HHsearch alignment for GI: 254780999 and conserved domain: PRK13980

>PRK13980 NAD synthetase; Provisional.
Probab=100.00  E-value=0  Score=583.63  Aligned_cols=255  Identities=39%  Similarity=0.574  Sum_probs=244.5

Q ss_pred             HHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             88864220203588876422454057521587236899999984149544679732466665221356999999721354
Q gi|254780999|r  271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY  350 (562)
Q Consensus       271 ~~e~~~~Alvlgl~d~~~~~g~~~~viglSGGiDSal~a~la~~alg~~~v~~~~mp~~~~s~~s~~~a~~la~~lg~~~  350 (562)
T Consensus         7 d~~~~~~~iv~~lrdy~~~~g~kg~VlGlSGGIDSavva~La~~Alg~~~v~~v~mP~~~ss~~s~~dA~~la~~lgi~~   86 (264)
T PRK13980          7 DYEKVREIIVDFIREEVEKAGFKGVVLGLSGGIDSAVVAYLAVKALGKENVLALLMPYRVSPPEDLEDALLVAERLGIEY   86 (264)
T ss_pred             CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCE
T ss_conf             89999999999999999980998099979868889999999998549660689989899998878999999999869984


Q ss_pred             CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             26775899999886313234687431011012330466779888751695443643244775411023666555401017
Q gi|254780999|r  351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLK  430 (562)
Q Consensus       351 ~~i~I~~~~~~~~~~~~~~~~~~~~~~~~eN~qaR~R~~~L~~~an~~~~lvl~t~nksE~~~Gy~T~~GD~~g~~~p~~  430 (562)
T Consensus        87 ~~i~I~~~~~~~~~~~~~-----~~~~~~~NiqaR~Rm~~Ly~~An~~~~lVlgTgNksE~~~Gy~TkyGD~~~d~~Pi~  161 (264)
T PRK13980         87 KVIEITPIVDAFFSAVPD-----ADRLRRGNIMARTRMVLLYDYANRDNRLVLGTSNKSELLLGYFTKYGDGAVDINPIG  161 (264)
T ss_pred             EEEECHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCCCCCCHHHHC
T ss_conf             998279999999986310-----006688875898999999998643397765588674798721001687665624525


Q ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCHHHHHH-
Q ss_conf             763365899999963103322234444668878828898845389997700068-878899999999827999779871-
Q gi|254780999|r  431 DLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQ-  508 (562)
Q Consensus       431 ~l~Kt~v~~la~~~n~~~~~~~~~~~~~~ip~~i~~~~psaeL~~~Q~ded~l~-~Y~~lD~il~~~i~~~~~~~~~~~-  508 (562)
T Consensus       162 dL~Kt~V~~La~~l~--------------vP~~Ii~k~PSa~L~~~Q~DE~~LG~~Y~~lD~iL~~~ie~~~~~~~i~~~  227 (264)
T PRK13980        162 DLYKTQVRELARHLG--------------VPEDIIEKPPSADLWEGQTDEDELGFSYEEIDEILYALFDKKMPREEILAQ  227 (264)
T ss_pred             CCCHHHHHHHHHHHC--------------CCHHHEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             873999999999939--------------966440369997767999987771999999999999999769999999987


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
Q ss_conf             -8999999999999987456687389702472645378
Q gi|254780999|r  509 -EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR  545 (562)
Q Consensus       509 -~~~~~~v~~~~~~~~~~~~KR~~~pp~~~is~~sfg~  545 (562)
T Consensus       228 ~g~~~~~v~~i~~~~~~se~KR~-~Pp~~kis~~~fg~  264 (264)
T PRK13980        228 LGIDEELVDRVRRRVQRSQHKRR-MPPIAKISGRTIGI  264 (264)
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCC-CCCCCEECCCCCCC
T ss_conf             19899999999999985402337-99943151776789