HHsearch alignment for GI: 254780999 and conserved domain: TIGR00268

>TIGR00268 TIGR00268 conserved hypothetical protein TIGR00268; InterPro: IPR005232 This family of conserved hypothetical proteins has no known function but is predicted to be part of the wider PP-loop superfamily ..
Probab=99.22  E-value=4.4e-11  Score=91.69  Aligned_cols=213  Identities=23%  Similarity=0.342  Sum_probs=135.2

Q ss_pred             HHHHHHH-CCCCEEEEECCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCCC-CCHHHHHHHHHHHCCCCCCCCHHHHH-
Q ss_conf             8887642-24540575215872368999999841495446797324666652-21356999999721354267758999-
Q gi|254780999|r  283 LRDYVQK-NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP-QSLEDAAACAKALGCKYDVLPIHDLV-  359 (562)
Q Consensus       283 l~d~~~~-~g~~~~viglSGGiDSal~a~la~~alg~~~v~~~~mp~~~~s~-~s~~~a~~la~~lg~~~~~i~I~~~~-  359 (562)
T Consensus         5 L~~fl~~kf~nk~~~IAySGGvDS~lla~v~~~v~g~-~~lait~~sP~~sp~~el~~A~~~A~~~g~~he~~~~d~~~n   83 (263)
T TIGR00268         5 LRNFLKEKFKNKKVLIAYSGGVDSSLLAAVCSDVAGT-EVLAITVVSPSISPRRELEDAKAIAKEIGVKHELVKIDKMAN   83 (263)
T ss_pred             HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHH-CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCC
T ss_conf             8889876764081699951746589999999875310-113578762775735448999999988083012110012368


Q ss_pred             HHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCC-EECCCCCHHHHH---HHHCCCCCCCCCCCCCCCC--CC
Q ss_conf             99886313234687431011012330466779888751695-443643244775---4110236665554010177--63
Q gi|254780999|r  360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA-MLLTTSNKSEIS---VGYGTLYGDMSGGFNPLKD--LY  433 (562)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~~~eN~qaR~R~~~L~~~an~~~~-lvl~t~nksE~~---~Gy~T~~GD~~g~~~p~~~--l~  433 (562)
T Consensus        84 ~~f--------~~N~~~RCY-~CK-~~~~~~L~~~a~~~gy~~V~dGtN~dDL~~~RPG~~A~-~E~~g~~SP~aef~I~  152 (263)
T TIGR00268        84 PNF--------RANVEERCY-FCK-KKVLSILVKLAEKRGYDVVVDGTNADDLEDHRPGLRAV-KELNGVYSPWAEFGIT  152 (263)
T ss_pred             CCC--------CCCCCCCCH-HHH-HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHH-HHCCCCCCCCCCCCCC
T ss_conf             500--------168854441-548-88999989999863995798234620002367513567-6607886872002568


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCC----CC-CCCCCCCCHHHHH-HHHHHHHHCCC---CHH
Q ss_conf             365899999963103322234444668878828898845389----99-7700068878899-99999982799---977
Q gi|254780999|r  434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----HQ-TDQESLPPYPILD-DIIKRIVENEE---SFI  504 (562)
Q Consensus       434 Kt~v~~la~~~n~~~~~~~~~~~~~~ip~~i~~~~psaeL~~----~Q-~ded~l~~Y~~lD-~il~~~i~~~~---~~~  504 (562)
T Consensus       153 K~eir~ia~~lg~----------------~~~DKP~~~CL~sR~p~g~EI~~ekL~~v~eaE~~~l~~~g~~qvRVR~y~  216 (263)
T TIGR00268       153 KKEIREIAKSLGL----------------SFYDKPSEACLASRFPFGEEIDVEKLKKVDEAEEIVLRRAGVKQVRVRNYD  216 (263)
T ss_pred             HHHHHHHHHHCCC----------------CCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf             7999999997488----------------988886621021047687510489877699999999998356605765267


Q ss_pred             HHH-HCCCHHHHHHHHHHHH
Q ss_conf             987-1899999999999998
Q gi|254780999|r  505 NND-QEYNDETVRYVEHLLY  523 (562)
Q Consensus       505 ~~~-~~~~~~~v~~~~~~~~  523 (562)
T Consensus       217 nlAviE~~~~~l~kl~~~~~  236 (263)
T TIGR00268       217 NLAVIEVAEDELSKLLNEAE  236 (263)
T ss_pred             CEEEEEECHHHHHHHHHHHH
T ss_conf             65799628588999986313