HHsearch alignment for GI: 254780999 and conserved domain: TIGR03108
>TIGR03108 eps_aminotran_1 exosortase 1 system-associated amidotransferase 1. The predicted protein-sorting transpeptidase that we call exosortase (see TIGR02602) has distinct subclasses that associated with different types of exopolysaccharide production loci. This model represents a distinct clade among a set of amidotransferases largely annotated (not necessarily accurately) as glutatime-hydrolyzing asparagine synthases. Members of this clade are essentially restricted to the characteristic exopolysaccharide (EPS) regions that contain the exosortase 1 genome (xrtA), in genomes that also have numbers of PEP-CTERM domain (TIGR02595) proteins.
Probab=98.30 E-value=7.2e-06 Score=57.56 Aligned_cols=136 Identities=15% Similarity=0.117 Sum_probs=77.2
Q ss_pred HHHCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 64220203588876422454057521587236899999984149544679732466665221356999999721354267
Q gi|254780999|r 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 (562)
Q Consensus 274 ~~~~Alvlgl~d~~~~~g~~~~viglSGGiDSal~a~la~~alg~~~v~~~~mp~~~~s~~s~~~a~~la~~lg~~~~~i 353 (562)
T Consensus 242 ~~~~ll~~sV~~rl~s--DVpvG~~LSGGlDSS~I~a~~~~~~-~~~i~tfsi~f~~~~~DE~~~A~~vA~~~g~~h~~~ 318 (628)
T TIGR03108 242 ELIERLREAVRSRMVA--DVPLGAFLSGGVDSSAVVALMAGLS-DTPVNTCSIAFDDPAFDESAYARQVAERYGTNHRVE 318 (628)
T ss_pred HHHHHHHHHHHHHHCC--CCCEEEEECCCCCHHHHHHHHHHHC-CCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEE
T ss_conf 9999999999998057--8856876468863689999999842-998643665348887543699999998608764799
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHCCC
Q ss_conf 75899999886313234687431011012330466779888751695443643244775411023
Q gi|254780999|r 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 (562)
Q Consensus 354 ~I~~~~~~~~~~~~~~~~~~~~~~~~eN~qaR~R~~~L~~~an~~~~lvl~t~nksE~~~Gy~T~ 418 (562)
T Consensus 319 ~~~~~~~~~~~~~~~~~deP~~d~------s~i~~~~l~~~a~~~vkV~LsG~GgDElF~GY~~y 377 (628)
T TIGR03108 319 TVDPDDFSLVDRLAGLYDEPFADS------SALPTYRVCELARKRVTVALSGDGGDELFAGYRRY 377 (628)
T ss_pred ECCHHHHHHHHHHHHHHCCCCCCH------HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHH
T ss_conf 779899987999999846886667------89999999999864974999667754011585566