-ELHELKRLIPFMISGSMIGAAILLYARPDTLVLALGLFVVAYAVYAL 118

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
                +  +  P   + +  G+V G  S   G GG
Sbjct: 119 AGIHPH-RKFLPGAAIPF--GLVGGVFSALFGTGG 150


>gi|332995479|gb|AEF05534.1| hypothetical protein ambt_20215 [Alteromonas sp. SN2]
          Length = 256

 Score = 38.5 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 89/258 (34%), Gaps = 27/258 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    ++I  S ++  ++  FG+GGG++++ V++ +  +  +     +            
Sbjct: 16  LTTAAVLIATSTMTSLITATFGIGGGVLLIAVMAGSLPVSALIPVHGL-----------V 64

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                          ++  ++K + F   +  V+ + ++  +    +  A A F L +  
Sbjct: 65  QLGSNGNRALMTFRYVDWSMVKFFSFGALLGAVLATFIVVQLPLVVIQFAVAGFILFLVW 124

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
                 +   +   P    + + G+VT  +S  +G  G       +     +  + TAT 
Sbjct: 125 ----GSKPKAQEMQP--AGRSLAGLVTTLISMFVGATG-PLVAAFVHRNNYNKMQITATM 177

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           A            V  + G+           F  +G +  ++    + T +  K+   I 
Sbjct: 178 ASCLTFQHGLKAFVFTFVGFSF---------FQWLGLIFAMIISGAVGTYVGLKVLKKIP 228

Query: 260 KKYLTIGFSMIMFTTSFV 277
                + F +I+   +  
Sbjct: 229 ADKFLVLFKVIVTLLAIR 246


>gi|331702252|ref|YP_004399211.1| hypothetical protein Lbuc_1902 [Lactobacillus buchneri NRRL
           B-30929]
 gi|329129595|gb|AEB74148.1| protein of unknown function DUF81 [Lactobacillus buchneri NRRL
           B-30929]
          Length = 253

 Score = 38.5 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 56/163 (34%), Gaps = 8/163 (4%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            I  H A+GT+    A  + ++ +E  R G I +K+    +    + +   + M  H+  
Sbjct: 37  GIPAHFAVGTNKLSSAMGTTVATLEFMRSGYIRVKLAFFSVLAAMVGSSFGANMALHISD 96

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY-------IWGMVTGFLSGALGVG 176
            +          +  + +L        R      + +       +  +  G   G  G G
Sbjct: 97  YYFRLILLFVLPITALYLLLNRHSLNSRLAESKPLTWSQFVATILISISLGVWDGFYGPG 156

Query: 177 GGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            G F  L ++      I  A   +  ++      AL V + +G
Sbjct: 157 TGTFLILTLVGIAHLPINLAAGNTKVINLTTNVCALAVFLMNG 199


>gi|169830636|ref|YP_001716618.1| hypothetical protein Daud_0440 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169637480|gb|ACA58986.1| protein of unknown function DUF81 [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 256

 Score = 38.5 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 9/123 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I LI VA  ++G ++   G GG L+ +PVL  A         +   VA GT+   +   S
Sbjct: 6   ILLIFVAGIVAGFVNT-VGGGGSLISLPVLIFA--------GLPSAVANGTNRVALMVQS 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++    RR G    K+         + ++V +     +     N+  A+  LL+ +L++
Sbjct: 57  LVAVGYFRRKGFFYPKLSIFLGVPAVLGSIVGARFAISLSDEMFNQVLAMVMLLVMVLII 116

Query: 143 KRD 145
            R 
Sbjct: 117 VRP 119


>gi|332529233|ref|ZP_08405197.1| hypothetical protein HGR_04963 [Hylemonella gracilis ATCC 19624]
 gi|332041456|gb|EGI77818.1| hypothetical protein HGR_04963 [Hylemonella gracilis ATCC 19624]
          Length = 259

 Score = 38.5 bits (89), Expect = 1.00,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 65/198 (32%), Gaps = 13/198 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  + I A  L G     FG G G + VP+++          ++ +  A    + ++   
Sbjct: 18  FYAVAIPAVLLMGVSKSGFGAGFGSLAVPLMAL---------AVPVPQAAAIFMPILLVM 68

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            ++     R+H  ++ ++L+  +    +     +L+   +D   +     +F LL     
Sbjct: 69  DLLGLWAFRQH--VDWRLLRFMLPCALVGVAAGTLLFRLLDARLVAGLVGLFTLLFLAQR 126

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L           P      +     G  +  +   GG   N   +    +    T T A 
Sbjct: 127 LLFPPRPDSAPPPRWLGAVLTAT--GGFTSFVSHAGGPPINAYAIPLRLAPLVFTGTMAY 184

Query: 202 VSALIAFPALLVRIYSGW 219
           +  ++         + G 
Sbjct: 185 LFFVVNLSKWAPYAWLGL 202


>gi|240850515|ref|YP_002971914.1| hypothetical membrane protein [Bartonella grahamii as4aup]
 gi|240267638|gb|ACS51226.1| hypothetical membrane protein [Bartonella grahamii as4aup]
          Length = 306

 Score = 38.5 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 109/307 (35%), Gaps = 56/307 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + ++I    ++G  SGLFG+GGG ++ P+L           +I   +
Sbjct: 1   MSIYLPIAEMSLNMLILIGMGVVAGFFSGLFGIGGGFLITPLLIFY--------NIPPAI 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----S 124
           A+GT    +  +SV   + H R  T+++K+           +++   + S + K      
Sbjct: 53  AVGTGANQMIASSVTGAITHFRRRTLDIKLGILLAIGGGGGSLIGIQVFSVLKKLGQLDL 112

Query: 125 FLNKAFAIFCLLMGILML-------------------------------KRDRLYCERKF 153
            ++  + I    +G LM+                                + R      +
Sbjct: 113 MISLLYVILLGSVGSLMIVESWYDMMRKRKAGKANIRLAGRHNWIHRLPLKMRFRTSMIY 172

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALL 212
                    G++ G LS  +G+GGG F    +++           TS      ++    +
Sbjct: 173 VSIIPVLGIGLIVGLLSSIMGIGGGFFMIPALIYLLRVPTSVVIGTSLFQITFVSSFTTV 232

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           ++  +   ++           + A L++L  SI      T+    +  + L +  + ++ 
Sbjct: 233 LQSMTNQSVDI----------VLAFLLMLGGSI-GAQYGTRAGRKLKAEQLRMALACLVL 281

Query: 273 TTSFVFA 279
                 A
Sbjct: 282 IVCMRLA 288


>gi|299471278|emb|CBN80271.1| hypothetical protein Esi_0191_0061 [Ectocarpus siliculosus]
          Length = 231

 Score = 38.5 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 7/106 (6%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            V +P L+           +  H A GTSLG +  T       +   G ++ +       
Sbjct: 20  FVAIPFLTGWL-------GLTQHQAHGTSLGAVFATGAAGSTAYALAGHVDYQAAGAIAV 72

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
                    +   + VD + L  A  +  L +  L+  RD+L   +
Sbjct: 73  AGMAAAHAGARCTAGVDGNSLKMALGVLMLAVAPLVPLRDKLSHNK 118


>gi|261823403|ref|YP_003261509.1| hypothetical protein Pecwa_4178 [Pectobacterium wasabiae WPP163]
 gi|261607416|gb|ACX89902.1| protein of unknown function DUF81 [Pectobacterium wasabiae WPP163]
          Length = 253

 Score = 38.5 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 53/187 (28%), Gaps = 26/187 (13%)

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
           I   +   +     I   + + +   +  S    A A F L                  P
Sbjct: 75  IVWPLALWFFIGSVIGIALGAPVAVWLPDSVAKIALASFILWSVFR-------KRTAPKP 127

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL-----IAFP 209
            N + +I G     L   +    G     L+   G +     AT A    L     I   
Sbjct: 128 VNRLFFILGGALTSLGTMVVGATGPMVAGLISSQGVTKKPLIATHALCMVLQHGLKILAF 187

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            ++   Y  W              +  +  ++   +L T L T+L   + +K     F +
Sbjct: 188 GMMGFAYHDW--------------LPMLAAMIVSGVLGTWLGTRLLDNLPEKLFRTTFRL 233

Query: 270 IMFTTSF 276
            M   S 
Sbjct: 234 TMLILSA 240


>gi|297569486|ref|YP_003690830.1| protein of unknown function DUF81 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925401|gb|ADH86211.1| protein of unknown function DUF81 [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 324

 Score = 38.5 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 40/125 (32%), Gaps = 9/125 (7%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + + +    + + GV G  +++P             S        T+             
Sbjct: 17  LVALVISFFTSMGGVSGAFLLLPFQMSILGYTSPSVS-------ATNQLFNIVAIPGGVY 69

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLM-ISHVDKSFLNKAF-AIFCLLMGILMLKRD 145
            + + G +   ++   +       ++ +++ +S +    L K F A   L +G  M+   
Sbjct: 70  RYFKEGRMVWPLVWVVVAGTLPGVLLGAIIRLSWLPDPDLFKLFAAAVLLYIGGRMIIDL 129

Query: 146 RLYCE 150
           R    
Sbjct: 130 RRPAA 134


>gi|90420735|ref|ZP_01228641.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335026|gb|EAS48787.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 252

 Score = 38.5 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 87/265 (32%), Gaps = 27/265 (10%)

Query: 12  VFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
             L        + L+IVASF +   +  FG+GGGL ++ ++S    +  +     + V +
Sbjct: 4   TLLPPGLAAGTVLLLIVASFFTSAATAAFGIGGGLSLLAIMSTVLPVAVLIPVHGL-VQL 62

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
            ++LG +            +   ++ + L  ++    +  ++ +  +  + ++ L     
Sbjct: 63  ASNLGRVLV----------QRRAVSYRALLPFLAGAALGALIGARFVVTLPEAVLQTTLG 112

Query: 132 IFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS 191
            F L++ +  L                    G+VT FLS  +G                 
Sbjct: 113 AFILILALAKL------PAIGRIGPPGFAFAGLVTTFLSMFVGAT-APINAAFFAKAFDD 165

Query: 192 IYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251
             +  AT A  + L      L     G GL               +  ++      T   
Sbjct: 166 RTELVATLAATTFLQHLFKSLAFFALGVGLAA---------YAPLIAAMIVTGFAGTLAG 216

Query: 252 TKLSYMIGKKYLTIGFSMIMFTTSF 276
           T L   I ++      + I+   S 
Sbjct: 217 TALLKRIDERLFRFVLTAILVVISL 241


>gi|300771974|ref|ZP_07081845.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300761360|gb|EFK58185.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 252

 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 53/163 (32%), Gaps = 13/163 (7%)

Query: 45  GLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWI 104
           G + VP+ +  F        + + + M   + VI                     +K  +
Sbjct: 35  GTLAVPLFAFLFGARYSTGIVLILLCMADLIAVI-----------YYRKQFRWSEIKGML 83

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLL-MGILMLKRDRLYCERKFPDNYVKYIWG 163
               +  +    + +++D         I  L  +GI++              ++   ++G
Sbjct: 84  PAAFVGLLGGLFLANNMDDQLFRVLMGICILSGVGIMIWMEKSKSVSTVAEKSWYAPLFG 143

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
            + GF S  +G   G   ++ +L      Y   AT A    ++
Sbjct: 144 FIAGF-STMIGNAAGPALSVYLLSRKLPKYAFVATGAWFIMIL 185


>gi|218667789|ref|YP_002426743.1| hypothetical protein AFE_2351 [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|218520002|gb|ACK80588.1| membrane protein, putative [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 253

 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 66/210 (31%), Gaps = 19/210 (9%)

Query: 10  LMVFLSKDCVVDYICLIIVAS---FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC 66
           +   LS   ++    L  +A     ++  +  + G G GL+ V +L+  F +  +   + 
Sbjct: 3   MHASLSYATLIQNPLLWAIAGVIILVAFYVRAVIGFGSGLISVALLTLIFPIKEVVPVVL 62

Query: 67  MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFL 126
           +                   +       +    L+  I    I     S +++  +   L
Sbjct: 63  L-----------LDLLGSVLLGAYDFREMRWPELRWLIPGSLIGLAFGSFILADTNAQNL 111

Query: 127 NKAFAIFCL-LMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
            +   +F L  +   +L +     +   P      I+G V G L G    GGG      +
Sbjct: 112 TRFLGVFILAYVCYALLMKPERLPQVALPWGMPLGIFGGVVGSLYG----GGGPPIVAYL 167

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRI 215
                      AT  G++         + I
Sbjct: 168 QMRHLDKRAFRATFQGIALTDNILRAFMYI 197


>gi|308051220|ref|YP_003914786.1| hypothetical protein Fbal_3515 [Ferrimonas balearica DSM 9799]
 gi|307633410|gb|ADN77712.1| protein of unknown function DUF81 [Ferrimonas balearica DSM 9799]
          Length = 244

 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 83/243 (34%), Gaps = 30/243 (12%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++    +   + G  G G  +V+ P+L            I M +A+          S
Sbjct: 5   LLWVLAVVTVGAAVQGAIGFGLAVVVTPILYMIDPAWVPAPIILMGMAL----------S 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++    R    +++ +L   +       ++ + ++      +L     +  L+   L +
Sbjct: 55  ILTMW--RIRAPLDIGVLAPALLGRIPGGIIGTYLLVVASAEWLGLGIGLIVLVAVALTV 112

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGAS-IYKATATSAG 201
           ++  +   +        +  G ++G  S    +GG     LL     A+ + +  ++   
Sbjct: 113 RKYSVAFTKAN-----LFWAGTLSGVFSSISAIGGPPMALLLNHHRSAAQMRQTLSSFFL 167

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              +IA   L +    GW       W            +LP + L   +  KL+  +  +
Sbjct: 168 FGCIIALTLLALAGELGWDDLLRGFW------------LLPATALGFAIGDKLANRVEPE 215

Query: 262 YLT 264
            L 
Sbjct: 216 RLK 218


>gi|90421141|ref|ZP_01229043.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90334633|gb|EAS48413.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 251

 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 95/267 (35%), Gaps = 29/267 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  I L+ +A F+SG ++ +   GGG  +      A  L+G+       VA  TS     
Sbjct: 3   VLVIALLFLAGFVSGAINAV--AGGGTFIS---FGALTLIGVPS----IVANATSSIAQL 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           P  + S + +R+      + +     V  I ++  +L + +++ +  +       L    
Sbjct: 54  PGYITSTLAYRKDFAKMWRGVLVLAVVSAIGSLGGALFLLYLNNAQFSAVVPWLLLGATA 113

Query: 140 LMLKRDRLYCERKFPD------NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASI 192
           L      L  + K  D      N+   I    T    G  G G GI     +    G   
Sbjct: 114 LFAAGPWLKPKPKHQDAAAEGRNFASPIVQFFTSIYGGFFGAGMGIMMLATLGLTEGGDY 173

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
           ++  A    ++ +IA  A++V +  G             V+    L ++P   L      
Sbjct: 174 HRLNAIKNLLANVIAITAIIVFVSGGV------------VDWPGALAMIPGVALGGYAGV 221

Query: 253 KLSYMIGKKYLTI-GFSMIMFTTSFVF 278
             +  + +  + +   ++ +    + F
Sbjct: 222 WAAKRVPQIAVRLFVIAIGLILAGYYF 248


>gi|291287272|ref|YP_003504088.1| PilT protein domain protein [Denitrovibrio acetiphilus DSM 12809]
 gi|290884432|gb|ADD68132.1| PilT protein domain protein [Denitrovibrio acetiphilus DSM 12809]
          Length = 324

 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 35/100 (35%)

Query: 51  VLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPIT 110
            +   F        I M  A+  SLGVI     +  +                +  L I 
Sbjct: 11  FILVIFVFTRDKVDITMEQAVLYSLGVIFAIVFIETLLSDIKSYRFFSGAAGALIFLIIG 70

Query: 111 TVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
             + S+  ++     L  AF +F + +G+++ ++     E
Sbjct: 71  YYLASIFAAYFTSDALRLAFYVFVIYVGVMIGQKSSWIVE 110


>gi|119511398|ref|ZP_01630510.1| hypothetical protein N9414_19934 [Nodularia spumigena CCY9414]
 gi|119463943|gb|EAW44868.1| hypothetical protein N9414_19934 [Nodularia spumigena CCY9414]
          Length = 121

 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 10/101 (9%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV-IAPTSVMSFMEHRRHGTINMKILKDWI 104
            +MVP +            +    A GTS+   I P  ++  + + R+G IN+K      
Sbjct: 28  AIMVPAMVLLV-------GLDQKFATGTSIAAQILPIGILGAVVYYRNGNINIKYAAIIA 80

Query: 105 FVLPITTVVTSLMIS--HVDKSFLNKAFAIFCLLMGILMLK 143
             L +  +  +L  +   +    + K + IF LL+GI  L 
Sbjct: 81  VGLIVGNLFGALFANQPFISSEMIKKLYGIFLLLLGIRYLF 121


>gi|119492662|ref|ZP_01623841.1| hypothetical protein L8106_00125 [Lyngbya sp. PCC 8106]
 gi|119453000|gb|EAW34171.1| hypothetical protein L8106_00125 [Lyngbya sp. PCC 8106]
          Length = 120

 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 39/97 (40%), Gaps = 8/97 (8%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAP-TSVMSFMEHRRHGTINMKILKDWIFVLP 108
           P L   F           H A GT+L ++ P   +++   + + G +N+K+         
Sbjct: 31  PALVYWFGF-------SQHYAQGTTLALLVPPIGLLAAWSYYQEGYVNIKVALLICIGFF 83

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           +   V   +   + + +L + F +  L++G  M+   
Sbjct: 84  LGGFVGGKLAGLIPELYLKRIFGVAMLIVGFRMILSK 120


>gi|120602025|ref|YP_966425.1| hypothetical protein Dvul_0977 [Desulfovibrio vulgaris DP4]
 gi|120562254|gb|ABM27998.1| protein of unknown function DUF81 [Desulfovibrio vulgaris DP4]
          Length = 244

 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 11/113 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+  A  + G +SG+ G+GG +V VPV +           I MH  +  S  +      
Sbjct: 7   LLVFFAWLVGGFVSGVSGIGGAMVAVPVAATV---------IPMHELVPLSCIMNVVMDG 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
              + H RH  +    +   +       +    +++ +  + L  A  +  L 
Sbjct: 58  CIALMHYRHCRV--SAMWPMLAGSIPGALAGLYILTVLPGTVLQGAVGVLLLY 108


>gi|209884584|ref|YP_002288441.1| putative domain of unknown function [Oligotropha carboxidovorans
           OM5]
 gi|209872780|gb|ACI92576.1| putative domain of unknown function [Oligotropha carboxidovorans
           OM5]
          Length = 249

 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 80/255 (31%), Gaps = 22/255 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +II+ + ++G + GL G   GLV   +     +   +   +      G  L V +    
Sbjct: 5   LIIILGAVVAGFVQGLSGFTFGLVATSIWIWVVEPQLLASMVVFGALTGQILAVFSV--- 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                       + K+L  ++    I   +   ++  +D             +   +ML 
Sbjct: 62  --------RRGFSWKLLWPYLAGGLIGIPLGVAILPRLDVDLFKVLLGTLLAIWCPIMLF 113

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             RL   R      +  + G+  G +SG  G   G+   L             A     +
Sbjct: 114 SSRLPPIR-IGGAPMNAVIGLFGGVMSGTGGY-SGVIPTLWCALRRYEKDSQRAIIQNFN 171

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
                  +   + +G     +         +    IILP  ++ T + T++   I +   
Sbjct: 172 LATLGVTMATYVATGITTARM---------LPTFAIILPAMLVPTLIGTRVYIGISETTF 222

Query: 264 TIGFSMIMFTTSFVF 278
                +++  +  V 
Sbjct: 223 RQIILVLLTISGVVM 237


>gi|144898386|emb|CAM75250.1| membrane protein [Magnetospirillum gryphiswaldense MSR-1]
          Length = 88

 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 28/74 (37%)

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +L ++AP+SV +   + ++  ++  +         +T      +     +  L +AF   
Sbjct: 12  ALAMVAPSSVFALGAYAQNQRVDWPVGLVLALGGTLTVAAGVALAHRWPERVLRRAFGWM 71

Query: 134 CLLMGILMLKRDRL 147
                + ++    +
Sbjct: 72  MAATSVWLVISQHV 85



 Score = 35.8 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 17/44 (38%)

Query: 232 VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           V+    L++     L       L++   ++ L   F  +M  TS
Sbjct: 33  VDWPVGLVLALGGTLTVAAGVALAHRWPERVLRRAFGWMMAATS 76


>gi|218194771|gb|EEC77198.1| hypothetical protein OsI_15703 [Oryza sativa Indica Group]
          Length = 752

 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/103 (10%), Positives = 36/103 (34%), Gaps = 4/103 (3%)

Query: 51  VLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPIT 110
           ++       G+        ++ T + ++   + +S       G I+ ++    +    + 
Sbjct: 66  LIFALMHFFGLS--FAQSASVMTRINLLVVGASVSTFA--SRGVIDFQLGIPLLLGCAVG 121

Query: 111 TVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
            ++ +     +    +   F +F +L+G  +L     Y  +  
Sbjct: 122 GMMGAWTAKTLSPHRMKAMFLVFSMLLGSKLLWDAMAYPSKPI 164


>gi|91788209|ref|YP_549161.1| hypothetical protein Bpro_2340 [Polaromonas sp. JS666]
 gi|91697434|gb|ABE44263.1| protein of unknown function DUF81 [Polaromonas sp. JS666]
          Length = 263

 Score = 38.5 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 49/131 (37%), Gaps = 6/131 (4%)

Query: 12  VFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAM 71
             L +     +  L ++   + GTL  +  VG G + V VL   +  + +   +   +A 
Sbjct: 137 ELLGEATRAHHWALPVLFGAVIGTLVTMTSVGAGAIGVIVLMLLYPTLPLSRIVAADIAH 196

Query: 72  GTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA 131
                   P ++++ + H   G+++  +L   +        + S ++       +    +
Sbjct: 197 A------VPLTLVAGLGHASIGSVDWSLLIKLLAGSLPGIWLGSHLMHKTPDRVIRSLLS 250

Query: 132 IFCLLMGILML 142
           +     G+ ++
Sbjct: 251 VLLAYAGVKLI 261


>gi|199597049|ref|ZP_03210482.1| Hypothetical integral membrane protein [Lactobacillus rhamnosus
           HN001]
 gi|229553584|ref|ZP_04442309.1| hypothetical integral membrane protein [Lactobacillus rhamnosus
           LMS2-1]
 gi|258538725|ref|YP_003173224.1| integral membrane protein [Lactobacillus rhamnosus Lc 705]
 gi|199592182|gb|EDZ00256.1| Hypothetical integral membrane protein [Lactobacillus rhamnosus
           HN001]
 gi|229313209|gb|EEN79182.1| hypothetical integral membrane protein [Lactobacillus rhamnosus
           LMS2-1]
 gi|257150401|emb|CAR89373.1| Conserved integral membrane protein [Lactobacillus rhamnosus Lc
           705]
          Length = 250

 Score = 38.5 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 60/172 (34%), Gaps = 12/172 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I  ++  S L+G L+G+ G+   L + PVL            +    A  T+   + 
Sbjct: 3   IETILFLLGMSLLAGILNGIVGM-AALTLYPVLLSV--------GVAPITANATNTIGLL 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +   +    R     +         +  I  V  +L++ H   +   +       L G+
Sbjct: 54  FSGSSAVAASRHELKDHWHQALVITLLNTIGGVFGALILIHSSNAGFKRVVPFIIFLAGV 113

Query: 140 LMLKRDRLYCERKFPD---NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           L+L   +             ++ Y+  M+ G   G  G G G+    ++   
Sbjct: 114 LILMPPKPASSNSSTRQHLRWLGYVLVMLVGIYVGYFGAGAGLLMVAVLSRL 165



 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V   L G   G FG G GL+MV VLS+  +      +   ++A   SL     TS+
Sbjct: 134 WLGYVLVMLVGIYVGYFGAGAGLLMVAVLSRLVEGPYATYNAMRNLA---SLVNNLVTSI 190

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M          I   +L      L     +  +++  +    +  A  IF L + + +  
Sbjct: 191 MFIFS----MPIAWGVLIPVCIGLFAGGFLGPVIVRLIPSRIIKTAVGIFALGLAVFLFY 246

Query: 144 R 144
           +
Sbjct: 247 Q 247


>gi|77460157|ref|YP_349664.1| protein-disulfide reductase [Pseudomonas fluorescens Pf0-1]
 gi|77384160|gb|ABA75673.1| thiol:disulfide interchange protein DsbD [Pseudomonas fluorescens
           Pf0-1]
          Length = 577

 Score = 38.5 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 53/178 (29%), Gaps = 34/178 (19%)

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI----WG 163
            I  ++ + + + +   +L   FA   +++ + M     L       D           G
Sbjct: 221 VIAALLGANLQAWLQNPWLLGTFAAVFVVLALPMFGFFELQLPVALRDRLEHASRSQRGG 280

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG--L 221
            + G  +G LG   G+     M                          L+ I        
Sbjct: 281 SLVG--AGILGALSGLLVGPCMTA-------------------PLAGALLYIAQSGNALH 319

Query: 222 NGLPPWSLGF-VNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
            GL  ++LG  + +  +L++   +  +      ++       L   F  +   T+ + 
Sbjct: 320 GGLILFALGIGIGVPLLLLVTVGNRFLPKPGAWMN------LLKGVFGFLFLATALLM 371


>gi|222150105|ref|YP_002551062.1| hypothetical protein Avi_4209 [Agrobacterium vitis S4]
 gi|221737087|gb|ACM38050.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 247

 Score = 38.5 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 67/170 (39%), Gaps = 11/170 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I L+ VA F S  ++ +   GGG  +         L G+        A  TS  +  
Sbjct: 3   IEIISLMFVAGFFSAVVNAI--AGGGTFLT---FGVLTLAGLPSVT----ANATSSIIQF 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
           P  + S + +RR    + K      F+  + ++V +L++  +     ++      L+  +
Sbjct: 54  PGYITSTLAYRREIAAHWKSAALLSFISAVGSLVGALILISLSNPTFSRLVPWLLLMATL 113

Query: 140 LMLKRDRL--YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
           +     RL    +++ P N +  +   +T    G  G G GI     + F
Sbjct: 114 VFALGPRLRRKADQQHPANLLGLLLQGITSIYGGFFGAGMGIMMLASLQF 163


>gi|46580681|ref|YP_011489.1| hypothetical protein DVU2276 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46450100|gb|AAS96749.1| membrane protein, putative [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311234402|gb|ADP87256.1| protein of unknown function DUF81 [Desulfovibrio vulgaris RCH1]
          Length = 248

 Score = 38.5 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 11/113 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+  A  + G +SG+ G+GG +V VPV +           I MH  +  S  +      
Sbjct: 11  LLVFFAWLVGGFVSGVSGIGGAMVAVPVAATV---------IPMHELVPLSCIMNVVMDG 61

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
              + H RH  +    +   +       +    +++ +  + L  A  +  L 
Sbjct: 62  CIALMHYRHCRV--SAMWPMLAGSIPGALAGLYILTVLPGTVLQGAVGVLLLY 112


>gi|320354943|ref|YP_004196282.1| hypothetical protein Despr_2857 [Desulfobulbus propionicus DSM
           2032]
 gi|320123445|gb|ADW18991.1| protein of unknown function DUF81 [Desulfobulbus propionicus DSM
           2032]
          Length = 351

 Score = 38.5 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 32/84 (38%), Gaps = 5/84 (5%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-- 121
              M  A+GT +  +A  S++S M H + G ++ K+    +    +     + M+  +  
Sbjct: 50  GFPMAFAIGTDIAHMAGKSLISTMRHGKFGNVDYKLGMIMLVGTVVGFECGAQMVMWLER 109

Query: 122 ---DKSFLNKAFAIFCLLMGILML 142
               +  +   +    L +   + 
Sbjct: 110 LGSVEKVVRWIYVGLLLFIAWTVF 133



 Score = 35.8 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 34/107 (31%)

Query: 66  CMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF 125
             HVA+GT L  +A + +     +   G   +      +    +   V ++   ++    
Sbjct: 222 PTHVAVGTDLFEVAISGLYGAATYTFKGRTELVAAMVMLVGAAMGAQVGAVATKYIKGYG 281

Query: 126 LNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGA 172
           +   F    L     +L +       ++ D         V G ++  
Sbjct: 282 IRIIFGYAVLGCMASILMKLVQPWLPQYKDLLNNMATITVLGLITAM 328


>gi|295692198|ref|YP_003600808.1| predicted permease [Lactobacillus crispatus ST1]
 gi|295030304|emb|CBL49783.1| Predicted permease [Lactobacillus crispatus ST1]
          Length = 252

 Score = 38.5 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/231 (11%), Positives = 78/231 (33%), Gaps = 21/231 (9%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +GI        A  T+   +  TS+ S +   +    + K +  +     + ++
Sbjct: 31  YPVLLAVGIPPVF----ANVTNDAALIWTSIGSTVSSTKELKGHWKQVWFYTIFTVVGSI 86

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC--ERKFPD--NYVKYIWGMVTGF 168
           +  +++         KA   F    G++++   + +    +  P     + ++  +V G 
Sbjct: 87  LGCILLLSFPPKIFEKAVPFFIAFSGLMIIVSGKHHSLNTKAQPTWLKIIYFLALLVMGM 146

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKAT-ATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +G  G  GG+   +L+ +     +    A    +       AL++ +++          
Sbjct: 147 YTGYFGAAGGVIVLVLLTYITNDRFIVINAIKNVICGFANLVALIIFMFTS--------- 197

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               +     + +     +   +   +   + +K + I  + + F  +  F
Sbjct: 198 ---HIYWLQAIPLAIGMFIGGYIGPAILRRVPEKPVRIFIASLAFIQAGYF 245


>gi|51245553|ref|YP_065437.1| hypothetical protein DP1701 [Desulfotalea psychrophila LSv54]
 gi|50876590|emb|CAG36430.1| hypothetical membrane protein [Desulfotalea psychrophila LSv54]
          Length = 250

 Score = 38.5 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 12/164 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            ++  A  L+G ++ + G G  +V +P+++    ++G      + VA+ +   ++   +V
Sbjct: 9   LVVFFAWMLAGFVNNIAGFGAAMVAMPIIAIWSAVVG----ESISVAVPSCTLIVLALNV 64

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                HR +  I    LK  +      T V   ++  + ++ L  +  IF +L G L L 
Sbjct: 65  QLAWSHRSY--IQWARLKYLVIGGIFGTAVGIKVLPLLSETVLQLSMGIFLILYGGLGLI 122

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
           R      R+     +  +WG++ G LS  LG+  G     L ++
Sbjct: 123 R------REKKQVAISSVWGLLAGILSTILGLAFGFNGPPLAVY 160


>gi|256847238|ref|ZP_05552684.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715902|gb|EEU30877.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
          Length = 255

 Score = 38.5 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
               +   L G  +G FG   G ++V VL              +  A+G      A T++
Sbjct: 139 VFYTICLVLVGIYAGYFGAASG-IVVLVLLTYLTEEKFIVVNALKNAVG------AFTNL 191

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            + + +     I           + I   +  +++ HV    +    AI  +   ++  K
Sbjct: 192 AALLIYAFTSHILWWDAIPMAIGMFIGGYLGPIVVRHVSAKLMRWIIAILAVTQALIYFK 251

Query: 144 R 144
           +
Sbjct: 252 Q 252


>gi|209543528|ref|YP_002275757.1| hypothetical protein Gdia_1361 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209531205|gb|ACI51142.1| protein of unknown function DUF81 [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 261

 Score = 38.5 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 47/119 (39%), Gaps = 6/119 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + G L  L  VG G + V  L   +  +     +   +A         P ++
Sbjct: 149 ILTVLVGAVLGLLVSLSSVGAGAIGVTALLVLYPRLSTAQIVAADIAHA------VPLTL 202

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++ + H   G++N  +L   +       V+ SL + ++ +S      A    ++G  ++
Sbjct: 203 VAGLGHWLLGSVNPAMLVSLLMGSIPGIVLGSLFVGYIRESIQRAVLATILTIVGARLI 261


>gi|332992440|gb|AEF02495.1| hypothetical protein ambt_04725 [Alteromonas sp. SN2]
          Length = 302

 Score = 38.1 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 73/217 (33%), Gaps = 24/217 (11%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L  +   +    +   G GGG+V VP     F  +       +  +       +   ++ 
Sbjct: 40  LFSLLGIIGAIFANATGAGGGVVFVPF----FNHLAFSSQSVVATSFAIQCCGMTAGAIT 95

Query: 85  SFMEHRRHGTIN--MKILKDWIFVLPITTVVTSLMISHVDKSF------------LNKAF 130
            +   R H   +   + L   + +    ++          + F            ++  F
Sbjct: 96  WWRYKRCHHQTDSQWRALPTSLMLSVPASLCGVWFAQFGPEKFSVLSPLKGGIEQIHLGF 155

Query: 131 AIFCLLMGILM------LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
             F +L+ + +      LKR  L  + +  D     +     G ++  L VG G    + 
Sbjct: 156 GAFSILLAVAIFASIPFLKRVALKQDAEQFDIVALPVISFFGGIVTAWLSVGVGELVAVY 215

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL 221
           ++  G ++  A A +  +SA   + A++  +     +
Sbjct: 216 LIIRGFNVTMAIAVAVILSAFTVWGAVIYHVLVTQAV 252


>gi|223936480|ref|ZP_03628392.1| protein of unknown function DUF81 [bacterium Ellin514]
 gi|223894998|gb|EEF61447.1| protein of unknown function DUF81 [bacterium Ellin514]
          Length = 239

 Score = 38.1 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 16/155 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I +   ++G + GL G G GLV + +L     L        ++  + T         V
Sbjct: 4   AFITMTLAIAGFVQGLTGFGFGLVSMSLLPLILGLKQAAMVGTIYGLVAT---------V 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-ML 142
            +F +H R    N ++   + F   +   +    +    +  L +    F L+       
Sbjct: 55  GTFFQHYR--EFNWRLGATFFFSSCLGVPLGVYFLEKTSEGILLRVLGTFMLIFAAREFF 112

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
            R +L          V   +G+ +G LSGA  +GG
Sbjct: 113 LRRKLQPMHP----AVSVPFGLFSGSLSGAFNLGG 143


>gi|197121842|ref|YP_002133793.1| hypothetical protein AnaeK_1433 [Anaeromyxobacter sp. K]
 gi|196171691|gb|ACG72664.1| protein of unknown function DUF81 [Anaeromyxobacter sp. K]
          Length = 247

 Score = 38.1 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 77/259 (29%), Gaps = 24/259 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+  AS  +G ++ + G GG L+  P L  A         +    A  TS   + P  +
Sbjct: 7   VLVTAASAAAGLVNAVAG-GGTLLTFPALLLA--------GLSPVTANATSTVALWPGQI 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL----LMGI 139
            S   +RRH                +   + S+++  + +           L    L+ +
Sbjct: 58  SSVWAYRRHLDEERHRAIVLGLPALLGGALGSVLLLALPEKAFAAVVPWLILFACALLAL 117

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
               R  +  +         +    +     G  G G GI            +  A    
Sbjct: 118 QGPIRRAVGHQVAGNHPVALWTIQFLISIYGGYFGAGIGIL-----------MLAAMGIL 166

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
              S   A    ++      G+  +   + G V+     ++   S++   +   ++  + 
Sbjct: 167 LPSSLQHANALKVLFALLTNGVACVLFLAWGKVDPPLAALMAVASLVGGWVGAHVAQRLP 226

Query: 260 KKYLTIGFSMIMFTTSFVF 278
              +      I    +  F
Sbjct: 227 PAGMKAFAIAIGLFAAAKF 245


>gi|302519360|ref|ZP_07271702.1| permease [Streptomyces sp. SPB78]
 gi|318056422|ref|ZP_07975145.1| hypothetical protein SSA3_00662 [Streptomyces sp. SA3_actG]
 gi|318075447|ref|ZP_07982779.1| hypothetical protein SSA3_01682 [Streptomyces sp. SA3_actF]
 gi|302428255|gb|EFL00071.1| permease [Streptomyces sp. SPB78]
          Length = 337

 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 11/117 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++VA F+ G +SGL GVG   V   VL   F+       +   VA  T++ ++   S+
Sbjct: 168 AVLVVAGFVGGLVSGLVGVGENTVAFIVLVMLFR-------VSEKVATPTTVILMTVVSL 220

Query: 84  MSFMEHRR----HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
            +F+ H           +      + V+ +   + +L+ S + +S +         +
Sbjct: 221 AAFLSHVLVIDDFSAARVDYWLAAVPVVCVGAPLGALICSALSRSTIRNVLVALITV 277


>gi|114567592|ref|YP_754746.1| permease [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
 gi|114338527|gb|ABI69375.1| permease [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
          Length = 301

 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 58/167 (34%), Gaps = 11/167 (6%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
              L+    +    +A+GT+L  +  T++     H   G  +   +           ++ 
Sbjct: 73  MLPLLKFGFNYSTTLAVGTTLFAVIFTAISGGYAHFFRGNAHRPSIAYISLGGVGGILLG 132

Query: 115 SLMISHVDKS--FLNKAFAIFCLLMGILM----LKRDRLYCERKF----PDNYVKYIWGM 164
           S     + +    LN    +F +  G  M    L   +   E +              GM
Sbjct: 133 SFFFQMLAEQMKLLNLVLGLFFVFPGFFMIWESLFSRQNEAEEETQNIKEKPLGLSALGM 192

Query: 165 VTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPA 210
           V GFL+G LG+GGG      M  F+G  IY A  TS      I    
Sbjct: 193 VVGFLTGILGLGGGYLLVPGMTYFFGYPIYLAVGTSLISVIPITIVG 239


>gi|329896779|ref|ZP_08271716.1| protein of unknown function DUF81 [gamma proteobacterium IMCC3088]
 gi|328921580|gb|EGG28959.1| protein of unknown function DUF81 [gamma proteobacterium IMCC3088]
          Length = 248

 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 74/185 (40%), Gaps = 15/185 (8%)

Query: 26  IIVASFLSGTL-SGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++V++ L G   +GL GV   +  VP+L+  F             + G +LG++    +M
Sbjct: 13  LLVSALLIGMAKTGLHGV--AMPTVPLLALMFGAKD---------STGLALGMLVAADIM 61

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + + + RH   +  +L        +  V+ +LM   +  +    A  IF ++  +LM+ +
Sbjct: 62  AVLYYHRHA--DWAVLWRVFPAAGVGVVLGTLMGDLITDAGFAVAMVIFIVVSLLLMVWQ 119

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA 204
           + L      P + V  +   V G ++  +G   G   +L +L           T A    
Sbjct: 120 E-LKQSVWVPKHPVFAVSAGVLGGVTTMVGNMAGPVMSLYLLSQRLPKQTYIGTVAWFFL 178

Query: 205 LIAFP 209
            +   
Sbjct: 179 AVNLF 183


>gi|325116699|emb|CBZ52252.1| hypothetical protein NCLIV_020390 [Neospora caninum Liverpool]
          Length = 675

 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 40/97 (41%), Gaps = 5/97 (5%)

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             +++L  G ++Y+ATATS  +    +     + ++        P      +++  VL++
Sbjct: 160 VPIMILVMGFTVYEATATSQALMFGGSLAGTCLNLFRRHPFADRPA-----IDLDLVLLM 214

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+ I        ++       +     +++F T++ 
Sbjct: 215 GPMQIAGATYGLVINRCWPVYLIMAVLVVLLFATAYK 251


>gi|323455626|gb|EGB11494.1| hypothetical protein AURANDRAFT_70967 [Aureococcus anophagefferens]
          Length = 496

 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 59/145 (40%), Gaps = 15/145 (10%)

Query: 9   SLMVFLSKDCVVDY-ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
            L  +   + V+++   +++ A F+ G  +   G G  +    VL+  F+       +  
Sbjct: 261 DLTPYWWANLVLNWKALVLLAAGFIGGIFTSFAGSGIDICSFSVLTLLFR-------VSE 313

Query: 68  HVAMGTSLGVIAPTSVMSF-----MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             A  TS+ ++A  +V++      M       +  +       ++ I   + S++ S+V 
Sbjct: 314 KTATPTSVVLMAINTVIAMCYCKWMMREGLEALAWEFFTVCAPIVVIGAPLGSVVGSYVH 373

Query: 123 KSFLNKAFAI--FCLLMGILMLKRD 145
           +  L     +  F  L+G L++ R 
Sbjct: 374 RLVLATFVYVTDFVQLVGALIVVRP 398


>gi|325290618|ref|YP_004266799.1| protein of unknown function DUF81 [Syntrophobotulus glycolicus DSM
           8271]
 gi|324966019|gb|ADY56798.1| protein of unknown function DUF81 [Syntrophobotulus glycolicus DSM
           8271]
          Length = 247

 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 69/183 (37%), Gaps = 21/183 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  + +  +G L   FG+G G  + P+LS  F+       + +         ++  T +
Sbjct: 4   LLFGLTALFAGFLKNGFGIGAGAFLTPILSLFFEPAYTIPFMTV---------ILLITDI 54

Query: 84  MSFMEHRRHGTINMKI--LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           +      ++  +  +   L   IF   I TVV  +++ ++      K   +  L+ G+ +
Sbjct: 55  IGV----KNCWMEWESQNLLSLIFSGVIGTVVGIILLIYLPVHNFKKVMGLIALIYGLWI 110

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVT---GFLSGALGV---GGGIFTNLLMLFYGASIYKA 195
           L     +  +K  +  +  + G  T   G  +G +G     GGI  N+ +          
Sbjct: 111 LYTKSKFYRQKKDNGGISQVLGFQTILWGSAAGVIGAMANAGGIVLNIYLSRLQYDRRTY 170

Query: 196 TAT 198
             T
Sbjct: 171 IGT 173


>gi|149927933|ref|ZP_01916183.1| predicted permease [Limnobacter sp. MED105]
 gi|149823372|gb|EDM82605.1| predicted permease [Limnobacter sp. MED105]
          Length = 265

 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 87/252 (34%), Gaps = 40/252 (15%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L+  F        I    A+GT L   A T     + HR   T+N KI+      
Sbjct: 30  LMTPLLTVLF-------GIPATTAVGTDLAFAAITKGAGTVVHRLRNTVNWKIVGLACLG 82

Query: 107 LPITTVVTSLMISHVDKSFLNK-----------AFAIFCLLMGILMLKRDRLYCERKFPD 155
               ++VT  ++  +D     K                 L +G+L+ K   ++  +  P 
Sbjct: 83  SVPASLVTIAILHGLDIQNAGKGSPIDVFIRWSISICVMLTVGVLIFKTKIVHWLQNHPQ 142

Query: 156 NYVK--------YIWGMVTGFLSGALGVGGGIF--TNLLMLFYGASIYKATATSAGVSAL 205
             ++         +   V G L     +G G      L+ML+      +   T    +  
Sbjct: 143 AQLQDKTRTIATVVAFAVIGMLVTVSSIGAGAIGAMVLIMLYPHLKASEIAGTDIAYAVP 202

Query: 206 IAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTI 265
           +   A                +SLG V+ G +  +L  SI    + + LS  + +K+L  
Sbjct: 203 LTAVAAFG------------HFSLGTVDFGLLGALLIGSIPGITIGSYLSRAVPEKFLRG 250

Query: 266 GFSMIMFTTSFV 277
             +  +   +  
Sbjct: 251 VLATTLTAVAAK 262



 Score = 35.4 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 42/116 (36%), Gaps = 6/116 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +VA  + G L  +  +G G +   VL   +  +   +        GT +    P + ++ 
Sbjct: 155 VVAFAVIGMLVTVSSIGAGAIGAMVLIMLYPHLKASEIA------GTDIAYAVPLTAVAA 208

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             H   GT++  +L   +        + S +   V + FL    A     +   ++
Sbjct: 209 FGHFSLGTVDFGLLGALLIGSIPGITIGSYLSRAVPEKFLRGVLATTLTAVAAKLV 264


>gi|48869211|gb|AAT47200.1| putative permease [Edwardsiella ictaluri]
          Length = 241

 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 70/196 (35%), Gaps = 15/196 (7%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              +     L+G +SG+ G G  +V++P L   F            +A+     VI   S
Sbjct: 3   FIYVTGIGILAGVISGIVGTGSSIVLLPALIYYFG----PKEAVPIMAVA---SVIGNVS 55

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +         +I++K    +        VV +  +  +     +   A F +L+   + 
Sbjct: 56  RIVSW----RKSIHIKAFLYYSLPGIPAAVVGARTLWVLPTDITDVIIACFFILL---IP 108

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
            R           N+   I G++ GFL+G +    G  T  L  FYG +     +T A  
Sbjct: 109 WRRWAKVRNFSITNWQLSIAGVILGFLTGVV-FSTGPLTVPLFSFYGLTKGVLLSTEAAA 167

Query: 203 SALIAFPALLVRIYSG 218
           S +I     +     G
Sbjct: 168 SFVIYISKSITFSTIG 183


>gi|68535609|ref|YP_250314.1| hypothetical protein jk0537 [Corynebacterium jeikeium K411]
 gi|68263208|emb|CAI36696.1| putative membrane protein [Corynebacterium jeikeium K411]
          Length = 264

 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 78/251 (31%), Gaps = 29/251 (11%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  D   +   ++ V SF++G +         +V    L     ++ +  +     AM T
Sbjct: 1   MLADLSAEAFSVLAVGSFVAGLID-------AIVGGGGLILIPLILIVAPATPEASAMAT 53

Query: 74  S-LGVIAPTSVMSFM---EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           + L  +  TS  +            I+ +++   + +  +     +L+++ +    L   
Sbjct: 54  NKLAAVFGTSSAAARMLRASDVRQKIDRRLVAYGVPLAFVCAASGALLVAALSSEVLRPL 113

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDN-----YVKYIWGMVTGFLSGALGVG-GGIFTNL 183
             I  L +G  +  +      ++ P        +      V     G  G G G     +
Sbjct: 114 VIILLLAVGTYVALKPSFGTPQRAPSQSHRRWLIALFAVGVIAAYDGFFGPGTGTFLIIV 173

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
                  S  ++ A +  ++      AL V                G V     L +   
Sbjct: 174 FTALLSRSFVESAALAKIINTATNLGALTVFAIG------------GHVLWLLGLGLAVF 221

Query: 244 SILITPLATKL 254
           ++    +  +L
Sbjct: 222 NVAGAQIGARL 232


>gi|189345912|ref|YP_001942441.1| hypothetical protein Clim_0369 [Chlorobium limicola DSM 245]
 gi|189340059|gb|ACD89462.1| protein of unknown function DUF81 [Chlorobium limicola DSM 245]
          Length = 262

 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           I+A FL G ++ L GV GG +++P +   F        I + +A   SL V  PT ++SF
Sbjct: 146 IIAGFLIGIVAALLGVAGGELLIPTIVLLF-------GIDIKLAGSLSLAVSLPTMLVSF 198

Query: 87  MEHRRHGTI-----NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             + R  +      N   +        + T     ++  + ++ L    A+  L+  I +
Sbjct: 199 ARYSRDSSFAVLGRNKTFVLIMASGSIVGTWTGGQLLGLIPETVLLPLLALLLLISAIKV 258

Query: 142 L 142
            
Sbjct: 259 W 259


>gi|116695808|ref|YP_841384.1| putative integral membrane protein [Ralstonia eutropha H16]
 gi|113530307|emb|CAJ96654.1| putative integral membrane protein [Ralstonia eutropha H16]
          Length = 256

 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 8/106 (7%)

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKS---FLNKAFAIFCLLMGILMLKRDRL 147
           +   I+ + +      +  + VV  L++ ++  S    L        L  G+    +   
Sbjct: 68  KLQHIDWRAVAAAAIGILPSVVVGVLVLEYLSSSAATLLQLLLGAVILYGGLSAALKPAP 127

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
             +R    +   ++ G+  G LSG  GV G     L+  FY   + 
Sbjct: 128 LAQRS--GDGTFFVSGVFGGLLSGMFGVSG---PPLIFQFYRQPMK 168


>gi|17228198|ref|NP_484746.1| hypothetical protein all0703 [Nostoc sp. PCC 7120]
 gi|17130048|dbj|BAB72660.1| all0703 [Nostoc sp. PCC 7120]
          Length = 123

 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 10/101 (9%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV-IAPTSVMSFMEHRRHGTINMKILKDWI 104
            +MVP +     L           A GTS+   I P  ++    + R G IN K      
Sbjct: 28  AIMVPAMVLLMGLD-------QKFATGTSIAAQILPIGLLGAAVYHRSGNINFKYAVIIA 80

