HHsearch alignment for GI: 254780999 and conserved domain: cd07584
>cd07584 nitrilase_6 Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.
Probab=100.00 E-value=0 Score=380.59 Aligned_cols=241 Identities=26% Similarity=0.337 Sum_probs=212.5
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHCCHH-HHHHH-HHHHHHHHHHHHHCCCE
Q ss_conf 89999638836889999999999999999859989991664447998445414889-99999-99999999998876978
Q gi|254780999|r 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS-FIQAC-SSAIDTLKSDTHDGGAG 83 (562)
Q Consensus 6 kIal~Q~n~~~gd~~~N~~~i~~~i~~A~~~gadLvvfPEl~LtGY~~~Dl~~~~~-f~~~~-~~~l~~La~~~~~~~i~ 83 (562)
T Consensus 1 riA~~Q~~~~~gD~~~N~~~~~~~i~~A~~~gadlvvfPEl~ltGy~~~~~~~~~~~~a~~~~~~~~~~l~~~a~~~~i~ 80 (258)
T cd07584 1 KVALIQMDSVLGDVKANLKKAAELCKEAAAEGADLICFPELATTGYRPDLLGPKLWELSEPIDGPTVRLFSELAKELGVY 80 (258)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCE
T ss_conf 99999898987899999999999999999887949995877424799578512489876407849999999998870938
Q ss_pred EEEEEEEEEC--CEEEEEEEEEE-CCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCCHHHHHH
Q ss_conf 9999999888--98789999996-99799988777623554333210037788876147647456201111111016899
Q gi|254780999|r 84 IVVGFPRQDQ--EGVLNSVVILD-AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNIC 160 (562)
Q Consensus 84 iivG~p~~~~--~~~yNsa~vi~-~G~il~~y~K~~LP~y~~FdE~r~F~~G~~~~~~~~~g~kiGv~ICeDlw~~~~~~ 160 (562)
T Consensus 81 iv~g~~e~~~~~~~~yNs~~~i~~~G~i~~~yrK~hl~~----~E~~~f~~G~~~~v~~~~~gkiG~~IC~D~~fPe-~~ 155 (258)
T cd07584 81 IVCGFVEKGGVPGKVYNSAVVIDPEGESLGVYRKIHLWG----LEKQYFREGEQYPVFDTPFGKIGVMICYDMGFPE-VA 155 (258)
T ss_pred EEEECCEECCCCCCEEEEEEEECCCCCEEEEEECCCCCC----CCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCH-HH
T ss_conf 999403144899958888999948983898797576676----5212357897310576068467778871678717-99
Q ss_pred HHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCE
Q ss_conf 99971477759931555333580788878899985433704642135688766210486435558985999616777637
Q gi|254780999|r 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 (562)
Q Consensus 161 ~~la~~Gadlii~psASp~~~~k~~~R~~~~~~~a~e~~~~vvy~N~vGg~d~lvf~G~S~I~d~~G~ii~~~~~f~e~~ 240 (562)
T Consensus 156 r~la~~Gadii~~psa~~~~--~~~~~~~~~~arA~en~~~vv~~N~vG~~~~~~~~G~S~iv~p~G~~la~~~~~~e~l 233 (258)
T cd07584 156 RILTLKGAEVIFCPSAWREQ--DADIWDINLPARALENTVFVAAVNRVGNEGDLVLFGKSKILNPRGQVLAEASEEAEEI 233 (258)
T ss_pred HHHHHCCCCEEEECCCCCCC--CCHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCCEE
T ss_conf 99998699899987888886--4379999999999986994899810115899078311489989990967538999889
Q ss_pred EEEEEEECCCCCC
Q ss_conf 9999983352123
Q gi|254780999|r 241 FMTEWHYDQQLSQ 253 (562)
Q Consensus 241 ~i~d~d~d~~~~~ 253 (562)
T Consensus 234 ~~adiDl~~~~~~ 246 (258)
T cd07584 234 LYAEIDLDAIADY 246 (258)
T ss_pred EEEEECHHHHHHH
T ss_conf 9999639999999