HHsearch alignment for GI: 254780999 and conserved domain: PRK13980
>PRK13980 NAD synthetase; Provisional.
Probab=100.00 E-value=0 Score=583.63 Aligned_cols=255 Identities=39% Similarity=0.574 Sum_probs=244.5
Q ss_pred HHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 88864220203588876422454057521587236899999984149544679732466665221356999999721354
Q gi|254780999|r 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 (562)
Q Consensus 271 ~~e~~~~Alvlgl~d~~~~~g~~~~viglSGGiDSal~a~la~~alg~~~v~~~~mp~~~~s~~s~~~a~~la~~lg~~~ 350 (562)
T Consensus 7 d~~~~~~~iv~~lrdy~~~~g~kg~VlGlSGGIDSavva~La~~Alg~~~v~~v~mP~~~ss~~s~~dA~~la~~lgi~~ 86 (264)
T PRK13980 7 DYEKVREIIVDFIREEVEKAGFKGVVLGLSGGIDSAVVAYLAVKALGKENVLALLMPYRVSPPEDLEDALLVAERLGIEY 86 (264)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCE
T ss_conf 89999999999999999980998099979868889999999998549660689989899998878999999999869984
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 26775899999886313234687431011012330466779888751695443643244775411023666555401017
Q gi|254780999|r 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLK 430 (562)
Q Consensus 351 ~~i~I~~~~~~~~~~~~~~~~~~~~~~~~eN~qaR~R~~~L~~~an~~~~lvl~t~nksE~~~Gy~T~~GD~~g~~~p~~ 430 (562)
T Consensus 87 ~~i~I~~~~~~~~~~~~~-----~~~~~~~NiqaR~Rm~~Ly~~An~~~~lVlgTgNksE~~~Gy~TkyGD~~~d~~Pi~ 161 (264)
T PRK13980 87 KVIEITPIVDAFFSAVPD-----ADRLRRGNIMARTRMVLLYDYANRDNRLVLGTSNKSELLLGYFTKYGDGAVDINPIG 161 (264)
T ss_pred EEEECHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCCCCCCHHHHC
T ss_conf 998279999999986310-----006688875898999999998643397765588674798721001687665624525
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCHHHHHH-
Q ss_conf 763365899999963103322234444668878828898845389997700068-878899999999827999779871-
Q gi|254780999|r 431 DLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQ- 508 (562)
Q Consensus 431 ~l~Kt~v~~la~~~n~~~~~~~~~~~~~~ip~~i~~~~psaeL~~~Q~ded~l~-~Y~~lD~il~~~i~~~~~~~~~~~- 508 (562)
T Consensus 162 dL~Kt~V~~La~~l~--------------vP~~Ii~k~PSa~L~~~Q~DE~~LG~~Y~~lD~iL~~~ie~~~~~~~i~~~ 227 (264)
T PRK13980 162 DLYKTQVRELARHLG--------------VPEDIIEKPPSADLWEGQTDEDELGFSYEEIDEILYALFDKKMPREEILAQ 227 (264)
T ss_pred CCCHHHHHHHHHHHC--------------CCHHHEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 873999999999939--------------966440369997767999987771999999999999999769999999987
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
Q ss_conf -8999999999999987456687389702472645378
Q gi|254780999|r 509 -EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR 545 (562)
Q Consensus 509 -~~~~~~v~~~~~~~~~~~~KR~~~pp~~~is~~sfg~ 545 (562)
T Consensus 228 ~g~~~~~v~~i~~~~~~se~KR~-~Pp~~kis~~~fg~ 264 (264)
T PRK13980 228 LGIDEELVDRVRRRVQRSQHKRR-MPPIAKISGRTIGI 264 (264)
T ss_pred CCCCHHHHHHHHHHHHHCCCCCC-CCCCCEECCCCCCC
T ss_conf 19899999999999985402337-99943151776789