HHsearch alignment for GI: 254780999 and conserved domain: pfam02568
>pfam02568 ThiI Thiamine biosynthesis protein (ThiI). ThiI is required for thiazole synthesis, required for thiamine biosynthesis.
Probab=98.39 E-value=4.4e-06 Score=58.96 Aligned_cols=144 Identities=19% Similarity=0.150 Sum_probs=92.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCHHHEEEEEC-CCCCCCCCCHHHHHHHHHHH-------CCCCCCCCHHHHHHHHHH
Q ss_conf 4057521587236899999984149544679732-46666522135699999972-------135426775899999886
Q gi|254780999|r 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIML-PYKYTSPQSLEDAAACAKAL-------GCKYDVLPIHDLVNHFFS 364 (562)
Q Consensus 293 ~~~viglSGGiDSal~a~la~~alg~~~v~~~~m-p~~~~s~~s~~~a~~la~~l-------g~~~~~i~I~~~~~~~~~ 364 (562)
T Consensus 4 gk~l~LlSGGiDSpVAa~lmmkR-G~-~V~~vhf~~~p~~~~~~~~k~~~l~~~l~~y~~~~~~~l~vv~~~~~~~~i~~ 81 (197)
T pfam02568 4 GKVLALLSGGIDSPVAAYLMMRR-GC-RVVALHFINEPGTSEEAIEKVRKLAELLAEYGTSCEGKLVVVDFTKVQKEIIE 81 (197)
T ss_pred CCEEEEECCCCHHHHHHHHHHHC-CC-EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH
T ss_conf 71898866871299999999987-99-79999987999998999999999999999737887544999574999999996
Q ss_pred HHCCCCCCCCCCHHHHCCCCHHHH-HHHHHHHHHCCCEECCCCCH-HHHH-HH----HCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 313234687431011012330466-77988875169544364324-4775-41----10236665554010177633658
Q gi|254780999|r 365 LMSQFLQEEPSGIVAENIQSRIRG-NILMALSNHSKAMLLTTSNK-SEIS-VG----YGTLYGDMSGGFNPLKDLYKTQV 437 (562)
Q Consensus 365 ~~~~~~~~~~~~~~~eN~qaR~R~-~~L~~~an~~~~lvl~t~nk-sE~~-~G----y~T~~GD~~g~~~p~~~l~Kt~v 437 (562)
T Consensus 82 ~~~~~----~~-----cv~cKr~M~r~A~~iA~~~ga~~IVTGEsLGQVaSQTl~nl~~i~~~~~~pilRPLig~DK~EI 152 (197)
T pfam02568 82 KAPEK----YR-----CVLCKRCMYRAAEKVAEEEGADALVTGESLGQVASQTLDNLRVISAATNLPILRPLIGLDKEEI 152 (197)
T ss_pred CCCCC----CE-----EHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHH
T ss_conf 28987----65-----4569999999999999984998998473031210045310699987624853134346999999
Q ss_pred HHHHHHHHHC
Q ss_conf 9999996310
Q gi|254780999|r 438 FQLASWRNSH 447 (562)
Q Consensus 438 ~~la~~~n~~ 447 (562)
T Consensus 153 i~~Ar~IGt~ 162 (197)
T pfam02568 153 INLAKEIGTY 162 (197)
T ss_pred HHHHHHHCCH
T ss_conf 9999994867