HHSEARCH alignment of GI: 254780995 and SCOP domain: d1zwxa1

Alignment
>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C {Listeria ivanovii [TaxId: 1638]}
Probab=99.42  E-value=3e-13  Score=88.61  Aligned_cols=116  Identities=16%  Similarity=0.075  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHH-HCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCHHHCCCC----CCCC----CCCCCCCCCC
Q ss_conf             89999999999985-1169988999614777688310027876326554100002576----7687----1038875543
Q gi|254780995|r    3 SQQGEWLKKWADQK-IKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEK----ESTC----NVIKRNKSSL   73 (125)
Q Consensus         3 ~~Q~~~L~~~i~~~-~~~~~pvIi~GDFN~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~----~~~~~~~~~~   73 (125)
                      .+|++.+.+++.++ ...+.|+|||||||..+.+......... +.............    ....    ......+..+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~vil~GDfN~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  241 (293)
T d1zwxa1         163 AEQMQEIQTFIAKKNIPKDEIIFIGGDLNVNYGTDEYHDMLKL-LNVSSPANFNGQMATWDPTTNSMLKESYPKAAPEYL  241 (293)
T ss_dssp             HHHHHHHHHHHHHHTCCTTSEEEEEEECCCCTTSHHHHHHHHH-HTBCCCTTCCTTSCSBCTTTCHHHHHHCTTSCCBCC
T ss_pred             HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHH-CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf             9989886545554036889848998066989885578888753-365553230467764455324444545578988607


Q ss_pred             CCCCCCCHHHHCCCCCCCEEE------EECCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf             335521012100257321154------3024741125867887564999996
Q gi|254780995|r   74 DYFVIDRDNKNFLIDNSFSIV------SYDQSDLDTRRSKLSTHCPLTIEYD  119 (125)
Q Consensus        74 d~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~SDH~PV~~~l~  119 (125)
                      |||++++..............      .............+|||+||+++++
T Consensus       242 D~I~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~PV~A~~~  293 (293)
T d1zwxa1         242 DYIFVENGHARPHSWHNKVLHTKSPQWSVKSWFKTYTYQDFSDHYPVVGFTD  293 (293)
T ss_dssp             EEEEEBTTSCCCSCEEEEECCCCCCCEEEEETTEEEEECCSSSSCCEEEEEC
T ss_pred             EEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf             8999846303643222047752166301134335688899488178499959


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Sphingomyelin phosphodiesterase-like
domain: Sphingomyelin phosphodiesterase C
species: Listeria ivanovii [TaxId: 1638]