Query: 105 FVLPITTVVTSLMIS--HVDKSFLNKAFAIFCLLMGILMLK 143
             L +  +  ++  +   +    + K + +F L +G   L 
Sbjct: 81  VGLLVGNLFGAMFANQPFITSETMKKLYGVFLLAIGFRYLL 121


>gi|148255188|ref|YP_001239773.1| hypothetical protein BBta_3790 [Bradyrhizobium sp. BTAi1]
 gi|146407361|gb|ABQ35867.1| putative membrane protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 241

 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 73/203 (35%), Gaps = 17/203 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
              ++    ++GTLSG+ G G  ++++PVL+  +            +A+   +      +
Sbjct: 3   FLFVLAVGLIAGTLSGIVGTGSSIMLMPVLAYEYG----PKEAVPIMAVAAVMA-----N 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +   +   R   ++ +    +         + +  +  +    ++    +F +     M+
Sbjct: 54  LSRILAWWR--EVDWRACAAYSVTGIPAAALGARTLLILPSQAVDITIGLFLMA----MV 107

Query: 143 KRDRLYCERKFPDNYV-KYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
                    +   N     + G + GFL+G + V  G  +  L LFYG S     AT A 
Sbjct: 108 PVRHWLTRHEIKANLWHLALGGAIIGFLTGIV-VSTGPLSVPLFLFYGLSKGAFLATEAA 166

Query: 202 VSALIAFPALLVRIYSGWGLNGL 224
            S  +     +     G    G+
Sbjct: 167 SSLGLYLSKSVTFQRFGALTPGI 189


>gi|281355389|ref|ZP_06241883.1| protein of unknown function DUF81 [Victivallis vadensis ATCC
           BAA-548]
 gi|281318269|gb|EFB02289.1| protein of unknown function DUF81 [Victivallis vadensis ATCC
           BAA-548]
          Length = 251

 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 72/233 (30%), Gaps = 23/233 (9%)

Query: 55  AFQLMGIDDSICMHVA----MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPIT 110
           A   +G+   + + +A    + T L +I                 + KI+   +      
Sbjct: 29  AIPGIGVLPVVLLTMAFEGRLSTGLQLIMLAMADLIAVAYYRRNADWKIVLRLLPWAWAG 88

Query: 111 TVVTSLMISHVDK---SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
             + S ++  + +     +        L++ +L   R RL  E+      V    G + G
Sbjct: 89  LAIGSFILHVIPEDNDRIMRMIIGGIVLVLALLNYIRSRLPQEKIPTGLAVSAGCGTLLG 148

Query: 168 FLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
             +      G     L  L            SA    +I +  L + I+ G         
Sbjct: 149 VTTQIANAAG-PVAALYFLAMRLPKTVYMGCSAWFFLIINWTKLPIFIWEGR-------- 199

Query: 228 SLGFVNIGAV---LIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               + + A    L+++P   +   L   L   + +K       +++  T+  
Sbjct: 200 ----ITLQAFRIDLLMIPFLFIGGALGVFLLAKMPQKLFENIIQILVVITAIK 248


>gi|84684229|ref|ZP_01012131.1| membrane protein, putative [Maritimibacter alkaliphilus HTCC2654]
 gi|84667982|gb|EAQ14450.1| membrane protein, putative [Rhodobacterales bacterium HTCC2654]
          Length = 250

 Score = 38.1 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 76/241 (31%), Gaps = 21/241 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  + I A   +G   G FG G      P+L+   +            A+G  L ++   
Sbjct: 7   FFLVAIPAVIFAGISKGGFGSGAAFAATPLLALILE---------PGQAVGLMLPLLMLM 57

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL-LMGIL 140
            V +   + +    +       I        + ++     D            +  +   
Sbjct: 58  DVTALKPYWKKW--DRFAALMLILGAIPGVALGAVFYHLADPDLFRLLIGAVAIGFVAFQ 115

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           + ++  L    + P      +     G  +  +   GG    + +L  G       AT+ 
Sbjct: 116 LARKFGLLRPARQPMGRTGGLISGTVGGFTSFVSHAGGPPAAVFLLSRGLDKTTYQATTV 175

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
            V   I     +  ++ G              ++ A ++++P +++   L  KL  +I +
Sbjct: 176 LVFWAINLMKFVPYMFLGIFTWQ---------SLKADVMLIPAAVIGVWLGVKLHDIIPE 226

Query: 261 K 261
           +
Sbjct: 227 R 227


>gi|149198963|ref|ZP_01876004.1| hypothetical protein LNTAR_19902 [Lentisphaera araneosa HTCC2155]
 gi|149137958|gb|EDM26370.1| hypothetical protein LNTAR_19902 [Lentisphaera araneosa HTCC2155]
          Length = 257

 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 83/278 (29%), Gaps = 36/278 (12%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M F+      D+  L I A  +    +G+ G+G  ++ VP+ +  F        +   + 
Sbjct: 1   MSFIESLTSTDWALLYISALIVGFAKTGITGIG--ILAVPLFAMVFPAEKSAGILLPVLC 58

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVV-----------TSLMIS 119
           +   + V                  + K +   +  + +  +             S+M  
Sbjct: 59  VADLVAVF-----------YYRNHADWKQIWRLMPWVAVGLLSATLIYYFGRQEGSMMGD 107

Query: 120 HVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
            +  S       I  L+    + +R+     ++ P          V    +  L    G 
Sbjct: 108 FIRTSMKPTMGIIVLLVQAFGLWRRNH----KEVPKGKTSAGIAGVAAGFTSMLANAAGP 163

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLI 239
              + +L           T A    +I +   +  +  G          L    I A+L 
Sbjct: 164 IMAIYLLMMKLPKKTFIGTKAWFFLIINYV-KIPLMIVGANSINQQTLMLNAKLIPAIL- 221

Query: 240 ILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                 L + L  +L  +I +    I   +++F +   
Sbjct: 222 ------LGSFLGVRLVNIIPEDKFRIMVQILVFASCLK 253


>gi|289677193|ref|ZP_06498083.1| hypothetical protein PsyrpsF_28163 [Pseudomonas syringae pv.
           syringae FF5]
          Length = 141

 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 43/98 (43%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A   +G+   +   +A GT+L ++ P  +++   + +   I ++     I    I   +T
Sbjct: 29  AIPALGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALMLIIPSFIFAWLT 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           SL+   VD   +  AF  F +++ +  + +     ++ 
Sbjct: 89  SLLAVRVDPQGMRLAFVGFLVVLTVFNVAQMYWRSKQA 126


>gi|256844484|ref|ZP_05549970.1| permease [Lactobacillus crispatus 125-2-CHN]
 gi|256613562|gb|EEU18765.1| permease [Lactobacillus crispatus 125-2-CHN]
          Length = 252

 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/231 (11%), Positives = 78/231 (33%), Gaps = 21/231 (9%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +GI        A  T+   +  TS+ S +   +    + K +  +     + ++
Sbjct: 31  YPVLLAVGIPPVF----ANVTNDAALIWTSIGSTVSSTKELKGHWKQVWFYTIFTVVGSI 86

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC--ERKFPD--NYVKYIWGMVTGF 168
           +  +++         KA   F    G++++   + +    +  P     + ++  ++ G 
Sbjct: 87  LGCILLLSFPPKIFEKAVPFFIAFSGLMIIVSGKHHSLNTKAQPTWLKIIYFLALLIMGM 146

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKAT-ATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +G  G  GG+   +L+ +     +    A    +       AL++ +++          
Sbjct: 147 YTGYFGAAGGVIVLVLLTYITNDKFIVINAIKNVICGFANLVALIIFMFTS--------- 197

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               +     + +     +   +   +   + +K + I  + + F  +  F
Sbjct: 198 ---HIYWLQAIPLAIGMFIGGYIGPAILRRVPEKPVRIFIASLAFIQAGYF 245


>gi|186686349|ref|YP_001869545.1| hypothetical protein Npun_R6329 [Nostoc punctiforme PCC 73102]
 gi|186468801|gb|ACC84602.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102]
          Length = 123

 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 10/101 (9%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGV-IAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           M+P +     L          +A GTS+   I P  +++ + + R+G +N+K        
Sbjct: 30  MIPAMVLVIGLD-------QKLATGTSVAAQILPIGILAALVYHRNGNLNIKYALIIAVG 82

Query: 107 LPITTVVTSLMIS--HVDKSFLNKAFAIFCLLMGILMLKRD 145
           L +     +L  +   +    + K + IF L++GI  L  +
Sbjct: 83  LIVGNFFGALFANQPFISSELMKKLYGIFVLMIGIRYLLSN 123


>gi|332530480|ref|ZP_08406421.1| hypothetical protein HGR_11127 [Hylemonella gracilis ATCC 19624]
 gi|332040049|gb|EGI76434.1| hypothetical protein HGR_11127 [Hylemonella gracilis ATCC 19624]
          Length = 249

 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 75/210 (35%), Gaps = 19/210 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           +  V  +  + +A F +G + G  G G  L   P LS  F    I   +         +G
Sbjct: 2   EGSVWTLAFVGLAIFAAGVMRGFSGFGAALFATPALSLVFPPAAIAPVM---------MG 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           +   + + +      H  I  + +   +    +     + ++  V       A  +  L 
Sbjct: 53  LQVFSGLQTLRTDWPH--ILWRRVGPLLACSVLVAPFGAWLLVGVPADAGRLAIGVIVLA 110

Query: 137 MGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
             +L+L   R     + P      + G  +G L+G   +GG       ++ Y  S + A 
Sbjct: 111 TALLLLSGWR---AARAPGPVATALAGGGSGLLNGFSAMGG-----PPLVAYFLSGHFAA 162

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           + +      +     +V + + + L+G+P 
Sbjct: 163 SAARASMTFVFLGQNIVSLATIFALDGVPA 192


>gi|254431549|ref|ZP_05045252.1| membrane protein [Cyanobium sp. PCC 7001]
 gi|197626002|gb|EDY38561.1| membrane protein [Cyanobium sp. PCC 7001]
          Length = 266

 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 66/172 (38%), Gaps = 15/172 (8%)

Query: 39  LFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           + G GG ++++P+L            +    A+  SL V+A  ++ +   + R   + ++
Sbjct: 1   MLGAGGSILLLPLLVS-------GAGLPTRQAVPLSLIVVALLALGNVGPYLRRRQVALR 53

Query: 99  ILKDWIFVLPITTVVTSLM--ISHVDKSFLNKAFAIFCLLMGILMLKRDRLY-CERKFP- 154
                 F     + +   +     + ++     F +  L+   L+ +R R        P 
Sbjct: 54  PALILGFPALAGSWIGGSLVRAGLIPEAVQLGVFTLAALVASWLLTRRRRPRDANTPMPP 113

Query: 155 ---DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGV 202
                    + G+V G L+G  GVGGG      ++   G  +  A+ TS  +
Sbjct: 114 AGGGAPALALQGVVVGLLTGVAGVGGGFAIVPALVLIAGLPMALASGTSLVL 165


>gi|213026613|ref|ZP_03341060.1| hypothetical protein Salmonelentericaenterica_30875 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 111

 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 45/106 (42%), Gaps = 9/106 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            + ++   + L+G +  + G GGGL+ +P L        +   +    A+ T+       
Sbjct: 14  LLVVLFFVAVLAGFIDSIAG-GGGLLTIPAL--------MAAGMSPANALATNKLQACGG 64

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           S+ S +   R   +N+   K  I +  I ++  +L++ HV    L 
Sbjct: 65  SLSSSLYFIRRKVVNLAEQKLNILMTFIGSMSGALLVQHVQADILR 110


>gi|298246061|ref|ZP_06969867.1| major facilitator superfamily MFS_1 [Ktedonobacter racemifer DSM
           44963]
 gi|297553542|gb|EFH87407.1| major facilitator superfamily MFS_1 [Ktedonobacter racemifer DSM
           44963]
          Length = 859

 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 57/187 (30%), Gaps = 13/187 (6%)

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK-------- 128
            +  T++   +   +     +      +    +  VV   ++  V   +  +        
Sbjct: 131 TVVVTALPQVITDLKLSLTQLDHASWIVSAYLLGFVVAMPLMGRVSDIYGRRRIFQICLA 190

Query: 129 AFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGAL--GVGGGIFTNLLML 186
            F I   L  I  L   R       P        G +   +S      +GGG    + M 
Sbjct: 191 IFGIGSFLCAIAPLLGQRFPLGFLQPLGIDTSSSG-LIWLISARFFQAIGGGALVPVAMA 249

Query: 187 FYG-ASIYKATATSAGV-SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
             G     K    + G+  A+      L  +Y    +  L   ++ ++NI  V +++  +
Sbjct: 250 IAGDFYTQKRLGIALGIIGAVTEIGGALGPLYGALVVEHLGWQAIFYLNIPIVGVLMAGT 309

Query: 245 ILITPLA 251
               P  
Sbjct: 310 WFCIPKG 316


>gi|294944267|ref|XP_002784170.1| cgmp-dependent protein kinase, putative [Perkinsus marinus ATCC
           50983]
 gi|239897204|gb|EER15966.1| cgmp-dependent protein kinase, putative [Perkinsus marinus ATCC
           50983]
          Length = 311

 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 42/128 (32%), Gaps = 9/128 (7%)

Query: 41  GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT-----I 95
           G+GGG++ VPVL       G+       ++           ++ +  E           I
Sbjct: 4   GIGGGVLFVPVLRLI---GGLQLKESTALSQALIASASLAATLFNCFEQYSARNDPKALI 60

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD 155
               +   +    I +++   + S +   F+   +  F   +G  M  R  +   +    
Sbjct: 61  VWPFVILTLPCTVIGSLIGVYLYSWLPSLFILILYFCFV-CLGSFMAYRKGIRLWKAENG 119

Query: 156 NYVKYIWG 163
              + + G
Sbjct: 120 AKRRAVDG 127


>gi|53804540|ref|YP_113581.1| hypothetical protein MCA1111 [Methylococcus capsulatus str. Bath]
 gi|53758301|gb|AAU92592.1| putative membrane protein [Methylococcus capsulatus str. Bath]
          Length = 264

 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 44/120 (36%), Gaps = 6/120 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++   + G L  L  VG G +    L   +        +     +GT L    P + 
Sbjct: 151 ALTVLVGVILGVLVTLSSVGAGALGTVALLFLY------PRLATVRVVGTDLAHAIPLTA 204

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + H   G ++  +L   +        + S + + + +  L  A A   LL+G   + 
Sbjct: 205 VAGLGHLHMGNVDFTLLGSLLLGSLPGIYLGSQLSAKIPEWLLRPALASLLLLIGCKFVL 264


>gi|33865991|ref|NP_897550.1| hypothetical protein SYNW1457 [Synechococcus sp. WH 8102]
 gi|33638966|emb|CAE07972.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
          Length = 262

 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 90/258 (34%), Gaps = 27/258 (10%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           + V + ++  LS   G G GLV +P L            +    A+ T         V +
Sbjct: 11  LAVIAVIANALSAFAGGGAGLVQLPALILL--------GLPFASALATHKVASVALGVGA 62

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
              H R  ++N  +    +        + +  +  +   F   A     L +G+   +R 
Sbjct: 63  AGRHWRASSLNRSLSGLILLAGLPGVWLGANAVLAIPDRFATAALGFLTLGLGVYSARRS 122

Query: 146 RL-YCERKFPDNYVKYIWG----MVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATS 199
            L   +   P N      G       G L+G+L  G G+F  L ++ ++G S  +A A  
Sbjct: 123 ELGRTDNPAPLNTRTIAIGAAVLFGIGILNGSLTSGTGLFVTLWLVRWFGLSYSRAVA-- 180

Query: 200 AGVSALIAFPALLVRIYSGWGLNG-LPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
                       L+ +  GW  +G L     G ++   +  ++  S++   L   LS + 
Sbjct: 181 ----------HTLILVGLGWNGSGALVLGFSGEIHWAWLPALIAGSLIGGYLGAHLSLVR 230

Query: 259 GKKYLTIGFSMIMFTTSF 276
           G   +   F  +      
Sbjct: 231 GSGMVKRAFEALALLMGA 248


>gi|86751414|ref|YP_487910.1| hypothetical protein RPB_4312 [Rhodopseudomonas palustris HaA2]
 gi|86574442|gb|ABD08999.1| Protein of unknown function DUF81 [Rhodopseudomonas palustris HaA2]
          Length = 276

 Score = 38.1 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 64/207 (30%), Gaps = 14/207 (6%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A    L V+    ++S   +RRH   + + LK  +        +     S V    +   
Sbjct: 69  AAALLLPVLISQDMISLYVYRRHW--DARSLKIMLPGALAGMGLAWWTASIVSDDVVRLI 126

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
                +   + +  R +L   +          WG V+GF S  +  GGG    + ML   
Sbjct: 127 VGGVGVAFVLNVWLRPQLSPAKG--STAAGVFWGGVSGFTS-FMTQGGGPPYQVYMLPQQ 183

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
                   T+    A++    +   I  G              N+   + +LP++     
Sbjct: 184 LPKLVLVGTTTIFFAILNVLKIGPYILLGQFNTA---------NLATSIALLPLAAAANL 234

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSF 276
               L   +          +++F  S 
Sbjct: 235 AGIWLIRRMPTALFYRIAYVLLFVVSL 261


>gi|16264025|ref|NP_436817.1| hypothetical protein SM_b20287 [Sinorhizobium meliloti 1021]
 gi|15140149|emb|CAC48677.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti 1021]
          Length = 235

 Score = 38.1 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 56/189 (29%), Gaps = 17/189 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I ++   + +S  + G  G+G  L++ PV+      +     +              
Sbjct: 3   LGLIAILSAVTLVSSFIQGALGIGFALIVAPVVGILKPDLLPVTLLL------------L 50

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              +   +  R    ++    K         T     +++ +    L+ A   F ++   
Sbjct: 51  MLPLNFHVAWRERSAVDWSGAKWITLGRFAGTFAGVWLLAALSTQQLDLAVGWFTVIAAA 110

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L           P        G+ TG    A G+GG     L     G  +    A  
Sbjct: 111 AALFAPPFE-----PGRPSALGVGLFTGVTETATGIGGPPLALLYQHAQGPILRATVAVC 165

Query: 200 AGVSALIAF 208
             V  +++ 
Sbjct: 166 FFVGEIMSL 174


>gi|319948028|ref|ZP_08022204.1| hypothetical membrane protein [Dietzia cinnamea P4]
 gi|319438317|gb|EFV93261.1| hypothetical membrane protein [Dietzia cinnamea P4]
          Length = 242

 Score = 38.1 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 78/258 (30%), Gaps = 23/258 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D I +  +    +  + G  G G  L+  P++  A   +     + + VA+ T +GV  
Sbjct: 1   MDLIVIAALCVAAASVIGGATGFGTSLIATPLMLTAGIGLAETVVVNLVVALITRVGVTV 60

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                     +    I+ + +            +    ++ +    L  A     +L G+
Sbjct: 61  ----------QLREHIDWRRVAVLGAASVPGAWLGVQTVTLLPDQHLKPAAGAVTILCGL 110

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M    R       P   V    G + G+ S    + G     LL+           A  
Sbjct: 111 AMALPTRHGARP--PSAAVTAAVGAIGGYFSTTTSLNG-PPVVLLLGRAKIPPTSFIADL 167

Query: 200 AGVSALIAFPA-LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           AG   + +  +  L+   +G  L GL            +   +   +    L   ++  +
Sbjct: 168 AGYFVITSIVSLALLWSGAGIDLPGL---------WPLLAACVVAGVTANQLGIAIARRL 218

Query: 259 GKKYLTIGFSMIMFTTSF 276
                     +++     
Sbjct: 219 PTHLFRSAVIVLVVIAGL 236


>gi|86158852|ref|YP_465637.1| hypothetical protein Adeh_2430 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775363|gb|ABC82200.1| protein of unknown function DUF81 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 239

 Score = 38.1 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 76/257 (29%), Gaps = 24/257 (9%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +  AS  +G ++ + G GG L+  P L  A         +    A  TS   + P  + S
Sbjct: 1   MTAASAAAGLVNAVAG-GGTLLTFPALMLA--------GLSPVTANATSTVALWPGQISS 51

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL----LMGILM 141
              +RRH                +   + S+++  + +           L    L+ +  
Sbjct: 52  VWAYRRHIEEERHRALVLGLPALLGGALGSVLLLALPEKAFAAVVPWLILFACALLALQG 111

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
             R  +  +         +I   +     G  G G GI            +  A      
Sbjct: 112 PIRRAVGHQVAGNHPVALWIIQFLISVYGGYFGAGIGIL-----------MLAAMGILLP 160

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
            S   A    ++      G+  +   + G V+     ++   S++       L+  +   
Sbjct: 161 SSLQHANALKVLFALLTNGVACVLFLAWGKVDPPLAALMAVASLVGGWAGAHLAQRLPPA 220

Query: 262 YLTIGFSMIMFTTSFVF 278
            +      I    +  F
Sbjct: 221 GMKAFAIAIGLFAAAKF 237


>gi|76802928|ref|YP_331023.1| hypothetical protein NP4590A [Natronomonas pharaonis DSM 2160]
 gi|76558793|emb|CAI50386.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160]
          Length = 336

 Score = 38.1 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 32/76 (42%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            + +  A+GTSL     +  +    +   G I++ ++   +    +   + S   ++VD+
Sbjct: 211 GVPLAAAVGTSLFGALMSGAVGAFTYGLSGVIDLGVVTALLVGSALGARIGSAATAYVDE 270

Query: 124 SFLNKAFAIFCLLMGI 139
             +   F +  LL  I
Sbjct: 271 DDVTIYFGVMLLLASI 286


>gi|328951373|ref|YP_004368708.1| protein of unknown function DUF81 [Marinithermus hydrothermalis DSM
           14884]
 gi|328451697|gb|AEB12598.1| protein of unknown function DUF81 [Marinithermus hydrothermalis DSM
           14884]
          Length = 251

 Score = 38.1 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 76/253 (30%), Gaps = 28/253 (11%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
             L     GL GVG G +  P+L  A         +    A+GT+L   A   +++   +
Sbjct: 6   GLLIALGVGLSGVGAGTLTAPLLILAL-------GVPPAEAVGTALVYGALAKLLAGGVY 58

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS------FLNKAFAIFCLLMGILMLK 143
              G ++  +L   +       V+ SL +  +          L    A   L      L 
Sbjct: 59  LARGQVDAGVLGRMLLGGVPGVVLGSLFLDRLKAQGGVVLAVLGGTVAFSALWGLGRALS 118

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
              +   R        +  G+  GF S   G    + T LL+     +  +   T     
Sbjct: 119 GRAVPKARPHLIPLGAFGIGLEMGFASAGAGA---LGTLLLLGTTRLAPARVVGTDLAFG 175

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
            + A               G     +G VN+  +  +     +       L+  I  + L
Sbjct: 176 LVAATVG------------GGLHLGMGNVNLPLLAELALGGSVGAVAGAFLAGRIPARPL 223

Query: 264 TIGFSMIMFTTSF 276
            +G    +     
Sbjct: 224 RLGLLAWLVLVGA 236


>gi|289548722|ref|YP_003473710.1| hypothetical protein Thal_0951 [Thermocrinis albus DSM 14484]
 gi|289182339|gb|ADC89583.1| protein of unknown function DUF81 [Thermocrinis albus DSM 14484]
          Length = 248

 Score = 38.1 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 74/197 (37%), Gaps = 12/197 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             +++ ASFL+G  + + G GG L+  P L       G+D       A  T+   +    
Sbjct: 7   FLVVLGASFLAGVTNAVAG-GGTLLTFPALMLV----GVDPVS----ANVTNTVALWTGP 57

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +      RR      +++   + +    ++V +L++ +   S   K      L   +L++
Sbjct: 58  MAGAWAFRRRLPETKQLIPSMVLISATGSIVGALLLLYTPSSIFKKLVPFLILFATLLLV 117

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA-SIYKATATSAG 201
              R +   +  +  V  +   +        G G GI     +   G   I+ A +    
Sbjct: 118 LSGRFHLSER--NKPVALLIQFLAAVYGAYFGAGLGIMVLATLSLLGVKDIHAANSLKNM 175

Query: 202 VSALIAFPALLVRIYSG 218
           +  LI   A ++ + SG
Sbjct: 176 LGFLINGIAAILFVLSG 192


>gi|33599975|ref|NP_887535.1| hypothetical protein BB0987 [Bordetella bronchiseptica RB50]
 gi|33567573|emb|CAE31486.1| putative membrane protein [Bordetella bronchiseptica RB50]
          Length = 246

 Score = 38.1 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 75/250 (30%), Gaps = 21/250 (8%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
             A  L   + G+ G G  LV+VP+L+  + L  +            +L ++        
Sbjct: 8   ACAVLLGYVVLGITGFGSALVVVPLLAWRWPLPEVV-----------ALTLLLDVMASLL 56

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           +       ++   L+  +  +    +    +   +D S+      ++   +G   L+   
Sbjct: 57  LGGLNLRQVDFAELRRLLPGMVAGALAGLWLSRSLDASWPLLVLGLYVAAVGAQALRPRP 116

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
                     +         G +    G  G     L++ +    +    A  A    +I
Sbjct: 117 ARPRPPAAAPWALAAG-GAIGVVEMLFGTAG----PLVVAWLSRRLPDVHALRASTPVVI 171

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
              A  V +  GW      P         A++ +    +L   L  + +  +    L   
Sbjct: 172 TVSACSVLLAMGWAGRLSQPELW--TRWLALVGVAAGGVL---LGHRWARHVSPAALRKL 226

Query: 267 FSMIMFTTSF 276
              ++  +  
Sbjct: 227 ICGLLVVSGL 236


>gi|240118582|ref|ZP_04732644.1| hypothetical protein NgonPID_09004 [Neisseria gonorrhoeae PID1]
          Length = 176

 Score = 37.7 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 59/171 (34%), Gaps = 17/171 (9%)

Query: 112 VVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM----VTG 167
           +V +L +S V K  L     +  + + +  +   +L   ++       +++G+    + G
Sbjct: 1   MVGALSVSLVSKDILLAVVPVLLIFVALYFVFSPKLDGSKEGKARMSFFLFGLTVAPLLG 60

Query: 168 FLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           F  G  G G G  F    ++  G  +  A + +   +      +L V +  G        
Sbjct: 61  FYDGVFGPGVGSFFLIAFIVLLGCKLLNAMSYTKLANVACNLGSLSVFLLHGS------- 113

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                +    V  +   + +   L  + +   G K +     +I  + +  
Sbjct: 114 -----IIFPIVATMAVGAFVGANLGARFAVRFGSKLIKPLLIVISISMAVK 159


>gi|182437123|ref|YP_001824842.1| putative serine protease [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|326777733|ref|ZP_08236998.1| peptidase S1 and S6 chymotrypsin/Hap [Streptomyces cf. griseus
           XylebKG-1]
 gi|178465639|dbj|BAG20159.1| putative serine protease [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|326658066|gb|EGE42912.1| peptidase S1 and S6 chymotrypsin/Hap [Streptomyces cf. griseus
           XylebKG-1]
          Length = 401

 Score = 37.7 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 6/138 (4%)

Query: 11  MVFLSKDCVVDYICLIIVA---SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
           M  L    ++  +   ++     F+ G LS +  +GGGLV V +L   +  +  D  +  
Sbjct: 1   MNVLDILLLLAAVWFAVIGYRQGFVVGILSVIGFLGGGLVAVYLLPVIWDRLTEDAEVST 60

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
            VA+G  + VI   SV           +   I   W     +       +++ V    + 
Sbjct: 61  AVAIGAVVIVIVCASVGQAFTTHLGNRLRRYI--TWSPARALDA-TGGALVNVVAMLLVA 117

Query: 128 KAFAIFCLLMGILMLKRD 145
               +      +  L ++
Sbjct: 118 WMIGLLLAGTSLPTLGKE 135


>gi|170732169|ref|YP_001764116.1| hypothetical protein Bcenmc03_0816 [Burkholderia cenocepacia MC0-3]
 gi|169815411|gb|ACA89994.1| protein of unknown function DUF81 [Burkholderia cenocepacia MC0-3]
          Length = 262

 Score = 37.7 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 78/245 (31%), Gaps = 31/245 (12%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L   F        +    A+GT L   A T     + H   G+I+ +I       
Sbjct: 31  LMTPILVLLF-------GVHPATAVGTDLLYAAATKATGTLVHGLKGSIDWRITSRLAAG 83

Query: 107 LPITTVVTSL------MISHVDKSFLNKAFAIFCLLMGILMLKRD--------RLYCERK 152
                 +T        M +      +     +  LL  + ++ R                
Sbjct: 84  SVPAAALTLWWLHTHGMNTPGTARMIQLVLGVALLLTSLALIFRPQLTAFAARNPLAPSP 143

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
               +   + G V G L     VG G     ++L     +    AT+  V + IA    L
Sbjct: 144 ARTLWSTVLTGAVLGVLVSMTSVGAGAIGVTVLLLLYPLL----ATTRIVGSDIAHAVPL 199

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
                   + G+  W LG V+   +L +L  S+    + + LS    ++ L    +  + 
Sbjct: 200 TL------VAGMGHWLLGSVDWSMLLSLLLGSLPGIVIGSLLSARAPERLLRNLLASTLV 253

Query: 273 TTSFV 277
                
Sbjct: 254 AVGVR 258


>gi|148555685|ref|YP_001263267.1| hypothetical protein Swit_2774 [Sphingomonas wittichii RW1]
 gi|148500875|gb|ABQ69129.1| protein of unknown function DUF81 [Sphingomonas wittichii RW1]
          Length = 259

 Score = 37.7 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 77/232 (33%), Gaps = 27/232 (11%)

Query: 39  LFGVG-GGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           L G+G GG +    L+     M +        A    L ++     +     RR  + + 
Sbjct: 23  LLGLGKGGFIGFSTLAMPLVAMAVPPVQ----AAAILLPLMIAQDAVGVWAFRR--SWDR 76

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML---KRDRLYCERKFP 154
            ++   +    +  ++  +  + + ++++  A  +  +L G   L   +       R  P
Sbjct: 77  HVMLVMLPGAVLGILLGYVFAASLPEAWILLALGLISILFGAQRLWVERGGTPAPARVLP 136

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY---GASIYKATATSAGVSALIAFPAL 211
           D+   ++    +G  S     G         L+             T+A   AL+ +  +
Sbjct: 137 DSVG-FLCATASGLTSQIAHAG----APPYQLWVFPQKLPRDVLVGTTAIFFALMNWIKV 191

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
              +  G             VN+ A   +LPI+ L T    +L   I  +  
Sbjct: 192 PAYVALGQFTP---------VNLLASAALLPIATLSTFAGVRLVRRIDPERF 234


>gi|75910807|ref|YP_325103.1| hypothetical protein Ava_4611 [Anabaena variabilis ATCC 29413]
 gi|75704532|gb|ABA24208.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
          Length = 123

 Score = 37.7 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 10/101 (9%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV-IAPTSVMSFMEHRRHGTINMKILKDWI 104
            +MVP +     L           A GTS+   I P  ++    + R G IN K      
Sbjct: 28  AIMVPAMVLLMGLD-------QKFATGTSIAAQILPIGLLGAAVYHRSGNINFKYAVIIA 80

Query: 105 FVLPITTVVTSLMIS--HVDKSFLNKAFAIFCLLMGILMLK 143
             L +  +  ++  +   +    + K + IF L +G   L 
Sbjct: 81  VGLLVGNLFGAMFANQPFITSETMKKLYGIFLLAIGFRYLL 121


>gi|294944273|ref|XP_002784173.1| hypothetical protein Pmar_PMAR003428 [Perkinsus marinus ATCC 50983]
 gi|239897207|gb|EER15969.1| hypothetical protein Pmar_PMAR003428 [Perkinsus marinus ATCC 50983]
          Length = 78

 Score = 37.7 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 32/71 (45%)

Query: 164 MVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNG 223
            V G ++  +G+GGG+  N L+L  G    ++TAT+A V    +    +  I     L  
Sbjct: 3   SVIGLIASMVGIGGGLLMNPLVLSLGLDPKQSTATTAIVIFATSTSGTITVISGIISLVH 62

Query: 224 LPPWSLGFVNI 234
              + + F  I
Sbjct: 63  DADFFIFFRYI 73


>gi|23015004|ref|ZP_00054795.1| COG0730: Predicted permeases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 261

 Score = 37.7 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 38/123 (30%), Gaps = 6/123 (4%)

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP--- 154
            I+ + +          +     +    L +  A+  +++   +L       +       
Sbjct: 78  DIIINILAGSMAGAWFGAGWAMRLKSDGLYRIIAVLLVIIAGALLFGHDATGQGVPLFSG 137

Query: 155 --DNYVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
                   + G   G ++  LGV GG +    L+L +G  I  A + S  +S        
Sbjct: 138 TVQIVAGVLAGFAIGIVASLLGVAGGELLIPTLVLLFGLDIKLAGSLSLAISLPTMIVGF 197

Query: 212 LVR 214
              
Sbjct: 198 SRY 200


>gi|294012534|ref|YP_003545994.1| putative permease [Sphingobium japonicum UT26S]
 gi|292675864|dbj|BAI97382.1| putative permease [Sphingobium japonicum UT26S]
          Length = 269

 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 49/119 (41%), Gaps = 5/119 (4%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++A  L G +  L  VG G +   +L   + L      + M   + T +    P ++
Sbjct: 155 ALTMLAGALLGAMVTLTSVGAGAIGATLLLALYPLR-----MRMQRLVATDIVHAVPLTL 209

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++ + H   G +N  +L + +       V+ SL+ +      L    A   +++G  ++
Sbjct: 210 VAGLGHLWIGNVNPVLLVNLLAGSLPGIVIGSLLATRASDRVLQPLLAAVLVVVGWRLI 268


>gi|297203916|ref|ZP_06921313.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
 gi|197713107|gb|EDY57141.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
          Length = 257

 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 51/155 (32%), Gaps = 8/155 (5%)

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
               +    + G  L ++    V++ + +RRH       L      + +  V  +L +  
Sbjct: 42  FAAVLPARASTGALLPILIAGDVLAVLTYRRHAH--WPTLWRLFPAVAVGVVAGTLFLQW 99

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM------VTGFLSGALG 174
            D   +  +     L M  + + R R     + PD+       +      V G  +  + 
Sbjct: 100 ADDGIVRTSIGAILLFMAAVTVWRRRTADTDEEPDSVATRTGRVKARSYGVLGGFTTMVA 159

Query: 175 VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
             GG   ++ +L  G        TSA    ++   
Sbjct: 160 NAGGPVMSMYLLSAGFRKLGFLGTSAFFFLIVNVS 194


>gi|145588717|ref|YP_001155314.1| hypothetical protein Pnuc_0530 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047123|gb|ABP33750.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 261

 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 53/184 (28%), Gaps = 10/184 (5%)

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
             N +ILK  +    +   +     + +    L  +  IF LL  +  L           
Sbjct: 81  NANWRILKLILPPAIVGLALGMFFFTAITPKVLTLSIGIFTLLFLMQNLAMTYFDSREAK 140

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
           P  ++    G+ +GF S    +GG   T  ++      +     TS              
Sbjct: 141 PYPWLGRAMGLTSGFTSFVAHIGGPPITVFMLRENLLPM---VYTST-------LGVFFT 190

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            I  G          L F  +   L++LP           L+  I  K+        +  
Sbjct: 191 FINFGKLGPYAYLELLNFQQLATSLLLLPCVPFGVYFGFYLAKRISMKWYYHIVRFFLLV 250

Query: 274 TSFV 277
            S  
Sbjct: 251 ASIK 254


>gi|73661460|ref|YP_300241.1| permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
 gi|72493975|dbj|BAE17296.1| putative permease [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 216

 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 67/195 (34%), Gaps = 18/195 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            LI+ A FL G +   FG G  LV +P+L+     +             TS+ VI    +
Sbjct: 6   VLILFAIFLGGLVRTYFGFGEALVSMPLLTLIGLDIH------------TSVSVIGLAGI 53

Query: 84  --MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              SF        I  ++L   +    +   +   +++ V+ S +     +F    G   
Sbjct: 54  LVASFNIFLDFKNIEYRLLAALLIGSFLGVPLGIWILNFVNTSVVQWLLGLFLFSYGTYA 113

Query: 142 LKRD---RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
             R    +   +          + G+++G L        G+   +     G S+   ++T
Sbjct: 114 FLRKVYFKNKAKMILKSKAWAGLTGIISGVLGSLYN-SHGVPVVIYSTLTGLSVKTLSST 172

Query: 199 SAGVSALIAFPALLV 213
                 + A   ++ 
Sbjct: 173 IQVHFLITAILVVIG 187


>gi|269926005|ref|YP_003322628.1| protein of unknown function DUF81 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789665|gb|ACZ41806.1| protein of unknown function DUF81 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 271

 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 89/271 (32%), Gaps = 28/271 (10%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
           S    V  + ++  A+ ++G ++ + G GG L+  P L            +    A  T+
Sbjct: 17  SVPTSVRSLLILATAALIAGAINAIAG-GGSLITFPALLAV--------GLPSVTANVTN 67

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
              + P ++   + +RR      K +     V  +  ++ S ++    +S  +       
Sbjct: 68  TVALWPGTIGGSVAYRRELRCQSKRIWILGTVGFVGGLLGSFILLISPQSVFDLIVPFLI 127

Query: 135 LLMGILMLKRDRLYC--------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML 186
           L    L+L + R+          + +   +    +   +     G  G G GI T  ++ 
Sbjct: 128 LFACGLLLVQKRIAKWILTSRDGKGENLLSPGILLGQFLAAVYGGYFGAGLGIITLAILG 187

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISIL 246
            +     +            A   +L  I +G  +  L     G V     L++   S  
Sbjct: 188 LFLDDDLQRI---------NALKGVLTLIING--IAALYFAVFGNVVWPLALLMAVCSWT 236

Query: 247 ITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              L  +++  +    L +   +     S  
Sbjct: 237 GGFLGVRVARRLNPDVLRLLVVIYGIVVSIR 267


>gi|303281764|ref|XP_003060174.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458829|gb|EEH56126.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 70

 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 25/69 (36%)

Query: 78  IAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
           + P S  + + HRR G ++ ++         + + + S +     +  L   F    L +
Sbjct: 1   MLPPSAAALVAHRRLGNVDARMGAALAVGTALGSALGSSVAVDAPRGALELMFMGGMLFL 60

Query: 138 GILMLKRDR 146
                +  R
Sbjct: 61  SYRTFRTVR 69


>gi|320156549|ref|YP_004188928.1| putative permease [Vibrio vulnificus MO6-24/O]
 gi|319931861|gb|ADV86725.1| predicted permease [Vibrio vulnificus MO6-24/O]
          Length = 252

 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 74/208 (35%), Gaps = 24/208 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L+  A    G L+ + G GG  +  P L       GI       VA  T+        
Sbjct: 3   IILLFFAGVFGGMLNSIAG-GGSFITFPALMAV----GIPPV----VANATNTFASCAGY 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +     +RR       IL   I    +  ++ + ++ +  +S   KA     L   IL +
Sbjct: 54  ISGAWGYRRELYAQKNILLKTIVCSLLGGMLGAFLLLNTSESDFLKAIPWLLLFATILFV 113

Query: 143 KRDRLYCE--------RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
              R+           +     ++  ++ ++     G    G GI T   +   G   ++
Sbjct: 114 FGGRINQAIGHRADRPKHPIILWLPALFLVLVSAYGGFFNAGLGIVTLSYLTLSG---HR 170

Query: 195 ATATSAGVSALI----AFPALLVRIYSG 218
              T  G+  LI    +  A+++ I++G
Sbjct: 171 DIITMNGLKLLISTSVSLIAVVIFIFNG 198


>gi|290955605|ref|YP_003486787.1| hypothetical protein SCAB_10421 [Streptomyces scabiei 87.22]
 gi|260645131|emb|CBG68217.1| putative membrane protein [Streptomyces scabiei 87.22]
          Length = 250

 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 8/97 (8%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG-TINMKILKDWIFVL 107
           VP L           +  M  A+GTSL VI+  S+ S +        ++  ++  +    
Sbjct: 158 VPALVTVL-------AFEMQAAVGTSLLVISANSLASLVTRGATTVGVDWAVIGPFTGAA 210

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +       + + V    L + FA+  L +  LML  
Sbjct: 211 VLGAWDGRRLAAKVTGPLLQRTFAVLLLAVAALMLID 247


>gi|302847194|ref|XP_002955132.1| hypothetical protein VOLCADRAFT_106659 [Volvox carteri f.
           nagariensis]
 gi|300259660|gb|EFJ43886.1| hypothetical protein VOLCADRAFT_106659 [Volvox carteri f.
           nagariensis]
          Length = 437

 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 48/113 (42%), Gaps = 2/113 (1%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           ++ + +   G + G+ G G  ++ + ++  AF   G++        +  S G I    + 
Sbjct: 14  VLSLGAVCGGVVKGVTGFGNAIINL-LVWVAFTAAGVNAGPLQLAVLADSFGCIVC-GIP 71

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
             +    H T + +++   +      + + + +++H+   ++  A A   LL+
Sbjct: 72  LLVMTSAHKTADWRLVIAILIFASAGSPLGAELLTHLAVRWVELAMACVLLLV 124


>gi|212636454|ref|YP_002312979.1| hypothetical protein swp_3708 [Shewanella piezotolerans WP3]
 gi|212557938|gb|ACJ30392.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 287

 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 91/274 (33%), Gaps = 39/274 (14%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
             +    +    +   G GGG++ +P+ +           +    A+ TS  +       
Sbjct: 30  YFLFLGIIGAIFANTTGAGGGVIFIPIFNSL--------ELSELQALSTSFAIQCFGMTA 81

Query: 85  SFME-------HRRHGTINMKILKDWIFVLPITTVVTSL-------MISHVDKSFLNKAF 130
             +          +HG+  +        ++    +  S+       + +      +   F
Sbjct: 82  GTLTWWRYYKEKIKHGSQQISSEWSQYPIILKCCIPASIAGLWLCQLANLQPPQSMPFTF 141

Query: 131 AIFCL----LMGILMLKRDRLYCERKFPDNYVKYI--WGMVTGFLSGALGVGGGIFTNLL 184
            +F +    ++G+  + R++   ++      +  I     + G ++G L VG G    + 
Sbjct: 142 GVFSIVLGVILGLNSIYRNKYSGDQVLSKKGLYTIVLVSFLGGIITGWLSVGVGELIVIY 201

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +L    +   A A  AGV+   A       I+                    VL   P +
Sbjct: 202 LLLKRTAPIVAIA--AGVTVSAATVWASAYIHFTPSAQT---------YFQIVLFAGPGA 250

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           IL   LA ++  ++  K L + FS  + ++    
Sbjct: 251 ILGGLLARRIVTLLSIKNLKLVFSCWIISSGIFM 284



 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 9/119 (7%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           I++ SFL G ++G   VG G ++V  L                VA+   + V A T   S
Sbjct: 176 IVLVSFLGGIITGWLSVGVGELIVIYLLL--------KRTAPIVAIAAGVTVSAATVWAS 227

Query: 86  FMEHRRHGTIN-MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              H         +I+        +  ++   +++ +    L   F+ + +  GI ML 
Sbjct: 228 AYIHFTPSAQTYFQIVLFAGPGAILGGLLARRIVTLLSIKNLKLVFSCWIISSGIFMLL 286


>gi|191636855|ref|YP_001986021.1| hypothetical protein LCABL_00310 [Lactobacillus casei BL23]
 gi|190711157|emb|CAQ65163.1| Putative uncharacterized protein [Lactobacillus casei BL23]
 gi|327380895|gb|AEA52371.1| Membrane protein, putative [Lactobacillus casei LC2W]
 gi|327384059|gb|AEA55533.1| Membrane protein, putative [Lactobacillus casei BD-II]
          Length = 295

 Score = 37.7 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 50/142 (35%), Gaps = 9/142 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
                +++A   +G  S L G+   LV  P L       G+       +A  T+   +  
Sbjct: 4   SIFAFLLIAGIGAGLTSTLAGL-ASLVSYPALLAI----GVPPV----IANVTNTAALVF 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T V S +          K L   I ++ + ++  S ++     +   K    F +   +L
Sbjct: 55  TGVGSAVSSLPELRGRGKFLWRLILLVSLGSIFGSALLLIAPAATFEKVVPFFIIAASLL 114

Query: 141 MLKRDRLYCERKFPDNYVKYIW 162
           +L   RL  +   P    + + 
Sbjct: 115 LLFSGRLPTQEHRPGEPARTLT 136


>gi|260590126|ref|ZP_05856039.1| putative membrane protein [Blautia hansenii DSM 20583]
 gi|260539638|gb|EEX20207.1| putative membrane protein [Blautia hansenii DSM 20583]
          Length = 209

 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 42/134 (31%), Gaps = 11/134 (8%)

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVD---------KSFLNKAFAIFCLLMGILMLKR 144
            I  K          +  ++   M S V           +       +  +   +  L +
Sbjct: 16  NIEQKTGLPLALGAAVGGLLGKWMFSFVSSLSPDKNKVGAVQAACLMLVTVGTLVYTLYK 75

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT-NLLMLFYGASIYKATATSAGVS 203
           +R+       +       G+  G LS  LG+GGG     +L  F+  +   A   S  + 
Sbjct: 76  ERIK-TYHVTNLMACVAIGIFLGILSSFLGIGGGPINLVVLFFFFSMTTKIAAENSLYII 134

Query: 204 ALIAFPALLVRIYS 217
                 +LL  I +
Sbjct: 135 FFSQIASLLSSIVT 148


>gi|33863202|ref|NP_894762.1| hypothetical protein PMT0930 [Prochlorococcus marinus str. MIT
           9313]
 gi|33635119|emb|CAE21105.1| Domain of unknown function DUF81 [Prochlorococcus marinus str. MIT
           9313]
          Length = 279

 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 60/155 (38%), Gaps = 17/155 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++     +G L+ L    G  + +P+L       G+       VA GT+   +   S
Sbjct: 35  VSVLLAGGAFAGALNTL-ASSGSAITLPLLIVL----GVPPG----VANGTNRLGVLLGS 85

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN------KAFAIFCLL 136
           + + +  ++ G+I  +        L +  ++ +   ++++   +          A+  L+
Sbjct: 86  LSAVISFQKSGSIPWRKTFTLSAPLAVGAIIGARAATYLNDERIQLTINMAIIAALVVLV 145

Query: 137 MGIL--MLKRDRLYCERKFPDNYVKYIWGMVTGFL 169
           +G    +  R+    +         ++ G  TGF+
Sbjct: 146 IGSKRFLFLRESRQNKESIFMLPCIFLVGFWTGFI 180


>gi|302391989|ref|YP_003827809.1| hypothetical protein Acear_1225 [Acetohalobium arabaticum DSM 5501]
 gi|302204066|gb|ADL12744.1| protein of unknown function DUF81 [Acetohalobium arabaticum DSM
           5501]
          Length = 250

 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 92/244 (37%), Gaps = 17/244 (6%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           +  ++ A   +G ++ L G GG L+ +  L            +   VA GT+   I   +
Sbjct: 6   VLTVLFAGTAAGFINTLAG-GGSLIAMSALIFM--------GLPSAVANGTNRIAILIQN 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +++    R+ G  + K          I  V+ S +   + ++  NK  A   +L+ IL++
Sbjct: 57  IVAVTNFRQKGFSDFKFSFKLSIPTIIGAVIGSNLAVDLPEALFNKILAGIMILILILII 116

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
              +   E              +  F    +G+ GG     +   +  ++   T  S   
Sbjct: 117 VDPKEKMETTVEKLSSGRQLTAMVAFF--FVGIYGGFIQGGVGFLFIITLSLITGFS--- 171

Query: 203 SALIAFPALLVRIYSGWGLNGLPPWSL-GFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             L+   ++ V + + + +  L  + + G V   A LI+   + L   L +  +   G K
Sbjct: 172 --LVKVNSIKVFVIAAYTIPSLAVFVINGKVAWLAGLILAVGNSLGAYLGSNFAVSKGDK 229

Query: 262 YLTI 265
           ++  
Sbjct: 230 WIKY 233


>gi|126665286|ref|ZP_01736268.1| hypothetical conserved membrane protein [Marinobacter sp. ELB17]
 gi|126629914|gb|EBA00530.1| hypothetical conserved membrane protein [Marinobacter sp. ELB17]
          Length = 254

