HHsearch results for GI: 254780995 and protein with PDBid: 3mpr_A
>3mpr_A Putative endonuclease/exonuclease/phosphatase FAM protein; structural genomics, PSI-2, protein structure initiative; HET: MSE PEG; 1.90A {Bacteroides thetaiotaomicron}
Probab=99.43 E-value=2.9e-13 Score=89.96 Aligned_cols=111 Identities=14% Similarity=0.084 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHH-HHCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCHHHCCCCCCCCCCCC----CCCCCCCCCCC
Q ss_conf 999999999998-5116998899961477768831002787632655410000257676871038----87554333552
Q gi|254780995|r 4 QQGEWLKKWADQ-KIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIK----RNKSSLDYFVI 78 (125)
Q Consensus 4 ~Q~~~L~~~i~~-~~~~~~pvIi~GDFN~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~~~~ 78 (125)
++++.....+.. ....+.|+|+|||||..+.+.............+............++++.. ....++|||++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~i~~GDfN~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~t~~~~~~~~~~~~riDyI~~ 232 (298)
T 3mpr_A 153 ESAFLVQEKMKELGRGKNLPAILTGDFNVDQTHQSYDAFVSKGVLCDSYEKCDYRYALNGTFNNFDPNSFTESRIDHIFV 232 (298)
T ss_dssp HHHHHHHHHHHHTTTTSCCCEEEEEECSSCTTSHHHHHHHTTSSSEEHHHHCSEEECSSCSBCTTCTTCCCSCCCEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 99888888886530257887897073498988366765543020355787616567898875544678888861568996
Q ss_pred CCHHHHCCCCCCCEEEEECCC------------------------CCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 101210025732115430247------------------------411258678875649999961646
Q gi|254780995|r 79 DRDNKNFLIDNSFSIVSYDQS------------------------DLDTRRSKLSTHCPLTIEYDFEKG 123 (125)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~SDH~PV~~~l~f~~~ 123 (125)
++ ++.+..+.+. ........+|||+||+++|+|+.-
T Consensus 233 s~---------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~PV~~~~~~~~~ 292 (298)
T 3mpr_A 233 SP---------SFHVKRYGVLTDTYRSVRENSKKEDVRDCPEEITIKAYEARTPSDHFPVKVELVFDLE 292 (298)
T ss_dssp CT---------TSEEEEEEECCCCEEEECC----------------CCEEEECSSSBCCEEEEEEECSS
T ss_pred CC---------CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
T ss_conf 79---------7404678996044323222223444444322234456788997842208999999376