HHsearch alignment of GI: 254780995 and MMDB domain: 2o3h_A_
>2o3h_A (A:) DNA-(apurinic or apyrimidinic site) lyase; APE, endonuclease; 1.90A {Homo sapiens} PDB: 1bix_A 1dew_A* 1de8_B* 1de9_A* 2o3c_A
Probab=99.05 E-value=5.3e-10 Score=73.30 Aligned_cols=111 Identities=16% Similarity=0.198 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHH----------------H---HC-CCCCCCHHHCCCCCCC
Q ss_conf 89999999999985116998899961477768831002787----------------6---32-6554100002576768
Q gi|254780995|r 3 SQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFW----------------Q---KM-DPDGLLIRFPQEKEST 62 (125)
Q Consensus 3 ~~Q~~~L~~~i~~~~~~~~pvIi~GDFN~~~~~~~~~~~~~----------------~---~l-~~~~~~~~~~~~~~~~ 62 (125)
.++.+.+.+++.+. ..+.++|++||||..+.......... . .. ...............+
T Consensus 153 ~~~~~~~~~~~~~~-~~~~~~i~~gd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T 2o3h_A 153 QRWDEAFRKFLKGL-ASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAY 231 (285)
T ss_dssp HHHHHHHHHHHHHH-HTTSCEEEEEECSCCCSGGGBSCTTTCTTSTTSCHHHHHHHHHHHHHTTCEEHHHHHCTTCCSCC
T ss_pred HHEEECCCCCCCCC-CCCCEEEECCCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCE
T ss_conf 00110241121112-45533774044545731333045111211333221122333222212475201022047889842
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHCCCCCCCE--EEEECCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 710388755433355210121002573211--5430247411258678875649999961
Q gi|254780995|r 63 CNVIKRNKSSLDYFVIDRDNKNFLIDNSFS--IVSYDQSDLDTRRSKLSTHCPLTIEYDF 120 (125)
Q Consensus 63 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~SDH~PV~~~l~f 120 (125)
+++...... .......+||+++++.++. +..+.+. ...++|||+||+++|+|
T Consensus 232 t~~~~~~~~--~~~~~~~riD~I~~s~~~~~~~~~~~~~----~~~~~SDH~pV~~~l~l 285 (285)
T 2o3h_A 232 TFWTYMMNA--RSKNVGWRLDYFLLSHSLLPALCDSKIR----SKALGSDHCPITLYLAL 285 (285)
T ss_dssp SBCCSSTTH--HHHTCCBCCEEEEECGGGGGGEEEEEEC----TTCCSSSBCCEEEEECC
T ss_pred EEECCCCCC--CCCCCCEEEEEEEECHHHHHHEEEEEEC----CCCCCCCCCCEEEEEEC
T ss_conf 113676886--5379866768999782897120179985----89999981148999979