 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 11/153 (7%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+++  F++G + G  G G  ++M PV S           I + V + T L +  P    
Sbjct: 18  LLLLVCFVAGMVRGFSGFGSVMIMAPVFSAL-----YGPVIAVPVVVLTDLMISLPLVRS 72

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
                  +       ++  +      ++    ++  +    L    AI  L+   LM  +
Sbjct: 73  V------YKDALAATVRQMLLAAIFGSLAGFALMRMLPGDTLATLVAITVLVFVGLMALQ 126

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
            RL            Y+ G ++G      G+ G
Sbjct: 127 SRLKAAPTAATARQNYLAGSLSGLFGSISGMSG 159


>gi|87118796|ref|ZP_01074695.1| putative orphan protein; putative membrane protein [Marinomonas sp.
           MED121]
 gi|86166430|gb|EAQ67696.1| putative orphan protein; putative membrane protein [Marinomonas sp.
           MED121]
          Length = 249

 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 34/128 (26%), Gaps = 11/128 (8%)

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNY 157
            IL  + F   +  ++ S +   +D++ L     IF L M                    
Sbjct: 77  DILLAFTFGSILAAIIGSQVAVSLDETLLKVILGIFILYMVW------GPKISPVNMTRK 130

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV-----SALIAFPALL 212
            ++  G      +       G  T   M     S     AT A V        I     L
Sbjct: 131 FRFYLGGFISTFASLFIGASGPITAAFMGREKMSKEAKVATHAAVMSIQHGFKIIIFGFL 190

Query: 213 VRIYSGWG 220
              +  + 
Sbjct: 191 GFAFFDYA 198


>gi|330826783|ref|YP_004390086.1| hypothetical protein Alide2_4255 [Alicycliphilus denitrificans
           K601]
 gi|329312155|gb|AEB86570.1| protein of unknown function DUF81 [Alicycliphilus denitrificans
           K601]
          Length = 248

 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 86/261 (32%), Gaps = 22/261 (8%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++ +  +++ A  L+G L G  G+G G+++VPVL+   +  G++ +  +  A        
Sbjct: 3   LLAHAWILLPAVLLAGALIGATGIG-GVLLVPVLT---RFGGVEPAQAIAAASLAFALPA 58

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                   +   R      +     +       V  +L++  +    L        L  G
Sbjct: 59  LV-----ALRPLRRDPALARRTAPLLLGALTGAVGGALLVHALPARALLAGVTALVLFAG 113

Query: 139 ILMLKRDRLYCERKF-PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
              L       E             G++ G  S   G GG +    L++     +  A A
Sbjct: 114 WRGLAARGPGAEAAPQLPRPALAGLGLLVGVGSALTGTGGPVLLLPLLMLRRQPVQFAVA 173

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
            +  +   +A  +  V   +     GL           A+   + + +  +    +L   
Sbjct: 174 AAQAIQLPVALTSSAVHAAAHRLDWGL-----------ALACGVVM-LAGSLAGQRLVQG 221

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           + +  L    SM++      F
Sbjct: 222 LDRHRLQRFVSMLLLAAGAWF 242


>gi|303326505|ref|ZP_07356948.1| DUF81-containing protein [Desulfovibrio sp. 3_1_syn3]
 gi|302864421|gb|EFL87352.1| DUF81-containing protein [Desulfovibrio sp. 3_1_syn3]
          Length = 237

 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 78/211 (36%), Gaps = 21/211 (9%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFME 88
           A F +G + G  G G  ++ + +L+       I               VI    + + + 
Sbjct: 2   AVFCAGLIRGATGFGFSMICIVLLTLLLPPAHIAP-------------VIVLWEIAASVG 48

Query: 89  H--RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           H    +   + K L+     + + T   +  ++    + +        L++  ++    +
Sbjct: 49  HLPFVYKEADWKALRHLALGVALGTPPGAYCLALAPAAPMTAVINTVVLVLTGMLFFGFK 108

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
           L   R+ P  +     G +TG ++GA   GG     +++ F       A + ++ ++  +
Sbjct: 109 L---RQRPGRWGACGVGALTGLINGASANGG---PPVILFFLSGPSSVAVSRASLIAFFL 162

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAV 237
               L   +Y G+GL     + L  V +  V
Sbjct: 163 FTDVLAAVVYWGYGLMTGQVFLLAAVMLPCV 193


>gi|84515877|ref|ZP_01003238.1| membrane protein, putative [Loktanella vestfoldensis SKA53]
 gi|84510319|gb|EAQ06775.1| membrane protein, putative [Loktanella vestfoldensis SKA53]
          Length = 251

 Score = 37.7 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 80/257 (31%), Gaps = 21/257 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  + I A    G   G FG G   V   +L+           +   +A+G  L +    
Sbjct: 8   FFAVGIPAIIFGGIAKGGFGSGAAFVAGAILALV---------VPPGLALGIILPLFMLV 58

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL-LMGIL 140
              +   +   G  +    K  +       ++ +++ + VD           CL      
Sbjct: 59  DAATLRPYW--GQWHWPSAKGIMQGAVPGCIIGAMLYALVDADVFRLLIGAICLAFAAFQ 116

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
           + +       R+ P +        + G  +  +   GG  T + +L  G       AT+ 
Sbjct: 117 LARALGWLMVRQMPFSRNFAWAAGLVGGFTSFISHAGGPPTAIFLLSQGLGKTAFQATTV 176

Query: 201 GVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGK 260
                I +  ++   Y G               + A  ++ P +++   +  +   ++ +
Sbjct: 177 LSFWAINWMKVVPYAYLGIFTLET---------LKASAVLAPFALIGAWIGVRAHKLVPE 227

Query: 261 KYLTIGFSMIMFTTSFV 277
           +       +++  T   
Sbjct: 228 RAFFALTYVLLVATGLR 244


>gi|326330283|ref|ZP_08196593.1| YtnM protein [Nocardioidaceae bacterium Broad-1]
 gi|325951820|gb|EGD43850.1| YtnM protein [Nocardioidaceae bacterium Broad-1]
          Length = 167

 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 61/175 (34%), Gaps = 13/175 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ + +  +    +  + G  G+  G+            + +   +   VA  +      
Sbjct: 1   MERLIIFALVGLAAQAVDGSLGMAYGV--------TSSTLLVATGVAPAVASASVHLAEV 52

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA-----IFC 134
            T+ +S + H R G ++ K++        I     + ++S++         A     +  
Sbjct: 53  GTTFVSGVSHWRLGNVDWKVVAKVAVPGGIGAFTGATVLSNISTESATPWVAGLLLLLGV 112

Query: 135 LLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
            ++   +  +  ++   + P   +    G+  GF+    G G G  T   ++  G
Sbjct: 113 YIIARFVFGKPPVFIPGRRPGLGLLAPLGLFGGFIDATGGGGWGPVTTPTLISSG 167


>gi|254246178|ref|ZP_04939499.1| hypothetical protein BCPG_00909 [Burkholderia cenocepacia PC184]
 gi|124870954|gb|EAY62670.1| hypothetical protein BCPG_00909 [Burkholderia cenocepacia PC184]
          Length = 262

 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 78/245 (31%), Gaps = 31/245 (12%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L   F        +    A+GT L   A T     + H   G+I+ +I       
Sbjct: 31  LMTPILVLLF-------GVHPATAVGTDLLYAAATKATGTLVHGLKGSIDWRITGRLAAG 83

Query: 107 LPITTVVTSL------MISHVDKSFLNKAFAIFCLLMGILMLKRD--------RLYCERK 152
                 +T        M +      +     +  LL  + ++ R                
Sbjct: 84  SVPAAALTLWWLHTHGMNTPGTARMIQLVLGVALLLTSLALIFRPQLTAFAARNPLAPSP 143

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
               +   + G V G L     VG G     ++L     +    AT+  V + IA    L
Sbjct: 144 ARTLWSTVLTGAVLGVLVSMTSVGAGAIGVTVLLLLYPLL----ATTRIVGSDIAHAVPL 199

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
                   + G+  W LG V+   +L +L  S+    + + LS    ++ L    +  + 
Sbjct: 200 TL------VAGMGHWLLGSVDWSMLLSLLLGSLPGIVIGSLLSARAPERLLRNLLASTLV 253

Query: 273 TTSFV 277
                
Sbjct: 254 AVGVR 258


>gi|284030672|ref|YP_003380603.1| hypothetical protein Kfla_2739 [Kribbella flavida DSM 17836]
 gi|283809965|gb|ADB31804.1| protein of unknown function DUF81 [Kribbella flavida DSM 17836]
          Length = 324

 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 28/101 (27%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                LM +   +     +GT L    P    + + H   G     +    +        
Sbjct: 175 LVIIALMALYPGLKASELVGTDLLQAVPLVASAALGHLLFGDFQFDLTAAMLVGCVPGVW 234

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
           + + + S      + +A A   L   + +L    L      
Sbjct: 235 IGARISSRAPGGLIRRALAFVLLASALKLLGVPNLETGVAL 275



 Score = 35.4 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 34/256 (13%), Positives = 72/256 (28%), Gaps = 44/256 (17%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M PVL   F   G+        A+ + L   A    +    H R GT+++K++      
Sbjct: 26  LMTPVLVLFF---GVPPL----TAVSSDLVASAVMKPVGAAVHLRRGTVHLKLVGWLCVG 78

Query: 107 LPITTVVTSLMISHV-----DKSFLNKAFAIFCLLMGILML----------KRDRLYCER 151
                    L+   +      + F+ +A  +  L+    +            R R     
Sbjct: 79  SIPAAFAGVLIARSLGDGENVQQFIQRALGVALLVAATGLTVRAYLRLVERARKRDGLLP 138

Query: 152 KFPDNYVKYIWGMVTGFL--------SGALGVGGGIFTNLLMLFY--GASIYKATATSAG 201
             P    +     +   L         G   VG G    + ++    G    +   T   
Sbjct: 139 PLPQGRPRVTARPLPTVLVGVIGGIVVGMTSVGSGSLVIIALMALYPGLKASELVGTDLL 198

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
            +  +   A L  +  G     L               +L   +    +  ++S      
Sbjct: 199 QAVPLVASAALGHLLFGDFQFDL------------TAAMLVGCVPGVWIGARISSRAPGG 246

Query: 262 YLTIGFSMIMFTTSFV 277
            +    + ++  ++  
Sbjct: 247 LIRRALAFVLLASALK 262


>gi|117923548|ref|YP_864165.1| multi-sensor hybrid histidine kinase [Magnetococcus sp. MC-1]
 gi|117607304|gb|ABK42759.1| multi-sensor hybrid histidine kinase [Magnetococcus sp. MC-1]
          Length = 1116

 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/97 (11%), Positives = 32/97 (32%), Gaps = 16/97 (16%)

Query: 97  MKILKD--WIFVLPITTVVTSLMI---SHVDKSFLNKAFA--------IFCLLMGILMLK 143
             +L+       + +     ++     ++   + L    A        +  ++    M+ 
Sbjct: 44  WVLLRGRHLWPGIFLGAFAGNIWAYFDTNTLSAILKSILAGSANGLGDVIAIVGAAWMIN 103

Query: 144 RDRLYCE--RKFPDNYVKYIWGMVTG-FLSGALGVGG 177
                        +  +  I+G + G F+S ++G+ G
Sbjct: 104 TISPATALFNNSKNTTIFLIYGGIIGPFISASIGIFG 140


>gi|304407996|ref|ZP_07389646.1| conserved hypothetical protein [Paenibacillus curdlanolyticus YK9]
 gi|304343015|gb|EFM08859.1| conserved hypothetical protein [Paenibacillus curdlanolyticus YK9]
          Length = 219

 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 5/50 (10%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 97  MKILKDWIFVLPITTVVTSLM---ISHVDKSFLNKAFAIFCLL-MGILML 142
           M++++ W  +L +  ++   +    + +    L   F    ++ + + ++
Sbjct: 1   MRLIRKWGILLVLGGILGVFLGYNGAELSGKTLLIIFGCVLIVALALNII 50


>gi|294944271|ref|XP_002784172.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239897206|gb|EER15968.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 180

 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 34/108 (31%), Gaps = 11/108 (10%)

Query: 41  GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT-----I 95
           G+GGG++ VPVL       G+       ++           ++ +F    R        I
Sbjct: 4   GIGGGILFVPVLRLI---GGLSQKESSSLSQALVAASALAANLFNFYAQYRAKNEPKALI 60

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSF---LNKAFAIFCLLMGIL 140
               +   +    + +++   + S +       L    A F  L    
Sbjct: 61  VWPFVILMLPCAVVGSLIGIYLYSWLPSLLQLILYFIVACFGSLAAYR 108


>gi|227879304|ref|ZP_03997171.1| integral membrane protein [Lactobacillus crispatus JV-V01]
 gi|256849128|ref|ZP_05554561.1| permease [Lactobacillus crispatus MV-1A-US]
 gi|312977963|ref|ZP_07789709.1| transport protein [Lactobacillus crispatus CTV-05]
 gi|227861099|gb|EEJ68751.1| integral membrane protein [Lactobacillus crispatus JV-V01]
 gi|256713904|gb|EEU28892.1| permease [Lactobacillus crispatus MV-1A-US]
 gi|310895270|gb|EFQ44338.1| transport protein [Lactobacillus crispatus CTV-05]
          Length = 252

 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/231 (11%), Positives = 75/231 (32%), Gaps = 21/231 (9%)

Query: 53  SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
                 +GI        A  T+   +  TS+ S +   +    + K +  +     + ++
Sbjct: 31  YPVLLAVGIPPVF----ANVTNDAALIWTSIGSTVSSTKELKGHWKQVLFYTIFTVVGSI 86

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK----YIWGMVTGF 168
           +  +++         KA   F    G++++   + +               ++  +V G 
Sbjct: 87  LGCILLLSFPPKIFEKAVPFFIAFSGLMIIVSGKHHSLNTKTQPTWLKIIYFLALLVMGM 146

Query: 169 LSGALGVGGGIFTNLLMLFYGASIYKAT-ATSAGVSALIAFPALLVRIYSGWGLNGLPPW 227
            +G  G  GG+   +L+ +     +    A    +       AL++ +++          
Sbjct: 147 YTGYFGAAGGVIVLVLLTYITNDKFIVINAIKNVICGFANLVALIIFMFTS--------- 197

Query: 228 SLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
               +     + +     +   +   +   + +K + I  + + F  +  F
Sbjct: 198 ---HIYWLQAIPLAIGMFIGGYIGPAILRRVPEKPVRIFIASLAFIQAGYF 245


>gi|3643608|gb|AAC42255.1| hypothetical protein [Arabidopsis thaliana]
 gi|20197510|gb|AAM15102.1| hypothetical protein [Arabidopsis thaliana]
          Length = 902

 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 8/127 (6%)

Query: 15  SKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTS 74
             +  V  + +      ++G + GL G+GGG +M P     F  +G+       V+  T+
Sbjct: 180 DSNFTVGQLVMYCTFGIIAGIVGGLLGLGGGFIMGP----LFLELGVPP----QVSSATA 231

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
              +  +S MS +E+       +      + V  I   V   ++  +  +    +  IF 
Sbjct: 232 TFAMTFSSSMSVVEYYLLKRFPVPYALYLVGVATIAAWVGQHVVRRLIAAIGRASLIIFI 291

Query: 135 LLMGILM 141
           L   I +
Sbjct: 292 LASMIFI 298


>gi|291613499|ref|YP_003523656.1| hypothetical protein Slit_1031 [Sideroxydans lithotrophicus ES-1]
 gi|291583611|gb|ADE11269.1| protein of unknown function DUF81 [Sideroxydans lithotrophicus
           ES-1]
          Length = 260

 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 84/250 (33%), Gaps = 38/250 (15%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L   F   GI  +     A+GT L   + T  +    H R+GT++ K++      
Sbjct: 26  LMTPLLVLFF---GISPTT----AVGTDLLYASLTKALGGWVHGRNGTVDWKVVGLLSLG 78

Query: 107 LPITTVVTSLMISHV--DKSFLNKAF-AIFCLLMGILMLKRDRLYCERKFPDN------- 156
                ++T +++ ++  D   L      +  + + +           RK           
Sbjct: 79  SLPAALITIVLLKYLALDAKTLKGLVTGVLSVALVLTATALLLKERIRKLAQREDGTVYE 138

Query: 157 -------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY--GASIYKATATSAGVSALIA 207
                        G + G L     +G G+   + +LF     S  +   T    +  + 
Sbjct: 139 LHHRHLTGATVATGFIVGALVTISSIGAGVLGTVALLFLYPRMSASRVVGTDIAHAVPLT 198

Query: 208 FPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGF 267
             A +  +            +LG V+   +  +L  S+    + + LS  + +K L    
Sbjct: 199 AVAGIGHV------------ALGTVDFVLLGSLLLGSLPGIYIGSHLSAKVPEKILRPVL 246

Query: 268 SMIMFTTSFV 277
           + ++      
Sbjct: 247 ASMLLLIGTR 256



 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 45/117 (38%), Gaps = 6/117 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +   F+ G L  +  +G G++    L   +  M           +GT +    P + ++ 
Sbjct: 149 VATGFIVGALVTISSIGAGVLGTVALLFLYPRMSASRV------VGTDIAHAVPLTAVAG 202

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           + H   GT++  +L   +        + S + + V +  L    A   LL+G  ++ 
Sbjct: 203 IGHVALGTVDFVLLGSLLLGSLPGIYIGSHLSAKVPEKILRPVLASMLLLIGTRLVL 259


>gi|224436976|ref|ZP_03657957.1| hypothetical protein HcinC1_03340 [Helicobacter cinaedi CCUG 18818]
 gi|313143449|ref|ZP_07805642.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313128480|gb|EFR46097.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 260

 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 82/203 (40%), Gaps = 15/203 (7%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             +++   +SG  +G FG+GGG+++VPVL            + M  A+G S+  +  +S 
Sbjct: 8   WFLVILGVVSGAAAGFFGIGGGVIIVPVLLLC--------GVDMESAIGISIMQMIFSSS 59

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +  M +  H  ++++          +    + ++++ +    L  AF +  L+     + 
Sbjct: 60  VGSMINIYHKKLDVRDGVFVGLGGLMGAAFSGVIVASLSSFTLLLAFLLLSLVSFYKYVF 119

Query: 144 RDRLYCERKFP------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKAT 196
             +       P         V  + G+VTG  + +LGVGGG+    ++ +Y G +  K  
Sbjct: 120 DVKTNANPTPPITDSVRQKAVMILAGLVTGIFAVSLGVGGGLILAPILAYYLGFNSKKVV 179

Query: 197 ATSAGVSALIAFPALLVRIYSGW 219
             S       +    +     G 
Sbjct: 180 PISLFFIIFASISGSISLGSHGL 202


>gi|183597290|ref|ZP_02958783.1| hypothetical protein PROSTU_00537 [Providencia stuartii ATCC 25827]
 gi|188023307|gb|EDU61347.1| hypothetical protein PROSTU_00537 [Providencia stuartii ATCC 25827]
          Length = 250

 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 53/155 (34%), Gaps = 14/155 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +       +  + G+ G G  L+  PVL+    L  I             L +I  T+
Sbjct: 10  MAICFFTLLCAYLVFGMAGFGSALIATPVLAMYLPLNMIVPI----------LALIDLTA 59

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            +  +        + + +K  I ++ + +++ + ++       L     IF +   + + 
Sbjct: 60  ALINLVKDGKNA-DYQEIKWIIPLMVVGSLIGAAILLKTRPDILILLLGIFVIFYVMNVF 118

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
              +           +   + ++ G  S   G GG
Sbjct: 119 FSKKGQSHF---SKILVVPFSLIGGIFSALFGSGG 150


>gi|58336676|ref|YP_193261.1| integral membrane protein [Lactobacillus acidophilus NCFM]
 gi|227903236|ref|ZP_04021041.1| integral membrane protein [Lactobacillus acidophilus ATCC 4796]
 gi|58253993|gb|AAV42230.1| putative integral membrane protein [Lactobacillus acidophilus NCFM]
 gi|227869041|gb|EEJ76462.1| integral membrane protein [Lactobacillus acidophilus ATCC 4796]
          Length = 252

 Score = 37.7 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 86/261 (32%), Gaps = 26/261 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  +++     G LS +  +   L   PVL       GI        A  T+   +  TS
Sbjct: 6   IIFLLIGGVAGGLLSSVASM-ASLASYPVLLAV----GIPPVY----ANVTNDAALIWTS 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S +   +    + K    +     I +V+  +++     S   KA   F    GI+++
Sbjct: 57  IGSTISSTKELKGHWKETWFYTIFTVIGSVMGCVLLLSFPSSVFEKAVPFFIAFSGIMII 116

Query: 143 KRDRLYCERKFPDNYVK----YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT-A 197
              +                  +  ++ G  +G  G  GG+   +L+ +     +    A
Sbjct: 117 ISGKHNALNTAKQPMWLKIVYLVALLIMGVYTGYFGAAGGVIVLVLLTYITNEKFIVINA 176

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
               V       AL++ +++              +     + +     +   +   +   
Sbjct: 177 IKNVVCGFANLVALIIFMFTSR------------IYWLQAIPLAIGMFIGGYIGPAILRR 224

Query: 258 IGKKYLTIGFSMIMFTTSFVF 278
           + +K + I  + + FT +  F
Sbjct: 225 VPEKPVRIFIAALAFTQAGYF 245


>gi|299136342|ref|ZP_07029526.1| protein of unknown function DUF81 [Acidobacterium sp. MP5ACTX8]
 gi|298602466|gb|EFI58620.1| protein of unknown function DUF81 [Acidobacterium sp. MP5ACTX8]
          Length = 259

 Score = 37.7 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 81/268 (30%), Gaps = 34/268 (12%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +   ++VAS ++G ++ + G GG  V  P +            +    A  T+   + P 
Sbjct: 10  HYIWLVVASTIAGVMNAMAG-GGSFVSFPAMLGV--------GVAPVQANATNTVALWPG 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            + S         +   +L        I  V  + ++ +  +S   +      L   +L 
Sbjct: 61  QLTSVAA--LRDDVRRDLLPTVALTCLIGGVAGAEVLLNTPQSTFFRLVPWLLLGGTVLF 118

Query: 142 ---------LKRDRLYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA- 190
                    L+    +   + P              F  G  G GGG     ++  +G  
Sbjct: 119 GISGPISRRLRSRAAHPHEQRPIPKLGLAAALFPVCFYIGYFGAGGGFLAMTVLALFGVE 178

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           ++++  A     + L    A++  I              G V     +I +  +     +
Sbjct: 179 NMHELNAMKVVAALLSNLVAIVTFILK------------GAVVWHYCVISMVFAAAGGYV 226

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
             + +       L     +   T +  F
Sbjct: 227 GARWAKRTNPNVLRAVIVVTGCTIAAYF 254


>gi|50086487|ref|YP_047997.1| thiol:disulfide interchange protein precursor [Acinetobacter sp.
           ADP1]
 gi|49532463|emb|CAG70175.1| thiol:disulfide interchange protein precursor [Acinetobacter sp.
           ADP1]
          Length = 606

 Score = 37.7 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 65/219 (29%), Gaps = 53/219 (24%)

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD---KSFLN-----KAF 130
             TS++   EHR        +   ++  +     V  L+ S      + +L        F
Sbjct: 230 ILTSLI-VREHRGLKA--WAVALTFVVSMATVYAVLGLIASSAGLNFQRWLQQPATLIGF 286

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYI----WGMVTGFLSGALGVGGGIFTNLLML 186
           ++  ++  + +     L   +K  +   +       G + G  +  +GV   +     M 
Sbjct: 287 SLLFIVFALNLFGLFELKLPQKLINQLDQIQSVQQGGTLIG--AAVMGVISALLVGPCMT 344

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGL--NGLPPWSLGFVNIGAVLIILPIS 244
                                    L+ I          L  + LGF        +    
Sbjct: 345 A-------------------PLAGTLLFIAQTQDQWRGALLLFCLGF-------GMGIPL 378

Query: 245 ILITPLATKLSYMIGKK-----YLTIGFSMIMFTTSFVF 278
           ++ T L TK+   + K       + + F+ IM   +  F
Sbjct: 379 LIATFLGTKI---LPKAGQWMHQIKVIFAFIMLALAIYF 414


>gi|254473092|ref|ZP_05086490.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
 gi|211957813|gb|EEA93015.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
          Length = 254

 Score = 37.7 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 66/208 (31%), Gaps = 12/208 (5%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A    L ++    V+    +RR  T +  +LK  I    +   +     ++  ++ +   
Sbjct: 49  AAAILLPLLVAMDVVGLYAYRR--TYDTTVLKLTIPAGILGVAIGWATAAYFSEAIIRLL 106

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
                L   +     D+   E   P       WG + GF S  +   GG    +  L   
Sbjct: 107 IGGIALAFVMKYWIGDKAEKEAPKPSKAKGIFWGTIAGFTS-FVSHAGGPPFQIYALPLK 165

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
                   T+    A+I    L+     G              N+    ++LP++ +   
Sbjct: 166 LPTILFAGTAVIFFAVINAIKLIPYTMLGEFDAT---------NLTVSAVLLPLAPISMY 216

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L  K++ +I  +         +F  +  
Sbjct: 217 LGVKIAKVISPQLFYKITYFGVFIVALK 244


>gi|152982815|ref|YP_001353577.1| hypothetical protein mma_1887 [Janthinobacterium sp. Marseille]
 gi|151282892|gb|ABR91302.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 241

 Score = 37.7 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 71/200 (35%), Gaps = 17/200 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +     +++   L+G +SG+ G G  ++++PVL   F            +A+   +    
Sbjct: 1   MSSYIFVLMVGLLAGAISGVIGTGSSIMLLPVLVYTFG----PKQAVPIMAVAAVMA--- 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             ++   M   +   ++ +    +         + +  +  +    +     IF +L   
Sbjct: 54  --NLSRVMAWWKL--VDWRAFAAYSITGVPAAAIGARTLLALPSHLIEICLGIFFIL--- 106

Query: 140 LMLKRDRLYCERKFPDNYVKY-IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
            M+   R    R +     +  I G + GFL+G + +  G  +      YG       +T
Sbjct: 107 -MIPARRWLVARNYTIKLWQLSIIGALIGFLTGLV-LSTGPLSVPAFTAYGLVKGAFLST 164

Query: 199 SAGVSALIAFPALLVRIYSG 218
            A  S ++    ++     G
Sbjct: 165 EAASSLMLYVTKVITFREFG 184


>gi|301122685|ref|XP_002909069.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099831|gb|EEY57883.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 470

 Score = 37.7 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 25/57 (43%)

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYS 217
           +     G ++G  GVGGGI T  LM+  G     A+AT+A +    +  A       
Sbjct: 338 LACAGAGLIAGLFGVGGGIVTGPLMIEMGIVPEVASATTALMVLYSSAAATAKFAVF 394



 Score = 36.6 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 12/94 (12%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +A   +G ++GLFGVGGG+V  P++        I+  I   VA  T+  ++  +S  +  
Sbjct: 338 LACAGAGLIAGLFGVGGGIVTGPLM--------IEMGIVPEVASATTALMVLYSSAAATA 389

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHV 121
           +              W  +L     V + +   +
Sbjct: 390 KFAVFNMTAWD----WALLLSAVAFVVTAVSQVI 419


>gi|258507539|ref|YP_003170290.1| integral membrane protein [Lactobacillus rhamnosus GG]
 gi|257147466|emb|CAR86439.1| Conserved integral membrane protein [Lactobacillus rhamnosus GG]
 gi|259648890|dbj|BAI41052.1| putative transporter protein [Lactobacillus rhamnosus GG]
          Length = 250

 Score = 37.7 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 61/172 (35%), Gaps = 12/172 (6%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ I  ++  S L+G L+G+ G+   L + PVL            +    A  T+   + 
Sbjct: 3   IETILFLLGMSLLAGILNGIVGM-AALTLYPVLLSV--------GVAPITANATNTIGLL 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            +   +    R     +         +  I  V  +L++ H   +   +       L G+
Sbjct: 54  FSGSSAVAASRHELKGHWHQALVITLLNTIGGVFGALILIHSSNAGFKRVVPFIIFLAGV 113

Query: 140 LMLKRDRLYCERKFPDNYVKY---IWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           L+L   +          ++++   +  M+ G   G  G G G+    ++   
Sbjct: 114 LILMPPKPASSNSSTRQHLRWFGYVLVMLVGIYVGYFGAGAGLLMVAVLSRL 165



 Score = 35.8 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
               V   L G   G FG G GL+MV VLS+  +      +   ++A   SL     TS+
Sbjct: 134 WFGYVLVMLVGIYVGYFGAGAGLLMVAVLSRLVEGPYATYNAMRNLA---SLVNNLVTSI 190

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M          I   +L      L     +  +++  +    +  A  IF L + + +  
Sbjct: 191 MFIFS----MPIAWGVLIPVCIGLFAGGFLGPVIVRLIPSRIIKTAVGIFALGLAVFLFY 246

Query: 144 R 144
           +
Sbjct: 247 Q 247


>gi|118469136|ref|YP_888036.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
 gi|118170423|gb|ABK71319.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
          Length = 260

 Score = 37.7 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 87/267 (32%), Gaps = 36/267 (13%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD-SICMHVAMGTSLGVI 78
           V ++ LI +A   +G ++ + G G  L+  P L      +G    +  M  A+G     +
Sbjct: 3   VTHMILIALAGVGAGAINAVVGSGT-LITFPTLV----ALGYPPVTSTMSNAVG-----L 52

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
               V     +RR      K L+  I    I  ++ + ++ H+ +        I  +L  
Sbjct: 53  VAGGVSGTWGYRRELRGQWKRLRWQIPASLIGAIIGAWLLLHLPEKVFVTVVPILLILAL 112

Query: 139 ILMLKRDRLY-------------CERKFPDNYVKYIWGM-VTGFLSGALGVGGGIFTNLL 184
           +L+L   R+               +       V  + G    G   G      GI    +
Sbjct: 113 VLVLVGPRIQAWARKRAEASGNGADHVSTRRMVAVVLGTWAVGIYGGYFTAAQGILLVAV 172

Query: 185 M-LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
           M      SI +  A    +S L+   A L      +            ++  A  +I   
Sbjct: 173 MGALLPESIQRMNAAKNLLSLLVNIVAALAYTLVAFDR----------ISWEAAGLIAVG 222

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMI 270
           S+L   L +     +    L     ++
Sbjct: 223 SLLGGFLGSHFGRRLSPNALRAVIIIV 249


>gi|222480205|ref|YP_002566442.1| protein of unknown function DUF81 [Halorubrum lacusprofundi ATCC
           49239]
 gi|222453107|gb|ACM57372.1| protein of unknown function DUF81 [Halorubrum lacusprofundi ATCC
           49239]
          Length = 348

 Score = 37.7 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 32/76 (42%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
              +  A+GTSL     +  +    + R G I++ I+   +    +   + S   ++V++
Sbjct: 220 GTSLAAAVGTSLFTGLLSGGVGAFTYGRAGVIDLGIVTALLLGSALGARIGSGATAYVNE 279

Query: 124 SFLNKAFAIFCLLMGI 139
             +   F I  L+  I
Sbjct: 280 DDVTIYFGIMLLIASI 295


>gi|242278185|ref|YP_002990314.1| hypothetical protein Desal_0709 [Desulfovibrio salexigens DSM 2638]
 gi|242121079|gb|ACS78775.1| protein of unknown function DUF81 [Desulfovibrio salexigens DSM
           2638]
          Length = 240

 Score = 37.7 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 61/191 (31%), Gaps = 13/191 (6%)

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
           M HR   +++   +   I      +++ ++M+  ++  ++               L    
Sbjct: 57  MTHRLRKSLDRAKILPLILGSIPGSILGTMMLKEINGDYIRVFLGFLIAGFAAYSLLART 116

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
                    N   Y+ G +TG ++ A+  GG   + +     G       AT   +    
Sbjct: 117 PKFNI---SNKWGYLSGFLTGSIAAAVSAGG-PPSIIYASIQGWKKDTVKATLVSLFLFS 172

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
              A +  + SG            F+    VL  +      T +  KLS  +  ++ +  
Sbjct: 173 GILAAVGHLISGLTT---------FLAFKLVLASVLPIFAGTYIGNKLSNRLSDEFYSRI 223

Query: 267 FSMIMFTTSFV 277
              ++     +
Sbjct: 224 VMTLLVIMGLM 234


>gi|307294648|ref|ZP_07574490.1| protein of unknown function DUF81 [Sphingobium chlorophenolicum
           L-1]
 gi|306879122|gb|EFN10340.1| protein of unknown function DUF81 [Sphingobium chlorophenolicum
           L-1]
          Length = 263

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 49/119 (41%), Gaps = 5/119 (4%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++A  L G +  L  VG G +   +L   + L      + M   + T +    P ++
Sbjct: 149 ALTVLAGALLGAMVTLTSVGAGAIGATLLLALYPLR-----MRMQRLVATDIVHAVPLTL 203

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           ++ + H   G +N  +L + +       V+ SL+ +      L    A   +++G  ++
Sbjct: 204 VAGLGHLWIGNVNPMLLVNLLAGSLPGIVIGSLLATRTSDRVLQPLLAAVLVVVGWRLI 262



 Score = 35.8 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 90/277 (32%), Gaps = 42/277 (15%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  +A    G + G+ GVGGG +M P+L   F        +    A+GT L   + T  
Sbjct: 3   WLHAIAGLFVGLMVGMTGVGGGSLMAPILILLF-------GVAPTTAVGTDLWFASITKA 55

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI---------SHVDKSFLNKAFAIFC 134
           +    H   G  +       +  L I ++  SL++           +    +  A  +  
Sbjct: 56  VGGAVHHHQGGTDGGPDYQVVKRLMIGSIPASLIMLAILSQMHLGQIKTGVVTGALGVVL 115

Query: 135 LLMGILMLKRDRLYCERKFPD-----------NYVKYIWGMVTGFLSGALGVGGGIFTNL 183
           +      L R R +                    +  + G + G +     VG G     
Sbjct: 116 IGTAAATLLRGRFHAWALARRVGTADNFTRWQPALTVLAGALLGAMVTLTSVGAGAIGAT 175

Query: 184 LML---FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
           L+L        + +  AT    +  +   A L  ++            +G VN   ++ +
Sbjct: 176 LLLALYPLRMRMQRLVATDIVHAVPLTLVAGLGHLW------------IGNVNPMLLVNL 223

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
           L  S+    + + L+     + L    + ++    + 
Sbjct: 224 LAGSLPGIVIGSLLATRTSDRVLQPLLAAVLVVVGWR 260


>gi|320353473|ref|YP_004194812.1| hypothetical protein Despr_1358 [Desulfobulbus propionicus DSM
           2032]
 gi|320121975|gb|ADW17521.1| protein of unknown function DUF81 [Desulfobulbus propionicus DSM
           2032]
          Length = 304

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/119 (10%), Positives = 36/119 (30%), Gaps = 9/119 (7%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + +F+    + + G+ G  +++P             S        T+             
Sbjct: 17  LVAFVISFFTSMGGISGAFLLLPFQLSVLGYTHPSVS-------STNQLYNIVAIPSGVY 69

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSL--MISHVDKSFLNKAFAIFCLLMGILMLKR 144
            + + G +   +    +       ++ ++  +    D        A+  L + + M+K 
Sbjct: 70  RYCKEGRMVWPLAWAVVIGTLPGVLIGAVVRVTGLRDPRHFKLFAAVVILYIALKMIKD 128


>gi|300858342|ref|YP_003783325.1| hypothetical protein cpfrc_00924 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685796|gb|ADK28718.1| putative membrane protein [Corynebacterium pseudotuberculosis
           FRC41]
 gi|302206060|gb|ADL10402.1| Predicted permease [Corynebacterium pseudotuberculosis C231]
 gi|308276296|gb|ADO26195.1| Putative membrane protein [Corynebacterium pseudotuberculosis I19]
          Length = 247

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 57/175 (32%), Gaps = 10/175 (5%)

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
              ++ +       V+ +  +  + +I+ V  + L        LL+  L +    +    
Sbjct: 62  RKNVDWQKFFLIAPVVVLGAIPGAWLITVVSGATLQVVVGS--LLLSALAIVTFGVQRIP 119

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
                    I G++ GF++   G+ G   T    +   + +  A AT   +  +    +L
Sbjct: 120 HAQGKIPAVITGVIAGFMNTLAGIAGPAITVYAQVSRWSQVPFA-ATLQPIFIVSGLVSL 178

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
            V+I SG G            +      I  + I    +  + S  I +      
Sbjct: 179 TVKIVSGAGTVASVS------SWVWFFGIFGM-ITGISIGARASQKIPRPTARKI 226


>gi|240124125|ref|ZP_04737081.1| hypothetical protein NgonP_09340 [Neisseria gonorrhoeae PID332]
          Length = 176

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 59/171 (34%), Gaps = 17/171 (9%)

Query: 112 VVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM----VTG 167
           +V +L +S V K  L     +  + + +  +   +L   ++       +++G+    + G
Sbjct: 1   MVGALSVSLVSKDILLAVVPVLLIFIALYFVFSPKLDGSKEGKARMSFFLFGLTVAPLLG 60

Query: 168 FLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
           F  G  G G G  F    ++  G  +  A + +   +      +L V +  G        
Sbjct: 61  FYDGVFGPGVGSFFLIAFIVLLGCKLLNAMSYTKLANVACNLGSLSVFLLHGS------- 113

Query: 227 WSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
                +    V  +   + +   L  + +   G K +     +I  + +  
Sbjct: 114 -----IIFPIVATMAVGAFVGANLGARFAVRFGSKLIKPLLIVISISMAVK 159


>gi|28379190|ref|NP_786082.1| transport protein [Lactobacillus plantarum WCFS1]
 gi|254557322|ref|YP_003063739.1| transport protein [Lactobacillus plantarum JDM1]
 gi|308181390|ref|YP_003925518.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|28272028|emb|CAD64933.1| transport protein [Lactobacillus plantarum WCFS1]
 gi|254046249|gb|ACT63042.1| transport protein [Lactobacillus plantarum JDM1]
 gi|308046881|gb|ADN99424.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 257

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 46/117 (39%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +  FL G  +G FG  GG++M+ +LS       +  +   ++A+G +       +++S +
Sbjct: 144 LGIFLVGAYTGYFGAAGGVLMLSILSFTSAAPFVVYNAQKNLALGLA-------NIVSAV 196

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +     I  + +        I   +   ++ H+    L     I  L +   + K 
Sbjct: 197 VYGLQTPIQWRYVLPLGIGFLIGGSLGPRIVRHLPARLLKIVIGIGALGLAASLFKS 253



 Score = 36.6 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 76/204 (37%), Gaps = 18/204 (8%)

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           T+   +  TS  +    RR    + + LK  I +  + ++V ++++  +  +   K    
Sbjct: 49  TNTVGLVFTSFGAVPASRRELRGHGQELKTLIPLTLVGSIVGAILLFIIPAATFAKVVPF 108

Query: 133 FCLLMGILMLKRDRLYCERKFPD-------NYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
           F L+ GIL+L    ++ ++             + ++   + G  +G  G  GG+    ++
Sbjct: 109 FILIAGILVLIPRHIHIKQPGEIVVTPKWMTALAWLGIFLVGAYTGYFGAAGGVLMLSIL 168

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
            F  A+ +     +A  +  +    ++  +  G             +    VL +    +
Sbjct: 169 SFTSAAPF--VVYNAQKNLALGLANIVSAVVYGLQTP---------IQWRYVLPLGIGFL 217

Query: 246 LITPLATKLSYMIGKKYLTIGFSM 269
           +   L  ++   +  + L I   +
Sbjct: 218 IGGSLGPRIVRHLPARLLKIVIGI 241


>gi|300768587|ref|ZP_07078486.1| permease [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|300493894|gb|EFK29063.1| permease [Lactobacillus plantarum subsp. plantarum ATCC 14917]
          Length = 275

 Score = 37.4 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 46/117 (39%), Gaps = 7/117 (5%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +  FL G  +G FG  GG++M+ +LS       +  +   ++A+G +       +++S +
Sbjct: 162 LGIFLVGAYTGYFGAAGGVLMLSILSFTSAAPFVVYNAQKNLALGLA-------NIVSAV 214

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +     I  + +        I   +   ++ H+    L     I  L +   + K 
Sbjct: 215 VYGLQTPIQWRYVLPLGIGFLIGGSLGPRIVRHLPARLLKIVIGIGALGLAASLFKS 271



 Score = 36.6 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 76/204 (37%), Gaps = 18/204 (8%)

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           T+   +  TS  +    RR    + + LK  I +  + ++V ++++  +  +   K    
Sbjct: 67  TNTVGLVFTSFGAVPASRRELRGHGQELKTLIPLTLVGSIVGAILLFIIPAATFAKVVPF 126

Query: 133 FCLLMGILMLKRDRLYCERKFPD-------NYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
           F L+ GIL+L    ++ ++             + ++   + G  +G  G  GG+    ++
Sbjct: 127 FILIAGILVLIPRHIHIKQPGEIVVTPKWMTALAWLGIFLVGAYTGYFGAAGGVLMLSIL 186

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
            F  A+ +     +A  +  +    ++  +  G             +    VL +    +
Sbjct: 187 SFTSAAPF--VVYNAQKNLALGLANIVSAVVYGLQTP---------IQWRYVLPLGIGFL 235

Query: 246 LITPLATKLSYMIGKKYLTIGFSM 269
           +   L  ++   +  + L I   +
Sbjct: 236 IGGSLGPRIVRHLPARLLKIVIGI 259


>gi|311739843|ref|ZP_07713677.1| Brp/Blh family beta-carotene 15,15'-monooxygenase [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311304916|gb|EFQ80985.1| Brp/Blh family beta-carotene 15,15'-monooxygenase [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 245

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 69/195 (35%), Gaps = 21/195 (10%)

Query: 25  LIIVASFLSGTLS-GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           + I    L+GT++ G  G G G +  P+++     +     + + +             +
Sbjct: 13  IFIGVLILAGTITQGTIGFGLGTIATPIIALIRPELVPTLILLLALC------------I 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S+   R +   + +++          ++V +  I+ +    L+       LL   L   
Sbjct: 61  SSYTLARTYRETSWRVVGISSLARIPGSLVGAWAIASLSPDGLSIFIGCAVLLAMTLSSL 120

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             R       P      I G+ +G L  +  +GG     + ++       +   T AG  
Sbjct: 121 GWRPR-----PTTANTLIAGVASGILGTSTSIGG---PPMALIMKRFDPNRTRGTLAGTF 172

Query: 204 ALIAFPALLVRIYSG 218
            L    +L++  ++G
Sbjct: 173 VLGTLISLIILTFNG 187


>gi|328542508|ref|YP_004302617.1| hypothetical protein SL003B_0888 [polymorphum gilvum SL003B-26A1]
 gi|326412254|gb|ADZ69317.1| Hypothetical transmembrane protein [Polymorphum gilvum SL003B-26A1]
          Length = 254

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 12/197 (6%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +    I A  L+G   G FG   G++ VP+++     +          A G  L ++   
Sbjct: 9   FYAAAIPAVILAGLSKGGFGGSIGMLAVPLMALVIPPLQ---------AAGIMLPILLVM 59

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
             +    +   GT + + L   +        +     + V+ + +     +  LL     
Sbjct: 60  DAVGLFAY--RGTFDRRTLLILLPAGVAGVGIGWATAAWVEDAHVRLIVGVIALLFVADY 117

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L       E +        +WG V GF S  +   GG    L ++    +      T+  
Sbjct: 118 LLGGARSREPRPQRTGPGLLWGSVAGFTS-FVSHTGGPPFQLYVVPLRLAPAVFAGTAVI 176

Query: 202 VSALIAFPALLVRIYSG 218
             ++I    L+   Y G
Sbjct: 177 FFSVINAIKLVPYFYLG 193


>gi|307109812|gb|EFN58049.1| hypothetical protein CHLNCDRAFT_50737 [Chlorella variabilis]
          Length = 752

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 42/122 (34%), Gaps = 15/122 (12%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +V + L   LS   GVGGG V VP+ S          SI +  A   S  VI   ++ S 
Sbjct: 332 LVLAPLVSALSNAAGVGGGAVFVPLFSVLL-------SISIKAATALSQAVITGGAIGSV 384

Query: 87  -----MEH-RRHGT--INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                 +H  R G   I+  +    +  L +      L+   +    +        +   
Sbjct: 385 AFSLTRQHPLRPGAPLIDFSLALTLLPPLLLGVATGVLLNLALPAWLVTILLIPLLITFA 444

Query: 139 IL 140
           I 
Sbjct: 445 IR 446


>gi|282891274|ref|ZP_06299776.1| hypothetical protein pah_c050o043 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498771|gb|EFB41088.1| hypothetical protein pah_c050o043 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 279

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 61/203 (30%), Gaps = 18/203 (8%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
             ++I+ SF    +    G+G G +    L+    LMG      +     T L     T 
Sbjct: 33  FVVLILVSFFCEFVDSGLGMGYGTI----LTSTLLLMGYHPLDIVP----TILLSELFTG 84

Query: 83  VMSFMEHRRHGTINMKI-------LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
             S   H +   +++K                 +   +    +  + ++ +         
Sbjct: 85  FASAYFHDQIENVDLKFNGVHFNRAVLLAATSMVGLSLGVYTVQILPENLIIMLIGCIVF 144

Query: 136 LMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
           + G+ ++       E     N+   +  +V  F     G G G       +  G     A
Sbjct: 145 ISGLFVVVFANQVLEY---RNWKMALLAIVAAFNKAISGGGYGPLVTSGQILSGVQGKSA 201

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
              ++   A     ++++    G
Sbjct: 202 VGITSFAEAFTCLLSVILFRTQG 224


>gi|255323843|ref|ZP_05364969.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
           SK141]
 gi|255299023|gb|EET78314.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
           SK141]
          Length = 245

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 69/195 (35%), Gaps = 21/195 (10%)

Query: 25  LIIVASFLSGTLS-GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
           + I    L+GT++ G  G G G +  P+++     +     + + +             +
Sbjct: 13  IFIGVLILAGTITQGTIGFGLGTIATPIIALIRPELVPTLILLLALC------------I 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            S+   R +   + +++          ++V +  I+ +    L+       LL   L   
Sbjct: 61  SSYTLARTYRETSWRVVGISSLARIPGSLVGAWAIASLSPDGLSIFIGCAVLLAMTLSSL 120

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
             R       P      I G+ +G L  +  +GG     + ++       +   T AG  
Sbjct: 121 GWRPR-----PTTANTLIAGVASGILGTSTSIGG---PPMALIMKRFDPNRTRGTLAGTF 172

Query: 204 ALIAFPALLVRIYSG 218
            L    +L++  ++G
Sbjct: 173 VLGTLISLIILTFNG 187


>gi|319898456|ref|YP_004158549.1| membrane protein [Bartonella clarridgeiae 73]
 gi|319402420|emb|CBI75961.1| putative membrane protein [Bartonella clarridgeiae 73]
          Length = 306

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 49/308 (15%), Positives = 102/308 (33%), Gaps = 58/308 (18%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           + ++L    +   + ++I    + G  SGLFG+GGG ++ P+L           +I   +
Sbjct: 1   MSIYLPIAELSLSMLILIGMGAVVGFFSGLFGIGGGFLITPLLIFY--------NIPPTI 52

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+GT    +  +SV   + H +  T+++K+    +    I +++   + S +        
Sbjct: 53  AVGTGANQVIASSVTGAITHFKRRTLDIKLGILLVIGGGIGSLIGIQIFSLLR-KLGQLD 111

Query: 130 FAIFCLLMGI---------------LMLKRDRLYCERKFPDNY----------------- 157
           F I  L + +               +M +R         P  Y                 
Sbjct: 112 FIISLLYVFLLGSIGSLMMVESLCAMMRQRKEKKITTHSPSYYNWIDRLPFKIHFQASMI 171

Query: 158 -----VKYIWGMVTGFLSGALGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPAL 211
                     G V G LS  +GVGGG  T   +++           TS      ++    
Sbjct: 172 CVSIIPVLGIGFVVGLLSSIMGVGGGFITVPALIYLLRVPTGVVVGTSLFQMTFVSAFTT 231

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           +++  S              V+I    ++     +      +    +  + L +  + ++
Sbjct: 232 VLQSVSNQS-----------VDIVLAFLLTIGGGIGAQYGVRAGQKLKAEQLRMALAFLV 280

Query: 272 FTTSFVFA 279
                  A
Sbjct: 281 IIVCMRLA 288


>gi|303325937|ref|ZP_07356380.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
 gi|302863853|gb|EFL86784.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
          Length = 252

