HHsearch alignment of GI: 254780995 and MMDB domain: 2jc5_A_
>2jc5_A (A:) Exodeoxyribonuclease; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: BCN DIO GOL; 1.50A {Neisseria meningitidis}
Probab=98.93 E-value=2.3e-09 Score=69.89 Aligned_cols=113 Identities=16% Similarity=0.158 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCH----------------HHHHCCCCCCC---HHHCCCCCCCCC
Q ss_conf 99999999999851169988999614777688310027----------------87632655410---000257676871
Q gi|254780995|r 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDD----------------FWQKMDPDGLL---IRFPQEKESTCN 64 (125)
Q Consensus 4 ~Q~~~L~~~i~~~~~~~~pvIi~GDFN~~~~~~~~~~~----------------~~~~l~~~~~~---~~~~~~~~~~~~ 64 (125)
++...+..........+.+.+++||||..+........ ....+.+.+.. .........+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 204 (259)
T 2jc5_A 125 RFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTW 204 (259)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEEEECCCCCSGGGBSCSTTCTTSTTSCHHHHHHHHHHHHTTCCEEHHHHHCTTCCCCCE
T ss_pred HHHHHHHHCCCCCCCCCCCCEECCCCCCCCHHHHHCCCCCCCCCCCCCEEECCCCEEECCCCCCCEEEEECCCCCCCCEE
T ss_conf 55443211021123344431110000124213221032123111464210001010001036851122212676677513
Q ss_pred CCCCCCCCCCCCCCCCHHHHCCCCCCCE--EEEECCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 0388755433355210121002573211--543024741125867887564999996164
Q gi|254780995|r 65 VIKRNKSSLDYFVIDRDNKNFLIDNSFS--IVSYDQSDLDTRRSKLSTHCPLTIEYDFEK 122 (125)
Q Consensus 65 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~SDH~PV~~~l~f~~ 122 (125)
+...... .......+||++++++++. +....+ ..+.++|||+||+++|+|++
T Consensus 205 ~~~~~~~--~~~~~~~rID~I~~s~~~~~~~~~~~~----~~~~~~SDH~pV~~~l~l~~ 258 (259)
T 2jc5_A 205 WSNRGQA--YAKDVGWRIDYQMVTPELAAKAVSAHV----YKDEKFSDHAPLVVEYDYAA 258 (259)
T ss_dssp ESCSSHH--HHTTCEECCEEEEECHHHHTTEEEEEE----CCSSCCSSBCCEEEEESCCC
T ss_pred ECCCCCC--CCCCCCEEEEEEEECHHHHHHCEEEEE----CCCCCCCCCCCEEEEEECCC
T ss_conf 0246886--347988323899955289632249999----89999888323899997788