HHsearch alignment for GI: 254780999 and conserved domain: PRK10438
>PRK10438 hypothetical protein; Provisional.
Probab=100.00 E-value=0 Score=353.63 Aligned_cols=243 Identities=17% Similarity=0.229 Sum_probs=204.7
Q ss_pred CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 88628999963883688999999999999999985998999166444799844541488999999999999999988769
Q gi|254780999|r 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGG 81 (562)
Q Consensus 2 ~~~mkIal~Q~n~~~gd~~~N~~~i~~~i~~A~~~gadLvvfPEl~LtGY~~~Dl~~~~~f~~~~~~~l~~La~~~~~~~ 81 (562)
T Consensus 1 M~~mkial~Q~~~~~~D~~~Nl~~~~~~i~~a--~gadlivlPElf~tGy~~~~~~~--~-~-~~~~~~~~l~~~A~~~~ 74 (256)
T PRK10438 1 MSGLKITLLQQPLVWMDGPANLRHFDRQLEGI--TGRDVIVLPEMFTTGFAMEAAAS--S-L-PQDDVVNWMTAKAQQTN 74 (256)
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHC--CCCCEEECCCCCCCCCCCHHHHH--H-H-CCCHHHHHHHHHHHHCC
T ss_conf 99778999956676379999999999999745--49999990875567887215566--4-2-17589999999998789
Q ss_pred CEEEEEEEEEECCEEEEEEEEEEC-CEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCCHHHHHH
Q ss_conf 789999999888987899999969-9799988777623554333210037788876147647456201111111016899
Q gi|254780999|r 82 AGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNIC 160 (562)
Q Consensus 82 i~iivG~p~~~~~~~yNsa~vi~~-G~il~~y~K~~LP~y~~FdE~r~F~~G~~~~~~~~~g~kiGv~ICeDlw~~~~~~ 160 (562)
T Consensus 75 ~~i~g~~~~~~~~~~~N~~~~i~~~G~-v~~YrK~HL--f~~~~E~~~f~~G~~~~v~~~~g~~iG~~ICYDlrFPe-~~ 150 (256)
T PRK10438 75 ALIAGSVALQTESGAVNRFLLVEPGGT-VHFYDKRHL--FRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPV-WS 150 (256)
T ss_pred EEEEEEEEEECCCCCEEEEEEEECCCE-EEEECCEEC--CCCCCCEEEECCCCCCEEEEECCCEEEEEEEECCCCHH-HH
T ss_conf 099999989729972899999928966-988522405--89888201587999707999789137998862346849-99
Q ss_pred HHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCC-CCCCCCCCEEECCCCEEEEECCCCCCC
Q ss_conf 9997147775993155533358078887889998543370464213568876-621048643555898599961677763
Q gi|254780999|r 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD-ELIFDGASFCFDGQQQLAFQMKHFSEQ 239 (562)
Q Consensus 161 ~~la~~Gadlii~psASp~~~~k~~~R~~~~~~~a~e~~~~vvy~N~vGg~d-~lvf~G~S~I~d~~G~ii~~~~~f~e~ 239 (562)
T Consensus 151 r~--l~~~~~~~~~a~~p~~~--~~hW~~llrARAiENq~fv~~~N~~G~~~~g~~~~G~S~ivdP~G~vla~a~~~e~~ 226 (256)
T PRK10438 151 RN--LNDYDLALYVANWPAPR--SLHWQTLLTARAIENQAYVAGCNRVGSDGNGHHYRGDSRIINPQGEIIATADPHQAT 226 (256)
T ss_pred HH--HCCCCEEEEECCCCCCC--CHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECEEEECCCCCEEEECCCCCCE
T ss_conf 96--47597999966787641--178999999999865828999714445899988841309994997053647899978
Q ss_pred EEEEEEEECCCCCCCCCCC
Q ss_conf 7999998335212365557
Q gi|254780999|r 240 NFMTEWHYDQQLSQWNYMS 258 (562)
Q Consensus 240 ~~i~d~d~d~~~~~~~~~~ 258 (562)
T Consensus 227 ~i~a~id~~~v~~~R~~~P 245 (256)
T PRK10438 227 RIDAELSLVALQEYREKFP 245 (256)
T ss_pred EEEEEECHHHHHHHHHHCC
T ss_conf 9999951999999998787