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 86/259 (33%), Gaps = 26/259 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++V++  +  L    G+G GL ++P LS  F       +            ++    
Sbjct: 6   LTILLVSTAFAAFLKSGAGIGTGLFLLPALSLIFDPFKALAATA---------PLLLIMD 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI--L 140
           +M+   H +   I   +L        I  +  SL + H+  + L     I  ++  +  L
Sbjct: 57  IMAVGCHWKR-WIGPPVLTAMTRFSVIGVLCGSLAVPHLPANILKILIGIIGVIYALSNL 115

Query: 141 MLKRDRLYCERKFPDNYVKYIW-GMVTGFLSGALGV--GGGIFTNLLMLFYGASIYKATA 197
           +  R   Y   + P ++        +  FL G   V   G +F    M+          A
Sbjct: 116 LPFRGPRYLTSRLPASFAATAMPAYLASFLGGLFNVVNAGSVFYAFSMVHLKLESRVFVA 175

Query: 198 TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYM 257
           T   +  +  F   +    +G     L         I   L ++P+  + + + +++   
Sbjct: 176 TCCALILISNFVRAVGFSLNGMLPPDL---------IIIALKLIPVIAVFSWMGSRIVAR 226

Query: 258 IGKKYLTIGFSMIMFTTSF 276
                      + +   + 
Sbjct: 227 CPPALFRNL--VFLLILAM 243


>gi|326331596|ref|ZP_08197886.1| putative integral membrane protein [Nocardioidaceae bacterium
           Broad-1]
 gi|325950852|gb|EGD42902.1| putative integral membrane protein [Nocardioidaceae bacterium
           Broad-1]
          Length = 253

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 48/140 (34%), Gaps = 7/140 (5%)

Query: 5   LYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDS 64
           L  F        +  V    L  V + L+G   G FG G G++M+ VL       G+   
Sbjct: 121 LSRFLRQHATDDEPRVRISGLTTVFATLTGVYGGYFGAGSGVMMMAVL-------GLGTD 173

Query: 65  ICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
           +            +  ++V++ +       ++ + +        +   V + +   +  +
Sbjct: 174 LEFRTVNALKTFAVMASNVVATVIFLAIADLDWRAVGLLAAGSVVGGYVGAHIGRRLPAT 233

Query: 125 FLNKAFAIFCLLMGILMLKR 144
            L     +  +    LML R
Sbjct: 234 VLRSLIVVVGIGAATLMLVR 253



 Score = 35.4 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 79/250 (31%), Gaps = 29/250 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++ A   +G L+   GV   L+  PVL            +   VA  ++   + P  +
Sbjct: 7   LAVLAAGLGAGILTSTVGV-ASLLSFPVLVAV--------GLPPVVANTSNTVGMTPAGL 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL----LMGI 139
                +RR    +  +    +       V  SL++  +  S          L    L+GI
Sbjct: 58  SGSFGYRRELAEHPGVTAAVLMTAAGGGVAGSLLLLWLPGSVFEAVVPWLILGTCVLVGI 117

Query: 140 L-----MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
                  L++     E +   + +  ++  +TG   G  G G G+    +M   G     
Sbjct: 118 QPRLSRFLRQHATDDEPRVRISGLTTVFATLTGVYGGYFGAGSGVM---MMAVLGLGTDL 174

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
              T   +       + +V       +  L        +  AV ++   S++   +   +
Sbjct: 175 EFRTVNALKTFAVMASNVVATVIFLAIADL--------DWRAVGLLAAGSVVGGYVGAHI 226

Query: 255 SYMIGKKYLT 264
              +    L 
Sbjct: 227 GRRLPATVLR 236


>gi|225390397|ref|ZP_03760121.1| hypothetical protein CLOSTASPAR_04150 [Clostridium asparagiforme
           DSM 15981]
 gi|225043536|gb|EEG53782.1| hypothetical protein CLOSTASPAR_04150 [Clostridium asparagiforme
           DSM 15981]
          Length = 234

 Score = 37.4 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 35/87 (40%), Gaps = 1/87 (1%)

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
           R    +N ++      ++ + ++    ++ + D + L K F    + +G+ M    +   
Sbjct: 54  RERRRLNPRVWLPLSGMVLLGSIPGVFLLRYTDAALLKKVFGAVVVYLGLSMAMEWKSRS 113

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVG 176
                     ++  +++G + G  G+G
Sbjct: 114 GGARGGGGFGFMG-ILSGMVCGMFGIG 139


>gi|227542039|ref|ZP_03972088.1| membrane protein [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227182187|gb|EEI63159.1| membrane protein [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 246

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 67/182 (36%), Gaps = 18/182 (9%)

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL-YCERKFPDNYVKY 160
            +  +  +   + +L+ S+VDK+ +    A+  +L+G  +L +        ++P   V+ 
Sbjct: 69  RYAPLALVGAGLGALVASNVDKAIMRPIIAVALVLVGAFVLFKPSFGQSSTRYPHTTVRV 128

Query: 161 I----WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
           +      +  G   G  G G G+F  +      G    +  A +   +      AL+V  
Sbjct: 129 VAICAAVLAIGIYDGTFGPGTGVFFIMAFTSIRGGDFLENAAWAKIANTFTNLGALIVFS 188

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           + G  L GL             L +   +++   +  +L    G   L I   +++   S
Sbjct: 189 FHGEILWGLG------------LALAVANVIGAQIGARLVMAKGAGMLRILILVLVVVMS 236

Query: 276 FV 277
             
Sbjct: 237 AK 238


>gi|222149699|ref|YP_002550656.1| hypothetical protein Avi_3677 [Agrobacterium vitis S4]
 gi|221736681|gb|ACM37644.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 255

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 61/203 (30%), Gaps = 15/203 (7%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + ++   I A  L G   G  G    L+ VP+L+ A   M          A    L ++ 
Sbjct: 5   LSFLLAAIPAVVLVGLSKGGLGGAFSLLGVPILALAVPPM---------TAAAIFLPILL 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF-CLLMG 138
              +++    R HG  + +     +              + +    +         +  G
Sbjct: 56  VMDLVALHAWRHHG--DWRTFFLLLPGAIAGIAFGWATSALIPADAMRLVLGAITVVFAG 113

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSG---ALGVGGGIFTNLLMLFYGASIYKA 195
              L+R R       P    + +     G L+G    +   GG    +  L         
Sbjct: 114 RYFLRRLRGESHDARPAKPQRAVAATGWGTLAGYGSFVAHAGGPPFEIYALPLKLDPKTY 173

Query: 196 TATSAGVSALIAFPALLVRIYSG 218
           T TS    A +    ++  I  G
Sbjct: 174 TGTSVRFFACLNAIKVIPYIALG 196


>gi|73670148|ref|YP_306163.1| hypothetical protein Mbar_A2678 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397310|gb|AAZ71583.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 108

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 5/88 (5%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI-----NMKILKDWIFVLPITTVVTSLMI 118
            I + +A   SL +  PT ++  M++R+ G +     N+  +        +   + S ++
Sbjct: 11  GIDIKLAGSLSLCISLPTVLIGIMKYRQRGELKIVKNNLSFVLCMAIGSVLGAFIGSRIL 70

Query: 119 SHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             +    L     +  L+  I + K  R
Sbjct: 71  IGIGAGTLQIILGVILLISAIKIFKNKR 98


>gi|156347068|ref|XP_001621627.1| hypothetical protein NEMVEDRAFT_v1g221771 [Nematostella vectensis]
 gi|156207756|gb|EDO29527.1| predicted protein [Nematostella vectensis]
          Length = 175

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 7/88 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++  PVL+  F            VA G SL + AP++ ++   +  H  ++  +      
Sbjct: 83  VLATPVLTTVF-------GTSQVVAQGLSLALAAPSTAVTLATYAAHDHVDWLLGAPLAL 135

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIF 133
              ++      +   + +  L   FA F
Sbjct: 136 GGLLSISWGVKLAHALPERVLRGLFAGF 163


>gi|107021919|ref|YP_620246.1| hypothetical protein Bcen_0361 [Burkholderia cenocepacia AU 1054]
 gi|116688867|ref|YP_834490.1| hypothetical protein Bcen2424_0844 [Burkholderia cenocepacia
           HI2424]
 gi|105892108|gb|ABF75273.1| protein of unknown function DUF81 [Burkholderia cenocepacia AU
           1054]
 gi|116646956|gb|ABK07597.1| protein of unknown function DUF81 [Burkholderia cenocepacia HI2424]
          Length = 262

 Score = 37.4 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 77/245 (31%), Gaps = 31/245 (12%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           +M P+L   F        +    A+GT L   A T     + H   G+I+  I       
Sbjct: 31  LMTPILVLLF-------GVHPATAVGTDLLYAAATKATGTLVHGLKGSIDWHITGRLATG 83

Query: 107 LPITTVVTSL------MISHVDKSFLNKAFAIFCLLMGILMLKRD--------RLYCERK 152
                 +T        M +      +     +  LL  + ++ R                
Sbjct: 84  SVPAAALTLWWLHTHGMNTPGTARMIQLVLGVALLLTSLALIFRPQLTAFAARNPLAPSP 143

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
               +   + G V G L     VG G     ++L     +    AT+  V + IA    L
Sbjct: 144 ARTLWSTVLTGAVLGVLVSMTSVGAGAIGVTVLLLLYPLL----ATTRIVGSDIAHAVPL 199

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
                   + G+  W LG V+   +L +L  S+    + + LS    ++ L    +  + 
Sbjct: 200 TL------VAGMGHWLLGSVDWSMLLSLLLGSLPGIVIGSLLSARAPERLLRNLLASTLV 253

Query: 273 TTSFV 277
                
Sbjct: 254 AVGVR 258


>gi|260887460|ref|ZP_05898723.1| conserved hypothetical protein [Selenomonas sputigena ATCC 35185]
 gi|330840102|ref|YP_004414682.1| protein of unknown function DUF81 [Selenomonas sputigena ATCC
           35185]
 gi|260862823|gb|EEX77323.1| conserved hypothetical protein [Selenomonas sputigena ATCC 35185]
 gi|329747866|gb|AEC01223.1| protein of unknown function DUF81 [Selenomonas sputigena ATCC
           35185]
          Length = 249

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 76/254 (29%), Gaps = 31/254 (12%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A F +  L  + G G  +V  P+L         D  I + V       ++   S  + 
Sbjct: 15  LLAIFFAAFLQAITGFGLVIVAAPLLMFF-----YDPKIVVPV------MLLLACSGNTV 63

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             +      N+ ++      + +   +   +  +V    L    +    L  ++M    R
Sbjct: 64  QAYLMRKKANLPLIGHLAIGVLLGIPIGFFVFDYVSSDTLKVWISTVVFLSLLIMQISHR 123

Query: 147 LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
              E          I GM +GF S   G+ G       +++   +   A    A      
Sbjct: 124 HIPE----SRRNTIITGMCSGFSSMTTGMAG----PPFLIYLAYTKMSAETFRATCFVFF 175

Query: 207 ---AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
                 +L+  +  G  L         FV +   L           L   L+  I    L
Sbjct: 176 LCCNSTSLIGYLIGGHPLTAAVHE---FVYLLPALAAGLS------LGHALARFIPTSLL 226

Query: 264 TIGFSMIMFTTSFV 277
                 +++ T   
Sbjct: 227 RRLIFFVLYATCIY 240


>gi|326797306|ref|YP_004315126.1| hypothetical protein Marme_4090 [Marinomonas mediterranea MMB-1]
 gi|326548070|gb|ADZ93290.1| protein of unknown function DUF81 [Marinomonas mediterranea MMB-1]
          Length = 292

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 81/255 (31%), Gaps = 38/255 (14%)

Query: 42  VGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           VGGG + +P+ S A+ L   +                    + S         I+   LK
Sbjct: 50  VGGGFIFLPLFSFAYSLSAAEALKLALATQA--------FGMSSGALGWSKKVIDFHFLK 101

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-------KRDRLYCERKFP 154
                  +   + + + +      ++  F    +++ + +        K D+   +    
Sbjct: 102 LGAGAGVLGMFIGTFLFTP-PGHLIHNIFGYASIVVSLALFIEMIYIRKTDKTVFDEPNH 160

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPALLV 213
                 IW ++ G ++    +G G    L +LF    SI K+ AT   V A+ +   LL 
Sbjct: 161 SLVEFCIWALLGGLITAWTSIGIGEVVALWLLFRAKQSIVKSVATGVAVLAICSISGLLF 220

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT--------- 264
            IY G             +    ++   P  +L       L   +               
Sbjct: 221 HIYEGG------------IVWEYLIFTAPGVLLGGRAGALLGKRMAGVKKQQEPHSHNDN 268

Query: 265 IGFSMIMFTTSFVFA 279
            GF + +F    +FA
Sbjct: 269 KGFGLKLFVALVIFA 283


>gi|134094682|ref|YP_001099757.1| hypothetical protein HEAR1459 [Herminiimonas arsenicoxydans]
 gi|133738585|emb|CAL61630.1| putative permease [Herminiimonas arsenicoxydans]
          Length = 241

 Score = 37.4 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 71/202 (35%), Gaps = 17/202 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             ++    ++G +SG+ G G  ++++P+L   F            +A+   +      ++
Sbjct: 5   LFVLAVGLVAGVISGVIGTGSSIILLPILVFTFG----PKQAVPIMAVAAVMA-----NL 55

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              M   +   I+ +    +         + +  +  +  + +N    +F +L    M+ 
Sbjct: 56  ARVMAWWKL--IDWRAFAAYSITGIPAAAIGARTLLTLPVNLINSFLGLFFIL----MIP 109

Query: 144 RDRLYCERKF-PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
                  R F    +   + G V GFL+G + +  G  +      YG       AT A  
Sbjct: 110 LRHWLIARHFRLSLWHLSLAGGVIGFLTGVV-LSTGPLSVPAFTAYGLVKGAFIATEAAS 168

Query: 203 SALIAFPALLVRIYSGWGLNGL 224
           S  +    L++    G     +
Sbjct: 169 SLFLYVGKLIIFGEFGALPPDI 190


>gi|329895444|ref|ZP_08271025.1| putative permease [gamma proteobacterium IMCC3088]
 gi|328922327|gb|EGG29673.1| putative permease [gamma proteobacterium IMCC3088]
          Length = 321

 Score = 37.4 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 87/249 (34%), Gaps = 29/249 (11%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGV--IAPTSV 83
           I ++  L    +G   +GGG V  PVL   F           HV    SL V  I  TS 
Sbjct: 39  IALSMALGSYFAGSTPMGGGTVGFPVLVFGF-------DYPTHVGRDFSLAVQSIGMTS- 90

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSL-MISHVDKSFLNKAFAIFCLLMGILM- 141
            S +   R   +   +L+  I  + +   +    +   V +  +   F++     GI   
Sbjct: 91  ASLLIWCRKQALARTVLRGSIIGVTLGLPIGLFAISPWVSEFAVKALFSVLWASFGIYHL 150

Query: 142 -----LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI---FTNLLMLFYGASIY 193
                L++   +       +    +   + G L+     G GI     + L+L Y A+I 
Sbjct: 151 RYGRELRQQTGFISHHQSTDLRVGVLLGMIGGLTTVAFTGVGIDMLVYSTLILMYRANIA 210

Query: 194 KATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
            A  TS  + A  +    +++  SG    G+         I   L   P+  L  PL   
Sbjct: 211 IAIPTSVVIMAYASVYGSVLQTLSGAWSPGV---------IEQWLTAAPVVALGAPLGVL 261

Query: 254 LSYMIGKKY 262
           +   +  + 
Sbjct: 262 VVSRLAPRT 270


>gi|302534298|ref|ZP_07286640.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302443193|gb|EFL15009.1| conserved hypothetical protein [Streptomyces sp. C]
          Length = 260

 Score = 37.4 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 55/155 (35%), Gaps = 7/155 (4%)

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
           +GT+  V    +  + + + R   +++K+           ++  + +   + K  +    
Sbjct: 52  LGTNKAVAIVGTAGAAVTYARKTAVDVKLAVRIGLAALAGSMGGAALAGGISKDAMRPLV 111

Query: 131 AIFCLLMGILMLKRDR----LYCERKFPDNYVKYI--WGMVTGFLSGALGVGGGIFTNLL 184
               +++  +++ +                 V  I   G+  G   G +G G G F  L 
Sbjct: 112 MGVLVVVAAVVIFKPGFGAAPSASPVSRGRVVLTIALAGLGIGCYDGLIGPGTGTFLVLA 171

Query: 185 ML-FYGASIYKATATSAGVSALIAFPALLVRIYSG 218
           +       +  A+AT+  V+      AL +  Y G
Sbjct: 172 LTALLHLDLVTASATAKIVNCCTNAGALAMFAYQG 206


>gi|298710140|emb|CBJ31852.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 378

 Score = 37.4 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/100 (11%), Positives = 31/100 (31%), Gaps = 6/100 (6%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR---RHGTINMKILKDWI 104
           +VP+        G D    + ++  T  G     +V++  +         ++  ++    
Sbjct: 146 LVPLYILVL---GFDPKHAIPLSNITIFGGAITNTVLNLSKRHPAADRPLVDWDLILVME 202

Query: 105 FVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +     +V S +   +    L     +         L++
Sbjct: 203 PLTIGGALVGSFINKVLPDWILAIMLIVLLAATANRTLRK 242


>gi|218513079|ref|ZP_03509919.1| hypothetical conserved membrane protein [Rhizobium etli 8C-3]
          Length = 71

 Score = 37.4 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 7/78 (8%)

Query: 20 VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
          + +  L  ++    G L G+ GVGGG +M P+L   F        +    A+GT L   A
Sbjct: 1  MTFEPLYSLSGLFVGALVGITGVGGGSLMTPLLVLLF-------GVHPATAVGTDLLYAA 53

Query: 80 PTSVMSFMEHRRHGTINM 97
           T       H  HG +N 
Sbjct: 54 ITKTAGTAVHGMHGRVNW 71


>gi|111019225|ref|YP_702197.1| hypothetical protein RHA1_ro02232 [Rhodococcus jostii RHA1]
 gi|110818755|gb|ABG94039.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 279

 Score = 37.4 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 80/254 (31%), Gaps = 32/254 (12%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC-MHVAMGTSLGVIAPT 81
           +  I+VA   +G ++ + G G  L+  P L       G       M  A+G     +   
Sbjct: 30  VIAILVAGVGAGAINAIVGSGT-LITFPTLV----AFGFPPVTATMSNAIG-----LVAG 79

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            V     +RR        L+  I       V+ S ++ H+ ++       +  +L  IL+
Sbjct: 80  GVSGTWGYRRELAGQGPRLRWQIPASLCGAVLGSWLLLHLPETVFELVVPVLLILALILV 139

Query: 142 LKRDRLYCERKFPDNY----------VKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGA 190
           + + ++    K   ++          +  +     G   G      GI    +M      
Sbjct: 140 VLQPKIQAWAKQRGSHEAGLSPARLTLLTVGTFAVGVYGGYFTAAQGILLMGVMGAILPE 199

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           S+ +       +S ++   A        +            ++  A  +I   S+L   L
Sbjct: 200 SLQRMNGAKNLLSLIVNVVAATAYTLVAFDR----------ISWAAAGLIAVGSLLGGVL 249

Query: 251 ATKLSYMIGKKYLT 264
             +    +    L 
Sbjct: 250 GARYGRRLSPTALR 263


>gi|73538371|ref|YP_298738.1| hypothetical protein Reut_B4544 [Ralstonia eutropha JMP134]
 gi|72121708|gb|AAZ63894.1| Protein of unknown function DUF81 [Ralstonia eutropha JMP134]
          Length = 240

 Score = 37.4 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 85/258 (32%), Gaps = 30/258 (11%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           LI++A    G  S      GG+++VPVL+           + +  A+  S     P  ++
Sbjct: 8   LIVLAGAAIGATSI-----GGVLVVPVLTGI-------AGLPLAEAVAASSLAFVPAGLL 55

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
            +   R    ++               V  +L++  V  +  +   A    + G+  L  
Sbjct: 56  GWRAARVQAGLH-ATPWALHATALSGAVCGALLVHVVPTNGADLWLAALAAVSGLYGLAS 114

Query: 145 D-RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
                 ER  P   +  + G   G  S   G GG +    L+L    +   A A +  + 
Sbjct: 115 LMAAQGERPMPATAMLAVVGFAVGLGSALSGTGGPVLLLPLLLLRRTATAPALAAALAIQ 174

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI--TPLATKLSYMIGKK 261
             IA  A     + G              ++   + +   +++         L+  +  +
Sbjct: 175 LPIALAASAAHWFGG--------------HLPLAVGLKTGALVTAGALAGRFLARKMPAR 220

Query: 262 YLTIGFSMIMFTTSFVFA 279
            L    S+ +   +  +A
Sbjct: 221 ALRGSASLCLLAVAAWYA 238


>gi|229551069|ref|ZP_04439794.1| integral membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|258507032|ref|YP_003169783.1| permease [Lactobacillus rhamnosus GG]
 gi|258538222|ref|YP_003172721.1| permease [Lactobacillus rhamnosus Lc 705]
 gi|229315530|gb|EEN81503.1| integral membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|257146959|emb|CAR85932.1| Permease [Lactobacillus rhamnosus GG]
 gi|257149898|emb|CAR88870.1| Permease [Lactobacillus rhamnosus Lc 705]
 gi|259648403|dbj|BAI40565.1| putative transporter protein [Lactobacillus rhamnosus GG]
 gi|328479512|gb|EGF48764.1| permease [Lactobacillus rhamnosus MTCC 5462]
          Length = 257

 Score = 37.4 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 9/142 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
                ++VA   +G  + L G+   LV  P L       G+       +A  T+   +  
Sbjct: 4   SIFAFLLVAGIGAGLTATLAGL-ASLVSYPALLAI----GVPPV----IANVTNTAALVF 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T V S +          K L   I ++ + ++  S ++     S   K    F +  G+L
Sbjct: 55  TGVGSAVSSLPELRGRGKFLWRLILIVSLGSIFGSALLLIAPASTFEKIVPFFIIAAGLL 114

Query: 141 MLKRDRLYCERKFPDNYVKYIW 162
           +L   +L  +   P   VK + 
Sbjct: 115 LLFSGKLPTQEHRPGEPVKTLT 136


>gi|27366035|ref|NP_761563.1| putative permease [Vibrio vulnificus CMCP6]
 gi|27362235|gb|AAO11090.1| Predicted permease [Vibrio vulnificus CMCP6]
          Length = 252

 Score = 37.4 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 69/202 (34%), Gaps = 20/202 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L+  A    G L+ + G GG  +  P L       GI       VA  T+        
Sbjct: 3   IILLFFAGVFGGMLNSIAG-GGSFITFPALMAV----GIPPV----VANATNTFASCAGY 53

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           +     +RR       IL   I    +  ++ + ++ +  +S   KA     L   IL +
Sbjct: 54  ISGAWGYRRELYAQKNILLKTIVCSLLGGMLGAFLLLNTSESDFLKAIPWLLLFATILFV 113

Query: 143 KRDRLYCE--------RKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
              R+           +     ++  ++ ++     G    G GI T   +   G   ++
Sbjct: 114 FGGRINQAIGHRADRPKHPIILWLPALFLVLVSAYGGFFNAGLGIVTLSYLTLSG---HR 170

Query: 195 ATATSAGVSALIAFPALLVRIY 216
              T  G+  LI+    L+ + 
Sbjct: 171 DIITMNGLKLLISTSVSLIAVI 192


>gi|254786490|ref|YP_003073919.1| hypothetical protein TERTU_2490 [Teredinibacter turnerae T7901]
 gi|237685320|gb|ACR12584.1| conserved hypothetical protein [Teredinibacter turnerae T7901]
          Length = 336

 Score = 37.4 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 91/271 (33%), Gaps = 41/271 (15%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            LI     L   ++G   +GGG V  P L+K            +  +   ++  +  TS 
Sbjct: 41  WLIAPIMALGSFVAGATFLGGGAVAFPALTKILHA-----DPSVAKSFSLAIQSVGMTS- 94

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVT-SLMISHVDKSFLNKAFAIFCL-LMGILM 141
            S     R   +    +  ++        ++ +++  ++  + L   F +F L  + I +
Sbjct: 95  ASLYILLRVRNLPWNFIGIFLPPAFAGIALSLAIIEPYIAATDLRVMFTLFVLGFLAIYL 154

Query: 142 LK-------------RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
                            RL  +      ++  +   + G  +        I   LL L++
Sbjct: 155 WVYRDRKTHYVDIPPLSRLDIQLTLKAGFLGGVLAGLLGSGADL------IAFCLLALYF 208

Query: 189 GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILIT 248
              +  AT  S  V A ++   +L     G     LP            LI  P+ +L  
Sbjct: 209 RLDLKLATQCSVIVMASVSLVGVL---LQGTVFQTLPAELT-----PLWLIAAPVVLLGA 260

Query: 249 PLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           P+  +    I  + L      ++F  S VFA
Sbjct: 261 PIGAEFCRRIKPRNL------LLFVCSIVFA 285


>gi|118578508|ref|YP_899758.1| hypothetical protein Ppro_0060 [Pelobacter propionicus DSM 2379]
 gi|118501218|gb|ABK97700.1| protein of unknown function DUF81 [Pelobacter propionicus DSM 2379]
          Length = 250

 Score = 37.4 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 58/167 (34%), Gaps = 22/167 (13%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKA-FQLMGIDDSICMHVAMGTSLGVIAPT 81
           I  + +A+ +   +    G+  G V+ P L    + +  +  S+ +  A+G         
Sbjct: 3   IAYLSLAALIMEFIDSSLGMMYGTVLSPFLLLMNYSVADVVPSLLISQAVG--------- 53

Query: 82  SVMSFMEHRRHGTINMK-------ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
             ++   H RHG  +         I    I+     +++   +   +    L     +  
Sbjct: 54  GFIASWRHHRHGNGDFNSGTTDRRIAVTLIWFGVFASLIGVSLSVSIPPLILKSYIGLLV 113

Query: 135 LLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT 181
            L+G+L+L    L        N   Y+ G V+ F     G G G   
Sbjct: 114 TLIGLLILWGRSL-----VLTNARVYLLGSVSAFNKALSGGGFGPLV 155


>gi|149201200|ref|ZP_01878175.1| hypothetical protein RTM1035_16282 [Roseovarius sp. TM1035]
 gi|149145533|gb|EDM33559.1| hypothetical protein RTM1035_16282 [Roseovarius sp. TM1035]
          Length = 248

 Score = 37.4 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 79/259 (30%), Gaps = 21/259 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V+ + + + A+ L+G   G FG G       +L+           +   +A+G  L V+ 
Sbjct: 3   VEVVAIGVFAALLAGVSKGGFGSGASFAGAAILALF---------VPPAMALGIMLPVLM 53

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF-CLLMG 138
              V +   + R        +   I        +  L     D   L         + + 
Sbjct: 54  LIDVATLRPYWRQWGRL--EVTMLILGGVPGIGLGMLFYRSADADLLRLLIGGIALIFVL 111

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
              + + R+    + P      +   +    +  +   GG    + +L  G    +  AT
Sbjct: 112 WQTVLKARVMRRGQAPLPGWSGVLAGLVAGFTSFVSHAGGPPAAVYLLSRGLDKTRYQAT 171

Query: 199 SAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           +  +  +      +     G               +   LI+ P ++L   +  +   ++
Sbjct: 172 TVLMFFVFNIVKAVPYGMLGLFTRET---------LMIDLILAPFALLGAWIGVRAHRIM 222

Query: 259 GKKYLTIGFSMIMFTTSFV 277
            ++       +++  T   
Sbjct: 223 PERAFFAVTYVLLTITGAK 241


>gi|91776519|ref|YP_546275.1| hypothetical protein Mfla_2167 [Methylobacillus flagellatus KT]
 gi|91710506|gb|ABE50434.1| protein of unknown function DUF81 [Methylobacillus flagellatus KT]
          Length = 268

 Score = 37.4 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 58/181 (32%), Gaps = 24/181 (13%)

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-- 140
            +  ++  + G +  +     +F+  + + +   +   +   +L  +F+I  L+M     
Sbjct: 57  FVGALQSAKSGHLRWRAALFIVFIGSLASPLGQWIAFQLSHQWLVYSFSILMLVMASNLF 116

Query: 141 ---------------------MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI 179
                                ML                    G+ +G   G  GVG G 
Sbjct: 117 RQAFAMVGSRCSDNDSIQRPCMLSEKTGRLIWTKKCAAKLTAAGISSGVFLGLYGVGVGF 176

Query: 180 FTNLLMLFY-GASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
                +      S+   TATS  V AL++       +  G  +N      +G   +GAV+
Sbjct: 177 ILVPALSRSTNISVQATTATSLMVIALMSSIVAGGMVLDGVTINQTGLTFIGAACVGAVI 236

Query: 239 I 239
            
Sbjct: 237 G 237



 Score = 36.6 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 44/118 (37%), Gaps = 7/118 (5%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +  A   SG   GL+GVG G ++VP LS+         +I +     TSL VIA  S + 
Sbjct: 156 LTAAGISSGVFLGLYGVGVGFILVPALSR-------STNISVQATTATSLMVIALMSSIV 208

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                  G    +    +I    +  V+  L+   +    L        ++  IL   
Sbjct: 209 AGGMVLDGVTINQTGLTFIGAACVGAVIGRLLSLRLSSLTLKWGLGTLMVITAILFAL 266


>gi|33861537|ref|NP_893098.1| hypothetical protein PMM0981 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|33634114|emb|CAE19440.1| conserved hypothetical protein [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 270

 Score = 37.4 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 88/261 (33%), Gaps = 31/261 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            LI + SFLS T S + G G GL+ +P L            +  + A+ +         +
Sbjct: 20  ALIFLISFLSNTFSAISGGGAGLIQLPALILF--------GLPYYQALASHKVATVALGL 71

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              + + ++   ++ +L   +F      ++ S ++  + + +L        +++ I    
Sbjct: 72  GGSIRNFKYIRNDIFVLWQILFFGTPGVILGSNIVKFLSEQYLFLILGFISIVLAIYSFC 131

Query: 144 RDR---------LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK 194
           +           +  + +       +  G++ G +S      G       +L     +  
Sbjct: 132 KPSLGLNSTDNIINSQLELKFIIPIFFIGILNGSVSS-----GTGLLVTFLLIKIFKMDF 186

Query: 195 ATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKL 254
             A S     +  F   +   +            +G++    ++I++  S         +
Sbjct: 187 LRAVSLTFFTVGIFWNAIGAYFLS---------KIGYIPTDILVILILGSFAGGYFGAHM 237

Query: 255 SYMIGKKYLTIGFSMIMFTTS 275
           S + G K +   F+++     
Sbjct: 238 SNLKGNKLIKNTFTVVCLLVG 258


>gi|303249078|ref|ZP_07335321.1| protein of unknown function DUF81 [Desulfovibrio fructosovorans JJ]
 gi|302489543|gb|EFL49485.1| protein of unknown function DUF81 [Desulfovibrio fructosovorans JJ]
          Length = 248

 Score = 37.4 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 49/154 (31%), Gaps = 11/154 (7%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             + ++ +A+   G   GL G G  LV +P+L           ++ M + + T +  +  
Sbjct: 4   SILIVLALAALCGGFTQGLAGFGSTLVALPML-----------AMVMDLRVATPVCCLLA 52

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
            ++   +  +  G I    L   +        V +  +  V    L  A  +  L   I 
Sbjct: 53  VALNIILTGKLRGQIVWPALALLLGASLPGMAVGAHALRSVSDVLLKGALGLAVLAFVIH 112

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALG 174
            L+R             +        G   G  G
Sbjct: 113 ALRRREAGPRAGAGLGLLAGFTAGCMGAAIGVNG 146


>gi|239820282|ref|YP_002947467.1| protein of unknown function DUF81 [Variovorax paradoxus S110]
 gi|239805135|gb|ACS22201.1| protein of unknown function DUF81 [Variovorax paradoxus S110]
          Length = 251

 Score = 37.4 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 70/199 (35%), Gaps = 13/199 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + + +     F++  + G+ G G  +V VP+L +   L      + +   + TS+     
Sbjct: 6   ELVAVAAPIVFVAYAVFGMTGFGAAMVAVPMLVQFIPLQVAVPLVVLFDLVATSM----- 60

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
                 +  +  G+++   LK  +  + +   +  +++ +V   +      +F L++ + 
Sbjct: 61  ------VGGKNWGSVSTLELKHLLPPMLLGIAIGVVVLHNVGPRWPLVGLGVFVLVVSVR 114

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
            L         +          GM  G  S   G GG     + +    + + +  AT A
Sbjct: 115 NLLASGSAARPQL-ARVWSLPLGMAGGVFSALFGTGG-PIYTIYLARRLSDVDRFRATIA 172

Query: 201 GVSALIAFPALLVRIYSGW 219
            V  L           +G 
Sbjct: 173 VVILLSGISRAAAFGVAGL 191


>gi|329897435|ref|ZP_08272090.1| Membrane protein, putative [gamma proteobacterium IMCC3088]
 gi|328921195|gb|EGG28597.1| Membrane protein, putative [gamma proteobacterium IMCC3088]
          Length = 255

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 54/163 (33%), Gaps = 17/163 (10%)

Query: 33  SGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           SG L+ + G GG L+ VP L            +   VA GT+   I   ++ +    R  
Sbjct: 18  SGFLNVIAG-GGSLLTVPALVFL--------GLPGPVANGTNRIGILLQNLTAIWAFRNR 68

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
           G    K+            +  +     ++    N+  A   + + I+M  +       +
Sbjct: 69  GFSAFKLSFTLSLATLPGALAGAYAGVKLEGELFNQVLAGVMIGVMIIMQFQSSWKTNEQ 128

Query: 153 F--------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
                    P     ++   +TG   G + +G G     ++  
Sbjct: 129 VQERGDISKPRLIAGHLLMALTGVWGGFIQIGVGFLIMPILSR 171


>gi|312869413|ref|ZP_07729574.1| putative membrane protein [Lactobacillus oris PB013-T2-3]
 gi|311095076|gb|EFQ53359.1| putative membrane protein [Lactobacillus oris PB013-T2-3]
          Length = 261

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 46/124 (37%), Gaps = 6/124 (4%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           Y  L  +  FL G  +G F  G G++M+ +L+   +      +  +          +  T
Sbjct: 142 YTALTALGIFLVGVYAGYFNAGAGIMMLTLLAVVNRQKTFAVNNALKN------VAMTVT 195

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           + ++ +      TI    +        +  ++  +++  V    +        L++ I +
Sbjct: 196 NTIAVIIFAFETTIEWNFVIPLFIGNIVGGILGPIIVRRVPSRLMQIIVGCGALVLAISL 255

Query: 142 LKRD 145
           L R+
Sbjct: 256 LVRN 259



 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 28/228 (12%), Positives = 76/228 (33%), Gaps = 24/228 (10%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +   +++   L+G +S   G+   L+  P L     +MG+       +A  TS     
Sbjct: 4   ITFFITLVIVGVLAGIVSAAAGL-ASLISYPALL----MMGLPPV----MANVTSAWSTV 54

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
            ++  S     +    + + +   + ++ +  V+ ++++  +   F  +       + G+
Sbjct: 55  GSAYSSIAASTKELRHDKRQMWLIVPLVFVGAVLGAILLFTLPGKFFQELVPFCIGIAGL 114

Query: 140 LMLKRDRLY------------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
           +++   R                R      +  +   + G  +G    G GI    L+  
Sbjct: 115 ILIFPHRPRQAQEAMAANSHSLGRHPLYTALTALGIFLVGVYAGYFNAGAGIMMLTLLAV 174

Query: 188 YGASIYKATATS---AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFV 232
                  A   +     ++       ++    +    N + P  +G +
Sbjct: 175 VNRQKTFAVNNALKNVAMTVTNTIAVIIFAFETTIEWNFVIPLFIGNI 222


>gi|27529605|emb|CAD55546.1| hypothetical protein [Wolinella succinogenes]
          Length = 98

 Score = 37.0 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 9/103 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  + ++ + +F++G +  + G GGGL+ +P L       GI  +     A+GT+     
Sbjct: 5   VGILVILGLCAFVAGFVDSIAG-GGGLITIPALLAV----GIPPAQ----ALGTNKLQAT 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD 122
             S  + +   R G I +  +K  I  + I + V ++ +  +D
Sbjct: 56  FGSFSATLYFWRRGYIELAEMKGAILAVFIASSVGTIFVQFID 98


>gi|116073786|ref|ZP_01471048.1| hypothetical protein RS9916_35087 [Synechococcus sp. RS9916]
 gi|116069091|gb|EAU74843.1| hypothetical protein RS9916_35087 [Synechococcus sp. RS9916]
          Length = 254

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 86/244 (35%), Gaps = 30/244 (12%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +  I L +    + G  +     GG  VM P L       GI       +A  TS   I 
Sbjct: 5   IPLIGLGLALGAVCGFFNA-VASGGSAVMFPALLAI----GIPAD----IANATSRLPIL 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
             S  +     R   I  + +     V    +++ + + + ++ S       I  L+  +
Sbjct: 56  LGSTTALWSFERAKLIPWQSVLRLSIVFLPFSLLGAEIATVMNTSISLLLIRISILMALV 115

Query: 140 LMLKRDRLYCERKFPD--------NYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGA 190
            +L R +   +R+  +            ++     GF +G + V   IF    L+L  G 
Sbjct: 116 FLLIRPQQLLKRRPDNGDKAYIQIRLSLWLLTAFCGFWAGLIIVDAAIFLLLSLVLVGGV 175

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           S+ +A     G+  L +    L+   SG        W +G       + ++  SI  + +
Sbjct: 176 SLRQAVPVKTGLVFLFSISTFLIFARSG-----KVEWQIG-------IPMVIGSIFGSLI 223

Query: 251 ATKL 254
             K+
Sbjct: 224 GAKV 227


>gi|212703331|ref|ZP_03311459.1| hypothetical protein DESPIG_01374 [Desulfovibrio piger ATCC 29098]
 gi|212673241|gb|EEB33724.1| hypothetical protein DESPIG_01374 [Desulfovibrio piger ATCC 29098]
          Length = 246

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 49/146 (33%), Gaps = 13/146 (8%)

Query: 32  LSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRR 91
           L G ++G+ G+G G+  +P++                +   + +  I    + + +  + 
Sbjct: 15  LGGIVNGISGLGAGIFALPIVLLV-----------TDIKTASLITCIICIPLPAILGWQF 63

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCER 151
                M  L+  +       ++   ++  +    L     +  +   I  L   R    R
Sbjct: 64  RHYYRMADLRLLLLGTIPGALLGVALLPLIPARVLQIGLGLMLMAHMIWHLLAHRPGPLR 123

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGG 177
                    + G V GF+    G+GG
Sbjct: 124 SPL--LWGSVSGAVAGFIQAVSGLGG 147


>gi|298528924|ref|ZP_07016327.1| protein of unknown function DUF81 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298510360|gb|EFI34263.1| protein of unknown function DUF81 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 364

 Score = 37.0 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 41/120 (34%), Gaps = 7/120 (5%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
            +     L G  SG FG+G G  +VP          +     + VA   S+ ++     +
Sbjct: 213 WLFAGILLVGAGSGFFGMGAGWAIVP-------FQNVIAGTPVKVAAANSVVLLGMGDCI 265

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           +   +   G +       W+    +  ++ +L++  +   F+              ++ R
Sbjct: 266 AVWPYFMMGALIPMFAAPWLAGQVVGGLLGALVLVQIKAGFVRWLLIGLMGFSCWGLITR 325


>gi|317153824|ref|YP_004121872.1| hypothetical protein Daes_2120 [Desulfovibrio aespoeensis Aspo-2]
 gi|316944075|gb|ADU63126.1| protein of unknown function DUF81 [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 313

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 43/125 (34%), Gaps = 9/125 (7%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           + + +    + + GV G  +++P             S   H      L  I        +
Sbjct: 17  LVAMVVSFFTSMGGVSGAFLLLPFQMSFLGYTAPSVSATNH------LFNIVAIP-SGVI 69

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLM-ISHVDKSFLNKAF-AIFCLLMGILMLKRD 145
            + R G +   +    +       ++ +++ ++ +  +   K F A   L +GI M++  
Sbjct: 70  RYLREGRMVWPLTWIVVAGTLPGVLIGAVVRVTWLPDADSFKLFAAAVLLYIGIKMVRDL 129

Query: 146 RLYCE 150
               +
Sbjct: 130 TGKAK 134


>gi|237745548|ref|ZP_04576028.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
 gi|229376899|gb|EEO26990.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
          Length = 461

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 46/149 (30%), Gaps = 17/149 (11%)

Query: 103 WIFVLPITTVVTSLMISHVDKSF--LNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY 160
              ++ I   V       + K+F  L  A  I  +   +          + +        
Sbjct: 82  MGPIMGIGYGVGIYDFRLIHKAFKNLAIATVISFITSALYFYITPLSGAQSELLARTSPN 141

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
           IW ++     G  G+ G            +++    A +  +   I   A          
Sbjct: 142 IWDLLIALFGGMAGIIGAT------RKEKSNVIPGVAIATALMPPI-CTAAYGF------ 188

Query: 221 LNGLPPWSLG--FVNIGAVLIILPISILI 247
           +NG   + LG  ++ +   + I   SILI
Sbjct: 189 VNGNVAYFLGASYLYLLNCIYIAVSSILI 217


>gi|324006826|gb|EGB76045.1| hypothetical protein HMPREF9532_03480 [Escherichia coli MS 57-2]
          Length = 198

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 11/129 (8%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +C++I   FL   +    G GGGL  +P+++               V M T L VI  
Sbjct: 17  NVVCIVIALMFLYTFVGICAGFGGGLTTMPLVTLMLP-----------VKMATPLSVIVG 65

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T+   +         + +     I    +   V    +S++   F+      F +L    
Sbjct: 66  TATALYATWLSRKETDWRSAMVLIIFSFLGIPVGLYALSYLPDHFMKVGLGGFLILYSFY 125

Query: 141 MLKRDRLYC 149
            +   RL  
Sbjct: 126 SMFIPRLPI 134


>gi|296120019|ref|ZP_06838573.1| permease [Corynebacterium ammoniagenes DSM 20306]
 gi|295967173|gb|EFG80444.1| permease [Corynebacterium ammoniagenes DSM 20306]
          Length = 252

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 12/164 (7%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           V+    +I+ A  +      + G+G GL+  PVLS     +G    + M   +       
Sbjct: 3   VLTIAIIILAAVLIGAFFQRITGMGVGLLGGPVLSI---FLGPVQGVTMVNGLS------ 53

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
              +V +    R+    + K  +     L + ++    +I  +D   L     +F LL G
Sbjct: 54  IINAVNNAWAVRKRT--DWKRFRIISAALILGSLPAVAVIHFLDGPVLLIGIGVFVLL-G 110

Query: 139 ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
           + +        +           +GM  GF+S   G+ G   T 
Sbjct: 111 LGISLFPAEKFKIPVEAKGPLVAFGMAAGFMSTIAGIAGPSLTI 154


>gi|121605325|ref|YP_982654.1| hypothetical protein Pnap_2426 [Polaromonas naphthalenivorans CJ2]
 gi|120594294|gb|ABM37733.1| protein of unknown function DUF81 [Polaromonas naphthalenivorans
           CJ2]
          Length = 263

 Score = 37.0 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 45/116 (38%), Gaps = 6/116 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           IV   + GTL  L  VG G + V VL   +  + +   +   +A         P ++++ 
Sbjct: 152 IVFGAVIGTLVTLTSVGAGAIGVIVLMLLYPALPLPRIVAADIAHA------VPLTLVAG 205

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + H   G+++  +L   +        + S ++       +    ++     G+ ++
Sbjct: 206 LGHASIGSVDWPLLAKLLAGSLPGIWIGSHLMRRTSDRVIRSLLSLLLAYAGMKLI 261


>gi|261409969|ref|YP_003246210.1| hypothetical protein GYMC10_6200 [Paenibacillus sp. Y412MC10]
 gi|261286432|gb|ACX68403.1| protein of unknown function DUF81 [Paenibacillus sp. Y412MC10]
          Length = 253

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 78/203 (38%), Gaps = 22/203 (10%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L  V  F++  L    G G  ++  P L   F+      +  + + +  SL       
Sbjct: 19  IILFAVIIFVASILQTSTGFGFSILATPFLLLLFR-----PAEAIQINLILSLV------ 67

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + +  +    I+  ILK  +        +  ++ S +D  +L    ++  L + ++++
Sbjct: 68  ISAALVAKIRKDIDYGILKRLVIGSAAGLPLGIVVFSLIDIGYLKLGVSLIILALTVMLM 127

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT--ATSA 200
            + R+   R           G ++G L+ ++G+ G     LL+ F G    KA    T+ 
Sbjct: 128 LKFRINQSR-----GRDLAVGGLSGSLTTSIGMPG---PPLLLYFSGTDTQKAKLRGTTL 179

Query: 201 GVSALI-AFPALLVRIYSGWGLN 222
                I +   ++  I +G    
Sbjct: 180 AFYLFIYSLSLIIQVIVAGTSKT 202


>gi|199599502|ref|ZP_03212892.1| Predicted permease [Lactobacillus rhamnosus HN001]
 gi|199589604|gb|EDY97720.1| Predicted permease [Lactobacillus rhamnosus HN001]
          Length = 257

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 9/142 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
                ++VA   +G  + L G+   LV  P L       G+       +A  T+   +  
Sbjct: 4   SIFAFLLVAGIGAGLTATLAGL-ASLVSYPALLAI----GVPPV----IANVTNTAALVF 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T V S +          K L   I ++ + ++  S ++     S   K    F +  G+L
Sbjct: 55  TGVGSAVSSLPELRGRGKFLWRLILIVSLGSIFGSALLLIAPASTFEKIVPFFIIAAGLL 114

Query: 141 MLKRDRLYCERKFPDNYVKYIW 162
           +L   +L  +   P    K + 
Sbjct: 115 LLFSGKLPTQEHRPGEPAKTLT 136


>gi|110635510|ref|YP_675718.1| hypothetical protein Meso_3181 [Mesorhizobium sp. BNC1]
 gi|110286494|gb|ABG64553.1| protein of unknown function DUF81 [Chelativorans sp. BNC1]
          Length = 257

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 79/256 (30%), Gaps = 20/256 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +    I A  L G   G  G    L+ VP+++           +    A    L ++   
Sbjct: 10  FYLAAIPAVILVGLSKGGLGGAMALIGVPLMALV---------VSPVQAAAIMLPILIVM 60

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            ++S       G  + ++L   +    +   +   M + V +  +     I  LL  +  
Sbjct: 61  DIVSLWAW--RGYYDRRLLAIMLPGALVGIGIGWQMAAVVTEDHVRLIVGITTLLFFLRW 118

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
                   ER    +  K ++       +  +   GG    +  L         T TS  
Sbjct: 119 AADKLRKSERIADHSRAKGLFWGAVSGFTSFVAHAGGPPYQVYALPLKHDPKLYTGTSVI 178

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
             A++    L+     G              N+ A LI++P++ L T     + + I  +
Sbjct: 179 FFAVVNAVKLIPYFALGQFDAT---------NLTASLILVPVAPLATLAGAWVIHRIKPE 229

Query: 262 YLTIGFSMIMFTTSFV 277
                   +M   S  
Sbjct: 230 IFYPLMYSMMLVVSLK 245


>gi|218514936|ref|ZP_03511776.1| putative transmembrane permease protein [Rhizobium etli 8C-3]
          Length = 199

 Score = 37.0 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 46/181 (25%), Gaps = 19/181 (10%)

Query: 104 IFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI-LMLKRDRLYCERKFPDNYVKYIW 162
                +   +     + V  + L        +L  +            R  P    + I 
Sbjct: 23  CPGAILGIGLGWATSALVPGNILRIVIGAVTILFCLRYFWNNFGPGAGRVIPPRGQRPIA 82

Query: 163 GMVTGFLSG---ALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGW 219
               G  SG    +   GG    +  L       + T TS    A++    L+     G 
Sbjct: 83  AGFWGAFSGYGSFVAHAGGAPFQVYALPLKLQPREYTGTSVRFFAILNAVKLIPYFALGQ 142

Query: 220 GLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLT-IGFSMIMFTTSFVF 278
                             L      +   PL   L+     + +    F   M+  +F+ 
Sbjct: 143 LDTQN-------------LATSATLLPFAPL-ATLAGAWCVRRMKPEIFYPFMYAMAFIA 188

Query: 279 A 279
           A
Sbjct: 189 A 189


>gi|328476362|gb|EGF46992.1| integral membrane protein [Lactobacillus rhamnosus MTCC 5462]
          Length = 134

