HHsearch alignment for GI: 254780999 and conserved domain: COG0301
>COG0301 ThiI Thiamine biosynthesis ATP pyrophosphatase [Coenzyme metabolism].
Probab=97.05 E-value=0.024 Score=34.52 Aligned_cols=168 Identities=20% Similarity=0.229 Sum_probs=96.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCHHHEEEEEC-CCCCCCCCCHHHHHHHH-HHHC-----CCCCCCCHHHHHHHHHHH
Q ss_conf 4057521587236899999984149544679732-46666522135699999-9721-----354267758999998863
Q gi|254780999|r 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIML-PYKYTSPQSLEDAAACA-KALG-----CKYDVLPIHDLVNHFFSL 365 (562)
Q Consensus 293 ~~~viglSGGiDSal~a~la~~alg~~~v~~~~m-p~~~~s~~s~~~a~~la-~~lg-----~~~~~i~I~~~~~~~~~~ 365 (562)
T Consensus 176 Gk~l~LlSGGIDSPVA~~l~mkR-G~-~v~~v~f~~~p~~~~~a~~k~~~l~~~~~~~~~~~~~~~~v~f~~v~~~i~~~ 253 (383)
T COG0301 176 GKVLLLLSGGIDSPVAAWLMMKR-GV-EVIPVHFGNPPYTSEKAREKVVALALLRLTSYGGKVRLYVVPFTEVQEEILEK 253 (383)
T ss_pred CCEEEEEECCCCHHHHHHHHHHC-CC-EEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHH
T ss_conf 74899970787749999999856-98-77999972799851889999999986430246872289997629999999863
Q ss_pred HCCCCCCCCCCHHHHCCCCHHHHH-HHHHHHHHCCCEECCCCCHH-----HHHHH-HCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 132346874310110123304667-79888751695443643244-----77541-102366655540101776336589
Q gi|254780999|r 366 MSQFLQEEPSGIVAENIQSRIRGN-ILMALSNHSKAMLLTTSNKS-----EISVG-YGTLYGDMSGGFNPLKDLYKTQVF 438 (562)
Q Consensus 366 ~~~~~~~~~~~~~~eN~qaR~R~~-~L~~~an~~~~lvl~t~nks-----E~~~G-y~T~~GD~~g~~~p~~~l~Kt~v~ 438 (562)
T Consensus 254 ~~~----~y~-----~v~~rR~M~riA~~iae~~g~~aIvtGEsLGQVASQTl~nL~~i~~~t~~pIlRPLI~~DK~eIi 324 (383)
T COG0301 254 VPE----SYR-----CVLLKRMMYRIAEKLAEEFGAKAIVTGESLGQVASQTLENLRVIDSVTNTPVLRPLIGLDKEEII 324 (383)
T ss_pred CCC----CCE-----EHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHH
T ss_conf 675----302-----04789999999999999839839983686104667678889999815587423144579989999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
Q ss_conf 99999631033222344446688788288988453899
Q gi|254780999|r 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 (562)
Q Consensus 439 ~la~~~n~~~~~~~~~~~~~~ip~~i~~~~psaeL~~~ 476 (562)
T Consensus 325 ~~Ar~IgT~ei--Si~p~---e~cc~~f~p~~p~t~~~ 357 (383)
T COG0301 325 EIARRIGTYEI--SIEPP---EDCCVIFAPPTPKTKPK 357 (383)
T ss_pred HHHHHHCCHHH--HCCCC---CCCCCCCCCCCCCCCCC
T ss_conf 99998297443--13578---88857637998745752