HHsearch results for GI: 254780995 and protein with PDBid: 3ngq_A
>3ngq_A CCR4-NOT transcription complex subunit 6-like; alpha/beta sandwich fold, hydrolase; HET: 1PS; 1.80A {Homo sapiens} PDB: 3ngo_A 3ngn_A
Probab=99.38 E-value=8.9e-13 Score=87.33 Aligned_cols=119 Identities=13% Similarity=0.023 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHH-------------CCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCH----------------
Q ss_conf 899999999999851-------------169988999614777688310027876326554100----------------
Q gi|254780995|r 3 SQQGEWLKKWADQKI-------------KTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLI---------------- 53 (125)
Q Consensus 3 ~~Q~~~L~~~i~~~~-------------~~~~pvIi~GDFN~~~~~~~~~~~~~~~l~~~~~~~---------------- 53 (125)
.+|++.|.++++... ..+.|+|++||||..+.+..+.......+.. ....
T Consensus 215 ~~q~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~GDfN~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 293 (398)
T 3ngq_A 215 LIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSNGGVAD-NHKDFKELRYNECLMNFSCN 293 (398)
T ss_dssp HHHHHHHHHHHHHHHCC-------------CCCEEEEEECSCCTTSHHHHHHHHTEEET-TCGGGCC-----GGGGGCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCC-CCHHHHHHCCCCCCCCCCCC
T ss_conf 99999999999999987665320123445687448714546787647899987089774-31034440344444445655
Q ss_pred ------------------HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEECCC-----CCCCCCCCCCC
Q ss_conf ------------------0025767687103887554333552101210025732115430247-----41125867887
Q gi|254780995|r 54 ------------------RFPQEKESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQS-----DLDTRRSKLST 110 (125)
Q Consensus 54 ------------------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~SD 110 (125)
........++.+.......+|||+++...... ............ .......++||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~riDyI~~s~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~SD 371 (398)
T 3ngq_A 294 GKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFKGVIDYIFYSKTHMNV--EGVLGPLDPQWLVENNITGCPHPHIPSD 371 (398)
T ss_dssp ------CCEEECSCCEEETTTTTSSSCSEECSSCEECCEEEEEETTTEEE--EEEECCCCHHHHHHTTCCSSCBTTBCSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCE--EEEECCCCHHHHCCCCCCCCCCCCCCCC
T ss_conf 43344664445676554334578787520249989538899973764634--4420567778712000257778899885
Q ss_pred CCCEEEEEECCCCC
Q ss_conf 56499999616468
Q gi|254780995|r 111 HCPLTIEYDFEKGN 124 (125)
Q Consensus 111 H~PV~~~l~f~~~~ 124 (125)
|+||+++|+|+-.+
T Consensus 372 H~pV~a~~~l~~~~ 385 (398)
T 3ngq_A 372 HFSLLTQLELHPPL 385 (398)
T ss_dssp BCCEEEEEEECCC-
T ss_pred CHHEEEEEEECCCC
T ss_conf 14079999971899