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  V   L G   G FG G GL++V VLS+  +      +   ++A   SL     TS+
Sbjct: 18  WLGYVLVMLVGIYVGYFGAGAGLLLVAVLSRLVEGPYATYNAMRNLA---SLVNNLVTSI 74

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           M          I   +L      L     +  +++  +    +  A  IF L + + +  
Sbjct: 75  MFIFS----MPIAWGVLIPVCIGLFAGGFLGPVIVRLIPSRIIKTAVGIFALGLAVFLFY 130

Query: 144 R 144
           +
Sbjct: 131 Q 131


>gi|168335056|ref|ZP_02693167.1| hypothetical protein Epulo_08473 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 262

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 73/194 (37%), Gaps = 24/194 (12%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L ++    S T+  + G+GGG+++ PVL    Q       I        S   +   S++
Sbjct: 6   LYLLVGLCSTTIGAISGLGGGVIIKPVLDALGQYDMATIGIL-------SGCTLIAMSIV 58

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA------------FAI 132
           S  +    G +  + +K  +  L +  ++   +     ++F                 A+
Sbjct: 59  SLTKKFISG-VKFEYIK--LISLSVGAILGGFVGKAAFQNFEKIIPVDTAKIIQSICLAL 115

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYGAS 191
             +++ +  + + ++       +  +  I G++ G ++  LG+GGG     ++++ +   
Sbjct: 116 LMIVILLFSIYKSKIK-TFNVTNPIICLIAGLILGSVAVFLGIGGGPINVAVIIILFSCD 174

Query: 192 IYKATATSAGVSAL 205
              A   S      
Sbjct: 175 AKDAAIYSIFTIFF 188


>gi|318040545|ref|ZP_07972501.1| RND family multidrug efflux protein [Synechococcus sp. CB0101]
          Length = 1137

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 2/128 (1%)

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK 159
              ++ VL       ++          + A + F  L    ML    L  E + P     
Sbjct: 456 FAVFLPVLFFPGATGTIYKQFAATVIFSIAISTFNALTFSPMLSALLLGRESEPPSRRGY 515

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA--TSAGVSALIAFPALLVRIYS 217
            + G V GF+ G L +GGG    LL     A++    +  +S  ++  +A    +  +  
Sbjct: 516 AVAGTVIGFIYGLLVIGGGAALVLLPFAAAAALGLVLSRISSRALTLPMAAGGAISGLVL 575

Query: 218 GWGLNGLP 225
               N LP
Sbjct: 576 VGVTNLLP 583


>gi|46139803|ref|XP_391592.1| hypothetical protein FG11416.1 [Gibberella zeae PH-1]
          Length = 1254

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 51/157 (32%), Gaps = 34/157 (21%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFG--VGGGLVMVPVL----SKAFQLMGIDD 63
           +    S    ++ + +   A+ +    SG+    VG  ++ VPV+       F       
Sbjct: 284 ITPPFSYQDSLNLLLVFNAANLVGRLGSGILADKVGALVIFVPVMASMTVILFAW----- 338

Query: 64  SICMHVAMGTSLGVIAPTSVMSFME----------------HRRHGTINMKILKDWI-FV 106
                +A+GTSL +   T     +                   +   + M ++       
Sbjct: 339 -----IAVGTSLAMYVWTVFSGILSGGVQSLFPAGLSYLTTSTKKPGMRMGMVFGLGSVA 393

Query: 107 LPITTVVTSLMISHVDKSFL-NKAFAIFCLLMGILML 142
             I   +   +I  ++  +L  + FA   + M  + L
Sbjct: 394 SLIGAPIGGALIGAMNGRYLGAQTFAGVTMAMAAIFL 430



 Score = 36.2 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 20/111 (18%)

Query: 178 GIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL---------PPWS 228
              T +L  +       A  TS  +     F  +L          GL         P   
Sbjct: 329 ASMTVILFAW------IAVGTSLAMYVWTVFSGILSGGVQSLFPAGLSYLTTSTKKPGMR 382

Query: 229 LGFVNIGAVLIILPISILITPLATKLSYMIGKKYL-TIGFSMIMFTTSFVF 278
           +G V      +    S++  P+   L   +  +YL    F+ +    + +F
Sbjct: 383 MGMV----FGLGSVASLIGAPIGGALIGAMNGRYLGAQTFAGVTMAMAAIF 429


>gi|330469451|ref|YP_004407194.1| hypothetical protein VAB18032_27606 [Verrucosispora maris
           AB-18-032]
 gi|328812422|gb|AEB46594.1| hypothetical protein VAB18032_27606 [Verrucosispora maris
           AB-18-032]
          Length = 253

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             I V   L+    G FG   G+++V  L+        D ++    A+   L  I   + 
Sbjct: 137 LTIQVVVALASVYGGYFGAAVGVMLVAALALVL-----DATLARVSAIKNLLSAIIGLTT 191

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++       G +N   +        +     + ++  +    L     +F   +G+ +L 
Sbjct: 192 VAVFA--LAGPVNWAGVALLAPATLVGGYAGARLVRRLPSKLLKAIIVVFGTTIGLYLLW 249

Query: 144 R 144
           R
Sbjct: 250 R 250


>gi|218678357|ref|ZP_03526254.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 894]
          Length = 110

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 46/115 (40%), Gaps = 6/115 (5%)

Query: 30  SFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEH 89
            FL G L  L  VG G + V +L   +  + + +       +G+ +    P +++  M +
Sbjct: 2   GFLLGVLVTLTSVGAGALGVTILLVLYPRLDVREI------VGSDIVHAVPLTLIGGMGY 55

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
              G I+  +L   +       ++ SL+   + +  +    A+   ++   +L  
Sbjct: 56  WLIGEIDWPMLFALLVGSIPGIIIGSLLAPKLHERTIRIVLAVTLAVVAWKLLAS 110


>gi|212716540|ref|ZP_03324668.1| hypothetical protein BIFCAT_01467 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660527|gb|EEB21102.1| hypothetical protein BIFCAT_01467 [Bifidobacterium catenulatum DSM
           16992]
          Length = 180

 Score = 37.0 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 7/95 (7%)

Query: 49  VPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLP 108
           VP LS  F    +       +A GTSL  + P S+ + + + +   +++K       +  
Sbjct: 79  VPALSILFGASDL-------IARGTSLLAMFPNSITTSVANMKRKLVHIKAGLIIGVIAA 131

Query: 109 ITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           +TT   + +   V        FA +  ++ +    
Sbjct: 132 LTTPFGTWVAGAVSPRAGAIMFAAYLCVLLVRSFF 166


>gi|145515812|ref|XP_001443800.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124411200|emb|CAK76403.1| unnamed protein product [Paramecium tetraurelia]
          Length = 439

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 8/88 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
                +   L+G  +G  G+GGGL+MV +L            I    A  T+       +
Sbjct: 301 FWFYYLGGCLAGFSTGFIGMGGGLIMVSILLH--------KKIIAREAAATAGFGTFMIA 352

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPIT 110
           + S ++     TI    +  +  +  I 
Sbjct: 353 LNSLIQLFLQKTITTGQMFTFFGLGIIG 380



 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 31/56 (55%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
           +  Y+ G + GF +G +G+GGG+    ++L       +A AT+   + +IA  +L+
Sbjct: 302 WFYYLGGCLAGFSTGFIGMGGGLIMVSILLHKKIIAREAAATAGFGTFMIALNSLI 357


>gi|167837642|ref|ZP_02464525.1| hypothetical protein Bpse38_14230 [Burkholderia thailandensis
           MSMB43]
          Length = 264

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 91/253 (35%), Gaps = 33/253 (13%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L  ++    G L GL GVGGG +M P+L   F       ++    A+GT L   A T  
Sbjct: 8   LLYSLSGLFVGFLVGLTGVGGGSLMTPILVLLF-------NVHPATAVGTDLLYAAITKA 60

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMI------SHVDKSFLNKAFAIFCLLM 137
                H   GT+  +I             +T   +      S      +        LL 
Sbjct: 61  TGTFVHGLKGTVEWRITGRLAAGSVPAAAITLWFLHSHGMHSQETSRMIQFVLGAALLLT 120

Query: 138 GILMLKRDRLYC-----ERKFPDNYVKYIW-----GMVTGFLSGALGVGGGIFTNLLMLF 187
            + +L R +L        R  P +  + +      G V G L     VG G     ++L 
Sbjct: 121 SLSLLFRPQLAAFAAKRTRALPPSPARTLAATVLTGAVLGVLVSLTSVGAGAIGVTVLLL 180

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILI 247
               +Y A +T+  V + IA    L        + G+  W LG V+   ++ +L  S+  
Sbjct: 181 ----LYPALSTTRIVGSDIAHAVPLTL------VAGVGHWMLGSVDWSMLVSLLIGSVPG 230

Query: 248 TPLATKLSYMIGK 260
             + + LS    +
Sbjct: 231 IVVGSHLSARAPE 243



 Score = 35.4 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 48/118 (40%), Gaps = 6/118 (5%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   + G L  L  VG G + V VL   +       ++     +G+ +    P ++++ 
Sbjct: 153 VLTGAVLGVLVSLTSVGAGAIGVTVLLLLY------PALSTTRIVGSDIAHAVPLTLVAG 206

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKR 144
           + H   G+++  +L   +       VV S + +   +  L +  A   + +G  ++  
Sbjct: 207 VGHWMLGSVDWSMLVSLLIGSVPGIVVGSHLSARAPEGLLRRLLATTLVAVGAKLVLS 264


>gi|327400335|ref|YP_004341174.1| hypothetical protein Arcve_0427 [Archaeoglobus veneficus SNP6]
 gi|327315843|gb|AEA46459.1| protein of unknown function DUF81 [Archaeoglobus veneficus SNP6]
          Length = 331

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 7/126 (5%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D  V    + I+     G +SG+FG+G G  MVPV +             + VA   S  
Sbjct: 203 DYKVTRSPVAILLFCGVGLISGMFGLGAGWAMVPVFNLVMLA-------PLKVAAACSKV 255

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
           +I      +   +   G I        +  L + T++ + ++  V   F+          
Sbjct: 256 LIGIGDTAAIWPYIMGGGIFPLFAVPCMIGLIVGTLIGAKIMLRVKAGFVRYLIIAIMFG 315

Query: 137 MGILML 142
            G+ +L
Sbjct: 316 SGLKLL 321


>gi|227488968|ref|ZP_03919284.1| membrane protein [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227091044|gb|EEI26356.1| membrane protein [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 250

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 67/182 (36%), Gaps = 18/182 (9%)

Query: 102 DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL-YCERKFPDNYVKY 160
            +  +  +   + +L+ S+VDK+ +    A+  +L+G  +L +        ++P   V+ 
Sbjct: 73  RYAPLALVGAGLGALVASNVDKAIMRPIIAVALVLVGAFVLFKPSFGQSSTRYPHTTVRV 132

Query: 161 I----WGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRI 215
           +      +  G   G  G G G+F  +      G    +  A +   +      AL+V  
Sbjct: 133 VAICAAVLAIGIYDGTFGPGTGVFFIMAFTSIRGGDFLENAAWAKIANTFTNLGALIVFS 192

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           + G  L GL             L +   +++   +  +L    G   L I   +++   S
Sbjct: 193 FHGEILWGLG------------LALAVANVIGAQIGARLVMAKGAGMLRILILVLVVVMS 240

Query: 276 FV 277
             
Sbjct: 241 AK 242


>gi|71275147|ref|ZP_00651434.1| similar to permeases [Xylella fastidiosa Dixon]
 gi|71898228|ref|ZP_00680402.1| similar to permeases [Xylella fastidiosa Ann-1]
 gi|170731138|ref|YP_001776571.1| permease-like protein [Xylella fastidiosa M12]
 gi|71163956|gb|EAO13671.1| similar to permeases [Xylella fastidiosa Dixon]
 gi|71731967|gb|EAO34024.1| similar to permeases [Xylella fastidiosa Ann-1]
 gi|167965931|gb|ACA12941.1| permeases-like protein [Xylella fastidiosa M12]
          Length = 226

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 47/102 (46%), Gaps = 9/102 (8%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
            ++VP L  A ++  I+       A+G+SL  +    +++ + + RH  ++  I  ++I 
Sbjct: 44  FLIVPALIFATRMPTIN-------AIGSSLLAVGTFGLITTLNYARHDLVDWTIAMEFIV 96

Query: 106 VLPITTVVTSLMISHVDK--SFLNKAFAIFCLLMGILMLKRD 145
                  + +L+ + +      LN+ F +  + + I ++ R 
Sbjct: 97  GGITGGGLGTLLATRLSASKHLLNRVFGLIVIAVAIYVIWRS 138


>gi|17227599|ref|NP_484147.1| hypothetical protein alr0103 [Nostoc sp. PCC 7120]
 gi|17135081|dbj|BAB77627.1| alr0103 [Nostoc sp. PCC 7120]
          Length = 779

 Score = 37.0 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 47/129 (36%), Gaps = 21/129 (16%)

Query: 51  VLSKAFQLMGIDDSICMHVAMGTSLGV-IAPTSVMSF---MEHRRHGTINMKILKDWIFV 106
           VL  A  ++GI   + M +A GT+      P SV+       HRR   I +K       +
Sbjct: 39  VLVLALVIIGI---VAMDIAAGTAFSFWAIPISVVGTIWGYYHRRKPNIPIKFCIAIGML 95

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + +      L     D        A+  LL+ + +L    +   +          + +V 
Sbjct: 96  MALGAFFGRLFGELNDTRL-----ALAELLIQLQVLHSFDVPRRKDL-------GYSIVI 143

Query: 167 GFLSGALGV 175
           G +   LGV
Sbjct: 144 GLI--LLGV 150


>gi|150010089|ref|YP_001304832.1| putative permease [Parabacteroides distasonis ATCC 8503]
 gi|149938513|gb|ABR45210.1| putative permease [Parabacteroides distasonis ATCC 8503]
          Length = 298

 Score = 37.0 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 39/115 (33%), Gaps = 3/115 (2%)

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA---IFCLLMGILMLKRDRLYCERKF 153
              L+  +  L I   + + +  ++ + F+ K      +F + +  ++     +  E   
Sbjct: 174 WDSLRPILGYLLIGVALGAGIYGYMPQDFVLKIAGPDNLFAIPIAAVLGIPLYIRAETAI 233

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAF 208
           P        GM  G +   +  G G+    + +       K  AT   V  L A 
Sbjct: 234 PIGVALMAKGMSIGTVIALVIGGAGMAIPEMTMLASIFRKKLVATIVVVIFLTAV 288


>gi|68445575|dbj|BAE03283.1| hypothetical conserved protein [Candidatus Caldiarchaeum
           subterraneum]
 gi|315427396|dbj|BAJ49004.1| conserved hypothetical protein [Candidatus Caldiarchaeum
           subterraneum]
          Length = 243

 Score = 37.0 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 78/207 (37%), Gaps = 13/207 (6%)

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +L  +   +V +     R      + +  ++        V  L+  +V    L +   + 
Sbjct: 46  ALAGLVFNTVSTSSSILRWRIHFSREMLWFVAGSVPMAFVGGLL--YVPDELLRRVMGV- 102

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA-SI 192
            +L+G   +       ++ +     + + G   G L+G  G+GGG++   L++     + 
Sbjct: 103 AILVGGFTVLTATFQLKKVYLGIPARVLVGCGIGLLAGLTGIGGGVYLAPLLIMLDIANP 162

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
               AT+  +  L +   +L R+        LP      V + A+ +I+  + L +    
Sbjct: 163 KTTAATTTTLILLNSLAGILARL------PRLPTLLPNPVILAAISLIILTAQLGSYTGA 216

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           KL     +K +    ++I+ +     +
Sbjct: 217 KL---FSQKTVRRVIALILISIGLYLS 240


>gi|119899929|ref|YP_935142.1| hypothetical protein azo3640 [Azoarcus sp. BH72]
 gi|119672342|emb|CAL96256.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
          Length = 255

 Score = 37.0 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 57/207 (27%), Gaps = 22/207 (10%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A+   L ++    +         G    + L+  I        + +L    +    +  A
Sbjct: 46  AVAVVLPILIAMDMAGIRAW--RGKAEWRELRVLIPAALAGIGLGALAFGVMSDRMVVGA 103

Query: 130 FAIF-CLLMGILMLKRDRLYC-----ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNL 183
                 +     +L+R +        E +          G  +GF S     GG      
Sbjct: 104 LGAISVVFAADRLLRRTKPAAAAAAGEARPLRRAWAAACGATSGFTSTLSHAGGPPLLI- 162

Query: 184 LMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
            +L  G    +  ATS    A I    L   +                      L++  I
Sbjct: 163 YLLGRGLPRERFVATSVFFFAAINIAKLPFYLSLQLFNPD-------------TLMMSAI 209

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMI 270
            + + P+   L   + K+     F + 
Sbjct: 210 LLPLVPVGVWLGMRLLKRIPERPFYLF 236


>gi|27375815|ref|NP_767344.1| hypothetical protein bll0704 [Bradyrhizobium japonicum USDA 110]
 gi|27348953|dbj|BAC45969.1| bll0704 [Bradyrhizobium japonicum USDA 110]
          Length = 256

 Score = 37.0 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 74/214 (34%), Gaps = 19/214 (8%)

Query: 8   FSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICM 67
            SL  FL KD        +   +F+SGT  G  G G  L+ +P+            S   
Sbjct: 1   MSLTDFLPKDVSFTIAMALCAVAFVSGTARGFSGFGSALIFMPL----------ASSFAA 50

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
              +   L VI   + +  +        + K     +    I   + +  +S ++     
Sbjct: 51  PRLVAALLLVIDFVAALPLLPDAWRKA-DRKATAVIVLGALIGVPIGTYFLSVLEPVTTR 109

Query: 128 KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
              + F   + +L+L   R   E      ++    G ++GF SG    GG     ++  +
Sbjct: 110 WIISSFVAALLLLLLSGWRYRGEDH---AWLSVGIGGLSGFCSGLAQTGG---PPIVGYW 163

Query: 188 YGASIYKATATSAGVSALIA--FPALLVRIYSGW 219
            G  I    A +  +    A  F +++    +G 
Sbjct: 164 LGRPIASIVARANILLFFGASDFFSMVSYATTGL 197


>gi|330908195|gb|EGH36714.1| inner membrane protein [Escherichia coli AA86]
          Length = 291

 Score = 37.0 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 87/259 (33%), Gaps = 28/259 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +C++I   FL   +    G GGGL  +P+++               V M T L VI  
Sbjct: 17  NVVCIVIALMFLYTFVGICAGFGGGLTTMPLVTLMLP-----------VKMATPLSVIVG 65

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T+   +         + +     I    +   V    +S++   F+      F +L    
Sbjct: 66  TATALYATWLSRKETDWRSAMVLIIFSFLGIPVGLYALSYLPDHFMKVGLGGFLILYSFY 125

Query: 141 -MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M        +R +    +  + G +    S              M+ YG  + +    +
Sbjct: 126 SMFIPRLPIYDRSWIAAPIGAVAGALGAAFST---------NGPPMVIYG--MLRNLGPA 174

Query: 200 AGVSALIAFPAL-LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           A    L AF     + +  G   +G+   S+       VL  +P  IL + +   +   I
Sbjct: 175 AFRGTLNAFFTANNIAVIGGLATSGILTVSI----FKLVLFCIPTMILGSLVGQYVHKRI 230

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             K   +   +++  +  +
Sbjct: 231 SVKVFRVMVFLLLIASGSM 249


>gi|323974281|gb|EGB69410.1| hypothetical protein ERFG_04810 [Escherichia coli TW10509]
          Length = 291

 Score = 37.0 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 87/259 (33%), Gaps = 28/259 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +C++I   FL   +    G GGGL  +P+++               V M T L VI  
Sbjct: 17  NVVCIVIALMFLYTFVGICAGFGGGLTTMPLVTLMLP-----------VKMATPLSVIVG 65

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T+   +         + +     I    +   V    +S++   F+      F +L    
Sbjct: 66  TATALYATWLSRKETDWRSAMVLIIFSFLGIPVGLYALSYLPDHFMKVGLGGFLILYSFY 125

Query: 141 -MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M        +R +    +  + G +    S              M+ YG  + +    +
Sbjct: 126 SMFIPRLPIYDRNWIAAPIGAVAGALGAAFST---------NGPPMVIYG--MLRNLGPA 174

Query: 200 AGVSALIAFPAL-LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           A    L AF     + +  G   +G+   S+       VL  +P  IL + +   +   I
Sbjct: 175 AFRGTLNAFFTANNIAVIGGLATSGILTVSI----FKLVLFCIPTMILGSLIGQYVHKRI 230

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             K   +   +++  +  +
Sbjct: 231 SVKVFRVMVFLLLIASGSM 249


>gi|307300121|ref|ZP_07579906.1| protein of unknown function DUF81 [Sinorhizobium meliloti BL225C]
 gi|307316526|ref|ZP_07595969.1| protein of unknown function DUF81 [Sinorhizobium meliloti AK83]
 gi|306897724|gb|EFN28467.1| protein of unknown function DUF81 [Sinorhizobium meliloti AK83]
 gi|306905010|gb|EFN35593.1| protein of unknown function DUF81 [Sinorhizobium meliloti BL225C]
          Length = 235

 Score = 37.0 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 55/189 (29%), Gaps = 17/189 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +    ++   + +S  + G  G+G  L++ PV+      +     +              
Sbjct: 3   LGLFAILSAVTLVSSFIQGALGIGFALIVAPVVGILKPDLLPVTLLL------------L 50

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              +   +  R    ++    K         T     +++ +    L+ A   F ++   
Sbjct: 51  MLPLNFHVAWRERSAVDWSGAKWITLGRFAGTFAGVWLLAALSTQQLDLAVGWFTVIAAA 110

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
             L           P        G+ TG    A G+GG     L     G  +    A  
Sbjct: 111 AALFAPPFE-----PGRPSALGVGLFTGVTETATGIGGPPLALLYQHAQGPILRATVAVC 165

Query: 200 AGVSALIAF 208
             V  +++ 
Sbjct: 166 FFVGEIMSL 174


>gi|227533480|ref|ZP_03963529.1| integral membrane protein [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227188884|gb|EEI68951.1| integral membrane protein [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 257

 Score = 37.0 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 60/177 (33%), Gaps = 19/177 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
                +++A   +G  S L G+   LV  P L       G+       +A  T+   +  
Sbjct: 4   SIFAFLLIAGIGAGLTSTLAGL-ASLVSYPALLAI----GVPPV----IANVTNTAALVF 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T V S +          K L   I ++ + ++  S ++     +   K    F +  G+L
Sbjct: 55  TGVGSAVSSLPELRGRGKFLWRLILLVSLGSIFGSALLLIAPAATFEKVVPFFIIAAGLL 114

Query: 141 MLKRDRLYCERKFPDNYVK----------YIWGMVTGFLSGALGVGGGIFTNLLMLF 187
           +L   RL  +   P    +           I   VTG  +G  G   G+     +  
Sbjct: 115 LLFSGRLPTQEHRPGEPARTLTFGQEAAQTIVIFVTGAYAGYFGAATGVVMLATLTL 171


>gi|89093414|ref|ZP_01166363.1| hypothetical protein MED92_13216 [Oceanospirillum sp. MED92]
 gi|89082393|gb|EAR61616.1| hypothetical protein MED92_13216 [Oceanospirillum sp. MED92]
          Length = 274

 Score = 37.0 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 65/182 (35%), Gaps = 12/182 (6%)

Query: 96  NMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD 155
           +  +LK       I   +  L++  + + ++  A ++  L M I +  +       +   
Sbjct: 78  DRSLLKQLASGAIIGAPLGLLVLIWMPELWIKVATSVLVLYMSINLALQHSKDL--RILS 135

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
                I G V+G ++ A  VGG       +        +  +      A+    +LL+  
Sbjct: 136 PVKNIIMGTVSGAITAAASVGGPPL-VAYLTGCSLRPQQQRSVLIIFFAISTIFSLLLMG 194

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           ++G     +         + AV++++  ++    L  +L +    K      + ++   +
Sbjct: 195 FTGLISTQV---------LYAVVLLILPALAGAYLGNRLFHFRQPKSFRPLVTPMLALLA 245

Query: 276 FV 277
            V
Sbjct: 246 LV 247


>gi|302548650|ref|ZP_07300992.1| LOW QUALITY PROTEIN: DUF81 domain-containing protein [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302466268|gb|EFL29361.1| LOW QUALITY PROTEIN: DUF81 domain-containing protein [Streptomyces
           himastatinicus ATCC 53653]
          Length = 230

 Score = 37.0 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 40/131 (30%), Gaps = 9/131 (6%)

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK----YIWG 163
           P+     +     +  + L K  +   +LM   +L       +      + +       G
Sbjct: 72  PVGAWAGASWAVRMRSATLYKVLSALMVLMAAALLVTHTTTLDTLALPLWAQVPCGVAAG 131

Query: 164 MVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
              G ++  + V GG +    ++L +G     A + S   S      A           +
Sbjct: 132 FGIGVVAAVMDVAGGELLIPTIVLLFGEGFKTAGSLSLLASPPTMLVASPATAVPAASPS 191

Query: 223 GLP----PWSL 229
             P    PWS 
Sbjct: 192 SAPTSDSPWSW 202


>gi|90655480|gb|ABD96320.1| unknown [uncultured marine type-A Synechococcus GOM 3O6]
          Length = 257

 Score = 37.0 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 64/176 (36%), Gaps = 13/176 (7%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG--------TINMKILKDWIFVL 107
           F  + +   +  H A+ TS   I PT++   + H R G         I +      +   
Sbjct: 32  FAPLLLWLDLPPHQALATSSFAIVPTALAGLVSHLRSGSLPVRTGVAIGLSAFGSALLFG 91

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            +  VV+  ++  +        + +    + +   +      E       +    G + G
Sbjct: 92  GLAGVVSGWLLLAMQT----LIYVVLAFAVRVREEEATPGVDEETNGQVGLLAGVGCIAG 147

Query: 168 FLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           + +G LG+GGG+    LM    G  I++A   S       A  A L  ++ G G+ 
Sbjct: 148 WTAGMLGLGGGLVMVPLMNGPLGVPIHRAVRLSTVAVFCSASAASLQFLHEGRGVP 203


>gi|116670672|ref|YP_831605.1| hypothetical protein Arth_2125 [Arthrobacter sp. FB24]
 gi|116610781|gb|ABK03505.1| protein of unknown function DUF81 [Arthrobacter sp. FB24]
          Length = 261

 Score = 36.6 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 96/273 (35%), Gaps = 43/273 (15%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC-MHVAMGTSLGVIAPTS 82
             + +A   +GT++ + G G  LV  PVL      +G+   +  M  AMG     +   +
Sbjct: 7   IFVSIAGLWAGTINAVVGSGT-LVTFPVLI----ALGVTPVVASMSNAMG-----LVFGT 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                 +RR      + L   +    +  +  + ++ H+ +   +   A F +++ +LM+
Sbjct: 57  AAGAFGYRRELKGRGRQLVRLLPASLLGGISGAWLLLHLPEKVFHYV-APFLIVLALLMV 115

Query: 143 ----------KRDRLYCERKFPDN-------YVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
                     +      E    D         + Y+ G+  G+   A G+   +   +L 
Sbjct: 116 VFQPRLQAWVRNREENPEHAVKDKRHAVLLVVLVYLAGVYGGYFVAAQGI---LLVGILG 172

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI 245
           +F   +I  A A    +   +   A +  +   +            +N   VL+I   S 
Sbjct: 173 VFLTGTIQNANAMKNILVLGVNLVAAISYLLFAFDR----------INWLVVLLIAVTSS 222

Query: 246 LITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           +   +  K+   +    L     +++   +  F
Sbjct: 223 VGGLIGAKVGRKLSPTVLRGV-ILVLGLVALGF 254


>gi|163790059|ref|ZP_02184494.1| putative permease [Carnobacterium sp. AT7]
 gi|159874759|gb|EDP68828.1| putative permease [Carnobacterium sp. AT7]
          Length = 249

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 15/157 (9%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           V  I L+I   FL   +  +FG G  ++ +P+L+               +++ TS+ +I 
Sbjct: 3   VTLILLVIGIVFLGSLMRAVFGFGDSIIGMPLLALL------------PISLSTSISLIG 50

Query: 80  PTSVMSFMEHRRHG--TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLM 137
                  +     G   I+  +LK       +   V   ++     + +     IF ++ 
Sbjct: 51  LVGFTVAVLTVLSGWKNIDRPVLKVLSISTLLGIPVGLALVKFAPNAVITYGLGIFLVVY 110

Query: 138 GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALG 174
           GI  L + +L+  +       K IW +  GF +G +G
Sbjct: 111 GIYSLIKPKLFQSKSRL-WLNKPIWSIPFGFAAGMVG 146


>gi|75907695|ref|YP_321991.1| transglutaminase-like protein [Anabaena variabilis ATCC 29413]
 gi|75701420|gb|ABA21096.1| Transglutaminase-like protein [Anabaena variabilis ATCC 29413]
          Length = 753

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 26/151 (17%)

Query: 51  VLSKAFQLMGIDDSICMHVAMGTSLGV-IAPTSVMSF---MEHRRHGTINMKILKDWIFV 106
           VL  A  + GI   + M +A GT+      P SV+       HRR   I +K       +
Sbjct: 11  VLVLALVITGI---VAMDIAAGTTFSFWAIPISVVGTVWGYYHRRKPNIPIKFCIAIGML 67

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVT 166
           + +      L     D        A+  LL+ + +L    +   +          + +V 
Sbjct: 68  MALGAFFGRLFGELNDTRL-----ALAELLIQLQVLHSFDVPRRKDL-------GYSIVI 115

Query: 167 GFLSGALGVGGG-----IFTNLLMLFYGASI 192
           G +   LGV         F  +L+LF   +I
Sbjct: 116 GLI--LLGVAATLSQTLAFAPVLLLFLAIAI 144


>gi|238855667|ref|ZP_04645967.1| transport protein [Lactobacillus jensenii 269-3]
 gi|282933616|ref|ZP_06338985.1| permease [Lactobacillus jensenii 208-1]
 gi|313472559|ref|ZP_07813049.1| transport protein [Lactobacillus jensenii 1153]
 gi|238831733|gb|EEQ24070.1| transport protein [Lactobacillus jensenii 269-3]
 gi|239529999|gb|EEQ69000.1| transport protein [Lactobacillus jensenii 1153]
 gi|281302271|gb|EFA94504.1| permease [Lactobacillus jensenii 208-1]
          Length = 250

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 81/253 (32%), Gaps = 29/253 (11%)

Query: 35  TLSGLFGVGGGLV--MVPVLSKAFQLMGIDD----SICMHVAMGTSLGVIAPTSVMSFME 88
            L  +F +G G++  +V V+S    L+         +    A  T+   +  T + S + 
Sbjct: 5   ILVSIFLIGAGILAGIVSVVSSMASLVSYPALLLAGVAPVYANVTNTAALIFTGLGSAVS 64

Query: 89  HRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL- 147
             +    +      +I ++ I   + S ++    +    K    F  L   L L   +  
Sbjct: 65  SMKELKSSWHKYIKYIILISIGAAIGSFLVVIFPRKIFEKLVPFFVFLSAFLFLMSGKKS 124

Query: 148 ----YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVS 203
                   +F      +  G+ TG+   A G+   +    L+           A    + 
Sbjct: 125 TYQRKANNQFLAKIEMFAAGVYTGYFGAAAGI---LMLIALLSVSNDDFVVVNAVKNVIG 181

Query: 204 ALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYL 263
           +L    AL++ +++              V     + +     +   L   +   +  K +
Sbjct: 182 SLGNLIALIIFLFTSK------------VYWIKAIPLAIGLFIGGFLGQMIIKYLPVKAV 229

Query: 264 TI---GFSMIMFT 273
            I    F++ +  
Sbjct: 230 RIITFIFAIFLAV 242


>gi|134299179|ref|YP_001112675.1| hypothetical protein Dred_1316 [Desulfotomaculum reducens MI-1]
 gi|134051879|gb|ABO49850.1| protein of unknown function DUF81 [Desulfotomaculum reducens MI-1]
          Length = 339

 Score = 36.6 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 7/128 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++  S  SG +SG  GVGGG V VP+L     L  +       +A+GT L  I  T+
Sbjct: 178 LWVVVFLSVTSGFISGFLGVGGGFVRVPMLIYFLGLPTV-------MAVGTDLLAILITN 230

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                 +   G + +      +    I   + S+  +++    +   F+I  +L G  ++
Sbjct: 231 SWGAYIYALAGKVEIMGAIVMLVGAAIGAQIGSVATAYIKGMKIRLYFSITLMLAGTAVI 290

Query: 143 KRDRLYCE 150
            +  L   
Sbjct: 291 FKQLLMPT 298


>gi|148272308|ref|YP_001221869.1| hypothetical protein CMM_1128 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830238|emb|CAN01171.1| conserved membrane protein [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 245

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 51/159 (32%), Gaps = 13/159 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L++ A F+      + G+G  LV+ PVL         D  + +++    S  +I     
Sbjct: 3   ALVLAAVFVGAVAQRVTGLGFALVVSPVLVILLG--PFDGVLIVNLCGALSAAIILAGV- 59

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                      +  +             V  +L+   +    L     I  LL+  L   
Sbjct: 60  --------RRDVEWRRYLFLAIPALAGIVPGALLAYLLPDEALEI--GIGLLLIAALTTS 109

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN 182
                  R      V   +G  +G ++ A G+GG   + 
Sbjct: 110 LVLRRTARAIDGPGVMAGFGFASGVMNAAAGIGGPSLSV 148


>gi|87125267|ref|ZP_01081113.1| putative RND family multidrug efflux transporter [Synechococcus sp.
           RS9917]
 gi|86167036|gb|EAQ68297.1| putative RND family multidrug efflux transporter [Synechococcus sp.
           RS9917]
          Length = 1134

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 44/132 (33%), Gaps = 10/132 (7%)

Query: 100 LKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVK 159
              ++ VL       ++          + A + F  L    ML    L  E K P     
Sbjct: 456 FAVFLPVLFFPGATGTIYKQFAATVIFSIAISTFNALTFSPMLSALLLARESKDPGRRAY 515

Query: 160 YIWGMVTGFLSGALGVGGGIFTNLLML----FYGASIYKATATSAGVSALIAFPALLVRI 215
            I G + GF  G L VGGG    L+       +G  + +       +    A P  L   
Sbjct: 516 AIAGTLIGFAYGLLVVGGGAALVLVPTVVAALFGLVLAR------LIDRPCALPFTLGGA 569

Query: 216 YSGWGLNGLPPW 227
            SG  L G+  W
Sbjct: 570 ISGLALVGVSRW 581


>gi|325068123|ref|ZP_08126796.1| hypothetical protein AoriK_09891 [Actinomyces oris K20]
          Length = 257

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 46/143 (32%), Gaps = 13/143 (9%)

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR----- 146
            G  + ++L+  +  +       +L +         +      L++  + L + R     
Sbjct: 67  RGDADFRMLRRLVPAVLAGVGAGALFLHLASNDSTRRLIGAILLILVAVTLYQRRSATRN 126

Query: 147 -----LYCERKFP--DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
                    R  P      + ++G + GF +  +   GG  T++  L     +     T+
Sbjct: 127 RSDDAPEVARPAPAGSRLARLVYGSLAGF-TTMVANAGGPVTSMYFLACRYPVKAFLGTT 185

Query: 200 AGVSALIAFPALLVRIYSGWGLN 222
           A    L+    L   + +G    
Sbjct: 186 AWFFFLVNLVKLPFSVSAGLVNP 208


>gi|226953369|ref|ZP_03823833.1| thiol:disulfide interchange protein precursor [Acinetobacter sp.
           ATCC 27244]
 gi|226835907|gb|EEH68290.1| thiol:disulfide interchange protein precursor [Acinetobacter sp.
           ATCC 27244]
          Length = 617

 Score = 36.6 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 61/220 (27%), Gaps = 60/220 (27%)

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD---KSFLN-----KAFAIFC 134
           + S +     G     I   ++  + +   +  L+ S      + +L       AF++  
Sbjct: 243 LTSLIVRENKGVKAWAIALTFVVSMAMIYALLGLIASAAGLNFQRWLQQPATLIAFSLLF 302

Query: 135 LLMGILMLKRDRLYCERKF---------PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM 185
           ++  + +     L   +K+                +   V G +S              M
Sbjct: 303 VVFALNLFGLFELKMPQKWVNRLDHLQASQKGGTLVGASVIGMISAL-------LVGPCM 355

Query: 186 LFYGASIYKATATSAGVSALIAFPALLVRIYSGWGL--NGLPPWSLGFVNIGAVLIILPI 243
                                    +L+ I          L  ++LGF        +   
Sbjct: 356 TA-------------------PLAGVLLFISQTQNQWQGALLLFTLGF-------GMGIP 389

Query: 244 SILITPLATKLSYMIGKK-----YLTIGFSMIMFTTSFVF 278
            +L T L  ++   + K       + + F+ +M   S  F
Sbjct: 390 LLLATVLGARV---LPKAGEWMHQIKVIFAFLMLALSIYF 426


>gi|221482011|gb|EEE20377.1| conserved hypothetical protein [Toxoplasma gondii GT1]
          Length = 665

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 40/97 (41%), Gaps = 5/97 (5%)

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             +++L  G ++Y+ATATS  +    +     + ++        P      +++  VL++
Sbjct: 147 VPIMILVMGFTVYEATATSQALMFGGSLAGTSLNLFRRHPYADRPA-----IDLDLVLLM 201

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+ I        ++       +     +++F T++ 
Sbjct: 202 GPMQIAGATFGLVINRCWPVYLIMALLVVLLFATAYK 238


>gi|329945818|ref|ZP_08293505.1| hypothetical protein HMPREF9056_01394 [Actinomyces sp. oral taxon
           170 str. F0386]
 gi|328528266|gb|EGF55244.1| hypothetical protein HMPREF9056_01394 [Actinomyces sp. oral taxon
           170 str. F0386]
          Length = 257

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 83/264 (31%), Gaps = 32/264 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L++V + L G        G   + V + +          +I + +  G  L V      
Sbjct: 11  ILLMVVAALCGIAKTTL-PGAATIAVALSTAVLPAKESTGAILLMLMTGDLLAV------ 63

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +RR    + ++L+  +  +       +L +         +   +  L++  + L 
Sbjct: 64  ---WSYRR--DADFRMLRRLVPAVLAGVGAGALFLHLASNDSTRRLIGVILLILVGVTLL 118

Query: 144 RDRLY--------CERKFPDNYVKYIWGMVTGFLSG---ALGVGGGIFTNLLMLFYGASI 192
           + R           E   P      +  +V G L+G    +   GG  T++  L     +
Sbjct: 119 QRRSASRNGPDDGSETAPPTPASNRLARLVYGSLAGFTTMVANAGGPVTSMYFLACRYPV 178

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
                T+A    L+    L   + +G         +         ++  P+ I+      
Sbjct: 179 KAFLGTTAWFFFLVNLVKLPFSVSAGLVNATTLSLT---------VMAAPVVIVSALTGR 229

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSF 276
           +L+  + ++        +   ++ 
Sbjct: 230 RLAERMDQRVFEPIIVALTIVSAI 253


>gi|56695265|ref|YP_165613.1| hypothetical protein SPO0350 [Ruegeria pomeroyi DSS-3]
 gi|56677002|gb|AAV93668.1| membrane protein, putative [Ruegeria pomeroyi DSS-3]
          Length = 251

 Score = 36.6 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/182 (10%), Positives = 47/182 (25%), Gaps = 10/182 (5%)

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF-CLLMGILMLKRDRLYCERKFPD 155
               +  I        + +L+    D   L           +   ML+      E     
Sbjct: 72  WPDARLLILGGLPGVALGALLYRATDADLLRLLIGGISLAFVAWQMLRGRGWMREFASRL 131

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
                +        +  +   GG    + +L       +  AT+      +     +   
Sbjct: 132 PPAAGLLAGAVAGFTSFVSHAGGPPAAVYLLSQRLGKTEFQATTVLTFWALNIAKFVPYA 191

Query: 216 YSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           + G                 A L++ P ++L   L  +  +M+ ++        ++  T 
Sbjct: 192 WLGMFTLDTAR---------AGLLLAPFALLGAWLGVRAHHMVPERAFFALAHAMLTLTG 242

Query: 276 FV 277
             
Sbjct: 243 LK 244


>gi|300780081|ref|ZP_07089937.1| membrane protein [Corynebacterium genitalium ATCC 33030]
 gi|300534191|gb|EFK55250.1| membrane protein [Corynebacterium genitalium ATCC 33030]
          Length = 252

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 74/217 (34%), Gaps = 26/217 (11%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+++P L     + G   S    +A    +  ++ T   +    RR G    + +  
Sbjct: 25  GGGLILIPAL-----MAGTSLSPAAVLATNK-IASVSGTGSAAVTLVRRVGA--PRHIWG 76

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP-----DNY 157
           +  +  + +   +   S +D S L        L +G+ +            P        
Sbjct: 77  YALIAGLLSGCGAAFASLIDASILRPLIITLLLTVGVFVAFNPSFGTASANPILTRRRVV 136

Query: 158 VKYIWGMVTGFLSGALGVGGGIFTNL-LMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           +        GF  G  G G G+F  +     +     ++ A +  V+      AL+V I 
Sbjct: 137 LGACLVAAIGFYDGIFGPGTGMFLIMGFTALFAQDFLRSAAMAKVVNTATNVGALVVFI- 195

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATK 253
                      S GFV+    L +   +I+   +  +
Sbjct: 196 -----------SAGFVDWPLALALAAANIVGAQIGAR 221


>gi|221505087|gb|EEE30741.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 665

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 40/97 (41%), Gaps = 5/97 (5%)

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             +++L  G ++Y+ATATS  +    +     + ++        P      +++  VL++
Sbjct: 147 VPIMILVMGFTVYEATATSQALMFGGSLAGTSLNLFRRHPYADRPA-----IDLDLVLLM 201

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+ I        ++       +     +++F T++ 
Sbjct: 202 GPMQIAGATFGLVINRCWPVYLIMALLVVLLFATAYK 238


>gi|218678424|ref|ZP_03526321.1| hypothetical protein RetlC8_05934 [Rhizobium etli CIAT 894]
          Length = 151

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 46/149 (30%), Gaps = 12/149 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           + +    + A  L G   G  G    L+ +P L+           +    A    L ++ 
Sbjct: 13  LSFYYAAVPAVLLVGLAKGGMGDALSLIGLPFLALV---------VSPVEAAAILLPILV 63

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              ++S +  R+HG  +   LK  +        +     + V  + L        +L  +
Sbjct: 64  FMDMISLVIWRKHG--DWATLKIMLPGAVFGIALGWATSALVPGNVLRIVIGAVTILFCL 121

Query: 140 -LMLKRDRLYCERKFPDNYVKYIWGMVTG 167
                      ++  P    + +   + G
Sbjct: 122 RYFWNNYGPGADKIVPPRGQRPVAAGLWG 150


>gi|237836929|ref|XP_002367762.1| hypothetical protein TGME49_005300 [Toxoplasma gondii ME49]
 gi|211965426|gb|EEB00622.1| hypothetical protein TGME49_005300 [Toxoplasma gondii ME49]
          Length = 665

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 40/97 (41%), Gaps = 5/97 (5%)

Query: 181 TNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLII 240
             +++L  G ++Y+ATATS  +    +     + ++        P      +++  VL++
Sbjct: 147 VPIMILVMGFTVYEATATSQALMFGGSLAGTSLNLFRRHPYADRPA-----IDLDLVLLM 201

Query: 241 LPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFV 277
            P+ I        ++       +     +++F T++ 
Sbjct: 202 GPMQIAGATFGLVINRCWPVYLIMALLVVLLFATAYK 238


>gi|82799268|gb|ABB92195.1| hypothetical protein [uncultured marine type-A Synechococcus 4O4]
          Length = 257

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 64/176 (36%), Gaps = 13/176 (7%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG--------TINMKILKDWIFVL 107
           F  + +   +  H A+ TS   I PT++   + H R G         I +      +   
Sbjct: 32  FAPLLLWLDLPPHQALATSSFAIVPTALAGLVSHLRSGSLPVRTGVAIGLSAFGSALLFG 91

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            +  VV+  ++  +        + +    + +   +      E       +    G + G
Sbjct: 92  GLAGVVSGWLLLAMQT----LIYVVLAFAVRVREEEATPGVDEETNGQVGLLAGVGCIAG 147

Query: 168 FLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           + +G LG+GGG+    LM    G  I++A   S       A  A L  ++ G G+ 
Sbjct: 148 WTAGMLGLGGGLVMVPLMNGPMGVPIHRAVRLSTVAVFCSASAASLQFLHEGRGVP 203


>gi|154244604|ref|YP_001415562.1| hypothetical protein Xaut_0652 [Xanthobacter autotrophicus Py2]
 gi|154158689|gb|ABS65905.1| protein of unknown function DUF81 [Xanthobacter autotrophicus Py2]
          Length = 250

 Score = 36.6 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 68/208 (32%), Gaps = 14/208 (6%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A    L V+    V+S   + R  ++    L+  +    +  V+  L+ + V    +   
Sbjct: 45  AAAILLPVLIVQDVVSLYAYWRRWSV--AELRRTLPAAVVGIVIGYLLAASVSDQAVALG 102

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
             +  +          R              +W  V GF+S     GG      L+    
Sbjct: 103 IGLLSIAEAARHAVSKRRKRPAGEAGPGSAALWSAVAGFVSMIANAGGPPMMIYLLRRPR 162

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
            +  +  AT+A   +++ +  +   +  G              N+    ++LP++I+ T 
Sbjct: 163 LAPEQFAATTAAFFSVVNWVKVPFFLALGQITGA---------NLATSAVLLPVAIIATF 213

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              +L   +        F +I    + V
Sbjct: 214 AGVQLVRRVPAD---RFFGIIYLILAAV 238


>gi|15605710|ref|NP_213087.1| hypothetical protein aq_127 [Aquifex aeolicus VF5]
 gi|2982879|gb|AAC06499.1| putative protein [Aquifex aeolicus VF5]
          Length = 272

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 10/138 (7%)

Query: 41  GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKIL 100
           G G G+ +V +LS  ++      ++ +   +   LG+I+    +      +    N KIL
Sbjct: 19  GFGAGIFIVGILSLFYE----PKTVIVSSTVVNLLGIISMLLFLG-----KITRPNFKIL 69

Query: 101 KDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY 160
              I        V++ ++  +D+  L      F L +GI          + +   +    
Sbjct: 70  FPLIAGSVAGIGVSAKLLMEIDREVLKALIGGFVLFLGIYDFLVQTNSLKFRLKASPFVG 129

Query: 161 IW-GMVTGFLSGALGVGG 177
           ++ G ++G  +G +G+GG
Sbjct: 130 VFTGFLSGIFAGLIGMGG 147


>gi|13541508|ref|NP_111196.1| permease [Thermoplasma volcanium GSS1]
 gi|14324892|dbj|BAB59818.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 250

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 54/150 (36%), Gaps = 11/150 (7%)

Query: 24  CLIIVASFLSGTLSGLF---GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
              ++   ++  LS LF   GVG    ++P+             I   +A    L +   
Sbjct: 3   LFFLIIFIITWILSALFATAGVGAANTLIPIYY--------SMGIPFSIAAAAGLLLNVF 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +   + + + +   +  K+   ++    I   + +L+  H  +  L   F +F       
Sbjct: 55  SLSSATVNNGKRDRVLWKLGIIFLAPAVIMAPMGALVGIHTPRKVLLWMFVMFLGYTLYN 114

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           +++        KF  N   Y  G++ G ++
Sbjct: 115 LIRGKAKGNSDKFSVNAKGYALGVLVGAIA 144


>gi|16082130|ref|NP_394567.1| hypothetical protein Ta1108 [Thermoplasma acidophilum DSM 1728]
 gi|10640421|emb|CAC12235.1| conserved hypothetical membrane protein [Thermoplasma acidophilum]
          Length = 257

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 54/156 (34%), Gaps = 4/156 (2%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            I   +A    L +   +   +   + +H  I  KI   ++        V +++  H  +
Sbjct: 41  GIPFSIAAAAGLLLNVFSLSSATANNAKHSFILWKIGVIFLIPAVAMAPVGAMVGVHTPR 100

Query: 124 SFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGI---- 179
            +L   F +F       ++   +   +          I G+  G L+G LG   G+    
Sbjct: 101 KYLLIIFVVFLSYTLFNLISGRKKGKKDAVLTGISGAITGIFIGALAGFLGGLLGVGGGM 160

