HHsearch results for GI: 254780995 and protein with PDBid: 2j63_A
>2j63_A AP-endonuclease; base excision repair, lyase; 2.48A {Leishmania major}
Probab=99.59 E-value=3.1e-15 Score=100.46 Aligned_cols=98 Identities=16% Similarity=0.202 Sum_probs=57.2
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCH-------------------HHHHCCCCC---CCHHH-CCCCCCCCCCCCCCCCCCC
Q ss_conf 169988999614777688310027-------------------876326554---10000-2576768710388755433
Q gi|254780995|r 18 KTGIPFVIAGDFNRKINSIGDTDD-------------------FWQKMDPDG---LLIRF-PQEKESTCNVIKRNKSSLD 74 (125)
Q Consensus 18 ~~~~pvIi~GDFN~~~~~~~~~~~-------------------~~~~l~~~~---~~~~~-~~~~~~~~~~~~~~~~~~d 74 (125)
..+.|+|||||||+.+.+.+.+.. +.+.+...+ .++.. +.....+|||..+...+..
T Consensus 345 ~~~~~vIl~GDfNv~~~~~D~~~~~~~~~~~~~~g~~~eER~~~~~~l~~~glvDafR~~hP~~~~~YT~W~~r~~~r~~ 424 (467)
T 2j63_A 345 SSPHGFIWAGDLNVAERDYDRYYAGTFKSMQECSGFAPEERMSFRETMQRTNSVDIFRQLYPQAGPVYSFWSQRINGRPR 424 (467)
T ss_dssp CCSCEEEEEEECCCCCSTTSBCCCSCHHHHTTSTTSCHHHHHHHHHHHHHTTEEEHHHHHCTTBCSCCSBCCTTTTTTTT
T ss_pred CCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 25774687244355752110222232430367877898999999999986798994430359989983882877784325
Q ss_pred CCCCCCHHHHCCCCCCC--EEEEECCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 35521012100257321--154302474112586788756499999616
Q gi|254780995|r 75 YFVIDRDNKNFLIDNSF--SIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121 (125)
Q Consensus 75 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~SDH~PV~~~l~f~ 121 (125)
..+.|||+++++..+ ++..+.+. ...++||||||+++|.|.
T Consensus 425 --n~G~RIDyilvS~~L~~~V~~~~I~----~~~~gSDH~PV~l~Lr~p 467 (467)
T 2j63_A 425 --NLGWRLDYFVVSSRLASYVVDCFPM----PTVMGSDHCPFQMWMRHP 467 (467)
T ss_dssp --TCCBCCEEEEEEGGGGGGEEEEEEC----TTCCSSSBCCEEEEEECC
T ss_pred --CCCEEEEEEEECHHHHHHCEEEEEC----CCCCCCCCCCEEEEEECC
T ss_conf --9866025999776997023089986----899968804649998689