HHsearch results for GI: 254780995 and protein with PDBid: 2jc4_A
>2jc4_A Exodeoxyribonuclease III; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: 1PE; 1.90A {Neisseria meningitidis}
Probab=99.38 E-value=9.8e-13 Score=87.11 Aligned_cols=112 Identities=18% Similarity=0.186 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCH---------------HHHHCCCCCC---CHHHCCCCCCCCCCCCC
Q ss_conf 99999999851169988999614777688310027---------------8763265541---00002576768710388
Q gi|254780995|r 7 EWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDD---------------FWQKMDPDGL---LIRFPQEKESTCNVIKR 68 (125)
Q Consensus 7 ~~L~~~i~~~~~~~~pvIi~GDFN~~~~~~~~~~~---------------~~~~l~~~~~---~~~~~~~~~~~~~~~~~ 68 (125)
..+.++..+....+.|++++||||..+.+.....+ ....+...+. .....++....+++...
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~gd~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 204 (256)
T 2jc4_A 125 AALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAFYTWFDYR 204 (256)
T ss_dssp HHHHHHHHHHHTTCSSEEEEEECCCCCSGGGBSSGGGGTTCTTSCHHHHHHHHHHHTTTCEEHHHHHCCSSCCCCBCCTT
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC
T ss_conf 99998888762248874303432358648776073430145458989999887543157389887613898763257876
Q ss_pred CCCCCCCCCCCCHHHHCCCCCCC--EEEEECCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 75543335521012100257321--15430247411258678875649999961
Q gi|254780995|r 69 NKSSLDYFVIDRDNKNFLIDNSF--SIVSYDQSDLDTRRSKLSTHCPLTIEYDF 120 (125)
Q Consensus 69 ~~~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~SDH~PV~~~l~f 120 (125)
..... ...+.|||++++++++ ++....+.........+|||+||+++|+|
T Consensus 205 ~~~~~--~~~g~RIDyI~~S~~l~~~v~~~~v~~~~~~~~~~SDH~PV~~~l~~ 256 (256)
T 2jc4_A 205 GAMFQ--RKLGLRIDHILVSPAMAAALKDVRVDLETRALERPSDHAPVTAEFDW 256 (256)
T ss_dssp TTHHH--HTCCBCCEEEEECHHHHTTEEEEEECHHHHTSSSCCSBCCEEEEECC
T ss_pred CCCCC--CCCCEEEEEEEECHHHHHHCEEEEEEECCCCCCCCCCCCCEEEEEEC
T ss_conf 77241--68854668999685997332699997312479999982268999969