Query: 180 FTNLLMLFYGASIYKATATSAGVSALIAFPALLVRI 215
               ++ F  +   K   TSA ++   +    L  +
Sbjct: 161 IILPVLTFMESDYKKIAGTSAFIALFSSASGFLSYL 196


>gi|330719827|gb|EGG98324.1| Protein of unknown function DUF81 [gamma proteobacterium IMCC2047]
          Length = 216

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 76/221 (34%), Gaps = 26/221 (11%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           VA  T+   +    V+     +RH  +++      + +     +V +L  S++  ++L  
Sbjct: 9   VANATNRLGVGLQCVVGVRGFKRHDKLDLSDAIPIVGMTLGGGLVGALAASYLPNTYLKP 68

Query: 129 AFAIFCLLMGILMLKRDRL----------YCERKFPDNYVKYIWGMVTGFLSGALGVGGG 178
                 + M +++L +  +              +    ++ ++ G+  GF+   +G    
Sbjct: 69  VLLGAMVTMALIILIKPSVVMAEEGEPIQRLSNRPQAKWILFVAGIYGGFVQAGVGF--- 125

Query: 179 IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVL 238
           +    +       + +  A     +    F AL V I  G             V     L
Sbjct: 126 MLIAAIAGSLRYDLVRTNALKMLCTIGFTFVALAVFIVRGQ------------VEWLPGL 173

Query: 239 IILPISILITPLATKLSYMIGKKYLT-IGFSMIMFTTSFVF 278
           ++   +++    A K++  + +K L    F M +F      
Sbjct: 174 VLACGTMIGAHYAVKMAIKVSQKTLKWFLFVMTLFACGAAM 214


>gi|323964226|gb|EGB59709.1| hypothetical protein ERJG_04319 [Escherichia coli M863]
 gi|327250508|gb|EGE62216.1| hypothetical protein ECSTEC7V_4590 [Escherichia coli STEC_7v]
          Length = 291

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 87/259 (33%), Gaps = 28/259 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +C++I   FL   +    G GGGL  +P+++               V M T L VI  
Sbjct: 17  NVVCIVIALMFLYTFVGICAGFGGGLTTMPLVTLMLP-----------VKMATPLSVIVG 65

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T+   +         + +     I    +   V    +S++   F+      F +L    
Sbjct: 66  TATALYATWLSRKETDWRSAMVLIIFSFLGIPVGLYALSYLPDHFMKVGLGGFLILYSFY 125

Query: 141 -MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M        +R +    +  + G +    S              M+ YG  + +    +
Sbjct: 126 SMFIPRLPIYDRNWIAAPIGAVAGALGAAFST---------NGPPMVIYG--MLRNLGPA 174

Query: 200 AGVSALIAFPAL-LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           A    L AF     + +  G   +G+   S+       VL  +P  IL + +   +   I
Sbjct: 175 AFRGTLNAFFTANNIAVIGGLATSGILTVSI----FKLVLFCIPTMILGSLVGQYVHKRI 230

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             K   +   +++  +  +
Sbjct: 231 SVKVFRVMVFLLLIASGSM 249


>gi|331655564|ref|ZP_08356556.1| hypothetical membrane protein [Escherichia coli M718]
 gi|309704304|emb|CBJ03653.1| putative transmembrane protein [Escherichia coli ETEC H10407]
 gi|323934366|gb|EGB30779.1| hypothetical protein ERCG_04217 [Escherichia coli E1520]
 gi|331046665|gb|EGI18750.1| hypothetical membrane protein [Escherichia coli M718]
          Length = 291

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 87/259 (33%), Gaps = 28/259 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +C++I   FL   +    G GGGL  +P+++               V M T L VI  
Sbjct: 17  NVVCIVIALMFLYTFVGICAGFGGGLTTMPLVTLMLP-----------VKMATPLSVIVG 65

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T+   +         + +     I    +   V    +S++   F+      F +L    
Sbjct: 66  TATALYATWLSRKETDWRSAMVLIIFSFLGIPVGLYALSYLPDHFMKVGLGGFLILYSFY 125

Query: 141 -MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M        +R +    +  + G +    S              M+ YG  + +    +
Sbjct: 126 SMFIPRLPIYDRNWIAAPIGAVAGALGAAFST---------NGPPMVIYG--MLRNLGPA 174

Query: 200 AGVSALIAFPAL-LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           A    L AF     + +  G   +G+   S+       VL  +P  IL + +   +   I
Sbjct: 175 AFRGTLNAFFTANNIAVIGGLATSGILTVSI----FKLVLFCIPTMILGSLVGQYVHKRI 230

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             K   +   +++  +  +
Sbjct: 231 SVKVFRVMVFLLLIASGSM 249


>gi|301118272|ref|XP_002906864.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262108213|gb|EEY66265.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 439

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 6/126 (4%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I+ + L   +S    +GGG V+  V     +L        + +A  T  G       
Sbjct: 63  LLGILLAALVVLISSGAKIGGGAVLDAVYILVLKL---GPDEAIPLASITVFGGAVCDFF 119

Query: 84  MSFMEHRRHGT---INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           ++  +   +     IN   +     +L +     + MIS      L  A  ++ + +G  
Sbjct: 120 LNLWKKPINSNFPLINWDFMLIMQPMLLMGAAFGASMISWFSTWLLTIALIVYLVYVGKK 179

Query: 141 MLKRDR 146
             K+ R
Sbjct: 180 AFKKAR 185


>gi|89072261|ref|ZP_01158840.1| putative membrane protein [Photobacterium sp. SKA34]
 gi|89051793|gb|EAR57245.1| putative membrane protein [Photobacterium sp. SKA34]
          Length = 223

 Score = 36.6 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 30/245 (12%), Positives = 87/245 (35%), Gaps = 31/245 (12%)

Query: 36  LSGLFGVGGGLVMVPVL-SKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT 94
           ++ + G GGG++++  L S     + I     + +A  +S  + +               
Sbjct: 2   IAAVVGFGGGMLLIAFLPSFLAPSLIIPTHGLVQLASNSSRMLFSIN------------K 49

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL-MLKRDRLYCERKF 153
           +   +L  ++    + ++V    +SH+   ++     ++ LL        +     E  +
Sbjct: 50  VRWGLLPRFLIGSVLGSLVIGYGLSHIPMDYVPLGIGLYILLNLWNPRFSKAVSKYENYY 109

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
              +++   G+V G          G     ++        +  ATS+   ++     + V
Sbjct: 110 LIGFLQTGLGLVIGAP--------GPLALTVLTKQLKCKDEIIATSSLFMSISHLAKIPV 161

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFT 273
            +     L           ++ A+++++  +++ + + TKL +      L     +++  
Sbjct: 162 YLVLSSELLT---------DVPAIVVMVIGAVMGSYIGTKLRFKANNAILVKIIKILLTL 212

Query: 274 TSFVF 278
            +   
Sbjct: 213 LALRM 217


>gi|81427762|ref|YP_394761.1| integral membrane protein [Lactobacillus sakei subsp. sakei 23K]
 gi|78609403|emb|CAI54449.1| Hypothetical integral membrane protein [Lactobacillus sakei subsp.
           sakei 23K]
          Length = 248

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 10/162 (6%)

Query: 26  IIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMS 85
           +I+    +G +S   G    LV  P L            +    A  T+   +  T V +
Sbjct: 10  LILIGVAAGIVST-VGGLASLVSYPALLAL--------GLPPVTANVTNTAGLIFTGVGA 60

Query: 86  FMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD 145
            +  R+      + L   + +  I  +V +L++  +      K    F L  GIL+L   
Sbjct: 61  SLASRKELKHQKRELITLLPLTLIGCIVGALLLFKIPAETFQKIVPFFILSAGILILLPR 120

Query: 146 RLYCERKFPDNYVKYIWG-MVTGFLSGALGVGGGIFTNLLML 186
            L   +           G  + G  SG  G   G+    L+ 
Sbjct: 121 HLQVGQPAKWQVSLAWLGVFLVGIYSGYFGAASGVLMLSLLS 162



 Score = 36.2 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 42/120 (35%), Gaps = 7/120 (5%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L  +  FL G  SG FG   G++M         L+ +           T    +   +
Sbjct: 132 VSLAWLGVFLVGIYSGYFGAASGVLM-------LSLLSVISQAPFQEYNATKNLTMGLAN 184

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
            ++ + +    TIN  ++        I  ++  +++  + +        I  L + + + 
Sbjct: 185 CIATLVYALQTTINWGLVLPLGIGFLIGGLIGPIIVRLLPERLTKIGIGIAALGLAVSLF 244


>gi|290955791|ref|YP_003486973.1| integral membrane protein [Streptomyces scabiei 87.22]
 gi|260645317|emb|CBG68403.1| putative integral membrane protein [Streptomyces scabiei 87.22]
          Length = 257

 Score = 36.6 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 50/155 (32%), Gaps = 8/155 (5%)

Query: 61  IDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISH 120
               +    + G  L ++    V++ + +RRH       L      +    V+ +L +  
Sbjct: 42  FAAVLPARASTGVLLPILIVGDVLAVLTYRRHAH--WPTLWKLFPAVGAGVVLGTLFLIR 99

Query: 121 VDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGM------VTGFLSGALG 174
            D   +  +     LLM  + + R R       PD        +      V G  +  + 
Sbjct: 100 ADDRIVRTSIGAILLLMAAVTVWRRRTVDHDDEPDAVTTRAGRVKARSYGVLGGFTTMVA 159

Query: 175 VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
             GG   ++ +L  G        TSA    ++   
Sbjct: 160 NAGGPVMSMYLLSAGFRKLGFLGTSAFFFLIVNVS 194


>gi|331084383|ref|ZP_08333487.1| hypothetical protein HMPREF0992_02411 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330401647|gb|EGG81228.1| hypothetical protein HMPREF0992_02411 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 262

 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 42/134 (31%), Gaps = 11/134 (8%)

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVD---------KSFLNKAFAIFCLLMGILMLKR 144
            I  K          +  ++   M S V           +       +  +   +  L +
Sbjct: 69  NIEQKTGLPLALGAAVGGLLGKWMFSFVSSLSPDKNKVGAVQAACLMLVTVGTLVYTLYK 128

Query: 145 DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFT-NLLMLFYGASIYKATATSAGVS 203
           +R+       +       G+  G LS  LG+GGG     +L  F+  +   A   S  + 
Sbjct: 129 ERIK-TYHVTNLMACVAIGIFLGILSSFLGIGGGPINLVVLFFFFSMTTKIAAENSLYII 187

Query: 204 ALIAFPALLVRIYS 217
                 +LL  I +
Sbjct: 188 FFSQIASLLSSIVT 201


>gi|319764567|ref|YP_004128504.1| hypothetical protein Alide_3909 [Alicycliphilus denitrificans BC]
 gi|317119128|gb|ADV01617.1| protein of unknown function DUF81 [Alicycliphilus denitrificans BC]
          Length = 248

 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 54/160 (33%), Gaps = 10/160 (6%)

Query: 19  VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVI 78
           ++ +  +++ A  L+G L G  G+G G+++VPVL+   +  G++ +  +  A        
Sbjct: 3   LLAHAWILLPAVLLAGALIGATGIG-GVLLVPVLT---RFGGVEPAQAIAAASLAFALPA 58

Query: 79  APTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG 138
                   +   R      +     +       V  +L++  +    L        L  G
Sbjct: 59  LV-----ALRPLRRDPALARRTAPLLLGALTGAVGGALLVQALPARALLAGVTALVLFAG 113

Query: 139 ILMLKRDRLYCERKF-PDNYVKYIWGMVTGFLSGALGVGG 177
              L       E             G++ G  S   G GG
Sbjct: 114 WRGLAARGPGAEAAPQLPRPALAGLGLLVGVGSALTGTGG 153


>gi|300694281|ref|YP_003750254.1| integral membrane transmembrane protein [Ralstonia solanacearum
           PSI07]
 gi|299076318|emb|CBJ35631.1| putative integral membrane transmembrane protein [Ralstonia
           solanacearum PSI07]
          Length = 252

 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 74/251 (29%), Gaps = 26/251 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+  A  L+G ++ + G GG  V +P L  A         +    A  +S   + P +  
Sbjct: 7   LLFGAGLLAGAMNAMAG-GGSFVTLPALMFA--------GVPSVSANASSTVALLPGAAT 57

Query: 85  SFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           S   +RR +       ++  + V     +  +L++        +       L+  +    
Sbjct: 58  SAWAYRRDYRGFEQVSMRAMVAVSLTGGLAGALLLMSTPSRAFDFIVPWLLLVGSLAFTF 117

Query: 144 RDR---LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT-ATS 199
             +       R         +         G  G   GI    +    G    +A  A+ 
Sbjct: 118 GRQAGAWLRRRMRIGRPALLLAQGTLAVYGGYFGGAVGIMMMAVWSLLGHDDLRALNASR 177

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +       A+L    +              V     L++L  + L   L   ++  + 
Sbjct: 178 TLLVGATNVVAVLCFAAAKL------------VWWPQTLVMLVAAALGGYLGAHVAQRLP 225

Query: 260 KKYLTIGFSMI 270
              + +  S  
Sbjct: 226 VPVVRMLISTF 236


>gi|254478531|ref|ZP_05091906.1| conserved domain protein, putative [Carboxydibrachium pacificum DSM
           12653]
 gi|214035539|gb|EEB76238.1| conserved domain protein, putative [Carboxydibrachium pacificum DSM
           12653]
          Length = 251

 Score = 36.6 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 87/263 (33%), Gaps = 29/263 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +I+VAS L+G  + + G GG L+  P L     +  +  +I   VA+ T        SV
Sbjct: 5   VIILVASILAGATNAIAG-GGTLITFPALVWV-GINPLSANITNTVALWTG-------SV 55

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                 +       ++L+       +  ++ + ++        +       L   +++  
Sbjct: 56  TGAWAFKERLYQTKELLRFLTLPSLLGGILGAYLLMITPHKVFDFIVPFLVLFATVVLAL 115

Query: 144 RDRLYC-------ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA-SIYKA 195
            DR+          +K       +I   +T    G    G GI     +   G   I+ A
Sbjct: 116 NDRINKFNLIDDRNKKNKSLVAVFILQFLTSLYGGYFAAGIGILMLATLGIAGITDIHTA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
                 +S  I   + LV I+SG             V      I++    L   L   +S
Sbjct: 176 NGIKNVLSLFINITSGLVLIFSGK------------VVWVYAFILMLGFALGGYLGAMIS 223

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
                + +     +  F  + +F
Sbjct: 224 QRFDGRKVKNFVVLWGFILAVMF 246


>gi|254502042|ref|ZP_05114193.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11]
 gi|222438113|gb|EEE44792.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11]
          Length = 253

 Score = 36.6 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 51/160 (31%), Gaps = 11/160 (6%)

Query: 11  MVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVA 70
           M  +        +  +    F+SG + G  G G G++ +P+             +    A
Sbjct: 1   MFDILASFSPQLLVFLAAILFVSGYIRGFAGFGAGMIFMPI---------AASVMLPSTA 51

Query: 71  MGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAF 130
             T L + +  S+      R     +   +   +F   +     + +++ +D   L    
Sbjct: 52  AATFLFIDSIVSLPLVR--RALHLCDWSTVLPAVFGSVLFVHAGAWLLATMDVLTLRWII 109

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLS 170
           +        L++   R       P ++       V G +S
Sbjct: 110 SAVVAATLALVVSGWRYQKHPTPPVSFGVGAVSGVLGGVS 149


>gi|261251772|ref|ZP_05944346.1| hypothetical protein VIA_001793 [Vibrio orientalis CIP 102891]
 gi|260938645|gb|EEX94633.1| hypothetical protein VIA_001793 [Vibrio orientalis CIP 102891]
          Length = 242

 Score = 36.6 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 53/164 (32%), Gaps = 17/164 (10%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  + +     +  +  FL   +    G G  +V  P+L                     
Sbjct: 1   MLAEWITPEALIAALLIFLGSFVQTAIGFGLAIVAAPLLFLISPDYVPAPICL------- 53

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
              V    S+++ ++H    ++ +  LK  +      ++   +++  V    L       
Sbjct: 54  ---VALFISILNALKH--RDSVEIGGLKMALIGRVPGSIAGGVLLVMVSTDLLALWLGAL 108

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
            L   I+ L   R+      P      I G  +GF   + G+GG
Sbjct: 109 VLFAVIVSLLPFRIE-----PTPARMTIAGFFSGFFGTSSGIGG 147


>gi|242278615|ref|YP_002990744.1| hypothetical protein Desal_1142 [Desulfovibrio salexigens DSM 2638]
 gi|242121509|gb|ACS79205.1| protein of unknown function DUF81 [Desulfovibrio salexigens DSM
           2638]
          Length = 489

 Score = 36.6 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 21/45 (46%)

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATAT 198
           P  +     G+VTG LS  +G GGG+     ++  G S   A  +
Sbjct: 51  PGFFQCTAIGLVTGMLSAVIGAGGGLLVVPALMTAGVSGIYAVGS 95


>gi|218692163|ref|YP_002400375.1| putative permease [Escherichia coli ED1a]
 gi|293417340|ref|ZP_06659964.1| hypothetical protein ECDG_04407 [Escherichia coli B185]
 gi|331649722|ref|ZP_08350802.1| hypothetical membrane protein [Escherichia coli M605]
 gi|331660428|ref|ZP_08361362.1| hypothetical membrane protein [Escherichia coli TA206]
 gi|218429727|emb|CAR10688.2| putative permease [Escherichia coli ED1a]
 gi|291430860|gb|EFF03856.1| hypothetical protein ECDG_04407 [Escherichia coli B185]
 gi|315300230|gb|EFU59467.1| conserved hypothetical protein [Escherichia coli MS 16-3]
 gi|331041355|gb|EGI13505.1| hypothetical membrane protein [Escherichia coli M605]
 gi|331052377|gb|EGI24414.1| hypothetical membrane protein [Escherichia coli TA206]
          Length = 291

 Score = 36.6 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 87/259 (33%), Gaps = 28/259 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +C++I   FL   +    G GGGL  +P+++               V M T L VI  
Sbjct: 17  NVVCIVIALMFLYTFVGICAGFGGGLTTMPLVTLMLP-----------VKMATPLSVIVG 65

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T+   +         + +     I    +   V    +S++   F+      F +L    
Sbjct: 66  TATALYATWLSRKETDWRSAMVLIIFSFLGIPVGLYALSYLPDHFMKVGLGGFLILYSFY 125

Query: 141 -MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M        +R +    +  + G +    S              M+ YG  + +    +
Sbjct: 126 SMFIPRLPIYDRSWIAAPIGAVAGALGAAFST---------NGPPMVIYG--MLRNLGPA 174

Query: 200 AGVSALIAFPAL-LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           A    L AF     + +  G   +G+   S+       VL  +P  IL + +   +   I
Sbjct: 175 AFRGTLNAFFTANNIAVIGGLATSGILTVSI----FKLVLFCIPTMILGSLVGQYVHKRI 230

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             K   +   +++  +  +
Sbjct: 231 SVKVFRVMVFLLLIASGSM 249


>gi|294651927|ref|ZP_06729216.1| thiol:disulfide interchange protein [Acinetobacter haemolyticus
           ATCC 19194]
 gi|292822159|gb|EFF81073.1| thiol:disulfide interchange protein [Acinetobacter haemolyticus
           ATCC 19194]
          Length = 617

 Score = 36.6 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 66/219 (30%), Gaps = 58/219 (26%)

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVD---KSFLN-----KAFAIFC 134
           + S +     G     I   ++  + +   +  L+ S      + +L       AF++  
Sbjct: 243 LTSLIVRENKGVKAWAIALTFVVSMAMIYALLGLIASAAGLNFQRWLQQPATLIAFSLLF 302

Query: 135 LLMGILMLKRDRLYCERKFPDNYVKYI--------WGMVTGFLSGALGVGGGIFTNLLML 186
           ++  + +     L    K P  +V  +         G + G  +  +G+   +     M 
Sbjct: 303 VVFALNLFGLFEL----KMPQKWVNRLDHLQASQKGGTLVG--ASVMGMISALLVGPCMT 356

Query: 187 FYGASIYKATATSAGVSALIAFPALLVRIYSGWGL--NGLPPWSLGFVNIGAVLIILPIS 244
                                   +L+ I          L  ++LGF        +    
Sbjct: 357 A-------------------PLAGVLLFISQTQNQWQGALLLFTLGF-------GMGIPL 390

Query: 245 ILITPLATKLSYMIGKK-----YLTIGFSMIMFTTSFVF 278
           +L T L  ++   + K       + + F+ +M   S  F
Sbjct: 391 LLATVLGARV---LPKAGEWMHQIKVIFAFLMLALSLYF 426


>gi|281180939|dbj|BAI57269.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 291

 Score = 36.6 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 87/259 (33%), Gaps = 28/259 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +C++I   FL   +    G GGGL  +P+++               V M T L VI  
Sbjct: 17  NVVCIVIALMFLYTFVGICAGFGGGLTTMPLVTLMLP-----------VKMATPLSVIVG 65

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T+   +         + +     I    +   V    +S++   F+      F +L    
Sbjct: 66  TATALYATWLSRKETDWRSAMVLIIFSFLGIPVGLYALSYLPDHFMKVGLGGFLILYSFY 125

Query: 141 -MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M        +R +    +  + G +    S              M+ YG  + +    +
Sbjct: 126 SMFIPRLPIYDRSWIAAPIGAVAGALGAAFST---------NGPPMVIYG--MLRNLGPA 174

Query: 200 AGVSALIAFPAL-LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           A    L AF     + +  G   +G+   S+       VL  +P  IL + +   +   I
Sbjct: 175 AFRGTLNAFFTANNIAVIGGLATSGILTVSI----FKLVLFCIPTMILGSLVGQYVHKRI 230

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             K   +   +++  +  +
Sbjct: 231 SVKVFRVMVFLLLIASGSM 249


>gi|225850075|ref|YP_002730309.1| hypothetical protein PERMA_0521 [Persephonella marina EX-H1]
 gi|225646435|gb|ACO04621.1| conserved domain protein [Persephonella marina EX-H1]
          Length = 254

 Score = 36.6 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 79/242 (32%), Gaps = 32/242 (13%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPI 109
           PVL+           + +  A+GTSL   A T + +   + + G +  K+          
Sbjct: 27  PVLTIFM-------GVPISTAVGTSLLFSAITKIFASGIYIKRGLVCRKLTLLLASGSIP 79

Query: 110 TTVVTSLMISHVDKSFLNK------AFAIFCLLMG-----ILMLKRDRLYCERKFPDNYV 158
              + S         +         AF IF +L+        M  +          +   
Sbjct: 80  GAFLGSYAFHCFFDRYPAIAGKVIPAFIIFMILVSCTFSYYRMFSKSEKIANFDIRNRPF 139

Query: 159 KY-IWGMVTGFLSGALGVGGGIFT-NLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
              + G+V GF  G   VG G+   ++L+     +  +   T      +++  A      
Sbjct: 140 LIPVIGLVVGFDIGFTSVGAGVIVASILLALCPMNPSRIIGTDIVHGFILSVFA------ 193

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
                 G   +S G V+   +  +L   I    L + +S  + +K      +  +   + 
Sbjct: 194 ------GGLHYSFGGVDTDVLFKLLQGGIFGVILGSLVSPYLPQKPFRFALNSAVLVFAI 247

Query: 277 VF 278
           +F
Sbjct: 248 MF 249


>gi|91978666|ref|YP_571325.1| hypothetical protein RPD_4207 [Rhodopseudomonas palustris BisB5]
 gi|91685122|gb|ABE41424.1| protein of unknown function DUF81 [Rhodopseudomonas palustris
           BisB5]
          Length = 255

 Score = 36.6 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 63/206 (30%), Gaps = 14/206 (6%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A    L V+    ++S   +RRH   + + LK  +    I   V     S V    +   
Sbjct: 48  AAALLLPVLISQDMISLYVYRRHW--DARSLKIMLPGALIGMGVAWWTASIVSDDVVRLI 105

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
                +   + +  R +L   R          WG V+GF S  +  GGG    + ML   
Sbjct: 106 VGGVGVAFVLNVWLRPQLSPARG--STAAGVFWGGVSGFTS-FMNQGGGPPYQVYMLPLQ 162

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
                   T+    A++    +   +  G         S+  + + AV            
Sbjct: 163 LPKLVLVGTTTIFFAILNALKIGPYLLLGQFNAANVATSIALLPLAAVANFA-------- 214

Query: 250 LATKLSYMIGKKYLTIGFSMIMFTTS 275
               L   +          +++F  S
Sbjct: 215 -GIWLIRRMPTGLFYKIAYVLLFVVS 239


>gi|254281824|ref|ZP_04956792.1| conserved domain protein, putative [gamma proteobacterium NOR51-B]
 gi|219678027|gb|EED34376.1| conserved domain protein, putative [gamma proteobacterium NOR51-B]
          Length = 255

 Score = 36.6 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 64/169 (37%), Gaps = 12/169 (7%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +I  ++ A  + G ++ + G GG ++ VPV+            +   +A GT+   I   
Sbjct: 12  HIAALVGAGCIGGFINVMAG-GGSIITVPVMIFL--------GVPGPIANGTNRIAILAQ 62

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
           ++ +     R G  + ++            V  +L+ + ++    N   A+  + + ILM
Sbjct: 63  NITAVSTFFRSGVSHFRLSLSLAACAIPGAVAGALVGATLNPEVFNTVLAVVMVAVLILM 122

Query: 142 -LKRDRLYCERKFPDNYVKYIWGMVT--GFLSGALGVGGGIFTNLLMLF 187
                +       P   + Y   ++   GF  G + +G G     ++  
Sbjct: 123 QTGGAKAVTAESTPPKNLLYGHLLMIAAGFWGGFIQIGMGFILMPILNR 171


>gi|207722113|ref|YP_002252551.1| hypothetical protein (partial sequence c terminus [Ralstonia
           solanacearum MolK2]
 gi|206587287|emb|CAQ17871.1| hypothetical protein (partial sequence c terminus [Ralstonia
           solanacearum MolK2]
          Length = 147

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 7/114 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++A  + G   G+FG G G  ++ V  + F    +  S    +       V   T+V + 
Sbjct: 33  LLAGAVLGFYDGVFGPGTGSFLMIVFVRVFGYDFLHASASTKI-------VNLATNVAAL 85

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +     G +  ++         +     S +       F+ K F +  L + + 
Sbjct: 86  LLLAAKGHVWWQLGLVMAVANVLGNQAGSYLALKHGSRFVRKVFIVVVLALILK 139


>gi|258515750|ref|YP_003191972.1| hypothetical protein Dtox_2549 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257779455|gb|ACV63349.1| protein of unknown function DUF81 [Desulfotomaculum acetoxidans DSM
           771]
          Length = 248

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 62/174 (35%), Gaps = 14/174 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           ++ +  +I+   LS  + GL G G G+ M+  L   F                 ++ VI 
Sbjct: 3   MEALLFLILIVGLSAFVQGLTGFGIGIPMMLFLPFVFSYQ-----------TSVAVTVIC 51

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
              +   +  +    + +K +      + I  ++++  +  +   FL  A  I  LL   
Sbjct: 52  AIVISCVLLFKTRENVEIKKILPVTIPVVIMQIISTYFLFVLSDDFLTIALVIILLLFAG 111

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
           L +  DR +  +    N +          +   LG+GG          +  +I+
Sbjct: 112 LFIVSDRGWQIKASVPNSILAGCATG---VCNMLGIGGPPLGYYYHSIFEENIH 162


>gi|84998478|ref|XP_953960.1| hypothetical protein [Theileria annulata]
 gi|65304958|emb|CAI73283.1| hypothetical protein, conserved [Theileria annulata]
          Length = 410

 Score = 36.2 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 29/60 (48%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           ++  +  + +G +SG +G+G GIF   L+ +        +ATS  ++  ++   L    +
Sbjct: 293 FLNTLVAIFSGLMSGTIGIGSGIFLIPLLQYLNVPPISCSATSNLLTMSMSIATLSRFSF 352


>gi|240102897|ref|YP_002959206.1| putative permease [Thermococcus gammatolerans EJ3]
 gi|239910451|gb|ACS33342.1| Predicted permease [Thermococcus gammatolerans EJ3]
          Length = 279

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 65/167 (38%), Gaps = 12/167 (7%)

Query: 41  GVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKIL 100
           G+G   V++P  +     +G+  ++ + +   T+   +      +   + + G I  + +
Sbjct: 19  GMGAAGVLIP--NYIAMGLGVHAAMLLGLTQNTAELTV------ATAMNWKKGLIEWRKV 70

Query: 101 KDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY 160
              +    +   + + +  H+ +  +   FA+F L     ML       +    D +  Y
Sbjct: 71  ARVLVPAALFVPLGAYVNVHIPRVLVLVVFALFLLFALYRMLSSGMAEGD----DGWKIY 126

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIA 207
             G V GF +G +G+       +   +   +  K +A +A  +  ++
Sbjct: 127 ALGAVEGFTAGLIGMDAAPIALIAFSYLFRNPKKVSANTAATALGVS 173


>gi|332299005|ref|YP_004440927.1| protein of unknown function DUF81 [Treponema brennaborense DSM
           12168]
 gi|332182108|gb|AEE17796.1| protein of unknown function DUF81 [Treponema brennaborense DSM
           12168]
          Length = 264

 Score = 36.2 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 68/196 (34%), Gaps = 23/196 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +  + +  + TL  + G+GGG++M  V+    Q    D  +        S   +   S+
Sbjct: 6   IIYTLLALGATTLGAISGMGGGVIMKTVMDLLGQYSAADIGLL-------SCITVFFMSI 58

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHV-------------DKSFLNKAF 130
           +S ++  R GT    +      +L    V    +   +                  N   
Sbjct: 59  VSLLKSTR-GTGTQNVSAAGAVLLGTGAVTGGFIGQFLFEKLCTAVNDNGLVTVVQNAVL 117

Query: 131 AIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTN-LLMLFYG 189
            +   ++ + ML  +++     F    +    G+  G +S  LG+GGG      LM  + 
Sbjct: 118 LVIICVVFVYMLNSEKVK-NLSFRHWSIYAATGIFLGCMSSFLGIGGGPINVAALMFLFA 176

Query: 190 ASIYKATATSAGVSAL 205
             I  AT  S  +   
Sbjct: 177 FPIKTATFVSIVIILF 192


>gi|256847811|ref|ZP_05553256.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715500|gb|EEU30476.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
          Length = 408

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 42/159 (26%), Gaps = 17/159 (10%)

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI--LMLKRDRLYCERKFPDNYVKY 160
              +L I T +    I  +          I   L+            Y  ++        
Sbjct: 53  MSPLLAIGTGLAIYDIKLIKNGSTTILVEIIISLLASTSYFFFSPLSYASKEIIARTSPT 112

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
           IW ++  F  G  G+ G        +  G       A +  +   +     +    +   
Sbjct: 113 IWDVMIAFFGGVAGIIGASKKEATNIVPG------VAIATALMPPLC---TVGYGIASHN 163

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           L     + LG   +   LI     IL   L  K    + 
Sbjct: 164 LT----FFLGASYL--FLINAVFIILTAFLGVKAMRYLS 196


>gi|322370555|ref|ZP_08045113.1| hypothetical protein ZOD2009_13731 [Haladaptatus paucihalophilus
           DX253]
 gi|320549972|gb|EFW91628.1| hypothetical protein ZOD2009_13731 [Haladaptatus paucihalophilus
           DX253]
          Length = 332

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 30/82 (36%)

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK 123
            +   VA+GTS+  I          + + G +N+ ++   +    +   + +     +D 
Sbjct: 202 GVPAEVAIGTSVLQITIPGSFGAFVYAQEGAVNVPVVASLLLGSALGARIGAAATELIDG 261

Query: 124 SFLNKAFAIFCLLMGILMLKRD 145
             +   FA   L   + +  + 
Sbjct: 262 DDIKGYFAAMLLAGSVAVASKK 283


>gi|299069669|emb|CBJ40942.1| putative integral membrane transmembrane protein [Ralstonia
           solanacearum CMR15]
          Length = 252

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 74/251 (29%), Gaps = 26/251 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L+  A  L+G ++ L G GG  V +P L  A         +    A  +S   + P +  
Sbjct: 7   LLFGAGLLAGAMNALAG-GGSFVTLPALMFA--------GVPSVSANASSTVALLPGAAT 57

Query: 85  SFMEHRR-HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           S   +RR +       ++  + V     +  +L++        +       L+  +    
Sbjct: 58  SAWAYRRDYRGFEQVSMRAMVAVSLTGGLAGALLLMFTPSRAFDFIVPWLLLVGSLAFAF 117

Query: 144 RDR---LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT-ATS 199
             +       R         +         G  G   GI    +    G    +A  A+ 
Sbjct: 118 GRQAGAWLRRRMRIGRPALLLAQCTLAVYGGYFGGAVGIMMMAVWSLLGHDDLRALNASR 177

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +       A+L    +              V     L++L  + L   L   ++  + 
Sbjct: 178 TLLVGATNVVAVLCFAAAKL------------VWWPQTLVMLVAAALGGYLGAHVARRLP 225

Query: 260 KKYLTIGFSMI 270
              + +  S  
Sbjct: 226 VPVVRLLISAF 236


>gi|226304602|ref|YP_002764560.1| hypothetical protein RER_11130 [Rhodococcus erythropolis PR4]
 gi|226183717|dbj|BAH31821.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
            PR4]
          Length = 1444

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 55/169 (32%), Gaps = 16/169 (9%)

Query: 106  VLPITTVVTSLMISHVDKSFLNK-AFAIFCLLMGILM--LKRDRLYCERKFPDNYVKYIW 162
             +       ++ I      +     F    LL+ +L   L   R   +   P    + + 
Sbjct: 1265 WIVPAGTAGTVTIDFPSDRWYRLGIFGGLVLLIPLLFAALVPTRREPKPLTPPRPWRSVA 1324

Query: 163  GMVTGFLSGALGVGGGI--FTNLLMLFYGASIYKATA---TSAGVSALIAFPALLVRIYS 217
                G L+ A  +GGG+     ++    G +  +      T+  +       A++     
Sbjct: 1325 AGWVGMLAAATVIGGGVGAAIAVVCSILGLAALRIFGPARTARILVGTAGVAAMIGITLL 1384

Query: 218  GWGLNGLPPWSLG------FVNIGAVLIILPISILIT--PLATKLSYMI 258
              G    P   +G      F  + A+++    ++     P+  + S+ +
Sbjct: 1385 STGPWRAPGGYVGDSFAIQFSMLVALVVTGLAALPFAGSPMWRRFSHRV 1433


>gi|153003879|ref|YP_001378204.1| hypothetical protein Anae109_1011 [Anaeromyxobacter sp. Fw109-5]
 gi|152027452|gb|ABS25220.1| protein of unknown function DUF81 [Anaeromyxobacter sp. Fw109-5]
          Length = 256

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 58/182 (31%), Gaps = 14/182 (7%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+ +P +            +  H+A+GT+ G     S  + +   R G ++ +  + 
Sbjct: 28  GGGLLTIPAILW--------TGLPPHLALGTNKGQSVFGSFAALVRFARGGLVDGRRARV 79

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR--LYCERKFPDNY--- 157
              +    ++  + ++     S L            + +  R           P  +   
Sbjct: 80  TFPMGLAGSLAGAALVLATPPSTLRPIVLALLAFAALFVGLRRGSPPRLADAPPPRHAAL 139

Query: 158 VKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
                 +  G   G  G G G           G  +  A+A++  V+      AL +   
Sbjct: 140 AAAAIALAIGAYDGFFGPGTGTFLIVAFAALLGDGLAHASASAKVVNFASNLAALALFAS 199

Query: 217 SG 218
            G
Sbjct: 200 RG 201


>gi|239993085|ref|ZP_04713609.1| putative orphan protein [Alteromonas macleodii ATCC 27126]
          Length = 237

 Score = 36.2 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 57/171 (33%), Gaps = 18/171 (10%)

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
            I+  +LK +     +   + S ++  +    +  A A F L +        +   +   
Sbjct: 79  HIDWNMLKYFSLGAIVGAFLASFVVVQLPLVIIQFAVAAFILFLVW----GSKPKAQEMN 134

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
           P    + + G+VT  +S  +G  G       +     S  + T T A    L       V
Sbjct: 135 P--AGRTLAGLVTTLVSMFVGATG-PLVAAFVHRNNYSKMQITGTFASCMTLQHGLKAFV 191

Query: 214 RIYSGWGLNGLPPWSLGFVNIGAVLIILPIS-ILITPLATKLSYMIGKKYL 263
             + G+           F     ++II+  S  L T    K+   +  + L
Sbjct: 192 FTFVGFS----------FAQWAGLIIIMIASGALGTFFGLKVLKRVPAENL 232


>gi|289578203|ref|YP_003476830.1| hypothetical protein Thit_0998 [Thermoanaerobacter italicus Ab9]
 gi|297544484|ref|YP_003676786.1| hypothetical protein Tmath_1055 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|289527916|gb|ADD02268.1| protein of unknown function DUF81 [Thermoanaerobacter italicus Ab9]
 gi|296842259|gb|ADH60775.1| protein of unknown function DUF81 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 117

 Score = 36.2 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 39/89 (43%)

Query: 57  QLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSL 116
             + I      H+A   +L    PT++++ + H +   I  KI+   I    I +VV ++
Sbjct: 26  PALTIFAGTEQHIAQSVNLFSFIPTAIIALIYHFKKKNIKYKIILFIIIGGIIGSVVGAI 85

Query: 117 MISHVDKSFLNKAFAIFCLLMGILMLKRD 145
           + +      L K FA+F   MGI  L   
Sbjct: 86  IAAITKAFILKKIFAVFLFCMGIYELFSK 114


>gi|239630836|ref|ZP_04673867.1| transport protein [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|301065158|ref|YP_003787181.1| putative permease [Lactobacillus casei str. Zhang]
 gi|239527119|gb|EEQ66120.1| transport protein [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|300437565|gb|ADK17331.1| Predicted permease [Lactobacillus casei str. Zhang]
          Length = 257

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 9/142 (6%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
                +++A   +G  S L G+   LV  P L       G+       +A  T+   +  
Sbjct: 4   SIFAFLLIAGIGAGLTSTLAGL-ASLVSYPALLAI----GVPPV----IANVTNTAALVF 54

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T V S +          K L   I ++ + ++  S ++     +   K    F +  G+L
Sbjct: 55  TGVGSAVSSLPELRGRGKFLWRLILLVSLGSIFGSALLLIAPAATFEKVVPFFIIAAGLL 114

Query: 141 MLKRDRLYCERKFPDNYVKYIW 162
           +L   RL  +   P    + + 
Sbjct: 115 LLFSGRLPTQEHRPGEPARTLT 136


>gi|332665305|ref|YP_004448093.1| hypothetical protein Halhy_3362 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332334119|gb|AEE51220.1| protein of unknown function DUF81 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 249

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 20/177 (11%), Positives = 47/177 (26%), Gaps = 9/177 (5%)

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
                +  +     +    +  V  + +   V      +   +        ML RD    
Sbjct: 68  YYRKNVEWRYYLKLLPWTVVGIVFGTWLGEVVSDELFKRIMGVIFAGSVGFMLYRDYRGI 127

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
                  +   I G++ G ++   G   G  T +  L           T+A     +   
Sbjct: 128 TTIPHQWWFAVIMGILAG-VTTMFGNLAGAATTVFFLAMQLPKQSYLGTAAWFFFSVNLI 186

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIG 266
               +I            ++ +  +   L+++PI +    +   L      +     
Sbjct: 187 KTPFQILF--------WGTISWDTLKINLLLVPILLFGVAMGIWLVQRFSDRIFRRM 235


>gi|254439958|ref|ZP_05053452.1| conserved domain protein, putative [Octadecabacter antarcticus 307]
 gi|198255404|gb|EDY79718.1| conserved domain protein, putative [Octadecabacter antarcticus 307]
          Length = 224

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 37/125 (29%), Gaps = 11/125 (8%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           ++ VPVLS           I    A G  L V   + +     +R        +LK    
Sbjct: 6   MLAVPVLSLV---------ISPVTAAGLLLPVFLFSDIFGVWAYRHQ--FRRDLLKIAAV 54

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMV 165
                  +       V ++ +     +   L  +  L R R     + P       W  +
Sbjct: 55  GTIFGCSIGWATAEIVSENLVRVLIGVIGALFALNFLLRHRADAAPRAPTWARGVFWTTI 114

Query: 166 TGFLS 170
            GF S
Sbjct: 115 AGFTS 119


>gi|145297856|ref|YP_001140697.1| integral membrane protein [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850628|gb|ABO88949.1| conserved integral membrane protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 286

 Score = 36.2 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 28/81 (34%)

Query: 75  LGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFC 134
           +G  A  SV S     R G  + + +       PI  V+ +L++  +D   L    A   
Sbjct: 200 MGSTAVLSVFSAGTFIRKGAFDARAVLAVAIFGPIGVVLAALLVQSMDMEMLKWLVAFIV 259

Query: 135 LLMGILMLKRDRLYCERKFPD 155
           +     M    R    +  P 
Sbjct: 260 IYTSWTMYASWRAERRKAQPR 280


>gi|169632006|ref|YP_001705655.1| hypothetical protein MAB_4933 [Mycobacterium abscessus ATCC 19977]
 gi|169243973|emb|CAM65001.1| Conserved hypothetical protein [Mycobacterium abscessus]
          Length = 255

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 67/183 (36%), Gaps = 13/183 (7%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGGL+++PVL   F        +    A+GT+       +  + +       +N ++L  
Sbjct: 25  GGGLILIPVLMLVF------PGMAPATALGTNKLTALSGTASAAIRLFPRTPLNWRVLVG 78

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK------FPDN 156
             FV        +   S +  S       +  + +G+ +  R +     +          
Sbjct: 79  AFFVAAAFASAGAYTASRLPVSVFKPVVLVLLVAVGVFVATRPQFGTTTEGTARTKTATL 138

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRI 215
               I  +   F  G +G G G F  + +    G +  +++AT+  +++     AL+V  
Sbjct: 139 TALTIAAVAIAFYDGIMGPGTGTFLIITLTVAAGMTFLESSATAKVLNSGTNVGALVVFA 198

Query: 216 YSG 218
             G
Sbjct: 199 SQG 201


>gi|237805569|ref|ZP_04592273.1| hypothetical protein POR16_33823 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331026676|gb|EGI06731.1| hypothetical protein POR16_33823 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 143

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 38/86 (44%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
           A  ++G+   +   +A GT+L ++ P  +++   + +   I ++     I        +T
Sbjct: 29  AIPVLGVLFGLDQQLAQGTALLMVLPNVLLALWRYNQRNRILLRNALMLIIPSFFMAWLT 88

Query: 115 SLMISHVDKSFLNKAFAIFCLLMGIL 140
           SL+   VD   +   F  F +++ + 
Sbjct: 89  SLLAVRVDPQGMRLGFIAFLVVLTVF 114


>gi|114705814|ref|ZP_01438717.1| hypothetical protein FP2506_15149 [Fulvimarina pelagi HTCC2506]
 gi|114538660|gb|EAU41781.1| hypothetical protein FP2506_15149 [Fulvimarina pelagi HTCC2506]
          Length = 251

 Score = 36.2 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 84/258 (32%), Gaps = 29/258 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L+ ++  L+G ++ +   GGG  +      AF L+G+       VA  +S     P  
Sbjct: 6   IALLFLSGLLAGAINAV--AGGGTFIS---FGAFSLIGMPPV----VANASSAIAQLPGY 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + S + +R+      + L        + +V+ ++++  +D            L    L  
Sbjct: 57  LTSTLPYRKDIAKLWRGLVLLAIASILGSVIGAMILLWLDNDRFRVMVPWLLLAATALFA 116

Query: 143 KRDRLYCERKFP------DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT 196
               L   R+          Y   I   +     G  G G GI     +           
Sbjct: 117 AGPWLRPRREHEEAAAKGRTYASPIVQFLGSIYGGFFGAGMGIMMLATLGL--------- 167

Query: 197 ATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSY 256
             S     L A   +L  + +   +        G V+    L ++P   L      +++ 
Sbjct: 168 TESGDYHRLNAIKNVLSNVIAVVAIVVFVSG--GVVDWPGALAMVPGIALGGYFGVRIAQ 225

Query: 257 MIG---KKYLTIGFSMIM 271
            +     +   IGF + +
Sbjct: 226 RVPQIAVRIFVIGFGIFL 243


>gi|294338675|emb|CAZ87004.1| putative permease [Thiomonas sp. 3As]
          Length = 284

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 60/179 (33%), Gaps = 20/179 (11%)

Query: 50  PVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI---NMKILKDWIFV 106
           PVL   F L     +    V    +L ++     +    H     +   +  ++ + +  
Sbjct: 48  PVLVGLFDL-----ATLQAVIANKALSLLVVGVAIVARLHAVPLAVLLPHWPVVLNLLAG 102

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPD----------N 156
             +     +     + +  L+    +  +L+   M   ++++  R  P+           
Sbjct: 103 SLLGAWWAAGWAMRLPRKTLDGVLLVLLILLACTMAA-EQVFGLRALPNLAQILSPWGHA 161

Query: 157 YVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
            +    G+V G  +  +GV GG +    ++L +G  +  A + S  VS           
Sbjct: 162 ALGIAAGLVIGLFAAVMGVAGGELLIPTIVLLWGLDLKLAGSLSLLVSLPTMIVGFARY 220


>gi|227544295|ref|ZP_03974344.1| membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300909484|ref|ZP_07126945.1| conserved hypothetical protein [Lactobacillus reuteri SD2112]
 gi|68160989|gb|AAY86926.1| lr2019 [Lactobacillus reuteri]
 gi|227185703|gb|EEI65774.1| membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300893349|gb|EFK86708.1| conserved hypothetical protein [Lactobacillus reuteri SD2112]
          Length = 408

 Score = 36.2 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 42/159 (26%), Gaps = 17/159 (10%)

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI--LMLKRDRLYCERKFPDNYVKY 160
              +L I T +    I  +          I   L+            Y  ++        
Sbjct: 53  MSPLLAIGTGLAIYDIKLIKNGSTTILVEIIISLLASTSYFFFSPLSYASKEIIARTSPT 112

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSGWG 220
           IW ++  F  G  G+ G        +  G       A +  +   +     +    +   
Sbjct: 113 IWDVMIAFFGGVAGIIGASKKEATNIVPG------VAIATALMPPLC---TVGYGIASHN 163

Query: 221 LNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
           L     + LG   +   LI     IL   L  K    + 
Sbjct: 164 LT----FFLGASYL--FLINAVFIILTAFLGVKAMRYLS 196


>gi|226329578|ref|ZP_03805096.1| hypothetical protein PROPEN_03487 [Proteus penneri ATCC 35198]
 gi|225202764|gb|EEG85118.1| hypothetical protein PROPEN_03487 [Proteus penneri ATCC 35198]
          Length = 262

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 100/275 (36%), Gaps = 37/275 (13%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
            +   +      G +    GVGGG++++PVL+  F +  +       +A+ T+  +    
Sbjct: 2   LLITTLAVGAAIGLIISTTGVGGGVIVLPVLTYFFGMNAL-------MAVATANLLSMLM 54

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK------------SFLNKA 129
            V S   H R G I  K     + ++  +T + S++++++              + L   
Sbjct: 55  KVTSSYMHFRLGNIPFKRAMIVLGIMLPSTFLASVLVNYLGSLEQYQQQVEWGINALVVG 114

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLML--- 186
             IF L + +  +         +        I  ++   ++  + +G       +++   
Sbjct: 115 AIIFSLFLFVQRMFFSLPPVVVENIKLAPLNIKALLLPAIAAGVVLGATGVGGGVVVLPL 174

Query: 187 ---FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPI 243
              +   SI +A  TS   + L++  + L  +  G     L             L++   
Sbjct: 175 LLRYANLSIKQAIGTSIFTTTLLSGSSALAYMQDGHTDIHL------------ALLLFLG 222

Query: 244 SILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVF 278
           S++  PL+  L   +  +       +++  ++ + 
Sbjct: 223 SLISIPLSKWLLIKMPDRIFQYATLILIICSAVMM 257


>gi|227529822|ref|ZP_03959871.1| integral membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227350306|gb|EEJ40597.1| integral membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 255

 Score = 36.2 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L I    + G  +G FG   G+V++ +L+        D+   +  A+     V   T++
Sbjct: 139 VLYIFLLIVVGGYAGYFGAASGIVILVLLTYL-----TDEDFLVSNAIKN--AVCGFTNL 191

