HHsearch alignment for GI: 254780999 and conserved domain: COG0815
>COG0815 Lnt Apolipoprotein N-acyltransferase [Cell envelope biogenesis, outer membrane].
Probab=99.90 E-value=1e-21 Score=161.31 Aligned_cols=224 Identities=19% Similarity=0.276 Sum_probs=157.7
Q ss_pred CEEEEEEECCCC---CCCHHHHHHHHHH---HHHHHH--HCCCCEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 628999963883---6889999999999---999999--85998999166444799844541488999999999999999
Q gi|254780999|r 4 KLKIAIAQLNPV---VGDIAGNIAKARR---AREEAN--RQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 (562)
Q Consensus 4 ~mkIal~Q~n~~---~gd~~~N~~~i~~---~i~~A~--~~gadLvvfPEl~LtGY~~~Dl~~~~~f~~~~~~~l~~La~ 75 (562)
T Consensus 227 ~~~V~lvQ~nI~q~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~dlVIwPEtA~p-~~~~----------~~~~~~~~~~~ 295 (518)
T COG0815 227 TLTVALVQGNIPQDLKWDADALARLIAGYLEEEFLAAVDKQKPDLVVWPETALP-FDLT----------RHPDALARLAE 295 (518)
T ss_pred CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCC-CCHH----------HCCHHHHHHHH
T ss_conf 547999647885002678888988887654333100123789888983675555-5411----------13127889999
Q ss_pred HHHHCCCEEEEEEEEE--ECCE--EEEEEEEEEC-CEEEEEEEEEEECCCCCCC-------------C--CCCCCCCCCC
Q ss_conf 9887697899999998--8898--7899999969-9799988777623554333-------------2--1003778887
Q gi|254780999|r 76 DTHDGGAGIVVGFPRQ--DQEG--VLNSVVILDA-GNIIAVRDKINLPNYSEFH-------------E--KRTFISGYSN 135 (562)
Q Consensus 76 ~~~~~~i~iivG~p~~--~~~~--~yNsa~vi~~-G~il~~y~K~~LP~y~~Fd-------------E--~r~F~~G~~~ 135 (562)
T Consensus 296 ~~~~~~~~~iiG~~~~~~~~~~~~yyNSv~~~~~~~~~~~~ydK~~LVPFGEYiP~~~~l~~~~~~~~~~~~~f~~G~~~ 375 (518)
T COG0815 296 ALQRVGAPLLIGTDVDGPAPGGGIYYNSVLVLDPGGEGVYRYDKVHLVPFGEYIPFPELLRPLYFFLNLPMSDFSRGPGP 375 (518)
T ss_pred HHHCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCEECCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 98604996899603445688875312479996689875550043443077057560777667777634552345579988
Q ss_pred CEEEECC-EEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCC--HHHHHHHHHHHHHHCCCEEEECCCCCCCC
Q ss_conf 6147647-45620111111101689999971477759931555333580--78887889998543370464213568876
Q gi|254780999|r 136 DPIVFRD-IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK--LKKRHEIVTGQISHVHLPIIYVNQVGGQD 212 (562)
Q Consensus 136 ~~~~~~g-~kiGv~ICeDlw~~~~~~~~la~~Gadlii~psASp~~~~k--~~~R~~~~~~~a~e~~~~vvy~N~vGg~d 212 (562)
T Consensus 376 ~v~~~~~~~~~~~~ICYE~~F~~-~~r~~~~qga~~Lin~SNDAWf~~s~~p~QH~~~a~~RAiE~grp~iRAtNt---- 450 (518)
T COG0815 376 QVLLLAGGPKIAPLICYEAIFPE-LVRASARQGAELLLNLSNDAWFGGSWGPYQHFQQARVRAVELGRPLVRATNT---- 450 (518)
T ss_pred CCCCCCCCCEEEEEEEEEHHCHH-HHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCC----
T ss_conf 76113888445025664223339-8887541776289975565345999338899999999988608728997178----
Q ss_pred CCCCCCCCEEECCCCEEEEECCCCCCCEEEEEEEEC
Q ss_conf 621048643555898599961677763799999833
Q gi|254780999|r 213 ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD 248 (562)
Q Consensus 213 ~lvf~G~S~I~d~~G~ii~~~~~f~e~~~i~d~d~d 248 (562)
T Consensus 451 -----GiSavIdp~Gri~~~l~~~~~~~l~~~v~~~ 481 (518)
T COG0815 451 -----GISAVIDPRGRILAQLPYFTRGVLDATVPLK 481 (518)
T ss_pred -----CEEEEECCCCCEEEECCCCCCCEEEEECCCC
T ss_conf -----4058999999766425787741023311345