HHsearch results for GI: 254780995 and protein with PDBid: 2o3h_A
>2o3h_A DNA-(apurinic or apyrimidinic site) lyase; APE, endonuclease; 1.90A {Homo sapiens} PDB: 1bix_A 1dew_A* 1de8_B* 1de9_A* 2o3c_A
Probab=99.15 E-value=1.8e-10 Score=75.05 Aligned_cols=100 Identities=17% Similarity=0.231 Sum_probs=51.6
Q ss_pred HHHCCCCCEEEEEECCCCCCCCCCCCH----------------HHHHCCCCCC----CHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 851169988999614777688310027----------------8763265541----00002576768710388755433
Q gi|254780995|r 15 QKIKTGIPFVIAGDFNRKINSIGDTDD----------------FWQKMDPDGL----LIRFPQEKESTCNVIKRNKSSLD 74 (125)
Q Consensus 15 ~~~~~~~pvIi~GDFN~~~~~~~~~~~----------------~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~d 74 (125)
.....+.++|++||||..+......+. +.+.+...+. ....+.....++||+++...+.
T Consensus 164 ~~~~~~~~~i~~gd~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~r~~~p~~~~~yT~~s~~~~~~~- 242 (285)
T 2o3h_A 164 KGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARS- 242 (285)
T ss_dssp HHHHTTSCEEEEEECSCCCSGGGBSCTTTCTTSTTSCHHHHHHHHHHHHHTTCEEHHHHHCTTCCSCCSBCCSSTTHHH-
T ss_pred HHHCCCCEEEEECCHHCCCCHHHCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEECCCCCCCC-
T ss_conf 4304654389705111286243204767642002468388888999974147544202424899982675458788452-
Q ss_pred CCCCCCHHHHCCCCCCCE--EEEECCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 355210121002573211--5430247411258678875649999961
Q gi|254780995|r 75 YFVIDRDNKNFLIDNSFS--IVSYDQSDLDTRRSKLSTHCPLTIEYDF 120 (125)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~SDH~PV~~~l~f 120 (125)
...+.|||++++++++. +..+.+. ...++|||+||+++|++
T Consensus 243 -~~~g~RID~Il~S~~l~~~v~~~~v~----~~~~~SDH~PV~v~L~l 285 (285)
T 2o3h_A 243 -KNVGWRLDYFLLSHSLLPALCDSKIR----SKALGSDHCPITLYLAL 285 (285)
T ss_dssp -HTCCBCCEEEEECGGGGGGEEEEEEC----TTCCSSSBCCEEEEECC
T ss_pred -CCCCEEEEEEEECHHHHHHCEEEEEC----CCCCCCCCCCEEEEEEC
T ss_conf -79966768999783897131078987----89999983268999979