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
           ++ + +     I           + I   +  +++ +V    +    A+  L   I+  K
Sbjct: 192 VALIIYSFTSKIYWWDAIPMAVGMFIGGYLGPIVLRYVPAKLMRWVIALLALTQAIIFFK 251

Query: 144 R 144
           +
Sbjct: 252 Q 252



 Score = 36.2 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 44/120 (36%), Gaps = 4/120 (3%)

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           T+   +   S+ +     R    + + +  + F   I +++  +++         +    
Sbjct: 51  TNDAALIWNSLGAVFASGRELHGHWRQVWIYGFFTVIGSIIGCILLLAFPGKVFERVVPF 110

Query: 133 FCLLMGILMLKRDR--LYCERKFPD--NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           F L+ G ++L   +      ++ P     +     +V G  +G  G   GI   +L+ + 
Sbjct: 111 FILIAGAMILVSGKHQPDLTKQKPQWLKVLYIFLLIVVGGYAGYFGAASGIVILVLLTYL 170


>gi|149913130|ref|ZP_01901664.1| hypothetical protein RAZWK3B_04040 [Roseobacter sp. AzwK-3b]
 gi|149813536|gb|EDM73362.1| hypothetical protein RAZWK3B_04040 [Roseobacter sp. AzwK-3b]
          Length = 251

 Score = 36.2 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 78/255 (30%), Gaps = 22/255 (8%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           +   + + A  L+G   G FG G       +L+       +        A+G  L ++  
Sbjct: 7   EVFAVAVPAVLLAGISKGGFGSGAAFAGASILALV-----VPPGQ----ALGIMLPLLML 57

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL-LMGI 139
             V +   + +  +         ++       + + + S  D           CL  +G 
Sbjct: 58  IDVSTLRPYWKRWS--WVDANRLLWGGVPGVAIGAALYSVADADLFRLLIGGICLAFIGW 115

Query: 140 LMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M  R  L    + P      I   V    +  +   GG    + +L       +  AT+
Sbjct: 116 QMSLRAGLLRPSQRPMPGWAGIVAGVVAGFTSFVSHAGGPPAAVYLLSRRLDKTQFQATT 175

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             V         +   + G        + L         I+ P+++    L  + ++ + 
Sbjct: 176 VLVFWAYNVVKFVPYAFLGIFTVETLVFDL---------ILAPVALFGAWLGVR-AHRVV 225

Query: 260 KKYLTIGFSMIMFTT 274
            + L  G + ++   
Sbjct: 226 PEGLFFGITYVLLAV 240


>gi|253690348|ref|YP_003019538.1| hypothetical protein PC1_3987 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251756926|gb|ACT15002.1| protein of unknown function DUF81 [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 257

 Score = 36.2 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 54/187 (28%), Gaps = 26/187 (13%)

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
           I   +   +     I   + + ++  +  S    A A F L                  P
Sbjct: 79  IVWPLALWFFIGSVIGIALGAPVVVWIPDSVAKIALASFILWSVFR-------KRTATKP 131

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSAL-----IAFP 209
            N + +I G     L   +    G     L+   G +     AT A    L     I   
Sbjct: 132 VNRLFFILGGALTSLGTMIVGATGPMVAGLISSQGVTKQPLIATHALCMVLQHGLKILAF 191

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            ++   Y  W              +  +  ++   +L T L T+L   + +K     F +
Sbjct: 192 GMMGFAYHDW--------------LPMLAAMIVSGVLGTWLGTRLLDNLPEKLFRTTFRL 237

Query: 270 IMFTTSF 276
            M   S 
Sbjct: 238 TMLVLSA 244


>gi|290956873|ref|YP_003488055.1| channel transporter [Streptomyces scabiei 87.22]
 gi|260646399|emb|CBG69495.1| putative channel transporter [Streptomyces scabiei 87.22]
          Length = 142

 Score = 36.2 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 46/136 (33%), Gaps = 8/136 (5%)

Query: 141 MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIF-TNLLMLFYGASIYKATATS 199
           M         R  P   V +  G   G L G +G+GG  F   LL+  +G +   A   +
Sbjct: 1   MRTDQNFASLRSTPTAPVVFGAGAAIGVLGGMIGLGGAEFRLPLLISLFGFAALSAVILN 60

Query: 200 AGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIG 259
             +S ++   AL  R+ +         W          + +L  S+L        +  + 
Sbjct: 61  KAMSLVVVLVALPARLAAVPAAELAARW-------PVAVNLLAGSLLGAWAGASWAVRMR 113

Query: 260 KKYLTIGFSMIMFTTS 275
              L    + +M   +
Sbjct: 114 SSTLYKVLAALMVLMA 129


>gi|289673828|ref|ZP_06494718.1| hypothetical protein PsyrpsF_11277 [Pseudomonas syringae pv.
           syringae FF5]
          Length = 92

 Score = 36.2 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 27/82 (32%)

Query: 68  HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLN 127
           H+ +GT+       S  +     R    +       +    +   + +++  ++   +LN
Sbjct: 3   HLVLGTNKLSSTFGSATASFTFYRRKLFDPGQWLHAVAGTAVGAALGAVIAHYLPAEWLN 62

Query: 128 KAFAIFCLLMGILMLKRDRLYC 149
           +   +     G+ +L       
Sbjct: 63  QMLPVIVFGCGLYLLFGGTPKA 84


>gi|145493138|ref|XP_001432565.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124399678|emb|CAK65168.1| unnamed protein product [Paramecium tetraurelia]
          Length = 441

 Score = 36.2 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 13/25 (52%), Positives = 18/25 (72%)

Query: 29  ASFLSGTLSGLFGVGGGLVMVPVLS 53
           A FL+G ++G  G+GGGL+MV  L 
Sbjct: 309 AGFLAGFITGFLGMGGGLIMVTFLL 333


>gi|59711726|ref|YP_204502.1| permease [Vibrio fischeri ES114]
 gi|59479827|gb|AAW85614.1| predicted permease [Vibrio fischeri ES114]
          Length = 237

 Score = 36.2 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 51/147 (34%), Gaps = 17/147 (11%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F+   +    G G  +V  P+L            +           V    S+++  +H 
Sbjct: 13  FIGSFVQSAIGFGLAIVTAPLLFLISPDYVPAPIVI----------VGLFLSIINAYKH- 61

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
               ++ + L          ++   L++ +VD   L+    +  LL   + L   R+   
Sbjct: 62  -KANVSFRGLGYAFLGRIPGSIFGGLLLYYVDAKLLSLWIGVVVLLAVAISLLPFRIE-- 118

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGG 177
              P+N    I G  +G    + G+GG
Sbjct: 119 ---PNNSRMTIAGFFSGLFGTSSGIGG 142


>gi|89094932|ref|ZP_01167863.1| hypothetical protein MED92_00715 [Oceanospirillum sp. MED92]
 gi|89080798|gb|EAR60039.1| hypothetical protein MED92_00715 [Oceanospirillum sp. MED92]
          Length = 260

 Score = 36.2 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 97/267 (36%), Gaps = 26/267 (9%)

Query: 17  DCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLG 76
           D +++   L +++ F +G LS + G G GL            + +   +    A+ T   
Sbjct: 2   DLILEQAGLFLLSLFANG-LSAMAGGGAGL--------LQLPVLLFLGLSFSTALATHKI 52

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
                 V + + H R G ++++     +       VV + +I  + + +   +  +    
Sbjct: 53  ASVALGVGATIRHLREGKLDLRFCTFILCCGLPGVVVGADIILKIPEGWTIFSLGVLTSG 112

Query: 137 MGILMLKRDRLYCERKFPDNYVK-YIWG----MVTGFLSGALGVGGGIFTNLLML-FYGA 190
           +G+   ++  L  E +  +   + +I G     + G L+G+L  G G+F  L ++ ++G 
Sbjct: 113 LGLYSFRKKSLGMEHQPRNRDRQGFIIGGLALFIIGALNGSLTSGTGLFVTLWLVRWFGL 172

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
               A      +  +  F      I           W      + A+L+    + + + L
Sbjct: 173 DYKTAVTY--VLILVGLFWNSTGAITVALQQVPRWDW------LPALLV---GATIGSYL 221

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFV 277
              L+   G K +   F  +       
Sbjct: 222 GAHLAITQGNKLVKRAFETLTVMVGIK 248


>gi|312602308|ref|YP_004022153.1| hypothetical protein RBRH_00556 [Burkholderia rhizoxinica HKI 454]
 gi|312169622|emb|CBW76634.1| unnamed protein product [Burkholderia rhizoxinica HKI 454]
          Length = 251

 Score = 36.2 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 72/205 (35%), Gaps = 15/205 (7%)

Query: 14  LSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGT 73
           +  D  V ++ ++ +   L+  + G+ G G  LV  P+L++   +  I   +        
Sbjct: 1   MIFDLTVTHVFIVWLGIALAYVVFGMTGFGTALVASPLLAQFIPVSHIVPLLA------- 53

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
            L      +     + R+     +  LK  + ++   + + ++++       L     IF
Sbjct: 54  -LLDFCAATTNVVRDGRKA---ELGELKRLVPLMVAGSGMGAVILLATKPDLLLLLLGIF 109

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIY 193
            +      L   R   +     ++    +G+V G  S   G GG I+   L        +
Sbjct: 110 VIGYAAYSLSGYRPMTQ---LSSWSSVPFGLVGGIFSALFGSGGFIYAIYLQGRLENKEH 166

Query: 194 KATATSAGVSALIAFPALLVRIYSG 218
                +  +        L++ + +G
Sbjct: 167 IRITQTTLIGLST-LTRLVMFLVAG 190


>gi|260061392|ref|YP_003194472.1| hypothetical protein RB2501_07325 [Robiginitalea biformata
           HTCC2501]
 gi|88785524|gb|EAR16693.1| hypothetical protein RB2501_07325 [Robiginitalea biformata
           HTCC2501]
          Length = 252

 Score = 36.2 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 49/137 (35%), Gaps = 9/137 (6%)

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
           + + + + RH       +  ++  +    ++   +   + ++    A A   +    +M 
Sbjct: 65  IFAVIYYHRHT--RWSYIIKFLPWMIGGILIGVWVGKDLPETLFKWAMAAIIIGSVGVM- 121

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSG---ALGVGGGIFTNLLMLFYGASIYKATATS 199
                +  RK       + +G   G L+G    +G   G F+N+  L       +   T+
Sbjct: 122 ---AWWDLRKSQRVPTHWAFGGFVGILAGFTTMIGNLAGAFSNIYFLAMRLPKNEFIGTA 178

Query: 200 AGVSALIAFPALLVRIY 216
           A +  +I    L   I+
Sbjct: 179 AWLFLIINVFKLPFHIF 195


>gi|154500402|ref|ZP_02038440.1| hypothetical protein BACCAP_04069 [Bacteroides capillosus ATCC
           29799]
 gi|150270907|gb|EDM98190.1| hypothetical protein BACCAP_04069 [Bacteroides capillosus ATCC
           29799]
          Length = 103

 Score = 36.2 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 44/98 (44%), Gaps = 7/98 (7%)

Query: 46  LVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIF 105
           +++VP+L+   +  G++       A  TS+ +I P   +S   +   G ++ ++   ++ 
Sbjct: 12  MILVPLLT---RWCGLEQ----RKAFATSVAIILPLCALSSAVYFFRGGLDFRLALPYLI 64

Query: 106 VLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              I       +   ++  +L + FA+F L  G+  L 
Sbjct: 65  GGLIGGFAGGRLFRRLNMDWLRRVFALFILYGGVKALF 102


>gi|167040476|ref|YP_001663461.1| hypothetical protein Teth514_1845 [Thermoanaerobacter sp. X514]
 gi|300914526|ref|ZP_07131842.1| protein of unknown function DUF81 [Thermoanaerobacter sp. X561]
 gi|307724238|ref|YP_003903989.1| hypothetical protein Thet_1091 [Thermoanaerobacter sp. X513]
 gi|166854716|gb|ABY93125.1| protein of unknown function DUF81 [Thermoanaerobacter sp. X514]
 gi|300889461|gb|EFK84607.1| protein of unknown function DUF81 [Thermoanaerobacter sp. X561]
 gi|307581299|gb|ADN54698.1| protein of unknown function DUF81 [Thermoanaerobacter sp. X513]
          Length = 251

 Score = 36.2 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 86/263 (32%), Gaps = 29/263 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            LI++AS L+G  + + G GG L+  P L            I    A  T+   +   SV
Sbjct: 5   ILILMASILAGATNSIAG-GGTLITFPALVWV--------GINPLAANMTNTVALWTGSV 55

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              +  +   +   ++LK       +  ++ + ++        N       L   +++  
Sbjct: 56  TGALGFKERLSQTKELLKFLTLPSLLGGILGAYLLMITPHKVFNFVVPFLVLFATVILAL 115

Query: 144 RDRLY-------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA-SIYKA 195
            DR+          R+       +I   +T    G    G GI     +   G   I+ A
Sbjct: 116 NDRINKFNLDSEEGREKKSLVFVFILQFLTSLYGGYFAAGIGILMLATLGIAGITDIHTA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
                 +S  I   + LV ++SG             V     +I++    L   L   +S
Sbjct: 176 NGIKNVLSLFINITSGLVLLFSGK------------VVWPFAIILMIGFALGGYLGAIMS 223

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
                + +     +     + +F
Sbjct: 224 QRFDSRKVKNFVVLWGIILALIF 246


>gi|197335568|ref|YP_002155916.1| conserved domain protein, putative [Vibrio fischeri MJ11]
 gi|197317058|gb|ACH66505.1| conserved domain protein, putative [Vibrio fischeri MJ11]
          Length = 237

 Score = 36.2 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 51/147 (34%), Gaps = 17/147 (11%)

Query: 31  FLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHR 90
           F+   +    G G  +V  P+L            +           V    S+++  +H 
Sbjct: 13  FIGSFVQSAIGFGLAIVTAPLLFLISPDYVPAPIVI----------VGLFLSIINAYKH- 61

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCE 150
               ++ + L          +V   L++ +VD   L+    +  LL   + L   R+   
Sbjct: 62  -KANVSFRGLGYAFLGRIPGSVFGGLLLYYVDAKLLSLWIGVVVLLAVAISLLPFRIE-- 118

Query: 151 RKFPDNYVKYIWGMVTGFLSGALGVGG 177
              P+N    I G  +G    + G+GG
Sbjct: 119 ---PNNSRMTIAGFFSGLFGTSSGIGG 142


>gi|328541988|ref|YP_004302097.1| hypothetical protein [polymorphum gilvum SL003B-26A1]
 gi|326411738|gb|ADZ68801.1| Conserved domain protein, putative [Polymorphum gilvum SL003B-26A1]
          Length = 258

 Score = 36.2 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 57/185 (30%), Gaps = 17/185 (9%)

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
             ++  I+  +         +   ++  +  + L     +F L       +  R   E  
Sbjct: 77  KHVHWDIMLWFTLGAVFGAAIGGSIVVTLPSAILRLGVGLFVLWSVW--GRPPRFNGEAA 134

Query: 153 FPDNYVKYIWGMVTGFLSGALG-VGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPAL 211
            P          +     GA G +G  + + L +  +G    +A           A   +
Sbjct: 135 RPAMAAAGFAATLLSMFFGAAGPIGAAVLSTLGLDRHGFVANQAATALTMHVLKFAAFGV 194

Query: 212 LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIM 271
           L   ++ W               G ++ ++      T + ++L   + +K    GF ++M
Sbjct: 195 LGFAFAPWA--------------GLIVAMVLSGFGGTVVGSRLLGRMDEKTFKKGFKLVM 240

Query: 272 FTTSF 276
              + 
Sbjct: 241 TLLAA 245


>gi|302552704|ref|ZP_07305046.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302470322|gb|EFL33415.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 261

 Score = 35.8 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 69/203 (33%), Gaps = 13/203 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           +    L   ++   GV G + ++PV    F       ++       T+L         + 
Sbjct: 10  LAVGMLIAAVTAPVGVSGAVFLLPVQLSVF-------AVPNPAVTPTNLLYNVVAGPGAL 62

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLM-ISHVDK-SFLNKAFAIFCLLMGILMLKR 144
           + +RR+G +   +++  +       ++ +++ +  +   +      A   L +GI ++ R
Sbjct: 63  LRYRRNGALRGPLVRRLVLGTLPGVILGAVIRVFALPGPNVFRLLVAALMLPLGIWLIVR 122

Query: 145 ----DRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSA 200
               +     R  P         +  G + G  G+GGG     +++  G  + +    + 
Sbjct: 123 TLHPEPPESRRPEPAPRTVTGLALAVGVVGGVYGIGGGSILGPVLVGRGVPVSQVAPAAL 182

Query: 201 GVSALIAFPALLVRIYSGWGLNG 223
             +   +              +G
Sbjct: 183 ASTFATSLVGASTYALLSLAHSG 205


>gi|269126825|ref|YP_003300195.1| hypothetical protein Tcur_2602 [Thermomonospora curvata DSM 43183]
 gi|268311783|gb|ACY98157.1| protein of unknown function DUF81 [Thermomonospora curvata DSM
           43183]
          Length = 275

 Score = 35.8 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 65/199 (32%), Gaps = 13/199 (6%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+  A    G+L G+ G+GG    +P+L   F    +   I     +  ++ +I   + 
Sbjct: 17  WLVFSAGAAVGSLGGMIGLGGAEFRLPLLIGLFGFAALSAVI-----VNKAMSLIVVLTA 71

Query: 84  MSFMEHR---RHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           +            + +     + +    I     +     +  S L+K  A   +LM   
Sbjct: 72  IPARLAAVPLAELSAHWAAAANLLAGSLIGAWAGAAWTVRMRSSTLHKVLAALLVLMAAA 131

Query: 141 MLKRDRLYCER-KFPDN---YVKYIWGMVTGFLSGALGVGGG-IFTNLLMLFYGASIYKA 195
           ++            P           G   G ++  +GV GG +    ++L Y   I  A
Sbjct: 132 LVAAHAATPGTLHLPGTAQAIAGIAAGFGIGVVAAIMGVAGGELLIPTIVLLYAVEIKIA 191

Query: 196 TATSAGVSALIAFPALLVR 214
            + S  VS      A    
Sbjct: 192 GSLSLLVSLPTMLVAFARY 210


>gi|124485642|ref|YP_001030258.1| hypothetical protein Mlab_0820 [Methanocorpusculum labreanum Z]
 gi|124363183|gb|ABN06991.1| permease [Methanocorpusculum labreanum Z]
          Length = 293

 Score = 35.8 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 11/95 (11%), Positives = 31/95 (32%), Gaps = 4/95 (4%)

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFA---IFCLLMGILMLKRDRLYCERKF 153
               +  I  L +   + + +   +   ++        +F + +  ++     +  E   
Sbjct: 169 WTTFRQMIPYLLLGAAIGAFIYGFLPADWILAVAGPQNLFAIPVAAIIGIPLYIRAETIL 228

Query: 154 PDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY 188
           P +      GM  G ++  L +GG   +   +   
Sbjct: 229 PISAALLSKGMGVGTVAALL-IGGAGMSIPEITML 262


>gi|15603303|ref|NP_246377.1| hypothetical protein PM1438 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12721816|gb|AAK03522.1| GlpG [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 291

 Score = 35.8 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 49/144 (34%), Gaps = 19/144 (13%)

Query: 51  VLSKAFQLMGIDDSIC--MHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV-- 106
           ++   FQL G  DSI   MH    T         +     H     I   +L  W+F   
Sbjct: 120 LVIYIFQLTGYQDSILTLMHYPENTQQDTQFWRYLSHTFVHLSPLHILFNLLWWWLFGHT 179

Query: 107 -------------LPITTVVTSLMISHVDKSFLNKAFAIFCLLMG-ILMLKRDRLYCERK 152
                          I  +++    +     +      +   ++G +L+  +     +  
Sbjct: 180 IEHHFGTGKLFQLFLIAGLLSGFAQNIASGPYFFGLSGVVYAVLGYVLIYDKWGKNADFT 239

Query: 153 FPDNY-VKYIWGMVTGFLSGALGV 175
            P  + +  I G+V+GF+S   GV
Sbjct: 240 LPSGFSLMLIVGIVSGFISPLFGV 263


>gi|294676274|ref|YP_003576889.1| hypothetical protein RCAP_rcc00717 [Rhodobacter capsulatus SB 1003]
 gi|294475094|gb|ADE84482.1| protein of unknown function DUF81, transmembrane [Rhodobacter
           capsulatus SB 1003]
          Length = 246

 Score = 35.8 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 13/190 (6%)

Query: 70  AMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKA 129
           A G  L V   + +   + +RR    + ++LK  +    +         S V ++ +   
Sbjct: 45  AAGLLLPVYIVSDLFGLIAYRR--DFDARVLKILVPATALGVGFGWATASVVPETAVTAL 102

Query: 130 FAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYG 189
             +  ++  +  L R RL   R+       + WG +TGF S  +   GG       +   
Sbjct: 103 VGLIGVVFALNALARPRLGGARRARLAPGLF-WGTITGFTS-FVSHSGGPPYQAYTIPLN 160

Query: 190 ASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITP 249
                   TS  + A +    L+     G              ++G  L + P++ +   
Sbjct: 161 LPRTVFAGTSTLLFAWVNAIKLIPYAALGQINVT---------SLGTALKLAPVAAVSVF 211

Query: 250 LATKLSYMIG 259
              KL  ++ 
Sbjct: 212 FGVKLVRILP 221


>gi|104781259|ref|YP_607757.1| hypothetical protein PSEEN2125 [Pseudomonas entomophila L48]
 gi|95110246|emb|CAK14953.1| conserved hypothetical protein; putative membrane protein
           [Pseudomonas entomophila L48]
          Length = 248

 Score = 35.8 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 11/129 (8%)

Query: 20  VDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIA 79
           +D + LI + + ++G + GL G   G+V       +F   G++  +   + +  SL    
Sbjct: 1   MDPLYLIALGAIVAGFVQGLSGFAFGMVA-----MSFWAWGLEPRVAAVLTVFGSLTGQL 55

Query: 80  PTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGI 139
                           +  +L  ++        +   ++ H+D  +    F    +L   
Sbjct: 56  IAVFSV------RRGFSWPLLWPFVLGGLAGIPLGVWVLPHLDMLWFKAVFGTLLVLWCP 109

Query: 140 LMLKRDRLY 148
           LML   RL 
Sbjct: 110 LMLLAPRLP 118


>gi|15804464|ref|NP_290504.1| hypothetical protein Z5415 [Escherichia coli O157:H7 EDL933]
 gi|15834055|ref|NP_312828.1| hypothetical protein ECs4801 [Escherichia coli O157:H7 str. Sakai]
 gi|168748838|ref|ZP_02773860.1| putative domain of unknown function [Escherichia coli O157:H7 str.
           EC4113]
 gi|168755551|ref|ZP_02780558.1| putative domain of unknown function [Escherichia coli O157:H7 str.
           EC4401]
 gi|168761750|ref|ZP_02786757.1| putative domain of unknown function [Escherichia coli O157:H7 str.
           EC4501]
 gi|168768168|ref|ZP_02793175.1| putative domain of unknown function [Escherichia coli O157:H7 str.
           EC4486]
 gi|168775300|ref|ZP_02800307.1| putative domain of unknown function [Escherichia coli O157:H7 str.
           EC4196]
 gi|168780784|ref|ZP_02805791.1| putative domain of unknown function [Escherichia coli O157:H7 str.
           EC4076]
 gi|168786723|ref|ZP_02811730.1| putative domain of unknown function [Escherichia coli O157:H7 str.
           EC869]
 gi|168799555|ref|ZP_02824562.1| putative domain of unknown function [Escherichia coli O157:H7 str.
           EC508]
 gi|195937517|ref|ZP_03082899.1| hypothetical protein EscherichcoliO157_13877 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208808263|ref|ZP_03250600.1| putative membrane protein [Escherichia coli O157:H7 str. EC4206]
 gi|208813523|ref|ZP_03254852.1| putative membrane protein [Escherichia coli O157:H7 str. EC4045]
 gi|208821691|ref|ZP_03262011.1| putative membrane protein [Escherichia coli O157:H7 str. EC4042]
 gi|209396303|ref|YP_002273395.1| hypothetical membrane protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|217325448|ref|ZP_03441532.1| hypothetical membrane protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254795872|ref|YP_003080709.1| hypothetical protein ECSP_4934 [Escherichia coli O157:H7 str.
           TW14359]
 gi|261223506|ref|ZP_05937787.1| hypothetical protein EscherichiacoliO157_02701 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261257269|ref|ZP_05949802.1| hypothetical protein EscherichiacoliO157EcO_15792 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|12518764|gb|AAG59068.1|AE005619_1 hypothetical protein Z5415 [Escherichia coli O157:H7 str. EDL933]
 gi|13364277|dbj|BAB38224.1| hypothetical membrane protein [Escherichia coli O157:H7 str. Sakai]
 gi|187769172|gb|EDU33016.1| putative domain of unknown function [Escherichia coli O157:H7 str.
           EC4196]
 gi|188016799|gb|EDU54921.1| putative domain of unknown function [Escherichia coli O157:H7 str.
           EC4113]
 gi|189001435|gb|EDU70421.1| putative domain of unknown function [Escherichia coli O157:H7 str.
           EC4076]
 gi|189357183|gb|EDU75602.1| putative domain of unknown function [Escherichia coli O157:H7 str.
           EC4401]
 gi|189362751|gb|EDU81170.1| putative domain of unknown function [Escherichia coli O157:H7 str.
           EC4486]
 gi|189367901|gb|EDU86317.1| putative domain of unknown function [Escherichia coli O157:H7 str.
           EC4501]
 gi|189373422|gb|EDU91838.1| putative domain of unknown function [Escherichia coli O157:H7 str.
           EC869]
 gi|189378010|gb|EDU96426.1| putative domain of unknown function [Escherichia coli O157:H7 str.
           EC508]
 gi|208728064|gb|EDZ77665.1| putative membrane protein [Escherichia coli O157:H7 str. EC4206]
 gi|208734800|gb|EDZ83487.1| putative membrane protein [Escherichia coli O157:H7 str. EC4045]
 gi|208741814|gb|EDZ89496.1| putative membrane protein [Escherichia coli O157:H7 str. EC4042]
 gi|209157703|gb|ACI35136.1| hypothetical membrane protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|217321669|gb|EEC30093.1| hypothetical membrane protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254595272|gb|ACT74633.1| predicted protein [Escherichia coli O157:H7 str. TW14359]
 gi|320191030|gb|EFW65680.1| Inner membrane protein [Escherichia coli O157:H7 str. EC1212]
 gi|320639217|gb|EFX08844.1| hypothetical protein ECO5101_06654 [Escherichia coli O157:H7 str.
           G5101]
 gi|320644605|gb|EFX13659.1| hypothetical protein ECO9389_05503 [Escherichia coli O157:H- str.
           493-89]
 gi|320649929|gb|EFX18437.1| hypothetical protein ECO2687_15992 [Escherichia coli O157:H- str. H
           2687]
 gi|320666022|gb|EFX33041.1| hypothetical protein ECOSU61_21617 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326338117|gb|EGD61947.1| Inner membrane protein [Escherichia coli O157:H7 str. 1044]
 gi|326342588|gb|EGD66361.1| Inner membrane protein [Escherichia coli O157:H7 str. 1125]
          Length = 291

 Score = 35.8 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 87/259 (33%), Gaps = 28/259 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +C++I   FL   +    G GGGL  +P+++               V M T L VI  
Sbjct: 17  NVVCIVIALMFLYTFVGICAGFGGGLTTMPLVTLMLP-----------VKMATPLSVIVG 65

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T+   +         + +     I    +   V    +S++   F+      F +L    
Sbjct: 66  TATALYATWLSRKETDWRSAMVLIIFSFLGIPVGLYALSYLPDHFMKVGLGGFLILYSFY 125

Query: 141 -MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M        +R +    +  + G +    S              M+ YG  + +    +
Sbjct: 126 SMFIPRLPIYDRSWIAAPIGAVAGALGAAFST---------NGPPMVIYG--MLRNLGPA 174

Query: 200 AGVSALIAFPAL-LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           A    L AF     + +  G   +G+   S+       VL  +P  IL + +   +   I
Sbjct: 175 AFRGTLNAFFTANNIAVIGGLATSGILTVSI----FKLVLFCIPTMILGSLVGQYVHKRI 230

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             K   +   +++  +  +
Sbjct: 231 SVKVFRVMVFLLLIASGSM 249


>gi|319778692|ref|YP_004129605.1| Cytochrome c-type biogenesis protein DsbD [Taylorella equigenitalis
           MCE9]
 gi|317108716|gb|ADU91462.1| Cytochrome c-type biogenesis protein DsbD [Taylorella equigenitalis
           MCE9]
          Length = 629

 Score = 35.8 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 71/219 (32%), Gaps = 27/219 (12%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG------TSLG 76
           + L+I+ +FL G L           ++P+L     ++    S  M  A G      T+  
Sbjct: 262 VGLMILGAFLLGVLLSFT-----PCVLPMLPILLSVLVGSSSRSMATAGGMPLSETTNTS 316

Query: 77  VIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLL 136
              P S+   + +    +I   IL        I   + + + + +   ++   FA+F + 
Sbjct: 317 TKKPNSLRLTLFYVFGTSIVYTIL------GVIAASIGASLSNWIQNPWVIAVFALFLVA 370

Query: 137 MGILMLKRDRLYCERKFPDN---------YVKYIWGMVTGFLSGALGVGGGIFTNLLMLF 187
             + M                            +  M+ G +S  +  G  +   L  + 
Sbjct: 371 FALSMFGVFTFQMPSSIQSKLTVLQNKLPAGSGLGAMLMGMISALI-AGPCVAAPLAGVL 429

Query: 188 YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPP 226
              S     A  A +  ++A+      I  G   + L P
Sbjct: 430 LFISQTGNIALGALILFVLAWGQGTSLIILGSSSHALLP 468


>gi|284923980|emb|CBG37079.1| putative membrane protein [Escherichia coli 042]
          Length = 291

 Score = 35.8 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 86/259 (33%), Gaps = 28/259 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
             +C++I   FL   +    G GGGL  +P+++               V M T L VI  
Sbjct: 17  SVVCIVIALMFLYTFVGICAGFGGGLTTMPLVTLMLP-----------VKMATPLSVIVG 65

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T+   +         + +     I    +   V    +S++   F+      F +L    
Sbjct: 66  TATALYATWLSRKETDWRSAMVLIIFSFLGIPVGLYALSYLPDHFMKVGLGGFLILYSFY 125

Query: 141 -MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M        +R +    +  + G +    S              M+ YG  + +    +
Sbjct: 126 SMFIPRLPIYDRNWIAAPIGAVAGALGAAFST---------NGPPMVIYG--MLRNLGPA 174

Query: 200 AGVSALIAFPAL-LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           A    L AF     + +  G   +G+   S+       VL  +P  IL + +   +   I
Sbjct: 175 AFRGTLNAFFTANNIAVIGGLATSGILTVSI----FKLVLFCIPTMILGSLVGQYVHKRI 230

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             K   +   +++  +  +
Sbjct: 231 SVKVFRVMVFLLLIASGSM 249


>gi|226304941|ref|YP_002764899.1| hypothetical protein RER_14520 [Rhodococcus erythropolis PR4]
 gi|229493069|ref|ZP_04386864.1| integral membrane protein [Rhodococcus erythropolis SK121]
 gi|226184056|dbj|BAH32160.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
           PR4]
 gi|229320099|gb|EEN85925.1| integral membrane protein [Rhodococcus erythropolis SK121]
          Length = 255

 Score = 35.8 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 75/253 (29%), Gaps = 32/253 (12%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSIC-MHVAMGTSLGVIAPTSV 83
            I++A   +G ++ + G G  L+  P L       G+      M  A+G     +    V
Sbjct: 8   FILLAGIGAGAINAVVGSGT-LITFPTLV----AFGMPPVTATMSNAVG-----LVAGGV 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG----- 138
                +RR  +     LK  I       ++ S ++ H+ +        +  +L       
Sbjct: 58  SGTWGYRRELSGQWDRLKWQIPASLAGALLGSWLLMHLPEKLFETIVPVLLVLALALVLL 117

Query: 139 ---ILMLKRDRLYCERKFPDNYVKYIWG--MVTGFLSGALGVGGGIFTNLLM-LFYGASI 192
              I    + R   E       +  +       G   G      GI    +M      ++
Sbjct: 118 QPRIQAWAKKRSTEETTLSTKRLMLLTAGTFAVGIYGGYFTAAQGILLIGVMGAILPETL 177

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
            +       +S L+   A  + I   +            +N  A  +I   S+    L  
Sbjct: 178 QRMNGAKNLLSLLVNIVAAGMYITLAFDQ----------INWAAAGLIAVGSLGGGVLGA 227

Query: 253 KLSYMIGKKYLTI 265
           +    +    L  
Sbjct: 228 RYGRRLSPTALRY 240


>gi|206563033|ref|YP_002233796.1| hypothetical protein BCAM1180 [Burkholderia cenocepacia J2315]
 gi|198039073|emb|CAR55036.1| putative membrane protein [Burkholderia cenocepacia J2315]
          Length = 255

 Score = 35.8 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 5/90 (5%)

Query: 91  RHGTINMKILKDWIFVLPITTVVTSLMISHVD---KSFLNKAFAIFCLLMGILMLKRDRL 147
           R   I+ + +      +  + V   +++  +       L     +  L  G+    R   
Sbjct: 65  RLHHIDWRAVGAATLGILPSVVAGVVLLECLSRSAADLLQLILGVVVLYGGLSAALRPTP 124

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
             ER   DN   ++ G+  G LSG  GV G
Sbjct: 125 LTERS--DNRSFFVSGIFGGLLSGMFGVSG 152


>gi|254293413|ref|YP_003059436.1| hypothetical protein Hbal_1045 [Hirschia baltica ATCC 49814]
 gi|254041944|gb|ACT58739.1| protein of unknown function DUF81 [Hirschia baltica ATCC 49814]
          Length = 310

 Score = 35.8 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 81/233 (34%), Gaps = 18/233 (7%)

Query: 4   LLYNFSLMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDD 63
           LLY F L         +     ++       T++   G GGG+V +PV +   +      
Sbjct: 24  LLYAFVLFNARLNIDTLISNWYLLFVGIFGATIANASGTGGGVVFLPVFNAMNESGQFAL 83

Query: 64  SICMHVAMGTSLGVIAPTSVMSFMEHRRHG------TINMKILKDWIFVLPITTVVTSLM 117
           S    +A    +     T          +       +I+     +   ++ +  + T L+
Sbjct: 84  SQANILAASFLIQCFGMTMGAIVWCKNLYKPNTQSISISTSDFWNSAGLILLLAIPTMLL 143

Query: 118 ISH---VDKSFLNKAFAIFCLLMGILMLK---------RDRLYCERKFPDNYVKYIWGMV 165
             +   +D  ++  AF IF + +GI ++           + L  +    D  +      +
Sbjct: 144 TQYWVFIDPFWVLFAFKIFSICLGIAVVVSTLKNANQPNNTLKTQISSQDMRILLCLAPI 203

Query: 166 TGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIYSG 218
            GF +    VG G    L +   G  I  ++  +  +S++         I++G
Sbjct: 204 GGFANALFSVGLGEIIALFLFVRGYCITTSSGLAVFISSISVLIGAPFHIFAG 256


>gi|119383314|ref|YP_914370.1| hypothetical protein Pden_0562 [Paracoccus denitrificans PD1222]
 gi|119373081|gb|ABL68674.1| protein of unknown function DUF81 [Paracoccus denitrificans PD1222]
          Length = 244

 Score = 35.8 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 54/147 (36%), Gaps = 12/147 (8%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L ++A+F  G   G   +  G + VP+L+     +          A G  L V   + +
Sbjct: 7   VLAVIAAFSIGLAKGGLSM-VGTISVPLLALVMSPVQ---------AAGILLPVYIISDI 56

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              +  RR    + ++L+  +        +      HVD + +     +  L   +  L 
Sbjct: 57  GGLIAFRR--DFDRRVLRTLVPGAITGIGLGWATAHHVDDAQVGLIVGVIGLAFALNALL 114

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLS 170
           R R+    K P       WG V+G+ S
Sbjct: 115 RSRVSASAKPPRWGAGSFWGTVSGYTS 141


>gi|196229631|ref|ZP_03128495.1| protein of unknown function DUF81 [Chthoniobacter flavus Ellin428]
 gi|196225957|gb|EDY20463.1| protein of unknown function DUF81 [Chthoniobacter flavus Ellin428]
          Length = 250

 Score = 35.8 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 60/184 (32%), Gaps = 14/184 (7%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L  +++F  G     F  G GL+ V V+++ F        +   +  G  L VIA     
Sbjct: 12  LAALSAFCIGFAKSGF-SGAGLLNVLVMAELFGPRESTGVVLPMLICGDILSVIAF---- 66

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVT-SLMISHVDKSFLNKAFAIFCLLMGI-LML 142
                  H      I+   +    I  +    +M+   D            L+M I   +
Sbjct: 67  -------HQHARWPIVWRMLPPTIIGILAGYCIMLKLTDGRIFGPIIGWIVLIMVILQAV 119

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
           +R       K P          +TG ++  L  G G    L  L      +    TSA +
Sbjct: 120 RRWYPRAFEKAPHTPQFAWSMGLTGGVTTMLANGAGPIMTLYFLATETPKFALVGTSAWM 179

Query: 203 SALI 206
             ++
Sbjct: 180 FLIL 183


>gi|83815506|ref|YP_446611.1| sensor/response regulator hybrid protein, putative [Salinibacter
           ruber DSM 13855]
 gi|83756900|gb|ABC45013.1| probable sensor/response regulator hybrid protein, putative
           [Salinibacter ruber DSM 13855]
          Length = 624

 Score = 35.8 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 44/157 (28%), Gaps = 25/157 (15%)

Query: 45  GLVMVPVLSKAFQLMGIDDSICM---HVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILK 101
           G V+V  L       G D  + M   H  +   L  +   S +S    RRH  I   +L 
Sbjct: 60  GAVLV-SLYVPLYGAGADAPVSMSWLHFGVAGLLVALIGASYISDTVRRRHVAITWGLLY 118

Query: 102 DWIFVLPITTVVTSLMISHVDKSFL-NKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKY 160
             +    +   +      +     L    F     L    M                V  
Sbjct: 119 AIMGWTAVLAALNEFAGGYAVGVLLVYAVFGGVVALGSASM--------------RPVLT 164

Query: 161 IWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATA 197
                   L+G L VGG +    ++     ++  A  
Sbjct: 165 F------LLAGLLAVGGALLWAPVLQTSPWALIGAMG 195


>gi|257069563|ref|YP_003155818.1| hypothetical protein Bfae_24370 [Brachybacterium faecium DSM 4810]
 gi|256560381|gb|ACU86228.1| predicted membrane protein [Brachybacterium faecium DSM 4810]
          Length = 355

 Score = 35.8 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 47/143 (32%), Gaps = 7/143 (4%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++   L G +  + GV GG V    L        ID    M  A    L    P  +   
Sbjct: 26  LLRGALIGVVETVPGVSGGTV---ALVTGIYDELIDAGHEMTAAARRLLT--GPDRLAGM 80

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDR 146
             H R   +   ++   +  +    +  +  +S +         A+F  L+   +L   +
Sbjct: 81  RTHLR--AVPWILVIPLLIGMAAAVLTVAGPVSRLVAQHPQTMRALFLGLVAGSVLVPVK 138

Query: 147 LYCERKFPDNYVKYIWGMVTGFL 169
           L   R      + +  G V G +
Sbjct: 139 LSGGRWRLPELLLFAAGAVAGVV 161


>gi|326774051|ref|ZP_08233333.1| integral membrane protein [Actinomyces viscosus C505]
 gi|326636190|gb|EGE37094.1| integral membrane protein [Actinomyces viscosus C505]
          Length = 257

 Score = 35.8 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 45/142 (31%), Gaps = 11/142 (7%)

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLY--- 148
            G  + ++L+  +  +       +L +         +      L++  + L + R     
Sbjct: 67  RGDADFRMLRRLVPAVLAGVGAGALFLHLASNDSTRRLIGAILLILVAITLYQRRSATRN 126

Query: 149 -----CERKFPDNYVKYIWGMVTGFLSG---ALGVGGGIFTNLLMLFYGASIYKATATSA 200
                 E   P +       +V G L+G    +   GG  T++  L     +     T+A
Sbjct: 127 RSDDVPEAAVPPSAGSRPARLVYGSLAGFTTMVANAGGPVTSMYFLACRYPVKAFLGTTA 186

Query: 201 GVSALIAFPALLVRIYSGWGLN 222
               L+    L   + +G    
Sbjct: 187 WFFFLVNLVKLPFSVSAGLVNP 208


>gi|291285289|ref|YP_003502107.1| hypothetical protein G2583_4679 [Escherichia coli O55:H7 str.
           CB9615]
 gi|290765162|gb|ADD59123.1| hypothetical protein G2583_4679 [Escherichia coli O55:H7 str.
           CB9615]
 gi|320655235|gb|EFX23181.1| hypothetical protein ECO7815_14984 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320660862|gb|EFX28308.1| hypothetical protein ECO5905_07461 [Escherichia coli O55:H7 str.
           USDA 5905]
          Length = 291

 Score = 35.8 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 87/259 (33%), Gaps = 28/259 (10%)

Query: 21  DYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAP 80
           + +C++I   FL   +    G GGGL  +P+++               V M T L VI  
Sbjct: 17  NVVCIVIALMFLYTFVGICAGFGGGLTTMPLVTLMLP-----------VKMATPLSVIVG 65

Query: 81  TSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGIL 140
           T+   +         + +     I    +   V    +S++   F+      F +L    
Sbjct: 66  TATALYATWLSRKETDWRSAMVLIIFSFLGIPVGLYALSYLPDHFMKVGLGGFLILYSFY 125

Query: 141 -MLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATS 199
            M        +R +    +  + G +    S              M+ YG  + +    +
Sbjct: 126 SMFIPRLPIYDRSWIAAPIGAVAGALGAAFST---------NGPPMVIYG--MLRNLGPA 174

Query: 200 AGVSALIAFPAL-LVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
           A    L AF     + +  G   +G+   S+       VL  +P  IL + +   +   I
Sbjct: 175 AFRGTLNAFFTANNIAVIGGLATSGILTVSI----FKLVLFCIPTMILGSLVGQYVHKRI 230

Query: 259 GKKYLTIGFSMIMFTTSFV 277
             K   +   +++  +  +
Sbjct: 231 SVKVFRVMVFLLLIASGSM 249


>gi|91787131|ref|YP_548083.1| hypothetical protein Bpro_1234 [Polaromonas sp. JS666]
 gi|91696356|gb|ABE43185.1| protein of unknown function DUF81 [Polaromonas sp. JS666]
          Length = 251

 Score = 35.8 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 87/256 (33%), Gaps = 22/256 (8%)

Query: 22  YICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPT 81
           +  + + A  + G     FG G G + VPV++          ++ +  A    + V+   
Sbjct: 11  FYVVAVPAVLMLGISKSGFGAGFGSLAVPVMAL---------AVTVPQAAAILMPVLLLM 61

Query: 82  SVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILM 141
            ++      +    + K L+  I    +  VV +L+   +D   +     +F LL     
Sbjct: 62  DLLGLAAFHK--DFDFKFLRFLIPCGLVGIVVGALLFKALDARMVAGIVGVFTLLFLAQR 119

Query: 142 LKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
           L       +   P  ++  I    +GF S     GG   +  ++    + I   TAT A 
Sbjct: 120 LL-FPPRPDSPPPPRWLGAILTATSGFTSFVAHAGGPPLSAYVIPMRLSPIKF-TATMAA 177

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
              +I     +     G              N+   L++LP++ +   +  +L+  I   
Sbjct: 178 FFFVINLSKWIPYGLLGLLDLR---------NMATSLVLLPLAPVGVWIGVRLARRISPV 228

Query: 262 YLTIGFSMIMFTTSFV 277
                  + M  T   
Sbjct: 229 LFYRLLYVGMLLTGCK 244


>gi|325264222|ref|ZP_08130954.1| putative membrane protein [Clostridium sp. D5]
 gi|324030706|gb|EGB91989.1| putative membrane protein [Clostridium sp. D5]
          Length = 262

 Score = 35.8 bits (82), Expect = 7.2,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 38/136 (27%), Gaps = 9/136 (6%)

Query: 92  HGTINMKILKDWIFVLPITTVVTSLMISHVDK--------SFLNKAFAIFCLLMGILMLK 143
              +  K             ++   M   +            +     +      +L   
Sbjct: 67  KSQLEPKTGLPLALGAAAGGILGKWMFGFISALSSDKNKIGAIQAICLLIITAATLLYTL 126

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGASIYKATATSAGV 202
                      +  V    G+V G LS  LG+GGG     ++  F+  +   A   S  +
Sbjct: 127 CRNKLNSYHITNAAVCVFIGIVLGILSSFLGIGGGPVNLAVLYFFFSMNTKAAAENSLYI 186

Query: 203 SALIAFPALLVRIYSG 218
                  +LL  I +G
Sbjct: 187 IFYSQITSLLSAILTG 202


>gi|225011458|ref|ZP_03701896.1| protein of unknown function DUF81 [Flavobacteria bacterium
           MS024-2A]
 gi|225003961|gb|EEG41933.1| protein of unknown function DUF81 [Flavobacteria bacterium
           MS024-2A]
          Length = 246

 Score = 35.8 bits (82), Expect = 7.2,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 85/267 (31%), Gaps = 28/267 (10%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMG 72
            L  + V   I L I++   +          GG      L   F       +  M     
Sbjct: 2   TLELNEVFFLILLPIISFLYASV------GHGGASGYLALMALFSF----PNEMMKQ--- 48

Query: 73  TSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAI 132
           T+L +    + ++F ++ R G  N  +   +         +       +D +   K   +
Sbjct: 49  TALLLNLIVAGIAFTQYYRAGHFNKNLFLYFAIGSIPMAFIGGQWA--LDPAIYKKILGV 106

Query: 133 FCLLMGILMLKRDRLYCERKFPDNYVKYI-WGMVTGFLSGALGVGGGIFTNLLMLFYGA- 190
           F     + ML       +       +  I  G   G  SG +G+GGGI    ++L     
Sbjct: 107 FLFFAVLRMLFSTPKSLKNPNSIKPLLAILLGAGIGLFSGLIGIGGGIILTPIILLLHYG 166

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           ++ +A A SA    + +   LL +  SG     L    +    + A++     S      
Sbjct: 167 NMKEAAAVSALFIWVNSASGLLGQWSSGIEFPPLTMLMV----VVALIGGSIGSYYG--- 219

Query: 251 ATKLSYMIGKKYLTIGFSMIMFTTSFV 277
               S     K L    + I+ T    
Sbjct: 220 ----SKRWNNKKLEYFLAFILTTAGIK 242


>gi|145349901|ref|XP_001419365.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579596|gb|ABO97658.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 316

 Score = 35.8 bits (82), Expect = 7.2,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 9/119 (7%)

Query: 157 YVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVRIY 216
           ++ +  G+V G LS   G GG I    +++ +   + +    S  +SA+ +    +  I 
Sbjct: 197 WLLFSIGVVVGMLSVLTGTGGPISFLPIVVLWKGKVNRKVMLS--MSAIQSVFLGIAAIV 254

Query: 217 SGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTS 275
           S       P   L       VL+ILP  ++   L  ++     +++LT+    I+    
Sbjct: 255 STTARGKKPDPGL-------VLLILPCGLVGVALGVRVLKYFSREWLTLFIGTILLAVG 306


>gi|124007755|ref|ZP_01692458.1| domain of unknown function, putative [Microscilla marina ATCC
           23134]
 gi|123986877|gb|EAY26649.1| domain of unknown function, putative [Microscilla marina ATCC
           23134]
          Length = 245

 Score = 35.8 bits (82), Expect = 7.2,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 60/192 (31%), Gaps = 18/192 (9%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + +++  + ++  +S +FG+ GG ++  VL+           + +  A+    GV    +
Sbjct: 6   LIVLMFTAVVASVISSVFGLAGGAILFTVLTWV---------VSIKEAIPIHSGVQLIGN 56

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
               + + R   +   I+  ++ +L     +  L   +     L      F L     +L
Sbjct: 57  TSRVLVYIR--EVRWDIVWRFVLLLVPGAYLGGLFFGYFHPLLLEFLVGAFILAT---VL 111

