HHSEARCH alignment of GI: 254780995 and SCOP domain: d2f1na1

Alignment
>d2f1na1 d.151.1.1 (A:1-250) Cytolethal distending toxin subunit B {Escherichia coli [TaxId: 562]}
Probab=99.18  E-value=4.3e-12  Score=82.39  Aligned_cols=99  Identities=14%  Similarity=0.116  Sum_probs=47.1

Q ss_pred             HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             99999999998511699889996147776883100278763265541000025767687103887554333552101210
Q gi|254780995|r    5 QGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLDYFVIDRDNKN   84 (125)
Q Consensus         5 Q~~~L~~~i~~~~~~~~pvIi~GDFN~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~   84 (125)
                      +.+.+.+++........|+|+|||||..+.+......  ..+..  ........     .+++.....+||+++++.+..
T Consensus       151 ~~~~~~~~~~~~~~~~~~~iv~GDfN~~p~~~~~~~~--~~~~~--~~~~~~~~-----~~t~~~~~riD~i~~s~~~~~  221 (250)
T d2f1na1         151 EVYNFFRDSRDPVHQALNWMILGDFNREPADLEMNLT--VPVRR--ASEIISPA-----AATQTSQRTLDYAVAGNSVAF  221 (250)
T ss_dssp             HHHHHHHTCSSHHHHTCEEEEEEECSSCHHHHHTTSC--HHHHH--TEEEECCS-----SCSBTTSCCCEEEEEEESSCC
T ss_pred             HHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHH--CCCCC--EEEECCCC-----CCCCCCCCCEEEEEEECHHHC
T ss_conf             9999999987641468866873455768712555542--01122--12321879-----886579995799998266862


Q ss_pred             CCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEE
Q ss_conf             025732115430247411258678875649999
Q gi|254780995|r   85 FLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIE  117 (125)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~SDH~PV~~~  117 (125)
                      ....    + .............+||||||.++
T Consensus       222 ~~~~----~-~~~~~~~~~~~~~~SDH~PV~~~  249 (250)
T d2f1na1         222 RPSP----L-QAGIVYGARRTQISSDHFPVGVS  249 (250)
T ss_dssp             CCCC----C-EEEETTTTSCCCCSCSBCCEEEE
T ss_pred             CCCE----E-EEEEECCCCCCCCCCCCCCEEEE
T ss_conf             6413----6-78875143589971884255876


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Cytolethal distending toxin subunit B
species: Escherichia coli [TaxId: 562]