HHsearch results for GI: 254780995 and protein with PDBid: 2f1n_A
>2f1n_A CDT B, cytolethal distending toxin subunit B; E.coli, DNAse I, microbatch; 1.73A {Escherichia coli} SCOP: d.151.1.1
Probab=99.15 E-value=1.1e-11 Score=81.59 Aligned_cols=88 Identities=16% Similarity=0.133 Sum_probs=43.8
Q ss_pred HCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEE
Q ss_conf 11699889996147776883100278763265541000025767687103887554333552101210025732115430
Q gi|254780995|r 17 IKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSY 96 (125)
Q Consensus 17 ~~~~~pvIi~GDFN~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 96 (125)
...+.|+|++||||..+.+....- ...+... .....+ +..++.....+||+++++.+......-..
T Consensus 174 ~~~~~~~iv~GDfN~~~~~~~~~~--~~~~~~~--~~~~~~-----~~~t~~~~~riD~i~~s~~~~~~~~~~~~----- 239 (262)
T 2f1n_A 174 VHQALNWMILGDFNREPADLEMNL--TVPVRRA--SEIISP-----AAATQTSQRTLDYAVAGNSVAFRPSPLQA----- 239 (262)
T ss_dssp HHHTCEEEEEEECSSCHHHHHTTS--CHHHHHT--EEEECC-----SSCSBTTSCCCEEEEEEESSCCCCCCCEE-----
T ss_pred HCCCCCEEECCCCCCCCHHHHHHH--HHHHHHH--HHHCCC-----CCCCCCCCCEEEEEEECCCHHCCCCEEEE-----
T ss_conf 367997573476465715677766--5343332--031289-----98757999829999980816535213689-----
Q ss_pred CCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 2474112586788756499999
Q gi|254780995|r 97 DQSDLDTRRSKLSTHCPLTIEY 118 (125)
Q Consensus 97 ~~~~~~~~~~~~SDH~PV~~~l 118 (125)
.+.........+||||||.++|
T Consensus 240 ~~~~~~~~~~~~SDH~PV~~~~ 261 (262)
T 2f1n_A 240 GIVYGARRTQISSDHFPVGVSR 261 (262)
T ss_dssp EETTTTSCCCCSCSBCCEEEEC
T ss_pred EEEECCCCCCCCCCCHHEEEEE
T ss_conf 9850335899648854238984