HHsearch results for GI: 254780995 and protein with PDBid: 2voa_A
>2voa_A AF_EXO, XTHA, exodeoxyribonuclease III; EXOIII, AP endonuclease, lyase; 1.7A {Archaeoglobus fulgidus}
Probab=99.21 E-value=5.2e-11 Score=77.87 Aligned_cols=105 Identities=17% Similarity=0.109 Sum_probs=58.8
Q ss_pred HHHCCCCCEEEEEECCCCCCCCCCCCHH---------------HHHCCCCCC---CHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8511699889996147776883100278---------------763265541---0000257676871038875543335
Q gi|254780995|r 15 QKIKTGIPFVIAGDFNRKINSIGDTDDF---------------WQKMDPDGL---LIRFPQEKESTCNVIKRNKSSLDYF 76 (125)
Q Consensus 15 ~~~~~~~pvIi~GDFN~~~~~~~~~~~~---------------~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~ 76 (125)
.....+.+++++||||.........+.. .+.+.+.+. +....++....++|........ ..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~D~~r~~~~~~~~~~~~~~~~~~~~-~~ 211 (257)
T 2voa_A 133 KTVDFRSFAVWCGDMNVAPEPIDVHSPDKLKNHVCFHEDARRAYKKILELGFVDVLRKIHPNERIYTFYDYRVKGAI-ER 211 (257)
T ss_dssp HHCCTTSCEEEEEECSCCCSGGGBSCGGGCTTSTTTCHHHHHHHHHHHTTTCEEHHHHHSTTCCCCSBCCTTSTTTT-TT
T ss_pred HHHHHCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCC-CC
T ss_conf 86642023233331013840643358043346665788999999999876881201543799986310676578743-47
Q ss_pred CCCCHHHHCCCCCCC--EEEEECCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 521012100257321--15430247411258678875649999961
Q gi|254780995|r 77 VIDRDNKNFLIDNSF--SIVSYDQSDLDTRRSKLSTHCPLTIEYDF 120 (125)
Q Consensus 77 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~SDH~PV~~~l~f 120 (125)
..+.|||++++++++ ++..+.+......+..+|||+||+++|++
T Consensus 212 ~~g~RIDyIl~s~~l~~~~~~~~v~~~~~~~~~~SDH~PV~~~l~i 257 (257)
T 2voa_A 212 GLGWRGDAILATPPLAERCVDCYADIKPRLAEKPSDHLPLVAVFDV 257 (257)
T ss_dssp TCCBCCEEEEECHHHHTTEEEEEECCHHHHSSSCCSBCCEEEEECC
T ss_pred CCCEEEEEEEECHHHHHHHCEEEEEEEECCCCCCCCCEEEEEEEEC
T ss_conf 9967779999786998652089986510479999982379999989