HHsearch results for GI: 254780995 and protein with PDBid: 2j63_A

>2j63_A AP-endonuclease; base excision repair, lyase; 2.48A {Leishmania major}
Probab=99.59  E-value=3.1e-15  Score=100.46  Aligned_cols=98  Identities=16%  Similarity=0.202  Sum_probs=57.2

Q ss_pred             CCCCCEEEEEECCCCCCCCCCCCH-------------------HHHHCCCCC---CCHHH-CCCCCCCCCCCCCCCCCCC
Q ss_conf             169988999614777688310027-------------------876326554---10000-2576768710388755433
Q gi|254780995|r   18 KTGIPFVIAGDFNRKINSIGDTDD-------------------FWQKMDPDG---LLIRF-PQEKESTCNVIKRNKSSLD   74 (125)
Q Consensus        18 ~~~~pvIi~GDFN~~~~~~~~~~~-------------------~~~~l~~~~---~~~~~-~~~~~~~~~~~~~~~~~~d   74 (125)
                      ..+.|+|||||||+.+.+.+.+..                   +.+.+...+   .++.. +.....+|||..+...+..
T Consensus       345 ~~~~~vIl~GDfNv~~~~~D~~~~~~~~~~~~~~g~~~eER~~~~~~l~~~glvDafR~~hP~~~~~YT~W~~r~~~r~~  424 (467)
T 2j63_A          345 SSPHGFIWAGDLNVAERDYDRYYAGTFKSMQECSGFAPEERMSFRETMQRTNSVDIFRQLYPQAGPVYSFWSQRINGRPR  424 (467)
T ss_dssp             CCSCEEEEEEECCCCCSTTSBCCCSCHHHHTTSTTSCHHHHHHHHHHHHHTTEEEHHHHHCTTBCSCCSBCCTTTTTTTT
T ss_pred             CCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             25774687244355752110222232430367877898999999999986798994430359989983882877784325


Q ss_pred             CCCCCCHHHHCCCCCCC--EEEEECCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             35521012100257321--154302474112586788756499999616
Q gi|254780995|r   75 YFVIDRDNKNFLIDNSF--SIVSYDQSDLDTRRSKLSTHCPLTIEYDFE  121 (125)
Q Consensus        75 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~SDH~PV~~~l~f~  121 (125)
                        ..+.|||+++++..+  ++..+.+.    ...++||||||+++|.|.
T Consensus       425 --n~G~RIDyilvS~~L~~~V~~~~I~----~~~~gSDH~PV~l~Lr~p  467 (467)
T 2j63_A          425 --NLGWRLDYFVVSSRLASYVVDCFPM----PTVMGSDHCPFQMWMRHP  467 (467)
T ss_dssp             --TCCBCCEEEEEEGGGGGGEEEEEEC----TTCCSSSBCCEEEEEECC
T ss_pred             --CCCEEEEEEEECHHHHHHCEEEEEC----CCCCCCCCCCEEEEEECC
T ss_conf             --9866025999776997023089986----899968804649998689