Query: 143 KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202
                +                  G +    G     F     +F   +      T +  
Sbjct: 112 IPKPKHQSIHLNVFIGVGFVSSFFGMIVAVTGP----FIASFFVFNNVTKEAMVGTKSVC 167

Query: 203 SALIAFPALLVR 214
            AL     ++V 
Sbjct: 168 QALTQLSKIIVF 179


>gi|326316147|ref|YP_004233819.1| hypothetical protein Acav_1330 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323372983|gb|ADX45252.1| protein of unknown function DUF81 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 254

 Score = 35.8 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 75/246 (30%), Gaps = 16/246 (6%)

Query: 37  SGLFGVGGGLVMVPVLSKAFQLMGIDD----SICMHVAMGTSLGVIAPTSVMSFMEHRRH 92
           + L GVGG + +V V       +G+            A+ T    +  +     + HR+ 
Sbjct: 7   AALAGVGGIVGIVAVTVGGGVTLGVPLLLLLGHPAATAIATVKFALIGSFATGALVHRQD 66

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
               + +      +    +V  SL+ + +D+  L     +    + + +  R  L  +  
Sbjct: 67  QRSEVAVPWLLWPLCVAGSVTGSLLATGMDERLLKFLVVVLMAGV-LWITYRTDLSAKGV 125

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYK---ATATSAGVSALIAFP 209
            P +    +       +       G            A ++    + A SA V   I   
Sbjct: 126 APGSGGARMSAGGVATVFALCVYSGFFGAGFGTFLIFALMHFFGLSFAQSASVMTRINLL 185

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSM 269
            ++    S +   G+  + LG   I  +L      +    +    +  +    +   F +
Sbjct: 186 -VVGASVSTFASKGVIDFQLG---IPLLLGCAVGGM----MGAWTAKTLSPHRMKAMFLV 237

Query: 270 IMFTTS 275
                 
Sbjct: 238 FSMLLG 243


>gi|326389954|ref|ZP_08211517.1| protein of unknown function DUF81 [Thermoanaerobacter ethanolicus
           JW 200]
 gi|325994014|gb|EGD52443.1| protein of unknown function DUF81 [Thermoanaerobacter ethanolicus
           JW 200]
          Length = 251

 Score = 35.8 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 87/263 (33%), Gaps = 29/263 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            +++VAS L+G  + + G GG L+  P L     +  +  +I   VA+ T        SV
Sbjct: 5   IVVLVASILAGATNAIAG-GGTLITFPALVWV-GVNPLSANITNTVALWTG-------SV 55

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                 +       ++L+       +  ++ + ++        N       L   I++  
Sbjct: 56  TGAWGFKERLYQTKELLRFLTLPSLLGGILGAYLLMITPYKVFNFVVPFLVLFATIILAL 115

Query: 144 RDRLY-------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA-SIYKA 195
            DR+         + K       +I   +T    G    G GI     +   G   I+ A
Sbjct: 116 NDRINKFNLKEGEDIKKKSLVFVFILQFLTSLYGGYFAAGIGILMLATLGIAGITDIHTA 175

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
                 +S  I   + LV ++SG             V     +I++    L   L  K+S
Sbjct: 176 NGIKNVLSLFINITSGLVLLFSGK------------VVWPFAIILMIGFALGGYLGAKVS 223

Query: 256 YMIGKKYLTIGFSMIMFTTSFVF 278
                K +     +     +  F
Sbjct: 224 QRFDNKKVKNFVVLWGIALAIAF 246


>gi|221487433|gb|EEE25665.1| conserved hypothetical protein [Toxoplasma gondii GT1]
          Length = 1659

 Score = 35.8 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 29/72 (40%)

Query: 147  LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
            +      P   +    G +TG  +G +G+GGG+  +  +L  G     A AT++      
Sbjct: 1522 VSPVAALPPLLLTPFIGFLTGVFAGLVGIGGGVVFSPFLLLMGNDPVSAVATASACVVFT 1581

Query: 207  AFPALLVRIYSG 218
            +    L  +  G
Sbjct: 1582 SSSTSLQFLLIG 1593


>gi|237830133|ref|XP_002364364.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
 gi|211962028|gb|EEA97223.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
 gi|221507234|gb|EEE32838.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 1659

 Score = 35.8 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 29/72 (40%)

Query: 147  LYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALI 206
            +      P   +    G +TG  +G +G+GGG+  +  +L  G     A AT++      
Sbjct: 1522 VSPVAALPPLLLTPFIGFLTGVFAGLVGIGGGVVFSPFLLLMGNDPVSAVATASACVVFT 1581

Query: 207  AFPALLVRIYSG 218
            +    L  +  G
Sbjct: 1582 SSSTSLQFLLIG 1593


>gi|187921460|ref|YP_001890492.1| hypothetical protein Bphyt_6829 [Burkholderia phytofirmans PsJN]
 gi|187719898|gb|ACD21121.1| protein of unknown function DUF81 [Burkholderia phytofirmans PsJN]
          Length = 240

 Score = 35.8 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 60/168 (35%), Gaps = 17/168 (10%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L++    L+GTLSG+ G G  ++++PVL   F            +A+          + 
Sbjct: 4   LLVLCVGLLAGTLSGVVGTGSSMMLMPVLVMLFG----PQQAVPIMAIA-----AIMGNF 54

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              +   R   I+ +    +         +    +  +    +  A  +F +     M+ 
Sbjct: 55  GKVLAWWR--EIDWRACGAYCVTAVPGAALGVRTLLALPPHAVEIALGLFFVA----MVP 108

Query: 144 RDRLYCERKFP-DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA 190
             R    R      +   + G V GFL+G + V  G  T  + + YG 
Sbjct: 109 TRRWLARRDIKFSLWQLSLIGGVVGFLTGIV-VSTGPITVPVFMSYGL 155


>gi|38234042|ref|NP_939809.1| putative cell division protein [Corynebacterium diphtheriae NCTC
           13129]
 gi|38200304|emb|CAE49989.1| Putative cell division protein [Corynebacterium diphtheriae]
          Length = 1017

 Score = 35.8 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 15/149 (10%), Positives = 44/149 (29%), Gaps = 25/149 (16%)

Query: 13  FLSKDCVVDYICLIIVASFLSGTLSGL---------------FGVGGGLVMVP-VLSKAF 56
            LS + V     ++I  +F+ G                    F +G G +++P  L    
Sbjct: 163 ALSDESVDSIGLILIALAFIVGASVWFDIAGPIGAAIAAGVHFVIGAGALILPLALVAIA 222

Query: 57  QLMGI----DDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTV 112
             + +    +      + +GTS   +   S++  +        + +  +     + +   
Sbjct: 223 IALMLGKLPEPDHQPRLVLGTS---VIAISMLGLIHLFAGDPADWQ-GRTHAGGI-VGAY 277

Query: 113 VTSLMISHVDKSFLNKAFAIFCLLMGILM 141
              ++              +  +   + +
Sbjct: 278 SGGMIARGFSVYLAIPLLVLVIIYGALRI 306


>gi|218439903|ref|YP_002378232.1| hypothetical protein PCC7424_2961 [Cyanothece sp. PCC 7424]
 gi|218172631|gb|ACK71364.1| protein of unknown function DUF81 [Cyanothece sp. PCC 7424]
          Length = 248

 Score = 35.8 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 14/154 (9%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
             + +  F++G +  + G G GL+ +P+L++                + +SL  +     
Sbjct: 5   IFVSLVIFIAGFIQSVAGFGFGLITMPILTEVLDFK-----------IASSLIALISIIT 53

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
              +          K +   I    I   +  L +  ++K+ +     I  +   I  L 
Sbjct: 54  HVAIIFSYQSFFQFKAVLRLIIASIIGIPIGFLAVDALNKTVILTLLGILVMSYVIWTLL 113

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGG 177
             +L    K       Y +G+++G LSGA  +GG
Sbjct: 114 DLKL---PKLESPKWAYGFGLLSGLLSGAYNIGG 144


>gi|78212284|ref|YP_381063.1| hypothetical protein Syncc9605_0736 [Synechococcus sp. CC9605]
 gi|78196743|gb|ABB34508.1| conserved hypothetical protein [Synechococcus sp. CC9605]
          Length = 255

 Score = 35.8 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 57/176 (32%), Gaps = 15/176 (8%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG--------TINMKILKDWIFVL 107
           F  + +   +  H A+ TS   I PT++   + H R G         I +      +   
Sbjct: 32  FAPLLLWLDLPPHQALATSSFAIVPTALAGTITHLRQGRLPTRPGLAIGLAAFGSALLFG 91

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            +  +    ++  +             L   +          +            G + G
Sbjct: 92  GLAGLAAGWILLAMQTLM------YIVLAFCVREGSEADANDDVDDSSAPQLAGVGCIAG 145

Query: 168 FLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           + +G LG+GGG+    LM       I++A   S       A  A L  ++ G G+ 
Sbjct: 146 WTAGMLGLGGGLVMVPLMSGPMSVPIHQAVRLSTVAVLCSASAASLQFLHEGRGVP 201


>gi|315427352|dbj|BAJ48962.1| hypothetical conserved protein [Candidatus Caldiarchaeum
           subterraneum]
          Length = 243

 Score = 35.8 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 76/204 (37%), Gaps = 13/204 (6%)

Query: 74  SLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIF 133
           +L  +   +V +     R      + +  ++        V  L+  +V    L +   + 
Sbjct: 46  ALAGLVFNTVSTSSSILRWRIHFSREMLWFVAGSVPMAFVGGLL--YVPDELLRRVMGV- 102

Query: 134 CLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGA-SI 192
            +L+G   +       ++ +     + + G   G L+G  G+GGG++   L++     + 
Sbjct: 103 AILVGGFTVLTATFQLKKVYLGIPARVLVGCGIGLLAGLTGIGGGVYLAPLLIMLDIANP 162

Query: 193 YKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT 252
               AT+  +  L +   +L R+        LP      V + A+ +I+  + L +    
Sbjct: 163 KTTAATTTTLILLNSLAGILARL------PRLPTLLPNPVILAAISLIILTAQLGSYTGA 216

Query: 253 KLSYMIGKKYLTIGFSMIMFTTSF 276
           KL     +K +    + ++ +   
Sbjct: 217 KL---FSQKTVRRVIASLLISIGL 237


>gi|90655637|gb|ABD96473.1| unknown [uncultured marine type-A Synechococcus GOM 5D20]
          Length = 257

 Score = 35.8 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 13/176 (7%)

Query: 56  FQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHG--------TINMKILKDWIFVL 107
           F  + +   +  H A+ TS   I PT++   + H R G         I        +   
Sbjct: 32  FAPLLLWLDLPPHQALATSSFAIVPTALAGLVSHLRSGSLPVRTSVAIGASAFGSALLFG 91

Query: 108 PITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTG 167
            +  VV   ++  +        + +    + +   +      +    +  +    G + G
Sbjct: 92  GLAGVVFGWLLLAMQT----LIYVVLAFAVRVREDEETPGEDDETNAEVGLLAGVGCIAG 147

Query: 168 FLSGALGVGGGIFTNLLML-FYGASIYKATATSAGVSALIAFPALLVRIYSGWGLN 222
           + +G LG+GGG+    LM    G  I++A   S       A  A L  ++ G G+ 
Sbjct: 148 WTAGMLGLGGGLVMVPLMNGPLGVPIHRAVRLSTVAVFCSASSASLQFLHEGRGVP 203


>gi|312222430|emb|CBY02370.1| similar to NAD(P) transhydrogenase [Leptosphaeria maculans]
          Length = 1210

 Score = 35.4 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 84/256 (32%), Gaps = 48/256 (18%)

Query: 36  LSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTI 95
           +SG+ GVGG  VM           G         A+G    ++A  +V       +    
Sbjct: 662 ISGMIGVGGLFVM---------GGGYFPETIPQ-ALGALSVLLAFVNVSGGFVISKR--- 708

Query: 96  NMKILK--------DWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL 147
            + + +         W++ +P        + +           A + +   + M     L
Sbjct: 709 MLDMFRRPTDPPEYPWLYAIPAALFGGGYIAAA-STGMAGLVQAGYLVSSILCMTSLSGL 767

Query: 148 YCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSA--- 204
             +       +  I G+ +GFL+    VG     ++L  F G +   +    AG+     
Sbjct: 768 ASQHTARRGNILGILGVFSGFLASLAAVG--FAPDVLTQFAGVA---SVGIVAGLMIGRR 822

Query: 205 --LIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLAT---------- 252
               + P  +  ++S  GL  +   S+G V   A + +  + ++   L            
Sbjct: 823 ITPTSLPQTVAALHSVVGLAAVLT-SIGSVLGHADVEMSTVHMVSAYLGVLIGGVTFTGS 881

Query: 253 -----KLSYMIGKKYL 263
                KL+  I  K L
Sbjct: 882 IVAFLKLAAKISTKPL 897


>gi|126729135|ref|ZP_01744949.1| hypothetical protein SSE37_23084 [Sagittula stellata E-37]
 gi|126710125|gb|EBA09177.1| hypothetical protein SSE37_23084 [Sagittula stellata E-37]
          Length = 269

 Score = 35.4 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 80/249 (32%), Gaps = 25/249 (10%)

Query: 25  LIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           L++VA+ + G   G        + VP+LS     +          A  T L V   T  +
Sbjct: 25  LLLVAALIVGFSKGGL-ASAAAIAVPMLSLFMNPV---------TAAATLLPVFVATDWI 74

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML-- 142
               +R+    + + +   +  + +   + +++  +  +  L     +  L         
Sbjct: 75  GVWLYRK--DYSRRNVAILVPSILLGVAIATVITPYTPERALLIFTGLIGLWYIARTWGR 132

Query: 143 -KRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAG 201
             R +   E    D      WG +TG ++  +   G       +L       +   T   
Sbjct: 133 ALRQKETPEPTSADVAPGVFWGTITG-IASFITHSGAPPVQAFLLPQRLPKLEFAGT-VA 190

Query: 202 VSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKK 261
           +S  I     LV++ + W +        G V       +    ++ T     L+  + ++
Sbjct: 191 ISFAI---GNLVKLPAYWSIGQFEGLRWGLV-----AALCVTGMIGTYGGRWLTAHLPER 242

Query: 262 YLTIGFSMI 270
              I   + 
Sbjct: 243 TYRIVIEIF 251


>gi|163740183|ref|ZP_02147577.1| hypothetical protein RG210_08787 [Phaeobacter gallaeciensis 2.10]
 gi|161386041|gb|EDQ10416.1| hypothetical protein RG210_08787 [Phaeobacter gallaeciensis 2.10]
          Length = 284

 Score = 35.4 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 90/272 (33%), Gaps = 30/272 (11%)

Query: 10  LMVFLSKDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHV 69
           +M+FL  + +  ++      + L+G + G+ G    +++V  LS           I +  
Sbjct: 29  VMLFLPAELISVHLLAAFAIAALAGAVKGMVGFAMPMILVSGLSLFL-----PPDIALA- 82

Query: 70  AMGTSLGVIAPT-SVMSFMEHRRHGTINMKILKDWIFVLPITTVV---TSLMISHVDKSF 125
                 G+I PT         R+ G    + +K +   L I  V    ++ ++  + +  
Sbjct: 83  ------GLILPTLVTNGMQALRQGGQAAWQSMKRFRIFLLIGLVFLLASAQLVRVLPQDI 136

Query: 126 LNKAFAIFCLLMGILMLKRDRLYCERKFPD-NYVKYIWGMVTGFLSGALGVGGGIFTNLL 184
           +         L  +L L    +   R  P    +   +    G  SG  G      T   
Sbjct: 137 MLILIGAPITLFAVLQLFGIAIPISRATPRVEAIVAAFAGFIGGFSGIWGP----PTVAY 192

Query: 185 MLFYGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPIS 244
           +   G    +       +  L A   L+  I SG       P+SL         +++P +
Sbjct: 193 LTALGTEKREQMRVQGVIYGLGAVALLIAHIGSGVMRADTAPFSL---------LLIPPA 243

Query: 245 ILITPLATKLSYMIGKKYLTIGFSMIMFTTSF 276
           I    +  +L   I +        +++     
Sbjct: 244 IFGMWIGGRLQDRINQVTFRRATLVVLLVAGA 275


>gi|296283906|ref|ZP_06861904.1| hypothetical protein CbatJ_09796 [Citromicrobium bathyomarinum
           JL354]
          Length = 217

 Score = 35.4 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 47/116 (40%), Gaps = 4/116 (3%)

Query: 156 NYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKAT-ATSAGVSALIAFPALLVR 214
                +     G+L+G +G+GGGIF   L+     +  +A  AT++    + +   L+ +
Sbjct: 96  KRAMLLAAAPLGYLAGLVGIGGGIFLAPLLHLVRWNGPRAIAATASLFILVNSLFGLVGQ 155

Query: 215 IYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMI 270
           +            S G   +  ++ ++    + +  A +L      ++LT   ++ 
Sbjct: 156 LSKNGADMLGAAASTG---LPLMIAVVIGGQIGSLFAVRLFKPQLIRWLTAALTLF 208


>gi|254429919|ref|ZP_05043626.1| conserved domain protein, putative [Alcanivorax sp. DG881]
 gi|196196088|gb|EDX91047.1| conserved domain protein, putative [Alcanivorax sp. DG881]
          Length = 255

 Score = 35.4 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 26/226 (11%), Positives = 72/226 (31%), Gaps = 35/226 (15%)

Query: 69  VAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNK 128
           +A GT    +   S  +  +  + GT+    L   +    + T+V ++  + + ++ L  
Sbjct: 47  LANGTMRVAVLIQSAEAVRQFNKRGTMPFAALPAILVPSLLGTLVGAVAAAFLPETILKP 106

Query: 129 AFAIFCLLMGILMLKRD----------RLYCERKFPDNYVKYIWGMVTGFLSGALGVGGG 178
                 +++ +LM+ R            L            ++ G   GF+   +G    
Sbjct: 107 VLLTTLVVVALLMVLRPAQVSPGPDAIPLSPNASLSGWLGLFLAGAYGGFVQAGVGF--- 163

Query: 179 IFTNLLMLFYGASIYKATA-----TSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVN 233
           +   +L+      + ++ A     T +     +       ++                  
Sbjct: 164 VLLAVLVGQLQYDLLRSNALKLAITGSFTVLALGIFVARDQVA----------------W 207

Query: 234 IGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279
           +  ++ +   S+L   L    ++ +  + L     +++       A
Sbjct: 208 LPGLV-VALGSLLGVRLGVGFAHKVSPRVLKRILLVMVLAVCLAAA 252


>gi|229494120|ref|ZP_04387883.1| putative membrane protein [Rhodococcus erythropolis SK121]
 gi|229318482|gb|EEN84340.1| putative membrane protein [Rhodococcus erythropolis SK121]
          Length = 1444

 Score = 35.4 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 48/165 (29%), Gaps = 30/165 (18%)

Query: 106  VLPITTVVTSLMISHVDKSFLNK-AFAIFCLLMGILM--LKRDRLYCERKFPDNYVKYIW 162
             +       ++ I      +     F    LL+ +L   L   R   +   P    + + 
Sbjct: 1265 WIVPAGTAGTVTIDFPSDRWYRLGIFGGLVLLIPLLFAALVPTRREPKSLTPPRPWRSVA 1324

Query: 163  GMVTGFLSGALGVGGG----------IFTNLLMLFYGASIYKA---TATSAGVSALIAFP 209
                G L+ A  +GGG          I     + F+G     A     T+          
Sbjct: 1325 AGCVGVLAAATVIGGGVGAAIAVVCSILGLAALRFFG-PARTARILVGTA-------GVA 1376

Query: 210  ALLVRIYSGWGLNGLPPWSLG------FVNIGAVLIILPISILIT 248
            A++       G    P   +G      F  + A+++    ++   
Sbjct: 1377 AMIGITLLSTGPWRAPGGYVGDSFAIQFSMLVALVVTGLAALPFA 1421


>gi|158522901|ref|YP_001530771.1| hypothetical protein Dole_2891 [Desulfococcus oleovorans Hxd3]
 gi|158511727|gb|ABW68694.1| protein of unknown function DUF81 [Desulfococcus oleovorans Hxd3]
          Length = 299

 Score = 35.4 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 8/110 (7%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           V +F+    + + GV G  +++P             S        T+             
Sbjct: 17  VTAFVISFFTSMGGVSGAFLLLPFQVSVLGYTSPSVS-------ATNQLFNIVAIPSGVW 69

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLM-ISHVDKSFLNKAFAIFCLL 136
            + + G +   +    IF      ++ +++ ++ +      K FA   LL
Sbjct: 70  RYWKEGRMVWPLTWIVIFGTLPGVLIGAVVRVAWLPDPRHFKLFAAGVLL 119


>gi|109897270|ref|YP_660525.1| hypothetical protein Patl_0945 [Pseudoalteromonas atlantica T6c]
 gi|109699551|gb|ABG39471.1| protein of unknown function DUF81 [Pseudoalteromonas atlantica T6c]
          Length = 264

 Score = 35.4 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 76/249 (30%), Gaps = 37/249 (14%)

Query: 47  VMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFV 106
           + VP L+    L           A+ +S+ ++   S +  ++  R+  +++ IL  +  V
Sbjct: 26  LTVPALTLFLGLDE-------KSAITSSMLIVGLISAVGGIKAYRNRQLDLSILVSFGIV 78

Query: 107 LPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRD-----------------RLYC 149
                 V + +   + +            +    M                         
Sbjct: 79  SLPFAAVGARLGIWLPQGSQTLLLVAIMCIAAYKMFAGTVRAGSDNSSSSHTASMATSVS 138

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFP 209
                   +      V          GG +    L+ F G ++ KA A S  +  + AF 
Sbjct: 139 APPPSKRNLLIAAASVGLITGVVGVGGGFLIVPALVFFTGVNMQKAVANSLVLIVINAFT 198

Query: 210 ALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISI--LITPLATKLSYMIGKKYLTIGF 267
           A       G G           V +  ++II   SI  +       +S  + ++ L  GF
Sbjct: 199 AFTTIAAGGHG-----------VELNGIIIITMASIGSICVLAGQSISSHLDQRILKRGF 247

Query: 268 SMIMFTTSF 276
           S ++   + 
Sbjct: 248 STLIVLVAI 256


>gi|154244622|ref|YP_001415580.1| hypothetical protein Xaut_0671 [Xanthobacter autotrophicus Py2]
 gi|154158707|gb|ABS65923.1| hypothetical protein Xaut_0671 [Xanthobacter autotrophicus Py2]
          Length = 211

 Score = 35.4 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 6/72 (8%), Positives = 24/72 (33%)

Query: 94  TINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKF 153
             +  I+ D +        + +   + +    L++  A+  + +  ++L       +   
Sbjct: 84  AAHWPIILDLLAGSVAGAWIGAGWATRLKSQTLHRVIAVLLVAIAGVLLLWHDTAAQEPL 143

Query: 154 PDNYVKYIWGMV 165
              + + + G  
Sbjct: 144 LHGWAQMVAGAG 155


>gi|227824563|ref|ZP_03989395.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226905062|gb|EEH90980.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 244

 Score = 35.4 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 2/87 (2%)

Query: 90  RRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
             H  +++KI     F + +  +  +  +   D + +        + + + ML + +   
Sbjct: 62  HDHKALSVKIWGSGAFFMILGIIPGTFFLKAGDPALIKIILGFLTMGLALQMLLKKKSAG 121

Query: 150 ERKFPDNYVKYIWGMVTGFLSGALGVG 176
                      +  ++ GF+SG LG+G
Sbjct: 122 GAG--SALSHALIAILAGFISGLLGIG 146


>gi|289704606|ref|ZP_06501037.1| putative membrane protein [Micrococcus luteus SK58]
 gi|289558670|gb|EFD51930.1| putative membrane protein [Micrococcus luteus SK58]
          Length = 281

 Score = 35.4 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 90/263 (34%), Gaps = 39/263 (14%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           + L+++A F +GT++ + G G  LV  P L       G         A  ++   +  + 
Sbjct: 17  VLLVLLAGFWAGTINSVIGSGT-LVTFPTLVAV----GFPPVT----AQVSNAMGLVASG 67

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMG---- 138
                 +RR    +  +L        +  V+ + +++ +  +       +  ++      
Sbjct: 68  FSGTYGYRRELAQSRALLPKLTVASLLGGVIGAALLTTLPPAVFGYVAPVLLVVALTVVV 127

Query: 139 ----ILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGAL---GVGGGIFT----NLLMLF 187
               I    R R   +   P        G VT  L   +   G+ GG F      +LM  
Sbjct: 128 LQPRIQRWVRRRAEDQGPTPGADSPVPVGPVTPTLWTLVFLTGIYGGYFVAAQGVMLMAI 187

Query: 188 YGA-----SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILP 242
           +G      ++  A A    +S ++   A    +   +            ++  AVL+I  
Sbjct: 188 FGVLLVGGTLVHANAVKTWLSLVVNLTAAAFYLLFAFDR----------IDWRAVLLIAL 237

Query: 243 ISILITPLATKLSYMIGKKYLTI 265
            S++   +  ++   I    L +
Sbjct: 238 SSLVGGLVGARIGRRISPTALRV 260


>gi|257865563|ref|ZP_05645216.1| V-type ATPase [Enterococcus casseliflavus EC30]
 gi|257871900|ref|ZP_05651553.1| V-type ATPase [Enterococcus casseliflavus EC10]
 gi|257799497|gb|EEV28549.1| V-type ATPase [Enterococcus casseliflavus EC30]
 gi|257806064|gb|EEV34886.1| V-type ATPase [Enterococcus casseliflavus EC10]
          Length = 653

 Score = 35.4 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 43/154 (27%), Gaps = 17/154 (11%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P     F +M  D      +A+ T++G+ A           +   I        +  +
Sbjct: 364 MTPFYYVFFGMMVADLGYGALMAVATTIGLHALRLPKGTKRFLKLFQIL------SVPTM 417

Query: 108 PITTVVTSLMISHVDKSFLN------KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI 161
               +  S   + +    L+        F +  +  GI +     L  +       +   
Sbjct: 418 IWGAIYGSFFGATLPFQLLSPSEDFMAIFGLSMIFGGIQLFTGLYLAAKENIRKKDLLGA 477

Query: 162 W--GMV-TGFLSGALGVGGGIFT--NLLMLFYGA 190
              G    G LSG L    G        +   G 
Sbjct: 478 VNEGFAWLGLLSGLLVAAAGNLLIDVPALTTVGL 511


>gi|242280982|ref|YP_002993111.1| hypothetical protein Desal_3526 [Desulfovibrio salexigens DSM 2638]
 gi|242123876|gb|ACS81572.1| protein of unknown function DUF81 [Desulfovibrio salexigens DSM
           2638]
          Length = 244

 Score = 35.4 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 53/151 (35%), Gaps = 17/151 (11%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+ +   + G +SG+ G+GG +V VP  +    +  +         +   L VI   S+
Sbjct: 7   TLVFLLWLIGGFVSGVSGIGGAMVAVPAAAMFIPMQELVP-------LACLLNVIMDGSI 59

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
            +              LK  +            +++ V  S L  A     +     +  
Sbjct: 60  AAMHFRHCR----WPALKPLLVGSVPGAFAGLYILTFVSSSILQGAVGALLIY---YVYW 112

Query: 144 RDRLYCERKFPDNYVKYIWGMVTGFLSGALG 174
           +     E+  P+++ +   G   GF +  LG
Sbjct: 113 QLTFKVEKTHPESWSR---GSAAGFGASLLG 140


>gi|148358760|ref|YP_001249967.1| sensor protein PilS [Legionella pneumophila str. Corby]
 gi|296106805|ref|YP_003618505.1| two-component system sensor kinase PilS [Legionella pneumophila
           2300/99 Alcoy]
 gi|148280533|gb|ABQ54621.1| sensor protein PilS [Legionella pneumophila str. Corby]
 gi|295648706|gb|ADG24553.1| two-component system sensor kinase PilS [Legionella pneumophila
           2300/99 Alcoy]
          Length = 528

 Score = 35.4 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 54/172 (31%), Gaps = 19/172 (11%)

Query: 97  MKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL-LMGILMLKRDRLYCERKFPD 155
             I +     L +     S +  +    FL  AFA     L+ +    R  L  +++   
Sbjct: 21  YNIYRIVSIFLFLGIYYFSYINKYYPLLFLCIAFAYLVFALIFLYFWHRKILSFDKQV-- 78

Query: 156 NYVKYIWGMV-TGFLSGALGVGG------GIFTNLLMLFYG--ASIYKATATSAGVSALI 206
               ++ G +    +S  LG+ G      GI  N+ +           A   ++  S L+
Sbjct: 79  ----FLSGTIDIIAISSMLGIIGNLESGYGILLNVTIAALSILVPGRLAIYFASLASCLL 134

Query: 207 AFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMI 258
               +L      +    L  +    +           +  ++    ++S  +
Sbjct: 135 LCGNVLQFFI--YHQKDLSTFFYSGIYGAGFFATAITAWYLSNW-VRMSESL 183


>gi|75762474|ref|ZP_00742338.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
          serovar israelensis ATCC 35646]
 gi|74490047|gb|EAO53399.1| Hypothetical membrane spanning protein [Bacillus thuringiensis
          serovar israelensis ATCC 35646]
          Length = 59

 Score = 35.4 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 19/35 (54%)

Query: 64 SICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98
           +   +A+GTS+  +  T + S + + +H  ++ K
Sbjct: 5  GLSPQLAVGTSMVTVVFTGLSSTLTYMKHKRVDYK 39


>gi|332143202|ref|YP_004428940.1| hypothetical protein MADE_1019100 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327553224|gb|AEA99942.1| hypothetical protein MADE_1019100 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 256

 Score = 35.4 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 62/185 (33%), Gaps = 16/185 (8%)

Query: 93  GTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERK 152
             I+ ++LK +         + S ++  +    +  A A+F L +        +   +  
Sbjct: 78  KHIDWRMLKYFSLGAIAGAFLASFIVIQLPLVVIQFAVAVFILFLVW----GSKPKAQEM 133

Query: 153 FPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALL 212
            P    + + G+VT  +S  +G  G       +     S  + T T A    L       
Sbjct: 134 RP--AGRTLAGLVTTLVSMFVGATG-PLVAAFVHRNNYSKMQITGTLASCMTLQHGLKAF 190

Query: 213 VRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMF 272
           V  + G+               G V+ ++    L T L  K+   +  +   + F +++ 
Sbjct: 191 VFTFVGFSFAQ---------WAGLVIAMIVSGALGTFLGLKVLKRVPAEKFMLTFKIVVT 241

Query: 273 TTSFV 277
             +  
Sbjct: 242 LLALR 246


>gi|86137232|ref|ZP_01055810.1| hypothetical protein MED193_16197 [Roseobacter sp. MED193]
 gi|85826556|gb|EAQ46753.1| hypothetical protein MED193_16197 [Roseobacter sp. MED193]
          Length = 239

 Score = 35.4 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 61/184 (33%), Gaps = 12/184 (6%)

Query: 35  TLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGT 94
            ++G  G G  LV       A     +   I +   +G  +GV+  +             
Sbjct: 12  FINGFAGFGTALVASGFWFLALPAHIVPPLIIISALVGQLIGVLKLSV-----------E 60

Query: 95  INMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYCERKFP 154
           +N +     +    +   + + +++ ++ + +      F ++  +L             P
Sbjct: 61  LNWRKSSYLLSGGILGVPIGAAILTQMEPTLVKTIIGGFLVVYTLLQFAGWPRPAATASP 120

Query: 155 DNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLVR 214
           +       G  +G L G  G+  G+   + +   G S  +  A     + L+   A +  
Sbjct: 121 EGVADRAVGFASGVLGGFAGL-SGVLPLVWLQLRGFSARQQRARYQPFNLLVLAFASVAM 179

Query: 215 IYSG 218
           +  G
Sbjct: 180 LVIG 183


>gi|149173388|ref|ZP_01852018.1| thiol:disulfide interchange protein dsbD (precursor) [Planctomyces
           maris DSM 8797]
 gi|148847570|gb|EDL61903.1| thiol:disulfide interchange protein dsbD (precursor) [Planctomyces
           maris DSM 8797]
          Length = 779

 Score = 35.4 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 57/149 (38%), Gaps = 8/149 (5%)

Query: 27  IVASFLSGTLSGLFGVG-GGLVMVPVLSK-AFQLMGIDDSICMHVAMGTSLGVIAPTSVM 84
           +  +FL+G L+ L      G  + PVL+    Q  GI   + + + +G +   I  +   
Sbjct: 488 LTGAFLTGILATLLATPCSGPFLGPVLAWSVMQTPGITYLVWLVMGLGMASPYIIFSVFP 547

Query: 85  SFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSF-LNKAFAIFCLLMGILM-- 141
             + +     + M   K++  ++ +  V+   +IS +D+S  +     +  +  G+ M  
Sbjct: 548 KAINYLPKPGMWMVRFKEFSGIILMGAVI--FIISFLDESLTIPVLIILLGITTGLWMIG 605

Query: 142 -LKRDRLYCERKFPDNYVKYIWGMVTGFL 169
            L       ++K           +  G  
Sbjct: 606 SLYTHNSSIQKKMTVRVAALALTVGIGLF 634


>gi|119962933|ref|YP_947870.1| integral membrane protein [Arthrobacter aurescens TC1]
 gi|119949792|gb|ABM08703.1| putative integral membrane protein [Arthrobacter aurescens TC1]
          Length = 261

 Score = 35.4 bits (81), Expect = 9.0,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 92/270 (34%), Gaps = 33/270 (12%)

Query: 24  CLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSV 83
            L+  A   +GT++ + G G  LV  PVL            +   VA  ++   +   + 
Sbjct: 7   ILVFFAGLWAGTINAVVGSGT-LVTFPVLIAL--------GVTPVVASMSNAMGLVAGTA 57

Query: 84  MSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLK 143
                +RR      + L   +    +  +  + ++ H+ +   +    +  +L  +++L 
Sbjct: 58  AGAWGYRRELAGRGRQLMKLLPASLLGGITGAWLLLHLPEKVFHYVAPVLLVLALLMVLF 117

Query: 144 RDRLY------------CERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLM-LFYGA 190
           + +L               R      +  +   + G   G      GI    ++ +F   
Sbjct: 118 QPKLQAWIRSREQNPEHAIRDRSHGILLVVLVYLAGVYGGYFVAAQGILLVGILGVFLTG 177

Query: 191 SIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPL 250
           ++  A A    +   +   A +  +   +            +N   VL+I   S +   +
Sbjct: 178 TMQNANAMKNILVLGVNMVAAISYLIFAFDR----------INWLVVLLIAVSSTIGGLV 227

Query: 251 ATKLSYMIGKKYLT-IGFSMIMFTTSFVFA 279
             K+   +  + L  + F++ +    F+ A
Sbjct: 228 GAKVGRKLSPRVLRAVIFTLGIVALGFMIA 257


>gi|325569367|ref|ZP_08145523.1| V-type ATP synthase, subunit I [Enterococcus casseliflavus ATCC
           12755]
 gi|325157367|gb|EGC69528.1| V-type ATP synthase, subunit I [Enterococcus casseliflavus ATCC
           12755]
          Length = 653

 Score = 35.4 bits (81), Expect = 9.3,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 43/154 (27%), Gaps = 17/154 (11%)

Query: 48  MVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVL 107
           M P     F +M  D      +A+ T++G+ A           +   I        +  +
Sbjct: 364 MTPFYYVFFGMMVADLGYGALMAVATTIGLHALRLPKGTKRFLKLFQIL------SVPTM 417

Query: 108 PITTVVTSLMISHVDKSFLN------KAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYI 161
               +  S   + +    L+        F +  +  GI +     L  +       +   
Sbjct: 418 IWGAIYGSFFGATLPFQLLSPSEDFMAIFGLSMIFGGIQLFTGLYLAAKENIRKKDLLGA 477

Query: 162 W--GMV-TGFLSGALGVGGGIFT--NLLMLFYGA 190
              G    G LSG L    G        +   G 
Sbjct: 478 VNEGFAWLGLLSGLLVAAAGNLLIDVPALTTVGL 511


>gi|328952297|ref|YP_004369631.1| protein of unknown function DUF81 [Desulfobacca acetoxidans DSM
           11109]
 gi|328452621|gb|AEB08450.1| protein of unknown function DUF81 [Desulfobacca acetoxidans DSM
           11109]
          Length = 316

 Score = 35.4 bits (81), Expect = 9.4,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 36/128 (28%), Gaps = 8/128 (6%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
            + + +    + + GV G  +++P             S        T+L           
Sbjct: 16  FLVALVVSFFTSMGGVSGAFLLLPFQVSVLGFTSPAVSP-------TNLVFNVVAIPSGV 68

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLM-ISHVDKSFLNKAFAIFCLLMGILMLKRD 145
             + R G +   +    I        + + + I ++      K FA   LL   L L  D
Sbjct: 69  YRYIREGRMAWPLTWVVIAATLPGVFIGAFLRIQYLPDPKAFKLFAGCVLLYIGLRLMND 128

Query: 146 RLYCERKF 153
                   
Sbjct: 129 LWRPRPSM 136


>gi|271966710|ref|YP_003340906.1| hypothetical protein Sros_5401 [Streptosporangium roseum DSM 43021]
 gi|270509885|gb|ACZ88163.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 252

 Score = 35.4 bits (81), Expect = 9.5,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 81/240 (33%), Gaps = 28/240 (11%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I L++VA+  +G +  + G GGGL+ +PVL  A         +    A+ T+       +
Sbjct: 4   IVLLLVAAAGAGWIDAVVG-GGGLLQLPVLLMA--------GLSPVQALATNKFAAIFGT 54

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
             + + + R   I+  +         +   + +   + + +  L     +  + + + + 
Sbjct: 55  ASAAVTYARTTKIDTGVAVPAGLGAVVFAGLGASAAAAISREALIPLVMVTLVGVALFVT 114

Query: 143 KR------DRLYCERKFPDNYVKYIWGMVTGFLSGALGVG-GGIFTNLLMLFYGASIYKA 195
            R       + +   +        + G    F  G LG G G           G      
Sbjct: 115 FRPAFGTHPQPHLRTRARTVAAIAVAGAGIAFYDGILGPGTGTFLIIAFTTILGMDFVSG 174

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLS 255
           +A S  +++     ALLV  Y             G V     L +   +I    L  +++
Sbjct: 175 SAHSKIINSCTNLGALLVFAYQ------------GHVLWLLGLAMAVCNIAGAQLGARMA 222


>gi|330884179|gb|EGH18328.1| hypothetical protein Pgy4_35783 [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 78

 Score = 35.4 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 12/87 (13%)

Query: 43  GGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKD 102
           GGG +M P+L       GI+ +     A+GT L   A T     + HR++  I+ K+   
Sbjct: 1   GGGSLMTPILLW----FGINPAT----AVGTDLLYAAITKSGGVLVHRKNDNIDWKV--- 49

Query: 103 WIFVLPITTVVTSLMISHVDKSFLNKA 129
              +L + +V   L+   V        
Sbjct: 50  -TGLLTLGSVPAVLLTLWVPGDTFEAL 75


>gi|229551556|ref|ZP_04440281.1| integral membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|229315086|gb|EEN81059.1| integral membrane protein [Lactobacillus rhamnosus LMS2-1]
          Length = 275

 Score = 35.4 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 39/115 (33%), Gaps = 7/115 (6%)

Query: 28  VASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFM 87
           +  F++G  +G FG   G+VM+  L+       I  +   ++   T     A  +V+   
Sbjct: 163 IVIFVTGAYAGYFGASAGVVMLATLTLTVDQPFIVSNSMKNL---TGFAANAIATVIYAF 219

Query: 88  EHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILML 142
                  I   ++      L I   +  ++   +    L    A    L+   + 
Sbjct: 220 T----TKIEWLMVIPLGIGLFIGGYIGPIIARRLPVQLLRFIIAALTFLLAAKLF 270


>gi|299821250|ref|ZP_07053138.1| conserved hypothetical protein [Listeria grayi DSM 20601]
 gi|299816915|gb|EFI84151.1| conserved hypothetical protein [Listeria grayi DSM 20601]
          Length = 136

 Score = 35.4 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 39/112 (34%), Gaps = 10/112 (8%)

Query: 152 KFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFY-GASIYKATATSAGVSALIAFPA 210
               +      G + G L+  LG+GGG     L++F     I  A   S        F  
Sbjct: 11  HLKSSGWVLAVGFLLGGLASFLGIGGGPINVALLMFCFRLPIKAAAVYSIITIFFSQFSK 70

Query: 211 LLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKY 262
           L     S     G   + L +     + +I+P +I       KLS +  +K 
Sbjct: 71  LAGIAIS----EGFASFDLSY-----LAVIIPAAICGGYFGAKLSGIWSEKK 113


>gi|226329459|ref|ZP_03804977.1| hypothetical protein PROPEN_03364 [Proteus penneri ATCC 35198]
 gi|225202645|gb|EEG84999.1| hypothetical protein PROPEN_03364 [Proteus penneri ATCC 35198]
          Length = 127

 Score = 35.4 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 41/98 (41%), Gaps = 7/98 (7%)

Query: 27  IVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSF 86
           ++     G +    GVGGG++++PVL   F +  +        A+ T+  +     + S 
Sbjct: 7   LLIGAAIGLVITTTGVGGGVILLPVLIYLFGMNALA-------AVATANLLSMLMKLSSS 59

Query: 87  MEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKS 124
             H R G I +K     + ++   T + S  ++ +   
Sbjct: 60  YIHFRLGNIPLKPALLILAIMFPATFLASYGVTWLGSQ 97


>gi|156720291|dbj|BAF76798.1| urea transporter [Trachemys scripta elegans]
          Length = 403

 Score = 35.4 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 79/270 (29%), Gaps = 27/270 (10%)

Query: 16  KDCVVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSL 75
              VV  +  +I++   S   +GLFG  G  V+V +L   F   G      +   + TS+
Sbjct: 103 SGTVVSTLTALILSQDRSAIAAGLFGYNG--VLVGLLMAVFSDKGDYYWWLLLPVVVTSM 160

Query: 76  GVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCL 135
                +S +              + + W   +       ++ +        N  F    +
Sbjct: 161 ACPVLSSALGS------------VFRKWDLPVFTLPFNIAVSLYLAATGHYNLFFPTTLI 208

Query: 136 LMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKA 195
                +        E       +    G V G  +     GG     LL+      ++ A
Sbjct: 209 QPVTSVPNITWSEIEVPLLLQSIPVGIGQVYGCDNPW--TGGIFLVALLISSPLICLHAA 266

Query: 196 TATSAGVSALIAFPALLVRIYSGWGLNGLPPWSL---GFVNIGAV---LIILPISILITP 249
             ++ G+ A +       R+Y G          +   G          L+ +  +     
Sbjct: 267 IGSAVGMLAALTIAMPFDRLYFGLASYNCVLACIAIGGMFYAPTWQTHLLAVACAFFGAY 326

Query: 250 LATKLSYMIGKKYL-----TIGFSMIMFTT 274
           L   L+  +    L        FS  +F  
Sbjct: 327 LGAALANSLSVFGLPACTWPFCFSAFLFLL 356


>gi|145588547|ref|YP_001155144.1| hypothetical protein Pnuc_0360 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145046953|gb|ABP33580.1| protein of unknown function DUF81 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 254

 Score = 35.4 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 7/112 (6%)

Query: 38  GLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINM 97
           GL G GGG++ VP+L  A  L        +  A   SL  IA  + +  +   ++  +  
Sbjct: 2   GLTGAGGGILSVPLLVFALHL-------TVAEAAPISLLAIALAAGVGALLGFKNKILRY 54

Query: 98  KILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRLYC 149
           K          + + +   +   +  + L   F+     + I +  +     
Sbjct: 55  KAAGFMAIFGLLLSPLGLWLAQRIPNAPLLILFSGILFYVSIRLYLQAHRKI 106


>gi|163785638|ref|ZP_02180184.1| Predicted permease [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879094|gb|EDP73052.1| Predicted permease [Hydrogenivirga sp. 128-5-R1-1]
          Length = 229

 Score = 35.4 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 70/190 (36%), Gaps = 34/190 (17%)

Query: 23  ICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTS 82
           I  II+   + G LSGL G+GGG+++ P L K          +   V +GTS+  +   +
Sbjct: 48  IFYIILLGLVVGFLSGLMGIGGGIILNPALIKL--------GVPPIVTVGTSVAQMVGAT 99

Query: 83  VMSFMEHRRHGTINMKILKDWIFVLPITTVVTSLMISHVDK-----SFLNKAFAIFCLLM 137
           V  F+ H R   I++K+    +        V   +   ++      +F+   +  +    
Sbjct: 100 VSGFLAHLRLKNIDLKMGWVMVLSGFAGGSVGVFLSKILEDAGYFRTFVLSLYTFYLGFT 159

Query: 138 GILMLKRD---------------------RLYCERKFPDNYVKYIWGMVTGFLSGALGVG 176
           GI M                         ++  +       V    G   GFL+  +GVG
Sbjct: 160 GITMFLDVLRKEKKEKKSKLKYFIDNLPFKMKFQFTEVSVLVPVGIGAFAGFLAAVMGVG 219

Query: 177 GGIFTNLLML 186
           GG      ++
Sbjct: 220 GGFVIIPALI 229


>gi|88807711|ref|ZP_01123223.1| hypothetical protein WH7805_14208 [Synechococcus sp. WH 7805]
 gi|88788925|gb|EAR20080.1| hypothetical protein WH7805_14208 [Synechococcus sp. WH 7805]
          Length = 259

 Score = 35.4 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 64/173 (36%), Gaps = 7/173 (4%)

Query: 55  AFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMKILKDWIFVLPITTVVT 114
               MG+      H A+ TS   I PT++     H R  ++ +K           T ++ 
Sbjct: 37  LLLWMGLTP----HQALATSTFAIVPTAIGGSFTHWRSRSLPLKAAFVIGLTAFATALIF 92

Query: 115 SLMISHVDKSFLNKAFAIFCLLM--GILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGA 172
           S +   V    L    A+  L++   I   +      + + P  +     G V G   G 
Sbjct: 93  SRLGGLVAGWHLLALQALLYLVLAGSIRADRETAPQTDGQRPSPWGLSAVGAVAGLSGGL 152

Query: 173 LGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGL 224
           LG+GGG+    LM+      I +A   S    A  A  A L  +  G GL  +
Sbjct: 153 LGLGGGLLMVPLMVSGLSMPIRQAIRLSTLAVACSASAASLQFLQEGRGLASM 205


>gi|154151059|ref|YP_001404677.1| signal transduction histidine kinase [Candidatus Methanoregula
           boonei 6A8]
 gi|153999611|gb|ABS56034.1| signal transduction histidine kinase [Methanoregula boonei 6A8]
          Length = 1205

 Score = 35.4 bits (81), Expect = 9.9,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 68/180 (37%), Gaps = 15/180 (8%)

Query: 104 IFVLPITTVVTSLMISHVDKS------FLNKAF--AIFCLLMGILMLKRDRLYCERKFPD 155
           + VL +  +   ++ +++  S        N +F       L+GIL+     +  +R    
Sbjct: 77  MLVLGLGAIAAGII-NYLPDSMNANITVQNTSFCAGALLQLIGILIALSGTVPQQRSDDG 135

Query: 156 NYVKYIWGM--VTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGVSALIAFPALLV 213
                ++G   +  F      V G +     +   G +  +    ++ V        +L+
Sbjct: 136 LKCTLLYGGSGIIVFFFSLAAVTG-VIPPFFIPGVGFTPLREVLIASAVEFFALAAGILL 194

Query: 214 RIYSGWGLNGLPPWSLGFVNIG-AVLIILPISILITPLA--TKLSYMIGKKYLTIGFSMI 270
            +Y     +    +S+G   IG  ++ +   S+L +PL    + +  +G  Y+ I F  +
Sbjct: 195 WLYYREREDFFFWYSIGLALIGIGLVAVHFPSVLGSPLGWVGRSAQYLGGVYILIAFIAL 254


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.322    0.174    0.519 

Lambda     K      H
   0.267   0.0531    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,447,390,694
Number of Sequences: 14124377
Number of extensions: 368111956
Number of successful extensions: 2679128
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 7144
Number of HSP's successfully gapped in prelim test: 62570
Number of HSP's that attempted gapping in prelim test: 2531255
Number of HSP's gapped (non-prelim): 155861
length of query: 279
length of database: 4,842,793,630
effective HSP length: 137
effective length of query: 142
effective length of database: 2,907,753,981
effective search space: 412901065302
effective search space used: 412901065302
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.1 bits)
S2: 81 (35.4 bits)