RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddA 
           21,609 sequences; 6,263,737 total letters

Searching..................................................done

Query= gi|254780994|ref|YP_003065407.1| hypothetical protein
CLIBASIA_04475 [Candidatus Liberibacter asiaticus str. psy62]
         (53 letters)



>gnl|CDD|38989 KOG3785, KOG3785, KOG3785, Uncharacterized conserved protein
           [Function unknown].
          Length = 557

 Score = 26.1 bits (57), Expect = 2.4
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 3/36 (8%)

Query: 18  NFSKAIEVRYTRLLEDNPILIGMGEGILFCGIFYAL 53
           ++ +AI+V Y R+L+DNP  I +   +  C  +Y L
Sbjct: 166 HYQEAIDV-YKRVLQDNPEYIALNVYMALC--YYKL 198


>gnl|CDD|36550 KOG1336, KOG1336, KOG1336, Monodehydroascorbate/ferredoxin
           reductase [General function prediction only].
          Length = 478

 Score = 25.3 bits (55), Expect = 4.1
 Identities = 6/43 (13%), Positives = 15/43 (34%)

Query: 2   NGDIFLVHRRDEMDSKNFSKAIEVRYTRLLEDNPILIGMGEGI 44
              + +V     +  + F  +I   Y    E+  +   +G  +
Sbjct: 236 AKSVTVVFPEPWLLPRLFGPSIGQFYEDYYENKGVKFYLGTVV 278


  Database: CddA
    Posted date:  Feb 4, 2011  9:38 PM
  Number of letters in database: 6,263,737
  Number of sequences in database:  21,609
  
Lambda     K      H
   0.329    0.149    0.445 

Gapped
Lambda     K      H
   0.267   0.0554    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21609
Number of Hits to DB: 677,315
Number of extensions: 25255
Number of successful extensions: 93
Number of sequences better than 10.0: 1
Number of HSP's gapped: 93
Number of HSP's successfully gapped: 5
Length of query: 53
Length of database: 6,263,737
Length adjustment: 26
Effective length of query: 27
Effective length of database: 5,701,903
Effective search space: 153951381
Effective search space used: 153951381
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 51 (23.8 bits)